##maf version=1 scoring=roast.v3.3 a score=2757.000000 s hg38.chr3_KI270935v1_alt 0 10 + 197351 CATTATAATA s panTro4.chr3 623274 10 - 202329955 cattataata i panTro4.chr3 N 0 C 0 s nomLeu3.chr11 120754873 10 + 123690457 cattataata i nomLeu3.chr11 N 0 C 0 a score=744485.000000 s hg38.chr3_KI270935v1_alt 10 1481 + 197351 ---AAAACCTTTAAATGCTCTGAGTGCCCAGCGTCAGCATGGTGATAACATACATACGAGGGAATATTGTGCAGCTGCAGTTAGTTCTTATTACATTTCACAGGCATCTTAAATGCTTTGTGAACACCGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTG-AAATAATAAAAAAAA-TGGACATATAATTTTAAAAATATTGAGTGACAGAAAAAAATGAAAAAATG-TTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCGTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGGCTTGCCTGGCCCGTGGGTGGGAATTGTGG----TGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCATCCTCACCACCCCATGGCCTCCATGGAGCCCCAC-GGCAGCCTCAGGAAGGAGGGCAGTATCGTCAGAACACAGTCCTCATGGACCCCCCAAGAGACCCTTGGGCAGAATGCCCCATCCCACCCAGGTCCAGCTTCACTCAGCACGTAAACAGGAACACGGCTGCAGGCAGGCTCCACGCACCCCGTCCCCAGGGAAGCCGCAGCCCTCGTCCCACGTATCCCGGGCAGGCATCTGTAACTGAGGGCTGCGTGGTCGGGTGAGCAGCGAGGCACATGCTGGCTGGGCGGGGAGGGGCGGCCCTGAGTGGTCGTCTTGCTCAGTGCTAGAGGGGCTCTGAGCCGAAGGTCTGAGGGtcctggagctgccatggcagatccccacagtctcggcagctcaaaacaacagggactcattctctccccgctcagcagggaggggtctgaaatc---gagtccatgggccgtgctccctccagaggctccaggggaggaccctgccacctccaccagcttctgtggctccaggcgtccctgggccgcggccacaatgctgcacctctgcctcggtctccaggcgacctcctcctctgtctgcgtctaacctccctctg-----------------------------------------------------------------cctctgtgtaaggacacttgccgtgcatgtagggccaacgagttaatccagaatgacctccttatctcaagatctttaacttaaacacagccacaaagacctgcctcctatttgaagagaggttctctgcacagttccagggtcaggaggtgaacaccAGGTGGCCCAGCCTCAGCCACCCCAGTGATGATGTGTGAGGTTTCAGAACAGCTGTGCTGCCCTGTTAGGAGCTATACACGCAGAAAGGCAACTCCGCCAGCGTCAGGGGTGCCGGATGCATGC-AGGATCAGAAGGCGTCGGATTTCCCAGGGAAGCTGGGGAGCAAGGATCCTGCACCAAGGGAGGCAGGAGGCCGGAGA----------------------CCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGAGCCTCC-GTGACCCAGCCCTGGAGGGTCAGCACTG--------TCCCTCAAACGGATTCT s panTro4.chr3 623284 1481 - 202329955 ---aaaacctttaaatgctctgagtgcccagcatcagcatggtgataacatacatacgaaggaatattgtgcagcTGCAGTTAGTTCTTATTACATTTCACAGGCATCTTAAATGCTTTGTGAACACCGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTG-AAATAATAAAAAAAAATGGACATATAATTTTAAAAATATTGAGTGACAGAAAAAAATGAAAAAATG-TTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCGTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGCCTTGCCTGGCCCGTGGGTGGGAATTGTGG----TGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCGTCCTCACCACCCCATGGCCTCCATGGAGCCCCAC-GGCAGCCTCAGGAAGGAAGGCAGTATCGTCAGAACACAGTCCTCATGGACCCCCCAAGAGACCCTTGGGCAGAATGCCCCATCCCACCCAGGTCCAGCTTCACTCAGCACCTAAACAGGAACACGGCTGCAGGCAGGCTCCACGCACCCCATCCCCAGGGAAGCCGCAGCCCCCGTCCCACGTATCCTGGGCAGGCATCTGTAACTGAGGGCTGCGTGGTCGGGTGAGCAGCGAGGCACATGCTGGCTGGGCGGGGAGGGGCAGCCCTGAGTGGTCGTCTTGCTCAGTGCTGGAGGGGCTCTGAGCCGGAGGTCTGAGGGtcctggagctgccatggcagatccccacagtctgggcagctcaaaacaacagggactcattctctccccgctcagcagggaggggtctgaaatc---gagtccacgggccgtgctccctccagaggctccaggggaggaccctgccacctccaccagcttctgtggctccaggcgtccctgggccgcggccgcactgctgcacctctgcctcggtctccaggcggcctcctcctctgtctgcgcctaacctccctctg-----------------------------------------------------------------cctctgtgtaaggacacttgccgtgcatgtagggccaacg-gttcatccagaatgacctccttatctcaagatctttaacttaaacacagccacaaagacctgcctcctatttgaagagaggttctctgcacagttgcagggtcaggaggtgaacaccAGGTGGCCCAGCCTCAGCCACCCCAGTGAGGACGTGTGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGCTATACACGCAGAAAGGCAACTCCGCCAGCGTCAGGGGTGCGGGATGCATGC-AGGATCAGAAGGTGTCGGATTTCCCAGGGAAGCTGGGGAGCAAGGATCCTGCACCAAGGGAGGCAGGAGGCCGGAGA----------------------CCAGCCCAGGCCCAGTCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACGGGAGCCTCC-GTGACCCAGCCCTGGAGGGTCAGCACTG--------TCCCTCAAACGGATTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199646266 1569 + 202140232 ---aaaacctgtaaatactctgcgtgcccagcgtcagcatgatggtaacgtgcatacgagggaatattgtgcggcTGCAGTTAGTTCTTATTACATTTCATAGGCATCTTAAATGCTTTGTGAACACTGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGCA-AAATAATAAA------TGGACATGTAATTTAAAAAATACTGAGTGACAGAAAAAAATGAAAAAATGTTTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCCTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGCCTTGCCTGGCCCGTGGGTGGGAATTGTGGTGCTTGCTCCAAGTGCCTTCAGCTGCTGCTGGGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCTGTCCTCATCACCCCATGGCCTCCGTGGAGCCCCACGGGCAGCCTCAGGAAGGAGGGCAGTATCATCAGAACAGAGTCCTCGTGGA-CCCCCAAGAGACCCTTGGACAGAATGCCCCATCCCACCCACGTCCAGCTTCACTCGGCACCTAAACAGGAGCATGGCCGCAGGCAGGCTCCACGCACCCCATCCCCAGGGAAGCCGCAGCCCCCGTCCCACGCATCCCGGGCAGGCATCTGTAACTGAGGGCAGTGTGGTCGGGTGAGCAGCAAGGCACATGCCAGCTGGGCGGGGAGGGGCGGCCCTGAGTGGTCTTCTTGCTCAGTGCTGGAGGGGCTCTGAGCCGAGGGTCCGAGGGtcctggaactgccatggcagatccccacagcctgggcaactcgaaacaacaggggctcattctctccccgctcagcagggaggggtctgaaatcaaggagtccatgggccgtgctccctccagaggctccaggggaggaccctcccacctccgccagcttctgtggctccaggcatccctgggccgcggctgcattgctgcacctctgcctcagtctccaggaggcctcctcctctgtctgcatctaacctccctctgcctctgtgtaaggacacttgccatgcgtttagggccaatgggttaatccagaatgacctccttatcctctgtgtaaggacacttgccatgcatttagggccaacgggttaatccagaatgacctccttatctcaagctctttcacttaatcatggccacaaagacacgcctcctatctgaagagaggttctgtgcacagttccagggtcaggaggtgaacaccCAGTGGCCCAGCCTTAGCCACCCCAGTGAGGACGTGCGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGTTATATACGAAGAAAGGCAACTCCGCTGGCGTCAGGGGTGCTGGATGCGTGC-GGGATCAGATGGCATCAGATTTCCCAGGGAAGCTGGGGAGCAAGGGCCCTGCACCAAGGGAGGCAGGAGGCCGGAGA-----------ccagcccaggcccagcccaggcccagtccaggAGAAGCCTGGCCAGGAGTCCCATCAAAGCCACTGGAGCCTCCAGTGACCCAGCCCTGGAGGGTCAGCACAGCCTGACCATCCATCAAATGGATTCC i ponAbe2.chr3 N 0 C 0 s nomLeu3.chr11 120754883 1492 + 123690457 aagaaaacctgtaaatactctgagtgcccagcatcagcatggtgataatgtacatatgagggaatattgtgcagcTTCAGTTAGTTCTTATTACATTTCATAGGCATCTTAAATGCTTTGTGAACACCGGTGCATAGATTTTTTTGTTTGGTATAGATGGCAATGATTAGATGGGTGCAAGTAATTAAAAAA--TGGACATATAATTTTAAAAATATTGAGTGACAGAAAAAAAGGAAAAAATG-TTAAAGAACTTTTTGGTTATGATATTATCACTAAAAGGCCCTGTCTCCTTGCTCCCTTCTTTGGGGACGGTTCTGGCCTTGCCTGGCCCGTGGGTGGGAATTATGG----TGCTTCAAGTGCCTTCAGCTGCTGCT-GGGTCCCAGGAGCCCAGCCTAGGTGTTCTTCCGTCCTCACCACCCCATGGCCTCCATGGAGCCCCACGGGCAGCCTCAGGAAGGAGGGCAGTATCGTCAGAACAGAGTCCTCGTGGA--CCCCAAGAAACCCTTGGACAGAATGCCCCATCCCACCCAGGTCCAGCTTCACTCAGCACCTAAACAGGAGCACGGCTGCAGGCAGGCTCCACGCACCCCATCCCCAGGGAAGCCGCAGCCCCTGTCCCATGTATCCCGGGCAGGCATCTGTAACTGAGGGCAGCGTGGTCGGGTGAGCAGCGAGGTACACGCTGGCTGGGCGGGGAGGGGTGGCCCTGAGCAGTCATCTTGCTCAGTGCTGGAGGGGTTCCGAGCCGAAGGTCCGAGGGtcctggaactgccatggcagatccccacagcctgggcagctcgaaacagcaggggctcattctctccccactcagcagggaggggtctgaaatcaaggagtccacgggctgtgctccctccagaggcttcaggggaggaccctcccacctccgccagcttctgtggctccaggcgtccctgggccgcagccgcattgctgcacctctg-----------------ccttctgctctgtctgcgtctaacctccctctg-----------------------------------------------------------------cctctgtgtaaggacacttgccatgcatttagggccaacgggttaatccagaatgacctccttatctcaagatctttaacttaatcacagccacaaagacctgcctcctatttgaagagaggttctgtgcatggttccagggtcaggaggtgaacacctggtggcccaGCCTCAGCCGCCCCAGTGAGGACGTGCGAGGTTTCAGAACGGCTGTGCTGCCCTGTTAGGAGTTATACACGCAGAAAGGCAACTCCGCCAGCATCAGGGGTGCTGGATGCGTGCGGGGATCAGATGGCGTTGGATTTCCCAGGGAAGCTGGGGAGCAAGGGTCCTGCATCAAGGGAGGCAGGAGGCCAGAGAccagcccaggcccagcccaggcccagcccaggcccagcccaggAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGAGCCTCCAGTGACCCAGCCCTGGAGGGTCAGCACTG--------TCCCTCAAACGGATTCC i nomLeu3.chr11 C 0 C 0 a score=2321.000000 s hg38.chr3_KI270935v1_alt 1491 9 + 197351 TCACACACA s panTro4.chr3 624765 9 - 202329955 TCACACACA i panTro4.chr3 C 0 I 480 s nomLeu3.chr11 2933283 9 - 123690457 TCGCACACA i nomLeu3.chr11 n 0 C 0 e ponAbe2.chr3 199647835 0 + 202140232 C a score=7073.000000 s hg38.chr3_KI270935v1_alt 1500 29 + 197351 GGTCTCTCTGTCTGTGGGGGCTGCAGGGC s panTro4.chr3 625254 29 - 202329955 GGTCTCTCTGTCTATGGGGGCTGCAGGGC i panTro4.chr3 I 480 C 0 s nomLeu3.chr11 2933292 29 - 123690457 GGTCTCGCTGTCTGTGGAGGCTGCAGGCC i nomLeu3.chr11 C 0 n 0 e ponAbe2.chr3 199647835 0 + 202140232 C a score=1855.000000 s hg38.chr3_KI270935v1_alt 1529 19 + 197351 CAGTGCCTGAGGAGCCCGG s panTro4.chr3 625283 19 - 202329955 CAGTGCCTGAGGAGCCCGG i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 199647835 0 + 202140232 C e nomLeu3.chr11 2933321 0 - 123690457 I a score=429513.000000 s hg38.chr3_KI270935v1_alt 1548 851 + 197351 ACTTCACACAGGGGTCTCTCTGTCTGTGGGGGCTGCAGAGCCGGTGCCTGGGGAGCCCGGACTGCCGGAAACCTTTGCGGTGGGAGGCTGCAGATGGGACTTCTTGGCCTGTGTTTATGTGGAGCCCAGGCTGCGGGCACCACAGCCAGGCACAGGTCAGGGGTAAGTTGTGGGTGATGTAAGGACTAGAAGCGTAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGCGGTGGGAAAGACATGGGCTCCGGCGGCTGCTGGGGATGGCCTGGCTTGCACCTGCTGGGTCCCCCCCTGGCCACCAGCCTCACCCAAGGGCAGTTGGTGACTGCCTGCCTCACTCCTGCCAACCCTCAGGGGCCTAGGAGTCCTGCGTGGTGGGTCTAGGAACCATGCTGGAGGACAGGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCCGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGATCCTCAGCCCAGGAAAGGGACCAGAGGCGGGAAAACCACACGGCAAAGGCTGTCCCGTGAGGTCACGGCTCCGTCACCGCTGCCCACACACGGAAGGCAGCCGCGGCTGGGTGAAGCCATCTTCACAGACATGCCGTCCTTGAGGCTCTCACACATGCACACAGACGCTCCGTCCTCTCC--CACCCGCCCCC-CCGCCACCCCGGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGCCCAGGCATCGGGGCCTGAAGCCTCCACAGACAGCGAGACCTGTGTACGAAGCAGACTCTGTCCTAGGGACAGTGCTGACCCTACAAGGCTGGGTCAC s panTro4.chr3 625302 853 - 202329955 ACTTCACACACAGGTCTCCCTGTCTGTGGGGGCTGCAGGGCCGGTGCCTGGGGAGCCCGGACTGCCGGAAACCTTTGGGGTGGGAGGCTGCAGATGGGACTTCCTGGCCTGTGCTTATGTGGAGCCCAGGCTGCGGGCACCACAGCCAGGCACAGGTTAGGGGTAAGTTGTGGGTGATGTAAGGACTAGAAGTGTAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGCAGTGGGAAAGACATGGGCTCCGGCGGCTGCTGGGGATGGCCTGGCTTGCACCTGCTGGGTCCCCCCCTGGCCACCAGCCTCACCCAAGGGCAGTTGGTGACTGCCTGCCTCACTACTGCCAACCCTCAGGGGCCTAGGAGTCCTGCGTGGTGGGTCTAGGAACCATGCTGGAGGACAGGCCTGTGCCAGGGCCACCAGGATATCTATGGCAGGAGCTGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGCTCCTCAGCCCAGGAAAGGGATCAGAGGCGGGAAAACCACACGGCAAAGGCTGTCCCATGAGGTCACGGCTCCGTCACTGCTGCCCACACACGGAAGGCAGCCGCGGCTGGGAGAAGCCATCTTCACAGACATGCCGTCCTTGAGGCTCTCACACATGCACACAGACGCTCCGTCCTCTCCCACACCCGCCCCC-CCGCCACCCCGGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGCCCAGGCATCGGGGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGAAGCAGACTCTGTCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCAC i panTro4.chr3 C 0 I 132 s ponAbe2.chr3 199647835 846 + 202140232 ACTTCACACACAGGTCTCCCAGTCTGTGGGGGCTACAGGGCCGGTGCCTGGGGAGCCCGGACTGCCGGAAACCTTTGGGGTGGGAGGCTCCAGATGGGACTTCCTGGCCTGTGTTTATGTGGAGCCCAGGCTGCAGGTGCCACAGCCAGGCACAGGTTAGCGGTGAGTTGTGGGTGATGTAGGGACTAGAAGCTCAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGCGGTGGGAAAGACATGGGCTCGGGCAGATGCTGGGGGTGGCCCGGCCTGCACCTGCTGGGTCCACCCCTGGTCACCAGGCTCACCCAAGGGCAGTTTGTGACTGCCTGCCTCACTCCTGCTGACTCTCAGGGGCCTAGG-GTCCCACGTGGGGGGTCTAGGAACCATGCTGGAGGATGTGCCTGTGCCAGGGCCACCAGGATATCTATGGCAGGAGCTGGTGCTGGTGAACCCCACACCTTGAGCCCCAGAGCCAGGCTCCTCAGCCCAGGAAAGGGATCAGAGGTGGGAACACCACATGGCAAAGGCTGTCCCGTGCAGTCATGGCTCCACCACCACTGCCCACACACAGAAAGCAGCCGCGGCTGGGAGAAGCCATCTTCACAGACATGCCATCCTTGAGGCTCTCACACGTGCGCACAGACACTCTGTCCTCTCC------CACCCCC-CCACCACCCCAGGCAGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCCGAGGGTTGCCGTCAGTCCGTG-TGTCCAGGCATCGGGGTCTGCAGCCTCCACAGACAGCGAGACCTGTGTGTGAAGCAGAATCCATCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120756375 847 + 123690457 ACTTCACACACAGGTCTCCCTGTCTGTGCGTGCTGTAGGGCTGGTGCCTGGGGAGCCGGGACTGCCAGAAACCTTCAGGGTGGGAGGCTCCAGATGGGACTTCCTGGCCTGTGTTTATGTGGAGCCCAGGCTGCAGGTGCCACAGCCAGGCACAGGTTAGGGGTGAGTTGTGGGTGATGTAGGGACTAGAAGCACAAGTAATGGCCTGACCCCCATGTCCTGGCTGTGCTGTGTGGTGGGAAAGACACAGGCTCCGGTGGCTGCTGAGGGTGGCCTGGCCTGCACCTGCTGGGTCCACCCCTGGCCACCAGGCTCACCCAAGGGCAGTTGGTGACGGCCTGCCTCACTCCTGCTGACCCTCAGGGGCCTAGGGGTCCCGCGTGAGGGGTCTAGGAACCATGCTGGAGGACGTGCCTGTGCCAGGGCCACCAGGATGTCTATGGCAGGAGCCGGTGCTGGCGAACCCCACACCTTGAGCCCCAGAGCCAGGCTCCTCAGCCTAAG-AAGGGATCAGAGGCGGGAAAACCACATGGCAAAGGCTGTCCCGTGCAGTCCTGGCTCCACCACCACTGCCCACACACGGAAGGC-GCCGCGGCTGGGAGAAGCCATCTTCACAGACATGCCATCCTTGTGGCTCTCACGCATGTGCACAGACGCTCCGTCCTCTCC------CACCCCCAACCCCACCCCGGGAGGGCCAGGAAGTCCCATCTGGGGCCTCCCACCCTGAGGGTTGCCTTCAGTCCGTGCTGCCCAGGCATCGGGGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGAAGCAGAATCCATCCTAGGGACAGTGCTGACCCTCCAAGGCTGGGTCAC i nomLeu3.chr11 C 0 C 0 a score=414747.000000 s hg38.chr3_KI270935v1_alt 2399 793 + 197351 TGGAGGCTCCCCGGGTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGGCCGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGGAGCACCCTTGCTCCCCAGCACCTCCCAGGTTCACACAGCTCCTCCCTGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCGGTGGACTGAAGACCTTGTCCGAAGGGAAAGCAGGGCCGGCCCAAGGCCTGGCTGGAAGAGTGGGTCTTGGTGGCAAAGGCGGCCCGTGGGGGCAGCCCACGCGAATGCTTCCCCGGCGCCCTGAGCCCCTGACCGCGGCTGAGCCTGCGGTACTCTGGCCCCTCTCGTGGAAAGATGACCTGGGTCTACCATGCTCAGTATCACCCAAAAATTCCTACAGAAGTCTCTCGGGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTTTCCTCTTCCTTTCTTTCATCAGGG---AACAGCTTCCGGCTGCCTGCACTGTTTGGGCGCCGTCATAAGGAGCCGTGACGGCCTTCACAGAGCTCCGGGGCTCACGGGTGTGGCTGACCTG-CCACAAATGGGGCGACAGAGGAGAGGGAGGGTCGGGCACCGATGGCTCAGGAGGGAAGAGATCCCTTCTGTATGGGGAGACGGGGGCTTCCTGGAGGGCACTGGAGCGAGGGGCTCACCAGAGTGAGACATCCAAGGGATCTGGGGGACCGGCCATGGGACACTGCGGTCCCACGTGGCTCCTGGATGTGCTGTGTGTTTGCTGAGCTGGAGGGGACGGGGAGCC s panTro4.chr3 626287 793 - 202329955 TGGAGGCTCCCCGGGTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGGCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGGAGCACCCTTGCTCCCCAGCACCTCCCAGGTTCACACAGCTCCTCCCTGGGGCTGCGCACTGACCCAGGGGCAGCAGGTGGGCCATCCTCTCCGTGGACTGAAGACCTTGTCCGAAGGGAAAGCAGGGCCGGCCCAAGGCCTGGCTGGAAGAGTGGGTCTTGGTGGCAAAGGCGGCCCGTGGGGGCAGCCCACGCGAATGCTTCCCCGGCGCCCTGAGCCCCTGACCGCGGCTGAGCCTGCAGTACTCTGGCCCCTCTCATGGAAAGATGACCTGGGTCTACCATGCTCAGTATCACCCAAAAATTCCTACAGAAGTCTCTCGGGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTTTCCTCTTCCTTTCTTTCATCAGGG---AACAGCTTCCGGCTGCCTGCACTGTTTGGGCGCCATCTTAAGGAGCCGTGACAGCCTTCACAGAGCTCTGGGGCTCACGGGTGTGGCTGACCTG-CCACAAATGGGGCGACAGAGGAGAGGGAGGGTCGGGCACCGATGGCTCAGGAGGGAAGAGATCCCTTCTGTATGGGGAGACGGGGGCTTCCTGGAGCGCGCTGGAGCGAGGGGCTCACCAGAGTGAGACATCCAAGGGATCTGGGGGACCGGCCATGGGACACTGTGGTCCCACGTGGCTCCTGGATGTGCTGTGTGTTTGCTGAGCTGGAGGGGACGGGGAGCC i panTro4.chr3 I 132 C 0 s ponAbe2.chr3 199648681 795 + 202140232 TGGAGGCTCCCCGGGTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGGCTGGGCAGGTCTCTGGCCTCCTGCCTTCCTTGGTGGAGCACCCTTGCTCCCCAGCACCTCCCAGGTTCACACAGCTCCTCCCTGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCCATGGACTGAAGACCTTGTCCGAAGGGAAAGCAGGGCCGGCCCAAGGCCTGGCTGGAAGAGCCGGTCTTGGTGGCAAAGGCGGCTCGTGAGGGCAGCCCATGCAAATGCTTCCCTGGGGCCCTGAGCCCCGGACCGTGGCTGAGCCTGCTGTACTCTGGCTCCTCTCATGGAAAGATGACCTGGGTCTACCAGGCTCAGTATCACCCAAAAATTCCTACAGAAGTCTCTTGGGACAAGAAAAGGCCTTCTTCCCTCCCTCTTCCTTTCCTCTT-CTTTCTTTCATCAGGGAAAAACAGCTTCCAGCCGCCTGCACTGTTTGGGCACCGTCATAAGAAGCCGTGACGGCCTTCGCAGAGCTCCGGGGCTCACGGGTGTGGCTGACCTG-CCACAAATGGGGCGACAGAGGAGAGGGAGGGTCGGGCACCGATGGCTCAGGAGGGAAGAGATCCCTTCTGTATGGGGAGATGGGGGCTTCCTGGAGGGAGCTGGAGCGAGGGGCTCACCAGGGTGAGACATCCAAGGGAACTGGCGGACCGGCCATGGGACAGTGTGGTCCCACGTGGCTCCTGGATGCGCTGTGTGTTTGCTGAGCTGGAGGGGACAGGGAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120757222 787 + 123690457 TGGAGGCTCCCCGGGTCTAGTGGCTTTGGTGGGACTCCTGACCAGGCTCCTTCCGGGCTGGGCAGGTCTCCGGCCTCCTGCCTTCCTTGATGGAGCACGCTTGCTCCCCAGCACCTCCCAGGTTCACACAGCTCCTCCCTGGGGCTGCGCACTGACCCAGGGGCAGGAGGTGGGCCATCCTCTCCGTGGACTGAAGACCTTGTCCGAAGGGAAAGCAGGGCTGGCCCAAGGCCTGGCTGGGAGAGCCGGTCTTGGTGGCAAAGGCGGCTCGTGGGGGCAGCCCACGCAAATGCTTCCC-GGCTCCCTGAGCCCCTGACCGCGGCTGAGCCCGCTGTGCTT--GCTCCTCTCATGGAAAGATGACCTGGGTCTACCATGCTCAGTATCACCCAGAAATTCCTACAGAAGTCTCTTGGGACAAGAAAAGGCCTTCTTCCCTCCCTCCTCCTTTCCTCTTCCTTTCTTTCATCAGGG---AACAGC-TCCGGCTGCCTGCACTGTTTGGGCACTGTCATAAGAAGCCGTGACGGCCTTCACAGAGCTCCAGGGCTCACGGGTGCAGCTGACCTGCCCACAAATGAGGCGACAGAGGAGAGGGAGGGTCGGGCACCGATGGCTCAGGAGGGAAGAGATCCCTTCTGTATGGGGAGACGGGGGCTTCCTGGAGGGAGCCGGAGCAAGGGGCTCACCAGGGTGAGACATCCAA-GGACCTGGGGGACCAGCCATGGGACACGGTGGTCCCACGTGGCTCCTGGACGCGC--TGTGTTTGCTGAGCTGGAGGAGACGGGGAGCC i nomLeu3.chr11 C 0 C 0 a score=31061.000000 s hg38.chr3_KI270935v1_alt 3192 133 + 197351 CATGT------------------GTGGGAGAGGGAGAGGCCATGCACGCCCTGAGTCGGGCTTTACAAAAACCTTCTGGGGGCAGCAGGAGAGGAGCCACGCAGAGGCAGAGCCAGGGAGAGGCGGTGGGGTAGTGAGGGGGATGTCGGGG s panTro4.chr3 627080 133 - 202329955 CATGT------------------GTGGGAGAGGGAGAGGCTATGCACACCCTGAGTCGGGCTTTACAAAAACCTTCTGGTGGCAGCAGGAGAGGAGCCACGCAGAGGCAGAGCCAGGGAGAGGCGGTGGGGTAGTGAGGGGGATGTCGGGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120758009 150 + 123690457 CACGTGCCAAACGCGGGCACCTCGCGGGAACGGGAGAGGCCATGCACGCCCTGAGTCCGGCTTTACAAAAACCTTCTGGCAGCAGTAGGAGAGGAGACACACAGAGGCAGAGCCAGGGAGAGGCGGTGGGGTAGTGA-GGGGATGTTGGCG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 199649476 0 + 202140232 C a score=65565.000000 s hg38.chr3_KI270935v1_alt 3325 136 + 197351 TGCACGGGTTAGGAGACCCCCGAGTCCTGGGACCTGCATGCTGATAGTCAAGGTTGCAGAGGCGGCTGCTGTGGTGACCACAGGGCAGGGAGAGGCAGTGGGGTAGTGAGGGAATGTCGGGGTGCACAGCACCAGA s panTro4.chr3 627213 136 - 202329955 TGCACGGGTTAGGAGACCCCCGAGCCCTGGGACCTGCATGCTGATGGTCAAGGTTGCAGAGGCGGCTGCTGTGGTGACCACAGGGCAGGGAGAGGCGGTGGGGTAGTGAGGGGATGTCGGGGTGCACAGCACCAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199649476 136 + 202140232 TGCACGGGTTGGGAGACCCCTGAGCCCTGGGACCTGCGCTCTGGTGGTCAAGGTTGCACAGGCGGTGGCTGTGGTGACCACAGGGCAGGGAGAGGTGGTGGGGTAGTGAGGGGATGTCGGGGTGCATGGCACCAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120758159 127 + 123690457 TGCACGGGTTGGGAGACCCCCGAGCCCTGGGACCTGCATGCTGATGGTCAAGGTTGC---------TGCTGTGGCGACCACAGGGCAGGGAGAGGAGGTGGGGTAGTGAGGGGATGTCAGGGTGCAGAGCGCCAGA i nomLeu3.chr11 C 0 C 0 a score=3054.000000 s hg38.chr3_KI270935v1_alt 3461 4 + 197351 CCCT s panTro4.chr3 627349 4 - 202329955 CCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199649612 4 + 202140232 CCCT i ponAbe2.chr3 C 0 I 7370 s nomLeu3.chr11 120758286 4 + 123690457 CCCT i nomLeu3.chr11 C 0 I 8217 s papAnu2.chr6 25618 4 + 174439528 CCAT i papAnu2.chr6 N 0 C 0 a score=41554.000000 s hg38.chr3_KI270935v1_alt 3465 22 + 197351 CCCAGATCTTCTGATTCAGTCC s panTro4.chr3 627353 22 - 202329955 CCCAGATCTTCCGATTCAGTCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199656986 22 + 202140232 CCCAGATCTTCCGATTCAGTCC i ponAbe2.chr3 I 7370 C 0 s nomLeu3.chr11 120766507 22 + 123690457 CCCAGATCTTCTGATTCAGTCC i nomLeu3.chr11 I 8217 C 0 s macFas5.chr6 179960741 22 - 181584905 CCCAGACCTTCCGATTCAGTCC i macFas5.chr6 N 0 C 0 s papAnu2.chr6 25622 22 + 174439528 CCCAGACCTTCCGATTCAGTCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89530590 22 - 91010382 CCCAGACCTTCCGATTCAGTCC i chlSab2.chr4 N 0 C 0 a score=61272.000000 s hg38.chr3_KI270935v1_alt 3487 27 + 197351 TGGGGggaccctaccccagatcttcca s panTro4.chr3 627375 27 - 202329955 TGGGGGGACCCTACCCCAGATCTTCCA i panTro4.chr3 C 0 I 286 s ponAbe2.chr3 199657008 27 + 202140232 TGGAGggaccctaccccagatcttcct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120766529 27 + 123690457 TGGGGggaccctaccccagatcttcct i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179960763 27 - 181584905 TGGGGggaccctaccccagatcttctg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 25644 27 + 174439528 TCGGGGGACCCCACCCCAGACCTTCTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89530612 27 - 91010382 TGGGGggaccctaccccagatcttctg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 170653 27 - 204313951 TGGAGggaccctaccccagaacttcca i calJac3.chr2 N 0 C 0 a score=521162.000000 s hg38.chr3_KI270935v1_alt 3514 245 + 197351 attcagtcctggttcggcctgagaatttgcatttttaacatgtccaggGACCACAGTTTGAAAACCTCCACGGCTGACATGTAATGGGATGACATGGTCCAATAAATGAAGGAAAAATAACAGG-----------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGAACAAAGAATTAAAAAC s panTro4.chr3 627688 245 - 202329955 attcagtcctggttcggcctgagaatttgcgtttctaacatgtccaggGACCACAGTTTGAAAACCTCCACGGCTGACATGTAATGGAATGACATGGTCCAATAAATGAAGGAAAAGTAGCAGG-----------TGGGAACCTCAGGCAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTCAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC i panTro4.chr3 I 286 C 0 s ponAbe2.chr3 199657035 244 + 202140232 attcagtcctggttcggcctgagaatttgcatttctaacgtgtccaggGACCACAGCTTGAAAACCTCCATGGCAGACATGTAATGGGATGACATAGTCCAATAAATG-AGGAAAAATAACAGG-----------TGGCAACCTCAGGCAGCTTCATCCCAACCATTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATGTGGGCATTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120766556 243 + 123690457 attcagtcctggttcggcctgagaatttgcatttctaacatgtccaggGACCACAGCTTGAAAACCTCCATGGCAGACATGTAATGGGATGACATGGTCCAATAAATGAAGGAAAAATAACAGG-----------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATACAGGCGTTTGAGCAAATATTT--GTGTTAGGACAAAGAATTAAAAAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179960790 231 - 181584905 attcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCGGGACAAAGAATTAAAAAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 25671 231 + 174439528 ATTCAGTCCTGAAtcggcctgagaatttgcatttctaacatgtCCAGGGACCACAGTTTTAAAACCTCC-------------AATGGCA-GACATGGTCcaataaatgaaggaataataACAGG-----------TGGCAACCTCAGACAGCTTCATCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCAGgacaaagaattaaaaac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89530639 231 - 91010382 attcagtcctgattcggcctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCC-------------AATGGCA-GACATGGTCCAATAAATGAAGGAATAATAACAGG-----------TGGCAACCTCAGACAGCTTCCTCCCAACCAGTAAGAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGACGTTTGAGCAGACATTTAAGTGTCAGGACAAAGAATTAAAAAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 170680 260 - 204313951 --tcagtcctggttaggcctgagaattggcatttctaacatgcccaggGACCACAGTTTGGAAACCTCTGTGGCAGACATGTAATGGGATGACACGGTCCGATAAACGGGGGAACAACAACAGGTGGAGACCCCCTGGCAACCTCAGGAAGCTTCATCCCAGCCAGTAAGAAAGTAAATCCCCAAGCCTTCTGAAAACTAAGAGT-AGTATTAACACGGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAGC i calJac3.chr2 C 0 I 294 a score=945847.000000 s hg38.chr3_KI270935v1_alt 3759 436 + 197351 TAGCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTG---TTGTGCGTGTGTCTACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGTACTCCAGTAA----TGAGTCATGGAACAATGTTTCATATTGAAAATGTTTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCGTATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATATAAAAAGAAAGTAGAATACTGCCCAGAGAGAAGATGTGGATAATTCCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGAGTAAGATATTCAGACCTGCAC s panTro4.chr3 627933 430 - 202329955 TAGCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTG---TTGTGCGTGT--CTACCGCTTAGGAACACAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGTGCTCCAGTAA----AGAGTCATGGAACAATGCTTCATATTGAAAATGTTTTTGTAAATGTGGGTTTCAGGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATATAAAAAGAAAGTAGAATACTGCCCAGAGAGAAGATGTGGATAATTCCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGT----AAGATATTCAGACCTGCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199657279 428 + 202140232 TAGCACAGGCACCCCTGAAGCATGATAAGTTGGCAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTG---TTGTGTGTGTGTCTACTACTTAGGAACCCAAAACAAACCTTCAGACCATTTTCATGAATACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCAGTAA----TGAGTCATGGAACAATCTTTCATATTGAAAATGTTTTTGTAAATGTGGGTTTCAAGGTTTCAAAGTGAACCCCTATGTGTCaggagaaaggacaaaccgaagaagtaaaataattgggtcaatataa----aaagtagaatatttcccagagagaagatgtggataattcctaacacagatcaaaggcaccaaaaaggtgagctgt----aAGATATTCAGACCAGCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120766799 431 + 123690457 TAGCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGGAGGGCTGATTTAGTTTCCGAGAAATAACTGACAGGCAGTG---TTGTGTGTGTGTCTACTACTTAGGAACCCAAAATAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGGAACTCCACTAA----TGAGTCATGGAACGATGCTTCATATTGAAAATG-TTTTGTAAATGTGAGTTTCAAGGTTTCAAAGTGAACCCGTATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATATAA----AAAGTAGAATATTGCCCAGAGAGAAGATGTGGGTAATTCCTAACACGGTTCAAAGGCACCAAAAAGGTGAGCTGTGAGTAAGATATTCAGACCTGCAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961021 431 - 181584905 TAGCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGAA-GGCTGATTTAGTTTCCAAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTCTACTGCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGAAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATACCAAAAATG-TTTTGTAAATGTGCGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCTATGTAAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACATGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATACTCAGACCTGCAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 25902 434 + 174439528 tagCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGAA-GGCTGATTTAGTTTCCGAGAAATAGCTGACAGgcagtg---ttgtgtgtgtgtctactgCTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACGAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTTATGGTACTCCACTAA----TGAGTCATGGAACCATGTTTCATAccgaaaatg-ttttgtaaatgtggGTTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAGGTAAAATAATTGAGtcaatataaaatgaaagtagAATATTGCCCAGAGAGAAGATGTGGGTAATTGCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGTTTAAGATATTCAGACCCGCAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89530870 431 - 91010382 TGGCACAGGCACCCCTGAAGCATGATAGGATGGCAACAGAA-GGCTGATTTACTTTCCGAGAAATAGCTGACAGGCAGTG---TTGTGTGTGTGTCTACTGCTTAGGAACCCAGAACAAACCTTCAGACCGTTTTCATGAGTACTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGGAGATGTTTATGGTACTCCACTCA----TGAGTCGTGGAACCATGTTTCATACCGAAAACG-TTTTGTAAATGTGGGCTTCAAGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAGTAAAATAATTGGGTCAATATAAAAAGAAAGTAGAATATTGCCCAGAG---ACATGTGGATAATTCCTAACACGGATCAAAGGCACCAAAAAGGTGAGCTGTGTGTAAGATATTCAGACCCGCAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 171234 427 - 204313951 TAGCACAGGCACCCCTGAAGTATGATAGGGTGGCAACGGAAGGGCCAATC-----------GAATAACTGCTGGGCAGCTTCCTTGTGTGTATGTCTACTA---AGGAATCAGAAACAAACCCTCAGACAGTTCTCATGAGTACTGAGACCAAGGAAGCCACTGGGCAGTGGGTGGTCTGAAAA-GTAAATTTTTATAGTGCTCCACTAATTACTGAGTCATAGAACGATGTTTCATATTGAAAATG-TTTTGTAAATGTGGGTTTCAAGGTTTCAAAATGAACCCATGCTTGTTCAGAGAAAGGACAAACCAAAGAAGTAAAATCATTGGGTCAATATAAAAAGAACGTAGAATGTTGCCCGGAGAGAAGGCGTGGATAATTCCTAACACGGATCAAAGGCAGGAAAAAGGTGAGCTGTGTCTGAGATACTCAGACCTGCAC i calJac3.chr2 I 294 I 5724 a score=33978.000000 s hg38.chr3_KI270935v1_alt 4195 21 + 197351 CATCCCCTGCATTAGACACAG s panTro4.chr3 628363 21 - 202329955 CGTCCCCTGCATTAGACACAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199657707 21 + 202140232 CATCCCCTGCAGTAGACACAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120767230 20 + 123690457 CG-CCCCTGCAGTAGACACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961452 21 - 181584905 CGTCCCCTGCAGTAGACACAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 26336 21 + 174439528 CGTCCCATGCAGTAGACACGG i papAnu2.chr6 C 0 I 3205 s chlSab2.chr4 89531301 21 - 91010382 CGTCCCCTGCAGTAGACACAG i chlSab2.chr4 C 0 C 0 e calJac3.chr2 171661 5724 - 204313951 I a score=910.000000 s hg38.chr3_KI270935v1_alt 4216 1 + 197351 A s panTro4.chr3 628384 1 - 202329955 A i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120767250 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179961473 1 - 181584905 A i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89531322 1 - 91010382 A i chlSab2.chr4 C 0 C 0 e calJac3.chr2 171661 5724 - 204313951 I e papAnu2.chr6 26357 3205 + 174439528 I e ponAbe2.chr3 199657728 0 + 202140232 C a score=1328435.000000 s hg38.chr3_KI270935v1_alt 4217 708 + 197351 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTATGAGGATGAAAAAAGTTAGCATTCATGGAATGAGGCACTGACGAAACTGAAAAGCTGGAATAACCCCATGAAATAACGAGAATAATTGTAGTATTCTG-------------AAC-CGGGGCACAGGACACAGGACTGGAGTGGAAGGCCGCATGAGACCAC---------CCCGGGAAAGACCCAGGGATCACACTGGCCCAA---AGGTGGGCACTTCCCAACTCC-GGGATTTGT--------GATACAGGCACTCCAGGCTCCACCATAGAACTGTGTCCAGCACGAAGGCAGTGCTGTCTT-------GCGGGAGGCAGGGCTGCACCACCACA--GGGGCGGGAAGGGGCCCGGCAGGGAGGCG-CCCAGTGTTTCCAGCTGCA--------C-CGGTCGGGGACCGCGCTGATGCAGAGCGCGGGGGCGCAGGTTAAACCTAAAGGAGGGAAGCTTTTG-GGGGCGGAACAGACAACGGAGAACGCTGCACACTGCCCTTCCCACGCGAATTGTGCTTTGCCttttttttt--tttttttttttttttgagacggagttttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcgtcccgagtagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat s panTro4.chr3 628385 703 - 202329955 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTATGAGGATGAAAAAAGTTAGCATTCATGGAATGAGGCACTGAAGAAACTGAAAAGCTGGAATAACCCCATGAAATAACGAGAATAATTGTAGTATTCTG-------------AAC-CGGGGCACAGGACACAGGACTGGAGTGGAAGGCCGCATGAGACCAC---------CCCGGGAAAGACCCAGGGATCACACTGGCCCAA---AGGTGTGCACTTCCCAACTCC-GGGATTTGT--------GCTACAGGCACTCCAGGCTCCACCATAGAACTGTGTCCAGCACGAAGGCAGTGCTGTCTT-------GCGGGAGGCAGGGCTGCACCACCACC--GGGGCGGGAAGGGGCCCGGCAGGGAGGCG-CCCAGTGTTTCCAGCTGCA--------C-GGGTCGGGGACCGCGCTGATGCAGAGCGCGGGGGCGCAGGTTAAACCTAAAGGAGGGAAGCTTTTG-GGGGCGGAACAGACAACGGAGAACGCTGCACACTGCCCTTCCCACGCGAATTGTGCTTTGCCttttttttt--tttttttttt-----gagacggaattttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcgtcccgagtagctgggattacaggcgtgcgccaccaagcccggc---taattttgtat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199657728 697 + 202140232 --ACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTATGAGGATGAAAAAAGTTAGCATTCATGGAATGAGGCACTGAAGAACCTGGAAAGCTGGAATAACCCCATGAAAT------AATAACTGTAGTATCCTG-------------AAC-TGGGGTACAGGACACAGGACTGG-GTGGAAGGCGGCAGGAGACTAC------GCGCACAGGAAAGACCCAGGGATCACAGTGGCCCAA---AGCTGGGCACTTCCCAATTCT-GGGGATAGT--------GCTACAGGCACTCCAGGCTCCACGGTAGAACTGTGTCCAGCACCAAGGCAGTGCTGTCTC-------GGGGGAGGCAGGGCTGCACCACTACT--GGGGTGGGAAGGGGACCCGCAGGGAGGCG-CCCAGTGTTTCCAACTGCA--------CGGGGTCGCGGGCGGCGCTGATGCAGAGCGTGGGGGCGCAGGTTAAACCTAAAGGAGGGAAGCTTTTC-GGGGCAGAACAGACAACGGAGAACGCTGCACACGGCCCTTCCCACCCGAATTGTGttttgccttttttttt--tttttttttt---ttgagatggagttttgc---tgtttcccaggtctggagtgcaacggcctgatctcggctcattgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcttaagtagctgggattacaggtgtgcgccaccacacccgcc---taattttgtat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120767251 702 + 123690457 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTA-GAACTATGAGGATGAAAAAAGTTAGCATTCATGGGATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAGTAATGAGAATAACTGTAGTACCCTG-------------AAC-TGAGGTACGGGACACAGGGCTGACGTGGAAGGCAGCACGAGACTAC------GCGCGCGGGAAAGACCCAGGGATCACAGTGGCCCAA---AGCTGGGCACTTCCCAATTCTGGGGATTTGT--------GCTACAGGCACTCCAGGCTCCACGGTAGAACTGTGTCCAGCACGAAGGCAGTGCTGTCTC-------GGGGGAGGCAGGGCTGCACCACCACT--GGGGCGGGAAGGGGCCCCGCAGAAAGGCG-CCCAGTGTTTCCAACTGCA--------TGGGGTCCAGGGCAGCGCTGATGCAGAGCGTGGGGGAGCAGGTTAAACCTAAAAGAGAGAAGCTTTTC-AGGGTGGAACAGACAACAGAGAACGCTGCACACTGCCTTTCCCACCCGAATTGTGATTTGCCttttttttt--tt-------------gagacggagttttgctcttgttgcccaggcctggagtgcaatggcctgatctcggctcactgcaatctccgcctcccggattcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgtgagccaccgcacccggcctgtttttTTGTGT i nomLeu3.chr11 C 0 I 8 s macFas5.chr6 179961474 722 - 181584905 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAATCCTAGGAACTACGAGGATGAAAAATGTTAGCATTCTTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAATAACCCCATGAAATAATGAGAATAATTGTAGTAGCCTG---TAGTATCCTGAAC-CGGGGCACAGGTCACAGGACTGGGGTGGAAGGCAGCACG-GAGTAC------GCACGCGGG-AAAACCCAGGGATCACAGTGGCCCAA---AGCTGGGCACTTCCCAATTCCGGCGATTGGT--------GCTACAGGCACTCCAGGTTCCACCGCAGAACTGTGTCCAGCACGGAGGCAGTGCTGTCTC-------GGGGGAGACAGGGCTGCACCACCACC-AGGGGCGGGAAGGGGTCAGGCAGGGAGGCG-CCCAGTGTTTCCAGCTGCACTGGGCGCCTGCGTCGGGGGTGGCGCTGATGCAGAGCGTGGGGGCGCAGGCTAAACCTAAAAGAGGGAAGCTTTTG-GGGGCGGAACAGACAAC-------ACTGCACACTGCCCTTCCCACCCGAATTGTGttttaccttttttttttcttttttcttt---ttgagacagagtttctctcttgttgcccaggcctggagtgcaatagcccgatctcggctcactgcaacttcggcctcccgggttcaagcaattctcctgcctcagcctcccgagcagctgggattacaggcgtgcgccaccacgcccggc---taattttatat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 29562 700 + 174439528 CAACATCTTGGCAGGCAAATTAGTGAAAATTCAGAGACAACGCTTGGAACTACGAGGATGAAAAG----AGCATTCGTGGAATGAGGCACTGAAGAACCTGAAAAGCTGGAAAAACCCCACGAAATAATGAGAATAATTGTAGTATCCTGAACcagggcacaggacacaggacacaggacacaggacTGGGGTGGAAGGCGGCA-------------------------AAGACCCAGGGATCACAGTGGCCCAA---AGCTGGGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGCTCCACCGCAGAACTGTGTCCAGCACGGAGGCAGTGCTGTCTC-------GGGGGAGACAGGGCTGCACCATCACCAAGGGGCCGGAAGGGACCGGGCAGGGAGGCG-CCCAGTGTTGCCAGCTGCA--------AGGCGTCGGGGGCGGCGCTGAGGCAGAGCGCCGGGGCGCAGGTTAAACCTAAAGGAGGGAAGCTTTTACGGGGCGGAACAGACAACCGAGA--ACGCTGCACTGTCCTTCCCACCCGAAATgcgttttcccttttttttt--tttttttttt---ttgagacggagtttcgctcttgttgcccaggcctggagtgcaacggcctgatctccgctcactgcaacctccgcctcctggcttcaagcagttctcctgcctcagcctcccgagtagctggga--ataggcgtgcgccaccacccccggc---taattttgtat i papAnu2.chr6 I 3205 C 0 s chlSab2.chr4 89531323 722 - 91010382 CAACATCTTGGTAGGCAACTGGGTGAAAATTCAGAGACAACCCTAGGAACTACGAGGATGAAAAAAGTTAGCATTCATGGAATGGGGCACTGAAGAACCTGAAAAGCTGGAATAACTCCATGAAATAATGAGAATAATTGTAGCAGCCTG---TAGTATCCTGAAC-CGGGGCACAGGTCACAGGACTGGGGTGGAAGGCGGCACG-GAGTAC------GCGCGCGGG-AAAACCCAGGGATCACAGTGGCCCAA---AGCTGGGCACTTCCCAATTCCGGGGATTGGT--------GCTACAGGCACTCCAGGTTCCACCGCAGAACTGTGTCCAGCACGAAGGCAGTGCTGTCTC-------GCGGGAGGCAGGGCCGCACCACCACC-AGGGGCGGGAAGGGGTCA-GCAGGGAGGCGCCCCCGTGTTTCCAGCTGCACTGGGCGCCTGCGTCGGGGGTGGCGCTGATGCAGAGCGCGGGGGCGCAGGCTAAACCTAAAAGAGGGAAGCTTTTG-GGGGCGGAACAGGCAAC-------ACCGCACACTGCCCTTCCCACCCGAATGGTGttttaccttttttttttcttttttcttt---ttgagacggagtttctctcttgttgcccaggcttggagtgcaatagcccgatctcggctcactgcaacttcggcctcccgggttcaagcaattctcctgcctcagcctcccgcgcagctgggattacaggcgtgcgccaccacgcccggc---taattttgtat i chlSab2.chr4 C 0 C 0 s calJac3.chr2 177385 674 - 204313951 caacatctgggtgggcaactgggtgaaaattcagagaaaaccttaggaactctgaggatgaaaaaagttagCGTTCATGGAAGGAGGCACTGAAGAACATAAAAAACTGGAATAACGCTATGAAATAATGACAATAATTGTAGTATCCTG-------------AAC-AGGGACACAGGACACGGGACTGAGATGGAACGCGCGCCGAGAGCGCGCGCGGGCGCACGGGAAAGACCCGGGGATCGCAGTTGCCCGACCGAAGCCGGCACTTCCCAATTCCGGGGATTTGTAGGTTTCGGCTACAAGCACTCCGGGCTCCACTGTAGAACTGCGCCCAGCACCAAGGCAGTGCTCCTCCCTCTCAGGAGGGAGGCTGGGCTGCGCGACCACC---------AGAAgggcccggccggggggcg-ccgAGTGTTTCCAGCTGCA--------cgggggcgggggccgcgctgctgccccgcgc-ggggcACAGGTTAAACCCA---GAGGGAAGCTTTCG-AGGACGGAAGAGACGACGGAGAACGCCGCACACTGTGCTTCTCACCTGAATTGTGttttgctttttttttt--t------------ttgagatggagtttcgctgtcgttgcccagg-ctggagtacaatggcgcgatctcggctcactacaacctcc--------------------------gcctcagtctccagagtagctgggattacgggcttgctc----------------taattttgtat i calJac3.chr2 I 5724 C 0 a score=139518.000000 s hg38.chr3_KI270935v1_alt 4925 83 + 197351 ttttagtagatac-tgggtttctccatattggccaggttggtctcgaactcctgacttcaggtgatccaccggcctcggcctcc s panTro4.chr3 629088 83 - 202329955 ttttagtagatac-tgggtttctccatattggccaggttggtcttgaactcccgacttcaggtgatccaccggcctcggcctcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199658425 83 + 202140232 ttttagtagatat-agggtttctccatattggccaggttggtctcgaactcccgacttcaggtgatccaccggcctcggcctcc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 179962196 83 - 181584905 ttttagtagatac-gaggtttctcaatattggccaggctggtctcgaacccccgacttcaggtgatccaccggcctcggcctcc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 30262 83 + 174439528 atttagtagatac-ggggtttctccatattggtcaggctggtctcgaactcccgacttcaggtgatccaccggcctcgacctcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532045 83 - 91010382 ttttagtagatac-gaggtttctcaatattggccaggctggtctcgaacccccgacttcaggtgatccaccggcctcggcctcc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178059 84 - 204313951 ttttagcagagacaggggtgtctccatgttggtcaggctggtctcgaacatcccacctcaggtgatccgcccgcctcagcctcc i calJac3.chr2 C 0 C 0 e nomLeu3.chr11 120767953 8 + 123690457 I a score=32423.000000 s hg38.chr3_KI270935v1_alt 5008 48 + 197351 caaagtgctgggattacacgcgtcagccaccgcacccggccTGCTTGC s panTro4.chr3 629171 48 - 202329955 caaagtgctgggattacacgcgtcagccaccgcacccggccTGCtttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199658508 48 + 202140232 caaagtgctgggattacaggcgtgggccaccgcacctggccTGCtttt i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 30345 48 + 174439528 caaagtcctgggatttcaggcgtcAGACACTGCGCACGgcctgcttta i papAnu2.chr6 C 0 I 16 s calJac3.chr2 178143 46 - 204313951 caaagtgctgagattacaggcgtgagccaccgcgcccggccTGCAt-- i calJac3.chr2 C 0 C 0 e chlSab2.chr4 89532128 0 - 91010382 C e macFas5.chr6 179962279 0 - 181584905 C e nomLeu3.chr11 120767953 8 + 123690457 I a score=269418.000000 s hg38.chr3_KI270935v1_alt 5056 247 + 197351 ttttttttttttttttttt------------gcagagtctcgctgtccaccgggctggagctgcagtgatctcggctccctgcggcctcgacctcccgggctcaggcgatcctcccgcctcagcccacggagtacatgggaccacaggag---cccaccacgcccgactacttgctgtaatttttgtagggatggggtctagccccgctgcccaggctggtccgcactgctgggctcaagagctccgcccgcctccgcctca s panTro4.chr3 629219 257 - 202329955 ttttttttttttttttttt-tttttttttttgcagagtctcgctgtccaccgggctggag-tgcagtgatctcggctccctgcggcctcgacctcccgggctcaggcgatcctgccgcctcagcccacggagtacatgggaccacaggag---cccaccacgcccgactacttgctgtaatttttgtagggatggggtctagccacgctgcccaggctggtccgcactgctgggctcaagagctccgcccgcctccgcctcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199658556 245 + 202140232 tttttttttttttt-----------------gcagagtctggctgtccaccgggctggagttgcaatgatctgggctccctgcagcctcgagctcccaggctcaggcgatcctcccgcctcagcccacagagtagatgggaccacaggaggccgccaccacgcccgactactttttgtaatttttgtagggatggggtctagccaccctgcccaggctggtccgaactgctgggctcaagagctccgcctgcctccgcctcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120767961 250 + 123690457 ttttttttttttttttttt------------tcagagtctcgctgtccaccaggctggagttgccgtgatctcggctccctgcagcctccagctcccaggctcaggcgatcctgccgcctcagcccacggagtagatgggaccacaggagcccgccaccacgcccgactactttttgtaatttttgtagggatggggtctagccacgctgcccaggctggtcccaactgctgggctcaagagctccgcccgcctccaccttc i nomLeu3.chr11 I 8 C 0 s papAnu2.chr6 30409 261 + 174439528 tttatttatttatttatttatttatttttgggcaGAGTCTGGCTGTCcaccgggctagag-tgcagtgatctcggctccctgcggcctcgacttcccgggctcaggcgatcctcccgcctctgcccatggagtagatgggaccacaggggcccaccaccacgcccgactattttctgtaatttttgtagggatggggtctggccacgctgcccaggctggtccgaactgctgggctcaggagctccgcccgcctccgcctcc i papAnu2.chr6 I 16 C 0 s calJac3.chr2 178189 244 - 204313951 --tttttttttcttttctg------------gcagagtctggcggtcgaccgggctggag-tgcagtgatctcggctccctgaggccccgactg--agggctcaggcgatcctcccgcctcagcccccggggcagctaggcccacaggagcccgccaccgcgcccggcggctt-ctgtaatttttgtagggatgaagtttcgccaagctgcccaggccgggccgaagtgctggactcaacagctccgcccgcctccgcctcc i calJac3.chr2 C 0 C 0 e chlSab2.chr4 89532128 0 - 91010382 C e macFas5.chr6 179962279 0 - 181584905 C a score=369415.000000 s hg38.chr3_KI270935v1_alt 5303 177 + 197351 caaagcgcagggatcccaggtgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAACGAAATCCCTGCTCCATCACTGCCTGTCCCGGGTCGCGGCGCGGGACATTTCCTCCAAGCGCCT s panTro4.chr3 629476 177 - 202329955 caaagcgcagggatcacaggtgtgagctaccgcgccccgccCAGAGTTTCCCACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAACTAAGTCCCTGCTCCATCACTGCCTGTCCCGGGTCGCGGCGCGGGACGTTTTCTCCAAGCGCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199658801 177 + 202140232 caaagcgcagggatcacaggtgtgagctaccgcgccccgccCGGAGTTTCCGACTGTTAGCGTGAATCATATTCACGTCAAAACTTCTTTTTATACAAGAACTAAAAGGCAAACTAAATCCCTGCTCCATCACTGCCTGCCCCGGGTGGCGGCGCAGGACATTTTCTCCAAGCGCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768211 177 + 123690457 caaagcgcagggatcacaggtgtgagctaccgcgtcccgccCAGAGTTTCCGACTGTTAGCGGGAATCATATTCACGTCAAAACTTCTCTTTATACACGAACTAAAAGGCAAACTAAATCCCTGCTCCATCATTGCCTGTCCCGGGTCGCTGCGCAGGACATTTTCTCCAAGCGCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962279 173 - 181584905 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTTTCCGACTGTTAGCCTGAATCACATTCACGTCAAAACTTCTTTCTATAAGAGAACTAAAAGG----CTAAGTCCTTGCTCCATCACTTCCCGTCCCGGATCGCGGCGCGGGGCATTTTCCCCAAGCGCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 30670 177 + 174439528 caaagcgcagggatcacaggcgtgagctaccgcgccccgCCCAGAGTTTCCGACTGTTAGCCTGAATCACGTTCACGTCAAAACTTCTTTTTATACAAGAACTGAAAGGCTAACTAACTCCCTACTCCATCACTTCCCGTCCCGGGTCGCGGAGCCGGACATTTTCTCCAAGCGCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532128 177 - 91010382 cacagcgcagggatcacaggcgtgagctaccgcgccccgccCAGAGTCTCGGACTGTTAGCCTGAATCCCATTCACGTCAAAACTTCTTTCTATAAAAGAACTAAAAGGCAAACTAAGTCCTTGCTCCATCACTTCCCGTCCTGGGTCGCGGCGCGGGGCATTTTCCCCAAGCGCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 178433 159 - 204313951 caaagcgccggga-----------------CGC-CCCCGCCCAGAGTTTTCGACTGTTAGTGTGAATCACGCTCGCGTCAAAACTTCTTTTTATACAAGAACTGAAAGGCAAACTCGGACTCTGCTCCATCACTTCCAGTCCCGGGACTCGTCGCTGGACACTTCCTCCACGCGCCT i calJac3.chr2 C 0 I 97 a score=20272.000000 s hg38.chr3_KI270935v1_alt 5480 45 + 197351 TC------------------------------------------------CCGGCCCCG---CGCGCAGGT-----------------------------------------------GGCCTGCGCCG--------GAGGATCCCGGACA s panTro4.chr3 629653 44 - 202329955 TC------------------------------------------------CCG-CCCCG---CGCGCAGGT-----------------------------------------------GGCCCGCGCCG--------GAGGATCCCGGACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199658978 43 + 202140232 TC------------------------------------------------CCG--CCCG---CACGCAGGT-----------------------------------------------GGCCTGCGCTG--------GAGGATCCGGGGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768388 45 + 123690457 TC------------------------------------------------CCGGCCCCG---CCCGCAGCT-----------------------------------------------GGTCTGCGCGG--------GACGATCCCGGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962452 43 - 181584905 TC------------------------------------------------ACG-CACCG---CGCCCAGGC-----------------------------------------------GGCC-GCGCCG--------GAGCATCCCGCGCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 30847 149 + 174439528 TCCCAGCACCGGTAGACGGCTGCCTGCTCCAGAGCTCTGGCTTTCTCCAGACG-CCCCGGACCGCACAGGCCCCGCAGGCGCCAGGGCGTTGCTTGGCAACTGAGCTGCGAGGGGATTGGCC-GCGCGGGACCCCGTGACCATCCCGGAGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532305 43 - 91010382 TC------------------------------------------------ACG-CACCG---CGCCCAGGT-----------------------------------------------GGCC-GCCCCG--------GAGCATCCCGCGCA i chlSab2.chr4 C 0 C 0 e calJac3.chr2 178592 97 - 204313951 I a score=444844.000000 s hg38.chr3_KI270935v1_alt 5525 273 + 197351 ACGCGCATTTCCTGCGCCCCCGGAAGCGGCGGTAACGCCTGGCCCTGCCCCC-GGCAGAGGCGGAAGCACAGTCGCTCT--GAGGTCGCCCGTGGCCGCAGGTGCCTCAGCCCAGCCGCGCG-------CCTTGGCCCTTGGCCGCCTACTCCTACCGCCCCGG--CCTTGGG--CGGCCCTGGGCCTGCTG-------------CGGGCGCG----------GCGCTGCCCGACCAGAGCTTCCTGTGGAACGTCTTCCAGAGCTGCCAC---------------CTGGCACCGCCCCGGCACC----TCCCGCCTCCCCCGCAGCTG s panTro4.chr3 629697 273 - 202329955 ACGCGCATTTCCTGCGCCCCCGGAAGCGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGTGGTGTCGCTCT--GAGGTCGCCAGTCGCCGCACGCGCCTCAGCCCAGCGGCGGG-------CCTTGGCCCTTGGCCGCCTACTCCTACCGCCCCAG--CCCCGGG--CGGCCCTGGGCCTGCTG-------------CGGGCGCG----------GCGCTGCCCGACCAGAGCTTCCTGTGGAACGTCTTCCAGAGCTGCCAC---------------CTGGCAccgccccggcacc----tcccgcctcccccgcagctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199659021 275 + 202140232 ACGCGCATTTCCTGCGCCCCCGGAAGTGGCGGCGACGCCAGGCCCTGCCCCC-CGCAGAGGAGGAAGCGCAGTCGCCCTGAGAGATCTCCAGTCGCCGCAGGCGCCTCGGGCCAGCCGCGCG-------CCTTGGCCTTTGGCCGCCCATTGCTAccgccccgg--ccctggg--cggcccggggcctgctg-------------cgggcggg----------gcgcTGCCCGACCAGAGCTTCCTGTGGAACGTCTTCCAGAGGGGCGGG---------------CTGGCAccgcccaggcacc----tcccgcctccgccgcagccg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768433 251 + 123690457 ACGCACATTTCCTGCGCCC---GAAACGGCGGTAACGCCAGGCCCCGCCCCC-GACAGAGGCGGAAGCGGAGCCGCCCTGAGAGGTCTCCCGTTGCCGCAGGCGCCTCAGCCCAGCCGCGCG-------CCTCAGCCCTTGGCCGCATACTCCTACCGCCCTGG--CCCCGGG--CAG----------------------------------G----------GCGCTGCCAGAACAGAGCTTCCTGTGGAACGTCTTCCAGAGGTGCCGG---------------CTGGCACTGCCCCCGCACC----CCCCGCCTCCGCCGCAGCCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962495 266 - 181584905 C-ACGCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCC-GGCAGAGGCGGAAGCGGAATCGCCTTGAGAGATCTCCCGTCGCCGCAGGCGCCTCAGCCCGGCCGCGCGCCTTCGCCCTTGGCCCTTGGCCGCCTGCCCCTACCGCTCCGG------------------GGGCTTGCTG-------------CGGGCGCG----------GCGCTGCCGGGCCAGTGC-TTCTGTGGAATGTCTTCCAGAGGTGCGGC---------------CTGGCCCCGCCCGGGCACC----TCCCGCCTCCGCGGCGACCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 30996 277 + 174439528 CTACGCATTTCCTGCGCCCCCGGAAGTGGAGGTAACGCCAGGCCCTGCCCCC-GGCAGAGCCGGAAGCGGAGTCGCCCTGAGAGGTCTCACGTCTCCGTAGGCGCCTCAGCCCAGCCGCGCG-------CCTTGGCCCATGGCCGCCTACTCCTACCGCCCCGGCCCCGGGGC--CGGCCCAGGGCCTGCTG-------------CGGGCGCG----------GCGCTGCCGGACCAGAGCTTTCTGTGGAACGTCTTCCAGAGGTGCGGC---------------CTGGTACCGCCCCAGCACC----TCCCGCCTCCGCTGCGGCCG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532348 262 - 91010382 C-ACGCATTTCCTGCGCCCCCGGAAGTGGCGGTAACGCCAGGCCCTGCCCCCTGGCAGAGGCGGAAGCGGAATCGCCTTGAGAGATCTCCGGTCGCCGGAGGCGCCTCAGCCCGGCCGCGCGCCTTGGCCCTTGGCCCTTGGCCGCCTGCTCCTACCACTCCGG------------------GGGCTTGCTT-------------TGGGCGCG----------GCGCTGCCGGGCCAGTGC-TTCTGTGGAATGTCTTCCAGAGGTGCGGC---------------CTGGCACCGCCCGGGCACC----TCCCGCCTCCGCGGC----- i chlSab2.chr4 C 0 I 4 s calJac3.chr2 178689 314 - 204313951 TCACGCGTTTCCTGCGTCCCCGGAAGTGACGGT-ACGCCAAGTCCTGCCCCC-GGCAGACCCGGAAGCGGAGTCGCCCTGAGCCTTCTCCCTTAGCCGCCCGCGCCTCAGCCCAGACGCGCG-------CATCGGCTCATGGCCGCCTACTCCTAccgccccgg--ccccggggccggccccggcccAGTGGGATCCCCGGGTACCGAGCTCGNNNNNNNNNNGCGCTGCCGGACCAGAGC-TCCTGT-GAACGTCTTCCAGAG-TGCGGCTGCACGCCTCACTCGCTCGCTCTGCGC-GGCGCCCGGATCCTGCCCGACCCGCGGCAG i calJac3.chr2 I 97 C 0 a score=24238.000000 s hg38.chr3_KI270935v1_alt 5798 46 + 197351 C------------------------------CCCGGACCCGTGTCCCGACCCCCGCGGCCAACCCCGTTCCCTGCC s panTro4.chr3 629970 46 - 202329955 c------------------------------cccggacccgtgtcccgacccccgcggccaaccccgttccctgcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199659296 46 + 202140232 c------------------------------ccccgacccctgccccgacccacgcggccgcccccgttcgctgcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768684 76 + 123690457 CCCCCTGCCCCGAACCCGCGGCCGACCCCAACCCCGACCCCTGCCCCAACCGCCGCGGCCGCCCCCGTTCCCTGAC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 31273 43 + 174439528 C------------------------------CCCCGACTCCTGCCCC---CAACGCCGCGGACCCGGTTCACTGCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532614 34 - 91010382 G------------------------------CCCCGACCCCCGCGGC------CGCCCCCGACCC------CTGCC i chlSab2.chr4 I 4 I 9 s calJac3.chr2 179003 44 - 204313951 --------------------------------CCGCAGTCCCGTGCCGGGCCCTGCGTCATCATCCGTCCCTTGCC i calJac3.chr2 C 0 I 2 e macFas5.chr6 179962761 0 - 181584905 C a score=6366.000000 s hg38.chr3_KI270935v1_alt 5844 9 + 197351 GGTTGCCCC s panTro4.chr3 630016 9 - 202329955 ggttgcccc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199659342 9 + 202140232 ggttgcccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768760 9 + 123690457 GGTTTCCCC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 31316 9 + 174439528 GGTtccccc i papAnu2.chr6 C 0 C 0 s calJac3.chr2 179049 7 - 204313951 GATTCTC-- i calJac3.chr2 I 2 C 0 e chlSab2.chr4 89532648 9 - 91010382 I e macFas5.chr6 179962761 0 - 181584905 C a score=105444.000000 s hg38.chr3_KI270935v1_alt 5853 112 + 197351 GCGGCCTCC--------------------------------------------------------------------------------------------CCCGTCACCTGCCGGGTCCCCA-------------------------------------GCGGCC-------TCCCCCGTCCCCTGCCCCGACCTCCGCCGTC---------------------TCCCCCG-CCCCTGCCCGGACCCCCGCGGGCGCCCCCGAACCCTA s panTro4.chr3 630025 107 - 202329955 gcggcctcc--------------------------------------------------------------------------------------------cccgtcacctgccatgtcccca-------------------------------------gcggcc-------tcccccgtcccctgccccgaccgccgccgcc---------------------tcccccgacccctgccccgacccccgcggccgcccccga------ i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199659351 181 + 202140232 gcggcctcccccatc-------------------------------------------------------------ctcTGCTGGTTGCCCCGCGGCCTCTCCCATCACCTGCCGGGTCCCCAGAGGGCCCCCCCCACCCCGTTCACTgccccgacccccgcggcc-------gcccccatcccctgccccgatccccgcggcc---------------------gcccccgacccctgccccgacccccacggcctcccccgacccctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768769 199 + 123690457 GCGGCCTCACCCATCACCTGCCGGGTCCCCAGCGGCCGCCCCCGACCCCTGCCCCGACTGACGCGGCTGCCGCGTTCCCAGCCGGTTGCCCCGTGGCCTCCCCCGTCACCTGCCGGGTCCCCA-------------------------------------GCGGCC-------TCCCCCGTTCCCTGCCCCGACCGCCACCGCC---------------------TCCCCCGTACCGTGCCCGGACTTCCGCGGCCGCCCCCGA------ i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 31325 141 + 174439528 gcggcctcc--------------------------------------------------------------------------------------------tctgtcccctgtcgggtccccc-------------------------------------gcggcctcccccttcccccttcccctgccccgtcccccgcggcctcccccttcccccttcccccgtcccccgtcccctgccccgcccgccgcggcctcccccgtcccctg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89532657 113 - 91010382 GCGGCCTCC--------------------------------------------------------------------------------------------CCCGTCCCCTGCCCCGACCCCC-------------------------------------GCGGCC-------GCCCCCGACCCCTGCCCCGACTGTCGCGGCC---------------------TCCCCCGTCCCCTGCCCCGACCCCCGCGGCCGCCCCCGACCCCTG i chlSab2.chr4 I 9 C 0 s calJac3.chr2 179056 113 - 204313951 GCGGCAGTC--------------------------------------------------------------------------------------------CCCGTTCGCTGCCGGGTcccct-------------------------------------gcgtcc-------tcccccgtcccttgccccgactcccgcggcc---------------------gcccccgttcgctgccgggttccctgcgtcctcctccgtcccttg i calJac3.chr2 C 0 C 0 e macFas5.chr6 179962761 0 - 181584905 C a score=1637434.000000 s hg38.chr3_KI270935v1_alt 5965 861 + 197351 CCCCGACCGACGCGGCCGCCCCCATCCCCTGCCCCGACCCCCGCGGCCGCCCCCATCCCCTTC-----------------------------------------------------------CGGGTCCCCCGCGGTCTCCCCCGTCCGCTGCCCGGTCTCCTGGGGCCGCCCCTGCCTCCTGCCCGGTCCCTGTCCTGTGCGTCGGGCGCTTCCCAAGGTGCAGAGGGC-GCCACTGCAGACCCGAGGTCGCGGCCACCGGCTCCTGGGCCAGGCCCCGTTTCTCGCCTC--GAGCCGTCG-GGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACTGTCTGGGCCGCTGTTAAAATGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGCTCGGGCCAGGTGACCTTTATGGCGGCGCCTTCTGTCCCTGGTCGCTTTTCCACTGAATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGAGGGAATCTTGTCTTGTCTGTGAAAAAGGGAAACTGGTGCAAATGGGAATTCAGACAGGTCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGAGAGAAAGATGATTGTCCTCTTAGGGGAAGAACACACTTGGACGT-GGCTCCTGGGGCACTTCCTTGATTCCGCTGTACTCCTCAGCGGGACCGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTGTTTGGTCTTCTTGATGTTATAGGGTTGATAGAG--AGGAGTGGAGTGATATCGGACACCCAGCTTCAGCAAGCTCTCTCCAAGGGTGAGTGGGCCAGTGGGACCTGGGTCTCCGGACCAA s panTro4.chr3 630132 836 - 202329955 -------------------------ccccttccccgaccgccgcggccgcccccatccccTTC-----------------------------------------------------------CGGGTCCCCCGCGGTCTCCCCCGTCCCCTGCCCGGTCTCCTGTGGCCGCCCCTGCCTCCTGCCCGGTCCCTGTCCTGTGCGTCGGGCCCTTCCCAAGGTGCAGAGGGC-GCCACTGCAGACCCGAGGTCGCGGCCACCGGCTCCTGGGCCAGGCCCTTTTTCTCGCCTCAAGAGCCGTCAAGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACTGTCTGGGCCGCTGTTAAAATGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGCTCGGGCCAGGTGACCTTTATGGCGGCGCCTTTTGTCCCTGGTCGCTTTTCCACTGAATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGAGGGAATCTTGTCTTGTCTGTGAAAAAGGGAAACTGGTGCAAATGAGAATTCAGACAGGCCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAAAGAGAGAGAAAGATGATTGTCCTCTTAGGGGAAGACCACACT-GGACGTCGGCTCCTGGGGCACTTCCTTGATTCCCCTGTACTC---AGCGGGACGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTATTTGGTCTTCTTGATGTTATAGGGTTGATAGAG--AGGAGTGGAGTGATATCGGACACCCAGCTTCAGCAAGCTCTCTCCAAGGGTGAGTGGGCCAGTGGGACCTGGGTCTCCGGACCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199659532 841 + 202140232 ccccgacccccgcggcggcccctgacccctgccccGACGGACGCGGCCGCCCCCATCCCCTGC-----------------------------------------------------------CGGGCCCCTCGCGGTCTCCCCCGTCCCCTGCCCGGTCTCCTGTGGCCGCCTCTGCCTCCTGCCGGGTCCCTGTCCTGT--GTCGGGCCCTTCCCAAGGTGCAGAGTGC-GCCACTGCAGACCCGAGGTCGC-GCCACCGGCTTCTGGGCTAGGCT-------------------CCGTCAGGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGAATGCCCGGACGGCTGTTAAAATGTCAGCAGCCAAGGAACAAGCAGCGACCTGGCGTCTGGTCGGGCCAGGTGACCTTTATGGCGGCGCCTTCTGTCCCTGATCGCTTTTCCACTGAATGAATGACCAAAACTGTAGTAACTCATGGCCAGGGAATGGCTTAGTTATCTGAGGGAATATTTTCTTGTTTGTGAGAAAGGGAAACTGGTGCAAATGCGAATTCAGACAGTCCAGGA-GGGAAGGAAGGGAAGGATTGAGGTGTGAGA--AGAGAGAAAGATGATTGTCCTCTTAGGGGAAGACCACACTTGGACGTCGGCTCCTGGGGCACTTCCTTGATTCCCCTGTACTCCTCAGCGGGATGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAAGTTTCGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCAGACACCGAGCTTCAGCAAGCTGTCTCCAC-GGTGAGTGGGCCAGTGGGACCTGGGCCTCGGGACCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120768968 835 + 123690457 -------------------------CCCCTGCCCCGACCCCCGCGGCCGCCCCCATCCCCTGC-----------------------------------------------------------CAGGTCCCTCGCAGTCTCCCCCGTCCCCTGCCCGGTCTCCTGTGGCTGCCCCTGCCTCCTGCCCGGTCCCTGTCCTGTGCGTCAGGCCCTTCCTAAGGTGCAGAGTGCAGCCACTGCAGACCCGATGTCGTGGCCACCGGCTCCTGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCAGGGGGAGGGTCTCCA-GGGTGCTTGTTTGGGGAAAGCGGAAACAGACCGCCTGGGCCGCTGTTAAAATGTCAGCAGCCAAGGAAGAAGCAGCGACCTGGCGTCTGGTTGGGCCAAGTGACCTTTATGGGGGTGCCTTCTGTCCCTGGTCGCTTTTCCACTGAATGAATGACCGAAACTGTAGTAACTCATGGCCAGGGAATGGCTTA-TTATCTGAGGGAATCTTTTCTTGTTTGTGAAAAAGGGAAACTGGTACAAATGCGAATTCAGACAGGCCAGGAGGGGAAGGAAGGGAAGGATTGAGGTGGGAAA--AGAGAGAAAGATGATTGACCTCTTAGGGGAAGACCACACTTGGACGTCGGCTCCTGGGGCACTTCCTTGATTCCCCTGCACTCCTCAGCGGGATGGGAGAGGCGGAGGTTCCAGGAGG----GAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTCGATCGCCAGCTTATTTGG---TCTTGATGTTGTAGGGTTGATAAAGACAGCAGTGGAGTGATAT-GGACACCGAGCTT-AGCAAGCTGTCTCCAACCGTGAGTGGGCCAATGGGACCTGGGCCTCCAGACCGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179962761 836 - 181584905 CCCCGACCCCCGCGGCCGCCCCCGT-CCCTGCCCCGACCGACGCGGCCGCTCCCGTCCCCTGC-----------------------------------------------------------CCGGTCCCCTGCGGTCTCCCCCGTCCCCTGT------------GGCCGCCCCCGCCTCCTGCCCGGTCCCTGCCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGACCCGAGGTCGCGGCCACCGGCTCCCGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCAGAGACAGAATGTCTGGGC-GCTGTT-AAGTGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCGCCTTCTGTCCC-GGTCGCTTTTCCACGGAATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTACCTGAGGGAA-----TCTTGTTTGTGAAAAAGGGAAACTGGTGCAAATGTGAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATTG------------AGAGAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACGTGGGCTCCTGCGGCACTTCCTTGATTCCCGTGTCCTCCTCAGCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCAGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTACTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAACGGTGAGTGGGCCCGTGGGACCTGGG--TCCGGACCCA i macFas5.chr6 C 0 I 41 s papAnu2.chr6 31466 899 + 174439528 ccccgacccctgcggccgcgcccgtcccctgccgggtcccctgtggccgcccccgtcccctgcgggtcccctgtggccgcccccgtcccctgtgggtctcctgtggccgcccccgtcccctgcgggtcccctgcggccgcccccgtcccctgt-gggtctcccgcggccgcccccgcctcctgccccgtccctgtcctgTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGACCCGAGGTCGCGGCCACCGGCTCCCGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGCGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCAGAGACA----GCCTGGGC-GCTGTT-AAGTGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTCCGGCGGCGCCTTCTGTCCCGGGTCGCTTTTCCACGGAACGAATGACCGAAACTGGAGTGACTCATGGCCAGGGAATGCCGTAGTTATCTGAGGGAA-----TCTTGTTTGTGAAAAAGGGAAACTGGTGCAAATGGGAATTCAGACAGgccaggagaggaaggaagggaaggattG------------AGAAAGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACGTGGGCTCCTGGGGCACTTCCTTGATTCCCGTG---TCCTCAGCGGGATGGGAGAGGCGGAGGTTCCAGGAGGCTCCGAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGacgtttgttttgcttttcctgaACTTTGGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGC-TCAGCAAGCTCTCT-CAACGGTGAGTGGGCCAGTGGGACCTGGG--TCCGGACCGa i papAnu2.chr6 C 0 M 570 s chlSab2.chr4 89532770 824 - 91010382 CCCCGACC---------------------------GACGGACGCGGCCGCGCCCGTCCCCTGC-----------------------------------------------------------CGGGTCCCCTGCGGTCTCCCCCGCCCCCTGT-GGGCCCCCTGTGGCCGCCCCCGCCTCCTGCCCGGTCCCTGTCCTGTGCGTTGGGCCCTTCCAGAGGTGCAGAGTA--GCCGCTGCAGACCCGAGGTCGCGGCCACCGGCTCCTGGGCTAGGCCCTTTTTCTCGCCTCAGGAGCCGCCGGGTGGAGGGTCTCCAGGGGTGCTTGTTCGGGGAAAGCGGAAACGGACTGCCTGGGC-GCTGTT-AAGTGTCAGCAGCCGAGGAAGCAGCAGCGACCTGGCGTCTGCTCGGGGCAGGTGACCTTTAC-GCGGCGCCTTCTGTCCCGGGTCGCTTTTCCACGGAATGAATGACCGAAACTGTAGTGACTCATGGCCAGGGAATGCCTTAGTTATCTGAAGGAATCTTTTCTTGTTTGTGAAAAAGGGAAACTGGTGCAAATGTGAATTCAGACAGGCCAGGAGAGGAAGGAAGGGAAGGATTG------------AG--AGAAAGATGATTGGCCTCTTAGGGGAAGACCCCGCTTGGACGTGGGCTCCGGGGGCACTTCCTTGATTCCCGTGTCCTCCTCAGCGGGATGGGAGAGGCGGGGGTTCCCGGAGGCTCCGAGCCTTCCAGAGTCGGTGCAGGGTTGACAGGAGACGTTTGTTTTGCTTTTCCTGAACTTTGGATCGCCAGCTTATTTGGTCTTCTTGATGTTGTAGGGTTGATAAAGACAGGAGTGGAGTGATATCGGACACCGAGCTTCAGCAAGCTCTCTCCAACGGTGAGTGGGCCAGTGGGACCTGGG--TCCGGATCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 179169 799 - 204313951 ccccgaccctcgcgtccgcccccgtcccctgccctgacttccgtggccaaccccgtctcctgc-----------------------------------------------------------ggcgaccctcgt-------------------------------ggccgcccccgcctcctgcccGGTCCCTGGCCCGTGCCTCGGGCCCTTATCGAGGTGCAGAGTCT-GCCACTGCAGCCCCGAGGTCGCGGCCCCAGGCTTCTGGGCTAGGCCCGTTTTCTCGCCCCGAGAGCAGCCAGGTCGAGGGTCTCCGGGGGTGCCTGTTTGGGGAAAGCAGAAGCAGACTGCCTGGGC-GCTGTTAAAATGCCGGCAGCCGAGGAAGAAGCTGAGATCTGGCGTCTGCTTGGGGCAGGTGACCTTTACGACGGCGAC-TCTGTCCCTGGTCTCTTTTCCAC----TGATTGACCGAAACT--AGTGACTCATGGCCAGGGAATGGCTCAGTTGTCTGAGAA----TTTTTTTGTCTATGAAATAGGGAAAGTGGTGGAGGTGTGAATTCAGATATGCCAGGAGAGGAAGGAAGCGAAGGACCG------------AG--------------GATCTCTTAGGGGAAGACCACGCTTGCGCTTCGGCCCCTGGGGCACTTCCTTTATCCCCGGTTCTCCTCCCGCAGGATGGAAGAGGCGGAGGTTCCAGGACG----GAGCCTTCCAGACTCAGTGCAGGGCTGACAGGAGACGTTCGTTTTGCTTTTTCTGCGCTTTGGATCGTCAGCTCATTTGGTCTTTTTGATGTCATAGGGTTGATAAAGACAGAAGTGGAGTGATATCGGACAGCGAGCTTCAGCAAGCACTCTCCAACGGTGAGTGGGCCAGTGGGGCCTGGGCCTGCGAACCTA i calJac3.chr2 C 0 C 0 a score=84085.000000 s hg38.chr3_KI270935v1_alt 6826 64 + 197351 GAAGCCG----------------------------------CGAGCCTGCCCTGCTCACAGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC s panTro4.chr3 630968 64 - 202329955 GAAGCCG----------------------------------CGAGCCTGCCCTGCTCACAGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199660373 64 + 202140232 GAAGCCG----------------------------------CTAGTCTGCCCTGCTCACAGTGGATAACTTTCTTTCTGAAGTTGATTTTCCAAAGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120769803 64 + 123690457 GAAGCCG----------------------------------CGAGCCTGCCCTGCTCACAGTGGGTAACTTTCTTTCTGAAGTTGATTTTCCAAGGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179963638 98 - 181584905 GAAGCCGCTGAGTGGGCCCGTGGGACCTGGGTCCGGACCCAGAAGCCTGCTCTGCTCGCAGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i macFas5.chr6 I 41 C 0 s chlSab2.chr4 89533594 57 - 91010382 -----------------------------------------GAAGCCTGCTCTGCTCACAGTGGATAACTTTCTTTCTGAAGTTCATTTTCCAAGGAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 179968 46 - 204313951 GAAGCCT----------------------------------CGAGCCTGCTGTGCTCG------------------CTGGAGTTGATTTTCCAAGGAC i calJac3.chr2 C 0 I 309 e papAnu2.chr6 32365 570 + 174439528 M a score=730093.000000 s hg38.chr3_KI270935v1_alt 6890 434 + 197351 AAAGGAATCATTAGGACAAATTATTA---CTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACGGCGTGCGTGAGCGCAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGCTCTGTCCAGCCGAAAGCCTTTTGGTAAGTTGGGGGTCCTTGAATTTCCTGGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGCTTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAACTGCAGAAACTGGGACTGGGTTCCTGGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGCG s panTro4.chr3 631032 437 - 202329955 AAAGGAATCGTTAGGACAAATTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTGCGTGAGCACAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGCTCTGTCCAGCCGAAAGCCTTTTGGTCAGTTGGAGGTCCTTGAATTTCCTGGGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCAAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGCTTGGGGAGCTCAGGCAGCACTTGTGTGGGAACTTGGCTGTTACAGGAACTGCAGAAACTGGGACTGGGTTCCTGGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199660437 437 + 202140232 AAAGGAATCATTAGGACAAATTATTATTACTGGTTCATGGAGGAGATGCTTCTGGTTTATTTTGTGGCTACCGCTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTGCGTGAGCACAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGGTTAGCTCTGTACAGCCGAAAGCCTTTTGGTAAGTTGGACGTCCTTGAATTTCCTCGGTGACTGCATCTTGGTGACTTCTCTGAATGGACCTTCGAGGGCA--------------------CTGAGGGGTGATTGTTGGAGGGGTTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAACTGCAGAAACTGGGACTGGGTTCCTGGGGAAAGGACTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120769867 437 + 123690457 AAAGGAATCATTAAGACAAATTATCATTACTGCTTCATGGTGGAGATGCTTCTGGTTTATTTTGTGGCCACCACTGTTACTGCTTGGAGTGCCTCACCGAGCCAGCTAACAACTGCGTGCGTGAGCACAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGCTGTAGG-CTTGGGAGGGGAATAGGAAGGTTAGCTCTGTACAGCCGAAAGCCTTTTGGTAGGTTGGAGGTCCTTGAATTTCCTCAGTGACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------CTGGGGGGTGATTGTTGGAGGGCTTGGGGAGCTCAGGCAGCATTTGTGTGGGAACGTGGCTGTTACAGGAACTGCAGAAACTGGGACTGGATTCCTGGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAGTTAT-GGGGAGGTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179963736 434 - 181584905 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTCTGTTGTGGCTGCCGCTGTTA---TTTGGAGTGCCTCACCAAGCCGGCTGACAACTGCGTGCATGAGCACAAGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGAAATAGGAAGCTTAGCTCTGTACAGCCGGAAGCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTAACTGCATCTTGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGGGGGGTGGTGGTTGGAGGGCTTGGGGAGCTCAGGCAGCACTTGTGTGGGGACGTGGCTGTTACAGGAGCCGCAAACACGGGGACTGCATTCCTGGGGAAAGGATTGGGGGTGTTGGAGGCGCTGGCAGGGGAATTAT-GGGGAGGTG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89533651 433 - 91010382 AAAGGGATCATTAGGACAAAGTATTATTACTGCTTCATGGTGGAGATGCTTCTGGTTTGTGTTGTGGCTGCCGCTGTTA----TTGGAGTGTCTCACCAGGCCGGCTAACAACTGCGTGCATGAGCACAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGTTGTAGG-TTTAGGAGGGGAATAGGAAGCTTAGCTCTGTACAGCCGGAAGCCTTTTGGTAAGCTGGGGGTCCTTGAATTTCCTCGGTAACTGCATCTCGGTGACTTCTCTGAATAGACCTTCGAGGGCA--------------------TTGCGGGGTGATTGTTGGAGGGCTTGGGGAGCTCAGGCAGCACTTGTGTGGGAACGTGGCTGTTACAGGAGCCGCAGAAACGGGGACTGCATTCCTGGGGAAAGGATTGGGGGTGCTAGAGGCGCTGGCAGGGGAATTAT-GAGGAGGTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 180323 434 - 204313951 aaaagaGCCATCAAGACACGTTATTATTACCGCTTCATGGTGGAGATGCTTCTGGTTTATTTT-----------------------GAGTGCCTCACCGAGCCAGCTAACAGCTGCGTGCGTGAGCACAGGGAAAGGCTTCTTGAGAAATGAAAACTAGGGTGTGGGTTTTAGGAGGGGGGTAGGAAGATTAGCTCTG--CAGCAGAAACCCTTTTGGTAAGTTGGAGGTCCTTGAATTTCCTCGGTGACTGCACCTTGGTGACTTCTCTGCATAGACCATCGAGGGCACTAAAGGGTTACCAGGCGGCCTGGGAGGTGATTGTTGGAGGGCTTGAGGAACTCAAGCAGCACTTGTGTGGGAATGTGACTGCTGCAGGAACTGCAGATACCGGGACTGGGTTCTGGGGGAAAGGACTGGGGGTGTTGGAGGTGCAGGCAAGGGATTTATGGGGGAGGTG i calJac3.chr2 I 309 C 0 e papAnu2.chr6 32365 570 + 174439528 M a score=2130378.000000 s hg38.chr3_KI270935v1_alt 7324 968 + 197351 TTCTTATCAGTGTGCGAATATTGGGCGTTCAGGCAGCGGGAAATCTGGGTCCTTGGCGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGATCCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCTGATTCTGTGTATAGTTTG-CCTTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGGCTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCG-CTGTGGGTGGTG----GGGGGGGAGG-TGCTGGATTCAGTCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATGTT-----ATCAGTTCCTAATATGTGACGTATGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTACACTAGTGATTGTGCTTTCTTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTT-TATTTGCATCT----CAGTTTATTTATACTCGGG--AAGTGCAAGACATGGCGACTAGAAAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACTTCCTAAATGTTGACCACAGTGGATGCAAATGGCTCTGT-----GCATCGTCTGTTCAATATGGTCAGGTGACCACCCAGGTTCACGTGGTTTGTCACCAGGGTGATACGAGCCACACGGAGTGCCCTCCTCAGAGGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCAGCGAGTGATGCAAGATTTATGATCCATTTTAACAG-CTGCTTTTT s panTro4.chr3 631469 971 - 202329955 TTCTTATCAGTGTGCGAATATTGGGCGTTCAGGCAGCGGGAAATCCGGGTCCTTG-CGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAATTGATCCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCTGATTCTGTGTATAGTTTG-CCTTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATGTTGAAAGGCTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGGGGCGCGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCG-CTGTGGGTTGGGCGGCGGGGGGGGGG-TGCTGGATTCAGTCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATGTT-----ATCAGTTCCTAATATGTGACGTATGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTACACTAGTGATTGTGCTTTCTTGGTTTTTGTCTTTTCATTATTCTTAAATCCTCCTTTTTT-TATTTGCATCT----CAGTTTATTTATACTCGGG--AAGTGCAAGACATGGCGACTAGAAAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTCAGCTTAAAACTTCCTAAATGTTGACCACAGTGGATGCAAATGGCTCTGT-----GCATCGTCTGTTCAATATGGTCAGGTGACCACCCAGGTTCACGTGGTTTGTCACCAGGGTGATACGAGCCACACGGAGTGCCCTCCTCAGAGGCCATGTCTCAGAGACGTTTATTTTGAGTGGTTTTCCAGCGAGTGATGCAAGATTTATGATCCATTTTAACAG-CTGCTTTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199660874 965 + 202140232 TTCTTACCAGTGTGCGAATACTTGGCGTTCAGGCAGCGGGAAATCCGGGTCCTGG-CGTGTTGTGAGCTCCCTGGAGTTACGTTCTTGCCAGTTTCAGCTCAACTGATCCCCCTCCCCTGAGCTGTCATTGGATACATTTTACTTCATTGAACACCTGACTGCTGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCTGATGCTGTGTATAGTTTG-CCTTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCAGTTTTGAGATGTTGTGAAAATATTGAAAGGCTCCTCATTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGAA-CTGTGGTGCGGGGAGCACTATGGCTGCTAGACACTATCTCACTGCA-CTGTGGGTGGGG------------GG-TGCTGGATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCTTATATTATGACATCAGTTCCTAATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTACCTCTACACTAGTGATTGTGCTTTCTTGATTTTTCTCTCTTCATTATTCTTAAATCCTCCTTTTTT-TATTTGAATCT----CAGTTCATTTATGATCGGG--AAGTGCAAGACACGGCTACTAGAGAGAGATGTCAAGAGAACCCGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACTTCCTAAATGTTGACCACAGTGGATGCAAATGGCTCCGT-----GCATCATCTGTTAAATATGGTCAGATGACCACCCAGGTGCAAGTGGTTTGTCACCAGGGTGATACGAGCCACACGGAGTGCCCTCCTCAGAGGCCATGTCTCAGAGATGTTTATTTTGAGTGGGTTTCCAGTGAGCGATGCAAGGTTTATGATTGATTTTAACAGCCTGCTTTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120770304 961 + 123690457 TTCTTATCAGTGTGCGAATACCTGGCGTTCAGGCAGCGGAAAATCCGGGTCCTTG-CGTGTTGTGAGCTCTCTGGAGTTACGTTCTTGCCAATTTCAGCTCAATTGATCCCCCTCCCCTGAGCTATCATTGGATACATTTTACTTCGTTGAACATCTGACTGCTGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCTGATTCTGTGTATAGTTTG-CCTTTCCAGAT-CCGTGCCATTTAAGCTAGAAATGGGGTCAGTTTTGAGATGATGTGAAAATGTTGAAAGGATCCTTGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGGACCTGGGGCACGGGGAGCACTACGGCTGCTAGACACTGCCTCACTGCG-CTGTGGGTGGGG------------GG-TGCTGGATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCAGAGTAACATGTTTACCATATGAC-----ATCAGTTCCTAATATGTGACGTGTGGGTCACAGATGCTGGTGTATTATTTCACATGCATTTGTGTAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTACGCTAGTGATTGTGCTTTCTTGATTTTTCTTTTCTCATTATTCTTAAATCCTCCTTTTTT-TATTTGCATCT----CAGTTCATTTATACTCGGG--AAGTGCAAGACGTGGCTACTAGAAAGAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACTTCCTAAATGTTGACCACAGTGGATGCAAATGGCTCTGT-----GCATCATCTGTTAAATATGGTCAGATGACCACCCAGGTTCAAGTGGTTTGTCACCAGGGTGATACGAGCCACACGGAGTGCCCTCCTCAGAGGCCATGTCTCAGAGACATTTATTTTGAGTGGTTTTCCAGTGAGTGATGCAAGATTTATGATCTATTTTAACAGCCTGCTTTTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179964170 966 - 181584905 TTCTTATCAGTGTGCGAATACTGGACGTTCAGGCGGC-GGAAATCCGGGTCCTTG-GGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATTGATCCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGAACACCTGACTGCGGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCCGATTCTGTGTATAGTTTG-CCTTTCCAGAT-CCGTGCCATTTAAGCTAGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGGCTCCTCGTTATTAGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTACGGCTGCTGGACACTGCCTCACTGCG-CTGTGCGTGGGG------------GGATGCCTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATACGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTGCTCTAGTGATTGTGCTTTCTTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCATCT----CGGTTCCTTTATACTTGGG--AAGTGCAAGACATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAGGCTACAATTTGGCAAATCTTAGCTTAAAACGTCCTAAATGTTGACCACAGTGGGTGCAGATGGCTCTGT-----GCATCATCTGTGAAATGTGGTCAGATGACCACCCAGGTTCAAGTGGTTTGTCACCAGGGTGGTACGAGCCACACAGAGTGCCCTCCCCAGAGGCCATGTCGCGGAGACATTTATTTTGAGTGGTTTTCCAGTGAGTGATGCAAGATTTATGATCCATTTTAACAGCCTGCTTTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 32935 965 + 174439528 TTCTTATCAGTGTGCGAATACTGGGCGTTAAGGCGGCGGGAAATCCGGGTCCTTG-GGTGTTGTGAGCTCCCTGCAGTTA-GTTCTTGCCAGTTTCAGCTCAATTGATCCCCCTCCCCTGCGGTATCATTGGACACATTTTACTTCATTGAACACCTGACTGCAGCTTTTTCTGTAATCCCTCAGGGGCAGTCATCTTTTCCGATTCTGTGTATAGTTTC-CCTTTCCAGAT-CTGTGCCATTTAAGCTAGAAAAGGGATCAGTTTTGAGATGTTGTGAAAATGTTAAAAGGCTCCTCGTTATTAGTGGGAAGTATCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTATGGCTGCTGGACACTGCCTCACTGCG-CTGTGCGTGGGG------------GG-TGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCCGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCCTTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTGCTCTAGTGATTgtgctttcttgatttttctcttttcattattcttaaatcctccttttttaaatttgcatct----cAGTTCCTTTATACTTGGG--AAGTGCAAGACATGGCTACTGGAAAAAGATGTCGAGAGAACCTGGAATCTAATAGGCTACAATTTGGCAAATGTTAGCTTAAAACGTCCTAACTGTTGACCACAGTGGATGCAGATGGCTCTGT-----GcatcatctgtgaaatgtggTCAGAtgaccacccaggttcaagtggtttgTCACCAGGGTGGTACGAGCCACACAGAGTGCCCTCCCCAGAGGCCATGTCGCAGAGACGTTTATTTTGAGTGGTTTTCCAGTGAGTGATGCAAGATTTATGATCCACTTTAACAGCCTGCttttt i papAnu2.chr6 M 570 C 0 s chlSab2.chr4 89534084 962 - 91010382 TTCTTATCAGTGTGCGAATACTGGGCGTTCAGGCGGCGGGAAATCCGGGTCCTTG-GGTGTTGTGAGCTCCCTGGAGTTACCTTCTTGCCAGTTTCAGCTCAATGGATCCCCCCTCCCCTGGGAA-----GGTCACGTTTTACTTCATTGAACACCTGACTGCCGCCTTTTCTGTAATCCCTTGGGGGCAGTCATCTTTTCTGATTCTGTGTATAGTTTC-CCTTTCCAGAT-CCGTGCCATTTAAGCTCGAAAAGGGGTCGGTTTTGAGATGTTGTGAAAATGTTGAAAGGCTCCTCGTTATTCGTGGGAAGTACCTGATGTTGCCAGAGACTGGA-CTGGGGCGCGGGGAGCACTAGGGCTGCTGGACACTGCCTCACTGCG-CTGTGCGTGGGG------------GGATGCTTCATTCAGCCTTACTGCCTAATGATTTGTGAGGATTTGTGTTTTCACAGTAACATGTTTACCTTATATTCTGACATCAGTTCCTGATATGTGACGTGTGGGCCACAGATGCTGGTGTATTATTTCACATGCATTTATATAGATTGTTTTCAGGGAATTCAGAAATTCTGTTATCTCTGCTCTAGTGATTGTGCTTTCTTGATTTTTCTCTTTTCATTATTCTTAAATCCTCCTTTTTTAAATTTGCATCT----CAGTTCCTTTATACTTGGG--AAATGCAAGGCATGGCTACTGGAAAAAGATGTCAAGAGAACCTGGAATCCAGTAAGCTACAATTTGGCAAATCTTAGCTTAAAACGTCCTAAATGTTGACCACAGTGGATGCAGATGGCTCTGT-----GCATCATCTGTGAAATGTGGTCAGACGACCACCCAGGTTCAAGTGGTTTGTCACCAGGGTGATACAAGCCTCACAGAGTGCCCTCCCCAGAGGCCATGTTGCAGAGACATTTATTTTGAGTGGTTTTCCAGTGAGTGATGCAAGGTTCATGATCCATTTTAACAGCCTGCTTTCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 180757 971 - 204313951 TTCTTATCAGTGTGGGAATACTGGGCGTTCGGGCA---GGGAATCTGGGTCCTTG-CG-ACTGGGGGCTCTCTGGAGTTACCTTCTTGCCAGTTTCGGCTCAGTTGAT-CCCCTCCCCTGCAGTACCTTTAGACACATTTTACTTCGTTGAACACCTGACTGC--CCGTTCCCGTATTCCCTCA--TGCAGTCATCTTTTCCCATCCAGTGTATAGTTTATCTTTTCCAGATCCCGTGCCATTTAAGCTGGAAAGGGGGTCAGTTTTGAGA---TGTGAAAATGTTGTGAGGCTCCTCTTTATTAGTGGGAAATATCTGACGATTCCAGAGATTGGA-CTGGGGTGCGGGGAGCATCATGGCTGCTAGACGCTGCCTCACTGTGACTGTGCTGCGGG----GGCGGGAGGG-GGCTGGATTCAGCCTTACTGCCTATTGATTTGTGAGGATTTGTGTTTTCAGAGTGACATGTTCACCTTGTATTCTGACAT--GTTCCTAATGTGTGATGTGTGGGCTACGGATGCTGGGGTATTATTTCACATGCATTTACGTAGACTGATTGCAGGGAACTAAGAAATTCTGTTGTCTCTGCACCAGTGATTGTGCTTTCTTGATTTTCCTCTTTTCATTATTCTTAAATCCCCCTTTTTA-AATTTGCATCTTTGCCAGTTCATTTATACTCGGGGTAAGTGCAGGACAGGGCCACTAGAAAAAGGCGCCAGGAGAAGCTGGAATCCAGTAGGCTGCAGTTTGGCAGATCATAGCTTAAACCGTCCTAAATGTTGACCACAATAGATGCAAGTGGCTCTGTGTGTCGCATCACATGTTAAATACAGTCAGATGACCACCCAGGTTCACGTGGTTCATCACT--GGTGATACAAGCCCCACGGAGTGCCCTCCTCAGCGGCCATGTCTCAGAGATGTTCATTTTGAGAGGTTTTCCAGTGAGTGATGCAAGATTTATGATCCATTTTAGCAGCCTGCttttt i calJac3.chr2 C 0 I 1023 a score=1329672.000000 s hg38.chr3_KI270935v1_alt 8292 766 + 197351 ATGCATTTGCTCAAATTTTTAGATTTTAAGTTTAGTTTTAGGTTTTCTGTT-AATTTGCTCAACTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCATGGTAGCCTGCCCTCCTTGGCAGGCTCCACTGGAGTGCCTTGGGGCCTGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgccgttact-gggagggagtattgaggaaatgcatgcgaggtgcct-ccgtgattcctggcacggagcaagtgctcagtaattgtcagctgtgagtattAGTAGTAGCTAATACACTACTACTATTCTTGGCTAACAAGCCAGCTCAAAGCTTTGATGGTTTTCCATTACCTGATGATGGTGATGATGGTTTCCACTTCCTGAACACTCACACCCCTGGGCTAGGCACTTAACCCAAATCCAAGGTCAGCGTTATTgtttggaggt--gggggagacacctcctgctctgactcgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgccccagttcagctggtcctcaaagcgtatatagctctttaaccctcagcaagtgtcagtcagaacataatcttgatttcagctgctactaaatatctaccaggagcctgcttgagagagagaattgcctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctggcttaacccaagctgtgtatggggaccctctcaccgtggtcccaatggagtcgcttttGTTAGGCGCC s panTro4.chr3 632440 766 - 202329955 ATGCATTTGCTCAAATTTTTAGATTTTAAGTTTAGTTTTAGGATTTCTGTTAAACTTGCTCAACTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCATGGTCGCCTGCCCACCTTGGCAGGCTCCACTGGAGTGCTTTGGGGCCTGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgccgttact-gggagggagtattgaggaaatgcatgcgaggtgctt-ccgtgattcctggcacggagcaagtgctcagtaattgtcagctgtgagtattAGTAGTAGCTAATACACTACTACTATTCTTGGCTAACAAGCCAGCTCAAAGCTTTGATGGTTTTCCATTACCTGATGATGGTGATGATGGTTTCCACTTACTGAACACTCACA-CGCTGGGCTAGGCACTTAACCCAAATCCAAGGTCAGCGTTATTgtttgggggt--gggggagacacctcctgctctgactcgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgcccaagttcagctggtcctcaaagcatatatagctctttaaccatcagcaagtgtcagtcagaatgtaatcttgatttcagctgctactaaatatctaccaggagcctgcttgagagagagaattgcctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctgacttaacccaagctgtgtatcgggaccctctcaccatggtcccaatggagtcgcttttGTTAGGCGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199661839 767 + 202140232 ATGCATTTGCTGAAATTTTTAGATTTTAGGTTTAGTTTTAGGTTTTCTGTTAAACTTGCTGAACTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCATGATAGCCTGCCCACCTTGGCAGGCTCCACTGGAGTGCTTTGGGGCCCGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgccattact-gggagggagtattgaggaaatgcatgtgaggtgtttcccgtgattcctggcacagagcaagtgctcagtaattgtcagctgtgaatattAGTAGTAGCTGATACACTACTACTGTTGTTGGCTAACAAGCCAGCTCAAAGCTTTGATGGTTTTCCATTACCTGACGACGGTGATGATGGTTTCCACTTACTGAACGCTCACA-CGCTGGGCTAGGCACTTAACCCAAATCCAAGGTCAGCGTTATTGTTTGGGGAT--GGGGGAGACACCTCCCGCTCTGACTTGTGtgtttgggttcccgtattttcaccagagggcgttagtcctgccccagttcagctggtcctcaaagcatatatagctctttaaccatcagcaagtgtcagtcagaacataatcttgatttcaactgctactaaatatctaccaggagcctgcttgagagacagaattgcctgacaggtgacgagtccaccattcctgagatactttgaaatcagtgtctggcttaacccaagctgtgtatcgggaccctctcaccgtggtcccaatggagtcactttTCTTAGGCGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120771265 767 + 123690457 ATGCATTTGCTCAAATTTTTAGATTTTAGGTTTAGTTTTAGGTTTTGTGTCATACTTGCTCAACTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCATGATAGCCTGCCCACCTTGGCAGGCTCcactggagtgc-ttggggcctgcctggattctagtcctggctctaccaGGTTTGTGTcctcgccgttact-gggagggagtattgaggaaatgcatgcgaggtgcttcccgtgattcctggcacagagcaagtgctcagtaattgtcagctgtgagtattAGTAGTAGCTAATACACTACCATTATTCTTGGCTAAGAAGCCAGCTCAAAGCTTTGATGG-TTTCCATTACCTGATGATGGTGATGATGGTTTCCAGGTACTGAACGCTCACACCGCTGGGCTAGGCGCTTAACCCAAATCCAAGGTCAGCATTATTGTTTGGGGTTC-GGGGGAGACAcctcctgctctgacttgtgtgtttgggttcccgtattttcaccagagggtgttagtcctgccccagttcagctggtcctcaaagcatatgtagctcttgaaccatcagcaagtgtcagtcagaacatcatcttgatttcagctggtactaaatatctaccaggagcctgcttgagagagagaattgcctgacaggtgctgagtccaccattcctgagatactttgaaatcagtgtctggcttaacccaagctgtgtatggggaccctctcaccgtggccccaatggagtcactttacttaggcgcC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179965136 768 - 181584905 ATGCGTTTGCTCAGGTTTTTAGATTTTAGGTTTAGTTTTAGGTTTTCTGTTAAACTTGCTCACCTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCGTGAAAGCCTGCCCACCTTGGCAGGCTCCACTGGAGTGCTTTGGGGCCTGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgctgttactgggggggggatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcatggagcaagtgctcagtgactgtcagctgcgattattAGTAGTGGCTAATACACGACCACTGTTCTTGGCCAACAAGCCCGCTCAAAGCTTTGATGGTTTTCCGTCACCTAATGATGGTGATGATGGTTTCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGTCAGCATTATTGTTTGGGGGTTGGGGGCAGACACCTCCTGCTCTGACTTGTGTGTttgggttcccatattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcatatatagctctttaataatcagcaagtatctgtcagaacataatgttgatttcagctgctactaaatatctaccaggagcctgcttgagagagagaattgcctgacaggtgctgagtcccccattcctgagatactttgaaatgagtgtctggcttaacccaagctgtgcatcggga-cctctcactgtgttcccaatggagtcacttttCTTAGGCACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 33900 762 + 174439528 atgcgtttgcttaggtttttagattttaggtttagttttaggttttCTGTTAAACTTGCTCACCTAGGAGTGGTGGTCAAATACAGGACCTCATTAGTGTGAAAGCCTGCCCACTTTGGCAGGCTCCACTGGAGTGCTTTGGGGCCTGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTCCTCGCCGTTACT-GGGAGGGAATATTGAGGAAATGCATGCGAGGTGCTTCCCGTGA-TCCTGGCATGGAGCAAGTGCTCAGTGACTGTCAGCTGCGGTTATTAGTAGTGGCTAATACACGACCACTGTTCTTGGCCAACAAGCCCGCTCAGAGCTTTAATGGTTTTCCATCAcctaatgatggtgatgatggtttcCACTTACTGAACACTCACA-CGTTGGGCTAGGCACTT-----AAATCCAGGGTCGGCATTATTgtttgggggttgggggcagaCACCTCCTGCTCTGACTTGTGTGTTTGGGTTCCCGTATTTTCACCAGAGGGTGTTAGTCCTGCCCCACTTCAGCTGGTCCTCAAAGCATATATAGCTCTTTAATCATCAGCAAGTATCTGTCAGAACATAATGTTGGTTTCAGCTGCTACTAAATATCTACCAGGAGCCTGCTTGAGAGAGAGAATTGCCGGACAGTTGCTGAGTCCCCCATTCCTGAGATACTTTGAAATGAGTGTCTGGCTTAACCCAAGCTGTGCATCGGGA-CCTCTCACTGTGTTCCCAACGGAGTCACTTTTCTTAGGCACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89535046 763 - 91010382 ATGCGTTTGCTCAGGTTTTTAGCTTTTAGGTTTAGTTGTAGGTTTTCTGTTAAACTTGCTCACCTAGGAGTGGTGGTCAAATACTGGACCTCATTAGCATGAAAGCCTGCCCACCTTGGCAGGCTCCACTGGAGTGCTTTGGGGCCTGCCTGGATTCCAGTCCTGGCTCTACCAGTTTTGTGTcctcgctgttact-gggagggaatattgaggaaatgcatgcgaggtgcttcccgtga-tcctggcacggagcgagtgctcagtgactgtcagctgcgattattAGTAGTGGCTAATACATGACCACTGTTCTTGGCCAACAAGCCTGCTCAAAGCTTTGATGGTTTTCCGTCACCTAATGATGG---TGATGGTTTCCACTTACTGAACACTCACA-TGCTGGGCTAGGCACTTAACCCAAATCCAGGGTCAGCATTATTGTTT-GGGGTTGGGGGCAGACACCTCCTGCTCTGACTTGTGTGTttgggttcccgtattttcaccagagggtgttagtcctgccccacttcagctggtcctcaaagcatatatagctctttaatcatcagcaagtatctgtcagaacataatgttggtttcagctgctactaaatatctaccaggagcctgcttgagagagagaattgcctgatgggtgctgagtccaccattcctgagatactttgaaatcagtgtctggcttaacccaAGCTGTGCATGGGGA-CCTCTCACTGTGTTCCCAATGGAGTCACTTTTCTTAGGCACC i chlSab2.chr4 C 0 C 0 e calJac3.chr2 181728 1023 - 204313951 I a score=353269.000000 s hg38.chr3_KI270935v1_alt 9058 173 + 197351 CCCCTTTACCTT-GGGCTCTGAGCTTCCTCTGCCTTTCATCTCTGCAGGATGAAGCCCCACTCGCCCTTCAGGATGC------------------AAAGCCCT-CCTCTATAAAGTGCATGCGG----ggccagatgcagtggctcacgtctgacctcccaacactttgggaggccgaggcagggggatc--------------gtttgag s panTro4.chr3 633206 173 - 202329955 CCCCTTTACCTT-GGGCTCTGAGCTTCCTCTGCTTTTCATCTCTGCAGGATGAAGCCCCACCCGCCGTACAGGATGC------------------AAAGCCCT-CCTCTATAAAGTGCGTGCGG----ggccagatgcagtggctcacgtctgacctcccaacactttgggaggccgaggcagggggatc--------------gtttgag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199662606 188 + 202140232 CCACTTTACCTTGGGGCTGTGAGCTTCCTCTGCCTTTCATCTCTGCAGGATGAAGCCCCACCTGCCCTTCAGGATGC------------------AAAGCCCT-CCTCTATAAAGTGCGTGCAG----Ggccagatgcagtggctcacatctgacctcccaacactttgggaggccgaggcagggggattgcttgagcccaggagtttgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120772032 188 + 123690457 CCCTTTTGCCTT-GGGCTCTGAGCTTCCTCTGCCTTTCATCTCTGCAGAATGAAGCCCCACCTGCCCTTCAGGATGC------------------AAAGCCCC-CCTCTATAAAATGCGTGCAG---Tggccaggtgcagtggctcacgtctgacctcccaacactttgggaggccgaggcaggggtatcgcttgagcccaggagtttgag i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179965904 186 - 181584905 CCCCTTTACCTT-GGGCTCTGAGCTTCCTCTGCCTTTCATCTCTGTAGGATGAAG-CCCACTTGCCCTTCAGGATGC------------------AAAGCCCT-CTTCTCTAAAGTGCCTGCCG----ggccaggtgcagtggctcacgcctgacctcccaacactttgggaggccgaggcagggggatcgcttgagcacaggagtttgag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 34662 186 + 174439528 CCCCTTTACCTT-GGGCTCTGAGCTTCCTCTGCCTTTCATCTCTgtaggatgaag-cccacttgccCTTCAGGATGC------------------AAAGCCCT-CTTCTCTAAAGTGCCTgccg----ggccaggtgcagtggctcacgcctgacctcccaacactttgggaggccaaggcagggggatcgcttgagcacaggagtttgag i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89535809 186 - 91010382 CCCCTTTACCTT-GGGCTCTGAGCTTCCTCTGCCTTTCATCTCTGTAGGATGAAG-CCCACTTGCCCTTCAGGATGC------------------AAAACCCT-CTTCTCTAAAGTGCCTGCCG----ggccaggtgcagtggctcacgcctgacctcccaacactttgggaggccaaggcagggggatcgcttgagcacaggagtttgag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 182751 196 - 204313951 CCCCTTTGCTTT-GAGCTCTTAGCTTCCACTGCCTTTCATCTTTGTAGGATGAAGCCCCACCCGCCCTTCAGGATGccagccttggcaacattgtaagaccttgtttctacaaaaagtaaacaatattagccaagtgtggtggtacatgcctatagtcctagctactcaggaggctgagataggaagatcacttgag-------------- i calJac3.chr2 I 1023 T 885 a score=78778.000000 s hg38.chr3_KI270935v1_alt 9231 41 + 197351 accagcctggacaacattgtgagaccctgttcctTGAATTG s panTro4.chr3 633379 41 - 202329955 accagcctggacaacattgtgagaccctgttcctTGAATTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199662794 41 + 202140232 accagcctgggcaacattgtgagaccctgttcctTGAATTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120772220 41 + 123690457 accagcctgggcaacattgtgagaccctgttcctTGAATTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179966090 41 - 181584905 accagcctgggcaacattgtgaggccctgttcctTGAATTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 34848 41 + 174439528 accagcctgggcaacattgtgaggcCCTGTTCCTTGAATTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89535995 41 - 91010382 accagcctgggcaacattgtgaggccctattcctTGAATTG i chlSab2.chr4 C 0 C 0 e calJac3.chr2 182947 885 - 204313951 T a score=1729641.000000 s hg38.chr3_KI270935v1_alt 9272 802 + 197351 CCCTGGGAGATTTCCTCAGCTTGTACTGGAGGTGTGTGGCCCCATGAAGCCCATAGTCACCGTTCACCCTGAGAGACGCTGGCTTTGGGGCTGACACACCTGCTGCGGGGCAGCCCCAGGAGATGGCCACCCTGTTTCT-CCTGGAGCTGGAGCTGCG-CGTCTTCTCAGAAACTGTGGTGGCTGTCctgttttgtttgcatcttataaacc-tttacctgattacattttcctcttcaatttagctgctagaaaacttaaagtcagattggtggctcaccAGTAATGAGAGTTTAGAG---TAGAGGTAAACTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGATTCACATTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGGTTTCTGGTCCATCTCATAGCCTCAGGCAGTGGGC---GGTGCTGTCCGTGCTCCCTTTCTGGGTTACCTGTGGTAGCTCTGAAGTTGCAGGGCTGCGATTTGAAGCCTGATTTAGTACACCGTGTTTCTGTTGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCATTCACCCTGTGGCCCTGTGTTTTTCCACCACACCTCTGCCTGGTGGCATCCTACTGGATGTCTCAGCTGAGCCACTCTGTTCTGAAGATGCCCTTGTCCTCCACCCCTTTGCTTTGGGCTCTGAGCTTCTTCTGCCTTTCATCTCTGTAGGATGAAGCCCCACCCGCCCTTCAGGATGccagccttggcaacatt s panTro4.chr3 633420 800 - 202329955 CCCTGGGAGATTTCCTCAGCTTGTACTGGAGGTGTGTGGCCCCATGAAGCCCATAGTCACCGTTCACCCTGAGAGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGGCCACCCTGTTTCT-CCTGGAGCTGGAGCTGCG-CGTGTTCTCAGCAACTGTGGTGGCTGTCCTGTTTTGTTTGCATCTTGTAAATC-tttacctgattacatttgcctcttcaatttagctgctagaaaacttaaagtcagattggtggctcgcCAGTAATGAGAGTTTAGAG---TAGAGGTAAACTTTATGACATAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGGTTCACATTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGGTTTCTGGTCCATCTTATAGCCTCAGGCAGTGGGT---GGTGCTGTCCGTGCTCCCTTTCTGGGTTACCTGCGGTAGCTCTGAAGTTGCGGGGCTGTGATTTGAAGCCTGATTTAGTACACCGTGTTTCTGTTGTGTTCTGTGGTGGTTTGCTCCTCACATGTGAGCATTCACC--GTGGCCCTGTGTTTTTCCACCACACCTCTGCCTGGTGGCATCCTACTGGATGTCTCAGCTGAGCCACTCTGTTCTGAAGATGCCCTTGTCCTCCACCCCTTTGCTTTGGGCTCTGAGCTTCTTCTGCCTTTCATCTCTGTAGGGTGAAGCCCCACCCACCCTTCAGAATGccagccttggcaacgtt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199662835 802 + 202140232 CCCTGGGAGATTTCCTCAGCTTGTGCTGGAGGCATGTGGCCCCATGAAGCCCATAGTCACCGTTCACCCTGAGAGATGCTGGCTTTGGGGCTCACACGCCTGCTGTGGGGCAGCCCCAGGAGATGGCCACCCTGGTTCT-CCTGGAGCTGGAGCTGTG-CGTGTTCTCAGCAACTGTGGTGGCTGTTCTGTTTTGTTTGCATCTTATAAACC-TTtacctgattacattttcctcttcaatttagctgctagaaaacttaaagtcagattggtggctcaccagtaatgagagtttagag---tagaggtaaactctatgacatagtcttaga-ctcttcactttctcctcagccatcatgattcacatttactttattttgctgtactgtgagtgtcttt-gtgtttcctgaattccttctgggataaggcaggttgttagtaTGCACAGGTTTCTGGTCTATCTCATAGCCTCAGGCAGTGGGC---GGTGCTGTCCGTGCTCCCTTTCTGGGTTACCTGTGGTAGCTCCGAAGTTGCAGGGCTGTGATTTGAAGCCTGATTTAGTACACCGTGTTTCTGTCATGTTCTGTGGTGGCTTGCTCCTCACATGTGAGCATTCACCCTGTGGCCCTGTGTTTTTGCACCACACCTCTGTCTGGTGGCATCCTACTGGATGTCTCAGCCGAGCCACTCTGTTCTGAAGATGCCCTTGTCCTCCACCCCTTTGCTTTGGGCTCTGAGCTTCTTCTGCCTTTCATCTCTGTAGGATGAAGCCGCACCCACCCTTCAGGATGccagccttggcaacatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120772261 793 + 123690457 CCCTGGGAGATTTCCTCAGCTTGTGCTGGAGGCATGTGGCCCCATGAAGCCCGTAGTCACGGTTCACCCTGAGAGACGCTGGCTTTGGGGCTCACATGCCTGCTGT-GGGCAGCCCCAGGAGATGGCCACCCTGTTTCT-CCTGGAGCTGGagctgcg-cgtcttctcagcaaccgtggtggcttttctgttttatttacatcttataaaccatttacccgattacattttcctcttcaatttagctgctagaaaatttaaagtcaggttggtggctcgccagtaatgagagtt--------tagaggtaaactttatgacatAGTCTTAGA-CTCTTCACTTTCTCCTCAGCCAACATGACTCACAGTTACTTTATTTTGCTGTACTGTGAGTGTCTTT-GTGTTTCCTGAATTCCTTCTGGAATAAGGCAGGTTGTTAGTAAGCACAGGTTTCTGGTCCATCTCGTAGCCTCAGGCAGTGGGC---GGTGCCATC--TGCTCCCTTTCTGGGTTACCTGTGGTAGCTCTCAAGTTGCGGGGCTGCGATTTGAAGCCTGATTTAATACACGGTGTTTCTGTCGTGTTCGGTGGTGGTTTGCTCCTCACGTGTGAGCATTCACCCCGTGGCCC--TGTTTCTCCACCGCACCTCTGCCTGGTGGCCTCCTACTGGATGTCTCAGCCGAGCCACTCTGTTCTGAAGACGCCCTTGTCCTCCACCCCTTTGCTTTGGGCTCTGAGCGTCTTCTGCCTTTCATCTCTGTAGGATGAAGCCCCACCTGCCCTTCAGGATGccagccttggcaacatt i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179966131 796 - 181584905 CCCTGGGACATTTCCTCAGCTTGTGCTGGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCCGAGGGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGGCCGCCCTGTTCCTCCCTGGAGCTGGAGCTGCAATGTGTGCTCAGCAGCTGTGGTGGCTGTTCTGTTCTGTTTGCGTCTTATAAACCATTTACCTGATTACATTTTCCTCTTCAATTTAGCTGCTGGAAAATTTAAAGTCTGGTTGGTGGCTCGCCAGTAATGAGAGTTTAGAG---TAGAGGTAAACTTTATGAC--AGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGGTTAACATTTACTTTATTTTGCTGTACT----GTGTCTTT-GTGTTTCCTGAGTTCCTTCTGGAATAAGGCGGGTCATTAGTGAGCACAGGTTTCTGGTC-GTCTCACAGCCTCAGGCAGTGGGC---GGTGCTGTCCGTGCTCCCTTTCC-GGTTGCCTGTGGTAGCTCTCAAGTTGCAGGGCTGCGATTTGAAGCCTGATGTAGTGCACCGTGTTTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACGTGTGAGCATTCACCCTGTGGCCCTGTGTTTTTCCACCACACCTCTGCCTGGTGGCATCCTACTGGATGTCTCAGCCGAGCCACTCTGTTCTG--GATGCCCTTGTCCCCAACCCCTTTGCTCTGGGCTCTGAGCTGCTTCTGCCTTTCATCTCTGTAGGATGAAGCCCCACCCACCCTTCAGGATGccagccttggcaacatc i macFas5.chr6 C 0 I 293 s papAnu2.chr6 34889 798 + 174439528 CCCTGGGAGATTTCCTCAGCTTGTGCTGGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCTGAGGGACGCTGGCTTTGGGGCTCACACGCCTGCTGCGGGGCAGCCCCAGGAGATGGCCGCCCTGTTCCTCCCTGGAGCTGGAGCTGCAATGTGTGCTTAGCAGCTGTGGTGGCTGTTCTGTTCTGTTTGCATCTTATAAACCATTTACCTGATTACATTTTCCTCTTCAATTTAGCTGCTAGAAAATTTAAAGTCCGGTTGGTGGCTCGCCAGTAATGAGAGTTTACAG---TAGAGGTAAACTTTATGACAGAGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACGTGGttaacatttactttattttgctGTACT----GTGTCTTT-GTGTTTCCTGAGTTCCTTCTGGAATAAGGCAGGTCATTAGTAAGCACAGGTTTCTGGTC-GTCTCACAGCCTCAGGCAGTGGGC---GGTGCTGTCCGTGCTCCCTTTCC-GGTTGCCTGTGGTAGCTCTCAAGTTGCAGGGCTGTGATTTGAAGCCTGATGTAGTGCACCGTGTTTCTGTCGTGCTCTGTGGTGGTTTGCTCCTCACATGTGAGCGTTCACCCTGTGGCCCTGTGTTTTTCCACCGCACGTCTGCCTGGTGGCATCCTACTGGATGTCTCAGCCGAGCCACTCTGTTCTG--GATGACCTTGTCCCCAACCCCTTTGCTCTGGGCTCTGAGCTGCTTCTGCCTTTCATCTCTGTAGGATGAAGCCCCACCCGCCCTTCGGGATGCCAGCCTtggcaacatc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89536036 798 - 91010382 CCCTGGGAGATTTCCTCAGCTTGTGCTGGGGGCATGTGGCCCCATGAAGCCCGTAGTCACTGTCCACCCTGAGGGACGCTGGCTTTGGGGCTCACATGCCTGCTGCGGGGCAGCCCCAGGAGATGGCCGCCCTGTTCCTCCCTGAAGCTGGAGCTGCACTGTGTGCTCAGCAGCTGTGGTGGCTGTTCTGTTCTGTTTGCATCTTATAAGCCATTTACCTGATTACAGTTTCCTCTTCAATTTAGCTGCTAGAAAATTTAAAGTGCGGTTGGTGGCGCGCCAGTAATGAGAGTTTAGAG---TAGAGGTAAACTTTGTGACAGAGTCTTAGACCTCTTCACTTTCTCCTCAGCCAACATGGTTAACATTTACTGTATTTTGCTGTACT----GTGTCTTT-GTGTTTCCTGAGTTCTCTCTGGAATAAGGCAGGTCATTAGTAAGCACAGGTTTCTGGTC-GTCTCACAGCCTCAGGCAGTGGGC---GGTGCTGTCCGTGCTCCCTTTCT-GGTTGCCGGTGGTAGCTCTCAAGTTGCAGGGCTGCGATTTGAAGCCTGATTCAGTGCACCGTGTTTCTGTCGTGTTCTGTGGTGGTTTGCTCCTCACGTGTGAGCAGTCACCCTGTGGCCCTGTGTTTTTCCACCACACCCCTGCCTGGTGGCATCCTACTGGATGTCTCAGCCGAGCCACTCTGTTCTG--GATGCCCTTGTCCCCAACCCCTTTGCTCTGGGCTCTGAGCTGCTTCTGCCTTTCATCTCTGTAGGATGAAGCCGCACCCGCCCTTCAGGATGccagccttggccacatc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 182062 781 - 204313951 CCTTGGGAGGTTTCCTCAGCTTGTGCTGGGGGCATGTGGCCCCATGAAGCCTGTAGTCACTGTGGACCCTGAGAGATGCTGGCTTTGTGGCTCACGCGCCTGCTGTCGCGCAGCCCCAGGAGATGGCCGCCCTGTTTCTCCCTGGAGCTGGAGCTGCG-TGAGTTCTCAGCAGCTGTGGTAGCTGTTCTG-----TTTGCATCTTATAAACC------CTGATTACATTTTCATCTTCAATTTCGCTGCTAAAACATTTAACGTCAGATATGTGGCTCACCAGTAATGAGAGTTCAGAGTTTTCGAGGTAAACT-TGTGACATGGTCTTAA--CGCTTCACGTTCCCCTTAGGGAACGCAATTAAGAGGTGCTTCATTTTGCTGCACTGTGAAAGTCTTTCATGTTTCCTGAATTCCTTCTGAAATGAGGCCAGCTGCTAGTGAGTACAGGTTTCTGGTCCTTCTCACAGCCTCGGGCAGTGGGCTGTGGTGCTGTCCATGCTCCCCTTCGGTGTTGCCTGTGGTAGCTCTCCAGCTGC-GGGCTGAGATCTGAAGCCTGATTTA---------GTTTCTCTCATGTGCTATGGT-------TTCTCACATGTGAGCATACACCCTGTGGCCCTGTGTTTTCCCACCATACCTCTGCCTGTTGGCATCCTACTGGATGTCTCAGCCCAGACATTTTGTTCCTCAGATTCCGTTGTCCCCCACCCCTTTGCTTTGAGCTCTTAGCTTCCACTGCCTTTCATCTTTGTAGGATGAAGCCCCACCCGCCCTTCAGGATGccagccttggcaacatt i calJac3.chr2 T 885 C 0 a score=1726767.000000 s hg38.chr3_KI270935v1_alt 10074 820 + 197351 gtgagaccctgtttctacaaaaagtaaac------------gtgtagtggtgcacgcctgtagttccagctacttgggaggctgagatgggaagatcacttgagcctgggaggttgaggctgcattgagctgagatcaa-------gccacggcactccagcctgggagacagagcgaaaccccatctcaaaa-aaacaaagaaaG------TGGATGCGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCTGATATGCGCCTTTTTCCTCATCGTGGGGGCTCAtgttttcgtacttttctctcgctactagattgtgagctgcgtgaaggaaggTTCATAGTCGTGTTGTATGTACAGGCACACAAAATTTGTGCTTGGATAGACACATATCAATCCGCTTCCTTCTCCTCTCTGAGTTTCTTTATTT-AAAAAAAAAAttagagatggagtctcactgtcttgcccaggctggtctcaaactcctaggctcaagcgatcctcccgcctcTACTAATATGAATTATTAGCCTATACTAATATGAATTCCTATACTAATATGATTGAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAACTAAATTATTAGGCTATTTCAAGA----AATTAATATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACTTCAGTTAAATTTGTGCTTCTGAGTGCTTGTAT------------------------------------------------------TGTAGGTGAAACCGCACTGAGAAGGTATTTGTGGCCCGTATGCTGATTGATTGATGAGACTTC-TTTGCACAGGAGAGCTGCTAAAAATTATTAC---------------- s panTro4.chr3 634220 821 - 202329955 gtgagaccctgtttctacaaaaactaaac------------gtatagtggtgcacgcctgtagttccagctacttgggaggctgagatgggaagatcacttcagcctgggaggttgaggctgcattgagctgagatcaa-------gccacggcactccagcctgggagacagagcgaaaccccatctcaaaa-aaacaaagaaaG------TGGATGCGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCTGATGTGCGCCTTTTTCCTCATCGTGGGGGCTCATGTTTTCGTACTTTCCTCTCACTACTAGATTGTGAGCTGCGTGAAGGAAGGTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCCTTGGATAGACACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTTATTTAAAAAAAAAAAttagagatggagtctcactgtcttgcccaggctggtctcaaactcctaggctcaagcgatcctcccgcctcTACTAATATGAATTATTAGCCTATACTAATATGAATTCCTATACTAATATGATTGAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAACTAAATTATTAGGCTATTTCAAGA----AATTAATATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACTTCAGTTAAATTTGTGCTTCTGAGTGCTTGCAT------------------------------------------------------TCTAGGTGAAACCGCACTGAGAAGGTATTTGTGGCCCGTATGCTGATTGATTGATGAGACTTC-TTTGCACAGGAGAGCTGCTAAAAATTACTGC---------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199663637 817 + 202140232 gtgagaccctgttgctacagaaactaaaca----------agtgtggtggtgcacgcctgtagtcccagctacttgggaggctgagatgggaagatcacttgagcctgagagattgaggctgcattgagctgagatcaa-------gccactgcactccagcctgggagacagagcgaaaccccgtctcaaaa-aaacaaagaaaG------TGGATGTGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCTGATGTGTGCCTTTTTCCTCGCCGTGGGGGCTCATGTTTTCATAGTTTCCTCTTGCTGCTAGATTATGAGCTGCATGAAGGAAGGTTCATAGTTGTGTTGTCTGTACAGGCACACAAAATTTGTCCTTGGATAGACACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTTATTT-AAAAAAAAAAttagagatggagtctcactgtcttgcccaggctggtctcaaactcctagcctcaagcgatcctcccccctctgcTAATATGAATTATTGGCCTATACTAATATGAATTCCTATACTAATATGATTCAAATTAGTTTGACTTCTATAA----TGTTCTCCCAG-ATT-GGCTTCTGTTTTGATAGTAGAACTAAATTATTAGGCTATTTCAAGA----AATTAATATATTACTGGTAGAAAACCTGAAGCTACAAAATGGCCTGGTTTGTCACTTCAGTTAAATTTGTGGTTGTGAGTGCTTGTAT------------------------------------------------------TCTAGGTGAAACCGCACTGAGATGGTATTTGTGGCTGGTATGCTGATTCATTGATTAGACTTC-TTTGCACAGGAGAGCTGCTAAAAATTACTGC---------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120773054 819 + 123690457 gtgagagcctgtttctacaaaaacgaaaca----------agtgtagtggtgcacgcctgcagtcccagctacttgggaggctgagatgggaagatcacttgagcctgggaggttgaggctgcattgagctgagatcaa-------gccactgcactctagcctgggagacagaacgaaaccccatctcaaaa-aaacaaagaaaG------TGGATGTGCGCTGCTCCTGCCATTGGATCATCGCAGCATTTTTCTTTTCTCTGATGTGCGCCTTTTTCCTCACCGTGGGGGCTCATGTTTTCGTAGTTCCCTCTCGCTACTAGATTGTGAGCTGTGTGGAGGAAGGTTCATAATTGTGTTGTATGTACAGACACACAAAATTTGTCCTTGGATAGACACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTTATTT-AAAAAAAAAA--agagatggagtctcattgtcttgcccaggctggtctcaaactcctaggcccaagcgatcctcccgcctcTACTAATATGAATTATTAGCCTGTACT-ATTTGAATTCCTATACTAATGTGATTGAAATTAGTTTGACTTGTATAATAATTGTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAACTAAATTATTAGGCTATTTCAAGA----AATTAATGTATTATTGGTAGAAAAACTGAAGCTACAAAATGGCCGGGTTTCTCACTTCAGTTAAATTTGTGCTTCTGAGTGCTTGTAT------------------------------------------------------TCTAGGTGAAACCGCACTGAGAAGGTATTTGTGGCCCGTTCGCTGATTCATTGATTAGACTTC-TTTGCACAGGAGAGCTGCTAAAAATTACTGT---------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179967220 815 - 181584905 gtgagaccctgtttctacaaaaagtcaacaaaatgaacccagtgtggtggtgcacgcctgtagtcccagctacttgggaggctgagatgggaagatcacttgagcctgggaggttgaggctgcattgagctgagatcaa-------gccacagcactccagcctgggagacagagcgaaaccctatctcaaaa-aaacaaagaaaG------TGGATGCGTGCTGCTCCTGCCATTGGGTCATCGCAGCATTTTTCTTTTCTCTGATGCGCACCTTTTTCCTCATCGTGGGGTCTCAtgttttcatagttccctctcactactggattgtgagctgcgtgaaggaaggTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCTTTGGACAGACACATATCAATCCACTTCCTTCTCCTCTCTGAATTTCTTTATAT-GAAAAAATAAttagagatggagtctcactgtctttcccaggctggtctcaaactcctaggctcaagtgatcgtccc------gcc-----------tcagcctATACTAATATGAATTCCTCTACTAATGTGATTGAAATTAGTGTGACTTCTATAAAAATTTTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAAGTAAATTGTTAGGCTATTTCAAGA----AATTAATATATTACTGGTAGAAAAACTGAAGCTACAAAATGGCCTGGTTTCTCACCTCAGTTAAATTTGTGCTTCTGAGTGTTTGTAT------------------------------------------------------TGTAGGTGAAACTGCACTGAGAAGGTATTTGTGGCCCGTACACTGATTCCTTGATGAGACTTG-TTTGCACAGGAGAGTTGCTAAAAATTACTGC---------------- i macFas5.chr6 I 293 I 16 s papAnu2.chr6 35687 822 + 174439528 gtgagaccctgtttctacaaaaagtcaacaaaatgaacccagtgtggtggtgcacgcctgtagtcccagctacttgggaggctgagatgggaagatcacttgagcccgggaggttgaggctgcattgagctgagatcaa-------gccacagcactccagcctgggagacagagcgaaaccttatctcaaaa-aaacaaagaaag------tggaTGCGTGCTGCTCCTGCCATTGGGTCAtcgcagcattttttttttctctgatgcgCACCTTTTGCCTCATCGTGGGGTCTCATGTTTTCGTAGTTCCCTCTCACTACTAGATTGTGAGCTGCGTGAAGGAAGGTTCATAGTTGTGTTGTATGTACAGGCACACAAAATTTGTCTTTGGACAGACACATATCAATCcgcttccttctcctctctgaatttctttatat-aaaaaaataattagagatggagtctcactgtctttcccaggctggtctcaaactcctaggctcacgCGAtcgtcccgcctcagcc-----------tcagcctaTACTAATATGAATTCCTATACTAATGTGATTGAAGTTAGTGTGACTTCTATAATAATTGTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAAGTAAATTATTAGGCTATTTCAAGA----AATTAATATATTACTGGTAGAAAAACTGAAGCTACAAAATAGCCTGGTTTCTCACCTCAGTTAAATTTGTGCTTCTGAGTGTTTGTAT------------------------------------------------------TGTAGGTGAAACTGCACTGAGAAGGTATTTGTGGCCCGTACACTGATTCCTTGATGAGACTTGTTTTGCACAGGAGAGCTGCTAAAAATTACTGC---------------- i papAnu2.chr6 C 0 I 16 s chlSab2.chr4 89536834 820 - 91010382 gtgagaccctgtttctacaaaaagccaacaaaaggaacccagtgtggtggtgcacgcctgtagtcccagcttcctgggaggctgagatgggaagatcacttgagcctgggaggttgaggctgcattgagctgagatcaa-------gccactgcactccagcctgggagacagagcaaaaccctatctcaaaa-aaacaaagaaaG------TGGATGTGTGCTGCCCCTGCCACTGGGTCATCGCAGCATTTTTCTTTTCTCTGATGCGCACCTTTTTCCTCATCGTGGGGTCTCATGTTTTCGTAGTTCCCTCTCACTACTGGATTGTGAGCTGCGTGAAGGAAGGTTCATAGTTGTGTTGTATGTACAGGCACACACAATTTGTCTTTGGACAGACACATATCAATCCGCTTCCTTCTCCTCTCTGAATTTCTTTATAT-AAAAAAA-AAttagagatggagtctcactgtctttcccaggctggtctcaaactcctaggctcaagcgatcgtcccgcctcagcc-----------tcAGCCTATACTAATATGAATTCCTCTACTAATGTGATTGAAATTAGTGTGACTTCTATAAAAATTGTTCTCCCAG-ATTGGGCTTCTGTTTTGATAGTAGAAGTAAATTATTAGGCTATTTCACGA----AATTAATATATTACTGGTAGAAAAACTGAAGCTACAGAATGGCCGGGTTTCTCACTTCAGTTAAATTTGTGCTTCTGAGTGTTTGTAT------------------------------------------------------TGTAGGTGAAACTGCACTGAGAAGGTATTTGGGGCCCGTACACTTATTCCTTGATGAGACTTG-TTTGCACAGGAGAGCTGCTAAAAATTACTGC---------------- i chlSab2.chr4 C 0 I 6291 s calJac3.chr2 182843 868 - 204313951 gtaagaccttgtttctacaaaaagtaaacaatattagccaagtgtggtggtacatgcctatagtcctagctactcaggaggctgagataggaagatcacttgagcctgggaggtggaggctgcgctgagctgagatcagctgagcccccgccgtactccagcctgggagacagagcgaaaccatggctcaGGGTGTACAGTGACAGGCTTCATGAACACATGCTGCTCCTGCCGTGGGATCAT--CAGCGTTGTTCTTGTCTCCGACGTGC-----------------------------CTTCGTAGTT-CCTCTCGATGCTAGATTGTGAGCTGGGTGAGGGAAGGGTCGTAGT-GTGTTGTACATACAGGCACAC--AATTTGGCCTTGGATACAGACATACCAGTTCGCTTCCTT---CTCTCTGAAtttctttattt-aaaaa---atttagagatggaatctcactgccttgcccgggctggtcccaaactcctaggctcaagcgatcctcccgcctcagcc-----------tcAGTGTATACATATATGAATTCCTATGTGAATATGATTGAAATTAGTTTGACTTCTATAATAATTGTTCTCCCAGAATTGGGCTTCTG-TTTGATAGTAGAACTAAATCATTAGGCTATATCAAGAAATTAATTAATATAATACCAGCAGAAAAACTGAAGCTGCAAAATGGCCTGGTTTCTCATTTCAGGTAAATTTGTGCTTCTGAGTGCTCGTGTTAAAATCTAGGTGAATATACCTGAATTGAACCTTAGACTGAAGGTAAAAAAAAATCTAGGTGAAGCCGCACTGAGAAGGTATTTGTGGCTTATACACTGGTTCCTTCACAAGACTTG-TTTGCACAGGAGAGCTGCTAAAAATTACTGCTCTCAGGGAGGTCTAC i calJac3.chr2 C 0 C 0 a score=578108.000000 s hg38.chr3_KI270935v1_alt 10894 284 + 197351 GGTGAACAGGTATGAAG-AAGA---CTGTTCTCTGCCCTTCTTTTTGCAATAAAATGTTACAAAC-TATCTTGAGATTGATCCCTTTTCGGGTGTTTGGG--------TTTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGGTTTCCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAAGTTGTACTTTAAAAAATAATAATTCTTACATTCGTTTGAAGGttttttgtttgtttgtttgtttgtttttgagatgaag s panTro4.chr3 635041 280 - 202329955 AGTGAACAGGTATGAAG-AAGA---CTGTTCTCTGCCCTTCTTTTTGCAATAAAATATTACAAAC-TATCTTGAGATTGATCCCTTTTCGGGTGTTTGGG--------TTTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGGTTTCCCTTAATAT------AACACTGTTGTATTTGTAAGGGGCATTTTTAAAGTTGTACTTTAAAAAATAATAATTCTTACATTCGTTTGAAGGTTT----Tttgtttgtttgtttgtttttgagatgaag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199664454 279 + 202140232 GGTGAACAGGTATGAAG-AAGAAGGCTGTTCTCTGTCCTTCTTTTTGCAATAAAATGTTACAAAG-TATCTTGAGTTTGATCCCTTTTTGGGTGTTTGGA--------TTTTTTTT----AACATTCACATATTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGCGGGTTTGCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAAGCTGTACTTTAAAAAATAATAATTCTTACATTTGTTTGAAGGttt--------tttgtttgtttgtttttgaaatggag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120773873 284 + 123690457 GGTGAACAGGTATGAAG-AAGAAGGCTGTTCTCTGCCCTTCTTTTTGCAGTAAAATGTTACAAAC-TATCTTGAGTTTGATCCCTTTTCGGGTGTTTGGG--------TTTTTTTTTTTAAACATTCACATGTTTCTTGGAATTATAAGAAATTAACTT-----------TGTGCTTCTGAAGTGGGTTTGCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAAGCTGTACTTTAAAA---AATAATTCTTACATTCGTTTGAAGGttg----tttgtttgtttgtttgtttttgagatggag i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 179968051 284 - 181584905 GGTAAACAGGTATGAAG-AAGAAAACTGTTCTCTGCCCTTCTTTTTGCAATAAAATGTTACAAAC-TATCTTGAGTTCGATCCC-TTTCGGGTGTTTGGGtttttttttttttttttttAAACATTCACATATTTCTTGGAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGGTTTGCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAAGCTGTACTTTAAAAAATAA----TCTTACATTCTTTTGAAGGTTT---------TT-TTTGTTTGTTTTTGAGACGGAG i macFas5.chr6 I 16 N 0 s papAnu2.chr6 36525 282 + 174439528 GGTAAACAGGTATGAAG-AAGAAAACTGTTCTCTGCTCTTCTTTTTGCAATAAAATGTTACAAAC-TATCTTGAGTTCGATCCC-TTTCGGgtgtttggg------tatttttttttttaaacattcacaTATTTCTTGTAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGGTTTGCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAagctgtactttaaaaaataataattcttacattctcttgaaggttt---------tt-tttgtttgtttttgagacggag i papAnu2.chr6 I 16 C 0 s chlSab2.chr4 89543945 284 - 91010382 GGT-AACAGGTATGAAG-AAGAAAACTGTTCTCTGCCCTTCTTTTTGCAATAAAATGTTACAAAC-TATCTTGAGTTCGATCCCTTTTCAGGTGTTTGGG-----TTTTTTTTTTTTTTAAACATTCACATATTTCTTGGAATCATAAGAAATTAACTT-----------TGTGCTTCTGAAGTAGGTTTGCCTTAATAT------AACACTGATGTATTTGTAAGGGGCATTTTTAAAGCTGTACTTTAAAAAATAATAATTCTTACATTCTTTTGAAGGttt---------ttgtttgtttgtttttgagacggag i chlSab2.chr4 I 6291 C 0 s calJac3.chr2 183711 299 - 204313951 GGTTAACAGGTATGAAGAAAGAAGACTGTTCTCTGCACTTCTTTTTACGATAACATGTTACAGACTTATCTTGAGTTTGATCCCTTTTTGGATGTTTGGG---TTTTGTGTTTTTTTTTTAACATTTACATATTTCTTGGAATTATAAGAAATTAACTTTTTTTCAAGTCTGTGCTTCTGAAGAAGGTTTGCCTTAATATAACTACAACATTGATATATTTTTAAGGGGCATTTTTGAAACTGTACTTTTAAA---AATAATTCTTACATTCTTTTGAAGttct-------------ttttttttttttgagacagag i calJac3.chr2 C 0 C 0 a score=56489.000000 s hg38.chr3_KI270935v1_alt 11178 44 + 197351 gcttgccctgtcacccaggctggagtgcagtggcattgatcttg s panTro4.chr3 635321 44 - 202329955 gcttgccctgtcacccaggctggagtgcaatgTTATTGATCTTG i panTro4.chr3 C 0 M 247 s ponAbe2.chr3 199664733 44 + 202140232 gctcactctgtcacccaggctggagtgcagtggcattgatcttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120774157 44 + 123690457 gctctctctgtcaccgaggctggagtgcaatggcattgatcttg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 36807 42 + 174439528 gcttgctgtctcgcccaggctgga-tgcagtggtg-cgatcttg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89544229 43 - 91010382 gctcgctttgtcgcccaggctggagtgcagtggcg-cgatcttg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184010 43 - 204313951 tctcactctgttgtccaggctggagtgcaatggtg-tgatctca i calJac3.chr2 C 0 C 0 a score=74140.000000 s hg38.chr3_KI270935v1_alt 11222 68 + 197351 gctcactgcaacctctgcatctggagttcaagcaattctcctgcctcagcctcctgagtagctgggac s ponAbe2.chr3 199664777 68 + 202140232 gctcactgcaacctctgcatctggagttcaagcgattctcctgcctcagcctccagagtagctgggac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120774201 68 + 123690457 gctcactgcaacctctgcatctggagttcaagcgattctcctgcctcagcctcctgagtagctgggac i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 36849 68 + 174439528 gctcactgcaacctccgtgtccggggttcaagcgattctcctgcctcagcctcctgagtagctgggat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89544272 68 - 91010382 gctcactgcaacctccacgtccggggttcaagccattctcctgcctcagccccctgagtagctgggac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184053 59 - 204313951 gctcactgcaacctctgtctccctggttcacgtgattctcctgcct---------gagttgttgggat i calJac3.chr2 C 0 C 0 e panTro4.chr3 635365 247 - 202329955 M a score=227646.000000 s hg38.chr3_KI270935v1_alt 11290 148 + 197351 tacaggcacctgccaccacgcccagctaattttttgtatttttaatagagatggggtttcaccgtgttagccaggatggtctcaatctcctgacctcatgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagcc s panTro4.chr3 635612 148 - 202329955 tacaggcacctgccaccacgcccagctaattttttatatttttagtagagacggggtttcaccgtgttagccaggatggtctcaatctcctgacctggtgatccacccacctcggcctccccacgtgctgggattacaggcgtgagcc i panTro4.chr3 M 247 C 0 s ponAbe2.chr3 199664845 148 + 202140232 gacagacacctgccaccatgcccagctaattttttgtatttttagtagagacagggtttcaccgtgtttgccaggatggtctcaaagtcctgacatcgtgatccgcccacctcggcctcccaaagtgctgggattagaggcatgagcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120774269 148 + 123690457 tacaggcacctgccaccatgcacagcaaattttttgtatttttagtggagacggggtttcactgtgttagccaggatggtctcgatctcctgacctcatgatctgcccgtgtcagcctcccaaagtgctgggattacaggtgtgagcc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 36917 148 + 174439528 cacaggcgcctgccactatgcccggctaaatttttgtatttttagtagagatggggtttcactgtgttagctaggatggtctcgatctcctgacctcattgtctgcctgcctcggtctcccaaagtgctgggattacaggcgtgagcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89544340 148 - 91010382 tacaggtgcccgccaccacgcccagctaattttttgtatttttagtagagatggggtttcaccgtgttagccaggatggtctcaatctcctgaccttgtgatctgcgcacttcagcctcccaaagtgataggattacaggcgtgagcc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 184112 147 - 204313951 tataggcgtccgccactatgcccgcccaa-tttttgtatttttagtagagctgggatttcaccatgttgatcaggcttgtcttgaactcctgacctcgtgatccatccgcctcggcgtcccaaagtgctgggattacaggtgtgagcc i calJac3.chr2 C 0 T 47777 a score=3950.000000 s hg38.chr3_KI270935v1_alt 11438 3 + 197351 -GGG s panTro4.chr3 635760 4 - 202329955 aGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199664993 4 + 202140232 aGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120774417 4 + 123690457 aAGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 37065 4 + 174439528 aggg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89544488 4 - 91010382 aGGG i chlSab2.chr4 C 0 C 0 e calJac3.chr2 184259 47777 - 204313951 T a score=2165656.000000 s hg38.chr3_KI270935v1_alt 11441 1435 + 197351 ggccaacatggtgaaactctatctctactaaaaatac-aaaattagccgggaatggtggtgtgcgcctgtaatcccagctactcgggaggctgaggcatgagaatcacttgaacctgggaggcagaggttgcagtgagctgagatagcgccactacagtccagcctgggggacag--tgagactccatctcaaaaaaaaaaaacaaaaaaa--gaatagaaTAACTCTTGtttaggtgttacaaaatccaggccagaccaatctaaactttaatctcatacccagttcctagatgagtcccttctccagctcaggttcggcctaagcctcagggttccttg-cttggtgggcaccacctgctc---------ccttccccgcctttgttcctc-------tttttcctctgctggctcctccggggttgggtgtgTTCAGAGGCAGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAGATA-TAGCTTTCTCTTGTAGGATATTTCatttatttatctattaaaaatatttatttagaacacaccattcatgtgccagaccctgttccaggaac-tggggagagggtgataaatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagacaaaaaagaaagaaaatacacgtgtccttagtacattagaaggttccaagtactgtagagaaaaataaagtaggttggactcggtggctcatgcctgtaatcccagcactttgcgaggctgaggtgggaggattacttgagctcaggaatttgagaccagcctgggc--aacatggcaaatcc-tgtctctaccaaaataaaaaaaaaaaaa-------------------------ttagctggatatggtggcgtgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccaggaggtgaaggttgcagtaagctgagatcgtgccattgcactccagcctgagtgacag--agccaaaccctgtctcaaaaacaaggaaa-----------gaaagaaaatgaaaaaaagaaagcagagatgggg-caagcagggg-agagggCT---------------GGTGCTGGGGTCACAGCGGAGGGGCTGGGGATGCACGGGAGGGGCTGGGGATGTGAGCTTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTCATGGCACAAGGGCCTCCTGGGGCTTGCGGTGGTTTTGCGCCAAGCTAATATCTTGTTCTTCCCAACAGACGGAGGCCCATTGAGGCTTCTGTGTCCTCCACGGGGACCAGCATTGGGCTAAACCTGCAGAC-ACCATTGCAAAGGGAA-----TTCAGGCAAACCCGCTGGTGAAAAATGATTCCAGCGTGGGG--ACAGAGGCTGACATTTCTCG-CGTGGGTGATTTAATGTTGGGCCTCAATTTTTCACTCCCCCCGTAAGAGTATGACATAGC-CACAACC s panTro4.chr3 635764 1440 - 202329955 ggccaacatggtgaaaccctatctctactaaaaatac-aaaattagctgggaatggtgatgtgcgcctgtaatcccagctactcgggaggctgaggcatgagaatcacttgaacctgggaggcagaggttgcagtgagctgagatagcgccactgcactccagcctgggggacag--tgagactccttctcaaaaaaaaaaaaaaaaaaaaaagaatagaaTAACTCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATTAGTCCCTTCTGCAGCTCAGGTTCGGCCTAAGCCTCAGGGTTCCTTA-CTTGGTGGGCACCACCTGCTC---------CCTTCCCCACCTTTGTTCCTC-------TTTTTCCTCTGCTGGCCCCTCCGGGGTTGGGTGTGTTCAGAGGCAGAGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGATATTTCatttatttatctgttaaaaatatttatttagaacacaccattcatgtgccagaccctgttccaggcac-tggggatagggtgataaatgagatcaacaaaaatacctgcccacattaagctcctgttctagggaagacaaaaaagaaagaaaatacacgtgtccttagtacattagaagattccaagtactgcagagaaaaataaagtaggctggactcagtggctcacgcctataatcccagcactttgggaggctgaggtgggaggattacttgagctcaggaatttgagaccagcctgggc--aacatggcaaatcc-tgtctctacaaaaaaaaaaaaaaaaaaa------------------------attagctgggtatggtggcatgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccaggaggtgaaggttgcagtaagctgagatcgtgccattgcactccagcctgagtgacag--agccagactctgtctcaaaaaaaaggaaa-----------ggaagaaaatgaaaaaaagaaagcagagatgggg-caagcagggggagagggCT---------------GGTGCTGGGGTCACAGCAGAGGGGCTGGGGATGCACGGGAGGGGCTGGGGATGTGAGCTTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTCATGGCACAAGGGCCCCCTGGGTCTTGCGGTGGTTTTGCGCCAAGCTAATATCTTGTTCTTTCCAACAGACGGAGGCCCATTGAGGCTTCTCTGTCCTCCACGGGGACCGGCATTGGGCTAAACCTGCAGAC-ACCATTGCAAAGGGAA-----TTCAGGCAAACCCGCTGGTGAAGAATGATTCCAGCTTGGGG--ACAGAGGCTGACATTTCTTG-CGTGGGTGATTTAATGTTGGGCCTCAATTTTTCATTCCCCCCGTAAGAGTATGACATAGC-CACAACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199664997 1422 + 202140232 ggccaacatggtgaaaccctatctctactaaaaatac-aaaattaaccgggaatggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcatgagaatcacttcaacctggaaggcagaggttgcagtgagctgagatagcgccactgcactccagcctgggggtcag--tgagactccatctcaaaaaaaaaaaaaaaaagaa----------taaGTCTTGTTTAGCTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATTAGTCCCTTCTCCAGCTCAGGTTCGGCCTAAGCCTCAGGGTTCCTTA-CTTGGTGGGCACCACCCGCTC---------ACTTCCCCACCTTTGTTCCTG-------TTTTTCCTCTGCTGGCTCCTCCGGGGTTGGGTGTGTTCAGAGGCGGAGACAGGCTAAAGGTCTTTGGCTGTTAGGTTCTGTTGATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGATATTTCatttatttatctattaaaaatatttatttagaacacaccattcatgtgccagaccctgttccaggcac-tggggatagggtgataaatgagatcaacaaaaatacctgtccacattaagctcctgttttagcgaagacaaaaaagaaagaaaatacacgtgtccttagtacattagaaggttccaagtactgtagagaaaaataaagtaggttggactcggtggctcacgcctgtaatcccagcactttggaaggctgaggtgggaggattacttgagctcagaaatatgagaccagcctgggc--aacatggcaaatcc-tgtctctaccaaaaaaaaaaaaaaaa---------------------------ttagctgggtatggtggcatgcacctatagtcccagccactggggaggctgaggagggagaattgcttcagcccaggtggtgaaggttgcagtaagccgagatcgtgccattgcactccagccagggtgacag--agccagaccctgtctcaaaaaaaacga---------------aagaacatgaaaaaaagaaagcagagatgggg-caagcaggag-agagggCT---------------GGTGCTGGGGTCACAGGGGAGGGGCTGGGGATGCACGGGAGGGGCTGGGGATGCAAGCTTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTCATGGTGCAAGGGCCCCCTGGGGCTTGCGGTGGTTTTGCACCAACCTAATATCTTGTTTTTCCCAACAGACGGAGGCCCATGGAGGCTTCTCTGTCCTCCACGGGGAACAGCACTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAA-----TTCAGGCAAACCCGCTGGTGAAGAATGATTCCAGCGTGGGG--ACAGAGGCTGACATTTCTTG-CGTGGGTGATTTAATGTTGGGCCTCAATTTTTCACTCCCGCCGTAAGAGTATGACATAGC-CACAACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120774421 1402 + 123690457 ggccaacagggtgaaactctatctctactaaaaatac-aaaattagccaggaatggtggtgtgcgcctgtaatcccagctactcgggaggctgaggcatgagaatcacttgatcccgggaggcagaggttgcagtgagctgagatagcgccactgcactcctgcctgggggacag--tgaggttccatctcaaaaaaaaTATAGAA---------------TAACTTTTGtttaggtgttacaaaatccaggccagacaaatctaaactttaatctcacacccagttcctagattagtcccttctccagctcaggttcggcctaagcctcagggttcctca-cttggtgggcaccacctgctc---------ccttccccacctttgttcctc-------tttttcctctgctggctcctccggggttgggtgtgttcagtggcggaaacaggctaaaggtctttggcttttaggttctgttgATGGGTGAGTTCCAGATACTAGCTTTCTCTTGTAGGGTATttcatttattcctc----aaaaata-----ttagaacacaccattcatgtgccagaccctgttccaggcac-tggggctagggtgataaatgagatcaacaaaaatacctgcccacattaatctcctgttctagggaagaccaaaaagaaagaaaatacacgtgtccttagtacattagaagtttgcaagtagtgtagagaaaaataaagtaggttggactcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggaggattacttgagctcaggaatttg-------------------------------tgtctctacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattagctgggtatggtggcatgcacctgtagtcccagccactggggaggctgaggagggagaattgcttcagccctggaggtgaaggttgcagtaagccgagatcgtgccattgcactccagcctgggtgacag--agccagaccctgtctcaaaaaaaaaaaaaaaaaccaaaaggaaagaaagatgaaaaaacaaagcagagatgggg--aagCAGAGG-AGAGGGCT---------------GGTGCTGGGGTCACAG--------------------GGGAGGGGCTGGGGATGCAAGCTTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCTCACAGGGCAAGGGCCACCTGGGGCTTGCGGTGGTTTTACACCAAGCTAATATCTTGTTCTTCCCAACAGACGGAGGCCCATTGAGGCTTCTCTGTCCTCCATGAGGAATAGCATTGGCCTAAACCTGCAGAC-AGCATTGCAAAGAGAA-----GTCAGGCAAACCCGCTGATGAAGAATGATTCCAGTGTGCTG--ACGGAGGCTGACATTTCTTGCCATGGGTGATTTAATGTTGGGCCTCAATTTTTCACTCCCCCCGTAAGAGTATGACATAGC-CACAACC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 37069 1441 + 174439528 ggccaatgtagtgaaacctcatctctactaaaaatac-aaaattagtcgggaatggtggtgtgcgcctgtaatcccagctacccgggaggctgaggcatgagaatcagttggacccgggaggcagaggttgcagtgagctgagatcacgccactgcactccagccttggggacag--tgagactccatct----caaaaaaaaaaaaatga--taatggaaTAACCCTTGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAAC-TTAATCTCACACCCAGTTCCTAGATTAGTCTCTTCTCCAGCTCAGGTTTGGCCTAAGCCTCAGGGGTCCTTA-CTTGGTGGGCGCCACCTGCTCCcttccccaccttccccaccTTTGTTCCTG-------TTTTTCCTCTGCTGGCTCCTCCTGGGTTGGGTGTGTTCAGAGGCGGCGACAGGCTAAAGGTCTTTGGCTTTTAGGTTCTGTTGATGGGTGAGTTCCGAATACTAGCTTTCTCTTGTAGGATATTTCATTTagttatctattaaaaatatttatttggaacaCACCAttcatgtgccagacactgttccaggcac-tggggatagGGTAATAAATGAGATCAACAGAAACACCTGCCCACGTTAAGCTCCCGTTCTAGGGAAGacgaaaaagagagaaaatacatgtgtCCTTAGTACGTTAGAAGGTTCCAAGtactgtaaagaaaaataaagcaggctggactcggcggctcatgcctgtaatcccggcactttgggagac--aggtgggaggattacttgagctcaggaatttgagaccagcctgggt--aacatggcaaatcT-TGtctttaccaaaag-aaaaaaaaaa---------------------------ttagctgggtggg-------------gtagtcccagccactggggaggctgaggagggagaattgcttcagccctggaggtgaaggttgcagtaagccgagatcgtgccattgcactccagcctgggtgacaa--agccagaccctgtctc--aaaaaaaaa-------------taaagaaaatgaaaaaaagaaagcagagatgggg-caagcagggg-agagggctggggacgcaggggagggtgctggggatgcaggggaggggttgggaacacgggggagaggctggggaCGCAAGCTTTCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCACACAAGGCGTGGGCCCCCTGGGGCTTGTGATGGTTTTGTGCCAAGCTAATATCTTGTTCTTCCCAACAGACAGAGGCCCACTGAGGCTTCTCTCTCCTCCACGGGTAACAAGATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTCAGGCGAACCCGCTGGTGAAGAATGATTCCaatgtggggacacagaggccgACATTTCTTGCCATGGGTGATTTAATGTTGGGCCTCAATTTTTCACTCTC-CTGTAAGAGTATGACACAGCTCGCAGCT i papAnu2.chr6 C 0 I 1005 s chlSab2.chr4 89544492 1445 - 91010382 ggccaacatggtgaaaccccatctctactaaaaatac-aaaattagctgggaatggtggtgtgcacctgtaat-ccagccactcgggaggctgaggcatgagaatcagttggacccgggaggcagaggttgcagtgagctgagatcacgccactgcactccagccttggggacag--tgagactccatctcaaacaaaaaaaaagaaaTGA--TAATGGAATAACCCTTGtttaggtgttacaaaatccaggccagacaaatctaaac-ttaatctcacacccagttcctagattagtcctttctccagctcaggtttggcctaagcctcaggggtcctta-cttggtgggcgccacctgctc---------ccttccccacctttgttcctg-------tttttcttctgctggctcctcccgggttgggtgtgttcagaggcggagacaggctaaaggtctttggcttttaggttctgttgATGGGTGAGTTCCAAATACTAGCTTTCTCTTGTAGGATATTTCATTTAGttatctatttaaaatatttatttagaacacaccattcatgtgccagacactgttccaggtgcttagggatagggtgatagatgagatcaacaaaaatacctgcccacgttaagctcctgttctagggaagacaaaaa----ataaaatacacgtgtccttagtacattagaaggttccaagtactgtaaagaaaaataaagcaggctggactcagtggctcatgcctgtaatcccggcactttgggagac--aggtgggaggattacttgagctcaggaatttgagaccagcctgggt--aacatggcaaatcc-tgtctctaccaaaagaaaaaaaaaaa---------------------------ttagctgggtgtggtggcg-gcatctgtagtcccagccactggggaggctgaggagggagaattgcttcagcccgggaggtgaaggttgcagtaagccgagatcgtgccattgcactccagcctgggtgatag--agccagaccctgtctcagaaaaaaaaa-------------gaaagaaaatgaaaaaaagaaagcagagatgggg-caagcagggg-agagggCTGGGGACACAGGGGAGGGTGCTGGGGACACAGGGGAGGGGTTGAGAACACGGGGGAGAGGCTGGGGACGCAAGCTTGCCTGAGTTCCCACAG---TTCTCTGCCCCTCTCCTGTCACACAAGGCGT--GCCCCCTGGGGCTTGTGGTGGTTTTGCGCCAAGCTAATATCTTGTTCTTCCCAACAGACAGAGGCCCACTGAGGCTTCTCTCTCCTCCACAGGGAACAGCATTGGCCTAAACCTGCAGAC-ACCATTGCAAAGGGAAGTCAGCTCAGGCGAACCCGCTGGTGAAGAATGATTCCAATGTGGGGACACAGAGGCCGACATTTCTTGCCATGGGTGATTTAATGTTGGCCCTCAATTTTTCACTCTC-CTGTAAGAGTATGACACAGCTCACAGCT i chlSab2.chr4 C 0 I 6 s calJac3.chr5 41951593 1360 + 159171411 gaccaacatggtgaaaccccgtctctaatgaaaatacaaaaatgagctgggcatggtgacaagcgcctataac-ctagctactcaggaggctgaggcaggagaattacctgaacctgaaaggtggaggttgcagtgagctgagattgtgccattgtactccagcctgggccacagaccaagactctgtctcaaaaaaaacaaaaacaaaaa-taaaTGGAATAACTGATGTTTAGGTGTTACAAAATCCAGGCCAGACAAATCTAAACTTTAATCTCACACCCAGTTCCTAGATGAGTCTCTTCTCCAGCTCCAGTTCAGCCTAAGCCTTGGGGGTCCTTAGCTGGGCGGGCACCACCTGTTC---------CCTTCCCCACCTTTGTTCCTGTTTTTTTTTTTTCCTCTGCTGGCTCCTCTGGGGTTGGCTGCGTTCAGAGGTAGGGACAGGCTAAAGGTCTCTGGCTTTTTGGTTCTGTTGATGGGTGAGCTCCCAATACTAGCTTTCTCTTGTAGGATATTTCatttatttatttgttaaaaatatttacttagaacacatcattcacatgccagccactgttctaggcac-tggggatagggtgataaatgagataaacaaaaatacctgctcatgtaaagctcctattctagggaagacaaaaaag--agaaaatacatgtgtacttagtacattagaaggttccaagtactgtaaagaaaaataaagcaggccagactcagtgactcacatctgtaatcccagcactttgagag--------------------------------ttcgagaccagcctggtttggtcacgacaaaaccaggtctctac--------aaaaaaaaa---------------------------ttagttgggtgtgggggcatgcacctgtggtcccagccactggggaggcttaggtgggaggattgcttgagcctgggaggcggagatggcagtaagccaagattgtaccattgcactccagcctgggtgacagccagacagaccctgtctggaaaaaaaaaa---------------------------aaaaaaaagcagagatgggggtaagtgggga-ag-----t-------------------------------------------------------ggggctggggatgCAAGCGTCCCTGAGCTCCCATGGTTCTTCTCTGCCCCTCTCCTGTCTCATGGGGCACAGGTCCCCTGGGGCTTGTGGTTGTTTTACGCCAATCTAATATCCTTTTCTTCCCAACAGTTGGAGGCCAACTGAGGCTTCTTTGTCCTCCACGGGGAACAGCACTGGCCTAATCCTGCGGACAACCATTGCAAAGGGCAGTCAGCTCCAGTAAACCTGCTGATGAAGAATGATCCCAGAGTGGGGACACAGAGGCTGACATTTCTTGCTGTAGGTGATTTAATGATGGGCCTCAATATTTCACTCCTCTTGTAAGAGTATGACACATC-CACATCC i calJac3.chr5 n 47777 C 0 a score=1771923.000000 s hg38.chr3_KI270935v1_alt 12876 1112 + 197351 TTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCGTCCCATAGGTGTTGCTCGtggctgggtgacttgcttctgccaacgagattttcacagacacggcacaagcagaagcctggaatgtgtgggcactgccaggcctgccgtc-tAAGGCTCTTGATTTTCCCCATGAGATGCACGTGCCCCAGGGAACGGCGGCTCTGGCTGTGGGATGAGAGGCGTGTGGAGCAGTCATGGTTCCCATCCTTAGCCTGGAGTCAAGGCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACGGGTGCAGGAGTGAAGAGCAAATGCTAACTGTCCATGGAATTGACTTTCAAAGGGGCGTGTCATGT-----GCCTCATCCCAGCAACAGGGAAGGCATTTCTCTATCAGTCAGTTGGTAAATGATTATTGACAAACAATgtgctgggaaggtggagtgatttgagtagatttggcctctattctcatggagcttcctttctagaggggaaggcagatgatggatggataaatataaatgattctaataggttggtgcagcagt---------------cattaaaagtaatggc-gaaaaaaaaaacaaaagaaacggggaGGAGCCGTTGCTGCCGTTcattaatagtaatggcaaaacccgcgatgacttgtgcgccaacctaaCCCAGTAACCACGGGTGTGC-AAATGTGGCAATGGGCAAGTTCCGAGTGCTAGGAGAGCATCTAGCTTCCCGGAGTCAGGAGACGGGGGTTGGCAACCTAACCAAGGTTAAGTCCAAGTGAGGGGGGTGGGCagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgatag--------ggtgtttgtctggcacagagaagagcctgtgcaaaagctggtggggtgagaggacaccgtgtattcatccacctgaggggcgaccagcaggctggagctcagtgggttgagaggaggatgCAGAGCCCgggaaaggcaccctaggcagagggcacagaagcg-caaaggcctggagtgaggcctgagcctgtgtggtttgaggaacggacagaggcctgtccgtcaggaagggaacggcaccggggagagaccttaggc s panTro4.chr3 637204 1111 - 202329955 TTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCATCCCATAGGTGTTGCTCGtggctgggtgacttgcttctgccaacgagattttcacagacacggcacaagcagaagcctggaatgtgtgggcactgccaggcctgccctc-tAAGGCTCTTGATTTTCCCCATGAGATGCACGTGCCCCAGGGAACGGCGGCTCTGGCTGTGGGATGAGAGGTGTGTGGAACAGGCATGGTTCCCATCCTCAGCCTGGAGTCAAAGCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACGGGTGCAGGAGTGAAGAGCAAATGCTAACTGTCCATGGAATTGACTTTCAAAGGGGCGTGTCATGT-----GCCTCATCCCAGCAACAGGGAAGGCATTTCTCTATCAGTCAGTTGGTAAATGATTATTGACAAACAATgtgctgggaaggtggagtgatttgagtagatttggcctctattctcatggagcttcctttctagaggggaaggcagatgatggatggataaatataaatgattctaataggttggtgcagcagt---------------cattaaaagtaatggc-aaaaaaaaaaaagaaagaaacggggaGGAGCCGTTGCtgcagttcatgaatagtaatggcaaaacccgcgatgacttgtgcgccaacctaaCCCAGTAACCAGGGGTGTGC-AAATGTGGCGATGGGCAAGTTCCGAGTGCTAGGAGAGCATCTAGCTTCCCGGAGTCAGGAGACGGGGGTTGGCAACCTAACCAAGGTTAAGTCCAagggagggggttgggcagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgatag--------ggtgtttgtctggcacagagaagagcctgtgcaaaagctggtggggtgagaggacaccgtgtgttcatccacctgaggggcgaccagcaggctggagctcagcgggttgagaggaggatgcagagcccgggaaaggcaccctaggcagagggcacagaaggg-caaaggcctggagtgaggcctgagcc-gtgtggtttgaggaacggacagaggcctgtccgtcaggaagggaacggcacaggggagagaccttaggc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199666419 1117 + 202140232 TTGCCAGGACCCGAGGGAGGGTGGATGGACTTATCCATCCCATAGGTGATGCTCGTGGTTGGGTGACTTTCTTCTGCCAACGAGGTTTTCACAGACATGGCACAAGCAGAAGCCTGGAATGTGTGGGCACTGCCAGGCCTACCCTC-TGAGGCTCTTGATTTTCCCCATGAGATGTGCATGCCCCAGGGAATGGCGGCTCTGGCTGCATGATGAGAGGCGTGTGGAGCAGACATGGTTCCCATCCTAAGCCTGGAGTCAAGGTCAGACTAGATCAGCCTAAGCGCAGCCACGCCACGGGTGCAGGAGTGAAGAGCAAATGCTAACTGTCTATGGAATTGACTTTCAAAGGGGCGTGTCATGT-----GCCTCATGCCAGCAACAGAGAAGGCATTTCTCTATCAGTCAGTTGGTAAATGATTATTGACAAACCATGTGCTGGGAAGGTGGAGAGATTTGAGTAGATTTGgcctctattctcatgacgcttcctttctagaggggagggcagatgatggat-aataactataaatgattctaataggttggtgcagcagt---------------cattaaaagtaatggcaaaaaaaaaaaaaaaaagaaacggggaGGAGCCGATGCTGCAGTTcattaatagtaatggcaaaaaccgcgatgacttgtgcaccaagctaaCACAGTAACCACGGCTGTGCAAAATGTGGCGATGGGCGAGTTCCGAGTGCTAGGAGAGCATCTAGCTTCCCGGAGTCAGGAGACGGGGGTTGGCAACCTAACCAAGGTGAAGTCCAAGTGAGGGGTGTGGGCAGGGAGCGATATTTCAGTGGAGACTCCAAGGATGAATGGTATTCAG-AGAGCAAACCCCGATAG----AGAAGGTGTGTGTCTGTCACAGAGAAGAGGCTGTGCAAAAGCTGGCGGGGCGAGAGGACACCGTGTGTTCATCcacctgaggggcgaccagcaggctggagctcagcgggttgacaggaggatgcagagcctgggaaaggcaccccaggcagagggcacagcaggg-caaaggcctggagtcaggcctgagcctgtgtgttttgaggaacagacagaggcctgtccggcaggaagggaacggcacaggggagagaccttaggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120775823 1116 + 123690457 TTGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCATCCCATAGGTGTTGCTCGtggctgggtgacttgcttctgccagtgagattttcacagacacggcacaagcagaagcctggaatgtgtgggcactgccaggcctgccctc-tGAGGCTCTTGATTTTCCCCACGAGATGCGCGTGCCCCAGGGAACGGCGGCTCTGGCTGCGGGATGAGAGGCGTGTGGAGCAGGCATGGTTCCCATCCTTAGCCTGCAGTCAAGCCCAGACTAGATGAGCCTAAGCCCAGCCACGCCACGGGTGCAGGAGTGAAGAGCAAATGCTAACTGTCCATGGAATTGACTTTCAAAGGGGCGTGTCATGT-----GCCTCATCCCAGCAACAGTGAAGGCATTTCCCTATCAGTCAGTTGGTAAATGATTATTGACAAACAATGTGCTGGGAAGGTGGACTGATTTGAGTAGATTTGGCCTCTATTCTCATGGGGCTTCCTTTCTAGAGGGGCAGGCAGATGATGGATGGGTAAATATAAATGATGCTAATAGGTTGGTGCAGCAGT---------------CATTAAAAGGAATGGC--AAAAAAAGAAAAGAAGAAATGGGGAGGAGCCGCTGCtgcagttcattaatagtaatggcaaaaaccgcgatgacttgtgccccaacctaaCACAGTAACCACGGGTGTGCAAAATGTGGCAATTGGGAAGTTCCGAGTGCTAGGAGAGCATCTAGCTTCCCGGCGTCAGGACACGGGGGTTGGCAACCTAACCAAGGTTAAGTCCAAGTGAGGAGGGTGGGCagggagcgatatttcagtggagactccaaggatgaatggtatttag-agatgaaaccccgatag----agagggtgtgtgtctggcacagagaagagcctgtgcaaaagccggcggggcgagaggacaccgtgtgttcctccacctgaggggcgaccagcaggctggagctcagcgggttgagaggaggatgcagagcccgggaaaggcaccctaggcagagggcacagcaggg-caaaggcctggagtcgggcccgagcctgtgtggtttgaggaacggacagaggcctgtctggcaggaagggaacggcacaggggagagacctgaggc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 39515 1113 + 174439528 TAGCCAGGGCCCGAGGGAGGGTGGATGGACTTATCCATCCCACAGGTGTTGCTCGTGGCTGGGTGACTTGCTTCTGCCAACGAGATTTGCACAGACACGGCACAAGCAGAAGCCTGGAATGTGCGGGCACTGCCAGGCCTGCCCTCTTAAGGCTCTTGATTTTCCCCATGAGATGCGCGTGCCCCGGGGAACAGCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCAGCCTGGAGTCAAGCCCAGACTAGATCAGCCTAAGCCCAGCCACGCCACAGGTGCAGGAGTGAAGAGCAAACGCTAACTGTCCATGACAGTGGCTTTCACAGGGGCGTGTCGTGT-----GCCTCATCCCAGCAACGGTGGCGGCATTTCTCTGTCAGTCAGTCGGGAAATGATGATTGACAAGCAGTGTGCTGGGAAGCTAGAGTGATTTGAGTAGATTCTGCCTCTCTTCTCACGGAGCTTCCTTTCTAGAGGGGAAGGCagatgatggatgaataaatataaGTGATTCTAATAGGTTGGGGCAGcagt---------------cattaaaagtaatggc-------aaaaaaaaaaaaagtgggaaggaGCTGGTGCTGCAGTTCGTTAATAGTAATGGCAAAAATCTCGATGActtctgcaccaacctaacaCAGTAATCACGGGTGTGCAAAATGTGGCAATGGGGGAGTTCCAAGTGCTAGGATGGCATCTGGCTTCCTGGAGTCTGGAGAT--GGGTTGGCAACCTAACCAAGGTTAAGTCCCAGTGAGGGG-GTGGGCAGGGAGCGATATTTCAGTGGAGACTCCAAGGATGAATGGTATTTAG-AGAGTAAACCCCGGTAGTGAGAGGGGGAGTGTGTCTGGCACAGAGAAGAGCCTGTGCGAAGGCTCTTGGTGTGAGAGGACACTGTGTGTTCATCCACCTGAGGGGCGACCAGCATGCTGGAGCTGAGTGAGTTAAGAGGAGGATGCGGAGCCCGGGAAAGGCAccccaggcagagggcacagcaggG-GAAAGGTCCAGAGTCAGGCCTGAGCCTCTGTGGTTTGGGGAACTGGCAGAGGCCTGTCCGGGAGGAAGGGAATGACAGAGAGAAGAGACCTTAGGC i papAnu2.chr6 I 1005 I 122 s chlSab2.chr4 89545943 1113 - 91010382 TAGCCAGGGCCCGAGGGAGGGTGAACGGACTTATCCATCCCACAGGTGTTGCTTGtggctgggtgacttgcttctgccaacgagatttgcacagacacggcacaagcagaagccttgaatgtgcgggcactgccaggcctgccctc-tAAGGCTCTTGATTTTCCCCATGAGATGCGCGTGCCCCAGGGAACAGCGGCTCTGGCTGCAGGATGAGAGGCGTGTGGAGCACACATGGTTCCCACGCTCAGCCTGGAGTCAAGCCCAGACTAGATCAGCCTAAGCCCAGCCACACCACGGGTGCAGGAGTGAAGAGCAAATGCTAACTGTCCATGACAGTGGCTTTCAAAGGGGCATGTCAGGT-----GCCTTATCCCAGCAACGGTGACGGCATTTCTCTAtcagtcagtcagtaaatgattattgacaagcagtgtgctgggaagctggagtgatttgagtagatttggcctctgttctcatggagcttcctttctagaggggaaggcagatgatggatgaataaatataaatgattctaataggttggggcagcagt---------------cattaaaagtaatggc------aaaaaaaaaaaaaagtgggaaggagCTGGTGCTGCAGTTcgttaatagtaatggcaaaaaccgtgatgacttctgcaccaacctaaCACAGTAATCACGGGTGTGCAAAATGTGGCAATGGGGGAGTTCCAAGTGCTAGGATGGCATCTGGCTTCCTGGTGTCAGGAGAT--GGGTTGGCAACCTAACCAAGGTTAAGTCCCAGTGCGGGG-GTGGGcagggagcgatatttcagtggagactccaaggatgaatggtatttag-agagtaaaccccgatagtgagagggggagtgtgtctggcacggagaagagcctatgccaaggccggtggggcgggaggacaccatgtgttcatccacctgaggggcaaccagcaggctggagctgagtgagttaagaggaggatgtggagctggggaaaggcaccccaggcagagggcacagcaggg-gaaaggtccggagtcaggcctgagcctctgtggtttggggaactggcagaggcctgtccaggaggaagggaatggcagaggggagagaccttaggc i chlSab2.chr4 I 6 C 0 s calJac3.chr5 41952953 1107 + 159171411 TTGCCAGGGCCTGAGGGAGGCTGGAGAGACTTATCCATCCCATAGGTGCTGCTTGTGCCTGGGTGA-------------------TTTTAATAGACACTGCACAAGCAGAAGCCTGAAATGTGTTGGCACTGCCAGGCCTGCCCTC-TAATGCTCTTGATTTTTCCCATGAGATGAGTGTGCCCCAGGGAACGTCGGCTCCAACTGCAGGTTGAGAGGCATGTGGAGCACGCATGGTT-CCACCCTCAGCCTGGAGTCAAGTCCAGACTAGATCAGCCTCAGCCCAGCCAAGCCCCGGGTGCAGGAGTGAAAAGCAAATGCTAACGGCCCATGACACTGACTTTCAAAGGGGAGTGTCCTGTCACGGGCTTCCTCCCAGCAACAATGAAGGTGTTTCTCTATCAGTCAGTCGGTAAATAATTACCCACAAATAATGTGCTAGGAAGGTGGAGCGATTTGAGTCgatttggtccctatactcgtggagcttgctttctagaggggaagacagatgatggatgaataaatataaaTGATTCTAttaggttggtgcagcagtaattctggtttttgccgttaaaagtaatggc------------aataaAAAGCGGGTAGGAGCTGGTGCTGCAGTTcattaaaagtaacagcaaaaactgcggtaacttccgcaccaacctaaTAGAATAATTACGAGCGTGCAAAACGTTGCAATGGGCAAGTTCCAAGTGCTGGGATGGCATCTAGCTTCCTGGAGTCAGGAGACAGGGTTTGGCAACCTAGCCAAGGTTAAGTCCAAGTGATGGGGGCGGGCagggagcgatatttcagtggagactccaaggatgactggtaattagaaaagtaaacccagatgtgaaagggggaagcatttcaggcaaagagaagagtgtgtgcaaaggcctatggg--aggaggacattgtgtatctatcaaccttcggggcaaccagcaggctggagctgagcacgttgagaggaggacg-ggagccggggaaaggcaacccaggcaga-ggcatagcagggacaaaagcctggagtcaggcctgaacctgtgtggtttgaggaaccgacagaggcctgtccgacaggaaagtaacagcagaggggaga-ccattaggc i calJac3.chr5 C 0 C 0 a score=996.000000 s hg38.chr3_KI270935v1_alt 13988 5 + 197351 cacag s panTro4.chr3 638315 5 - 202329955 cacag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199667536 5 + 202140232 cagag i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 41954060 0 + 159171411 C e chlSab2.chr4 89547056 0 - 91010382 C e papAnu2.chr6 40628 122 + 174439528 I e nomLeu3.chr11 120776939 0 + 123690457 C a score=80977.000000 s hg38.chr3_KI270935v1_alt 13993 53 + 197351 cagagggcagggcagagggcagggccgtgctgggcactgtgggctgtggatgg s panTro4.chr3 638320 53 - 202329955 cagagggcagggcagagggcagggccgtgctgggcactgtgggctgtggatgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199667541 53 + 202140232 ctgagggcagggcagagggcagggctgtgctgggcactgtgggctatggatgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120776939 46 + 123690457 -------cagagcagagggcagggctgtgctgggcactgtgggcTGTGGATGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 40750 53 + 174439528 CATAGGCCAGGGTAGAGGGCAGGGCcgtgctgggcactgtgggctGTGGATGG i papAnu2.chr6 I 122 I 130 s chlSab2.chr4 89547056 46 - 91010382 -------cagagtagacggcagggccgtgccgggcactgtgggctctggatgg i chlSab2.chr4 C 0 I 1 s calJac3.chr5 41954060 44 + 159171411 -------cagggcagagggcagggccatgctgggcactgtgggctgtggat-- i calJac3.chr5 C 0 C 0 a score=33515.000000 s hg38.chr3_KI270935v1_alt 14046 26 + 197351 tgctggcatttaagaggggagaccaT s panTro4.chr3 638373 26 - 202329955 tgctggcatttaagaggggagaccaT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199667594 26 + 202140232 tgctggcatttaagaggggagaccat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120776985 26 + 123690457 TGCTGGCATTTCAGAGGGGAGACCAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 40933 26 + 174439528 TGCTGGCATGTAAGAGGGGAGTCCAC i papAnu2.chr6 I 130 C 0 s chlSab2.chr4 89547103 26 - 91010382 tgctggcatttaAGAGGGGAGACCAT i chlSab2.chr4 I 1 I 2373 e calJac3.chr5 41954104 0 + 159171411 C a score=362810.000000 s hg38.chr3_KI270935v1_alt 14072 241 + 197351 AGACCAGGGCAGAGGGCAGGGCCGTGCTGGGCACTTCGGGCTGTGGATGGGAGCTGGCATTTATGCTCAGGTGATGGGAATGTGTTAAAAGATTTTAAGGAGGGGAGTAACAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGCAGAGAGAAATAAGATCATGTCTACAGCTGTGTGAT--GATTTTATTGAAAAAC s panTro4.chr3 638399 241 - 202329955 AGACCAGGGCAGAGGGCAGGGCTGTGCTGGGCACTTTGGGCTGTGGATGGGAGCTGACATTTATGCTCAGGTGATGGGAATGTGTTAAAAGATTTTAAGGAGGGGAGTAACAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGCAGAGAGAAATAAGATCGTGTCTACAGCTGTGTGAT--GATTTTATTGAAAAAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199667620 241 + 202140232 agaccagggcagagggcagggccatgCTGGGCACTTCAGGCTGTGGATGGGAGCTGGCATTTATGCTCAGGTGATGGGAATATGTGAAAAGATTTTAAGGAGGGGAGTAAGAGTTGGGATGAATGTGTATTCTGGGAATCTCAACAAAGCAAATTCATAGTTGGAATTTTCATAAGATTTCTGCAAAGGCAGAGAGAAATAAGATCGTGACTACAGCTGTGTGat--tattttatttaaaaat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777011 241 + 123690457 AGACCAGGGCAGAGGGCAGGGCCGTGCCGGGCACTTTGGGCTGTGGATGGGAGCTGGCATTTATGCTCAGGTGATGGGAATATGTTAAAAGATTTTAAGGAGGGGAATAGCAGTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCATAAGACTTCTGCACAGGGAGAGAGAAATAAGATCGCGTCTACAGCTGTGTGAT--GATTTTATGTAAAAAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 40959 240 + 174439528 AGACCATGGCAGAGGGCAGGGCCATCCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTCGGGTGATGGGAACATGTTAAAAGATTTTAAGGAGAGGAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCGCGTCTACGGCTGTGTgtt--gattatattaaaaat- i papAnu2.chr6 C 0 I 328 s chlSab2.chr4 89549502 240 - 91010382 AGACCAGGGCAGAGGGCAGGGCCATCCTGGACACCTTGGGCTGTGAATGGGAGCTGGCATTTATGCTCGAGTGATAGGAACATGTTAAAAGATTTTAAGGAGGGGAGTAACATTTGGGATTAATGTGTATTCTGGGAATCTCAACAAAGTAAATTCATAGTTTGAATTTTCACAAGACTTCTGTACAGGCAGAGAGAAATAAGATCGCGTCTACGGCTGTGTGTT--GATTATATTAAAAAT- i chlSab2.chr4 I 2373 C 0 s calJac3.chr5 41954104 194 + 159171411 ------------------------------------------------gggagctggcatttatgctccggtgagggggacatgttagaagcttttaaggagggcagtaacatTTGGGGATAATATGTATTCCGGGAATGCCAACAAAGTGAATTCATAGTTTGGATGTTCCTAAGACTTCTGCACAGGCACAGAGAAATAAGATCATTTCTACAGCTGTGAGATAAGATTATATTAAAAAT- i calJac3.chr5 C 0 C 0 a score=627928.000000 s hg38.chr3_KI270935v1_alt 14313 449 + 197351 ATTACTAAGTTTTTAAACGTGATTTCAAATGGTGTGTTTCTGTTTCACCTT-GGACATAAGTAGATTGCAAGGCTAATGGAAAGTAGAAAAGTTAATTCA------TGAACATAAAAGAGATATCAATTTGAAAACAAAACGTTTATTCATTTACTTCCGCTGCAGATTTCTTGACTGCTGAATTTCATGAGAAGGGATTGTTCAGGGAGGGACATGGGGCTGAAGACCTGGAGAGGAGGTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGATGGAGCCTTGGGGAGGAGCAGGTGCTGCCTTTTAAGTCTATGAGAGTCGTTGAGCTGGAGGTCCAGGGAGGAGCCAGTGCTCCCACTGATGTCTTA-------GGttgtggagctgaagacaatgaaggagccagtgtggctgt---tctgtgagactcgtggagctggagatccaggtggg----agaggtg s panTro4.chr3 638640 449 - 202329955 ATTACTAAGTTTTTAAACGTGATTTCAAATGGTGTGTTTCTGTTTCACATT-GGACATAAGTAGATTGCAAGGCTAATGGAAAGTAGAAAAGTTAACTCA------TGAACATAAAAGAGATATCAATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGATTTCTTGACTGCTGAATTTCATGAGAAGGGATTGTTCAGGGAGGGACGTGGGGCTGAAGACCTGGAGAGGAGGTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGAAGATGGAGCCTTGGGGAGGAGCAGGTGCTGCCTTTTAAGTCTATGAGAGTCGTTGAGCTGGAGGTCCAGGGAGGAGCCGGTGCTCCCACTGATGTCTTA-------GGttgtggagctgaagacaacgaaggagccagtgtggctgt---tctgtgagactcgtggagctggagatccaggtggg----agaggtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199667861 448 + 202140232 attaCTAAGATTTAAAACGTGATTTCAAATGGTGTGTTTCTGTTTCACATT-GGACATAAGTAGATTGCAAGGCTAATGGAAAGTAGAAAAGTTAACTCC------TGAACATAAAAGAGATATGGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGATTTCTTGACTGCTGAATTTCATGAGAAGGGATTGTTCAGGGAGGGTCGTGGGGCTGAAGACCTGGAGAGGAGCTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGATGGAGCCTTGGGGAGGAGCAGGTGCTG-CTTTTAAGTCTATGAGAGTCATTGAGGTGGACGTCCAGGAAGGAGCCGGTGCTCCCACTGATGTCTTA-------GGttgtggagctgaagacaatgaaggagccagtgtggctgt---tctgtgagagtcgtggagctggagatccaggtggg----agaggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777252 446 + 123690457 ACTACTAAGTTTTTAAACGTGATTTCAAATGGTGCGTTTCTGTTTCACATT-GGGCATAAGTAGATTGCAAGGCTAATGGAAAATAGAAAAGTTAACTGA------TGAACATAAAAGAGATACCGATTTGAAAACAAAACATTTATTCATTTACTTCAGCTGCAGTTTTGTTGACTGCTGAATTTCATGAGAAGGGATTGTTCCGGGAGGGTCGTGGGGCTGAAGACCTGGAGAGGAGCTGGTGCTACCGCTGTTCAAATCTGAGGGTGGTGGAGATGGGGCCTTGGGGAGCAACAGGTGCTGCCCTTTAAGTC--TGAGAGTCATTGAGCTGGACGTCCAGGGAGGAGCCGGTGCTGCCGCTGATGTCTTA-------GGTTGAGGAGCTGAAGACAATGAAGGAGCCAGTGTGGCTGT---TGTGTGAGGGTCGTGGAGCTGGAGAT-CAGGTGGG----AGAGGTG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 41527 454 + 174439528 atttctaagtttttaaacATCATTTCAACTGGTGTGTTTCTGTCTCACATT-GGACATAAGTAGATTGCAAGgttaatggaaaatagaaaagttaaCTCA------TGAACATAAAAGAGATACcgatttgaaaacaaaacatttattcatttacttctgctgCAGTTTTCTTGACTGCTGAATTTCGTGAGAAGGGATTGTTCAGGGAGGGTTGTGGGGCTGAAGACCCGGACAAGAGCTGGTGCTACTGCTATTCAAATCTGAGGTTGGTGGAGCTGGAGCCTTGGGGAGGAGCCGACGCTGCCTTTTAAGTC--TGAGAGTGGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTTTTA-------GGTTGTGGAGCTGAAGACAGTGAAGGAgccagtgtggctattcctctgtgagggtcgtggagctggagacGCATGGAGGAGCCGgagttg i papAnu2.chr6 I 328 I 4 s chlSab2.chr4 89549742 444 - 91010382 ATTTCTAAGTTTTTAAACGTCATTTCAACTGGTGTGTT--TGTCTCACATT-GGACATAAGTAGATTACAAGGTTAATGGAAAGTGGAAAAGTTAAGTCA------TGAACATAAAAGATACATCGATTTGAAAACAAAACATTTATTCATTTACTTCCGCTGCAGTTTTCTTGACTGCTGAATTTCGTGAGAAGGGATTGTTCAGGGAGGGttgtggggctgaagacccgggcaggagctggtgctaccgctgttcaaatctgag---ggtggagctggagccttggggaggagCCGACGCTGCCTTTTAAGTC--TAAGAGTCGTTGAGCTGGAGGTCCACGGAGGAGCTGGTGCTGCCACTGATGTCTTA-------GGTTGTGGAGCTGAAGACAGTGAAGGAGCTGGTGTGGCTGTTCCTCTGTGAGGGTCGTGGagctggagatccaggggg-----agaggtg i chlSab2.chr4 C 0 I 1584 s calJac3.chr5 41954298 404 + 159171411 ATTGCTAAGTTTTTAAAGGTCATTTCGAATGGTGGATTTCTATCTTACATTAGGACATAGGTAGGTTGCAAGGTTGACAGCAAGTAGAAAAGTTTCCTGACTCGTGTGAACATAAAAGAAACATCGATTTGAAAGCAAAACATTTATTCATTTACTTCCTCTGCAGTTTTCTTGACTGCTGAATTTCATGAGAAGGGATT----------GGTAATGAGG--------------------------TGCTGTCTTTCAAGTATGAGAGTTGTTGAGCTGGAGGTGCAAGGAAG------TGCTGCTGTtctaggg--ggagggttgtcgagctggagacccagggaggtgcag----------tgttgttctagttcgagggtcatggagctggaaacccagggaggagtggtggtgtttt---tgtttgagagtcgtggagctggagacccacagagg----ag----- i calJac3.chr5 C 0 C 0 a score=6709.000000 s hg38.chr3_KI270935v1_alt 14762 15 + 197351 ttttagctcggggaa s panTro4.chr3 639089 15 - 202329955 ttTTAGCTCGGGgaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199668309 15 + 202140232 ttCTAGCTCGGGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777698 15 + 123690457 TTCTAGCTCGGGGAG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 41985 15 + 174439528 ttctagttgaggGTC i papAnu2.chr6 I 4 I 18 s calJac3.chr5 41954702 8 + 159171411 ctgcggtt------- i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89550186 1584 - 91010382 I a score=164829.000000 s hg38.chr3_KI270935v1_alt 14777 164 + 197351 gag---------ctgatgttctaccttgagggtcgtgcagctgcagacccggggaggagc-tga------tgttctagattgagggtcgtgc-----agctgcagacccggggaggag------ctgatgttct---------agattgagggtcgtgcagctgcagacccggggaggagc------tga------tgttctagattgaggg s panTro4.chr3 639104 164 - 202329955 gag---------ctgatgttctactttgagggtcctgcagctgcagacccggggaggagc-tga------tgttctagtttgagtgtcatgc-----agctgcagacccggagaggag------ctgatgttct---------agattgagggtcatgcacctgcagacccggggaggaac------tga------tgttctagtttcagtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199668324 164 + 202140232 GAG---------CTGATGTTCTACCTTGAGGGCCCTGCagctgcagacccggagaggagc-tga------tgttctagattgagggtcttgc-----acctgaagacttgaggaggag------ctgatgttct---------agattgagggtcgtgcagctggagagctggagaggagc------tta------tgttctagtttgaggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777713 164 + 123690457 TAG---------CTGATGTTCTACCGTGAGGTCCCTGCAGctgcagacccggagaggcat-tga------tgttgtagattgagggccgtgt-----agctggagacccggtgaggag------ctgatgttcc---------agtttgaggatgttgcagctgcagacgtggagaggagc------cga------tgttctagtttggggg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 42018 186 + 174439528 GAGTAGCCGCTATTGATGTTTTTGTTTAagggtcatggagctggagatACAGGGTGGAgcgttg------ttttctagtttgtgggtcGTGG-----ACCTGGAGACCTGTGGAGGAGGTGTCCTTGGTGTTTC---------TGGTTGAGGGTCGTGGAGTTGGAGACACGTGGAGGAGCCATTGTTGG------TATTTCTAGTTGAGGA i papAnu2.chr6 I 18 C 0 s chlSab2.chr4 89551770 162 - 91010382 gag---------ctgatgttccagtttgagggccgtgcagctggag-cccagggctgagc-cga------cgttccagtttgagggctgtgt-----agctggagacccagcagggag------ctgatgttcc---------agtttgagggccgtgcagctgtagatctg-gggggagc------tga------tgttccagtttgaggg i chlSab2.chr4 I 1584 I 13243 s calJac3.chr5 41954710 188 + 159171411 --g---------ttattgtttaagtctgaggATGGTGGAGCTGGAGCCCTGGGGAGGAGC-TGGTGCTGCTGTTCTTGTTTGAGGGTCTtgggttgaagctggagacccagggaggag------ccagtgttgtttttgtttaggtctgagggtcgtggagcttgagactctgggaggaac------tggtgccgttgttctagtttgaagg i calJac3.chr5 C 0 C 0 a score=39971.000000 s hg38.chr3_KI270935v1_alt 14941 57 + 197351 tcgtgcagctgcagacccggggaggagctgatg---------ttctagat-------tgagggtcgtgcagct s panTro4.chr3 639268 57 - 202329955 tcgtgcagctgcagacacggggaggagctgatg---------ttctagtt-------tgagtgtcgtgcagct i panTro4.chr3 C 0 M 4730 s ponAbe2.chr3 199668488 57 + 202140232 tcttgcaactgcagacctggagaggagctgatg---------ttctagtt-------tgagggtcgagcagct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777877 57 + 123690457 tcttgcagccgaagacctggggaggagctgatg---------ttccggtt-------tgaggatcttgcagcc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 42204 64 + 174439528 TCGTGGAGCTGGAGTCCCGCAGAGAATCCGGTG---------TTTGGTGTTTCTTGCTGAGGGTCATGGTGCT i papAnu2.chr6 C 0 I 50 s calJac3.chr5 41954898 66 + 159171411 tcatagaactggagacccagacaggagctggtgctactggtattcagatc-------tgagggtggtggagct i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89551932 13243 - 91010382 I a score=122915.000000 s hg38.chr3_KI270935v1_alt 14998 382 + 197351 gcagacccggggaggagctga------tgttctagattgagggtc-gtgcagctgcagacccggggaggagc------tgatgttctagattgagggtcgtgcagctgcagacccggggaggagctgatg-------ttctagattgagggtcgtgcagctgcag-------------------------------------------------acccggggaggagc------tgatgtt---------ctagattgagggtcgtgcagctgcagacc-cggggaggagc------tgatgttctagattgagggtcgtgcagctgcagacccggggaggagc-tga------tgttctagatagagggtcatgcagctgaagactcggggaggagctgatgttgt------agt------ttgagg-----------------------------------------------gtcatgcagttgaggactttgggaggagCTGATGTTGTT-CGT-------GTTGAGGGTCTTTCAGCTGGGG s ponAbe2.chr3 199668545 475 + 202140232 gcagacctggagaggaactga------tgtactagattgaaggtt-ttgcagctgcatacctggagaggagc------tgatgttcttgtttgagggtcatgcagctgcagacctggagaggagCTGATG-------TTCTAGATTGAGGGTCTTGCAGCTGAAGACTTGAGGAGGAGCTGATGTTGTTCGCTTTGAGGGTCTTTCACTTGGACACTCAGGGAGGAGC------TGATGTT---------CTACATTTAGGGTCACAGaactggagacc-tggagagaagg------tgatgttctagttttagagtcttgcagctgcagacccagaaaggagc-tga------tgttctagtttgagggtcttgcagctgcagagctggagaggagctgatgttct------aat------ttgagGGTCGTGCTGCTGCAGACCTGGAAGGGAGCTGATGTTCTACATTCAGAGTCGTGCAGCTGAAGACTTGGGAAGGAGCTGA---TGTT-CGC-------GTTGAGGGTCTTTCAGGTGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120777934 379 + 123690457 gcagacccggggaggagccga------tgttccggtttgagggtctttgcagccgtagaaccggggagaagc------tgatgttccggtttcagagtattgcagccgcggagccgtggaggagctgatg-------ttccagtttgagggtcttgcagctgcg--------------------------------------------------acccgggaaggagc------tgatgtt---------ctggtttgagggtcttgcagctgc-gacc-cgggaatgagc------tgatgttctggtttgggcgtcttgcagccgcagacccagggaggagc-tga------tgttccagtttaagggtcttgcagccacacacccggggaggagctgatgttcc------ggt------ttcagg-----------------------------------------------gtcttgcaggcgcagacccggggaggagctga---tgttccgg-------ttttagGGTCTTGCAGCTGCAG i nomLeu3.chr11 C 0 I 846 s papAnu2.chr6 42318 410 + 174439528 NNaGCC-------GGTGTTGG------TGTTTGTAGTTGAGGGTC-GTGTCGCTGGAGACCCGCGGAGGAGCCGgtgttggtgtttctagttgaggTTTGGGGAGTTGGAGACCCGTGGAGGAGCTGGTGTTAGTGTTTCTAG-TTGAGGGTTGTGGAGGAGAAG-------------------------------------------------ACCTGCAGAGGAGCCGgtgttggtgtt---------tctagttgaggTTTGGGAAGTTGGAGACC-TGTGGAGGAGCCATTGTTGGTGTTTCTCGTTGACTGTTGTGGAGCTGGAGATATAGGGTGATgcgttg------ttttctagtttgtggttTGCGGAGCTGGAGACCCGCGGAGGAGCCGGTTTTGT------TGTTTCTAATTGAGG-----------------------------------------------atcatggagctggagacctgCGGAGGAGCCCA---TGTT-GGTGTTTGTAGTTGAGGGTTTTGGAGCTGGAG i papAnu2.chr6 I 50 C 0 s calJac3.chr5 41954964 424 + 159171411 ggagacccagggaggagCCGGTGCTGCTGTTCTTCTTTGAGGGTG-GTGGAGCTGGAGACCCAAGGTGCAGCTGCTGCTGCTGTTCTAGTGTGAGGGTCTTGGAGCTGGAGCCTTGGTGAGGAGCCGATG-CTGCCTTTCAAGTCTGAGAGTCATTGAGCTGGAG-------------------------------------------------ATCCAGGGAGGAGC------CGGTGCTATCACCATGCAATTCTGAGGGTCATGGAGATGATGGCCTCAGGGAGGAGC-------ACAGTTGAAGTTTGAAGGTTGTG-AGCTGGAGATCCAGGGAGGAGC-TGGTGCTGCTGTTGTAGTTTTAGGGTTGGGGAGCTGGAGGCTTCGGGAGGAGCCAGTGCTGCCTCTCAAGT------CTGAGA-----------------------------------------------Gttgttgagctggagacccagggaggagccgg---tgct-gctgctgtaatttgaggatcatgaatctggag i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89551932 13243 - 91010382 I e panTro4.chr3 639325 4730 - 202329955 M a score=73601.000000 s hg38.chr3_KI270935v1_alt 15380 212 + 197351 ACTCAGGGAGG------AGCTGATAAtct------tgattaagggtcatggagctggagacccagacaggagc------tgatgttctagttagtggatcttccagctacagagtcagagaggagct-----------------------------------------------gatgttctagattgagggtcatgcagctgaatactcggggaggagc------tgatgttgtagtttgagggtcatgcagttgaggacttcgggaggagctgatgttg----tt s ponAbe2.chr3 199669020 257 + 202140232 ACTCAGGGAGG------AGCTGATAATAT------Tgattgagggtcatggagctggagacctggacaggaga------tgatgttctagttagtggatcttccagctgcagacccagggaggagctgatgttctactgttaggttcttgcagctgcagacccggagaggagaggatgttctagattgagagtcatgtagctgaagactc-aggaggagc------tgatgttgtagtttgaggttcatgcagttgaggactcagggaggagCTAATG-TG----TT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120779159 210 + 123690457 ACCCGTGGAGG------AGCTGATATTCC------GGTTTGAGGGTCTTGCATCTGCGGACCCGGGGAGGAGC------TGAAGTTCTGGTTTGAGGGTCTTGCAGCCGCAGACCCGGGGAGGAACT-----------------------------------------------GATGTTCCGGATTGGGGGTCTTGCagccgcagacccggggaggagc------tgatgttcccgtttcggagtattgcagctgcagacctggggaggagctgatg-t-----tc i nomLeu3.chr11 I 846 C 0 s papAnu2.chr6 42728 234 + 174439528 ACTCGCGGAGGAACTGCagttggtgtttc------tagttgatGTTTGTGGAGCGGGAGATACACGGTGGAgc-----attgttttctagtttgtgggttGTGGAGCTGGAGATCTGTGGAGGAGCTGTCATT-----------------------------------------GGTGTTTCTGGTTGAGGGTT-TGGAGTTGGAGACACATGGAGGAGCCAttgttggtgtttctagttgaggATCGTGGAGCTGGAGTCCCGCGGAGGATCCGGTGTTGGTGCTT i papAnu2.chr6 C 0 C 0 s calJac3.chr5 41955388 235 + 159171411 acctggggagg------agctagtgttgctgttgatgtttgagggtcaggaagctggagacccggggaggagccggtgctgctgttgtagtttgaggattgtggagctggagacccggggaggagctggtgct-----------------------------------------gcagctgtagtttgaggtttgtggagctgtagacccggggaggagctggcactgtagttgatgtttgagggtcgaggagctgga-atctggggaggagCCGGTGCTG----CT i calJac3.chr5 C 0 I 6840 e chlSab2.chr4 89551932 13243 - 91010382 I e panTro4.chr3 639325 4730 - 202329955 M a score=22126.000000 s hg38.chr3_KI270935v1_alt 15592 125 + 197351 cACGTTGAGGGTCTTTCagctg-gggactcagagagga------gctgataatcttgattgagggtcatggagctggaaacctagacaggagttgatgttctagttagtggatcttccagctgcagacccag s ponAbe2.chr3 199669277 126 + 202140232 CGCGTTGAGGGTCTTTCAGCTCTTAGACTCAGGGAGGA------GCTGATAAtcttgattgagggtgatggagctggagacccggacaggagctgatgttctagtcagtggatcttccagctgcagacccag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120779369 118 + 123690457 tgctttgagggtctcgcagctg-cagac-cagggagga------gctgatattcgggtttgagggtc------ttacagacccgtgaaggagctgatgttccagttGGACGGTCCTGCAGCCATGGACCTGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 42962 109 + 174439528 CTTGCTGAGAGTCATGGTGCTG-GAGACCTGTGGAGGAGAAGctgttggtgtttctagttgaaTGTTGTGAAGCTGGAGACCCGC-CAGGAGCCGGTGTTGGTGTTTGTAG--------------------- i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41955623 6840 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e panTro4.chr3 639325 4730 - 202329955 M a score=184780.000000 s hg38.chr3_KI270935v1_alt 15717 391 + 197351 ggaggagctgatgttctagtttgagggtcgtgcagctgaagacccggggaggagc------tgatgttctagattgagggtcgtggagctgcagacgcggagaggagc------tgatgttctagtttgagggtcgtgcagctggagacctggagaggagc-tgatgttct--agtttgaggttcttgcagctgcagacctggagaggagctgatgttct------agattgagggtcgtgcagctgcacacttggagaggagc------tgatgttctagattgagggtct-----------------------------------------------tgcagctgcagacctggagaggagctgatg-------ttctagtttgaggatcttgcagctgcagacccggagaggagc-tgatgttctactttgagggtcgtgcagctggagacctggagaggagctgatgtt s panTro4.chr3 644060 391 - 202329955 GGAGGAGCTGATGTTCTAGTTGAGGGGTCTTGCAGCAGCagacccggagaggagc------tgatgttgtagtttgagggtcttgcagctgcagacctggagaggagc------tgatgttctagattgagggtcgtgcagctgaagactcggagaggagc-tgatgttct--agattaagggtcatgcagctgaagactcagagagaagctgatgttct------agattgagggtcgtgcagctgcacacttggagaggagc------tgatgttctagattgagggtct-----------------------------------------------tgcagctgcagacctggagaggagctgatg-------ttctagtttgagGATCTTGCagctgcagacctggagaggagc-tgatgttctactttgagggtcgtgcagctggacacctggaggggagctgatgtt i panTro4.chr3 M 4730 C 0 s ponAbe2.chr3 199669403 393 + 202140232 ggaggagctgatgttctactgttaggttcttgcagctgcagacccggagaggagc------tgatgttctagattgagggtcatgcagctgaagactcggggaggagc------tgatgttgtagttagaggttcctgcagttgaggactctgggaggagC-TGATGTTGTTCGCGTTGAGGGTCTTTCAGCTGGAGACTCAGGGAGGAGCTGATAAtct------tgattgagtgtcatggagctggagacccggacaggagc------tgatattctagtcagtggatct-----------------------------------------------tccagctgcagaccccaggaggagCTGAGG-------TTCTACTGTTAGGTTCTTGCAGTTGCAGACTCGGAGAGGAGC-TGATGTTCTAGATTGAGGGTCATGCAGCTGAAGGCTCGGGGAGGGGCTGATGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120779487 437 + 123690457 GGAGGAGCTGATGTTCCGGTTTCAGGGTCTTGCagctgcggacccggggaggagc------tgatgttcttgtttgagggtcttgaagccgcggacccggggaggagc------tgatgttccggtttgagggtcttgcagccacagacccttggaggagc-tgatgttcc--ggtttgagGTTCTTGCAGCCGCGGAC-CAGGGAGGAGCTGATGTTCC------GGTTTCAGGGTCTTGCAGCCGCAGACCCGTGGAGGCGC------GGATGTTCCTGTTTGAGGGTTTTGTAGCCACAGACCCGGTTAGGTGCCAATGTTCTACATTGAAGGTCGTGCagccgcagacctggagaggagccgatg-------gtgtagtttgaggatcttgcagccaaagaccctgagaggcgc-cggtgtttcagtttgaggttcgtgcagccgaaaacccggggaggagccaatgtt i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 43071 403 + 174439528 --------------------TTGAGGGTCGTGTCGCTGGAGACCCGCGGAGGAGCCGgtgttggtgtttctagttgaggTTTGGGGAGTTGGAGACCCGTGGAGGAGCCATTGTTGGTGTTTCTCGTTGACTTTTGTGGAGCTGGAGATATAGGGTGATgcgttgttttct--agtttgtggttTGCGGAGCTGGAGACCCGCGGAGGAGCtggttttcttgtttctgtttgaGGATCGTGGAGATGGAGACCTGCGGAGGAGCCCGTCTTGGTGTTTGTAGTTGAGGGTTT-----------------------------------------------TGGAGCTGGAGACTCGCAGAGGAACTGCagttggtgtttctagt-tgatGTTTGTGGAGCTGCAGATACAGGGTGGAgcgttgttttctagtttgtgggttatggagctggagaccagtggAGGAGCTGGAGTT i papAnu2.chr6 C 0 I 11991 e calJac3.chr5 41955623 6840 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I a score=3018.000000 s hg38.chr3_KI270935v1_alt 16108 6 + 197351 ctagtt s panTro4.chr3 644451 6 - 202329955 ctagtt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199669796 6 + 202140232 CTAGTT i ponAbe2.chr3 C 0 I 285 s nomLeu3.chr11 120779924 6 + 123690457 ccagtt i nomLeu3.chr11 C 0 C 0 e calJac3.chr5 41955623 6840 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e papAnu2.chr6 43474 11991 + 174439528 I a score=95257.000000 s hg38.chr3_KI270935v1_alt 16114 669 + 197351 tgagggtcatgcaggtgaagactcggggaggagctgatgttctagtttgaaggtcttgcagctgcagacctggagaggagctgatgttctagtttgaaggtcttgcagctgcagacctggagaggagctgatgttctagattgagggtcgtgcagctgaagactcggg-----------------------------------------------gaggagctgatgttctagattaagggtcatgcagctgaagactcagggaggagctgaggttctagtttgagggtcgtgcagctgaagactt------------------------------------------------gggaggagctgagattctagtttgagggtcgtgcagcagaagactcagggaggagctgatgttctagattgagggccctacagctgcagacctgaagaggtgctgatgttcgagattgagggtcgtgcagctgaatactcggagaggagctgatgttatagtttgagggccctacagctgaagacccggagagtatctgatcttcgagattgagggtcatgcagctgaagactccgggaggagctgagttgctaatttgagggtcttgcagctgctgacttggggaggagctgatgttctagtttgagggccctacagttggaaatctgtacaggagctgatgttctagtttgagggtcatgcaggtgaaaaatcggggaggagctgatattctagtttg----------------------------------------------agggccctgc s panTro4.chr3 644457 716 - 202329955 tgagggtcatgcaggtgaagactcggggaggagctgatgttctagtttgagGGTCTTGCagctgcagacctggagaggagctgatgttgtagtttgatggtcttgcagctgcaaacctggagaggagctgatgttctagattgagggtcgtgcagctgaagactcggggaggagctgatgttctagattaagggtcatgcagctgaagactcagggaggagctgacgttctagtttgagggtcgtgcagctgaagactc-gggaggagctgagattctagtttgagggtcgtgcagcagaagactc-----------------------------------------------agggaggagctgatgttctagattgagggccctacagctgcagacctgaagaggagctgatgttcgagattgagggtcgtgcagctgaatactcagagaggagctgatgttatagtttgagggccctacagctgaagaccccgagagtatctgatcttcgagattgagggtcgtgcagctgaagactccgggaggagctgaggtggtaatttgagggtcttgcagctgctgacttggggaggagctgatgttctagtttgagggtcatgcaggtgaagaatcggggaggagctgatattctagtttgagGGCCCTGCAGCGAGAGATGCAGACAGGAGCTGATGTTGTAGTTTGAGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------------------------NNNNNNNNNN i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120779930 760 + 123690457 tgagggtagtgcagccgcagaccccgggaagagcagatattccagtttgagggtcgtgcagctgcattccaggggaggagctgatgttccagtttgagggtcgtgtacccgcagatccagggaagagctgatgttccagtttgagggtcgtgcaaacgcagaccaggg-----------------------------------------------gaggaggtgatgttccagtttgagggtcctgcagccgcagacccagggaggcgctgattttccaatttgagGGTCGTGCAGCCGCAGACCTCCGTGGGAGCTGATGTTCCGGTTTGAGGGTCTTGCATCCGCAGACCAGCGGAGGAGCTGGTGTTCCAGTTTGAGGGTCGTGCAGCCGCAGGCCCGGCGAGGAGCTGATCTGCT---TTGAGGGTCGTGCAGCCGCAGACCCGGGGAGGAGCTGATGTTCTGGTTTGAGGGTGGTGCAATCACGGACCCGGGGAGGAGCTGATGTTCCGGTTTGAAGGTCTTGCAGCCGCGGACCCGAGGAGGTGCTGATTTTCCGGTTTGAGGGTCTTGCAGCCGCGGACCTGGGGAGGAGCTGATGTTCCAGTTTGAGGGTCTTGCagccgcggacccggggaggagctgatgttccggtttgagggtcttgcagctgcggacccggggaggagctgatgttccggtttgacggtcttgcagccgcaaacccagggaggagctgatggtccagtttgagGGTCTTGTAGCCGTGGACTAGGGAGGAGCTGATGTTCTGGTTTCAGGGTCTTGC i nomLeu3.chr11 C 0 C 0 e calJac3.chr5 41955623 6840 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e papAnu2.chr6 43474 11991 + 174439528 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=4559.000000 s hg38.chr3_KI270935v1_alt 16783 130 + 197351 agctagagatgcagacaggagctga------tgttgtagtttgagggtcgtacagctgaagattcagggaggagc--tgctcgtgtatttttagggtcatgcagctgcagacccggagaggagc--tgatgttaaagatt s panTro4.chr3 645173 115 - 202329955 NNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNNNNNNNNNNNNNNNNNN---------------GGAGC--TGACATtctaatttgaggtccctacaggtggacacccggagaggagc--tgatgttaaagatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120780690 130 + 123690457 AGCCGCAGAGCCGTGGAGGCGCGGA------TGTTCTTGTTTGAGGGTTTTGCAGCCGCAGACCCGGGGAGGTGC--CAGTGTTCTACATTGAGGGTCGTGCagccgcagacctggagaggagc--cgatgttgtagttt i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 41962463 140 + 159171411 aactggaggtccagggaggagctggtgctgctgttgcagtctgagggtcgagcagctggagacccagggaggagcggtgttgctctagtttgaggttcctggagcaggagactaacagaggagtggtattgttttagttt i calJac3.chr5 I 6840 C 0 e chlSab2.chr4 89551932 13243 - 91010382 I e papAnu2.chr6 43474 11991 + 174439528 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=156998.000000 s hg38.chr3_KI270935v1_alt 16913 426 + 197351 gagggtcatgcagctgaagactctgggaggagc--tgacgttctaatttgaggtccctacaggtggacaccgagagagga---------gcttatgttctagattgagggtcatgcagcagaagactcggggaagagctgaggttgt---------agtttgagggtcgtgcagct-----------------------------------------------ggagaaccagacaggagctga----tgttgt-----agattgagcgtcgtgcagctgaagactcagggaggagctgatgttg----ttcgttttgagggtgtttcagctggagactcagggagga-----gctgacgttctagattgagggtcttgcagctgcagacctgtagaggaactgatgt--------tctagattgagggtcacgcagctgaagacttggggagaagctga---tg------ttctaacttgagggtcgtgcagctgaggactcggggaggagCTGAT-------GTTGACAGCTG s panTro4.chr3 645288 426 - 202329955 gagggtcatgcagctgaagactctgggaggagc--tgacattctaatttgaggtccctacaggtggacacccagagagga---------gcttatgttctagattgagggtcatgcagcagaagactcggggaagagctgaggttgt---------agtttgagggtcgtgcagct-----------------------------------------------ggagaaccagacaggagctga----tgttct-----agattgagcgtcgtgcagctgaagactcggggaggagctgatgttg----ttcgttttgagggtctttcagctggagactcagggagga-----gctgacgttctagattgagggtcttgcagctgcagacctggagaggaactgatgt--------tctagattgagggtgacgcagctgaaaacttggggagaagctga---tg------ttctaacttgagggtcgtgcagctgaggactcggggaggagCTGAT-------GTTGATGGCTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120780820 475 + 123690457 gaggatcttgcagccaaagaccctgagaggcgc--cggtgtttcagtttgaggtccgtgcagctgaaaacgcggggagga---------gccaatgttccagtttgagggtagtgcaggcgcagacccggggaagagcagatattcc---------agtttgagggtcgtgcagctgcattccaggggaggagctgatgttccagtttgagggtcgtgtacccgcagatccatggaagagctga----tgttcc-----agtttgagggtcgtgcaaccgcagaccaggggaggagctgatgt------tccagtttgagggtcgtgtacccgcagatccgggaaaga-----tctgatgttccagtttgagggtcgtgcagccacattcccggagaggagctgatga--------tccagtttgagggtcgtgcaaccgcagacacagggaagagctga---tg------ttccagtttgagggtcgtgcagccgcaggCCCGGCGAGGAGCTGATCTGC---TTTGAGGGTCG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 55465 405 + 174439528 GAGGGTTGTGGGGCTGAAGACCCGGACAGGAGC--TGGTGCT-----------------------------------------------ACCACTATTCAAATCTGAGGATGGTGGAGCTGGAGCCTTGGGGAGGAGCCGACACTGC---CTTTTAAGTCTGAGAGTCGTTGAGCT-----------------------------------------------GGAGGTCCACGGAGGAGCTGG----TGCTGCCACTGATGTCTTAGGTTGTGGAGCTGAAGAC-AGTGAAGGAGCCGGTGTGGCTATTCCTCTgtgagggtcgtggagctggagatCCAGGGGGAG-----A--GGTGATCTAGTTTGAGGTTCATGCAGCTGCAGACCCAGAGAGGAGCTGGCGTTTC-----TTTAGTTTGAGGGTTGCGCAGCTGTAGAACCCAGGAGGAGCTGGCATTT------TTCTAGTATTAGTGTCCTGCAACT--------GGAGAGGAGCTCATGTTCCAGTTTGAGGGCCG i papAnu2.chr6 I 11991 C 0 s calJac3.chr5 41962603 469 + 159171411 gaaggtctaggagctggagacccaaggaggagcagtgttgttctagtttggaggttgtccagcttgagatctagggaggagCTGGTGCTGCTGTTGTTTAAGGCCGAGGGtcgtggagctgatgatccaggaagaagcaagtgtttttgttgttcaagtctgagggttgtggagct-----------------------------------------------ggagacccagggaggaactgatttttattct-----agtttgagggttttggaactggagccccagggagtagCCAGTGCTGCCACTGATGTCTTAGAGttgtggagctgaagatccaggaggagctggtgctgatgttctagtttaaggattgtgcagctgcagacccggacaggagccgttgctactgctgtcaaatctgagggtcatagagctggagccttgcagagaagccgg---tgcttcatctcaagtctgaGAGTTGTTAAGCTGGAGATTTAGGGAGGTGCCGGT-----------GCAGCTG i calJac3.chr5 C 0 I 191 e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=21958.000000 s hg38.chr3_KI270935v1_alt 17339 46 + 197351 TGCAGCTGGAGATCCGGCGGGGAGCTGATGTTCCGGTTTGAGGGCC s panTro4.chr3 645714 46 - 202329955 TGCAGCTGGAGATCCGGCGGGGAGCTGATGTTCCGGTTTGAGGGCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120781295 46 + 123690457 TGCAGCCGCAGACCCGGGGAGGAGCTGATGTTCCGGTTTGAGGGTC i nomLeu3.chr11 C 0 I 1841 s papAnu2.chr6 55870 46 + 174439528 TGCAGCTGGAGACCTGAGGGGGAGCTGATGTTCCAGTTTGAGGGCT i papAnu2.chr6 C 0 I 18 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=20875.000000 s hg38.chr3_KI270935v1_alt 17385 54 + 197351 GGGGAGCTGATGTTCCAGTTTGATGG-CCGTGCACCTGGAGACCCAGGGAGGAAC s panTro4.chr3 645760 54 - 202329955 GGGGAGCTGATGTTCCAGTTTGATGG-CCGTGCACCTGGAGACCCAGGGAGGAAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120783182 54 + 123690457 GAGGAGCTGATGTTCCGGTTTGACGG-TCTTGCAGCCGCAAACCCAGGGAGGAGC i nomLeu3.chr11 I 1841 I 368 s papAnu2.chr6 55934 55 + 174439528 GGGGAGCCGATGTTCCAGTTTTAAGGTCCGTGCAGCTGGACACCCTACGGGGAGC i papAnu2.chr6 I 18 I 821 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=10728.000000 s hg38.chr3_KI270935v1_alt 17439 119 + 197351 Atcaaactggaacatctgctccccgcagtgcctccagctgcatggctcccaaactggaacatcggttcccacccgggtctccagctgcacggccctcaaactgcaacatcggctatccc s panTro4.chr3 645814 119 - 202329955 ATCAAACTGGAACATCTCCTTCCCGCAGTGCCTCCAGCTGCATGGCTCCCAAACTGGAACATCAGTTCCCACCCGGGTCTCCAGCTGCACGGCCCTCAAACTGCAACATCAGCTACCCC i panTro4.chr3 C 0 M 1154 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e papAnu2.chr6 55989 821 + 174439528 I e ponAbe2.chr3 199669802 285 + 202140232 I e nomLeu3.chr11 120783236 368 + 123690457 I a score=0.000000 s hg38.chr3_KI270935v1_alt 17558 465 + 197351 cgagtctccagctgcacggccctcaaactggaacatcagcttctccccaagtctttcagctgaatggccctcaaactggaacttcagctccccaccgggtatccagctgcatggccctcaaactggaagttcagctccccaccgggtctccagctgcacggccctcagactggaacatcagctccccactgggtctccagctgcacggccctcagactggaacatcagctccccaccgggtctccagcttcacggccctcaaactggaacttcagctccccaacgggtctccagcttcacggccctcaaactggaacttcagctccccaccgggtatccagctgcatggccctcaaaccggaagttcggctcccccgcgggtctccagctgcacggccctcagactggaacatcagctccccgccgggtctccagctgcacggccctcaaactggaaTAGTTTGA e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e papAnu2.chr6 55989 821 + 174439528 I e ponAbe2.chr3 199669802 285 + 202140232 I e nomLeu3.chr11 120783236 368 + 123690457 I e panTro4.chr3 645933 1154 - 202329955 M a score=459.000000 s hg38.chr3_KI270935v1_alt 18023 7 + 197351 ACTCAGC s papAnu2.chr6 56810 7 + 174439528 ACTCATC i papAnu2.chr6 I 821 C 0 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I e nomLeu3.chr11 120783236 368 + 123690457 I e panTro4.chr3 645933 1154 - 202329955 M a score=51807.000000 s hg38.chr3_KI270935v1_alt 18030 337 + 197351 GGGGAGCTGATGTTCCAGTTTGAGGGCTGTGCagctggagacccggcagggagctgatgttccggttgtagggctgtgcagccggagacccagggggaagctgatgttccagttgtagggccgtgctactggagacccaggggtggagctgatgttccagtttgagggccatgcagttgatgacccggcggggagctgatgttcaagtttgaggtctgtgcagctggagacccgcgggg-gagctgatgttccagtttgatggccatgcagctggaggctctgatgggagctgatgttgcaatttgagggccatgcagctggagacctggcggggagg s nomLeu3.chr11 120783604 336 + 123690457 gaggagctgatgttccagtttgagggtcgtgtacccgcagatccatggaagagctgatgttccagtttgagGGTCGTGCAACCGCAGACCAGGGGAGGAGCTGATGTTCCGGTTTGGGGGTCTTGCAGCCACTGACCC-GGGGAGGAGCTTGTGTTCCGGTTTGGGGGTCTTGCAATCACGGACCCGGGGAGGAGCTGATGTTCCGGTTTGAGGGTGGTGCAATCACGGACCCGGGGAG-GAGCTGATGTTCCGGTTTGAGGGTCTTGCAGCCGCGGACCTGGGGAGGAGCTGATGTTCCAGTTTGAGGGTCTTGCAGCCGTGGATCTGGGGAGGAGC i nomLeu3.chr11 I 368 C 0 s papAnu2.chr6 56817 337 + 174439528 AGGAAGCTGATGTTCCAATTGGAGGGCCGGGGAGCTGGACACACAGGGGTAAGCTAATGCTCCAGTTTGAGGGCAGTGCTGCTGTAGACCCAGTGGGGAGCTGATGTTCCAGTTTGAGGGCTGTGCAGGTGGACACAG-GGCAGAGAGCTGATGTTCCAGTTTGAGCACCATGCAGCTGGAGACTCAGCGGGGAGCTGATGTTGCAGTTAGAGGTCCGTGCAGCTGGACACATGGCAAGAGAGCTGATGTTCTAGTTTGAGAACCGTGCAGCTGGAGACCAGGAGGGGAGCTGATGTTCCAGTTTGAGGGCCGTGCAGCTGGAGACCAGGAGGGGAGC i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I e panTro4.chr3 645933 1154 - 202329955 M a score=54126.000000 s hg38.chr3_KI270935v1_alt 18367 197 + 197351 tgatgttccagtttgagggccatgcagctggtgacctggcagggagctgatgttccagtttgaggaccgtgctcctggagacctag-cggggagctgatgttccagtttaagg-ccatgcagctgtatgcccgg-ggggaactgatgttgcagt-----------------------------------------------ttgagGGCCGTGCATCGGGAGACCCGGTGGGGAGCCAGTGTTGCAG s panTro4.chr3 647089 200 - 202329955 TGATATTCCAGTTTGAGGGCCGTGCagctggagacccggcagggagctgatgttccggttgtagggctgtgcatctggagacccgggcggggagctgatgttccagtttaagggccatgcagctgtatacccggtggggagttgatgttccagt-----------------------------------------------ttgagGGCCGTGCATCTGGAGACCCGGTGGGGAGCCAGTGTTGCAG i panTro4.chr3 M 1154 C 0 s nomLeu3.chr11 120783940 245 + 123690457 TGATGTTCCGGTTTGACGGTCTTGCAGCTGCGGACCCGGGGTGGAGCTGATGGTCCGGTTTGAGCGTCTTGTAGCCGCGGACCAGA--GAGGAGCTGATGTTCTGGTTTCAGGGTCTTGCAGCCGCAGACCCGTGGAGGCGCGGATGTTCCTGTTTGAGGGTTTTGCAGCCGCAGACCTGGGGAGGTGCCAATGTTCTACATTGAGGGTCGTGCAGCCGCACACCTGGAGAGGAGCCAATGTTGTAG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57154 179 + 174439528 TGATGTTCCAGTTTGAGGGCCGTGCAGCTGGAGAACCGTGGGGGAGTTGATGTTCCAGTTTGAGGGCCGTGCAACTGGAGATTCAG-GGTGGTGCCGATGTTCCACTTTGAGGGCGATGCAGCTGGAGACCCGG-TGGGAGCTGATGTTCCAGT-----------------------------------------------TTCAGGGCC-------------------CAGAAGCTGATGTTCCAG i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41963072 191 + 159171411 I e chlSab2.chr4 89551932 13243 - 91010382 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=-293.000000 s hg38.chr3_KI270935v1_alt 18564 1 + 197351 G s panTro4.chr3 647289 1 - 202329955 G i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120784185 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57333 1 + 174439528 T i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89565175 1 - 91010382 G i chlSab2.chr4 I 13243 C 0 e calJac3.chr5 41963072 191 + 159171411 I e ponAbe2.chr3 199669802 285 + 202140232 I a score=23997.000000 s hg38.chr3_KI270935v1_alt 18565 24 + 197351 TTGAGGGCCGTGCAGCTGGAGACC s panTro4.chr3 647290 24 - 202329955 TTGAGGGCCGTGGAGCTGGAGACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670087 24 + 202140232 TTGAGGGCTGTGCATCTGGAGACC i ponAbe2.chr3 I 285 C 0 s nomLeu3.chr11 120784186 24 + 123690457 TTGAGGATCTTGCCGCCGCAGACC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57334 24 + 174439528 TTAAGGGCCATGCAGCTGGAGACA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89565176 24 - 91010382 TTGAGGGCCCTGCAGCTGGAGACC i chlSab2.chr4 C 0 C 0 e calJac3.chr5 41963072 191 + 159171411 I a score=1314.000000 s hg38.chr3_KI270935v1_alt 18589 1 + 197351 C s panTro4.chr3 647314 1 - 202329955 C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670111 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784210 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57358 1 + 174439528 C i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89565200 1 - 91010382 C i chlSab2.chr4 C 0 I 881 s calJac3.chr5 41963263 1 + 159171411 C i calJac3.chr5 I 191 C 0 a score=178336.000000 s hg38.chr3_KI270935v1_alt 18590 285 + 197351 TGTGGGGAGCTGATGTTC----------------------------------------------------------------------------------------------TTGTTTGAGAGCCGTGCagctggagaccctgtggg--gagctga---tgtt------cctgtttgagagctgtgcagctggagatctggtggggagctga------tgttccagtatgagggccgtgcggctggagacctggtggggagctga------tgttc-cagtttgagggccgtgcacctggagacccggcagggagctga------tgttccagtttgagggctgtgcagctggataccgggggtggagctga------tgttccagtttgagggccatgcatctggagacccagt s panTro4.chr3 647315 377 - 202329955 GGCGGGGAGCTGATGTTCcaggttgacacg-gtatagctggag-acccggggggaactgatgttgcagtttgagggccgtgcatctggagacccggtggggagccagtgttgcaggttgagggccgtgcagctggagaccctgtggg--gagctga---tgtt------cctgtttgagAGCCGTGCagctggagatctggtggggagctga------tgttccagtatgagggccgtgcagctggagacctggtggggagctga------tgttc-cagtttgagggccgtgcagctggatacccggcagggagctga------tgttccagtttgagggctgtgcacctggagacctggcagggagttga------tgttctagtttgagggccgtgcagctggagacccagt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670112 286 + 202140232 GGTGGGGAGCCAGTGTTC----------------------------------------------------------------------------------------------CAAGTTGAGGGCCATGGAGCTGAAGACCCGGTGGGGTGAGCTGA---TGTT------CCAGGTTGAGGGCCGTGCTGCTGGAGACCCAGCGGGGAGCTGA------TGTTGCAGTTTGA-GGTGGTGCAGCTGGACAACGGGGGGGGAACTGA------TGTTG-CAATTTGAGGGCCGTGCAGCTGGAGACCCTGTGGGGAGCTGA------TGTTCCAGTTTGAGGGCTATGCATCTGGAGACCTGGTGGGGAGCCGA------TGTTTCAGTTTGAGGGCCGTGCCTctggatacccgga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784211 332 + 123690457 TGAGAGGCGCCAGTGTTCCAGTTTGAGGTTCATGCAGCCGAAATCCCCGGGTGGAAGCGATgttc-----------------------------------------------cattttgagggtcgtgcagccgcagacccggggaa--gagctga---tgtt------ccagtttcaggatcgtgtagctgcagacctggggaagagctga------tgttccagtttcagggtcgttcagccacagaccaggggaggagctga------tgttc-cagtctgagggccgtgcagcggcagactcggggaggcgctga------tgttccaatttcagGGTCGTGCagccgcagacccggggaggtgctga------tgttccggtttgagggtcttgcagccacggacccggg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57359 289 + 174439528 GGCGGGGAGCTCATATTC----------------------------------------------------------------------------------------------CAATTTGAGGGTCGTGCAGCTGGAGAACTAGGGAG--GAGCTGatgttgtt------ttcatttgagaGCCGTGGAGCTGGACAGCTGGAGAGGAACTGG------TGTTCTAGTTTGATGGTTGTAGAGCTGGGGATGCAGGCAGGAGCTGT------TCTTTATAGTTTGAGGGCCATGGAGCTGAAGACCCTGGGAGGAGC---------TGTTCTAGCTTGAGGGTCGTGCAGCTGGACACCCTAGGAGGGGCTGA---TGTTGTTGCAGTTTGAGTATTGTGCAGCTGGAGATCTAGT i papAnu2.chr6 C 0 I 295 s calJac3.chr5 41963264 315 + 159171411 AGGGAGTAGCTGGTGCTGCTGTTC----------------------------------------------------------------------------------------AAATTTGAGGGTCAG------GGAGACCTGGGGAG--GAGCCAG---TGATGCCTGCCACGTCTGAGAGTCACTGAGCTGGAGATGCAGGGAGGAGCTGGTGCCGCTGTTGTAGTTTGAGGATTGTGAATCTGGAGACCCGGGGAGGAGCTGGTGCCGCTGTTG-tagtttgaggattgtgaatctggagacccggggaggagctggtgccgctgttgtagtttgaggattgtgaatctggagatccagggaggagctggtgctgctgttgtagtttgagggtcatggaggtgaagatccagg i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89565201 881 - 91010382 I a score=24546.000000 s hg38.chr3_KI270935v1_alt 18875 39 + 197351 tggtagccagtgttgcaggt------tgagGGCTGTGGAGTTGGA s panTro4.chr3 647692 39 - 202329955 gggtagccagtgttgcaggt------tgagggctgtggagctgga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670398 39 + 202140232 ggggagctgatgttgcaggt------tgagggccttggagctgga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784543 39 + 123690457 gaggagctgatgttccggtt------tgagggtcttgcagccacg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57943 38 + 174439528 -CGGTGGTGGTGTTTCTCGT------TGAGGATTGTGGAGCCAGA i papAnu2.chr6 I 295 C 0 s calJac3.chr5 41963579 45 + 159171411 gaggagccggtgctgctgtttaagtctgaggatcgtggagctAAA i calJac3.chr5 C 0 T 7606 e chlSab2.chr4 89565201 881 - 91010382 I a score=35868.000000 s hg38.chr3_KI270935v1_alt 18914 80 + 197351 GACCCGGGTTGGGG--------------------------------------------------GGAGCTGATGTTCCAGGTTGAGGGCCATGCTgctggagacccagcggggagctgatgttgcagttt s panTro4.chr3 647731 80 - 202329955 gacccgggttgggg--------------------------------------------------ggagctgatgttccaggttgagggccgtgctgctggagacccagcggggaactgatgttgcagttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670437 77 + 202140232 gacctgggc---gg--------------------------------------------------ggatctgatgttacagtttgagggccatgaagctggagacccggtggggtactgatgttgcagttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784582 76 + 123690457 gacccggg----ga--------------------------------------------------ggagctgatgttccagtttgagggtcttgcagccgcaaacccagggaggagctgatgttccagttt i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 57981 129 + 174439528 GATACGGGGTGGAGCGTTGTTTTGTAGTTTGtgggtcatggagctggagaccagtggaggagctggagttggtgtttctagttgaggGTCGTG-AGCTGGAGACCCATGCAGGAGCTGgagttggtgttt i papAnu2.chr6 C 0 I 573 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=7355.000000 s hg38.chr3_KI270935v1_alt 18994 27 + 197351 ga-gGCGGTGCAGCTGGACATGCAGGGG s panTro4.chr3 647811 27 - 202329955 ga-ggcggtgcagctggagacccagggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670514 27 + 202140232 gagggccatgcagctggatac-ctggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784658 27 + 123690457 gagggtcttgcagccgtggac-caggga i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 58683 27 + 174439528 -AGGGCTGTGGAGCTAGAGATACAAGGT i papAnu2.chr6 I 573 I 2115 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=24788.000000 s hg38.chr3_KI270935v1_alt 19021 42 + 197351 GGAAGTGATGTTGCAATTTGAGGGCTGTGCagctggagaccc s panTro4.chr3 647838 42 - 202329955 ggaactgatgttgcaatttgagggctgtgcagctggagaccc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670541 42 + 202140232 ggacctgatgttgcagtttgagggctgtgcacctggagcccg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784685 42 + 123690457 ggagctgatgttccagtttcagggTCTTGCAGCCGCAGACCT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 60825 42 + 174439528 ggagttggtgtttctagttgagggtcgtggagctggagaccc i papAnu2.chr6 I 2115 I 1341 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=9557.000000 s hg38.chr3_KI270935v1_alt 19063 43 + 197351 -------tgtggggagctgatgttcctgtttgagggtctcggagctg-------------------atg s panTro4.chr3 647880 43 - 202329955 -------tgtggggagctgatgttcctgtttgagggcctgggagctg-------------------atg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670583 27 + 202140232 -------ggggtggagctgatattccagtttgag----------------------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784727 62 + 123690457 -------GTGGAGGCGCGGATGTTCCTGTTTGAGGGTTTTGTagctgcagacccagagaagtgccaatg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 62208 50 + 174439528 tgTGGAGGAGCTGGAGTTGGTGTTTTTagttgagggtcgtggagctg-------------------gag i papAnu2.chr6 I 1341 I 2069 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=13704.000000 s hg38.chr3_KI270935v1_alt 19106 41 + 197351 ttcca-gtttaaggccatgcagctggagacccggtggggagc s panTro4.chr3 647923 41 - 202329955 tgcca-gtttaaggcaatgcagctggagacccggtggggagc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670610 29 + 202140232 ------------ggctgtgcagctggagacctgat-gagagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784789 42 + 123690457 ttctacattgagggtcgtgcagccgcagaactggagaggagc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 64327 42 + 174439528 TTTTAGTTTGTGagtcatggagctggagacctgTGGAGGAGC i papAnu2.chr6 I 2069 I 2415 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=11774.000000 s hg38.chr3_KI270935v1_alt 19147 19 + 197351 tgatgttccagtttgaggg s panTro4.chr3 647964 19 - 202329955 cgatgttccagtttgaggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670639 19 + 202140232 tgatgttccagtttgcagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784831 19 + 123690457 tgatgttgtagtttgagga i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 66784 19 + 174439528 TGGTGTTTCTGGTTGAGGG i papAnu2.chr6 I 2415 I 413 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=8982.000000 s hg38.chr3_KI270935v1_alt 19166 18 + 197351 ccatgcatctggagaccc s panTro4.chr3 647983 18 - 202329955 ccgtgcatctggagaccc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670658 18 + 202140232 ccgtgcatctggaggcct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784850 18 + 123690457 tcttgcagccgcagaccc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 67216 18 + 174439528 TTGTGGAGCTGGAGATAC i papAnu2.chr6 I 413 I 1880 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=6376.000000 s hg38.chr3_KI270935v1_alt 19184 18 + 197351 ggtggggagctgatgttg s panTro4.chr3 648001 18 - 202329955 ggtggggagctgatgttg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670676 18 + 202140232 ggcagggagctgatgttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784868 18 + 123690457 tgagaggagccggtgttt i nomLeu3.chr11 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I e papAnu2.chr6 67234 1880 + 174439528 I a score=13087.000000 s hg38.chr3_KI270935v1_alt 19202 58 + 197351 caggttgagggccattcatctggagaccc------agtggggagctgatgttgcaggttgaggg s panTro4.chr3 648019 12 - 202329955 caggttgagggc---------------------------------------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670694 58 + 202140232 cagtttgagggccgtgcatctggagacct------ggtggggagctgatgttgcaggttgaggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784886 58 + 123690457 cagtttgaggttcgtgcagccgaaaaccc------ggggagaagccgatgttccagtttgaggg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 69114 64 + 174439528 ctagttgagggtcgtggagctggagacccatgGAAGAGGTGGAGTTGGTGTTCCTAGTTGAGGG i papAnu2.chr6 I 1880 I 1060 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=12639.000000 s hg38.chr3_KI270935v1_alt 19260 30 + 197351 ctgtgcacctggagccccggg-gtggagctg s panTro4.chr3 648031 29 - 202329955 -tgtgcacctggagccccggg-gtggagctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670752 31 + 202140232 ccgtggagctgcaggcctgggcggggggcta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784944 30 + 123690457 tagtgcagccgcagacccggg-gaagagcag i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 70238 30 + 174439528 tTGCGAAGCTGGAGTCCTGCG-GTGGAGCCG i papAnu2.chr6 I 1060 I 2707 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=25963.000000 s hg38.chr3_KI270935v1_alt 19290 45 + 197351 atattccagtttgagggccgtgcagctggcaatctggtggggagc s panTro4.chr3 648060 45 - 202329955 atattccagtttgagggccgtgcagctggcgatctggtggggagc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670783 45 + 202140232 atgttccagtttgagggccatgaagctggagacccagggtggaac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120784974 45 + 123690457 atattccagtttgagggtcgtgcagccgcattccaggggaggagc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 72975 45 + 174439528 gttttctagtttgtgggtcgtggagctggagacctgCAGAGGAGC i papAnu2.chr6 I 2707 I 1441 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=214785.000000 s hg38.chr3_KI270935v1_alt 19335 436 + 197351 tgatgttccagtttgagggccatgcagctggagaccgggcagggagctcatgttccagtttgcaggcagtgcagctggagacccggcggggagctgatgttccagtt---------tgaggtccgtgcagctggagatctggtggggagctgat------gttccagtttgag-------------------------------------------------ggccctgcagctggagacccgtgg-ggatctgatgttcc------agtttgagggtggtgctgctggcgacccaggcgggagctgatg---ttctagttttagggccctacagctggagacccggggaggagctgacatt---ccctttcgagggctgtgcaggtggagacctggggaggaactga------tgttgttctaatttgagtgtggtgcagctgGAGATCCAGGGATGAGATGGCCCTGCGGTTCAAATATGAGGGTCCCGGAGCTGGACTCTACGTGAGGAACCAATG s panTro4.chr3 648105 436 - 202329955 tgatgttccagtttgagggccatgcagctggagacccggcagggaggtcatgtttcagtttgcaggcagtgcagctggagacccggcggggagctgatgttccagtt---------tgaggtccgtgtagctggagatctggtggggagctgat------gttccagtttgag-------------------------------------------------ggccctgcagctggagacccgtgg-ggatctgatgttcc------agtttgagGGTGGTGCTgctggcgacccaggcgggagctgatg---ttctatttttagggccctgcagctggagacctggggaggagctgacgtt---cccgttcgagggctgtgcaggtggagacctggggaggagctga------tgttgttctaatttgagtgtggtgcagctgGAGGTCCAGGGATGAAATGGTCCTGCGGTTCAAATATGAGGGTCCCGGAGCTGGACTCTACGTGAGGAACCAATG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199670828 436 + 202140232 tgatgttgcagtttgagggacatgcagctggATATCTGGCTGGGAGCTGAAGTTGCAGTTTGAGGGCTGTGCACCTGGAGCCCCGGGGTGGAGCTGATATTCCAGAT---------TGAGGGCCGTGTAGCTGGAAATCTGGTAGGGAACTGTT------GTTCCAGTTTAAG-------------------------------------------------GGCCCTGCATCTGGAGACCCGTGG-GGATCTGATGTTCC------AGTTTGAGGGTGGTGCAGGTGGCGACCCGGGCGGGAGCTGATG---TTCTAGTTTTAGGGCCATGCAGCTGGAGACCCGGGGAGGAGCTGACATT---CACGTTCGACGTCTCTGCAGGTGGAGACCTGGGGAGGAGCTGA------TGTTGTTCTAATTTGAGTGTGGTGCAGCTGGAGATCCAGGGATGAGATGTTCCTGCAGTTCAAATATGAGGGTCCCGGAGCTGGAATCTACATGAGGAGCCAATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785019 421 + 123690457 tgatgttccagtttgagggtcgtgcagccacagacccgggtaagagctgatgttccggtttgagGGTGGTGCAGCCATGGACCCGAGGAGGAGCTTCTGTTCTGGTT---------TCTGGGTCTTGCAGCCACGGATCCAGGGAGGAGCTCAT------GTTCTGGTTTGAG-------------------------------------------------GATGATGCAGCCGCTGACCGGTGGAGGAGCTGATATTCC------GGTTTGAGGGTCTTGCATCTGCGgacccagggaggagctgaag---ttccagtttgagtgtcttgcagccgcagacccagggaggagctgatgtt---ccggattgGGGGTCTTGCAGCCGCAGATCCGGGGAGGAGCTGA---------TGTTCCCGTTTTGGAGTATTGCAGCCGCAGACCTTGGGAGGAGCTGAT------GTTCTGCTTTGAGGGTCTCGCagctgcagacca-gggaggag------ i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 74461 518 + 174439528 TGTTGTTCTAGTTTGTGGGCCCTGGAGCTGGTGACCTGGGGAAGAGCTGATGTTGTAG-TTGAGGGTCGTGTAGCTGGAGATGCAGGGAGGAGCTGGTTCTTCTGTTGTGTAAATCTGAAGGTCGTCGAGCTGGAGATCCACGGAAGAGCTAGTGCTGAGGTTCAAGTCTGAGAGGCTCGGAGCTTGAGCCCCTGGGTGGAGCTGGAGCTGCCACTGTCTTAGGTTGTAAAGCTGGAGACCTGAGGAGGAGCTGGTGTTGCTTTTGTAGTGTGAGGtttgtggagctggagacccagggaggagctggtGTGTTTCTAGTTGGATTGTCATGCAGTTGGCGACCCGGGGATGAGCTGATGTTGTCCTAGTTTGAGTGTCGTGGAGCTAGAGACCCACGGATgagctggtgctgctgctgtTTAAATCTGAGGGTGGTGGAGCTGGAGATCCGGGGAAGAGCTGGTGCTGCGGTTCAAGTCTGAGGCTGTCAGAGCTGGAGCCTCCAGGAAGAGTAGGTA i papAnu2.chr6 I 1441 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89565201 881 - 91010382 I a score=20030.000000 s hg38.chr3_KI270935v1_alt 19771 22 + 197351 CTGCCTCTGATGTCTTAGGTTG s panTro4.chr3 648541 22 - 202329955 CTGCCTCTGATGTCTTAGGTTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671264 22 + 202140232 CTGCCTCTGATGTCTTAGGTTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785440 16 + 123690457 ------ctgatattcaggtttg i nomLeu3.chr11 C 0 I 142 s papAnu2.chr6 74979 22 + 174439528 CTGCCACTGATGTCTTAGGTTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89566082 22 - 91010382 CTGCCACTGATGTCTTAGGTTT i chlSab2.chr4 I 881 C 0 e calJac3.chr5 41963624 7606 + 159171411 T a score=11460.000000 s hg38.chr3_KI270935v1_alt 19793 10 + 197351 TGGAGCTGGA s panTro4.chr3 648563 10 - 202329955 TGGAGCTGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671286 10 + 202140232 TGGAGCTGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785598 10 + 123690457 tgaagccgcg i nomLeu3.chr11 I 142 C 0 s papAnu2.chr6 75001 10 + 174439528 TGGAGCTGGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89566104 10 - 91010382 TGGAGCTGGA i chlSab2.chr4 C 0 I 2264 e calJac3.chr5 41963624 7606 + 159171411 T a score=4707.000000 s hg38.chr3_KI270935v1_alt 19803 9 + 197351 AACTCGCGG s panTro4.chr3 648573 9 - 202329955 AACTCACGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671296 9 + 202140232 AACTCGTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785608 9 + 123690457 gacccgcgg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 75011 9 + 174439528 GACCTAAGG i papAnu2.chr6 C 0 I 5 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89566114 2264 - 91010382 I a score=21941.000000 s hg38.chr3_KI270935v1_alt 19812 33 + 197351 AGGAGCTGGTATTGGTGTTTCTAGTTGAGGGTC s panTro4.chr3 648582 33 - 202329955 AGGAGCTGGTATTGGTGTTTCTAGTTGAGGGTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671305 33 + 202140232 AGGAGCTGGTATTGGTGTTTCTAGTTGAGAGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785617 27 + 123690457 aggagc------tgatgttccagtttgagggtc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 75025 27 + 174439528 GAAGGCTGGTGTTGTAGTTTGAGGTTC------ i papAnu2.chr6 I 5 C 0 s chlSab2.chr4 89568378 33 - 91010382 AGGAGCTGGTGTTGGTGTTTGTAGTTGAGGGTC i chlSab2.chr4 I 2264 I 3268 e calJac3.chr5 41963624 7606 + 159171411 T a score=2054.000000 s hg38.chr3_KI270935v1_alt 19845 3 + 197351 GTG s panTro4.chr3 648615 3 - 202329955 GTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671338 3 + 202140232 GTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120785644 3 + 123690457 ttg i nomLeu3.chr11 C 0 I 3854 s papAnu2.chr6 75052 3 + 174439528 GTG i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89568411 3268 - 91010382 I a score=600.000000 s hg38.chr3_KI270935v1_alt 19848 1 + 197351 G s panTro4.chr3 648618 1 - 202329955 G i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199671341 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 75055 1 + 174439528 G i papAnu2.chr6 C 0 I 438 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89568411 3268 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=118224.000000 s hg38.chr3_KI270935v1_alt 19849 512 + 197351 TATTTCCAGGGTTTCACAGAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAACTCAGTCATTACCAATAGAAAAAGTATCCACTGTATTTATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGAatatatatatatatatatatatatatatatatatatatatatatatatatataAAACTTAAGGTTCTATTGTATGTATCCGAACAATAAAATCTGGAAACCAGCATGAAACTCTATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTGGAGCTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTATAAACTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTACTTTCCAGTTTAAAAACTTTAATCCTAAATTAAAAAAAAAA---------ATCTATACACAAACCACTGATTTGCCCAGACCaaagaaagaaagaaagaaagaaa s panTro4.chr3 648619 480 - 202329955 TATTTCCAGGGTTTCACAAAGGCCAGATTTTATTTCAGTTACTCAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAACTCAGTCATTACCAATAGAAAAAGTATCCACTGTATTCATCTCTTATACAAACAGAAAAATATAACATTTTCCCCCTTAGaata-------------------------------atatatatatatatatataaaaCTTAAGGTTCTATTGTATGTATCCGAACAGTAAAATCTGGAAACCAGCATGAAACTCTATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAAAACTGCTAGAGCTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTATAAAGTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTTCTTTCCAGTTTAAAAACTTCAGTCCTAAATTTAAAAAAAAA----------TCTATATACAAACCACTGATTTGCCCAGACCaaagaaagaaagaaagaaagaaa i panTro4.chr3 C 0 I 582 s ponAbe2.chr3 199671342 484 + 202140232 TATTTCCAGGGTTTCACAAAGGCCAGATTTTATTTCAGTTACTTAGAAGAGAAAGAAAATGTCTTCTGAAAGAGGTGAACTCAATCATTACCAATAGAAAAAGTATCCACTGTATTAATCTCTTATTAAAACAGGAAAATATAACATTTCCCCCCTTAGAATA-------------------------------ATGTATATATATGT------AACTTAAAGTTCTATCATATGTAGCCAAACAATAAAATCTGGAAACCAGCATGAAACCCCATTATTCACATGTTAAAATGTTGAAACTATGACCAAAATATGAATACTGCTAGAGTTATCAGAAAGACACAAGACAAAAAGCTTCTTGCATATGTATAAAGTAAATGTGATAATCTCAAAAAACTGTTCAAAATTATAATTACTTTCCAGTTTAAAAACTTCAATCCTaaaaaaaaaaaaaaaaaaaaaaaaaaCTATACACAAACCACTGATTTGCCCAGACCaaaaaaagaaagaaagaaagaaa i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89568411 3268 - 91010382 I e papAnu2.chr6 75056 438 + 174439528 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-1299.000000 s hg38.chr3_KI270935v1_alt 20361 34 + 197351 agaaagaaagaaagaaagaaagaaagaaagaaag s ponAbe2.chr3 199671826 1 + 202140232 A--------------------------------- i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89568411 3268 - 91010382 I e papAnu2.chr6 75056 438 + 174439528 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3 649099 582 - 202329955 I a score=502906.000000 s hg38.chr3_KI270935v1_alt 20395 1980 + 197351 aaagaaagaaagaaagaaagaaagaaagaaagaaaAAGAAATCAGCGGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATAAAGTACTTTATTTTACAACCTGCTTTTCTTATAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATACAGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAGTCTTGTTCCAGTGGTTCATCGGTGACTTCTGTGGCTTCGTCATCATTATCCATGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGGTTTTTTCTTTCTGGGACCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATATTCAAAATACCTCCACAGTTAAGTTTCGTGAATTCTGATGTTCTGTAGTTCAAATCACATCCCCTGAAATTCAGCAGCAACTGCATACAGGTGGGAGAAAAGCCCAGCGTCGACATTACAAGGAGTTCCATGATGTACAATTCTTTCACAAAAACAATGAATGCAAGAATTTGAGGATCTCCTTACTCCTCCCTTTTACAGATGGT--CTCTCAATCCcttcttcttcctcttcatcttc------atcttcttctGAACGCGCTGCCGGGTACCATGGCTTTTTTTGTCTTTATCATGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAGTCGCTTGACTGGCTATTTCTCCGACTTCGCCTTTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTCTCAAAGGGCTCACTGAGGAAACTTCTGATTCAGATGTCGAAGAGTCACTG--AGTTTTCTCTTCATTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCCACCCATTTGTTGTCATGGGGGCTGACAGAGAAACCTTTGGTCGATTACGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATCACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTCTGAGAAATTTGTCTGTTCCTGTATAGTTTCTCCTCGGATCTGTTAACAATTCACATAATCGCTGAATAGTAAAAGGGATACGGTTAAATCCAGTGACAGTTTTTCAGTATTCTTCCCTTTGTTTCATCACAGGGAATATATTCGACATTAGGGTTGGGAGGACCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACGGAATCTGTTTCTCCAGTCTTGGCTACATGACAAAAGGAACTGATCCAGGACAGGACAGACTTTCTTTTTTGCC-TCTTCTCAAAATCTTCCAGCGCCTCCTGGAGCCTGTCGACGTCCATGGCTTCCCGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTGGGGACCGGAACGCCTCCCCCCACCCCCCGACGTCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCC-GGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCT-CCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACATCACCC s panTro4.chr3 649681 1982 - 202329955 aaagaaagaaagaaagaaagaaaga--gaaagaaagagaaaTCAGCGGTAAGGTAAGCAGGATCCAGAGGAGCTGATATTCACAGTTCTTACATGGACAACTCTTTCAGGAATTATCCATAAAGTACTTTATTTTACAACCTGCTTTTCTTGTAAAACTAAAGGTGCACTTTTTTACATAAAAGTTTTATATGGTGTTAAAACCAGAACTGTGTGTAAAATACTGCATGTAAATGTTTCTAAATAATCTTGTTCCATTGGTTCACCGGTGACTTCTGTGGCTTTGTCATCATTTTCCACGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGGAATTGGATCCTACTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCGTTTTCACTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCAGATTCCTCCATTTCATTATTTTCCTCAGAAGTCTCTTCATTCACAGTTGAGGCATCATCAGATTCTTTTTCTTGGTTTTTTCTTTCTGGGATCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAAATTTTATTTTCAAAATACCTCCACAGTTAAGTTTCATGAATTCTGATGTTCTGTAGTTCAAATCACATCCCCTGAAATTCAGCAGCAACTGCATACAGGTGGGAGAAAAGCCCAGCGTCGGCATTACAAGGAGTTCCATGATGTACAGTTCTTTCACGAAAACAATGAATGCAAGAATTTGAGGATCTCCTTACTCCTCCCTTTTACAGATGGT--CTCTCAATCCcttcttcttcctcttcatcttc---ttcatcctcttctGAATGCGCTGCCGGGTGCCACGGCTTTCTTTGTCTTTATCCTGAGATGAAGGTGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAGTCGCTTGACTGGCTGTTTCTCCAACTTTGCCTTTTT-GTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTCTCAAAGGGTTCACTGAGGAAACTTCTGATTCAGATGTCGAAGAGTCACTGTGAGTTTTCTCTTCATTTTGCTGCAAATTTGCCTCTTTGCTGTCTGTGCTCTCAGGCGACCCTTTTGTTGTCATGGGGGCTGACAAAGAAACCTTTGGTCGATTAAGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATAACACCATTCATTCGATTTAAACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTGTGAGAAATTTGTCTGTTCCTGTATAGTTTCTCCTTGGATCTGTTAACAATTCACATAGTCGCTGAATAGTAAAAGGGATACGGTTAAATCCAGTGACAGTTTT-CAGTATTCTTTCCTTTGTTTCATCAAAGGGAATATATTCGACATTAGGGTTGGGAGGACCTCTTGGCGCAGGAGCTGAAGTTCTGAAATCATCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACGGAATCTGTTTCTCCGGTCTTGGCTACATGACAAA-GAAACTGATCCAGGACAGGACAGACTTTCTTTTTCCCCCTCTTCTCAAAATCTTCCAGCGCCTCCTGGAGCCTCTCGACGTCCATGGCTTCCCGGAGTCCCTCACAGCCTCCGCCTCCCTCCGCGGGTCTCTTGGGGACCGGAACGCCTCCCCCCACCCCCTGACATCCTCCCACTCCCTCGCACACCCTCCAGCACGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCCAGGGGAAGCGTGTGAGAGAGTGAGACCGACAGAGTGAGCACCT-CCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACGTCACCC i panTro4.chr3 I 582 C 0 s ponAbe2.chr3 199671827 1950 + 202140232 ----------------------------------------ATCAGTGGTAAGGTAAGCAGGACCCAGAGGAGCTGATATTCACAGTTCTTACATGTACAACTCTTTCAGGAATTATTCATAAAGTACTTTATTTTACAACCTGCTTGTCTTGTAAAACGGAAGGTCTACTTTTGTACATAAAAGTTTTATACGGTATTAAAACCAGAACTGTATGTAAAATACTGCATCTAAATGTTTCTACATAACCTTGTTCCATTGGTTCATCGGTGACTTCTGCGGCTTCATCATCATTTTCTATGGATGATTCTGAAAGAATCTCTCCAGTTTTACTGTAATTGGATCCTGCTAATTCTTCTGTTTCACGGCAGTCAGAAGAACCACTACTTTCAGGGCCTTCATTTTCATTACCTTCAGAATGTAGTAAATCTTTCTCAGCTTGAGACACATCACATTCCTCCATCTGATTATTTTCCTCAGAAGTCTCTTCATTCATAGTTGAGGCATCATCAGATTCTTTTTCTTGATTTTTTCTTTCTGGGATCATTTCTCTTGATGTCATAAAAGACTCTAAAAATAAGCAAATGTTGTTGTACTTAATTTTTATTTTGAAAATTCCTCCACAGTTAAGTTTGATGAATTCGGATGTTCTATAGTTCAAATCACATCCCCTGAAATTCAGCGGCAGCTACATACAGGTGGGAGAGAAGCCCAGCGTCGGCATTACAAGGAGTTCCGTGATGTACAATTCTTTCATGAAAACAATGAATGCAAGAATTTGAGGATCTCCTTACTCCTCCCTTTTACGGATGGTCCCTCTCAATACcttcttcttcctcttcgtcctcttcttcatcctcttctGTACACGCTGCTGGATACAACGGCTTTCTTTATCTTTATCCTGAGATGAAGATGATGCTTCTGTTTCTTCTACCATAACTGAAGAAATTTCGCTGCAAATCGTTTGACTGGCTGTTTCTCTGACTTCGTCTTTTTTGTCAAACCTGAGTCTTTTTACCTCATGCCCCTCAGCTTCCACAGCATCTTCATCTGGATGTTTATTTTTCAAAGGGCTCACTAAGGAGACTTCTGATTCAGATGTCAAAGAGTCACTGTGATTTTTCTCTTCATTTTGCTGCATATGTGCCTCTTTGCTGTCTGTGCTCTCAGGCAACCCATTTGTTGTCATGGGGGCTGACAAAGAAACCTTTGGTCGATTAAGTGGCCTGGGTGTCCCAGGCCCATTTATATTAGACCTCTCAGTATAGCTTGGTGCATTTCCAGGAAACATAACACCATTCATTCGATTTATACTATTGGAATTGTTTTTCTCTGAAGAAGGATAAACACAGCTAACAACCATCACGTTCTTTTCTACTCCTCTGAGAAATTTGTCTGTTCCTGTATAGTTTCTCCTTGGATCTCTTAACAATTCCCATAGTCGCTGAATAGTAAAAGGGATACCGTTAAATCCAGTGACAATTTT-CAGTATTCTTTCCTTTGTTTCATCAAAGGGAATATATTCCACATTAGGGTTGGGAGGACCTCTTGGCTCAGGAGCTGAAGTTCTGAAATCGTCCATCACTTTCTCCAGTTTGAAAATAAAATAGCCTTTAAATTGGGACCACTGAATCTGTTTCTCCAGTCTTGGCTACATGACAAA-GAAACCGATCCAGGACAGGACAAACTTTCTTTTTCCCCCTCTTCTCAAAGTCTTCCAGTGCCTCCTGGAGCCTGTCAACGTCTATGGCTTCCTGGAGTCCCTCACAGCCTCCGCCTCCCTCTGCGGGTCTCTTGGGGACCGGAACTCTTCCCCCCACCCCCCCACGTCCTCCCACTCCCTCGCACACACTCCAGCTCGCAGGCCAAGTGGGGTGGGGGGGAACGAAGGGAGCC-AGGGAAACGTGTGAGAGAGGGAGACCGACAGAGCGAGCACCTCCCCCAAGCCGCTACCACCAGCCCTCCAACATGGCGCCTGGCACGTCACCC i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 41963624 7606 + 159171411 T e chlSab2.chr4 89568411 3268 - 91010382 I e papAnu2.chr6 75056 438 + 174439528 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=753303.000000 s hg38.chr3_KI270935v1_alt 22375 703 + 197351 TAAAAAGTCATTTCTTGGAGAAGCGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTTCTATTCTGTGAGTTCTGGCAATTGTGTCCGTTCACCCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTAGGATG-GTGTGGCCTCTGATCTGTGACC-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAA---------GCTCATGGATGTTCCTTCCTGATGTTCATCTGCCACCATGCTATTGAATGCATCTTGTttataactgtcttctaaatattgaatagaaataaagcgtttttacagtatgggtaaggtataaagaatattgacacattggacacagaggacctccaccaagtttagggagtagaatctgaagagacatagctttggatgc-tccctggaggccctgcctgagtcccagtcccttcccttctcctacggagggaatcacttcctgctttagtctttattatttgcacactttccttcatagtatgtttctttcaccg--tgtgtgtacatccct-aaaagatatgccatttagtttttgaactttctgttttctttttgaggcaggg-tcttgctctgttgcct s panTro4.chr3 651663 703 - 202329955 TAAAAAGTTATTTCTTGGAGAAGCTATGGATGACAGAGATTAATCTGAGAGTTACTATTAACGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTTCTATTCTGTGAGTTCTGGCAATTGAGTCCATTCACTCAGCCTGGTGATGCAGCAGGTGTCACAGAAGGACCCTGTCCCAGCTGGTCCTGCTCCACTGCTAGGATG-GTGTGGCCTCTGATCTGTGACC-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAA---------GCTCATGAATGTTCCTTCCTGATGTTCATCTGCCACCTTGCTATTGAATGCATCTTGTTTATAACTGCCTTCTACATATTGAatagaaataaagcatttgtacagtatgggtaaggtataaagaatattgacacattggacacagaggacctgcaccaagtttagggagtagaatctgaagagacataactttggatgc-tccctggaggccctgcctgagtcccagtcccttcccttctcctacggagggaatcacttcctgctttcgtctttattatttgcacactttccttcatagtacgtttctttcaccg--tgtgtgtacatccct-aaaaaataagccatttagttttTGAACtttctgttttctttttgaggcaggg-tcttgctctgttgcct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199673777 704 + 202140232 TAAAAAGTTATTTCTTGGAGAAGTGATGGATGACAGAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTTGGTGCTGATACTGCTATTCTGTGAGTTCTGGCAATTGAGTCCATTCCCACAGCCTGGTGATGCAGCAGGTGTCACAGAAGAACCCTGTCCCAGCTGGTCCTGCTCCACTGCTATGATG-GTGTGGCCTCTGATCTGTGACC-----GTGTCTTGAGGGGAGACCAGGCCCTTGATCACAAGCGTATCCATGGTGAGGTTCCGTGGATGGAA---------GCTCATGGATGTTCCTTCCTGATGTTCATCTGCCACCTTGCTATTTAATGCATCTTGTTTATAACTGTCTTCCaaatattgaatagaaataaagcatttgtacagtatgggtaaggtataaagaatattgacacattggacacagtggacctccaccaggtttagggagcagaatctcaagagacataactttggatgc-tccctggaggccctgcctgagtcccagtcccttcccttctcctacggagggaatcgcttcctgctttagtctttattattcctacactttccctgatagtatgtttctttcaccg--tacgtttacatccctgaaaaaatatgccatttcattttggaactgtgt-ttttgTTTTTGAGACAGGGTTCTTCCTCTGTTGCCT i ponAbe2.chr3 C 0 I 1157 s papAnu2.chr6 75494 692 + 174439528 taaaaagttatttcttgGAGAAGCGATGGATGACAAAGATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCATGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGCGGCCTCTGCTCT-----------GTGTCGTGAGGGGAGACCAGGCCTTTTATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAA---------CCTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCTATTTAATGCATCTTGTTTATAATTGTCTTCTAAATATTGAATAGAAATAAAGCATTGGTACAATATgggtaaaatataaagaatatcaACACATTGGACACAGAGGACCTCCACCAAGTTTAGGGAATAGAATCTGAAGAGACATAACTTCAGATGT-TCCCTGGAGGCCCTGCCTGAGTCCcagtcccttcccttctcctacAGAGGGAATCACTTCCTGCTTTAATCTTTATTGTTCCCGTACTTTTCTTCACAGTACGTTTCTTTCACCGCATATGTGTACATCCC----AAAATATGCCATTTAGTTTTtgaactttctgttttctttttgaggcaggg-tcttgctctgttgcct i papAnu2.chr6 I 438 C 0 s chlSab2.chr4 89571679 690 - 91010382 TAAAAAGTTATTTCTTGGAGAAGCGATGGATGACAGACATTAATCTGAGAGTTACTATTAATGGAGAAACTTAGAACTTACCATTTTTCCTGTGAGGTTTCGGTGCTGATACTGATACTCTGTGAGTTCTGGCCGCTGAGTCCGTTTGCACAGCCTGGCGATGCAGCAGGT-TCACAGAAGGGCCCTGTCCCAGCTGCTCCTGCTCCA---CTATGATG-GTGCGGCCTCTGCTCT-----------GTGTTGTGAGGGGAGACCAGGCCTTTGATCACAAGCGTATCCATGGTGAGGTTCTGTGGATGGAA---------CCTCATGGATGTTCCTTCCTGATGTTCATCGGCCATCTTGCCATTTAATGCATCTTGTTTATAACTGTCTTCTaaatattgaatagaaataaagcattggtacaatatgggtaaaatataaagaatatcgacacattggacacagaggacctccaccaagtttagggaatagaatctgaagagacataacttcagatat-tccctggaggccctgcctgagtcccagtcccttcccttctcctacagagggaatcacttcctgctttaatctttattgttcccgtacttttcttcacagtatgtttctttcaccgcgtatgtgtacatccc--aaaaaatatgccatttagttttTGAA----CTAttttctttttgaggcaggg-tcttgctctgttgcct i chlSab2.chr4 I 3268 C 0 s calJac3.chr5 41956018 692 + 159171411 TAAAACGTTGTTTCATGGAGAAGTGATGGAGGACAGAGATTAATCTGAGAGTTG-TATTGATGGAGAAACTGAGAACTTACCA--TTTCCCGTGAGGTTTCGGTGTGG--AATGATACTCTGTGCGTTCTGGCAGCTGAGTCCGTTCACACAGCCTGGTGATGCAGTAGGTGTTACAGAAGGGCC-TCTCCCAGCTGGTCCTGCCTCTCTGCTGTGATGAGTGCTGCCTCTGATCCCCGACCACTGACTGTCTTGAGAGGAGACCAGGCCTATGAGCACAAGGGTGTCCATGGTGAGGTTCCATGGATGGAGCACAGGGACGCTCCTG-ATGTGCCTTCCT-ATGCTCATCCGCCATCTTGCAATT-AATGCATCTTGTTTATAACTGTCTTCTAAAGACTGGGTAGAaa-aaagcatttgtaccatatgggtcagggataaagaat-------------aagcataggacctctaccaagtttagggaataaaaac-aaagagacagaactttggatgcttccctggaggcccctcctgagtcccagtcccttccctt---ctacagagggagtcactttctg-tttagcctttcttattcctgtacttttctttatagtttatttctttcaccatctacatgtttatccct-aaacaatatgccatttagtttttgaagtttct-gtgtctttttgagacaggg-tcttgctctgctgctg i calJac3.chr5 T 7606 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=114845.000000 s hg38.chr3_KI270935v1_alt 23078 147 + 197351 cggctgtagttttgaactttgacgtgagggaattctcctgcgtggctgctcctgcactgca-tggctctgagcacctgctctgtgtctatttttgtcctccattctctccctgagacccacccacactgacatggctcattttcattg s panTro4.chr3 652366 147 - 202329955 cggctgtagttttgaacttTGACGTGAGGAAATTCTCCTGCGTGGCTGCTCCTGCACTGCA-TGGCTCTGAGCATCTGCTCTGTGTctatttttgtcctccattctctccctgagacccacccacactgacatggctcattttcattg i panTro4.chr3 C 0 C 0 s papAnu2.chr6 76186 145 + 174439528 cgGCTGTAGTTTTGAACTTTGATGTGAGGAAATTCTCCTGTGTGGCTGCTCCTACGCTGCA-TGGCTCTGAGCATCTGCTCAAtgtctgtttttgtcttccattCTCCCCCTGAGACCCACCCACACTGATGTGGTTCATTTTCAT-- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89572369 147 - 91010382 cggctgtagtTTTGAACTTTGATGTGAGGAAATTCTCCTGTGTGGCTGCTCCTGCACTGCA-TGGCTCTAAGCATCTGCTCAATGTCTGTTTTTGTCTTCCATTCTCCCCCTGAGACCTACCCACACTGATGTGGTTCATTTTCATTG i chlSab2.chr4 C 0 I 1704 s calJac3.chr5 41956710 148 + 159171411 cggccatagttttgaactccgatgtggagaaattctcctgtgtggctgctcctaggctgcactgggtctgagcatctgctccatgtctattcttgtcctccattctcttcccgagacccatccacattgacgttattcattttcactg i calJac3.chr5 C 0 C 0 e ponAbe2.chr3 199674481 1157 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=6480.000000 s hg38.chr3_KI270935v1_alt 23225 17 + 197351 ctgcatggtctcccgtc s panTro4.chr3 652513 17 - 202329955 ctgcatggtctcccgtc i panTro4.chr3 C 0 C 0 s papAnu2.chr6 76331 16 + 174439528 -TGTGTGATCTCCCATC i papAnu2.chr6 C 0 I 1017 s calJac3.chr5 41956858 17 + 159171411 ctgcgtaatctcccatg i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89572516 1704 - 91010382 I e ponAbe2.chr3 199674481 1157 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=151298.000000 s hg38.chr3_KI270935v1_alt 23242 754 + 197351 gtctgaggggagcatgggaaatgtcttcatcttcccgtggatgagtgtttggccaggttggggcccttaggactgtgttttgttgggaacgttcttgggcatttcttttgtacacaagcgcaagtttcttctggtcagtagctttcaaattttaaaatttcatcccaggtaa-aaatgtaattttcctcataacccacaacacacacactttcatatacaagcatagcagaaata------------tacttcacaagcgttagcagtgcctg-gtgttcctgcttctctccattctccccaacgctggcatggattgggttgtggg--------atttttgcccgtctggtggttgtcacgtgatatctccccctgttaggctgagcccctcttcatgttttcattagccattcctccacatttcctcttctgtggagggccggttcagctcttttgcccagtttctgttaagttgtttgaatttttGCACTTTTCCTTTATTATTCCTATTACTATGtttttgagaca--atatcactctgccacccaggctggagtgcagtggcgcgatctcagctcactgcaacctccatcttctgggttcaaatgattctcctgcctcagcctcccaagtggctgggattacaggcacgcaccaccacgcccaactaatttttatatgtttactacagatggggtttcaccatgttgtccaggctggtctgaaactcctgacctcaggtgattctcccacctcagcctcccaaagtgctggga s panTro4.chr3 652530 759 - 202329955 gtctgaggggagcatgggaaatgtcttcatcttcccgtggatgagtgtttggccaggttggggcccttaggactgtgttttgttgggaacgttcttgggcatttcttttgtacacaagcgcaagtttcttctggtcagtagctttcaagttttaaaatttcatcccaggtaa-aaatgtaattttcctcataacccacaacacacactctttcatataccagcatagcagaaata------------tacttcacaagcattagcagtgcctg-gtgttcctgcttctctccattctccccaacgctggcatggattgggttgtggggttgtgggatttttgcccgtctggtgggtgtcacgtgatatctccccctgttaggctgagcccctcttcatgttttcattagccattcctccacatttcttcttctgtggagggccggttcagctcttttgcccagtttctgtt-----gtttgaatttttgcacttttcctttattattcctaTAACTATGtttttgagagagaatatcactctgtcacccaggctggagtgcagtggcgcaatctcagctcactgcaacctccatcttctgggttcaaatgattctcctgcctcagcctcccaagtggctgggattataggcacacaccaccacgcccagctaatttttatatgtttactacagatggggtttcaccatgttttccaggctggtctgaaactcctgacctcaggtgattctcccccctcagcctcccaaaatgctggga i panTro4.chr3 C 0 C 0 s calJac3.chr5 41956875 733 + 159171411 gtatgagggggacat-ggaagtgtcttcattttcctgttgatga-tgtttgtccaggttggggtccttaggactgtg--ttgct-agaatattctagggcattt-ttttgtacacaagtgccagtttcttttggtgagtagctttcactttttaaaatttcatcccaggtaagaaatgtgattttcctcata----acaacacacaccatttcatatgcaagtataacaaaaaaaatttgttatcagtgataaaaaatttttattagtggctgagtgttcttgttgctctccactctccccaacacttgcatttattgggctgtggg--------atttttgccagtctggtgggtgtcacgtgatacttcatcctgttaggctgaggccctcttcatgtttttattggtcttttcttcacatttcctcttctgtgaagggctggttcaactcttttgcccagattctgtttagttgtctgaatttttg--------ccttattattatta----------tttgagatggagttgccctctgtcacccaggctggagtacagtggtacgatcttggctcactgccacctccatcttccgggttcaagcgattctcctgccttagcttccagagttgctgggattaaaggcatgtgccaccatgtccagctattttttgtatgtttagtagagacgggatttcaccatgttgaccaggctg---------ccttgacctcaggtgacctgcctgccttggcttcccaaagtgcttgga i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89572516 1704 - 91010382 I e papAnu2.chr6 76347 1017 + 174439528 I e ponAbe2.chr3 199674481 1157 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=91086.000000 s hg38.chr3_KI270935v1_alt 23996 1008 + 197351 ttatgtgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaacaagaatagttataccagatatagatcttagatatgattatatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatccttgctctataatcgtagcctaggaaaaaccaggccatacagagataggagctgaggggacatagtgaggtgtgaccagaagacaagagtgcgagccttctgttatgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcgtctgggaagatgcctgttaccaggcggat--------------agcaaaaggtgtcaaggaacaacacccgatacttagcagaccgggaaagggcggggaggggggggggtctccctttccccgggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggctcgcctgcagttatccggaggcctaaccgtctccctgtgatgctgtgcttcagtggtcacgctcctagtccgccttcatgtttcatcctgtacacctggctctgccttctagatagcagtagtaaattagtaaaaatactaatagtccctgatatgcggaaataatggcataagctgtctttctctctgtctcctctccctctctgcctcggctgccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacctatcattgcaggtgactcacattctttaccctgccccttctgccttgtatccaataaataacagcgcagccagacattcggggcactaccgttctccgcgcattggtggtagtggccccccgggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtggggctggtccctgc s panTro4.chr3 653289 1016 - 202329955 ttatgcgggtggcaagccacccaggcaccgaggcaagagacagaggacacgagctgttccagtataataaaatataaaacaagaatagttatgccagatatagatcttagatatgattatatatgaatatcattaatcattagtttgtagcaattactttttattccaatattatgataatcctcgctctataatcatagcctaggagaaaccaggccatacagagataggagctgaggggacatagtgaggtgtgaccagaagacaagagtgcgagccttctgttatgcccggaccgggccaccagagggctccttggtctagcggtgatgccagcgtctgggaagacgcccgttaccaggcagatcgtggtccagcggtagcaaaaggtgtcaaggaacaacacccaatacttagcagactgggaaagggtgggg------gggtgtctttctttccccaggggagtttagagaagactctgctcctccacctcttgtggagggcctgacatcagtcaggctcacctgcagttatctggaggcctaaccgtctccctgtgatgctgtgcttcagtggtcacactcctagtccgccttcatgtttcatcctgtacacctggctctgccttctagatagcagtagtaaattagtaaaaatactaatagtccctgatatgcggaaataatggcataagctgtctttctctctgtctcctctccctctctgcctcggctgccaggcagggaagggccccctgtccagtggacatgtgacccacgtgaccttacctatcattggaggtgactcacattctttaccctgccccttctgccttgtatccaataaataacagcgcagcgagacattcggggcactaccggtctccgcgcattggtggtagtggtcccccgggcccagctgccctttctcttatctctttgtcttgtgtctttatttctacactctctcgtcgccgcacacagggagagacccaccgaccctgtggggctggtccctgc i panTro4.chr3 C 0 C 0 e calJac3.chr5 41957608 0 + 159171411 C e chlSab2.chr4 89572516 1704 - 91010382 I e papAnu2.chr6 76347 1017 + 174439528 I e ponAbe2.chr3 199674481 1157 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=273.000000 s hg38.chr3_KI270935v1_alt 25004 1 + 197351 a s panTro4.chr3 654305 1 - 202329955 a i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199675638 1 + 202140232 a i ponAbe2.chr3 I 1157 C 0 e calJac3.chr5 41957608 0 + 159171411 C e chlSab2.chr4 89572516 1704 - 91010382 I e papAnu2.chr6 76347 1017 + 174439528 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1267.000000 s hg38.chr3_KI270935v1_alt 25005 3 + 197351 GGG s panTro4.chr3 654306 3 - 202329955 GGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199675639 3 + 202140232 gga i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 77364 3 + 174439528 gga i papAnu2.chr6 I 1017 C 0 e calJac3.chr5 41957608 0 + 159171411 C e chlSab2.chr4 89572516 1704 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=6165.000000 s hg38.chr3_KI270935v1_alt 25008 9 + 197351 TTATAGGCA s panTro4.chr3 654309 9 - 202329955 TTATAGGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199675642 9 + 202140232 ttataggca i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 77367 9 + 174439528 ttacaagca i papAnu2.chr6 C 0 C 0 s calJac3.chr5 41957608 9 + 159171411 ttacagata i calJac3.chr5 C 0 C 0 e chlSab2.chr4 89572516 1704 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=607977.000000 s hg38.chr3_KI270935v1_alt 25017 511 + 197351 TGAGCCACCA---TGCCCGGCCTGCTTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCTATTCATTCCGGTGACTATATGTGGGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCCGGATCTCCTCT--CTGATGGAAGAAgagac----agggatagaagggtgcagagaatcagagccaagaggaggccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttctctgagtctggtgggattagcaggggatttaaa-cagaggaaccgtgggatctcccttatgcattTCTGCCATGGTTGGCTCAGCTGAACACACCTCTTGAGCAAGACTTGGTCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGTCTCCCACACGGCTGGGCGGCCCCGAGACCTGCTGTGCGTGCCCTTCTCATTGGTGGCATTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT s panTro4.chr3 654318 511 - 202329955 TGAGCCACCA---TGCCCAGCCTGCTTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCGATTCATTCCGGTGACTATATGTGGGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCCGGATCTCCTCT--CAGATGGAAGAAgagac----agggatagaagggtacagagaatcagagccaagaggaggccgagtcaggcgggggttgcaggctgctgtgaggacttggctgcttttctgagactggtgggattagcaggggatttaaa-cagaggaaccatgggatctcccttatgcattTCTGCCATGGTTGGCTCAGCTGAACGCACCTCTTGAGCAAGACTTGGTCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCGTGGCCACTGACACATCCACGTTTGGCTCCCACACGGCTGGGCGGCCCCGAGACCTGCTGTGCCTGCCCTTCTCATTGGTGGCATTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199675651 513 + 202140232 tgagccacca---tgcccggcGTGCCTTTTTCTTTTTCAAAAGGACTCTTTCTAGATTATACCTATTCATTCCGGTGACTATATGTGTGGCAAAGATGGGTTTGAATCCACCAGGATAAACGTGCTGGATCTCCTCT--Ctgatgggagaagagacagagagggatagaagggtgcagagaatcagagccaggaggaggccgagtcaggcgggggttgcaggctgctgtgaggacttggctccttctctgagttgggtgggattagcaggggatttgaa-cagaggaaccgtgggatctcccttatgCATTTCTGCCATGGTTGGCTCAGCTGAATGCACCTCTTGAACAAGACTTGGCCTTGGACACCCAGAGGCCCTTGGTTGAGGGTTTACCTCCTGGCATGGCCACTGACACATCCACGTTTGGCTCCCACACGGCTTGGCGGCCCCAAGACCTGCTCTGCCTGGGCTTCTCATTGGTGGCATTTCTCAAGTTTGTCCC--CTCAAGTCTGCCCCAT i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 77376 515 + 174439528 tgagccacca---tgtccagcctgcctttttctttttcaaaaggaCTCTTTATAGATTATACCTATTCATTCCGGTGACTATCTGTGTGGCAAGCATGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGcagaagagacagaaagggataggaggggagagagaatcaGAGCCAagaggaggctgagtcaggcgggGGTTGCAGGCTGCTGTGAGGACTTGGCTGCTTCTCTGAGTCGGGTGGGATTCGCAGGGGATTTAAA-CAGAGGAACCATGGGATTTCCCCTGTGCATTTCTGCCATGGTTGGCTCAGCTGAACACACCTCTGGAACAAGACTTGGCCTTGGACACCCAGAGGCCCTTGGGTGAGGGTTTACCTCCTGGCATGGCCACTGACACATCCACGTTTGGCGCCCACACGACTGGGCGGCCCCAAGACCTGCTCTGCCTGGGCTTCCCCTTGGTGGCATTTCTCAAGTTTGTCCCCTCTCAAGTCTGCCCCAt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89574220 515 - 91010382 tgagccacca---tgtccagcctgcctttttctttttcaaaaggactctttatagattaTACCTATTCATTCCGGTGACTATCTGTGTGGCAAACATGGGTTTGAATCCACCAGGATGAACATGGAGGATCTCCTCT--CTGGTGGCAGAAgagacagaaagggataggaggggagggagaatcagagccaagaggaggctgagtcaggtgggtgttgcaggctgctgtgaggacttggctgcttctctgagtcgggtgggattagcaggggatttaaa-cagaggaACCGTGGGATTTCCCCTGTGCATTTCTGCCATTGTTGGCTCAGCTGAACACACCTCTTGAACAAGACTTGGCCTTGGACACCCAGAGGCCCTTGGGTGAGGGTTTACCTCCTGACCTGGCCACTGACACATCCACGTTTGGCGCCCACACGACTGGGCGGCCCCAAGACCTGCTCTGCCTGGGCTTCCCCTTGGTGGCATTTCTCACGTTTGTCCCCTCTCAAGTCTGCCCCAT i chlSab2.chr4 I 1704 C 0 s calJac3.chr5 41957617 521 + 159171411 tgagccaccaccgtgcctggcctgcctttttctttttcaagaggactctttatagatGATGCCCATTCATTTTAGTGACTATCTGTGTGGCAAAGATGGGTTTGAATCCACTAGAATGAACCTTCAGGATCTCCTCTgcgtggtgggagaagagacagagaggggtagatgggcatggagaatcagaggcgagaggaggccgagtcaggcgggggtcgcaggcagccgtgaggacttggctcctcctctgagccaggtgggattagcaggggattttaatcagagcagccatggggtctccctcgtgtattTCTGCTATGGTTGGCTCAGCTGAACTCACCTCTTCAACAAGACTTGGCCTTGTCCATCCAGAGGCCCGTGGCGGAGGGCTTAACTCCTGGCATGGCCACTGACACATCCACGTTTGGCGCACACATGGCTGGGCAGCCCCAAGACCGGCTCTGCCTGGGCCTCTCGTTGGCAGCATTTCTGGCGTTTGTCCCTTCCCAAGTCTGGCCTAT i calJac3.chr5 C 0 n 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=49691.000000 s hg38.chr3_KI270935v1_alt 25528 65 + 197351 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCCTCCTGACTCACA s panTro4.chr3 654829 65 - 202329955 CCGGAAAACCAAACACCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCCTCCTGACTCACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199676164 65 + 202140232 CCGGAAAACCAAACGCCTCTCTCTCCTACATGGAAACCCCCGTCAGCACCTCGTCCTGACTCACA i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 77891 61 + 174439528 ccggaaaaccaaacacctctcTCTCCTACATGGAAACCCCCGTCAGAACCT---CCCGACTCAC- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89574735 62 - 91010382 CCAGAAAACCAAACACCTCTCTCTCCTACATGGAAA-CCCCGTCAGAACCTC--CCCGACTCACA i chlSab2.chr4 C 0 I 131 e calJac3.chr5 41958138 0 + 159171411 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=300.000000 s hg38.chr3_KI270935v1_alt 25593 1 + 197351 G s panTro4.chr3 654894 1 - 202329955 G i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199676229 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e chlSab2.chr4 89574797 131 - 91010382 I e papAnu2.chr6 77952 0 + 174439528 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=408614.000000 s hg38.chr3_KI270935v1_alt 25594 607 + 197351 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACATGGAGAAGCTCATGGGACCCC-CGATGGACCAGGACAGTGCCAGCACTAAGACGTGCCCTGAAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAACAGCACGGGGCACTGGGAGCTGCAAACGCCCACGATACTGTGAGAGACGGAGAAAGGTATGACAGGAGGAGCAGACCAAGAAGACGGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCACGATACCGTGAGAGATGGAGAAAGGTATGGCCATGGCGGTCacaaaatgttcctcaacatttattaaaggcctaaatggagaacataacgctatcaaacccttagctaaaaacacaggggaaaattcgtatggcctggggttaggcgaaaagttcttagacatgacaccaaaagcatgattcataa--gattgacaaattaaatttagtcataaatttaaaattataattctataaagcaatataaaaatccaaagagaatgaaacatgaactatggtctagaaataaacatttgtgaatcacacgtctcacaacctactggcacgcaggatatatgaagaaccatcaaaactta s panTro4.chr3 654895 609 - 202329955 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACACGGACAAGCTCATGGGACCCC-CGATGGACCAGGACAGCGCCAGCACTAAGACGTGCCCTGGAACTCACAGGAAGAGCGGACCAAGAAGCCGGGAACAGCACGGGGCACTGGGAGCTGCAAACGCCCATGATACTGTGAAAGATGGAGAAAGGTATGACAGGAGGAGCGGACCAAGAAGACGGGAACAGCACGGCGCACTGGGAGCTGCAAATGCCCACGATACCGTGAGAGATGGAGAAAGGTATGGCCATGGCGGacacaaaatgttactcaacatttattaaaggcctaaatggagaacataacgctatcaaacccttaggtaaaaacacaggggaaaatttgtatggcctggggttaggcgaaaagttcttagacatgacaccaaaagcatgattcataaaagattgacaaattaaatgtagtcataaatttaaaattataattctataaagcaatataaaaatctaaagagaatgaaacacaaactatggtctagaaaaaaatatttgtgaatcacacatctcacaacgtactggcacgcagaatatatgaagaaccatcaaaactta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199676230 518 + 202140232 GGCATCCCGTCAACATCACAGTCCCAACCTTCCCACACGGACAAGCTCATGGGACCCCGTGATGGACCAGGACAGCGCCAGCACTAAGACGTGCCCTGAAACTCACAGGAAGAGCGGACCAAGAAGACGGGAACAGCACGGGGCACTGCGAACTGCAAACGCCCACGATACT------------------------------------------------------------------------------------------GTGAGAGATGGAGAAAGGTACGGCcatagctgacacaaaatgttactcaacatttattaaaggcctaaatggagaacataacgctatcaaacccttaggtaaaaacac--gggaaaatttgtatggcctggggttaaatgaaaagttcttagacatgacaccaaaagcatgattcataaaagattgacaaattcaatttagtcataaatttaaaattataattctataaagcaatataaaaatctaaagagaatgaaacacaaattattgtttagaaaaaaacaattgcgaatcacacatttcagaaagtagtggcacgcagaatataagaagaaccatcaaaactta i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 77952 518 + 174439528 GGCATCCCGTCAACATCACAGTCCCGACTTCCCCACAC-GACAAGCCCATGGGACCCCCTGATGGACCAGGACAGCGTCAGCACTAAGACACGCCCTGAAACTCACAGAAAGAGCGGACCAAGACGACGGGAACTGCACAGGGCACTGAGAGCTGCAGACACCCAAGATACT------------------------------------------------------------------------------------------GTCAGAGACGGAAAAAGGTATGGCCGTGGCTGACACAAAATGTTACTCAACATTTATCACAGGCCTAAATGGAGAACATAACACTATAAAACCATTAGAtaaaaacacaggggaaaattTGTATGGCCTGGGGTTAGGTGAAAagttcttagacatgacaccaaagGCATGATTCATAGAAGATTGACaaattaaatttagtcat-aatttaaaattataattctataaagcaatataaaaatcttaaaagaatgaaatgcaAACTATGggctagaaaaaaatattggttAATCACACATCTCACAATGTACTGGCACGCAGAATATACGAAGAACCGTCAAAACTTA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89574928 519 - 91010382 GGCATCCCGTCAACATCACAGTCCCGACTTTCCCGCACGGAGAAGCCCATGGGACCCCCTGATGGACCAGGACAGCGTCAGCACTAAGACACGCCCTGAAACTCACAGAAAGAGCGGACCAAGAAGACGGGAACTGCACGGGGCACTGAGAGCTGCAAACACCCAAGATACT------------------------------------------------------------------------------------------GTCAGAGACGGAAAAAGGTATGGCCGTGGctgacacaaaatgttactcaacatttatcacaggcctaaatggagaacataacactataaaaccattagataaaaacacaggggaaaatttgtatggcctggggttaggtgaaaagttcttagacatgacaccaaaggcatgattcatagaagattgacaaattaaatttagtcat-aatttaaaattataattctataaagcaatataaaaatcttaaaagaatgaaatgcaaactatgggctagaaaaaaatattggttaatcacacatctcacaatgtactggcacgcagaatatacgaagaaccgtcaaaactta i chlSab2.chr4 I 131 I 16 e calJac3.chr5 41958138 0 + 159171411 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=37949.000000 s hg38.chr3_KI270935v1_alt 26201 85 + 197351 accataagaaagtaaaaaccccagtattaaagagagggccaatattggaacggaggcctcatcaaagaaggtataaggagggcat s panTro4.chr3 655504 85 - 202329955 accataagaaagtaaaaaccccagtattaaagagagggcaaatatttgaatggaggcctcatcaaagaaggtataaggagggcat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199676748 84 + 202140232 actataagaaattaaaaaccccagtcttaaagagagggcaaatatc-gaaaggagtcttcatcaaagtacgtaaaaggagggcaT i ponAbe2.chr3 C 0 M 917 s papAnu2.chr6 78470 85 + 174439528 ACCATAAGAAAGTAAAAACCCCAGTATTAAAGAGAAGGCAAATATTTTAATGGAGCCCTCATCAAGGAAGGTATAAGGAGGGCAT i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e chlSab2.chr4 89575447 16 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=242819.000000 s hg38.chr3_KI270935v1_alt 26286 1007 + 197351 attgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcagcagtacctctgcaaatccattaaaatggctaaaaacagacaaaacccatgggccaacccaggttctagtgatgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtcctggagtttcttacgaagttaagcacatccttaccatgtcatccagcaaccccactgctgaaatgtcccccaagggaaaacttaaacgtgcacacacaaacctgcacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccgtcggcaggagcaggagaaggcgtgaactaacgcggatgcttccacacagggggcaccaaccagcagtggaaagatgcaccc-aaatgccccaggtctcccaggctacatgcccgttgaaggaagctagtttcggtgggcacaggccaaaggatgccaacacatgacatcttggagaagacagtg-taccgtgtcggggagcagggcagtggtttcgaggggctacgggtggagggGCGAATGGAGGAGCTCTCTGGGGCGATGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCTGGTACGGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGCTCCCACAACTCAGAGACAGAGGGTGTCGCCTCCATGAAACAAAAACATATTTTAAAAAAAAACCTCTTAAAATTAAGAAAAAAACCACAAAAAGTATTTCATAAGCGCATT-GACTTTGAGTTGACACAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGAGGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTTAAAAAGCAGCAGGGTGGAAATAATTTCTGCTGATGAGGTTGCATCTCT s panTro4.chr3 655589 1004 - 202329955 attgcccgagaaagaggctcaacatcatagagatgctggagaaatgccagtcagcagtacctctacaaatctattaaaatggctaaaaacagacaagaaccatgggccgacccaggttctagtgatgatgcagaggaactgggaccctcataagctgcagtgggaatgggaggggtcccgccatgctggaaagtggtccgggagtttcttacgaagttaagcacatccttaccatgtcatccagcaaccccactcctgaaacgtcccccaagcgaaaacttaaacgtgcacacacaatcctgtacacaagtgtttaggcctcattcctcattgccaataactggaagaaaacaaaatgtccatcggcaggagctggagaaggtgtgaaccaacgcggatgcttccacataggggacaccaaccagcagtggaaagatgcaccc-aaatgcgccaggtctcccaggctacatgcccggtgaaggaagctagtttcggtgggcacaggccaaaggatgccaacacatgacatcttggagaagacagtg-taccgtgtcggggagcagggcagtggtttcgaggggttacaggtggagggGCGAATGGAGGAGCTCTCTGGGGCGATGGCGTGAGCACCTGCACCTCACTGTGGGCTGCTGCGGCTGAGGGGCTG-TACAGCAAACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGCTCCCACAACTCAGAGACAGAGGGTGTCGCCTCCATGAAACAAAAACATATTTTAAAAAAAAACCTCTTAAAATTAAGAAAAAA-CCACAAAAAGTATTTCATAAGCACATT-GACTTTGAGTTGACATAATCTACCTGGGAGCATGGAACTGAAACCACAGGCTTGGCAATCCCGGAGGGAGAGGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAAC--ATTTAAAAAGCAGCAGG-TGGAAATAATTTCTGCTGATGAGGTTGCATCTCA i panTro4.chr3 C 0 C 0 s papAnu2.chr6 78555 982 + 174439528 ATTGCCCGAGAAAGAGGCTCAACATCATAGAGATGCTGGAGAAATGCCAGTCAACAGTACCTCTGCAAAtctattaaaatggctaaaaacagacaaaaaccacgGGCCAACCCAGCTTCTAGTGACGATGCAGAGGAATCGGGACCCTCATAAGCGGCAGTGGGAATGGGAGGGATCCCGCCATGCTGGAACGTGGTCCGGGAGTTTCTTATTGAGTTAAGCACATCCTTACCACGTcatccagcaaccccactcctGAAATTTCCCCCAAGAGAAAACTTAAATGTGCACACACAAACCTGCACTCAAGTGTTTAGGCCTCATTGCTCATTGCCAATaactggaagaaaacaaattgtCCATCGGCA------GGAGAAGGCATGAACCAGCGCGGATGCTTCCACACAGGGGGCACCAACCACCAGTGGAAACATGCACCCAAAATGCCCCAGGTCTCCCAGGCCACATGCCTGGTGAAGAAAGCTAGTTTTGGTGGGCACAGGTCAAAGGATGCCGCCACATGACACCTTGGAGAAGACAGTGCTACCGTGTTGGGAAGCAGGGCAGTGGTTTCGAGGGGCTACGGGTGGAGGGGCAAATGGAGGCGCTCTCTGGGGCAAAGGC-TGAGCACCTGCACCTCACCATGG---GCTGCGGCTGAGAGGCTG-TACAGCAGACACTGGCTTCAGTACATGCAGACTGAAGGAGGAAGGCGCCCACAAGTCAAAGACAGAGGGTGTCACCTCcatgaaacaaaaacattaaaaaaaaaaaaaccttctaaaATT-----------------AAGTATTTCTTAAGCACGTTGGACTTTGAGTTGACACAATCTGCCTGGGAGCATGGAAC--AAACCACTGGCTTGGCGACCCCGGAGGGAGAGGGTGGAGGGTTTAGACCTCAATTGAAGGGCTCAGTACCTGGCTATAGGAAATAACAGATTTCAAAAGTGGCAGGGAGGAAATAATTTCTGCTGATGAGGTTGCATTTCC i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e chlSab2.chr4 89575447 16 - 91010382 I e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=16480.000000 s hg38.chr3_KI270935v1_alt 27293 31 + 197351 CCAGATAGCCGGCAGAGTAAATTAAAGCAAT s panTro4.chr3 656593 31 - 202329955 CCAGATAGCCGGCAGAGTAAATTAAAGCAat i panTro4.chr3 C 0 C 0 s papAnu2.chr6 79537 31 + 174439528 CCAGATAGCTGGCAGAGTAACTTAAAGCAAT i papAnu2.chr6 C 0 N 0 s chlSab2.chr4 89575463 31 - 91010382 CCAGATAGCTGGCAGAGTAAATTAAAGCAAT i chlSab2.chr4 I 16 C 0 e calJac3.chr5 41958138 0 + 159171411 I e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=499.000000 s hg38.chr3_KI270935v1_alt 27324 2 + 197351 AT s panTro4.chr3 656624 2 - 202329955 ag i panTro4.chr3 C 0 C 0 s macFas5.chr6 180254804 2 - 181584905 ac i macFas5.chr6 N 0 C 0 s papAnu2.chr6 173133330 2 - 174439528 ac i papAnu2.chr6 N 0 C 0 s chlSab2.chr4 89575494 2 - 91010382 AT i chlSab2.chr4 C 0 I 12032 e calJac3.chr5 41958138 0 + 159171411 I e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=18084.000000 s hg38.chr3_KI270935v1_alt 27326 61 + 197351 agtcttgctctgttgcccaggctggagtgaagtggcgccatctccgctcactgtaagctcc s panTro4.chr3 656626 61 - 202329955 agtcttgctctgttgcccaggctggagtgaanngnnnccntctccgctcactgtaagctcc i panTro4.chr3 C 0 C 0 s macFas5.chr6 180254806 52 - 181584905 agtcttgctctgttgcccaggctggagggcagtggcgtgatctccgctgtcc--------- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173133332 52 - 174439528 agtcttgctctgttgcccaggctggagggcagtggtgtgatcttggctgtcc--------- i papAnu2.chr6 C 0 C 0 e calJac3.chr5 41958138 0 + 159171411 I e chlSab2.chr4 89575496 12032 - 91010382 I e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=115316.000000 s hg38.chr3_KI270935v1_alt 27387 97 + 197351 gcgggagaatctcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggcaacaagagcgaaactccgtctc s panTro4.chr3 656687 97 - 202329955 gcgggagaatctcttgaaccctggaggcagaggttgcggtgagccgagatcccgccattccactccagcctgggcaacaagagcgaaactccgtctc i panTro4.chr3 C 0 C 0 s macFas5.chr6 180254858 97 - 181584905 gcgggagaatctcttgaaccctggaggtggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagcgaaactccatttc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173133384 97 - 174439528 gtgggaaaatctcttgaaccctggaggcggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagcgaaactccatttc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89587528 97 - 91010382 gcgggaaaatctcttgaaccctggaggcggaggttgcagtaagctgagatcgcaccattgcactccagcctgggcaacaagagtgaaactccatttc i chlSab2.chr4 I 12032 C 0 s calJac3.chr2 136482 96 - 204313951 gcaggagaatctcttgaaccctggaggtggaggttatagtgacacaagatcatgccattgcactccagcct-tgcaacaagagctaaactccatctc i calJac3.chr2 T 47777 C 0 e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1911.000000 s hg38.chr3_KI270935v1_alt 27484 1 + 197351 a s panTro4.chr3 656784 1 - 202329955 a i panTro4.chr3 C 0 C 0 s macFas5.chr6 180254955 1 - 181584905 a i macFas5.chr6 C 0 I 5 s papAnu2.chr6 173133481 1 - 174439528 a i papAnu2.chr6 C 0 I 5 s chlSab2.chr4 89587625 1 - 91010382 a i chlSab2.chr4 C 0 I 5 s calJac3.chr2 136578 1 - 204313951 a i calJac3.chr2 C 0 I 5 s canFam3.chr34 30158491 1 - 42124431 A i canFam3.chr34 N 0 C 0 e ponAbe2.chr3 199676832 917 + 202140232 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=86666.000000 s hg38.chr3_KI270935v1_alt 27485 66 + 197351 aaccaaacaaaaT-------TAGGTAACTAACCCAGGACTA--AAACAGCGTAACTTTAAAAAAATAAGTCTAGG s panTro4.chr3 656785 66 - 202329955 aaccaaacaaaaT-------TAGGTAACTAACCCAGGACTA--AAACAGCGTAACTTTAAAAAAATAAGTCTAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199677762 64 + 202140232 AACCAAACAAAAT-------TAGATAACTAACCCAGGACTA--AAACAGCGTAACTT--AAAAAAAAAGTCTAGG i ponAbe2.chr3 M 917 C 0 s macFas5.chr6 180254961 67 - 181584905 aacaaaacaaaaT---TAGATAGATAACTCACCCAGCACCA--AAACTGCATAACT---AAAAAAAATGTCTAGG i macFas5.chr6 I 5 C 0 s papAnu2.chr6 173133487 69 - 174439528 aacaaaacaaaat---tagatagATAACTCACCCAGCACCA--AAACTgcataacta-aaaaaaaaaagtctagg i papAnu2.chr6 I 5 C 0 s chlSab2.chr4 89587631 67 - 91010382 aacaaaacaaaaT---TAGATAGATAACTAACCCAGCACCA--AAACTGCATAACT---AAAAAAAAAGTCTAGG i chlSab2.chr4 I 5 C 0 s calJac3.chr2 136584 72 - 204313951 aacaaaacaaaacaaaaAAATAGATAACTAACCTAGGACCA--AAACTGCATAACTTT-CAAAAAAATGTCTAGG i calJac3.chr2 I 5 C 0 s canFam3.chr34 30158492 62 - 42124431 GACAATAAAAAAT-----------TAAGTCATCTGAAAGTACTCAACTGCAAACCTC--TCAAGGTAAGTCTGCA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=796860.000000 s hg38.chr3_KI270935v1_alt 27551 434 + 197351 AGGTATGatgttcattccctgcaagccaataaaggtcac--------------gtctgggg---cataca--tctaaaaaaa------taatcctaaagaga---aagttatggtcacaaatatgttctgtatggtg----ttattaagagcaaaaa-tgggaaacaacccaaatatcagtaaaatgggactgAAC-CCTTG-------CAAATTTACTAAAATAA-----------AATTGT-----T---AAACATGATGCA---------------------------------CAAGACGAAGATTTTAA-------TAAAGTGAAAAGACAGGAAACATAC----TTACTAATGATTATTGGTTTATTTTTCATGCCACTTCATTCCACAAAAAGATTTCAGATATCTTAGAAAAAGACACACTAGAAATATTAAAATACTATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGTATGAGCCAAAGGGATCTACCCAGCTTTCAAAGCTGACCAC-ggccgtgc s panTro4.chr3 656851 439 - 202329955 AGGTATGatgttcattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tctaaaaaaa------taatcctaaagaga---aagttatggtcacaaatatgttctgtatggtg----ttattaagagcaaaaa-tgggaaacaacccaaatatcaataaaatgggactggAC-CCTTG-------CAAATTTACTAAAATAACTC------AAAATTGT-----T---AAACGTGATGCA---------------------------------TAAGACGAAGATTTTAA-------TAAAGTGAAAAGACAGGAAACATAA----TTACTAATGATTATTGGTTTATTTTTCATGCCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGACACACTAGAAATATTAAAATACTATCTGAACCAGAAGCAGAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAAGGGATCTACCCAGCTTTCAAAGCTGGCCAC-ggccatgc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199677826 442 + 202140232 AGGTATTatgttcattccccgcaagccaatagaggccac--------------gtctgggg---cataca--tttaaaaaaa------agatccttaagata---aagttatggtcacaaatatgttgtgtacggtg----ttattaagagcaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CCTTG-------CAAATTTACTAAAATAACTG------AAAATTGT-----T---AAAC---ATGCA---------------------------------CAAGACGAAGATTTTTA-ATAATTTAAAGTGAAAAGACAGGAAACATAA----TTACTAATGATTATTGGTTTATTTTTCATGCCACTTCATTCCACAAAAATATTTCAGACACCTTAGAAAAAGACACATTAGAAATATTAAAATACTATCTGAACCAGAAGCAAAATCAGGGTAAGGTAGCAGACAGGCGTATAAGCCAAAGGGATCTACCCAGCTTTCAAAGCTGACCAC-ggccgtgc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180255028 448 - 181584905 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaa------taatcctaaagatg---aagttacggtcacaaatatgttctgtacggtgttatttattaagagtaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAATAACTC------AACATTGT-----T---AAACATCTCGCA---------------------------------TAAGAGAAAGATTTTAA--TAATTTAAAGTGAAAAGACAGGAAACAAAA----TTGCTAATGATTATTGGTTTATTTTTCATGCCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGACACACTAGAAATATTAAAATACTCTCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAAGGGATCTACGCATCTTTAAAAGCTGACCAC-ggccctgc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173133556 443 - 174439528 agGTACTATGTCCATTCCCTGCAAGCCAATAAAGGCCAC--------------GTCTGGGG---CATACA--TCCAAGAAAA------TAATCCTAAAGATG---AAGTTACGGTCACAAATATGTTCTGTACGGTGTTATTTATTAagagtaaaaa-tgggaaacaaccCGAATATCAATAAAATGGGACTGAAC-CATTG-------CAAATTTACTAAAAT-----------AACATTGT-----T---AAACATCTCGCA---------------------------------TAAGAGaaagattttaa--taatttaaagtgaaaagacaggaaacaaaa----tTACTAATgattattggtttatttttcatgCCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGACAcactagaaatattaaaatactctCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAAGGGATCTACGCATCTTTAAAAGCTGACCAC-GGCCCTGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89587698 443 - 91010382 AGGTACTatgtccattccctgcaagccaataaaggccac--------------gtctgggg---cataca--tccaagaaaa------taatcctaaagatg---aagttacggtcacaaatatgttttgtacggtgttatttattaagagtaaaaa-tgggaaacaacccaaatatcaataaaatgggactgAAC-CATTG-------CAAATTTACTAAAAT-----------AACATTGT-----T---AAACATCTCGCA---------------------------------TAAGAGAAAGATTTTAA--TAATTTAAAGTGAAAAGACAGGAAACAAAA----TTACTAATGATTATTGGTTTATTTTTCATGCCACTTCATTCCACAAAAAGATTTCAGATATCTTACAAAAAGACATACTAGAAATATTAAAATGCTCTCTGAACCTGAAGCAAAATCAGGGTAAGCTAGCAGAAAGGCGTATAAGCCAAAGGGATCTACGCACCTTTAAAAGCTGACCAC-ggccctgc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 136656 445 - 204313951 AGGCATTATGTTTATTAACTGCAAGccaataaatgccac--------------atctgggg---catgca--tctaaggaaa------taattctaaagata---aagttatggtcacagatatgttctttatggtgttatttattagcagcaaaaa-tggga---aacccaaatatcaacaaaatgggactgAAT-CATTG-------AAAACTTACTAAAATAACTC------AAAACAGT-----TAAAAAACATTATGTA---------------------------------CAATAGGAAGATTTTAA--TACTTTAAAGTGAAAAGGCAGGAAACAGAA----TTACTAATGATTATTGGTTTAATTTTCATGCCACTTCATTCCACAAAAAGATCTCAGGTATTTTACAAAACGACACACTAGAAAAATTAAAACACTATCCGAACCAGAAGCAAAATCAGGGTAAGCTGGCAGAAAGTCGTATAAGCCAAAGGGAT---CGCAGCTTTCAAAGCTGACCCA-ggcggcgc i calJac3.chr2 C 0 C 0 s mm10.chr13 46070485 415 - 120421639 AGCTGTCATATTTATTTCCTCTGCACCAACAACATCCAT--------------TTTGGGGT---TATAAAG-TTCAAGGAAA------TAATTCAAAATATA---AAGTGTTGTGCATGAATATATTCCATATTTCCTTATTTATTAATAAAAAAAC-AAAGA---------------AATAAAATGGGAACGGTT-CATTG-------TAAACTT----AAACAATTC------AAAATAATGGTCAT---AAAGATTGTGCAC--------------------------------CAAGAGGAAAACCTTAATCTAATATTAACTGAAAATTCAGGAAAC--AA----TTAC----GATTATTGGTTTACTTTTTATGCTATTTAATTCCAC-CGAACATTTCAGCTAT-----------ACTCACTAGAAAAATAGAAAAACTATCTGAAAGTGA--TCAAATGAGAGCGCGTTTGCAATATGGGATGCTAGCCAC---GATCTAAGCAGCTTTC-AGGATGACAACAGGCCGGGC i mm10.chr13 N 0 I 218 s canFam3.chr34 30158554 502 - 42124431 AAGAAGAGTGCTCATTTCCTCCAAGCCAGTAAAGTCCACTTGGAGGACACTGGGCCTGAGGAAACATACAATTCCAAGAAAAGCAACCTAATCGTAAATAAAGACAAATTATA--CATGGTTAGAGTCTTCACAGGCTTCTTTAGTATTGGCAAAGATTTGGAAACCACCTAAACATCAATAAAATAGGAGTGGATGGATTGTCATAAACTAACTCATTAAAATAATTCTAAGATTACATTGC-----A---CACAGCTGTGCACCTATAAGCTGCATAGCACTGGATTAGGAGGATTAGGAGGAAGATCGTAA--TAATACAACACG-AAACACAGGAAAGTGAAAACGGTACTTACAACTCTTGGTTTCTTTCCCATGCCACTCAGTCCCAC-AAAAGAATCCGGGTACCTTACATAAGCACGCCCCAAAGGAA---AGACGCTCGGTGGACCAGCGGCGAGGTC-------GCGCGCGTCAGGGAGGACAAGC------------CCCGGTCGCCGACCCTCACCGA-GTCACCGG i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=400119.000000 s hg38.chr3_KI270935v1_alt 27985 251 + 197351 gcagtggctctgtctgtaatctccgcacttggggaggccgaggaggtaggatcgcttgaggccacaagttcgagaccagcctgggcaacagagcaagatcccgcctctaccaaaaatttaaaaatcagccggAAGCCAGACACTAGGGACATGGCTGAGGATCGCTCCCGC--CCCTCGGAGGCCAGAAACCGAGGGTCACTCCCGCTCTCTAGAGGCCGGAGGCCCCGGGCCGCTCCCGCCCACCTCCGCGG s panTro4.chr3 657290 251 - 202329955 gcagtggctctgtctgtaatccccgcacttggggaggccgaggagggaggatcgcttgaggccacaagttcgagaccagcctgggcaacagagcaagatcccgcctctaccaaaaatttaaaaatcagccggAAGCCAGAGGCTAGGGACATGGCTGAGGATCGCTCCCGC--CCCTCGGAGGCCGGAAACGGAGGGTCACTCCCGCTCCCTAGAGGCCGGAGGTCCCGGGCCGCTCCCGCCCACCTCCGCGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199678268 251 + 202140232 gcagtggctatgtctgtaatctccgcacttggggaggccgaggagggaggatcacttgaggccagaagttcgagaccagcctgggcaac--agcaagatcccgcctctacaaaaaatttaaaaatcagccggAAGCCAGAGGCTGGGGACATGGCTGAGGATCGCTCCCCCCTCCCTCGGAGGCCGGAAACCGACGGTCACTCCCGCTCACTAGAGGCCGGAGGCCCCGGGCCGCTCCCGCCCACCTCCGCGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180255476 251 - 181584905 gcggtggctccgcccctaatccccgcacttggggaggccgaggagggaggatcgcttgaggccaagagtttgagaccagcccgggcaacacagcaagatcccgccactgcaaaaaatttaaaaattagccggAAGCCAGAAGCTAGGGACATGGCTGAGGATCGCTCCCGC--CCCTCGGAGGCCGGAGACCGAGGGTCACTCCCGCTCAGTAGAGGCCGGAGGCCCCGGGTCGCTCCCGCCCACCTCCGCGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173133999 251 - 174439528 GCGGTGGCTCCGCCCCTAATCCccgcacttggggaggccgaggaaggaggatcgcttgaggccaagagtttgagaccagcccgggcaacacagcaagatcccgccactacaaaaaatttaaaaattagccggaagcCAGACGCTAGGGACATGGCTGAGGATCGCTCCCGC--CCCTCGGAGGCCGGAGACCGAGGGTCACTCCCGCTCAGTAGAGGCCGGAGGCCCCGGGTCGCTCCCGCCCACCTCCGCGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89588141 251 - 91010382 gcggtggctccgcccctaatccccgcacttggggaggccgaggagggaggatcgcttgaggccaagagttcgagaccagcccgggcaacacagcaagatcccgccactacaaaaaaattaaaaattagccggAAGCCAGAAGCTAGGGACATGGCTGAGGATCGCTCCCGC--CCCTCGGAGGCCGGAGACCGAGGGTCACTCCCGCTCAGTAGAGGCCGGAGGCCCCGGGTCGCTCCCGCCCACCTCCGCGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137101 245 - 204313951 gctgtggctccgcccgtaatc-ccacatgttaggaggcagaggagggaggatcgcttgaggccaagagttcgagacc-----gggcaacaaagcgagagcccgcctctacaaaaaatttaaaaattagccggAAGCCAGAGGCTGGGGACATGAATGAGGGTGACTCCCAC--CCCTCCGAGGCCGGAGGCCGAGGGTCACTCCCGCTCACTAGAGGCCGGAGGCCCAAGGCAGCTCCCGCCCAACCCCGCGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30159056 133 - 42124431 CCCGTGTCCACCGCCGCGGCCCCCGCA---GGGTGGACCGGAGCG------------------------------CCCGCCCGG-----------------CGCCCTGAC--------------CTACTCCGACCCCTGA--------------------------CCCAC--CCCTAGTCCGCCCGA---------------CTTTTCCCT---------AGGCCCTGACCTACCCCTGGCCCCCCAC---- i canFam3.chr34 C 0 C 0 e mm10.chr13 46070900 218 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1273153.000000 s hg38.chr3_KI270935v1_alt 28236 742 + 197351 ACGAGCGCCGCCCCTTCGACCCCATTCCCTGAGGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAgaaccacccacg--gggctttaaaaaatgttggtgccCAACATCTCCCCGAAATAGGGC---------------CCGCCCTATCTCGGTCGGGGAGCGCGGGACCTCCGTGG--CCACCCAGCGCCACCGTCCGCGGGTCCGCTTTGCGCAGGCGCGGCGTCCCCGCCCATTAGACCCCTGCCC-GGGCGTGTCGTGGTGCGCAGGCGCGATGTCCCCCACTAGCGCCCCGC---------------------------------------CTTGACCCGGCCGTGGTGCGCAGG----------------------------------------------CGCAGTCTG-CGCAGGGACTGGCGGGACTGCGCGGCGGCGACTACAGACGTGTCGGGGGTCCGGGGCCTGTCGCGGTTGCCAAGCGCTCGGCGCTTGGCGCTGGCGCTGGCCAAGGCGGTGAGTCCCTGCCgcggac-----cggggcagggcaggcggggggcgaggcggcggtaggagcgggacggtccccagcgggtccgagcgga-gcgggcgccgggT--------GCCCGCGCCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGA----GCCGCGGAGTG----TACTCGGGGGCCTGGGGAGCTCGGTCCTTAGCAGGT----AGGCCGCGTCCCGGTGAAGGTCGCGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCGCCGCTTTGG-TCCGGGCCTGGGGTCCGGCGACCTCGCGGGCTGAGGTAGCC-C s panTro4.chr3 657541 743 - 202329955 ACGAGCGCCGCCCCTTCGACCCCATTCCCTGCAGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAGAACCACCCACG--GGGCTTTAAAAAATGTTGGTGCCCAACACCTCCCCGAAATAGGGC---------------CCGCCCTATCTCTGTCGGGGAGCGCGGGACCTCCGTGT--CCACCCAGCGCCACCGTCCGCGGGTCCGCTTTGCGCAGGCTCGGCGTCCCCGCCCCATAGACCCCGGCCC-GGGCGTGTCGTGGTGCGCAGGCGCGATGTTCCCCACTAGCGCCCCTCT--------------------------------------CTTGACCCGGGCGTGGTGCGCAGG----------------------------------------------CGCAGTCTG-CGCAGGGACTGGCGGGACTGCGCGGAGGCGACTACAGACGTGTCGGGGGTCCGGGGCCTGTCGTGGCTGCTAAGCGCTCGGCGCCTGGCGCTGGCGCTGGCCAAGGCGGTGAGTCCCTGCCgcggac-----cggggcagggcaggcggggggcgaggcggcagtaggagcgggacggtccccagcgggtccgagcgga-gcgggCGCCGGGT--------CCCCGCGCCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGA----GCCGCGGAGTG----TACTCGGGGGCCTGGGGAGCTCGGTCCTTAGCAGGT----AGGCCGCGTCCCGGTGAAGGTCGCGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCGCCGCTTTGG-TCCGGGCCTGGGGTCCGGCGACCTCGCGGGCTGAGGTAGCC-C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199678519 788 + 202140232 ATGAGCGCCGCCCCTTGGATCCCATTCCTTGTGGTCTGGACGTTCAGGCCCTCTCGGTCTGGGAGATCCCGGAgaaccacccacg--gggctttaaaaaatgttggtgcccaacacctccccgaaatAGGGC---------------CCGCCCTATCTCGGTCGGGGAGCGCAGGACCTCTGTGT--CCACCCAACGGCACCGTCCGCGGGTCCACTTTGCGCAGGCGCGGTGCCCCCGCCCCTTAGACCCTGGTCC-GGGCGTGGCGTCGTGCGCAGGCGCGGTGTCCCCCAATACCGCCCCCCC--------------------------------------CTTGACCCGGGCGTGGTGCGCGGGTCGAGTCTCCCCCCTCCCCCAGCTCTACCGGGGTGTGTTGCGCAGCCGCAGTCTG-CGCAGGGACTGGCGGGACTGCGCGGCGGCGACTACCGACATATCGGGGGTTCGGGGCCTGTCGCGCCTGCTAAGCGGTTGGCGC------CTGGCGCTGGCCAAGGCGGTGAGTCCCTGCggcggaccggggcggggcagggcaggtggggggcgaggcggcggtaggagcgggacggtccccagcgggtccgagcgga-gcgggCGCCGGGT--------CCCCGCGCCCCCTGC----CCGGGGATCGGGAAGGGGCTGGGAGAGCCCTGGGACGGTGCGAGGGGGA----GCCGCGTGGTG----TACTCGGGGGCCTGGGGAGCTCGGTCCTTAGCAGGT----AGTCCGCGTCCCGGTGAAGGTCACGACCCCGCGGGCTTGCT------GGGCGTCCCCTCCGCCGCTTTGG-TCCGGGCCTGGGGTCCGGCGACTTCGCGGGCTGAGGTAGCC-C i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180255727 779 - 181584905 GCGAGCGCAGCCCCTCCGACCCCATTCCCTGTGGTCTGGACGTTCAGGTGCCCTCTGTCTGGGCGATCCCGCAGAACCACCCATG--GCGTTTT-AAAAATGTTAGTGCCCAACACCTCCCCAAAATAGGGC---------------CCGCTCTACCTCGGTCGGGGAGCCCAGGACCTCCGCGTCCCCCCTCAACGCCTCCGTCCGCGAGTCCGCTTTGCGCAGGCGCGGCGCCCCCACTCAG----CCCCCGCCC-GGGCGTGACGTAGTGCGCAGGCGCGATGTCCCCCACTACCGCCCCGCTCGACCCCGGCGTGGTGCGCAGGCGCGATATCCCCCTAGCGCGACCCCGGCGTGGTGCGCAGG----------------------------------------------CGCAGTCTG-CGCAGGGACTGGCGGGGCTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCCGGAGACTGTCGCGGCTGCTGAGCACTCGGCGC------CTGGCGCTGGCCAAGGCGGTCAGTCCGTACCGCGGAC-----CGGGGCGGGACAGGCGGGGGCCGAGGCGGCGGTAGGAGCGGGACGGTCCCCAGCGGGTGCGAGCGGA-Gcgggcgccgggtccccgcgcccccgcgcccccggt----ccggggATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGCGGA----GCCGCGGGGCG----GACTCGGGGAACCGGGGAGCTCGGTCCTTAGCAGGT----AGTCCGCGTCCCGGTGAAGGTCACGACCCCGCGGGCTTGCT------GGTTGTCCGCTCTGCCGCCTTGG-TCCGGGCCT-GGGTCCGGGAACCCCGCGGGCTGAGGTGGCC-C i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173134250 730 - 174439528 ACGAGCGCAGCCCCTCCGACCCCATTCCCTGTGGTCTGGACGTTCAGGCCCCCTCGGTCTGGGCGATCCCGCAGAACCACCCACG--GCGCTTT-AAAAATGTTGGTGCCCAACACCTCCCCGAAATAGGTC---------------CCGCACTACCTCGGTTGGGGAGCCCAGGACCTCCGCGT-CCCCCTCAACGCCTCCGTCCGCGGGTCCGCTTTGCGCAGGCGCGGCGCCCCCACTCAG----CCCCCGCCC-GGGCGTGACGTGCTGCGCAGGCGCGATGTCCCCCACTACCGCCCCGCT----------------------------------------CGACCCCGGCGTGGTGCGCAGG----------------------------------------------CGCAGTCTG-CGCAGGGACTGGCGGGACTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCCGGGGGCTGTCGCGGCTGCTGAGCACTCGGCGC------CTGGCGCTGGTCAAGGCGGTCAGTCCGTACCGCGGAC-----CGGGGCGGGACAGGCGGGGGCCGAGGCGGCGGTAGGAGCGGGACGGTCCCCAGCGGGTGCGAGCGGA-GCGGGCGCCGGGT--------CCCCGCGCCCCCTGT----CCCGGAATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGCGGA----GCCGCGGGGCG----GACTCGGGGAACCGGGGAGCTCGGTCCTTAGCAGGT----AGTCCGCGTCCCGGTGAAGGTCACGACCCTGCGGGCTTGCT------GGTCGTCCGCTCTGCCGCCTCGG-TCCGGGCCT-GGGTCCGGGGACCCCGCGGGCTGAGGTGGCC-C i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89588392 780 - 91010382 ACGAGCGCAGCCCCTCCGACCCCATTCCCTGTGGTCTGGACGTTCAGGCCCCCTCTGTCTGGGCGATCCCGCAGAACCACCCATG--GCGCTTT-AAAAATGTTAGTGCCCAACACCTCCCCGAAATAGGGC---------------CCGCTCTACCTCGCTCGGGAAGCCCAGGACCCCCGCGT-CCCTCGCAACGCCTCCGTCCGCGGGTGCGCTTTGCGCAGGCGCGGCGCCCCCACTCAGC--CCCCCCGCCC-GGGCGTGACGTAGTGCGCAGGCGCGATGTCCCCCACTACCGCCCCGCTCGACCCCGGCGTGGTGCGCAGGCGCGATATCCCCCTAGCGCGACCCCGGCGTGGTGCGCAGG----------------------------------------------CGTAGTCTG-CGCAGGGACTGGCGGGACTGCGTGGCGGCGTCAACAGTCATGTCGGGGGTCAGGAGgctgtcgcggctgctgagcactcggcgc------ctggcgctggcCAAGGCGGTCAGTCCGTACCgcggac-----cggggcgggacaggagggggccgaggcggcggtaggagcgggacggtccccagcggatgcgagcgga-gcgggcgccgggtccccgcggccccgcgcccccggt----cccgggATCGGGAAGGGGCTGGGAGAGCCCTGGGCCGGTGCGAGGGGGA----GCCGCGGGGCG----GACTCGGGGGACCGGGGAGCTCGGTCCTTAGCAGGT----AGTCCGCGTCCCGGTGAAGGTCACGACCCCGCGGGCTTGCT------GGTCGTCGCCTCTGCCGCCTTGG-TCCGGGCCT-GGGTCCGGGGACCCCGCGGGCTGAGGTGGCT-C i chlSab2.chr4 C 0 C 0 s calJac3.chr2 137346 775 - 204313951 ACAAGCGCCGCCCCTCCGACCCCATTCCCTGAGGGCTGGACGTTCAGGCCCTCTCGATCTGGGCGATCCCGGAGAACCATCCACG--GGGCTTT-AAAAATGTTGGTGCCCGACACCTCCCCAGAACAGGGC---------------CCGCCCTACCTCAGTCCGAGAAAGCGGGACCTCGGTGT-CGCCCCCAGCGCCACCGTCCGCAAGTCCGCTTTGCGCAGGCGCGGCGCCCCCACTCAG----CCCCCGCCCAGGGTGTGGCGTGGTGCGCAGGCGCGACGTCCCCCGCGGCCGCCCAGCTGGACCCCGGCGTAGTACGCAGGCGCGGTATCCCCCCAGCGCGACCCCGGTGTGGTGCGCAGG----------------------------------------------CGCAGTCTG-CGCGGTGACTGGCGGGACAGTACGGCTG---CAACTGACATGTCGGGGGTCCGGAGGCTGTCACGGCTGCTGAGCGCCCAGCGC------CTGGCGCTGGCCAAGGCAGTGAGTCCGTGCCGCGGAC-----CGGGGCGGGGCAGGCAGGGGCCGAGGCAGCAGTAGGAGCGGGTCGGTCCACAGCGGGTCCGAGCGGA-TCGAGCGCCGGGT--------CCCCGCACCCCCTGC----CCGGGGATCCGGAAGGGGCTGAGAGAGCCCTGGGCCGGTGCGAGGGGGA----GCAgcggggcg----gacccgggggccggggggggTCAGTCCTTAGCAAGT----CGTCCGCCTCCCGGTGAAGGTCACGACCCCACGGGC-TGCTCGGCCCGGGGGTCCCCTCCGCCGCACTGG-TCCGGGCCTGGGGTCCGGGGACCCCGCGGGCTGAGGTAGCCAC i calJac3.chr2 C 0 C 0 s mm10.chr13 46071118 526 - 120421639 GCGATCTCCGCCCC-AGGACCCTACTTCCATCTCTCCAGATCATCCGACCCTCTCTGTTTTGGCAAAC---AAGAACCACCCGAGAAGCACTTT-AAAGACATTGGCACCTCACTTACCCCTGGAGCAGAGCCCATCAGCGTTGCTGCCACCCTACCTCAGAC------------------GTGT----------TGCCACCGC---CGCGTTTACAGGGCGCAGGC---GCACCACCACTC------ACGCGAGCC-AGGAGGGGCGTGTTGCGCAGGCGCAGAATCTTCCAAGCCCGACACCCG--------------------------------------CGCGACTC------GGTGCGCAAG----------------------------------------------CGCAGTCTGTCGCTGGGGCTTGCGGGAAGG--------------CAGACATGGCCGGGGTTGGCGCAGTTTCGAGGCTTCTTCGCGGGCGGCGC------TTGGCGTTAACTGGGGCGGTGAGTTAGTGCCACGAAA-----TGGCA----------------------GGCGCTAGGAGT---------------------------------GCGCCACGA--------TTCCACCCGAGTTGG----CCTGAGTCTGGGAAGGTGCAG---------TGGGCCG---------------------------------------------------------------AAGC----CGACTGCTTTCCGGCGAAGGTCACGACCCCGAGGTC-----------G-------------------------CGGGCGTGGAGTCTGG---CCTT-----------------C i mm10.chr13 I 218 C 0 s canFam3.chr34 30159189 598 - 42124431 -CGAACACCGCCC---------------------------------GGCCCCC--------------------GACTCACCCCCG--GGA-------------------------------------GGGGA---------------GCGCTCGG----------------------CTCCGGAT--GCCCTCAGCGGCACGGTCTGCGGACC--CTGTGCGCAGGCGCGATGCCCCCA---------CCGCGG----GGTCGCGGCGTGGTGCGCAGGCGCGGTGTCCCCGCGTCCTAGGCTGGG--------------------------------------CGCGACTA------GATGCGCAGG----------------------------------------------CGCAGTGTGGCGCGGGGGTTGGTGGGACAGCGCGGTGGAG--GACAGACATGTCGGGGGTCCGGGCGGTGTCTCGGCTGCTGGGCGCCCGGCGC------CTGGCGCTGACCAGAGCAGTGAGTCTTCGCCGCGGAG-----CGG-GCAGGGT--GCGGGGATCGAGGGG------GGCGCAGGACGGTCTCC-GCGGGCCCGAGCGGACGCGAGTgccccg---------ccccgccccgcccgcagggccccggccTGGGGAGGGTCTG---------CGGGCGGGTGCGGGGAGGAGGTCGCCGGAGGGTGGGGCGACCCGCAGGGCAGCGGG---CAGTTTCCAGGAGCCCGCGGGTCTGCGTCCCTGTGAAGGTCATGACCCCGCGTGCCGCCC------CGGGGACGCTTCCGCTGCCTGGGATCCAGGCCTGGGGGCCGGGGGCCTCGCGGGCTACGGTCGCT-C i canFam3.chr34 C 0 I 431 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=107158.000000 s hg38.chr3_KI270935v1_alt 28978 59 + 197351 CTCGCCTC--TGCCTGGCGGGTGGACTCGGGGAGGAGTCGTGTCTGCCCAAGGTCACCGGG s panTro4.chr3 658284 61 - 202329955 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAGGAGTCGTGTCTGCCCAAGGTCACCGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679307 61 + 202140232 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAGGAGTCGTGTCTGCCGAAGGTCACCGGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256506 61 - 181584905 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAGGAGTCGTGTCTGCCCAAGGTCACTCGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173134980 61 - 174439528 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAGGAGTCGTGTCTGCCCAAGGTCACTCGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89589172 61 - 91010382 CTCGCCTCAGTGCCTGGCGGGTGGACTCGGGGAGGAGTCGTCTCTGCCCAAGGTCACCCGG i chlSab2.chr4 C 0 I 20 s calJac3.chr2 138121 61 - 204313951 CCCGCCTCAGTGCCTGGCTCGTGGACTCGGGGAGGAGTGGTGTTTGCCCAAGGTCAACCGG i calJac3.chr2 C 0 C 0 s mm10.chr13 46071644 38 - 120421639 CCCGTCT--------------TGGTCTAGCGAAG---------TTCTCCAAGGTTAAAGGG i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1882.000000 s hg38.chr3_KI270935v1_alt 29037 6 + 197351 GTGGAG s panTro4.chr3 658345 6 - 202329955 GTGGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679368 6 + 202140232 GTGGAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256567 6 - 181584905 GCGGAT i macFas5.chr6 C 0 I 15 s papAnu2.chr6 173135041 6 - 174439528 GCGGAT i papAnu2.chr6 C 0 I 15 s calJac3.chr2 138182 6 - 204313951 GCGTAT i calJac3.chr2 C 0 I 15 s mm10.chr13 46071682 1 - 120421639 ----A- i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e chlSab2.chr4 89589233 20 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=136996.000000 s hg38.chr3_KI270935v1_alt 29043 101 + 197351 TCCTGGCTGGGCCGGGCCTCTGCCGCCCTCTGTGAGGGTTGTCCTGCGGGGCCGCCCGCAGCCCGTGGGTGGGGCCGGCGGGGCGGGTGAAACCGCCTGGG s panTro4.chr3 658351 101 - 202329955 TCCTGGCTGGGCCCGGCCTCTGCCGCCCTCTGTGAGGGTTGTCCTGAGGGGCCGCCCGCAGCCCGTGTGTGGGGCTGGCGGGGCGGGTGAAACCGCCCGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679374 101 + 202140232 CCCTGGCTGGGCCGGGAGTCTGAGGACCTCTGTGAGGGTTGTCCTGAGGGACCGCCCGCATCCGGTGGGTGGGGCTGGCGAGGCGGGTGAAACTGCCCGGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256588 101 - 181584905 TCCTGGCTGGGCTGGGCCTCTGCCGCCCTCTGTGCGGGTTGTCCCGAGGGGCCGCCCGCAGCCCGTGGGTGTGGCGGGCGGGGCGGGTGAAACCGCCCGGG i macFas5.chr6 I 15 C 0 s papAnu2.chr6 173135062 101 - 174439528 TCCTGGTTGGGCTGGGCCTCTGCCGCCCTCTGTGCGGGTTGTCCCGAggggccgcccgcagcccgtgggtggggtgggcggggcgggtgaaaccgcccggg i papAnu2.chr6 I 15 C 0 s chlSab2.chr4 89589253 101 - 91010382 TCCTGGCTGGGCTGGGCCTCTGCCGCCCTCTGTGCGGGTTGTCCCGAGGGGCTGCCCGCAGCCCGTGGGTGGGGCGGGCGGGGCGGGTGAAACCACCCGGA i chlSab2.chr4 I 20 C 0 s calJac3.chr2 138203 75 - 204313951 CCCTGACTGGGCCGGGCCTCTGCCGCCTGTTGTGCTGGTTGTC---------------TGTCCCGCAGGTGGGGCGGACGGGGCGGGTGC----------- i calJac3.chr2 I 15 C 0 s mm10.chr13 46071683 62 - 120421639 --------GGGACCGGCCTGTTGCATTCTGGATGCGGAC--------GGGTCTGCGAGTAATCCGTTGGTAGTCTGGG----------------------- i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=170798.000000 s hg38.chr3_KI270935v1_alt 29144 108 + 197351 TGGGTGCGAGGAGTGGCCGGGCTCGGCCGGG-TGGGTGTCCGGTGGGAAGCGCGGCGCGCCCGAGCTTGGGCTTGCAGTTCCCCTTTCCAG-AGAGCGCAAATCTGTGCA s panTro4.chr3 658452 108 - 202329955 TGGGTGCGAGGAGTGGCCGGGCTCGGCCGGG-TGGGTGTCCGGTGGGAAGCGCGGCGCGCCCGAGCTTGGGCTTGCAGTTCCCCTTTCCAG-AAAGCGCAAATCTGTGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679475 108 + 202140232 TGGATGCGAGGAGTGGCCGGGCTCGGCCGCG-TGGGCGTCCGGTGGGAAGCGCTGCGCGCCCGAGCTTGAGCTTGCAGTTCCCGTTTCCAG-AAAGCGCAAATCTGTGCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256689 108 - 181584905 TGGGTGCGAGGAGTGGCCGGGCTCGGCCA-G-TGGGCGGCCGGTGGGAAGAGCTGCGCGCCCGAGCTTAGGCTTGCAGTTCCGCTTTCCAGAAAAGCGCAAATCTGTGCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135163 107 - 174439528 tgggtgCGAGGAGTGGCCGGGCTCGACCG-G-TGGGCGGCCGGTGGGAAGCGCTGCGCGCCCGAGCTTGGGCTTGCAGTTCCGCTTTCCAG-AAAGCACAAATCTGTGCG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89589354 109 - 91010382 TGGGTGCGAGGAGTGGCCGGGCTAGGCCGCG-TGGGCGTCCGGTGGGAAGCGCTGCGCGCCCGAGCTTAGGCTTGCAGTTCCGCTTTCCAGAAAAGCGCAAATCTGTGCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 138278 98 - 204313951 -----------AGTGGCCGGGCTCCACCCGGCCGGGCGTCGGGCGGGAAGCGCGGCGCGCCAGAGCTTGGGCCTGCAGTTCCCCTTTCCAG-AAAGCGCAAATCTGTGCA i calJac3.chr2 C 0 C 0 e mm10.chr13 46071745 0 - 120421639 C e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=229345.000000 s hg38.chr3_KI270935v1_alt 29252 159 + 197351 TGTCCACTTCGGGATCTTGGAAGTTAAGGACCTGTACTTT----GGGTCCCGTTTGGTGGCCCTTGTGCCACAAA-AATGTGCCGGTGTTTAAAAGCAGCTGTGCCAGTTTTTAAAAATCAGACGGAGAGCTCAGGGCACTGACCGAGCGAGGACTCCAGGACC s panTro4.chr3 658560 160 - 202329955 TGTCCACTTCGGGACCTTGGAAGTTAAGGACCTGTACTTT----GGGTCCTGTTTGGTGGCCCTTGTGCCACCAACAATGTGCCGGTGTTTAAAAGCAGCTGTGCCAGTTTTTAAAAATCAGACGGAGAGCTCAGGGCACTGACCGAGCGAGGACTTCAGGACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679583 160 + 202140232 TGTCCACTTCGGGACCTTGTAAGCTAAGGGCCTCTACTTT----GGGTCCTGTTTGGTGGCCCTTGTGCCACCAAAAACGTGCCAGTGTTTAAAAGCAGCTGTGCCAGTTTTTAAAAATGAGACGGAGAGCTCAGGGCACTGACCGAGCGAGGACTCCAGGACC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256797 159 - 181584905 TGTCCACTTCGCGACCTTGTAAGTTAAGGGTGTCAACTTT----GGGTCGTGTTTGGTGGCCCTTGTGCCACTGAAAATGTGTCGGTGTTTACAAGCAGCTGTGCCAGTTTTTAAAAATCAGACGGAGAGCTCAGCGCACTGACCGGGCGAGGACG-CGGGACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135270 159 - 174439528 TGTCCACTTCGCGACCTTGTAAGTTAAGGGTGTCTACTTT----GGGTCGTGTTTGGTGGCCCTTGTGCCACTGAAAATGTGCCAGTGTTTAAAAGCAGctgtgccagtttttaaaaatcagacggAGAGCTCAGCGCACTGACCGGGCGAGGACG-CGGGACC i papAnu2.chr6 C 0 I 9498 s chlSab2.chr4 89589463 159 - 91010382 TGTCCACTTCGCGACCTTGTAAGTTAAGGGTGTCAAGTTT----GGGTCGTGTTTGGTGGCCCTTGTGCCACTGAAAATGTGCCAGTGTTTAAAAGCAGCTGTGCCCGTTTTTAAAAATCAGAGGGAGAGCTCAGCGCACTGACCGGGCGAGGACG-CGGGACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 138376 129 - 204313951 TGTCCACATGGAGACCTTGTAAGTGAAGGGCCTCTGCTTTGCGGGGGTGGTGTTTGGTGGCCCTTGTGC-----------------------------------GCAGTTTTTAAAAATCAGACCGAGAGCTCCGCGCACTGACCGGGCCAGGACGCCAGGACC i calJac3.chr2 C 0 C 0 s mm10.chr13 46071745 113 - 120421639 TGTCGACACTAAGA-CTTATAAGTGATGAGCTTAC---------AGGTTTTGTGTAGTGGCCTT---------------------------------AGCTA---CTGTTTTTAAATATCAAAGAGATATTTGAAGAT----ACCAGGTGAGACTT-CTGCACC i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=57818.000000 s hg38.chr3_KI270935v1_alt 29411 41 + 197351 TGTG----------CTTGCCTGTGCGC--TGAGTACCTCG-AGGGCCGGGCTCG s panTro4.chr3 658720 41 - 202329955 TGTG----------CTTGCCTGTGCGC--TGAGTACCTCG-AGGGCCGGGCTGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679743 41 + 202140232 TGTG----------CTTGCCTGTGCGC--TGAGTACCTGG-AGGGCCGGGCTCC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256956 41 - 181584905 GGTG----------CTTGCCTGTGCGC--TGAGTGCCTCG-AGGGCCGGGCTCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173144927 41 - 174439528 GGTG----------CTTGCCTGTGCGC--TGAGTGCCTCG-AGGGCCGGGCTCG i papAnu2.chr6 I 9498 T 9539 s chlSab2.chr4 89589622 42 - 91010382 GGTG----------CTTGCCTGTGCGC--TGAGTGCCTCGCGGGGCCGGGCTCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 138505 43 - 204313951 CGTG----------CCTTCCCGTGCGTTGTGAGTGCCTCG-AGGGCCGGGCTCG i calJac3.chr2 C 0 C 0 s mm10.chr13 46071858 41 - 120421639 -GTGTTCATCCAGTCTTGCGACTTCTT--TTTGCATTTGA-AGAG--------- i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=483066.000000 s hg38.chr3_KI270935v1_alt 29452 269 + 197351 GCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCTGAGT--GTCTGAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGATTTCATTTAATCAAGCGAAATTGGATAGGTTTAGTTGTTTGGTTCTTTTAAATGAACTTAGCCACCCACCTC-TTAATTACAAAGTAATTTTAAATTGCAGAGTAAAAATCTCAATAGAGGAACCAAGGCATTCAGCAATATTGATTTGAATTATGCCTGTGATT s panTro4.chr3 658761 270 - 202329955 GCTTAGTCCAGGATGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCTGAGTTTGTCTGAATGTGCCCTCTA-CGATTGCATCTTCAGAATCGGCCTTCTAGGATTTTATTTAATCAAGCGAAATTGGATAGGTTTAGTTGTTTGGTTCTTTTAAATGAACTTACCCACCCACCTCCTTAATTACAAAGTAATTTTAAATTGCAGAGTAAAAATCTCAATAG--GAACCAAGGCATTCAGCAATATTGATTTGAATTATGCCTGTGATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199679784 267 + 202140232 GCTTAGGCCAGGACGATGGTCAGGGTTATACTTCCCTGA--------GCCCTTGCTCTCTGAGTTTGTCTGAATGTGCCCTCTA-CCATTGCATCTTCAGAATCGGCCTTCTGGGATTTTATTTAATCAAGCTAAATTGGATAGGTTTA---GTTTGGTTCTTTTAAATGAACTTACCCACCCACCTCCTTAATTACAAAGTAATTTTAAATTGCAGAGTAAAAATCTCAATAG--GAACCAAGGCATTCAGCAATATTGATTTGAATTATGCCTGTAATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180256997 270 - 181584905 GCTTAGTCCAGGATGACGGTCAGGGTTATGCTTCCCTGA--------GCCCTCGCTCTCTGAGTTTGTCTGAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACGAAGTAATTTTAAATTGCAGAGTAAAAATGTCAATAG--GAACCAAGGCATTCAGCAATATTGATTTGAATTATGTCTATAAAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135429 270 - 174439528 GCTTAGTCCAGGGTGACGGTCAGGGTTGTACTTCCCTGA--------GCCCTCGCTCTCTGAGTTTGTCTGAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTAATCAAGCTGAATTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACGAAGTAATTTTAAATTGCAGAGTAAAAATGTCAGTAG--GAACCAAGGCATTCAGCAATATTGATTTGAATTATGCCTATAAAT i papAnu2.chr6 T 9539 C 0 s chlSab2.chr4 89589664 270 - 91010382 GCTTAGTCCAGGATGACGGTCAGGGTTATACTTCCCTGA--------GCCCTCACTCTCTGAGTTTGTCTGAATGTGCCCTCCA-CGATTGCATCTTCAGAATCGGCCTTCTAGGGTTTTAGTTCATCAAGCTGAACTGGATAGGTTTCGTTGCTTGGTTCTTTTGAATGAACTTACCCACCCACCTCCTTAATTACGAAGTAATTTTAAATTGCAGAGTAAAAACGTCAATAG--GAACCAAGGCATTCAGCAATATTGATTTAAATTATGCCTGTAATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 138548 266 - 204313951 GACTAGTCCAGGATGAAGGGCAGGGTTATACTTCCCTGA--------TCCCTTGCTGTCTGAGTTTGTCTGAATGTGCCCTCTG-CTATTGCCTCTTCAGAATCGGCCTTCTAGGGTTTTATTTAATCAAGGTAAATTTGATAGGTTTAGTTATTTGGTTCTTTGAAATGAACTTACCCACCCAC----TTAATTACAAAGTAATTTTAAATTGCAGAGTAAAAATGTCAGTAG--GAACCAAGGCATTCAGGAATATTGATTTGAAATATGCCTGTAATT i calJac3.chr2 C 0 C 0 s mm10.chr13 46071899 242 - 120421639 -----GTACACAGTGAC--TCAGGGTTGCAGGGGTCTGATGTTGGCCTCCCAGATTGTCAGATCTTGTCTCAGTGCACTCTTTGCCGGTCACCTGTTATTCGTCACACTCCTAGGGTTTTATTAACGTAAACTAAATTTGACAGGT--------TGGGTTCTTTAAAGTT--CTGTCTCACCTACCTACTTAA--------CAATTT--AATTACAAAGTAA----------AG--GCCCTAAGACATTGAACAGTATCGACTTGCATTGTGCATCAAATT i mm10.chr13 C 0 C 0 e canFam3.chr34 30159787 431 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=367252.000000 s hg38.chr3_KI270935v1_alt 29721 241 + 197351 G----TGCAATTTTCTCCTTTTTGAAATAGTTATTGAAAATCTCTTTGAATTAAATGT--GAGGATTAGTCATACAGCCATCCTGTCAACATCGGAAAGCGTGT--AAACCGTTCTAGCGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCG-CATCTTGGGCTCTTAGGAGCTGCTGGGAGGGCGTCCACAAGCAGG-----AGGTGAAGCCCATGGTCAGTGGGACTTTTTAGGGGCAATGGTA s panTro4.chr3 659031 241 - 202329955 G----TGCAGTTTTCTCCTTTTTGAAATAGTTATTAAAAATCTCTTTGAATTAAATGT--GAGGGTTAGTCATACAGCCATCCTGTCAACATCGGAAAGCGTGT--AAACCGTTCTAGCGTGTTACTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCG-CATCTTGGGCTCTTAGGAGCTGCTGGGAGGGCGTCCACAAGTAGG-----AGGTGAAGCCCATGGTCAGTGGGACTTTTTAGGGGCAATGGTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680051 241 + 202140232 G----TGCAGTTTTCTCCTTTTTGAAATAGTTATTAAAAATCTCTTTGAATTAAATGT--GAGGATTAGTCATACAGCCATCCTGTCAACATTAGAAAGCATGT--AAACCGTTCTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-CCCCCGCCG-CATCTTGGGCTCTTAGGAGCTGCTAGGAGGGCGTCCACAAGCAGG-----AAGTAAAGCCCATGGTCAGTGGGACTTTTTAGGGGAAATGGTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257267 239 - 181584905 G----TGCAGTTTTCTCCTTTTTGAAATAGTTATTAAAAACGTCGTTGAATTAAATGT--GAAGATTAGTCATACAGCCATCCTGTC-ACATCAGAAAGCATGT--AAA-CGTTCTAGTGTGTTGCTGTGATTGGTGCTGACTGAGCAGAGA-TCCCTGCCG-CATCTTGGGCTTTTAAGAGCTGCTAGGAGGGCGTTGACAAGCCAG-----AAGTAAAGCCCATGGTCAGTGGGGCTTTTTAGGGGAAATGTTA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135699 239 - 174439528 G----TGcagttttctcctttttgaaATAGTTATTAAAAACCTCGTTGAATTAAATGT--GAAGATTAGTCATACAGCCATCCTGTC-ACATCAGAAAGCATGT--AAA-CGTTCTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGA-TCCCTGCCG-CATCTTGGGCTTTTAAGAGCTGCTAGGAGGGCGTTGACAAGCCAG-----AAGTAAAGCCCATGGTCAGTGGGGCTTTTTAGGGGAAGTGTTA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89589934 239 - 91010382 G----TGCAGTTTTCTCCTTTTTGAAATAGTTATTAAAAACCTCGTTGAATTAAATGT--GAAGATTAGTCATACAGCCATCCTGTC-GCATCAGAAAGCAGGT--AAA-CGTTCTAGTGTGTTGCTGTGGCTGGTGCTGACTGAGCAGAGA-TCCCTGCCG-CTTCTTGGGCTTTTAAGAGCTGCTTGGAGGGCGTCCACAGGCAGG-----AAGTAAAGCCCATGGTCATTGGGGCATTTTAGGGGAAACGTTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 138814 197 - 204313951 G----TGCGATTTTC---------------------------TGGTTGAATTAAATGT--GAGGATTAGTCATGCACCCATCCCGTCTACATCATGTAA-ATCT--AAA-CGTTTTAGTGTGTTGCTGTGGTTGGTGCTGACTGAGCAGAGACCCCCCGCCG-CATCTTGGGCGCTTAAGAGCTGCCAGGAGGGCGTCCACAAGCAAG-----AAGTAAAGTCCGTGGTCAGTG----------------ACGGTA i calJac3.chr2 C 0 C 0 s mm10.chr13 46072141 228 - 120421639 ATGGCTGCAGTTGTCTATTTTCTGAAATAGATATTAAAATGCATGTTCAATGAAATGTTCAAGGGTTAGTTG-GCAGCTATTCTTGCAAGGCCAGAAGGCATTTTCAAACCTTGATA----ATTTCTGTGATTTGTATTTGCTGC-CACAAA-CTCCTACTTCCACCTCTATCCCTTGGGCTCTGCAAGAAGGGTTTT--------------------AAGTCC-TGATCATTGAAGCCCTTTACAGGAGATAATA i mm10.chr13 C 0 I 1179 s canFam3.chr34 30160218 206 - 42124431 G----TGCAGTTCTGTCCGTCCTGAAATAG-------AGGTCTTACCAGTTCACGTGA--GGAGGGT-------CAGCCATCCCGCCAGCGCCGGAGGACAGTT--TACAGGCTTTCACGAGTTGCTGTGGCTGGAG-----GGTGCAGAGT-CCGCGGTCG----GTGGGGTCATCGCGGTCAGCT--------GTCCCTAAGCAGACTTGCAGGTGCTCCTACCTGTCAGC---------TGAAGAGACTGAC- i canFam3.chr34 I 431 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=40027.000000 s hg38.chr3_KI270935v1_alt 29962 30 + 197351 GCTTGTGGTTGGAGAGAAGCTAGATAGAGC s panTro4.chr3 659272 30 - 202329955 GCTTGTGGTTGGAGAGAAGCTAGTTAGAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680292 30 + 202140232 GCTTGTGATTGGAGAAAAATTAGATAGAGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257506 26 - 181584905 GCTTGTGATTGGAGAAAAGC----TAGGGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135938 26 - 174439528 GCTTGTGATTGGAGAAAAGC----TAGGGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590173 26 - 91010382 GCTTGTGATTGGAGAAAAGC----TAGGGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139011 26 - 204313951 GCTTGCTATTAGAGAAGAGC----TAGGGC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30160424 28 - 42124431 GGGTGTGTTTGGGGACAAGCGGGATAGG-- i canFam3.chr34 C 0 C 0 e mm10.chr13 46072369 1179 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=110666.000000 s hg38.chr3_KI270935v1_alt 29992 57 + 197351 CAGTGCCTTTGTCCCCAA------CCCAGATGGTGCCCAGTGTTCCTTCTGCAGACTAAGGCC s panTro4.chr3 659302 57 - 202329955 CAGTGCCTTTGTCCCCAA------CCCAGATGGTGCCCAGTGTTCCTTCTGCAGACTAAGGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680322 57 + 202140232 TAGTTTCTCTGTCCTCAA------CCTAGATGGTGCCCAGTGTTCCTTCTGCAGACTAAGACC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257532 57 - 181584905 TGGTGCCTTTGTCCTTAA------CCCAGATGGTGCCCAGTGTTCCTCCTGCAGCCTCAGACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173135964 57 - 174439528 TGGTGCCTTTGTCCTTAA------CCCAGATGGTGCCCAGTGTTCCTCCTGCAGCCTCAGACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590199 57 - 91010382 TGGTGCCTTTGCTGTCAA------CCCAGATGGTGCCCAGTGTTCCTTCTGCAGCCTAAGACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139037 57 - 204313951 TAGTACCTTTGTCCTCAT------CCCGGATGGTGCCCGGTGCTCCTTCTGCAGACCAAGACC i calJac3.chr2 C 0 C 0 s mm10.chr13 46073548 52 - 120421639 CAGTGTCCTCGTCCTAGG------C-----TGGTGCTCAGTGATTCCTCTGGAGACTAAGACC i mm10.chr13 I 1179 I 2297 s canFam3.chr34 30160452 54 - 42124431 -------TCTGTCCACAGTCATCCCCCGCCTGGTGCTT--CCGTCCTCGTGCAGACTGCGACC i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=6344.000000 s hg38.chr3_KI270935v1_alt 30049 6 + 197351 CC-----------AGGC s panTro4.chr3 659359 6 - 202329955 CC-----------AGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680379 6 + 202140232 CC-----------AGGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257589 17 - 181584905 CCGCCAGCGGCGGAGGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173136021 17 - 174439528 CCGCCAGCGGCGGAGGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590256 17 - 91010382 CCGCCAGCGGCGGAGGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139094 17 - 204313951 CCACCAGCCCTGGAGGT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30160506 7 - 42124431 ----------CTCAGGC i canFam3.chr34 C 0 I 245 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=35765.000000 s hg38.chr3_KI270935v1_alt 30055 20 + 197351 ACCTCAGACCAGATGGCAAG s panTro4.chr3 659365 20 - 202329955 ACCTCAGACCAGATGGCAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680385 20 + 202140232 ACCTCAGACAAGATGGCAAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257606 20 - 181584905 ACCTCAGACAAGATGGCAAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173136038 20 - 174439528 ACCTCAGACAAGATGGCAAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590273 20 - 91010382 ACCTCAGACAAGATGGCAAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139111 20 - 204313951 GCTTCAGACAAAATGGCAAG i calJac3.chr2 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e canFam3.chr34 30160513 245 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=113501.000000 s hg38.chr3_KI270935v1_alt 30075 71 + 197351 ATAGCAAAATGGAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTT---------ATCTTGATGAAGGTAGCTTTT s panTro4.chr3 659385 71 - 202329955 ATAGCAAAATGGAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTT---------ATCTTGATGAAGGTAGCTTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680405 80 + 202140232 ATAGCAAAACGGAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTTTACAAAAAAAACTTGATGAAGGTAGTTTTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257626 69 - 181584905 ATAGCGAAATTTAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTT---------ATCT--ATGAACTTAGCTTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173136058 69 - 174439528 ATAGCGAAATTTAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTT---------ATCT--ATGAAGTTAGCTTTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590293 68 - 91010382 ATAGCAAAATTGAACCAAAATTTA---------------GTCTTGGGTTTTGTAAAAGTCTTTTT---------ATCT---TGAAGTTAGCGTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139131 84 - 204313951 ATAGCAAAATTAAACCAAAAGTTAGGCCTACCAAATATGGTCTTGTGTTTTTT--AAGTATTTTT---------ATATTGATGAAGTCAGCTTTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30160758 83 - 42124431 ATAGCAAAATTGAGCCGCCACTTAGGCCTCCTAGAAGATGCCTTTGGTCTT---AAAGTCTTTAT---------ATCTTGATGAAGATAGCTTTT i canFam3.chr34 I 245 I 1098 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=16605.000000 s hg38.chr3_KI270935v1_alt 30146 9 + 197351 CCTACAGAA s panTro4.chr3 659456 9 - 202329955 CCTACAGAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680485 9 + 202140232 GCTACAGAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257695 9 - 181584905 CCTACAGAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173136127 9 - 174439528 CCTACAGAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89590361 9 - 91010382 CCTACAGAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 139215 9 - 204313951 CCTACAGAA i calJac3.chr2 C 0 I 1138 e mm10.chr13 46073600 2297 - 120421639 I e canFam3.chr34 30160841 1098 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2548.000000 s hg38.chr3_KI270935v1_alt 30155 1 + 197351 A s panTro4.chr3 659465 1 - 202329955 A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680494 1 + 202140232 A i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180257704 1 - 181584905 A i macFas5.chr6 C 0 I 1148 s papAnu2.chr6 173136136 1 - 174439528 A i papAnu2.chr6 C 0 I 1450 s chlSab2.chr4 89590370 1 - 91010382 A i chlSab2.chr4 C 0 I 1148 s calJac3.chr2 140362 1 - 204313951 A i calJac3.chr2 I 1138 C 0 s canFam3.chr34 30161939 1 - 42124431 A i canFam3.chr34 I 1098 C 0 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=249407.000000 s hg38.chr3_KI270935v1_alt 30156 155 + 197351 GTCGTGC----GTTTTTGGGTTCTTCGTTGGCTGCTTTTGTGATTGTGTAGGCTGTACATGCAGATTCGTTTCTTGCTCAT------------GATTT-------ATAGGTGCATTTTATTCGATGAGGACCCCTTACTTTGCTAGATTTCGGATATGAATGTCTCTGCACTTGTTAC s panTro4.chr3 659466 155 - 202329955 GTCGTGC----GTTTTTAGGTTCTTCGTTGGCTGCTTTTGTGATTGTGTAGGTTGTACATGCAGATTAGTTTCTTGCTCAT------------GATTT-------ATAGGTGCATTTTATTCGATGAGGACCCCTTACTTTGCTAAATTTCTGATATGAATGTCTCTGCACTTCTTAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680495 155 + 202140232 GTCGTGC----GTTTTTAGGTTCTTCGTTGGCTGCCTTTGTGATTGTGTAGGTTGTACATGCAGATTAGTTTCTTGCTGAT------------GATTT-------ATAGGTGCATTTTATTCGATGAGGACCCCTTACTTTGCTAGATTTCGTATATTAATGTCGCTGCACTTCTTCC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180258853 150 - 181584905 GTCATGC----GTGTTTAGGTTCTTCGCTGGCTGCTTTTGTGATTGTGTGGGTTGTACATGCAGATTAGTTTCTTGCTCAT------------GATTT-------ATAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGCTAGATTTCGGA-ATTAATGTCTCTGCACTT----C i macFas5.chr6 I 1148 C 0 s papAnu2.chr6 173137587 148 - 174439528 GTCATGC----GTGTTTAGGTTCTTCGCTGGCTGCTTTTGTGATTGTATGGGTTGTACATGCAGATTAGTTTCTTGCTCAT------------GA--T-------ATAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGCTAGATTTCGGG-ATTAATGTCTCTGCACTT----C i papAnu2.chr6 I 1450 C 0 s chlSab2.chr4 89591519 154 - 91010382 GTCATGC----GTGTTTAGGTTCTTCGCTGACTGCTTTTGTGATTGTATGGGTTGTACGTGCAGATTAGTTTCTTGCTCAT------------GATTT-------ATAGTTGCATTTGATTAGATGAGGACCCCTCACTTTGGTAGATTTCGGG-ATTAATGTCTCTGCACTTCTTAC i chlSab2.chr4 I 1148 C 0 s calJac3.chr2 140363 177 - 204313951 GTCGTGCAACTATTTTTAGGCTCTTCGTTGGCTGCTCTTGTAATTGTGCAGATTGTACCTGCAGTTTAATTTCTTACCCATTTTATTAGATGAGATTTTATTTTATTAGATGTATTTTACTAGATGAGAA-CTCTTATTTTGCTAGATTTTGGATGTTAGTGTCTCTATACTTCTTAC i calJac3.chr2 C 0 I 394 s canFam3.chr34 30161940 135 - 42124431 GTCATGCAACCACTTTTAGATCCTTTATTGGCTGCTTTTCTGATTGTGT-------------AGATCAATTTCCTTTTCAT------------GATTC-------ATAGATACCTGTTACTAGATGAGGACTGTCCTCTTTGCTAGATTCCACC------CTTCTCTTCACTT----- i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=35261.000000 s hg38.chr3_KI270935v1_alt 30311 27 + 197351 TTTTCCCCCTCCACCTCCTGATTCAGT s panTro4.chr3 659621 27 - 202329955 TTTTCCCCCTCCACCTCCTGATTCAGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680650 27 + 202140232 TTTTCCCCCTCCACCTCCTAATTCAGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259003 27 - 181584905 TTTTCCCCCTCCAGCTCCTAATTCAGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173137735 27 - 174439528 TTTTCCCCCTCCAGCTCCTAATTCAGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89591673 27 - 91010382 TTTCCCCCCTCCACCTCCTAATTCAGT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30162075 22 - 42124431 TTTTCTCCCTTTTACTGTCATT----- i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e calJac3.chr2 140540 394 - 204313951 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=179341.000000 s hg38.chr3_KI270935v1_alt 30338 115 + 197351 CATCTGAAATTCTGTATTGTTAAGCAAGGTC---------TAAGTATTCCTTTTAGTTATATGTTCCCCATGTTTTTTCTTAG----------AGGAAATGTTTGATAGTTTCTCCTAAAAAA--TTAATAATTGG s panTro4.chr3 659648 116 - 202329955 CATCTGAAATTCTGTATTGTTAAGCAAGGTC---------TAAGTATTCCTTTTAGTTATATGTTCCCCATTTTTTTTCTTAG----------AGGAAATGTTTGATAGTTTCTCCTAAAAAA-ATTAATAATTGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680677 116 + 202140232 CATCTGAAATTCTGTATTGTTAAGCAAGGTC---------GAAGTATTCCTTTTAGTTATATGTTCCCCATTTTATTTCTTAG----------AGGAAATGTTTGATAGTTTCTCCTAAGAAA-ATTAATAATTGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259030 106 - 181584905 TGTCTGAAATTCCATATTGTTAAGCAAGGTC---------TAA-TATTCCTT----TTATATATTCCCCATTTT-TTTCTTAG----------AGGAAATGTTTGATAGTTTCTCCTAAAAA-----AATAATTGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173137762 110 - 174439528 TGTCTGAAATTTCATATTGTTAAGCAAGGTC---------TAA-TATTCCTT----TTATATGTTccccatttt-tttcttag----------agGAAATGTTTGATAGTTTctcctaaaaaa-attaataattgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89591700 110 - 91010382 CATCTGAAATTCTATATTGTTAAACAAAGTC---------TAA-TATTCCTT----TTATATGTTGCCAATTTT-TTTCTTAG----------AGGAAATGTTTGATAGTTTCTCCTAAAAAA-ATTAATAATTGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 140934 113 - 204313951 CGTCTGAAATTCTATATTGTTAAGCAAGGTC---------TAACTTTTCCTTTTAGTTATATGTTCCCCATT---TTTCTTAG----------AGGAAATGTTTAATAGTTTCTCCTAAAAAA-ATTAATAATTGA i calJac3.chr2 I 394 C 0 s canFam3.chr34 30162097 132 - 42124431 CACCTGTGCTTTCCTGCCATTAA--AAGGTCTGTTTCCTTTAATTTTACCTCTTAGGTAGAT-TTCCTCATTCT-TCTCTATGTTGTTCTGTTGGAAAATGCTTGAAGCTTTAACTTAAAAAATGTTAGTAAGTgg i canFam3.chr34 C 0 I 722 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=258474.000000 s hg38.chr3_KI270935v1_alt 30453 162 + 197351 C--ACAAAAGACTAGTTTTGTGTCAAAAGTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTGAAGTTGGGCTTTCCAGATTCAAAAATCTGCCCCAGATGAGATTTAGATGCAGAGGGTTAGTGTCCTTTTCCCCAGGGGGATGGCGTGATGATTTGTTC s panTro4.chr3 659764 162 - 202329955 C--ACAAAAGACTAGTTTTGTGTCAAAAGTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTGAAGTTGGGCTTTCCAGATTCAAAAATCTGCCCCAGATGAGATTTAGATGCAGAGGGTTAGTGTCCTTTTCCCCGGGGGGATGGCGTGATGATTTGTTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680793 162 + 202140232 C--ACAAAAGACTAGTTTTGTGTCAAAACTAGTTTTGAGTTTTATCTAAAGACTGACATTGGCTTAAAGTTGGGCTTTCCGAATTCAGAAATCTGCCCCAGATTAGATTTAGATGCAGAGGGTTAGTGTCCTTTTCCCCAGGGGGATGGCGTGATAATTTGTTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259136 161 - 181584905 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTTGGGCTTT-CACATTCAAAACTCTGCCCCAGATTAGATTTAGACGCAGAGGGTGAGTGTCCTTGTCCCCAAGGGGATGGCGTGATAATTTGTTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173137872 160 - 174439528 c--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTTGGGCTTT-CACATTGAAAACTCTGCCCCAGATTAGATTTAGACACAGAGGGTGAGTGTCCTTGTCCCC-AGGGGATGGCGTGATAATTTGTTC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89591810 161 - 91010382 C--ACACAAGACTAGTCTTGTGTCAAAACTAGTTTTCAGTTTTATCTAAAGACTGAAATTGGCTTAAAGTTGGGCTTT-CAAATTCAAAACTCTGCCCCAGATTAGATTTAGACGTAGAGGGTGAGTGTCCTTGTCCCCAAAGGGATGGCTTGATAATTTGTTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141047 163 - 204313951 CCAAAAAAAGATTAGTTTTGTGTCAAAACTAGTTTTCAATTTTATCTAAAGACTGAAATTGGCTTAAAGTTGGGCTTTCCAAATTCAAAAATCTCCCCCAGGTTAGA-TTAGATGCAAAGGGTCAGTGCCTTTTTCTCCAGGGGGATGGCGTAGTAATTTGTTA i calJac3.chr2 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e canFam3.chr34 30162229 722 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=178451.000000 s hg38.chr3_KI270935v1_alt 30615 112 + 197351 AAGATTGTGTTATAGTAGCTGCCCCT-TTTAAGGCAGCTGTGTGTGTGTGTGGTGGGGAGTGGGCA-----GTGTGTATTCCACATCAACATCCTAGAAAGAACGAATAAACATTTAG s panTro4.chr3 659926 112 - 202329955 AAGATTGTGTTATAGTAGCTGCCCCT-TTTAAGCCAGCTGTGTGTGTGTGTGGTGGGGGGTGGGCA-----GTGTGTATTCCACATCAACATCCTAGAAAGAACGAATAAACATTGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199680955 112 + 202140232 AAGATTGTGTTATAGTAGCTGCCCCT-TTTAAGCTAGCTCTGTGTGTGTGTGGTGGGGGGTGGGCA-----GTGTGTATTCCACATCAATATCCTAGAAAGAACAAATAAACATTTAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259297 110 - 181584905 ACAGTTGTGTTATGGGAGCTGCCCCT-TCTAAGCTGGCTCTATGTGTGTGTGGCCGGG-GCGGGCA-----GTGGGCATTCCATGTCAGCATCCTAGAAAGAACAAATAAAC-TTTAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138032 110 - 174439528 ACGGTTGTGTTATGGGAGCTGCCCCT-TCTAAGCtggccctgtgtgtgtgtggccggG-GTGGGCA-----GTGGGCATTCCACGTCAGCATCCtagaaagaacaaataaac-ttTAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89591971 111 - 91010382 ACGGTTGTGTTATGGGAGCTGCCCCT-TTTAAGCTGGCTCTGTGTGTGTGTGGCGGGG-GTGGGCA-----GTGGGTATTCCACGTCAGCATCCTAGAAAGAACAAATCAACATTTAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141210 104 - 204313951 AAGATTTTATTATAGTAGCTGCGCCT-TTTAAGCTAG--------GTCTGCGGCAGGGGTGGGGTG-----GGGGGTATTCCACATGAACATTCTAGAGAGAACAAATAAACATTTAG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30162951 118 - 42124431 aaGATTTCATGATAATAGCTGCCACTGTTGAAGCTAGCCatgtgtgtgtatgtgtgtgtatgtgtatatgtgtCCTTATTCAACATGAACATCTTAGAAAGAAGAAACAAATGCTTAG i canFam3.chr34 I 722 I 1445 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=86680.000000 s hg38.chr3_KI270935v1_alt 30727 48 + 197351 TGATCTCACTGTTTCTACTTACA------TTTGGTAT-----AATGTACTGTTTTTATT s panTro4.chr3 660038 48 - 202329955 TGATCTCACTGTTCCTACTTACA------TTTGGTAT-----AATGTACTGTTTTTATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681067 48 + 202140232 TGATCTCACTGTTTCTACTTACG------TTTGGTAT-----AATATACTGTTTTTATA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259407 48 - 181584905 TGATCTCACTGTTTCTACTTACA------GTTGGTGT-----AATACACTGTTGTTATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138142 48 - 174439528 TGATCTCACTGTTTCTAATTACA------GTTGGTGT-----AATACACTGTTGTTATT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592082 48 - 91010382 TGATCTCACTGTTTCTACTTACA------TTTGGTGT-----AATACACTGTTGTTATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141314 48 - 204313951 TGACCTCACTGTTTCTATTTACA------TTTGATAT-----AGCATACTGtttttttt i calJac3.chr2 C 0 I 283 s canFam3.chr34 30164514 59 - 42124431 TGGACTCATGGTTTCTATTTTAATTTCGGTTTGGTATTGCAAAATATACTGTTCTTTTT i canFam3.chr34 I 1445 C 0 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=235612.000000 s hg38.chr3_KI270935v1_alt 30775 171 + 197351 GGTGCTATTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTTTATTAAAATTATTTCAAAGACTTCTTTCTTAAAATATGATTTTACCATGTAAAAAATTATACTAAGGTAGAAGAATATTCGTTCT--TTCTC------ATTTTCTGAAAAAAGAAAAAACTAAATT s panTro4.chr3 660086 171 - 202329955 GGTGCTATTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTTTATTAAAATTATTTCAAAGACTTCTTTCTTAAAATATGATTTTACCATGTAAAAAATTATACTGAGGTAGAAGAATATTCGTTGT--TTCTC------ATTTTCTGAAAAAAGAAAAAACTAAATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681115 171 + 202140232 GGTGCTATTACCTATGTTAATAGGGCACTTTACAAAATTTTCAAGAACGTTTGTATTAAAATTATTTCAAAGGCTTCTTTCTTAAAATATGATTTTACCGTGTAAAAAATTATACTGAGGTAGAAGAATATTCATTCT--TTCTC------GTTTTCTGAAGAAAGTAAAAACTAAATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259455 175 - 181584905 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAACATTTATATTAAAATTATTTCAAAGACTTATTTCTTAAAATATGATTTTACCATGACAAAAATTATGTTAAAGTAGAAGAATATTTGTTCT--TTCTC--GTTTATTTTCTGAAAAAAGAAAAAACTGAATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138190 173 - 174439528 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAAAGTTTGTATTAAAATTAGTTC--AgacttctttcttaaaatatgattttactttgtcaaaaattataCTAAGGTGGAAGAATATTTgttct--ttctc--attcattttctgaaaaaagaaaaaactgaatt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592130 175 - 91010382 GGTGCTGTTACCTGTGTTAATAGGGCAGTTTACAAAAGTTTCAAGAACATTTGTATTAAAATTATTTCAAAGACTTATTTCTTAAAATATGATTTTACCATGACAAAAATTATGTTAAGGTAGAAGAATATTTGTTCT--TTCTC--ATTTATTTTCTGAAAAAAGAAAAAACTGAATT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30164573 158 - 42124431 GAAGCTAATACCTTT----ATACTGTACTTTATAAAATTTTCAAGAACATTTGTATTAAAATTCTCT----GACTTGT---TTAAGATATGATTTTACCAATTTTAAAATTATACTAAAACAGAAGAATATTCTTTTTAGTTTTTAGATTCATTTTCTGGGGAAA----------AATT i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e calJac3.chr2 141362 283 - 204313951 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=166781.000000 s hg38.chr3_KI270935v1_alt 30946 95 + 197351 AGCTTATGTCAATAAAAAC----------AGA------CTAGAAATTGGAGAAATGAAGAATAATTTTTTATCCCACATAATAAGTAATTTGTGAATTGCAAG-----TATTTCTA s panTro4.chr3 660257 95 - 202329955 AGCTTATGTCAATAAAAAC----------AGA------CTAGAAATTGGAGAAATGAAGAATAATTTTTTATCCCACATAATAAGTAATTTGTGAATTGCAAG-----TATTTCTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681286 94 + 202140232 AGCTTATGTCAATAAAAACAG--------AGA------CTAGAAATTGGAGAAAT---GAATAATTTTTTATCCCACATAATAAGTAATTTCTGAATTGCAAG-----TATTTCTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259630 97 - 181584905 AGCTTATGTCAATAAAAACAG--------AGA------CTAGAAATTGGAGAAATGGAGAATAATTTTTTATTCCACATAATAAGTAATTTCTGAATTGCAAA-----TATTTCTA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138363 95 - 174439528 aGCTTATGTCAATAAAAAC----------AGA------CTAGAAATTGGAGAAATGGAGAATAATTTTTTATCCCACATAACAAGTAATTTCTGAATTGCAAG-----TATTTCTA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592305 97 - 91010382 AGCTTATGTCAATAAAAACAG--------AGA------CTAGAAATTGGAGAAATGGAGAATAATTTTTTATTCCACATAATAAGTAATTTCTGAATTGCAAA-----TATTTCTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141645 101 - 204313951 AGCTTATGTCAATAAAAACAA--------AGAAATAGTCTAGAAATTAGAGAAATGAAGAAT--TTTTCTCTTGTACAGAATAAATAATTTCTGAATTGCAAG-----TATTTCTA i calJac3.chr2 I 283 C 0 s canFam3.chr34 30164731 107 - 42124431 GGCTTATATCGATAAAAACAAATATATTTAAA------GTTGAAATTGAAGAATTTAAGAAT-ATTGCTTTTGTCAGTTAAGATCTACTT--AGAAATCCAAGAAACTTATTTGTA i canFam3.chr34 C 0 C 0 e mm10.chr13 46073600 2297 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=33558.000000 s hg38.chr3_KI270935v1_alt 31041 16 + 197351 AATACTTGAAGACATC s panTro4.chr3 660352 16 - 202329955 AATACTTGAAGACATC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681380 16 + 202140232 AATACTTGAAGACATC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259727 16 - 181584905 AATACTTGAAGACATC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138458 16 - 174439528 AATACTTGAAGACATC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592402 16 - 91010382 AATACTTGAAGACCTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141746 16 - 204313951 AATACTTGAAGACATC i calJac3.chr2 C 0 C 0 s mm10.chr13 46075897 16 - 120421639 AATTCTTATGATCACT i mm10.chr13 I 2297 C 0 s canFam3.chr34 30164838 12 - 42124431 ----ATTGGAGCTATC i canFam3.chr34 C 0 I 332 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=102948.000000 s hg38.chr3_KI270935v1_alt 31057 50 + 197351 CCTCACATCCCCTCTTCTGATTGCTGAGTGCA--TAATTTCCTAAAGCtttt s panTro4.chr3 660368 50 - 202329955 CCTCACATCCCCTCTTCTGATTGCTGAGTGCA--TAATTTCCTAAAGCtttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681396 50 + 202140232 CCTCACGTCCCCTCTTCCGATTGCTGAGTGTA--TAATTTCCTAAAGCtttt i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259743 50 - 181584905 CCTCACATCCCCTCTTCTGATTGCTGAGTGTA--TTATTTCCTAAAGCTTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138474 50 - 174439528 CCTCACATCCCCTCTTCTGATTGCTGAGTGTA--TTATTtcctaaagctttt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592418 51 - 91010382 TCTCACATCCCCTCTTCTGATTGCTGAGTGTA-TTTATTTCCTAAAGCtttt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 141762 50 - 204313951 TCTCACATCCCCTCTTCTGATTGTTGAGTGTA--TTGTTTCCTAAAtttttt i calJac3.chr2 C 0 C 0 s mm10.chr13 46075913 52 - 120421639 CCTGACTTCCCCGTTTCTGATTACTAAGTGTACTTGACTACCTAGAACTTTT i mm10.chr13 C 0 C 0 e canFam3.chr34 30164850 332 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1047.000000 s hg38.chr3_KI270935v1_alt 31107 19 + 197351 ttttt----t--------------cttttgttttttt s panTro4.chr3 660418 17 - 202329955 ttttt-------------------cttttgtttttt- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681446 22 + 202140232 ttttcctttt--------------cttttgtttttt- i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259793 36 - 181584905 ttttttttttcttttctctctctctttttttttttt- i macFas5.chr6 C 0 I 2 s papAnu2.chr6 173138524 30 - 174439528 ttttttttct------tttctctctttttttttttt- i papAnu2.chr6 C 0 I 2 s chlSab2.chr4 89592469 19 - 91010382 tttcttttct-----------------ttttttttt- i chlSab2.chr4 C 0 I 54 s calJac3.chr2 141812 6 - 204313951 tttttt------------------------------- i calJac3.chr2 C 0 C 0 e mm10.chr13 46075965 0 - 120421639 C e canFam3.chr34 30164850 332 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=341658.000000 s hg38.chr3_KI270935v1_alt 31126 285 + 197351 ggagacattgtctcgctctgtcgcccaggccggagtacagtggcacagtctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcttcccaagtagctgggattacaggtgcccgccaccacgaccagctaatt--------tttagtagagagggggttttgccatgttggccagactggtctcgaactcctgacttcaggtgatctgcccaccttggcctccc-aaaatgctgggattacaggcatgagccaccacgcccagccCCTAAAACTA s panTro4.chr3 660435 285 - 202329955 ggagacattgtctcgctctgtcgcccaggccggagtacagtggcacagtctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcttcccaagtagctgagattacaggtgcccgccaccacgtccagctaatt--------tttagtagagagggggttttgccatgttggccagactggtcttgaactcctgacttcaggtgatctgcccaccttggcctccc-aaaatgctgggattacaggcatgagccactgcgcccagccCCTAAAACTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681468 286 + 202140232 ggagacattgtctcactctgtcgcccaggctggagtacggtggcacagtctaggcttactgcaacctctgcctcctgggttcaaggaattctcctgccttagcttcccaagtagctgggattacaggtgcccgccatcacgcccagctaatt--------tttagtagagaggggatttcgccatgttggccagactggtgtcgaactcctgacttcaggtgatccgcccaccttggcctcccaaaaatgctgggattacaggcatgagccaccgcgcccagccCCTAAAACTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180259831 285 - 181584905 ggagacattgtctcgctctgttgcccaggctggagtgcagtggcagagtctaggctcactgcaacctctgcctcctgtgttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgcccaccaccatgcccggctaatt--------tttagtagagacagggtttcgccatgttggccagactggtcttgaactcctgacttcaagtgttccacccaccttggcctccc-aaaatgctgggattacaggcaggagccaccgtgcccagccCCTAAAACTA i macFas5.chr6 I 2 C 0 s papAnu2.chr6 173138556 285 - 174439528 ggagacgttgtctcgctctgttgcccaggctggagtgcagtggcagagtctaggctctctgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgcccaccaccatgcccggctaatt--------tttagtagagacagggtttcgccatgttggccagactggtcttgaactcctgacttcaagtgttccacccaccttggcctccc-aaaatgctgggattacaggcaggagccaccgcgcccagcccctaatACTA i papAnu2.chr6 I 2 C 0 s calJac3.chr2 141818 279 - 204313951 -gagatagagtctcgctccattgcccaggctggagtgcagtgacg-------------ctgtagccactgcctcccgggttcaagccattctcctgcctcagccttccaagtagctgggattacaggtgcccgccaccacgcctggctaatttttgtgtgtttagtagagatggggttttgccgtgttggccagactggtctcgaactcctgacctcaggtaatctgcccacctcagcttccc-aaagtgctgggattacaggcataagccactgtgcccagccCCTAAAACTA i calJac3.chr2 C 0 C 0 e mm10.chr13 46075965 0 - 120421639 C e canFam3.chr34 30164850 332 - 42124431 I e chlSab2.chr4 89592488 54 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=5922.000000 s hg38.chr3_KI270935v1_alt 31411 3 + 197351 TTC s panTro4.chr3 660720 3 - 202329955 TTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199681754 3 + 202140232 TTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260116 3 - 181584905 TTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138841 3 - 174439528 TTC i papAnu2.chr6 C 0 C 0 s calJac3.chr2 142097 3 - 204313951 TTC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30165182 3 - 42124431 TTC i canFam3.chr34 I 332 C 0 e mm10.chr13 46075965 0 - 120421639 C e chlSab2.chr4 89592488 54 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=111491.000000 s hg38.chr3_KI270935v1_alt 31414 72 + 197351 TTGATGATATTTCTGAGACT---ATTCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACGTATCCCCTAA s panTro4.chr3 660723 69 - 202329955 TTTAT---ATTTCTGAGATT---ATTCA-------GTGGTCTTCTAAAATGCCACCAGCAGAATGGAAA-ACGTATCCCCTGA i panTro4.chr3 C 0 N 0 s ponAbe2.chr3 199681757 72 + 202140232 TTTATGATATTTCTGAGACT---ACTCA-------GTGGTCTTCTAAAATGCCGCCAGCAGAATGGAAA-ACATATCCCCTAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260119 72 - 181584905 TTTATGATATTTCTGAGACT---ATTCA-------GTGGTCTTCTAAAATGCAGCTAGCAGAATGGAAA-ATGTATCCTCTAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138844 72 - 174439528 TTTATGATATTTCTGAGACT---ATTCA-------GTGGTCTTCTAAAATGCACCCAGCAGAATGGGAA-ATGTATCCTCTAA i papAnu2.chr6 C 0 C 0 s calJac3.chr2 142100 72 - 204313951 TTTATGATATTTCTGAGACT---ATTCA-------GTGGTCTTCTAAAATGCAGCCAGCAGAATGGAAA-ACACATCCCCTAA i calJac3.chr2 C 0 C 0 s mm10.chr13 46075965 79 - 120421639 GGGGGGATATGTCCAAGTCT---CTTCATTATATTTTGGTCTTTTTAAGTAGAGTAAGTAAAACGAAAA-ATGTATTCTCTTA i mm10.chr13 C 0 C 0 s canFam3.chr34 30165185 76 - 42124431 TTTGTGAGATTACTAAGATTTCATTTTA-------TCCGTTCTCTAAAATGCAGTCAGCAGAATGGAAAGACATGCCTCATAA i canFam3.chr34 C 0 C 0 e chlSab2.chr4 89592488 54 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=39831.000000 s hg38.chr3_KI270935v1_alt 31486 38 + 197351 ATGGCTGGCCAACCTTAGCATATGGGACAGTGTGACCT s panTro4.chr3_GL389630_random 0 37 + 103936 ATGGCTGGCCA-CCTTAGCATATGGGACAGTGTCACCT i panTro4.chr3_GL389630_random N 0 C 0 s ponAbe2.chr3 199681829 38 + 202140232 ATGGCTGGCCAATCTTAGCATATGGGACAGTGTCACCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260191 37 - 181584905 ATGACTGGCCAACCTTAGCATAT-GGACAGTGTCACCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138916 37 - 174439528 ATGACTGGCCAACCTTAGCATAT-GGACAGTGTCACCT i papAnu2.chr6 C 0 C 0 s calJac3.chr2 142172 37 - 204313951 ATGGCTGGCCAACCTTAGCACAT-GGAGAATGTCACCT i calJac3.chr2 C 0 C 0 s mm10.chr13 46076044 31 - 120421639 ATGGCTGACTGGATT---CACACTGGACTGATTT---- i mm10.chr13 C 0 C 0 s canFam3.chr34 30165261 28 - 42124431 ---GTTGG------TTCACATAT-GAAGAATGTGGCCT i canFam3.chr34 C 0 C 0 e chlSab2.chr4 89592488 54 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=750.000000 s hg38.chr3_KI270935v1_alt 31524 1 + 197351 C s panTro4.chr3_GL389630_random 37 1 + 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199681867 1 + 202140232 C i ponAbe2.chr3 C 0 C 0 s chlSab2.chr4 89592542 1 - 91010382 C i chlSab2.chr4 I 54 C 0 s calJac3.chr2 142209 1 - 204313951 G i calJac3.chr2 C 0 C 0 s mm10.chr13 46076075 1 - 120421639 C i mm10.chr13 C 0 C 0 s canFam3.chr34 30165289 1 - 42124431 C i canFam3.chr34 C 0 I 17 e macFas5.chr6 180260228 0 - 181584905 C e papAnu2.chr6 173138953 0 - 174439528 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=43428.000000 s hg38.chr3_KI270935v1_alt 31525 27 + 197351 TCTCACACAGAGCCA--CTAAAAACTAAA s panTro4.chr3_GL389630_random 38 27 + 103936 TCTCACACAGAGCCA--CTAAAAACTAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199681868 27 + 202140232 TCTCACACAGAGCCA--CTAAAAACTAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260228 26 - 181584905 -CTCACACACAGCCG--CTAAAAACTAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138953 26 - 174439528 -CTCACACACAGCCG--CTAAAAACTAAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592543 27 - 91010382 TCTCACACACAGCCG--CTAAAAACTAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142210 27 - 204313951 TCTCACACTGAGCCA--CTGAAAACTAAA i calJac3.chr2 C 0 C 0 s mm10.chr13 46076076 29 - 120421639 ACTGACACCAGGTTAACCTTGGATATGGG i mm10.chr13 C 0 C 0 e canFam3.chr34 30165290 17 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=30441.000000 s hg38.chr3_KI270935v1_alt 31552 27 + 197351 CACTAAAACCAGTTTTCTTGAGTAAAG s panTro4.chr3_GL389630_random 65 27 + 103936 CACTAAAACCAGTTTTCTTGAGTAAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199681895 27 + 202140232 CACTAAAACCAGTTTTCATGAGTAAAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260254 12 - 181584905 CGCTAAAACCAG--------------- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173138979 27 - 174439528 CACTAAAACCAGTTTTCTTGGGTAAAG i papAnu2.chr6 C 0 I 8902 s chlSab2.chr4 89592570 12 - 91010382 CACTAAAACCAG--------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142237 27 - 204313951 CACTAAAAGCACTTTTCTTGGGTAAAG i calJac3.chr2 C 0 C 0 s mm10.chr13 46076105 26 - 120421639 GAGTTAGAGAAG-TTTCCTGAGGAAGG i mm10.chr13 C 0 C 0 s canFam3.chr34 30165307 27 - 42124431 CATTAATACTAGTTTTCTTGAATAAGT i canFam3.chr34 I 17 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=634779.000000 s hg38.chr3_KI270935v1_alt 31579 356 + 197351 GTTTCTAAGATGGAAAATTTAAGCAGTGAGATATGTCAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGCATCA-----------------------------------ACCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CCGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACCTCTTCCC------TCTGGGC----TGTCAGCCTTTA------------CTGTTCCAGGATACAGATCTCCTGATTCAGGTGTCCAGTGCCTTTTGAACT--GA--CCGCAAGCCCTCCTGGACGATTGGAACTGTAATGTGGAAAGGGCTCTGATGGAGCCGGTTAAAATGCTTCATTATTTGCAAAATACCACATACAGTAATACGATCTGGATGTCTTTCCCCTCCTCCACTAAGTAGCATAAGTGAAGA s panTro4.chr3_GL389630_random 92 355 + 103936 CTTTCTAAGATGGAAAATTTAAGCAGCGAGATATGTCAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGCAGCA-----------------------------------ACCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CCGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACCTCTTCCC------TCTGGGC----TGTCAGCCTTTA------------CTGTTCCAGGATACAGATCTCCTGATTCAG-TGTCCAGTGCCTTTTGAACT--GA--CCGCAAGCCCTCCTGGACGATTGGAGCTGTAATGTGGAAAGGGCTCTGATGGAGCCGGTTAAAATGCTTCATTATCTGCAGAATACCACATACAGTAATACAATCTGGATGTTTTTCCCCTCCTCCACTAAGTAGCATAAGTGAAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199681922 355 + 202140232 TTTTCTAAGATGGAAAATTTAAGCAGCGAGATATCTCAAGTTGTAGATGTTGGCCAGGAAAAAGCCAGCAGCA-----------------------------------GCCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CTGACATCC---TCCTGTG--TGATGAAGGGATGAC-ACCTCTTCCC------TCTGGGC----TGTCAGCTTTTA------------CTGTTCCAGGATACAGATGTCCTGATTCAG-TGTCCAGTGCCTTTTGAACT--GA--CCGCAAGCCCTCATGGACAATTGGAACTGTAATGTGGAAAGGGCTCTGATGGAGCCAGTTAAAATGCTTCATTATTTGCAAAATACCACATACAGTAAAACGATCTAGATGTCTTTCCCCTTCTCCACTAAGTTGCATAAATTAAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260266 351 - 181584905 GTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGTCAAATTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CCAGCATCC---TCCTGTG--TGATGAAGGAATGAC-ACCTCCTCCC------TCTGGGC----TGTCAGCTTTTA------------CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttgaact--ga--ccacaAGCCCTCATGGACGACTGGAACTGTAATGTGGAAAGGGCTATGCTGGAGCCAGTTAAAATGCTTCATTACTTGCAAAATACCACATACAGTAATACGATATAGATGTCTT--CCCTTCTCCACTAAGTAG-ATAAA-TAAGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173147908 353 - 174439528 GTTTCTAAGATGGAAAATTTAGGCAGCGAGATGTGTCAAGTTGTAGACATTGGCCAGGAAAAAGCCAGGAACA-----------------------------------GCCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CCAGCATCC---TCCTGTG--TGATGAAGGGATGAC-ACCTCCTCCC------TCTGGGC----TGTCAGCTTTTA------------CTGCTCCAGAATACAGATCTCCTGATTCAG-TGTCCAGTGCCTTTTGAACT--GA--CCACAAGCCCTCATGGACGACTGGAACTGTAATGTGGAAAGGGCTATGCTGGAGCCAGTTAAAATGCTTCATTATTTGCAAAATACCACATACAGTAATACGATATAGATGTCTT-CCCCTTCTCCACTAAGTAG-ATAAATTAAGA i papAnu2.chr6 I 8902 C 0 s chlSab2.chr4 89592582 354 - 91010382 GTTTCTAAGATGGAAAATTTAGGCAGCAAGATGTGTCAAATTGTAGACATTGGCCAGGAAAAAGCCAGGAGCA-----------------------------------GCCAGGCA-GGGGAGAGTGTGCAT-------------------------------------------------------CCAACATCC---TCCTGTG--TGATGAAGGGATGAC-ACCTCGTCCC------TCTGGGC----TGTCAGCTTTTA------------CTGCTCCAgaatacagatctcctgattcag-tgtccagtgccttttggact--ga--ccgcaAGCTCTCATGGACGACTGGAACTGTAATGTGGAAAGGGCTATGATGGAGCCAGTTAAAATGCTTCATTATTTGCAAAATACCACATACAGTAATACGATATAGATGTCTT-CCCCTTCTCCACTAAGTAGCATAAATTAAGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142264 353 - 204313951 TTTTCTAAGATGGAATATTTAAG--ATAACATGTGGCAAGTTGTAGACGTTGGCCAGGAAAAAGCCAGGAGCG-----------------------------------GCCAGGCAGGGGGAGAGTGTGCAT-------------------------------------------------------CTGACATCC---TCCTGTGTATGATGAAGGGATGAC-ACCTCATCTT------TCTAGGC----CATCAGCTTTTA------------ATCTTCCAGAATACAGATCT-CTGATGCAG---TCCATTGCCTCTTGAACT--GA--CCGCAAACCCTCGTGGACAATCGGAACTGTAATGTGGAAAGGGCTGTGATGGAGCCAGTTAAAATGCTTCATTATTTGCAGAATACCACATACAGTAATACAATGTAGTTGTCTTTCCCACTCTCTACTAAGTAGCATAAATTAAGA i calJac3.chr2 C 0 C 0 s mm10.chr13 46076131 318 - 120421639 ----CTAAGGGTAACCAGTCAGG--------------------------------GAGAACAGGCCTG-------------------------------------------ATCCA-TGAGAGGGTGTGTGG-------------------------------------------------------CTAAAGTCTCGGTTATATA--TGCTAAAGGCATTATGATTTCATCCCTAAGGTTAAGGGT----TACCTTGTTTCAATAAGGAGTAGCCTGTTCCAGAGGACAAGTCTCCCAGTATGC-TCTCTAGTTCATTTT---CTTAAA--ACAAAAGTCTTGAAGGACATGCAGAGAGCCAATATGGGAAGGGTTAAGATGGAGCCAGTAAAAATGCTTCA-TATTTAGAAAACACAGCA------------ATATGGATTTCTTTGCCATTCTTTACTGAGTTA-ACAGAATAATA i mm10.chr13 C 0 C 0 s canFam3.chr34 30165334 444 - 42124431 GTTTATAGAGTGGgacatttaagcca-aaccttgggagagttgtagaagttagccagggaaaggccagaggcaagtgtccagacagagggaacagcaCCGTGGAGTATGACAGACA-AGAGAGGATGTGCCTAAAGCCCAGAACAGATGTGGAGAGTGGTAAAGCAGGTCTGTGATCACCTCTGGGCCTGGAGTCC---TCACATTAAGAGTGGAGGGATGAT-CCCACTGGTG------CCTAGGCGTCACAACAAGCAATA--------GAGCCTCTTCTAGAAAACGGATCTCCCACTACAC-TGTCCAGTGCTTTTCTAAAT--GAAGCACAAAACCTTGCAGAACATGTGGTGCTCTAGGGTGAAGAG------GATGGATCCCGTAAAAGTGCTTCATTGTTTGCAAACTACCACTTTC------GCAAAATGTAAATCTTTCCCATTCTCCACTAAGAATCATAAATTCAGG i canFam3.chr34 C 0 I 225 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=31826.000000 s hg38.chr3_KI270935v1_alt 31935 21 + 197351 CTTCCCAGAGGAAGTGCGTCT s panTro4.chr3_GL389630_random 447 21 + 103936 CTTCCCAGAGGAAGTGCACCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199682277 21 + 202140232 TTTCACAGAGGAAGTGTGCCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260617 21 - 181584905 CTTTACAGAGGAAGTGTGCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173148261 21 - 174439528 CTTTACAGAGGAAGTGTGCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592936 21 - 91010382 CTTTACAGAGGAAGTGTGCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142617 21 - 204313951 CTTTACGGGGGAAATGTGCCT i calJac3.chr2 C 0 I 193 s mm10.chr13 46076449 14 - 120421639 TTCTGCAAAGCAAG------- i mm10.chr13 C 0 C 0 e canFam3.chr34 30165778 225 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=11655.000000 s hg38.chr3_KI270935v1_alt 31956 6 + 197351 TTTTCA s panTro4.chr3_GL389630_random 468 6 + 103936 TTTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199682298 6 + 202140232 TTTTCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260638 6 - 181584905 TTTTCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173148282 6 - 174439528 TTTTCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592957 6 - 91010382 TTTTCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142831 6 - 204313951 ttttca i calJac3.chr2 I 193 C 0 e mm10.chr13 46076463 0 - 120421639 C e canFam3.chr34 30165778 225 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1634261.000000 s hg38.chr3_KI270935v1_alt 31962 844 + 197351 TCTCGTATCTGAGTCAGTGAGTATCCTTTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGGGGCTCAGTCCTTCCTTGCCCCTTGGGCTGCCCTTCAGGGTTAAA------TAGAGGGTCCCAGCTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGTGAACAGTTTTCAAGGGGAAGTTTGAATTACTATCCCCCACAGCATTTGTTCCTTCAGGACAC-TAACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTGTTCACTTCACTGTTGA-AGGAACGAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGA-TTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GTAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATATGAGTCATAGACA---------TAAGGGAAAAATTTCTCAT---AGGTATCCAATGCATGCTGAAATTATTTTCAGTGTAATAATACTTAATTGCAAGTACCAATATAAACATAGATGTTAACA-TTTTTACTTGTATCTGTT-ATGTATCTATAAATTAGATTTAAATTTAGGTCAA---GTAAAGCAATAAAT-----TAA---------A--------ATGAACAGTATCTGCTGTGATAGATGATAAAA-TCCTACTGAAAAGAGGACCGTGGGGCCCTTCCGGTGTGGGTTCCTTGGTATTGAGTGTGCCTGT-TCTCTCTCTGTTGGAAA-ACT--GAAACGTGCTGAGAAGTTCTTTTCTCATAAGCTCACAATAGCGACTGAATGCTCCTTGGTACCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT s panTro4.chr3_GL389630_random 474 844 + 103936 TCTCGTATCTGAGTCAGTGAGTATCCTTTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGGGGCTCAGTCCTTCCTTGCCCCTTGGGCTGCCCTTCAGGGTTAAG------TAGAGGGTCCCAGCTGAGCTCTCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGTGAACAGTTTGCAAGGGGAAGTTTGAATTACTAtcccccacagcatctgttccttcaggacac-taaccctctggatctgtgtcttctgtgtctccagtggccaacagtgttgcaaacaggaacccgaggtgttcacttcactgttga-aggaacgaGAGGGCATCTGCTGAAGTTTCAGATTCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGA-TTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GTAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATATGAGTCATAGACA---------TAAGGGAAAAATTTCTCAT---AGGTATCCAATGCATGCTGAAATTATTTTCAGTGTAATAATACTTAATTGCAAGTACAAATATAAACATAGATGTTAACA-TTTTTACTTGTATCTGTT-ATGTATCTATAAATTAGATTTAAATTTAGGTCAA---GTAAAGCAATAAAT-----TAA---------A--------ATGAACAGTATCTGCTGTGATAGATGATAAAA-TCCTACCGAAAAGAGGACCGTGGGGCCCTTCCGGTGTGGGTTCCTTGGTATTGAGTGTGCCTGT-TCTCTCTCTGTTAGAAA-ACT--GAAACTTGCTGAGAAGTTCTTTTCTCATAAGCTCACAACAGCGACTGAATGCTCCTTGGCACCTTCTCAGGCATAA--------GCATAGGC-------------ACGGCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199682304 830 + 202140232 TTTCGCATCTGAGTCAGTGAGTATCCTGTTTGGAAACAAGCTTCATCCTGG-------TTTTCTAGAGTGCCAAGTCAGGGTGGAAAGGAGGACCTGGGGGCTCAGTCGTTCCTTGCCCCTTGGGCTGCCCTTCAGGGTTAAG------TAGAGGGTCCCAGCTGAGCTCTCTGGATGCAC-AGGAGCACCTGGATACGTCAGAAGGGGAACAGTTTGCAAGGGGAAATTTGAATTACTGTTCCCCACAGCATTTGTTCCTTCAGGACAC-TAACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAACAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGA-AGGAACACGAGGGCATCTGCTAAAGTTTCAGGTTCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGA-TTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GTAAGGATCTATA-CAGT----------------------TTGTTTT-------------------------CATATGAGTCATC-ACA---------TAGGAGAACAATTTCTCAT---AGGTATCCAATGCATGCTGAAATTATTTTCAGTGTAATACTACTTAATTGCAAGTCCAAATATAAACATAGATGTGAACA-TTTTTAC-TGTATCTCTT-ATGTATCTATAAACTAGATTTAAATTTAGGTCAA---GTAAAGCAATAAAT-----TAA---------A--------ATGAACAGTATGTGCTGTGATAGATGATAAAA-TCCTACTGAAAATAGGACCGTGGGGCCCTTCCGGTGTGGGTTCCTTGGTATTGAGTGTGCCTGT-TCTCTCTCTGTTGGAAA-ACC--GAAAC-----------TTCTTTTCTCATAAGCTCACAATAGCGACTGAATACTCCTTGGCACCTTCTCAGGCATAA--------GCATAGGC-------------AAGGCCCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180260644 843 - 181584905 TGTGGCATCTGAGTCCGTGAGTGTCCTGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTAGAGTGCTGAGTCGGGGCGGAAAGGAGGACC-GGGGGCTCCGTCCTTCCTCGCCCCTTGGGCTGCCCTTCAGGGTTAAG------TGGAGAGTCCCAGCTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACCTAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTTCCTTCAGGACAC-TAACCCTCTGCATCTGCGTCTTCTGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGATTTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATATGAGTCATAGACA---------TAAGAGAAAAATTTCTC-----AGGTGTCCAACACATGCTGAAATTATTTTCAGTGTTATAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTTACTTATATCTCTTAATGTATCTATAAACTAGATCTAAATTTAGATCAA---GTAAAGCAATAAAT-----TAA---------A--------ATGAACAGTATCTGCTGTGATAGATGATAAAATTCCTACTGAAATGAGGACTGTGGGGCCACTCAGGTGTGGGTTCCTTGGTATTTGGCGTGCCTGT---TCTCTCTGTTGGAAA-ACT--GAAACTTGCTGAGAAGTTCTTTTCTCGTAAGCTCACGATAGCGACTGAATGCTCCTTGGCAGCTTCTCAGGCATAA--------GCAGAGGC-------------GCGGCCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173148288 843 - 174439528 TGTGGTATCTGAGTCAGTGAGTGTCCTATTTGGAAACAGGCTTCATCCTGG-------TTTTCTGGAGTGCCGAGTCGGGGCGGAAAGGGGGACC-GGGGGCTCCGTCCTTCCTCACCCCTTGGGCTGCCCTTCAGGGTTAAG------TAGAGAGTCCCAGCTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGGGAACAGTTTGCAAGGGGAAGCTTAAATTACTGTCCCCCATAGCATCTGTTCCTTCAGGACAC-TAACCCTCTGCATCTGTGTCTTCTGTGTCACCAGTGGCCAGCAGTGTTGCAAACAGGAACCCGAGGTTTTCACTTCACTGTTGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGATTCCGTAAGTTCAT-GCTTTTTGTTccattataaatga-ttttt------------------------------------------------------------------------ttggc------------------------------TTGGGG--GTAAGGATCTATACCAGT----------------------TTGTTTT-------------------------CATATGAGTCATAGACA---------TAAGAGAAAAATTTCTCAT---AGGTATCCAACGCATGctgaaattattttcagtgttaTAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAGCA-TTTTTACTTATATCTCTT-ATGTATCTATAAACTAGATTTAAATTGAGATCAa---gtaaagcaataaaa-----taa---------a--------atgaacagtaTCTGCTGTGATAGATGATAAAATTCCTACTGAAATTAGGACTGTGGGGCCACTCAGGTGTGGGTTCCTTGGTATTTGGCGTGCCTGT---TCTCTCTGTTGGAAA-ACT--GAAACTTGCTGAGAAGTTCTTTTCTCGTAAGCTCACAATAGCGACTGAGTACTCCTTGGCACCTTCTCAGGCATAA--------GCACAGGC-------------GCGGCCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89592963 845 - 91010382 TGTGGTATCTGAGTCAGTGAGTATCCTGTTTGGAAACAGGCTTCATCCTGG-------TTTTCTAGAGTGCCGAGTTGGGGTGGAAAGGAGGACT-GGGGGCTCAGTCCTTCCTCGCCCCTTGGGCTGCCCTTCAGGGTTAAG------TAGAGAGTCTCAGCTGAGCTCCCTGGATGCAC-AGGAGCACCTGGGTACATAAGAAGGGGAACAGTTTGCAAGGGGAAGTTTAAATTACTGTCCCCCATAGCATCTGTTCCTTCAGGACAC-TAACCCTCTGCATCTGTGTCTTCTGTGTCACCAGTGGCCAACAGTGTTGCAAACAGGAACCTGAGGTTTTCACTTCACTATTGATGGGAACAAGAGGGCATCTGATAAAGTTTCAGATTCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGA-TTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GTAAGGATCTGTACCAGT----------------------TTCTTTT-------------------------CATATGAGTCATAGACA---------TAAGAGAAAAATTCCTCAT---AGGTATCCAACGCATGCTGAAATTATTTTCAGTGTTATAATAATCAATTGCAAGTACAAACACAAACATAGATGTTAACA-TTTTTACTTATATCTCTT-ATGTGTCTATAAACTAGATTTAAATTTAGATCAA---GTAAAGCAATAAAA-----TAA---------A--------ATGAACAGTATCTGCTGTGTTAGATGATAAAATTCCTACTGAAATTAGGACTGTGGGGCCACTCAGGTGTGGGTTCCTTGGTATTTAGTGTACCTGT-TCTCTCTCTGTTGGAAA-ACT--GAAACTTGCTGAGAAGTTCTTTTCTCGTAAGCTCACAATAGCGACTGAATACTCCTTGGCACCTTCTCAGGCATAA--------GCATAGGC-------------ATGGCCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 142837 834 - 204313951 TTTTGTATCTGAGTCAGTGAGTATCCTGTTTGGAAACACGCTTCGTCCTGA-------TTTTCTAGAGTGCTAAGTCA-GGTGGAAAGGAGGAACTGGGGACTCAGTCCTTCCTTGCCCCTTGGGCTGCCCTTCAGGGTTAAG------TAGAGGGTTCCAGCTGAACTCTCTGGATGCAC-AGGAGCCCCTGGGTACATAAAAAGGTGACCAGTTTGCAAGGCAGAATTTGAATTA-TATCCCCC-CAGCATTTGTTCCTTCAGGACAC-TGACCCTCTGGATCTGTGTCTTCTGTGTCTCCAGTGGCCAGCAGTGTCACCAACGGGAACCCGAGGTTTTCACTTCACTGTGGATGGGAACAAGAGGGCATCTGCTAAAGTTTCAGAATCCGTAAGTTCAT-GCTTTTTGTTCCATTATAAATGA-TTTTT------------------------------------------------------------------------TTGGC------------------------------TTGGGG--GGAGGGATCTATACCAGT----------------------TTGTTTC-------------------------CATATGAGTCATAGACA---------TAAGAGGAA---TTCTCA----AGGCATCCAGTGCATGCTCAAATGATTTTCAGTGTAAT-------AATTGCAGGTACAAGCATAAACATAGGTGCTAACA-TTTGTACTTATATCTTGT-ATGTATCTGTAAACTAGATTTCCATTTAGATCAA---GTAAAGCAATAAATTAAAGTAA---------A--------ATGAACAGTGTCTGCTGTGACAGATGATAAGATCCCCACTGCAGATAGGACGGTGTGGCCATGTGGGTAT---TTCTTTGGTATTCGGTGTGCGTGT-TCTCTCTCTGTTGGAAA-ACT--GAAGCTTGCTGAGAAGTTCTTTTCTCTTCTGCTCCTGATAGCAACTGAATACTCCATGGCACCTTCTCAGCTATGA--------GCATAGGC-------------ACGGCCCT i calJac3.chr2 C 0 C 0 s mm10.chr13 46076463 950 - 120421639 -----------GGTCAGT-AGTACCCTATTGGGAAACAGGCT--GTTTTGGAAAAGGCTTTCCTAGAATGCCAAGTTA-----GTAGAGAGGAC--AAGACCTAAGTCTTTGCCTCTTTCTTAGTC--------------------------AGGGTCCCAGGTAAACTTTCTACAAGAAT-GAAAACAACTTGATATATAGGAAAGTTAACAATTTAGAAGGAAAATTCTAATTCATT----CCTTCTGTTTCTGTT-CTTCAAGAC-C-TAACACTGT-----------TTATTTCCCTGCAGTGGCCAGGAACACTCCAAAAACAGACCTGCGGCTTTCACTTCTCTGTTGGTGAGAACAAGAAGGCATCAGCTAAAGTTTCAGATGCAGTAAGTTTA-------ATGCTCAATTATAAACAA-TTTTTGTttttgttttattcaagtcaatgtctcgctatgtagctctggctggcctgggatttgttatgtagatcaggctggcctcaaactcacagaaatccatctaactctgttggga--ttaaaggtgtgcaccattaagcccagctTGCAAACGTTTCTTGTTTTGAAGGATTATGATCTAATTTTAATATATTTGAATATTGGACA-----TATTTAAAGGAAAGattttttttaaaaaatattaattGTATGCTCAAAT-GTGTGTAGTGTAAT-------ACTTACAA----AAATACTAACATAAATACTGACA-TTTTTGCTGGCAAATCTT----TATC--TAAACTAAACTCTAAAT----TCAA---GTAAAGTAACAAAA-----TAAGAAAATATTA--------ATGAGCTGTATATGCTGTGATGAACTGTGGAATTCCTGCACAAAATAAGACTAT--GGCCACTGGAGTTGAGACTCCTCTGTATTTAGC---CTCTT-TTGCTTTCTGTTTAAAA-AATACGAACATTACTCACAAGTTTTTATCATATGAACTAGTAA-GGTTATAGAATATTGCTTGACAATTTCTCAGCAATAAATCTTCGCACACAGACCTTCTCCTTAAATATAAACTT i mm10.chr13 C 0 C 0 s canFam3.chr34 30166003 800 - 42124431 TCTCCTGTCTGAGTCTATGAGTGTCCTGTTTGGAAACAGGCTTCATCCTGA-AGGGATTTTCCTGGGGTGCCAAGTCT------------------------TTAGCCCTTCC------------CTAGCCTTCAGGGTTAAGTACCTCTACTTAACCCCAGCTGAGCTTTCTAGGTGAACGGGGAGCACCTGGGTACTTGAAGAGGTTGACAACTT--AAGGGGAAATTTTGGTCACTAGTCCCC--------TGTT----TAAGACACTTAGTGCTCTCCATCTGTGTCT-------CAGCAGTGGCCGGCGGCATGGCAGACAGGCACCCGCAGTTTTCACTTCACCATTGATGGGAATAAGAGGTCCTCTGCTAAAGTTTCAGATTCAGTAAGTTCACAATTTTTTGTTCCCTTATAAGTGA-TATCA------------------------------------------------------------------------TTGGC------------------------------TTAGAGGTGTAACGATCTATACCAGT----------------------TTTCAGT------------------------ATattggaataacacacagttcttatttaaaggaaaaaattctcat--------tccaatg-atgctcaaattatttttagcat-atagtacttaattg----tacaaatataagcatagttgttaacactttttgcttgcagtttgt-aggtatcta-aaaccagagtaaactttcaatcaaagcacaaaataatagaa-----tga---------aaatgacagatgaacattatttactgtgacgagtgaCA----------------TAGAACTGTGAAGCCACTCCAGTGTAGGCTCTCT-GTGTTTACCGGTCCCATCTTATTCTCTGCTGAAGACACT--AAAATGTGTTCACAGGTTGTTTTCTCATAAGCTCACAGTAGTTACTGAATGCTG-GTGGTACCTTCTCAGTCAAAC--------TCAGGGTT-------------CCATTCCT i canFam3.chr34 I 225 I 246 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=37596.000000 s hg38.chr3_KI270935v1_alt 32806 17 + 197351 GAAGTAGAGTTGTGGTC s panTro4.chr3_GL389630_random 1318 17 + 103936 GAAGTAGAGGTGTGGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683134 17 + 202140232 GAAGTAGAGTTGTGGTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180261487 17 - 181584905 GAAGTAGAGTTGTGGTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149131 17 - 174439528 GAAGTAGAGTTGTGGCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89593808 17 - 91010382 GAAGTAGAGTTGTGGTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 143671 17 - 204313951 GAGGTAGAGCTGGGGTC i calJac3.chr2 C 0 C 0 s mm10.chr13 46077413 17 - 120421639 GAAATATAGTTGTGGTC i mm10.chr13 C 0 I 504 e canFam3.chr34 30166803 246 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=12033.000000 s hg38.chr3_KI270935v1_alt 32823 6 + 197351 CTCAGT s panTro4.chr3_GL389630_random 1335 6 + 103936 CTCAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683151 6 + 202140232 CTCAGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180261504 6 - 181584905 CTCAGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149148 6 - 174439528 CTCAGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89593825 6 - 91010382 CTCAGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 143688 6 - 204313951 CTCAGT i calJac3.chr2 C 0 I 362 e mm10.chr13 46077430 504 - 120421639 I e canFam3.chr34 30166803 246 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=14964.000000 s hg38.chr3_KI270935v1_alt 32829 9 + 197351 CTGATCCCA s panTro4.chr3_GL389630_random 1341 9 + 103936 CTGATCCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683157 9 + 202140232 CTGATCCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180261510 8 - 181584905 CTGAT-CCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149154 9 - 174439528 CTGATCCCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89593831 9 - 91010382 CTGATCCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144056 9 - 204313951 CTGATCCCA i calJac3.chr2 I 362 C 0 e mm10.chr13 46077430 504 - 120421639 I e canFam3.chr34 30166803 246 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=73293.000000 s hg38.chr3_KI270935v1_alt 32838 37 + 197351 TGGAATAGA--CCCTCTACCATTCATAGAATCTGATTAT s panTro4.chr3_GL389630_random 1350 37 + 103936 TGGAATAGA--CCCTCTACCATTCATAGAATCTGATTAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683166 37 + 202140232 TGGAATAGA--CCCTCTACCATTCATAGAATCTGATTGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180261518 37 - 181584905 TGGGACAGA--CCCTCTACCATTCATAGAATCTGATTGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149163 37 - 174439528 TGGGACAGA--CCCTCTACCATTCTTAGAATCTGATTGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89593840 39 - 91010382 TGGGACAGATCCCCTCTACCATTCATAGAATCTGATTGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144065 37 - 204313951 TGGGCTAGG--CCCTCTACCATTCATAGAATCTGATTGT i calJac3.chr2 C 0 C 0 s mm10.chr13 46077934 37 - 120421639 tgtAGCAGT--CCATCTATTGTTCATGAAGTCTGACTGC i mm10.chr13 I 504 C 0 e canFam3.chr34 30166803 246 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1226498.000000 s hg38.chr3_KI270935v1_alt 32875 610 + 197351 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCTACTTC--TCCCTGCACTGTTCAGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCCAGCAGTTGCTCCTT-T-TATCTTTGTC----------AAGCTCTTTCACTGGCACAAGAGTCTTCATGTTTGGCATAGTGGAACCTGTGCTTGACAGGTGAATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGCTTTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAG-GTGCCCCACTGTGCTCCCACTCCGTGCAGGTCCCGCGCAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCTGTGC---TCCAGCCACT-----TGGCCTCTTGCTGTGCCTT----ACT--CAGCTCACCCATTCAGGG-GTCTCTCCCTGGA--GCCTCTTCCCTGGGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCATC---------------------------------------------------------------TACCCTCCC--- s panTro4.chr3_GL389630_random 1387 602 + 103936 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCTACTTC--TCCCCGCACTGTTCAGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TATGCCCAGCAGTTGCTCCTT-T-TATCTTTGTC----------AAGCTCTTTCACTGGCACAAGAGTCTTCATGTTTGGCATAGTGGAACGTGTGATTGACAGGTGAATTTTTCTTTCCCAGATTTCTGCT-------CAGTAGTGGATCATGAATTTGATGCAGTGATGGTAGGCGCTAGAAGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCCGAGGCAGAGTTTGATACAGCATGTGTTACCAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAG-GTGCCCCACTGTGCTCCCACTCCGTGCAGGTCCCGCACAGCCTCGCACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCGTGC---TCCAGCCACT-----TGGCCTCTTGCTGTGCCTT----ATT--CAGCTCACCCATTCAGGG-GTCTCTCCCTGGA--GCCTCTTCCCTGGGGACTTTGAAGGGCGGGAGCCTTGTTGTCACTCTTAATTCAGACTCCAGTCACACTTGGGTTTTCTCTGACCATC---------------------------------------------------------------TACCCTCCC--- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683203 676 + 202140232 CAGTCCCT--------------------------------------------TCTCCAGGTGC------GAATGTGCCCACTTC--TCCCCGCACTGTTCAGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCCAGCAGTTGCTTGTT-T-TATCTTTGTC----------AAGCTCTTTCACTGTCACAAGAGTCTTCATGTTTGTCATAGTGGAACATGTGATTGACAGGTGAATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGCGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCCGAGGCAGGGTTTAATACGGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGCGCAGGTAAGAGAAAG-GTGCCCCACTGTGCTCCCACTCCGTGCAGGTCCTGCACAGCCTCACACTTTCTACCTGGGCAGCCTCCTGCCTCCTCCCCGTGC---TCCAGCCACA-----TGGCCTCTTGCTGTGCCTTACTCACT--CAGCTCACCCTCTCAGGG-GTCTCTCCCTGGA--GCCTCTTCCCTGAGGACTTTGAAGGGCGGGAGACTTGTTGTCGGTCTTAATTGAGACTCCAGTCACACTTGGGTTTTCTCTGACCATCTCGCCTGCTACCCTCCCCACCCACCCCTCCTTCCCCAACACCTTCTCTGACCATCTCGCCTGGTACCCTCCC--- i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180261555 621 - 181584905 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACCTC--TCCCTGCACTGTTCAGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAGCAGTTGGTCCTT-T-TGTCTTTGTC----------AAGCTCCTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAGGTGCGTTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGATCATGAATTTGATGCGGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTCATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCGGCACAGGTAAGAGAAAG-GTGCCCCACCGTGCTCCCACTCTGTGCAGGTCCCGCACAGCCTTGCGCTTTCTACCTGGGCAgcctcctgcctcctccccatgc---tccagccaca-----tggcctcttgcTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCCCTGGA--GCCTCTTCCCTGGAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTCGGGTTTTCTTTGACCATCTCGCCTAC-------------------------------------------------------TTCCCTCCC--- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149200 618 - 174439528 CAGTCCCT--------------------------------------------TCTCCACGTGC------G-ATGTGCCCACCTC--TCCCCGCACTGTTCGGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAGCAGTTGGTCCTT-T-TGTCTTTGTC----------AAGC-CCTTCACTGTAACAAGAGTCTTCGTGGTTGGCATAGTGGAGCACGTGATTGACAggtgcatttttcttttccagatttctgcTCAGTATCCAGTAGTGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGATTTAATACAGCATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCGGCGCAGGTAAGAGAAAG-GTGCCCCACCGTGCTCCCACTCTGTGCAGGTCCCGCACAGCCTTGCGCTTTCTACCTGGgcagcctcctgcctcctccccatgC---TCCAGCCACA-----TGGCCTCTTGCTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGC--GTCTTTCCCTGGA--GCCTCTTCCCTGGAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTCGGGTTTTCTTTGACCTTCTCGCCTAc-------------------------------------------------------taccctccc--- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89593879 620 - 91010382 CAGTCCCT--------------------------------------------TCTCCACGTGC------GAATGTGCCCACTTC--TCCCTGCACTGTTCAGGG--------CTCAGCCCCAGGACAGGATGGAGG-CCCTG-----TGTGCCTAGCATTTGCTCCTT-T-TGTCTTTGTC----------AGGCTCCTTCACTGTAACAAGAGTCTTCGTGTTTGGCATAGTGGAGCACGTGATTGACAGGTGCATTTTTCTTTTCCAGATTTCTGCTCAGTATCCAGTAGCGGATCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACCACATGTGTTACAAAGCTGTTTCCTACCAGGTCACACACTGTTGCAGTGCAGGTAAGAGAAAG-GTGCCCCACCGTGCT-CCACTCTGCGCAGGTCCCGCCCAGCCTTGCGCTTTCTACCTGGGCAgcctcctgcctcctccccatgc---tccagccaca-----tgacctcttgcTGTGCCTTGCTCACT--CAGCTCACCCTCTCAGCG-GTCTTTCCCTGGA--GCCTCTTCCCTGGAGACTTGGAAGGGCTGGAGCCTTGTTGTCACTCCTAGTTGGGACTCCAGTCACACTTGGGTTTTCTTTGACCTTCTCGCCTAC-------------------------------------------------------TACCCTCCC--- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144102 616 - 204313951 CAGTCCCT--------------------------------------------TCTCCACGTGT------GGACGTGCCCACCTC--TTCCCGCACTGTTCAGTG--------CTCAGCCCCGGGACAGGATGGAGG-CCTTG-----TGGGCCTAGCAGTTGCTCCTT-T-TATCCTTTTC----------AAGCTCTTGAACT--AACCATAGTCTTCGTGTTTGGCATAGTGGAATATGCGATTGGCAGGTGAATTTTTATTTTCCAGATTTCTGCTCAGTATCCAGTAGTGGACCATGAATTTGATGCCGTGGTGGTGGGCGCTGGAGGGGCAGGC-CTGCGAGCTGCGTTTGGGCTTTCTGAGGCAGGGTTTAATACAGCATGTGTTACCAAGCTGTTTCCCACCAGGTCACACACTGTTGCAGCCCAGGTAAGAGAAAG-GTGCCCCGCCACGCTCTCACTGCCTGCATGT-CTGCCCAGCCTTGCGCCTTCCACCCGGGCGGCCTCCTGCCTCCTCCCCATGC---TTCAGCCACA-----TGGCCTCTTGCTGTGCATTGCTCTCT--CAGCT--CCCTCTCAGGG-GTTTTTGCCTGGA--GCCTCTTCCATGGGGACTTTGAAGAGCTGGAGCCTTGCTGTCACTCTTAATTGGAACTTCAGTCACAGCTGGGTTTTCTCTGACCATCTCGCCTAC-------------------------------------------------------TACCCTCCC--- i calJac3.chr2 C 0 C 0 s mm10.chr13 46077971 554 - 120421639 TGGTTCAT--------------------------------------------TGTAC-------------------CACACTTCAACACCAAGAATGCACA-----------CTCAG-ATCAGAACAGGATTGAAA-GCCTTCTTTCTGTGCACAGCAGCTATTCTTTCC-TGTGATTATT---------------------TTGTAATTATAGTCTTGATGTTTTATGAAGTTAAATATGTAACAAATAGCTGAA--TTTCCTTTTCAGATTTCTACTCAATACCCAGTGGTGGATCATGAATTTGATGCTGTGGTTGTAGGCGCTGGAGGGGCAGGC-TTGCGAGCTGCATTTGGCCTTTCTGAGGCAGGGTTTAATACTGCATGCCTTACAAAGCTCTTTCCTACCCGATCACATACTGTTGCAGCACAGGTAAGAAAAAG---GCCCTCTTTTGATACCA------ACAGATCTTGTACAGCACCACCTCTCCTA------TAATACAAAGTCTTCTTATTAAGC---TTCAGCCACAGTTGTTGGCATC---CAGTTCATCATTCATT-----CTCACTTTCCAA----GTCACTGCTGGTA--ATCTCTACCTCGGGACCATTGTGGGATTGGCACCTCATTGTTATTT----------------TCATACATGGGTCTTTTC---CCAGC---------------------------------------------------------------TGTCCTGCC--- i mm10.chr13 C 0 I 3094 s canFam3.chr34 30167049 646 - 42124431 CAGTTCCTTGCTTTGAGGCTGTACCTCTTCAGCATTTCAGCTCTTGGGGGGCTTTCCAGGTGCCGGGATGAGTGTGGTC-CCTT--TGGCAGGCCTGTTGGGGTGGGCTGCCCTCACCACATACGCCGGGTGGAGGCCCCTG-----TTTGCC--GCAGCTGCTCTTT-TGTGCCTCTTTCCGTTGTGCCTGAACTCTGCCGCTGCACCCATAGTCCC-----------------------TGGCTGACAGGTGAATTGTTCCTTTCCAGATCTCTACGCAGTACCCAGTGGTGGACCATGAATTTGATGCAGTGGTGGTAGGCGCTGGAGGGGCGGGC-TTGCGAGCTGCATTTGGCCTTTCAGAGGCTGGGTTTAACACGGCCTGCGTCACAAAGCTCTTTCCCACCAGATCACACACCGTTGCCGCCCAGGTAAGAGAAAGGGTGGTTTAGTG------------GTTTGGAACCTGCACAGCAGGGCGCAGTCTC------CTGCCACAAGCCTCCTTCCCACAACAGTACAGCCACA----TTTGTCTCCTTTTGCTCCTTGCACCCTGTCAGCTCACTCACCTTGGGTGTCTGTGCGTGTACTGCCTCCAGTCCCATGCTAGAGCCGCTCTGGAGCCTC----TCACCTCTTCTCTG--CTCCAGTTACACTCAGGTCTTCTCTGAGCACC---------------------------------------------------------------CACCTTGCCCCC i canFam3.chr34 I 246 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=15750.000000 s hg38.chr3_KI270935v1_alt 33485 7 + 197351 CACCCAC s panTro4.chr3_GL389630_random 1989 7 + 103936 CACCCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683879 7 + 202140232 CACCCAC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180262176 7 - 181584905 CACCCAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149818 7 - 174439528 cacccac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89594499 7 - 91010382 CAGCCAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144718 7 - 204313951 CACCCAC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30167695 7 - 42124431 TGCCCAC i canFam3.chr34 C 0 I 1308 e mm10.chr13 46078525 3094 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=360328.000000 s hg38.chr3_KI270935v1_alt 33492 216 + 197351 CCCTGCC------------------ACCCCAACACCTTAAGAAAAGGAGATCATCTAAAGAGGAGGATTCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCTGGTGCTGCTGTCTTCTGGGACTCTCTGAGGGGTAAGACGGTGGTGGGCACACACAGCCAAAGGAAGTAGGGGTACAGGGGAGTGCGACTC-TGAGTATGGAGTTTATTACTTGGCAGGA s panTro4.chr3_GL389630_random 1996 215 + 103936 CTCTGCC------------------ACCCCAACACCTTAAGAAAAGGAGATCATCTAAAGAGGAGGATTCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCTGTCTTCTGCGACTCTCTGAGGGGTAAGACGGTGGTGGGCACACATAGCCAAAGGAAGTAGGGGTACAGGGGAGTGCGACTC-TGAGTGTGGAGTTTATTACTTGGCAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199683886 233 + 202140232 CCCTGCCTCCCCACCCACCCCGGCTGCCCCAACACCTTGAGGAAAGGAGATCATCTAAAAAGGAGGAATCAGAAGTTAGGCTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCTGTCTTCTGGGACTCTCTGAGGGGTAAGATGGCAATGGGCACACACAACCAAAGGAAGTAGGGGTACAAGGGAGTGTGACTC-TGAGTATGGAGTTTATTACTTGGCAGGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180262183 215 - 181584905 CCCCACC------------------GCCCCAACACCTTAAGAAAAGGAGATCATCTAAAGAGGAGGAATCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGATTTTATTTGTCCCC-GTGCTGCTGTCCTCTGGGACTCTCTGAGGAGTAAGACGGTGGTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-TGAGTGTGGAGCTTATTACTTGGCAGGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173149825 215 - 174439528 ccccacc------------------gccccaACACCTTAAGAAAAGGAGATCATCTAAAGAGGAGGAGTCAGAATTTAGGGTGGGGAAGGAAAGGGCAAGGGTTTTATTTGTCCCC-GTGCTGCTGTCTTCTGGGACTCTCTGAGGAGTAAGACGGTGGTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-TTAGTGTGGAGCTTATTACTTGGCAGGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89594506 215 - 91010382 CCCCACC------------------GCCCCAACACCTTAAGAAAAGGAGATCATCTAAAGAGGAAGAATCAGAATTTAGGGTAGGGAAGGAAAGGGCAAGGGTTTTATTTGTCCCT-GTACTGCTGTCTTCTGGAACTCTCTGAGGAATAAGACGGTGGTGGGCACACACAGCCAAAGGAAGCAGGGGTACAGGGGAGTGCGACTC-TGAGTGTGGAGCTTATTACTTGGCAGGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144725 215 - 204313951 CCTCACC------------------TCCCCAACACCGTAAGAAAAGGAGATCATCTAAAGAGGAGTAATCAGAATTTAGGTTGGGGAAGAAAAGGGCAAGGGTTTCATTTGTCCCT-GTGCTGCCATCCTCTGGGACTCTCTGAGGGGTGAAATGGTGGTGGCCACAAACAGCCGAAGG-AGAGGGGGTGCCGGGAAGTGTGACTCTTGAGTGTGGAGTTTATTTCTGGGCAGGA i calJac3.chr2 C 0 C 0 e mm10.chr13 46078525 3094 - 120421639 I e canFam3.chr34 30167702 1308 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=102744.000000 s hg38.chr3_KI270935v1_alt 33708 53 + 197351 AGCACTTCTAATCTTTAACACATGCCCGTAAATGCCGTTGGGAAGATT-TGTTA s panTro4.chr3_GL389630_random 2211 53 + 103936 AGCACTTCTAATCTTTAACACATGCCCGTAAATGCCGTTGGGAAGATT-TGTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199684119 53 + 202140232 AGCACTTGTAATCTTTAACACATGCCCGTAAATGCCGTTGGGAAGATT-TGTTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180262398 53 - 181584905 AGCACTTCTGGTCTTTAAATCATGTCCGTAAATGCCATTGGGAAGATT-TGTTA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173150040 53 - 174439528 AGCACTTCTGGTCTTTAAATCACGCCCGTAAATGCCATTGGGAAGATT-TGTTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89594721 53 - 91010382 AGCACTTCTGGTCTTTAACTCACGCCCGTAAATGCCATTGGGAAGATT-TGTTA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144940 53 - 204313951 AGCACTTCTAGTCTTTAACACATGCCTGTAAATGCCTTTAGGGAGGTT-TGTta i calJac3.chr2 C 0 C 0 s canFam3.chr34 30169010 53 - 42124431 AGCACTTCTTGTCTGTAACACATGCCTGTAAATACCAGTAGCAACATTCTGTC- i canFam3.chr34 I 1308 C 0 e mm10.chr13 46078525 3094 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1447426.000000 s hg38.chr3_KI270935v1_alt 33761 695 + 197351 ATAAAATTAT-GCGGAGAGattcatggagtaccttttctgtgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggagttccctctgtctccaccacacagatgaggagactgaggctaagggaTGGAATCACTGGGTGAGTC-TGGGAGGGGTTGTGATCTGGAATCTGTCAGGCCTGGCTGCTCCTCTGCTGAGGTCAG--CCCTCACTGGGAGTCACCATGTGAGTAGCTGGCTTTCTCTGAATC---CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGGGTGCTCTGGTGGTCTGTTTCCAGT--ACAAGAGTCCTGGAAAAAATGTAAGCAGTTGAGGCAGATGTGG-CAGCCGAAAGAATG-----------------------------------------GTGATTAGCAAAGCTCACAAGAGAAGTCTTTGTCCATCATGAACTATGTATTACATGTAATAAGAAAAA--CTTCTCTTTGATGAAGTGTTG s panTro4.chr3_GL389630_random 2264 695 + 103936 ATAAAATTAT-GTGGAGAGattcatggagtaccttttctgtgccagatacgttaggtaataagcatattacaggtagcctttcactcactgctccagtcagccctt-----cctggagttccctctgtctccaccacacagatgaggagactgaggctaagggaTGGAATCACTGGGTGAGTC-TGGGAGGGGTTGTGATCTGGAATCTGTCAGGCCTGGCTGCTCCTCTGCTGAGGTCAG--CCCTCACTGGGAGTCACCGTGTGAGTAGTTGGCTTTCTCTGAATC---CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGTTGGGGGACCAGGATGCCATCCACTACGTGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGCGGGAGGCTCTGGGTGCTCTCGTGGTCTGTTTCTAGT--ACAAGAGTCCTGGAAAAAATGTAAGCAATTGAGGCAGATGTGG-CAGCCGAAAGAATG-----------------------------------------GTGATTAGCAAAGCTCACAAGAGAAGTCTTTGTCCGTCATGAAGTATGTATTACATGTAATAAGAAAAA--CTTCTCTTTGATGAAGTGTTA i panTro4.chr3_GL389630_random C 0 I 1126 s ponAbe2.chr3 199684172 695 + 202140232 ATGAAATTAT-CCGGAAAGatttgtggagtaccttttctgtgccagatatgttaggtaataagcatattacaggtagcctctcactcactgctccagtcagccctt-----cctggagctccctctgtctccaccacacagatgaggagactgaggctaagggaTGGAATCACTGGGTGAGCT-GGGAAGGGGTTGTGATCTGGAATCTGTCAGGCCTCGCTGCTCCTCTGCTGAGGTCAG--CCCTCACTGGGAGTCACTGCGTGAGTAGTTGGCTTTCTCTGAGTC---CCCCAGCGGGTGGATTTGGGCCTGGAAGACAAAGTTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGTTGGAATCAATGCTGCTCTGGGGAACATGGAGGGGGACTACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACGGAGCAGGCCCCCACTGCCATGGTCGAGGTGATGGGTGGGAGGCTGTGGGTGCTCTCGTGGTCTGTTTCTAGT--ACAAGAGTCCTGGAAAAAATGTAAGCAATGGAGGCAGATGTGG-CAGCCGAAAGAATG-----------------------------------------GTGATGAGCAAAGCTCACAAGAGAAGTCTTTGTCTGTCATGAACTATGCATTACATGTAACAAGAAAAA--CTTCTCTTTGATGAAGTGTTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180262451 697 - 181584905 ATAACATTAT-CTGGAAAGatttgttgagtaccttttctgtgccagatatgttaggtaataagcatattacaggtagcctgtcactcacggctccagtcagccctt-----cctggagttccctctgtctccaccacacagatgaggagactgaggctaagggaTTGAATCACCGGGCGAGTC-AGGGGAGGGTCGTGACCCAGAATCTGTGGGGCCTCGCTGCTCCTCTGCTGAGGTCAG--CCCTCACTGGGAGTCACCGTGTGAGGAGTTGGCTTTCTCTGAATC---CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGCTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGAGGCTCTGGGCGCCCTCGTGGTCTGTTTCTAGTCAAAAAGAGTCCTGGAAAGCATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAATG-----------------------------------------GTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCGTCACGAACTGTGCATTACACGTAACAAG-AAGA--CTTCTCTTTGATGAAGTGTTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173150093 697 - 174439528 TTAACATTAT-CTGGAAAGatttgttgagtaccttttcTGTGCCAGATATGTTAGGTAACAAGCATATTACAGGTAGCCTGTCACTCACGGCTCCAGTCAGCCCTT-----CCTGGAGTTCCCTCTGTCTCCACCACACagctgaggagactgaggctaaGGGATTGAATCACCGGGCGAGTC-AGGGGAGGGTCGTGACCCGGAATCTGTCGGGCCTCACtgctcctctgctgaggtcag--cCCTCACTGGGAGTCACTGCGTGAGGAGTTGGCTTTCTCTGAATC---CCCCAGTGGGTGGATTTGGGCCTGGAAGACAAAGGTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGGAGGAATCAATGCTGCTCTGGAGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAGGGCTCCGACTGACTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCGGGGGGCTCTGGGCGCCCTCGTGGTCTGTTCCTAGTCAAAAAGAGTCCTGGAAAGCATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAATG-----------------------------------------GTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCGTCACGAACTATGCATTACATGTAACAAG-AAGA--CTTCTCTTTGATGAAGTGTTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89594774 697 - 91010382 GTAACATTAT-CTGGAAAGatttgttgagtaccttttctgtgccagatatgttaggtaataagcatattacaggtagcctgtcactcactgctccagtcagccctt-----cctggagttccctctgtctccaccacacagctgaggagactgaggctaagggaTTGAATCACCGGGCGAGTC-GGGGGAGGGTCGTGACCCGGAATCTGTCGGGCCTCGCTGCTCCTCTGCTGAGGTCAG--CCCTCACTGGGAGTCACTGCGTGAGGAGTTGGCTTTCTCTGAATC---CCCCAGTGGGTGGATTTGGACCTGGAAGACAAAGCTGGGGCTCCTGTTTGTGGCTTGTAAGGAGTGGT-TGGTGTTTC----CAGGGAGGAATCAACGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTATGACACTATGAAGGGCTCCGACTGACTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCTCCCGCCGCCGTGGTCGAGGTGATGGGCAGGGGGCTCTGGGCGCCCTCGTGGCCTGTTTCTAGCCAAAAAGAGTACTGGAAAGAATGTAAGCAATTGAGGCAGATGTGGCCGGCCGAAAGAATG-----------------------------------------GTGATGAGCAAAGCTCACAAGAGGAGTCTTTTTCCATCACGAACTGTGCATTACACGTAACAAG-AAGA--CTTCTCTTTGATGAAGTGTTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 144993 692 - 204313951 ataaaattat-ctggaaagatttgttgagtaccttttctgtgccaggtgtgttaggtaataagcatatcacaggtagccttttgctcactgctccaatcagccctt-----cctagagttccctctgtctccaccacacagatgatgagactgaggctaagggagtgaatcactGGGCGAGTCAGGGGAGGGGTTGTGATCTGGAATCTGCCCGGCCTTGCTGCCCCTCTGCTGAGGGCAG--CTCTCCCTGGGAGTCACTGCATGAGGAG-TGGCTTTCTCTGAAT----CCCTGGTGGGTGGATTTGGGCCTGGAAGACAAAGTTGGGGCTCCTGTTTGTGGTTTGTAAGGAGTGGT-TGTTGTTAC----CAGGGAGGAATCAATGCTGCTCTGGGGAACATGGAGGAGGACAACTGGAGGTGGCATTTCTACGACACCGTGAAAGGCTCCGACTGGCTGGGGGACCAGGATGCCATCCACTACATGACAGAGCAGGCCCCTGCCGCCGTGGTCGAGGTGATGAGTGGGAGGCTGTGGGTGCTTTCGTGGTCTGTTTCGAGTACAAAAGAGTCCTGGAGAAAATGTAAGAGATTGAGGCAGATGTGGCCAGCCAAAAGAACA-----------------------------------------GTGATGAGTCAAGCTCACAAGAGAA-TCTTTTTCCGTCATGAGCGATGCAGTACATGTAACAGG-AAAA-----CTCTCTGATGAAGGGTTG i calJac3.chr2 C 0 C 0 s mm10.chr13 46081619 667 - 120421639 ATAAAATT-T-CCAGATAGATTTGTTGAACATCTTCAGT-TGTTAGGTA-GATAAACAATGGCTAAGTTACAAGGATCTTTTC---------------TAGTCTTTACAGGCCTGGAGATCAAGTAACATTCCCATTACAAAT----------------AAGAATTAAGCCATCTGTCTACTC--GGGAAGTCTCATGACTTGGAATCTGTCCTGCCTTACAGCTCCT----------TAA--CCCTCATGAAGAGTCACCACATACGGAGTTTGCTGTCCCTGAATCAGATCTGAGGGGGAGG---TGGGCTGCAGAGACTG---------------TTAAGATATGTAAGCAGTTGTATGGTATTTC----CAGGGAGGTATCAATGCTGCTCTGGGGAACATGGAAGAGGACAACTGGAGATGGCATTTCTATGACACTGTGAAAGGCTCCGACTGGCTGGGGGATCAGGATGCCATCCATTACATGACAGAGCAAGCTCCTGCCTCTGTGGTTGAGGTAACTGACGGGAAACTCT---TGTGTATGTGCTCTGCTTGTATTACAAAAGAATCAGTGTAAAAATAAAAACGGGCTGGG--GATAAGGCT--CCTGGAGAATGCATGCCTACTGCAATTGAGCTCTAGGGTCCCATCCCTGGTAATGATGAGCCA-----ATGAGGAAAGT-TTTTCCTGT----AACTATTCAGTTCATTTAAGAAG-ATAG--TTTATTCTCCCGGAATTATCA i mm10.chr13 I 3094 C 0 s canFam3.chr34 30169063 586 - 42124431 ATAAAATGatcccagacagatttgttgagtacctgttatgtgccaggt-tgggaagtgatgagcattgtg-----aacc------------ctccagttagc---------tctggagttgggcttcttgtcccttcttaggtgggaggactgaggctgaggga---------------ggtC-------------------------------------CTGTACCCCTACTGCAGTCAGGTCCCTTACAGACAGTTAGGTTGAAAGCATTTGTTTTTTTCTGAACC---CAGTTCTGGGA-----TGAGCCTAGAAGATACCACTGGGGCCTCTCCTTGTAGCTTGTAAG-----GT-TGCTGTCTCTTTGCAGGGAGGAATCAATGCTGCTCTGGGCAACATGGAGGAGGACAACTGGAGGTGGCACTTCTACGACACCGTGAAGGGCTCCGACTGGCTGGGGGACCAGGACGCCATCCACTACATGACAGAGCAGGCCCCTGCTTCTGTGGTAGAGGTAGTG----------------TCCACGCATGGTCTGTTTCTGAC--ACAAGAG----------------AGGTTTTGAGGCAGATGTGGTCAGCCCAAAGAAGG-----------------------------------------GT-ATGAGAGGGTGCAACAGGGAGA--CCCTTTCTATTGTCAACCATTCAGTTCATTTAATGAC-AAAGTTTTTCTCTTTTCTGAAGTGTTG i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1161.000000 s hg38.chr3_KI270935v1_alt 34456 2 + 197351 AC s ponAbe2.chr3 199684867 2 + 202140232 AC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263148 2 - 181584905 AC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173150790 2 - 174439528 AC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89595471 2 - 91010382 AC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 145685 2 - 204313951 AG i calJac3.chr2 C 0 C 0 s mm10.chr13 46082286 2 - 120421639 GT i mm10.chr13 C 0 C 0 s canFam3.chr34 30169649 2 - 42124431 AG i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 2959 1126 + 103936 I a score=766417.000000 s hg38.chr3_KI270935v1_alt 34458 298 + 197351 ATTTTCATAAAATAGGTTA---------------ATTT-GGGTT---TGCAGATTTGTATTAAAGTT---GTTTAGTGTAGATTAGCTGTGAATATCTTGACTCCTTTAGGGTAATAAGGCTTTTGTTTGTTTTTATCTTTCACAGGTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCGGACACAGCCTCAAGTTTGGAAAGGGCAGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTTATATGGGAGGGTAAGGCTG s panTro4.chr3_GL389630_random 4085 298 + 103936 ATTTTCATAAAATAGGTTA---------------ATTT-GGGTT---TGCAGATTTGTATTAAAGTT---GTTTAGTGTAGATTAGCTGTGAATATCTTGACTCCTTTAGGGTAATAAGGCTTTTGTTTGTTTTTATCTTTCACAGGTAGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGCAGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCAATATTGCACACCTCATATGGGAGGGTAAGGCCG i panTro4.chr3_GL389630_random I 1126 C 0 s ponAbe2.chr3 199684869 298 + 202140232 ATATTCATAAAATAGGTTA---------------CTTC-AGGTT---TGCAGATTTGTATTAAAGTT---GTTTAGTGTAGATTAGCTGTGAATATCTTGAGTCCTTTAAGGTAATAAGATTTTTGTTTGTTTTTATCTTTCAGAGCTAGAAAATTGTGCCATGCCGTTTAACAGCACTGAAGATGGGAAGATTTATCAGCATGCATTTGGTGGACAGAGCCTCAGGTTTGGAAAGGGCGGGCAGGCTCATCGGTGCTGCTGTGTGGCTGACCGGACCGGCCACTCAATATTGCACACCTTATATGGGAGGGTAAGGCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263150 298 - 181584905 ATTTTCATAAAATAGGTTA---------------CTTT-GGGTT---TGCAGATTTGTGTTAAAGTT---GTTCAGTGTAGATGAGCTATGAATATCTTGACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATTACGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCACTCACTATTGCACACCTTATATGGAAGGGTAAGGCCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173150792 298 - 174439528 ATTTTCATAAAATAGGTTA---------------CTTT-GGGTT---TGCAGATTTGTGTTAAAGTT---GTTCAGTGTAGATGAGCTATGAATATCTTGACTCCTTTAAGGtaataaggtttttgtttgtttttatctttcacAGCTGGAAAATTATGGCATGCCGTTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGATCGGACCGGCCCCTCACTATTGCACACCTTATATGGAAGGGTAAGGCCG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89595473 298 - 91010382 ATTTTCATAAAATAGGTTA---------------CTTT-GGGTT---TGCAGATTTGTGTTAAAGTT---GTTCAGTGTAGATGAGCTATGAATATCTTGACTCCTTTAAGGTAATAAGGTTTTTGTTTGTTTTTATCTTTCACAGCTGGAAAATTACGGCATGCCATTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTATGTGGCTGATCAGACTGGCCCCTCACTATTGCACACCTTATATGGAAGGGTAAGGCCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 145687 282 - 204313951 ATTTTCATAAAATACATGA---------------CTTT-GGGTT---TGCAGGTTTGTGTGAAAGCT---GTT-----TAGGTTAGCTGTGAATATCGTGACTGCTTTAAGGTAATA-----------CGTTTTTATGTTTCACAGCTAGAAAATTATGGCATGCCGTTTAGCAGAACCCAAGATGGGAAGATTTATCAGCGTGCGTTTGGTGGACAGAGCCTCAAGTTTGGAAAGGGCGGGCAGGCCCATCGGTGCTGCTGCGTGGCTGATCGGACTGGCCACTCGCTACTGCACACCTTATATGGAAGGGTAAGGCCG i calJac3.chr2 C 0 C 0 s mm10.chr13 46082288 314 - 120421639 GTTTTCATAGAATATGCTAGTATTGAAGTTTAGGTTTT-GGGTTTGGTGCAAATTTGGTACAAAAATGAGGTTTTTTGTTTGTTTGTTTTG---TTTTTTACTTGTTTAAGATAATA-TATTTTTGCTTG-TTTTGTGTTTCACAGCTAGAAAATTATGGTATGCCATTTAGCAGAACTGAAGATGGGAAGATTTATCAGCGTGCATTTGGTGGACAGAGCCTCAAGTTTGGGAAAGGCGGGCAGGCTCATCGGTGTTGCTGTGTGGCTGATCGGACAGGCCACTCACTCTTACACACGTTGTATGGAAGAGTAAGGCTG i mm10.chr13 C 0 I 440 s canFam3.chr34 30169651 293 - 42124431 ATTTTTATAGGACATATTG---------------GTTTGGGGTT---CGCAGGCTTATGTTGAAATT---GTT-ACTGTAAAGTCGCCATGAAAGTCTTGATTCCTTCCAGGTGCTAGG-----TGTTTGTTTTTGTATTTCACAGCTGGAGAATTATGGCATGCCATTTAGCAGAACTGAAGATGGAAGGATCTATCAGCGTGCTTTTGGTGGACAGAGCCTCAAGTTTGGGAAAGGCGGGCAGGCCCATCGGTGCTGCTGTGTGGCTGACCGCACTGGCCACTCGCTGCTGCACACGTTGTATGGAAGGGTGAGGCCA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=158690.000000 s hg38.chr3_KI270935v1_alt 34756 96 + 197351 CCCCCCGTCCACCTGA-GACAGGACACATAGTGCTGGGGCTTGTGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTGCGT s panTro4.chr3_GL389630_random 4383 96 + 103936 CCCTACGTCCACCTGA-GACAGGACACGTAGTGCTGGGGCTTGTGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTGCGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199685167 96 + 202140232 CCGCCGGTCCACCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCAGGGAATGGGTTAGGGTGCTCAGTGAGTCCACCAGAGATTATGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263448 96 - 181584905 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCCGCCAGAGATTATGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151090 96 - 174439528 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCATGCCCGGTGAGTCCGCCAGAGATTATGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89595771 96 - 91010382 CCCCCGGTCCAGCTGA-GACAGGACATGTAGTGCTGGGGCTTATGGTGACAGCGGGGAATGGGTTAGCGTGCCCAGTGAGTCCGCCAGAGATTATGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 145969 96 - 204313951 CCTCCAGTGCATCTGA-GATAGGACCCGTAGTGCCAGGGCTTATGGTGACAACGGGGAATGGGTTAGCGTGCCCAGTGAGTCAGCCAGAGATTATGT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30169944 63 - 42124431 CCCTGGGTGCACAGGGTGACAGGACACA------------CTCTGGTTAGGACAGG-------------CGCGCGGTGA-TAAGTTGGA-------- i canFam3.chr34 C 0 C 0 e mm10.chr13 46082602 440 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=320258.000000 s hg38.chr3_KI270935v1_alt 34852 197 + 197351 AAAAAGCAACAGAGAACAGCCGTGTGGGGCACATGCA-GCGACTGTGGATGTGACAGGAGCAGGCGT----GTGCCTTGAGAAGCTGCCCCTAAGGCAATGTGTGAGTTGTTGCCTCTATGTTGGGAAGTTGAATTGATAATCTTATATACCAGG-TTTTCACTTGGGATATGTGACACTCAGCATG-TAAGAACAGAGCAAGC s panTro4.chr3_GL389630_random 4479 197 + 103936 AAAAGGCAACAGAGAACAGCCGTGTGGGGCACATGCA-GCGACTGTGGATGTGACAGGAGCAGACAT----GTGCCTTGAGAAGCTGCCCCTAAGGCAATGTGTGAGTTGCTGCCTCTATGTTGGAAAGTTGAATTGATAATCTTATATACCAGG-TTTTCACTTGGGATATGTGACACTCAGCATG-TAAGAACAGAGCAAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199685263 197 + 202140232 AGAAAGCAACAGAGAACAGCGATGTGCGGCACATGCA-GCGACTGTTGATGTGACAGGACTAGACAT----GTGCCTTGAGGAGCTGCCCCTAAGGCAATGTGTGACTTCTTGCATCTATTTTGGAAAGTTGAATTGGTAATCTTATATACCAGG-TTTTAACTTGGGATATGTGACACTCAGCATA-TAAGAACAGAGCAGGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263544 198 - 181584905 AAAAAGCAACAGAGAACAACGGTGTAGGACACATGCA-GCGACTGTTGATGTGAAAGGACCAGGCAT----GTGCTGTGAGAAGCTGTCCCTAAGGCAATATGTTATTTCTTGTATCTATTTTGGAAAGTTGAATTGATAATCTTATATACCAGATTTTTAACTTGGGGTATGTGACACTCAACATG-TCAGAACCGAGCAAGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151186 195 - 174439528 AAAAAGCAACAGAGAACAATGGTGTAGG--ACATGCA-GCGACTGTTGATGTGAAAGGACCAGGCAT----GTGCTGTGAGAAGCTGTCCCTAAGGCTATATgttatttctt-tatctattttggAAGGTTGAATTGATAATCTTATATACTAGGTTTTTAACTTGGGATATGTGATACTCAAAATA-TTAGAACAGAgcaagc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89595867 195 - 91010382 AAAAAGCAACAGAGAACAACGGTGTAGG--ACATGCA-GCGACTGTTGATGTGAAAGGACCAGGCAT----GTGCTGTGAGAAGCTGTCCCTAAGGCAATATGTTATTTCTT-TATCTATTTTGGAAAGTTGAATTGATAATCTTATATGCTAGGTTTTTAACTTGGGATATGTGATGCTCAAAATA-TTAGAACAGAGCAAGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146065 191 - 204313951 AAAAAGCAACAGAGAACAACTGTGTAAG--ACATGCGCGGGGTTATTGATGTGAGAGTACCAGGC------GTGCTGTCAGGAGCTGTCCCTAAGGCAATACGTTATTTCTTGTATCTGTTTTGGAAAGTTGAATTGATAATCTTATATACCAGG-TTCTAACTTGGAATATGTGACATTCAGCAT----AGGACAGAACAAGC i calJac3.chr2 C 0 C 0 s mm10.chr13 46083042 184 - 120421639 aaaaattaacacaGATA------GTAAGATACCTGAA-ATAATTATTAATCTGAAAGTATTGAACAC----ATATTGTGA-AAGCTGTCTCTAAGTCAGTATGTTACTCCTTATGTCTGTATTGGAAAGTTGAGTTGGTAATCATTTC--------TTACTATTTTGAATTTGTGCTGCATAACATGCCAAGAACAGAGAAAGT i mm10.chr13 I 440 C 0 s canFam3.chr34 30170007 184 - 42124431 -------AACAGGCCACCCTGGGG------ACAGGTC-AAAA-TGTCAATGTGTCCGCCTCTGGGGTCACAGTAACTTGGTAAGATGTGTGT-AGTCATTATGAATTTAGAAGTGCCTATTTTAGAAAATTAAATTGATAATCGT-TATACCGTG-TTTGGAC-GGTGATCTGCTGCACTGCAAGTG-TAAGAACAGAAAAAGT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=2548.000000 s hg38.chr3_KI270935v1_alt 35049 1 + 197351 A s panTro4.chr3_GL389630_random 4676 1 + 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199685460 1 + 202140232 A i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263742 1 - 181584905 A i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151381 1 - 174439528 a i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596062 1 - 91010382 A i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146256 1 - 204313951 A i calJac3.chr2 C 0 C 0 s mm10.chr13 46083226 1 - 120421639 A i mm10.chr13 C 0 I 216 e canFam3.chr34 30170191 0 - 42124431 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=4200.000000 s hg38.chr3_KI270935v1_alt 35050 2 + 197351 gg s panTro4.chr3_GL389630_random 4677 2 + 103936 gg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199685461 2 + 202140232 gg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263743 2 - 181584905 GG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151382 2 - 174439528 gg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596063 2 - 91010382 gg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146257 2 - 204313951 GG i calJac3.chr2 C 0 C 0 e mm10.chr13 46083227 216 - 120421639 I e canFam3.chr34 30170191 0 - 42124431 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=191461.000000 s hg38.chr3_KI270935v1_alt 35052 177 + 197351 ccaggcacagtggcccacgtctgtaatcccagcactttaggaggccaaggcaggaggatcacttgagaccagaagtttgagaccagtctggagaacatagtgagaccctgtctctacagaaagtttaaaaagtagctgagcatggtggtacatgcttgtaatcccagttactcagga s panTro4.chr3_GL389630_random 4679 177 + 103936 ccaggcacagtggcccacgtctgtaatcccagcactttaggaggccaaggcaggaggatcnnttganaccnnaannnngaaaccnnncngganaacatagcgagaccctgtctctacaaaaagtttaaaaagtagctgagcatggtggtacatgcttgtaattccagttactcagga i panTro4.chr3_GL389630_random C 0 I 20 s ponAbe2.chr3 199685463 177 + 202140232 ccaggcacagtggcccacgtctgtaatcccagcagtttaggaggccaaggcaggaggatcacttgagaccagaagtttgaggccagtctggagaacatagcaagaccctgtctctacaaaaagtttaaaaagtagctgagcatggtggtacatgcttgtaatcccagttcctcagga i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263745 144 - 181584905 CCAGGCACAG----------------------------Aggaggccaagg-aggaggatcacttgagaccagaagtttgagaccagcctggacaacatagcaagaccctgtctctacaaaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagtt----agga i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151384 177 - 174439528 ccaggcacagtggctcacatatgtaatcccagcactttaggaggccacggcaggaggatcacttgagaccagagatttgagaccagcgtggacaacatagcgagaccctgtctgtacaaaaagtttaaaaattagttgggcatggtggtacatgcttgtaatcccagttactcagga i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596065 177 - 91010382 ccaggcacagtggctcacatctgtaatcccagcactttaggaggccacggcaggaggatcacttgagaccagaggtttgagaccagcctggacaatatagagagaccctgtctctacagaaagtttaaaaattagctgggcatggtggtacatgcttgtaatcccagttactcagga i chlSab2.chr4 C 0 C 0 e mm10.chr13 46083227 216 - 120421639 I e canFam3.chr34 30170191 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=69559.000000 s hg38.chr3_KI270935v1_alt 35229 89 + 197351 ggctgaggcaggaggatcacttgag-------------------acagtgagccatgttcataccactgcactccagcctgagcaacaggaga-cctgtctcaaaaaaa s ponAbe2.chr3 199685640 84 + 202140232 ggctgagtcaggaggatcacttgag-------------------accgtgagccgtgtttata-----gcactccagcctgggcaacaggaga-cctgtctcaaaaaaa i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180263889 107 - 181584905 ggctgaggtgggaggatcacttgagaccagga--ggttgaggctacaatgagccatgttcataccactgcactccagcctgggcaacaggagaccctgtctcaaaaaaa i macFas5.chr6 C 0 I 311 s papAnu2.chr6 173151561 105 - 174439528 ggctgaggcaggaggatcacttgagactaggatcACTTGaa---acagtgagccatgttcataccactgcactccagcctgggcaacaggaga-cctgtctcaaaaaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596242 105 - 91010382 ggctgaggcaggaggatcacttgagaccaggatcacttgaa---acagtgagccatgttcataccactgcactccagcctgggcaacaggaga-cctgtctcaaaaaaa i chlSab2.chr4 C 0 C 0 e mm10.chr13 46083227 216 - 120421639 I e canFam3.chr34 30170191 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=-484.000000 s hg38.chr3_KI270935v1_alt 35318 3 + 197351 gac-- s ponAbe2.chr3 199685724 3 + 202140232 gaa-- i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264307 5 - 181584905 gaaaa i macFas5.chr6 I 311 C 0 e mm10.chr13 46083227 216 - 120421639 I e canFam3.chr34 30170191 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e chlSab2.chr4 89596347 0 - 91010382 C e papAnu2.chr6 173151666 0 - 174439528 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=6713.000000 s hg38.chr3_KI270935v1_alt 35321 11 + 197351 aaagaac---aaGT s ponAbe2.chr3 199685727 11 + 202140232 aaagaac---aaGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264312 11 - 181584905 agaaaaa---aaGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151666 11 - 174439528 gaaaaag---aagt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596347 11 - 91010382 gaaaaag---aaGT i chlSab2.chr4 C 0 C 0 s mm10.chr13 46083443 14 - 120421639 aaagagcactaagt i mm10.chr13 I 216 C 0 e canFam3.chr34 30170191 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=61689.000000 s hg38.chr3_KI270935v1_alt 35332 45 + 197351 ATTTTAAGGCTCTTTTACC--ACCTCTGAGTTCCTGAATGGATTGGT s ponAbe2.chr3 199685738 45 + 202140232 ATTTTAAGGCTCTTTTACC--ACCTCTGAGTTCCTGAATGGATTGGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264323 47 - 181584905 ATTTTAAGGCTCTTTTACCAAACCTCTGAGTTCCTGAATGGATTGgt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151677 45 - 174439528 attttaagGCTGTTTTACC--ACCTCTGAGTTCCTGAAtgggttggt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596358 45 - 91010382 ATTTTAAGGCTGTTTTACC--ACCTCTGAGTTCCTGAATGGGTTGgt i chlSab2.chr4 C 0 C 0 s mm10.chr13 46083457 45 - 120421639 ATATTAATGTGCTTTTATC--ACCTCTAAGTTACTGAACTGATTGAT i mm10.chr13 C 0 C 0 s canFam3.chr34 30170191 41 - 42124431 ATTTTATGACTC----AGT--ACCTCTGAGTTCCTGAACTGATTGAT i canFam3.chr34 C 0 C 0 e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=10142.000000 s hg38.chr3_KI270935v1_alt 35377 12 + 197351 TTGGtttgtttg s ponAbe2.chr3 199685783 12 + 202140232 TTTGtttgtttg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264370 12 - 181584905 tttgtttgtttg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151722 12 - 174439528 tttgtttgtttg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596403 12 - 91010382 tttgtttgtttg i chlSab2.chr4 C 0 C 0 s mm10.chr13 46083502 12 - 120421639 GTATTTATCTTG i mm10.chr13 C 0 I 240 e canFam3.chr34 30170232 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=252703.000000 s hg38.chr3_KI270935v1_alt 35389 304 + 197351 ttttgt----------tttgctttgtttttgagacggagtctcactc---tcacccaggctggagtgcagtggcgcgatctctgctcactgcaacctctgcctcccgggttcaagcgattctcctgcctcagcctccagagtagctgggactacaggtgcacgccgccacgccttgctgatgttttgtattttagtagagacagggtttcccatgttgcccaggctgctcccgaactcctgagctcaggcagtccacctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacccggccATGGA s ponAbe2.chr3 199685795 306 + 202140232 ttttgt----------tttgctttgtttttgagacagagtctcactc-tgtcaccgaggctggagtgcagtggtgcgatctctgctcactgcaacctgtgcctcccgggttcaagcgattctcctgcctcagcctccagagtagctgggactacaggtgcacgccgccacgccttgctgattttttgtgttttagtagagacagggtttcccatgttgccctggctggtcccgaactcctgagctcaggcagtccacccgcctcggcctcccgaagtgctgggattataggcatgagccaccacacccggccATGGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264382 315 - 181584905 ttttgttttgttttgctttgctttgtttttgagacggactctcactc-tgtcac-caggctggagtgcagtggtgcaatctctgctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggactataagtgcacgccaccatgcctggctaattttttgtattttagtagagacagagtttcccatgttgcccaggctggtcccgaactcctgagctcaggcagtctacccgcctcggcctcccaaagtgcgaggattagaggtgtgagccaccacacccagccATGGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173151734 312 - 174439528 ttttgttttgt-----tttgctttgtttttgagatggagtctcactcttgtcacgcaggctggagtgcagtggtgcaatctctgctcactgcaacctcagccacctaggttcaagcgattctcctgcctcagcctcctgagtagctgggactataagtgcacgccaccatgcctggctaattttttgtattttagtagagacagggtttcccatgttgcccaggctggtcccgaactcctgagctcaggcagtctacccgcctcagcctcccaaagtgcggggattagaggtgtgagccaccacacctagccatgga i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596415 312 - 91010382 ttttgttttgt-----tttgctttgtttttgagacggagtctcactcttgtcacgcaggctggagtgcaatggcgcaatctctgctcactgcaacctcagccacctaggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggtgcacgccaccatgcctggctaattttttgtattttagtagagacagggtttcccatgttgcccaggctggtcccgaactcctgagctcaggcagtccacccgcctcagcctcccaaagtgcggggattagaggcatgagccaccacccccagccATGGA i chlSab2.chr4 C 0 C 0 e mm10.chr13 46083514 240 - 120421639 I e canFam3.chr34 30170232 0 - 42124431 C e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=107083.000000 s hg38.chr3_KI270935v1_alt 35693 116 + 197351 TTGTTTTCAT-ATTAACTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAGGGTCAACTTTGGCATGACCAAACAA--------------------------------TATCCTGAACAGTATTGATTCAGAG s ponAbe2.chr3 199686101 114 + 202140232 TTGTTTTAAT-ATTAAC--TTATCACTGGACAAAGACTTGAGGTGACAATAGTTCCTGGGTAATCAGGGTCCACTTTGGCATGACCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264697 116 - 181584905 TTGTTTTAAT-ATTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGGCCAAATAA--------------------------------TATTCTGAACAGTATTGATTCAGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152046 116 - 174439528 ttgttttaat-attaattgTTATCACTGGACAAAGACTTGAGGTGACAATAGTTATTGGGTAATCAAGGTCAACTTTGgcatggccaaataa--------------------------------tattctgaACAGTATTGATTCAGAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596727 148 - 91010382 TTGTTTTAAT-ATTAATTGTTATCACTGGACAAAGACTTGAGGTGACAATAGTTACTGGGTAATCAAGGTCAACTTTGGCATGACCAAATAATATTCTGAACAGTATTGATTCAGagcattcagtattctgaacagtattgattcagag i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30170232 88 - 42124431 TTGTTTTAATCCTTAACTGTTTAGACTGGACTAACACTTGGGG-GACAGTACTTACTGGATACTCAGGGCCTACTTTGGCGTAGCCAAA------------------------------------------------------------ i canFam3.chr34 C 0 C 0 e mm10.chr13 46083514 240 - 120421639 I e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=197672.000000 s hg38.chr3_KI270935v1_alt 35809 201 + 197351 TAATCCATGTTCTGAGCTTTGTTGTTTTCTGATGCATGGGGACGGATCAGTAATGTGCAGGTTGTTAGAACACCAGTGACTTCTCTGTGGCTGAGTGCATCGACAAGTGTGTGGTGGGAGGAGACGGCGGCTCCTTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGGCCCAGGCTCACGAGAGCGACTTGCGCTGGCTG-AG s ponAbe2.chr3 199686215 201 + 202140232 TAATCAATATTCCGAACTATGTTGTTTTCTGATGAATGGGGACGGATCATTAATTTGCAGGTTGTTAGAACACCAGTGACTTCTGTGTGGCTGAGTGCATCGACAAGTGTGTGGTGGGAGGAGACAGTGGCTCTGTCCGGAGCAGGAGCTGTCACGTGGGGAGCTGGCCCAGGCTTACGAGAGCAACTTGCGCTGGCTG-AG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180264813 201 - 181584905 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATAGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCTTCTCTGTGGCTGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCCGGAGCAGGAGCTGTCATGTGGGGAGCTGGCCCAGGCTTACGAGGGCAACTTGCACTGGCTG-AG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152162 201 - 174439528 TATTCAGTATTCTGAACTTTGTTGTTTTCTGATGAATGGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCTTCTCTGTGGCTGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCTGGAGCAGGAGCTGTCCTGTGGGGAGCTGGCCCAGGCTAACGAGGGCAACTCGCACCGGCTG-AG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89596875 201 - 91010382 tattcagtattcTGAACTTTGTTGTTTTCTGATGAATGGGGACAGACCATTAATTTGCAAGTTGTTAGAACACCAGTGCCTTCTCTGTGGCTGAGTGCATGGACGAGTGTGTGGTGGGAGGAGAAAGCAGCTCCGTCTGGAGCAGGAGCTGTCATGTGGGGAACTGGCCCAGGCTTACGAGGGCAACTCGCACTGGCTG-AG i chlSab2.chr4 C 0 C 0 s mm10.chr13 46083754 181 - 120421639 TAATCAATAATCTGAGCT---CTGTCTTCAGAAG-GTAGTGACAGCTGGTTAACATGAAAA-TATTAGAGCACCAGTAGGTTCCTTTAGGCTGAGTACACTGAAAAAAATATGACAGTCTG-------TGCTTATTCT---------GTGGTTGTGTTGAGAGTTTGCCTATGCTCTTTAGAGTTCCTTGTATTAACCATCA i mm10.chr13 I 240 C 0 s canFam3.chr34 30170320 172 - 42124431 TAATCAGTATTCTGAACTC--TTGATTTCC---------------ATTATTGATTAGCGAA-TGTTAGGACAGGAGTCGCTTCTCT--GGCTGCGTGCATCGACAGATATGTGACAGGAT-------CTGCCCACCCTGTGGAATTGTGTGTCACATGGGGAGCTGGC--AGTTTCATGAGGGTCCTTTGTGTTCACTG-AG i canFam3.chr34 C 0 I 151 e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=103779.000000 s hg38.chr3_KI270935v1_alt 36010 113 + 197351 GGAACGGCAGGTCCA-GGCGGGcagcgctgtccggcgcctacctttctgcg-gtgccggaatctgctcgtctgcaaccgtccgctttggtagctg--ccagccacatggggctgttg s ponAbe2.chr3 199686416 113 + 202140232 GGAACAGCAGGTCCA-GGCGGGcagcactgtccgatgcctacctttctgcg-ctgccggaatctgctcatctgcaaccgtctgctttggtagctg--ccagccacgtggggctgttg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180265014 113 - 181584905 GGAACAGCAGGTCCA-GGCGGGcagcgctgtccagtgcctacctttctgca-gtgctggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctgttg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152363 113 - 174439528 GGAACAGCAGGTCCA-GGTGGGCAGCGCTGTCCAGTGCCTACCTTTCTGCA-GTGCTGGAATCCGCTTGTCTGCAACCGTCCGCGTTGGGAGCtg--ccagccacatgtggctgttg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89597076 113 - 91010382 GGAACAGCAGGTCCA-GGCGGGcagcgctgtccagtgcctacctttctgca-gtgctggaatctgcttgtctgcaaccgtccgcgttgggagctg--ccagccacatgtggctgttg i chlSab2.chr4 C 0 C 0 s mm10.chr13 46083935 116 - 120421639 GGACTATCAAATCCACCCCTGGTAGCATTGTCCAGTGCTGACTCTACTATGTGTATGGAAATAGGCTTATCAGC-ACTGCCTACTACAGCCCCAAGTCTGGCCATACTGGGGTGTTG i mm10.chr13 C 0 I 39 e canFam3.chr34 30170492 151 - 42124431 I e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=265545.000000 s hg38.chr3_KI270935v1_alt 36123 319 + 197351 ctaatgtggcaggtgtagctgaagagctgaacgttttgacttattttaattaattaagtggttatgtgttgccagtagctcccatctgggCTGTGACCCCATGGTCTGCGGATCTCACTCTGGCACCAGACTCCGAGTGGAGCTGCATGCGGCCACCGGACAGTGTGGAGTGCCTCTTCGGGTTGTGTAGAAGTAGGAAATGTGTCACCAACATAGGAGCTGTTGCTGCTGCGTTCTCTAGCACACCTGCCTTGTTGGTACTGCTGGGCGTGGAATGCCTCTCGGGCTCTGACAGTGTCATTGACACTGTTGCTGATCT s ponAbe2.chr3 199686529 319 + 202140232 ctagtgtggctggtgtcgctgaagagctaaacgttttgatttattttaattaattaagtggttatgtgttgccagcagctcccatCTGGGCTGTGACCCCATGGTCTGTGGACCTCACTCTGGCACCAGATTCTGAGTGCAGCTACATGTGGCCACCGGACAGTGTGGAGTGCCTCTTCGGGTTGTGTAGAAATAGGAAATGTGTCACCAAAATAGGAGCTGTTGCTGCTGCGTTCTGTAGCACACCTGCCTTGTTTGTACTGCTCGGCGTGGAATGCCTCTCAGGCTCCGACAGTGTCATTGACACTGTTGCTGATCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180265127 318 - 181584905 ctaatgtggcaggtgtagctgaagagctgaaca-tttgatttattttaattaatttaGTGGTTGTGTGTTGCCAGCAGCTCCCACCTGGGCTGTGACCCCATGGTCTGTGGACCTCACTCTGGCACCAAACTCTGAGCGGAGCTGCCTGTGGCCCCCAGACAGTGTGGAGTGCCTCTTCGGGTTGTGTAGAAATAGGAAACGTGTCACCAAAGTAGGAGCTGTGGCTGCTGCGTTCTCTAGCGCACCTGCCTTGTCTGTGCTGCGCGGTGTGGAACGCCTCTCGGGCGCTGACAGCGTCCTTGACTCTGTTGCTGATCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152476 318 - 174439528 cTAATGTGGCAGGTGTAGCTGAAGAGCTGAAcg-tttgatttattttaattaatgtagtGGTTGTGTGTTGCCAGCAGCTCCCACCTGGGCTGTGACCCCATGGTCTGTGAACCTCACTCTGGCACCAAACTCTAAGTGGAGCTGCCTGTGGCCACCGGACAGTGTGGAGTGCCTCTTCGGGTTGTGTAGAAATAGGAAATAAGTCACCAAAGTAGGAGCTGTTGCTGCTGCGTTCTCTAGCGCACCTGCCTTGTCTGTGCTGCTCGGTGTGGAACACCTCTCGGGCGCTGACAGCGTCCTTGACTCTGTTGCTGATCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89597189 318 - 91010382 ctaatgtggcaggtgtagctgaagagctgaacg-tttgatttattttaattaatttaGTGGTTGTGTGTTGCCAGCAGCTCCCCCCTGGGCTGTGACCCCATGGTCTGTGGACCTCACTCTGGCACCAAACTCTGAGCGGAGCTGCCTGTGGCCACCGGACAGTGTGGAGTGCCTCTTCGGGTTGTGTAGAAATAGGAAACATGTCACCAAAGTAGGAGCTGTTGCTGCTGCGTTCTCTAGCGCACCTGCCTTGTCTGTGCTGCTCGGTGTGGAACGCCTCTCGGGCGCTGACAGCGTCCTTGACTCTGTTGCTGATCT i chlSab2.chr4 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e canFam3.chr34 30170492 151 - 42124431 I e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=33263.000000 s hg38.chr3_KI270935v1_alt 36442 32 + 197351 CCTTGGATTTACCTGGTCCATTTG----------GATCAAGT s ponAbe2.chr3 199686848 32 + 202140232 CCTTGGATTCACCTGGTTCATTTG----------GATCAAGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180265445 32 - 181584905 CCTTGGATTTACCTGGTCCATTTG----------GATCAGGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152794 32 - 174439528 CCTTGGATTTACCTGGTCCATTTG----------GATCAGGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89597507 32 - 91010382 CCTTGGATTTACCTGGTCCATTTG----------GATCAGGT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30170643 41 - 42124431 CCTAGGGTTTACACAGTCCATTTGTTACACACCAGATCAGG- i canFam3.chr34 I 151 C 0 e mm10.chr13 46084051 39 - 120421639 I e calJac3.chr2 146259 0 - 204313951 C e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=88619.000000 s hg38.chr3_KI270935v1_alt 36474 78 + 197351 TCTTTCACCTATTCACATGAGCA----------GATATCACCTTAAAACCTTAAAGGTTGGCTTAACACTT-CTTGCCCTTTTTTTTTC s ponAbe2.chr3 199686880 78 + 202140232 TCTTTCACCTGTTCACATGAGCA----------GATGGCACCTTAAAACCTTAAAGGATGGCGTAACACTT-CTTGCCCTTTTTTTTTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180265477 78 - 181584905 TCTTTCACCTATTCACACGAGCA----------AATACCACCTTAAAACCTTAAAGTTTGGCTTAACACTT-CCTGCCCTTTTTTTTCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152826 78 - 174439528 TCTTTCACCTATTCACACGAGCA----------AATACCACCTTAAAACCTTACAGGTTGGCTTAACACTT-cctgcccttttttttcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89597539 78 - 91010382 TCTTTCACCTATTCACATGAGCA----------AATACCACCTTAAAACCTTACAGGTTGGCTTAACACTT-CCTGCCCTTTGTTTTCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146259 74 - 204313951 TCTTTTGCCTATTCACATGAACA-----------ATATCACCTT-AAACCTGGAAAGCTGGCTTAACACTTACTTGCCCTTTTTT---C i calJac3.chr2 C 0 C 0 s canFam3.chr34 30170684 80 - 42124431 ------GCCTGTTCACATGAGCAGTATTGCTGAAATGTCAGTTTAACACCCTAAATGC--AATTGAAACTG-TGGGATCCTTGTTTTTC i canFam3.chr34 C 0 C 0 e mm10.chr13 46084051 39 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=480505.000000 s hg38.chr3_KI270935v1_alt 36552 252 + 197351 ------TTTCTTTTAGTCTCTGCGATATGATACCAGCTGTTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGTGGTGTCTTCGCACTGTGCATACAGGACGGGTCCATCCATCGCATAAGAGCAAAGAATACTATTGTTGCCACAGGGTAGGAATCTAATTTCTACTTTATTTC-CTTTGTAAAAATGAATAAATTTCA--------TTTAGAGTCTCTTTATTTTAAGGAAAATAG---AGGCATTGTAGA s ponAbe2.chr3 199686958 252 + 202140232 ------TTTCTTTTAGTCTCTGTGATGTGATACCAGCTGTTTTGTGGAGTATTTTGTCTTGGATCTTCTGATGGAGAACGGGGAGTGCCGTGGTGTCATTGCACTGTGCATAGAGGACGGGTCCATCCATCGCATGAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGAATCTAATTTCTACTTTATTTC-CTTTGTAAAAATGAATAAATTTCA--------TTTAGAGTTTGTTTATTTTAAGGAAAATAG---AGGCATTGTAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180265555 252 - 181584905 ------TTTCTGTTAGTCCCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATACGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACTCTAATTTCTACTTTATTTC-ATTTATAAAAATGAATAACTTTCA--------TTTAGAGTTTCTTTATTTTAATGAAAATAG---AGGCATTGTAGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173152904 252 - 174439528 ------tttcttttagtcTCTGCGATACGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGACGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCATCCATCGCATAAGAGCAAAGAACACTGTTGTTGCCACAGGGTAGGACtctaatttctactttatttc-atttataaaaatgaataactttCA--------TTTagagtttctttattttaatgaaaatag---agGCATTGTAGA i papAnu2.chr6 C 0 I 1388 s chlSab2.chr4 89597617 252 - 91010382 ------TTTCTTTTAGTCTCTGCGATATGACACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGGATGGGGAGTGCCGTGGTGTCATCGCACTGTGCATAGAGGACGGGTCCGTCCATCGCATAAGAGCAAAGAACACTGTTGTCGCCACAGGGTAGGACTCTAATTTCTACTTTATTTC-ATTTATACAAATGAATAACTGTCA--------TTTAGAGTTTCTTTATTTTAATGAAAATGG---AGGCATTGTAGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146333 251 - 204313951 ------TTTCTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTGGAGTATTTTGCCTTGGATCTCCTGATGGAGAATGGGGAGTGCCGTGGTGTGATTGCACTGTGCATAGAAGATGGGTCCATACATCGCATAAGAGCAAAGAACACTGTTGTTGCTACAGGGTAGGAAT-TAACTTTTATTTTAGTTT-GTTTATAAAAATGAATCAATTTCA--------TTTAGAGTTTCTTTATTTTAATAAAAATAG---AGGCATTGTAGA i calJac3.chr2 C 0 C 0 s mm10.chr13 46084090 249 - 120421639 ------TTTCTTACAGTCTCTGCGATATGACACCAGTTATTTTGTGGAATATTTTGCACTGGATCTTCTGATGGAAAATGGGGAGTGCCGTGGTGTCATTGCACTGTGCATAGAAGATGGGTCCATACACCGAATAAGAGCAAAAAACACTGTTATTGCTACTGGGTAGGCTTTTA--TTGTATTTAATTTC-TTATATAAAAAT---TGAGTGTCAGTATGGGGGTGGGAGTGTTTGCTTTTTTGTTAAAGTGGTTCAGG--------- i mm10.chr13 I 39 C 0 s canFam3.chr34 30170764 246 - 42124431 TTTCATGTTTTTTTAGTCTCTGCGATATGATACCAGCTATTTTGTAGAGTACTTTGCCTTGGATCTCTTGATGGAAAATGGAGAATGTCGTGGTGTTATTGCACTGTGCATAGAAGATGGGTCCATCCATCGCATAAGAGCCAAGAACACTGTTGTGGCTACCGGGTAGGAGTCTAACTTGTATTTAATTTCTGTGTAGGGAAGT---TGGGTCTCA------------------GTTTCCTTTTATAAAAATGG---AAACACTACGGA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=260652.000000 s hg38.chr3_KI270935v1_alt 36804 349 + 197351 ATAGCAGTTCAGACACAGGCCTTGATATAACCACGTGAGGGTGATGGCCTTTCCCAGCCATGGTTCCTCACCTGTAAAGGG---------TGAGGACAGCAGCACCTGCCTCGG-------------------------------------GGTGAG-----------------------------------------AAAGCATGGCCCTCATTAGTCGGTAGTGGCTGC--CGTCAGGTTC---------ACAGCGTACCTCtccc---------------------------------------gattttagat-----------gaggaaactgt-ggcccgaagagTCACATGGGGTTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTTCTATGTTTATACTGA-TTCCTGGGATAGATAAGTCTGTCTTCTCCACATAATGAAAATAAAAAACTTTAATTTTATACAGTGGCA----GTTACTTTAGCCACTTTAA s ponAbe2.chr3 199687210 349 + 202140232 ATAACGGTTCAGACACAGGCCTTGATAtaaccgtgtgagggtgatggcctttcccagccgtggttcctcacctgtaaaggg---------tgaggacagcagcacctgccTGGG-------------------------------------GGTGAG-----------------------------------------AACGCATGGCCCTCAGTAGTCGGTAGTGGCTGC--catcaggttc---------acagcttacctctccc---------------------------------------gattttagat-----------gaggaaactgc-ggcccgaagaGTCACATGGGGTTTTCTGGCAAAATCTCTCTTGT-TTTAGTGGGTTCTGTGTTTATACTGA-TTCCTGGGATAGATAAGTCTGTCTTCTCCACATAATGAAAATAAATAACTTTAATTTTATACACTGTCA----GTTACTTTAACCACTTTAA i ponAbe2.chr3 C 0 I 12 s macFas5.chr6 180265807 350 - 181584905 ATAACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTCCTCACCTGTGAAGGG---------TAAGGACGGGAGCACCTGCCTCAGG-----------------------------------CGGCGAG-----------------------------------------AAAGCATGGCCCTCAGTAGACGGCGGTGGCTGC--CGTCAGGTTC---------ACAGCTTACCTCtccc---------------------------------------gattttagat-----------gaggaaactgc-ggcccgaagagTCCCAT-GGGGTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAAGTAACTTTAATTTTATACACTGTCA----GTTACTTTAACCATTTtca i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89597869 351 - 91010382 ATAACGGTTCAGACACAGGCCTTGATATAACCTTGTGAGGGTGATGGCCTCTCCCAGCCGTGGTTGCTCCCCTGTGAAGGG---------TAAGGACGGGAGCACCTGCCTCAGG-----------------------------------CGGTGAG-----------------------------------------AAAGCATGGTCCTCAGTAGACGGGGGTGGCTGC--CATCAGGTTC---------ACagcttacctctccc---------------------------------------aattttagat-----------gcggaaactgc-ggcccgaagagTCCCATGGGGGTTTCTGGCAAAATCCCTCTTGT-TTTAGTGGGTACTGTGTTAATACTGA-TTCCTGGGATGGGTAAGTCCTTCTTCTCCACATAACGAAAATAAGTAACTTTAATTTTATACACTGTCA----GTTACTTTAACCATTTtca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146584 336 - 204313951 ATAACGGTTCAGACACAGGCCTTGACAtaaccttgtgaggatgatggcctttcccagctgtggttcctcatctgtaaacca---------tgaggacagcagcacccaccttgtg------------gga--------------------ggttgag-----------------------------------------aAAGCagggccctcaggagatgga------------------------------acagctaacccctcct---------------------------------------gactttatat-----------gaggaaactgt-ggcctaaagagTCACATGGGGTTTTCTGGCAAAAT--CTCTTGT-TTTAGTGGGTACTGTGTTTATACTGG-TACCTAGGTTGGATAACTCTTGCTTCTCCACATAATG-AAATAAGTAACTTTAATTTTATCCACTGTCAATCTGTTATTTTAACCATTTTAA i calJac3.chr2 C 0 C 0 s mm10.chr13 46084339 276 - 120421639 GCAATGGGTCAGACGTAGGCCTTCATGTCATCTCATGCAGAAGATAACCTTTCCCAGCCTTGGTACCTTTGTCACAATATAGATGTTCTCTGAGCATAATGGGGCAAAATTTGG-------------------------------------GATTAT-----------------------------------------AA------------------------------------------------------AGCTTACTTTACCT---------------------------------------GTTTTAATAT---------------AAATAGTAAGCTTAGAGAGTCACATGGTATTTTCAGATAAACT--TTCCTGC-TTTCTTGTTTACTAAGT--ATACTGA-TTCTTAGAAT--------------------CATA--------AAGTACATTTCAGTTAATAAGATTTCA--------TTTTTACCATTTTTA i mm10.chr13 C 0 C 0 s canFam3.chr34 30171010 480 - 42124431 ATAGTGGTTCAGTCCCAGGTGGTGACCTAACCCAG-GAGTATAAtaaattttgtcagcctcagttctctatctgaaaagga----------gacaatcatagcacctgccttaCTTTGCACCTGGGAGGACCCTTGAAGAAACTGGGGTTGGATgggatccctgggtggcgcagcggtttggcgcctgcctttggcccagggcgtgatcctggagacccgggatcgaatcccacatcgggctccgggtgcatggagcctgcttctccctctgcctctctctctctctcactatcataaataaataaaaatttaaaaaaaaaaaAAAAGAAAGAAACTG--GGGTTGGAGAGTCACATGACATTTTCTGGACTAACCTCTCTTTTGCTTAGTGGGTACTGTGTTTATACCAATTTTCTGGAGTAG----------TTTGTTCACATGATGAAAATAAGTAAATTCCATTTGATACACTGTTAGTCTTTTATTTTAAGCCTTTAA- i canFam3.chr34 C 0 C 0 e papAnu2.chr6 173153156 1388 - 174439528 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=4230.000000 s hg38.chr3_KI270935v1_alt 37153 3 + 197351 aag s macFas5.chr6 180266157 3 - 181584905 aag i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598220 3 - 91010382 aag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146920 3 - 204313951 AAG i calJac3.chr2 C 0 C 0 s mm10.chr13 46084615 3 - 120421639 AAG i mm10.chr13 C 0 C 0 s canFam3.chr34 30171490 3 - 42124431 AAG i canFam3.chr34 C 0 I 4 e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=7608.000000 s hg38.chr3_KI270935v1_alt 37156 24 + 197351 ttaagaagtgtcagtacagccaag s macFas5.chr6 180266160 23 - 181584905 -taaaaactgtcagtacagcgaag i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598223 23 - 91010382 -taaaagctgtcagtatagtgaag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146923 20 - 204313951 TTAAAAACTATCTGTACAAC---- i calJac3.chr2 C 0 C 0 s mm10.chr13 46084618 24 - 120421639 TTATAAgctgaaggtatatctcag i mm10.chr13 C 0 I 88 e canFam3.chr34 30171493 4 - 42124431 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=28960.000000 s hg38.chr3_KI270935v1_alt 37180 80 + 197351 aaaaaaaatcagcaaaactacagggtgggaaaaaatattttccaaaccatatatctaatgatatcttagtatctaaaata s macFas5.chr6 180266183 79 - 181584905 -gaaaaaatcagcaaaactacaggttgggaaaaaatattttccaaaccttatatctaataatattttagtatctaaaata i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598246 79 - 91010382 -gaaaaaatcagcaaaactacaggttaggaaaaaatattttccaaaccatatatctaatattatctttctacctaaaata i chlSab2.chr4 C 0 C 0 s calJac3.chr2 146943 65 - 204313951 ---------------AActataggttgggggaaaatattttcaaaaccatttgtctgataatacctcaatatctaaaata i calJac3.chr2 C 0 I 78 e mm10.chr13 46084642 88 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=300.000000 s hg38.chr3_KI270935v1_alt 37260 1 + 197351 g s macFas5.chr6 180266262 1 - 181584905 g i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598325 1 - 91010382 g i chlSab2.chr4 C 0 C 0 e mm10.chr13 46084642 88 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e calJac3.chr2 147008 78 - 204313951 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=77111.000000 s hg38.chr3_KI270935v1_alt 37261 280 + 197351 caaaaaaaaataaaaaataaaaaaaagccctact-aaaaccaacctactaaaccctactaaaaaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacatacaaatggccagttgatgtatgaaaaaatgctcaacatcaccaagcaccagagaaatgcaaattaaaaccccaatgag-tatcatctcatctcgctccagttagaatggctgttaccaagaggacaaaagatagtgagtgttgatgaggatgtggagaaaa s macFas5.chr6 180266263 264 - 181584905 -a----------------aaaaaaaaaccctact-aaaaacaacctactaaaccctactaaaaaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598326 266 - 91010382 ca----------------aaaaaacaaccctactgaaaaacaacctactaaaccctactaaaaaacaaccctactaaaaatgggcaaaggacttgaatagatatttttccag---agaagacaaacaaatggccaattgatgtatgaaaaaatgctcaacatcactaagcaccagagaaatgcaaattaaaaccccaatgagacatcatctcatctcactccaggtagaatggctgttaccaagaggacaaaagagagcaagtgttggtgaggatgtggagaaaa i chlSab2.chr4 C 0 C 0 s mm10.chr13 46084730 225 - 120421639 ------------------aaaaaaaaa--------aaagaaaaggaaagaaaGTTTA--AGTaaacaaacat-ttttaaataggtatagaacctgaatagatg--tttccaggttggagggaatacacatggtcagcaaatttatg--aaagtgctcagcaccattgaacatctggagaattcaagtaacatccataTTTGTGC-----------------------GGATGGTTAATGTAATGAT----ACAGATGGTAAATGTTGATGAAGATGTAGAGGAAA i mm10.chr13 I 88 I 2036 e canFam3.chr34 30171493 4 - 42124431 I e calJac3.chr2 147008 78 - 204313951 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=119762.000000 s hg38.chr3_KI270935v1_alt 37541 491 + 197351 gggaaccctgtgtgctgttggtgggaatgtaaattagtacaactattgtggaaaactctggaggttcctcaaaagtcacaggactaccatgtgctccagcaacctcatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggacccccatgttcattgcagcgttattcacaatacccgagatatggaaacaacctaaaaat-ttttggtgtttaatgacaatgtggtgtgtgtacacaactgaatattattcagctatgaaaacgaaggaaatcctgtcatgtgtgacaacgtggatgaacccaaagtcattatgttaagtgaaacgacccaggcacagaaagacagatactgcatgtcactcatatgtgg-atctaaaactgtcacaactcacagaaacagaataggacagtggttgccaggggctgggggaatgcagactgtggcgatgctgattaaaggtgtaacttccc s macFas5.chr6 180266527 492 - 181584905 ggg-accctgtgtgctgttggggggaatgtaaattagtacaactattgtggaaaactctggaggttcctcagaattcacaggactaccatgtgctccagcaaccccatttctgggtgtatatccaaagggcatgaaatcagaagctcaaagagacacctggacccccatgttcattgcagcgttgttcacagttcccgagatatggaaaaaacctaagtatgtgttggtgtttaaggaaaatgtggtgtgtatacgcaactgaatattactcagctatgaaaatgaagggaatcctgtcatttgtgacaacagggatgaacccaaagtcattatgttaagtgaaacaagccaggcacagaatgacagatactgcatgtcacttatatgtggaatctaaaaaagtcaaaactcatggaaacagagtaggacggtggttgccaggggctgggggaatgcagactgcagcgatgctgatgaaaggtgtgacttctc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89598592 490 - 91010382 gggaaccctgtgtgctgttggggggaatgtaaattagtacaactattgtggaaaactctggaggttcctcagaattcacaggactaccatgtgctccagcaaccccatttctgggtgtatattcaaagggcatgaaatcagaagctcaaagagacgcctggacccccatgttcattgcagcgttgttcacagttcccaagatgtggaaaaaacctaaatatgtgttgatgtttaaggaaaat---gtgtgtatacgcagctgaatattactcagctatgaaaacgaagggaatctcgtcatttgtgacaagagggatgaacccaaagtcattacgttaagtaaaacaagccaggcacagaatgacagataccgcatgtcacttctatgtggaatctaaaaaagtcaaaactcatagaaacagagtaggacagtggttgccaggggctgggggaatgcagactgcagcgatgctgatgaaaggtatgacttctc i chlSab2.chr4 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e calJac3.chr2 147008 78 - 204313951 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=10690.000000 s hg38.chr3_KI270935v1_alt 38032 28 + 197351 gtcacaaggtgaagttctgaaggtctga s macFas5.chr6 180267019 28 - 181584905 gttaccaggtgaggttcagaagttctaa i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89599082 28 - 91010382 gttaccaggtgaggttcagaaggtctaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147086 28 - 204313951 gttATaagatgaagttctgaagagctaa i calJac3.chr2 I 78 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e papAnu2.chr6 173153156 1388 - 174439528 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=17749.000000 s hg38.chr3_KI270935v1_alt 38060 28 + 197351 taaacagcatggtggctagagttaatgt s macFas5.chr6 180267047 28 - 181584905 tatacaacatggtggctatagtgaatat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173154544 28 - 174439528 TATACAGCACGGTCGCTAGAGTGAATAT i papAnu2.chr6 I 1388 C 0 s chlSab2.chr4 89599110 28 - 91010382 tatacaacatggtggctatagtgaatat i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147114 27 - 204313951 catacaacatgg-ggctatagttaataT i calJac3.chr2 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=68022.000000 s hg38.chr3_KI270935v1_alt 38088 75 + 197351 ----tatagagcatggtggccagagttaacat----tatacagcatggtggctacagttaaaat----catacagtacggtggctat s rheMac3.chr6 1054 75 + 180491593 ----TATACAGCATGGTGGCTAGAGTTAACAT----TATACAGCATGGCGGCTATAGTTAAtat----tatacgacacggtagctag i rheMac3.chr6 N 0 C 0 s macFas5.chr6 180267075 75 - 181584905 ----taTACAGCACGGTGGCTACAGTTAACAT----TATACAGCACGGTGGCTATAGTGAATAT----TATACAGCATGGTGGCTAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173154572 75 - 174439528 ----TATACAGCACGGTGGCTAGAGTTAACAT----TATACAGCATGGGGGCTATAGTTAATAT----TATACGACACGGTAGCTAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89599138 75 - 91010382 ----tatacagtaCGGTGGCTACAGTTAACAT----TATACAGCATGGTGGCTATAGTGAATGT----TATACAGCACGGTGGCTAT i chlSab2.chr4 C 0 I 1502 s calJac3.chr2 147141 84 - 204313951 CTAACGTACAACATGG-GGCTATAGTTAATATCTAACGTACAACATGG-GGCTATAGTTAATatctaacgtacaacatga-ggctat i calJac3.chr2 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=9715.000000 s hg38.chr3_KI270935v1_alt 38163 9 + 197351 cattaatat s rheMac3.chr6 1129 9 + 180491593 agttaatat i rheMac3.chr6 C 0 I 3 s macFas5.chr6 180267150 9 - 181584905 AGTGAATAT i macFas5.chr6 C 0 I 1272 s papAnu2.chr6 173154647 9 - 174439528 AGTTAATAT i papAnu2.chr6 C 0 I 3 s chlSab2.chr4 89600715 9 - 91010382 agttaatat i chlSab2.chr4 I 1502 I 3 s calJac3.chr2 147225 9 - 204313951 agttaatat i calJac3.chr2 C 0 I 4 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=46449.000000 s hg38.chr3_KI270935v1_alt 38172 69 + 197351 aacttgaaatttgcgaagagagtagaccttaggtgtctgtatctccaaaaaaaaggataattgtatgag s rheMac3.chr6 1141 68 + 180491593 aacttgaaatttgcaaacagagtagaccttaagcgtctgtatctccaaaaaaat-gataagtgtatgag i rheMac3.chr6 I 3 C 0 s papAnu2.chr6 173154659 68 - 174439528 AACTTGAAATTTGCGAACAGAGTAGACCTTAAGCGTCTGTATCTCCaaaaaaaC-GATAATTgtatgag i papAnu2.chr6 I 3 C 0 s chlSab2.chr4 89600727 68 - 91010382 aacttgaaatttgcgaacagagtagaccttaagcgtctatatctccaaaaaaac-gataattgtatgag i chlSab2.chr4 I 3 C 0 s calJac3.chr2 147238 68 - 204313951 aactttagatttgctaa-ggtgtagactgtaggtgtccatatctccagaaaaaaggataattagatgag i calJac3.chr2 I 4 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e macFas5.chr6 180267159 1272 - 181584905 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=134914.000000 s hg38.chr3_KI270935v1_alt 38241 137 + 197351 gtgatagatgtgtattaagttgattgtgtcatcagttcacaaaat-----aaatcatcacgctgtacaccttaaatatatacagtat--tgttttttg-tttaattcatcaatcatacctcagtaaatctgggggaaaaaAA-CAA s rheMac3.chr6 1209 144 + 180491593 gtgatagatgtgtattaatttgattgtgtcatcagttcacaaaatatatcaaatcatcacattgtacaccttaaatatatacggttttgtttttttttttttaattcatcaatcatacttcagtaaattggggggaaaaaA--CAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180268431 138 - 181584905 gtgatagatgtgtattaatttgattgtgtcatcagttcacaaaatatatcaaatcatcacattgtacaccttaaatatatacggtt---tttttttttttttaattcatcaatcatacttcagtaaaTTGGGGGGGAAA-----AA i macFas5.chr6 I 1272 C 0 s papAnu2.chr6 173154727 144 - 174439528 gtgatggatgtgtatTAACTTGATTGTGTCATCAGTTCACAaaatatatcaaatcatcacattgtacaccttaaatatgtacacttt--tgttttttattttaattcatcaaTCATACCTCAGTaaatctggggggaaaaaagcaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89600795 144 - 91010382 gtgatggatgtgtattaacttgattgtatcatcagttcacaaaatatatcaaatcatcacattgtacaccttaaatatatgcacttt--tgttttttattttaattcatcaatcatacctcagtaaatctgggggaaaaaAAGCAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147306 125 - 204313951 gtaatagatgtg--ttaattaacttgtgtcttcagttcacaaaatatatgaaatca--------tgtaccttaaatatatacaggtt--ttt-------tttaattcatcaattatacctcagtacatctggggaaaAAAA--CAA i calJac3.chr2 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171493 4 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=94041.000000 s hg38.chr3_KI270935v1_alt 38378 59 + 197351 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTACTGGGGAAACC s rheMac3.chr6 1353 59 + 180491593 AATCCataaaaattttaaaattttcattataaaaGTAGTATATGCTTATTGGGGAAATC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180268569 59 - 181584905 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGTATATGCTTATTGGGGAAATC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173154871 59 - 174439528 aatccataaaaattttaaaattttcattataaaagtagTATATGCTTATTGGGGAAATC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89600939 59 - 91010382 AATCCATAAAAATTTTAAAATTTTCATTATAAAAGTAGCATATGCTTATTGGGGAAATC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147431 59 - 204313951 AATCCataaaaatttaaaaattttcattataaaaGTGGTATATGCTTATTGGGGAAACC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30171497 57 - 42124431 AATCCATAAACATT--ACAGCCTTCTGTATTAAAGTAGCACGTGCTTATCAGGGAAGTC i canFam3.chr34 I 4 I 9 e mm10.chr13 46084955 2036 - 120421639 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=121353.000000 s hg38.chr3_KI270935v1_alt 38437 96 + 197351 TTTTGAACAGCACAAATCTAAAATACAAATAGggccagacgcatagtggctcatgcctgtaatcccagcactttgggaggccgaagtgggtggatc s rheMac3.chr6 1412 96 + 180491593 TTTTGAACAGCACAAAGCTAAAATACAAATAGggtcaggcgtgcagtggctcatgcctgtaatcccagcactttggaaggctgaagtgggaggatc i rheMac3.chr6 C 0 M 6523 s macFas5.chr6 180268628 96 - 181584905 TTTTGAACAGCACAAAGCTAAAATACAAACAGggccagacgtgcagtggctcatgcctgtaatcccagcactttggaaggccgaagtgggaggatc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173154930 96 - 174439528 TTTTGAACAGCACAAAGCTAAAATACAAACAGGGCCaggcgtgcagtggctcatgcctgtaatcccagcactttgggaggccgaagtgggaggatc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89600998 96 - 91010382 TTTTGAACAGCACAAAGCTAAAATACAAATAGggccaggcacgcagtggctcatgcctgtaatcccagcactttgggaggccgaagtgggaggatc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147490 96 - 204313951 TTTTGAACAGCACAAAGCTAAAATACAAATAGGGTCAGGTgcatggtgcctcgtgcctgtaatcccagctctttggaaggccaaagtgggaagatc i calJac3.chr2 C 0 C 0 e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171554 9 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=173867.000000 s hg38.chr3_KI270935v1_alt 38533 234 + 197351 acctgaggtcaggagttcaagaccagcgtggccaacgtggcgaaacccagtctctactaaaaatacaaaaatcaattggatgtggtggtgcacacctgtattcccaggtacttgggaggctgaggcagaagaatcacttgaacttgggagccagaggttgccgtgagccgagattgtgccaccgtactccagcctgggcgacaagagttagaccctatctcaaaataaataaat s macFas5.chr6 180268724 225 - 181584905 acttgaggtcaggagttcgagaccagccgggccaacatggcgaaaccccatccctactaaaaatacaaaaattaactgggcatggtggtgcacacctgtaatcccagctacccgggaggctgaggcggaaaagtcacttgaacctgggagctggaggttgctgtgagccgagatcgtgccactgtactccagcctgggtgac-agagttagactctatctca--------gaat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173155026 225 - 174439528 acttgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattaaatggacgtggtggtgcacacctgtaatcccggctacccgggaggctgaggcggaagagtcacttgaacctgagagccagaggttgccgtgagccgagatcgtgccactgtgctccagcctgggcgac-agagttagaccctgtctca--------aaat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89601094 225 - 91010382 acctgaggtcaggagttcaagaccagcctggccaacatggcgaaacccaatctctactaaaaatacaaaaattaactgagcatggtggtgcacacctgtaatcccagctacccgagaggctgaggcggaaaagtcacttgaacctgggagccggaagttgctgtgagccgagatcgtgccactgtactccagcctgggcgac-agagttagactctatctca--------aaat i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147586 225 - 204313951 acttgaggtcaggagtttgagaccagcctggccaacttgacaaaaccccatttctacaaaaaagacaaaaattaactgggtgtggtggtaaatacctgtaattccagctactcaggaggctgaggcgggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcgtcactgcactccagcctgggcgac-agagcaagaccctatctca--------aaat i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46084955 2036 - 120421639 I e canFam3.chr34 30171554 9 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=7505.000000 s hg38.chr3_KI270935v1_alt 38767 7 + 197351 aaataaa s macFas5.chr6 180268949 7 - 181584905 aaataaa i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173155251 7 - 174439528 aaatcaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89601319 7 - 91010382 aaataaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147811 7 - 204313951 aaataaa i calJac3.chr2 C 0 C 0 s mm10.chr13 46086991 7 - 120421639 AAATACA i mm10.chr13 I 2036 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e canFam3.chr34 30171554 9 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=431385.000000 s hg38.chr3_KI270935v1_alt 38774 439 + 197351 taaaa-----TATAAATGGAAGTCTCTTCTCTGATCCCAGGCTTCTATCCTACCTGCGCAGGGTAGCAGCACCACTGGCGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTGTGCA-CACA--------GCACTGAGAAGATGGTG-CCCGGGGGCTGCCCTGTCCGTTCTGTGATCTCATTAGACAGGAGGTCCGGACGTGGGCCACTGTGTGCAGTCACTGCTCTCTGTTG----------TTTCCATAGGCTACGGGCGCACCTACTTGAGCTGCACGTCTGCCCACACCAGCACCAGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTTCAGTTCCACCCCACAGGTAGGGCAGGACGCCTTGCCCGGAAGGCGTTCGGCTC--GTGTGTCTTGTAAGC--------------GTGTGGTGCCTACTCATTGCTCT s macFas5.chr6 180268956 434 - 181584905 taaaa-----tacaaaTGGAAGTCCCTTCTCTGATCCCAGGCTTCTATCCTACATGCATAGGGTAGCAGCTCCACTGGTGTGGCCCCC--AGTGATGTGTGTGGGGTGTGCGTGAGTAGGGGGTTGTGT----------------GCACTGAGAAGACGGTG-CCCGGGGGCTGCTGTGTCCATTCTGTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTGTTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCAGGACACCTTGCCCGGCAGGTGTTCAGCTCATGTGTGTCTTATAAGC--------------GTGTGGTGCCTACTCATTGCTCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173155258 447 - 174439528 taaaa------acaaatggaagtcCCTTCTCTGATCCCAGGCTTCTGTCCTACCCGCACAGGGTGGCAGCCCCACTGCTGTGGCCCCC--AgtgatgtgtgtggggtgtgcGTGAGCAGGGGGTTGTGT----------------GCACTGAGAAGACGGTG-CCCGGGGGCTGCTGTGTCCATTCTGTGATCTCACCAGACAGGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTGTTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACGGGCGACGGCACGGCCATGATCACCAGGGCAGGCCTTCCTTGCCAGGACCTAGAGTTCGTTCAGTTCCACCCCACAGGTAGGGCAGGACGCCTTGCCTGGCAGGCGTTCAGCTCACATGTGCCGTGTAAGCTGTACTTGTAAGTTGTAAGCCAACTACTCATTGCTCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89601326 447 - 91010382 taaaa-----tacaaaTGGAAGTCCGTTCTCTGATCCCAGGCTTCTATCCTACCTGCATAGGGTAGCAGCTCCACTGGTATGGCCCCC--AGTGATGTGTGTGGGGTGTGTATGAGTAGAGGGTTGTGTGCA-CACAGACA----GCACTGAGAAGATGGTG-CCCGGGGGCTGCTGTGTCCATTCTGTGATCTCACCAAACAAGAGGTCCGGACGTGGGCCGCTGTGTGCAGTCACTGCTGTCTGTTG----------TTTCCAGAGGTTACGGGTGCACCTACT-----------TCTGCCCACACCAGCACCGGTGACAGCATGGCCATGATCACCAGGGCAGACCTTCCTTGCCAGGACCTAGAGTTTGTTCAGTTCCACCCCACAGGTGGGGCAGGACACCTTGCCTGGCAGGCGTTCAGCTCATGTGTGTCTTGTAAGCTCTACTTGTAAGTTGTA-GGCAACTACTCATCGCTCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 147818 428 - 204313951 taaaataaaaTACAGATGGAAGTCCCTTCTCTGA--CCTGGCTTCTATCGTA----CGCAGGGTAGCAGCACCACAGGCGTGGCCCCC--AGTGATGTGT---GGGGGTACCTGAGGAG-GGGTTGTGTGCA-CACAGACA----GCACTGAGAAGGTGGTGCCCCGGGTGTCTCCATGTCCATTC-GCAGTCTCATCAGACAGGAGGTCTGGATGTGGGCTGCTGTGTGCAGTCACTGCTCTC--TTG----------TTTCCAGAGGCTACGGGCGCACCTACTTCAGCTGCACGTCTGCCCACACCAGCACCGGTGATGGCACAGCCATGGTCACCAGGGCAGGCCTTCCTTGCCAGGACCTCGAGTTTGTCCAGTTCCACCCCACAGGTAGGGCACAGT----------GCAGGCATCGGGCTCATGTGTGTCTCATAAGC--------------GTGTGGTGCCTACTCATTGCTCT i calJac3.chr2 C 0 C 0 s mm10.chr13 46086998 416 - 120421639 AAAAA-----TACAA---TATTCCCCTTCTCTGTCTCCTAGCCTCCATCTTA--------TGTTAAGAACATCACAAGTATGGCCTCCCACGTATTGTGTGTCGTGTATATACATGCATGGGGCAGAGAACATTACAAGCAAGGGGTCATTAGAGGTTGGTGCCCCAGAGACTGC-----------------ACCATATAAGAGGAAGTTTGG-TGTGGACTGATGCTTATAGTCACTGTTTTC---TG----------CTTTCAGGGGCTACGGGCGAACCTACTTCAGCTGTACATCTGCCCATACCAGCACAGGGGACGGCACAGCCATGGTCACTAGGGCTGGTTTGCCTTGCCAGGACTTAGAATTTGTTCAGTTCCACCCCACAGGTAGGACAGAATACCT-----GTCTGGCTCTGGGCTCTTCTGTGTATTTCAAGC--------------ATGCAGTACCTATTCCTTGCTTT i mm10.chr13 C 0 I 246 s canFam3.chr34 30171563 384 - 42124431 TAAAG-----TACCAATGAAAGTGCCTTCTCTGTCCCTCAGGCTCCCACCCAGCTGCCCAGGGTA----------------------------------------GTGTATACAGACAG-----------CA-------------GCTGTCAGA-----GTG-CTTCTGGGCTGCTCTGTCCACTC--TGGTGCCATTAGAAAGGCAGACCTGA--TGGTTCACTGTGTGTCATGTTCTCTCCATGCTGGCATGTCTGTTTTCCAGAGGTTATGGGCGCACCTACTTCAGCTGCACATCTGCCCACACCAGCACCGGTGACGGCACCGCCATGGTCACCAGGGCAGGCCTTCCCTGCCAGGACTTGGAGTTCGTTCAGTTCCACCCCACAGGTAGGATGGGAT----TGCCTTCATGGGGTCAGGGATTTTCATGTCTTTTAAGc--------------cctccacagct-ctcaatgctcc i canFam3.chr34 I 9 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=100691.000000 s hg38.chr3_KI270935v1_alt 39213 134 + 197351 TCCATAGTTTTATGTAATAACATGGTTTTGAAgatcagcttccatagctctcaggtcctaacttcaatgtcatttccttaaggagacttttcccacactccccttcccctaaggcagtttgggccaccatctta s macFas5.chr6 180269390 134 - 181584905 TCCATGGTTTTATGTAATAACATGGTGTTGAAGATCAGcttcctcagctctcaggtcctcacttcaatgtcgtttccttaaggagacttttcctacactctccttcccctaaggcagtttgggccagcgtttta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173155705 134 - 174439528 TCCATGGTTTTATGTGGTAACGTGGTGTCGAAGATCAGCTTTCTCAGCTCTCAGGTCCTCACTTCAATGTCATTTCCTTAAGGAGATTTTTCCCACACTTTCCTTCCCCTAAGGCAGTTTGGGCCAGCATCTTA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89601773 134 - 91010382 TCCATAGGTTTATGTGGTAACGTGGTTTTGAAGATCAGctttctcagctctcaggtcctaacttcaatgtcgtttccttaaggagacttttcccacacttcccttcccctaaggcagtttgggccagcgtttta i chlSab2.chr4 C 0 C 0 s calJac3.chr2 148246 104 - 204313951 GCcatagttctat------------------------gctttctcggctctcaggtcctgacttaaatgtcatttccttaaggagactttgcccacacct------ccctaaggtagtttgggccaccgtctta i calJac3.chr2 C 0 C 0 s canFam3.chr34 30171947 100 - 42124431 tcggcaattccatacactgacat-----------------------gttctcagagcccacct----tgtcatttgctcaaggagatctttccctgtctc------ccccaaagcagcttagggca-catctta i canFam3.chr34 C 0 I 21 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087414 246 - 120421639 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=275548.000000 s hg38.chr3_KI270935v1_alt 39347 368 + 197351 tgcatttctcaagagccctaaaccctgccttggtgatacttatgccagcagtaaagcagggattgaggccgggcatggtggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaagaccagcctgcacaacatggtgaaacctcatctctactaaacataaaaaaatcagctgggcatggtggcatgcacctgtgatcccagctacttgggaggctgaggcgggaggaatgct----tgaacctgggaggcagaggttgcagtgagccgagatcgcaccactgcgctccagcctgggcaacagagtaagacttcgtctcaaaaaaaaaaaaaaaaaaag s macFas5.chr6 180269524 361 - 181584905 tgcatttctgaagagccctaaaccctgccttgatcatacttgtgccagcagtaaagcagggattgaggccaggcgcggtggctcatgcctggaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccgaccaacatggtgaaacctcatgtctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctataatcccagctacttgggaggctgaggtgggaggaatgtt----tcaacctgggaggcagaggttgcagtgagcccaggtcgcacccctgcactccagcctgggcaacagagtaagactccgtctc-------aaaaaaaaaaaag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173155839 363 - 174439528 TGCATTTCTGAAGAGCCCTAAACCCTACGTTGGTGATACTTGTGCCAGCAGTAAAGCAGggattgaggccaggcgcggtggctcacacctgtaatcccagtactttgggaggccggggcggccggatcacctgaggtcagcagtttgagaccaacccaaccaacaaggtaaaacttcatctctactaaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaatcccagctacttgggaggccaaggcaagaggaatact----tgaatctgggaggcagaggttgcagtgagccgagatcacacccctgcactccagcctgggcaacacagtaagactccgtctc-----aaaaaaaaaaaaaag i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89601907 361 - 91010382 tgcatttctgaagagccctaaaccctgccttggtgatacttgtgccagcagtaaagcagggattgaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcccagccaacatggtgaaacctcatctctactgaaaatacaaaaatcagcatggcgtggtggcatgtacctgtaatcccagctacttgggaggccaaggcaagaggagtact----tgaatctgggaggcagaggttgcagtgagccgagatcgcacccctacactccagcctgggcaacagagtaagactctgtctc-------aaaaaaaaaaaag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 148350 362 - 204313951 cgcattcctcaagaaccctaaaccctgccttggtgatacttatcccagcagtaaagcggggattgaggccgggcacagtgactcacacctgtcatctcagcactttgggaggtcgaggcaggtggatcacctgaggtcaggggttcgagaccagcctggccaacatggtgaaacctcatctctactaaaaatacaaaaattaggtgggcatggtggcaggtgcctgtaatcccagctactcaggagactgaggcaggaggaacgcttgactgaacct--gaggcagaggttgcagtgagctcagatcgtgccacggccctccagcctgggcaacagagtaagactccatctc-------aagtaaaaaaaa- i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087414 246 - 120421639 I e canFam3.chr34 30172047 21 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=532542.000000 s hg38.chr3_KI270935v1_alt 39715 653 + 197351 taaagcaggaattgttcagtgtccct-ctttgcagtgaggttgtcagcaactc--g----ggcaggcaggtcttctcattaactggggtgctccacgcccagcacatggtagggtctccatcggggtttactgagtgaGCATTCTGAGAGCTG-GGTGAATGCCGTGGAACCAAGAAGCAGCACAGGCAGATTTCAGCTTTGTA-GGACAACACAGAGCTTCCGTGACAATGGGATGTAAAGTTAAGACACAGCCATGAGAGA----------ACCCCATGTGACGTT-GGGCGCT-GGGCTCAGCCCACGTGACCACTGAGGGAGCTT-GTCGTGGGGAAGATGAGCTCGTCTTGGGGACGTCTGACGGTTGAGGTTACGAATGTGCAATTTGGAGACATTAACTCAGAAATGACAGTTGAAGTCTTGAGTTTGGAGGAGGTTCTTCAA-AATGAGTC--AGAGACAGACACACACACGTCTGCCTCTTGTTTGAGGTGACTCGTCCTG----GACTTTTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCCAAAGAACCAGACCTGTGTCTTCTCTTT-CTCTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATGAAAATAAGAAATGGATTTGTTGTAGG----------tttttttttta---atttgttta s macFas5.chr6 180269885 651 - 181584905 taaagcagggattgttcagtgtccct-cttcgcaacgaggtcgtcagctcctc--g----ggcaggcaggtcttctcattagctggggtggcccatgcccagcacgtggcagggtctccatcagggtttgctgagtgaGCGTTCTGAGAGCTG-GGAGAATGCCGTGGAACCCAGAAGCAGCACGGGCAGATTTCGGCTTTGTA-GGAGAACACGGAGCTTCCGCGATAATGGGGTGTAAAGTTAGGGCACGGCCGTGACAGA----------ACCCCGTGTGACGTTCGGACGTTGGGGCTCCGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGGGACGTCTGACGGTTGAGCTTACGAATGTGCAGTTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTTGGGGGAGGTTCTTCAG-AATGAGTC----AGAGAGAGACACACACATCTGCCTCTTGTT-----TGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCTTCTCTTT-CTCTGTCAGTGTCAGCTTTCTGGTCCCTGGAAGGGATGAAAATAAGAAATGAATTTGTTGTAGG-----tt--ttttttttttta---atttgttta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173156202 663 - 174439528 ttaagcaggGATTGTTCAGTGTCCCT-CTTCACAACGAGGTCGTCAGCTCCTC--G----GGCAGGCACATCTTCTCATTAGCTGGGGTGGCCCATGCCCAGCACGTGGTAGGGTCTCCATCAGGGTTTACTGAATGAGCATTCTGAGAGCTG-GGAGAATGCCATGGAACCCAGAAGCAGCACAGGCAGATTTCGGCTTTGTA-GGAGAACATGGAGCTTCTGCGATAATGGGATGTAAAGTTAGGGCACAGCCGTGACAGA----------ACCCCGTGTGACGTTCGGACATTGGGGCTCAGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCAGGGACGTCTGACGGTTGAGCTTACGAATGTGCAATTTGGAGACATTAACACAGAAATGACATTTGAAGTCTTGAGTTTGGGGGAGGTTCTTCAG-Aatgagtc--agagagagagacacacacatcTGCCTCTTGTTTGAGGTGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-GATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTgtgccttctcttt-ctctgtcagtgTCAGCTTTCTGATCCCTGGAagggataaaaataagaaatgaatttgttgtaggttttttt--ttttttttttta---atttgttta i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89602268 667 - 91010382 ttaagcagggattgttcagtgtccct-cttcacaacgaggttgtcagctcctc--g----ggcaggcaggtcttctcattcgctggggtggcccacgcccagcgcgtggcagggtctccatcagggtttactgaGGGAGCATTCTGAGAGCCG-GGAGAATGCCGTGGAACCCAGAAGCAGCACAGGCAGATTTCGGCTTTGTA-GGAGAACATGGAGCTTCCGCGATAATGGGGTGTAAAGTTAGGGCACAGCCGTGACAGA----------ACCTCGTGTGACGTTCGGACATTGGGGCTCAGCCCACACGACCACTGAGGGAGCTT-GTTGTGGGGAAGATGCGCTCATCTCGGAGACGTCTGACGGTTGAGCTTACAAATGTGCAATTTGGAGACATTAACACAGAAATGACAGTTGAAGTCTTGAGTTGGGGGGAGGTTCTTCAG-AATGAGTCAGAGAGAGAGAGACACACACATCTACCTCTTGTTTGAGGTGACTCGTCCTG----GACTTCTCT--GGGTTGCTTTTCTGACCTGTGGAC-AATGGAGACCCC----TGAAGTGG------------TGCTAAAGAACCAGACCTGTGCCTTCTCTTT-CTCTGTCAGTGTCAGCTTTCTGATCCCTGGAAGGGATGAAAATAAGAAATGAATTTGTTGTAGGttttttttgttttttttttta---atttgttta i chlSab2.chr4 C 0 C 0 s calJac3.chr2 148712 650 - 204313951 --aggcagggattgttcagtgtccctaattcgcaacaaggtcatgtgcttcttggg----ggcgggcaggtcttctcattgaccggggttctccaagcccagcacatggcagggcctccatcagggtttcctgagtgaGCACCCTGAGAGCTG-GGAGGGTGCCGTGGACCCAAGAAGCAGCACAGGCGGATTTCAGCTTCGTA-GGAGAACATGGAGCTTCTGTGATCGTGGGGTGCAAAGTTAGGACACAGCTGTGACAGA----------ACC-CATGTGACATTTAGGCATT--GGCTCAGCCCACGTGACCACTGAAGGAGCTTCGTCCTGGGGGAGATGAACTCACCTTGGGGACGTCTGATGGTTGAGGTTACGAATGTGCAGTTTGGAGACATTAACACAGAAATGACAGTTGCAGTCTTGAGTTTGGGGGACGCTTTTCAGAAATGAGTC--AGAGAGAG------ACACATCTGCCTCTTGTTTGATGTGACTCGTCGTGATGTGACTTTCCT--GGATTGCTTTTCTAACTTGTGGAC-TACAGAGACCCC----TGTAGTGG------------TGCTAAGGAACCAGACCTGTGTCTTCTTTTT-CTCTCTCAGTGGCATCTTTCTGATCCCTGGCAGGGATGAAAATAAAAAATGTATTTGTCGTGGG-------------GTTTTGTA---Atttgttta i calJac3.chr2 C 0 C 0 s canFam3.chr34 30172068 610 - 42124431 tagagccatgactgttcagtattcct-ctccctgactcagtggtctgctccca--gaggtgggggccagtactgct---------gtgttcacagtgcctgacgcacagtaggacct-gggcagtatttac-aagtgaatgtCCTCACAGCTGTGGGGGATGCTGTTGA--CGAGATGTGGCATGGGCACAGT----CGCTGTAGGGAGGACATCAAGCTGTCCCAGTAGTAGAGTATAAAGCTGAGATG-AGCTGTGGCAGACATGACCCCCCCCCCCCAAGATGTT-GGTAACT--------GCCCA---------------------GTCATGGACAGATTGAGCTCCTCTT-GGGTCCTCagacagttgagtgtgcaaatgtggggttcagaaggg--aggtctgggctgagggtgcaggtct--ggTTT-------GTTATCCAGAAGTGAATC--AGAGAAGGAGA----------------------GATGAGTCTCATTCTG----GACTTTCTTTCTGATTGCTTTTCTGATCTATCAACTGAGGGACACCACACTTTATGGCAGTACCACCCACCTTGCTACAGAACCAGATCTGTTTTTTCTCTTTGCTCTGTCAGTATATTTTTTCTGATCCCTGACA--GATGAAAAATAAAAATG---TTTAAGTAGT---------TTTGCTTCTTTAAGGatttattta i canFam3.chr34 I 21 I 531 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087414 246 - 120421639 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=68045.000000 s hg38.chr3_KI270935v1_alt 40368 86 + 197351 gagatggggtcttgctctgttgcccaggc----tggagtgcagtggagcaatcttgactcactgcagcctttgtctcccaggctcaaacg s macFas5.chr6 180270536 86 - 181584905 gagacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcctttgtctcccaggctcaaagg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173156865 86 - 174439528 gagacggggtcttgctctgttgcccaggc----tggagtgcagtggagcagtcttggctcactgcagcctttgtctcccaggcttaaagg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89602935 86 - 91010382 gagacggggtcttgctctattgcccaggc----tggggtgcagtggagcagtcttggctcactgcagcctttgtctcccaggctcaaagg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 149362 88 - 204313951 gagatagggtcttgctctgtt--ccaggctggatggagtgcagtggagcagtcttgtctcaccgcagccagtgcctcccggactcaaaca i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087414 246 - 120421639 I e canFam3.chr34 30172678 531 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 4856 20 + 103936 I a score=243770.000000 s hg38.chr3_KI270935v1_alt 40454 209 + 197351 atccttgcacctcagcctcccaaatagctgggactacaggcatgtgttaccatgcccagctaatttttgagggtttttttgtttttggtagagacagggtgtcaccattttaagcccaggctggtctcaaacgccagggcttaggcgatcctcctgcctcggcccctcagggtgctggcattatagccatgagccactgcacccggccT s panTro4.chr3_GL389630_random 4876 209 + 103936 atccttccacctcagcctcccaaatagctgggactacaggcatgtgttaccatgcccagctaatttttgagggtttttttgtttttggtagagacagggtgtcaccattttaagcccaggctggtctcaaacgccagggcttaggcgatcctcctgccttggcccgtcaaggtgctggcattatagccatgagccactgcacccggccT i panTro4.chr3_GL389630_random I 20 C 0 s macFas5.chr6 180270622 207 - 181584905 atccttccacctcagcctcccaaacggctgggactacaggcatgcgttaccacgcccggctaatttttgagggttgttttgtttttggtagagatggggtgtcaccgtttt--gcccaggctggtctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacctggtcT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173156951 207 - 174439528 atccttccacctcagcgtcccaaacggctgggactacaggcatgcgttaccatgcccggctaatttttgagggttgttttgtttttggtagagacggggtgtcaccgtttt--gcccaggctggtctcaaactccagggcttaggcgatcctcctgcctcggcccctcaaagtgctgggattatagccatgagccactgcaccgggtct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603021 207 - 91010382 atccttccacctcagcgtcccaaacggctgggactacaggcatgcgttaccatgcccagctaatttttgagggttgttttgtttttggtagagacggggtgtcaccgtttt--gcccaggctggtctcaaactccagggcttaggcgatcctcctgcctcggcccctcagagtgctgggattatagccatgagccactgcacccggccT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 149450 207 - 204313951 atccttccacctcagcctcccaaacagctgagactacaggcatacattaccatgcccagctttatttttttattttttatttttttggcagagacatggtttcaccatttt--gcccaggctgatctcaaactcctgagcttaaggaatccacctgccccagcctcccagagtgctgggattccaggcatgagccaccgcgcctagccT i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087414 246 - 120421639 I e canFam3.chr34 30172678 531 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=413165.000000 s hg38.chr3_KI270935v1_alt 40663 327 + 197351 GTTGTA-TTTTTTATTACTGTTTTTAATCAGCAAAATGTCAGTGAGCCCCTGAATTCCCTC-TGTAATTTGCTTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACAG----AAAAAAGAGCATGGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAATCACATTCTTGTCTTGAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAAATACATTTAGTTTA------------GGGTTTTTGATCTCCTTTGTTAAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG s panTro4.chr3_GL389630_random 5085 327 + 103936 GTTGTA-TTTTTTATTACTGTTTTTAATCAGTAAAATGTCACTGAGCCCCTGACTTCCCTC-TGTAATTTGCTTAGAGCTTCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAA-CCACCG----AAAAAAGAGCATAGAAACTTAGAAAATCAAAAGGCAGGTGAGATGCAAGAATCACATTCTTGTTTTGAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAAATACATTTAGTTTA------------GGGTTTTTGATCTCCTTTGTTAAAATTCGAGAGCTTGGCACGCCCTGTTTCTCATCGCACTGAGGAGTCACAGAG i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 180270829 330 - 181584905 GTTGTATTTTTTTATTACTTTTTTTAATCAATAGAATGTCACTGAGTCCCTGAATTCCCTC-TGTAATTTGCTTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG---AAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGCAAGATGCAAGAATCACATTCTCGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAAATACGTTTACTTTC------------GGGTTTTTGATCTCCTTTGTTAAAATTAGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173157158 329 - 174439528 gttgtatttttttgttactttttttaatcaataaaatgtCACCGAGCCCCTGAATTCTCTC-TGTAATTTGCTTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGGGAAGTAATCCGCAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGTGAGATGCAAGAATCACATTCTTGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAAGTACGTTTAGTTTC------------GGGTTTTTGATCTCCTTGGTTAAAATTCGAGAGCTAGGCATGCCCTGTTTCTCATCGCCTTGAGGAGTCACAGAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603228 329 - 91010382 GTTGTATTTTTTTATTACTTTTTTTAATCAATAAAATGTCACTGAGCCCCTGAATTCCCTC-TGTAATTTGCTTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGTAATCCACAG----AAAAAAGAGCATTGAAACTTAGAAAATCAAAAGACAGGTGAGATGCAAGAATCACATTCTCGTTTTAAAAGCAAGATTGCCCTTTTTGTATACTAATAAAAATTGTAGCTTTTGAAATACGTTTAGTTTC------------GGGTTTTTGATCTCCTTTGTTAAAATTAGAGAGCTAGGCATACCCTGTTTCTCATCGCATTGAGGAGTCACAGAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 149657 341 - 204313951 GTG----TTTATTATTACTGTTTTTAACCGATCAAATGTCACTGACCTCCTGAATTTCCTC-TGTAATTTGCTTAGAGCTCCACTTCTCATGCTTTGTCTTCAATATGTGAGAAGCTATCCACACAAAAAAAAAAGAGCATTGAAACTTAGAAAATCAAAAGGCAGGTGAGATACGAGAATCACATTCTTGTTTTAAAAGCAAGATTGCCCTTTTTGTATTCTAATACAAATTGTAGCTTTTGAAATACATTCAGTTTAGGGTTTTTTTGTGGGTTTTTGATCTCCTTTGTTAAAATCTGAGCGCTCAGCATGCCCAGGTTTTCATGGCGTCGAGGAGTCACAGAG i calJac3.chr2 C 0 C 0 s mm10.chr13 46087660 282 - 120421639 GTTAGT-TTTCTTACTTCAGTTTCT-----GTCTAGTGTCTCTGAGCCTCTGGAGCCAGTCACATACTGTGTTTAGCACTTCATTTCTTATACTTTCTTTACAATATATAAAAATAAA-CTACCC----GACAGATGTTACTGAAGCTATGAAAAGTGAAAAGCA--------------------------CTTTTAGAGCATG--TAACCTTTTGGCATATGAAAGGAAAAC-TGGCTTTAAAATAACCCTTACTTAG----------------------TCTCTTCCCTTAAAACTCAATA-CTTGGCATCCCTTGTCTTTCCTTACACTGAAG-GACACAAAA i mm10.chr13 I 246 I 38 e rheMac3.chr6 1508 6523 + 180491593 M e canFam3.chr34 30172678 531 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=109372.000000 s hg38.chr3_KI270935v1_alt 40990 85 + 197351 CCGCTgtttggggcacagaccgccggactgcccaggtttgggtttgagctctgtcctcagctgcatgactggatgttaccaagcg s panTro4.chr3_GL389630_random 5412 85 + 103936 CCGCTATTTGgggcacagaccgccggactgcccaggtttgggtttgagctctgtcctcagctgcatgactggatgttaccaagcg i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 180271159 85 - 181584905 CCGCTgtttggagcacagaccgccagactgcccaggtttgggtttgagctgtgtcctcaactgcatgactggatgttaccaagcg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173157487 85 - 174439528 CCGCTGTTCGGAGCACAGACCGCCGGACTGCCCGGGTTTGGGTTTGAGCTGTGTCCTCAACTGCATGACTGGATGTTACCAAGCG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603557 85 - 91010382 CCGCTgtttggagcacagaccgccggactgcccaggtttgggtttgagctgtgtcctcaactgcatgactggatgttaccaagcg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 149998 84 - 204313951 CCGCTgtttggagcacacaccgccgggctgcccaggttggggtttgaactctgtcctcagctgcatgactggatgttacc-agca i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46087942 38 - 120421639 I e canFam3.chr34 30172678 531 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=45484.000000 s hg38.chr3_KI270935v1_alt 41075 45 + 197351 ttaatttgcttgtcactgagaaagggggtcatactacccagagtt s panTro4.chr3_GL389630_random 5497 45 + 103936 ttaatttgcttgtcactgagaaagggggtcgtactacccagagtt i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 180271244 44 - 181584905 gtaatttgc-tgtcactgagaaagcgggtagtactacccggagtt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173157572 44 - 174439528 GTAATTTGC-TGTCACTGAGAAAGCGGGTAGTACTACCCGGAGTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603642 44 - 91010382 gtaatttgc-tgtcaatgagaaagtgggtagtactacccggagtt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 150082 45 - 204313951 ttaatgtgcttgtcagtgagaatgggggtcctactacctggagtt i calJac3.chr2 C 0 C 0 s mm10.chr13 46087980 40 - 120421639 TTTTTTTTTTTGCCTCTGAGGATAGACTTCTTAGTACCCA----- i mm10.chr13 I 38 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e canFam3.chr34 30172678 531 - 42124431 I e ponAbe2.chr3 199687559 12 + 202140232 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=178606.000000 s hg38.chr3_KI270935v1_alt 41120 118 + 197351 gttgtaagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtgtaaagatgaactaaaataatcattattactGTTCTTGCCACTGTTTGGGTAAC s panTro4.chr3_GL389630_random 5542 118 + 103936 gttgtaagacttaaatgagtttaatatgtggaaagcagctagaactgcccatagcaagtgcagtgtaaagatgaactaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199687571 118 + 202140232 gttgtaagacttaaatgagtttaatatgtggaaagtagctagaactgcccatagcaagtgcagtgtaaatattaactaAAAGAATCATTATTACCGTCCTTGCCACTGTTTGGGTAAC i ponAbe2.chr3 I 12 C 0 s macFas5.chr6 180271288 114 - 181584905 gttgtaagacttaaatgagtt----atgtggaaagcagctggaactgcccctagcaagtgcagtgtgaatattaagtaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173157616 116 - 174439528 GTTGTAAGACttaaatgagtt-aacatgtgGAAAGCAGCTAGAACTGCCCC-AGCAAGTGCAGTGTGAATATTAACTAAAATAATCATTATTACTGTCCTTGCCACTGTTTGGGTAAT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603686 116 - 91010382 gttgtaagacttaaatgagtt-aacatgtggaaagcagctagaactgcccc-agcaagtgcagtgtgaatattaactaaaataatcattattactGTCCTTGCCACTGTTTGGGTAAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 150127 107 - 204313951 ---gtaaagcttaaatgagtt-aataggcggaaagcagctagaactgtccatggcaaatGCAGTGT----ATTAACTAGAATA---ATTGTTACTGACCTTGCCACTGTTTGGGTAAT i calJac3.chr2 C 0 C 0 s mm10.chr13 46088020 80 - 120421639 -TCATAGACATGAAATGAGTA-AATGTTTAG------------ACT------------TGAAACATAAATACTAACCATTAAAATAATTTTT------------GCTGTTTCAGGACT i mm10.chr13 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e canFam3.chr34 30172678 531 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1296357.000000 s hg38.chr3_KI270935v1_alt 41238 646 + 197351 TTAGATATGAATTCTCCAAGCTAG-TAT-------TCTTAAC-----TAGTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAAATTTGAGGCATCCAACGTACACCGGGCTGTAATCAGAGTATTGGCCAGAGGTCTGTG------------GGCCGGCCTTTCTCCTCTCTGGGGACGCCACTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTG---TTCTTTCTGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTTGTCTCTCCCCCAAAAAATATCTTGTAAAAAAAAGTAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-------TG-GTTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGTGG--------------------------TTTACCACCAG----------CACTGTCTGA---------GCGGGCACACGGGCC--------------------------------------------------------------------GGGGTTGCTTCTGTGAGTTTCAGCAC---CGCTCGCCCTCACCT---- s panTro4.chr3_GL389630_random 5660 646 + 103936 TTAGATATGAATTCTCCAAGCTCG-TAT-------TCTTAAC-----TAGTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAAATTTGAGGCATCCAGCGTACACCAGGCTGTAATCAGAGTATTGGCCAGAGGTCTGTG------------GGCCGGCCTTTCTCCTCTCTGGGGACGCCACTCTGCCCCAGCCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCATAACTG---TTCTTTCTGTTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTAGTCTCTCCCCCAAAAAATATCTTGTAAAAAAAAATAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATG--TG-------TG-GTTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATTACGGAAGGATGTTGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGTGAAAGGTTTATGGAGCGATACGCCCCCATCGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTGGATGACTCTGGAGATCCGCGAAGGAAGGTGCGTGTGG--------------------------TTTACCACCAG----------CATTGTCTGA---------GCGGGCACACGGGCC--------------------------------------------------------------------GGGGTTGCTTCTGTGAGTTTCAGCTC---CACTCGCCCTCACCT---- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199687689 644 + 202140232 TTAGATATGAATTCTCTAAGCTAG-TAT-------TCTTAAC-----TAGTCACTCCAGTATCATAGTGCAGAAGAATGTTCAAAAATTAAAACAAAATTTGAGGCATCCAACGTACACCAGGCTGTAATCAGAGTATTGGCCAGAGGTCTGTG------------GGCCGGCCTTTCTGCCCTCTGGGGACGCCACTCTGCCCCAGCCTGTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATGTTAACTG---TTCTTTCTATTCAGTTTT----GCATATACTGCCTTCTGCATATCTTTTTCATCTCTCCCCCAAAAAATATCTTG-AAAAAAAAATAATGCATTTGAAATAGAGAGCTAGCAATTGTTAGGTTATAAACG--TG-------TGTGGTTTTTGCAGGCACATATGGTGCTGGTTGTCTCATTACGGAAGGATGTAGTGGAGAGGGAGGCATTTTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATATGCCCCCGTCGCGAAGGACCTGGCATCTCGAGATGTGGTGTGTCCGTCGATGA--CTGGAGATCTGCAAAGGAAGGTGCATGTGA--------------------------TTTGCTACCAG----------CATTGTCTGA---------GCGGGCACTCGGGCC--------------------------------------------------------------------GGGGTTGCTTCTGTGAGTTTCAGCAC---CGCTAACCCTCAGCT---- i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180271402 645 - 181584905 TTAGATATGAATTCTCCAAGCTCG-TAT-------TCTTAAC-----TAGTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAAATTTGAGGCATGCAGCGTACACTGGGCTGTAATCAGAGTATCGGCCAGAGGTCTGTG------------GGCTGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTCGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTATCTTAACTG---TTCTTTCTATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAA-ATCTTG--AAAAAAAATAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-------TG-GTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATTACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGTGA--------------------------TTTACCACCAG----------CATTGTCTGA---------GTGGGCACACGGGCC--------------------------------------------------------------------GGGGTTGCTTCTGTGAGTTCCAGCAC---CGCTCGCCCTCACCT---- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173157732 641 - 174439528 TTAGATATGAATTCTCCAAGCTCG-TAT-------TCTTAAC-----TAGTCACCATAGTGTCATAGTGCAAAAGAatgttcaaaaattaaaacaaaatttgaggCATCCAGCGTACACTGGGCTGTAATCAGAGTATCGGCCAGAGGTCTGTG----------------GGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTGCAGCTGTCAGCCTTGTCAGTGCTTTTTGTTATCCAGACTTTCTACTGTGTCTTAACTG---TTCTTTCTATTCAGTTTT----GCATATAATGCCTTCTGCatatctttttcctctctcccccaaaaaatatcttg---aaaaaaataatgcatttgaaaTAGAGACCTAGCAATTGTTAGGTTAtaaatgtttg-------tg-gttttttgCAGGCATATATGGTGCCGGTTGTCTCATCACGGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCCGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGTGAAGGAAGGTCCGTGTGA--------------------------TTTACCACCAG----------CATTGTCTGA---------GTGGGCACACGGGCC--------------------------------------------------------------------GGGGTTGCTTCTGTGAGTTCCAGCAC---CGCTCGCCCTCACCT---- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89603802 645 - 91010382 TTAGATATGAATTCTCCAAGCTCG-TAT-------TCTTAAC-----TAGTTACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACAAAATTTGAGGCATCCAGCGTACACTGGGCTGTAATCAGAGTATCGGCCAGAGGTCTGTG------------GGCTGGCCTTTCTCCTCGCTGGGGACACTGCTCTGCCCCAACCTCTGCTTCAGCTGTCAGCCTCATCAGTGCTTTTTGTTATCCAGACTTTCTACTGTGTCTTAACTA---TTCTTTCTATTCAGTTTT----GCATATAATGCCTTCTGCATATCTTTTTCCTCTCTCCCCCAAAAAATATCTTG---AAAAAAATAATGCATTTGAAATAGAGACCTAGCAATTGTTAGGTTATAAATGTTTG-------TG-GTTTTTTGCAGGCATATATGGTGCCGGTTGTCTCATTACGGAAAGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTTATGGAGCGATACGCCCCTGTGGCGAAGGACCTGGCGTCTAGAGATGTGGTGTCTCGGTCGATGACTCTGGAGATCCGCGAAGGAAGGTCCGTGTGA--------------------------TTTACCACCAG----------CGTTGTCTGA---------GTGGGCACACGGGCC--------------------------------------------------------------------GGGGTTGCATCTGTGAGTTCCAGCAC---TGCTCACCCTCACCT---- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 150234 703 - 204313951 TTAGATGTGAATTCTCCAGGCTGGTTAT-------TCTTAACTAAAGTAGTCACCACAGTATCATAGTGCAAAAGAATGTTCAAAAATTAAAACCAAATTGGAGGCATTTAAC-CACAGCAGGCTGCAATCCAAGTAT-GGCCACAGCTCTGTG------------GGCT--CCGTTCTGCTCGCTGGGGACTCCGCTCTGCCCAGACC--TGCTGCA-CCGTCAGCCCTGTCAGTGCTCCTTGGTATCCAGACTTCCTACTGTATCTTAACTTTTCTTCTTTCTATTCAGTTTT----GCATATGATGCCTTCTGCCTATC--CTTCCTCTCTACCGT-AAAAATACCTTG------AAAAAAATGTGTTTGAAATAGAGACCTAGCAATTGTTGAGTTATAAATGTTTG-------T--GTTTTTTTCAGGCATCTATGGTGCTGGGTGTCTCATCACAGAAGGATGTCGTGGAGAGGGAGGCATTCTCATTAACAGTCAGGGCGAAAGGTTTATGGAGCGATACGCCCCCGTTGCGAAGGACCTGGCATCCAGAGATGTGGTGTCTCGGTCCATGACTCTGGAGATCCGCGAAGGAAGGTCTGTATG---------------------------TTTATCACCAG----------AGTCGTCTGA---------GCAGGCACACGGGCACGTGCACACTCTTCCTTCCCTTCAC-TTCCTCTTTGGT-GACTTCATGTTTGTTTTAGCATCTGGGAGGGCGTTGCTTC--TGAGTTTCAGCAC---TGCCCGCCCTCACCT---- i calJac3.chr2 C 0 I 154 s mm10.chr13 46088100 631 - 120421639 TAAGATAGAAATTCTCTAAGTTGT-TTTATCCCTGCCTAAAC-----TTGTTATCGCATT-TCTTGGTATAAAGATATATTTAAAAAC---ATTAAATCTATAAGCATGGA--------TGGTGTTTAGTCAGAGTATGTGTTAGA----------------------------------CCCTGTGAGTGAGCTGCTGTTCCTGAAGCTCTTGTG---CTTTCTGGTTTGTTGCTGCTGCTTGTCACACACA-TTCCTTCTCCTACTTGACTT---TTCTTCTTA-----TTTT----GAGTTTAATGTTCTTTGTGTCTA------------CTCCCAAAAAGTGGCTTCTAAAGAAGGATTAACCATTTGAAGTAGTTTCCTAGTGCTCGTTCATTTATAAACATTTAATC--ATTG-GATTTTTACAGGTATATACGGTGCTGGCTGCCTCATCACAGAAGGGTGTCGTGGAGAGGGGGGGATTCTCATCAACAGTCAAGGTGAAAGGTTCATGGAGAGATACGCACCTGTTGCCAAGGACCTGGCATCAAGAGATGTTGTGTCTCGATCCATGACTCTTGAGATCCGTGAAGGAAGGTC--TGTAA--------------------------TTCTCCTTCAG----------GGATGCAGGAGTGTAGGGGGTGGAAAAACGTGTC----------------------CACTTTTCTCTTTGGTAGGCAT------------------------TAGGTCACATC--TACTTTTGCACAC---AGGT-GCCCTGCCCT---- i mm10.chr13 C 0 C 0 s canFam3.chr34 30173209 686 - 42124431 TTAGATACAAACTTTCCAAACTGT-TTT-------TTTCTAC-----C--TCATCACAATTTCTTGGTATAAAACAACATTCTAAAATTAAAAGGAAGCCTGAGATATTTAACACGTACTTGGTTGTGTTGAAAGTTC---ACACATGGTTGTCATCGAAATATTCAGCCGAGCTATGTCATCACCACGGA-GCTGAGCTTTCCC--CTCCTGCTG----------CTTTGTCAGTACTTTTTGTTATCAAAACTTC--ACTCTTCCTTAACCT---TTCCTTTGTCTAACTCTTTTAGGAGCACAATGCCCTTTCCATATCTTTTTCCTTTCCCC----AAAAATGTCTTG---AAAAAAATT-TGCATTTGAAATACAGACCTAGCAATTGTTAGGTTATAAACATCTAATTAAATGG-GTTCTTTGCAGGTATATATGGTGCTGGTTGTCTCATTACGGAAGGATGCCGTGGAGAGGGAGGCATTCTCATTAACAGTCAAGGCGAAAGGTTCATGGAGCGATATGCCCCAGTCGCAAAGGACCTGGCATCCAGAGACGTTGTATCTCGGTCCATGACTCTGGAAATCCGTGAAGGCAGGTGTGTCAGAGCGCACATGCATGCATGCACCCCTCCTTTCTCTTTGGTGGCTGTTGTTGGTGTCTGT---------ATTTTAACATGGGCT--------------------------------------------------------------------GATGTGGCTTTTGTGTGTTTCAGCACCCACGCATCATCCCACCCAGCT i canFam3.chr34 I 531 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=536265.000000 s hg38.chr3_KI270935v1_alt 41884 339 + 197351 TCGTGTGCAGGCACATGTGCACAGCCACCTCTCTCAGCTGCCGGCAGGC-GTCTGTTAGTCTGCGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGTTTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGACGGAGTATGGGAGAGAGAGACACGCA--CCCAACCTGAAGTCGGCGTGTGAGCCTTGGGTGTGGTGTCTGATACCCACAGATGTTTTTCGGCAGC----TTTCAAAGTGTGTGGGTCATTTGCCTTTCAGA---AGAACAGTTTGCAGCTCTTTCATTGCCTGACCCTGTTCT------TTAATGTGA---TAACACTT s panTro4.chr3_GL389630_random 6306 339 + 103936 TCGTGTGCAGGCACATGTGCACAGCCACCTCTCTCAGCTGCCGGCAGGC-GTCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTTTAGCCAGTTTCTT-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGATGGAGTATGGGAGAGAGAGACACACA--CCCAACCTGAAGTCGGTGTGTGAGCCTTAGGTGTTGTGTCTGATACCCACAGATGTTTTTCGACAGC----TTTCAAAGTGTGTGGGTTATTTGCCTTTCAGA---AAAACAATTTGCAGCTCTTTCATTGCCTGACCCTATTCT------TTAATGTAA---CGACACTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199688333 339 + 202140232 TCGGGTGGAGGCACATGTGCACAGCCACCTCTCTCAGCTGTGGGCAGGC-ATCTGTTAGTCTGTGATATTTTCCTAAAGACCTACATTTTGAAAATTGTAGCCAGTTTCTG-----TCTCAAATCTGTGGAACAGAGTTT-CTCTTAG--------AGTGTGTGAATATGTGACGGAGTATGAGAGAGAGAGACACACA--CCCAACCTGATGTCGGTGTGTGAGCCTTGGGTGTTGTGTCTGATACCCACAGATGTTTTTCGGCAGC----TTTCAAAGCGTGTGGGTTATTTGGCTTTCAGT---AAGACAATTTGCAGCTCTTTCATTGCCTGACCCTGTTCT------TTAATGTAA---TGACACTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180272047 328 - 181584905 TCGTGTGCAGGCACACGTGCACAGCCACCTCTCTCAGCTGCTGACAGGC-GTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTAAAAATTTTAGCCAGTTTCTT-----TCTCAGATCTGTGGAACAGAATTT-CTCTTAG--------TGTGGGTGAGTATGTGACAGAGTACGGGAATGAGAGACGCACA--CGCAACCTGAAGTCGGCACGTGAGCCTTGGGTGTTGTGTCTGATGCCCACAGGTGTTTTTCGGTAGC----TTTCAAAGGGTGTGGGTTATCTGGCTTTCAGT---TAAACAAGTTGCAGCTCTTTCATT-TCTGACCCTGTTCT------TTAATGT------------- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173158373 329 - 174439528 TCGTGTGCAGGCACACGTGCACAGCCACCTCTCTCAGCTGCTGACAGGC-GTCTGttagtctgtggtattttcttaaagacctacattttgaaaattttagcCAGTTTCTT-----TCTCAGATCTGTGGAACAGAGTTT-CTCTtag--------tgtgtgtgagtatgtgacAGAGTGCGGGAGAGAGAGACGCACA--CGCAACCTGAAGTCAGCACGTGAGCCTTGGGTGTCGTGTCTGATGCCCACAGGTGTTTTTCGGCAGC---TTTTCAAAGGGTGTGGGTTACTTGGCTTTCAGT---AAAACAGTTTGCAGCTCTTTCATT-CCTGACCCTGTTCT------TTAATGT------------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89604447 329 - 91010382 TCGTGTGCAGGCACACGTGCACAGCCACCTCTCTCAGCTGCTGACAGGC-GTCTGTTAGTCTGTGGTATTTTCTTAAAGACCTACATTTTGAAAATTTTAGCCAGTTTCTT-----TCTCAGATCTGTGGAACGGAGTTT-CTCTTAG--------TGTGTGTGAGTATGTGACAGAGTACGGGAGAGAGAGACGCACA--CGCAACCTGAAGTCAGCACGTGAGCCTTGGGTGTCGTGTCTGATGCCCACAGGTGTTTTTCGGCAGC---TTTTCAAAGGGTGTGGGTTACTTGGCTTTCAGT---AAAACAGTTTGCAGCTCTTTCATT-CCTGACCCTGTTCT------TTAATGT------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151091 332 - 204313951 TCGTGTGCAGGCACACGTGCATAGCCAC--CTCTCAGCTACTGGCTGGC-ATCTGTTAGTCTGTGATATTTACCTAAAGACCTACATTTTGAAAACTTTAGCCAGTTTTTT-----TCTCAAATCTGTGGAACATAATTT-CTCTGAG--------TGTGTGTGAGTATGTGATAGATTATGGGAGAGAGAGACACACGCTCCCAACCTGAGGTCGGCATGTGAG-CTTGGCTGTTGCGTCTGATACCCACAGATGTTTGTCAGCATT----CTTCAAAGTGTGTGGGTTATTTGGCTTTCAGTTTAGAAACAATCTGCAG----GTCATTGCCTGACCCTGTTCC------TTAATGA--------CACTT i calJac3.chr2 I 154 C 0 s mm10.chr13 46088731 309 - 120421639 CAGGGTTAGGGTTAGAGAATAAAGCTACGTC-ATTATTTTTTGACTAAC-ACCTGTTAATTTATGATATATCCTTAAAGGCATATATTTTGAGAGTCT--------------------TCACATAAGTGTATCATCATTTATTCTTGG--------TATGAGC-----------------------TGAGATTCTCAGG--CTCAGCTAATACTCAGCCTTAGGAGTTAATTTGTTTTAATCAATA-TTACAGGTGTTTT--GGCAGGTGTTCTTCAGGGCTTGTGTGTCACTTGTCTTTTAGT---GAAATTGCCTTAGGTTC--CAAGTGCCTGGCTTTAATCTAGGGACTTATTGTGGGTTTGACACTT i mm10.chr13 C 0 I 42 s canFam3.chr34 30173895 298 - 42124431 --CTGTGTAGCC---TGTGTGTAGTTACCTTT----GCTGCCCTGGGACTATCTTTTCATTTTTGATATTGCTCTAAAAACCTATATTTTGGGAAGTTTGGGTGGTTTGATGTGAATCTCAAATCTGGAGATCAGATTTA-TTGTGGAGCATCATTTGCACATGAGTGT---------TGTGAGAGAGACGGATATGCT--TACAACCTGACGTTAGGATGTGGGCCTTTGATG------CTGAT---------------TTGGGACC----CT-----GTGTGTGGGCTCTT----GTTTGCT---GAAGCG---TTAGGCTC-TTCAGTGCCAG-CACTGTC--------TCACTGTGG---TGATGCTT i canFam3.chr34 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=76715.000000 s hg38.chr3_KI270935v1_alt 42223 48 + 197351 GCTAAATATCTGCTGGTATCTGGTGTGGCCTTTAGAGGTTTTACATTT s panTro4.chr3_GL389630_random 6645 41 + 103936 GCTAAATATCTGCTGGTAT-------GGCCTTTAGAGGTTTTACGttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199688672 41 + 202140232 GCTAAATATCTGCTGGTAT-------GGCCTTTAGAGGTTTTACATTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180272375 37 - 181584905 ----AATATCTGCTGGTAT-------GGCCTTTAGAGGTTTTACATTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173158702 37 - 174439528 ----AATATCTGCTGGGAT-------GGCCTTTagaggttttacattt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89604776 37 - 91010382 ----AATATCTGCTGGTAT-------GGCCTTTAGAGGTTTTACATTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151423 41 - 204313951 GCTGAGTATCTGCTGGTAT-------GGCCTTTAGAGGTTTCACATTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30174193 41 - 42124431 GTCAGATATTTGGTGTTAC-------AGCCTCTAGATACTTTCTATTT i canFam3.chr34 C 0 I 15 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=23882.000000 s hg38.chr3_KI270935v1_alt 42271 14 + 197351 TTATATTAAAAAAA s panTro4.chr3_GL389630_random 6686 14 + 103936 ttatattaaaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199688713 14 + 202140232 TTATGTTAAAAAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180272412 14 - 181584905 TTATATTTAAAAAA i macFas5.chr6 C 0 I 315 s papAnu2.chr6 173158739 14 - 174439528 ttatattaaaaaaa i papAnu2.chr6 C 0 I 4 s chlSab2.chr4 89604813 14 - 91010382 TTATATTAAAAAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151464 14 - 204313951 TTATATTTAAAAAA i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=3314.000000 s hg38.chr3_KI270935v1_alt 42285 3 + 197351 AAA s panTro4.chr3_GL389630_random 6700 3 + 103936 aaa i panTro4.chr3_GL389630_random C 0 I 2 s ponAbe2.chr3 199688727 3 + 202140232 AAA i ponAbe2.chr3 C 0 I 7 s macFas5.chr6 180272741 3 - 181584905 aga i macFas5.chr6 I 315 C 0 s papAnu2.chr6 173158757 3 - 174439528 aga i papAnu2.chr6 I 4 C 0 s chlSab2.chr4 89604827 3 - 91010382 AAA i chlSab2.chr4 C 0 I 2144 s calJac3.chr2 151478 1 - 204313951 --A i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=12930.000000 s hg38.chr3_KI270935v1_alt 42288 20 + 197351 GAAGTCGGATGGTTTCTTGT s panTro4.chr3_GL389630_random 6705 20 + 103936 GAAGTCAGATGGTTTTTTGT i panTro4.chr3_GL389630_random I 2 C 0 s ponAbe2.chr3 199688737 20 + 202140232 GAAGTCAGATGGTTTTTTGG i ponAbe2.chr3 I 7 C 0 s macFas5.chr6 180272744 20 - 181584905 gaaGTCAAATGTTTTTCTGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173158760 20 - 174439528 aaagtcaattttttttttga i papAnu2.chr6 C 0 I 315 s calJac3.chr2 151479 18 - 204313951 GAAGT-AAATGGTTTTTGG- i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e chlSab2.chr4 89604830 2144 - 91010382 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=609209.000000 s hg38.chr3_KI270935v1_alt 42308 380 + 197351 AATATGGTggccctccgtatccatcggttccacatgtgtggtttcaaccaactatgtactgaaaataaaattgcatccttac-aaacacgcagacttttttttttccttgtcattgttcgctaagcaacacagtgtagcagctatttacctagcatttacattgtattaggtactatgagtaatcctggagttgctgtacaacttaaatgtaaaacttgaaatga-ggatgatttaaaatatggaggaggatgtgcataggttatatgcaaatactctgccattttatattagggacttgagcatccacggattttggtgtccgtgggggtcctggacccaacctgccacggatacgcagggacgac--tATTTGGCATAGAGG s panTro4.chr3_GL389630_random 6725 377 + 103936 AATATGGTggccctccgtatctatctgttccacatgtgtggtttcaaccaactatgtactgagaataaaattgcatccttac-aaatacgcagactttttttt--ccttgtcattgttcgctaagcaacacagtgtagcagctatttacctagcatttacattgtattaggtactatgagtcatcctggagttgctgtacaacttaaatgtaaaacttgaaatga-ggatg-tttgaaatatggaggaggatgtgcgtaggttatatgcaaatactctcccattttatattagggacttgagcatccacggattttggtatccgtgggggtcctggacccaacctgccacggatacgcagggacgac--tATTTGGCATAGAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199688757 379 + 202140232 AATGTGGTggccctccgtatccatcggttccacatgtgtggtttcagccaactatgtattgaaaataaaattgcatcgttac-aaatatgcagacttttttt---ccttgtcattgttccctaaacaacacagtgtaacagctatttatgtagcatttacattgttttaggtactatgagtaatcctggagttgctgtaaaacttaaatataaaaccttaaatga-ggatgatttaaaatatggaggagaatgtgcataggttatatgcaaatactctcccattttatattagggacttgagcaaccacggattttggtatccgtgggggtcctggacccaacctggcatggatacgcaaggacgactgTATTTGGCATAGAGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180272764 379 - 181584905 AATATGGTggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac-aaatatgcagacttttttt---ccccgtcattgttccctaaacaacacagtttaacaactatttacgtagcatttacattgtattaggtactgtgagtaatcctggagttgttgtaaagcttaaatgtaaaactttaaatga-ggatgatgtaaagtatagaggaggatgtgcataggttatatacaaatactcttccattttatattagggacttgagcatccacggattttagtatccatgggggtcctggacccaacctgccacggatacgcagggacgattgTGTTTGGCATAGAGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173159095 376 - 174439528 aatatggtgGCCCTCCATACACATCGGTTCCACATGTGTGGTTTCAACCAGCTATGTATTGAAAGTAAAATTGCATCCTTAC-AAATATGCagacttttttt---ccttgtcattgtTCCCTAAACAACACGGTTTAACAACTATTTacgtagcatttacattgtattaggtactgTGAGTGATCCTGGAGTTGTTGTaaagcttaaatgtaaaactttaaatga-ggatgatttaaaatata---gaggatgtgcataggttatatacaaatactcTTCCATTTTATattagggacttgagcatccacggATTTTAGTATCCATGGGGGTCCTGGACCCAACCTGCCACGGATACGCAGGGACGACTGTGTTTGGCATAGAGC i papAnu2.chr6 I 315 C 0 s chlSab2.chr4 89606974 379 - 91010382 AATATGATggccgtctgtacccgttggttccacatgtgtggtttcaaccagctatgtattgaaagtaaaattgcaaccttac-aaatatgcagacttttttt---ccccgtcattgttccctaaacaacacagtttaacaactatttacgtagcatttacattatattaggtactgtgagtaatcctggagttgttgtaaagcttaaatgtaaaacttgaaatga-ggatgatgtaaagtatagaggaggatgtgcataggttacatacaaatactcttccattttatattagggacttgagcatccacggattttagtatccatgggggtcctggacccaacctgccacggatacgcagggacgactgTGTTTGGCATAGAGC i chlSab2.chr4 I 2144 C 0 s calJac3.chr2 151497 375 - 204313951 -ATATGGTggccctccatatccatgggttccacatgtgtggtttcaaccaactatgtgttggagatacagttgtatccttactgaacatgcagactttttt----ccttgtcattgttccttaaacaacacagcatgacaactacttatatagcatttacattgcgttaggtactatgagtaatcctggagttgtcgcaaaactgaagtgtacagctttaagtgagggatgatttaaagtctggaggaggatgtgcataggttatatgcagatactctcccatttcatattagagac--aaacatccacagattttggtatccatgggggtcctggagccagtctgccatggatacacagggatgac--tATTTGGTATAGAGG i calJac3.chr2 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e canFam3.chr34 30174234 15 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=-2105.000000 s hg38.chr3_KI270935v1_alt 42688 2 + 197351 C----C s panTro4.chr3_GL389630_random 7102 2 + 103936 C----C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689136 6 + 202140232 CCTTTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180273143 6 - 181584905 CCTTTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173159471 6 - 174439528 CCTTTC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89607353 6 - 91010382 CCTTTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151872 6 - 204313951 CCTTTG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30174249 2 - 42124431 -CT--- i canFam3.chr34 I 15 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e mm10.chr13 46089040 42 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=117184.000000 s hg38.chr3_KI270935v1_alt 42690 63 + 197351 TAATGCTTTTACCAAGGACAGCCGCTGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagta s panTro4.chr3_GL389630_random 7104 63 + 103936 TAATGCTTTTACCAAGGACAGCCGCTGCAGCCTGTGA-TCCCTGAGAC--gag--tgtgagttcagta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689142 63 + 202140232 TAATGCTCTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcagtg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180273149 63 - 181584905 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAC--gag--tgtgagttcaggg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173159477 63 - 174439528 TAATGCACTTACCAAGGACAGCCGCAGCAGGCTGTGA-TCCCTGAGAT--GAG--TGTGAGTTCAGGG i papAnu2.chr6 C 0 I 1113 s chlSab2.chr4 89607359 58 - 91010382 TAATGCACTTACCAAGGACAGccgcagcaggctgtga-tccctgagat--gag--tgtgagtt----- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151878 61 - 204313951 TGATGCCATTACCAAGGACAAC--CAGCAGGTTGTGA-TCCCCAAGAC--Aaa--cgtgagttcagtg i calJac3.chr2 C 0 C 0 s mm10.chr13 46089082 62 - 120421639 TAATATATTTACCAAGGAAAA---CAGGAAATCGTAG-TACCCGAGGC--AAGGATGTAAGATTGGTG i mm10.chr13 I 42 C 0 s canFam3.chr34 30174251 60 - 42124431 TAATGCATTTATCAAGGAAAAC------ACATTGTAACTTTCTGATactagag--tatgagcctagcg i canFam3.chr34 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=358772.000000 s hg38.chr3_KI270935v1_alt 42753 187 + 197351 agggcagagtttttgttctggttctcagctgtgtcccagcacctgggattgtccctggcatac-------agtagatgctt-----agaaaagatttgatgaGAGGGTGGCCGTACATGAGGG-GAAATTTTCCTCAGTATCAAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCTCAGGTCTGCTGCCGTT s panTro4.chr3_GL389630_random 7167 187 + 103936 agggcagagtttttgttctggttctcagctgtgtcccagcacctgggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgaGAGGGTGGCCGTACACGAGGG-GAAATTTTCCTCAGTATCAAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCTCAGGTCTGCTGCCATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689205 187 + 202140232 agggcagagtttttgttctggttctcagctgtgtcccagcacctaggattgtccctggcacac-------agtagatgctt-----agaaaagatttgAGGAGAGGGTGACCATACATGAGGG-GAAATTTTGCTCAGTATCAAAACATGTTGAAACTCACACGCTTCCAAGATGACGTATTCTCAGGTTTCCCGCCGTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180273212 185 - 181584905 agggcagagtttttgttctgggtctcagctgtgtcccagcacctaggattgtccctggcacac-------agtagatgctt-----agaaaagatttgatgagagggtgaGCATAAATGAGGG-GAAATTTTCCTCAGTATCAAAAC--ATTGAAACTCACATGCTTCCAAGATGGCGTATTCTGAGGTCTCCTGCCGTT i macFas5.chr6 C 0 I 319 s papAnu2.chr6 173160653 187 - 174439528 aGGGCAGAGTTTTTGTTCTGGGTCTCAGCTGTGTCCCAGCACCTAGGATTGTCCCttgcacac-------agtagatgctt-----agAAAAGATTTGATGAGAGGGCGACCATAAATGAGGG-GAAATTTTCCTCAGTATCAAAACATATTGAAACTCACATGCTTCCAAGATGACGTATTCTGAGGTCTCCTGCCGTT i papAnu2.chr6 I 1113 C 0 s chlSab2.chr4 89607417 176 - 91010382 -----------tttgttctgggtctcagctgtgtcccagcacctaggatggtccctggcacac-------agtagatgctt-----aggaaagatttgatgaGAGGGCGACCATAAATGAGGG-GAAATTTTCCTCAGTATCAAAACATGTTGAAACTCACATGCTTCCAAGATGACGTATTCTGACGTCTCCTGCCGTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 151939 185 - 204313951 agggcagagtttttgttctggttctcagctgtgtcccagcacctaggattgtccctggcacag-------agtagacattt-----agaaaagattcgatgaGAGGGTGGGCATACATGAGGG-GAAATTTTCCTTAGTATCAGAAAATGTGGAAGCTCAC--GCTTCCATGATGACGTAGTCTCAGGTTTCCTGCCATT i calJac3.chr2 C 0 C 0 s mm10.chr13 46089144 171 - 120421639 -------AGTATAGGCTCT-GTTCTTGGCTGTGTCC---TTCACAGAAGTGT-TCTGACACACTATGATTAACAAGTACCTGAAGGAAAAAAGTATCAATGGGACACTGACCATAGATGAAGGTGACATTTTCCTCAAGATCAAAGATTGTTCAGTCTAACATA-------------GTGATCTTAGCTCTTTCTT---- i mm10.chr13 C 0 C 0 s canFam3.chr34 30174311 183 - 42124431 acggctggatgtctgtcccagtcct-aggtgtgtcccagcacata--ctccaccctggcacat-------ggtaggtgctc-----agaaatgaggtgagaaatggatgGCCACAAGTGAGGA-GAGATTCTGTACAGCATAAGAACA-GTGGAACTTTATATGCTTCAGTGACTTCGTAATCTCATATTTTCTGTAATT i canFam3.chr34 C 0 C 0 e rheMac3.chr6 1508 6523 + 180491593 M e nomLeu3.chr11 120785647 3854 + 123690457 I a score=42144.000000 s hg38.chr3_KI270935v1_alt 42940 13 + 197351 GCCATTCTCTGCC s panTro4.chr3_GL389630_random 7354 13 + 103936 GCCGTTCTCTGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689392 13 + 202140232 GCTGTTCTCTGCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 8088 13 + 180491593 GCCGTTCTCTGCC i rheMac3.chr6 M 6523 C 0 s macFas5.chr6 180273716 13 - 181584905 GCCGTTCTCTGCC i macFas5.chr6 I 319 C 0 s papAnu2.chr6 173160840 13 - 174439528 GCAGTTCTCTGCC i papAnu2.chr6 C 0 I 550 s chlSab2.chr4 89607593 13 - 91010382 GCAGTTCTCTGCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 152124 13 - 204313951 ACTGTTCTCTGGC i calJac3.chr2 C 0 C 0 s mm10.chr13 46089315 13 - 120421639 ACCATTCTTTGCC i mm10.chr13 C 0 C 0 s canFam3.chr34 30174494 13 - 42124431 ACCATTCTTTGCC i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=37533.000000 s hg38.chr3_KI270935v1_alt 42953 15 + 197351 TTATGTGATGGTGTT s panTro4.chr3_GL389630_random 7367 15 + 103936 TTATGTGATGGTGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689405 15 + 202140232 TTATGTGATGGTGTT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 8101 15 + 180491593 TTATGTGATGGTGTT i rheMac3.chr6 C 0 I 4 s macFas5.chr6 180273729 15 - 181584905 TTATGTGATGGTGTT i macFas5.chr6 C 0 I 4 s papAnu2.chr6 173161403 15 - 174439528 TTATGTGATGGTGTT i papAnu2.chr6 I 550 I 4 s chlSab2.chr4 89607606 15 - 91010382 TTGTGTGACGGTGTT i chlSab2.chr4 C 0 I 232 s calJac3.chr2 152137 15 - 204313951 TTATGTGGTGGTGTT i calJac3.chr2 C 0 C 0 s mm10.chr13 46089328 6 - 120421639 TCATGT--------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30174507 15 - 42124431 TCACACCATGATGTC i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1388282.000000 s hg38.chr3_KI270935v1_alt 42968 479 + 197351 CTGTCTTACCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATGGTGCTGGCTTCTCTCCCACAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCGCAGTTGTCTCTTTAGATCTTAG-AGGAAGAGACAGATGTTTCCTTCCAGAAAGTACTGTATTGTTTGCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AG-GAGGCT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAAACTGTCA-------TAGATACA---TCATTTGCAG--CTTTTCCCATTTTATAA-TTACTTTCCTATATGATCTTGTGTTATTTCT s panTro4.chr3_GL389630_random 7382 479 + 103936 CTGTCTTACCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCATGCCCTTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTCGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACTGTGCATTATAACATGGACGGCATTCCCACCAGCTACGAGGGGCAGGTGATGGTGCTGGCTTCTCTCCCACAGCTGGAAAGAAGGCTGGGACAATGGGGCCCATCTCACAGTTGTCTCTTTAGATCTTAG-AGGAAGAGACAGATGTTTCCTTCAAGAAAGTACTGTATTGTTTTCTAAATTGCACTTGAAATTTCTATCACTG-GAGGATGGA--------AG-GAGGCT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAAACTGTCA-------TAGATACA---TCATTTGCAG--CTTTTCCCATTTTATAA-TTACTTTCCTATATGATCTTGTGTTATTTCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689420 471 + 202140232 CTGTCTTACCAGAGGCTGTGGTCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTACCTCCAGAGCAGCTGGCCACGTGCCTGCCCGGCTTTTCAGAGACAGCCATGATCTTCACTGGCGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAATGTGGACGGCATTCCCACCAGCTACAAGGGGCAGGTGATGGTGCTGGCTCCTCTCCCACAGCTGGAAAGAAGGCTGGGATGACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGACAGATGTTTTCTTCAAGAAAGTACAGTATTGTTTTCTAGATCGCACTTTAAATTTCTATTACTG-GAGAATGG---------AG-GGGGCT-----------------------------TAATA---------------------ATTTATTTCTCCTTAGTAAAGTGTCA-------TAGATACA---TCATTTGCAG--CTTTTTCCATTTTATAA-TTACTTTCTTATATGATCTTGTGT------- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 8120 480 + 180491593 CTGTCTTCCCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTGCCTCCGGAGCAGCTGGCCACGCGCCTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATGGTGCTGGCTGCCCTCCCACAGCTGGAAAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCGTAG-AGGAAAAGACAGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AG-GGGGCT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAAATTGTCA-------TAGATGCA---TCATTTGCAGCCTTTTTTCCATTTTATAG-TTACTTTCCTATATGATCTCGTGTTAtttct i rheMac3.chr6 I 4 I 302 s macFas5.chr6 180273748 480 - 181584905 CTGTCTTCCCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTGCCTCCGGAGCAGCTGGCCACGCGCCTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGGTGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATGGTGCTGGCTGCCCTCCCGCAGCTGGATAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCTTTAGATCGTAG-AGGAAAAGACAGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AG-GGGGCT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAAATTGTCA-------TAGATGCA---TCATTTGCAGCCTTTTTTCCATTTTATAG-TTACTTTCCTATATGATCTCGTGTTATTTCT i macFas5.chr6 I 4 C 0 s papAnu2.chr6 173161422 478 - 174439528 CTGTCTTCCCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACctgcctccggagcagctggccACGCGCCTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCCGGTGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATGGTGCTGGCTGCCCTCCCACAGCTGGATAGAAGGCTGGGACAACGGGGCCCACCTTGCAGTTGTCTCtttagatcttag-aggaaaagacAGATGTTTTCTTCAAGAAAGTTCTGTCTTGTTTTCTAGATTGTACTTTAAATTTCTATTACTG-GAGGATGG---------AG-GGATCT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAAATTGTCA-------TAGATACA---TCATTTGcag--ttttttccattttataa-ttacTTTCCTATATGATCTTGTGTTATTTCT i papAnu2.chr6 I 4 C 0 s chlSab2.chr4 89607853 471 - 91010382 CTGTCTTCCCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTGCCTCCGGAGCAGCTGGCCATGCGCCTGCCCGGCATTTCAGAGACAGCCATGATCTTCGCTGATGTGGACGTCACGAAGGAGCCGATCCCTGTCCTCCCCACCGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGGCAGGTGATGGTGCTGGCTCCCCTCCCGCAGCTGGATAGAAGGCTGGGACAACGGGACCCACCTTGCAGTTTTCTCTTTAGATCTTAG-AGGAAAAGACAGATGTTTTCTTCAAGAAAGTACTGTCTTGTTTTCTAGATTGTATTTTAAATTTCTATTACTG-GAGGATGG---------AG-GGGGCT-----------------------------TAATA---------------------ATTTATTCCTCCATAGTAAATTGTCA-------CAGATACG---TCATTTGCAG--CTTTTTCCATTTTATAA-TTACTTTCCTATATGATCTCGTGT------- i chlSab2.chr4 I 232 C 0 s calJac3.chr2 152152 473 - 204313951 CTGTCTTGCCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGCTGCACCACCTGCCTCCAGAGCAGCTGGCCACGCGCCTCCCTGGCATTTCGGAGACAGCCATGATCTTTGCTGGCGTGGACGTCACGAAGGAGCCGATCCCTGTGCTCCCCACTGTGCATTATAACATGGGCGGCATTCCCACCAACTACAAGGGACAGGTGATGGTGCCAGGTCCTCTCCCACAGCTGGAAAGAAGGCCGGGACCGTGGGGCCCACCTTGCAGTTGTCTCTTTAGATCTTAG-AGGAAAAGACAGAGATTTTCTTCCAGAAAGTACTGTGTTGTTTCATAGATTGCACTTTAAATTT-----ACCA-GAGGATGG---------AC-GGAGGT-----------------------------TAATA---------------------ATTTATTCCTCCTTAGTAGGTTGTCA-------TGGATACA---TCATTTGCAG--CTTTCTCCATTTTATAA-GTACGTTCCTGAATGATGATGTGTTATTTAT i calJac3.chr2 C 0 C 0 s mm10.chr13 46089334 435 - 120421639 -TGTATTTGCAGAGGCTGTGGCCCTGAGAAAGATCACGTCTACCTGCAGTTGCATCATCTGCCTCCTGAGCAACTGGCCACACGTCTACCCGGAATTTCAGAGACGGCCATGATCTTCGCTGGTGTGGATGTCACTAAGGAGCCCATCCCAGTCCTCCCCACTGTGCATTACAACATGGGTGGGATTCCCACTAACTACAAGGGACAGGTGATGGTG------------------------ACAAGGCT---------------ACTTGACAAAAATCCCTTTAGTGCTTAG-AGAATGCAGTGCATTT---------GATAGTGTAATGGTAGTTATCAAAT---GCTATACCTGCCAGGCAGTGAGAGGCTAGGTTATGTTTTG-GGGTTT-----------------------------CATTT---------------------ACTTGGTAATAACCAATAGAATGTTAATTCCCTTATACCTA---TAATACTAAGCACTGTTACCATTTTACAT-TTGATTTTCTATATTATTTAC---------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30174522 526 - 42124431 CTTTTCCACCAGAGGCTGTGGCCCCGAAAAAGACCATGTGTACCTGCAGTTGCACCACCTACCGCCCGAGCAGTTGGCCATACGTCTGCCTGGCATTTCAGAGACGGCCATGATCTTTGCCGGTGTGGATGTCACCAAGGAGCCAATCCCCGTCCTTCCCACTGTGCATTATAACATGGGTGGCATTCCCACCAACTACAAGGGGCAGGTGACCAAGCCCAG-ACCCTTCCATGGTGGGGAATAGGGCAGGAATGATGAG-CCCATCTCACAGTTGTCCCTTGCGAGCTCAGTTAGTGAAGACAGATGGTTTCCTC-AGAAAGCACTGTGTTGTGTTGGCAACT--CCCTTGAGTTGCT---GCTG-GAGGGCAA---------AGCGGGGCTCGGGTATATTCCAGGGTTCACATTCACTCTAATAGCGAGCAGTCACTGGTCACTTACTGATCCCTCCATGGTACATAGTCG-------TGGATGCAATGTCATTTGCAG--CTTTTCCCTGTTTAGGATTTATTTTCCTTTATGATCTCTTGTTACTTTT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=12326.000000 s hg38.chr3_KI270935v1_alt 43447 35 + 197351 AATGAGCTTATACATCAAGGGATCTTTATAATTCC s panTro4.chr3_GL389630_random 7861 35 + 103936 AATGATCTTATACATCAAGGGATCTTTATAATTCC i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 180274228 35 - 181584905 AATGATCTTGTACATCGAGGGATCTTTCTAATTCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173161900 35 - 174439528 AATGATCTTGTACATCAAGGGATCTTTCTAATTCC i papAnu2.chr6 C 0 C 0 s calJac3.chr2 152625 19 - 204313951 AATGATTTTCTACATCGAG---------------- i calJac3.chr2 C 0 C 0 s mm10.chr13 46089769 15 - 120421639 AGTGAACTTATAAAT-------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 30175048 4 - 42124431 ACTG------------------------------- i canFam3.chr34 C 0 C 0 e rheMac3.chr6 8600 302 + 180491593 I e chlSab2.chr4 89608324 0 - 91010382 C e ponAbe2.chr3 199689891 0 + 202140232 C e nomLeu3.chr11 120785647 3854 + 123690457 I a score=270058.000000 s hg38.chr3_KI270935v1_alt 43482 142 + 197351 TATTTCTAATGATCTTGTACATCGAAGGATCTTTATAATTCATACCTGTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTTG--------TTGGGCGAGGTGGGTGGAAGCTGTTACTTTCCCCGCATAGATGAA s panTro4.chr3_GL389630_random 7896 142 + 103936 TATTTCTAATGATCTTGTACATCGAGGGATCTTTATAATTCATACCTTTGAGTGGTTTGTGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTTG--------TTGGGCGAGGTGGGTGGAAGCTGTTACTTTCCCTGCGTAGATGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199689891 142 + 202140232 TATTTCTAATGATCTTGTACATCGAGGGATCTTTATAATTCACTCCTTTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGCCTCCTTG--------TTGGGTGAGGTGGGTGGAAGCCGCTACTTTCCCTGCGTAGATGAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 8902 142 + 180491593 TATTTCTAATGATCTTGTACGTCGAGGGATCTTTCTAATTCCTACCTTTGAGTAGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTCCTTG--------TTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATAGATGAA i rheMac3.chr6 I 302 C 0 s macFas5.chr6 180274263 100 - 181584905 ------------------------------------------TACCTTTGAGTGGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTCCTTG--------TTGGGCAAGGTGGGCGGCAGCTGTTACTTTCCCTGCATAGATGAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173161935 99 - 174439528 ------------------------------------------TACCTTTGAGTGGTTTGCGGTTTACACAGAGCTTGTCAGTCACTTAGGCTACTTG--------TTGGG-GAGGTGGGCAGCAACTGTTACTTTCCCTGCGTAGATGAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89608324 142 - 91010382 TATTTCTAATGATCTTGTACATCGAGGGATCTTTCTAATTCCTACCTTTGAGTTGTTTGCGGTTCACACAGAGCTTGTCAGTCACTTAGGCTACTTG--------TTGGGCGAGGTGGGCGGCAGCTGTTACTTTCCCTGCGTAGATGAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 152644 116 - 204313951 --------------------------GGATCTTTATAATTCGTACCTTTGAGTGGTCTGCAGTTCACATAGAGCTTGTTGGTCGCTTAGGCTCCTTG--------TCGGGTGAGGTGGGTGGAAGCTGTTACTCTCCCTGCGTAGATGAA i calJac3.chr2 C 0 C 0 s mm10.chr13 46089784 105 - 120421639 ------TAGTGA---------------------TATAATTGGTAC--TTGAGTTATAAGCAGTTTACA-AGTGCTTATCAG---CTGGTCCTTCTGG--------TTTGGACTCCTGGTCAGCA-CCACTAC-CCCCCTTCACAGATG-- i mm10.chr13 C 0 C 0 s canFam3.chr34 30175052 138 - 42124431 ---------TGACCTTTTAAATTGTGTGCTCTTTATAACCAATACTTTGGAGTGGTTTGTAGTCCACCCAGAGCCTTTTGGTT-CTTGACTTTTTTGGCCTTTCCTCAGGCAAGTGGCTGGGGATCTACTCC--TCCCTTTATAGATGAA i canFam3.chr34 C 0 I 191 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=283169.000000 s hg38.chr3_KI270935v1_alt 43624 121 + 197351 GAGGTGAACAGGGGGTAGAAGAGTCTGGAACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCTGGAGCACAGGT-GGTGAGGG----CCTCGGGAACATGGGACA s panTro4.chr3_GL389630_random 8038 121 + 103936 GAGGTGAACAGGGGGTAGAAGAGTCTGGAACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCTGGAGCACAGGT-GGTGAGGG----CCTCGGGAACATGGGACA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690033 121 + 202140232 GAGGTGAACAGGGGGTAGAAGAGTCTGGAACATCAGTCTCCCCTGCTGATGTTCCTCCACCTGCCGTGCTCCTGGGTCTGAGCCGGAGCACAGGT-GGTGAGGG----CCTTGGGAACATGGGACA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 9044 121 + 180491593 GAGGTGAACAGGGGGTAGAAGAGTCTGGAACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCAGAGTGCAGGT-GGTGAGGG----CCTCGGGAACATGGGACA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180274363 121 - 181584905 GAGGTGAACAGGGGGTAGAAGAGTCTGGAACATCAGTGTCACCTGCTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGTGCAGGT-GGTGAGGG----CCTCGGGAACATGGGACA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173162034 121 - 174439528 GAGGTGAACGGGGGGTAGAAGAGTCTGGAACATCAGTGTCACCTACTGATGTTCCTCCACCTGCCGTGCTCCCGGGTCTGAGCCGGAGTGCAGGT-GGTGAGGG----CCTCGGGAACATGAGACA i papAnu2.chr6 C 0 I 507 s chlSab2.chr4 89608466 121 - 91010382 GAGGTGAACGGGGGGTAGAAGAGTCTGGAACATCAGTGTCACCTACTGATGTTCCTCCACCTGCCGTGCTCCCAGGTCTGAGCTGGAGCGCAAGT-GGTCAGGG----CCTCGGGAACATGGGACA i chlSab2.chr4 C 0 I 369 s calJac3.chr2 152760 121 - 204313951 TAGATGAACAGGGAGTAGAAGAGTCTGAAACATCAGTCTC-CCTGCTGATGTTCCTCCACCTGCTGTGCTCTCGGGTCTGAGCCAGATCACAGGTAGGAGAGGT----CCTTGGGGACATAGGACA i calJac3.chr2 C 0 C 0 s mm10.chr13 46089889 92 - 120421639 ----------------------GTCCTGTTCTCC---TCCTCCCTTTAGTGTTCCATCACCTGTCATATTCCTTAGTTAAAT--------CAGGT-GGTGACTGACACTCTGGGAAACCTAAACCA i mm10.chr13 C 0 C 0 e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=170593.000000 s hg38.chr3_KI270935v1_alt 43745 85 + 197351 CGGGGGACAGTCGCAGATGCTGACATTGGAGGCCCTCTGACCTGCTTGT----AACAGC-AGGTGCTCAGGGGCAGAGGGGAAACTGGGG s panTro4.chr3_GL389630_random 8159 85 + 103936 CGGGGGACAGTCGCAGATGCTGACATTGGAGGTCCTCTGACCTGCTTGT----AACAGC-AGGTGCTCAGGGGCAGAGGGGAAACTGGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690154 85 + 202140232 CGGGGGACAGTCGCAGATGCTGACATTGGAGGTCCTCTGACCTGCTTGT----AACAGC-AGGTGCTCAGGGGCAGAGGGGAAACTGGGG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 9165 83 + 180491593 -CAGGGACAGTCGCAGACGCTGACATTAGGGGTCCTCTGACCTGCTTGT----AACAGCAAGGTGCTC-AGGGCAGA-GGGAAATGGGGG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180274484 82 - 181584905 -CAGGGACAGTCGCAGACGCTGACATTAGGGGTCCTCTGACCTGCTTGT----AACAGC-AGGTGCTC-AGGGCAGA-GGGAAATGGGGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173162662 83 - 174439528 CTGGGGACAGTCGCAGATGCTGACATTGCGGGTCCTCTGATCTACTGGT----CACAGC-AGGTGCTC-GGGGCAGA-GGGAAACGGGGG i papAnu2.chr6 I 507 C 0 s chlSab2.chr4 89608956 82 - 91010382 CTGGAGACAGTCGCAGATGCCGACATT-GGGGTCCTCTGATACACTGGT----CACAGC-AGGTGCTC-GGGGCAGG-GGGAAACGGGGG i chlSab2.chr4 I 369 C 0 s calJac3.chr2 152881 83 - 204313951 CGGAGGACAGTCACAGATGCTGACATTGGAAGTCCTCTGACCTGCTTGT----AACAGC-AGGTACTC--GGGCAGAGAGGAAACTGGGG i calJac3.chr2 C 0 C 0 s mm10.chr13 46089981 57 - 120421639 --------------------------------TCCTTTGACCTGTTGGTAGCAAACAGC-AAGAGTTTTGGAGCAAAAGGAGAACTGGGG i mm10.chr13 C 0 I 35 e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=389916.000000 s hg38.chr3_KI270935v1_alt 43830 186 + 197351 TATACATTCGGAAGTTTCCTTCTGAAGAAGAGTAGCTATGGTCCTTACTTCCTTCTTAGATATGGTCTTTACTTCCCtctcttt-gtttcttggagatggagactcgctc--tgtcgcttaggctggagtgcaatggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct s panTro4.chr3_GL389630_random 8244 188 + 103936 GATACATTCGGAAGTTTCCCTCTGAAGAAGAGTAGCTATGGTCCTTACTTCCTTCTTAGATATGGTCTTTACTTCCCTCTCttt-gtttcttggagatggagactcgctctgtgtcgcttaggctggagtgcaatggcacgatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690239 186 + 202140232 GATACATTTGGAAGTTTTCCTCTGAAGAAGAGTAGCTATGGTCCTTACTTCCTTCTTAGATATGGTCTTTACTTCCCCCTCttt-gtttcttggacatggagactcgctc--tgtcgcttaggctggagtgcagtggtgcaatatcagctcactgcaacctccgcctcccaggttcaagtgattcttct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 9248 180 + 180491593 G--ACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCcttacctccctcttagatgtggtctttccttcc----cttt-ttgtcttggagattcagtctcgctc--tgtcgcttaggctggagtacaatggcgcaatctcggctcacttcaacctccgcctcccaggttcaagcgattcttct i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180274566 180 - 181584905 G--ACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTTACCTCCCTCTTAGATATGGTCTTTCCTTCC----Cttt-ttttcttggagattcagtctcgctc--tgtcgcttaggctggagcacaatggcgcaatctcggctcactgcaacctccgcctcccaggttcaagcgattcttct i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173162745 182 - 174439528 G--ACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTAtggtccttccctccctcttagATATggtctttccttcc--ctcttt-ttttcttggagattcagtctcgctc--tgtcgcttaggctgtagtgcagtggcgcaatctcggctcactgcaacctccgccttccagattcaagcgattcttct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609038 182 - 91010382 G--ACATTCGGAAGCTTCCCTCTGAAGAAGAGGAGCTATGGTCCTTACCTCCCTCTTAGATATGGTCTTTCCTTCC--CTCttt-ttttcttggagattcagtctcgctc--tgtcgcttaggctggagtgcagtggcgcaatcttggctcactgcaacctccgccttccaggttcaagcgattcttct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 152964 186 - 204313951 CATACATTTGGAAGTTTCCCTCTGAAGAAGAGTAGCTCTGGTCCTTACTTCCCTCTTAGATGTGGTCTTTACTTCCCtctctttatttttttggagatggagtctcactc--tgtcgcccagactggagtgcaatgacgcaatctcagctgattgcaacctccgcctccta-attcaaatgattcttcc i calJac3.chr2 C 0 C 0 e mm10.chr13 46090038 35 - 120421639 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=237544.000000 s hg38.chr3_KI270935v1_alt 44016 133 + 197351 gcctcagcctcccgagtagctgggattacaggcacctgccatcatgcctggctaatttttatatttttagttgagacggggtttcaccatgttagccagacaggtctcgaacccctgaactcaggtgatccac s ponAbe2.chr3 199690425 133 + 202140232 gcctcagcctcccgagtagctgggattacaggcacccgccatcatgcctgggtaatttttgtatttttagttgagacggggtttcaccatgttagccagacaggtcttgaacccctgaactcaggtgatccac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 9428 133 + 180491593 gcctcagcctcccgagtagctgggattataggcactcgccgtcatgcctcactaatttttgtatttttagttgagacggggtttcaccatgttagccaggcaggtctcgaacccctgacctcaggtgatccac i rheMac3.chr6 C 0 T 9544 s macFas5.chr6 180274746 133 - 181584905 gcctcagcctcccgagtagctgggattataggcactcgccgtcatgcctcactaatttttgtatttttagttgagacggggtttcaccatgttagccaggcaggtctcgaacccctgacctcaggtgatccac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173162927 133 - 174439528 gcctcagcctcccgagtagctgggattacaggcactcgccatcatgcctggctaatttttgtatttttagttgagacggggtttcaccatgttagccagacagatctcgaacccctgacctcaggtgatccac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609220 133 - 91010382 gcctcagcctcccgagtagctgggattacaggcactcgccatcatgcctggctaatttttgtatttttagttgagacggggtttcaccatgatagccagacaggtctcgaacccctgacctcaggtgatccac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153150 132 - 204313951 acctcagcctcccgggtagctgggattacaggcacccaccatcatgcttggctaatttttgcacttttagtaaagacagggtttcaccat-ttagccaggctggtcttgaacccctgatctcaggtgatccac i calJac3.chr2 C 0 C 0 e mm10.chr13 46090038 35 - 120421639 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 8432 0 + 103936 C a score=2345.000000 s hg38.chr3_KI270935v1_alt 44149 2 + 197351 cc s ponAbe2.chr3 199690558 2 + 202140232 cc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180274879 2 - 181584905 cc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163060 2 - 174439528 cc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609353 2 - 91010382 cc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153282 2 - 204313951 tc i calJac3.chr2 C 0 C 0 e rheMac3.chr6 9561 9544 + 180491593 T e mm10.chr13 46090038 35 - 120421639 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I e panTro4.chr3_GL389630_random 8432 0 + 103936 C a score=59760.000000 s hg38.chr3_KI270935v1_alt 44151 35 + 197351 gcctcagcctcccaaagtgctgggattacaagcgt s panTro4.chr3_GL389630_random 8432 35 + 103936 gcctcagcctcccaaagtgctgggattacaagcat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690560 35 + 202140232 acctcagcctcccaaagtgctgggattacaggcgt i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180274881 35 - 181584905 gcctcaacctcccaaagtgctgggattacaggcgt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163062 35 - 174439528 gcctcaacctcccaaagtgctgggattacaggcgt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609355 35 - 91010382 gcctcaacctcccaaagtgctgggattataggcgt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153284 34 - 204313951 acctcagccttccaaagtgtt-ggattacaggcat i calJac3.chr2 C 0 C 0 e rheMac3.chr6 9561 9544 + 180491593 T e mm10.chr13 46090038 35 - 120421639 I e canFam3.chr34 30175190 191 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=19425.000000 s hg38.chr3_KI270935v1_alt 44186 18 + 197351 gagccactgcatgcccga s panTro4.chr3_GL389630_random 8467 18 + 103936 gagccactgcatgcccga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690595 18 + 202140232 gagtcactgcatgcccgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180274916 16 - 181584905 gagccaccgc--gcctgg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163097 16 - 174439528 gagccaccgc--gcctgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609390 16 - 91010382 gagccaccgc--gcctgg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153318 15 - 204313951 gagcca-tgc--gcccag i calJac3.chr2 C 0 C 0 s canFam3.chr34 30175381 18 - 42124431 GATCCAGTCCTTACCTGC i canFam3.chr34 I 191 C 0 e rheMac3.chr6 9561 9544 + 180491593 T e mm10.chr13 46090038 35 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=21314.000000 s hg38.chr3_KI270935v1_alt 44204 9 + 197351 ccTAC--TTCC s panTro4.chr3_GL389630_random 8485 9 + 103936 cCTAC--TTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690613 9 + 202140232 ccTAC--TTCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 17 9 + 180491593 CCTAC--TTCC i rheMac3.chr6 T 9544 C 0 s macFas5.chr6 180274932 9 - 181584905 ccTAC--TTCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163113 9 - 174439528 cctac--ttcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609406 11 - 91010382 ccTACCTCTCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153333 9 - 204313951 ccTGC--TTCC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30175399 9 - 42124431 CCTCC--ATCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46090038 35 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=1025358.000000 s hg38.chr3_KI270935v1_alt 44213 334 + 197351 CTCTCTTTCTCTGACCTGCAGCACAGACACCCTGTTGAGGGAGGTGGGCTTGTGGAGGAATGGGCATCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGGGAATGGCCAGGATCAGATTGTGCCCAGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCTGCACATGGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-ACCCAGACTATTTGAGAAGGCGCAGGAGGTT------------AGtcttttttc-ttt s panTro4.chr3_GL389630_random 8494 334 + 103936 CTCTCTTTCTCTGACCTGCAGCACAGACACCCTGTTGAGGGAGGTGGGCTTGTGGAGGAATGGGCATCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGGGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTTGGCACATGGTGTCAACCGCCTCGGGGCAAACTCGCTGTTGGACCTGGTTGTC--TGGTCAGGCATGTGCCCTGAGCATCGCAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-ACCCAGACTATTTGAGAAGGCACAGGAGGTT------------AGTCttttttc-ttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690622 335 + 202140232 CTCTCTTTCTCTGACCTGCAGCACAGACACCCCGTTGAGGGAGGTGGGCTTGTGGAGGAATAGGCACCTTGACATTTCATCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGCGAATGGCCAGGATCAGATTGTGCCCGGCCTGTACACCTGTGGGGAGGCTGCCTGTGCCTCGGTACATGGTGCCAACCGCCTCGGGGCAAACTCACTGTTGGACCTGGTTGTC--TGGTCAGGCATGCACCCTGAGTATCGAAGAGTCATGCAGATCTAGTAAGTGTTTTCTT-CAGG-AGCCAGACTATTTGAGAAGGCGCAGGAGGTTAC----------AGTCttttttc--tt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 26 337 + 180491593 CTTTCTTTCTCTGGTCTGCAGCACAGACACCCTGTTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCCCTCTTGGACCTGGTCGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTTCGAGAAGGCGCAGGAGGTTAC----------AGTCGTTTTTC--CT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180274941 337 - 181584905 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGCTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCCCTCTTGGACCTGGTCGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCGTGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTCTGAGAAGGCGCAGGAGGTTAC----------AGTCGtttttc--ct i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163122 337 - 174439528 ctctctttctctggtCTGCAGCACAGACACCCTGTTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCTGGGCTGTACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATTGAAGAGTCATGCAGGCCTGGTAAGTGTTTTCTT-CAGG-AGCCAGACTGTTCGAGAAGGCTCAGGAGGTTAC----------AGtcgttttta--ct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609417 337 - 91010382 CTCTCTTTCTCTGGTCTGCAGCACAGACACCCTGTTGGGGGAGGTGGGCTGGTGGAGGTATGGGCACCTTGACATTTCACCTGAAATCTTCCTTTCCACAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCCGGGCTATACGCCTGTGGGGAGGCCGCCTGTGCCTCGGTACATGGTGCCAACCGGCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCGGGCATGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTAAGTGTTTCCTT-CAGG-AGCCAGACTGTCTGAGAAGGCGCAGGAGGTTAC----------AGttgtttttc--ct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153342 343 - 204313951 CTCTCTTTCTCTGACCTGCAGCACAGATACCCTGTTGGGGGAGGTGGGCTTGTGGAGGCATGGGCACCTTGAC-CTTCACCTGAAATCT---TTTCCACAGGTCCTGAGGCACGTGAATGGCCAGGATCAGATCGTGCCTGGCCTGTACGCCTGTGGGGAGGCCGCCTGCGCCTCAGTCCATGGTGCCAACCGTCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGCCGGGCCTGTGCCCTGAGCATCGAAGAGTCATGCAGGCCTGGTGAGTGTTTTCTT-CAGA-AGCCAGACCATTTGAGAAGG--CAGGAGGTTACAAAGTTATGAAGtctttttttcttt i calJac3.chr2 C 0 C 0 s mm10.chr13 46090073 326 - 120421639 CTTTACTTTTGCTACTTCAGGCATAGGAAGTCTGCC-AGGGAAGCAGGCATATGGACGCATAGGTATTTTGTTGCTTCATCTGAAATATTCCT----ACAGGTGCTGAAGCATGTGAATGGCCAGGATCAGATTGTGCCTGGTCTGTATGCCTGTGGGGAGGCTGCCTGCGCCTCAGTGCATGGTGCCAACCGGCTTGGAGCAAATTCTCTCTTGGACCTTGTAGTCTTTGGCAGAGCCTGTGCCCTGAGCATTGCAGAATCTTGCAGGCCTGGTATGTGTTCTCTTCCAGC-TCTCAAGCCATTC---------TAGGAGCCTGCAT--------AGTCTTTATTT--GT i mm10.chr13 I 35 I 814 s canFam3.chr34 30175408 320 - 42124431 -------TCTCTGCCCCTGCATGCAGACATCCCCTGCTGGGAAGCAGACGGGTACAAAC-TGTGCTCCTAAAGTCTTCAC------TCTTCCT-CCTACAGGTTCTGAGGCACGTGAATGGCCAGGATCAGATTGTGCCTGGCCTGTATGCATGCGGGGAGGCCGCCTGCGCCTCGGTGCACGGTGCCAACCGCCTCGGAGCCAACTCGCTCTTGGACTTGGTCGTCTTTGGCCGGGCATGTGCCCTGAGTATCGCAGAGTCCTGCAGACCTGGTATGTGTTTTCTT-CAAGTAGCCAGGCTATTTCAGGAGG--TGAGAGGTTACCA--------TGTCTTGATT----- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120785647 3854 + 123690457 I a score=33752.000000 s hg38.chr3_KI270935v1_alt 44547 17 + 197351 ttttttgagacagggtc s panTro4.chr3_GL389630_random 8828 17 + 103936 ttttttgagacagggtc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690957 17 + 202140232 ttttttgagacagggtc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 363 16 + 180491593 TTTTTTGAGACA-GGTC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180275278 16 - 181584905 ttttttgagaca-ggtc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163459 16 - 174439528 ttttttgagaca-ggtc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609754 16 - 91010382 ttttttgagaca-ggtc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153685 17 - 204313951 ttttttgagacagggtc i calJac3.chr2 C 0 C 0 s canFam3.chr34 30175728 17 - 42124431 TGTAATTGGAAATTGCC i canFam3.chr34 C 0 I 188 e mm10.chr13 46090399 814 - 120421639 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=44842.000000 s hg38.chr3_KI270935v1_alt 44564 17 + 197351 agcccaggctggagtgc s panTro4.chr3_GL389630_random 8845 17 + 103936 agcccaggctggagtgc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690974 17 + 202140232 agcccaggctggagtgc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 379 17 + 180491593 AGCCCAGGCTGGAGTGC i rheMac3.chr6 C 0 I 9651 s macFas5.chr6 180275294 17 - 181584905 agcccaggctggagtgc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163475 17 - 174439528 agaccaggctggagtgc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89609770 17 - 91010382 agcccaggctggagtgc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153702 17 - 204313951 agcccaggctggagtgc i calJac3.chr2 C 0 C 0 e mm10.chr13 46090399 814 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=206513.000000 s hg38.chr3_KI270935v1_alt 44581 125 + 197351 agtggcacagtcatagcagcctcaacctcccgagctcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaatttaaaaaaatt s panTro4.chr3_GL389630_random 8862 125 + 103936 agtggcacagtcatagcagcctcaacctcccgagctcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaatttaaaaaaaat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199690991 124 + 202140232 agtggcacagtcatcatagcctcaacctcccgaactcaagcagtcctcaacacctcaaccttcagagtcccaagtagctgagactacagatgtgcaccaccatacctggctaa-ttaaaaaaatt i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180275311 123 - 181584905 catggcacagtcatagccgcctcaacctcccgggctcgagcagtcctcaacacctccacctgcagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaatttaaaaaaa-- i macFas5.chr6 C 0 I 3 s papAnu2.chr6 173163492 125 - 174439528 cgtggcatagTCAtagctgcctcaacctcccgggctcgaGCAGTCCTCAACACCTCCACCTGCagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaatttaaaaaaatt i papAnu2.chr6 C 0 I 3 s chlSab2.chr4 89609787 125 - 91010382 cgtggcacagtcatagccgcctcaacctcccaggctcgagcagtcctcaacacctccacctacagagtcccaagtagctgggactacagatgtgcaccaccacacctggctaatttaaaaaaatt i chlSab2.chr4 C 0 I 3 s calJac3.chr2 153719 125 - 204313951 agtggcacagtcatggcagcctcagcctcctgggctcaagcagtccttaacaccccaaccttcagagtcccaagtagctggaactacaggtgtgcacccccacacctggctacttttttattttt i calJac3.chr2 C 0 C 0 e rheMac3.chr6 396 9651 + 180491593 I e mm10.chr13 46090399 814 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I e nomLeu3.chr11 120785647 3854 + 123690457 I a score=214597.000000 s hg38.chr3_KI270935v1_alt 44706 92 + 197351 ttttttggtagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagt-cttctgcctcagctttccaaagtat s panTro4.chr3_GL389630_random 8987 92 + 103936 ttttttggtagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagt-cttctgcctcagcttcccaaagtat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199691115 93 + 202140232 tttttttgtagacacagggtctcacaatattgcccaggctggtcttaaactcctagactcaaacagtccttctgcctcagcttcccaaagtac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789501 93 + 123690457 tttttttgtagagacagggtctcacaatattgcccaggctggtcttgaactcctagactcaaacagtccttctgcctcagcttcccaaactat i nomLeu3.chr11 I 3854 C 0 s macFas5.chr6 180275437 93 - 181584905 tttttttgtagaaacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagtccttctgcctcagcttcccaaagtac i macFas5.chr6 I 3 C 0 s papAnu2.chr6 173163620 93 - 174439528 tttttttgtagagacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagtccttctgcctcagcttcccaaagtac i papAnu2.chr6 I 3 C 0 s chlSab2.chr4 89609915 93 - 91010382 ttttttgttagagacagggtctcacaatattgcccaggctggtcttgaactcctagacccaagcagtccttctgcctcagcttcccaaagtac i chlSab2.chr4 I 3 C 0 s calJac3.chr2 153844 92 - 204313951 -ttttttgcagagacagggtctcacaatgttgcccaggctgatctggaactcctagactgaaacagtccttctctctcagcttcccagagtgt i calJac3.chr2 C 0 C 0 e rheMac3.chr6 396 9651 + 180491593 I e mm10.chr13 46090399 814 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I a score=326733.000000 s hg38.chr3_KI270935v1_alt 44798 107 + 197351 tgggattacaggcatgagccactgcacccagccAGGTTACAAAGCCTTGATTTCTTACTGGAAATTTGCGTAGTGAGCATATAGAGGTAGTCTGGGTTTTTTCCCCT s panTro4.chr3_GL389630_random 9079 107 + 103936 tgggattacaggcatgagccactgcacccagccAGGTTACAAAGCCTTGATTTCTTACTGGAAATTTGCTTAGTGAGCATATAGAGGTAGTCTGGGTTTTTTCCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199691208 107 + 202140232 tgggattacaggcatgagccactgcacccagccAGGTTACAAAGCCTTGATTTGTTGCTGGAAATTTGTTTAGTGATCATATAGAGGTAGTCTGGGTTTTTTCCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789594 106 + 123690457 tgggattacaggcatgagccactgcacccagccAGGTTACAAAGCCTTGATTTGTTACTGGAAATTGGCTTAGTGATCATATAGAGGTAGTCTGGGTTTTTTCCCC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10047 107 + 180491593 tgggattacaggtgtgagccacggcacccagccAGGTTACAAAGCCTCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGGGTTTTTTCCCCT i rheMac3.chr6 I 9651 C 0 s macFas5.chr6 180275530 107 - 181584905 tgggattacagacatgagccacggcacccagccAGGTTACAAAGCCTCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGGGTTTTTTCCCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163713 107 - 174439528 tgggattacagacatgagccacggcacccagccaggTTACAAAGCCTCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGGGTTTTTTCCCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610008 107 - 91010382 tgggattacagacatgagccacggcacccagccAGGTTACAAAGCCTCGATTTGTTACTGGAAATTTGCTTAGTGGTCATATAGAGGTAGTCTGGGTTTTTTCCCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 153936 107 - 204313951 tgggattacaggcatgagcccccacccccagccAGGTTACAAAGCCTTGATTTCTTCCTGGAAATTTGCTTAGTGATCATATAGTGGTCGTCTGGGTTTTTTCCCCT i calJac3.chr2 C 0 C 0 e mm10.chr13 46090399 814 - 120421639 I e canFam3.chr34 30175745 188 - 42124431 I a score=458130.000000 s hg38.chr3_KI270935v1_alt 44905 149 + 197351 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTACATTTTTTTTTTTTAA--ATTATTTTGCAGTCATTATTTTCTGTTT s panTro4.chr3_GL389630_random 9186 149 + 103936 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTACATTTTTGTTTTTTTA--ATTATTTTGCAGTCATTATTTTCTGCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199691315 143 + 202140232 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGAGGTTAC---TTTTTTTTTAAA--ATTATTTTGCAGTC---ATTTTCTGCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789700 148 + 123690457 AGAAGTGATTAAACTGAGAAATCCAGAGATTATATGGTGGCCATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTAC-TTTTTTTTTTTTTA--ATTATTTTGCGGTCATTATTTTCTGCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10154 148 + 180491593 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTAC-atttttttttttta--attattttGTAGTCATTATGTTCTGCTT i rheMac3.chr6 C 0 I 317 s macFas5.chr6 180275637 148 - 181584905 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTAC-TTTTTTTTTTTTTA--ATTATTTTGTAGTCATTATGTTCTGCTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163820 147 - 174439528 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTtggggttac--tttttttttttaa--attattttgtagtcATTATGTTCTGCTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610115 147 - 91010382 AGAAGTGATTAAACTGAGAAATCCGGAGGTTATATGGTGGTAATGTTGAGACTAGATAGAGGCTGGTTGGGGATCTTAACAGTTAAGGTGACATTTTTGGGGTTAC--TTTTTTTTTTTAA--ATTATTTTGTAGTCATTATGTTCTGCTT i chlSab2.chr4 C 0 I 313 s calJac3.chr2 154043 146 - 204313951 AGAAGTGATGATACTGAGAAATCTAGAGATTGTCTGGTGGTAATGTTGACACCAGATAGAGGCTGGTTGGGGATCTTAACTATTAAGGTGACATTTTTGGGGTTAC---ATTTTTAAAAAA--ATTATTTTGCAGTCATTATGTTCTGCTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30175933 136 - 42124431 aaGAGAGAGAAAAGAAAGAGAT-------TTCTACAGTAATAGACTTGGGACTCGACACAGGCTAGGTGTGGGTCCTAACAGTTTATGTAG-------AGGGTAAC-CTAGTTTTGGTCAGGTATTGTTTTGCAGTTATTATGTTCTCCTT i canFam3.chr34 I 188 C 0 e mm10.chr13 46090399 814 - 120421639 I a score=52671.000000 s hg38.chr3_KI270935v1_alt 45054 15 + 197351 AGAAAAAGCACTATT s panTro4.chr3_GL389630_random 9335 15 + 103936 AGAAAAAGCACTATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199691458 15 + 202140232 CGAAAAAGCACTATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789848 15 + 123690457 AGAAAAAGCACTATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10619 15 + 180491593 agaaaaaGCACTATT i rheMac3.chr6 I 317 C 0 s macFas5.chr6 180275785 15 - 181584905 AGAAAACGCACTAAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163967 15 - 174439528 AGAAAAAGCACTATT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610575 15 - 91010382 agaaaaaGCACTATT i chlSab2.chr4 I 313 C 0 s calJac3.chr2 154189 15 - 204313951 AGAAAAAGCACTATT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30176069 15 - 42124431 AGAAAAGTCACTATG i canFam3.chr34 C 0 C 0 e mm10.chr13 46090399 814 - 120421639 I a score=328004.000000 s hg38.chr3_KI270935v1_alt 45069 89 + 197351 AGGAAGCTGTTATTTTTAGGGGAAGTTCATTACGTATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG s panTro4.chr3_GL389630_random 9350 88 + 103936 AGGAAGCTGTTATTTTTAGGGGAAGTTCATTATGTATTACTTGCC-GATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199691473 89 + 202140232 AGGAAGTTGTTATTTTTAGGGGAAGTTCGTTACCTATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789863 89 + 123690457 AGGAAGTTGTTATTTGTAGGGGAATTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATATTTAAAATAGTTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10634 89 + 180491593 AGGAAGTTGTTATTTTTAGGGGAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180275800 89 - 181584905 AGGAAGTTGTTATTTTTAGGGGAAGTTCATTAAATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173163982 89 - 174439528 AGGAAGTTGTTATTTTTAGGGGAAGTTCATTACATATTACTTGCCtgataaaaataacttatttgcaatgaaattttttaaatagttgt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610590 89 - 91010382 AGGAAGTTGTTATTTTTAGGGGAAGTTCATTACATATTACTTGCCTGATAAAAATCACTTATTTGCAATGAAATTTTTTAAATAGTTGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 154204 89 - 204313951 AGGAAATTGCTATTTTTAGGGGAAGTTCATTACATGTTACTTGCTTGATAAAAAGCACTTGTTTGCAATGAAATATTTTAAGTAGTTGG i calJac3.chr2 C 0 C 0 s mm10.chr13 46091213 81 - 120421639 aAGAAATTGGTATTTTGAGGGAAAGTTGATTACATATTATTTGTCTGTTATAAATTA--TGTTTGCAGTCCAATATT---AATAGT--- i mm10.chr13 I 814 C 0 s canFam3.chr34 30176084 84 - 42124431 -GGAA----TTGTTTTGAGGAGAAGTTTATCACACAGTGCTTGCTCAGTATAAATTATTTACTTGCTATGAAATATTTTAAAGAGTAGG i canFam3.chr34 C 0 I 147 a score=677252.000000 s hg38.chr3_KI270935v1_alt 45158 223 + 197351 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAAG-----TACAACTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAGGATT---------CCCACCCTCTACGGACAGATTCGATTTCACTTGCTGGTTTTCTTTTCAGGATAGCGTCAAATAATGTGCAGGAAAAGGA-ATACCGTGTG-TGGGAGTGTGAGTCTTATGTGCACG s panTro4.chr3_GL389630_random 9438 228 + 103936 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAAACAAACTGTAGCTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGGGAACAGGATT---------CCCACCCTCTACGGACAGATTCAATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGCGGGAAAAGAA-ATACCGTGTG-TGGGAGTGTGAGTCTTACGTGCACG i panTro4.chr3_GL389630_random C 0 I 217 s ponAbe2.chr3 199691562 228 + 202140232 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAAACAAAGTACAACTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAGGATT---------CCCACCCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGGTAGCGTCAAACAATGTGCAGGAAAAGAA-ATACCGTGTG-TGGGAGTGTGAGTCTTATGTGCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120789952 228 + 123690457 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCATTCTAAAAACAAAGTACAACTAACCTCTATTAGAGGAGAAGGGCTGACTTAGAGTGAACAGGATT---------CCCACCCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGACAGTGTCAAATAACGTGCAGGAAAAGAA-ATACCACGTG-TGGGAGTGTGAGTCTTACGTGCACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10723 224 + 180491593 TGTGAATGA-----------------------------------------ATATGTAACAT----GTACTTA--GAAAAATAATTTAGGCCATTCTAAAAACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTACAGTGAACAGAATT---------CCCACTCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAGAAGAA-ATACCATGTG-TGGGAGTGTGAGTCTCATGTGCACT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180275889 225 - 181584905 CATGAACAA-----------------------------------------ATACGTAACTT---GGTACTTA--GAAAAATAATTTAGGCCATTCTAAAAACAAAGTACAGCTAGCCTCTATTAGAGGAGAAAGGATGACTTAGAGTGAACAGGATT---------CTCACTCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCATGATAGCATCAAATAATGTGTAGGAGAAGAA-ATACCATGTG-TGGGAGTGTGAGTCTCATGTGCACT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173164071 225 - 174439528 cATGAACAA-----------------------------------------ATGTGTAACTT---Ggtactta--gaaaaataatttaggccATTCTAAAAACAAAGTACAGCTAGCCTCTATTAGAGGAGAAAGGATGACTTACAGTGAACAGAATT---------CCCACTCTCTACGGACAGATTGGATTTCACTTGCTGGTTTTCTTTTCGTGATAGCATCAAATAATGTGTAGGAGAAGAA-ATACCACGTG-TGGGAGTGTGAGTCTCATGTGCACT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610679 214 - 91010382 TGTGAATGA-----------------------------------------ATATGTAACAT----------G--GAAAAATAATTTAGGCCATTCTAAAAACAAAGTACAGCTAGCCTCTATTAGAGGAGAAGGGATGACTTACAGTGAACAGGATT---------CCCA--CTCTACGGAC--ATTGGGTTTCACTTGCTGGTTTTCTTTTCATGATAGCGTCAAATAATGTGTAGGAGAAGAA-ATACCGTGTG-TGGGAGTGTGAGTCTCATGTGCACT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 154293 224 - 204313951 CATGAATGA-----------------------------------------ATATGTAACTTCTTGGTACTTA--GAAAAATAATTTAGGCCCTTCTAAAAACAAAGTGCAACTAATCTC-ATTAGAAGAGAAGGGATGACTTAAAGCGAACCGGATT---------CTC---CCCTCCGGTGACAGTGGATTTCACTTGGTGGTTTTCTTTTCATGATAGCACAGAGTAGTGTGCAGGAGAAGAA-ATACCATGTG-CTGCAGTGTGGGTCTTACGTGCACT i calJac3.chr2 C 0 C 0 s mm10.chr13 46091294 201 - 120421639 -AAAAATGA-----------------------------------------ATCTGTAACTTCTTGGTAATTG--TAGAAAAATTTTAGACTGTTTTAAAAACAAGATTTAG--AATTCCATTTATAAAAGAA----TGACATAG------------T---------CCTACCCCACAGGGATAGAAAGAATTTCAGTTGA-GGTTTTCTT---ATGGTAGCTTAAAAC----TGTAAAAGAAAAATGTACCTTGTG-TTGGAGTGT-AGTTTTGTTTGTACA i mm10.chr13 C 0 I 3 s canFam3.chr34 30176315 270 - 42124431 catgaataaataaataaaatcttaaaaaaaaaAAAAAAGTAGGTGTGAATATATATAAGTTCTCAATATTTATGGAAAAGTAATTTAGG---TTCTTAAAA---AATATAAATAA--TCTGTTAAAGGAGAACATAATGCACACAAAACAGAGCATTGGGTCATAGCCCTCCCTTCCGTGATACAGTGGATTTCAGTCTGTGATTCTGTTCTTCTGGCAACTTAAAATAATTTGCTGAGGAAAAA-ACACTCTGTGCTGGAAGTGTGAATCCT-TCTGTA-- i canFam3.chr34 I 147 C 0 a score=1379623.000000 s hg38.chr3_KI270935v1_alt 45381 522 + 197351 AAGAACAGGACAGTTAGCATCGTTCCCA-CCTCCAGAGA-TCCTCACGGTGGTCATGCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGAGGCACTGGTGGATGTTTGCGTGGCAAGGATGGTGGGACCCCAGGCCCACGTTCTTCCCGTTAGCTTTCTCTGGTGTTAACTGTTTAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTTTGCTTTTT------GTATGGACTCAAGTGA---AATAAAAACTAGCACCGCCGTACC--TTATA--------------AACATG------ACCCTTTTCTATCTGTAGTTAGAAAGGTACAGGCAGT-ATTA--AAAGGGTAGC-TAC---TTCAGACACTGTGTCTCTGTGGATCTGACGACAGCTCAGGAGGCCAGCACATGCAGAGCCGGCG--TCTCATCCCCAGCCGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTGCCTCGCTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTCGCAGTGAGGTCTGATACCACTTCTCT s panTro4.chr3_GL389630_random 9883 522 + 103936 AAGAGCAGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATGCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGAGGCACTGGTGGATGTTTGCGTGGCAAGGATGGTGGGACCCCAGGCCCACGTTCTTCCCGTTACCTTTCTCTGGTGTTAACTGTTTAGCATCATTTCTGCTGTTTTTATAGAACAGGCGCTTTTTGCTTTTT------GTATGGACTCAAGTGA---AATAAAAACTAGCACTGCCGAACC--TTATA--------------AACATG-----CACCCTTTTATATCTGTAGTTAGAAAGGTACAGGTAGT-ATTA--AAAGGGTAGC-TAC---TTCAGACACTCTGTCTCTGTGGATCTGACGACAGCTCAGGAGGCCAGCACATGCAGAGCTGGCG--TCTCATCCCAAGCCGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTGCATCATTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTG-AGCAGTGAGGTCTGATACCACTTCTAT i panTro4.chr3_GL389630_random I 217 C 0 s ponAbe2.chr3 199691790 523 + 202140232 AAGAACAGGACAGTTAGCATCACTCCCA-CCTCCAGAGA-GCTTCACGGTGGTTATCCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGAGGCACTGGTGGATGTTTGTGTGGCAAGGATGGTGGGACCCCAGGCCCACGTTCTTCCCGTTACCTTTCTCTGGTGTTAACTGTTTAGCATCATTTCTGCCGTTTTTATAGAACAGGTGCTTTTTGCTTTTT------GTATGGACTCAAGTGA---AAGAAAAACTAGCACTGCTGTAAC--TTATA--------------AACATG-----CGCCCTTTTATATCTGTAGTTAGAAAGGTACAGATAGT-ATTA--AAAGGGTAGCTTAT---TTCAGACACTGTGTCTCTGTGGATCTGACCACAGCTCCGGAGGCCAGCACACGCAGAGCTGGTG--TCTTATCCCAAGCTGTTGCTGATCATCGGCGAAGGCGGAGTTCAGGTCCATCGTTCCTGACGCCACAGG-TGTGCTTGTCTCATTCCATAGCCCTGTACTTTGTAGCAGTGAGGACCGATACCACTTCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120790180 530 + 123690457 AAGAACAGGACAGTTAGCATCACTCCCA-CCTCCAGAGA-TGTTCACGGTGGTTATCCAGCCTCCTGTGCTCAGAA---CAGTATG--AGGTG---------GATGAGGCACTGGTGGATGTTTGTGTGGCAAGGATGGTGGGACCCCAGGCCCACGTTCTTCCCGTTACGTTTCTCTGGTGTTAACTGTTTAGCATGATTTCTGCTGTTTTTATAGAACAGGTGCTTTTTGCTCTGTTGAAAAGAGCAAATAAAAGTGA---AATAAAAACTAGCACTGCCATAAC--TTATA--------------AACATG-----CGCCCTTTTATATCTGTAGTTAGAAAGGTACAGATAGT-ACTA--AAAGGGTAGCTTAC---TTCAGACACTCTGTCTCTGTGGATCTGACCACAGCCCAGGAGGCCAGCACACGCAGAGCTGGCG--TCTTATCCCAAGCCATTGCTGATCATGGGTGGAGGCGGAGTTCAGGTCCGTCGTTCTTGACGCCACAGGTTGTGCTTGTCTCATTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 10947 515 + 180491593 AAGAACAGGACAATTAGCATCACTCTCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCATGTGCTCAGAA---CAGTGTG--AGGTG---------GATGAAACACCGGTGGATGTTTGTGTGGCAAGAATGGTGGGACCCCAGGCCCACATTCTTCCCGTTACCTTTCTCTGGTGTTAACTGTTTGGCATCATTTCTGCTGTTTTAATAGAACAGGTGCTTTTT-------------GTGTGGATTCAAGTGA---AATAAAAACTAGGACTGCTGTAAC--TTATA--------------AACATG-----CCCGCTTTTATATCTGTAGTTAGAAAGGTACGGAGAGT-ATTA--AAAAGGTAGCTTAC---TTCAGACACTCTGTCTC--TGGATCTGACCACAGCTCGGGAGGCCAGCACACGCAGAGCTGGCG--TCTTACCCCAAGTCACTGCTGACCATGGGCGAAGGCGGAGTTCAGGTCCATCGCTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180276114 514 - 181584905 AAGAACAGGACAATTAGCATCACTCTCA-CCTCCAGAGA-TCTTCACGGTAGTTATCCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGGGGCACCGGTGGATGTTTGTGTGGCAAGGATGGTGGGACCCCAGGCCCACATTCTTCCCGTTACCTTTCTCTCATGTTAACTGTTTGGCATCATTTCTGCTGTGTTTATAGAACAGGTGGTTTTT-------------GTATGGATTCAAGTGA---AATAAAAGCTAGGACTGCCGTAAC--TTATA--------------AACATG-----CCCCCTTTTATATCTGTAGTTAGAAA-ATACAGAGAGT-ACTA--AAAGGGTAGCTTAC---TTCAGCCACTCTGTCTC--TGGATCTGACCACAGCTCGGGAGGCCAGCACATGCAGAGCTGGAG--TCTTACCCCAAGTCGCTGCTGATCATGGACGAAGGCGGAGTTCAGGTCCATCGTTCCTGATGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGGGGACTGATACCACTTCTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173164296 517 - 174439528 AAGAACGGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGGGGCACCGGTGGATGTTTGTGTGGCAAGGATGGTGGGACCCCAGGCCCACATTCTTCCCGTTACCTTTCTCTGGTGTTAACTGTTTGGCATCCTTTCTGCTGTTTTAATAGAACAGGTGCTTTTT-------------GTGTGGattcaagtga---aataaaaactagGACTGCCGTAAC--TTATA--------------AACATG-----CCCCCTTTTATATCTGTAGTTAGAAAATGACAGAGAGT-ACTA--AAAGGGTAGCTTAC---TTCAGCCACTCTGTCTC--TGGATCTGACCACAGCTCGGGAGGGCAGCACACGCAGAGCTAGCGTCTCTTACCCCAAGTCGCTGCTGACCATGGGCGAAGGCGGAGTTCAGGTCCATCGCTCCTGACGCCACAGGTTGTGCTTGTCTCACTCCATAGCCCTGCACTTTGTAGCAGTGAGGACTGATACCACTTCTCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89610893 515 - 91010382 AAGAATGGGACAGTTAGCATCGCTCCCA-CCTCCAGAGA-TCTTCACGGTGGTTATCCAGCCTCGTGTGCTCAGAA---CAGTGTG--AGGTG---------GATGAAGCACCGGTGGATGTTTGTGTGGCAAGGATGGTGGGACCCCAGGCCCACATTCTTCCCGTTACCTTTCTCTGGTGTTAACTGTTTGGCATCATTTCTGCTGTGTTTATAGAACAGGTGGTTTTT-------------GTGTGGATTCAAGTGA---AATAAAAACTAGGACTGCCGTAAC--TTATA--------------AACATG-----CCCCCTTTTATATCTGTAGTTAGAAAATTACAGAGAGT-ACTA--AAAGGGTAGCTTAC---TTCAGCCACTCTGTCTC--TGGATCTGACCACAGCTCGGGAGGCCAGCACATGCAGAGCTGGAG--TCTTACCCCAAGTCGCTGCTGATCCTGGGCGAAGGCGGAGTTCAGGTCCATCGCTCCTGACGCCACAGGGTGTGCTTGTCTCACTCCACAGCCCTGCACTTTGTAGCAGTGAGGACTGACACCACTTCTCT i chlSab2.chr4 C 0 I 323 s calJac3.chr2 154517 421 - 204313951 AAAAACTGGACACTTAGCCTCGCTCCCA--CTTCAGAGA-TCTTCATGGTGGTCATCCAGCCTCGTTTCCTCAGAA---CACTGTG--AGGTG---------GAGGAGGCACTGG---------------------------------------------------------------------------------------------------TAGAACTGGTGCTGTTT-------------GTATGGATTCAAGCAA---AGTAAAAACGAGCACTGTCGTAAC--TTACA--------------AACATG---TGCCCCCTTTTGTATCTGTGGTTAAAAAGGTACAGGTAGT-ATTA--AAAGGGTAGCTTACA-TTTCACACACTCAGTCTCTGTGGATTTGACCacagctcaggaggctggcacgtgcagaggtggcg--tcttgtcccaggtcgttgctgatcattggcaaaggcagagttcaggtccatccttcctgacgccacaggtagtgtttgtctcactccatagccctgcacttTGCAGCAGTGAGGACTGATACCACTTCTCT i calJac3.chr2 C 0 C 0 s mm10.chr13 46091498 431 - 120421639 CAGAACCAGGAGGTTACTAGAGCGCCAG-CCTCTAAGGAGCCTTCATGGTAGCTGTTTTGTCT-GTTTTCTTAGAATAGCAGTATG--AAATAATACCTCATGAGGAGGCATAGA---------------------------GATCCCTCTCCCTGTTCCATCCATTTTTCTTTCCTC--TGTTACTTGT---GGATGTCAGTTGTAGTTGATATAGAGCGGGTGCGTTCT-------------GGATGAACAGTAGTGATGGTGCAGAGACCAGCACATCCTTGCC--TCAC-------------------TG--------------------GTAAAGAGAAAGGTTTGGGTAATCATT---------TTACATAT---TTTACATATCTTCACACTCCTAGTCATACCATAGCACA--AGTCTAA---ATGTGAAGACAGTT--CCTGGTCCTTAG----TGCTGTCCAGTTGCATAAGCAGGGCTCAAAGG-ATCTTCTCCGACACCAAATGTAGCCTTT-------------------------------GGGAGGGTCAAAAGCTCATCT-- i mm10.chr13 I 3 C 0 s canFam3.chr34 30176585 481 - 42124431 ---AATGGGACGCTTACTGTTGCTATGAGCTTCCAGAGGGTCTTCATGTGGGTTACGTTGGCCCATTCGTTCACGA---CGACATGTTAGGTG------------AAGACAC-------TGTTCCCCAAGGGAGGGTTGTGGGATCCCTGGGCCCCTCTCTTCCCGTTATGCTTCACTGGTGGTAACTGTTTAGTCTCAGTTGTTCTGTTTTTATCAAACAAAAGTTTTTT--------------TATGGATT----TTA----------ACTCTTACTGTCCTACTAGTTATATTAGCCCTCAGTATAACAAGCTGCACTCCCCTTTATATCTGCAGTTAG-------CAGATAAT-ATAACGAAATGGACAGTTATGTTTTCAAACACCTTCTCTC--TTGCTCTGACTGCAAGTCC--AGGCTA--AAAGGCAGAGGTAGGG--CCCTGTGCCCA-TTTTTGCTg--------caaaggcaggagtcaaaaccacctggtctgacccccaatctagtgcttgtctcac-----------------tgtaATGGTGAAGCCTGAAATAAAATCC-- i canFam3.chr34 C 0 C 0 a score=221365.000000 s hg38.chr3_KI270935v1_alt 45903 79 + 197351 CAGAGCAGTGTAGAAATTTTGAGCTTCTCTTTCTTTGAAAATGC-AGAAAAGAACATTTTGTGAGAATACCCTATACTTG- s panTro4.chr3_GL389630_random 10405 79 + 103936 CAGAGCAGTGTAGAAATTTTGAGCTTCTCTTTCTTTGAAAATGC-AGAAAAGAACATTTTGTGAGAATACCCTATACTTG- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692313 79 + 202140232 CAGAGCAATGTAGAAATTTTGAGCTTCTCTTTCTTTGAAAATGC-AGAAAAGAACATTTTGTAAGAATACCCTATACTTT- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120790710 77 + 123690457 CAGAGCAATGTAGAAATTTTGAGCTTCTCTTTCTTTGAAAATGC-AGAAAAGAACATTTTGTAAGAATACCCTATACT--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 11462 80 + 180491593 CAGAGCAATGTAGAAATTTTGAGCTTCTTTTTCTCTGAAAATGTAAAAAAAGAACATTTTGTAAGAATACCCAATACTTg- i rheMac3.chr6 C 0 I 1935 s macFas5.chr6 180276628 79 - 181584905 CAGAGCAATGTAGAAATTTTGAGCTTCTCTTTCTTTGAAAATGC-AAAAAAGAACATTTTGTAAGAATACCCTATACTTT- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173164813 80 - 174439528 CAGAGCAATGTAGAAATTTTGagcttctttttctctgaaaatgcaaaaaaagaacattttgtaaGAATACCCTATACTTT- i papAnu2.chr6 C 0 C 0 s calJac3.chr2 154938 79 - 204313951 CCCAGCAATATAGAAAGTTTGAGCTTCTCTTTCTTTGAAAATGC-AAAAAAGAACATTTTATAAGAATATCCCATACTTT- i calJac3.chr2 C 0 C 0 s mm10.chr13 46091929 73 - 120421639 -AGAGCAAAGTGGAGACTCAGA---TTCCCTGCTTTGAGAAT---GAGAAAAATTGTTTTAAAAGAATAGATTATACTTT- i mm10.chr13 C 0 C 0 s canFam3.chr34 30177066 80 - 42124431 CAGGGCAAAGCAGAAAATTCAAAGTTCCCTTTTTTTGGAAATGA-GAAAAAGCAAGTTTTATAAGAATATCTTATAATTTA i canFam3.chr34 C 0 C 0 e chlSab2.chr4 89611408 323 - 91010382 I a score=264275.000000 s hg38.chr3_KI270935v1_alt 45982 143 + 197351 ACATCTGAGAAACCG----------------------------------------------------CTC-----ACACATGCAGCA-----------TCTC---ACGCAG--------------A--ATGCTGTg-gagtcggactcaaaaggctgcacgcctgtggtcctgttgataggacattctggacaaggcaca-tctagggaagaaaagggattggtggttgcca s panTro4.chr3_GL389630_random 10484 143 + 103936 ACATCTGAGAAACCG----------------------------------------------------CTC-----ACACATGCAGCA-----------TCTC---ACGCAG--------------A--ATGCTGTg-gagtcggactcagaaggctgcacgcctgtgatcctgttgatacgacattctggaaaaggcaca-tctagggaagaaaagggattgctggttgcca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692392 143 + 202140232 ACGTCTGAGAAACTG----------------------------------------------------CTC-----ACACATGCAGCA-----------TCTC---ACGCAG--------------A--ATGCTGTg-gagtcagactcaaaaggctgcacacctgtggttctgttgataggacattctggaaaaggcaca-tctagggaagaaaagggattggtggttgcca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120790787 140 + 123690457 ---TCTGAGAAACTG----------------------------------------------------CTC-----ACACATGCAGCA-----------TCTC---ATGCAG--------------G--ATGCTGTg-gagtcagactcaaaaggctgcacacctgtggttctgttgatacgacattctggaaaaggcaca-tctagggaagaaaagggattggtggttgcca i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180276707 143 - 181584905 ACATCTGAGAAACCG----------------------------------------------------CTC-----ACACATGCAGCA-----------TCTC---ACGCAG--------------A--ATGCTGTg-gagtcagactcaaaagactgcacacctgtgactctcttgatacaacattctggaaaaggcaca-tctagggaagaaaagggattggtggttgcca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173164893 143 - 174439528 ACATCTGAGAAACCA----------------------------------------------------CTC-----ACGCATGCAGCA-----------TCTC---ACGCAG--------------A--ATGCTGTG-GAGTCAGACTCAAAAGGCTGCACACCTGTGGCTCTCTTGAtacgacattctggaaaaggcaca-tctagggaagaaaagggattggtggttgcca i papAnu2.chr6 C 0 C 0 s calJac3.chr2 155017 142 - 204313951 ACATCTGAAAAACCG----------------------------------------------------CTC-----ATGCATGCAGCA------------CTC---ACGCAG--------------A--ATGTTGTg-gagtcagactcaaaacgctgcacacctgaggctctgttgatacagcattctggaaaaggcaca-tccagggaagaagaggggtcaggggttgcca i calJac3.chr2 C 0 C 0 s mm10.chr13 46092002 148 - 120421639 ---TATAGGCAAAGG----------------------------------------------------TTCTACAAATACATTAAGAA-----------TTTTTAAATTCAGCAATGAAAGGACTAA--ATGTT-TA-GAGTAagactcaaaagactgcaca--tgtgttttta----------attctggaaattgcaagctgtaaggcagaaacaga--tcatggttgcta i mm10.chr13 C 0 C 0 s canFam3.chr34 30177146 207 - 42124431 ATATCTGAAAGATCAATGCATACTTTAAAAAATTTTTTTTTGactcaaaaataaaaggaacaaattcctt-----gttcgtgcaacagcacaaatggatctc---agacat--------------attaagttgtattaatcaggctcaaaaggtttcatatatctga--ctatttatataacattatggaagagacaaa-actgaggaataagctggctcagtggttgcca i canFam3.chr34 C 0 I 149 e rheMac3.chr6 11542 1935 + 180491593 I e chlSab2.chr4 89611408 323 - 91010382 I a score=125329.000000 s hg38.chr3_KI270935v1_alt 46125 110 + 197351 gaggctgTTTCCTGATTGTGCTGAGGCTTACAGACACAGCTCTGTGTGTGTCAAAGTTTGAAAAAC-CTACATTAAAAATGATG-------------AG----TTTATTTTACTGTATCT---TTACGCTT s panTro4.chr3_GL389630_random 10627 110 + 103936 gaggctgTTTCCTGATTGTGCTGAGACTTACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAAC-CTACATTAAAAATGATG-------------AG----TTTATTTTACTGTATCT---TTATGCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692535 112 + 202140232 gaggctgTTTCCTGATTGTGCTGAGACTTACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAACGCTACATTAAAAATGATG-------------AG---TTTTATTTTACTGTATCT---TTATGCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120790927 68 + 123690457 gaagctgTTTCCTGATTGTGCTGAGACTTAGAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAGC---------------------------------------------------------------TT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180276850 107 - 181584905 gaggctgTTTCCTGATTGTGCTAA----TACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAACCCTATACTAAAAATGATG-------------AG----tttattttactctatct---ttatgctt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173165036 107 - 174439528 gaggctgttTCCTGATTGTGCTAA----TACAGACACAGCTCTGTGTGTGTCAAAATTTGAAAAACCCTATACTAAAAATGGTG-------------AG----TTTATTTTACTCTATct---ttatgctt i papAnu2.chr6 C 0 C 0 s calJac3.chr2 155159 117 - 204313951 gaggctgTTTCCTGATTGTGCTCATAGTTA-ATACACAGCTCTGTGTGTGTCAGCATTTGAAAAATACTACACTAAAAATGGCG-------------AGTTTTTTTTTTTTACTGTATCTTAATTATGCTT i calJac3.chr2 C 0 C 0 s mm10.chr13 46092150 107 - 120421639 g--gctggg--ctagtgggggTTTTACTT--AAACATGACTC--TATTTGCCAAAACCTGAAAAGCTCTACTAAAAAAAAAATGTAAACAAAAAGACAA----CAAATTTCACTGTCTT------------ i mm10.chr13 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177353 149 - 42124431 I e chlSab2.chr4 89611408 323 - 91010382 I a score=142790.000000 s hg38.chr3_KI270935v1_alt 46235 59 + 197351 TAATTTTTAAAAATGAAAAGGAAAGAAAAAATGCTTGTAGCATCCCTACTTCTCCCCCA s panTro4.chr3_GL389630_random 10737 59 + 103936 TAATTTTTAAAAATGAAAAGGAAAGAAAAAATGCTTGTAGCATCCCTACTTCTCCCCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692647 53 + 202140232 TAATTTTTAAAAATGGAAAG------AAAAATGCTTGTAGCATCACTACTTCTCCCCCA i ponAbe2.chr3 C 0 I 30 s nomLeu3.chr11 120790995 59 + 123690457 TAATTTTTAAAAATGAAAAGGAAAGAAAAAATGCTTGTAGCATCCCTACTTCTCCCCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180276957 59 - 181584905 taatttttaAAAATGGAAAGGAAAGAAAAAATGCTTGTAGCATCACTACTTCTCCCCCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173165143 59 - 174439528 taatttttaaaaatggaaaggaaagaaaaaatgcttgTAGCATCACTACTTCTCCTCCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89611731 59 - 91010382 TAATTTTTAAAAATGGAAAGGAAAGAAAAAATGCTTGTAGCATCACTACTTCTcccccc i chlSab2.chr4 I 323 C 0 s calJac3.chr2 155276 59 - 204313951 TAATTTTTAAAAATGGAAAAGAAAGAAAAAGGGTTTGTAGCATCACTACTTCTCCCCCA i calJac3.chr2 C 0 C 0 s mm10.chr13 46092257 40 - 120421639 TGA-ATTTAAAAATGAAAAG------------ATTTGTAA------TATTTTTCCCCCA i mm10.chr13 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177353 149 - 42124431 I a score=273.000000 s hg38.chr3_KI270935v1_alt 46294 1 + 197351 A s panTro4.chr3_GL389630_random 10796 1 + 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s mm10.chr13 46092297 1 - 120421639 A i mm10.chr13 C 0 I 539 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177353 149 - 42124431 I e calJac3.chr2 155335 0 - 204313951 C e chlSab2.chr4 89611790 0 - 91010382 C e macFas5.chr6 180277016 0 - 181584905 C e papAnu2.chr6 173165202 0 - 174439528 C e ponAbe2.chr3 199692700 30 + 202140232 I e nomLeu3.chr11 120791054 0 + 123690457 C a score=4422.000000 s hg38.chr3_KI270935v1_alt 46295 18 + 197351 CCCCCGACCCCCCCA--AAA----- s panTro4.chr3_GL389630_random 10797 20 + 103936 CCCCCGCCCCCCCCAGAAAA----- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120791054 16 + 123690457 --CGCCCCCCCCCCA--AAA----- i nomLeu3.chr11 C 0 I 37 s macFas5.chr6 180277016 14 - 181584905 CCCCCC----CCCAA--AAA----- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173165202 10 - 174439528 CCCCCC--------A--AAA----- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89611790 18 - 91010382 ccccccacccccccA--AAA----- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155335 17 - 204313951 ------CTCCCTTCA--AAAAACAA i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I e ponAbe2.chr3 199692700 30 + 202140232 I a score=2548.000000 s hg38.chr3_KI270935v1_alt 46313 1 + 197351 A s panTro4.chr3_GL389630_random 10817 1 + 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692730 1 + 202140232 a i ponAbe2.chr3 I 30 C 0 s nomLeu3.chr11 120791107 1 + 123690457 a i nomLeu3.chr11 I 37 C 0 s macFas5.chr6 180277030 1 - 181584905 A i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173165212 1 - 174439528 A i papAnu2.chr6 C 0 M 787 s chlSab2.chr4 89611808 1 - 91010382 A i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155352 1 - 204313951 A i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I a score=336308.000000 s hg38.chr3_KI270935v1_alt 46314 205 + 197351 TATATATATGTGTAtttttagacatagtctccctctgtcacccaggcttgagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaaaatgtattctagggacagggtctccctgtgttgcccagggtggtcttgaactcctgacctcaagtgatcctcctgtctcagcctcccaaagt-----ggttacatgcat s panTro4.chr3_GL389630_random 10818 204 + 103936 AAAATATATATGTAtttttagacatagtcttcctctgtcacccaggcttgagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaaaatgtattctagg-acagggtctccctgtgttgcccaggatggtcttgaactcctgacctcaagtgatcctcctgtctcagcctcccaaagt-----gGTTACATGCAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692731 205 + 202140232 tatatatatCTGTATTTTTAGACATAGTctgcctctgtcgcccgggctggagtgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaaattgttttctagggacacggtctccctgtgttgcccaggttggtcttgaactcctgacttcaagtgatcctcctgtctcagcctcccaaagt-----gGTTACATGCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120791108 205 + 123690457 tatatatatgtatatttttagacatagtctccctctgtcgcccaggctggagcgcagtggtacgatcaggtgcacgccaccacatctggctaatttttaaaaatgttttctagggacagggtctccctgtgtttcccaggatggtcttgaactcctgacctcaagtgatcctcctgtctcagcctcccaaagt-----gGTTACATGCAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277031 197 - 181584905 --------TACATAtttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacggtcaggtgcacgccaccacacatggctaatttttaaaaatgtttcatagggacagggtctccctgtgttgcctaggatggttttgaactcctggcgtcaagtgatcctcctgtctcagcctcccaaagt-----gGTTATATGCAT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89611809 199 - 91010382 ------AATACATAtttttagagatagtctccctctgtcgcccaggctggagtgcagtggtacgatcaggtgcacgccaccacacatggctaatttttaaaaatattttgtagggacagagtctccctgtgttgcccaagatggtcttgaactcctggcctcaagtgatcctcctgtctcagcctcccaaagt-----gGTTACATGCAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155353 210 - 204313951 TACATAGATATGTGTTTTTAGAGATAGTCTCCCTCTGTCGCCCAGGCTGGAGTGCAGTGGTATGATcaggtgcacgccaccacacctggctaatttttaaacattttttgtagggacagggtctccctgtgttaccccggatggtcttgaactcttggcctcaggtgatgcacctgcatcagcttcccagagtgctgggattacatgtat i calJac3.chr2 C 0 I 375 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I e papAnu2.chr6 173165213 787 - 174439528 M a score=346489.000000 s hg38.chr3_KI270935v1_alt 46519 265 + 197351 CTATCCATGTGTTAAAATCGGTAGAACTGAggccgggtgcagtggctcacacctataatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgagaccagcttgggcaaggtggtgaaaccccgtctctaccagaaatacaaaaattagctgggcatggtggctcacacttgggtagtcccagctacttgggaggctgaggtgggaggattgttggagcctagaaggcggaggttgctgtgagccga s panTro4.chr3_GL389630_random 11022 265 + 103936 CTATCCATGTGTTAAAATCGGTAGAACTGAggctgggtgcagtggctcacacctataatcccaccactttgggaggccaaggcaggccgattgcttgagctcaggagttcgagaccagcttgggcaaggtggtgaaaccccgtctctaccaaaaatacaaaaattagctgggcatggtggctcacacttgggtagtcccagctacttgggaggctgaggtgggaggattgctggagcctagaaggcggaggttgcagtgagccga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199692936 265 + 202140232 CTATACGTGTGTTAAAATTGGTAGAACTGAggctgggtgcagtggctcacgcctataatcccaccactttgggaggccgaggcaagcagattgcttaagctcaggagttcgagaccagcttgggcaaggtggtgaaaccccgtctctaccaaaaatacaaaaagcagctgggcatggtggctcacagttgggtagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagccga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120791313 265 + 123690457 CTATACATGCATTGAAATTGGTAGAACTGAggctgggtgcagtggctcgcgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctgaggagttcaagaccagcttgggcaaggtggtgaaaccccgtctctaccaaaaatacaaaaattagctgggtatggtggctcacacttgggtagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagccga i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277228 265 - 181584905 CTATACATGTGTTAAAGTTGGTAGAACTGAggctgggcgcagtggctcatgcctataatcccaccactttgggaggccgaggcaggcagattgcttgagctcaggagttcaagaccagcttgggcaaggtggtaaaaccccgtctctgcaaaaaatacaaaaattagctgggcatggtggctcacaccagtgtagtcccagctacttgggaggctgaggtgggaggattgctggagccttgaaggcggaggttgcagtgagccga i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89612008 265 - 91010382 TTATACATGTGTTAAAGTTGGTAGAACTGAggctgggtgcagtggctcatgcctataatcccaccactttgggaggctgaggcaggcagattgcttgagctcaggagttcaagaccagcttgggcaaggtggtaaagccccgtctctgcaaaaaatacaaaaattagctgggcatggtggctcacaccagtgtagtcccagctacttgggaggctgaggtgggaggattgctggagcctggaaggcggaggttgcagtgagctga i chlSab2.chr4 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I e calJac3.chr2 155563 375 - 204313951 I e papAnu2.chr6 173165213 787 - 174439528 M a score=175255.000000 s hg38.chr3_KI270935v1_alt 46784 118 + 197351 gatcacaccactgcactccagcctgggcaacagagggaggagacactgtctcaaaaaaaaaaaa--gaaaaaagaaaCTGTAGAACTGTCCACCGAAAGAAAAAAGTCAATTTTAATGGA s panTro4.chr3_GL389630_random 11287 120 + 103936 ggtcacaccactgcactccagcctgggcaacagagggaggagacactgtctcaaaaaaaaaaaaaagaaaaaagaaaCTGTAGAACTGTCCATCGAAAGAAAAAAGTCAATTTTAATGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693201 114 + 202140232 gatcacaccactgcactccagcctggaaaacagaggtaggagacactctctcaaaaaaaa------gaaaaaataaaTTGTAGAACTGCCCACCAAAAGAAAAAAGTCAATTCTACTGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120791578 119 + 123690457 gatcacaccactccactccagcctgggcaacagagggaagagacattgtctcaaaaaaaagaaaa-gaaaaaataaaTTGTAGAACTGTCCACCAGAAGAAAAAAGTCAATTTTAATGAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277493 115 - 181584905 gatcataccactgcactccagcctgagcaacagagggaggagacgctgtctcaaaataaaa-----gaaaaaagaaaTTGTAGAGCGGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89612273 114 - 91010382 gatcacaccgctgca-tccagcctgagcaacagagggaggagacactgtctcaaaaaaaaa-----gaaaaaagaaaTTGTAGAACTGTCCACTGAAAGAAAAAAGTCAATTTTACTGAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158006 114 + 204313951 gatcacaccattgcactccaggctgggtgacaggtagaggagacactatctcaaaaaaat------aaacaaagaaaTTATAGAACTGTGCACCAAAAGAAAAAAGTCAATTTTACTGAA i calJac3.chr2 n 375 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177353 149 - 42124431 I e papAnu2.chr6 173165213 787 - 174439528 M a score=60650.000000 s hg38.chr3_KI270935v1_alt 46902 33 + 197351 TGATCAATTTT-TAAAGCGTTATAAACAAAAGGA s panTro4.chr3_GL389630_random 11407 33 + 103936 TGATCCGTTTT-TAAAGCGTTATAAACAAAAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693315 33 + 202140232 AGATCAATTGT-TAAAGCATTATAAACAAAAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120791697 33 + 123690457 TGATCCATTTT-TAAAGCATTATAAACAAAAGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277608 33 - 181584905 TGATCAATTTT-TAAAGCATTATAATCAAAAGGA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89612387 33 - 91010382 TGATCAATTTT-TAAAGCGTTATAATCAAAAGGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158120 31 + 204313951 TGATCAATTTT-TAAAGCA--ATAAACAAAAGGA i calJac3.chr2 C 0 C 0 s canFam3.chr34 30177502 34 - 42124431 TAATCACTTTTCTAATACATTACAAACAAAAGCA i canFam3.chr34 I 149 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e papAnu2.chr6 173165213 787 - 174439528 M a score=122223.000000 s hg38.chr3_KI270935v1_alt 46935 64 + 197351 AAAGAGACACCAGCAAGCCTAGAAGCATTTGAGCAGACC-GTCAAGAGACCCACAGCCTGGTCCC s panTro4.chr3_GL389630_random 11440 64 + 103936 AAAGAGACACCAGCAAGCCTGGAAGTAGTTGAGCAGATC-CTCAAGAGACCCACAGCCAGGTTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693348 64 + 202140232 AGAGAAACACCAGCAAGCCTAGAAGCATTTGAGCAGACC-CTCAAGAGACCCACAGCCTGGTCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120791730 64 + 123690457 AAAGAAACACCAGCGAGCCTAGAAACATTTGAGCAGACC-CTCAAGAGACCCACAGCCTGGGCCC i nomLeu3.chr11 C 0 I 226 s macFas5.chr6 180277641 64 - 181584905 AAAGAAACACCAGCAATCCTAGAAGCATTTGAGCAGGCC-CTCAAGAGACCCACACCCTGGTCCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166001 62 - 174439528 AAAGAAATAGCAGCAATCCTAGAAGCA-TTGAGCAGGCC-CTCAAGAGACCCACA-CCTGGTCCC i papAnu2.chr6 M 787 C 0 s chlSab2.chr4 89612420 60 - 91010382 AAAGAAACACCAGCAATCCTAGAAGCATTTGA----GCC-CTCAAGAGCCTCACACCCTGGTCCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158151 62 + 204313951 AAAGAAACAGAAGCAAGCCTAGAAGCATGTGAGCAGACC-CTCAGGAGGCCCCTCGC--GGTCCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30177536 65 - 42124431 GAAGAAACCACAGCTGGCCTGGAAGAGCTGGGGTGGTTTGCATGATAGACCAGTGCCCTCACTCC i canFam3.chr34 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I a score=262747.000000 s hg38.chr3_KI270935v1_alt 46999 142 + 197351 --GAGGAGAGGCGGTAGGCGGGACAGGGCCTGTTTGACTCCTGCA---------TTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAGAAAAAATACAT-----ATAATTTTATA---AAAAAAAAAAAC-----CTTTAAAACTTTTTTCAAGACATCT s panTro4.chr3_GL389630_random 11504 141 + 103936 --GTGGAGAGGCGGTAGGCAGGGCAGGGCCTGTTTGACTCCTGCA---------TTTCATACCTCCTATCTCCTGCATGTGTTACCTATTGAAGaaaaaatatat-----ataattttata---aaaaaaaaaaac------tttaaaaCTTTTTTCGAGATATCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693412 143 + 202140232 --GTGGAGAGGCAGTGGGTGGGGTGAGGCCTGTTTGACTCCTGCA---------TTTCATGCCTCCTGTCTCCTGCATGTGTTACCTGTTGAAGaaaatatatat-----aaaatgttatatatataaaaaaaaac------tttaaaaCCTTTTT-AAGACATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120792020 138 + 123690457 --GGGGAGAGGCAGTGGGCGGGGCAGGGCCTGTTTGATTCCTGCA---------TTTCATACCTCCTACCTCCTGCATGTGTTACCTATTGAAGAAAATATATAT-----ATAATGTTATA------AAAAAAAAC------TTTACAATTTTTTTCAAGACATCT i nomLeu3.chr11 I 226 C 0 s macFas5.chr6 180277705 135 - 181584905 --CTGGAGAGGCGGTGGGTGGGGCGGGGTTTGTTTGACTCCTGCA---------TTTCATACCTCCTACCTTCTGCATGTATTATCTGTTGAAGAAA--ATATAT-----ATAATGTTATT-------AAAAAAAC------TTTAAAACTTTTTTCAAGACATCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166063 131 - 174439528 --T--GGGGAGCGGTGGGCGGGGC-GGGCCTGTTTGACT-CTGCA---------TTTCATACCTCCTACCTTCTGCATGTATTACCtgttgaagaaa--atatat-----ataatgttata-------aaaagaac------tttaaaacttttttgaagACATCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612480 135 - 91010382 --CTGGGGAGGTGGTGGGTGGGGCGGGGCCTGTGTGACTCCTGCA---------TTTCATACCTCCTACCTTCTGCATGTGTTACCTGTTGAAGAAA--ATATAT-----ATAATGTTATA-------AAAAGAAC------TTTAAAACTTTTTTCAAGACATCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158213 132 + 204313951 --TTGGAGAGGCAGTGGGCAG--CATGACCTGTGTGTCCCCTGCA---------TTTCATACCTCCTACCTCCTGCATGTACTAACTATTGAAGAAA--ATATGC-----ATAAAGTTATA-------CAAAAAAC-------TTAAAACTTTTTTCAAGACATCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30177601 149 - 42124431 TTGTAGAGAGCTACTGTGAGCAAC----CCTACTTTGC--CTGCAAATCCTTGTTTCCTCATTTCATACCTTGTGCCCATATTACCTATGGAAGAAA--ATTCATTTCAAACCATGTCATT-------AAAAAAACAACATCTTTAAAA--GTTTTCAAAACATTT i canFam3.chr34 C 0 I 230 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I a score=201839.000000 s hg38.chr3_KI270935v1_alt 47141 90 + 197351 TGGAAACACAAGAGTTGCAAATCTTggccgtgcgcagcagctcacacatgtgatcccagcactttgggaggctgaggcaggtggctcacc s panTro4.chr3_GL389630_random 11645 90 + 103936 TGGAAACACAAGAGTTGCAAATCTTggccatgcgcagcagctcacacatgtgatcccagcactttgggaggctgaggcaggtggctcacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693555 90 + 202140232 TGGAAACATAAGAGTTGCAAATCTTggccgtgcgcggtggctgacacatgtgatcccagcactttgggaggccgaggcaggtggctcacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120792158 90 + 123690457 TGGAAACACAAGAGTTGCAAATCTTggccgtgcgtggtggctcacacatgtgatcccagcactttgtgaggccgaggcaggtggctcacc i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277840 90 - 181584905 TAGAAACACAAGAGTTGCAAATCTCggctgtgcacagtggctcacacttgtgatcccagcactttggaaggccgaggcaggtggatcacc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166194 90 - 174439528 TAGAAACACAAGAGTTGCAAATCtcggctgtgcacagtggctcacacttgtgatcccagcactttggaaggccgaggcaggtggctcacc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612615 90 - 91010382 TGGAAACACAAGAGTTGCAAATCTCggctgtgcgcagtggctcacacttgtgatcccagcactttgggaggccgaggcaggtggctcacc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158345 90 + 204313951 TAGAAACACAAGAGTTGCACATCTTGCccaagtgcagtggcttatacatgtaatcccagcactctgggaagctgatgcaggtgcatcacc i calJac3.chr2 C 0 n 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I a score=180763.000000 s hg38.chr3_KI270935v1_alt 47231 79 + 197351 tgaggtcaggagttcgagaccagcctggccaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta s panTro4.chr3_GL389630_random 11735 79 + 103936 tgaggtcaggagttcgagaccagcctggccaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199693645 81 + 202140232 tgaggtcaggagttcgagaccagccctgtccacattgttgaaaccccatctctactgaaaaatacaaacattacccaggTA i ponAbe2.chr3 C 0 M 336 s nomLeu3.chr11 120792248 79 + 123690457 tgaggtcaggagttcgagaccagcctggccaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180277930 79 - 181584905 tgaggtcaggagtttgagaccagcctggtcaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166284 79 - 174439528 tgaggtcaggagtttgagaccagcctggccaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612705 79 - 91010382 tgaggtcacgagtttgagaccagcctggtcaaca-tggtgaaaccccatctctactg-aaaatacaaaaattagccaggta i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155938 79 - 204313951 tgtgatcaggagtttgagaccagcctggccaaca-tggggaagccccatctctacta-aaaacagaaaaattagccagaca i calJac3.chr2 I 375 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I a score=110099.000000 s hg38.chr3_KI270935v1_alt 47310 67 + 197351 tggttgcaaactcctgtagtcccatctactccagagtctgaggcaggaggattgcttgaaccaggag s panTro4.chr3_GL389630_random 11814 67 + 103936 tggttgcatactcctgtagtcccatctactccagagtctgaggcaggaggattgcttgaaccaggag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120792327 67 + 123690457 tggtggcgtactcctgtagtcccagctactccggagtctgaggcaggaggattgcctgaaccaggag i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180278009 67 - 181584905 tggtggcatactcctgtagtcccagctactccggagactgaggcagaaggattgcttgaaccaggag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166363 67 - 174439528 tggtggcatactcctgtagtcccagctactccggagactgaggcaggaggattgcttgaaccaggag i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612784 67 - 91010382 tggtggcacactcctctagtcccagctactccagaggctgaggcataaggattgcttgaaccaggag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156017 67 - 204313951 tggtgaaacactctagtagtcccagctacttgggaggctgaggcaggaggatcacttgaactaggag i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I e ponAbe2.chr3 199693726 336 + 202140232 M a score=147646.000000 s hg38.chr3_KI270935v1_alt 47377 63 + 197351 gtggaggttgcagtgagccgagatggtgccactgcactccagcctgggctacagagcaaaatt s panTro4.chr3_GL389630_random 11881 63 + 103936 gtggaggttgcagtgagccgagatggtgccaccgcactccagcctgggctacagagcaaaatt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694064 63 + 202140232 gtggaggttacagtgagctgagatggtgccactgcactccagcctggactacagagcaaaatt i ponAbe2.chr3 M 336 C 0 s nomLeu3.chr11 120792394 63 + 123690457 gtggaggttgcagtgagccaagatggtgtcactgcactccagcctgggctacagagcaaaatt i nomLeu3.chr11 C 0 M 529 s macFas5.chr6 180278076 63 - 181584905 gtggaggttgcagtgagccgagatggtgccagtgcactccaacctgggctacagagcaaaatt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166430 63 - 174439528 gtggaggttgcagtgagccgagatggtgccaatgcactccagcctgggctacagagcaaaatt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612851 63 - 91010382 gtggaggttgcagtgagtcgagatggtgccagtgcactctagcctgagctacagagcaaaatt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156084 61 - 204313951 gtggaggttgcagggagccgagatggtgccgctgcactccagactgggctacaaag--aaatt i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I a score=28925.000000 s hg38.chr3_KI270935v1_alt 47440 31 + 197351 ccatctcaaaaaaaaaaaaa---aaaaaTTGCAA s panTro4.chr3_GL389630_random 11944 26 + 103936 ccatctcaaaaaaaaaaaaa--------TTGCAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694127 34 + 202140232 ccatcttaaaaaaaaaaaaaaaaaaaaaaTTCAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180278139 23 - 181584905 ccatctc---aaaaaaaaaa--------TTGCAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166493 23 - 174439528 ccatctc---aaaaaaaaaa--------ttgcaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89612914 25 - 91010382 ccatctc-aaaaaaaaaaaa--------TTGCAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156145 24 - 204313951 ccatctc--aaaaaaaaaaG--------TTGCAA i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46092298 539 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=257710.000000 s hg38.chr3_KI270935v1_alt 47471 151 + 197351 ATCTTGAAGTATAGGTGAGAG--CACACAACAGTCCAAATCAGCAGGTGACTTGCAAGCACACA----GCAGCCACCTTCCTCCCCCTAATGTGAAGGACA-GTGGGGCGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG--TC-ATTTTTTCCCGTTA s panTro4.chr3_GL389630_random 11970 151 + 103936 ATCTTGAAGTATAGGTGAGAG--CACACAACAGTCCAAATCAGCAGGTGGCTTTCAAGCACACA----GCAGCCACCTTCCTCCCCCTAATGCGAAGGACA-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG--TC-TTTTTTTCTCCTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694161 149 + 202140232 ATCTTGAACGTTAGGTGAGAG--CACATAAGAGTCCAAATCAGCA-GTGACTTTCAAGCACACA----GCAGCCACCTTCCTCCCCCTGATGCAAAGGACA-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTG--TC--TTTTTTCCCCTTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180278162 154 - 181584905 ATCTTGAAGTGTAGGTGAGAG--CACACAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAACCACCTTCCTCCCCCTTATGCGAAGGACG-GTGGGGTGGCCGGCCC--CTTGGGACCACCATCTGGAAGGTGGTTTTTTTTTTTCCCCTTA i macFas5.chr6 C 0 I 26 s papAnu2.chr6 173166516 152 - 174439528 atcttGAAGTGTAGGTGAGAG--CACACAAGAGTCCAAATCAGCAGGTGACTTTCAAGCACACA----GCAGCCACCTTCCTCCTCTTTATGTGAAGGACG-GTGGGGTGGCCGGCCC--CTCAGGACCACCATCTAGAAGgtg--tcctttttttcccctta i papAnu2.chr6 C 0 I 20 s chlSab2.chr4 89612939 152 - 91010382 ATCTTGAATTGTAGGTGAGAG--CACACAAGAGTCCAAATCAGCAGGTGACTTTCAGGCACACA----GCAGCCACCTTCCTTCCCCTGATGCGAAGGACG-GTGGGGTGGCCAGCGC--CTTGGGACCACCATCTGGAAGGTG--TCCTTTTTTTCCCCTTA i chlSab2.chr4 C 0 I 20 s calJac3.chr2 156169 149 - 204313951 ATCTTGAAGTCTAGGTGAGAGCACACACAAGAATTTGAATCAGCAAGTGACTTTCAAGCACACA----GCGGCCACCTTCCT-CCCCTGATGCAAAGGATG-GTGGGGTGGCCAGCCC--CTCGGGATTACCATCTGG-AGGTG--TC---TTTTTTCCCTTA i calJac3.chr2 C 0 C 0 s mm10.chr13 46092837 153 - 120421639 ATCTTGAGGTTT-TGTAAGAG--CACTTAAGAGTCAAGACCAGCAGGCAGCTTTTCAAGACACATAGGATAGCTACCTGTTTATTCCTTCATCAGAAAACGTGTGAGGCTAACATCTCAAATTGAGACCACTATCTTAAGGGTA--ACAATTT-----CCTTA i mm10.chr13 I 539 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177750 230 - 42124431 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=-1125.000000 s hg38.chr3_KI270935v1_alt 47622 8 + 197351 GTGGAGTG s panTro4.chr3_GL389630_random 12121 8 + 103936 GTGGAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694310 8 + 202140232 GTGGAGTG i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 173166688 6 - 174439528 atacac-- i papAnu2.chr6 I 20 C 0 s chlSab2.chr4 89613111 6 - 91010382 ATACAC-- i chlSab2.chr4 I 20 C 0 s calJac3.chr2 156318 7 - 204313951 GTGGAGT- i calJac3.chr2 C 0 C 0 s mm10.chr13 46092990 8 - 120421639 CTGGAGTA i mm10.chr13 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177750 230 - 42124431 I e macFas5.chr6 180278316 26 - 181584905 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=5922.000000 s hg38.chr3_KI270935v1_alt 47630 3 + 197351 ACA s panTro4.chr3_GL389630_random 12129 3 + 103936 ACA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694318 3 + 202140232 ACA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180278342 3 - 181584905 ACA i macFas5.chr6 I 26 C 0 s papAnu2.chr6 173166694 3 - 174439528 aca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613117 3 - 91010382 ACA i chlSab2.chr4 C 0 C 0 s mm10.chr13 46092998 3 - 120421639 ACA i mm10.chr13 C 0 I 22 e rheMac3.chr6 11542 1935 + 180491593 I e canFam3.chr34 30177750 230 - 42124431 I e calJac3.chr2 156325 0 - 204313951 C e nomLeu3.chr11 120792457 529 + 123690457 M a score=95264.000000 s hg38.chr3_KI270935v1_alt 47633 82 + 197351 TTTATATACACTTAATGTATATAAATCTGTATACATTTA---Attttttttttttgtaagacagggtctcgctctgttgcccagg s panTro4.chr3_GL389630_random 12132 80 + 103936 TTTGTATACACTTAATGTATATAAATTTGTATACATTTA---Atttttttttt--gtaagacagggtctcactctgttgcccagg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694321 85 + 202140232 TTTATATACACTTAATGTATATAAATTTGTATACATTTAtttatttattttttttgtaagacagggtctcgctctgttgcccagg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 180278345 74 - 181584905 TTTATATACACTTAATATGTATAAATTTGTATACttt-----ttttttttttttttaaagacagcgtctcactccg------agg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173166697 75 - 174439528 tttatatacacttaatatgtataaatttgtatac----------ttttttttttttaaagacaaggtctcactctgttgtgcagg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613120 76 - 91010382 TTTATATACACTTAATATGTATAAATTTGTATAC---------tttttttttttttaaagacagggtctcactctgttgtgcagg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156325 65 - 204313951 ------------------ATATAAATTTGTATACATTTAA--ttttttttttttttaaagacagagtctcactctgttgcccagg i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46093001 22 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I e nomLeu3.chr11 120792457 529 + 123690457 M a score=156995.000000 s hg38.chr3_KI270935v1_alt 47715 70 + 197351 ctggagtgcagtggcgcgatctcggctcactgcaacctccacctttcgggttaaagcagttctcatgcca s panTro4.chr3_GL389630_random 12212 70 + 103936 ctggagtgccgtggcacgatctcggctcaccgcaacctccacctttcgggttgaagcagttctcatgcca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694406 70 + 202140232 ctggagtgcagtggcgtgatctcggctcactgcaacctccgcctttcaggttcaagcagttctcatgcca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120792986 70 + 123690457 ctggagtgcagtggcacgatctcggctcactgcatcctccccctttcaggtttaagcagttctcatgATA i nomLeu3.chr11 M 529 C 0 s macFas5.chr6 180278419 70 - 181584905 ctggagtgcagtggcgcgatctcagctcactgcaaccttcacctttcaggttcaagcagttctcgtgcct i macFas5.chr6 C 0 I 46 s papAnu2.chr6 173166772 70 - 174439528 ctggagtgcagtggcgcgatctcagctcactgcaaccttcacctttcaggttcaagcagttctcgtgcct i papAnu2.chr6 C 0 I 46 s chlSab2.chr4 89613196 70 - 91010382 ctggagcgcaatggcgcgatctcagctcactgcaaccttcacctttcaggttcaagcagttctcgtgcct i chlSab2.chr4 C 0 I 46 s calJac3.chr2 156390 70 - 204313951 ctggagtgcagtggtgtagtctcagctcactgcaacctccaccttccgggttcaagcagttctcatgcct i calJac3.chr2 C 0 C 0 e rheMac3.chr6 11542 1935 + 180491593 I e mm10.chr13 46093001 22 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I a score=378897.000000 s hg38.chr3_KI270935v1_alt 47785 143 + 197351 ----------------------------------------------gataatttttgtgtttttagtagaaatgaggttttgccacgttggccaggctgctcttgaa--------ctcctgacctcaagtgcttcacctac---ctcagcctcctaaagtgctgggattacaggcgtgagccactgcacctggccTACAT s panTro4.chr3_GL389630_random 12282 143 + 103936 ----------------------------------------------gataatttttgtgtttttagtagaaatgaggttttgccacgttggccaggctgctcttgaa--------ctcctgacctcaagtgcttcacctac---ctcagcctcctaaagtgctgggattacaggcgtgagccaccgcacccggccTACAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694476 143 + 202140232 ----------------------------------------------gataatttttgtatttttagtagaaatgagggtttgccacattggccaggctgctcttgag--------ctgctgacctcaagtgatccacctac---ctcggcctcctaaagtgctgggattacaggcgtgagccaccgcacccggccTACAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793056 142 + 123690457 ----------------------------------------------ATtaatttttgtgtttttagtagaaatgaggttttaccacgttggccaggctgctcttgaa--------ctcctgacctcgagtgctccacctac---ctcagcctcctacagtgctgggatcacaggcgtgagccaccgcccccggccTACA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 13477 142 + 180491593 ----------------------------------------------gataatttttgtgtttttagtagaaacgaggttttgccacgttggccaggctgcacttgaa--------ctcctgacctcaagtgatccacctat---ctcggcctcctaaagtgctgggattacaggcgagagctaccgcacctggccTTCA- i rheMac3.chr6 I 1935 C 0 s macFas5.chr6 180278535 142 - 181584905 ----------------------------------------------ggtcatttttgtgtttttagtagaaatgaggttttgccatgttggccaggctgctcttgaa--------ctcctgacctcaagtgatccacctat---ctcggcctcctaaagtgctgggattacaggcgagagctaccgcacctggccTTCA- i macFas5.chr6 I 46 C 0 s papAnu2.chr6 173166888 150 - 174439528 ----------------------------------------------ggtcatttttgtgtttttagtagaaatgaggttttgccatgttggccaggctgctcttgaactcctgacctcctgacctcaagtgatccacctat---cttggcctcctaaagtgctgggattacaggtgagagctaccgcacctggccttca- i papAnu2.chr6 I 46 C 0 s chlSab2.chr4 89613312 142 - 91010382 ----------------------------------------------ggtcatttttgtgtttttagtagaaatgaggttttgccatgttggccaggctgctcttgaa--------ctcctgacctcaagtgatccacctat---ctcggcctcctaaagtgctgggattacaggcgagagctaccgcacctggccTTCA- i chlSab2.chr4 I 46 C 0 s calJac3.chr2 156460 191 - 204313951 cagtctcccaagtagctgggtttacaggtgcacaccaccatacctgtctaatttttgtatttttagtagaaacaaagttttgccatgttggccaggttggtctcaaa--------tgcctgacctcaagtgatccatccaccatctcggcctcctgaagtgctgggattacaggtgtgacacaccctgcccCGGCTACA- i calJac3.chr2 C 0 C 0 e mm10.chr13 46093001 22 - 120421639 I e canFam3.chr34 30177750 230 - 42124431 I a score=281559.000000 s hg38.chr3_KI270935v1_alt 47928 87 + 197351 TTTAATTTTTTAATTTTAGAGATGATTTCTAGTTTATTCACTCTAAGATCACTTAATGGATATCTACTGTGTGCCAACAGT-TTTGCC s panTro4.chr3_GL389630_random 12425 87 + 103936 TTTAATTTTTTAATTTTAGAGATGATTTCTAGtttattcactctaagatcacttaatggatatctactgtgtgccagCAGT-TTTGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694619 87 + 202140232 TTTAATTTTTTAATTTTAGAGATGATTTCTAGTTTATTCACTCTAAGATCACTTAATGGCTATCTACTGTGTGCCAACAGT-TTTGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793198 87 + 123690457 TTTAATTTTTTAATTTTAAAGATGATTTCTAGTTTATTCACTCTAAGATTATTTAATGGATATCTACTGTGTGCCAACAGT-TTTGCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 13619 87 + 180491593 TTTAATTTTTTAATTTTAGAGATGATTTCTAGTTTATTCACTCTAAGATAAGTTAATGGATATCTACTGTGTGCCAACAAT-TTTGCC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180278677 87 - 181584905 TTTAATTTTTTAATTTTAGAGATGATTTCTAGTTTATTCACTCTAAGATAAGTTAATGGATATCTACTGTGTGCCAACAAT-TTTGCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167038 87 - 174439528 tttaattttttaattttagagatgatTTCTAGTTTATTCACTCTAAGATAAGTTAATGGATATCTACTGTCTGCCAACAAT-TTTGCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613454 87 - 91010382 TTTAATTTTTTAATTTTAGAGATGATTTCTAGTTTATTCACTCTAAGATAAGTTAATGGATATCTACTGTGTGCCAACAAT-TTTGCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156651 88 - 204313951 TTTAATTTTTTAATTTTAGAGGTGATGTCTAGCTTGTTCACTCCAAGATCTCATAATGGCTTTCTACTGTGTGTCAACAATGTTTGCC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30177980 81 - 42124431 TCTAATTTTTTAA-CTTAGGAATGGATTCTGATTTGTTCAT----AGATTTCATATTGGATACCTACTCTTTGCCAGAAAT-TTTGT- i canFam3.chr34 I 230 C 0 e mm10.chr13 46093001 22 - 120421639 I a score=241830.000000 s hg38.chr3_KI270935v1_alt 48015 85 + 197351 TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGGCCTCAGATGTAGGGTGGGTTGGCAG--TGTGTTAGCTCAGGAGA s panTro4.chr3_GL389630_random 12512 85 + 103936 TTTTATGTCTGTTCTTTAAAATTGGCCCCAACTCAACAGATGACCTCAGATGTAGGGTGGGCTGGCAC--TGTGTTAGCTCAGGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694706 85 + 202140232 TTTTATGTCTGTTCTTTAAAATTGTTCCCAACTCAACAGATGGCCTCAGATGTAGGGTGGGCTGGCAG--TGTGTTAGCTCAGGAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793285 85 + 123690457 TTTCATGTCTGTTCTTTAAAATTGGCCCCAACTCAACGGATGGCCTCAGATGTAGGGTGGGCTGGCAG--TGTGTTAGCTCAGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 13706 84 + 180491593 TTT-ATGTATGTTCTTTAAAATTGGCCCCAACTCAACAGATGGCCTCAGATGTAGGGTGGGCTGGCAG--TGTGTTAGCTGAGAAGA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180278764 84 - 181584905 TTT-ATGTATGTTCTTTAAAATTGGCCCCAACTCAACAGATGGCCTCAGATGTAGGGTGGGCTGGCAG--TGTGTTAGCTGAGGGGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167125 84 - 174439528 TTT-ATGTATGTTCTTTAAAACTGGCCCCAACTCAACAGATGACCTCAGATGTAGGGTGGACTGGCAG--TGTGTTAGCTGAGAAGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613541 84 - 91010382 TTT-ATGTATGTTCTTTAAAACTGGCCCCAGCTCAACAGATGGCCTCAGATGTAGGGTGGGCTGGCAG--TGTGTTAGCTGAGGAGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 156739 83 - 204313951 TTT-CTGTATGTTCTTTAAAATTGGCCCCAGCTCAGTAGATGGCCTCAGTTGTGGGGTTG-CTGGCCG--TGTGTTAGCTCAGTAGA i calJac3.chr2 C 0 I 222 s mm10.chr13 46093023 81 - 120421639 TTCTCTGTATATGTCTTAAGACTGACTCTGAGTCAGT-----GTCTCATTCCTTAGGTTGG-TGCCAAACAGTGTTGGTTCAGATTC i mm10.chr13 I 22 C 0 s canFam3.chr34 30178061 57 - 42124431 TTTTAAGTTTGCTCTT------TGGCCCCAAGTCAGTATGTGGTTC----TTTAGGGTTAG--GGCAG--T---------------- i canFam3.chr34 C 0 C 0 a score=845931.000000 s hg38.chr3_KI270935v1_alt 48100 253 + 197351 CTTACACCGTTTCCAGGCTCCTTGAGCGGCTATGCTACATTTTTGTGTGTAGTACTAAATCCATTTGTTTTTTTA----AAACGGTTT---TCAAAAGTTAAATTCTAGCTCTTTT-------TGTTGTTGTT---TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGCGACTCAGCATGCAGAAGGTAAGAGC s panTro4.chr3_GL389630_random 12597 256 + 103936 CTTACACAGTTTCCAGGCTCCTTGAGCGGCTATGCTTCATTTTTGTGTGTCATACTAAATCCATTTGGTTTTTTA----AAACGGTTT---TCAAAAGTTAAATTCTAGCTCTTTT-------TGTTGTTGTTGTTTTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGACAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATCGGAACTGTGACTCAGCATGCAGAAGGTAAGAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199694791 250 + 202140232 CTTACACAGTTTCCAGGCTCCTTGAGTGGCTGTGCTACATATTTGTGTGTCATTCTAAATCCATTTGGTTTTTTA----ACACGGTTT---TCAAAGGTTAAATTCTAGCTTTTTT-------TGTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCACGAATCTTGAGAAATTGAGATTTGCTGATGGAAGAAGCATAAGAACATGGGAACTGTGACTCAGCATGCAGAAGGTAAGAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793370 250 + 123690457 CTTACACAGTTTCCAGGCTCCTTGAGCGGCTGTGCTACATATTTGTATGTCATTCTAAATCCATTTGGTTTTTTG----AAACGGTTT---TCAAAAGTTAAATTCCAGCTTTTTT-------TGTTGATGTT---TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGATG---GAAGCATAAGAACATCGGAACTGCGACTCAGTATGCAGAAGGTAAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 13790 246 + 180491593 CTTTCGCAGTTTCCAAGCTCCTTGAGCGGCTGTGCTATGTATTTTTGTATCATTCTAAATCCATTTGGTTTTTTA----AAATAGTTT---TGAAAAGTTAAATTCTAACTTTTT--------TTTTGTT------TTAGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGAGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCGTAAGAACGTCGGAACTTCGACTCTGCATGCAGAAGGTAAGAGC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180278848 247 - 181584905 CTTTCACAGTTTCCAAGCTCCTTGAGCGGCCGGGCTACGTATTTTTGTGTCATTCTAAATCCATTTGGTTTTTTA----GAACGGTTT---TGAAAAGTTAAATTCTAGCTTTTTT------GTTTTGTT------TTAGGAGATAAATTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCGTAAGAACGTCGGAACTTCGACTCTGCATGCAGAAGGTAAGAGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167209 247 - 174439528 CTTTCACAGTTTCCAAGCTCCTTGAGCGGCCGTGCTACGTATTTTTGTGTCATTCTAAATCCAtttggtttttta----gaacggttt---tgaaaagttaaattctagctttttt------gttttgtt------ttaggagatAAATTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCGTAAGCACGTAGGAACTTCGACTCTGCATGCAGAAGGTAAGAGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613625 247 - 91010382 CTTTTGCAGTTTCCAAGCTCCTTGAGCGGCCGTGCTACGTATTTTTGTGTCATTCTAAATCCATTTGATTTTTTA----AAATGGTTT---TGAAAAGTTAAATTCTAGCTTTTTT------GTTTTGTT------TTAGGAGATAAATTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCT-TCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACGTCGGAACTTCGACTCAGCATGCAGAAGGTAAGAGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 157044 252 - 204313951 CCTGCACTG--TCCAGGCACCTCGAGTGGCTGTGCCACGTATTTGTGTGTCATTCTCAATCCATTAGGGTTTTTA----AAGTGGTTT---TCAAAAGTTAAATTCTAGCtttttttaattttttttttt------ttaGGAGATAAAGTCCCTCCAATTAAACCAAATGCTGGGGAAGAATCTGTCATGAATCTTGACAAATTGAGATTTGCTGACG---GAAGCATAAGAACATCGGAACTACGACTCAGCATGCAGAAGGTAAGAGC i calJac3.chr2 I 222 C 0 s mm10.chr13 46093104 247 - 120421639 TGTCTATGCTTTCCAAACTCCTGGAATGGCTATTATATA-ATTTGAGTGGCATTCACAATCTTTCTTTTTTTCCCCCATAAGTGATTTCCCCCATATGTTAAATTCTGGCTTTCTT-------------T------TAAGGAGATAAAGTTCCTTCAATTAAGGCAAATGCTGGAGAAGAATCGGTTATGAATCTTGACAAGTTGAGATTTGCCGATG---GAAGTATAAGAACATCAGAACTACGCCTAAACATGCAGAAGGTAGGAGC i mm10.chr13 C 0 I 746 s canFam3.chr34 30178118 191 - 42124431 ------------CCAGATT---------------------ATGTGTATG--------------------TTTTCC----AAAC----T---CCAA----TAAATTCTCACTTTTTG-TCTGTGTGTTTTT------TAAGGAGATAAAATTCCCCCGATTAAACCAAATGCCGGGGAAGAGTCTGTCATGAATCTTGACAAACTGAGATTTGCCAATG---GAAGTGTAAGAACATCTGAACTACGACTCAACATGCAGAAGGTAAGCC- i canFam3.chr34 C 0 C 0 a score=170949.000000 s hg38.chr3_KI270935v1_alt 48353 52 + 197351 CTGGACTCGCTCTGGAGTGAGCAGGCTGGCTGCATACCTGGCCCTGCACT----GG s panTro4.chr3_GL389630_random 12853 52 + 103936 CTGGACTCGCTCTGGAGTGAGCAGGCTAGCTGCATACCTGGCCCTGCACT----GG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695041 52 + 202140232 CTGGACTCGCTCTGGAGAGAGCAGGCTGGCTGCATACCTGGCCCTGCACT----GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793620 52 + 123690457 CTGGTCTCGCTCTGGAGTGAGCAGGCGGGCTGCATACCTGGCCCTGCACT----GG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14036 52 + 180491593 CTGGACTCGCTCTGGAGTGAGCAGGCTGGCTGCATACCTGGCCCTGCACT----GG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279095 52 - 181584905 CTGGACTCGCTCTGGAGTGAGCAGGCTGGCTGCATACCTGGCCCTGCACT----GG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167456 52 - 174439528 CTGGACTCGCTCTGGAGTGAGCAGGCTGGCTGCATACCTGGCCCTGCact----gg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613872 52 - 91010382 CTGGACTCACTCTGGAGTGAGCAGGCTGGCTGCATACCTGGCCCTGCACT----GG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 157296 51 - 204313951 CTGG-CTCACTCTGGAGCAAACAG----GCTGTGTGCCTGGCCCTGCACTGCTGGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30178309 50 - 42124431 CTGCACACGCTCTGGAGTGTGCAGGCTG--TGTGTCCATAGCCTTATGCT----GG i canFam3.chr34 C 0 I 752 e mm10.chr13 46093351 746 - 120421639 I a score=177470.000000 s hg38.chr3_KI270935v1_alt 48405 70 + 197351 ttt------tgtttttttaaaaacagatctagggggatgcaggtgcagctttgtgtggatg----tactgggaggtggtg s panTro4.chr3_GL389630_random 12905 70 + 103936 ttt------tgtttttttaaaaacagatctagggggatgcaggtgcagttttgtgtggatg----tactgggaagtggtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695093 70 + 202140232 ttt------tgtttttttaaaaatagatctagggggatgcaggtgcagttttgtgtggatg----tactgggaggtggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793672 73 + 123690457 ttt------tg-ttttttaaaaatagatttagggggatgcaggtgcagttttgtgtggatgtttttactgtgatgtggtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14088 69 + 180491593 ttt------tgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----taccatgaggtggtg i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279147 69 - 181584905 ttt------tgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----taccatgaggtggtg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167508 69 - 174439528 ttt------tgtgtttttaaaaatagatttagggGGATGCAGGTGCAG-TTTGTGTGGATG----TACCGTGAGGTGGTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613924 69 - 91010382 ttt------tgtttttttaaaaatagatttagggggatgcaggtgcag-tttgtgtggatg----taccgtgaggtggtg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 157347 69 - 204313951 ttttctgtgtgtttttattttaatagatttagggg--tacaggtgcagttttgtgtggatg----tact-----gtggtg i calJac3.chr2 C 0 I 342 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I a score=1129071.000000 s hg38.chr3_KI270935v1_alt 48475 446 + 197351 gagtctgggcttttcatgtacctgtcacccaagtcgtgtgtgttgtactcagcaggtaattgctcatccccacccctcccgctttttggagcccacagtct----------gttagtccactccgtgtgtccatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgaccttctga-----ctcacttaggatagtgacctcccattccatccgtctggctgcagaagacatgattgcattc-ttttttt-atggccaagtagtatttcatggtatatat----gtaccacattttctttatccggtcgtccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcaataaacatacgagGCTGCACCAGTATGTGGAGGTAAACAGCAGTAGGACATACTCCTCACTGTATCAAGAATATGAAAGAGAC------------------C s panTro4.chr3_GL389630_random 12975 457 + 103936 gagtctgggcttttcatgtacccgtcacccaagtcgtgtgtgttgtactcagcagataattgctcatccccacccctcccgctttttggatcccccagtct--------ctgttagtccactccgtgtgtccatgtgtactcaccgttcagctcccacttccaagggagaatgtgtgacacttgaccttctgagtcacttcacttaggatagtgacctcccgttccatccgtctggctgcagaagacatgattgcgttc-ttttttttatggctgagtagtgtttcatggtatatatatatgtaccacattttctttatccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgaccagtgctgctataaacatacgaggctgcaccagtatctG-AGGTGAACAGCAGTAGGACATACTCCTCACTGTATCAAGAATATGACAGAGAC------------------C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695163 446 + 202140232 gagtctgggcttttcatgt-------acccaagtcgtgtgtgttgtactcagcaggtaattgctcatccctacccctcccgctttttggagctcccagtct--------ctgttagtccactccgtgtgtccatgtgtactcacggttcagctcccacttccaagtgagaatgtgtgacacttgaccttctgagtcacttcacttaggatagtgacctcccgttgcatccgtgtggctgcagaagacatgattatgttg-ttttttt-atggctgagtagtatttaatggtatatag----gtaccacattttcttcatctggtcgtccgttgatgggcacttaggttgattccatgattttgctattgtgactagtgctgcgataaacatacgaggctgcaccagtatctGGAGGTGAACAGCAGTGGGACATACTCCTCACTGTATCAAGAACATGAAAGAGAC------------------C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120793745 453 + 123690457 gagtctgggcttttcatgtacccatcacccaagtcgtgtgtgttgtacccagcaggtaattgctcatccctacccctcccgctttttgaagcccccagtctgttccagtctgttagtccactccgtgtgtccaggtgtactcaccgttcagcgcccacttc-------aagtgagtgacacttgaccttctgagtcacttcacttaggatagtgacctccggttccatccgtgtggctgcagaagacatgattgcgttc-ttttttt-gtggctgagtagtatttcatggtatatat----gtaccacattttcttcatccggtcgtccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcaataaacatatgaggctgcaccagtatctGGAGG-AAACAGCAGCAGGATGTGCTCCTCACTGTACCAAGAATATGGAAGAGAC------------------C i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14157 453 + 180491593 gagtctgggcttttcacat------cacccaagtcatgtatgttgtacccagcaggtaattgctcatccccacccctcccactttttggagcccccagtct--------ctgttagtccactctgtgtggccacgtgtactcaccgttcagtttccacttccaagtaagaat--gtgacacttgacct--tgagtcacttcacttaggagagtga---cctgttccatctgtgtggctgcagaagacatgattgcgtta-ttttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccattgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgaggctgcaccagtatc--GAGGTAAACAGCAGTAGGATGTACTCCTCACTGTATCAAGAATATGAAAGAGACCAGGAGGCCTGAACTATAC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279216 439 - 181584905 gagtctgggcttttcacat------cacccaagtcatgtatgttgtacccagcaggtaattgctcatccccacccctcccgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccattcagctcccactt-caagtgagaat--gtgacacttgaccttctgagtgacct------------------cctgttccatccacatggctgcagaagacatgattgcgtta-tttttgt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccattgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgaggctgcaccagtatc--GAGGTAAACAGCAGTAGGACGTACTCCTCACTGTATCAAGAATATGAAAGAGACCAGGAGGCCTGAACTATAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173167577 454 - 174439528 GAGTCTGGGCTTTTCACGT------CACCCAAGTCATGTATGTTGTACCCAGCAAGTAATTGCTCATCCCCACCCCTCCCGCTTTTTGGAGCCCCCAGTCT--------CTTTTAGTCCACTCCGTGTGGCCACGTGTACTCaccattcagctcccacttccaAGTGAGAAT--GTGACACTTGACCTTCTGAGTCACTT-----AGGATAGTGACCTCCTGTTCCATCCACGTGGCTGTAGAAGACATGAGTGCgttatttttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggTCATccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgAGGCTGCACCAGTATC--GAGGTAAACAGCAGTAGGACGTACTCCTCACCGTATCAAGAATATGAAAGAGACCAGGAGGCCTGAACTATAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89613993 446 - 91010382 gagtctgggcttttcatgt------cacccaagtcgtgtatgttgtacccagcagg-------tcatccccacccctcccgctttttggagcccccagtct--------ctgttagtccactccgtgtggccacgtgtactcaccattcagcttccacttccaagtaagaat--gtgacacttgaccttctgagtcactt-----aggatagtgacctcctgttccatccacgtggctgcagaagacatgattgcgtta-ttttttt-atggctgagta---tttcatggtgtttat----gtaccacattttctttgtccggtcatccgttgatgggcacttaggttgattccatgactttgctattgtgactagtgctgcgataaacatacgagGCTCCACCAGTATC--GAGGTAAACAGCAGTAGGACGTACTCCTCACCATATCAAGAATATGAAAGAGACCAGGAGGCCTGAACTATAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 157758 426 - 204313951 gagtctgggcttttcgtgtccccatcccccaagttgtatatgttgtacccagtaggtaattgctcatccccacccctcccgctttttggagccccgagtct--------ctattagtctac-ccatatgtccatgtatactcacagttcagctcccacttccaagtcagaatgtgcaacagttgaccttcagagttatttcacttagggtaatgacctcctgttccatccaggtggctgggaaagacacgatctagtt--ctttttt-atgtctgagtagtattccacggtgcatat----gtgccc---------------atcatctgttaatgggcacgtaggtgga----------ttgctgttgtgattggtgctgtgatgaacgtaccaggctgcaccagtatctGGAGGAAAACGGCAGTAGGACATACTCCTTACTGTGTCAAGAATATGAAAGAaat------------------c i calJac3.chr2 I 342 I 268 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I a score=132626.000000 s hg38.chr3_KI270935v1_alt 48921 59 + 197351 AGAAGTGCACTTCTTCTCCACATAGAAGGTCAGCAGGCCAGGGCAGAATTAGTGACTGC s panTro4.chr3_GL389630_random 13432 59 + 103936 AGAAGTGCACTTCTTCTCCACATAGAAGGTCAGCAGCCCAGGGCAGAATTAGTGACTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695609 59 + 202140232 AGAAGTGCACTTGTTTTCCACATAGAAGGTCAACAGGCTAGGGCAGAATTAGTGACTGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794198 59 + 123690457 AGAAGTGCACTTCTTTTCCACAGAGAAGGTCAGCAGGCTAGGGCAGAATTAGTGACTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14610 56 + 180491593 AGAAGTGCAC---TTTTCCACATAGCAGGTCAGCAGGCTAGGGCAGAACTAGTGACTGC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279655 56 - 181584905 AGAAGTGCAC---TTTTCCACATAGAAGGTCAGCAGGCTAGGGCAGAATTAGTGACTGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173168031 56 - 174439528 AGAAGTGCAC---TTTTCCACATAGAAGGTCAGCAGGCTAGGGCAGAATTAGTGACTGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89614439 56 - 91010382 AGAAGTGCAC---TTTTCCACATAGAAGGTCAGCAGGCTAGGGCAGAATTAGTGACTGT i chlSab2.chr4 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I e calJac3.chr2 158184 268 - 204313951 I a score=221740.000000 s hg38.chr3_KI270935v1_alt 48980 70 + 197351 TTAGCATCCAGGACAGCCTTCTGTGGTTCACTCGTGTGTGCTTGGGCATGACCTCCGTGCCCTGACCGTC s panTro4.chr3_GL389630_random 13491 70 + 103936 TTAGCATCCAGGACAGCCTTCTGTGGTTCACTCGTGTGTGCTTGGGCATGACCGCCGTGCCCTGACCGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695668 70 + 202140232 TTAGCATCCAGGACAGCCTTCTGTGGTTCACTCGTGTGTGCTTGGGCGTGACCTCCGTGCCCTGACCGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794257 70 + 123690457 TTAGCATCCAGGACAGCCTTCTGTGGTTCACTCGTGTGTGCTTGGGCGTGACCTCCGTGCCCTGACCGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14666 70 + 180491593 TTAGCATCCAGGACAGCCTTCTCCGGTTCACTCGTGTGTGCTTGGGCATGACCTCCGTGCCCTGACCGTC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279711 70 - 181584905 TTAGCATCCAGGACAGCCTTCTCCGGTTCACTCGTGTGTGCTTGGGCGTGACCTCCGTGCCCTGACCGTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173168087 70 - 174439528 TTAGCATCCAGGACAGCCTTCTCTGGTTCACTCGTGTGTGCTTGGGCGTGACCTCCGTGCCCTGACCGTC i papAnu2.chr6 C 0 I 6789 s chlSab2.chr4 89614495 70 - 91010382 TTAGCATCCAGGACAGCCTTCTCTGGTTCACTCGTGTGTGCTTGGGCGTGACCTCCGTGCCCTGACCGTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 158452 70 - 204313951 TCAGCATCCAGGACAGCCTTCTCTGGTTCACTCGAATGTGCCTGGGCATGGCCTCTGTGCTCTGACCATC i calJac3.chr2 I 268 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I a score=846340.000000 s hg38.chr3_KI270935v1_alt 49050 391 + 197351 GCTGGCTGTCATGGATGAGTCACAGTGTGGAGGAGAGGGAGCCGCAGGACTGCCGGAGAAGCTCCGTCCCCagcagggcagctttctcttag-aggtttcctggagttcaacacaacactggtgcttacatctcaggcccagatattgatcatgtcatcatgcctggcttccagcagctcggaaacgtctttaAGCTAGACCTGTTGCTGCCCCTAAATATACTCAGCAGAGAGGGAGAGTGGGCGGCAGGTGGACAGTGATCTGTGCGGCCTGTGCTGCTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccgtccagtatggcagccattagccat---ggggccgtggagaacctgatatatagtcagtct s panTro4.chr3_GL389630_random 13561 391 + 103936 GCTGGCTGTCATGGATGAGTCACAGCGTGGAGGAGAGGGAGCCGCAGGACCGCCGGAGAAGCTCTGTCCCCAGCAGGGCAGCTTTCTCTTAG-AGGTTTCCTGGAGTTCAACACAACACTGGTGCTTACATCTCAGGCCCAGATATTGATCATGTCATCATGCCTGGCTTCCAGCAGCTCGGAAACGTCTTTAAGCTGGACCTGTTGCTGCCCCTAAATATACTCAGCAGAGAGGGAGAGTGGGCGGCGGGTGGACAGTGATCTGTGCGGCCTGTGCTGCTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtttgccatccagtatggcagccattagccat---ggggccgtggagaacctgatatatggtcagtct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199695738 374 + 202140232 GCTGGCTGTCATGGATGAGTCACAGCGT------------------GGACCACCAGAGAAGCTCAGTCCCCagcagggccgctttctcttag-aggtttcctggagttcaacacagcactggtgcttacatctcaggcccagatactgatcatgtcatcacgcctggcttccagcagctcggaaatgtctttaagctggACCTGTTGCTGCCCCTAAACATACTCAGAAGAGAGGGAGAGTAGGCGGTGGGTGGAAAGTGATCTGTGCGGTCTGTGCTGCTGGGAGTCA------------------gtccagtaagaccgtctgtgatgatggaaatgtt--gagtgtttgccgtccagtatggcagccattagccac--gggggctgtggagaacctgatatatagtcagtct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794327 391 + 123690457 GCTGGCTGTCATGGATGAGTCACAGCGTGGAGGAGAGGGAGCCACAGGACCACCGTAGAAGCTCAGTCCCCAGCAGGGCAGCTTTCTC--AG-AGGTttcctggagttcaacacaacactggtgcttacatctcaggcccagatattgatcatgtcatcacgcctggcttccagcagctcggaaatgtctttaagctggACCTGTTGCTGCCCCTAAATATACTCAGAAGAGAGGGAGAGTGGGCGGCGGGTGGAAAGTGATCTGTGCTGCCTGTGCTGCTGGGAGTCG------------------gtccagtaggaccgtctgtgatgatggaaatgtt--gagtgtctgccgtccagtatggcagccattagccac-agggggctgtggagaacctgatatatagtcagtct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 14736 396 + 180491593 GCAGGCTGTCATGGATGAGTCACAGCGTGGAGGAGAGGGAGCAGCAGGACCGCGGGAGAAGCTCAGTCCCCAGCAGGGCAGCTTTCTCTTCGCAGGTTTCCTGGAGTTCAACATAATACTGGTGCTTACATCTCAGGCCCACATATTGATCATGTCATCATGCCTGACTTCCAGCAGCTTGGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCGGTGGGTGGAAACTGATGTGTGCAGCCTGTGCTGCTGGGAGTCG------------------gtccagtgggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccac-agagggctgtggagaacttgatatatagtcagtct i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180279781 396 - 181584905 GCAGGCTGTCATGGATGAGTCACAGCGTGGAGGAGAGGGAGCAGCAGGACCACGGGAGAAGCTCAGTCCCCAGCAGGGCAGCTTTCTCTTTGCAGGTTTCCTGGAGTTCAACACAATACTGGTGCTTATATCTCAGGCCCACATATTGATCGTGTCATCATGCCTGACTTCCAGCAGCTTGGAAATGTCTTTAAGCTGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCAGCAGGTGGAAACTGATGTGTGCGGCCTGTGCTGCTGGGAGTCG------------------gtccagtgagaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtatggcagccattagccac-agagggctgtggagaacttgatatatagtcagtct i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89614565 396 - 91010382 ACGGGCTGTCATGGATGAGTCACAGCGTGGAGGAGAGGGAGCAGCAGGACTGCCGGAGAAGCTCAGTCCCCAGCAGGGCAGCTTTCTCTTAGCAGGTTTCCTGGAGTTCAACATAATACTGGTGCTTACATCTCAGGCCCACATATTGATCATGTCATCATGCCTGGCTTCCAGCAGCTTGGAAATGTCTTTAAGCCGGGCCTGTGGCTGCCCCTGAATATACTCAGAAGAGAGGGAGAGTGGGCGGTGGGTGGAAACTGATGTGTGCGGCCTGTGCTGCTGGGAGTCG------------------gtcccataggaccgtctgtgacgatggaaatgttccgagtgtttgccgtccagtgtggcagccattagccac-agagggctgtggagaacttgatatatagtcagtct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 158522 382 - 204313951 ACTGGCTGTCGTGGATGAGTCACAGTGTGGAGGAGATGGAGCCGCAGGGC-GCCTGAGAAGCTcagtccccagcagagc-------------------------------acacaacactggtgcttacatctcagg-ccagatagtgaccatgtcatcacacctggcttccagcagctcggaaatgtctttaagctgggCCTGTTGCTGCCCCTAAATATACTCAGAAGAGGGGGAGAGTGGGCCGTGGGTGGAAACTGATCTCTGCAGCCTGTGCTTCTGGGAGTCAGCCTCCCACATcaggactgtccaataggactgcccgtgatggcagaaatgttccaagtctttgccgtccagtatggcaaccactagccacgggagggctatggagaacttggtatatagtcagtct i calJac3.chr2 C 0 I 146 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=11284.000000 s hg38.chr3_KI270935v1_alt 49441 5 + 197351 aagaa s panTro4.chr3_GL389630_random 13952 5 + 103936 aagga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696112 5 + 202140232 aagaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794718 5 + 123690457 aagaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15132 5 + 180491593 gagaa i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280177 5 - 181584905 aagaa i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89614961 5 - 91010382 aagaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 159050 5 - 204313951 aAGAA i calJac3.chr2 I 146 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30178359 752 - 42124431 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=405189.000000 s hg38.chr3_KI270935v1_alt 49446 175 + 197351 actcaattCCTCTAATAACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTGCT-------ATTTGCAAGAATTTCTGCGTA----TTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGAAAGGCATTTGGTGTT--------AGACAC-----------AAGAGAACAGGTTCCCTGCTG-ACAATTTTCAGAGGCCC s panTro4.chr3_GL389630_random 13957 174 + 103936 actgacttCCTCTAATAACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTACT-------ATTTGCAAGAATTTCTGCGTA----TTTTCTAGAAA---GAAGTCCACTGCTTTAGTCCTATTCTGAAAGGCATTTGGTGTT--------AGACAC-----------AAGAGAACAGGTACCCTGCTG-ACA-TTTTCAGAGGCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696117 174 + 202140232 actgaattCCTCTAATAACAAGGATTCTT-GTCCAAGAATGAGATCTCTTCTCTACT-------ATTTGCATGAATTTCTGTGTA----TTTTCCAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGAAAGGCATTTGGTGTT--------AGACAC-----------GAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794723 174 + 123690457 actgaattCCTCTAATAACAAGGATTCTT-GTCCAAGAATGAGATCTCTTGTCTACT-------ATTTGCAAGAATTTCTGCATA----TTTTCTGAAAA---GAAGTCCATTGCTTTAGTCGTATTCTGAAAGGCATTTGGTGTT--------AGACAC-----------AAGAGAACAGGTTCGCTGCTG-ACA-TTTTCAGAGGCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15137 175 + 180491593 actgaattCCTCTAATAACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTACT-------ATTTGCAAGAATTTCTGCGTA----TTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGAAAGGCGTTTGGTGTTA-------AGACAC-----------AAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280182 175 - 181584905 actgaattCCTCTAATAACAAGGATTCTT-GTCCATGAATGAGATCTCTTGTCTACT-------ATTTGGAAGAATTTCTGCATA----TTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTATTCTGAAAGGCGTTTGGTGTTA-------AGACAC-----------AAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89614966 175 - 91010382 actgaattCCTCTAATAACAAGGATTCTT-GGCCATGAATGAGATCTCTTGTCTACT-------ATTTGCAAGAATTTCTGCGTA----TTTTCTAAAAA---GAAGTCCATTGCTTTAGTCCTGTTCTGAAAGGCGTTTGGTGTTA-------AGACAC-----------AAGAGAACAGGTTCCCTGCTG-ACA-TTTTCAGAGGCCT i chlSab2.chr4 C 0 I 156 s calJac3.chr2 159055 177 - 204313951 ACTGAGTTCCTCTAATAACAAGGATTCTT-GTTCATGAATGAGGTCTCTTGTTTACT-------ATTAGCAAGAATTTCCGTGAA----TATTT--GTAA---AAAGTCCA-TGCTTTTGTCCTATTCC-AAAGGCATTTGGTGTTGCAGACACAGACAC-----------AAGAGCAAAGGTTC-CTGCTG-ACA-TTGTCAGAGGCCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30179111 190 - 42124431 ACCAGATTCTTCTAAT-ACAGGGATTCTTGGTCCACAAATGAGATCTC-TGTCCAGTTGAAGTCATTTGCAAG-ATTTCTGTGGAGACGTTTTCCGAAAAGAGGAAGTCCCT---TTTAGTTCTATCCTGAA--GCGTCCAGTGGC--------ACAAACTCTAATCATCAAAAGAAAAAAGTTGCATACTGCATA-CTTCTGTAGG--- i canFam3.chr34 I 752 C 0 e mm10.chr13 46093351 746 - 120421639 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=244611.000000 s hg38.chr3_KI270935v1_alt 49621 105 + 197351 GTGCCCTTCGGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGTTTTGTGGAACGGTGAGAAGAACAGCGTGACTAAGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG s panTro4.chr3_GL389630_random 14131 105 + 103936 GTGCCCTTCAGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTAAGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696291 105 + 202140232 GTGCCCTTCAGTCTTCAGGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTAAGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120794897 105 + 123690457 GTGCCCTTCAGTCTTCAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAAAGGTGAGAAGAACAGCGTGACTAAGGCACAGAAG-----------------GCTGAGTGATGCCCTGCAGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15312 105 + 180491593 GTGCCCTTCAGTCTTGAAGTAAG-ATTGAGCTTGAGGGAGGCTTTCTGGAACGGTGAGAAGAATAGCGTGATTAAGGCACAGAAG-----------------GCTGAGTGATGCCTTGCAGTA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280357 102 - 181584905 GTGCCCTTCGGTCTTCAAGTGAG-GCTGGGCTTGAAGGAGGCTTTGTGGAACGGTG---AGAACGGTGTGACTAAGGCACGGAAG-----------------GCTAAGGGATGCCCTGCAGTA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89615297 105 - 91010382 GTGCCCTTCAGTCCTGAAGTGAG-GCTGGGCTTGAGGGAGGCTTTGTGGAACGGTGAGAAGAACAGCGTGACTAAGGCACAGAAG-----------------GCTAAGGGATGCCCTGCAGTA i chlSab2.chr4 I 156 C 0 s calJac3.chr2 159232 102 - 204313951 GTGCACTTCATTCTTCAAGTGAG-GCTGGGCTTGAGAGAGGCTTTGTGGAATGCTG---AGAACAGCATGACTAAGGCCCAGAAG-----------------GCTGAGGGATATCCTGCAGGA i calJac3.chr2 C 0 I 132 s canFam3.chr34 30179301 113 - 42124431 ----------AACTTCAGAGAAGTTCTGGGCTTTAGGGAAACTTCCTGGAAAGGTAAGGCGAATAGTGCGAGTGAAAGGCAGAGGTTTGTTTTAGGAAACCAGCCAAGAGGAACTGAGCAGAA i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=480013.000000 s hg38.chr3_KI270935v1_alt 49726 205 + 197351 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGAAAGAAGGAACCCTTGCGTTAGAGAATGGGAACATGCCTTAGGATATAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAaacaaggtgtgtcttggtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaacagagctt s panTro4.chr3_GL389630_random 14236 205 + 103936 CTTTTGTAGGGT---------------TGGAAGCCAGCTGGGAAAGAAGGAACCCTTGCATTAGAGAATGGGAACATGCCTTAGGATAGAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAAACAAGGTGTGTCTTCgtgcctgctgtatcccaggctccgtgaggtgccggagtcagcactgaacaaacagagctt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696396 205 + 202140232 CTTTTGTAGGGT---------------GGGAGGGCAGCTGGGAAAGAAGGAACCAGTGCATTAGAGAACGCGAACACGACTTCGGATATAGAAATGGCAAATC--TGAGATGGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCGCCAaacaaggtgtgtcttggtgcctgctgtatcccagactccgtgaggtgctggagtcagcactgaacaaacagagctt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795002 205 + 123690457 CTTTTGTAGGGT---------------TGGAGGCCAGCTGGGAAAGAAGGAACCATTGCATTAGAGAATGGGAACAGGCCTTAGGATATAGAAATGGCAAATC--TGAGATAGTTTGAAGTGAGAA-TACTAGAAGTGTTCCCACCAaacaaggtgtgtcttggtgcctgctgtatcccaggctccgtgaggtgctggagtcggcactgaacaaacagagctt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15417 207 + 180491593 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAACCATTGTATTAGAGAATGGGAACATGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAACattctcaccaaacaaggtgtgtcttggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaacagagctt i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280459 207 - 181584905 CTTTTGTAGGGT---------------TGGAGGCCAGCTGTGAGAGAAGGAGCCATTGCATTAGAGAATGGGAACATGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAACattctcaccaaacaaggtgtgtcttggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaacagagctt i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89615402 201 - 91010382 CTTTTGTAGGGT---------------TGGAGGCCAGCTTTGAGAGAAGGAACCATTGCATTAGAGAATGGGAACATGCCTTAGGATACAGAAATGGCAAATCCGTGAGACAGTTTGAAGTGAGAA-TACTAGAAACattctcaccaaacaaggtgtgtcttggtgcctgctgtatcgcaggctccgtgagatgctggagtcagcactgaacaaaCA------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 159466 196 - 204313951 CTTTTGTAGGGT---------------TGGAGGCCAGCTAGGAAAGAAGGAATCATTGCACTAGAGAATGGGAAGGTGCCTTAGGATGTAGAAATGGCAAATTCATGAGATATTTTGAAGTGAGAA-TACTAGAAGCATTCCCACCAAACAAGGTGTGT-----------ctgtatgctaggctctgtgagatgctggagtcagcactgaacaaacagaagtt i calJac3.chr2 I 132 C 0 s canFam3.chr34 30179414 166 - 42124431 CTTTTGCAGGGTATTGATACCGGGGAATGGCCACCAGCTACGACAGATATAATCCTTGCACTATATAGTAGGAAATTCTATTTGGGTGTGGAAATGATGAACC--CATGATATTTTGAAATGGGAAGTCCTAGAAACATTTCCACCAAGTAAGGC-------------------------------------------------------ACATACAGAtctt i canFam3.chr34 C 0 I 209 e mm10.chr13 46093351 746 - 120421639 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=148482.000000 s hg38.chr3_KI270935v1_alt 49931 74 + 197351 cctatgcttgcgg-aaatgcatttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATC s panTro4.chr3_GL389630_random 14441 74 + 103936 cctaagcttgcag-aaatgcatttcgttgggggaAGGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696601 74 + 202140232 ccgatgcctgTGG-AAATGTGTTTCCTTGGGGGAAGGGATTTTTCTGCTGACTCTGGCTATTAATAGTAACA--ATC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795207 75 + 123690457 cctgtgcttgtgg-aaatgcgtttcgtt-ggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGGTACATtgtt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15624 74 + 180491593 cctgtgcttgtgg-aagtgcgtttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280666 74 - 181584905 cctgtgcttgtgg-aagtgcgtttcgttgggggaagGGATTTTTCTGCTGACTCTGGCTATTAATAGTAAGA--ATC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89615603 71 - 91010382 ---GTGCTTGTGG-AAATGCGTTTCGTTGGGGGGAGGGATTTTTCTGCTGACTCTAGCTATTAATAGTAAGA--ATC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 159662 71 - 204313951 cccatgctcgtggaaaatgcatttcattgg----aggaaTTTttgtgctgactctggctattaatagtaaga--att i calJac3.chr2 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179580 209 - 42124431 I e papAnu2.chr6 173168157 6789 - 174439528 I a score=24460.000000 s hg38.chr3_KI270935v1_alt 50005 15 + 197351 aaaaaaagaaatgag s panTro4.chr3_GL389630_random 14515 15 + 103936 aaaaaaagaaatgag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696675 15 + 202140232 aaaaaaagaaatgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795282 12 + 123690457 ggaaacaggccc--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15698 15 + 180491593 AAAAAAAGAAATGAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180280740 15 - 181584905 AAAAAAAGAAATGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173174946 15 - 174439528 AAACAAAGAAGGGGG i papAnu2.chr6 I 6789 C 0 s chlSab2.chr4 89615674 15 - 91010382 AAAAAAAGAAATGAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 159733 11 - 204313951 ----aaaaacatgag i calJac3.chr2 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179580 209 - 42124431 I a score=65063.000000 s hg38.chr3_KI270935v1_alt 50020 40 + 197351 gtaaattgatagaaacaggcccccaaatgtggccataaac s panTro4.chr3_GL389630_random 14530 40 + 103936 gtaaattgttagaaacaggcccccaaatgtggccataaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696690 40 + 202140232 gtaaattgttaggaataggcccccaaatgtggccaaaagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795294 24 + 123690457 gtacattgttggaaacaggccccc---------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 15713 39 + 180491593 GTAAATTGTTGGGaacaggcccccaaa-ctggccataaac i rheMac3.chr6 C 0 I 351 s macFas5.chr6 180280755 40 - 181584905 GTAAATtgttgggaacaggcccccaaatctggccataaac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173174961 37 - 174439528 aca---tgttgggaacaggccccccagtgtggccataaac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89615689 40 - 91010382 GTAAATtgttgggaacaggcccccaaatctggccataaac i chlSab2.chr4 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179580 209 - 42124431 I e calJac3.chr2 159744 0 - 204313951 C a score=202759.000000 s hg38.chr3_KI270935v1_alt 50060 118 + 197351 tggccccaaaactggccataaacaaaatctctgcagca-tgtgacgtgctcgtgatggccaggacgaccacgcaggaaggttatgggtttaccgtaatgagggcaaggaacacctggcc s panTro4.chr3_GL389630_random 14570 118 + 103936 tggccccaaaactggccataaacaaaatctctgcagca-tgtgacatgctcgtgatggccatgacgcccacgctggaaggttatgggtttaccgtaatgagggcaaggaacacctggcc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696730 118 + 202140232 tggccccaaaactggccataaacaaaatctctgcagca-tgtgacatgctcgtggtggccatgacacccacgccggaaggctgagggtttactggaatgagggcaaggaacacctggcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795318 117 + 123690457 --tccccaaaactggccataaacaaaatctctgcagcactgtgacatgctcatgatggccatgacgcccgtgccagaaggttgtgggtttaccataatgagggcaaggaacacttggcc i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180280795 119 - 181584905 tggccccaaaactggccataaacaaaatctctgcagcactgtgacgtgctcgtgatggccatgacgcccacgctggaaggctgtcagtttactggaatgagggcaaggaacacctggcc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173174998 119 - 174439528 tggcccccaaactggccataaacaaaatctctgcagcgcTGTGACGTGCTCGTGATGGCCATgacgcccacgctggaaggttgtgggtttaccagaatgagggcaaggaacacctggcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89615729 119 - 91010382 tggccccaaaactggccataaacaaaatctctgcagcactgtgacatgctcgtggtggccatgacacccacgctggaaggctgtcagtttactggaatgagggcaaggaacacctggcc i chlSab2.chr4 C 0 C 0 e rheMac3.chr6 15752 351 + 180491593 I e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179580 209 - 42124431 I e calJac3.chr2 159744 0 - 204313951 C a score=169578.000000 s hg38.chr3_KI270935v1_alt 50178 107 + 197351 cacccagagtgga-aaacctcttaag-------------accttcttaaaccacaaacaatagcatg----agcgctct-gtgccttaaggacatgctcctgctgcagataactagccagacccat s panTro4.chr3_GL389630_random 14688 107 + 103936 cacccagagcgga-aaacctcttaag-------------acgttcttaaaccacaaacaatagcatg----agcaatct-gtgccttaaggacatgctcctgctgcagataactagccagacccat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696848 108 + 202140232 cacccaggggggagaaacctcttaag-------------gcgttcttaaaccacaaacaatagcatg----agtgatct-gtgccttaaggacatgctcctgctgcagataactagccagacccat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795435 120 + 123690457 cacccagagcaga-aaacctcttaaggcagtcttaaaccacagtcttaaaccacaaacagtagcatg----agcgatct-gtgccttaaggacatgctcctgctgcagataactagccagacccat i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180280914 106 - 181584905 cacccagagtgga-aaaccgcttaag-------------tgtttcttaaaccacaaacagtagcatg----agcgatct-gtg-cttaaggacgtgtgcctgctgcagataactagccagacccat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173175117 107 - 174439528 cacccagggcgga-aaaccacTTAAG-------------gggttcttaaaccacaaacagtagcatg----agcgatct-gtgccttaaggacatgttcctgctgcagataactagccagacgcat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89615848 106 - 91010382 cacccagggcgga-aaaccgcttaag-------------ggtttcctaaaccacaaacagtagcatg----agcaatct-gtg-cttaagaacatgttcctgctgcagataactagccagacccat i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30179789 96 - 42124431 tactcaaagtgaa-aaac------aa-------------tgattgtatgagtgcagatggttgtttaccctcgggatctagtg------ggagctacagctgctgc----cactgcctggagtcat i canFam3.chr34 I 209 I 227 e rheMac3.chr6 15752 351 + 180491593 I e mm10.chr13 46093351 746 - 120421639 I e calJac3.chr2 159744 0 - 204313951 C a score=228163.000000 s hg38.chr3_KI270935v1_alt 50285 144 + 197351 ccctttatttcctgtaaggaatactttcagtaagtcttatc---actggcttgctgtcaataaatacgtgggtaaatctctgtttgaggcttttggctctgaaggctgtgagacccctgatttcccactccacactctatatttctg s panTro4.chr3_GL389630_random 14795 144 + 103936 ccctttatttcctgtaaggaatacttttagtaagtcttatc---actggcttgctgtcaataaatacgtgggtaaatctctgttcaaggctcttggctctgaaggctgtgagacccctgatttcccactccacactctatatttctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199696956 141 + 202140232 ccctttatttcccataagcaatacttttagtaagtcttatc---actggcttgctgtcaataaataagtgggtaaatctctgttcgaggctctcggctctgaaggctgtgaga-ccgtgatttccaactccatactgtatatttc-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795555 143 + 123690457 ccctttatttcctgtaaggaatgcttttagtaagtcttatc---actgtcttgctgtcagtaaatacgtgggtaaatctctgttcaagtctctcagctctgaaggctgtgaga-ccccgatttcccactccacactctatatttctg i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180281020 144 - 181584905 ccctttgtttcccgtaaggaatacttttagtaaatcttatg---actggcttgttgtcagtaaatatgtgagtaaacctctgtttgaggctctcagctctgaaggctgtgagaccccagatttcccaccccacgcgctatatttctg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173175224 146 - 174439528 ccctttgtttcccgtaaggaatacttttagtaaaTCTTATAGTCATAAGCTTgttgtcaataaatatgtgagtaaatctctgttcgaggctctcagctctgaaggctgtgagacccctgatttcccactccacatgctat-tttctg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89615954 144 - 91010382 ccctttgtttcccataaggaatacttttagtaaatcttatg---actggcttgttgtcagtaaatacgtgggtaaatctctgttcgaggctctcagctctgaaggctgtgagatccctgatttcccaccccacgcgctatatttctg i chlSab2.chr4 C 0 C 0 e rheMac3.chr6 15752 351 + 180491593 I e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179885 227 - 42124431 I e calJac3.chr2 159744 0 - 204313951 C a score=44184.000000 s hg38.chr3_KI270935v1_alt 50429 18 + 197351 tgtgtgtgtctttacttc s panTro4.chr3_GL389630_random 14939 18 + 103936 tgtgtgtgtctttaattc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697097 16 + 202140232 --tgtgtgtctttaattc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795698 18 + 123690457 tgtgtgtgtctttaattc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 16103 18 + 180491593 tgtgtgtgtctttaattc i rheMac3.chr6 I 351 C 0 s macFas5.chr6 180281164 18 - 181584905 tgtgtgtgtctttaattc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173175370 18 - 174439528 tgtgtgtgtctttaattc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89616098 18 - 91010382 tgtgtgtgtctttaattc i chlSab2.chr4 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30179885 227 - 42124431 I e calJac3.chr2 159744 0 - 204313951 C a score=78448.000000 s hg38.chr3_KI270935v1_alt 50447 37 + 197351 ctctagtgccactgggttagggtttccatgacccagc s panTro4.chr3_GL389630_random 14957 37 + 103936 ctctagtgccactgggttagggtttccatgacccagc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697113 37 + 202140232 ctgtagtgccactgggttagggtttctatgacccagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795716 37 + 123690457 ctctactgccgctgggttagggtttccacgacccagc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 16121 37 + 180491593 ctctagtgctgctgggttagggtctccacgatcgagt i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180281182 37 - 181584905 ctctagcgctgctgggttagggtctccacgaccaagc i macFas5.chr6 C 0 I 6467 s papAnu2.chr6 173175388 37 - 174439528 ctctagtgctgctgggttagggtctccccaaccgAGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89616116 37 - 91010382 ctctagcgctgctgggttagggtctccacgaccaagc i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30180112 37 - 42124431 cacttgagttggaggaCTAGTTTTTCTGATTTCCAGG i canFam3.chr34 I 227 C 0 e mm10.chr13 46093351 746 - 120421639 I e calJac3.chr2 159744 0 - 204313951 C a score=8091.000000 s hg38.chr3_KI270935v1_alt 50484 3 + 197351 tgg s panTro4.chr3_GL389630_random 14994 3 + 103936 tgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697150 3 + 202140232 tgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795753 3 + 123690457 tgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 16158 3 + 180491593 tgg i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180287686 3 - 181584905 tga i macFas5.chr6 I 6467 C 0 s papAnu2.chr6 173175425 3 - 174439528 TGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89616153 3 - 91010382 tgg i chlSab2.chr4 C 0 I 6359 s canFam3.chr34 30180149 3 - 42124431 TGA i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e calJac3.chr2 159744 0 - 204313951 C a score=16678.000000 s hg38.chr3_KI270935v1_alt 50487 8 + 197351 tcttggca s panTro4.chr3_GL389630_random 14997 8 + 103936 tcttggca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697153 8 + 202140232 tcttggca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795756 8 + 123690457 tttcggca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 16161 8 + 180491593 tctcggca i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180287689 8 - 181584905 tctcggca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173175428 8 - 174439528 TCTCGGCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89622515 8 - 91010382 tctcggGA i chlSab2.chr4 I 6359 C 0 s canFam3.chr34 30180152 8 - 42124431 TACTGTGA i canFam3.chr34 C 0 C 0 e mm10.chr13 46093351 746 - 120421639 I e calJac3.chr2 159744 0 - 204313951 C a score=1221342.000000 s hg38.chr3_KI270935v1_alt 50495 400 + 197351 --------------gtaaatattgaaaaggaatagatacagttgccattatttacagatataatttccaaaaaatttccagagaataaacggaaaaactaacagaaacaaaacaagaatgtagtaaggtatgtgtataagagatttgtatgtaaaaatcagtagctttgcaatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcgcatttcaaacaaaaaa-tttaaaatgccttgaaataatgtaaccagaaatacgaaaAGATGATATGAAAACGTCGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGCAATTTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTATGTATGAGTCTAAGG s panTro4.chr3_GL389630_random 15005 401 + 103936 --------------gtaaatattgaaaaggaatagatacagttgccattatttacagatataatttccaaaaaatttccagagagtaaacggaaaaactaacagaaacaaaacaagaatgtagtaaggtatgtggataagagatttgtatgtaaaaatcagtagctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCCCATTCACATTTCAAACAAAAAAATTCAAAATGCCTTGAAATAATGTAACCAGAAATACGAAAAGATGATACGAAAACATCGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGCAATTTTTTTCGTTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTATGTATGAGTCTAAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697161 394 + 202140232 --------------gtaaatattgaaaaggaatagatacagttgccattatttacagatataatttcccaaaaacttccagagaagaaactgaaaaact------aacaaaacaagaatgtagtaaggtgtctggataagagatttgtatgtaaaaatcagtggctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATTTCATTCACATTTCGAACAAAAAA-TTAAAAATTCCTTGAAATAATGTGACCAGAAATACGAAAAAAGGATATGAAAACGTGGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGCAATTTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTACAGTGTTACGATTGTGTATGAGTCTAAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120795764 400 + 123690457 --------------GTAAATATTGAAAAGGAATAGATACAGTTGCCATTATTTACAGATATAATTTCCAAAAAATTTCCAGAGAATAAACTGAATAACTAACAGAAACAAAACAAGAATGTagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcaatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacatttcaaacaaaaaa-tttaaaatgccttgaaatactgtaaccagaaatatgaaaaaATGATATGAAAACGTGGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGCAGTTTTTTTCATTTGTTCTTCCTGAAAAACCATGAGGT----TGATGTGCATTACAGTGTTCCAATTATGTATGAGCCTAAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 16169 387 + 180491593 --------------GTAAATATT------------ATACaattgctattatttacagacataatttccaaaaaattcccagagaataaactgaaaaactaacagaaacaaaacaagaatgcagtaaggtgtctggataagatatttgtatctaaaaatcagtagctttgcgatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacatttcaaacaaaaaa-ttaaaaatgccttgaaataatgtaaccagaaatac-aagaaaggatatgaaaacgtggctgctaaaggacatgaaagaATG-------TAA----TACTAG----ATTCTGAGATGCAACTTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCCAAGG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180287697 399 - 181584905 --------------gtaaatattgaaaaggaatcaatacaattgctattatttacagatgtaatttccaaaaaattcccagagaataaactgaaaaattaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttgtatctaaaaatcagtagctttgcaatgtgccagcagtaaTCTGCTCAGACATCAGTAAAT-ATCTCATTCACATTTTAAACAAAAAA-TTAAAAATGCCTTGAAATAATGTAACCAGAAATAC-AAGAAAGGATATGAAAACGTGGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGCAACTTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173175436 399 - 174439528 --------------GTAAATATTGAAAAGGAATCGGTACAATAGCTATTATTTACAGATGTAATTTCCAAAAAATTCCCAgagaataaactgaaaaattaacagaaacaaaacaagaatgcaGTAAGGTGTCTGGATAAGAGATTTGTATCTAAAAATCAGTAGCTTTGCGATGTGCCAGCAGTAATCTGCTCAGACATCAGTAAAT-ATCTCattcacattttaaacaaaaaa-ttaaaaatgccttGAAATAATGTAACCAGAAATAC-AAGAAAGGATATGAAAACGTGGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTCTGAGATGcaacttttttcatttgttcttcctGAAAAACCATTAGGT----TGATGTGCATTACAGTGTCATGATTATGTATGAGTCTAAGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89622523 399 - 91010382 --------------GTAAATattgaaaaggaatcaatacaattgctattatttacagatgtaatttccaaaaaattcccagagaataaactgaaaaattaacagaaacaaaacaagaatgcagtaaggtgtctggataagagatttatatctaaaaatcagtagctttgtgatgtgccagcagtaatctgctcagacatcagtaaat-atctcattcacattttaaacaaaaaa-ttaaaaatgccttgaaataatgtaaccagaaatac-aagaAAGGATATGAAAACGTGGCTGCTAAAGGACATGAAAGAATG-------TAA----TACTAG----ATTTTGAGATGCAACTTTTTTCATTTGTTCTTCCTGAAAAACCATTAGGT----TGATGTGCATTGCAGTGTCATGATTATGTATGAGTCTAAGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 159744 401 - 204313951 --------------gtaaatattgaaaaggaatagatataattgctattatttacagacacaatttccaaaaagttcccagagaataaattgaaaaactaatagaaacaaaagaaggatgtaggtaggtgtctggatgaaaggtttgtagctaaacctcagtagcttttcaatgtgccagcaggaatccgctcagacgtcagtaaat-atctcattcacctttcagacaaaaaa-caaaaaatgccttgaataaatataaccagaaatacgtaaaacagatatG-AAACATC-CTGCTAAAGTGTGTTTAAGAATG-------TGA----TACTTACTGCCTTCTAAGATGCAA-GTGTTGCGTTTGTTCTTCCTGAAGAACCATTAGGT----TGATGTGCATTACCGTGTTACAGTTATGTGTCAGTCTAAGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30180160 384 - 42124431 GTGATAGAAATCAGTTACGTattgaaaaggagtgg--acaagtatcattacttacagatacaatt----aaaaatctcaaggcaataag-tgagaaactcata-----aaaacaagaatg----gagatatctgtataaaagattcaaa----------agtagctttccaacatgcctgcaataatc--------cattagaaaatcatctcattcacagtgcagaccaaaag-tttaaaatgccttgaataaacctaaccctaaagag----------tatgaaaagatgagcactgaagaatataaaagaatgttTTAACTAACATTTACTAG----ATTCTAAGAT--AGTTTTTTCCATTTCCTTATCCTGAAAGGCCAGAACATTTGATAGCGTGCATTACAATTTTAAACTTATGTATCATTGTgggg i canFam3.chr34 C 0 I 3374 e mm10.chr13 46093351 746 - 120421639 I a score=528436.000000 s hg38.chr3_KI270935v1_alt 50895 179 + 197351 AAAATCAGATGAAATGTCCAAATTGAACCACGAAGGTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGCCTGTGTGTCCCACAGGAAGCAAAAGCTGATGCCCAGTTCCCAGCATACCTA s panTro4.chr3_GL389630_random 15406 179 + 103936 AAAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAATTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTACCTGTGTGTCCCACAGGAAGCAAAAGCTGATGCCCAGTTCCCAGCATACCTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697555 179 + 202140232 AAAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAATTAGAGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGCCTGTCTGTCTGACTGGAAGCAAAAGCTGATGCCCAGTTCCTAGCATACCTA i ponAbe2.chr3 C 0 I 1 s nomLeu3.chr11 120796164 179 + 123690457 AGAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAGACAGTTAGGGTCAGTGGAGCAAAGCACAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTACCTGTCTGTCCCACAGGAAGCAAAAGCTGACACCCAGTTCCCAGCATACCTA i nomLeu3.chr11 C 0 I 1 s rheMac3.chr6 16556 179 + 180491593 AAAATCAGATGAAATGTCCAAATTAAACCATGAAAGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i rheMac3.chr6 C 0 I 1 s macFas5.chr6 180288096 179 - 181584905 AAAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCAGTTGCCAGCACACCTA i macFas5.chr6 C 0 I 3493 s papAnu2.chr6 173175835 179 - 174439528 AAAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAGGAAACAATTAGGGTCAGTGGAGCAAAGCAGAGTTAGAGGGAGaagc------aaggaggaggagggatcACGGAGGTGGTATCTGTCTGTCCCACAGGAAGCAAAAGCTGACGCCCGGTTGCCAGCACACCTA i papAnu2.chr6 C 0 I 1 s chlSab2.chr4 89622922 179 - 91010382 AAAATCAGATGAAATGTCCAAATTAAACCATGAAGGTGCATTGGTAGAGGAAGAAACAATTAGGGTCAGGGGAGCAAAGCAGAGTTAGAGGGAGAAGC------AAGGAGGAGGAGGGATCACGGAGGTGGTGTCTGTCTGTCCCACAGGAAGCAACAGCTGACGCCCGGTTGCCAGCACACCTA i chlSab2.chr4 C 0 I 1 s calJac3.chr2 160145 172 - 204313951 GAAATCAG-------------ATTCAACCATGAAGCTGCATTTGCAGAGGAAGAGACAATTAGGGTCAGAGGAACAAAGCAGAGTTAGAGGGAGAAGCGAGGAGGAGGAGGAGGAGGGATCAGGGAAGTGGTGCCCCTCCGTCCCACAGGAAGCAAACGCTGACACCTAGTTCCCAGCATACCTA i calJac3.chr2 C 0 I 1 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30180544 3374 - 42124431 I a score=1106069.000000 s hg38.chr3_KI270935v1_alt 51074 399 + 197351 AGTAAACTTCAGGTCCACT------CCTAGCAC-------------------------------------GTTTCTCGTGATAGTAAAACTATGAAGGAACTCAGTGTACAAGGAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCCTTGAAGACCTTCGGTTCCAACCCCACCATCAGCAGGGCTCTGCTCAGTTCCTCCTTGTGTGTATCACCACAGGGCTGCTGGCTCGTGTCACGTTCACCACCAGACCCCACATCAGGAGTC----------------CCGCCAGGGG-TGT-GGGGAGGCAGTGCTGCCTGGTTGGCCGTGGAGCCGTATGGAACGTGGTGCCTCACAGGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCCCGCTGGAAAGGATGTGTGTGGGTCTAAG s panTro4.chr3_GL389630_random 15585 399 + 103936 AGTAAACTTCAGGTCCACT------CCTAGCAC-------------------------------------GTTTCTCGTGATAGTAAAACTATGAAGGAACTCAGTGTACAAGGAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCCTTGAAGACCTTCGGTTCCAACCCCACCATCAGCAGGGCTCTGCTCAGTTCCTCCTTGTGTGTATCACCACAGGGCTGCTGGCTCGTGTCACGTTGACCACCAGACCCCACGTCAGGAGTC----------------CCGCCAGGGG-TGT-GGGGAGGCAGCGCTGCCTGGTTGGCCGCGGAGCCCTATGGAACGTGGTGCCTCACAGGCAGTCTGCTTGGCGTCCTGGACCCTGGCTGTATCCCGCTGGAAAGGATGTGTGTGGGTCTAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199697735 399 + 202140232 AGTAAACTTCAGTTCCACT-----GCATAGCAC-------------------------------------GTTTCTAGTCATGGTAAAACTATGAAGGAACTCAGTGTACAAGGAGCTTCTACAAAATAGGCAGAAGATACTAGTCAGATGGGCCAAGGGCCCCAGCCACCAACG-CCCTCCCTCTCCTTGTAGACCTTCGGTTCCAACCCCACCATCAGCAGGGCTCTGTTCAGCTCCTCCTTGTGTGTGTCACCACAGGGCTGCTGGCTCGTGTCACGTTGACCACCAGACCCCACGTCAGGCGTC----------------CCGCCAGGGG-TGT-GGGGAGGCAGTGCTGCCTGGTTGGCTGTGGAGCCGTATGGAACATGGTGCCTCACAGGCAGTCTGCTTGGAGTCCTGGACCCTGGCTGTATCCCGCTGGAAAGGATGTGTGTGGGTCTAAG i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 120796344 401 + 123690457 AGTAAACTTCAGGTCCACT-----GCATAGCAC-------------------------------------GTTTCTCACCACAGTAAAACTATGAAGGAACTCAGTATACAAGGAGCTTCTACAAAATAGGCAAAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCCTTGAAGACCTTCCGCTCCAACCCCACCATCAGCAGGGCTCTGCTCAGCTCCTCCTAGTGTGTATCACCACAGGGCTGCTGGCTCGTGTCACGTTGACCACCAGACCCCATGTCAGGAGTC----------------CCACCAGGGGTTGT-GGGGAGGCAGCGCTGCCTGGTTGGCCACTGAGCCGTATGGAACATGGTGCCTCACAGGCAGTCTGCTTGGAGTCCTGGACCCCGGCTGTATCCCGCTGGAAAGGATGTGTGTGGGTCTAAG i nomLeu3.chr11 I 1 C 0 s rheMac3.chr6 16736 400 + 180491593 AGTAAACTTCAGGTCCACT-----GCATGGCAC-------------------------------------GTTTCTTGCCACAGTAAAACTATGAAGGAAGTCAGTGTATAAGAAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCACTGAAGACCTTTGGCTCCAACCCCACCATCACCAGGGCTCTGCTCAGCTCCTCCTAGTGTGTGTCACCACAGGGCTGCTGGCTTGTGTCACGTTCACCACCAGACCCCACGTCAGGAGTC----------------CCGCCAGGGG-CGT-GGGGAGGCAGCGTTTCCTGCTTGGCCGCAGAGCCATGTGGAACATGGTACCTCACAGGCAGTCTGCTTGGAGTCCTGGAGCCTGGCTGTATCCCACTGGAAAGGATGTGTCTGGGTCTAAG i rheMac3.chr6 I 1 C 0 s macFas5.chr6 180291768 400 - 181584905 AGTAAACTTCAGGTCCACT-----GCATGGCAC-------------------------------------GTTTCTTGCCACAGTAAAACTATGAAGGAAGTCAGTGTATAAGAAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCACTGAAGACCTTTGGCTCCAACCCCACCATCACCAGGGCTCTGCTCAGCTCCTCCTAGTGTGTGTCACCACAGGGCTGCTGGCTTGTGTCACGTTCACCACCAGACCCCACGTCAGGAGTC----------------CCGCCAGGGG-TGT-GGGGAGGCAGCACTGCCTGGTTGGCCGCAGAGCCATGTGGAACATGGTACCTCACAGGCAGTCTGCTTGGAGTCCTGGACCCTGGCTGTATCCCACTGGAAAGGATGTGTCTGGGTCTAAG i macFas5.chr6 I 3493 C 0 s papAnu2.chr6 173176015 400 - 174439528 AGTAAACTTCAGGTCCACT-----GCATGGCAT-------------------------------------GTTTCTCGCCACAGTAAAACTATGAAGGAAGTCAGTGTACAAGAAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCACTGAAGACCTTCGGCTCCAACCCCACCATCACCAGGGCTCTGCTCAGCTCCTCCTAGTGTGTGTCACCACAGGGCTGCTGGCTTGTGTCACGTTCACCACCAGACCCCACGTCAGGAGTC----------------CCGCCAGGGG-TGT-GGGGAGGCAGCGTTTCCTGCTTGGCCGCAGAGCCATGTCGAACATGGTACCTCACAGGCAGTCTGCTTGGAGTCCTGGAGCCTGGCTGTATCCCACTGGAAAGGATGTGTCTGGGTCTAAG i papAnu2.chr6 I 1 C 0 s chlSab2.chr4 89623102 401 - 91010382 AGTAAACTTCGGGTCCACT-----GCATGGCAC-------------------------------------GTTTCTCGCCACAGTAAAACTATGAAAGAAGTCAGTGTACAAGAAGCTTCTACAAAATAGGCAGAAGACAGTAGCCAGATGGGCCAAGGGCCCCAGCCACCCACGCCCCTCCCTCTCACTAAAGACCTTCGGCTCCAACCCCACTATCACCAGGGCTCTGCTCAGCTCCTCCTAGTTTGTGTCACCACAGGGCTGCTTTCTTGTGTCACGTTCACCACCAGACCCCACGTCAGGAGTC----------------CCGCCAGGGG-TGTGGGGGAGGCAGCATTGCCTGGTTGGCCGCGGAGCCATGTGGAACATGGTGCCTCACAGGCAGTCTGCTTGGAGTCCTGGAGCCTGGCTGTATCCCACTGGAAAGGATGTGTCTGGGTCTAAG i chlSab2.chr4 I 1 C 0 s calJac3.chr2 160318 417 - 204313951 AAAAAACTTCAGATCTGCCTACAAACATTTCATCCAGCCACGTACCTACACCCTTATTTTGTTTCTCTTAGTTCCTCATCACTGTAAAACTGTGATGGACCCCAGTGTACGAGGAGCCTTTGCAAAACAGGCCGAAGACAGTAGCTAGATGGGCCAAGGGTCCCAGCCACCCACG-CCCTCCCTCTCCTTGAAGACCTTTGGCTCCTACACCACCATCATCAGCACCCTGCTCAG---CTCCTAGTGTGTATCACCA-------------------CACATTCACCACCAGACCCCACGTCAGGAGTCCCATCTGGTCCCGTGTCCACCAGGGG-TGT--GGGAGGGGGTGCTGGCTGGCTGGCCGCAGAGCCATATGGAACATGGCACCTCACAGGCAGTCTG-----------------TGGCTGTATCCCGCTGGAAAGCATGCATGTGGGTCTAAG i calJac3.chr2 I 1 C 0 e mm10.chr13 46093351 746 - 120421639 I e canFam3.chr34 30180544 3374 - 42124431 I a score=295772.000000 s hg38.chr3_KI270935v1_alt 51473 106 + 197351 ATATGTATATAATAGAAACA----TTTATTCAGAAGCTTTAGTCAAGACTTCATTTTTAAGTTCAGAGTAATAAACTCATAGTCTAAATTTCCTAATTTTTCTGTTTAAT s panTro4.chr3_GL389630_random 15984 106 + 103936 ATGTGTATATAATAGAAACA----CTTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCATAGTCTAAATTTCCTAATTTTTCTGTTTAAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199698134 109 + 202140232 ATATGTATGTAATAGAAACA-TTGTTTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCACAGTCTGAATTTCCTAATTTTCCTGTTTAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120796745 110 + 123690457 ATATGTATGTAATAGAAACATTTATTTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAATTCAGAGTAATAAACTCAAAGTCTATATTTCCTAATTTTTCTGTTTAAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 17136 102 + 180491593 ATGTGTATGTAATAGAAACA-----GTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCA---TCTGAATTTCCTAATTTTTCTGTTTAAT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180292168 105 - 181584905 ATGTGTATGTAATAGAAACA-----GTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCATAGTCTGAATTTCCTAATTTTTCTGTTTAAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173176415 103 - 174439528 ATGTGTATGTAATAGAAACA----TGTATTCAGAAGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCA---TCtgaatttcctaatttttctatttaat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89623503 102 - 91010382 ATGTGTATGTAACAGAAACA----TGTATTCAG-AGCTTTAGTCAAAACTTCATTTTTAAGTTCAGAGTAATAAACTCA---TCTGAATTTCCTAATTTTTCTATTTAAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 160735 103 - 204313951 ACGTGTAGTTAATAGAAACA------TTTTCAGAAGCGTTAGTCAGAACTTCATTTTTAAGTTCAGAGTAATGAACTCATAGTCTGAGTTTCCTCATTGTTCT-TTTAAT i calJac3.chr2 C 0 C 0 s mm10.chr13 46094097 87 - 120421639 ATGCATATATAATAAGACCC----TTTCTCCAAGA-----AAAAAGAATTACA---TTAAGTTTAAAT---TTAACTCATAGTCTGAATTTCCTA--------GTTTAAG i mm10.chr13 I 746 C 0 e canFam3.chr34 30180544 3374 - 42124431 I a score=638065.000000 s hg38.chr3_KI270935v1_alt 51579 174 + 197351 TTACATAAA-------T-AAAATGAAATGCAAAACAACAG----GTCTAAAAGTTAAGCAGTTCTTGGTATGGCTGCTTC-TATGAATTAAAAGTTTACAAATAATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCA s panTro4.chr3_GL389630_random 16090 174 + 103936 TTACATAAA-------T-AAAATGAAATGCAAAACAACAG----GTCTAAAAGTTAAGCAGTTCTTGGTATGGCTGCTTC-TATGCATTAAAAGTTTACAAATAATATTTTGTGCCACAGTCAACGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCTTGTTGCAAGAAGGTTGTGGGAAAATCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199698243 174 + 202140232 TTACATAAA-------T-AAAATGAAATGCAAAACAACAG----GTCTGAAAGTTAAGCAGTTCTTGGTACGGCTGCTTC-TATGGCTTAAAAGTTTACAAATAATATTTTGTGCCACAGTCAATGTAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120796855 174 + 123690457 TTACATAAA-------T-AAAATGAAATGCAAAACAACAG----GTCTACAAGTTAAGCAGTTCTTGGTATGGCTGCTTC-TATGGATTAAAAGTTTATGAATAATATTTTGTGCCACAGTCAGTGCAAAATCGTGCTGCTGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 17238 180 + 180491593 TTACGTAACTT-----T-TAAATGAAATGCAAAACAACAGTTAAGTCTAAAAGTTAAGCAGTTCTTGGTGTGGCTGCTTC-TATGAATTAAAAGTTTACCAATAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180292273 180 - 181584905 TTACGTAACTT-----T-TAAATGAAATGCAAAACAACAGTTAAGTCTAAAAGTTAAGCAGTTCTTGGTGTGGCTGCTTC-TATGAATTAAAAGTTTACCAATAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173176518 173 - 174439528 ttacaTAGC-------------TGAAATGCAAAACAACAGTTAAGTCTAAAAGTTAAGCAGTTCTTGGTGTGGCTATTTG-TATGGATTAAAAGTTTACCAATAATATTTTGTGTCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCGAGAAGGTTGTGGGAAAATCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89623605 178 - 91010382 TTACATAAC-------T-CAGCTGAAATGCAAAACAACAGTTAAGTCTAAAAGTTAAGCAGTTCTTGGTGTGGCTGCTTC-TATGGATTAAAAGTTTACCAATAATATTTTGTGCCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGCGTGTTGCAAGAAGGTTGTGGGAAAATCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 160838 181 - 204313951 TTACATAACTTTTAAAT-AAAATGAAATGCAAAACAACAG----GTCTCAAAGTTAAGCAGTTCTTGGTATGGCTGCTTC-TATGGATTAAAAGTTTACAAACGCTATTTTGTGCCACAGTCAATGCAAAATCATGCTGCCGTGTTCCGTGTGGGAAGTGTGCTGCAAGAAGGTTGCGAGAAAATCA i calJac3.chr2 C 0 M 577 s mm10.chr13 46094184 164 - 120421639 TTGTATAAA-------T--ATATCAAATGTAGAA-AATAT---------TAAGTTGTATGAGTTTTTACCTATCTTTTTC-TGTGCATTAAAAATTTGT-AATGGTGTTTTATG--ATAGTCGATGCAGAACCATGCTGCAGTGTTCCGTGTGGGGAGTGTATTGCAAGAAGGCTGTGAAAAAATCA i mm10.chr13 C 0 C 0 s canFam3.chr34 30183918 177 - 42124431 ttaaaaaaa-------TAAAAATGAAATGCGTAAGAAAAA---AGCTAAAGGGTTTACCAGTTTTAGTCCTAGCTGCTTCATGTGAATTAAAGATTGACAAATGGTATTTTATGTTCCAGTCGATGCAGAGTCATGCTGCTGTGTTCCGTGTGGGAAGTGTGTTACAGGAAGGCTGTGAGAAAATCA i canFam3.chr34 I 3374 C 0 a score=793231.000000 s hg38.chr3_KI270935v1_alt 51753 301 + 197351 GCAAGCTCTATGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTGGGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTCTGTCCC-GTCAGTGCTGACTTAGTTCCATGCTTGCTGTCTGGATGGGTGCTGGCCCCCAGCTGTAAAGCCACAACCAGTGACTCCATGGACTAGCAGGCCCAGGCTGACAGCTCGGAGGGCCCGTGTGACTGGGTCCCACCTGCCCCTGATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT s panTro4.chr3_GL389630_random 16264 298 + 103936 ---AGCTCTACGGAGACCTGAAGCATCTGAAGACGTTTGACCGGGGTGAGCAG-----ACAGTGGGCTCTGTGCACACTGTTGGGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTCTGTCCC-GTCAGTGCTGACTTAGTTCCATGCTTACTGTCTGGATGGGTGCTGGCCCTCAGCTGTAAAGCCACAACCAGTGACTCCATGGACTAGCAGGCCCAGGCTGACAGCTCGGAGGGCCCGTGTGACTGGGTCCCGCCTGCCCCTGATGGAAGTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199698417 301 + 202140232 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGATGTTTGACCGGGGTGAGCAG-----ACAGCAGGCTGTGTGCACAATGTTGGGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTCTGTCCC-ATCAGTGCTCACTTAGTTCCATGCTTGCTGTCTGGATGGGTCCTGGCCCTCAGCTATAAAGCCACAACCAGTGACTCCATGGACTAGCAGGCCCAGGCTGACAGCTCGGAGGGCCCATGTGACTGTGTCCCACCTGCCCCTGATGGAACTTTTTGTGTTCCCAGGAATGGTCTGGAACACAGACCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120797029 297 + 123690457 ---AGCTCTGCAGAGACCTGAAGGACCTGAAGACGTTCAGTCGGGGCGAGCAG-----ACAGCAGGCTCCGTGCACACTGTTGGGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTCTGTCCC-GTCAGTGCTGACTTAGTTCCATGCTTGCTGTCTGGATGGGTCCTGGCCCTCAGCTATAAAGCCACAACCAGTGACTCCATGGACTAGCAGGCCCAGGCTGACATCTCGGAGGGCCCATGTGGCTGGGTCCTGCCTGCCCC-GATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 17418 293 + 180491593 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTGGGC--CCTGCCTTCTGTAGGGTGGGCTG----------GTGTCTGTGCC-GTCAGTGCTGACTTAGTTCCATGCTTGCTGTCCGGAT----------CCACAGCCATAAAGCCACAACCAGTGGCTCCACGGACTAGCAGGCCCAGGCTGACAGCTCAGAAGGCCCCTGTGAC-GGGTCCCGCCTGCCCCTGATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180292453 293 - 181584905 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTGGGC--CCTGCCTTCTGTAGGGTGGGCTG----------GTGTCTGTGCC-GTCAGTGCTGCCTTAGTTCCATGCTTGCTGTCCGGAT----------CCACAGCCATAAAGCCACAACCAGTGGCTCCACGGACTAGCAGGCCCAGGCTGACAGCTCAGAAGGCCCCTGTGAC-GGGTCCCGCCTGCCCCTGATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173176691 305 - 174439528 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTGCACAGTGTTGGGC--CTTGCCTTCTGTAGGGTGGGCTG----------GTGTCTGTGCC-GTCAGTGCTGACTTAGTTCCATGCTTGCTGTCCGGATGGGTCCTGGCCCACAGCCATAAAGCCATAACCAGTGGCTCCACGGACTAGCAGGCCCAGGCTGACAGCTCAGAAGGCCCCTGTAAC-GGGTCCCGCCTGCCCCTGATGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89623783 304 - 91010382 GCAAGCTCTACGGAGACCTGAAGCACCTGAAGACGTTTGACCGGGGTGAGCAGACAGCACAGCGGGCTCTGTG--CAGTGTTGGGC--CCTGCCTTCTGCAGGGTGGGCTG----------GTGTCTGTGCT-GTCAGTGCTGACTTAGTTCCATGCTTGCTGTCCGGATGGGTCCTGGCCCACAGCCATAAAGCCATAACCAGTGGCTACACGGACTAGCAGGCCCAGGCGGACAGCTCAGAAGGCCCCTGTGACTGGGCCCCGCCTGCCCCTGGTGGAACTTTTTGTGTCCCCAGGAATGGTCTGGAACACGGACCT i chlSab2.chr4 C 0 C 0 s mm10.chr13 46094348 256 - 120421639 GTCAGCTCTATGGAGACCTAAAGCATCTAAAGACATTCGACAGGGGTGAGTCA-----GCAGTACTCTCAGAG----------GAT--ACTGCCTTCCTTGGGATAGGTTG----------GTATCTGTCCCTTTTACCACTACCTTAG-TCCATGCCTGCTGTCCAGCC-ATCTCTTCCCCACAGCTGTA-----------TGTTGCTTTATG-----------------------TCCAGAGTACCTACATGACTGGGTCCTATTTGTCTCTCATTGGTTCTTGTGTATCCCCAGGAATGGTTTGGAACACAGACCT i mm10.chr13 C 0 C 0 s canFam3.chr34 30184095 234 - 42124431 GCCAGCTCTATGGAGACCTAAAGCATCTGAAGACATTTGACCGAGGTGAGCAT----TCCATGGGGCCCTGCA--CACAGTTGGGCTGCTGGATATTTGCAAGACAGACTGCCTCAGAGCCCTGTCTGTCCC----AGTGCGGAATTCACTCT-------------------------GCCCACAGCTG---------------------------------------------CAGCCTGGAGGACCCAGTTAACTGGATCCTATCT---CATGA--GTACTCGGTGTGTCCCTAGGAATGGTCTGGAACACCGACCT i canFam3.chr34 C 0 C 0 e calJac3.chr2 161019 577 - 204313951 M a score=1170153.000000 s hg38.chr3_KI270935v1_alt 52054 312 + 197351 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTATGTGCGCTGCAGACCGTCAATGGAGCAGAGGCGGGGAAGGAGTCACGGGGCGCGCACGCCGGGGAAGACTACAAGGTGCGCCTTCTCGCCACGC---CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATGTCGTTTCCCCAAAAGTATATC--CAAAAAATGCCTTTTTCCC--------------TCTGGTAACTTTGATCCCTGGGTTCTCGCCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC s panTro4.chr3_GL389630_random 16562 312 + 103936 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCGTCAGTGGAGCAGAGGCGTGGAAGGAGTCACGGGGCGCGCACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACGC---CCACCTGCACCTGCCTTTTCCTCCCGCCTGGTGGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATGTCGTTTCCCCAAAAGTAAATC--CAAAAAATGCCTTTTTCCC--------------CCTGGTAACTTTGATCCCTGGGTTCTCGCCATTTTCTGGATCACTGTGACCTGTTCCTTGCTTTGGGTCGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199698718 312 + 202140232 GGTGGAGAACCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCAATGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGTGCACGCCAGGGAAGAATACAAGGTGAGCCTTCTCTCCACGC---CCACCAGCACCTGCCTTTTCCTCCTGCCTGGTGGCACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATTTCATTTCCCCAAAAGTAAATC--CAAAACATGCCTTTTTCCC--------------CCTGGTAACTTTGATCTCTGGGTTCTCACCATTTTCTGGACCACTGTGACCTTTTCCTTGCTTTTGGTCGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120797326 311 + 123690457 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCCGCAGACCATCAGTGGAGCAGAGGCGTGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCACCACAC---CCACCTGCACCTGCCTTTTCCTCCCACCTGGGTGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATTTCGTTTCCCCAAAAGTAAATC--CAAAAAATGCTTTCTTCCC--------------CCTGGTAACTTTGATCCCTGGGTTCTCGCCATCTTCTGGATCACTGCAACCT-TTCCTTGCTTTGGGTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 17711 312 + 180491593 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC---CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATTTCATTTCCCCAAAAGTAAATC--CAAAAAACGCCTTTTTCCC--------------CCTGGTAACTCTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCTTTTCCTTGCTTTGGGTCAGC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180292746 312 - 181584905 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC---CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATTTCATTTCCCCAAAAGTAAATC--CAAAAAACGCCTTTTTCCC--------------CCTGGTAACTTTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCTTTTCCTTGCTTTAGGTCACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173176996 312 - 174439528 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTATGGAGCAGAGGCGCGGAAGGAGTCATGGGGCGCACACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC---CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCA-GCCCC-ACCTCTGcattttctctgcattttatttcatttccccaAAAGTAAATC--CAAAAAACGCCTTTTTCCC--------------CCTGGTAACTTTGATCCCTGGGTTCCCGCCATCCTCTGGATCACTGTGACCTTTTCCTTGCTTTGGGTCAGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624087 312 - 91010382 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCACGGGGCGCCCACGCCAGGGAAGACTACAAGGTGCGCCTTCTCGCCACAC---CCACCTGCACCTGCCTTTTCCTCCCACCTGGTGGGACTCA-GCCCC-ACCCCTGCATTTTCTCTGCATTTTATTTCATTTCCCCAACAGTAAATC--CAAAAAATGCCTTTTTCCC--------------CCTGGTAACTTTGATCCCTGGGTTCCCACCATCCTCTGGATCACTGTGACCTTTTTCTTGCTTTGGGTCAGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161596 292 - 204313951 GGTGGAGACCCTGGAGCTGCAGAACCTGATGCTGTGTGCGCTGCAGACCATCTACGGAGCAGAGGCGCGGAAGGAGTCGCGGGGCGCGCACGCCAGAGAAGACTACAAGGTGCGCCTTCTGGCCACAC---CCACCTGCACCTGCCGCTTTCTCCCATCTTGTGTGACTCA-ACCCC-ACCCCTGCATTTTCTCTGCATTTCATTCCATTTCCCCAAAAGTAAATC--CAGAAAGTGCCTTTTCCCC--------------CT------------------GGTTCTCGCCGTCTTCTGCAACACTG--ACCTTTGCTTTGCCTTGGGTCAGT i calJac3.chr2 M 577 C 0 s mm10.chr13 46094604 281 - 120421639 GGTGGAGACCCTGGAGCTGCAGAATCTGATGCTGTGCGCACTGCAGACCATATATGGTGCAGAAGCTCGGAAGGAGTCCCGGGGAGCCCATGCCAGGGAAGATTACAAAGTATGTCT-----CCAGATGCGCCACCTTGACCTGACGTTGC-------------GCACCCAGGTCTC-ATCCCTGCTTGCTTTCTGTGCTTCATTT-ATTTTCCCAAAACAAAATC--AAGGAGAACACTTTTTCCT--------------TC-AATATCTTTTAT-------------TCATATTCTTACTCTCAG--ACCTTTTTCTTGTTTTGAGTTAGC i mm10.chr13 C 0 I 1716 s canFam3.chr34 30184329 328 - 42124431 GGTAGAGACCCTGGAGCTGCAGAACCTGATGCTCTGTGCACTTCAGACCATTTATGGAGCAGAGGCCCGGAAGGAGTCACGTGGCGCTCACGCCAGGGAAGATTACAAGGTGTGCCCTGACCACGTAC---CCCTGTGCACATCATGCCTTCTGTCCACTGGCATTGCTCA-GCCCCTATCCCTGCATTTTCTCTACATTTCACTTCATTTTCCCACGAGTAAATTGAAAAAAAATGCCtttttttttttttttttttttGCCTGATAACTTTCATGCTTTGG-TATCACTGTGTTTAGTATCAGCATGACCTTTTTCTTGCCTCAGATCGGC i canFam3.chr34 C 0 C 0 a score=206751.000000 s hg38.chr3_KI270935v1_alt 52366 65 + 197351 ATCCACTGATGCCAGCAGTGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGGTTAG s panTro4.chr3_GL389630_random 16874 65 + 103936 ATCCACTGATGCCAGCAGTGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGGTTAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699030 65 + 202140232 ATCCACTGATGCCAGCAGTGGCATCTCCAAGCCAGTGTGCTTTGCTGTTAGAAGGCCAAGATTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120797637 65 + 123690457 GTCCACTGATGCCAGCAGTGGCATCTCCAAGCCAATGTGATTTGCTGTTAGAAGGCCAAGGTTAG i nomLeu3.chr11 C 0 I 302 s rheMac3.chr6 18023 65 + 180491593 GTCCACTGATGGCAGCAGTGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGTTTAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293058 65 - 181584905 GTCCACTGATGGCAGCAGTGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGTTTAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177308 65 - 174439528 GTCCGCTGATGGCAGCAGTGGCATCTCCAAGCCAATGCGCTTTGCTGTTAGAAGGCCAAGTTTAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624399 65 - 91010382 GTCCACTGATAGCAGCAGTGGCATCTCCAAGCCAATGTGCTTTGCTGTTAGAAGGCCAAGGTTAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161888 65 - 204313951 GGCCACTGATGCCAGCAGTGGCATCTCCAAGCCAAAGTGCTCTGCAGTTAGAGGGCCAAGGTTAG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30184657 64 - 42124431 ATTTGCTGCTGCCAGTAGGAGCATCTCTAAGCAAAACACACCTGACTTACCAGATCAAAGATTA- i canFam3.chr34 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I a score=79442.000000 s hg38.chr3_KI270935v1_alt 52431 24 + 197351 AAGTGCAGCCAGCGTGGCATGACC s panTro4.chr3_GL389630_random 16939 24 + 103936 AAGTGCAGCCAGCATGGCATGACC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699095 24 + 202140232 AAGTGCAGCCAGAGTGGCATGACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798004 24 + 123690457 aaGTGCAGCCAGAGTGTCATGACC i nomLeu3.chr11 I 302 C 0 s rheMac3.chr6 18088 24 + 180491593 AAGTGCAGCCAGAGTGGCATGACC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293123 24 - 181584905 AAGTGCAGCCAGAGTGGCATGACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177373 24 - 174439528 AAGTGCAGCCAGAGTGGCATGACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624464 24 - 91010382 AAGTGCAGCCAGAGTGGCATGACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161953 24 - 204313951 CAGTGCAGCCGGAGTAGCATGGCC i calJac3.chr2 C 0 C 0 s canFam3.chr34 30184721 24 - 42124431 GTATGCAGTCTGAGTACTATAGCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I a score=139713.000000 s hg38.chr3_KI270935v1_alt 52455 57 + 197351 AGGAAATAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCT s panTro4.chr3_GL389630_random 16963 57 + 103936 AGGAAATAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699119 56 + 202140232 AGGAAATAAATGCCAGTTTATTAAATAATGAGTAAGCCACCGTTTCGAACCTG-CCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798028 57 + 123690457 AGGAAGTAAATGCCAGTTTATTAAATAATGAGTAAGCCACCATTTCAAACCTGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18112 57 + 180491593 AGGAAATAAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCAAATGTGCCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293147 57 - 181584905 AGGAAATAAATGCCAGTTTATTAAATAACGAGTAAGCTACCGTTTCAGACCTGCCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177397 57 - 174439528 AGGAAATAAATGCCAGTTTATTAAATAACGATTAAGCCACCGTTTCAAACCTGCCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624488 57 - 91010382 AGGAAATAAATGCCAGTTTATTTAATAACGGGTAAGCCACCGTTTCAAACCTGCCCT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30184745 46 - 42124431 AGAAAATA-----------GTAAAATGAGAGATAAATCATTATTTGAGACCTGACTT i canFam3.chr34 C 0 I 134 e mm10.chr13 46094885 1716 - 120421639 I e calJac3.chr2 161977 0 - 204313951 C a score=107107.000000 s hg38.chr3_KI270935v1_alt 52512 47 + 197351 ATGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA s panTro4.chr3_GL389630_random 17020 47 + 103936 GTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699175 43 + 202140232 GTGGAGGAAATGCCAGTTTAT----TAATGAGCAAGTCACTGTTTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798085 47 + 123690457 GTGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i nomLeu3.chr11 C 0 T 102 s rheMac3.chr6 18169 47 + 180491593 AAGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293204 47 - 181584905 AAGGAGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177454 47 - 174439528 AAGGAGGAAATGCCAGTTTATTAAATAAGGAGTAAGCCACCGTTTCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624545 47 - 91010382 AAGGAGGAAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCA i chlSab2.chr4 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C a score=12786.000000 s hg38.chr3_KI270935v1_alt 52559 9 + 197351 AGCCTGCCC s panTro4.chr3_GL389630_random 17067 9 + 103936 AGCCTGGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699218 9 + 202140232 GGGCTGCCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 18216 9 + 180491593 GACCTGCCC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293251 9 - 181584905 GACCTGCCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177501 9 - 174439528 AACCTGCCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624592 9 - 91010382 GACCTGCCC i chlSab2.chr4 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C e nomLeu3.chr11 120798132 102 + 123690457 T a score=1480.000000 s hg38.chr3_KI270935v1_alt 52568 3 + 197351 TGT s panTro4.chr3_GL389630_random 17076 3 + 103936 TGT i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chr6 18225 3 + 180491593 TGT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293260 3 - 181584905 TGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177510 3 - 174439528 GAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624601 3 - 91010382 TGT i chlSab2.chr4 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C e ponAbe2.chr3 199699227 0 + 202140232 C e nomLeu3.chr11 120798132 102 + 123690457 T a score=171182.000000 s hg38.chr3_KI270935v1_alt 52571 102 + 197351 GGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA s panTro4.chr3_GL389630_random 17079 91 + 103936 GGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAAGCCTGCCCTGTGGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAG----------- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120798030 102 + 123690457 GAAGTAAAT-GCCAGTTTATTAAATAATGAGTAAGCCACCATTTCAAACCTGCCCTGTGGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i nomLeu3.chr11 T 102 C 0 s rheMac3.chr6 18228 102 + 180491593 GGAGGAAAT-GCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCAGACCTGCCCTGTGGAGGAAAT-GCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293263 102 - 181584905 GGAAGAAAT-GCCAGTTTATTAAACAACGAGTAAGCCACCGTTTCAGACCTGCCCTAAGGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177513 104 - 174439528 GGAGGAAATGGCCAGTTTATTAAATAACAAGTAAGCCACCGTTTCAGACCTGCCCTGTGGAGGAAATGGCCAGTTTATTAAATAACAAGTAAGCCACTGTTTCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624604 102 - 91010382 GGAGGAAAT-GCCAGTTTATTAAATAACAAGTAAGCCACCATTTCAGACCTGCCCTAAGGAGGAAAT-GCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCA i chlSab2.chr4 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C e ponAbe2.chr3 199699227 0 + 202140232 C a score=3333.000000 s hg38.chr3_KI270935v1_alt 52673 7 + 197351 AGCCTGC s nomLeu3.chr11 120798132 7 + 123690457 GACCTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18330 7 + 180491593 GACCTGC i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 89624706 7 - 91010382 GACCTGC i chlSab2.chr4 C 0 T 57 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C e ponAbe2.chr3 199699227 0 + 202140232 C e panTro4.chr3_GL389630_random 17170 0 + 103936 C a score=3057.000000 s hg38.chr3_KI270935v1_alt 52680 7 + 197351 CCTGTGG s nomLeu3.chr11 120798139 7 + 123690457 CCTGTGG i nomLeu3.chr11 C 0 T 57 s rheMac3.chr6 18337 7 + 180491593 CCTGTGG i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 89624656 7 - 91010382 CCTAAGG i chlSab2.chr4 T 57 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 161977 0 - 204313951 C e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C e ponAbe2.chr3 199699227 0 + 202140232 C e panTro4.chr3_GL389630_random 17170 0 + 103936 C a score=43769.000000 s hg38.chr3_KI270935v1_alt 52687 50 + 197351 AGGAAATGCCAGTTTATTAAATAACAAGTAAGTCACCGTTTCAGACCTGC s panTro4.chr3_GL389630_random 17170 18 + 103936 --------------------------------TCACCGTTTCAGACCTGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120798089 50 + 123690457 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAGACCTGC i nomLeu3.chr11 T 57 C 0 s rheMac3.chr6 18344 50 + 180491593 AGGAAATGCCAGTTTATTAAGTAACGAGTAAGCCACCGTTTCAGACCTGC i rheMac3.chr6 C 0 T 57 s chlSab2.chr4 89624663 50 - 91010382 AGGAAATGCCAGTTTATTAAATAACGAGTAAGCCACCGTTTCAGACCTGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 161977 50 - 204313951 AGGAAATGCTAGTTTCTTAAAGAATGAGTCAGTCATCCTTTCAGACCTGC i calJac3.chr2 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C e ponAbe2.chr3 199699227 0 + 202140232 C a score=2345.000000 s hg38.chr3_KI270935v1_alt 52737 2 + 197351 CT s panTro4.chr3_GL389630_random 17188 2 + 103936 CC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120798139 2 + 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18337 2 + 180491593 CC i rheMac3.chr6 T 57 C 0 s chlSab2.chr4 89624713 2 - 91010382 CC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162027 2 - 204313951 CC i calJac3.chr2 C 0 C 0 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C e ponAbe2.chr3 199699227 0 + 202140232 C a score=8892.000000 s hg38.chr3_KI270935v1_alt 52739 5 + 197351 TGTGG s panTro4.chr3_GL389630_random 17190 5 + 103936 TGTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699227 5 + 202140232 TGTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798141 5 + 123690457 TGTGG i nomLeu3.chr11 C 0 T 114 s rheMac3.chr6 18339 5 + 180491593 TGTGG i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 89624715 5 - 91010382 TGTGG i chlSab2.chr4 C 0 T 114 s calJac3.chr2 162029 5 - 204313951 TGGGG i calJac3.chr2 C 0 I 3 e mm10.chr13 46094885 1716 - 120421639 I e canFam3.chr34 30184791 134 - 42124431 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C a score=21119.000000 s hg38.chr3_KI270935v1_alt 52744 10 + 197351 AGGAAATGCC s panTro4.chr3_GL389630_random 17195 10 + 103936 AGGAAATGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699232 10 + 202140232 AGGAAATGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798032 10 + 123690457 AGTAAATGCC i nomLeu3.chr11 T 114 C 0 s rheMac3.chr6 18344 10 + 180491593 AGGAAATGCC i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 89624606 10 - 91010382 AGGAAATGCC i chlSab2.chr4 T 114 C 0 s calJac3.chr2 162037 10 - 204313951 GGGAAAGGTC i calJac3.chr2 I 3 I 21 s mm10.chr13 46096601 10 - 120421639 AGGAAATGCT i mm10.chr13 I 1716 C 0 e canFam3.chr34 30184791 134 - 42124431 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C a score=23888.000000 s hg38.chr3_KI270935v1_alt 52754 20 + 197351 AGTTTACTAAATAACGAGTA s panTro4.chr3_GL389630_random 17205 20 + 103936 AGTTTACTAAATAACGAGTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699242 20 + 202140232 AGTTTACTAAATAACGAGTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798042 20 + 123690457 AGTTTATTAAATAATGAGTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18354 20 + 180491593 AGTTTATTAAGTAACGAGTA i rheMac3.chr6 C 0 I 20 s chlSab2.chr4 89624616 20 - 91010382 AGTTTATTAAATAACAAGTA i chlSab2.chr4 C 0 C 0 s mm10.chr13 46096611 14 - 120421639 GACTTATTGAGTCA------ i mm10.chr13 C 0 C 0 e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 162047 21 - 204313951 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C a score=5820.000000 s hg38.chr3_KI270935v1_alt 52774 6 + 197351 AGCCAC s panTro4.chr3_GL389630_random 17225 6 + 103936 AGCCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699262 6 + 202140232 AGCCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798062 6 + 123690457 AGCCAC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 89624636 6 - 91010382 AGCCAC i chlSab2.chr4 C 0 I 71 e rheMac3.chr6 18374 20 + 180491593 I e mm10.chr13 46096625 0 - 120421639 C e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 162047 21 - 204313951 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C a score=2999.000000 s hg38.chr3_KI270935v1_alt 52780 7 + 197351 TGTTTCC s panTro4.chr3_GL389630_random 17231 7 + 103936 TGTTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699268 7 + 202140232 TGTTTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798068 7 + 123690457 CATTTCA i nomLeu3.chr11 C 0 I 57 s mm10.chr13 46096625 3 - 120421639 ----TCA i mm10.chr13 C 0 C 0 e rheMac3.chr6 18374 20 + 180491593 I e canFam3.chr34 30184791 134 - 42124431 I e calJac3.chr2 162047 21 - 204313951 I e chlSab2.chr4 89624642 71 - 91010382 I e macFas5.chr6 180293365 0 - 181584905 C e papAnu2.chr6 173177617 0 - 174439528 C a score=14100.000000 s hg38.chr3_KI270935v1_alt 52787 7 + 197351 AACCTGT s panTro4.chr3_GL389630_random 17238 7 + 103936 AACCTGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699275 7 + 202140232 AACCTGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798132 7 + 123690457 GACCTGC i nomLeu3.chr11 I 57 C 0 s macFas5.chr6 180293365 7 - 181584905 GACCTGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177617 7 - 174439528 GACCTGC i papAnu2.chr6 C 0 C 0 s calJac3.chr2 162068 7 - 204313951 GACCCGC i calJac3.chr2 I 21 C 0 s mm10.chr13 46096628 7 - 120421639 GACCTGT i mm10.chr13 C 0 C 0 e rheMac3.chr6 18374 20 + 180491593 I e canFam3.chr34 30184791 134 - 42124431 I e chlSab2.chr4 89624642 71 - 91010382 I a score=111935.000000 s hg38.chr3_KI270935v1_alt 52794 65 + 197351 CCTGTGGTTTGGAAAAGGTATTATAGAGCCTGTCCTGTGGTTTGATTACGGAGACTGCCCTGTGG s panTro4.chr3_GL389630_random 17245 65 + 103936 CCTGTGGTTTGGAAAAGGTATTATAGAGCCTGTCCTGTGGTTTGATTACGGAGCCTGCCCTGTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699282 65 + 202140232 CCTGTGGTTTGGAAAAGGTATTATAGAGCCTGCCCTGTGGTTTGATTATGGAGCCTGCCCTGTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798139 40 + 123690457 CCTGTGGTTTGGAAAAGGTATTATAGAGC-------------------------CTGCCCTGTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18394 40 + 180491593 CCTGTGGCTTGGAAAAGGTGTTATAGAGC-------------------------CTGCCCTGTGG i rheMac3.chr6 I 20 C 0 s macFas5.chr6 180293372 40 - 181584905 CCTGTGGCTTGGAAAAGGTATTATAGAGC-------------------------CTGCCCTGTGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177624 40 - 174439528 CCTGTGGTTTGGAAAAGGTATTATAGAGC-------------------------CTGCCCTGTGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624713 40 - 91010382 CCTGTGGTTTGGAAAAGGTATTATAGAGC-------------------------CTGCCCTGTGG i chlSab2.chr4 I 71 C 0 s calJac3.chr2 162075 55 - 204313951 CCTGGGGTCTGGGAAAGGTGTTGTAGCTCCTGCACTTGGGTGAC----------CTGCCCTGGGG i calJac3.chr2 C 0 C 0 s mm10.chr13 46096635 37 - 120421639 ATTGAGGCTTGGAAAAGGAATTGGAGAT--------------------------CTGCCCTTG-- i mm10.chr13 C 0 C 0 e canFam3.chr34 30184791 134 - 42124431 I a score=7497.000000 s hg38.chr3_KI270935v1_alt 52859 2 + 197351 TC s panTro4.chr3_GL389630_random 17310 2 + 103936 TC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699347 2 + 202140232 TC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798179 2 + 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18434 2 + 180491593 TC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293412 2 - 181584905 TC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177664 2 - 174439528 TC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624753 2 - 91010382 TC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162130 2 - 204313951 TC i calJac3.chr2 C 0 I 199 s canFam3.chr34 30184925 2 - 42124431 cc i canFam3.chr34 I 134 C 0 e mm10.chr13 46096672 0 - 120421639 C a score=391481.000000 s hg38.chr3_KI270935v1_alt 52861 148 + 197351 ACTTGTTCTTCAGATGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAA-CGACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCGGCAAAAG s panTro4.chr3_GL389630_random 17312 149 + 103936 ACTTGTTCTTCAGATGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAAACGACGGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCAGGATAAACCACATCGGCAAAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699349 148 + 202140232 ACTTGTTCTTCAGATGAACTGATTTTTATGTAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAGCAAAAAA-CCACGGAAAGGGAAGCTTGCAGTGCAAATGCAGGTTCAGGATAAACCACATCAGCAAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798181 148 + 123690457 ACTTGTTCTTCAGATGAACTGATTTTTGTGCAGAGCACACATGTTGGATTCTGCCTGCTAAGAGTTTTTCACATATGATAGCAAAAAA-CCACAGAAAGGGAAGCTTGGGGTGCAAATGCAAGTTCCGGATAAACCACATCAGCAAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18436 148 + 180491593 ACTTGTTCTTCAGGTGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTCTCACATACGATAGCAGAAAA-ACACGGAAAGGGAAGCTCGGGGCACAAATGCAGGTTCAGGATAAAGCACATCCGCGAAAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293414 148 - 181584905 ACTTGTTCTTCAGGTGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTCTCACATACGATAGCAGAAAA-ACACGGAAAGGGAAGCTCGGGGCACAAATGCAGGTTCAGGATAAAGCACATCAGCGAAAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177666 148 - 174439528 ACTTGTTCTTCAGGTGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATACGATAGCaaaaaa-aCACGGAAAGGGAAGCTTGGGGAACAAATGCAAGTTCAGGATAAACCACATCAGCAAAAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624755 140 - 91010382 ACTTGTTCTTCAGGTGAACTGATTTTTGTGCAGAGCACACGTGTTGGATTCTGCCTGGTAAGAGTTTTTCACATATGATAG---------CACGGAAAGGGAAGCTTGGGGTACAAATGCAAGTTCAGGATAAACCACATCAGCAAAAG i chlSab2.chr4 C 0 C 0 s mm10.chr13 46096672 122 - 120421639 CCATGGTTTTTATGCAAACTGTTGTCTGTACAGAACACACAAGTTGGATTCT------------------ACATGTGGTGGTAAAAAA--CACA-----AGAAGCTTG-GGTGTAGCTCCAAGTTCAGGATGAA-CACATCAACTAGAG i mm10.chr13 C 0 I 581 s canFam3.chr34 30184927 140 - 42124431 AGGTGCCCCATAAATTACATGATTTTTATGCAGAGTACA--GTTCAGATTCTTCCAGAACAGAGACTCA-GCGTATGACAGGAAAATG-GGAAGGAAATAGGCACTTGAGGC-CAAATACAACTTCAGGATGCA--ACATCAGCAAG-- i canFam3.chr34 C 0 C 0 e calJac3.chr2 162132 199 - 204313951 I a score=193722.000000 s hg38.chr3_KI270935v1_alt 53009 80 + 197351 GACAAAGGCTCCACAAGGCAGGCGCACAGG--CTGGTTCAGGGCCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT s panTro4.chr3_GL389630_random 17461 80 + 103936 GACAAAGGCTCCACAAGGCAGGCACACAGG--CTGGTTCAGGACCATGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699497 80 + 202140232 GACAAAGGCTCCACAAGGCAGGCACACAGG--CTGGTTCAGGACCCTGTGTGGGCGGCTGGTGGCAGCCTTTCCAGTCAGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798329 78 + 123690457 GACAAAGGCTCCACAAGGCAGGCACACAGG--CTGGTTCAGGAC--TGTGTGGGCAGCTGGTGGCAGCCTTTCCAGTCAGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18584 80 + 180491593 GACAAAGGCTGCACGAGGCAGGCACGCAGG--CTGGTTCAGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGCCCGCC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293562 80 - 181584905 GACAAAGGCTGCACGAGGCAGGCACACAGG--CTGGTTCAGGACCGTGTGTGGGCGGCGGCTGGTGACCTTTCCAGCCCGCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177814 80 - 174439528 GACAAAGGCTGCACAAGGCAGGCACACAGG--CTGGTTCAGGACCGTGTGTGGGCGGCTGCTGGCGGCCTTTCCAGTCAGCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624895 80 - 91010382 GACAAAGGCTGCACGAGGCAGGCACACAGG--CTGGTTCAGGACCGTGTGTGGGCGGCGGCCGGCAGCCTTTCCAGTCAGCT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30185067 78 - 42124431 GCCTGAG---CCGCTTTCCAGACACACAGGCTCTGGCCCAGGACCAGGTG-ATGTTGCTGGTAGCAGCCTCGTCCATCAGCA i canFam3.chr34 C 0 C 0 e mm10.chr13 46096794 581 - 120421639 I e calJac3.chr2 162132 199 - 204313951 I a score=179253.000000 s hg38.chr3_KI270935v1_alt 53089 62 + 197351 -GAACACAGTGAATGGGAAAATC--------------------ATTTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC s panTro4.chr3_GL389630_random 17541 62 + 103936 -GAACACGGTGAATGGGAAAATC--------------------ATTTTTATTGACCATGAAATTTTACTGATTTACCCTCCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699577 62 + 202140232 -GAACATAGTGAATGGGAAAATC--------------------ATTTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798407 62 + 123690457 -GAACACGGTGAATGGGAAAATC--------------------ATTTTTATTCACCATGAAATTTTACTGATTTACCCTCCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18664 61 + 180491593 -GAGCGCGGTGAGTGGG-AGATC--------------------ATTTTTATTCACCATGAAATTTCACCGATTTACCCTCCAC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180293642 61 - 181584905 -GAGCGCGGTGAGTGGG-AAATC--------------------ATTTTTATTCACCATGAAATTTCACCGATTTACCCTCCAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177894 61 - 174439528 -GAACACGGTGAGTGGG-AAATC--------------------ATTTTTATTCACCATGAAATTTTACCGATTTACCCTCCAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89624975 61 - 91010382 -GAGCACGGTGAGTGGG-AAATC--------------------ATTTTTATTCACCATGAAATTTTACCGATTTACCCTCCAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162331 62 - 204313951 -GAACACAGTGAATGGGAAAATG--------------------ACTTGTGTTTACTGTGAAATGGTACTGATGTAGCCTCCAC i calJac3.chr2 I 199 C 0 s canFam3.chr34 30185145 83 - 42124431 GGACAGAAGCACATGGGGAAATTGGCTACAGGAAGAGGATTAGGTTCTGATTTACAGTGAAATTCTGTTAATTTGCCCTCCAC i canFam3.chr34 C 0 I 1614 e mm10.chr13 46096794 581 - 120421639 I a score=408627.000000 s hg38.chr3_KI270935v1_alt 53151 150 + 197351 TAGAATATGCTGATGGCTGTGATCACTGCTCAGAATTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAAtttattattttt------aattttttgagatggagtc----- s panTro4.chr3_GL389630_random 17603 156 + 103936 TAGAATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTTTTTGCCAGAATACAGAATAATA--ATAAAtttattatttttgtttttatttttttgagatggagtc----- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699639 150 + 202140232 TAGAATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCGTACTTA-TTAAAAGTCTTTCCTGCAAAGTATATGAATTCGTGTTTGCCAGGATACAGAATAATA--ATAAAtttattattttt------aatattttgagatggagtc----- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798469 156 + 123690457 TAGAATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTC--GTCTCCTCATACATA-TTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTCTTTGCCAGAATACAGAATAATA--ATAAAtttattgtttttatttttatttttttgagatggagtc----- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 18725 157 + 180491593 TGGAATATGCTGATGGCTGTGATCACTGCTCGGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAATACAGaataata--ataaatttatca-ttttatttttatttttttGAGATGGAGTC----- i rheMac3.chr6 C 0 M 314 s macFas5.chr6 180293703 158 - 181584905 TGGAATATGCTGATGGCTGTGATCACTGCTCGGAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAATTTATCACttttatttttatttttttgagatggagtc----- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173177955 152 - 174439528 TGGAATATGCTGATGGCTGTAATCACTGCTCGAAACTTGCTCTTGCCTCCTTGTACATA-TTAAGAGTCTTTCCTGCGAAGTATATGAATCCGTGTTTGCCAGAatacagaataata--ataaatttatta------tttttatttttttgagatggagtc----- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89625036 159 - 91010382 TGGAATATGCTGATGGCTGTGATCACTGCTCAGAACTTGCTCTTGCCTCCTTGTACATATTTAAGAGTCTTTCCTGCAAAGTATATGAATCCGTGTTTGCCAGAATACAGAATAATA--ATAAAtttttaatttttatttttatttttttgagatgaagtc----- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162393 158 - 204313951 TAGAATATGCTGATGGCTGTAGTCCCTGCTCAGAACTTGTTC-TTCCTCCTTGTACAGT-GTAAGAGTCTTTCCTGCAAAGTACATGAATCCGTGTTTGCCAGAATACAG-ATAGTAGCATACAtttattattattatta-----tttttgagatgaagtagtctc i calJac3.chr2 C 0 C 0 e mm10.chr13 46096794 581 - 120421639 I e canFam3.chr34 30185228 1614 - 42124431 I a score=560602.000000 s hg38.chr3_KI270935v1_alt 53301 265 + 197351 tcattgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccaagcagctggggttacaggcgcatgccaccgtgcccggctaa-ttttgtattttcagtaaagacggggtttcaccatgttggccaggctagtctcgaactcccgacctcaagtgaaccacccaccttggccttccaaagtgctaggattacaggcatgagccactgtgcctg s panTro4.chr3_GL389630_random 17759 264 + 103936 tcattgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagcagctggggttacaggcgcatgccaccatgcctggctaa-ttttgtattttcagtggagatggggtttcaccatgttggccgggctggtctcaaac-cccgacctcaagtgaaccacccaccttggccttccaaagtgctaggattacaggcatgagccactgtgcctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199699789 265 + 202140232 tcactctctcccaggctagagtgcagtggtgcgatctcagctcactgcaccctctgcctcccaggtacaagtgattctcctgtctcagcctcccaagcagctgggattacaggcgtgtgccaccattcccggctaa-ttttgtattttcagtaaagacagggtttcaccatgttggctgggctggtctcgaactcctgacctcaagtgaaccacccacctcggcctcccaaagtgctaggattacaggcatcagccactgtgcccg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798625 265 + 123690457 tcactgtcccccaggctggagtgcagcggcgcgatctcagctcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacgcatgccaccatgcctggctaa-ttttgcattttcaatagagacggggtttcaccatgttggccgagctggtctcgaactcctgacctcaagtgaaccacccaccttggcctcccaaagtgctaggattacaggcaggagccactgtgcctg i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180293861 262 - 181584905 --tctgtcccccaggctggaatgcaatggcgcaatctcagctcactgcaagctctgcctccagggttcaagtgattctcctgcctcagcctcccaagcagctgggattacagacgcacgccaccgtgcctggctaa-ttttgtattttcagtagagtt-gggtttcaccatgttggccgggctggtcttgaactcgtgacctcaagtgaaccacctacctcaacctcccaaagtgctaggattacaggcgtgagccactgcgccta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173178107 263 - 174439528 --tctgtcccccaggctggaatgcaatggcacaatctcagctcactgcaagctctgcctccagggttcaagtgattctcctgcctcagcttcccaagcagctgggattacagacgcatgccaccatgcctggctaa-ttttctattttcagtagagttggggtttcaccatgttggccgggctggtcttgaactcctgacctcaagtgaaccacacacctcggcctcccaaagtgctaggattgcaggcgtgagccactgtgcctc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89625195 265 - 91010382 ttgctgtcccccaggctgaagtgcagtggcgcgatctcagctcactgcaagctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagcaggtgggattacagatgcatgccaccatgcctggctaa-ttttgtattttcagtagagttggggtttcaccatgttggccgggctggtcttgaactcctgacctcaagtgaaccacacacctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcctg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162551 239 - 204313951 gctctgtcacctaggctggagtgcagtggtgcgatcttggctcactacaacttccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctaggactacaggtgcacaccatcacacctggctaatttttgtatttttagtagagacagggtttcaccatgttgtccag---------------------------gaaccactcaccttggcttcccaaagtgctaggattataggcgtgagccactgtgccct i calJac3.chr2 C 0 C 0 e rheMac3.chr6 18882 314 + 180491593 M e mm10.chr13 46096794 581 - 120421639 I e canFam3.chr34 30185228 1614 - 42124431 I a score=769410.000000 s hg38.chr3_KI270935v1_alt 53566 298 + 197351 gccAGGAGCATAAATTTAGTTGGTGACAACGAGTTTTAATTAGAATAGAAgccaggtgcagtggctcccacctgtaatcccagcatttgggaggctgaggcaggcagatcacttgagccccggagttctagaccagcctgggcaacatggcgaaacctgtctctacaaaaat----taaaaaattagccaggcgtggtggtacacacctgaggtaccagctgctcaggaggctgaggcaggatgattgattgagcccgggaagtcaaggctctggcgagctgtgatcacaccattgcgctcc s panTro4.chr3_GL389630_random 18023 298 + 103936 gccAGGAGCATAAATTTAGTTGGTGAAAACGAGTTTTAATTAGAATAGAAgccaggtgcagtggctcccacttgtaatcccagcatttgggaggctgaggcaggcaaatcacttgagccccagagttctagaccagcctgggcaacatggcgaaacctgtctctacaaaaat----taaaaaattagccaggcgtggtggtacacacctgacgtaccagctgctcaggaggctgaggcaggatgagtgattgagcccgggaagtcaaggccctggcgagctgtgatcacaccattgcgctcc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199700054 296 + 202140232 gccAGT-GCATAAATTTAGTTGGTGACAGCGAGTTTTAATTAGAATAGAagccaggtgcagtgattcccacctgtaatcccagcatttgggaggctgaggcaggcagatcacttgag-cccagagttctagaccagcctgggcaacatggcaaaacctgtctctacaaaaat----taaaaaattagccaggtgtggtggtacacgcctgaagtaccagctgctcaggtggctgaggcaggataattgattgagcccgggaagtcaaggctctggcgaactgtgatcacaccattgcactcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120798890 294 + 123690457 accAGGAGCATAAATTTAGTTGGTGACAATGAGTTTTAATTAGAATAGAAgccaggtgcagtggctcccacctgtaatcccagcatttgggaggctgaggcaggcagatcacttgagccccagacttctagaccagcctgggcaacatggcgaaacctgtctctacaaaaat----taaaaaattagccaggtgtggtggtacatgcctgaagtaccagctgctcaggaggctgaggcaaga----tgattgagcctgggaagtcaagtctccggcgagctgtgctcacaccattgcactcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 19196 270 + 180491593 GCCAGTAGTATAAATTCAGTTGGTCACAATGAGTTTTAATTAGAATAGAAgccaggtgcagtggctcacgcctgtaatcccagcatttgggaggctgaggcaggcagatcacttgag-cctggagttctagaccatcctgggcaacatggcgaaacctgtctctacacaaaa---------aattagccaggcgtggtggtacgtg------------------caggaggctgaggcagga----tgattgagcctggaaagtcaaggctccagcaagctgtgatcacaccactgcactcc i rheMac3.chr6 M 314 C 0 s macFas5.chr6 180294123 270 - 181584905 gccAGTAGTATAAATTCAGTTGGTCACAATGAGTTTTAATTAGAATAGAAgccaggtgcagtggctcacgcctctaatcccagcatttgggaggctgaggcaggcagatcacttgag-cctggagttctagaccagcctgggcaacatggcgaaacctgtctctacacaaaa---------aattagccaggcgtggtggtacgtg------------------caggaggctgaggcagga----tgattgagcctgggaagtcaaggctccagcaagctgtgatcacaccactgcactcc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173178370 280 - 174439528 gccaGTAGCATAAATTCAGTTGGTCACAGCAAGTTTTAATTAGAatagaagccaggtgcagtggctcacacctgtaatcccagcatttgggaggctgaggcaggcagatcacttgag-cctggagttctagaccagcctgggcaacatggcaaaacctgtctctacaaaaaa---ataaataattagccaggcgtggtggtacgca------------------caggaggctgaggtaggatgattgattgagcccgggaagtcaaggctccagcaagctgtgatcacaccactgcactcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89625460 280 - 91010382 gccAGTAGCATAAATTCAGTTGGTCACAACAAGTTTTAATTAGAATAGAAgccaggtgcagtggctcacacctgtaatcccagcatttgggaggctgaggcaggcagatcacttgat-cccggagttctagaccagcctgggcaacatggcgaaacctgtctctacacaaaa---ataaaaaattagccaggcgtggtggtacgca------------------caggaggctgaggcaggatgattgattgagccggggaagtcaaggctccagcgagctgtgatcacaccactgcactcc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 162790 272 - 204313951 gccAGTAGCATAAATTTAGTGGATCACAGCAAGTTTCAATTAGAATATAAgccaggcacagtggctcacacctataatcccagcatttgggaggctgaggcaggcagatcacttgagccccagagttctagaccagcttgggcaacatggcaaaacctgtctctaaaaaaaaagaataaaaaatta-----------------------------ccagctgctcaggaggctgaggcaggatgagtgattgag-ctgggaagtcaaggctccagtgagctgtgatatcaccactgcactcc i calJac3.chr2 C 0 C 0 e mm10.chr13 46096794 581 - 120421639 I e canFam3.chr34 30185228 1614 - 42124431 I a score=744630.000000 s hg38.chr3_KI270935v1_alt 53864 276 + 197351 agcccaggtgacatagcgagaccctgtctcaaaagagaaaaaaaG----TGTTTtt---aataaaaacaggctgaaagaaaagatgg-------aggtagtctcccagcgcttggagcaaaaagacaaa----gTATTTGATA---AACTCT--TAGGTACATAAAGGATGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTCACTGCTGGCTGCACA-TCGCTGGCCAGCCATGTGGCCTCTGTGGGTTCTGAACGTGTTGATGGTGCCAACCTCCTGGGCTGAAGTGGAAATG s panTro4.chr3_GL389630_random 18321 275 + 103936 agcccaggtgacatagcgagaccctgtctcaaaaga-aaaaaaaG----TGTTTtt---aataaaaacaggctgaaagaaaagatgg-------aggtagtctcccagcgcttggagcaaaaagacaaa----gTATTTGATA---AACTCT--TAGGTACATAAAGGATGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTCACTGCTGGCTGCACA-TCGCTGGCCAGCCATGTGGCCTCTGTGGGTTCTGAACGTGTTGATGGTGCCAACCTCCTGGGCTGAAGTGGAAATG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199700350 274 + 202140232 agcccaggtgacatagcgagaccctgtctccaaaga-aaaaaaaa----TATTTTT---GATTAAAACAGGCTGAAAGAAAAGATTG-------AGGTAGTCTCCCAGCGCTTGGAGCAAAAAGACAAA----GTATTTGATA---AACTCT--AAGGTACATAAAGGATGTCTAAGGGAACATGCAGACATGGAT----TACTCTGGACTCACTGCTGGCTGCACA-CCCCTGGCCAGCCATGTGGCCTCTGTGGGTTCTGAATGTGTTGATGGCGCCAGCCTCCTGGGCTGAA-TGGAAATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120799184 272 + 123690457 agcccaggtgacatagcgagaccctgtctcaaaaga----aaaaa----TTTCTTT---AATAAAAACAGGCTGAAAGAAAGGATTG-------AGGTAGTTTCCTAGTGCATGGAGCAAAAAGACAAA----GTATTTGATA---AACTCT--TAGGTACATAAAGGATGTCTAAGGGAACATGCGGACATGGAT----TACTCTGGACTCGCTGCTGGCTGCACA-CCCCTGGCCACCCATGTGTCCTCTGTGGGTTCTGAACCTGTTGATGGTGCCAACCTCCTGGGCTGAAGTGGAAATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 19466 274 + 180491593 agcctgggtgacattgcgagagcctgtctcaaaaga----aaaaa----TGTTTTT--AAATAAAAACAGGCTGAAAGAAAAGATTGAGGTAGTAGGTAGTCTCCCAGCGCATGCAGCAGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGGTGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTCACTGCTGGCTGCACACCCCCTGACCAGCCATGTGGCCTCCTTGGGTTCTGAACATGTTGATGGTGCCG-------GGGCTGAAGTGGAAATG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180294393 274 - 181584905 agcctgggtgacattgcgagagcctatctcaaaaga----aaaaa----TGTTTTT--AAATAAAAACAGGCTGAAAGAAAAGATTGAGGTAGTAGGTAGTCTCCCAGCGCATGCAGCAGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGGTGTCTAAGGGAACGTGCGGACACGGAT----TACTCTGGACTCACTGCTGGCTGCACACCCCCTGACCAGCCATGTGGCCTCCTTGGGTTCTGAACATGTTGATGGTGCCG-------GGGCTGAAGTGGAAATG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173178650 274 - 174439528 agcccaggtgacatagtgagagcctgtctcaaaaga----aaaaa----tgttttt--aaataaaaacaggctgaaagaaaaGATTGAGGTAGAAGGTAGTCTCCCAGCGCATGCACCAGAAAGACAAA----GTATTTGGTA---AACTCT--TAGGTACATAAAGGGAGTTTAAGGGAACGTGCGGACATGGAT----TACTCTGGACTCACTGCTGGCTGCACACCCCCTGGCCAGCCATGTGGCCTCCGTGGGTTCTGAACATGTTGATGGTGCCA-------GGGCTGAAGTGGAAATG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89625740 278 - 91010382 agcctgggtgacatagcgagagcctgtctcaaaaga----aaaacaaGTTTTTTTT--AAATAAAAACAGGCTGAAAGAGAAGATGGAGGTAGTAGGTAGTCCCCCAGCGCGTGCAGCAGAAAGACAAA----GTATTTGGTG---AACTCT--CAGGTACATAAAGGGTGTCTGAGGGAACGTGCGGACACGGAT----TCCTCTGGACTCACTGCTGGCTGCACACCCCCTGGCCAGCCATGTGGCCTCCGTGGGTTCTGAACATGTTGATGGTGCCG-------GGGCTGATGTGGAAATG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 163062 272 - 204313951 agcccacgtgacatagcgagatcctgtctcaaaaga----aagaa----TTTTTTTAAAAATAGAAACATGCTGAAAGAAAAGATTG-------AGGTGGTCACCCAGAGCATGGGGTAAAAAGACAAA----GTATCTGATA---AACTCT--TAGGTACATGAAGGATGTCT-AGGGAAAATGCAGGCATGGAT----TACCCTGGACTCACTGCTGGCTGCA---CCGCTGACCAGCTATGTGGCCTCAGTGGATTCTGAGCATGTTGATGGTGCCAGCCTCCTGGGCTGAAGTGAAAATG i calJac3.chr2 C 0 C 0 s mm10.chr13 46097375 233 - 120421639 agccagggcaatgtagagagaccctgtctcaaaaca----aaaGC----CCATTTA---AATTAAAA-ATGCTGAAGAGAAAAGCTG-------ACGAAATCTC--AGTGCATGGAGTCAAAGGAAAAATGACGTAAGTGATATTTAATTCTAATATCTACTTACAGAGC-TGTGAGAGAAAATGCAGAAGTGGATGTTGTACATTTG---CATTCCTGGCTCTAAAGCCCTTTGTC----------------------------------ATAGTGTTTACTTCCTGGGCT------------ i mm10.chr13 I 581 C 0 e canFam3.chr34 30185228 1614 - 42124431 I a score=1841563.000000 s hg38.chr3_KI270935v1_alt 54140 531 + 197351 GAATGGGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTAGAGTAATGAGAAAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCAGATTGATGAGTATGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGTGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCGGCACTGGGAAGGTCAGTGTGGAGCTCGTTCTCACCACAGC----CCAGCACCCACACGGCCCCGCCCAGGTCTGCGGGCTGGCCTTGCTGATGGTGAACGCG---GAGGAGCAGGCCAGATTTAAATCAACTCCCGACAGATTTGAGGCACCGCTGAAAAAGGCACTCTGACAGCAGTCGGGCTTCGGGCTGGAAACAGAATCCAGTGCCTGCAGGTGGTTCA-GAGGAGCCTTAA-GGAAGGGTTGCT--CTGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGGGAGGAGATGATGATTGT s panTro4.chr3_GL389630_random 18596 531 + 103936 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTGGAGTAATGAGAAAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATCGATGAGTACGATCACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTCTTTCTCACCACAGC----CCAGCACCCACACGGCCCCGCCCAGGTCTGCGGGCTGGCCTTGCTGATGGTGAACACG---GAGGAGCAGGCCAGATTTAAATCAACTCCGGACAGATTTGAGGCACCGCTGAAAAAGGCACTCTGACAGCAGTCGGGCTTCGGGCTGGAAACAGAATCCAGTGCCTGCAGGTGGTTCA-GAGGAGCCTTAA-GGAAGGGTTGCT--CCGTGGTGTGGGCCGGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGGGAGGAGATGATGATTGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199700624 533 + 202140232 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTGTTTTTTT--CTGTATTGCTCTGTTAGAGTAATAAGAAAT--------------GTGATTGTGTGT--------------------CTGGCCTCAGGTGTGGATTAATGAGTACGATCACTCCAAGCCCATCCAGGGGCAGCAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTTGTTCTCACCGCAGC----CCAGCACCCACACAGCCCCGCCCAGGTCTGCGGGCTGGCCTTGCTGATGGTGAACGGG---GAGGAGCAGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAAAAGGCACTCTGACAGCAGTCAGGCTTCGGGCTGGAAACAGAATCCAGTGCCTGCAGGTGATTCA-GAGGAGCCTTAAGGGAAGGGTTGCT--CCATGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGATAGGGGAAGAGATGATGATTGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120799456 526 + 123690457 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTGTTGCTCTGTTAGAGTAATGAGAAAT--------------GTGATGGTGTTT--------------------CTGGCGTCAGGTGTGGATTAATGAGTGCGATCACTCCAAGCCCATCGAGGGGAAACAGAAGAAGCCCTTTGAGAAGCACTGGAGGAAGCACACCCTGTCCTATTTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTTGTTCTCACCACAGC----CCAGCACCCACACGGCCCCACCCAGGTCTGCAGGCTGGCCTTGCTGATGGTGAACGGG---GAGGAGCAGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAAAA-GCACTCTGAC-GCAGTCAGGCTTCGGGCTGGAGACAAAATCCAGTGCCTGCAGGTGGTTCA-GAGGAGCCTTAA-GGAGGGGTTGCT--CCGTGGTGTGGGCCAGATGGAAGTCCCTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGGGAGGA---GATGATTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 19740 530 + 180491593 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTAGAGTAATAAGATAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCTTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTCGTTCTCACCACAAC----CCAAAATGCGCACGGCCCTGCCCAGGTTCACGGGCCGACCTTGCTGATGGTGAACGGG---GAGGAGCAGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAAAAGGC-CTCTGACAGCAGTCAGGCTTCTGGCTGGAAACAGAATCCAGCGCCTGCAGGTGGTTCA-GAGGAGCCTTAA-GGAAGGGCTGTT--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGGGAGGAGATGAGGATTAT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180294667 530 - 181584905 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTAGAGTAATAAGATAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCTTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTCGTTCTCACCACAAC----CCAAAATGCGCACGGCCCTGCCCAGGTTCACGGGCCGACCTTGCTGATGGTGAACGGG---GAGGAGCAGGCCAGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAAAAGGC-CTCTGACAGCAGTCAGGCTTCTGGCTGGAAACAGAATCCAGCGCCTGCAGGTGGTTCA-GAGGAGCCTTAA-GGAAGGGCTGCT--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTGAGCGGGGAGGAGATGAGGATTGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173178924 531 - 174439528 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTAGAGTAATAAGATAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATTGATGAGTATGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCCCGTTCTCACCACAGC----CCAAAATGCGCATGGCCCCGCCCAGGTTCACAGGCCGACCTTGCTGATGGTGAACCGG---GAGGAGCAGGCCGGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAAAAGGCACTCTGACAGCAGTCAGGCTTCTGGCTGGAAACAGAATCCAGCGCCTGCAAGTGGTTCA-GAGGAGCCTTAA-GGAAGGGCTGCT--CCGTGGTGTGGGCCAGATGGAAGTCACTGGGCAG-GAGCAAGTGTCCAAGGCctggtgggtggggaggagatGAGGATTGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89626018 530 - 91010382 GAATGAGTTCTAGGGCATC-------------TGTCTCTTAGATCATTTTAAT--GTTTGCTGTG-TTTTTT--CTGTATTGCTCTGTTAGAGTAATAAGATAC--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATTGATGAGTACGATTACTCCAAGCCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTACGTGGACGTCAGCACTGGGAAGGTCAGTGTGGAGCTGGTTCTCACCACAGC----CCAAAATGCGCACGGCCCCGCCCAGGTTCGCGGGCTGACCTTGCTGATGGTGAACCGG---GAGGAGCAGGCCGGATTTAAATCAACTCCTGACAGATTTGAGGCACCACTGAAACAGGCACTCTGACAGCAGTCAGGCTTCTGGCTGGAAACCGAATCCAGCGCCTGCAGGTGGCTCA-GAGGAGCCTTGA-GGAAGGGCTGCT--CCGTGGTGTGGGCCAGATGGAAGTCCCTGGGCAG-GAGCAAGTGTCCAAGGCCTGGTG-GCGGGGAGGAGATGAGGATTGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 163334 515 - 204313951 GAATGAGTTCTAGGCCATG-------------TGTCTCTTACGTCATTTTAAT--GTTTGCTGTG--TTTTT--CTGTATTGCTCTGTTAGAGTAATAAGAAAT--------------GTGATGGTGTTT--------------------CTGGCCTCAGGTGCGGATTGATGAGTACGATTACTCCAAACCCATCCAGGGGCAACAGAAGAAGCCCTTTGAGGAGCACTGGAGGAAGCACACCCTGTCCTATGTGGACGTGGGCACTGGGAAGGTCAGTGTGGACTTTGTTCTCACCACAGC------------CGCCCCGCCCCACCCAGGTCTGCAGGCTGGCCTTGCTGATGGTGAATGGG---GAGAAGCAGGCCAGATTTAAGCCAGC-ACTGACAGATGTGAGGCACCACTGAGAAA-GCACTCTG---TCAGTCAGGCTTCTGGCCAGAAAC-GGATCCAGTGCCTGTGAGTGGTTCA-GAGGAGCCTTA--GGAAGGGTTGCT--CCGTGGTGTGGGCCAAATGGAAGTCACTGGACAG-GAGCAAGTGTCCAAGGCCTGGTGGCAGGGGAGGAGACAATGATTGT i calJac3.chr2 C 0 C 0 s mm10.chr13 46097608 479 - 120421639 -------TGTCTGTGCATC----------------------------TTTAAT--ATTTTCTGTG-GTTTTA--GTGTTGTTCTCTG--------GTGAGAGAT--------------GGAGGTATGTTT--------------------TT-ACCTCAGGTGCGGGTCGATGAGTATGATTACTCCAAGCCCATCCAGGGACAGCAGAAGAAGCCGTTTGGGGAACACTGGAGGAAGCACACCCTCTCATATGTGGACATCAAGACTGGCAAGGTATGTGGG---------CATGCATCAGC----CCAG---------GGATGTGCTGAGCCACTCTATTTGGCTTT--TGATGGTTGACCAGTTTAGAAAGCAACCTAGTTTTAAACCAGTTGTTAACTGAACCAAGATATCACTGAAAAAAAG----TAACGTGAGTCATGCTTCTTGCTAGAAACAGAAACCAGTGCCTG--GGTGGTTCACGGGGACCCTTAG-TATAGGACTGGTTCTCATCTTCTGTACCAGGTGAAGAGCACTGGGCAATAATCAGATGTCTGATGCTTGTGG--TAGGGAGTTAGTGGTGACTAT i mm10.chr13 C 0 I 262 s canFam3.chr34 30186842 542 - 42124431 GAGTGGGATCCAGGGGATTCACATCAGACTAGTCTCTCATGTATCATTTTAATGAGTTTGCCATG-TTTTCCAGTTATATTGCCCTATTAGAGAAATAAGAAATTTGAAGTGTATTTGTTGATGGTATTTTCTGAAATAAACTAATTTCCCTGGCCTCAGGTGCGGATTGACGAGTATGATTACTCTAAGCCCATCCAGGGACAGCAGAAGAAGCCGTTTGAGGAGCACTGGAGAAAGCACACCCTTTCCTACGTCGATATCAAGACTGGGAAGGTATGTGGGGAACGTGTCCTGCTCACGGATGCACTAATGACTGTGCCGTCCCAT--ATATTCTAGAGTACAACTT----ATGATGGGCTGG---GAGAAGCAACATGGATTTAAGTCC-CTGTTGGCAGACCTGAGACACTACTGAAAAGGACTCTT--------GTTGGGCTTCTC-TTGGAAACAGAATCCAGTGTGGATGGGTGGTTTA-GAAGTGCT-----GG------TCTT--CCA----------CAGTTGTAG--CACCTGGCAG-G---GAGTGCCCAAGGCTTGGTGGCAGGGGAGAGGATGATTCT--- i canFam3.chr34 I 1614 C 0 a score=610265.000000 s hg38.chr3_KI270935v1_alt 54671 201 + 197351 -GGACCTAGCGAGA--AAGTCAGCATCTGTGTGGTGGGG--ACAGAGCCACTACCAGAAACCAGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCTTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAGGGGAGCAGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA s panTro4.chr3_GL389630_random 19127 201 + 103936 -GGACCTAGCGAGA--AAGTCAGCATCTGTTGGGTGGGG--ACAGAGCCACTACCAGAAACCAGTCCCGAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAAGGGAGCTGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701157 201 + 202140232 -GGACCTGGCGAGA--AAGTCAGCATCTGTGGGGTGGGG--ACACAGCCACTACCAGAAACCAGTCCTAAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCATCTGCAGGGGAGCTGAGGGGATGTGGTACAGCCCTTAGCATCCCCTGGGCACTGAGCAAGTAGAGAAGGGCAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120799982 201 + 123690457 -GGACCTAGCGAGA--AAGTCAGCATCTGTAGGGTGGGG--ACACAGCCACTACCAGAAACCAGTCCCATGCCAAGAGAGCCCGGAAGAGACCCCTCCCCTCTCCTCCCATGGGCTGGGCCAACTGGAAGCGCCTGCAGGGGAGCTGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGCAGA i nomLeu3.chr11 C 0 I 214 s rheMac3.chr6 20270 203 + 180491593 -GGACTTAGGGAGA--AAGTCAGCGTCTGTGGGGTGGGGACACACAGCCACTACCAGAAACCAGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCCTCCCTTGGGCTGGCCCAGCTGGAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCGCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i rheMac3.chr6 C 0 I 5 s macFas5.chr6 180295197 201 - 181584905 -GGACTTAGGGAGA--AAGTCAGCGTCTGTGGGGTGGGG--ACACAGCCACTACCAGAAACCAGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCCTCCCTTGGGCTGGCCCAGCTGGAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTGCAGCGCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i macFas5.chr6 C 0 I 5 s papAnu2.chr6 173179455 201 - 174439528 -GGACTTAGGGAGA--AAGTCAGCGTctgtggggtgggg--acacagccactaCCAGAAACCAGTCCCAAGCCAAGGGAGCCCAGAAGagacccctcccctctcctcccttggGCTGGCCCAACTGGAAGCATCTGCAGGGGAGCCGAGGGGATGTGGTACAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i papAnu2.chr6 C 0 I 5 s chlSab2.chr4 89626548 203 - 91010382 -GGACTTAGGGAGA--AAGTCAGCGTCTGTGGGGTGGGGACACACAGCCACTACCAGAAACCAGTCCCAAGCCAAGGGAGCCCAGAAGAGACCCCTCCCCTCTCCTCCCTTGAGCTGGCCCAACTGGAAGCATCTGCACGGGAGCCGAGGGGATGTGGTGCAGCCCTTAGCATCCCCTGGGCACTGAGCAAGCAGAGAAGGGAAGG i chlSab2.chr4 C 0 I 5 s calJac3.chr2 163849 199 - 204313951 -AGACCTAGCAAG---AAGTCAAGGTCTG--GGGTGGGGACACTCAGCCACTACCAGAAACCTGTCCCAAGCCAAGGGAGCCCAGAAGAGACCACTCCCCTCTCTTCCCACAGGCTGGGCCACCTGGAAGCAGCAGCAGGGAAGCTGAGGGG-TGCGGTGCAGCCCTTAGCCTCCCTTGGGCACTGAGCAAGCAGAGAAGGGCAGA i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187384 136 - 42124431 GGAGCCCAATGAGAGCAGGTC-------GTGGGGTGGGG--GCAAGGT--------------------------GGGGGG----------------------------CATTGGCTGGACCATCTGGAGGCAGCCTCAGGGAACACG-GAGTATGCTGTGTAGCCCACAGCATGGGCCCAGCACAGAGCAAGCAGAGGAG------ i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I a score=69982.000000 s hg38.chr3_KI270935v1_alt 54872 26 + 197351 AATGGAGGCAGGGTTGGGGTAAGCAG s panTro4.chr3_GL389630_random 19328 26 + 103936 AATGGAGGCAGGGTTGGGGTAAGCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701358 26 + 202140232 AATGGAGGCGGGGTTGGGGTGAGCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800397 26 + 123690457 AATTGAGGAGGGGTTGGGGTAAGCAG i nomLeu3.chr11 I 214 C 0 s rheMac3.chr6 20478 26 + 180491593 AATTGAGGAGGGGTTGGGGTGAGCAG i rheMac3.chr6 I 5 I 15 s macFas5.chr6 180295403 26 - 181584905 AATTGAGGAGGGGTTGGGGTAAGCAG i macFas5.chr6 I 5 I 18 s papAnu2.chr6 173179661 26 - 174439528 AATTGAGGAGGGGTTGGGGTGAGCAG i papAnu2.chr6 I 5 C 0 s chlSab2.chr4 89626756 25 - 91010382 AATTGAGGAGGGGTTGGGGTGAGCA- i chlSab2.chr4 I 5 C 0 s calJac3.chr2 164048 26 - 204313951 AAGTGAGAAGCGGGTTGGGTGAGCAG i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187520 16 - 42124431 ----------GGGGTGCAGTGGGCAG i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I a score=46973.000000 s hg38.chr3_KI270935v1_alt 54898 53 + 197351 CGTCCTGGGAACAGCCAGCCGAGGG--TGTGGTAGGGGGGTTGCAGCTTGTTCCA s panTro4.chr3_GL389630_random 19354 53 + 103936 CGTCCTGGGAACAGCCAGCCAAGGG--TGTGGTAGGGGGGTTGCAGCTTGTTCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701384 45 + 202140232 CGTCCTGGGAACAGCCAGCTGAGGG--TGTGGTAGGGGGGTTGCAGC-------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800423 46 + 123690457 CATCCTGGGAACAGCCAGCCGAGGG--TGTGGTAGGGGGGTTGCAGCC------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295447 53 - 181584905 TGTCCTGGGAACAGCCAGCCAAGGG--TGTGGTAGGGGGGTTGCAGCCTTGTTCC i macFas5.chr6 I 18 T 56 s papAnu2.chr6 173179687 38 - 174439528 TGTCCTGGGAACAACCAGCCAAGGG--TGTGGTAGGGGGG--------------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89626781 16 - 91010382 --------------------GAGGGTTTGTGGTGAG------------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164074 44 - 204313951 CGTCCTGGTAACAGCCAGCCGAGGG--TGTGCT-GGAGGCTTGCAGC-------- i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187536 9 - 42124431 AGTCCTGGG---------------------------------------------- i canFam3.chr34 C 0 C 0 e rheMac3.chr6 20504 15 + 180491593 I e mm10.chr13 46098087 262 - 120421639 I a score=764.000000 s hg38.chr3_KI270935v1_alt 54951 8 + 197351 CACAAGCA s panTro4.chr3_GL389630_random 19407 8 + 103936 CACAAGCA i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr6 20504 15 + 180491593 I e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187545 0 - 42124431 C e calJac3.chr2 164118 0 - 204313951 C e chlSab2.chr4 89626797 0 - 91010382 C e macFas5.chr6 180295500 56 - 181584905 T e papAnu2.chr6 173179725 0 - 174439528 C e ponAbe2.chr3 199701429 0 + 202140232 C e nomLeu3.chr11 120800469 0 + 123690457 C a score=40986.000000 s hg38.chr3_KI270935v1_alt 54959 40 + 197351 CAGCGTCTTGGGAACAGCCAGCCGAGGGTGTGGTAGGGGG s panTro4.chr3_GL389630_random 19415 40 + 103936 CAGCGTCTTGGGAACAGCCAGCCGAGGGTGTGGTAGGGGG i panTro4.chr3_GL389630_random C 0 I 130 s rheMac3.chr6 20519 40 + 180491593 CAGCGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i rheMac3.chr6 I 15 I 1 s macFas5.chr6 180295444 40 - 181584905 CAGTGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i macFas5.chr6 T 56 I 1 s chlSab2.chr4 89626797 40 - 91010382 CAGCGTCCTGGGAACAGCCAGCCAAGGGTGTGGTAGGGGG i chlSab2.chr4 C 0 I 1 s canFam3.chr34 30187545 27 - 42124431 -------------ACAGCCAGCTTAGGTTGCAGTAGAGCC i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e calJac3.chr2 164118 0 - 204313951 C e papAnu2.chr6 173179725 0 - 174439528 C e ponAbe2.chr3 199701429 0 + 202140232 C e nomLeu3.chr11 120800469 0 + 123690457 C a score=9783.000000 s hg38.chr3_KI270935v1_alt 54999 6 + 197351 TTGCAG s panTro4.chr3_GL389630_random 19585 6 + 103936 TTGCAG i panTro4.chr3_GL389630_random I 130 C 0 s rheMac3.chr6 20560 6 + 180491593 TTGCAG i rheMac3.chr6 I 1 I 1 s macFas5.chr6 180295485 6 - 181584905 TTGCAG i macFas5.chr6 I 1 I 10 s papAnu2.chr6 173179725 6 - 174439528 TTGCAG i papAnu2.chr6 C 0 I 1 s chlSab2.chr4 89626838 6 - 91010382 CTGCAG i chlSab2.chr4 I 1 I 1 s canFam3.chr34 30187572 6 - 42124431 TCACAG i canFam3.chr34 C 0 I 1 e mm10.chr13 46098087 262 - 120421639 I e calJac3.chr2 164118 0 - 204313951 C e ponAbe2.chr3 199701429 0 + 202140232 C e nomLeu3.chr11 120800469 0 + 123690457 C a score=27716.000000 s hg38.chr3_KI270935v1_alt 55005 9 + 197351 CTTGTTCCA s panTro4.chr3_GL389630_random 19591 9 + 103936 CTTGTTCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701429 9 + 202140232 CTTGTTCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800469 8 + 123690457 -TTGTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20567 9 + 180491593 CTTGTTCCA i rheMac3.chr6 I 1 C 0 s papAnu2.chr6 173179732 9 - 174439528 CTTGTTCCA i papAnu2.chr6 I 1 C 0 s chlSab2.chr4 89626845 9 - 91010382 CTTGTTCCA i chlSab2.chr4 I 1 C 0 s calJac3.chr2 164118 9 - 204313951 CCTGTTCCA i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187579 9 - 42124431 CTTATTCCA i canFam3.chr34 I 1 C 0 e mm10.chr13 46098087 262 - 120421639 I e macFas5.chr6 180295491 10 - 181584905 I a score=96708.000000 s hg38.chr3_KI270935v1_alt 55014 28 + 197351 CACAAGCACAGTTCACCTGTGTGGCATT s panTro4.chr3_GL389630_random 19600 28 + 103936 CACAAGCACAGTTCACCCGTGTGGCATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701438 28 + 202140232 CACAAGCACAGTTCACCCGTGTGGCATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800477 28 + 123690457 CACAAGCACAGTTCACCCGTGTGGCATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20576 28 + 180491593 CACAAGCACAGTTCACCTGTGTGGCATT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180295501 28 - 181584905 CACAAGCACAGTTCACCTGTGTGGCATT i macFas5.chr6 I 10 C 0 s papAnu2.chr6 173179741 28 - 174439528 CACAAGCACAGTTCACCTGTGTGGCAtt i papAnu2.chr6 C 0 M 50 s chlSab2.chr4 89626854 28 - 91010382 CACAAGCACAGTTCACCTGTGTGGCATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164127 27 - 204313951 CGCAAGCGCAGTTCACC-ATGTGGCATT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187588 28 - 42124431 CCAAAGCATAACTCATCCATTTGCCATT i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I a score=225944.000000 s hg38.chr3_KI270935v1_alt 55042 85 + 197351 TCCACTGGGCATTGAGATTCAGAAATCATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCATAACTTGTAAGGGAGAGTCGTAT s panTro4.chr3_GL389630_random 19628 85 + 103936 TCTGCTGGGCATTGAGATTCAGAAATCATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCATAACTTGTAAGGGAGAGTCGTAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701466 85 + 202140232 TCCGCTGGGCATTAAGATTCAGAAATAATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCTTAGCTTGTAAGAGAGAGTCGTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800505 85 + 123690457 TCCGCTGGGCATTGAGATTCAAAAATAATGAAGACAGAAAGCTTTTACCCTTAAGCTTTTCGTAGCTTGTAAGAGATAGTCGTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20604 85 + 180491593 TCCGCTGGGCATTAAGATTCAGAAATAATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCGTAGCTTGTAAGAGATAGTCGTAT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180295529 85 - 181584905 TCCGCTGGGCATTAAGATTCAGAAATAATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCGTAGCTTGTAAGAGATAGTCGTAT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 89626882 85 - 91010382 TCCGCTGGGCATTAAGATTCAGAAATAATGAAGATAGAAAGCTTTTACCCTTAAGCTTTTCGTAGCTTGTAAGAGATAGTCGTAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164154 85 - 204313951 CCCACTGGGCATTAAGATTCAGAAATAATGAAGATGGAAAGCTTTTACCCTTAAGCTTTTCATAGCTTGTAAGAGATAGTTGTAT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187616 75 - 42124431 TCTGCTGGACATTAAGAATCAGAACT----AAGATATAAAGTGTT---ACTTGAGCTTTTCAGA-CTTGTAAGGGAGAGTCTT-- i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e papAnu2.chr6 173179769 50 - 174439528 M a score=536400.000000 s hg38.chr3_KI270935v1_alt 55127 174 + 197351 AATCACTTAGCTGTGTCTGTGGAAGTTAC---CTTTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTGA-TTCAGGCAGTGGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATAGTATAG----AGAGGTCACACTTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCGGGTT s panTro4.chr3_GL389630_random 19713 174 + 103936 AATCACTTAGCTGTGTCTGTGGAAGTTAC---CTTTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTGA-TTCAGGCAGTGGGTCATTTTCAGGATTTATCATGAAGGCCATTTCCTGATAGTATAG----AGAGGTCACACTTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCGGGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701551 174 + 202140232 AATCACTTAGCTGTGTCTGTGGAAGTTAC---CTTTG-GACTCTCACT--------ATCATCTAGTTTGTCTGTGA-TTCAGGCAGTAGGTCATTTTCAGGATTTATCATGAAGACCATTTCCTGGTAGTGTAT----AGAAATCACACTTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCAGGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800590 174 + 123690457 AATCATTTAGCCATGTTTGTGGAAGTTAC---CTTTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTTA-TTCAGGCAGTAGGTCATTTTCAGGATTTATCATGAAGGCCATTTCTTGATACTGTAT----AGAAATCACACTTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCAGGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20689 174 + 180491593 AATCACTTATCTGTGTCTGTGGAAGTTAC---CTGTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTAA-CTCAGGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----AGAAATTACACCTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCGGGTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180295614 174 - 181584905 AATCACTTATCTGTGTCTGTGGAAGTTAC---CTGTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTAA-TTCAGGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----AGAAATCACACCTCACTCGCTTAGCACAAGTCTATTTT---TAATGTTTCCGGGTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173179819 173 - 174439528 AATCACTTATCTGTGTCTGTGGAAGTTAC---CTGTG-GACTCTCACT--------ATCATCTAGTGTGTCTGTAA-TTCAGGCAGTAGGTCATTTTCAGAATTTATCATGAAGGCCATTTCCTGATCGTATAT----AGAAATCACA-CTCACTCGCTTAGCACaagtctatttt---taatgtttccgggtt i papAnu2.chr6 M 50 C 0 s chlSab2.chr4 89626967 171 - 91010382 AATCACTTATCTGTGTCTGTGGAAGTTAC---CTTTG-GACTCTCACT--------ATCATCTAGTGTGTCTGT----TCAGGCAGTAGGTCATTTTCAGAATTTGTCATGAAGGCCATTTCCTGATCGTATAT----AGAAATCACACCTCACTCGCCTAGCACAAGTCTGTTTT---TAATGTTTCCGGGTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164239 172 - 204313951 AATCATTTACATGCGTC--TGGCTGTTTC---GTTTG-GGCTCTCACT--------GTCATTTAGTATGCCTGTAA-TTCAGGCAATCGGTCATTTTCAGGATTTATCATGAAGGCCATTTTCTGATAGTATAT----AAAAATCACACTTCACTTGCTTAGCGAAAGTCTGTTTT---TAACGTTTTGGGGTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30187691 191 - 42124431 AATCATTTATGTGAGTCTACAGAAATAACGTGCTTTGCTGCCATCACTTAATACAGAGAGCCTAGTGTGTCTGTTATTTCAAGTAGGCAGTAACTTTCATAATTTTGCGTGAAGGCTATTTTCTGACAGTGTATAGAAAGAAATGAGACTT---TCTCTCGGTACAGCCCTGTTTTTAGTAATGTTCAAGGGTT i canFam3.chr34 C 0 I 149 e mm10.chr13 46098087 262 - 120421639 I a score=28686.000000 s hg38.chr3_KI270935v1_alt 55301 15 + 197351 CAGG-ttttttgttt-t s panTro4.chr3_GL389630_random 19887 15 + 103936 CAGG-ttttttgttt-t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701725 15 + 202140232 CGGG-ttttttgttt-t i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800764 15 + 123690457 TGGG-ttttttgttt-t i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20863 15 + 180491593 CGGG-TTTTTTGTTTT- i rheMac3.chr6 C 0 I 53 s macFas5.chr6 180295788 14 - 181584905 CGGG-ttttttgttt-- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173179992 14 - 174439528 tggg-ttttttgttt-- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627138 14 - 91010382 CGGG-ttttttgttt-- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164411 16 - 204313951 TGGGtttttttgttt-t i calJac3.chr2 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187882 149 - 42124431 I a score=456887.000000 s hg38.chr3_KI270935v1_alt 55316 218 + 197351 gtttttgttgttctgagatagagtctcatctcttttgcccaggctgaaatgtggtggctcgatctcatctcactgcagcctcaacctcccctcggctcaggtgatcctcccacctcagcctcccgggca--------catgccaccatgcctggctaatttttgtatgttttgtagagacggggttttgccacgttgcccaggctagtcttgagctcctgagctca s panTro4.chr3_GL389630_random 19902 218 + 103936 gtttttgttgttctgagatagagtctcacctcttttgcccaggctgaaatgtggtggctcgatctcgtctcactgcaccctcaacctccccccggctcaggtgatcctcccacctcagcctcccgggca--------catgccaccatgcctggctaatttttgtatgttttgtagagacggggttttgccacattgcccaggctagtcttgagctcctgagctca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701740 226 + 202140232 gtttttgtttttctgagatagagtcttatctctgttgcccaggctgaaatgtggtggctcgatctcgtctcactgcagcctcaacctccccccggctcaggtgatcctcccacctcagcctcccgggcacatgccaccatgccaccatgcctggctaatttttgtatgtttcgtagagatggggttttgccacgttgcccaggctagtcttgaactgctgagctca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800779 218 + 123690457 gtttttgtttttctgagatagagtctcatctctgttgcccaggctgaaatgtggtggctcgatctcgtctcactgcagcctcaacctcccgccggctcaggtgatcctcccacctcagcctcccaggca--------catgccaccatgcctggctaatttttgtatgttttgtagagacggggttttgccacgttgcccaggctggtcttgagctcctgagctca i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 180295802 198 - 181584905 ----------ttctgagac--agtctcatctctgttgcccaggctgaaatgtggtgggtcgatcttgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctcccaggca--------cacaccaccatgcctggctaatttttgtatgttttgtagagacggggttttgccacattgcctaggctagtcttgaactct-------- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180006 197 - 174439528 ----------ttctgagac--agtctcatctctgttgcccaggctgaaatgtggTGGcttgatcttgtctcactgcagcctcaacctccccctggctcaggtgatcctcccacctcagcctcccaggca--------catgccaccatgcctggctaatttttgtatgttttgtagagacgggg-ttcgccacgttgcctaggctggtcttgaactca-------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627152 198 - 91010382 ----------ttctgagac--agtctcatccctgttgcccaggctgaaatgtggtggctcgatcttgtctcactgtagcctcaacctccccctggctcaggtgatcctcccacctcagcctcccaggca--------cacgccaccatgcctggctaatttttgtatgttttgtagagatggggtttcgccacgttgcctaggctagtcttgaactca-------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164427 214 - 204313951 ---gttttatttctgagatagagtctca-ctctgttgcccaggctggaatgcagtggcttggtctcatctcactgcagcctcaacctcccccaggctcaagtgatcctcctgcctcagcctcccaggca--------cgtgccaccatgcctggctaatttttgtatgttttgtagagacacggtttcaccatgttgcccagactagttttgaactcctgagctca i calJac3.chr2 C 0 C 0 e rheMac3.chr6 20878 53 + 180491593 I e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187882 149 - 42124431 I a score=1207911.000000 s hg38.chr3_KI270935v1_alt 55534 417 + 197351 agtgatccacctgtcttggcctccccaacaggcatgaaccaacacgcccagccAGtttcagtgatttttgaagaaatacatactcattttagaaagtacaaagagattgaaataagagctcactaac----cagagatgacccattatggtttaaatttctttgtatatgtgcctaccttttcctgtgtgtgcatatttaatacacggcttgagtattccttctctgaaatccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atatttgcattacacttactgtctgagcatccttaatcggaagatctgactccatagcacatttcttttgaatgtcatgctggtgctc-agaaagtttcagatttgggagaatttcagatgtttggattagggatgttctacc s panTro4.chr3_GL389630_random 20120 418 + 103936 agtgatccacctgtcttggcctccccaacaggcatgaaccaacacgcccagccAGtttcagtgatttttcaagaaatacatactcattttagaaagtacaaagagattgaaataagagctcactaac----cagagatgacccattatggtttaaatttctttctatatgtgcctaccttttcctgtgtgtgcatatttaatacatggcttgagtattccttctctgaaatccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atatttgcattacacttactgtctgagcatccctaatcggaagatctgactccatagcacatttcttttgaatgtcatgctggtgctctagaaagtttcagatttgggagaatttcagatgtttggattagggatgttctacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199701966 417 + 202140232 agtgatccacgtgtcttggcctccccaacaggcatgaaccaacacgcccagccAGTTTCAGTGATTTTTCAAGAAATACATACTCATTTTagaaagtacaaagagattgaaataagagctcactaac----cagagatgacccattatggtttaaatttctttgtgtatgggcctgccttttcctgtgtgtgcatatttaatatacagcttgagtattccttctctgaaacccttgggaccagaagtgttttggatttcaggcttgttcagactttgga--atgtttgcattatacttactgtctgagcatccctaatcggaagatctgactccctagcacatttgttttgaatgtcatgctggtgctc-agaaaatttcatatttgggagaatttcagatgtttggattagggatgttcaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120800997 417 + 123690457 agtgatccacctgttttggcctccccaacaggcatgaacaaacacgcccagccAGtttcagtgatttttcaagaaatacatactcattttagaaagtacaaagagattgaaataagagctcactaac----ttgagatgacccattatggtttaaatttctttgtatctgcgcctaccttttcctgtgtgtgcatatttaatacatggcttgagtattccttctctgaaatccttgggaccagaagcgttctggatttcgggcttgttcagactttgga--atatttgcattatacttactgtctgagcatccctaatgggaagatctgactccatagcacatttcttttgaatggcatgttggtgctc-agaaagtttcagatttgggagaatttcagatgtttggattagggatgttcaacc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 20931 415 + 180491593 AGTGATCCACCTGTCTTGACCTCCCCAACAGGCATGAACCAACACGCTCAGCCAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTcagaaagtacaaagagattgaaataagagctcac-aac----cagagatgacccattatggtttaaatttctttgtatatgtgcctaccttttcctgtgtgtgcatatttaatacacaacttgagtattccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atatctgcatgatacttactgtctgagcat-cccaatcagaagatctgactccatagcacatttcttttgaatgtcatgttggtgctc-agaaagcttcagattttggagaatttcagatttttgcattagggatgttcaacc i rheMac3.chr6 I 53 C 0 s macFas5.chr6 180296000 407 - 181584905 agtgatccacctgtcttgacctccccaacaggcatgaaccaacacactcagccAGTTTTAGTGATTTTTCAAGAAACACATACTTATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCAC-AAC----CAGAGACGACCCATTATGGTTTAAATTTCTTTGTGTATGTGCCTACCTTTTCCTGTGTGTGCATTTTTAATATACA--------attccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttgga--atatctgcatgatacttactgtctgagcat-cccaatcagaagatctgactccatagcacatttcttttgaatgtcatgttggtgctc-agaaagcttcagattttggagaatttcagatttttgcattagggatgttcaacc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180203 416 - 174439528 agtgatccacctgtcttgacctccccaacaggcatgaaccaacacGCTCAGCCAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAgtacaaagagattgaaataagaGCTCACTAAC----CAAAGATGACCCATTATGGtttaaatttctttgtatatGTGCCTACCTTTTCCTGTGTGTGCATATTTAATACACAACTTGAGTATTCCTTCTCTGAAAtccttgggaccagaagtgtttcggaTTTCAGGCTTGTTCAGACTTTGGA--ATATCTGCATGATACTTACTGTCTGAGTGT-CCCAGTCGGAAGATCTGACTCCGTAGCACATTTCTTTTGAATGTCATGTTGGTGCTC-AGAAAGCTTCAGATTTTGGAGAATTTCAGATTTTTGTATTAGGGATGTTCAACc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627350 411 - 91010382 agtgatccacctgtcttgacctccccaacaggcatgaaccaacacgctcagccAGTTTTAGTGATTTTTCAAGAAATACATACTCATTTCAGAAAGTACAAAGAGATTGAAATAAGAGCTCACTAAC----CAGAGACGACCCATTATGGTTTAAATTTCTTTGTGTGTGTGCCTACCTTTTCCTGTGTGTGCATTTTTAATATACA--------attccttctctgaaatccttgggaccagaagtgtttcggatttcaggcttgttcagactttggaatatatctgcatgatacttactgtctgagtgtccccagtcggaagatctgactccatagcacatttcttttgaatgtcatgttggtgctc-agaaagcttcagattttggagaatttcagatttttggattagggatgttcaacc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 164641 415 - 204313951 --tgatccacctgccttggcctccccaaCAGGCATGAACCAACATGGCTGGCTAGTTTTGGTGATTTTTCAAGAAATACATACTCATTTTAGAAAGTACAAAGAGACTGAAATAAGAGCTCAGTAACAGAGAGGAGAGGGCCCATTATGGTTTTGAG---TGTGTGTGTGTGTCTACCATTGACTCTGTGTGCATATTTAGTACAcagcttgagtgttcc-tatctgaaatccttggggccagcagtgttttggatttccggcttgttcagactttgga--atatttgcattacacttactgtctgatcatccctaattggaagatctgactccatggtgcatttcttttgaatgtcatattggtgctc-agaaagtttcaagttttggagaatttcagatttttggattagggatgttcaacc i calJac3.chr2 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e canFam3.chr34 30187882 149 - 42124431 I a score=583326.000000 s hg38.chr3_KI270935v1_alt 55951 217 + 197351 tatataaatatttactttgaagtagaaaaact----ggaagtagatagtttaaaca----tgaagtgtcttggtatagacaagggttctcccacttttcatgatgggagcatttttgtaaagcaaagcactgagaatctggtacagtgtcattttcgttgctctgttccactctaccgatctgccgtcatttaca------gtcccc-tgttgcgcatg--tagatcatttttg s panTro4.chr3_GL389630_random 20538 213 + 103936 tatataaatatttactttgaagtagaaaaact----ggaagtagatagtttaaaca----tgaagtgtcttggtatagacaagggttctcccacttttcatgatgggagcatttttgtaaagca-----ctgagaatctggtacagtgtcattttcattgctctgttccactctacagatctgccgtcacttaca------gtccccctgttgcgcatg--tagatcatttttg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199702383 212 + 202140232 tgtataaatacttactttgaagtagaaaaact----ggaagtagatggtttaaaca----tcaagtgtgttggtatagacaagtgttctcccacttttcgtgatgggagtgtttttgtaaagca-----ctgagaatctggtacagtgtcattttcattgttccgttccactctacggatctgccgtcatttaca------gtcccc-tgttgcgcatg--tagatcatttctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120801414 211 + 123690457 tatataaatatttactttgaagtggaagaact----ggaagtagatagtttaaaca----tgaagtgtcttggtatagacaagggttctcccactctacatgacgggagcatttttgtaaagca-----ctgagaatctggtacagtgtcattttcgttgctctgttcca-tctgtggatctgccatcattgaca------ctcccc-tgttgcgcatg--tagatcatttttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 21346 197 + 180491593 tatgtaaatatttactttg---------aact----ggaagtaggtagtt-----a----taaagtgtcttggtatagacaagggttctcccacttttcatgacgggagcatttttgtaaagca-----ctgagaatctggcacagggtca-tttcgtcgctctgttccactctagggatctgccgccatttaca------gtcccc-tgttgcgcatg--tagatcatttttg i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296407 202 - 181584905 tATGTAAATATTTACTTTG---------AACT----GGAAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTATAGACAAGGGTTCTCCCACTTTTCATGACGGGAGCATTTTTGTAAAGCA-----CTGAGAATCTGGCACAGGGTCA-TTTCGTCGCTCTGTTCCACTCTAGGGATCTGCCGCCATTTACA------GTCCCC-TGTTGCGCATG--TGGAACATTGTTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180619 202 - 174439528 tatgtaaatatttactttg---------AACT----GGAAGTAGGTAGTTTAAATA----TAAAGTGTCTTGGTATAGACAAGGGTTCTCCCACTTTTCATGACCGAAGCATTTTTGTAAAGCA-----CTGAGAATCTGGCACAGGGTCA-TTTCGTCGCTCTGTTCCACTCTACGAATCTGCCGCCATTTACA------GTCCCC-TGTTGCGCATG--TGGAACATTGTTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627761 201 - 91010382 tATGTAAATATTTACTTTG---------AACT----GGAAGTAGGTAGTTTAAACA----TACAGTGTCTCGGTATAGACAAGGGTTCTCCCACTTTTCATGACCG-AGCATTTTTGTAAAGCA-----CTGAGAATCTGGCACAGGGTCA-TTTCGTCGCTCTGTTCCACTCTACGGATCTGCCGCCATTTACA------GTCCCC-TGTTGCGCATG--TAGATCATTTTTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 165056 216 - 204313951 tATATAAATATTTACTTTGAAGTAGAAAAACT----GGAAGTAGATAGCTTGAACA----TAAAGTGTTTTGGTATATACGAGGGTTCTCCCACTTTTCATGATGGGAGCATTTTTGTACAGCA-----CTGAGACTCTTGCACAGTGTCATTTTCGGGGCTGTGTTCCACCCTGCAGACTTGTCCTTATTGACA----CGGTCCCC-CGTCGTGCATGACAGTGTCATTTTCG i calJac3.chr2 C 0 I 720 s canFam3.chr34 30188031 207 - 42124431 tatataaatac--------aaatagaaaaacttttggtaaatacagggtttaagcataattaaagaatgataatatatgcaaggttt----cacttctt-------gagcatttgtgtaaagca-----tcaagaattttatacattgttattttagttgctgtatttcattacatggagttaccataatttacatacctggtcccc-tattgtacgtt--taggtcatttttg i canFam3.chr34 I 149 C 0 e mm10.chr13 46098087 262 - 120421639 I a score=73636.000000 s hg38.chr3_KI270935v1_alt 56168 29 + 197351 aatttgttattggaaaatactgcagcaaa--- s panTro4.chr3_GL389630_random 20751 29 + 103936 aatttgttattggaaaatactgcagcaaa--- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199702595 29 + 202140232 aatttgttactggaaaatactgcggcaaa--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120801625 29 + 123690457 aatttgttactggaaaatactgcagcaaa--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 21543 29 + 180491593 aatttgttattggaaaagactgcggcaaa--- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296609 29 - 181584905 AATTTGTTATCGGAAAAGACTGCGGCAAA--- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180821 29 - 174439528 AATTTGTTATCGGAAAAGACTGCGGCAAA--- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627962 29 - 91010382 AATTTGTTATTGGAAAAGACTGCGGCAAA--- i chlSab2.chr4 C 0 C 0 s canFam3.chr34 30188238 31 - 42124431 agtttgttactgaaaaatactcca-caatgag i canFam3.chr34 C 0 C 0 e mm10.chr13 46098087 262 - 120421639 I e calJac3.chr2 165272 720 - 204313951 I a score=78676.000000 s hg38.chr3_KI270935v1_alt 56197 31 + 197351 ------taccttAAAGTTCACA-----TGCC-GTAAATCTACT s panTro4.chr3_GL389630_random 20780 31 + 103936 ------taccttAAAGTTCACA-----TGCC-GTAAATCTACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199702624 31 + 202140232 ------taccttAAAGTTCACA-----TGCC-GTAAATCTACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120801654 31 + 123690457 ------taccttAAAGTTCACA-----TGCC-GTAAATCTACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 21572 31 + 180491593 ------tacttttaagttccca-----tgcc-attaatctact i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296638 31 - 181584905 ------TACCTTTAAGTTCCCA-----GGCC-GTAAATCTACT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180850 31 - 174439528 ------TGCCTTTAAGTTCCCA-----GGCC-GTAAATCTACT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89627991 31 - 91010382 ------TACCTTTAAGTTCCCA-----GGCC-ATAAATCTACT i chlSab2.chr4 C 0 C 0 s mm10.chr13 46098349 32 - 120421639 ------TGTCTTAAAGTTCTCA-----TGCCTGTAAATGTACT i mm10.chr13 I 262 C 0 s canFam3.chr34 30188269 42 - 42124431 tatttgtGATTTTAAGTTCCTGAAATTTGTC-TACAAATAACT i canFam3.chr34 C 0 C 0 e calJac3.chr2 165272 720 - 204313951 I a score=1911.000000 s hg38.chr3_KI270935v1_alt 56228 1 + 197351 T s panTro4.chr3_GL389630_random 20811 1 + 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199702655 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120801685 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 21603 1 + 180491593 t i rheMac3.chr6 C 0 C 0 s mm10.chr13 46098381 1 - 120421639 T i mm10.chr13 C 0 C 0 s canFam3.chr34 30188311 1 - 42124431 T i canFam3.chr34 C 0 C 0 e calJac3.chr2 165272 720 - 204313951 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=859479.000000 s hg38.chr3_KI270935v1_alt 56229 531 + 197351 TTATAGTTAAAATTTTTCAAAAGGAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTTACCACTGA--CTTCTTTTCAAGGTCACTGTGGAATATAGACCCATAATTGACAAAACTTTGAACGAGGCTGACTGTGCCACTGTCCCCCCAGCCATTCACTCCTACTGATGAGACAAGATGTGGTGATGACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCAATGTCATAACTGTCTTTATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATTGAAG-GGGGATTGGC-ACCCAGTGGCCG----------------------------GGGA--GCG----TGGCACTTACCTTTGTCCCTTGCTTCATTCTTGTGACAAGATAAAACTGGGCACAGCTGTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAAATCCATTTAAAATATTTTCCTGTTATGACTT--GTCATATTTGTTGACCTAAAA-ATCAAATGTAATTATCTTTGTATTCTGTTACATCAAAATCCAGATATTTTGTTG s panTro4.chr3_GL389630_random 20812 531 + 103936 TTATAGTTAAAATTTTTTAAAAGGAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTTACCACTGA--CTTCTTTTCAAGGTCACTCTGGAATATAGACCCATAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTACGTATAATAGCTCATACATGTGTCCATGTCATAACTGTCTTTATACGCTTCTGCACTCTGGGGAAGAAGGAGTA-CATTGAAG-GGGGATTGGC-ACCCAGTGGCCG----------------------------GGGA--GCG----TGACACTTACCTTTGTCCCTTGCTTCATTCTTGTGACAAGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAAATCCATGTCAAATATTTTACTGTTATGACGT--GTCATATTTGTTGACCTAAAA-ATCAAATGTAATTATCTTTGTATTCTGTTACATCAAAATCCAGATATTTTGTTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199702656 559 + 202140232 TTATAGTAAAAAATTTTCAAAAGGAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTACCTTACCCCTGACTCTTCTTTTCAAGGTCACCCTGGAATATAGACCCGTAATTGACAAAACTTTGAATGAGGCTGACTGTGCCGCCATCCCCCCAGCCATTCACTCCTGCTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTATGTATAATAACTCATGTATGTGTCCATGTCATAAGTGTCTTCATACGCTTCTGCACTCCAGGGAAGAAGGAGTA-CATTGAGG-GGAGATTGGC-ACCCAGTGGCCGGGAG--CTTGCCAGGAACCCAGTGGCCAGGGA--GCG----TGGCACTTACCTTTGTCCCTTGCTTCATTCTTGTGACATGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAAATCCATTTACAATATTTTACTGTTGTGACTT--GTCATATTTGTTGACCTAAAA-ATCAAATGTAATTGTCTTTGTATTCTGTCACATCAAAATCCAGATATTTTGTTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120801686 561 + 123690457 TTATAGTTAAAATTTTTCAAAAGGAACACAAGAGATGGCTTTTTGTACATTTTTGTGC-----TTAACTTACCACTGACTCTTCTTTTCAAGGTCACTCTGGAATATAGACCCATAATTGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAATCAGCTTTTGTAATTATGTGTAATAGTTCATGCATGTGTCCATGTCATAACTGTCTTTATACGCTTCTGCACTCCAGGGAAGAAGGAGTA-CATTGAAG-GGAGATTGGC-ACCCAGTGTCCGGGAG--CTTGCCAGGAACCCAGTGGCTAGGGA--GCG----TGGCACTTACCTTTGTCCCTTGCTTCATTCTTGTGACACGATAAAACTGGGCACAGCTCTTAAATAAAATATAAATGAACAAACTTTCTTTTATTTCCAAATCCATTTAAAATATTTTACTGTTGTGACTTTAGTCATATTTGTTGACCTAAAT-ATCAAATGTAATTATCTTTGTATTCTGTCACATCAAAATCCAGATATTTTGTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 21604 556 + 180491593 ttatagtttaaatttttcaaaaggaatacatgagatggctttttgtacatttttaTG----------CTTACCACTGATTCTTCTTTTCAAGGTCACTCTGGAATATAGACCCGTAATCGACAAAACTTTGAACGAGGCTGACTGTGCCACCGTCCCCCCAGCCATTCGCTCCTACTGATGAGACAAGATGCAGTGATAACAGAATCAGCTTTTGTAATTATGTATAATAGCTCATGCATGTGTCCATGTCATAACTGCCTTTATACGCTTCTGCACTCCGGGGAAAAAGGAGTA-CATTGAAG-GGAGATTGGC-ACCCAGTGGCTGGTAG--CTTGCCAGGAACCCAGTGGCCAGGGA--ACG----TGGCACTTACCTTTGTCCCTTGCTTCATTCTTGTGAGATGATAAAACTGGGCACAGCTCTTAAATAAAATACAAATGAACAAACTTTCTTTTATTTCCAAATCCATTTAAAATATTTTACTATTATGACTTTAGTCATATTTGTTGACCTAAAA-ATCAAATGTAATAATCTTTGTATTCTGTTACATCAAAATCCAGATATTTTGTTG i rheMac3.chr6 C 0 C 0 s calJac3.chr2 165992 547 - 204313951 TTATAGTTAAAAATTTTCAAAAGGAACACAAGAGATGGCTATTTGTACATTTTTGTGC-----TTAACTTACCGCTGACCCTTCTTTTCAAGGTCACTTTGGAATATAGACCTGTAATCGACAAAACTTTGAACGAGGCTGACTGCACCTCCGTTCCCCCGGCCATTCGCTCCTACTGATGAGACAAGATGCGGTGATGACAGAAGCAGCCTTTGTAATTATGTATCATAGCTCATGCATGTGTTCATGTCGTAACTGTCTTTATAAGCTTCTGCACTGGGGTGAAGAGGGAGTC-CATTGAAG-GGAGATGGGC-ACCCAGTGGCCGGGAG--CCGGCCA---------------GGGA--CCG----CAGCACTTACCTTTGTCCCTCCCTTCATTCTTGTGAGACCATAAAACTGGACACAGCCCTAAAATAAAACATAGATGAACAAACTTTCTTTTATTTCCACATCCACTTAAAATATTTTACCGTCATGACTTTAGTCATATTTGTTGACCTAAAATATCAAATGGAATTATCTTTGCATTCTGTTACATCAAAATCCAGAGATTTTGTTG i calJac3.chr2 I 720 C 0 s mm10.chr13 46098382 520 - 120421639 -GATGGCCTAA--TTTTACAGAAGCACAGAAGAAATGGCTGTTTGTAAATATTCATGC-----CTTGATTCACCCCGACTCTTTTCTCCAAGGTTACTTTGGAGTACAGACCTGTTATCGACAAGACCTTGAATGAGGCTGACTGTGCCACCGTACCTCCTGCTATCCGCTCCTACTGATGAAACCTGA-----CAGCTACAGGACCAGCTTATGTGATTATATAGCATAGCTTACCTGCGTTTCCCC-TCATACTTGTCTTGGTAAAATTCTGCTCTC--ATGAACAAGGAGTC-ACTTCA----TAGATTGTG-ATCAACAGCTTGGTAGTACTTGCTGTAA------------GGGATTGAG----TTGCGCCAGACTTTGTCT----CTTTATTCTTGTGCAGTGATAAAACTGG-CATAATTCTTAAGTGAAGTACAAATGAGCAA----TCTTTTATTTCCAAA------TAAAACCATGTAGTAGTG-GATTTTAGTTCTATCTATTGGTCTGAAACAGCAAATATAATTTTCTTC---CGCTGTCTAGCTGCAGCACAAGTATTGTTTT- i mm10.chr13 C 0 C 0 s canFam3.chr34 30188312 519 - 42124431 TTATAGT--GAATTTTTCAAAAAATATACAAGCGAATACTGTTTTTATGTTTTTCCACAAATTTTAACTTACTGTAGATTCTTCTTTTTAAGGTCTCATTGGAATATAGACCTGTGATCGACAGAACTTTAAATGAGGCTGACTGTGCCACGGTCCCTCCAGCCATTCGCTCCTACTGATGAGACCAGA------GTTGAC-----CAGCTTTTGTAATTATGTATAATAGCTCATGCGTGTGTTCATATCCTAATTACCTTTTTAAAATCCTGTACTCAAGTGAATAAGGAGTGTCATTGGAATAGAGATCATCTACCCGGTAGCCAGAAG--CTTGCTAGTAA-TCAACAGCCAGGAA--GTGTGAATGAAGCTTACCTTTTGCTT---CATCATCCTTGTGAAATAATAAAACTGGGCATGATTCTTAAATAAAGCATAAATTACAAA-----CTTCTATTTCCAAGTCCATTTAAGAACTTGTACTATT-TGACTTGAGGCATGT-TGTTGACCTGAAA-------------------------------GATCAATATCCAGAAATTTTGTTG i canFam3.chr34 C 0 I 1339 e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=25276.000000 s hg38.chr3_KI270935v1_alt 56760 41 + 197351 CAGtttctttt----------ttttttttttttttttgagacagggt--------tggt s panTro4.chr3_GL389630_random 21343 44 + 103936 CAGtttc---------------tttttttttttttttgagaccaggttggtgcagtggt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199703215 42 + 202140232 TAGtt-----------------tttctttttttttttgagacaggatcggtgcagtggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120802247 41 + 123690457 TAGt------------------ttcttttttatttttgagacaggatcggtgcagtggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22160 57 + 180491593 TGGTTTCtttttt-ttcttc-tttcttttctttttttgagacaggatcagtgcagtggt i rheMac3.chr6 C 0 C 0 s calJac3.chr2 166539 59 - 204313951 CAGTTTCttctttcttcttcttcttcttcctttttttgagacaggatcagtgcagtggt i calJac3.chr2 C 0 C 0 s mm10.chr13 46098902 29 - 120421639 ----------------------GTTCATTCTCTGTGTGAAGTAGGGCAGGT-------- i mm10.chr13 C 0 I 696 e canFam3.chr34 30188831 1339 - 42124431 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=521541.000000 s hg38.chr3_KI270935v1_alt 56801 439 + 197351 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcccgactcagccttctaagtagctggggctacaggtgtgcaccaccacgcccagctcatttattttgtaattgtagggacagggtctcactttgttgcctaggctggtctcaaactgctgggcttaagtgatcgttcctccttggcctcccgaagtgctggaattataggtgtgaaccaccatgtctggcc---TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCT-------------------------TTTCCTCCTTTTTTCTTAGCAGATGGTTTGCTAGGTGAGTGTGTCCTCGATTCTTTAAATcaggggtccccaatccccaggccacagattgtt-ccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagccagccagtgagcatta s panTro4.chr3_GL389630_random 21387 439 + 103936 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcccaactcagccttctgagtagctggggctacaggtgtgcaccaccatgcccagctcatttattttgtaattgtagggacagggtctcactgtgttgcctaggctgatctcaaactgctgggctcaagtgatcgttcctccttggcctcctgaagtgctggaattataggtgtgaaccaccatgtctggccTTATTGTAGTTTATTTCTAAGTTCAAATTAATGTTTGTGCT-------------------------TTTCCTCCTTTTTTCTTAGCAGATGGTTTGCTAG----GTGTGTCCTCGATTCTTTAAATcacgggtccccaatccccaggccacagattgttaccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagccggccagtgagcatta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199703257 438 + 202140232 gcagtctcagctcactgcagcctcaaactcctgggcagctcaggtgatcttcccgactcagccttctgagtagttggggatacaggt-tgtgccaccacgcccagctcatttattttgtaattgtagggacagggtctcactgtgttgcctaggctggtctcaaactcctgggctcaagtgatcgtccctccttggcctcccgaagtgccggaattataggtgtggaccaccatgcctggcc---TTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCC-------------------------TTTCCTCC-TTTTTCTTGGCAGATGGTTTACTAGGTGAGTGTGTCCTCGATTATTTAAATcaggggtccccaatccccaggccacagattgttaccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagccggccagtgagcatta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120802288 442 + 123690457 gcagtctcagctcactgcagcctcaaactcctgggcagctccggtgatcttcccgactcagccttctgagtagttggggctacaggtgtgcaccaccacacccagctcatttattttgtaattgtagggacagggtctcactgtgttgcctaggctggtctcaaactgctgggctcaagtgatcgtccctccttggcctcccaaagtgctggaattgtaggtgtgaactaccatgtttggccTTGTTGTAGTTTATTTCTAAGTTCAAATTAATGTTGATGCT-------------------------TTTCCTCC-TTTTTGTTGGCAGATGGTTTACTAGGTGAGTGTGTCCTTGATTATTTAAATcagtggtccccaatccccaggccacagatcattaccagtccatggcctgttaggaaccaggccacacagtaggaggtgagcagccggccagtgagcatta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22217 467 + 180491593 gcagtctcagtttactgcagcctcaaactcctgggcggctcaagtgatcttcccaacccagccttctgagtagttggggctacaggtgtgcaccaccatgcccagctaatttattttttaattgtagggacagggtctcactatgttgcctaggctggtctcaaactcctgggctcaggtgatccttcctccttggcctcccaaagtgctggaattataggtgtgaaccaccgtgcctggccTTATTGTAGTTTATTTCTAAGTTCAAATTAATGTTGGTGCCTGAGAGCGAATGGAGAAAACTAGTATTTCCTCC-CTTTTCTTGGCAGATGGTTTACTAGGTCAGTGTGTCCTCGATTATTTAAATcaggggtccccaatccccaggccacaaattggtaccactccatggcctgttaggaaccgggccgcacagtagggggtgggcagctggccagtgaacatta i rheMac3.chr6 C 0 C 0 s calJac3.chr2 166598 465 - 204313951 gcaatctcagctcgctgcagcctcagactcctgggaggctcaggtgatcctcccagcccagcctcctgagcagttggggctataggtgtgcaccaccatgcccagccagtttattttttaattgtagaaac--ggtctcaccatgttgcctagcctggtctcaaactcctgggttcaagtgatcctccatccttggcctcccaaagtgctggaatgataggtgtgaaccaccatgcctggACTTGATGTTGTTTATTTGTAAGTTCAAATTGACGTTGGTGCCTGAGAGCAGATGGAGAAAATGAACATTTCCTCC-TTTTTCTTGACAGACGGTTTACTAGGTAAGCGTGTCCTCGATTATTTAAATcagggctccccagtccctaggccacagattgttaccagcccgtggcctgttaggaaccagaacacacagcaggaggtgagcagcaggccagtgagcctga i calJac3.chr2 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=110330.000000 s hg38.chr3_KI270935v1_alt 57240 146 + 197351 ctgtgtgagctccgccccctgccagagcattactgtgtgagctccaccccctgccagagcaTTACTGTGTGAGCTCCGCCCCCTGCCAgagcattactgtgtgagctccgc------------------------------cccctgtcagagcaTTACTGTGTGAGCTCCGCCCC s panTro4.chr3_GL389630_random 21826 146 + 103936 ctgtgtgagctccgccccctgccagagcattactgtgtgagctccgccccctgccagatcaTTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGC------------------------------CCACTGCCAGAGCATTACTGTGTGAGCTCCGCCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199703695 144 + 202140232 ctgtgtgagctccgccccctgccagagcattactgtgtgagctccgccccctgccagatcaTTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTTCGC------------------------------CTCCTGTC--ATCATTACTGTGTGAGCCCCGCCCC i ponAbe2.chr3 C 0 I 14 s nomLeu3.chr11 120802730 143 + 123690457 ctgtgtgagttcagccccctgtcagagcattac--tgtgagctccacccccagccagattattattgtctgagctccgcctcctgtcagagcattactgtctgagctccgc------------------------------cccctgtcagatcaTTACTGTGTGAGCTCCGCCC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22684 176 + 180491593 ctgtgtgagctccgccccctgccagagcattactctgtgagctccaccttctgtcagatcattactgtgtgagctcctcctcctgtcagatcaTTACTGTGTGAGCCCCGCCTCCGTCAGATCATTACTGTGTGAGCCCCGCCCCCGTCAGATCATTACTGTGTGAGCCCCGCCCC i rheMac3.chr6 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=4255.000000 s hg38.chr3_KI270935v1_alt 57386 18 + 197351 CTGCCAGAG-ATTACTGTG s panTro4.chr3_GL389630_random 21972 19 + 103936 CTGCCAGAGCATTACTGTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120802873 17 + 123690457 CTGTCATc--attactgtc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22860 18 + 180491593 -CGTCAGATCATTACTGTG i rheMac3.chr6 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C e ponAbe2.chr3 199703839 14 + 202140232 I a score=71453.000000 s hg38.chr3_KI270935v1_alt 57404 112 + 197351 TGAGCTCCGCCCCCTGGCAGAGCATTACTG------------------------------TGTGAGCTCCGCCCCCTGGCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAG-ATTACTGTGTGAGCTCCGCCCCCTGT s panTro4.chr3_GL389630_random 21991 143 + 103936 TGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199703853 109 + 202140232 TGAGCTCCGCCCCCTTCCAGAGCATTACTG------------------------------TGTGAGGTCCG-CCTCTGCCAGAGCATTACTGTGTGAGCTCCG-CCTCTGCCAGAACATTA--GTGTGAGCTCCGCCCCCTGT i ponAbe2.chr3 I 14 C 0 s nomLeu3.chr11 120802890 113 + 123690457 tgagctccgcctcctgtcagatcattactg------------------------------tgtgagctccgcctcctgtcaaatcattactgtctgagctccgccccctgtcagatcaTTACTGTGTGAGCTCCACCTCCTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22878 110 + 180491593 TGAGCCCCGCCCCC-GTCAgatcattactg------------------------------tgtgagctccgcctcctgtcagatcaTTACTGTGTGAGCCCCG-CCCCCGTCAGATCATTACTGTGTGAGCCCCGCCCCCGT- i rheMac3.chr6 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=112683.000000 s hg38.chr3_KI270935v1_alt 57516 284 + 197351 CAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGTATTACTGTGTGAGCTCTGCCCC--GTCAGAGCATTGCTGTGTGAGCTCCGCCCCCTGCCAGAGTATTACTGTGTGAGCTCCACCCCCTGTC--AGCATTACTGTGTGAGCTCCACCCCCGTC---GGCATTACTGTGTGAGCTCCGCCCCCTGCCAgagcattactgtgtgagctctgccccctgtcagagcaTTGCTGTGTGAGCTCCGCCCCCTGCCAGAGTATTACTGTGTGAGCTCCACCCCCTGTC--AG s panTro4.chr3_GL389630_random 22134 293 + 103936 CAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCGCCGCCCCCTGCCAGAGCATTACTGTGTGAGCGCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120803003 253 + 123690457 --CagcattactgtgtgagctctgcctcctgtcagatcattactgtgtgagctccgccccctgtcaaatcattactgtctgagctccgccccctgtcagatcaTTACTGTGTGAGCTccgcctcctgtc----------------------------------agcattactgtctgagctctgcctcctgtcagatcaTTACTGTGTGAGCTACGCCCCCTGTCAAATCATTACTGTCTGAGCTCCGCCCC--GTCAGATCATTACTGTGTGAGCTCCGCCTTCTGTC--ag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 22988 287 + 180491593 CAgatcattactgtgtgagctccgcctcctgtcagatcaTTACTGTGTGAGCCCCGCCTCC-GTCAgatcattactgtgtgagctccgcctcctgtcagatcattactgtgtgagctcctcctcctgtcagatcaTTACTGTGTGAGCCCCGCCTCCGTCAG-ATCATTACTGTGTGAGCCCCGCCCCC-GTCAgatcattactgtgtgagctccgcctcctgtcagatcaTTACTGTGTGAGCCCCGCCTCC-GTCAgatcattactgtgtgagctcctcctcctgtc--ag i rheMac3.chr6 C 0 I 161 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C e ponAbe2.chr3 199703962 0 + 202140232 C a score=160712.000000 s hg38.chr3_KI270935v1_alt 57800 237 + 197351 CATTACTGTGTGAGCTCCACCCCC-GTC--AGCATTACTGTG---------------------------TGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTAC--TGTGAGCTCTGCCCCCTGTCA--TCATTACTGTGTGAGCTCCGCCCCCTGTCA--TCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCCCCTGCCAGAGCATTACTGTGTGAGCTCCGCCC s panTro4.chr3_GL389630_random 22427 244 + 103936 CATTACTGTGTGAGCTCCGCCCCCTGTC--ATCATTACTGTG---------------------------TGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCTCCGCCCCCTGCCAGGGCATTACTGTGTGAGCTCCGCCCCCTGCCATATCATTACTGTGTGAGCTCCACCCCCTGCCAGATCATTACTGTGTGAGCTCTGCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199703962 263 + 202140232 CATTAC--TGTGAGCCCCGCCCCC-GTC--ATCATTACTGTGTGAGCCCCGCCCCCATGAGATCATTACTGAGCTCCGCCCCCTTCCAGAGCATTACTGTGTGAGGTCCG-CCTCTGCCAGAGCGTTAC--TGTGAGCTCTGTCCCCTGCCAGAACATTAGTGTGTGAGCTccgctccctgtca--tcattactgtgtgagctccgccccttgtcagatcaTTACTGTGTGAGCTCCGCCCCCTGTCAgatcattactgtgtgagctccgccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120803256 242 + 123690457 cattactgtctgagctctgcctcctgtcagatcattactgtg---------------------------tgagctccgccccctgtcaaatcattactgtctgagttccgccccctgtcagatcaTTACTGTGTGAGCTccgccccctgtca--gcattactgtctgagctccgcctcctgtcagatcaTTAC--TGTGAGCTCTGCCCCCTGTCAAATcattactgtctgagctccgccccctgtcagatcaTTACTGTGTGAGCTCCGCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 23436 242 + 180491593 cattactgtgtgagctcctcctcctgtcagatcaTTACTGTG---------------------------TGAGCCCCGCCCCC-GTCAgatcattactgtgtgagctcctcctcctgtcagatcaTTACTGTGTGAGCCCCGCCCCC-GTCAGATCATTACTGTGTGAGCCCCGCCTCC-GTCAgatcattactgtgtgagctcctcctcctgtcagatcaTTACTGTGTGAGCCCCGCCCCC-GTCAgatcattactgtgtgagctccgcct i rheMac3.chr6 I 161 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=44640.000000 s hg38.chr3_KI270935v1_alt 58037 133 + 197351 GCTGTC--ATCATTACTGTGTGAGCTCCGCCCCC----TG-----TCATTACTGTGTGAGCTCCGCCCCCTGTCATATCATTACTGTGTGAGCTCCGCCCCCTGTCATATCATTAT--TGTGagctccg---------------------------------------------------------cccctgtcatatcattg s panTro4.chr3_GL389630_random 22671 192 + 103936 CCTGTC--GTCATTACTGTGTGAGCTCCGCCCCTGTCATG-----TCATTACTGTGTGAGCTCTGCCCCCTGTCTTATCATTACTGTGTGAGCTCCGCCCCCTGTC--ATCATTAC--TGTGAGCTCCGCCCCCTGTCAGAGCATTACTGAGCTCTGCCCCGTCCTCATTTCTGTGTGAGCTCTGCCCCCTGTCATATcattg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120803498 133 + 123690457 -CTGTC--ATCATTACTGTCTGAGCTCCGCCTCC----TGTC--ATCATTACTGTGTGAGCTCCGCCCCCTGTC--AGCATTACTGTGT--GCCCCG-CCCCTGTCAGATcattactgtgtgagctccg--------------------------------------------------------ccccctgtcagatcatta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 23678 142 + 180491593 cctgtcagatcattactgtgtgagctcctcctcc----tgtcagatcattactgtgtgagctccgcctcctgtcagatcattactgtgtgagctccgcctcctgtcagatcaTTACTGTGTGAGCCCCG---------------------------------------------------------CCTCCGTCAgatcatta i rheMac3.chr6 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167063 0 - 204313951 C e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C e ponAbe2.chr3 199704225 0 + 202140232 C a score=13852.000000 s hg38.chr3_KI270935v1_alt 58170 17 + 197351 ctgtgtgagctccgcct s panTro4.chr3_GL389630_random 22863 17 + 103936 ctgtgtgagctccgcct i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120803631 17 + 123690457 ctgtgtgagctccgcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 23820 17 + 180491593 ctgtgtgagctccgcct i rheMac3.chr6 C 0 C 0 s calJac3.chr2 167063 16 - 204313951 ctatgtgagctccgcc- i calJac3.chr2 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C e ponAbe2.chr3 199704225 0 + 202140232 C a score=227136.000000 s hg38.chr3_KI270935v1_alt 58187 201 + 197351 cctgtcagatcagtggtggcattagattctcataggagtg-gaatcctgttgtgaactgcgcatgagaaggatctaggttatgccccgcttatgagaatctaatactgatgatctgagatggaaccgtttcatctccaa---------accatccccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa s panTro4.chr3_GL389630_random 22880 201 + 103936 cctgtcagatcagtggtggcattagattctcataggagtg-gaaccctgttgtgaactgcgcatgcgaaggatctaggttatgtcccgcttatgagaatctaatactgatgatctgagatggaaccgtttcatctccaa---------acgatccccacacttgtcagtggaaaaagtgtcttccgtgaaaccagtccctggtgccaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199704225 199 + 202140232 cctgtcagatcagtggtggcattagattct--gaggagtg-gaaccctattgtgaactgtgcatgcgaaggatctaggttatgccccacttaggagaatctaatgcggatgatctgaggtggaaccgtttcatctccaa---------accattcccacacttgtcagtggaaaaagtgacttccatgaaaccagtccctggtgccaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120803648 201 + 123690457 cctgtcaggtcagtggtggcattagattctcataggagtg-gaaccctattgtgaactgtgcatgccaagggtctaggttatgcgctgcttatgagaatctaatgctgctgatctgaggtggaaccgtttcatctccaa---------accatccccacacttgtccgtggaaaaagtgtcttccatgaaaccagtccctggtaccaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 23837 210 + 180491593 cctgtcagatcagtggtggcattagattctcataggagtg-gaaccctgttgtgaactgcgcatgcgaaggatctaggttatgcgccgcttttgagaatttaatgctcatgatctgaggtggaaccgtttcatctccagaccatccccaccatccccacacttgtccatggaaaaagtgtgttccgtgaaaccagtccctggtgccaaaac i rheMac3.chr6 C 0 C 0 s calJac3.chr2 167079 197 - 204313951 -ctgtcagatcagcggtggcattagattctcctgggagcacaaaccctactgtgaactgcacattcgagggatctgggttatgc-----------gagtctaatgccgatgatctgaggtggaaccgtttcgtccccaaaccatcc--cccatccccacacttgtccctggaaaaagtgtcttccatgaaaccagtccctggtgccagaaa i calJac3.chr2 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e chlSab2.chr4 89628022 0 - 91010382 C e macFas5.chr6 180296669 0 - 181584905 C e papAnu2.chr6 173180881 0 - 174439528 C a score=749347.000000 s hg38.chr3_KI270935v1_alt 58388 257 + 197351 ggttagggactgccgGTTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTGCTTTATTTTTAGGCTGTTCTTTTTAGAGAGCAATGACAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtatttgccattgctttcaatggtaaaaggcacaattacttttgcagcaacttaaTATTATAAATTTGTT-CTTAAAGTGTATTTTTGATAAGAAA s panTro4.chr3_GL389630_random 23081 258 + 103936 ggttagggactgcCAGTTTAAATAACCAAATGCTAAAAGAACTGGCATAGAGGT-AAATGGGCTGCTGCTTTATTTTTAGGCTGTTCTTTTTAGAGAACAATGACAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcagtttttgccattgctttcaatggtaaaaggcacaattacttttgcagcaacttaaTATTATAAATTTGTTCCTTAAAGTGTATTTTTGATAAGAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199704424 256 + 202140232 ggttagggatcgcCAGTTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTGCTTTATTTTTAGGCTGTTGTTTTTAGAGAACAATGACAGTTATTTCCAAG--TGTCATTAGAAAATAATAttaggttggagcaaaagtaattgcggtttttgctattgctttcaatggtaaaagccacaattacttttgcaccaacttaaTATGATACATTTGTTCCTTAAAGTGTATTTTTGATAAGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120803849 258 + 123690457 ggttagggaccgcCAGTTTAAATAACCAAATGCTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTACTTTATTTTTAGGCTGTTGTTTTTAGAGAACAATGACAGTTATTTCCAAGTTTGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcggtttttgtcattgctttcaatggtaaaagccacaattacttttgcaccaccttaaTATGATAAATTTGTTCCTTAAAGTGTATTATTGGTAAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 24047 258 + 180491593 ggttagggaccgcCAGTTTAAATAGCCAAATACTAAAAGAACTGGCGTAGAAGTAAAATGGGCTGCTGCTTTATTTTTAGACTGTTCTTTTTAGAGAATAATGACAATTATTTCCAAGTTCGTCATTAGAAAATAATAttaggttggtgcaaaagtaattgcagtttttgccattactttcaatggtaaaagccac-attacttttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAGAAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296669 254 - 181584905 GGTTAGGGACCGCCAGTTTAAATAACCAAATACTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTTCTTTATTTTTAGGCTGTTCTTTTTAGAGAACAATGACAATTATTTCCAAGTTTGTCATTAGAAAATAGTAttaggttggtgcaaaagtaattgcagttttggccattactttcagtggtaaaagccac----aattttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAGAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173180881 254 - 174439528 GGTTAGGGACCGCCAGTTTAAATAACCAAATACTAAAAGAACTGGCATAGAAGT-AAATGGgctgcttctttatttttaggCTGTTCTTTTTAGAGAACAATGACAATTATTTCCAAGTTTgtcattagaaaataatattaggttggtgcaaaagtaattgcagttttggccATTACTTTCAGTGGTAAAAGCCAC----aattttgcaccaacttaatatgaTAAATTTGTTCCTTAAAGtgtatttttggtaagaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89628022 254 - 91010382 GGTTAGGGACCGCCAGTTTAAATAACCAAATACTAAAAGAACTGGCATAGAAGT-AAATGGGCTGCTTCTTTATTTTTAGGCTGTTCTTTTTAGAGAACAATGACAATTATTTCCAAGTTTGTCATTAGAAAATAATAttagggtggtgcaaaagtaattgcagttttggccattactttcagtggtaaaagccac----aattttgcaccaacttaaTATGATAAATTTGTTCCTTAAAGTGTATTTTTTGTAAGAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 167276 258 - 204313951 ggttagggaccactgGTCTAAGTCACCAAATACTAAAGGAACTGAAGTAGAAGT-AAATGGGCTGCTGCTTTATTTTTGGGCTGTTCTATTTATAGAACAATGACAGGTACTTCCAAGTTTGTCATTAGAAAATAATTttaagttggtgcaaaagtaattgcggtttttgccattactttcaatggtaaaagccacaattacttttgcactaacttaaTATTATAAATTTGTTCCTTAAAGTGTATTTTTGGTAAGGAA i calJac3.chr2 C 0 I 360 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I a score=17859.000000 s hg38.chr3_KI270935v1_alt 58645 9 + 197351 GCCGTTTTG s panTro4.chr3_GL389630_random 23339 9 + 103936 GCCCTTTTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199704680 9 + 202140232 AACCTTTTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120804107 9 + 123690457 GACCTTTTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 24305 9 + 180491593 AACCTTTTG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296923 9 - 181584905 AACCTTTTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173181135 9 - 174439528 aacCTTTTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89628276 9 - 91010382 AACCTTTTG i chlSab2.chr4 C 0 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I e calJac3.chr2 167534 360 - 204313951 I a score=1115735.000000 s hg38.chr3_KI270935v1_alt 58654 436 + 197351 TTTTTCCTTCTGTTAAttttttg------tttttttcttggtcgagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcagcctccacctcctgggctccagcagtcctcccacctcagcctccctaaga------------------------------gctgagactacaggtgtgagccaccatgcctggctaattttt--------------------------------------------------------------------------------agagacagggtttcaccctcttgcccaggctggtcccaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACGTTTCCTAAGACAAGGCAGGTCTTACATTATATTTAAA-------TTTTTTTT------------AATGATGTCTTTTTTGGCAGTGCACAGCCAGAGGACAACACATCAC---ACACAAGAAA---CAGTTGTGCTCATGTGATGGGG---GCc s panTro4.chr3_GL389630_random 23348 436 + 103936 TTTTTCCTTCTGTTAAttttttg------tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtgatgtgatctcggctcactgcagcctccacctcccgggctccagcagtcctcccacctcaacctccctaaga------------------------------gctgagactacaggtgtgagccaccatgcctggctaattttt--------------------------------------------------------------------------------agagacagggtttcaccatcttgcccaggctggtcccaaactcttgggctcaagcagtcctcctgcctcagcctgccagagtattgggattataggtgtgagccactgcCAGAAAAACGTTTCCTAAGACAAGGCAGGTCTTACattatatttaaa-------tttttttt------------aatGATGTCTTTTTTGGCAGTGCACAGCCAGAGAACAACACATCAC---ACACAAGAAA---CAGTTGTGCTCATGTGATGGGG---GCc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199704689 437 + 202140232 TTTTTCCTTCATTTAAttttttg------tttttttcttggtagagacagagtcttgccatgctgtccaggctggagtgcagtggtgtgatctcggctcactgcaacctccacctcccgggctccagcaatcctcccacctcagcctccctagga------------------------------gctgagactacaggtgtgagccgccatgcctggctaattttt--------------------------------------------------------------------------------agagacagggtttcaccatcttgcccaggctggtctcaaactcctgggctcaaggagtcctcctgcctcagcctcccagaatattgggattataggtgtgagccactgcCAGAAAAACTTTTCTTAAGATAAGGCAGGGTTTACATTATATTTAGA------TTTTTTTTT------------AATGATGTCTTTTTTGGCAGTGCACAGCCAGAGAACAACACATCAC---ACACAGGAAA---CAGTTGTGCTCATGTGATGGGG---GCc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120804116 439 + 123690457 TTTTTCCTTCTATTAGttttttg----gttttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactgcagcctccacctcccgggctccagcaat-ctcccacctcaacctccctagga------------------------------gctgagactacaggcgtgagccatcatgcctggctaattttt--------------------------------------------------------------------------------agagacagggtttcaccatcttgcccaggctggtctc-aactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAACTTTTCCTAAGGCAAGGCAGGTTTTACATTATATTTAGA-------TTTTTTTT---------TTAAATGATGTCTTTTTTGGCAGTGCACAGCCAGAGAACAACACATCAC---ACACAGGAAA---CAGTTGTGCTCATGTGATGGGG---GCc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 24314 468 + 180491593 TTTTTCCTTCTATTAAttttttg----g-tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcggctcactacaacctccaccgcccgggctccagcaatcctccagcctctgcctcccaaggannnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------tgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTTTACattatatttagattttttttttttttt------------aatGATGTCTTTTTTGGCAGTGTACAGCCAGAGAATAACACATCAC---ACACAGGAAA---TAGTTGTGCTTATGTGAT-GGG---GCc i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180296932 448 - 181584905 TTTGTCCTTCTATTAAttttttg----g-tttttttcttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcagctcactacaacctccacttcccgggctccagcaatcctccagcctccgcctcccaagga------------------------------gctgagactacaggtgtgagccactatgcctggctaatttttatatttttttac--------------------------------------------------------------------agagatggggtttcaccatctcgcccaggctgagctcaaactcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccgctgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTTTACATTATATTTAGA------TTTTTTTTT------------AATGATATCTTTTTTGGCAGTGCACAGCTAGAGAACAACACATCAC---GCAGAGGAAA---CAGTTGTGCTTATGTGAT-GGG---GCc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173181144 453 - 174439528 TTTGTCcttctattaattttttgttttt-ttttttttttggtagagacagagtcttgccatgctgcccaggctggagtgcagtggtgtgatctcagctcactacaacctccaccgcccgggctccagcagtcctcccgcctcagcctcccaagga------------------------------gctgagactacaggtgtgagccaccatgcctggctaatttttatatttttttat--------------------------------------------------------------------agagactgggtttcaccatcttgcccaggctgatctcaaattcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattatgggtgtgagccactgccagAAAAAC-TTTCCTAAGGCAAGGCAGGTTTTAcattatatttaga-----tttttttttt------------aatgatatctttTTTGGCAGTGCACAGCTAGAGAACAACACATCAC---ACAGAGAAAA---CAGTTGTGCTTATGTGAT-GGG---GCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89628285 450 - 91010382 TTTGTCCTTCTATTAAttttttg----g--ttttttcttggtagagacagagtcttgtcatgctgcccaggctggagtgcagtggtgtgatctcagctcactacaacctccacttcccaggctccagcaatcctcccacctcagcctcccaagga------------------------------gctgagactacaggtgtgagccaccatgcctggctaatttttatatttttttat--------------------------------------------------------------------agagactgggtttcaccatcttgcccaggctgatctcaaattcctgggctcaagcagtcctcctgcctcagcctcccagagtattgggattataggtgtgagccactgcCAGAAAAAC-TTTCCTAAGGCAAGGCAGGTTTTACATTATATTTAGA---TTTTTTTTTTTT------------AATGATATCTTTTTTGGCAGTGCACAGCTAGAGAACAACACATCAC---GCAGAGGAAA---CAGTTGTGCTTATGTGAT-GGG---GCc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 167894 446 - 204313951 ttttttcttctattaatt-----------tttttttcttggtagagatgggttcttgccatgctgcccaggctggagagcagtgctgtgatctcagctcactgcaacctccacctcctgggctccagcagtcctcccac-------------gga------------------------------gctgagactacaggcatgagccaccatgcctggctaatttttatatgttttgt---------------------------------------------------------------------agagatggggtttcaccatcttgaccaggctggtcttaaactcctgggctcaagcagtcctcct---tcagcctcccaaagtgttgggattataggtgtgagccgctgcCAGAAAACCTTTTCCTAAGACAAGGCAGGTTTTACATTATATTTAGC------TCTTTTTTTGTGTGTGTTTTGAATGAAGTCTTTTTTCGCAGTGCACAGCT-GAGAAcccctcaccacagaagacaggaaagttgtgctgtgcccacgtgat-gggcactcc i calJac3.chr2 I 360 C 0 e mm10.chr13 46098931 696 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I a score=812754.000000 s hg38.chr3_KI270935v1_alt 59090 290 + 197351 tcagcactaggaaggagtggactgttggcgcacgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat---aa-agcgcatgctgtgtacagagggtgtcgagaatgcctcctacgtgacg------gaaagcagatccgtggttccctgcagact------ggcaggagcagattccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCTGCGCATTATACC--ACAAAAA-AGCTGGGAATAAAAATGCTAACC--AAAAAAAAAGGTGAAAGTa-ga s panTro4.chr3_GL389630_random 23784 289 + 103936 tcagcactaggaaggagtggactgttggcgcacgcagcagcttgaataaatctgaa---------agtcactacgctgcgtaagagaagccaaat---aa-agcgcatgctgtgtacagagggtgtcgagaatgtgtcctacgtgacg------gaaagcagatccgtggttccctgcagact------ggcaggagcagattccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCTGCACATTACACC--ACAGAAA-AGCTGGGAATAAAAATGCTAACC---AAAAAAAAGGTGAAAGTa-ga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199705126 295 + 202140232 tcagcactaggaaggagtggactattggcgcatgtagcagcttgaataaatctgaa---------agtcactacactgcgtaagagaagccaaataaaaa-agttcatgctgtgtacagagggtgttgagaatgcctcctacgtgacg------gaaagcagatccgtggttcccTGCAGACC------GGCAGGAGCAGATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGCGCATTATACC--ACAAAAA-AGCTGGTAATAAAAATGCTAACC-AAAAAAAAAAGGTGAAattagga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120804555 295 + 123690457 tcagcacta-gaaggagtggactattggcacacgcagcagcttgaataaatctgaa-------acagtcaccacgctgcgtaagagaagccaaataaaaa-agcgcatgctgtgtatagagggtgtcgagaatgcctcctgcgtgaca------gaaagcagatCCATGCTTCCTTGCAGACT------GGCAAGAGCAGATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTCCACC--ACAAAAA-AGctggtaattaaaatgctaacc--aaaaaacaaggtgaaaccagga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 24782 294 + 180491593 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaataaaaa-agtgcatgctgtgtacagagggtgtcgagaatgcctcctgtgtgaca------gaaagcagatccgtggttccctgcagact------ggcaggagcagattccaaaggcacaggaagaagctt---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACCAAAAAAAAA-Agctggtaataaaaatgctaacc----aaaaattggtgaaactagga i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180297380 293 - 181584905 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaa---------agtcactatgctgcgtaagagaagccaaataaaaa-agtgcatgctgtgtacagagggtgtcgagaatgcctcctgtgtgaca------gaaagcagatccgtggtt-cctgcagact------ggCAGGAGCAGATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACC--AAAAAAA-AGCTGGtaataaaaatgctaacc--aaaaaaaaaggtgaaactagga i macFas5.chr6 C 0 C 0 s papAnu2.chr6 173181597 291 - 174439528 TCAGCACTAGGAGGGAGTGGACTGTTGGCACATGCAGCAGCTTGAATAAATCTGAA---------AGTCACTATGCTGCATAAGAGAAGCCAAATAAAAA-AGTGCACGCTGTGTACAGAGGGTGTCGAGAGTGCCTCCTGTGTGACG------GAAAGCAGATCCGTGGTC-CCTGCAGACT------GGCAGGAGCAGATTCCAAAGGCACAGGAAGAAGCTT---GCAGGTA--GAATGTGTTCATCACCTTCTGTGCATTACACC--aaaaaaa-aGCTGGTAATAAAAATGCTAACC----AAAAATTGGTGAAACTAGGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 89628735 305 - 91010382 tcagcactaggaaggagtggactgttggcacatgcagcagcttgaataaatctgaaagtcactatagtcactatgctgcgtaagagaagccaaataaaaa-agtgcatgctgtgtacagagggtgtcgagaatgcctcctgtgtgacg------gaaggcagatctgtggttccctgcagact------ggCAGGAGCAGATTCTTAAGGCACAGGAAGAAGCTTGCAGCAGGTA--GAATGTGTTCATTACCTTCTGTGCATTACACC--AAAAAAA-AGCTGGtaataaaaatgctaacc---aaaaaaaaggtgaaactagga i chlSab2.chr4 C 0 C 0 s calJac3.chr2 168340 275 - 204313951 tcagcactgggaaggaatgcactattggcacacacagcagcttggatcaatctgaa---------agtcactacactgagttagagaagccaaataaaaagagtataggctgtg------------------tgactcc-aCGTG-CA------CAGTGTCGA--CACGGTTCCCTGCAGAGT------GGCAGGAGCAGATTCCAAAGGCACAGGAAGAAGCTT---GCGGGTA--GAATGTGTTCAATCCCTTCTGCACATTATACC--ACAAAAAGAGCTGGtaataaaaatgctaacc-aaagaaaaaaggcgaaactagga i calJac3.chr2 C 0 C 0 s mm10.chr13 46099627 294 - 120421639 tcactactagaaaaggacgggct-ttggtatacacagcagcatggatgaatctcaa---------tgctattgacaagggta--agaagtcaag----aa-ggtacacactgattgcacttgaagtctagaa--actgctaactgacatgtaataacagaagatcagTAGCTCTATGCAGATTTGGAAAAGGAGGAAGAGGTCCCTAAGAT-TAGGAGGAAAGCT---TTATGTGATAATTATGTTTGTTATTTTCTGCTAATTATACC--TCAAAAC------TTAAAAAagaaggaagaggaggaagaagaggaggaaagaga- i mm10.chr13 I 696 I 2341 e canFam3.chr34 30188831 1339 - 42124431 I a score=784841.000000 s hg38.chr3_KI270935v1_alt 59380 297 + 197351 taaaatttctcaactgtgtgatgggtaaacgtgcaggtttgctgtcatgctttgtttatgaagctgt-ggggtacaaggactctcatacgtcactgtggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaacgacatggcatttgcccttagactcagcaattcta-gaatctgcctc-aaaaaaaactctggcaaagaaatgaaaggactttatccacagagttcttttcacagcctgaatgtgtttgccacaaagttcttcactgtggcatttgtaaa---------- s panTro4.chr3_GL389630_random 24073 298 + 103936 taaaatttctcaactgtgtgatgggtaaacgtgcaggttggctgtcatgctttggttatgaagctgt-ggggtacaaggactctcatacgtcactgcggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaactacatggcatttgcccttagactcagcaattcta-gaatctgcctcaaaaaaaaactctggcaaagaaatgaaaggactttacccacagagttcttttcacagcctgaatgtgtttgccacaaagttattcactgtggcgtttgtaaa---------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199705421 297 + 202140232 taaaatttctcaactgtgtgatgggtaaacgtgcgggtttgctgtcatgctttgtttgtgaagctgt-gggttacagggactctcatacgtcactgtggaatgcagaacgttgcagcctcatggaggaggatttggcagcgtctaacaaaactacctggcatttgccctttgactcagcaattcta-gaatctgcctc-aaaaaaaactctggcaaagaaatgaaaggagtttacacacagagttcttttcacagcctgaatgtgtttgcaacaaagttcttcactgtggcctttgtaaa---------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120804850 296 + 123690457 taaaatttctcaactgtatgatgggtaaacgtgtaggtttgctgtcatgctttgtttatgaagctgt-gtggtacaaggactctcatacgtcactgtggaatgcagaacgttgcagcctcatggaagaggatttggcagcatctaacaaaactacatggcatttgccctttgactcagcaattcta-gaatcttcctc--aaaaaaactctggcaaagaaatgaaaggactttacgcacagagttcttttcacagcctgaatgtgtttgcaacaaagttcttaactgtggcatttgtaaa---------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 25076 294 + 180491593 tgaaatttcttacctgtgtgattggtaaacgtgcaggtttgccatcatgctttgtttatgaagctgt-ggggtacaaggactctcatacctcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcgtctaacgaaagtatgtagcatttgccctttgactcagcaattctg-gaatctgcatc--aaaaaaa--ctggaaaagaaatgaaaggactttatgcacagagttcttttgacagcctgaatgtgtttgcaaccaagttcttcactgtggcatttgtaaa---------- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 180297673 296 - 181584905 tgaaatttcttacctgtgtgattggtaaacgtgcaggtttgccatcatgctttgtttatgaagctgt-ggggtacaaggactctcatacctcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcatctaacaaaactatgtggcatttgccgtttgactcagcaattcta-gaatctgcctc--aaaaaaactctggcaaagaaatgaaaggactttacgcacagagttcttTTCACAGTCTGAATGTGTTTACAACAAACTTCTTCACTGTGGCGTTTGTAAA---------- i macFas5.chr6 C 0 N 0 s papAnu2.chr6 173181888 295 - 174439528 TGAAATGTCTTACCTGTGTGATTGGTAAACGTGCAGGTTTGACGTCATGCTTTGTTTGTGAAGCTGTGGGGGTACAAGGACTCTCACACCTCACTGTGGAATGCAGAACGTTGCAGCCTCGTGGAAGAGGATTTGGCAGCGTCTAACGAAAGTATGTAGCATTTGCcgtttgactcagcaattctg-gAATCTGCAtc--aaaaaaa--ctggaaaagaaatgaaaggacttTACGCACAGAGTTCTTTTCACAGTCTGAATGTGTTTACAACAAACTTCTTCACTGTGGCATTTGTAAa---------- i papAnu2.chr6 C 0 N 0 s chlSab2.chr4 89629040 296 - 91010382 tgaaatttcttacctgtgtgattggtaaacgtgcaggtttgccatcatgttttgtttatgaagctgt-ggggtacaaggattctcgtacgtcactgtggaatgcagaacgttgcagcctcgtggaagaggatttggcagcgtctaacgaaagtatgtggcatttgccctttgactcagcaattcta-gaatctgcctc--aaaaaaactctggcaaagaaatgaaaggactttacgcacagagttcttttcacagcCTGAATGTGTTTACAACAAAGCTCTTCACTGTGGCATTTGTAAA---------- i chlSab2.chr4 C 0 N 0 s calJac3.chr2 168615 282 - 204313951 taaagtgtctcacccgtgtgactggtaaacaggcaggtttgctgtcaggcttcgtttgtgaagatgt-agggtacaaggactc----acaccggtgtggagtgcagaatgctgcggcctcagggaagaggatttgtcagcatctgac--agctgcatggcatttgctctttgacttaacaattctagggatctgtctc--taagacactctggcggagaaatgaaag-----------------ccttctcacggcctgagtgtgtctg--acaaagttcttcaccgtggcattgaagaaccggaataat i calJac3.chr2 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I a score=669388.000000 s hg38.chr3_KI270935v1_alt 59677 569 + 197351 actggaaacaatcaaaatgtccatcagtaagggattaggaacattaattcgtgcagtggggaactccgtaccagaaggaggaatgaggaaCGCCTATTGATAAGGGGCAGAGTACATATAATATAATGCAAATATATATTTGCTTTTTCTTAAAACAGTACAAAGATAAAAATCTAAAGTGGTTGCTGTGGAGGACaggggtcagtggtggaagtgagaccgaaatagactctgaagtaata-tctggactttgaaattgtaagtgttttacatattaccaaac-taagtttttaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACAAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGTGGGAGGTGAGACAGGAAAGAGGCGGCAGCATGGGGCGTCCGGGAGCCGGGTCTCATGTGGACAGCTGGGCCCGTGTTCACTGTGGGAGCTGGTGCGTTCCTTCACCAGCCCACGCTGCACAGGTTCAGGATGGTCAATTCCGGGCA s panTro4.chr3_GL389630_random 24371 568 + 103936 actggaaacaatcaaaatatccatcagtaggggattaggaacattaattcgtgcagtggggaactccgtaccagaaggaggaatgaggaacgcctattgataaggggcagagtgcatatcatatgatgcaaatatata-ttgctttttcttaaaacagtacaaagataaaaatctaaagtggttgctgtggaggacaggggtcagtggtggaagtgagaccgaaatagactctgaagtaata-tctggactttgaaattgtaagtgttttacatattaccaaac-taagtttttaagatagtccctaaaattgaaagaatggtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGGGAAGTGGGAGGTGAGACAGGAAAGAGGCGGCGGCACGGGGCGTCTGGGAGCCGGGTCCCATGTGGACAGCTGGGCCCGTGCTCACTGTGGGAGCTGGTGTGTTCCTTCACCAGCCCACGCTGCACAGGTTCAGGATGGTCAATTCCGGGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199705718 569 + 202140232 actggaaacaatcaaaatgtccatcagtaggggattaggaacattaattcgtgcagtggggaactcagtaccagaaggaggaatgaggaagGCC-ATTGATAAGGGGCAGAGTACATATCATATAATGCAAATATATATTTGCTTTTTCTTAAAACAGTACAAAGATAAAAATCTAAAGTGGTTGCTGTGGAGGACAGGGGTCAGTGGTGGAAGTGAGACTGAAATGGACTCTGAAGTAATA-TCTGGACTTTGAAATTGTAAGTGTTTTACATATTACCAAACTTAAGTTTTTAAGATAGTCCCTAAAATTGAAAGAATAGTATCTGAAATGAATGAATCTAAATTCCTTGGATTGCATTCTAC-AGGCGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGGA-----GCTGAAGGGAAGTGGGAGGTGAGACAAGAAAGAGGCGGAGGCATGGGGCATCCAGGAGCCAGGTCCCACGTGGGCAGCTGGTCCCATGCTCACTGTGGGAACTGGTGTGTTCCTTCACCAGCCCACGCTGCACAGGTTCAGGATGGTCAATTCCAGGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120805146 567 + 123690457 actggaaacaatcaaaatgtccatcagtaggggattaggaacattaattcgtacagtggagaactcagtaccagaaagaggaatgaggaatgcctattgataa-gggcagagtgcatataatataatgcaaatatatatttgctttttcttaaaacagtacaaagataaaaaactaaagtggttgctgtggaggacaggggtcagtggtggaagtgagaccgaaatagactctgaagtaata-tctggactttgaaattgtaagtgttttacatattaccaaac-taagtttttaagatagtccctaaaattgaaagaatagtatctgaaatgaatgaatctaTATTCCTTGGATTGCATTCTAC-AGGTGCCAACCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCAGGGCTGCTGAAGGGAAGCGGGAGGTGACACAGGAAAGAGGTGGCGGCACGGGGT------GAGCCAGGTCCCATGTGGGCAGCTGGGCCTGTGCTCACTGTGGGAGCTGGTGTGTTCCTTCACCAGCCCACGCTCCACAGGCTCAGGACGGTCAATTCCGGGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 25370 569 + 180491593 accggaaacaatcaaaatgtccatcagtaggggattaggaacattaatttgcacagtggggaactcagtaccagaaagaggaatgaggaaggcctATTGATAAGGAGCAGAGTACatataatataatgcaaatatgtatttgctttttcttaaaacagtacaaagatagaaaactaaagtggttgctgtggaggacaggggtcagtggtggaagtgagactgaaatagactctgaagtaata-cctggaccttgaaattttaaatgttttacatattaccaaac-taagtttttaagatagtccctaaaattgaaagaatagtatctgaaatgaatgaatctaaATTCCTTGGATTGCATTCTAC-AGGCACCAACCCTGAGATCAAAATTTGGAAGGTGGCCCTGAGCACTA-----GCTGAAGGGAAGCAGGAGGTGGGACAGGAAAGAGGTGGTGTCGTGGGGCGTCCAGGAGCCAGGTCCCACAAGGGCAGCTGGGCCCGTGCTCACTGTGGGAGCTGGTGCGTTCCTTCACCAGCCAACGCTCCACAGGTTCAGGACGGTCAATTCCAGGCA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 168897 558 - 204313951 actggaaacaatacaaacgtccgtcagtcggggattaggaacattaactcccacagtgagtaactcagtacaggaagaaggaatgaggaaggcc---tGAGGAGGGGCAGAGTACCTATGATATAATGCAAATATATATTTGCTTTTTCTTAAAACAGCAGAAAGAT-------TAGTGTGGTTGCTGTAGGGGAT-GGGGTCTGTGGT-GAAGAAAAACTGAAATCGATTCTGAAGTAATACTTTGGACTTTGAAATTGTAAATGTTTTACTTACTACCAAAC-TAAGTTTTTAAGGTAGTCTCTAAAATTGAAAAAATGGAATCTGAAATAAATGAATCTAATGGCCTTGCATTGCATTCTACAAGGCATCAGCCCTGAGACCAAAATTTGGAAGGTGGCCCTGAGCAGCA-----GCTGAAGAGAA-TGGGAGGTGAGACAGGAAAGAGGAGGTGGCACAGGGCGTCTGGGAGCCGGGTCCCTCATGGGCAGCTGGGCCCGTGCTCACTGTGGGTGTTGGTGCGTTCTTTCACCAGCCCACGCTCCACAGGTTCAGGAGAGTCAATTCCGGGCA i calJac3.chr2 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30188831 1339 - 42124431 I a score=439719.000000 s hg38.chr3_KI270935v1_alt 60246 372 + 197351 CCCCTGGC-CTGCTCCAGGACATGCTGCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGGTGGTGTCAGAATCGAGTTTGAGTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACGGGGTTCTGCagcccaactgcacatcaggctggtgacagtcac----gcagcctattacttcatgtgtcatcagaggatcgctagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctc--cgttactcgtcttataggtattaatcctttgaaattatgtggggtgggagttaaagcaaataactaattat s panTro4.chr3_GL389630_random 24939 372 + 103936 CCCCTGGC-CTGCTCCAGGACGTGCTTCTGCCACCAGGGAAAGCCCCTAGGCAGCGTCCCGGGTGCTGATGGTGTCAGAATCGAGTTTGAGTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCACAGGGTTCTGCagcccaactgcacatcaggctggtgacagtcac----gcagcctattacttcatgtgtcgtcagagcatcgctagaacacagcacttc-aagtgtgcagatttagtgagtcatagtctaaagacaaatagagccactg---aatcctaaatttcaatcaatcatctc--ccttactcgtcttattggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199706287 370 + 202140232 CCCCTGGC-CTGCTCCAGGATGTGCTCCTGCCACCGGAG-AAGCCCCTAGGCAGTGTCCCAGGTGCTGGTGGTGTCAGAATCGAGTTTGAGTCTGAGGAGTGACATGGGGCTGGCTGGGCTAGGCAGCATCACGGGTTTCTGCAGCCCAACTGCACATCAGCCTGGTGACAGTCAG----GCAGCCTATTATTTCATGTGTTGTCAGAGCATTGCTACAACACAGCACTTC-AAGTGTGCAGATTTAGTGAGCCATAGTCTAAAGACAAATAGAGCCACTA---AATCCTAAATTTCAATCAGTCATCT---TGTTACTTGTCTTATTGGTATTAATCCTTTGAAATTATGTGGGGTGGGAGTTAAAGCTAATAACTAATTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120805713 370 + 123690457 CCCCCGGC-CTGCTCCAGGACGTGCTCCTGCCACCAGAGAAAGCCCCTAGGCAGCGTCCTGGGTGCTGGTGGTGTCAGGATCGAGTTTGAGTCTGAGGAGTGACCTGGGGCTGGCTGGGCTAGGCAGCATCATGGGGTTCTGCAGCCCAGCTGCACATCAGGCTGGTGACAGTCAC----GCCACCTA----TTCATGTGTCATCAGAGCATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccacta---aatcctaaatttcaatcaatcatctccttgttacttgtcttattggaattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 25939 363 + 180491593 CCCCCAGC-CTACTCCAGGATGTACTCCTGCCACCAGAGAAAGCTCCTAGGCAGCGTCCCGGGTGCTTGTGGTGTCAGAATCCAGTTGGAATCTGATGAGTGACCGGGGGCTGGCTGGGCTAGGCAGCATCATGGGTTTCCGCAGCCCAAGTGCACATCAGGCTGGTGACAGTCAC----ACAGCCTA----TTCGTGTGTCGTCAGAACATCGCtagaacacagcacttc-aagtgtgcagatttagtgagccatagtctaaagacaaatagagccactg--aaatcctaaatttcaatcaat--------cattacttgtcttattggtattaatcctttgaaattatgtggggtgggagttaaagctaataactaattat i rheMac3.chr6 C 0 C 0 s calJac3.chr2 169455 313 - 204313951 C----------------------ACTCCTGCCAGCAGAGAAAGC-CCTAGGTAGCATCCCGGGTGCT-GTGGCGTCAGAATCCAGTTTGAGTCTGAGGAGTGCCCTGGCACTGGCTGGGCCGGGCAGCACCACGGGTTTCTGCAGCCCAGCTGCACAGGAGGCTGCTGACAGTCAC----GCAGCCTGTGATTTCATCT----------------CAGGACACAGCACTTC-AAGTGTGCAAATTCAGT-----------------------GAGCCACTG--AAATCCTAAATTTGAATCCATCATCTCACTGTTACTTGTCTTATTGGTATTAACCCTTTGAACTTACGTGTGGTGGGAGTTGACGCTAATAACTAATTAT i calJac3.chr2 C 0 C 0 s canFam3.chr34 30190170 347 - 42124431 CTCCTGGCTCTACTC-------TACCACTACCACCAGAGAGAGACCCTGAGCAGAATCACAGGTGCT--TGGGGCAAGAA---GGTACAGGTCTGGTGAGTG-CTGGGGGAGTTCCAGACCATGCAGCATC--GAGTGTCTGCaacccagctgcagatcaaa-tggtgactgtcacaagaggagagtgtcatttcaagtggcat-----------tagaacatagaacttctgagtttacagtttcagtaaac-----tttaaggataaatgaaaccactaagaaagcctatgtttc-atcagcagtcttactgttactagggatattggtgttcatactttgaaattgtgt--agtgtaagttaaagctagtaa-taagtat i canFam3.chr34 I 1339 I 59 e mm10.chr13 46099921 2341 - 120421639 I a score=34062.000000 s hg38.chr3_KI270935v1_alt 60618 29 + 197351 gttaatgctaaaactaagatttttctggc s panTro4.chr3_GL389630_random 25311 29 + 103936 gttaatgctaaaatgaagatatttctggc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199706657 29 + 202140232 GTTAATGCTAAAACTAAGATTTTTCTggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806083 29 + 123690457 gttaatgctaaaactaagatttttctggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 26302 27 + 180491593 gttaatgCTAAAAC--AGATTTTTCTggc i rheMac3.chr6 C 0 I 2536 s calJac3.chr2 169768 29 - 204313951 GTTAATGCTAAAAGTAAGATTTTTCTggc i calJac3.chr2 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190517 59 - 42124431 I a score=4331.000000 s hg38.chr3_KI270935v1_alt 60647 10 + 197351 aagggaaaat s panTro4.chr3_GL389630_random 25340 10 + 103936 caggtatggt i panTro4.chr3_GL389630_random C 0 I 13 s ponAbe2.chr3 199706686 10 + 202140232 caggtatggt i ponAbe2.chr3 C 0 I 8 s nomLeu3.chr11 120806112 10 + 123690457 caggtgcggt i nomLeu3.chr11 C 0 I 1 s calJac3.chr2 169797 10 - 204313951 caggagtggt i calJac3.chr2 C 0 I 8 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190517 59 - 42124431 I a score=-1191.000000 s hg38.chr3_KI270935v1_alt 60657 7 + 197351 cctccca s ponAbe2.chr3 199706704 5 + 202140232 cctgc-- i ponAbe2.chr3 I 8 C 0 s nomLeu3.chr11 120806123 7 + 123690457 gctcaca i nomLeu3.chr11 I 1 I 5 s calJac3.chr2 169815 5 - 204313951 cctgt-- i calJac3.chr2 I 8 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190517 59 - 42124431 I e panTro4.chr3_GL389630_random 25350 13 + 103936 I a score=73182.000000 s hg38.chr3_KI270935v1_alt 60664 92 + 197351 agtcccagcac-tttgggaggccgaggtgggcagatgacctgaggtcaggagtttgagaccagcctggccaacatggtgaaacgcc-atctcta s panTro4.chr3_GL389630_random 25363 92 + 103936 aatcccagcac-tttgggaggccgaggcgggcagatgacctgacgtcaggagtttgagaccagcctggccaacatggtgaaacccc-atctcta i panTro4.chr3_GL389630_random I 13 C 0 s ponAbe2.chr3 199706709 92 + 202140232 aatcccagcac-tttgggaggccgaggcaggcagatcacctgaggccaggagtttgagaccagcctggccaacatggtgaaacccc-atctcta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806135 92 + 123690457 aatcccagcac-tttgggaggccgaggtgggcagatcacctgaggccaggagttcgagaccagcctggccagcatggtgaaaccct-atctcta i nomLeu3.chr11 I 5 C 0 s calJac3.chr2 169820 94 - 204313951 aatcccagcacttttgggaggctgaggcgggcaggtcacctgaggtcagcagtttgagaccgccgtggccaacatggtgaaacccctgtctcta i calJac3.chr2 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190517 59 - 42124431 I a score=101484.000000 s hg38.chr3_KI270935v1_alt 60756 180 + 197351 ct-aaaattgaaaaatta-gctgggcatggtggcaggtgcctgtaatcccagctattggggaggctgaagcaggagaatcgcttga-aacaggaggcagagattgcagtgagccgagattgtgccactgcactccagcctgggcaacaggaacaaaactctatctcaaaaaataaaacaagat s panTro4.chr3_GL389630_random 25455 180 + 103936 ct-aaaattgaaaaatta-gctgggcatggtggcaggtgcctgtaatcccagctgttggggaggctgaagcaggagaatcgcttta-accaggaggcagagattgcagtgagccgagattgtgccactgcactccagcctgggcaacaggaacaaaactctatctcaaaaaataaaacaagat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199706801 180 + 202140232 ct-aaaattcaaaaatta-gctgggcatggtggcaggtgcctgtaatcccagctattcaggaggctgaagcaggagaatcacttga-aacaggaggtggagattgcagtgagctgagattgtgccatggcactccagcctgggcaacaagaacaaaactctatctcaaagaataaaacaaGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806227 180 + 123690457 ct-aaaattccaaaatta-gctgggcatggtggtaggtgcctgtaatcccagctgtttgggaggctgaggcaggagaatcgcttga-accaggaggcagagattgcagtgagccgagactgtgccacggcactccagcctgggcaacaggaacaaaactctacctcaaaaaataaaaaaagat i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 169914 150 - 204313951 ctaaaaatacaaaaattaggccaggcgcagtggctcacacctgtaatcccagcacattgggaagccaaagcagtag-atcacctgaggtcaggagttcaaga-------------------------------ccagcctgagcaatatgga-gaaactctgtctctactaaaaatacaaaat i calJac3.chr2 C 0 C 0 s canFam3.chr34 30190576 123 - 42124431 tt-gagattgagaaatca------------------------------ctag---ttggaggggcagagggagagg--------ga------gaagcagactctccaccaagcagggaacccaacgcagggctcaatcccggg------------acccctatatcatgacctgagccaaggc i canFam3.chr34 I 59 I 73 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I a score=910.000000 s hg38.chr3_KI270935v1_alt 60936 1 + 197351 t s panTro4.chr3_GL389630_random 25635 1 + 103936 t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199706981 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806407 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 170064 1 - 204313951 t i calJac3.chr2 C 0 I 588 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190699 73 - 42124431 I a score=40022.000000 s hg38.chr3_KI270935v1_alt 60937 79 + 197351 tttctgagaaaaaggtgtaaaaccgtatactaaatttgaaatagaaatataagcgtgaactcatttgttgttcttttac s panTro4.chr3_GL389630_random 25636 79 + 103936 tttctttgaaaaaggtgtaaaaccatatactaaatttgaaatacaaatataagcgtgaactcatttgttgttcttttac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199706982 79 + 202140232 TTTCTGAGAAAAAGGTGTAAAACCATATACTAAATTTGAAATAGAAATATAAGCATGAACTCATTTGTTGTTCTTTTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806408 79 + 123690457 tttctgagaaaaaggtgtaaaaccatatactaaatttgaaatagaaatataagcgtgaactcatttgttgttcttttca i nomLeu3.chr11 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30190699 73 - 42124431 I e calJac3.chr2 170065 588 - 204313951 I a score=168014.000000 s hg38.chr3_KI270935v1_alt 61016 255 + 197351 cgtagacacattttctacctctgccccagtagcagtagacacatcaagcacctagaaagtgg-------------------tctct-------------------aatacatgaaaaccatga--------attcatagtggtggtttcaaagccaa----a-accaaacaaacacatgtaattggtcactcttggaggtacctagggcactaactcctaacactgggaatggacacttgaaggaagat----cagtaattatcctgtcttttctctacaaattgcaattcagggaaaccttgttgatta s panTro4.chr3_GL389630_random 25715 259 + 103936 cgtatacacattttctacctctgcccCAGTAGCAGTAGACACATCAAGCACCTAGAAAGTGG-------------------TCTGT-------------------AATACATGAAAACCGTGA--------ATTGATAGTGATGGTTCCAAAGCCGAAACCA-ACCAACCAAACACATGTAattggtcactcttggaggtacacagggcactaactcctaacactgggaatggacacttgaaggaagat----cagcaattatcctgtcttttctctacaaactgcaattcagggaaaccttgttgatta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199707061 259 + 202140232 CGTATACACATTTTCTGCCTCTGCCCCAGTAGCAGTAGACACATCAAGCACCTAGAAAGTGG-------------------TCTCT-------------------AATACATGAAAACCATGA--------ATTCATAGTGATGGTTTCAAAGCCCAAACCA-ACCAaacaaacacatgtaattggtcactcttggaggtacccagggcactaactcctaacactgggaatggacacttgaaggaagat----cagcgattatcctgccttgtttctacaaattgcgattcagggaaaccttgttgatta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806487 259 + 123690457 cgtagacacatttcctagctctgccccagtagcagtagacacatcaagcacctagaaagtgg-------------------tctct-------------------aaTATATGAAAACCATGA--------ATTCATAGTGATGGTTTCAAAGCCAAAACCA-GCCAAACAAACACATGTAattggtcactcttggaggtacctagggcactaactcctaacactgggaatggatacttgaaggaagat----cagtgattatcctgccttttctctacaaattgcaattcagggaaaccttgttgatTA i nomLeu3.chr11 C 0 I 10 s canFam3.chr34 30190772 298 - 42124431 cacacacacacTGCCCCTCTCTGCCCCAGTAGCAGTGGGCTC--TAAGCACCCTGATTGTGGGGTCTGCTTACCACTGCCCTCTCTCCCCCATAGCCACAGATTGACTATattaaaaacattagtatgttcatttataatgatagtttaaaaactcagccaacactgagcaaaca----------atcacttttggaagtaactagggcactaactactaatactgaaaatggacaattagaggaaaatagtgaaatggttatcctgcctttaatccacaaattgccattcaggataacctagttgatta i canFam3.chr34 I 73 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e calJac3.chr2 170065 588 - 204313951 I a score=18834.000000 s hg38.chr3_KI270935v1_alt 61271 53 + 197351 gggaaagttctttacata----agaattcctgcaagtaagtgagtaaagaatgacag s panTro4.chr3_GL389630_random 25974 53 + 103936 gggaaagttctttacata----agaattcctgcaaataagtgagtaaagaatgacag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199707320 53 + 202140232 gggaaagttctttataga----agaattcctgcaaataagtgagtaaagaatgacag i ponAbe2.chr3 C 0 C 0 s canFam3.chr34 30191070 51 - 42124431 ggaaaagtattttatggataataaaat------agataaaggagtaaggaatgatag i canFam3.chr34 C 0 I 90 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e calJac3.chr2 170065 588 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=46193.000000 s hg38.chr3_KI270935v1_alt 61324 170 + 197351 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattagccaggcatgatgatgggtgcctgtaatcccagctactcaggaggctgaggcaggagagttgcttgaacctgggagacggaggttgcagtgagccgagagtgcgcca s panTro4.chr3_GL389630_random 26027 170 + 103936 TTTAAGAATTGTCccagcctggccaacatagtgaaaccccatctctaaaaatacaaaaaattagccaggcatgatggtgggtgcctgtaatcccagctactcaggaggctgaagcaggagagttgtttgaacctgggagacggaggttgcagtgagccaagagtgcgcca i panTro4.chr3_GL389630_random C 0 I 12 s ponAbe2.chr3 199707373 170 + 202140232 tttaagaattgtcccagcctggccaacatagtgaaaccccgtctctaaaaatacagaaaattagccaggcatgatggtgggtgcctgtaatcccagttacttgggaggctgaggcaggagagttgcttgaacctgggagacggaagttgcagtgagccgagagtgcgcca i ponAbe2.chr3 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30191121 90 - 42124431 I e calJac3.chr2 170065 588 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=9424.000000 s hg38.chr3_KI270935v1_alt 61494 112 + 197351 ctgcactccagcctgggcaacaagagtgagactctgtctc--aaaaaaaaaaaaaaagaaTTGTCAAATTGCTACCCCTAATGCCATGGTTCTCTAACCTGTGTAACAGGATCA s ponAbe2.chr3 199707543 114 + 202140232 ctgcactccagcctgggcaacaagagtgaaactctgtctccgaaaaaaaaaaaaaaaaaattgtcaaattgccacccctaatgCCgtggttctctaagctgtgtaacaggatca i ponAbe2.chr3 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30191121 90 - 42124431 I e calJac3.chr2 170065 588 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=0.000000 s hg38.chr3_KI270935v1_alt 61606 108 + 197351 GCTGGAGGGACGCTACCCCAGACCTTCCAATTCAGTCCTGGGGGGACCCTAGTCCAGACCTTCCGATTCGGTCCTGGGGGGGCCCTAGTCCAGACCTTCCAATTCAGT e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30191121 90 - 42124431 I e calJac3.chr2 170065 588 - 204313951 I e ponAbe2.chr3 199707657 0 + 202140232 C e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=13642.000000 s hg38.chr3_KI270935v1_alt 61714 182 + 197351 CCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGAGACCCTACCCCAGATCTTCTGATTCAGTCCTGGGGGGACCCTCGTCCAGACCTTCCGATTCAGTCCTGGGGGGACCCCACCCCAGACCTTCCGATTCAGTCCTGGGGTACCCCACCCCAGACCTTCCGTTTTCAGTCC s ponAbe2.chr3 199707657 179 + 202140232 cctggagggaccctaccccagatcttccgatccagtcctgggga-accccgccctagatcttccaattcagtcctggggggacccTATCCCAGACCTTCCGATTCAGTCCTGGGGG-ACCCCACCCCAGATCTTCCGATTCAGTCCTGGGGGACCCCACCCCAGATCTTCCGATT-CAGTCC i ponAbe2.chr3 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30191121 90 - 42124431 I e calJac3.chr2 170065 588 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=1502.000000 s hg38.chr3_KI270935v1_alt 61896 6 + 197351 TGGAGg s ponAbe2.chr3 199707836 6 + 202140232 TGGGGg i ponAbe2.chr3 C 0 C 0 s calJac3.chr2 170653 6 - 204313951 TGGAGg i calJac3.chr2 I 588 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e canFam3.chr34 30191121 90 - 42124431 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=81090.000000 s hg38.chr3_KI270935v1_alt 61902 266 + 197351 gaccctaccccagatcttccgattca----gtcct--ggttcggtctgagaatttgcatttctaacatgtccaggGAACACAGTTTGAAAACCTCCACGGCTAACATGTAATGGGATGACATGGTCCAATAAATGAAG-----------GAAAAATAACAGG------------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAA--GAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC s ponAbe2.chr3 199707842 266 + 202140232 gaccctacctcagatcttccaatgca----gtcct--ggttcggtctgagaatttgcatttctaacatgtccaggGACCACAGTTTGAAAACCTCCATGGCAGACATATAATGGGATGATATGGTCCAATAAATGAAG-----------GAAAAATAACAGG------------TGGCAACCTCAGGCAGCTTCATCCCAACCAGTAA--GAAAGTAAAT-------CCTTTTGTAAACTAAGAGGAAGTATTAATATGGGCGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAAC i ponAbe2.chr3 C 0 C 0 s calJac3.chr2 170659 281 - 204313951 gaccctaccccagaacttcca--tca----gtcct--ggttaggcctgagaattggcatttctaacatgcccaggGACCACAGTTTGGAAACCTCTGTGGCAGACATGTAATGGGATGACACGGTCCGATAAACGGGG-----------GAACAACAACAGGTGGAGA-CCCCCTGGCAACCTCAGGAAGCTTCATCCCAGCCAGTAA--GAAAGTAAATCCCCAAGCCTTCTGAAAACTAAGAGT-AGTATTAACACGGGTGTTTGAGCAAACATTTAAGTGTTAGGACAAAGAATTAAAAGC i calJac3.chr2 C 0 I 294 s canFam3.chr34 30191211 286 - 42124431 gaccccatcccaggacttctggttcagcaggtcctggggttggtcctgagaatctgcatgtgtagtatgttcAGGGCCCACCCTTTGAAAACC----------ACCTGT-TTGGGGTGATGTGGT-CAACAAACATGGAGATGATTTTCAGAAGATAACAGGTGGAGAGATGACTGACAACTTCAGAC--CTCCATGCTAACCAGTAGATGAAACAGCGTGCCAAAGAATATTGCAG---AAGTGGAAGTATAAATATGGGCATCTAAAC-ATCATTTAAGTGTTAGGACAATGAATGAAAAGC i canFam3.chr34 I 90 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=99364.000000 s hg38.chr3_KI270935v1_alt 62168 412 + 197351 TAGCACAGGCA--CCCCTGAAGCATGATAGGATGGCAACAGAAGGGCTGATTTAGTTTCCAAGAAATAACTGACAGGCAGTGT---TGTGCGTGTGTCTACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGGTCTGGAAATGTAAATGTTGATGG---------------------------------------------TACTCCAGTAA----TGAG-------------------------------------------------------------------TCATGGAACAATGTTTCA----------------------------------------------------TATTGAAAATGTTTTTGTA-AATGTGGGTTTCAGGGTTTCAAAGTGAACCCATATGTGTTAGGAGAAAGGACACACCAAAGAAG------TAAAATAATTGGGTCAATATAAAAAG----TAGAATATTGCCCAGAGAGAAGATGTGGATAATTCCTAATACGGATCAAAGGCACCAAA--AAGGTG----------------AGCTGTGAG s ponAbe2.chr3 199708108 418 + 202140232 TAGCACAGGCA--CCCCTGAAGCATGATAGGATGGCAACAGAAGGGCTGATTTAGTTTCCGAGAAATAACTGACAGGCAGTGT-TGTGTGTGTGTGTCTACTACTTAGGAACCCAAAACAAACCTTCAGACCGTTTTCATGAGTA--CTGAGACCAAGAAAACCACTGGGCAGTGGGTGTTCTCGAAATGTAAATGTTGATGG---------------------------------------------TACTCCACTAA----TGAG-------------------------------------------------------------------TCATGGAATGGTGTTTCA----------------------------------------------------TATTGAAAATGTTTTTGTA-AATGTGGGTTTCAAGGTTTCAAAGTGAACCCGTATGTGTTAGGAGAAAGGACACACCGAAGAAG------TAAAATAATTGGGTCAATATAAAAAGAAAATAGAATGTTGCCCAGAGAGAAGATTTGGATAATTCCTAACATGGATCAAAGACACCAAA--AAGGTG----------------AGCTGTGAG i ponAbe2.chr3 C 0 I 108 s calJac3.chr2 171234 407 - 204313951 TAGCACAGGCA--CCCCTGAAGTATGATAGGGTGGCAACGGAAGGGCCAATC-----------GAATAACTGCTGGGCAGCTTCCTTGTGTGTATGTCTACTA---AGGAATCAGAAACAAACCCTCAGACAGTTCTCATGAGTA--CTGAGACCAAGGAAGCCACTGGGCAGTGGGTGGTCT-GAAAAGTAAATTTTTATAG---------------------------------------------TGCTCCACTAATTACTGAG-------------------------------------------------------------------TCATAGAACGATGTTTCA----------------------------------------------------TATTGAAAATG-TTTTGTA-AATGTGGGTTTCAAGGTTTCAAAATGAACCCATGCTTGTTCAGAGAAAGGACAAACCAAAGAAG------TAAAATCATTGGGTCAATATAAAAAGAACGTAGAATGTTGCCCGGAGAGAAGGCGTGGATAATTCCTAACACGGATCAAAGGCAGGAAA--AAGGTG----------------AGCTGTGTC i calJac3.chr2 I 294 C 0 s canFam3.chr34 30191497 585 - 42124431 TGGCAAAGGCAGGTACCTGAAGCATAATTAGATG---ACAGAAGGGCTGATT-GGTTTCAAAGAAGTAACTG--AGGCCCTGG---CTTCCTTATATCTGCTACTTTTCAACCAAAAGTCAACCTGTGGACCATTTTTATGAACATTCTGAAACCAAGAAAATCACGGG--AGTAGG---TCTGGAAATACAAGTTCCTATGGGACAGAATATTTCATACTGGTAATATGGGTttttttttgtttgtttgttttattca----tgagagacaggcagagatgtaggcagagtgagaagcaggctccatgcagagaccccaatgtgggactctattccgggattgctggatcatgccctgagctgaaggcagaagctcaactgctgagccacccaggcatctcTGTACTGGAAATA-TTTTGTACAATGTATATTCAAGG--TTCTAAGAGAACCCACA--TGTTAGGGGAATTTACAGAGCAGAGAAATTTTTTTTAAATG--TGCATCAAGGTAAAAAAC---TAGAATACTATCCAGAGAGA---TGTGGTTAATTTCTAATATGGATCAAAAGCAAAAAATTAAGATACAGTACAGTACTCTTCAActgtcca i canFam3.chr34 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=-750.000000 s hg38.chr3_KI270935v1_alt 62580 27 + 197351 ----------------------------TAAGATATTCAGACCTGCAC-----------------------------------catccca s ponAbe2.chr3 199708634 27 + 202140232 ----------------------------TAAGATATTCAGACCTGCAC-----------------------------------CATCCCG i ponAbe2.chr3 I 108 C 0 s calJac3.chr2 171641 20 - 204313951 ----------------------------TGAGATACTCAGACCTGCAC------------------------------------------ i calJac3.chr2 C 0 C 0 s canFam3.chr34 30192082 90 - 42124431 tagcattagccatagccacatagctatttaagctcaccaaaattacataaaacttaaaattacattccctagtccccttgatccatttca i canFam3.chr34 C 0 C 0 e rheMac3.chr6 26329 2536 + 180491593 I e mm10.chr13 46099921 2341 - 120421639 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=37716.000000 s hg38.chr3_KI270935v1_alt 62607 91 + 197351 ----agcagtagccaca-gtggcaagtagcctcctcactggacagtgcagctacggaatgatgccatcaccggaaagttccatcagccagcaccgA s ponAbe2.chr3 199708661 91 + 202140232 ----AGcagtagccaca-gtggcaagtagcctcctcactggacagtgcagctacggaatgatgccatcaccggaaagttccatcagccagcactgA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 28865 91 + 180491593 ----AGcagtagacaca-gtggcaagtagcctccgcactggacagtgcagctatggaacgatgctatcactggaaagttccatcagccagcactgA i rheMac3.chr6 I 2536 C 0 s calJac3.chr2 171661 58 - 204313951 --------------------------------------TGGGCTGTGCAGCTGCGGAACGGTGGCATCGCCGGGAAGTTCCATCGGCCAGCACTGA i calJac3.chr2 C 0 C 0 s canFam3.chr34 30192172 90 - 42124431 agtggtcagtagctacatgtggcaagtggctgccacactggacagcagagcagtcggattgttgca------gaaagttctgttCACCAACAGCAG i canFam3.chr34 C 0 C 0 e mm10.chr13 46099921 2341 - 120421639 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=221195.000000 s hg38.chr3_KI270935v1_alt 62698 513 + 197351 TGCAGACCTTTGC-AACTGCCCCTCAC------GCTGGACAGCACCTGTTTGATAGATTGTCCACTACGCAGTGAAAAGCCTGGGTGAAAAGCGGTATTTGGTAGAAGAGCAAAAAGGGGAAAAAAATTAAAAGTAGTAGGTCATTGTCCGCCAAACTGAATTCTGGCAGAAGAATGTTGGAAGCAAGATGGGAGCCACAGGAGAAAGTATCCTTGTCCCAAGACAGGAGGGGGTG--CCAGGCATGGTTGGCTCTGT-GCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGAAAGATTCTGTGTGCTTATG-TCAAGATGCA-GCCGTCCGTGATCC---TGAGAAAATAAGTGAA-----------CAAAGTGGCTTTGGAGGGA-CGCT---GT-----TGGATACACAAACAGATACA---ATGTGCACTTGC-----TATGCTTGTTCACACAAAGGACAGGATGGTCat------------------ctgttcattgaacaactacctgtcgagggcctatat-gtgccaaagacatcagatg--aacaaga s ponAbe2.chr3 199708752 513 + 202140232 TGCAGACCTTTCA-AATGCCCCCTCAC------ACTGAACAGCACCTATTTGATAAATTGTCCACTACTCAGTGAAAAACCTGTGTTAAAAGCGGTATTTGGTAGAAGAGCAAAAAGGGGAAAAAAATTAAAAGTAGTAGGTCATTGTCCTCCAAACTGAATTCTGGCAGAAGAATGTTGGAAGGAAGATGGGAGCCACTGGAGAAAGTATCCTTGTCCCAAGACAGGAGGGGGTG--CCAGGCGTGGTTGGCTCTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGAAAGATTCTGTGTGCAAATG-TCACGATGCA-GCCATCAGTGATGC---TGAGAAAATAAGTGAA-----------CAAAGTGGCTTGGGAGGGA-TGCT---GT-----TGGATACATGTGCAGATACA---ATGTGCACTTGC-----TATGCTTGTTCACACAAAGGACAGGATGGTCat------------------ctgttcattgaacaactacttgtcgagggcctgtat-gtgccaaagacATCAGATG--CACAAGA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 28956 514 + 180491593 CGCAGACCTTTGCAAATGCCCCCTCAC------ACCGAACAGCACCTATCTGATAGATTGTCCACTACTCAGTGAAAAGCCTGTGTTAAAAGCGGTATTTGGTAGAAGAGCAAAACGGG--AAAAAATTAAAAGTGGCAGGTCATTGTCTTCCATACTGAATTCTGGCAGAAGAATGTTGCAAGGAAGACGGGAGCCACAGGAGAAAGTATCCTTGTCCCAAGACAGGAGGGGGTG--CCAGGCACGGTTGGCTCTGT-CCCTGGAATTCTATGGCCGGAATCTGGAAAAAGGAAAAGTGACTGGAAAAGGAAAGATTCTGTGTGCAAATG-TCATGATGCA-GCCGTCAGTAATCC---TGAGAAAATAAGTGAA----------CCAAAGTGGCTTTGGAGAGA-TGCT---GC-----TGGATACATGTACAGACACA---ATGTACACTTGCA----TATGCTTGTTCACATGAAGGACAGGATGGTCat------------------ccgctcattcaacaaatacttgtcgagggcctatat-gtgccaaagacATCAGATG--CACAAGA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 171719 500 - 204313951 TGTGGCCTTTGCC-CACGCTCTCTCAC------ACTGAACAGCACCTATC----AGAGTGTCCACTACTCAGTGAAACGCCTGTGTGAAAAGCGGTATTTGGTAGAAGAGTAAAAAAGAGGGGGAG---AAAAAGGGTAGGTCATTCTCTTCCATATTGAATTCTGGCAGAACAATGTTGGAAGGAACACGGGAGCCACAGGAGAAAGTA-----GTCCCAGGACAGAAGGGGGTG--CCAGGCACGGTTGGCTCTGT-CCCTGGAATTCCATGGCTGGAATCTGGAAAAAGGGAAAGTGACTGAAAAAGGAAAGATTCTGTGTGCAAATG-TCACGATGCA-CCGGTCAGTGATCC---TGAAAAAATAACTGAA----------CCCAGGTGGCTTCGGAGGGG--GCT---GT-----TGGATGCATGTGC-----CATGTATGTGGACTTGTG----TATGCTCGTTTACACAAAGGACA-GATGGTCAT------------------CTGTTCATC--ACAACACTTTGTCGGAGGCTCTTATGGTGCTAAAGACTTCAGATTGCAACAAGA i calJac3.chr2 C 0 I 918 s mm10.chr13 46102262 363 - 120421639 TGTGGACGTTTGC---TGCTCCCTCAC------ACCATCTAGCGCACATTTGACACACTCATCAATACTCACTAAGAAGCTTGAGTTACA-------------------------------------TAAAGAGTGATAGG---TTCTCTTTAGTATTAAATTCAAAC--CAGAATTTT---------ATTGGAGCCA--AGTGACAGTTTTAACA-CTAGAGAAAGAAGGGTGTG--CTGAGCATATTTGGCT--------------------------ATCAGGAA------AAGTTAACTGAAAATTT--GTCTTCCATGTGCAAATGTTCAGGGTGCATTCCACCAGT-------------AAGCAAAGGAA----------CCAATGTGGCTT-AGAGGTA-CACTTAAAT-----TAGATATGTATAAGAACACG--------------------CATGCGTCTGTACACATACAAAAAGAT------------------------------------------------------CTTTAT---GCAAAAGATAT--------GACAATG i mm10.chr13 I 2341 C 0 s canFam3.chr34 30192262 458 - 42124431 --------------TATACACAGTCACTAGTGTATTAAACAGCACCTAT--GATAAATTGGCCACTACCTAATATAAAACCTGAGTTAAA-------------------------------------TAAAAAGTGGTCAGTCATTCTCTTTCATACTGAATTCTGAC-----AATATTGGTTGGAA--------------------------------------AGGAGGCGGAGGCCTGGGCACAGCTGGCTCCATCCCCTAGAATTCTGC-ACCAGAGTCTGTAAAAGGG--AAGTGACAGAGAAGGT----CTCTAGCGTGTAAATG-TCACAGTACAAGTCATTGGTGGTCTTGATGAGAAAATAAGGCACAAATGACAACTCAATGTGCCTTCAGAGGGAAAGCT---GTTAGGGTGGATACATACAAAGTGTGT---GTGTGTGCGTGCGCCCATGCACACATTCACACACACAAAAGAATGGACATATAACTTACTTGGTCATCCCATTTGTTTAACA------TTTGAGAGTTCACTAT-ATGCCAaagacatacgatg--aacaaga i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=9311.000000 s hg38.chr3_KI270935v1_alt 63211 46 + 197351 GGGTGCACTGTGGAAAGCCTCAGGAACACAAGCGCCCAGAAACATT------ s ponAbe2.chr3 199709265 46 + 202140232 GGGTGCACTGTGGAAAGCCTCAGGAACACAAGTGCCCAGAAACATT------ i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29470 35 + 180491593 GGGTGCACTGT-----------GGAACACACGCGCCCAGAAACGCT------ i rheMac3.chr6 C 0 C 0 s mm10.chr13 46102625 38 - 120421639 ACTTACCCATT--------TCATGCACCTCAGCTCCCAGAAAGAGC------ i mm10.chr13 C 0 I 7 s canFam3.chr34 30192720 50 - 42124431 gggtagactat--gaagtgttaggaatgctagcacccagaaatagccaatgt i canFam3.chr34 C 0 C 0 e calJac3.chr2 172219 918 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=152890.000000 s hg38.chr3_KI270935v1_alt 63257 224 + 197351 Tagaaaaattct-aaggaaaacagaaaaggcatttt-----cagattagctcataga------------aatgagaccaaaggaaagactggcccagtatttggatacattatgtgataaaccttaacacagggaggaa---agtgttatctttcaattaatttctcaact-----------------------tctggagaccttagaacagacctggctaggaggaaattgaat-ccgaggcaggtgagg-----acatagtg----gtgcctcga s ponAbe2.chr3 199709311 224 + 202140232 Tagaaaaattct-aaggaaaacagaaaaggcatttt-----cagattagctcagaga------------aatgagaccgaaggaaagactgacccagtatttggatacattatgtgattaaccgtaacacagggaggaa---agtgttatctttcaattaatttctcaact-----------------------tctggaaagcttagaacagacctgactaggaggaaattgaat-ctgaggcaggtgagg-----agaTAGTG----GTGCCTCAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29505 216 + 180491593 Tagaaaaattct-aaggaaaacagaaaaggcatttt-----caaattag-----aga------------aatgagaccacagtaaagactgacccagtatttggatccattatgtgattaaccttaacacagggaggaa---agtgttctctttcagttaatttctccact-----------------------tctggaaagcttagaacagacctggctaggaggaaacggaat-cggaggcaggtgag--------ATCGCG----GTGCCTGGA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 173137 223 - 204313951 Taaaaaaattct-aagggaaacagaaaaggcatttt-----caaattagctcagaga------------aattagacca-aggaaagactcacccagtatttggatacattatgtgattaacgttaacacagggaggaa---agtgatatctttcagttaatttctcaact-----------------------cctggaaagcttagaacagacctggttaggaggaaattgaat-ccggggcaggtgagg-----agaTAGTG----GTACCTCAG i calJac3.chr2 I 918 C 0 s mm10.chr13 46102670 229 - 120421639 TAGAAAAGTTCTAAAGGAAAACA--------ATTTTGTGTATATAGTAGCTCAAAGAAGTAGCTCAGAGAATTAGGTTAAAGGAAAGAGTGGCCCAATATGCAGACACATGATATGATTAACATCA----TAGGAGGAC---AGGGTTATCTC---ATTTATTTCTCTa--------------------------ctggaaagcttagaacagacctggttaagaggaaactaaac-ctgagatagggcaaggagatagatggtg----gcacctggA i mm10.chr13 I 7 N 0 s canFam3.chr34 30192770 220 - 42124431 ttaaaaagttct-aagggtaata--aaaggcatttt-----ccaactggccca-aca-------------------------------------------ttagatacattatgtg-ctaacgttaatgggaggaagagagcagtgttgtctttcagtttatttctctcctctcccatccaggagcaccatctacttggaaagcttagaacagacctggttaagagggaactgaatcccaagataggcgagg-----ggatagtggcaagtacattaa i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=110483.000000 s hg38.chr3_KI270935v1_alt 63481 230 + 197351 tgcttccagtgattgcgtcagcagaaccagGGGTGGGAGATGATCTCTCTTTTTGTTGGC-AGATGGTGGTGTCTGCTGTAGCTTTGT-CCCCT-------GGTGACGGGACT-CAGGCAGTAAC--CCCCATCATTGGCAATACCCCCACCTCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCAAGCAGCACAGCCCAGGTGCTG----------------------ACAGG-ATTCAGAGTTAGAGCTTTCTTA s ponAbe2.chr3 199709535 228 + 202140232 TGCTTCCAGTGATTGGGTCAGCAGAACAAGGGATGGGAGATGATCTCTC--TTTGTTGGC-AGATGGTGGTCTCCACTGTAGCTTTGT-CCCCT-------GGTGACGGGACT-CAGGCAGCATC--CCCCATCATTGGCAATACCCCCACCTCTGAGAATGTGGAGAGGACTT-GTGAAGACAATGTTGTCCCCAGCAGCACAGCCCAGGTGCTG----------------------ACAGG-ATTCAGAGTTAGAGCTTTCTTA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29721 228 + 180491593 TGCTTCCAGTGATTGGGTCAGGAGAACCAGGGGTGGGAGATGGTCTCTCTTTTTGTTGGC-AGATGGTGGTCTCCGCTGTAGCTTTG--CCCCT-------GGTGACGGGACT-CAGGCAGCATC--CCCCATCAATGGCAAAACCCCCGCCTCTGAGAATGTGGAGAGCACTT-GTGAAGACAATGTTGTCCC-ACCAGCACGGCCCATGTGCTG----------------------ACAGG-ATTCAGAGCTGGAGGTTTCTTA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 173360 226 - 204313951 TGC-TCCAGTGATTCAGTCTGCAGAACCAGGGCTGGGAGGTGAGCTT----TTTGTTGGC-AGATGGTGGTTTCCGCTGCAGCCTCGC-CCCCT-------GGGGACAGGACT-CAGGCAGAATC--CCCCATCAGTGGCAGTACCCCCACCTTTGAGAATGTGGAGAGGACTTGGGGAAGAAAGTGTTGTCCCACACAGCACAGCCCAGGTGCCA----------------------ACAGG-ATTCAGGGCTGGAGGCTCCTTA i calJac3.chr2 C 0 I 420 s canFam3.chr34 30192990 251 - 42124431 tactttaagtgattgagtctgtagaactaggcAGGGGCTAGGCTGCATCTTTCTGCTGGCGAGGAGACGGTCTCCCCTGTGGCTGCGCATCTCTGCCATGAGGCCACAGGACTCCAGGCAACACCGTCCCCACCAATGGCAGCAATTC-------------ACTGAGAGGACCC--CAAGGCTTAGGCCTGCCCTAGCAGTATGGCCCAGGTGCTGTGCCCCACCCGACCTGTTCCATGCAGACAGTTGGAGCCAGTGGCTCATTA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=4437.000000 s hg38.chr3_KI270935v1_alt 63711 10 + 197351 GAGGTCAGGG s ponAbe2.chr3 199709763 10 + 202140232 GAGGTCAGGG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29949 10 + 180491593 GAGGGCAGGG i rheMac3.chr6 C 0 C 0 s canFam3.chr34 30193241 10 - 42124431 GAAATCAGGG i canFam3.chr34 C 0 C 0 e calJac3.chr2 173586 420 - 204313951 I e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=15629.000000 s hg38.chr3_KI270935v1_alt 63721 33 + 197351 TTGCGGAAGAGGCAGGGACTGCAGCTGCATAGT s ponAbe2.chr3 199709773 33 + 202140232 TTGCAGAAGAGGCAGGGACTGCAGCTGCATAGT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29959 33 + 180491593 TTGCGGAAGAGGCGTGGACTGCAGCTGCATAGT i rheMac3.chr6 C 0 C 0 s calJac3.chr2 174006 31 - 204313951 TTGCGGAAAAGGCAGGGACTGCAGCTGC--GGT i calJac3.chr2 I 420 C 0 s canFam3.chr34 30193251 33 - 42124431 CTGAgggatccctgggtggcgcagcggtttagt i canFam3.chr34 C 0 N 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=32797.000000 s hg38.chr3_KI270935v1_alt 63754 72 + 197351 TTGTATATGTATCAGGCTAGTATCTTTTGTTCTAGACTCATCCATTTGTACATTCATATGAGTATGCATGCA s ponAbe2.chr3 199709806 72 + 202140232 TTGTATAGGTATCAGGCCAGTATCTCTTGTTCTAGACTCATCCATTTGTACATTCATATGAGTATACATGCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 29992 72 + 180491593 TTGTGTATATATCAGGCCAGTATCTCTTGTTCTAGACACATCCATTTGTGCATTCGTATGAGTATGCACGCA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 174037 72 - 204313951 TTGTGTATGTATCAGGCCAGTATTTCTTGTTCTAGACTCGCCCATTTGGACATTGACATGGGTGTGCATGCA i calJac3.chr2 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=2504.000000 s hg38.chr3_KI270935v1_alt 63826 14 + 197351 TGGTGTtttttctt s ponAbe2.chr3 199709878 14 + 202140232 GGGTGttttttctt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 30064 6 + 180491593 GGGTG--------t i rheMac3.chr6 C 0 C 0 s macFas5.chr2 10318 14 + 192460366 gtgtgtctccatct i macFas5.chr2 N 0 C 0 s calJac3.chr2 174109 14 - 204313951 CGGTGTTTTTCTTT i calJac3.chr2 C 0 N 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=76.000000 s hg38.chr3_KI270935v1_alt 63840 5 + 197351 tttct s ponAbe2.chr3 199709892 5 + 202140232 tttct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 30070 4 + 180491593 tttt- i rheMac3.chr6 C 0 C 0 s macFas5.chr2 10332 4 + 192460366 tttt- i macFas5.chr2 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=3094.000000 s hg38.chr3_KI270935v1_alt 63845 10 + 197351 t---------tttcttttt- s ponAbe2.chr3 199709897 19 + 202140232 tttttctttcttttttttt- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 30074 10 + 180491593 ----------ttcttttttc i rheMac3.chr6 C 0 C 0 s macFas5.chr2 10336 10 + 192460366 ----------tttttttttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 9201 10 - 187378091 ----------tttttttttt i papAnu2.chr2 N 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=309106.000000 s hg38.chr3_KI270935v1_alt 63855 288 + 197351 ttttttttttttgagatggagtcttgctgtgtcacccaggctggagtgcagtggcataatcttgcttgactgcaagctccgcattccgggttcaagagattctcctgcctcagccttccgagtagctgggattacaggtgcctgccaccacacttggctaatt-tttgtatttttagtagagatgggggtttcaccatgttggccaggctggtgtcgaactcctgacctca-gtgatccacctgccttggcctcccaaagtgctgggattacaggcattagccactgcgc s ponAbe2.chr3 199709916 287 + 202140232 ttttttttttttgagatggagtcttgctgtgtcacccaggctggagtgcagtggcataatcttggctgactgcaagctctgcattccgggttcaagagattctcctccctcagccttcccagtagctgggattacaggtgcctgccaccacacttggctaatt-tttgtatttttagtagagac-ggggtttcaccatgttggccaggctggtctcgaactcctgacctca-gtgatccacctgccttggcctcccaaagtgctgggattacaggcgtcagccactgtac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 30084 287 + 180491593 cttttctttttggagatggagtctcgctctgtcaggtgggctggagtccagtggcgtcatcttggctcactgcaagctccgcctcccaggttcccgccattctcctgcctcggccgtccgcctagctgggattacaggtccccgccaccacgccccgctaattgttcgtagttttagtagagac-ggggtttcaccgtgttagccaggatggtctctatctcctgacctt--gtgatctgcctgcctcggcctcccaaagtgctggggttacaggcgtgagccaccgcgc i rheMac3.chr6 C 0 N 0 s macFas5.chr2 10346 286 + 192460366 ttttttttttttgagacggagtctcactctgtcacccaggctggagagcagtggtgcggtcttggctcactacaacctcctcctcccgggttcaagagattctgctgcctcagcctcccgagaagctgggactacagg-cgccgccaccacacccggctaagt-tttgtatttttagtagagac-ggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcggcctccc-aagtgctgcgattacaggcgtgagccacggcgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 9211 286 - 187378091 tttttttttttggagatggactctcactctgtcacccaggctggagagcagtggtgcggtctcggctcactacaacctcctcctcccgggttcaagagattctcctgcctcagcctcccgagaagctgggactacagg-cgccgccaccacacccggctaagt-tttgtatttttagtagagac-ggggtttcaccatgttggccaggctggtctcaaactcccgacctcaggtgatccacccgcctcggcctccc-aagtgctgcgattacaggtgtgagccaccgcgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 359878 287 - 91754291 ttttttttttttgagatggactctcactctgtcacccaggctagagagcagtggtgcgatcttggctcactacaacctcctcctcccgggttcaagagattctcctgcctcagacttccgagaagctgggattacaggcacccgccaccacacccggctaatt-tttgtatttttagtagagac-ggggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccgcctcggcctccc-aagtgctgcgattacaggcgtgagccactgcgc i chlSab2.chr15 N 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=9620.000000 s hg38.chr3_KI270935v1_alt 64143 7 + 197351 ccagccG s ponAbe2.chr3 199710203 7 + 202140232 ccagccA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 2120 7 - 192599291 CCAGCCA i rheMac3.chr2 N 0 C 0 s macFas5.chr2 10632 7 + 192460366 ccagcca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 9497 7 - 187378091 ccagcca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 360165 7 - 91754291 ccagcca i chlSab2.chr15 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=275487.000000 s hg38.chr3_KI270935v1_alt 64150 164 + 197351 TATGTC----TCCATCTTTTTATTTCTTGCAATGTGTTGTTAAAGAAGTCAGGTGGTATGTGTACACAAGTAACGTATACTTGTTGAATATTTCTTATTTA-TCATACCCTGTCTCGTTCCAAAAGGATTTTACATGACTTATAATTTTAAtataatccgggg------------gagatg s ponAbe2.chr3 199710210 165 + 202140232 TATGTC----TCCATCTTTTTATTTCTTGCAATGTATTGTTAAAGAAGTCAGGTGGTATGTGTACACAAATAACGTATACTTGTTGAATATTTCttatttactcataccctgtcttgttccaaaaggattttaaatgacttataaTTTTAAtataatctgggg------------gagatg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 2127 177 - 192599291 TATGTc----tccatctttttgtttcttgcaatgtattgttaaagaaatcaagtagtatgtGTACACAAATAATGTTCAGTTATTGAGTATTTCTTTTTTACTCATACCCTGTCTTGTTCCAAAAGGATTTTAAATGACTTataattttaatataatccagggaggggtaagcgtgagatg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 10639 177 + 192460366 tatgtc----tccatctttttatttcttgcaatgtattgttaaagaaatcaagtagtatgtGTACACAAATAATGTTCAGTTATTGAGTATTTCTTTTTTACTCATACCCTGTCTTGTTCCAAAAGGATTTTAAATGACTTATAATTTTAATATAATCCGGGGAGGGGTAAGCGTGAGATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 9504 177 - 187378091 tatgtc----tccatctttttatttcttgcaaTGTATTGTTAAAGAAATCAAGTAGTATGTGTACACAAATAATGTTCAGTTattgagtatttcttttttactcaTACCCTGTCTTGTTCCAAAAGGATTTTAAATgacttataattttaatataatccgGGGAGGGGTAAGCGTGAGATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 360172 177 - 91754291 tatgcc----tccatctttttatttcttgcaatgtattgtaaaagaaatcaggtagtatgtGTACACAAATAACGTTCAGTTATTGAGTATTTCTTTTTTACTCATACCCTGTCTTGTTCCAAAAGGATTTTAAATGACTTATAATTTTAATGTAATCCGGGGAGGGGTAGGCGTGAGATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 849686 169 - 74750902 tatgtctctgtccgtctttttatttCTTGCAATGTGTCGTTAAAGAAATCAGGTGGTGTGTGTACGCAAATAACATGCAATTATTGAGTACTTCttgtttactcgtaccctgtcttgtgccaaaaagatttaaaatgacttatgatattaatataatctggga------------ggggtg i calJac3.chr17 N 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I e panTro4.chr3_GL389630_random 26197 12 + 103936 I a score=700512.000000 s hg38.chr3_KI270935v1_alt 64314 337 + 197351 ggcagattcagctctgggaggccagcagaatggcttttaggtcctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacaggattagaggttagccagatgaaaagaAATCAAGAGAGGAGAGAGGAGCCCCCACAAAGGACTGACCCAGGGCAAT---AAC--GGGGAAAGAACTTGGAGGTACAGAGGCAGACCTTGGTGTTTCCCAGGGTGTGGGACGTTGGGGGTAGTAAGGCTGGAGTGGGTAGAGGAAAGGGCTAGGGTGACA-CCACGGGGTATTAGGTGGAACTGagggaaacagaaataggagcagagaaaagggaatg s panTro4.chr3_GL389630_random 26209 339 + 103936 ggcagattcagctctggcaggccagcagaatggcttttaggtcctccttggattcagaaaatacttcttgaaagatatttgaggtaaatcttacaggattagaggttagccagatgaaaagaaatcaagagaggagagaggagcccccacaaaggactgacacagggcaat---aacagggggaaagaacttggaggtacagaggcagaccttggtgtttcccagggtgtgggacgttgcgggtagtaaggctggagtgggtagaggaaagggctagggtgaca-ccacggggtattaggTGGAACTGAGGGAAACAGAAATAGGACCAGAGAAAAGGGAATG i panTro4.chr3_GL389630_random I 12 C 0 s ponAbe2.chr3 199710375 342 + 202140232 ggcagattcagctctgggaagccagcagaatggcttttaggtcctccttggattcagaaaatacttcctgaaagatatttgagctaaatcttacaggactagaggttagccagatgaaaagaaatcaagagaggagagaggagctcccacaaagggctgacccagggcaatgagaacagggggaaagagcttggaggtacagaggcagaccttggtgtttcccagggtgtgggacgttgggggtagtaaggctggagcgggtagaggaaagggctagggtgaca-ccacaggatattaggtggaactgagggaaacagaaataagaGCAGAGAAAAGGGAATG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 2304 336 - 192599291 -ggagattcagctctgggaggccagcagaatggcttttaggtcctccttggattcagaaaatacttctcgaaagagattcgagctaaatcttacaggattagaggttagccggatgataataaatcaagagggaaaagaggagctcctgcaaagggctgacccagggcagtgagaaca-ggggaaagagctcggaggta--gaggcagaatctggtgtttcctggggtgcgggacgttaggggtagtaaggctggagtgggtagaggaaaggGCTAGGGTGACA-CCCCGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 10816 336 + 192460366 -GGAGATTCAgctctgggaggccagcagaatggcttttaggtcttccttggattcagaaaatacttctcgaaagagattcgagctaaatcttacaggattagaggttagccggatgataataaatcaagaggggaaagaggagctcccgcaaagggctgacccagggcagtgagaaca-gggaaaagagctcggaggta--gaggcagaatctggtgtttcctggggtgcaggacgttaggggtagtaaggctggagtgggtagaggaaaggGCTAGGGTGACA-CCCCGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 9681 336 - 187378091 -GGAGATTCAGCTCTGGGAGGCCAGCAGAATGGCTTTTAGGTCCTCCTTGGATTCAGAAAATACTTCTCGAAAGAGATTCGAGCTAGATCTTACAGGATTAGAGGTTAGCCGGATGACAATAAAtcaagagaggaaagaggagctCCCGCAAAGGGCTGACCCAGGGCAGTGAGAACA-GGGGAAAGAGCTCGGAGGTA--GAGGCAGAATGTGGTGTTTCCTGGGGTGCGGGACGTTGGGGGTAGTAAGGCTGGAGCGGGTAGAGGAAAGGGCTAGGGTGACA-CCACGGGGTATTAGGCGGAACTGAGGGAAAC--AAATAGGAGCAGGGAAAAGGGAACG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 360349 338 - 91754291 -GAAGATTCAGCTCCGGGAGGCCAGCAGAATGACTTTTAGGTCTTCCTTGGATTCAGAAAATACTTCTCGAAAGAGATTCGAGCTAAATCTTACAGGATTAGAGGTTAGCTGGATGATAATAAATCAAGAGAGGAAATAGGACCTCCCGCAAAGGGCTGACCCAGGGCAGTGAGAACA-GGGGAAAGAGCTCGGAGGTACGGAGGCAGAATTTGGTTTTTCCCGGGGTGTAGGATGTTGGGGAAAGTAAGGCTGGAGCGGGTAGAGGAAAGGGCTAGGGTGACA-CCACAGGGTATTAGGCGGAACTGAGGGAAAC--AAataggagcagggaaaagggaatg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 849855 311 - 74750902 ---------ag---tgtgagatgggcagaatggcttttaggtcctccttggattcagaaaatacttctctaaagagatttgagctaaatcttacaggattagaggtaagctggatgaaaataaaccaagagaggaaacaggggct-ctgcaaaggcctgac-------------agcg---ggaaagagcttggaggtaaagaggcaga-tttggtgattccc-gagtgtaggacgttggggacagtaaggctgcagcgggtggaggaaagggctggggcgacacccatggggcaTTAGGTGGAGCTGAGGGAAACAGAAACGGGGGC-GCGAAAAGGGAATA i calJac3.chr17 C 0 I 316 e nomLeu3.chr11 120806746 10 + 123690457 I a score=339308.000000 s hg38.chr3_KI270935v1_alt 64651 160 + 197351 agaacgggaaagagggaggtgggaaatagaagagggaGTTTCCAAACAGCAACAACAACAGAAACAAGTGTTTTGGGTTGTGGAGCGTTTGCCCTGCAGAGAGCTGGGTCTGCCCTTGTCCCTTTTGGGGATTATGAATCAGTGCGTGG-AGCCGCGCGGC- s panTro4.chr3_GL389630_random 26548 160 + 103936 AGAACGGGAAAGAGGGAGGTGGGAAATAGAAGAGGGAGTTTCCAAACAGCAACAACAACAGAAACAAGTGTTTTGGGTTGTGGAGCATTTGCCCTGCAGAGAGCTGGGTCTGCCCTGGTCCCTTTTGGGGATTATGGATCAGTGGGTGG-AGCCATGCGGC- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199710717 160 + 202140232 AGAACGGGAAAGAGGGAGGTGGGAAATGGGAGAGGGAGTTTCCAAACAGCAACAACAACAGAAACAAGTGTATTGGGTTGTGGAGCGTTTGTCCTGCAGAGAGCTGGGTCTGCCCTGGTCCCTTTTGGGGATTATGGATCAGTGGGTGG-AGCCGCGCGGC- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 2640 159 - 192599291 AGAACGGAAAAGAGGGAGGTGGGAAATAGGAGAGGGAGTTTCCAAACAGCAAC-ACAACAGAAACAAGTGTATTGGGTTGTGGAGCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTGGGGATTATGGATCAGCGCGTGG-AGCTGCGCGGC- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 11152 159 + 192460366 AGAACGGAAAAGAGGGAGGTGGGAAATAGGAGAGGGAGTTTCCAAACAGCAAC-ACAACAGAAACAAGTGTATTGGGTTGTGGAGCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTGGGGATTATGGATCAGCGCGTGG-AGCTGCGCGGC- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 10017 159 - 187378091 AGAACGGAAAAGAGGGAGGTGGGAAATAGGAGAGGGAATTTCCAAACAGCAAC-ACAACAGAAACAAGTGTGTTGGGTTGTGGAGCATTTGCCCTGGTGAGAGCTGGGTCTGCCCTGGACATTTGTGGGGATTATGGATCAGTGCGTGG-AACTGCGCAGC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 360687 159 - 91754291 agaacgggaaacagggaggtgggaaataggagagggagTTTCCAAACAGCAAC-ACAACAGAAACAAGTGTATTGAGTTGTGGAGCATTTGCCCTGGAGAGAGCTGGGTCTGCCCTGGACATTTGTGGGGATTATGGATCAGTGCATGG-AGCCGCGCGGC- i chlSab2.chr15 C 0 I 102 s calJac3.chr17 850482 162 - 74750902 AGAACAGGAAAGAGAGAGGGGGGAAATAGGAAAGGGAATTTCCAAACAGCAAGAACAGCAGAAACAAGTTTATTGGGTTGTGGAGCATTTGCCCTGCACGACGCTGTGTCCGGCCGGGATGCTCTTGAGGATTGTGTATCAGTGCGTATCAGCCGCGTGAGT i calJac3.chr17 I 316 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=42644.000000 s hg38.chr3_KI270935v1_alt 64811 17 + 197351 CACATCCACCATTCACT s panTro4.chr3_GL389630_random 26708 17 + 103936 CACATCCACCATTCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199710877 17 + 202140232 CACATCCACCATTCACT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 2799 17 - 192599291 CACATCCACCATTCACT i rheMac3.chr2 C 0 I 342 s macFas5.chr2 11311 17 + 192460366 CACATCCACCATTCACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 10176 17 - 187378091 CACATCCACCATTCACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 360948 17 - 91754291 CACATCCACCATTCACT i chlSab2.chr15 I 102 C 0 s calJac3.chr17 850644 17 - 74750902 CACATTCACCATTTGCT i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=37393.000000 s hg38.chr3_KI270935v1_alt 64828 17 + 197351 TGCACTTGAGTGACAGC s panTro4.chr3_GL389630_random 26725 17 + 103936 TGCACTTGAGTGACAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199710894 17 + 202140232 TGCACCTGAGTGACAAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 3158 17 - 192599291 TGCACCTGAGTGACAGC i rheMac3.chr2 I 342 C 0 s macFas5.chr2 11328 17 + 192460366 TGTATCTGAGTGACGGC i macFas5.chr2 C 0 I 361 s papAnu2.chr2 10193 17 - 187378091 TGTATCTGAGTGACGGC i papAnu2.chr2 C 0 I 259 s chlSab2.chr15 360965 17 - 91754291 TGCACCTGAGTGACAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 850661 17 - 74750902 TGCACTTGAATGACAGC i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=517229.000000 s hg38.chr3_KI270935v1_alt 64845 239 + 197351 CAAGCTACAGTCATGAATACG----TTTCTTTCTTTTTACAgaagaacagtaaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatcTGGTGCTGCATTGGAATCATCCCAAAAAACCAAGGCTTGCATTGCATATCTATCTGCTGTCTGCTGAAGGAGCCCTGTCTGTGTGCCCA s panTro4.chr3_GL389630_random 26742 239 + 103936 CAAGCTACAGTCATGAATACG----TTTCTTTCTTTTTAAAGAAGAACAGTAAATTGActttattccttatgaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatcTGGTGCTGCATTGGAATCATCCCAAAAAACCAAGGCTTGCATTGCATATCTATCTGCTGTCTGCTGAAGGAGCCCTGTCTGTGTGCCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199710911 239 + 202140232 CGAGCTACAGTCATGAATACG----TTTCTTTCTTTTTAAAGAAGAACAGTAAATTGActttattccttataaaggtgatactggagaacgtgacatagatttgctggcacatgggtttcctatgagcaaaccccagaattggacacacgtatccaGTGCTACATTGGAACCATCCCAAAAAACCAAGGCTTGCATTGCATATCTGTCTGCTGTCTGCTGAAGGAGCCCTGTCTGTGTGCCCG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 3175 238 - 192599291 CAAGCTACAGTCATGACTACGTTTCTTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGTGCTACATTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCATATCTATCTGCTGCCTGCTGAAGGAGCCCTGTCTGTGTGCC-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 11706 236 + 192460366 CAAGCTACAGTCATGACTACG----TTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatacatttgctggcacatgggtttcctatgaacaaaccccagaattggacagacgtatccaGCGCTACATTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCATATCTATCTGCTGCCTGCTGAAGGAGCCCTGTCTGTGTGCCCA i macFas5.chr2 I 361 T 18 s papAnu2.chr2 10469 240 - 187378091 CAAGCTACAGTCATGACtacgtttctttctttcttttta---aagaacaataAATTGACTTTATTCCTTATAAAGGTGATACTGGAGAATGTGACATAGATTTGCTGGCACATGGGTTTCCTATGAACAAACCCCAGAATTGGACAGACGTATCCAGTGCTACATTGGAACCATCCCAAAAAACCAAGGCCTGCATTGCATATCTATCTGCTGCCTGCTGAAGGAGCCCTGTCTGTGTGCCCA i papAnu2.chr2 I 259 T 18 s chlSab2.chr15 360982 233 - 91754291 CAAGCTACAGTCATGACTACG----TTTCTTTCTTTTta---aagaacaataaattgactttattccttataaaggtgatactggagaatgtgacatagatttgctggcacatgggtttcctatgaacaaaccccagaattggacagatgtatccaGTGCTACACTGGAACCATCCC-AAAAACCAAGGCCTGCATTGCATATCTATCTGCTGTCTGCTGAAGGAGCCCTGTCTGTGTGCC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 850678 209 - 74750902 TAAGCTACAGTTACGGCTACA----TTTCTTTCTTTTTTT--AAGAACAGTAAATTGActtcgttccttataaagctgatactggagaatgtgacatagattcgctggcatgtgggtttcctgtgaataaaccccaaaactggacagacttacccaGTGCTACATTGGGACCATCACAGAAAGCCAAGGCCTGCATTCTGTATCTCCCTGTTGTC---------------------------- i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=7913.000000 s hg38.chr3_KI270935v1_alt 65084 50 + 197351 AGGA-AGTGACATCCTTGCCAAGGGCTGTCCCTGTCGCAGGAGATGAAGGA s panTro4.chr3_GL389630_random 26981 50 + 103936 AGGA-AGTGACATCTTTGCCAAGGGCTGTCCCTGTCGCAGGAGATGAAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711150 51 + 202140232 AGGACAGTGGCTTCCTTGCCAAGTGCTGTCCCTGTCGCAGGAGATGAAGGA i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 850887 6 - 74750902 --------------------------------------------TGAAGG- i calJac3.chr17 C 0 C 0 e rheMac3.chr2 3413 0 - 192599291 C e chlSab2.chr15 361215 0 - 91754291 C e macFas5.chr2 11942 18 + 192460366 T e papAnu2.chr2 10709 18 - 187378091 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=8917.000000 s hg38.chr3_KI270935v1_alt 65134 10 + 197351 GCCCTGTCTA s panTro4.chr3_GL389630_random 27031 10 + 103936 GCCCTGTCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711201 10 + 202140232 GCCCTGTCTA i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 10691 10 - 187378091 GCCCTGTCTG i papAnu2.chr2 T 18 C 0 s calJac3.chr17 850893 10 - 74750902 GCCCTGTCTA i calJac3.chr17 C 0 C 0 e rheMac3.chr2 3413 0 - 192599291 C e chlSab2.chr15 361215 0 - 91754291 C e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=1692.000000 s hg38.chr3_KI270935v1_alt 65144 3 + 197351 TGT s panTro4.chr3_GL389630_random 27041 3 + 103936 TGT i panTro4.chr3_GL389630_random C 0 I 69 s ponAbe2.chr3 199711211 3 + 202140232 TGT i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 10701 3 - 187378091 TGT i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 3413 0 - 192599291 C e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361215 0 - 91754291 C e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=61968.000000 s hg38.chr3_KI270935v1_alt 65147 49 + 197351 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA s panTro4.chr3_GL389630_random 27113 49 + 103936 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panTro4.chr3_GL389630_random I 69 C 0 s ponAbe2.chr3 199711214 49 + 202140232 GCCCAAGGACAGTGGCTTCCTTGCCAAGGTCTGTCCCTGTTGCAGGAGA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 3413 46 - 192599291 ---CAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i rheMac3.chr2 C 0 I 36 s papAnu2.chr2 10704 49 - 187378091 GCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i papAnu2.chr2 C 0 T 69 s chlSab2.chr15 361215 46 - 91754291 ---CAAGGACAGTGGCTTCCTTGCCAAGGGCCGCCCCTATTGCAGGAGA i chlSab2.chr15 C 0 I 37 e calJac3.chr17 850903 0 - 74750902 C e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=3984.000000 s hg38.chr3_KI270935v1_alt 65196 7 + 197351 TGAAGGA s panTro4.chr3_GL389630_random 27162 7 + 103936 TGAAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711263 7 + 202140232 TGAAGGA i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 10684 7 - 187378091 TGAAGGA i papAnu2.chr2 T 69 C 0 e rheMac3.chr2 3459 36 - 192599291 I e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361261 37 - 91754291 I e macFas5.chr2 11942 18 + 192460366 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=7509.000000 s hg38.chr3_KI270935v1_alt 65203 13 + 197351 GCCCTGTCTATGT s panTro4.chr3_GL389630_random 27169 13 + 103936 GCCCTGTCTATGT i panTro4.chr3_GL389630_random C 0 T 138 s ponAbe2.chr3 199711270 9 + 202140232 GCCCTGTGT---- i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 11924 13 + 192460366 GCCCTGTCTGTGT i macFas5.chr2 T 18 C 0 s papAnu2.chr2 10691 13 - 187378091 GCCCTGTCTGTGT i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 3459 36 - 192599291 I e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361261 37 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=42314.000000 s hg38.chr3_KI270935v1_alt 65216 49 + 197351 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA s panTro4.chr3_GL389630_random 27044 49 + 103936 GCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panTro4.chr3_GL389630_random T 138 C 0 s ponAbe2.chr3 199711279 49 + 202140232 GCCTGAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCTGGAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 11937 49 + 192460366 GCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i macFas5.chr2 C 0 T 69 s papAnu2.chr2 10704 49 - 187378091 GCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i papAnu2.chr2 C 0 T 69 e rheMac3.chr2 3459 36 - 192599291 I e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361261 37 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=59871.000000 s hg38.chr3_KI270935v1_alt 65265 69 + 197351 TGAAGGAGCCCTGTCTATGTGCTCAAGGGCAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA s panTro4.chr3_GL389630_random 27093 69 + 103936 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711328 69 + 202140232 TGAAGGAGCCCTGTCTATGAGCCCAAGGACAGTGGCTTCCTTGCCAAGGTCTGTCCCTGTCGCAGGAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 11917 69 + 192460366 TGAAGGAGCCCTGTCTGTGTGCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i macFas5.chr2 T 69 T 44 s papAnu2.chr2 10684 69 - 187378091 TGAAGGAGCCCTGTCTGTGTGCCCAAGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAGA i papAnu2.chr2 T 69 T 44 e rheMac3.chr2 3459 36 - 192599291 I e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361261 37 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=18086.000000 s hg38.chr3_KI270935v1_alt 65334 80 + 197351 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGGCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGCC----C s panTro4.chr3_GL389630_random 27162 80 + 103936 TGAAGGAGCCCTGTCTATGTGCTCAAGGACAGTGCCTTCCTTGCCAAGGGCTGTATCTGTTGCAGGAGATGAAGGAGTC----C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711397 80 + 202140232 TGAAGGAGCCCTG----TGTGCCTGAGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTTGCAGGAGATGAAGGAGCCTTGTC i ponAbe2.chr3 C 0 C 0 e rheMac3.chr2 3459 36 - 192599291 I e calJac3.chr17 850903 0 - 74750902 C e chlSab2.chr15 361261 37 - 91754291 I e macFas5.chr2 11986 44 + 192460366 T e papAnu2.chr2 10753 44 - 187378091 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=4013.000000 s hg38.chr3_KI270935v1_alt 65414 10 + 197351 TGTGTGCCTG s panTro4.chr3_GL389630_random 27242 10 + 103936 TGCGTGCCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711477 10 + 202140232 TATGTGCCCA i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 850903 10 - 74750902 TGTGTGCCCA i calJac3.chr17 C 0 C 0 e rheMac3.chr2 3459 36 - 192599291 I e chlSab2.chr15 361261 37 - 91754291 I e macFas5.chr2 11986 44 + 192460366 T e papAnu2.chr2 10753 44 - 187378091 T e nomLeu3.chr11 120806746 10 + 123690457 I a score=88372.000000 s hg38.chr3_KI270935v1_alt 65424 116 + 197351 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATATAC------CTCCTCACATACTCACCA s panTro4.chr3_GL389630_random 27252 116 + 103936 AGGACAGTGGCTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCTTTCTTAGAGAAATAGGTCTCAAAGTGAATGAATATAC------CTCCTCACATACTCACCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711487 116 + 202140232 AGGACAGTGGTTTCCTTGCCAAGGGCTGTCCCTGTAGCAGGGG-AAAGCCTTTCAGGACCCCTTCTTAGAGAAATAAGTCTCAAAGTGAATGAATATAC------CTCCTCACATACTCACCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 11942 81 + 192460366 AGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAG-AAAGCCTTTCAGGACCCC-TCTTACAGAAACACATCTCA---------------------------------------- i macFas5.chr2 T 44 C 0 s papAnu2.chr2 10709 81 - 187378091 AGGACAGTGGCTTCCTTGCCAAGGGCCATCCCTATTGCAGGAG-AAAGCCTTTCAGGACCCC-TCTTACAGAAACATGTCTCA---------------------------------------- i papAnu2.chr2 T 44 C 0 s calJac3.chr17 850913 122 - 74750902 AGGAAAGTGACTTCCTTGTTGCGGGCTATCCCTGTCGCAGGAGAAAAGTCTTTCAGACACCT-TCTTAGAGAAATGCTTCTCAAAGTGAATAAATGAACCTTGTGCTCCTTACATACTCACCA i calJac3.chr17 C 0 C 0 e rheMac3.chr2 3459 36 - 192599291 I e chlSab2.chr15 361261 37 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=158285.000000 s hg38.chr3_KI270935v1_alt 65540 73 + 197351 AGCAGCCTGCAGAGGATACAGCTTTCCATGTGGCTCAGGGAACAGTTGATATCAACAGTCTCTCAATTCCT------TT s panTro4.chr3_GL389630_random 27368 79 + 103936 AGCAGCCTGCAGAGGATACAGCTTTCCATGTGGCTCAGGGAACAGTTTATATCAACAGTCTCTCAATTTCTttattatt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711603 73 + 202140232 AGCAGCCTGCAGAGGATACAGCTTTCCATGTGGCTCAGGGAACAGTTGATATCAACAGtctctcaatttct------tt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 3495 74 - 192599291 AGCAGCCTGCAGAGGATACAGCTTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAATTTGA-----ATT i rheMac3.chr2 I 36 C 0 s macFas5.chr2 12023 73 + 192460366 -GCAGCCTGCAGAGGATACAGCTTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAATTTGA-----ATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 10790 73 - 187378091 -GCAGCCTGCAGAAGATACAGCTTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCaatttga-----att i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 361298 74 - 91754291 AGCAGCCTGCAGAGGATATAGCTTTCCATGTGGCTCAGGGAGCAGTTGATATCAACATTCTCTCAATTTGA-----ATT i chlSab2.chr15 I 37 C 0 s calJac3.chr17 851035 73 - 74750902 AGCAACCTGCAGCAGACACAACTTTCCAAATGGCTCAAGGAGCAGTTTATATCGACATTCTCTCAAtttct------tt i calJac3.chr17 C 0 I 957 e nomLeu3.chr11 120806746 10 + 123690457 I a score=482362.000000 s hg38.chr3_KI270935v1_alt 65613 297 + 197351 Atta-ttattattattatactttaagttctgggatacatg------------------------------------------------------------------tgcagaacgtgcagcgttgttacataggtatatatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaacaggcaccggtgtgtgatgttcccctccctgtgtccatatgttctcattgttcaacttccacttatgagtgagaacatgcagtgtttggttttctgttcctgtgttagtttgctgagaatgatggtttccag s panTro4.chr3_GL389630_random 27447 297 + 103936 atta-ttattattattatactttaagttctgggatacatg------------------------------------------------------------------tgcagaacatgcagggttgttacataggtatatatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaacaggcaccagtgtgtgatgttcccctccctgtgtccatatgttctcattgttcagctcccacttatgagtgagaacatgtggtgtttggttttctgttcctctgttagtttgctgagaatgatggtttccag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199711676 360 + 202140232 atta-ttattattatta---ttaaagttttgggatacatgtgccggacgtgcaggtttgttacataggtatatatgtgccatggtggtttgctgcannnnnnnnnntgcaggacgtgcaggtttgttacataggtatatatgtgccatggtggtttgctgcacccataaacctgtcatctacattgggtatttctcctaatgctatccctccccttgcccccaacctcccaacaggcactggtgtgtgatgttctcctccctgtgtccatatgttctcattgttcaactcccacttatgaatgagaacatgcagtgtttggttttctgttcctgtgttagtttgctgagaatgatggtttccag i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 3569 294 - 192599291 Attatttattattattatactttaagttctggg--acatg------------------------------------------------------------------tgcagaacgtgcaggtttgtttcataggtatgtacgtgccatggt-gtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctgccccagccccccaccccctgacaggccccggtgtgtgatgttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctttggttttctattcctgtgatagtttgctgagaatgatggtttccag i rheMac3.chr2 C 0 M 585 s macFas5.chr2 12096 294 + 192460366 Attatttattattattatactttaagttctggg--acatg------------------------------------------------------------------tgcagaacgtgcaggtttgtttcataggtatgtacgtgccatggt-gtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctgccccagccccccaccccctgacaggccgcggtgtgtgatgttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctttggttttctattcctgtgatagtttgctgagaatgatggtttccag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 10863 295 - 187378091 attatttattattattatactttaaattctgggatacatg------------------------------------------------------------------tgcagaacatgcaggtttgtttcataggtatgTACATGCCGTggt-gtttgctgcacccatcaacccgtcagcTCCGTtgggcatttctcctaatgctctccctgccccag-cccccaccccctgacaggccccagtgtgtgatgttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctttggttttctattcctgtgatagtttgctgagaatgatggtttccag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 361372 297 - 91754291 Attatttattattattatactttaagttctgggatacacg------------------------------------------------------------------tgcagaacgtgcaggtttgtttcataggtatatatgtgccatggcggtttgctgcacccatcaacccgtcatctacattgggtatttctcctaatgctctccctcccctagccccctaccccctgacagtccctggtgtgtgatgttcccctccct-tgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcggtctttggttttctattcctgtgatagtttgctgaaaatgatggtttccag i chlSab2.chr15 C 0 C 0 e calJac3.chr17 851108 957 - 74750902 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=573318.000000 s hg38.chr3_KI270935v1_alt 65910 446 + 197351 tgtcatccatgatcctgcaaaggacatgaactcat-ccttttttatggctgcatagtattccatggtgtctatgtgccacattttctttaaccagtctgtcattgatgggcatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacatgtgctcggggctgggcgcggtggctcaaacctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcaagaccattctggccaacatggtgaaaccccttctctagtaaaatgcaaaaaattagctgggcgtggtggtgtgtgcctgtagttccagctactcaggaggctgaggcaagagaatcgcttgaacccgggaggtggaggttgcagtgagccgagaccgtgccactgcactccagcctggcaacagagcaagact s panTro4.chr3_GL389630_random 27744 446 + 103936 tgtcatccatgtccctgcaaaggacatgaactcat-ctttttttatggctgcatagtattccgtggtgtctatgtgccacattttctttaaccagtctatcattgatggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacatgtgcttggggctgggcgcggtggctcaaatctgtaatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagatcaagaccatcctggccaacatggtgaaaccccttctctagtaaaatgcaaaaaattaaccaggcgtggtggtgtgtgcctgtagttccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagccgagaccgtgccactgcactccagcctggtaacagagcaagact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199712036 446 + 202140232 tgtcatctatgtccctgcaaaggacatgaactcat-ccttttttatggctgcatagtattccgtggtgtctatgtgccacattttctttaaccagtttatgattgatgggcatttgggttggttccaagtctttgctattgtgaatagtgccgcaataaacatacatgtgcttggggctgggcatggtggctcaaacctgtaatcccagcacttcgggaggctgaggcgggtggatcatgaggtcaggagatcaagaccatcctggtcaacatggtgaaaccccatctctagtaaaatgcaaaaaattagccgggcatggtggtgtgtgcctgcagttccagctactcgggaggctgaggcaggagaatcacttgaaactgggaggtggaggttgcagtgagccgagaccgcaccactgcactccagcctggtaacagagcaagact i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 12390 447 + 192460366 cttcatccatgtccctgcaaaggacatgaactcatgctttttttatggctgtatagtattccatagtgtatatgtgccacattttctttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagtgctgcaataaacatatgtgtgcttggggatgggcacgatggctcacgcctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagatcgagaccatcctggccaacatggtgaaaccccgtctctagtaaaatgcaaaaaattagccaggcgtggtggtgtgtgcctgtggttccagctactcgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagccgagactatgccattgcactccagcctggtgacagagcaagact i macFas5.chr2 C 0 C 0 s papAnu2.chr2 11158 446 - 187378091 cttcatccatgtccctgcaaaggacatgaactcat-ccttttttatggctgtatagtattccatagtgtatatgtgccacattttctttatccagtctatcattgatggacatttgggtaggttccaaatctttgctattgtgaatagtgctgcaataaacatatgtgtgcttggggatgggcacgatggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggccaacatggtgaaaccccgtctctagtaaaatgcaaaaaattagccaggcgtggtggtgtgtgcctgtggttccagctactcgggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagccgagactatgccattgcactccagcctggtgacagagcaagact i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 361669 447 - 91754291 cttcatccatatccctgcaaaggacatgaactcatcccttttttatggctgcatagtattccatggtgtatatgtgccacattttctttatccagtctatcattgatggatgtttgggtaggttctaaatctttgctattgtgaatagtgctgcaataaacatatgtgtgcttgGggctgggcacgatggctcacgcctgtaatcccaacactttgggaagctgaggcgggtggatcacaaggtcaggagatcgagaccatcctggccaacatggtgaaacctcgtctctagtaaaatgcaaaaaattagccaggcgtggtggtgtgtgcctgtagttccagctactcgggaggctgaggcaggagaatcacttgagcttgggaggtggaggttgcagtgagctgagaccgtgccattgcactccagcctggtgacagagcaagact i chlSab2.chr15 C 0 I 82 e rheMac3.chr2 3863 585 - 192599291 M e calJac3.chr17 851108 957 - 74750902 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=8700.000000 s hg38.chr3_KI270935v1_alt 66356 17 + 197351 ccgtctcaa----aaataa-------------ta s panTro4.chr3_GL389630_random 28190 21 + 103936 ccgtctcaaaaataaataa-------------ta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199712482 21 + 202140232 ccgtctcaaaaataaataa-------------ta i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 12837 32 + 192460366 --gtatcaaaaataaataaataaataaataagca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 11604 32 - 187378091 --gtatcaaaaataaataaataaataaataagca i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 3863 585 - 192599291 M e calJac3.chr17 851108 957 - 74750902 I e chlSab2.chr15 362116 82 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=170095.000000 s hg38.chr3_KI270935v1_alt 66373 139 + 197351 aataaacatacgtgtgcatgtgtctttacagtagaatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatcgccacactgtcttccacaat s panTro4.chr3_GL389630_random 28211 139 + 103936 aataaacatacgtgtgcatgtgtctttacagtagaatgagttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatcgccacactgtcttccacaat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199712503 139 + 202140232 cataaacatacgtgtgcatctgtctttatagtagaatgatttataatcctttgggtatatacccagtaatgggattgctgggtcaaatggtatttctagttctagatccttgaggaatggccacactgtcttccacaat i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 12869 139 + 192460366 aacaaacgtatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctagtgctagatccttgaggaatcgccacactgtcttccacaat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 11636 139 - 187378091 aacaaatgtatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggcatatacccagtaatgggatggctgggtcaaatggtatttctagcgctagatccttgaggaatcgccacactgtcttccacaat i papAnu2.chr2 C 0 C 0 s calJac3.chr17 852065 139 - 74750902 aataagcatatgtgtgcatgtgtcctttcagtagagtgatttataatccatcgagtatatacccagtaatgggattgctgggtcaaatggtgtttctagttgtaggtccttgaggagtctccacaccgtcttccacaat i calJac3.chr17 I 957 C 0 e rheMac3.chr2 3863 585 - 192599291 M e chlSab2.chr15 362116 82 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=220874.000000 s hg38.chr3_KI270935v1_alt 66512 134 + 197351 ggttgaactaatttgcactcccaccaacagtgtaaaactattcctatttctctacatcctctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatgatatctcattgtggt s panTro4.chr3_GL389630_random 28350 134 + 103936 ggttgaactaatttgcactcccaccaacagtgtaaaaatgttcctatttctctacatcctctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199712642 134 + 202140232 ggttgaactaatttgcactcccacaaacagtgtaaaaacattcctatttctctacatcctctccagcatctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcgttgtggt i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 13008 134 + 192460366 ggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctgttcctccacatcctctgcagcacttgttgtttcctgactttataatgatcaccattctacctggagtgagatggtatctcattatggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 11775 134 - 187378091 ggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttataatgattgccattccacctggagtgagatggtatctcattgtggt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 362198 134 - 91754291 ggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctacctggtgtgagatggtaactcattgtggt i chlSab2.chr15 I 82 C 0 s calJac3.chr17 852204 132 - 74750902 gggtgaactaatttacactcccaccagcagtgtaaaagcgtttctatttctccacatcctctccagcatctgttgtttcccgactt--taatcattgccattctaactggcgcgagatggtatctcacgggagt i calJac3.chr17 C 0 C 0 e rheMac3.chr2 3863 585 - 192599291 M e nomLeu3.chr11 120806746 10 + 123690457 I a score=2061286.000000 s hg38.chr3_KI270935v1_alt 66646 965 + 197351 tttgatttgcatttctctaatgatcagtgacgatgag-tttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgatggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcggatggatagattgcaaaaattttcttccattctgtaggttgcctgttcactctgcctggtcatatgcagaaaaccgaaactagaccccttgctgaca-cttatacaaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaaatcctagaagaaaacctaggcaacaccattgaggacgtaagcatgggcaaagac-ttcatgactaaaacaccaaaagaaatggcaacaaaagccaaaattgacaaaaggtatctaatgaaactagagagcttctgcacagcaTGACTGTATTTCAGTGCACGTTTACCACCGAGCTCTTAACGCTCCACCACTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGCGGggg--ggccggtcggcggcggaggggccagtggg--gacccggggcaggg-gCGGAGACCCCTCCCACTGCACATCCCACTGCCTGGGTATCT-GGCCCCCAACCGGCCTGCCCGCTGCTCCCACCTCCCATGGtgggtcgggggctgagggctggggactggggcagggTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATAACCTCTCACTTGCAATTCTCAGCCCCTTCCTGCATTGTCTCCCTGTGAGACCTACTAGAA--CCCCCGCCTTTCACACTGCTGACCTGCTGGGGGAAAATGCACAGAGGCAGAGACGAGGCCACGCG s panTro4.chr3_GL389630_random 28484 969 + 103936 tttgatttgcatttctctaatgatcagtgacgatgagctttttttcgtatgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatcctttgcacactttctgacggggttgtttg-----ttcttgtaaatttacttaagttccttgtaaattctggatatcagccctttgttggatggatagattgcaaaaatttttttccattctgtaggttgcctgttcactctggctggtcatatgcagaaaaccgaaactagacccctttctgacaccttatataaaaattaactcaagatgcattaaagatttaaacgtgagacctaaaaccagaaaaatcctagaagaaaacctaggcaataccattgaggacataagcatgggcaaagactttcatgactaaaacaccaaaaggaatggcaacaaaagccaaaattgacaaaaggtatctaatgaaactagagagcttctgcacagcaTGACTGTATTTCAGTGCACGTTTACCACCGAGCTCTTAACGCTCCACCACTGTCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC-GGGG--GACCAGTGGGCGGCAGAGGGGCCAGTGGG--GACCCGGGGCAGGG-GCGGAGACCCCTCCCACTGCACATCCCACTGCCTGGGTATCT-GGCCCCCAACCGGCCTGCCCGCTGCTCCCACCTCCCATGGTGGGTCGGGGGCTGGGGGCTGGGGACTGGGGCAGGGTACCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCGTGCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTCAGCCCCTTCCTGCATTGTCTCCCTGTGAGACCTACTAGAA--CCCCCACCTTTCACACTGCTGACCTGCTGGGGGAAAATGCACAGAGGCACAGACAAGGCCACGCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199712776 965 + 202140232 tttgatttgcatttctgtaatgatcagtgatgatgtgctttttttcatgtgtcttttggctgcataaatgtcttcttttgaaaagtgtctgctcatatccttcgcccactttctgacggagttgtttt----cttcttgtaaatttacttaagttcctcgtaaattctggatattagccctttgtcggatggatagattgcaaaaattttcttccattctgtaggttgcctgttcactctggctagtcatatgcagaaaactgaaactagaccccttcctgacaccttatataaaaattaactcaagatggattaaagatttaaacgtaagacccaaaaccagaaaaatcctagaagaaaacctaggcaataccatccaggacataagcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggtagcaaaagccaaaattgacaaaagggatctaattaaactaaagagcttctgcacagcaTGACTGTATTTCAATGCATGTTTACCACCAAGCTCTTAATGCTCCACCACTGTCCTGTGTCATTAGGATCCCAGCCCTGCAGCCATTCCTCTAGTTGGGCCTGGGTTGGCTCTGGGATGCTGC-GGGG--GGCTGGTGGGTGGCAGAGGGGCCAGTGGG--GACCTGGGAC--GG-GTGGAGACCCCTCCCACTACACATCCCACTGCCTGGTCATCT-GGCCCCCCACCGGCTTGCCCGCTGCTCCCACCTCCCATGGTGGGT-------TGGGGGCTGGGGACTGGGGCAGGGTGCCCCAAATATCTCTCGGTGGCGATCGCTCAGTCCCTGCAGTCCATCCAGCTCCTGCATTGTCCATCCTACCAATAACCTCTCACTTGCTATTCTCAGCCCCTTCCTGCATTGTCTCCCTGTGAGACCTACTAGAA--CCCCCACCTTTCACACCACTGACCTgctggaggaaaatgcacagaggtacagacgaggccacgca i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 4468 955 - 192599291 tttgatttgcatttctctaatgaccagtgatgatgagctttttttc--atgtttgttggctgcataaatgtt-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtagg-tacctgttcactctggctagtcttatgcggaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaataccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCACCGAACTCTTAATGCTCCACCACTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCAC---GG--GGCCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAAG-GCAGAGACCCCTCCCGCTGCACATCCCACTGCTTGGGCACCT-GGCCCCCCGCAGGCCCGCCCGCTGCTCCCGCCTCCCGTGGAGGGT-------CGGGGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTCAGCCCCTTCCTGCCTTGTCTCCCTGTGAGACCTACTGGAA-CCCCCCACCTTTCACACCACTGACCAGCTGGAGGAAAA--CGCAGAGGCACAGACTAGGCCACGTG i rheMac3.chr2 M 585 I 8 s macFas5.chr2 13142 955 + 192460366 tgtgatttgcgtttctctaatgatcagtgatgatgagctttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtagg-tacctgttcactctggctagtcttatgcggaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgttagacctaaaaccagaaaaaccctagaagaaaacctaggcaataccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAGTGCATGTTTACCACCGAACTCTTAATGCTCCACCACTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG--GGCCGGTAGGCTGCGGAGGGGCCAGTGGG--GCCCTGGGGCCAAG-GCAGAGACCCCTCCCGCTGCACATCCCACTGCTTGGGCACCT-GGCCCCCTGCAGGCCCGCCCGCTGCTCCCGCCTCCCGTGGAGGGT-------CGGGGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTCAGCCCCTTCCTGCCTTGTCTCCCTGTGAGACCTACTGGAA-CCCCCCACCTTTCACACCACTGACCAGCTGGAGGAAAA--CGCAGAGGCACAGACTAGGCCACGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 11909 956 - 187378091 tgtgatttgcgtttctctaatgatcagtgatgatgagttttttttc--atgtttgttggctgcataaatgtc-----ttgagaagtgtctgttcatatgctttgcacACTTTCTGATGGgatggtttgttttcttcttgtaaatttacttaagttccttgtaaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtaggttacctgttcactctggcTAGTcttatgcagaaaactgaaactggaccccttcctgacacctcatacaaaaatt-----aagatggattacagacttaaacgtaagacctaaaaccagaaaaaccctagaagaaaacctaggcaataccactcaggacataggcatgggcaaagac-ttcatgactaaagcaccaaaagcaatggcaacaaaagccaaaactgacaaaagggatctaattacactaaagagcttctgcacagcatgaCTGTATTTCAGTGCATGTTTACCACCGAACTCTTAATGCTCCACCACTGCCCTGTGTCATTAGGATCCCAGCTCTGCAGCCATTCCTCTAGTTGGGCCTGGGTCGGCTCTGGGATGCCGC---GG--GGCCGGTAGGCTGCGGAGGGGCCGGTGGG--GCCCTGGGGCCAGG-GCAGAGACCCCTCCCGCTGCACATCCCACTGCTTGGGCACCT-GGCCCCCCGCAGGCCCGCCCGCTGCTCCCGCCTCCCGCGGAGGGT-------CGGGGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATAACCTCTCACTTGCTATTCTCAGCCCCTTCCTGCCTTGTCTCCCTGTGAGACCTACTGGAA-CCCCCCACCTTTCACACCACTGACCAGCTGAAGGAAAA--CGCAGAGGCACAGACTAGGCCACGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 362332 965 - 91754291 tttgatttgcgtttctctaatgatcagtgatgatgagcttctgttcatatgtttgttggctgcataaatgtg-----ttgagaagtgtctgttcatatgctttgcacactttctgatgggattgtttgttttcttcttgtaaatttacttaagctccttataaattctggatattagccctttgtcagatggatagattgtaaaaattttctcccattctgtaggttgcctgttcactctggctggtcttatgcagaaaactgaaactagaccccttcctgacaccttatacaaaaattaactcaagatggattaaaaacttaaacataagacctaaaaccagaaaaactctagaagaaaacctaggcaataccactcaggacataggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggtaacaaaagccaaaactcacaaaagggatctaattacactaaagagcttctgcacagcaTGACTGTATTTCAATGCATGTTTACCACCGAACTCTTAATTCTCCACCACTGCCCTGTGTCATTAGGATCCCAGCTCCGCAGCCATTCCTCTAGTTGGGCCTGGGTCAGCTCTGGGATGCCGC---GG--GGCCGGTGGGCTGCGGAGGGGCCGGTGGGCTGCGGAGGGGCCAGA-GCGGAGGCCCCTCCCACTCCACATCCCACTGCCTGGGCGTCT-GGCCCCCGGCAGGCCCGCCCGCTGCTCCCGCCTCCCGTGGAGGGT-------CGGGGGCTGGGGACTGGGGAAGGGTACCCCAAATATCTCTGGGTGGCGATCGCTCAGCCCCTCCAGTCCATCCAGCTCCTGCATTGTCCGTCCTACCAATACCCTCTCACTTGCTATTCTCAGCCCCTTCCTGCCTTGTCTCCCTGTGAGACCTGCTGGAA-CCCCCCACCTTTCACACCACTGACCAGCTGGAGGAAAA--CGCAGAGGCCCAGACTAGGCCACGTG i chlSab2.chr15 C 0 I 8 s calJac3.chr17 852336 930 - 74750902 tgtgatttgcatttctctaatgaccagtgatgatgagcttttcttcatatgtttgttggctgcataaatgtcttcttttgaaaggtgtctgttcatatcctttgcccactttctgatgggatcgtttgtttttttcttgtaaatttgtttaagttccttgtagattctggatattagacctttgtcagatggatagactgc--aagttttctatcattctgtaggttgcctgttcactctggctagtcatatgcagaaaactgaaactagatccctttcttacaccttatacaaaaattaactcaagatggattaaagatttaaacgtaagacctaaaaccacaaaaatcctagaagaaaagctaggcaataccattcaggacgtaggcatgggcaaagac-ttcatgactaaaacaccaaaagcaatggcatcaaaagccaaa-------------atctaattaaactcaagagct--------GCATGACTATATTTCAGTGCACATTTACCAGTG---CCTTAGAGCTCCACC-CCATCCTGTGTCAGTGGGATCCCAACTCTGCAGCCCTTCCTCTA-TTAGGCCTGG------TTTGGGATGCCAA---GGCCAGCTGGTGGGTGGCAGAGGCACCGGTGGG--GACCCAGGGCGGGGCGCGGAGAGCCTTCACGCT-CACATTCCACCGCCTGGGCGCCCAGGCTCCCCTCAGGCCCACCTGCTGCTCCCACCTCCTG-GGATGGC---------GGGGCTGGGG-TTGGGGCTGGGTACCCCAAATATCTCTCAGTGGTGATCACTCAGCCCCTCCAATCCATCCAGCTCCTGCATTGTCCATCCTACCAATAACTTCTCGCTTGCTATTCTCAGCCCCTTCCTGCACTGTCTCCCTGTCAGACCTTCTAGAAACCCACAAACTCTCACACCGCTGACCTGCTGGAGAAAAA--CGCA----CCAAGATTAGGTCAGGCT i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=10051.000000 s hg38.chr3_KI270935v1_alt 67611 49 + 197351 GGAGTCCTGATCTCTAACCCCAGCCGGTCTCAGGCCTTGCCGAGGCAAC s panTro4.chr3_GL389630_random 29453 49 + 103936 CGAGTCCTGATCTCTAACCGCAGCCGGTCTCAGGCCTTGCCGAGGCAAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199713741 49 + 202140232 cgagtcctgatctctaaccccagctggtctcaggccttgccgaggcaac i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 14097 8 + 192460366 ------------------CCTAACTG----------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 12865 8 - 187378091 ------------------CCTAACTG----------------------- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 853266 46 - 74750902 CAAGTCCT-ACATCTAACCCCAGCAGGTCTCAGGCCTTGGTGAGGCA-- i calJac3.chr17 C 0 C 0 e rheMac3.chr2 5423 8 - 192599291 I e chlSab2.chr15 363297 8 - 91754291 I e nomLeu3.chr11 120806746 10 + 123690457 I a score=1651523.000000 s hg38.chr3_KI270935v1_alt 67660 804 + 197351 GCTGCTTCCCCAGACACtctccctttcccattc----ttttttttttttttt-----------------------tttgagttggagtctcgctttgcca-cccagtctg-------gagtgcagcggcgcgatctcagctcactgcaccctccacctcctgggttcaa-------------------gcgattctcctgcctcagcctcccaagtagctgggattacaggcacacaccaccatgcctggctaatttttgtatttttagtagagatggggttacaccatgttggccaggctggtctcaaatgcccgacttcaggtgatccacccgcctcgagctcccaaagtgctgggattacaggcgtgagccatcgcgcctgcctttactttcccattcttaacgcctcccgtttcagacctgtccccttttcccc-gcatttctgactgtcacggcacatcacaaccagcagacagggcttcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgccaccaaacctcagcatgtacctggacccacatgtatcctcttttcctttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggagtcttggctctatcagttatgcctctattctgtatgtttaacctcgccctc------------gtaggggcataaaac--agcattt-aaacaggatcaag-ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcctggctaaacgtctcaaaaaagtggatacactttctgtcAACtcctaaacactcctcac s panTro4.chr3_GL389630_random 29502 802 + 103936 GCTGCTTCCCCAGacactctccctttcccattc------ttttttttttttt-----------------------tttgagatggagtctcgctttgcca-cccagtctg-------gagtgcagcggcgcgatctcagctcactgcagcctccacctcctgggttcaa-------------------gcgattctcctgcctcagcctcccaagtagctgggattacaggcacacaccaccacgcccggctaatttttgtatttttagtagagatggggtttcaccatgttggcctggctggtctcaaatgcccaacctcaggtgatccacccgcctcgggctcccaaagtgctgggattacaggcgtgagccatggtgcctgcccttactttcccattcttaacgcctcccgtttcagacctgtccccttttcccc-gcatttctgactgtcacggcacatcacaaccagcagacagggcttcccctatttcacaggagaaatagaagccatcagatgggacctccttcaaagtcctgcccccaaacctcagcatgtacctggacccacatgtatcctcttttcctttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggggtcttggctctatcagttatgcctctattctgtatgtttaacctcaccctc------------gtaggggcataaaac--agcattt-aaacaggatcaag-ctttccattttaaaactccatacactcccttaatttcatctcctcctccacctactgccccatgtctctccctcttcgtggctaaacgtctcaaaaaagtggatacactttctgtcaactcctaaacactcctcac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199713790 809 + 202140232 gctgctttcctagacactctcactttcccattctttttttttttttttttct-----------------------tttgagatggtgtctctctttgcca-cccaggctg-------gagtgcagtggcatgatctcagctcactgcaccctccacctcctggattcaa-------------------gcgattctcctgcctcagcctcccaagtagctgggattacaggtgcacaccaccatgcctggctaatttttgtatttttagtagagatgggatttcaccatgttggccaggctagtctcaaatgcccaacctcaggtgatccacccccctcaggctcccaaagtgctgggattacaggagtgagccattgcgcttgccctcactttcccattcttaacacctaccatttcagacctgtccgcttttcccctgcatttctaactgtcacaacacatcacaaccagcagacagggctgcccctatttcacaggagacatagaagccatcagatgggacctccttcaaagtcctgccaccaaacctcagcatggacctggacccacgtgtatcctcttttcctttgggattgaattagagaggtgccgctcgaaacccgctcctgggtgggcgtcttggctccatcagttatgcctctattctgtatgtttaacctcgccctc------------gtaggggcataaaac--agcgttt-aaacaggatcaat-ctttccattttaaaactccatacactcccttaatttcacctcctcctccacctactgccccatgtctcttcctcttcgtggctaaacttctcaaaaaagtggatgcactttcagtcaactcctaaacactcctcac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 5431 839 - 192599291 GCTGCTTCCCCAGACGCTCTcactttcccattcttttttttttttttttttttttttgggnnnnnnnnnnttttttttgagatggagtctcgctctgcca-cccaggctg-------gagtgcagtggtgagatctcagctcattgcaacctccaccagctgggttcaactaattctcctgcctcagcgcaattctcctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctaggttttgtatttttagtagagatggggtttcaccatgttagccaggctggtctcaaactcccaacctcaggtgatctgcctgcctcgggcttccgaagtgctgggattacaggcgtgagccaccgtgcccggcctcacttccccattcttaaggcctcccgtttcagacctgcccccttttcccc-gcattt----ctgtcacggcacatcacaaccagcagacagggcttccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttccttcgggattgaatt----aggtgccgcttgaaacccgctcctgggt-ggggtcttggctctatcagttatgcctctattctgtatgtttcacctcgccctt------------gtaggggcataaaac--agcgtttaaaacaggatcaag-cttcccattttaaaactcc-cacactcccttaatttcatctccctctccacctactgccgcctgtctcttcctcttcatggctgaacttctcaaaaaagtggatacactttctgtcaactcctaaacgctcctcac i rheMac3.chr2 I 8 C 0 s macFas5.chr2 14105 831 + 192460366 GCTGCTTCCCCAGATGCTCTCACTTTCCCATTCtttttttttttttttttttttttt--------tttttttttttttgagatggagtctcgctctgcca-cccaggctg-------gagtgcagtggtgagatctcagctcattgcaacctccaccagctgggttcaactaattctcctgcctcagcgcaattctcctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctaggttttgtatttttagtagagatggggtttcaccatgttagccaggctggtctcaaactcccaacctcaggtgatccgcctgcctcgggcttccgaagtgctgggattacaggcgtgagccactgtgcccggcctcacttccccattcttaaggcctcccgtttcagacctgcccccttttcccc-gcattt----ctgtcacggcacatcacaaccagcagacagggcttccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatgtccctggacccacgtgtttcctcttttccttcGGGATTGAATT----AGGTGCCGCTTGAAACCCGCTCCTGGGT-GGGGTCTTGGCTCTATCAGTTATGCCTCTATTCTGTATGTTTCACCTCGCCCTT------------GTAGGGGCATAAAAC--AGCGTTTAAAACAGGATCAAG-CTtcccattttaaaactcc-cacgctcccttaatttcatctccctctccacctactgccgcctgtctcttcctcttcatggctgaacttctcaaaaaagtggatacactttctgtcaactcctaaacgctcctcac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 12873 814 - 187378091 GCTGCTTCCCCAGACGCTCtcacttt-ccattctttttttttttttttttttttttt------------------tttgaggtagagacTCGCTCTgccaccccaggctg-------gagtgcagtggtgagatctcagctcattgcaacctccacctgctgggttcaactaattctcctgcctcagcgcgattctcctg----------ccaagtagctgggattacgcgcacacaccaccatgcccggctaggttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctcaaactcccaacctcaggtgatccacctgcctcgggcttccgaagtgctgggattacaggcgtgagccaccatgcccggcctcacttCCCCATTCTTAAGGCCTCCCGTTTCAGACCTGCCCCCTTTTCCCC-GCATTT----CTGTCACGGCACATCACAACCAGCAGACAGGGCTTCCC--GTTTCACAGGAGAAATAGAAGCCATCAGACGGGACCTCCTTCAAACTCCTGCCACCAAAGCTCAGCATGTCCTTGGACCCACgtgtttcctcttttccttcgGGATTGAATT----AGGTGCCGCTTGAAACCCGCTTCTGGGTGGGGGTCTAGGCTCTATCAGTTATGCCTCTATTCTGTATGTTTCACCTCGCCCTT------------GTAGGGGCATAAAACAGAGCGTTTAAAACAGGATCAAG-CTTCCCATTTTAAAACTCC-CACACTCCCTTAATTTCATCTCCCCCTCCACCTACTGCCgcctgtctcttcctcttcatgGCTGAACTTCTCAAAAAAGTGGATACACTTTCTGTCAACTCCTAAATGCTCCTCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 363305 817 - 91754291 GCTGCTTCCCCGGACACTCTCACTTTCCCAttcttttttttttttttttt-------------------------tttgagatggagtctcgctctgcca-cccaggctg-------gagtgcggtggtgcgatctcagctcactgcagcctccacctgctgggttcaactaattctcctgcctctgcgcgattctcctgcctcagcctcccaagtagctgggattacacgcacacaccaccatgcccggctagtttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaacgcccaacctcaggtgatccacccgcctcgggctcccaaagtgctgggattacaggcatgagcgaccgcgcccggcctcacttccccattcttaaggcctcccatttcagacctgcccccttttccct-gcattt----ctgttatggcacatcacaaccagcagacaggacttccc--gtttcacaggagaaatagaagccatcggacgggacctccttcaaactcctgccaccaaagctcagcatctccctggacccacgtgtttcctcttttcctCTGGGATTGAATT----AGGTGCCGCTTGAAACCCGCTTCTAGGTGGGGGTCTTGGCTCTGTCAGTTATGCCTCTATTCTGTATGTTTAACCTCGCCCTT------------GTAGGGGCATAAAACAGAGTGTTTAAAACAGGATCGAG-CTtcccattttaaaactccacacactcccttaacttcatctccccc-cgacctactgccgcctgcctcttcctcttcatgactgaacttctcaaaaaagtggatacactttctgtcaactcctaaacgctcctcac i chlSab2.chr15 I 8 C 0 s calJac3.chr17 853312 763 - 74750902 -------------------------------------------------------------------------------agacggagtgtcactctgttg-ctcaggttggagtgcagagtgcagtggcgcgatctcacctcactgcagcctctgcctcccgagttcaa-------------------gcgattttcctccctcagcccccagaatagctgggattacagacacccgccatcatgcctgactaatttttgtatttttc-tagagatgggatttcaccatgttggccaggctggtcttgaactcctgacctcaggtgatctacctgcctcggcctcccaaagcgctgggattacagatgcgagccaccccgctcgaccT--ctttcccattcttaacg------gtttcagacctgtccccttctctcc-acatccctgactgtcactgcacatcacaaccagcacagagggcctcccatgtttcacaggagaagtagaagctaccggatgggaccaccttcaaagtcctgccaccaaacctcagcg-gtacatggacccacatgtatcctttttttcct-gtgattGAATTAGAGTGATGCTGGTTGAAA-CCACTCCTGGGTGGGGGTCTTGGCTCTATCAGTTATGTCTCCATTCTGCATATTTAACCTCGCCCTCAAGGGAAAGGGAGCAGGGACATAAAACAGAGCATTTAAAACAGGATCAAGtttttccattttaaaactccatacgttcccttaatttcatctcctcctgcacctacggccccatgtctgttcctcttcatggctaaacttctcacaaaagcagatacactttctgtcaactcctaaacactcctcac i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 120806746 10 + 123690457 I a score=1956667.000000 s hg38.chr3_KI270935v1_alt 68464 694 + 197351 gctcatttggcctctgctcctcccttcctcctcccacttcattggaactacttctgccaaagaggatccctgagtcagcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttggggacgctgtactgttctggttttgcccctccctcCGAGCA------------------------------------TTCCTTGTGTT----Tgtcctggcccattttctcctctcattctacatcctctccccggggattttagcttctctcacggctcaggttaccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctgacagacttgcttggtcaatatactactggacatattcatgagactgtctcacacaggcatctcgaacccagtgtgtcccac--aattctcttcctatccatgcctgttcctcttccactgcctcatatgtcggtgactg--tccaccttctctctctctcccc-----------ctctccgtttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattatcccctaaatttgaacatttttcctctcgaaagtgtatggccattaccctattacagatcaacatcttcaatcactggaatgatggcaataatctaattgggttc s panTro4.chr3_GL389630_random 30304 722 + 103936 gctcacttggcctctgcttctaccttcctcctcccacttcattggaactacttctgccaaagaggatccctgagtcatcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctcttctggcaacattcttttccttggtttggggacgctgtactgttctggttttgcccctccctctgagca---ccccctcctgtgttcagccctt-tatgtcggggttccttgtgtt----tgtcctggcccattttctcctctcattctacatcctctccccggggattttagcttctctcacggctcaggttaccatctccatagtgatgactatcaaattctgtacctcatttccagaggctcctgacagacttgattggtcaatatattactggacatattcatgagactgtctcacacaggcatctcgaacccaatgtgtcccacataattctctt------catgcctgttcctcttccactgcctcatacgtcggtgactg--tccaccttctctctctctcccc-----------ctctccatttggctcataggaaaagtgtcaccaagggctgtaagtgcagatttctaattaccccctaaatttgaacatttttcccctcgaaagtgtatggccattaccctattacagatcaacatcttctatcactcgaatgatggcagtaatctaattgggttc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199714599 726 + 202140232 gctcactcgacctttgcccctgccttcctcctcccacttcattggaactgcttctgccaaagaggat--ctgagacatcctgactggtaaccccaatggactctactcaatatgcaacatccttcacttcttagcagagtttgaaacagcctgactctcctctcctggcaacattcttttccttggtttggggatgctgtactgttctggttctgcccctccctctgagca---ccccctcctctgttcagccctt-tatgtcggcattccttgtgtt----tgtcctggcccattttctcctctcattctacatcctctccccggggattttagcttctctcatgactcgggttaccagctccatagtgatgactaccaaattctgtacctcatttccggaggctcctgacagacttgcttgctcaatacattactggacatattcatgagactgactcacacaggcatctcgaacccaaggtgtcccacataattctcttcctgtccatgcctgttcctcttccactgcctcatatgtcggtgactg--tccaccttctctctctctcccc-----------ctctccatttggctcataggaaaagtgtcaccaagggctggaagtgcagatttctaattatcccctaaatttgaacatttttcccctctaaagggtatggccattaccctattacagatcaacatcttctatcactcaaatgatggcaataatctaattgggttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120806756 722 + 123690457 GCTCACTTGGCCTTTGCTCCTACCTTCCTCCTCCCACTTCATTGGAACTACTTCTGCCAAAGAGGATCCCTGAAACATCCTGACTGGTAACCCCAGTGGACTCTACTCGATATGCAACGTCCTTCACTTCTTAGCAGAGTTTGAAACAGCCTGactctcctcttctggcaacattcttttccttggtgcggggatgct-tactgttctggttttgcccctccctctgagca---ccccctcctctgttcagccctt-tatgtcggcattccttgtgtt----tgtcctggcccattttctc--ctcgttctacatcctctgcccggggattttagcttctctcatggctcggggtaccatctccacagtgatgactatcaaattctgtacctcatttccggaggctcctgacagacttgcttgctcaatatattactagacatattcatgagactg--tcacacaggcgtgtcgaacccaatgtgtcccacataattctcttcctgtccat-cctgttcctcttccactgcctcatacgtcggtgactg--tccaccttctctctctctcccc-----------ctctctgtttggctcataggaaaagtgtcaccacgggctgtaagtgcagatttctaattatcccctaaatttgaacatttttcccctctaaagtgtatggccattaccctattacagatcaacatcttctatcactcgaatgatggcaataatctaattgggttc i nomLeu3.chr11 I 10 C 0 s rheMac3.chr2 6270 720 - 192599291 actcccttggcctctgctcctaccttcgtcctcccacttcacgggaactacttgtgccaaagaggatccctgagacgtcctgactggtaaccccagtggactctactcaacacgccacgtccttcacttctt---agagtttgaaacagcctgaccctcctcttccggcgacaatcttttccttggtttgggga--ctgtacatctctggttctg-ccctccctctgagcg---ccccctcctctgttcagccctt-tatgtcggcattgcttgtgtc----tgtcctggcccattttctcctctcgttctacatc--ctccccggggactttagctcctctcatggctcgggtcaccagctccgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctgacggactcgcctggtcaatacgttattggacacattcatgagactgtctcacacaggcctctcaaacccagtgtgtcccaggtaattctcgtcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccaccttctctctctctccac-----------ctctacatttggctcataggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtttgaacatttttcccctctaaagtgtatgaccattaccctattacagatcaacatattctatcactcgaatgactgcaataatctaactgggttc i rheMac3.chr2 C 0 I 2564 s macFas5.chr2 14936 720 + 192460366 actcccttggcctctgctcctaccttcctcctcccacttcacgggaactacttgtgccaaagaggatccctgagacgtcctgactggtaaccccagtggactctactcaacacgccacgtccttcacttctt---agagtttgaaacagcctgaccctcctcttccggcgacaatcttttccttggtttgggga--ctgtacatctctggttctg-ccctccctctgagcg---ccccctcctctgttcagccctt-tatgtcggcattgcttgtgtc----tgtcctggcccattttctcctctcgttctacatc--ctccccggggactttagctcctctcatggctcgggtcaccagctccgcagtgatgacaaccaaattctgtacctcatttcccgaggctcctgacggactcgcctggtcaatacgttactggacacattcatgagactgtctcacacaggcctctcaaacccagtgtgtcccaggtaattctcttcctgtccgtgcctgttcctcttccactgcctcctacgtcagtggctg--tccgccttctctctctctccac-----------ctctacatttggctcataggaaaagtgtcaccaagggctgtgggtgcagatttctcattatcccctaagtttgaacatttttcccctctaaagtgtatgaccattaccctattacagatcaacatcttctatcactcgaatgactgcaataatctaactgggttc i macFas5.chr2 C 0 I 2558 s papAnu2.chr2 13687 723 - 187378091 GCTCCCTTGGCCTCTGCTCCTACCTTCCTCCTCCCACTTCACGGGAACCACTTCTGCCAAAGAGGATCCCTGAGACGTCCTGACTGGTAACCCCAATGGACTCTACTGAACACACCACGTCCTTCGCTTCTTAGCAGAGTTTGAAACAGCCTGACCCTCCTCTTCCGGTGACAATCTTTTCCTTGGTTTGGGGA--CTGTACATCTCTGGTTCTG-CCCTCCCTCTGAGCG---CCCCCTCCTCTGTTCAGCCCTT-TATGTCCGCATTGCTTGTGTC----TGTCCTGGCCCATTTTCTCCTCTCGTTCTACATC--CTCCCCGGGGACTTTAGCTCCTCTCATGGCTCAGGTCACCAGCTCCGCAGTGATGACAACCAAATTCTGTACCTCATTTCCCGAGGCTCCTGACGGACTCGCCTGGTCAATACGTTACTGGACATATTCATGAGACTGTCTCACGCAGGCCTCTCAAACCCAGTGTGTCCCAGGTAATTCTCTTCCTGTCTGTGCCTGTTCCTCTTCCACTGCCTCCTACGTCAGTGGCTG--Tccgccttctctctctctccct-----------ctctatatTTGGCTCATAGGAAAAGTGTCACCAAGGGCTGTGGGTGCAGATTTCTCATTATCCCCTAAGTGTGAACATTTTCCCCCTCTAAAGTGTATGGCCATTACCCTATTACAGATCAACATCTTCTATCACTCGAATGACGGCAATAATCTAACTGGGTTC i papAnu2.chr2 C 0 I 2538 s chlSab2.chr15 364122 723 - 91754291 gctccctgggcctctgctcccaccttcctcctcccacttcactggaacaacttctgccaaagtggatccctgagacgtcctgactggtaaccccaatggactctactcaacacgccacgtccttcacttcgtagcagagttggaaacagcctgaccctcctcttccggcgacattcttttccttggtttgggga--ctgtacatctctggttctg-ccctccctctgagcg---ccccctcctctgttcagccctt-tatgtcggcattgcttgtgtc----tgtcctggcccattttctcctctcattcttcatcctctccccggggactttagctcctctcatggctcgggtcaccagctccgcagtgatgactaccaaattctgtacctcatttcccgaggctcctgacagacttgcctggtcgatacgttactggacatattcacgagactgtctcacacaggcctgtcaaacccagtgtgtcccagataattctcttcctgtccgtgcctgttcctcgtccactgccccatACGTCAGTGGCTG--TCCGCCTTCTCTCTCTGCCC-------------CTCTACATTTGGCTCATAGGAAAAGTGTCACCAAGGGCTGTGGGTGCAGATTTATCATtatcccctaagtttgaacatttttcccctctaaagtgtatggccattaccctagtgcagatcaacatcttctatcactcgaatgacggcaataatctaactgggttc i chlSab2.chr15 C 0 I 2237 s calJac3.chr17 854075 730 - 74750902 gctcacttggcctctgcccctaccttcccactcccacttcactggaactgcttctgccaaaggggatcctggtagcatgaggactggtaaccccagcaggctctgctccatatgcaacttccttcacttcttagcagagtttggagcag-ctgactctcctcttcttgagacactcttttccttgattccgggacactgtacttttctggtttcgcccctccctctgagcttcccctcctcctctgtccagcccttaaatgttggcattccttgtgtctgtgtgtcctgggccatttcctcctctcagtctacatactctccccagggatgttagctcctcttaaggctccgcttaccagctccatagtgatcactgccaaatgctgtacttcatttcc-gatgctcctgtcagact----------------tactggacatattcatgaaactgtctcacacaggcatctcgaacccaatgtgtcccaaataattctcttcctgtccatgcctcttcctcttccactgcctcatatgtcggtgactgtatccaccttctctctctcccccctggcttttttttttttttttttgctcataagaaaagtatcaccaagtgctgtaagtgcagatttctaattatcccctaaatttaaacattttccccc-caaaaatgtatggtcattaccctattacagatcaacatcatccatcacttgaatgatggcaataatctaattgggttc i calJac3.chr17 C 0 C 0 a score=421754.000000 s hg38.chr3_KI270935v1_alt 69158 551 + 197351 attttatcctctatc-taacaatgacaactcattgcctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagac-gctcagatattccctgaggctccttggcctggccacaaaggccctacacattctggctgcttcctcctttccagcatcctctctcacgtctcctctcctcagttccaccctcaggaggcaccagaattcctcacttctttgactacaaggcaccgtcttactcccaagaccAGTGAATCCGAAGGTGGACCACCAgctgaggga-ctagattccagactgaatagaacaactttccctgtctctccacataaagtgtgtttgtttttcctcttacaggtttccttaatgacaacaaaaaagggagtaatcct-acccacT-GTAAGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGCTTTAGATGAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCACACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA s panTro4.chr3_GL389630_random 31026 551 + 103936 attttatcctctatc-taacaatgacaactcattgtctacacagcaggtagaagga-----------------gtttgttttcagaattgccctctgacctatttaagac-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcttcctcctttccagcttcctctctcacgtctcctctcctcaattccaccctcaggaggtactagaattcctcacttctttgactacaaggcaccgtcttactcccaagaccAGTGAATCCGAAGGTGGACCACCAgctgaggga-ctagattccagactgaatagaacaactttccctgtctctccacataaagtgtgtttgtttttcctcttacaggtttccttaacgacaacaaaaaagggagtaatcct-acctacT-GTAAGAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCATGACAGCCTGGTTTAGATAAAGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATGTCGCACGTAATTGAAGGAAGAACAAGAAAACTATAGTAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199715325 552 + 202140232 attttatcccctatcttaccagtgacaactcattgtctacacagcaggtagaagga-----------------atttgttttcagaattgccatctgacctatttaagac-gctcagatattccctgagggtccttggcatggccataaaggccctacgcattctggctgcatcctcctttccagcatcctctctcatgtctcctctcctcaattccaccctcaggaggtactagaagtcctcacttctttgactacaaggcactgtcttactcccaagaccAGTGAATCCGAAGGTGGCCCGCCAGCTGAGGGA-CTAGATTCCAGACTGAATAGAACAACTTTTCCTGTCTTTCCACATGAAGTGCGGTTGTTTTTCTTCTTACAGATTTCCTTAATGACAACAAAAAAGGGAGTAATCCT-ACCTACT-GTAAAAGTCATGACTCTTGAT--TGCAGCTGACAGAAACTCACGACAGCCTGGTTTAGATAAAGGGGGAGAGAAGGAATGGAAGAATCTTGGCGTTGGGAATGTCGCACGTAATTGAAGGAAGAACAAGAAAACTTTAGGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120807478 550 + 123690457 gttttatcccctatcttaccaaagacaactcattgtctacacagcaggtagaagga-----------------atttgttttcagaattgccatctgacctatttaagat-gctcagatattccctgaggctccttggcatggccacaaaggccctacacattctggctgcatcctcctttccagcatcctctctcacgtctcctctcctcagttccaccctcaggagctactaaaattcctcacttctttgactacgaggcac--tcttactcccaagaccAGTGAATCCGAAGGTGgcccgccagctgaggga-ctagattccagattgaatagaacaactttccctgtctctccacatgaagtgcgtttgtttttcctcttacagatttccttaacgacaacaaaaaagggagtaatcct-acctact-gtcaGagtcatgactcttgat--tgcagctgacagaaacccatgacagcctggtttagataaaGGGGGAGAGAAGGACTGGAAGAATCTTGGAGTTGGGAATATCACACATAATTGAAGGAAGAACAAGAAAACTGTAGGAAA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 854805 573 - 74750902 attatgtcccctatcttgccaattacaactcattctctacaccctggatagaaggattttttttttttttttttttttttttcagaattgccgtttgatctatttaagactgctcagatattccctgatgctccttggcatggccaaaaaggccctacacattctggccccatcttcctttccactgtcctccctcacttctcttctcctcaattcttccctcaggagatactagaatttcttaccttcttgattaccaggcactgtcttacttccaagaccACTGAATCCGAGGGT-GCCTTCTAGCTCAGGGACCTAGATTTTAGACTCAATATAACAACTTTTCCTGTCTCTCCACATGAGGTGCATTTGTTTTTCCTCTTAAAGGTTTCCTTAAAAACAACAAAAAAGGTAGTAAAATTAACCTGCTGGTAAGAGTCGTGACTCTTTTTGATGCAGCTGACGGAAACTCATGACAATCTGGTTTAGATAAAGGGGGAGAGGA-TATTGGAAGAATCTTTGCGTTGGGAATATTGCACATAATTGAAGGACGAACAAGAAAACTATAGGAAA i calJac3.chr17 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=8937.000000 s hg38.chr3_KI270935v1_alt 69709 16 + 197351 GAACCCTGGGGTGGTG s panTro4.chr3_GL389630_random 31577 16 + 103936 GAACCCTGGGGTGGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199715877 16 + 202140232 GAACCCTGAGGTGGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120808028 16 + 123690457 GAACCCTGGGGTGGTG i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855378 0 - 74750902 C e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=6748.000000 s hg38.chr3_KI270935v1_alt 69725 25 + 197351 ATGTAGTCATGGGCCAAGTGTCCTG s panTro4.chr3_GL389630_random 31593 25 + 103936 ATGTAGTCATGGGCCAAGTGTCCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199715893 25 + 202140232 ATGTATTCATGGGCCAAGTGTCCTG i ponAbe2.chr3 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855378 0 - 74750902 C e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=10686.000000 s hg38.chr3_KI270935v1_alt 69750 21 + 197351 GAACCCTGGGGTGGTGATGTA s panTro4.chr3_GL389630_random 31618 21 + 103936 GAACCCTGGGGTGGTGATGTA i panTro4.chr3_GL389630_random C 0 T 62 s ponAbe2.chr3 199715918 21 + 202140232 GAACCCTGGGGTGGTGTTGTA i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 855378 21 - 74750902 GAACCCTGGGGTGGTAATATA i calJac3.chr17 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=5243.000000 s hg38.chr3_KI270935v1_alt 69771 20 + 197351 GTTGTGGGCCAAGTGTCCTG s ponAbe2.chr3 199715939 20 + 202140232 GTCGTGGGCCAAGTGTCCTG i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 855399 20 - 74750902 GTAGTGGGCCAAGTGTCCTG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e nomLeu3.chr11 120808044 0 + 123690457 C e panTro4.chr3_GL389630_random 31639 62 + 103936 T a score=300.000000 s hg38.chr3_KI270935v1_alt 69791 1 + 197351 G s panTro4.chr3_GL389630_random 31577 1 + 103936 G i panTro4.chr3_GL389630_random T 62 C 0 s calJac3.chr17 855419 1 - 74750902 G i calJac3.chr17 C 0 T 42 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199715959 0 + 202140232 C e nomLeu3.chr11 120808044 0 + 123690457 C a score=3847.000000 s hg38.chr3_KI270935v1_alt 69792 40 + 197351 AACCCTGGGGTGGTGATGTAGTCATGGGCCAAGTGTCCTG s panTro4.chr3_GL389630_random 31578 40 + 103936 AACCCTGGGGTGGTGATGTAGTCATGGGCCAAGTGTCCTG i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855420 42 - 74750902 T e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199715959 0 + 202140232 C e nomLeu3.chr11 120808044 0 + 123690457 C a score=16346.000000 s hg38.chr3_KI270935v1_alt 69832 33 + 197351 GAACCCTGGGGTGGTGATGTAGTTGTGGGCCAA s panTro4.chr3_GL389630_random 31618 33 + 103936 GAACCCTGGGGTGGTGATGTAGTTGTGGGCCAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199715959 33 + 202140232 GAACCCTGGGGTGGTGAAGTAATCGTGGGCCAA i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 855378 33 - 74750902 GAACCCTGGGGTGGTAATATAGTAGTGGGCCAA i calJac3.chr17 T 42 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e nomLeu3.chr11 120808044 0 + 123690457 C a score=74032.000000 s hg38.chr3_KI270935v1_alt 69865 110 + 197351 GTGTCCTGGGTTTTGGGTGGAGAAAGAGTCCCCTAGATAAGTTAttaggtgggtgcaaaggtaattgcagtttttcccat-tattttaattgcgaaaacagcaattacctt s panTro4.chr3_GL389630_random 31651 110 + 103936 GTGTCCTGGGTTTTGGGTGGAGAAAGAGTCCCCTAGATAAGTTAttaggtggatgcaaaggtaatcgcagtttttcccat-tattttaattgcaaaaacagcaattatctt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199715992 110 + 202140232 GTGTCCTGGGCTTTGGGAGCAGAAAGGCTCCCATAGATAAGTTATTAGGCGGGTGCTAAGGTAATCGGGGTCTTACCCAT-TATGTTAAGTGCGAAAACACCTATTACCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120808044 110 + 123690457 GTGTCCTAGGCTTTGGGTGGAGAAAGAGTCCCCTAGATAAGTTAttaggtgggtgcaaaggtaatcgcagtttttcccat-tattttaattgcagaaacagcaattacctt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855411 107 - 74750902 GTGTCCTGGGCTTTGTG----GAGAGAGTCCTCTAGGTAAATTAttaggttggcataagggtaattgcaatttttgccataaattttaattgcaaaaacagaaactacctt i calJac3.chr17 C 0 I 312 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=910.000000 s hg38.chr3_KI270935v1_alt 69975 1 + 197351 t s panTro4.chr3_GL389630_random 31761 1 + 103936 t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199716102 1 + 202140232 T i ponAbe2.chr3 C 0 I 2095 s nomLeu3.chr11 120808154 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855830 1 - 74750902 t i calJac3.chr17 I 312 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=36440.000000 s hg38.chr3_KI270935v1_alt 69976 93 + 197351 gcaccaacctgaTGGAGTCCCCCTTGCC-ATGCTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC s panTro4.chr3_GL389630_random 31762 93 + 103936 gcaccaacctgaTGGAGTCCCCCCTGCC-ATGTTTCT-CTCTGTGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120808155 91 + 123690457 gcaccaacctgaTGGAATCCCCCCTCCT-GTGCTTCT-CTC--TGAAAAACCCCAAGCCGAAGTCAGC---ATAACATCCACAGGACTCTATGTTTGC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 855831 96 - 74750902 gtaccaacctaaCAGAATCACCCCTGCCTGTGCATCTACTCTGTGAAAAACCCAAAGATAAAGTCAGCATGATAACCTCCACAGCACTC--TGTTTGC i calJac3.chr17 C 0 I 3886 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199716103 2095 + 202140232 I a score=100415.000000 s hg38.chr3_KI270935v1_alt 70069 378 + 197351 AAAAGCCAGcttagctatattacatgtataagcacattttttcaataagtcagccttagcttactgtaactttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagagagaaggagtacactctaaaacactgatcaatagtatattatagtaaatacataaa s panTro4.chr3_GL389630_random 31855 378 + 103936 AAAAGCCAACTTAGCTATATTACATGTATAAGCACATTTTTTCAATAAGTCAGCCTTAGCTTACTGTAACtttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaaacacatgttagcctagatccacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggggcaataacacacatggagctgtcatcgcctgtggtaacaatgccttctacagtacttcccaaagggcctgctagttcacttaattcttttatagttagaaggagtacactctaaaacactgatcaatagtacagtatagtaaatacataaa i panTro4.chr3_GL389630_random C 0 I 723 s nomLeu3.chr11 120808246 376 + 123690457 AAAAGCAGACTTAGCTGTATTACATGTATAAGCACAttttttcaataagtcaaccttagcttactgtaactttttaactttataaacttagtattttaactttttaaacttttttgttgaaaactaagacacaaaagcac--gttagcctagatctacacagggtcagggtcatcagtatcactgtcttccacctccacattttgtctctctggaaggtcttcaggagcagtaacacacatggagctgtcatcgcctgtggtaacagtgccttctacagtacttcccaaagggcctgttagttcacttaattcttttatagatagaaggagtacactctaaaacactggtcaatagtacagtatagtaaatacttaaa i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855927 3886 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199716103 2095 + 202140232 I a score=1723.000000 s hg38.chr3_KI270935v1_alt 70447 20 + 197351 ccaggaacacatttattatc s panTro4.chr3_GL389630_random 32956 20 + 103936 ccaggaacacatttattatc i panTro4.chr3_GL389630_random I 723 C 0 s nomLeu3.chr11 120808622 9 + 123690457 ccagtaaca----------- i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855927 3886 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199716103 2095 + 202140232 I a score=577874.000000 s hg38.chr3_KI270935v1_alt 70467 1199 + 197351 attatcacgtattgtgtattgtacagaatggtgtgtgctgtgctatccaggaacacatttattatcattatcaagtattgtgtactgtacagaatggtgtgcgctgtgcttttatgcaagtggcagcacagtagctttacacgagcatcactagacacatgagtagcattgcactcggcaacaggaattttttcaggcccattattataatcttatgggaccgcatcctatatgcagtttgtcattgaccaaaatgtccttatgcgatgcatgactATATTTG----------------CAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggagaagatatacagattgcaaataagcacatgaaaagatgtttgataccattagggaaacgcttctttaaaccaggagatatcaccacgtgttagaatcaacaaaataaggccaggcatggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggaattcaagaccaacctggccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgcgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaaaaaaaaa-agaatcaccaaaataaaaaatagtaacaatactattgtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtgcagccactctgggaaacagcttggc------tgttttttttt---atgactgaatgtgcaactactatatgatgcagtaatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataaaagTCAATTggccaggtgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcaggagtttgagaccagcctggccaacgtggtgaaaactcgtctctactaaaaatacagcaattagctgggtgtaatagtagccac s panTro4.chr3_GL389630_random 32976 1189 + 103936 attatcaagtattgtgtgctgtacagaatggtgtgcgctgtgctATccagtaacacatttattatcattatcaagtattgtgtactgtacagaatggtgtgcgctgtgcttttatgcaagtggcagcacagtagctttacacgagcatcactagacatatgagtagcattgcactcggcaacaggaattttt-caggcccattattataatcttatgggaccccatcctatatgcagtttgtcattgaccaaaatgtccttatgcaatgcatgactATATTTG----------------CAAAGGActagtatctagaatacatttaaaagtcttaaaatagtaacaaaacaaagaatgcaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagatatatagattgcaaataagcacatgaaaagatgtttgataccattagggaaacgcttctttaaaccaggaaatatcaccacgtgttagaatcaacaaaataaggccaggcacggtggctcacacctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccaacctggccaacatggcaaaaccctgtctctgctgaaaacacaaaaattagccaggtgtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaagataattgcttaaacccaggagacggaggttgcagtaagctgagatcatgccactgtgctccagcctgggcgacagagcaagattatgtctcaaaaaaaaaaaa---------gaatcaccacaataaaaaatagtaacaatactattgtcaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtgcagccactctgggaaacagcttggc------tgtttttttt----atgactgaacgtgcaactactatatgatgcagtaatttcatttttgcacatttatcccggagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataAAAGTCAATTggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcagtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaactcgtctctactaaaaatacagcaattagctgggtgtaatagtagccac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199718198 1220 + 202140232 attatcaagtattgtgtactgtacagaatggtgtgtgctctgctttccagtaacacatttattatcattttcaagtattgtgtactgtacagaatggtatgtgctgtgcttttatgcaagcggcagcacagtagctttacacgagcatcactagacacatgagtagcattgcactcggcaacaggaattttt-caggcccattattataatcttaggggaccctatcctatatgcagtttgtcattgacccaaatgtccttgtggaacacatgactgtatttgcaaaccacacatccaacaaaggactagtatctagtatacatttaaaagtctt-aaacagtaacaaaacaaagaatgcaattagaacatgagcaaaagatataaagcaacatttcactggaaaagatatacagattgcaaataagcacatgaaaagatgtttgataccgttagggaaacacccctttaaaccaggagatcccaccatgtgttagaatcaacaaaataaggccaggcacagtggctcacgcttgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctgctgaa---acaaaaattagccaggagtggtggcacacgcctgtagtcctagcaccttgggaggctgaggcaggataattgcttaaacccaggagatggaggttgcagtgagccgagattgtgccactgcactccagcctgggcgagagagcaagattatgtctcaaaaaaaaaaaaaaaaaaagagaatcaccaaaataaaaaatagtaacaatactattggtaaggatgcaaaggaactgtaccactcaatcactgctgtgagaatttaaagtggtgtagccactctgggaaacagtttggcagtttttgtttttttttttaatcactgaacatgcaactactatatgatgcagtaatttcatttttgtgcatttgtcccagagaaatgaaaacatatattcacacaaaacctgtatatgaatgctaataAAAGTCAATTggccaggcatggtggctcatgcctgtaatcccagcattttgggaggctgaggcagtggatcacctgaggtcaggagtttgagaccagcctggtcaacacggtgaaaacccatctctactaaaaatatagcaattagctgggtgtagtagtaggtgc i ponAbe2.chr3 I 2095 C 0 s nomLeu3.chr11 120808631 1134 + 123690457 ----------------------------------------------------------------ttattatcaagtattatgtgctgtacagaatggtgtgtgctgtgcttttatgcaagtggcagcacagtagctttacatgagcatcactagacacatgagtagcattgcactcggcaacaggaattttt-caggccccttactataatcttatgggaccccatcctatatacagtgtgtcattgacccaaatgtccttatgcaacgcatgac--tatttgcaaaccacacatccagcaaaggactagtatctagaatacatttaaaagtctt-aaacagtaacaaaacaaagaatccaattagaacatgagcaaaagatacaaagcaacatttcactggaaaagttacacagattgcaaataagcacatgaaaagatgtttgataccattagggaaatgcccctttaaaccaggagatcccaccatgtgttagaatcaacaaaataaggccgggcacggtggctcatgtctgtaatcccaacactttgggaggctggggcaggcagatcacatgagatcaggagttcaagaccagcctggccaacatggcaaaaccctatctctgctaaaaacacaaaaattagccaggcgtggtggcacatgcctgtagtcctagcaccttgagaggctgaggcaggagaattgcttaaacccaggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacagagcaagattatttctcaaaaaag--------------gaatcaccaaaataaaaaatagtaacaatactgttggcaaggatgcaaaggaactgtaccattcagtcactgctgtgagaatttacagtggtgcagccactctgggaaacagtttggc------agtttttttta---atgactgaagatgcaactactatatgatgcagtaatttcatttttgcacgtttatcccaaggaaatgaaaacatatattcccacaaaacctgtatatgaatgctaataaaagttAATTggccaggtgtggtggctcatgcctgtaatcccagcactttgagaggctgaggctgtggatcacttgaggtcaggagtctgggaccagcctggtcaacacggtgaaaacccatctctactaaaaatacagcaattagctgggtgtagtagtaggtgc i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 855927 3886 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=113959.000000 s hg38.chr3_KI270935v1_alt 71666 150 + 197351 ctgtaatcccagctactggggaggctgaagcagaagaacctcttgaacccgggaggcagaggttgcagtgagctgagatcgtaccactgcactccagcctgggcgatagagtgagactctgtctcaaaaaataaaataaa--ataaataaaa s panTro4.chr3_GL389630_random 34165 150 + 103936 ctgtaatcccagccactggggaggctgaagcagaagaacctcttgaacccaggaggcagaggttgcagtgagctgagatcataccactgcactccagcctgggcgatagagtgagactctgtctcaaaaaataaaataaa--ataaataaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199719418 141 + 202140232 ccataatcccagctactggggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagattgtaccactgcactccagcctggg----agagtgagactctgtctcaa-----aaaataaa--ataaataaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120809765 152 + 123690457 ctgtaatcccagctactggtgaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcataccactgcactccagcctgggcgatagagtgagactctgtctcaaaaaataaaataaaatataaataaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859813 138 - 74750902 ctgtaatcccagctactggggaggctgaggcaggacaatcccttgaacccagaaggcagaggttgcagtgagctgagatcataccactgcattccagcctgggtgacagagcaagactctgtctcaaaaa--aaaaaaaa------------ i calJac3.chr17 I 3886 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=32811.000000 s hg38.chr3_KI270935v1_alt 71816 39 + 197351 aGATTAGATAATCTGCAAAGTTCCTGTGAGCGCTGTCAT s panTro4.chr3_GL389630_random 34315 39 + 103936 agattagataatctgcaaagttcctgtgagcgctgtcat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199719559 39 + 202140232 agattagataatctgcaaagttcctgcgagctctgtcac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120809917 39 + 123690457 agattagataatctgcaaagttcctgcaagctctgtcat i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859951 33 - 74750902 -----aGATAATCTCCAAAGTTCCT-TGAGCTACGTGGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29029975 39 + 31377067 agattggatgatcaccaaaatccctgacagcagtatcat i canFam3.chr33 N 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=775333.000000 s hg38.chr3_KI270935v1_alt 71855 750 + 197351 -------TTTGTCACTCTGGTTTTTCAGATTCTTCCCCTGGAGGCTGGAGTTTCCAGGATGTCAAA----------------------------ATTACCTCTGCTTGGGTGAGCTATTTCAAGCAGCTGGGATACCTGTGTCACT----------------CC-------TGCTGTCTGCCAGTGACTGCCCAGGTGTCTG--CTGGTTCCTCCCCAGGAGTAGGGAGGAACCAGGTGGGCTGGCTGGGATGGGTGGATATTTAAAGACCAGGCCTTGGACGCTGCAGCACTTCTATCTCTGCTTGATGCCTGCTGCCACGTGGCTGGTCCTCCTCCTCCTGCTGTGGCTGAGCCTTGGGGT---------GAAGACAGGTGAGGAG--CTAGGCTGGCATCTGTGCTACAGGTCAAAGAGACCCCAATCTCTGCTCTC---TCATTCATTCAATCAATTAATCTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCCAGCattcattaattcat-taatcaaataattcatGTATTCAGACACTTATTAAGTACCGACTATATGGTTGATGTGGCTTCTTTGTGTATCCAG----TTTTATATCTGGATAAGATGTCTTTGGATGATCAGCTTGGGAGGGTCT----------------------AGTATCCAGAGGAT-GCTCCCTCGGATAGA-GGCAGCGTGGGCACTGTGGGTGG----CTGGGGTGGACGGGACAGGAGGGAAGGTAGGTGTGATAAACCCAGATCCAGATTAACAGGCAGACTCACT-GGGCAATTTCCAGGCACCAGTCTACTGGGTTTATT-CAAACATCCCTGGAAATACAACAGG s panTro4.chr3_GL389630_random 34354 746 + 103936 -------tttgtcactctGGTTTTTCAGATTCTTCCCCTGGAGGCTGGAGTTTCCAGGATGTCAAA----------------------------ATTACCTCTGCTTGGGTGAGCTATTTCAAGCAGCTGGGATACCTGTGTCACT----------------CC-------TGCTGTCTGCCAGTGACTGCCCAGGTGTCTG--CTGGTTCCTCCCCAGGAGTAGGGAGGAACCAGGTGGGCTGGCTGGGATGGGTGGATATTTAAAGACCAGGCCTTGGACGCCGCAGCACTTCTATCTCTGCTTGATGCCTGCTGCCACGTGGCTGGTCCTCCTCCTCTTGCTGTGGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--CTAGGCTGGCATCTGTGCTACAGGTCAAAGAGACCCCAGTCTCTGCTCTC---TCATTCATTCAATCAAT----CTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCCAGCATTCATTAATTCAT-TAATCAAATAATTCGTGTATTCAGACACTTATTAAGTACCGACTATATGGTTGATGTGGCTTCTTTGTGTATCCAG----TTTTATATCTGGATAAGATGTCTTTGGATGATTAGCTTGGGAGGGTCT----------------------AGTATCCAGAGGAT-GCTCCCTCGGATAGA-GGCAGCGTGGGCACTGTGGGTAG----CTGGGGTGGACGGGACAGGAGGGAAGGTAGGTGTGATAAACCcagatccagattaacaggcatactcact-gggcaatttccaggcaccagtctactgggtttatt-caaacatccctggaaatacaacagg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199719598 751 + 202140232 -------tttgtcactctGGTTTTTCAGATTCTTCCCGTGGAGACTGGAGTTTCCAGGATGTGAAA----------------------------ATTACCTCTGCTTGGGTGAGCTATTCCAAGCAGCTGGGATACCTGTGTCACT----------------CC-------TGCTGTCTGCCAGTGACTGCCCAGGTGTCCG--CTGGTTCCTCCCCAGGAGTAGGGAGGAACCAGGTGGGCTGGCTGGGATGGGTGGATATTTAAAGACCAGGCCTTGGACGCTGCAGCACTTGTATCTCTGCTTGAGGCCTGCTGCCATGTGGCTGGTCCTCCTCCTCCTGCCGTGACTGAGCCCCGGGAT---------GAAGACAGGTGAGGAG--CTAGGCTGGCATCTGTGCTGCAGGTCAGAGAGACCCCGGTCTCTGCTCTC---TCATTCGTTCAATCAATTAATCTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCTAGCATTCATTAATTCAT-TAATCAAATAATTCATATATTCAGATGCTTATTAAGTACTGACTATATGCTTGATGTGGCTTCTTTGTGTATCCAG----TTTTATTTCTGGATAAGATGTCTTTGGATGATTAGCTTGGGAGGGTCT----------------------AGTATCCAGAGGATGGCTCCCTTGGATAGA-GGCAGCGTGGGCACTGTGGGTGG----CTGGGGTGGATGGGACAGGAGGGAAGGTAGGTGTGATAAACCCAGATCCAGA-TAATAGGCAGACTCACTGGGGCAATTTCCAGGCACCAGTCTACTGGGTTTATT-AAAACATCCCTGGAAATACAACAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120809956 763 + 123690457 -------tttgtcactctGGTTTTTCAGATTCTTCCCCTGGAGACTGGAGTTTCCAGGATGTGAAA----------------------------ATAACCTCTGCTTGGGTGAGCTATTCCAAGCAGCTGGGATACCTGTGTCACT----------------CC-------TGCTGTCTGCCAGTGACTGCCCAGGTGTCCG--CTGGTTCCTCCCCAGGAGCAGGGAGGAACCAGGTGGGCTGGCTGGGATAGGTGGATATTTAAAGACCAGGCCTTGAACACTGCAGCACTTCTATCTCTGCTTGATGCCTGCTGCCATGTGGCTG---TTCCTCCTCCTGCTGTGGCTGAGCCCCGGGGT---------GAAGACAGGTGAGGAG--CTAGGCTGGCATCTGTGCTACAGGTCAAAGAGACCCCAATCTCTGCTCTC---TCATTCATTCAATCAAT----CTGTTTTGTCTCTGGCATGAC---CCACCTCCTGTGACCTAGCattcattaattcat-taatcaaataatttatGTATTCAGACACTTATTAAGTACCAACTATATGCCTGATGTGGCTTCTTTGTGTATCCAG----TTTTATATATGGATAAGATGTCTTTGGGTGATTAGCTTGGGAGGGTCTGTTTTGGTTGGGGAGTT-ATGGAGTATCCAGAGGAA-GCTCCCTCGGATAGA-GGCAGTGTGGGCACTGCGGGTGG----CTGGGATGGATGGGACAGGA-GGAAGGTAGGCATGATAAACCCAGATCCAGATTAATAGGCAGACTCATT-GGGCAATTTCCAGGCACCAGTCTATTGGGTTTATT-AAAACATCCCTGGAAATACAACAGG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 859984 735 - 74750902 -------TCTGTCACTCTGATTTTTCAGATTCTTCCCCGGGAGACTGGAGTTTCCAGGACGTGAAA----------------------------ATTATCCCTGCTTAAGTGAGCTATTCCAAGCAGCTGGGATACCTGCGTCACT----------------CC-------TGCTGT----CAGCGACTGCCCAGGTGTTAG--CTGGTTCCTCCC---AGCTGGGGAGGAACCAGATGGGTTGGCTGGGATGGGCAGATATTTAAAGACTGGGCCTTGGAC-CCAAAACACTGCTCTCTCCGCTCG-TGCCTGCTGCCATGTGGCTGCTGCTTCTCCTCCTGCTGTGGCTGAGCCCTGGGGT---------GAAGACAGGTGAGGAG--CTAGGCTG--ATCTGTGCTAGAGGTCAAGGAGACCTCCACCTCTGGTCTC---TCAGTCATTCAATCAATTAATCTCTTTTGTCTGTGACACGAC---CCACCTCCTGTGGTCTAGCATTCATTA-------------------------ATTCAGACCCTTATTAAGTACTGACTATATGCTTGATGTGGCTTCTCTGTGTATCCAG----CTTCATATCTG--TAAGATGTCTTTGGGTCATTAGCTTGGAAGGGCCTGTTTTGGTTGGGGAGGC-ATGGAGCATCCAGAGGAA-GCTCCCTCAGATGGAGGGCAACATGGGCACCGTGGGCAG----CTGGGGTGGGCGGGACAGGAGGTAAGGTAGGTGTGAAGAACCCAGATCCAGATTAGTAGGCAGATTCACT-GGGCAGTAGCCAGGCACCAGTCCACCGGGTTTATT-AAAACATCCCTGGAAATACAACGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65397077 743 - 98207768 -------tctgccactttggcatttcagattctTCCC--AGAGCGTGGGTATAAAAAGATATAAAA----------------------------ATTACCTCTGTTTGGCTAAGTCAATCCCAGCAGCTGAAACACCTGTGCCACA----------------CAGCCACGGTGCCACCCCCTTGCCAATCACCAGGTGTCAC--CTGGCTCCTCCTCTG---TGTGGAGACACTGGACAAGTGCTCTCCAGTGAGTAGCTATTGGA--GCTGGACCTTGATCCCTGAAGCACTTCTGCATCTATTGA--GCCTGAAGCCATGTGGTTTGCCTTTCTCCTCCTGCTGTGGCTGGGCCCTGTGATTCCAAACCAGAAGGCAGGTGAGGAGAACTGAGCTGACCCCTATTTGAGAGGTCAAAGAGACCCT-GTGTTTGTTCTCATTTCATTTAGTCAATCAAT----ATTATTTATTTCTGGTCAGATACGCCACCTTCTGATGGCTAGAACCCACTCACTGATCTGATCAGGTAACCCACTTACTCAGACATCACTTGTATCCTAA--ATGTGCTTGGTGTGGCTTCTGGGTGTGTCCAC----AC-------------AGCTGTCTCTGCAGCA--AGCTTGGA---GCCT-----GCTTGGGAAGGCTGTGGAGTCTTCAGAGGTG-GTTCT-----------GG---TGTGTACACTTTTGGAGG------AGGCATGAGGGATTAGGAGGGATGGTGAGCGTAAAAAGCCCAGGTCCAGATGAACA-GCAGCCTGGTC-CATCAGCCGCCACCCACTAGTTGATCAGGATGGCTAAAAATATACCTGGAAGTACAGCAGG i mm10.chr16 N 0 I 1273 s canFam3.chr33 29030014 777 + 31377067 tctggtttctctgattcTAGCTTCTCTGCTCCTCCCACAG--GTCTGGAAGCCCCAGGAGATGGGGaaaatatatatatatatttttttCCTCTATTACCTCTGCTTGGACAGGCTATTCCAAGCAGCCGGGACACCTGTGCCACTGTCTTGGTGCCACACCCC-------TGCCTTCTGCCAGTGGCTGCCCAGGTGTTGAGCTTCGCACCTCCCCAGGGAT--GCAGATACCAAACGAGCTTCCTGGGATGGGTGAGTATT-AAAGACTTGGCCTTGGTCCTTGAAACACT-CTGTCTCTGCTCAGTGCCTGCAACCATGTGTCTGG---TTCTCCTCCTGCTGTGGTTGAGCCCCGTGGCCCCAAACCAGGAGACAGGTGAGGAG--C-----------CTGTCTAGCAGGTCAAAGAGACCTCTAGTCCCTttcat---tcatttattcattcagt----cattTGTGTTCCTGGCATGAT---TTGCCTCCTAGGGGCTAATGTTCACTAATTCAT-TAATCCAATAATTCATTTCCTCGGAACCTTCCTGTGC------------TTTAATGTGGCTTCTCTGTGAATCCAACCACCTTCATATTCC--TAAGATGTCCTTGGCTGATTAGCTTGGGAAGGTTG----------GGGAGTCAGTGGAGTGTCCCAAAGAG-ATTCCTGCCAGTAGA-GGCAGCA-GGGAGTTCTAGAATGTGCACTGAGGCGGG-GAGGCAGGAGGGAAGGT-GCTGTGACAAGTCTAGACCCAGA------------CTCAAG-GGGTGACTGCCAGGCAC-AACCCATTTGTTTTgct-ataatat-ccgggaaatgtgatggg i canFam3.chr33 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=31663.000000 s hg38.chr3_KI270935v1_alt 72605 32 + 197351 GTGAATACAGTTGCATTTACTAGAACTtctct s panTro4.chr3_GL389630_random 35100 32 + 103936 gtgaatacagttgcatttactagaacttctct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199720349 32 + 202140232 GTGAATACAGTTGCATTTACTAGGACTTCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120810719 32 + 123690457 GTGAATACAGTTACATTTACTAGAACttctct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 860719 31 - 74750902 G-GAATAACATTGCATTTACTAGAACttctct i calJac3.chr17 C 0 C 0 s canFam3.chr33 29030791 31 + 31377067 -acgataaagttgtatttactagaatgtcttt i canFam3.chr33 C 0 I 1572 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=729554.000000 s hg38.chr3_KI270935v1_alt 72637 987 + 197351 ctctctctc----ctctctctctctttttaatttttttttttccagacagagtc-tgctctgtcccccgccaggctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgagtagctgggattataggcatgcaccaccatgcctggctaatttttggcattttaaatagagacagggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggccCTAGAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTAGGAACAcagtcagctgttgct--taatgatggagacacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaatgaaatcgagagtttacataaacctagatggtttatatatatatttatttacatgtttgttttccacatggaaagccacatgtcccagcacatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttatggggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTTCTTggctgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgagacgggtggatcacttgaggtcaggagttcaagaccagcctgggtaacatggtgaaataccatcgctatt-aaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagattgcgccactgcgctctagcctgggt s panTro4.chr3_GL389630_random 35132 972 + 103936 ctctctct-----------------tttt--ttttttttttttcagacagagtc-tgctctgtcccccgccaggctggagtgcagtggtacgatctcggctcactgcaacctccaccttctgggttcaagccattctcctgcctcagcctcccgagtagctgggattataggcatgcaccaccatgcctggctaatttttggcattttaaatagagacagggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcccacctccgcctcccaaagtgttgggattacaggcgtgagccaccatgcctggccctagaacttctcttgggagaaaactagatgtcattggtaggaacacagtcagctgttgct--taatgatggagatacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaataaaatcgagagtttacataaacctagatggtatatatatatatttatttacgtgtttgttttccacatggaaagccacatgtcccagcaaatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttacggggccaccgtcatatatatggtccatcatcggtctaaacatcgtgatgtggcacaaggctgTACTTCTTggccgggtgcggtggctcacgcctgtaatcccagcactttgagaggccgagacgggtgcatcacttgaggtcaggagttcaagaccagcctgggtaacatggtgaaataccatcgctgtt-aaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgacccgagatcgtgccactgcgctctagcctgggt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199720381 981 + 202140232 CTCTCTCTCtttttttttttttttttttt--ttttttttttttcagacagagtc-tgctctgtcccctgccaggctggagtgcagtggtacgatctcggctcactgcaatctccaccttctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattataggcatgcaccaccatgcctggctaatttatggcattttaaatagagacaaggtttcgccatgttagccaggctagtcttgaacttctgacttcaggtgatctgcctgcctctgcctcccaaagtgttgggattacagacgtgagccaccgtgcccggccCTAGAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTAGGAACAGagtcagctgttgct--taataatggagatacattctgagaaatgcatcatcagatgatttctttgttgtatgaatatcatagagttcacacaacaatgaaatcgagagtttacataaacctagatggtatata--------tatttatatgtttgttttccacgtggaaaaccacatgtcccagccaatgtcccattactgaacatcagtcatttcccctgcttgatcctcaaggccaatatcgagcaccatatatcgggtttctgcatatgccctattataatcttacggggccactgtcatatatatggtccatcatcagtctaaacatcgtgatgtggcacaaggctTTACTTCTTggccaggcgtggtggctcatgcctgtaatcccagcactttgagaggctgagatgggtggatcacttgaggtcaggagttcaagaccagcctggctaacatggtgaaataccatcgccatt-aaaatacaaaaattagccaggtgcgctggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacctgggagaaagaggttgcagtgagccaagactgtgccactgcactccagcctgggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120810751 958 + 123690457 ctctct-------------------------ttttttttttttcagacagagtc-tgctctgtccgctgccaggctggagtgcagtggtatgatctcggctcactgcaacctccaccttctgggttcaagcgattctcctgccttagcctcccgagtagctgggattataggcgtgcaccaccatgcctggccaatttttggcattttaaatagaggcagggtttcgccatgttagccaggctagtctcgaacttctgacttcaggtgatctgcccgcctccacctcccaaagtgctgggattacaggcctgagtcac--tgcccggccCTACAACTTCTCTTGGGAGAAAACTAGATGTCATTGGTGGGAACAcagtcagctgttgct--taatgatggagatacattctgagaaatgcatcatcagacgatttcatttttgtatgaatatcatagagttcac---acaatgaaatccagagtttacataaacctagatggtatata----tatttatttatatgtttgttttccaaatggaaagccacatgtcccagcaaatgtcccattactcaatatcagtcatttcccctgcttgatcctcaaggccaatatcaagtgccatatattgggtttctgcatctgccctattataatcttacagggccaccgtcatatatatggtccatcatcggtctaaacatcatgatgtggcacaaggctgTACTTCTTggccgggcgcagtggctcacgcctgtaatctcagcactttgagaagctgagatggatggatcacttgaggtcaggagttcaagaccagcctggctaacatggagaaataccatcgctactaaaaatacaaaaattagccaggtgtggtggtgggtgcctgta------atcccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagccgagatggcgtgactgtgctccagcctgggt i nomLeu3.chr11 C 0 I 2329 s calJac3.chr17 860750 944 - 74750902 ttt----------------------------tttctttcttttgaaacagagtcttgctctgtcc---accaggcgcgagtgcagtggcgtgatctcggttcactgcaacctccgccttctgcgttcaagcgattctcctgtctcagcctcccgagtagctgggattacaggtgcacagcaccatgcctggctaatttttggcattttgaatagagatggggtttcaccgtgttggccacgctggtcttgaactcctcacttcaggtgatctgcccacctctgcctcccaaagtct--ggattacaggcgtga-------------gcACCAGAGC-TCTCTTGGGAGATAAGTAGATGTCACTGGAAGGAACATAGTCAGGTAATAGTAAtgataatggagattcattctaagaaacgcatcatcagacagtttcactgttgtatgaacaccagagagttcacacggcaatgaaac--agagtttacataaacctagataatatatg--tatttttatttataagtatgttttccacatgagaagccaagtgtcccagcaaatgtcccgttact----atcagtcatttcccctgcttgacccacaatgccagtatcaagtggcatctactgggtttctgcatacgccctattatactcttacgggaccgccgtcatatatatggttcctcattggtctaaacatcattatgtggtgcaagaGTATTCTTCTTggccgggtgtggtggctcacatctataatcccagcactttgagaggctgacttgggcagatcac--gaggtcaggagttcaagaccaccctggccaacatggtgaaaccccatctctattaaaaatacaaaaattagccggatgcggtggtgcacacctgtaggccttgtctcagctacttgggaggctgagacaggggaatcacttgaatctgggaggtggaggttgcagtgagccaatatctcaccactgcactccagcctgggc i calJac3.chr17 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=5718.000000 s hg38.chr3_KI270935v1_alt 73624 7 + 197351 gacagag s panTro4.chr3_GL389630_random 36104 7 + 103936 aacagag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199721362 7 + 202140232 gacagag i ponAbe2.chr3 C 0 I 3419 s nomLeu3.chr11 120814038 7 + 123690457 gacagag i nomLeu3.chr11 I 2329 C 0 s calJac3.chr17 861694 7 - 74750902 ggcagag i calJac3.chr17 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=16070.000000 s hg38.chr3_KI270935v1_alt 73631 24 + 197351 ggagactccatct----caggaaaaaaa s panTro4.chr3_GL389630_random 36111 24 + 103936 ggagactccatct----caggaaaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199724788 24 + 202140232 ggagactccatct----caaaaaaaaaa i ponAbe2.chr3 I 3419 C 0 s nomLeu3.chr11 120814045 24 + 123690457 ggagactccatct----caaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 861701 28 - 74750902 ggagattctgtctGGGGCGGGGAAAGAA i calJac3.chr17 C 0 I 2843 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=70032.000000 s hg38.chr3_KI270935v1_alt 73655 147 + 197351 aaaaaaaaaaa--CCCAAagctatttattgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaaggtaccagttggccaccttcaatattatcaacattatgcTCAAGCTCTTATCCCCCATAttt-aaaaa s panTro4.chr3_GL389630_random 36135 148 + 103936 aaaaaaaaaaa-aCCCAAagctatttattgtggaaaaattcaaacacatgcaaaagtaaagagaataggatgatgaacccaaggtaccggttggccaccttcaatattatcaacattatgctcaagctcttatCCCCCATAttt-aaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199724812 150 + 202140232 aaaaaaaaaaaaaCCCAAAACTGtttattatggaaaaattcaaacacatgcaaaagtggagagaataggatgatgaacccaaggtaccagctggccagcttcaaaattatcaacattttactCAAGCTCTTATCCCTCATATTTAAAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120814069 145 + 123690457 aaaaaagaaaa----CCAaactatttattatggaaaaattcaaacacacgcaaaagtagagagaataggatgatgaacccaaggtaccagctggccagcttcaaaattatcaacattttgcTCAAGCTCTTATCCCCCATATTT-GAAAa i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e calJac3.chr17 861729 2843 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=557653.000000 s hg38.chr3_KI270935v1_alt 73802 772 + 197351 atataaccacaataccttatcagagccaaaacaaatatggtcgcacacctgtaatcccaacactttgagagactgaggcgggcagatcgcctgaggccagaagttcaagaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggcgggtacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccgagattgcgccactgcactccagcctgggcaacagagcaagactctgtctttaaaaaaaaaattaattaattaattaatttaaaaaactacttactatcgtttaatacctatcagtgttcatatttcccccacttgtcaaaaatatctt-gttatTCAGCAGCAAAGCAGAAGAGAAAAAGAAAAAATAAGATcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtttgagaccagcctgggtacaatagcgagactcagtctctacaaaaaaaaaat--ttgtttaaaaattagcaaggtgtgttgatgttcacctatagtcccagctattcagaaggctgaagtgagaaaattgcttgagccccagaagttgcggctgcagcgagctgtgaccataccactgcattccagtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaa-----------------------------------------aaaaaaaaaaaaaaagaaagaa s panTro4.chr3_GL389630_random 36283 755 + 103936 atataaccacaataccttatcagagccaaaacaaatatggccgcacacctgtaatcccaacactttgagagactgaggcgggcagatcacctgaggccagaaattcaacaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattagctaggcatggtggcgggtacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagcaagactctgtcttttaaaaaaaaactaattaattaattaattttaaaaactacttactatcatttaatacctatcagtgttcatatttcccccacttgtcaaaaatatctt-gttattcagcagcaaagcagaagagaaaaagaaaaaaaaaggtcagatgtggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtttgagaccagcctgggtacaatagcgagactcagtctctacaaaaaaaaaaaaattgtttaaaaattag----gtgtgttgatgttcacctatagtcccagctattcagaaggctgaagtgagaaaattgcttgagccccagaggttgcggctgcagcgagctgtaaccataccactgcattccagtctgctgcaccgagtgagaccatgtctcaaaaaaaaaaaaa--------------------------------------------------------gaaagaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199724962 751 + 202140232 ATATAACCACAATGCCTTATCAGAGCCAAAACAAATATGGCCAcacacctgtaatcccaacacattgggagactgaggtgggcagatcacctgaggccagaagttcaagaccagcctggccaacatggtgaaacccctgtgtctactaaaaatacaaaaattatctaggcatggtggcggatgcctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaaccagggaggtggaggttgcagtgagccaagactgcaccactgcactccagcctgggcaacagagcaagactctgtctct---aaaaaaacaaaTTAATTAATTAATT--AAAAACTACTTACTATCGTTTAATACCTATCAGTGTTCATATTTCCCACACTTGTCAAAAATATCTT-GTTTTTCAGCAGCAAAGCTGAAGAGAAAAAGAAAAA--AAGTTcaggtgcggtggctgatgcctgtggtctcagcactttgggaggccaagatgggaggatcgctggagctcaggagtttgaggccagcctgggtataatagcgagactcagtctctacaaaaaaaaatt--ttgtttaaaaattagcaaggtgtgttgatgtccacctatagtcccagctgttcagaaggctgaagtgagaaaattgcttgagccccagaggttgtggctgcagcgagctgtgaccgtacgactgcattccagtctgctgcactgagtgagaccatgtctcaaaaaaaaaaaaa-------------------------------------------------------agaaagaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120814214 778 + 123690457 atataaccacaataccttatcagagccaaaacaaatatggctgcacacctgtaatcccaacactttgggagactgaggcaggcagatcacctgaggccaggagttcaagaccagcctggccaacatggtgaaacccctgtctctaccaaaaatacaaaaattagctaggcatggtggcgggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagccaagattgcaccactgcactccagcctgggcaacagagcaagactctgtctctaaaaaaaaaaataattaattaattt-----aaaaactacttactatcatttaatacctatcagtgttcatatttcccccacttgtcaaaaatatctt--tttttcagcagcaaagcagaagagaaaaagaaaaaaaaaggtcaggtgcggtggctgatgcctgtagtcccagcactttgggaggccaaggtgggaggatcactggagctcaggagtttgagaccagcctgggtacaatagtaagactcagtcgctac---aaaaaatt--ttgtttaaaaattagcaaggtgtgttgatgtccacctata--------------------------gggaaaattgcttgagccccagaggttgcagctgcagcgagctgtgatcgtaccactgcattccagtctgctgcactgagtgagaccatgtctcaaaaaaaaaaaaCgaaagaacgaacgaacgaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 864572 754 - 74750902 ataAAACCACAAAACCTTATTAGAGCTAAAACAAATGTGGCTGCA---ctgtaatcccaacactttgggaggctggagtggacagatcacctgaagccaggaatctgagaccagcctggccaacgtggcaaaatccccgtctctcctaaaaatacaagaattagctgggcatggtggcaggtgcctgtaatcccaactagtcaggaggctgaggcaggagaatcacttgaacctgggagatggaggttgcagtgagccgagaccgtgccattgcactccagcctgggcaacagagcgagactccttctctaaaacaaaaacaaacaaataa---------aacaaCCACTTACTATTGTTTAATACCTATCAGTGTTAATATTTCCCCCATTTGTCAAAAATATCTTTTTTTTTCAGCTGCAAAGTAGAAAGGAAAAAGAAAAAA-AAggctgagcgtggtggctgatgcctgtagtcccagcacttcgggaggtcaaggtgggaggatcacttgagctgaggagtttgagaccagcctgaggacaatagcaagactcggtctctac-----aaattg--ttttttttaaattagccaagtgtgttg-tgcacacctgtagtcccagctattcagaaggctgaagtgggaaagtggcctgagccccagaggctgaggatgcagcaacccatgactgtaccactgcactgcagtctgctcgacccagggagaccgcgtctcaaaaaaataaaat-----------------------------------------aaaataaagaaGGAAGGCAGGA i calJac3.chr17 I 2843 I 1877 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=1146.000000 s hg38.chr3_KI270935v1_alt 74574 2 + 197351 ag s panTro4.chr3_GL389630_random 37038 2 + 103936 ag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199725713 2 + 202140232 ag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120814992 2 + 123690457 ag i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29030822 1572 + 31377067 I e calJac3.chr17 865326 1877 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=161345.000000 s hg38.chr3_KI270935v1_alt 74576 244 + 197351 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-acgcacac-atgtttaactagcatatttcttaaatgtctttaaatctatacctagatcagtgccattttttcatgtc---------------atttagctgttgaacgaaccaggtactgtgtcctgcggcatatcctaccttctgggtttgactgattgaatctttgtggatgtccctctg-cctctgtctttcctgaactctggtagt-----t s panTro4.chr3_GL389630_random 37040 242 + 103936 aaaaatgcctttttacagctggtttattcaagtcaagatccaaaaaagat-atgcacac---gtttaactagcatatttcttaaatgtctttaaatctatacctagatcagtgccattttttcatgtc---------------atttagttgttgaacaaaccaggtactgtgtcctgcagcatatcctaccttctgggtttggctgattgaatccttgtggatatccctctg-cctctgtctttcctgaactctggtagt-----t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199725715 249 + 202140232 aaaaaTGCCtttttacagctggtttattcaagtcaagatccaaaaaaggt-acgcacac-atgtttaactagcgtatttcttaaatgcctttaaatctatacctagatcagtgccattttttgatgtc---------------atttagttgttgaacgaagcagatactgtgtcctgtggcatatcctaccttctgggtttggctgattgaatctttgtggatgtccctctg-cctctgtctttcctgaaatctggtagttgagat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120814994 250 + 123690457 aaaaacgcctttttacagctggcttcttcaagtcaagatccaaaaaagataacgcacac-atgtttaactagcatatttcttaaatgtctttaaatctatacctagatcagtgccattttttgatgtc---------------atttagttgttgaacgaaccaggcactgtgtcccgcggcatatcctaccttctgggtttggctgattgaatctttgtggatgtcgctctg-cctccgtctttcctgaaatctggtaattgagat i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29032394 252 + 31377067 aaaaagacctttttgcaattggcttatccaa-tcaggatccaaacaaggt-ccacaagttatatttaactggtatatttcttaagccccttcaaatct--------atcagtccccttttcctttttcttcaagctgttttttttttaattattgaataaaccaggtgatttgttctgtagaatgtcctacactctggatttatctgattgaacccatgtggatgcccctctgtcccctacatttgctgaaacctggtaat-----t i canFam3.chr33 I 1572 I 234 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e calJac3.chr17 865326 1877 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=26175.000000 s hg38.chr3_KI270935v1_alt 74820 49 + 197351 gagatcaggactggagatttcttaggcaggaagaatccataggtgggta s panTro4.chr3_GL389630_random 37282 49 + 103936 gagatcaggactggagatttctttggcaggaagaatccataggtgggta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199725964 49 + 202140232 gagatcaggactggagatttctttggcaggaagaatccataggtgggta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120815244 49 + 123690457 gaaatcaggactggagatttctttgacaggaagaatccatagatgggta i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e canFam3.chr33 29032646 234 + 31377067 I e calJac3.chr17 865326 1877 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=191795.000000 s hg38.chr3_KI270935v1_alt 74869 296 + 197351 cttcctatcgcacctcgaaggagacacaaagtgtccagctgtcccacttttactggtgttaaacttcatccaccagata--------gtgcacccattataaa-attc------------tgtccactaa---------------tgatttgtgctgagatccacttctcattaggggctgccaagtagtgcttttcta------tcattctttctgcacttgttagccgaaggttctctgtcgtgaagatatttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttatttttcatcttcataataatgagctagc s panTro4.chr3_GL389630_random 37331 296 + 103936 cttcctatcgcgccttgaaggagacacaaagtgtccagctgtcccacttttactggtgttaaacttcatccaccagata--------gtgcacccattataaa-atcc------------tgtccactaa---------------tgatttgtgctgagatccacttctcattaggggctgccaagtggtgcttttcta------tcattctttctgcacttattagccgaaggttctctatcgtgaagatatttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttacttaccattttcataataatgagctagc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199726013 292 + 202140232 ctt-ctatcacacctc---tgagacacaaagtgcccagctgtcccacttttactggtgttaaacttcatccaccagata--------gtgcacccatgataaa-attc------------tgtccactaa---------------tgatttgtgctgagatccacttttcattaggggctgccaagtagtgcttttcta------ttgttctttgtgcacttgttagccgaagtttctctatcatgaagatatttcccttgtcaactatttggcttggatggaaaggctggatcaatgtttgattctttatttatcatttttgtaataatgagctagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120815293 296 + 123690457 cttcctattgtgcctcgaaggagacacaaagtgtccagctgtcccacttttactggtgttaaacttcatccaccagata--------gtgcacccattataaa-attc------------tgtccactaa---------------tgatttgtgctgagatccactttttattaggggctgccaagtagtgcttttcta------ttgttctttctgcacgtgttggccgaagtttctctatcgtgaagatatttcccttgtcaactattttgcttggatggaaaggctggatcaatgtttgattctttctttatcattttcgtaataatgagctagc i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29032880 332 + 31377067 cttcctgttgcatcccaaagaagacacccgaagtccagtggtcccac-cttgct-atgttaaccttgatctgccagatgcatctgttgtaggtcccttataaacattcccctgcaacctttctccagtggttttaatcccggcgttgattgttgcttagatccaattttc-ttatgggtcaccgaatgctggctttctagctctgtcactccttctgcatttcttagctgcaattcttcta---taaagacttttcccttgtcaaccacttggcttgtatggaaaggctggataaatgtttaattcttcatttaccattttcaggataatgagcctgt i canFam3.chr33 I 234 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65397820 1273 - 98207768 I e calJac3.chr17 865326 1877 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=39300.000000 s hg38.chr3_KI270935v1_alt 75165 48 + 197351 tcctcggcacccCGGGGGAAGTTGTCTTCAAATGCTgccttgaagcat s panTro4.chr3_GL389630_random 37627 48 + 103936 tcctcggcacccCGggggaagttgtcttcaaatgctgccttgaagcat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199726305 48 + 202140232 tccttggcaccccgggggaagttgtcttcaaatgctgccttgaagcat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120815589 48 + 123690457 tcctcagcaccctGGGGGAAGTTGTCTTCAAATGCCgccttgaagcat i nomLeu3.chr11 C 0 C 0 s mm10.chr16 65399093 48 - 98207768 tcctttatagctgaaGGAAGGCTGGGTTCAAGTGTGACCTTGATATGT i mm10.chr16 I 1273 I 1 s canFam3.chr33 29033212 48 + 31377067 tccttagcaacccagggaagaatgaatttAAACATGACcttgaaggag i canFam3.chr33 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e calJac3.chr17 865326 1877 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=1080317.000000 s hg38.chr3_KI270935v1_alt 75213 1062 + 197351 -agaatatttaattctaatggatatgggagggaagggccttccaagccgagggaagagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaaCAGCAGAGCTCCGTAGCACGTGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTGGGAAAGCAGGGGAGAGGTCAGGATTGCTGGTTTGACTCC----CAGCCATG-----------------------GGCAAAAGGTTCTCCCCTTGTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatacattttatactctgacccagtaagtgcatctgtgtgtataaaaaccaacagaaatttcaaaa-agaact-cagttgac------ttttacatacaatgtatgtgggtctattctattctatttcattcagtgt--------------------------------------------------------------------------catcc--tgttgaaataaatgttggttatg-----------accactgaattgaactcagtctcacagattgtcggcaac-cttagtctgGGTGGCTCCTGGGGCTCTATTTCCACTCCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGCACCAGGCTCTGGAGAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AGCCA-GGCC-ACCCTCACCTTCAGAGTCTTGACCCCCCAGACCACA---------CTACCGGACACCTGCTGGC-CCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAG-GGCTCAGAGGCCTGCTCCCTGTTGATCGTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTTAGCCCTAAAGAGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAAGAGTGTTGAGAGTCCTGGG-GTGACAACACCTGGGTCCCCTGCTCACCTGAGCCACAGACTCGCCAGGTAACTGGGCCAGCGTCCCTCCTGCCCACGCCTTGCTTGCCGC s panTro4.chr3_GL389630_random 37675 1060 + 103936 -agaatatttaattctaatggatatgggagggaagggccttccaa-ccgagggaacagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaaCAGCAGAGCTCCGTAGCACGTGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTGGGAAAGC-GGGGAGAGGTCAGGATTGCTGGTTTGACTCC----CAGCCACG-----------------------GGCAAAAGGTTCTCCCCTTGTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatacattttatactctgacccagtaagtgcatctgtgtctataaaaaccaacagaaatttcaaaa-agaact-caattgac------ttttacatacaatgtatgtgggtctattctattctatttcattcagtgt--------------------------------------------------------------------------catcc--tgttgaaataaatgttggttatg-----------accactgaattgaactcagtctcacaaattgtcggcaac-cttagtctgGGTGGCTCCTGGGGCTCTATTTCCACTCCAGCCCTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGACCAGGCTCTGGAGAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AGCCA-GGCC-ACCCTCACCTTCAGAGTCTTGACCCCCTAGACCACA---------CTACCAGACACCTGCTGGC-CCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAG-GGCTCAGAGGCCTGCTCCCTGTTGATCGTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTTAGCCCTAAAGAGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACGGAGAAGAGTGTTGAGAGTCCTGGG-GTGACAACACCTGGGTCCCCTTCTCATCTGAGCCACCGACTCGCCAGGTAGCTGGGCCAGCGTCCCTCCTGCCCACGCCTTGCTTGCTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199726353 1056 + 202140232 -agaatattttattctaatggatatgagagggaagggccttccaagctgagggaacagcttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttagagaacagcagagctcagtAGCACGTGCAACAAGAGGCTTTTTGAGTGAGAGCCCTGAGCATGATATGGTGGGAAAA--GGGGAGAGGTCAGGATTGCTGGTTTGACTCC----CAGCCATG-----------------------GGCAAAGGGTTCTCCCCTTGTCTATACAATGAAGACATCTCTCTAGATcagtggctttccaacgtttctggccccagttcactttaataaatacattttttactctgacccagtaagtgcctcca----tctaaaaaccaacagaaatttcaaaa-agaact-caattgac------ttttacatacaatgtatgcgggtctattctattctatttcattcagtgt--------------------------------------------------------------------------catcc--tgttgaaataaatgttggttatg-----------accaccgaattgacctcagtctcacaaattgtcggcaac-cttagtctgGGTGGCTTCTGGAGCTCTATTTCCACTCCAGCCGTTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACACAGGACCAGGCTCTGGAGAAGAGGGACAACATGAGAAGAGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTGAACATGAGGCAAAAGCCAGGCCACACTCAGAGGCTGCGGCCCC-----------AGCCA-GGCC-ACCCTCACCTTCAGAGTCTTGACCCCCCAGACCACA---------CTACCAGACAAGTGCTAGC-CCTGTTTCCACAACAGACTGGCTCAGCCACACCCAGGCCCACAG-GGCTCAGAGGCCTGCTCCCTGTTGATCTTGTCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTTAGCCCTAAAGAGCCAGGCGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACAGAGAACAGTGTTGAGAGTCCTGGG-GTGGCAACACCTGGGTCCTCTTATCATCTGAGTCACAGACTCACCAGGTAACTGGGCCAACATCCCTCCTGCCCATGCCTTGCTTGCCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120815637 1058 + 123690457 -agaatattttgttctaatggatatgggagggaagggccttctaagccaagggaacaacttgagcaaaggctcagaggcaggag--------------------------------------aatgcagggtgtttag-gaacagcagagctcagtAGCACATGCAACAAGAGGCTTTTTGAGTGAGGACCCTGAGCACGATATGGTGGGAAAGCAGGGGAGAGGTCAGGATTGCTGGTTTGACTCC----CAGCCATG-----------------------GGCAAAGGGTTCTCCCCTTGTCTATACAATGAGGACATCTCTCTAGATcagtggctttccaacgtttctggcccccattcactttaataaatacattttatactctgacccagtaagtgcatccgtgtctataaaaaccaacagaaatttcaaaa-agaact-caattgac------ttttacatacaacgtatgtggg-----tctattctatttcattcagtgt--------------------------------------------------------------------------catcc--tgttgaagtgaatgttggttatg------------ccaccgaattgacctcagtctcacaaactgtcggcaac-cttagtctgGGAGGCTCCTGGGGCTCTATTTCCACTCCAGCCATTTCTGGTTGATCCCTGGTCTTGGTGACAACCTGACGCAGGACGAGGCTCTGGGGAAGAGGGACAATATGAGAAGGGAAGCTGATCACTTGCAGGAGGCTCCTGAGCTCAATATGAGGCAAAAGCCAGGCCAAACTCAGAGGCTGTGGCCCC-----------AGCCA-GGCC-ACCCTCACCTTCAGAGTCTTGACCCCCCAGACCACA------CTTCTACCAGACACCTGCTGGC-CCTGTTTGCACAACAGACTGGCTCAGCCACACCCAGGCCCACAG-GGCTCAGAGGCCTGCTCCCTGTTGATCTTGGCAACTTTGAAAGGCCTTCAAGTTTATCCCTAAACAAAGCCCTCCAGTTTAGCCCTAAAGAGCCAGGTGTTAACCTAACAGGAAGCAATTTGGAAGGTCAAAGTCAAGTAGACAGAGAACAGTGTTGAGAGTCCTGGG-GTGACAACACCTGGGTCCTCTTATCATCTGAGCCACAGACTCGCCAGGTAACTGGGCCAACATCCCTCCTGCCCACGCCTTGCTTGCCCC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 867203 1054 - 74750902 -AGAATATTTTCTTCTAAtggatacgggaggggagagccttccaagcagagggaacagcttgagc-aaggctcagaggcaggag--------------------------------------aaggtagggtgtttggagaaCAGCAGGGCTCGGTAGCACGTGCAACAAGAGGCTTTCTGAGTGAGGATCCTGAGCATAACGTGGTGGGAAAGC-AGGAAGAAGTCAGGATTGCTGGTTTGACTCC----CAGCTGTGTCAACAACTGAAGCATGACCACCGGAAAAGGGCTCTCCCCTCGTCTACGCAATGAGGACATCTGTCTAGATcagtggctttcacacgtttctgg-cccaattcacatgaataaatacatgttatacttttacccagtaaatgcatccatgtgtgtaaaaaccaacaaaagcttcagaa-agaact-ccatttac------ttttacatgcagcgtatgtgggcctatcctattctgtttcattCAGCGT--------------------------------------------------------------------------CATCC--CGTTAAAATATGTCTGAG---------------------------GCTCTCAGACTCACAGATGGTTTGCAAG-CTTAGTCT-GATGGTTCCTGGGGCTCTGTTTCTGCTTCAGCCCTTTCTGGTTGATCCCCGGTCTCAGTGACAACCTGATACAGGACCAGGATCTGGGGAAGAGGGACAACATGAGAAGGGAAGCTGATCACTTGCAGGACGCTCCGGAGCCCAACAGGAGGCAGGAGCCAGGCTAGACTCAGAGGCTGTGGTCCC-----------AGCCC-GCCC-ATCCTCACCGTC--AGTCTTGACCTCCCAGACCACTGCTTCCCTTCCACCAGACACCTGCTGGC-CCTGTTTCCACAACAGACTGGCTCA-CCACACCCAGGCCCATGG-GGATTAGAGGCCTGCTCCCTGTTGATCTTGTCAACTTTGAAAGGCCTTCGAGTTTATCTCTAAACAA-------------AGCCCTAAACAGTCAGGTGTTAACCTAATAGGAAGCAATGTGGAAGGTCAAGGTAAAGCAGTT---GAACAGCATTGAGAGTCCTGCG-GTGAGAACACCTGGGTCCGCTTCTCACCGAAGCCATAGACTTGCCAAGTAA-TGGGCCGTAGTCCCTCCTGCCAATACCTTCTTTGCCCC i calJac3.chr17 I 1877 I 308 s mm10.chr16 65399142 919 - 98207768 -AGAACCATTTCTGCTAATGGATTT-----GGACAGGCCTCCCAAGCTGATGACACAGCATACACCAAGGCTCAGAAGCAGGTG--------------------------------------CAGGCAAGGT--------------------------------------------------GTGACACTCTTGGGAGCGGGGTGATAGGAAAGCCAGAAAGATGCTGCTTCTCCAGGTTTGCAGCCAGCTCAAGCATG-----------------------GCTTTGGGTACCATCCTCCATCTATAGAATGAGAGCCTCTCTCTAGA-------CTTTCAGGCTTTTCTGGCTCCGATCCATTTTTACAAGCATTAATTGTTCTGTGACCTAGTTCACTCATCCATG-------GAGCTAAGGCAACTTTTAAAG--------CAACTTAT------TCTTGTATTTAATGCATGCAGGTCTATTTGGTTCAATTTAATTCTGCCT----------------------------------------------------------------GGCTCCATTCCATCCTGTGTCACACTGCCCATCAGTCACAGTAAAGTAAACACCATCGGATTGATCTCTGATTCACAAACAAG-GCCACC-CTTCATTTGGACG------------CTTCTCCCACCCTTGCTCTT--TAGTTGATTCTTGGTCTT----------------------AGATGCTTGAGAAGAGGGATGGCTTAGGGATGG-AGTAAGCCACCAGTAGGAGGCCCCTGAACTGAGTGTGA-ACTGGAGCCTG---AGGCTCA---GCCAGAGCCCC-----------AGCCCTGCCC-ACTCTTACTTTGAGAGG-------TCCCGGACCTCT---------GCTCTCTGCACTTCAGACT-CCTGTTTTCACAACACTTTGGCTTGGCCACACCCAGCCTTGCTTCCTTTCAAAGGCCAGCT-TCTGTTGACCCTGTCAACTCTGAAAGTCC-TCAAGTTTATCCTTAAACAAGGCCCCT-----------------GGCAGGTGCTAAGCTAACAGGAATCAATTGAAAAG---AAAGC------------AAGCAGCATTAAAA---TTAAA-ATTAAGCTATCTGGGCCCA---GTCCCATGAACCA--GACTCTCCAGGAACATACCTCACC--CCCGCCTGCCCA-GTTTCATTTTTTCC i mm10.chr16 I 1 I 2 s canFam3.chr33 29033260 1169 + 31377067 aagaatgctttcctttagtggctatgggagggaagcgcttac---acagaggagacagcttgagcaaagactccagagcagcagtatgcagggtggttttgttttgttttgttttgttttttaatgcagggtgttgagAGAGTGGCAGAGATCGGTAGCAAGTGTAACAACAGGTTGTGTGAATgagaagcccg--------gtgcggaaaaagcagggaggcagtcagaattgtcggttctcctcc----cagctctgtctcccactcaagcatgacctttggaaaacggcttttccatt----------------------tctagATcagtagctttcaaacttttctggccacaattcacattaatgaatatattatacacggtgattcagtgcacacgtacatgtatataaaaac----aaaaatttcaaaaaagaactccaaataacttataattatatatatgatgtatgtggatatcttccattccattccattccattccattccattccattccattccattccattccattctattcctttccattctcttccatccattttgctccattccatct--tactaaaataaatgccagtcatg-----------accactgaattgatttctgactcacatatgtgctacaactctttgtttggataaTCTCTAGGGCTTTTTTCCATATCCAGCCCTCTTTGATCCAT-CCTGGTATTGGTGACAACCTGGCACTGAACCAGGAACTTGGGAAGAGGGATGATGTGAGAAGGGGAACTAATCATTTGCAGGAGGCTCCTT-GCCCAACAAGAAGCAGAAGCCAGGCCAAACTCAGAGGCCATCCCCCCCAACCCCCCCGAGCCT-GGCCTGCCGTCACCTTGAGAGGTCTGACCTCCCAGGCTACTGCTCCCCTCTCACCGGACACCTACTGGTGCCTGTTTCCATAACAGGCCAGGCTGACCACACCTAGCCCCACATCCTCTCAGGAGCCTGCTCCTTGTTGATCTTGTCAACTTTGGAAGGCCCTCAAGTTTATCCATAAACAAAGCCCCG-------------------CAGGTGCTAAGCTGACAGGAGGTGACTGGGTAGGTCAAGGTAAagcagagaaagaacagcactgagagtcctgggtgtgagatcccctggggctcattcccccctgagccactgactcacc----acctgggccacatccctacctgccaatgccttgctttcccc i canFam3.chr33 C 0 I 1 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=126039.000000 s hg38.chr3_KI270935v1_alt 76275 110 + 197351 ACTCTTAAAGAAGATGCATCCCCTTCTCTTGGAGGGAAT-GACAATGACCAGATCACAACTGAGCTGAGCAATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT s panTro4.chr3_GL389630_random 38735 110 + 103936 ACTCTTAAAGAAGATGCATCCCCTTATCTTGGAGGGAAT-GACAATGACCAGATCACAACTGAGCTGAGCAATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199727409 110 + 202140232 ACTCTTAAAGAAGATGCATCCCCTTATCTTGGAGGGAAT-GACAATGACCAGATCACAACTGAGCTGAGCAATTTGGGGAAATTTGGGCAGGGG--GTAGAGTTGGCAGAACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120816695 110 + 123690457 ACTCTTAAAGAAGATGCATCCCCTTATCTTGGAGGGAAT-GACAATGACCAGATCACAACTGAGCTGAGCAATCTGGGGAAATTTGGGCAGGGG--GTAGAGTCGGCAGAACT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868565 107 - 74750902 ACTCTTAACGAAGATGCACCCCCTTACCTTGGAGGGAAT-GACCAAGACCAGATCACAGCTGAGCTAAGCACTTTGGGGAAAT---GGCCGGGG--GTGGAGCTGGCAGAACC i calJac3.chr17 I 308 C 0 s mm10.chr16 65400063 103 - 98207768 TCTCTTAAAAGAGGTGCACCTGCTTATTT----GTGGTT---TAATAAACAGATAACCACTGAGTTGAGCAACTTAGGGAAAT---GGTTAGGGAAGCAGAGCTGACGAAACT i mm10.chr16 I 2 I 716 s canFam3.chr33 29034430 108 + 31377067 tcccttaaagaagATAACCCCCCTCACTCTGTAGTGGGTAGGCAATAGCCCAGATATGATCGAAGTGAGCAACTTGGGAAAAT---GGTTAGAA--TTAGGGTTGATGAAACC i canFam3.chr33 I 1 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=33744.000000 s hg38.chr3_KI270935v1_alt 76385 34 + 197351 GGTTTGTAAACAGGGCTCTGGAAGACCTTCCTCT s panTro4.chr3_GL389630_random 38845 34 + 103936 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199727519 34 + 202140232 GGTTTGTAACTAGGGCTCCGGAAGACCTTCCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120816805 34 + 123690457 GGTTTGTAAATAGGGCTCCGGAAGACCTTCCTCT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 868672 34 - 74750902 ATTTTGTAAGCTGGGCTCCTGGAGACCTTCCTCT i calJac3.chr17 C 0 I 9054 s canFam3.chr33 29034538 34 + 31377067 GCTTTGTGATTAGGGACCATGGCGACCTTCCTCC i canFam3.chr33 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=172336.000000 s hg38.chr3_KI270935v1_alt 76419 301 + 197351 AACTGTGGGGAGTGGGGGAGGGGTTtctc--tccctcttaggcactctcttctctgctgttttctc-----tatt-----tctctcttc---gctgtcactcccattaccgtcctcatcttatctcccccttttctctccttctctctctctctG--------------------------TTTaataacagctttattgagagataatttacaggatgtgagatttacccttttgtacaattcaccatgtgtacatttcagtgttgttcagtgtattcacagggt--tgcagaaccatcactgctgtcttattttaTTTTTTTGGCACtttttggtagagaca s panTro4.chr3_GL389630_random 38879 301 + 103936 GACTGTGGGGAGTGGGGGAGGGGtttctc--tccctcttaggcactctcttctctgctgttttctc-----tatt-----tctctcttc---actgtcactcccattaccgtcctcatcttatctcccccttttctctccttctctctctctctt--------------------------tttaataacagctttattgagagataatttacaggatgtgagatttacccttttgtacaattcaccgtgtgtacatttcagtgttgtttagtgtattcacagggt--tgcagaaccatcactgctgtcttattttaTTTttttggtactttttggtagagaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199727553 306 + 202140232 AACTGTGGAGAGTGGGGGAGGGGTT--TC--CCCCTCTTAGGCActctcttctctgctgttttctc-----tatt-----tctgtcttctttgctgtccctcccattaccatcctcatcttatctcccccttttctctccttctctctctctctg----------------------tctttttaataatagctttattgagagataatttacatgatgtgaaatttacccttttgtacaattcaccatgtgtacatttcagtgttttttagtgtattcacagggt--tgcaaaaccatcactgctgtcttattttaTTTttttggtactttttggtagagaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120816839 313 + 123690457 AACTGTGGGGAGTGGGGGAGGGGTTTCTC--TCCCTCTTAGGCACTCTCTTCTCTGCTGTTTTCTCGATTGTCTT-----TCTCTCTTCTTTGCTGTCACTCCCGTTACCCTCCTCATCTTATCTCCCCCTTTTCTCTCCTCCTCTCTCTCCCTG----------------------TCtttttaataacagctttattgagagataatttacatgatgtgaaatttacccttttgtacaattcaccatgtatacatttcagtgttttttagtgtattcacagggt--tgcaaaaccatcactgctgtcttcttttaTTTttttggtactttttggtagagaca i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29034572 269 + 31377067 AACTCTGTGGGGT---------TTTTCTCTGTCCCTCTT-GTCACACTTCTGTCTGTTGTTTACTT-----TATTGCTTCTCTTTCTTCCTTCCCGCCACATCC-CTGCCAGCCTCCTCTTGTCT--CTCTTCTCTCTCCTTCCTTCTTTCTCTCAGCTCCGTCTCACTCTTGTGCCTCTCTTTaataacagctttcctgagatataatgcctctaacatcaaattcatccttttaaa-----------gggtacacttcagtggtttttaatgtgttcacagagtcgtgcaaaaaaa---------------------------------------------- i canFam3.chr33 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e calJac3.chr17 868706 9054 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=58331.000000 s hg38.chr3_KI270935v1_alt 76720 109 + 197351 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcctggc s panTro4.chr3_GL389630_random 39180 109 + 103936 gggttttgccacgttggccaggctagtctcaaactcctgacctcaaatcatctgcctgcctcggcctcccaaagtgctgggattacagctgtgagccactgcacctggc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199727859 109 + 202140232 gggtttcgccacgttggccaggctagtctcaaactcctgacctcaaatgatctgcccgcctcggcctcccaaagtgctgggattacaggtgtgagccactgcacctggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120817152 109 + 123690457 gggtttcgccacattggccaggctagtctcaaactcctgaccccaaatgatctgcccacctcggcctcccaaagtgctgagattacaggtgtgagccactgtgcctggc i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e canFam3.chr33 29034841 0 + 31377067 C e calJac3.chr17 868706 9054 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=216256.000000 s hg38.chr3_KI270935v1_alt 76829 303 + 197351 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctg-acccatcagcagtcactgcctggtccacacatctcaccagcccctggcaaccactaatatactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcatacaatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaatatcccattatatggatataccagatttagtt s panTro4.chr3_GL389630_random 39289 304 + 103936 cacctctgtctaatttcagaacatgtttgttatgccccaaataaactctgtacccatcagcagtcactgcctagtccgcacatctcaccagcccctggcaaccactaatgtactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcatacaatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaatattccattatatggatataccagatttagtt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199727968 304 + 202140232 cacctctgtctaatttcagaacatgtttgttaggccccaaataaactctgtacccatcagcagtcactgcctagtccccacatctcaccagcccctggcaaccgctaatatactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcatacaatacacggccttttgtgagtggcttcttttacttagcatgt--tttcgagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaatattccattatatggatataccagatttagtt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120817261 302 + 123690457 cAC--ctgtctaatttcagaacatgtttgttacaccccaaataaactctgtacccatcagcagtcactgcctagtccccacatctcaccagcccctggcaaccgctaatgtactttctgtcttgatggatttgtctattctaaacatttcatataaatggaatcatataatacacggccttttgtgagtggcttctttcacttagcatgt--tttcaagtttcattgttgttgtggcatgcatctgtacttcattcctttttatggctgagtaatattccattatacggatataccagatttagtt i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29034841 305 + 31377067 caccattgtctaatttcagaacatttcttcactccccaaaagtggccctgtaccctttagcagtcactccctgttccccataccac-ctggcccctggcaaacattaatctacttcccgtctctatgggcttccccgtggtggacatttcgcataaatggaatcctacaatatgtgggcatttgtcactgactgctttcacttagcatttcgtttctaggttcatccacgttgtcgtgtgtctcaggactccatttcttattatggctgaatagtatcccactgtgtaggggtaccatagtttgtt i canFam3.chr33 C 0 I 194 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e calJac3.chr17 868706 9054 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=213285.000000 s hg38.chr3_KI270935v1_alt 77132 338 + 197351 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctatgaatattcattgataggtttttgtgtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgttt-acattctgagaaactgtcaaattgtttttctttttt--ttcttttttttttttattcttttctgctgccacctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagcagtgtatgagggttccaatttctccacaccctcagcaacactt s panTro4.chr3_GL389630_random 39593 340 + 103936 ttagccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctatgaatattcattgataggtttttgtgtgaacatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgttt-acattctgagaaactgtcaaattgtttttctttttttcttttttcttttttttattattttctgctgccacctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagcagtgtatgagggttccagtttctccacaccctcagcaacactt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199728272 335 + 202140232 ttatccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataacactgctaggaatattcattgataggttttcgtgtgaatatgtgtttttaattctc--ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctatgtttaacattctgagaaactgtcaaattgtttttctttttt--cttttttctttttttattcttttctgctgccacctcatctccctaa----attttcaaagtggccgcaccattttgcaattccaccagcagtgtatgagggttccaatttctccgcatcctcagcaacactt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120817563 328 + 123690457 ttatccattcatcagttgaagggcatttgaattgtttctactatttggctattatgaataactctgctatgaatattcattgataggttttcatgtgaacatgtgtttttaatt-----ctaact--------acaggctcagaagtagggtttctgggtcatatgg-caactctgtgtttaacattctgagaaactgtcaaattgtttttctttttt----------tttttttattcttttctgctgccacctcatctccccaaattgattttcaaagtggctgcaccattttgcaattccaccagtagtgtatgagggttccaatttctccacatcctcagcaacactt i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29035340 293 + 31377067 ttatccattcatcagctgacaaacatttgatttgtttccactttggggtacttatgaataatgctcctttgaacatttatgtacaggtttttatggggac-tgtattttcatttctcttctgggtttattttcatatactcagaaatgggcttgctgcatcatatggttttcactctgttaaacattctgaggatctgccaaactgtttttttctgtt------------------------------------------------------ttccagagtggctgcgccatgcttcaatt---ccagcaatgtgtg-gggttccgatttctccacattctcaccaacactt i canFam3.chr33 I 194 I 862 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e calJac3.chr17 868706 9054 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=256001.000000 s hg38.chr3_KI270935v1_alt 77470 496 + 197351 caacacttgctttttttttttttttttttgagatggggtctcgctctgtcgccaggctggagtgcagtggcgtgatctcagctcactgcgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgtatttttagtagagac-gggtttcactatgctggccaggatggtctcaaactcctgaactcgtcatccacccatctcagtgttcccaagtgccgtgattacaggtgtgagccaccccacccagccaacacttgctgttttattttttatcttagccgtcctactggatgtggggtggtatctcattgtggtttggatttgcatttccttatgattaatgatgttgagtatctttcatgctcactggccacttgtgtatcttctttggagaaatgtctatttaaatcctttgtccagttttaaatttgattgACt s panTro4.chr3_GL389630_random 39933 495 + 103936 caacacttgc--tttttttttttttttttgagatggggtctcgctctgtcgctaggctggagtgcagtggcgtgatctcagctcactgcgacctctgcctcctgggttcaagagattctcgtgcctcagcctcctgagtagctgggactacaggtgcatgccaccacacccagctaatttttgtatttttagtagagacggggtttcactatgctggccaggatggtctcaaactcctgaactcatgatccacccgtctcggtgttccaaagtactgtgactacaggtgtgagccactgcacccagccaacacttgctattttattttttatcttagccgtcctaatggatgtggggtggtatctcattgtggtttggatttgcatttccttatgattaatgatgttgagtatctttcatgctcactggccacttgtgtatcttctttggagaaatgtctatttaaatcctttgtccagttttaaattTGATGGACt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199728607 492 + 202140232 caacacttgc-----ttttttttctttttgagatggagtctcgctctgtcaccaggctggagtgcagtggcatgatctcagctcactgcgacctctgtctcctgggatcaagagattctcgtgcctcagcctcccgagtagctgggactacaggtgcctgccaccacacccagctaatttttgtatttttagtagagacagggtttcactatgctggccaggatggtctcaaactcctgaactcgtgatccacccttctcagtgttccacagtgctgtgattacaggtgtgagccactgcacccagccaacacttgctattttattttttatcttagccatcctaatggatgtgggatggtatctcattgtggtttggatttgcatttccttatgattaacgatgttgagtatctttcatgctcactggccacttgtatatcttcttttgagaaatgtttatttaaatcctttgtccagttttaaatttgattgACt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120817891 489 + 123690457 caacacttgc--------tttttttttttgagatggggtctcgcactgttgccaggctggagtgcagtggcgtgatctcagctcactgcgacctctgccttctgggttcaggagattctcgtgcctcagcctcccgagtagctgggactacaggtgcatgctgccacacctagctaatttttgtatttttagtagagacggggtttcactgtgctggccaggatggtctcaaactcctgaacttgtgatccacccgtctcagtgttccaaagtgctgtgattacaggtgtgagccaccgcacccagccaacacttgctattttattttttatcttagccatcctaatggatgtggggtggtatctcattgtggtttggatttgcatttccttattattaatgatgttgaatatctttcatgctcactggccacttgtatatcttctttggagaaatgtctatttaaatcctttgtccagttttaaatttgattgACt i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e canFam3.chr33 29035633 862 + 31377067 I e calJac3.chr17 868706 9054 - 74750902 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=513053.000000 s hg38.chr3_KI270935v1_alt 77966 632 + 197351 tatttttatttatttatttattttggaggcagagtcttgctctgttgcccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactataggtgcatgctaccaagcccagctaatttttgtgtttttagtagagac--gggtttcaccatgttggccaggctggtgttgaactcctggcctcaagtgatctgcctgccttggtctcccaaagtgctgggattacaggcatgagccaccgcacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtttgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtctaagcaccatttgttaaaTCTATCttttcttttcctttt-------tttttttttttttttttttttgagacagggtcttgctctgtcacccaggctgaagtgcgctggtgtgatcatggctcacttcagcttcctgcgtctgggctcaagtgat-ctcctgtctcagcctcctgggtagctgggactacaggcgtgcaccaccatacctggctaattttaatctt s panTro4.chr3_GL389630_random 40428 641 + 103936 tatttttatttacttattttttttggaggcagagtcttgctctgttgcccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcagttctcctgcctcagcctcctgagtagctgggactataggtgcatgctaccaagcccagctaatttttgtatttttagtcgagacaggggtttcaccatgttggccaggctggtcttgaactcctggcctcaagcgatctgccttccttggtctcccaaagtgttgggattacaggcatgagccaccacacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttcttttctttttctttttcttttctttttttttttattttgagacagggtcttgctctgtcacccaggctgaactgcactggtgtgatcatggctcacttcagtttcctgcttctgggctcaagtgat-ctcctatctcagcctccggggtagccgggactacaggcatgcaccaccatacctggctaattttaatctt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199729099 634 + 202140232 tatttttatttatttattttttttggagacagagtcttgctctgttgcccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcttgcctcagcctcctgagtagctgggaccataggtgcatgttaccgttcccagctaatttttgtatttttagtagagacagcagtttcaccatgtttgccaggctggtcttgaactcctggcctcaagtgatctgccttccttggtctcccaaagtgctgggattacaggcataagccaccacacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtccaagcaccatttgttaaaTCTGtcttttcttttcttttt-------ctttttcttttctttttttttgagacagggtcttgctctgtcacccaggctgaagtgcactggtgtgatcatggctcatttcagcttcctgcttctgggctcaagtgat-ctcctatctcagcctcctgggtagctgggactacaggcatgcaccaccatacctggctaatgttaatctt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120818380 631 + 123690457 tatttttatttatttatttattttggaggcagattcttgctctgctgcccaggctggagtgcagttgtgcaatcttggctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagcctcctgagtatctgggactataggtgcatgctaccatgcccagctaatttttgtatttttagtagggacaggggtttcaccatgtttgccaggctggtcttgaactcctggcctcaagtgatctgcctgcctcagtctcccaaagtgctgggattacaggcatgagccaccacacccagccagtttcagctcttacatttaggtctatggtccattttgagttaatatttgtatatggtgtgaggtaggagtccaaatgcattcttttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttcttttctttttctttt--tcttttcttttttttttttttgagacaggatcttgctctgtcatccaggctgaagtgcactggtatgaccatggctcacttcaacttcctgtttctgggctcaagtgat-ctcctatctcagcctcctgggtagccaggactacaggcacgcaccacca--------taattttaatctt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 877760 631 - 74750902 taccCCTGtttatttttatttttttgaaatagagtcttgctctgttgtccaggctggagtgcagttgtgcaatcttggctcacagcaaccttcacctcctgggttcaagcaattctcctgccttagcctcccaagtagctgggactgt-tgtgctcaccaccacgctcagctaatttttgtattattagtagagat-ggagttttaccatgttggccaggctggtcttgaactcctggcctcaagtgatctgcctgtctttgtctctcaaagtgttaagattacaggtgtgagccaccatgactggccagtttcagctcttacatttaggtctttggtacattttgagttaatatttgtatacggtgtgaggtaggggtccaaatgcattctcttgcatgtgcttatccagttgtccaagcaccatttgttaaatctatcttttcTtttctttct-------ttgtttctttttcttttttttgagacagggtcttgctctgtcacctaggctgaagtgcagtggtgtgatcatggctcatttcagcttccagcttctgggctcaagtgctcctcctacctcagccccctgggtagctgggactataggcatgtaccaccacacctggctaattttagtc-- i calJac3.chr17 I 9054 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e canFam3.chr33 29035633 862 + 31377067 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=546.000000 s hg38.chr3_KI270935v1_alt 78598 1 + 197351 t s panTro4.chr3_GL389630_random 41069 1 + 103936 t i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120819011 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29036495 1 + 31377067 T i canFam3.chr33 I 862 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e mm10.chr16 65400166 716 - 98207768 I e calJac3.chr17 878391 0 - 74750902 C e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I e ponAbe2.chr3 199729733 0 + 202140232 C a score=210180.000000 s hg38.chr3_KI270935v1_alt 78599 156 + 197351 t-----------ttTTTTTTTTTAATGTTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGAACCTTTGCTGTCTTGGGACGGATCACCGCTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGCACCAGACTGCCACCCAGACCACAGTGTCCTC s panTro4.chr3_GL389630_random 41070 167 + 103936 tttCTTTCTTTCTTTCTTTTTTTAACGTTCCTTTTTCTCCAGGCAGCTGTTCCCAACCCCAGAACCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTACCCAGACCACAGTGTCCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199729733 155 + 202140232 ------------ttttTTTTTTTAATGTTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGCAACTTTGCTATCTTAGAACGGATCACCAGTGAAAGAGGGGAAGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819012 165 + 123690457 tttttttttt--tttttttttttAACGTTCCTTTTTCTCCAGGCAGCTGCTCCCAACCCCAGCACCTTTGCCGTCTTGGAACGGATCACCACTGCAAGAGGGGAAGTTGCTACTGTGGTGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACCACAGTGTCCTC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 878391 155 - 74750902 ------------tatttttAAAAAATGTTCCTTGTTCTCCAGGCAGCTGCTCCCAACCCCAGCGCCTTTGCTGTCTTGGAACAGATCACCACTGCAAGAGGGGAGGTTGCTACTGTGATGAATTCTGCCATGTGGTACCAGACTGCTGCCCAGACTACAGTCTCCTC i calJac3.chr17 C 0 C 0 s mm10.chr16 65400882 156 - 98207768 -----------TCTGTCTTTTTAAATGTCTCCTCTCCTCCAGGCAGTTGTTCCCAGCCCCAGCCTCTCTGCTGCCCCGGAGAGGATTATGGCTGCAAGAGAGGAAACTGCTATTGTGATAAATTCTGCCGTGTGCTATCAGACTGCTGCCCAGACCACGAGACCCTC i mm10.chr16 I 716 C 0 s canFam3.chr33 29036496 152 + 31377067 -----------CTGTCTCTTTCTCATGTCCCTTCT-CTGCAGGCAGCTGCTCCCAACCCC-GCCCGTCTGCTGCCCCGGATCAGA-CACCATCGCAGGAGAGGAAGCTGCTG-TGTGACGAATCCTGCCACGTGGCATCACACTGCTGCCCAGGCCACCGTGCCCTC i canFam3.chr33 C 0 C 0 e rheMac3.chr2 6990 2564 - 192599291 I e chlSab2.chr15 364845 2237 - 91754291 I e macFas5.chr2 15656 2558 + 192460366 I e papAnu2.chr2 14410 2538 - 187378091 I a score=11997.000000 s hg38.chr3_KI270935v1_alt 78755 3 + 197351 TGC s panTro4.chr3_GL389630_random 41237 3 + 103936 TGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199729888 3 + 202140232 TGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819177 3 + 123690457 TGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 9554 3 - 192599291 tgC i rheMac3.chr2 I 2564 C 0 s macFas5.chr2 18214 3 + 192460366 tgC i macFas5.chr2 I 2558 C 0 s papAnu2.chr2 16948 3 - 187378091 tgc i papAnu2.chr2 I 2538 C 0 s calJac3.chr17 878546 3 - 74750902 TGC i calJac3.chr17 C 0 C 0 s mm10.chr16 65401038 3 - 98207768 TGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29036648 3 + 31377067 CGC i canFam3.chr33 C 0 C 0 e chlSab2.chr15 364845 2237 - 91754291 I a score=455784.000000 s hg38.chr3_KI270935v1_alt 78758 130 + 197351 AACCCTGGTAACTCACATACAGGCCCGATTCCACCTACAGCAAAGctggatgcgatggctggcagaggcaaaccctttgcctgcacttcaggccaaagccgggatgtggcctagatggttcctaaggtcc s panTro4.chr3_GL389630_random 41240 130 + 103936 AACCCTCGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCagaggcaaaccctttgcctgcacttcaggccaaagccgggatgtggcctagatggttcctaaggtcc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199729891 130 + 202140232 AACCCTGGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCAGAGGCAAGCCCCTTGCCTGCACTTCAGGCCAAAGCCgggatgtggcctagatggttcctaaggtcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819180 130 + 123690457 AACCCTGGTAACTCACATACAGGCCTGATTCCACCTACAGCAAAGCTGGATGCTATGGTTGGCAGAGGCAAGCCCTTTGCCTGCACTTCAGgccaaagccaggatgtggcctagatggttcctaaggtcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 9557 130 - 192599291 AACCCTGGTAACTCACACACAGGTCCGGTCCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCGTTTGCCTGCACCTCAGGCCAAAGCCgggatgcgacctagatggttcctaaggtcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 18217 130 + 192460366 AACCCTGGTAACTCACACACAGGTCCGGTCCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCGTTTGCCTGCACTTCAGGCCAAAGCCgggatgcgacctagatggttcctaaggtcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 16951 130 - 187378091 aacCCTGGTAACTCACACACAGGTCCGGTTCCACCCACAGCAAAGCTGGATGCTGTGGTTGGCAGAGCCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCGGGATGTGACCTAGATGGTTCCTAAGGTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367082 130 - 91754291 AACCCTGGTAACTCACACACAGGTCTGTTTCCACCCACGGCAAAGCTGGATGCTGTGGTTGGCAGAGGCAAGCCCTTTGCCTGCACTTCAGGCCAAAGCCgggatgtgacctagatggttcctaaggtcc i chlSab2.chr15 I 2237 C 0 s calJac3.chr17 878549 130 - 74750902 AACCCTGGTAACTCACATGTAGGCTTGTTTCCACCTACAGCAAAGCTGCATGCTGTGGTTGGCAGAGGCGAGCCCTTTGCCTGCATGTCAGGCCAAAGCTGGGACGTGCCCTGGATGGTTCCAAAGGCCC i calJac3.chr17 C 0 I 68 s mm10.chr16 65401041 118 - 98207768 AACTCCAGTGACCTGCATGCAGGCTCTCTTCCACCCGTGGCTCAGCTGGATGCTGTAACCCACAGAGGCAA-------GCCTGGACTTTAGATGGTGGCCGCTATGGAG--TGGGTGGCACC--ACATC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29036651 125 + 31377067 CACCCAGGTAA-TCACACGCCAGCTCCTTCCCACC--CGGCGGGGCTGGGTGCTGTGATGGACAGAGGCGGCCCGTCCAC--GCgcctcaggccaaggcccaggtgtggactggaaggccccggaggtgc i canFam3.chr33 C 0 C 0 a score=74967.000000 s hg38.chr3_KI270935v1_alt 78888 23 + 197351 ctgacaatcctg-agatcttg-CAT s panTro4.chr3_GL389630_random 41370 23 + 103936 ctgacaatcctg-agatcttg-CAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730021 23 + 202140232 ctgacagtcctg-agatcttT-CAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819310 23 + 123690457 ctgacaatcctg-agatcttg-CAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 9687 23 - 192599291 ctgacaatcctg-agatcttg-cat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 18347 23 + 192460366 ctgacaatcctg-agatcttg-cat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 17081 23 - 187378091 CTGACAATCCTG-AGATCTTG-CAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367212 23 - 91754291 ctgacaatcctg-agatcttg-CAT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65401159 24 - 98207768 CTGATGGTCCTGCAGTTCTTA-TAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29036776 24 + 31377067 ctgacaattctg-ggatcctgacat i canFam3.chr33 C 0 C 0 e calJac3.chr17 878679 68 - 74750902 I a score=1315818.000000 s hg38.chr3_KI270935v1_alt 78911 381 + 197351 CTTGTCTATT-----TCAGGTCAAAGGTGCCTACATGCTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGTTCAGCTGTCCGTGGTAGACATGAGGGTAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCATCTTGCAGTATGGATGTCTCTTGACTGGTACCGTGTAGACTTTTGAGGGCACACAGGAGTCTGCAGAG-AGATACTGGGGACATTGAGCAGCAGCAG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAACATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA s panTro4.chr3_GL389630_random 41393 381 + 103936 CTTGTCTATT-----TCAGGTCAAAGGTGCCTACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGTTCAGCTGTCCGTGGTAGACATGAGGGTAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCATCTTGCAGTATGGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCACACAGGAGTCTGCAGAG-AGATACTGGGGACATTGAGTAGCAGCGG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAACATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730044 381 + 202140232 CTTGTCTATT-----TCAGGTCAAAGGTGCCTACATGTTCCTTCTAGCTTTGTTTC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGTTCAGCTGTCCATGGTAGACATGAGGGTAGAGAATGAGATGGTTGGGTTCCACTTA----CCTTTCTATCATCTTGCAGTATGGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCAGAG-AGATACTGGGGATATTGAGCAGCAGCAA--TGGGGTTGGGAGGCAGAAATGAGGACAGGAACATTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCCGATGGTGTTGAGGACGGAGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819333 379 + 123690457 CTTCTCTATT-----TCAGGTCAAAGGTGCCTACATATTCCTTCTAGCTTT-TTTC-CCTGATGTTCTTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGTTCAGCTGTCCGTGGTAGACATGAGGGTAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCGTCTT-CAGTATGGATGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCAGAG-AGATACTGGGGATGCTGAGCAGCAGCAG--TGGGGTTGGGAGGCAGAAATGAGGACAGGAACGTTTACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGATGGTGCTGCAGATGGTGCTGAGGATGGAGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 9710 376 - 192599291 cctgtcTATT-----TCAGGTCAAAGGTGCCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTTCTTGCCA--CCTGCTACTCCTCTCTGAGCTGCTTTTCCAGGT-TCCACAG-----GGTTCAGCTGTCCGTGGTAGACATGAGGGCAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCTTCTTGCAGTATGGCTGTCTCTTGACTGGCACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGTGGAG-AGATGCTGGGGACGTTGAGCAACAGCAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAACGTTCACCTTGTATTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 18370 376 + 192460366 cctgtcTATT-----TCAGGTCAAAGGTGCCTACATATTCCTTCTAGCTTTGTTCC-CCTGATGTTTCTTGCCA--CCTGCTACTCCTCTCTGAGCTGCTTTTCCAGGT-TCCACAG-----GGTTCAGCTGTCCGTGGTAGACATGAGGGCAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCTTCTTGCAGTATGGCTGTCTCTTGACTGGCACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATGCTGGGGACGTTGAGCAACAGCAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAACGTTCACCTTGTATTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 17104 381 - 187378091 CCTGTCTCTT-----TCAGGTCAAAGGTGCCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGTTCAGCCTTCCGTGGTAGACATGAGGGCAGAGAATGAGGTGGTTGGTTTCCACTTA----CCTTTCTATCTTCTTGCAGTATGACTGTCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTGCGGAG-AGATACTGGGGACATTGAGCAACAGCAG--TGGGTGTGGGAGGCAGAAATGAGGACAAGAACATTCACCTTGTGTTTCCCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCAGAGGAAGGAGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367235 381 - 91754291 CCGGTCTATT-----TCAGGTCAAAGGTACCTACATGTTCCTTCTAGCTTTGTTCC-CCTGATGTTCCTTGCCA--CCTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGGGAGAGGGTCAGCTGTCCGTGGTAGACATGAGGGCAGAGAATGAGGTGGTTGGGTTCCACTTA----CCTTTCTATCTTCTTGCAGTATGGCCATCTCTTGACTGGTACCATGTAGACTTTTGAGGGCAGACAGGAGTCTTCGGAG-AGATACTGGGGACGCTGAGCAACAGCAG--TGGGGGTGGGAGGCAGAAATGAGGACAAGAACGTTCACCTTGTGTTTCTCTCAGCTTCTCAGATGACCAAGGTGGTGCTGCAGATGGTGCTGAGGAAGGAGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 878747 376 - 74750902 CTTGACAATCTGAGATCAGGTCAAAGGTG-CTACGCGT--CTTCTAGCTTTGTTT--CATGATG-TCCTTGCCA---CTGCTACTCCTCTCTGAGCTACTTTTCCAGGT-TCCACAGAGAGAGGTTAAGCTGTCTGTGGTAGAGAAGAG----GAGAAAGAGGTGGCTGGGGTCCACTTA----ACGTTCTCTCTTCTTGCAGTATGGATGCCTCTTGACTGGCAGCAGGTAGACTTTTGAGGGGAGACAGGAGTCTGCAGAG-AGATGCCGGGGATGCTGGGCAGCAGCAG--TGGGTGTGGGAGGCAGAAATGATGACAGGAGCCTTCACCTTGTGTTTCTTTCAGCTTCTCAGATGACCAAGATGGGGCTGCAGATGGTGCTGAGGATGGAGAA i calJac3.chr17 I 68 C 0 s mm10.chr16 65401183 340 - 98207768 TCTATGCATT-----TCACGCTCAAAACTTCTTCACGTTCCTCTCGACTCCCTT------------------CA--CCTGCTGCTCTCCCCCAAGCCTCTCTT-TAGGT-CCCACAGGGAGAGGCTGAGCTATCAGTGGTGAAAACCAGGCTAGGAAAGGTGGTGGGC--------CCAA----CCTTT------TCTTGCTCTATGTATGCCGCTTGGCC----TTGCTTGGAGATGTCAGAGCAG--AAGAGTCCTCAGAG-AGGTGTTGGGGATGTTGACCAGAAGTGGGCTGGGGGAGAGGAGCACGGATGAAGACAAG-GCCTTCACCCTGTGTT----CCAGCCTTTCACACTCCCAAGATGGTGCTACAGATGGTGCTGAGGACCGAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29036800 372 + 31377067 tttgtcCATT-----TCATGTCAAAAGTGCC--CACGTTCCTCCCAGCTTTGTCTCACCCCCCACCCCACCCCACCCCTGCTGCTCCCCTCTGAGCTACTTTCCCAGATGCCCACAGGGAGAGCTTAATCTGGTGGT--TGGGGATCAGGGTGGGGAGTGGGGCGATGGGGTTCCCCCCAACGGCCCTTCCATC-TCTTGAAATACAGATGCCTCTTGACCTGC-CCATGTAGACTTTCGAGGG---------GTTTGCAGAGTGGGAGCTGAGGAGGTTAGGCAGCCGGAG--GGGGCGTGGGAGCCCCGGGTGGGGACAGGAGCTGCCGCCTGGAGTTTC--TCAGCTTCTCAGA-ACCCCGGGTGGTGCCGCGGGTGGTGCTGAGGCCGCAGAA i canFam3.chr33 C 0 C 0 a score=7011.000000 s hg38.chr3_KI270935v1_alt 79292 4 + 197351 CCCA s panTro4.chr3_GL389630_random 41774 4 + 103936 CCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730425 4 + 202140232 CCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819712 4 + 123690457 GCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10086 4 - 192599291 CCCA i rheMac3.chr2 C 0 I 11 s papAnu2.chr2 17485 4 - 187378091 CCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367616 4 - 91754291 CCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879123 4 - 74750902 CCCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65401523 4 - 98207768 GCCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29037172 2 + 31377067 GC-- i canFam3.chr33 C 0 C 0 e macFas5.chr2 18746 0 + 192460366 C a score=168213.000000 s hg38.chr3_KI270935v1_alt 79296 80 + 197351 CCAAGCCCCGCTAGGAGCCACCTAGACTGGATGCAGAGCATGGTGAGCTCCCTGCAGGTTCTCTGAGAAGGGGTGGATGG s panTro4.chr3_GL389630_random 41778 80 + 103936 CCAAGCCCCGCTAGGAGCCACCTAGACTGGATGTAGAGCATGGTGAGCTCCCTGCAGGTTCTCTGAGAAGGGGTGGATGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730429 80 + 202140232 CCAAGCCCCGTTAGGAGCCACCTAGACTGGATGCAGAGCACAGTGAGCTCCCTGCAGGTTCTCTGAGAAGGGGTGGATGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819716 80 + 123690457 CTAAGCCCCGCTAGGAACCACCTAGACTGGATGCAGAGCACGGTAAGCTCCCGGCAGTTTCTCCAAGAAGGGGTGGATGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 17489 80 - 187378091 CCAAGCCCCGCTAGGAGCCACCTAGACCGGATGCAGAGCATGGTGAGCTCCCTGTAGGTTCTCTGAGAAGGGGTGGATGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367620 80 - 91754291 CCAAGCCCCGCTAGGAGCCACCTAGACCGGATGCAGAGCATGGTGAGCTCCCTGTAGGTTCCCCGAGAAGGGGTGGATGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879127 80 - 74750902 CCCAGCCCTGCTAGGAGCCGTCTAGACTGGGTGCAGAGCATGGTAAGCTCCCTGGAAGCTCTCCAAGAAGGGGTGGATGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65401527 69 - 98207768 CTCGACTCAGCCAGGAACAATCAAGATTTGGTACAAAACATGGTGAGTGCCCTG-----------AGCGGGGGTGGGGGG i mm10.chr16 C 0 I 1124 s canFam3.chr33 29037174 78 + 31377067 CCGCGCCCTGGGAGACGCCGTCTGGGCC-GACGCAGAGCGCGGGGAGGGCCCTAGACGGTCTCCCAGACGGGGCGGCGA- i canFam3.chr33 C 0 C 0 e rheMac3.chr2 10090 11 - 192599291 I e macFas5.chr2 18746 0 + 192460366 C a score=652615.000000 s hg38.chr3_KI270935v1_alt 79376 329 + 197351 CAGCCTGCTCCTTGCCTTTGTGCCCTCCAGGCCCCAAAGTCAGGGA------ACCAAAAGAAGAAAGGGGCCGTAGCTAGGGCAGAGCTCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCCGtctgtggacactgaaatttgaatctcatatacttt-----tgtgacaaaacattctt-cctcttttgttcttctcctaccatctaaaaa-----------------------------------tgtagaaaacattcttagcctatgagttgcac--aaaaacaggcagt-ggccagatttggcccatagaccatagtttgctgacttctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC s panTro4.chr3_GL389630_random 41858 334 + 103936 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAAAAGAAGAAAGGGGCCATAGCTAGGGCAGAGCTCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttttcatgtgtgacaaaacattatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtagaaaacattcttaacctatgagttgcac--aaaaacaggcagt-ggccagatttggcccatagaccatagtttgctgacttctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730509 333 + 202140232 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAAAGGGAGAAAGGGGCCGTAGCTAGGGCAGAGCTCCACTGCAATGATTGTTTCAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatagttttcatgtgtcacaaaactttatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtagaaaacattcttag-ctatgagttgcac--aaaaacaggcagt-ggccagatttggtccatagaccatagtttgctgacttctg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120819796 334 + 123690457 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAAAGGGAGAAAGGGGCCGTAGCTAGGGCCGAGCTCCACTGCAATGATTGTTTTAGGGGTAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaatctcatatacttttcatgtgtcacaaaacattatt-cttcttttgttcttctcctaccatctaaaaa-----------------------------------tgtagaaaacattcttagcctatgagttgcac--aaaaacaggcagt-ggccagatttggtccatagaccatagtttgctgacttttg------CCCTAAATCATCCTCCAT----TTCTTTCCTTCTGTGTCC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 17569 337 - 187378091 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAAAGGGAGAAAGGGGCTGTATCTAGGGCAGAGCTCCACTGCAATGATTGTTGTAGGGGTAGGAGCCAGGATTG--GTctgtggacactgaaatttgaatctCATATACttttcatgtgtcacaaaacattattccttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtagaaaacattcTTAGCCTATGAGTtgcac--aaaaacaggcagt-ggccagatttggcccatagaccgtagtttgctgacctctg------cccTAAGTCATCCtccattctcttctttccttccgtGTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 367700 339 - 91754291 CAGCCTGCTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAAAGGGAGAAAGGGGCTGTAGCTAGGGCAGAGCTCCACTGCAATGATTGTTTTAGGGGTAGGAACCAGGATTGCTGTCCGtggacactgaaatttgaatcgcatatacttttcatgtgtcacaaaacattatttcttcttttgttcttttcctaccatctaaaaa-----------------------------------tgtagaaaacattcttagcctatgagttgcac--aaaaacaggcagt-ggccagatttggcccatagaccgtagtttgctgacctctg------CCCTAAGTCATCCTCCATTCTCTTCTTTCCTTCTGTGTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879207 337 - 74750902 CAGCCTACTCCTTGCCTTTGTGGCCTCCAGACCCCAAAGTCAGGGA------ACCAGAGGGAGAAAGGGGCCTTCGCTATGGCAGAGCTCCACTGCAATGATGGTTTTAGGGATAGGAGCCAGGATTGCtgtctgtggacactgaaatttgaacctcatctacttttcatgtgtcacaaaacattatt-ctt-ttttgtttttctcctgccatctaacaa-----------------------------------cacagaaaacattcttagcctatgagtcgtac--agacacaggcagt-ggccagatttgccccatagactgtagtttgctgacctctg------CCATAGGTCATCCTCCATCCTCTTCTTTCCTTCTGTGTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29037252 374 + 31377067 CAAGCTGCCCCTACCCCC--TGGCCTCCAGCCCCCAAAGTCAGGGAATAACTACCAGTCAGGAAAAGAGACCCGAG-TGGGGCAGAGCCCTGCAGCAACCATGGTTTTAGGGCCCGGAGCCGTGGTTCCGGGCCGtggacactgacactgacattttatataattttcatgtgtcatgaaatattctt------ttgactttttttcaaccacttaaaagcgtgaaaagcattcttttttttttttttttttttttgtgaaaagcattcttaacttgtgatctggaccaaacaacctgcagcaagcccaatgcag-ccgcggattgtggtttgctgccctctgCGTCACCTCTAAATCGTCCTTCG-----TATTTCTCTTCTGTGCCC i canFam3.chr33 C 0 I 1 e rheMac3.chr2 10090 11 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e macFas5.chr2 18746 0 + 192460366 C a score=441467.000000 s hg38.chr3_KI270935v1_alt 79705 257 + 197351 Ttgttactgacaaagccactttccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgagcctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagcttggctcacaaatcaacttttctgctcgtgagac-ccaggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtggccaggtg-caatggctcact s panTro4.chr3_GL389630_random 42192 257 + 103936 Ttgttactgacaaagccactttccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccgaaagtgagcctcaagcagtacaggctttatttggtggccatggaattgagaagtgagagcttggctcacaaatcaacttttctgctcgtgagac-ccaggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtggccaggtg-caatggctcact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199730842 257 + 202140232 Ttgttactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccaaaagtgagcctcaagcagtgcaggctttatttgttggccacggaattgagaagtgagagcttggctcacaaatcaacttttctgctcatgagac-ccaggaagtcacagatacagggcatctttagtgaaggggctgagcattaaaagcaaggggaggagtGgccaggtg-caatagctcact i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120820130 257 + 123690457 Ttgttactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagccaatatgcaaaaccaaaagtgagcctcaagcagtgcaggctttatttggtggccatggaattgagaagtgagagcttggctcacaaatcaacttttctgctcatgagac-ccaggaagtcacagatatagggcatctttagtgaaggggctgagcattaaaagcaaagggaggagtggccaggtg-caatggctcact i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 17906 256 - 187378091 TTGTTACTGACAAAGCCACTTTCCCTAAAATGAGGTCTTTCCCTGTTTGGTGCCATGAAGCCAATATGCAAAACCCAAACTGAGCCTCAAGCAGTGCAGGCTTTATTTGGT-GCCATGGAATTGAGAAGTGAGAGCTTGGCTCACAAATCAACTTTTCTGCTCGTGAGAC-CCAGGAAGTCACAGATATAGGGCACCTTTAGTGAAGGGGCTGAGCATGAAAAGCAAGGGGAGGAGTggccaggag-caatggctcacT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368039 249 - 91754291 Ttgttactgacaaagccacttcccctaaaatggggtctttccctgtttggtgccatgaagc-------caaaaccaaaactgagcctcaagcagtgcaggctttatttggt-gccatggaattgagaagtgagagcttggctcacaaatcaacttttctgctcgtgaggc-ccaggaagtcacagatataggccacctttagtgaaggggctgagcatgaaaagcaaggggaggagtggccaggag-caaaggctcact i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879544 248 - 74750902 Ttgttactgacaaagccactccccctgaaatggggtctttccctgtttggtgccatgaagccaatatgtgaaacggaaagtgagggtcaagcagtacaggctttatttggtggccgtggaactgagaagtgagcgcttggctcgcaaatcaccatttctgcttgtgagactctgggaagtcgcagatataga-----------aagggggctgagcattaaaagcaagaggaggagtggccacgtgccaatggcttact i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10090 11 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037626 1 + 31377067 I e macFas5.chr2 18746 0 + 192460366 C a score=29025.000000 s hg38.chr3_KI270935v1_alt 79962 26 + 197351 cccataaacccagaa-ctttgggaggc s panTro4.chr3_GL389630_random 42449 26 + 103936 cccataaacccagaa-ctttgggaggc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731099 26 + 202140232 ctcataaacccagaa-cttcgggaggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120820387 26 + 123690457 cccataaacccagaa-cttcgggaggc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 18746 16 + 192460366 CCCATAAACCCAGAAc----------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18162 14 - 187378091 CCCAT-AACCCAGAA------------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368288 15 - 91754291 cccataaacccagaa------------ i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879792 26 - 74750902 cctataaacccagca-ctttgggaggc i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10090 11 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037626 1 + 31377067 I a score=1218365.000000 s hg38.chr3_KI270935v1_alt 79988 432 + 197351 caaaatgagaggattgc-tgagaccaggagttcgagaccatcctggtcaacatagtgatacacccccatctctacaaaaataaaaatgaaaaaagcaaggggaggaatcatgtgttttctgggtctgggtggagaaattttcaaaaccagagtgccaccttcctatttgtttttttatgt-tattttttcccatcattgtcatgttggttgttgactgttacggtgttagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaaatgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcacggaggtcatgtgggtattgcact-----ggatgacaTCTT s panTro4.chr3_GL389630_random 42475 432 + 103936 caaaatgagaggattgc-tgagaccaggagtttgagaccatcctggtcaacatagtgatacacccccatctctacaaaaataaaaatgaaaaaagcaaggagaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaccttcctatttgtttttttatgt-tttttttccccatcattgtcatgttggttgttgactgttaaggtgctagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaagtgagctgccatcttggattccatcactcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatatgcatggaggtcatgtgggtattgcact-----ggatgacaTCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731125 431 + 202140232 caaaatgagaggattgc-tgagaccaggagtttgagaccatcctggtcaatgtagtgatacccccctatctctacaaaaataaaaatGAAaagagcaaggggaggaatcgtgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaccttcctatttgtttttttatgt-t-ttttttcccatcattgtcatgttggttgttgactgttacagtgctagtgggactgtcatttaacatggaaattagattataatgaagttagaggtcaagtgagctgccatcttggattcgatcagtcttagctggtttgatcaccag----ggagaagtttggacttcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcacggaggtcatgtgggtattacact-----ggatgacaTCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120820413 430 + 123690457 caaaatgagaggattgc-taagaccaggagttcgagaccatcgtcgtcaacatagtgatacccccccatctctacaaaaataaaaatgaaaaaagcaaggggaggaatcctgtgttttccgggtctgtgtggagaacttttcaaaaccacagtgccaccttgctatttgtttttttatgg---ttttttctcatcattgtcatgttggttgttgactgttacggtgctagtgggactgtcatttagcatggaaattagatcataatgaagttagaggtcaagtgaggtgccatcttggattccatccgtcttagctggtttgatcaccag----ggagaagtttggacctcaggcatcctgcttcctaaagataaacagtgttaaggcagggtagatattcacggaggtcatgtgggtattacact-----ggatgacaTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10101 427 - 192599291 caagatgagaggattgc-cgagaccaggagttcgagaccatcctggttaacatagtgatac-tccccatctctacaaaactaaaaatGAAAAAAgtaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaactttctatttgtttttta-----tgtttttttccatcattgtcatggtggttgttgactgttatggtgctagcgggactaccatttagcatggaaattagattataacgaagttagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggtcatgtgggcattacact-----ggacgacaCCTT i rheMac3.chr2 I 11 C 0 s macFas5.chr2 18762 426 + 192460366 -aagatgagaggattgc-cgagaccaggagttcgagaccatcctggttaacatagtgatac-tccccatctctacaaaactaaaaatgaaaaaagtaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaactttctatttgtttttta-----tgtttttttccatcattgtcatggtggttgttgactgttatggtgctagcgggactaccatttagcatggaaattagattataacgaagttagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggtcatgtgggcattacact-----ggacgacaTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18176 429 - 187378091 CAAGATGAGAGGATTGC-CGagaccagaagttcgagaccatcctggttaacatagtgatac-tccccgtctctacaaaaacaaaaatgaaaaaagcaagggGAGGAATCATGTGTTTTCTGGGTCTGGGTGGAGAACTTTTCAAAACCAGAGTGCCAACTTcctatttgtttttta--gt-ttttttttttaatcattgtcATGGTGGTTGTTGACTGTTACAATGCTAGCGGGACTGTCATTTAGCATGGAAATTAGATTATAATGAAGTTAAAGGTCAAGTGAGCTGCCATCTTGGATTCCATCAGTCTTAGCTGGTTTGATCACCAG----GGAGAAGTTCGGACCTCAGGTATCCTGTTTCCTAAAGATAAACAGAGTTAAGGCAGGGTAGGTATTCACGGAGGTCATGTGGGCATTACACT-----GGATGACATCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368303 429 - 91754291 caagatgagaggattgc-cgagaccaggagttcgagaccgtcctggttaacatggtgatac-tccccatctctacaaaaCTAAAAATGAAaagagcaaggggaggaatcatgtgttttctgggtctgggtggagaacttttcaaaaccagagtgccaacttcctatttgtttttta--tg-ttttttttcccatcattgtcatggtagttgttgactgttatggtgctagcgggactgctatttagcatggaaattagattataaggaagctagaggtcaagtgagctgccatcttggattccatcagtcttagctggtttgatcaccag----ggagaagttcggacctcaggcatcctgtttcctaaagataaacagagttaaggcagggtaggtattcacggaggttatgtgggcattacact-----ggatgacaTCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 879818 419 - 74750902 caagatgagaggattgcttgagaccaggagttcgagaccagcctggtcaacgtaatgagac--cctcatctctacaaaaataaaaatAAaaaaagcaaagggaggaat--tgtgttttctgggtctgggtggagaagttttccaaacc-gagtgccactttcctatctgtttttttatgtttttttccccccagcattgtcacggtgcttgattactgttatggtgccagtggaagtgtgatttagcatggaaattagattataatgaagttagaggtcaggtgagctgccatcttggattccaccagtcttagctggtttgatcaccagctaaggagaggttctgacctcaggcatcctgtttcctaa-------------------agggtagatattcaccaaggtcatgtaggcattacattacacgggataacaTCTT i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037626 1 + 31377067 I a score=811273.000000 s hg38.chr3_KI270935v1_alt 80420 253 + 197351 GGCTTCAGCCCTGATCTGTTCAGAGCCCTCAGCACGGTACTGGAGGAGAGGCCTTGGGCCGCATCGTGGCATATTGTG-GCTTTGGGGAGAAagaaaagcag-atagtgcaatggaaagagcgtggacttgagagtc---a----gacttgacttcaactcctagctctaccacttaccacctaggtgacctcaag--ccactttctcagcctttctgagactctgtatcctcatgtgtatcctagagtttgtctgatagggct s panTro4.chr3_GL389630_random 42907 253 + 103936 GGCTTCAGCCCTGATCTGTTCAGAGCCCTCAGCACGGTGCTGGAGGAGAGGCCTTGGGCCACATCGTGGCATATTGTG-GCTTTGGGGAGAAagaaaagcag-atactgcaatggaaagagcgtgcacttgagagtc---a----tacatgacttcaactcctagctctaccacttaccacctaggtgacctcaag--ccactttctcagcctttctgagactctgtttcctcatgtgtatcctagagtttctctgatagggct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731556 253 + 202140232 GGCTTCAGCCCTGATCTCTTCAGAGCCCTCAGCACAGTACTGGAGGAGAGTCCTTGGGCTGCATCATGGCATATTGTG-GCTTTGGGGAGAAagaaaagcag-atagtgcaatggaaagagcgtggacttgagagtc---a----gacttgacttcaactcctagctctaccactcaccacctaggtgacctcaag--ccactttctcagcctttctcagactctgtttcctcatgcgtatcctagagtttgtctgatagggct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120820843 253 + 123690457 GGCTTCAGCCCTGATCTGTTCCGAGCCCTCAGCACAGTACTGGAGGAGAGGCCTTGGGCTGCATTGTGGCATATTGTG-GCTTTGGGGAGAAagaaaagcag-atagtgcaatgaaaagagcgtgggcttcagagtc---a----gacttgacttcaactcctagctctaccacttaccacctaggtgacctcaag--ccactttctcagcctttctgagcctctgtttcctcatatgtatcctagagtttgtctgatagggct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10528 252 - 192599291 GGCTTTAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGAG-CCCTGAGCCACATCATGGCATATTGTG-GCTTTGGGCAGAAagaaaagcgg-atagtgcaatggaaagagcatgggcttgagagtc---a----gacttgacttcaactcctagctccaccacttaccacctaggtgacctcaag--ccactttctcagtctttctgagcctccatttcctcatgtgtgtcctagagcttgtctgatagggct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19188 252 + 192460366 GGCTTTAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGAG-CCCTGAGCCACATCATGGCATATTGTG-GCTTTGGGCAGAAagaaaagcgg-atagtgcaatggaaagagcatgggcttgagagtc---a----gacttgacttcaactcctagctccaccacttaccacctaggtgacctcaag--ccactttctcagtctttctgagcctccatttcctcatgtgtgtcctagagcttgtctgatagggct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18605 252 - 187378091 GGCTTCAGCCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGAGAG-CCCTGGGCTGCATCATGGCATACTGTG-GCTTTGggcagaaagaaaagcag-atagTGCGATGGAAAGAGCATGGGCTTGAGAGTC---A----GACTTGACTTCAACTCCTAGCTCTACCACTTACCACCTAGGTGACCTCAAG--CCACTTTCTCAGTctttctgagcctccatttcctcatgtgTATCCTAGAGCTTGTCTGATAGGGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368732 252 - 91754291 GGCTTCAGTCCTGATCTGTCCAGTGCCCTCAACCCAGTACTGGAGGGGAG-CCCTGGGCTGCATCGTGGCATATTGTG-GCTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagcatgggcttgagagtc---a----gacttgacttcaattcctagctctaccacttaccacctaggtgacctcaag--ccactttctcagtctttctgagcctccatttcctcatgtgtatcctagagcttgtctgatagggct i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880237 253 - 74750902 GGCCTCAA----GATCTGTCCAGAGCCCTCTGCCCAGCACTGGAGGAGAGGCCTTGGCCCACATCCTGGCATATTATG-ACTTTGGGCAGAAagaaaagcag-atagtgcaatggaaagagggtgggcttgatagtc---agatggacttgagttcaactcctagctctaccgcttactgcctgggtgacctcaag--ccactttctcagcctttctgagcctcagtttcctcatgtgtctcctagagcttgcctgataggggc i calJac3.chr17 C 0 C 0 s canFam3.chr33 29037627 244 + 31377067 GGCTTCAGCCCTGGCTTGTCCAGAGCTCTCTGCCCGGCACTGGAACGGAGGCCTCAGCCTCCACTT-----TATTGTGAACATGGGGCAGAAagaaaggcaacgtgggacaatggaaggagcatggacttgggagccgaaa----gttctgggtccagatcccacctctaccacgtgttacctggaggaactgacgtacctccttctc-----------gcttccctttccccatctgtgtcctagagcttgccttgcagagct i canFam3.chr33 I 1 I 32 e mm10.chr16 65401596 1124 - 98207768 I a score=12389.000000 s hg38.chr3_KI270935v1_alt 80673 5 + 197351 atagt s panTro4.chr3_GL389630_random 43160 5 + 103936 gtagt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731809 5 + 202140232 atagt i ponAbe2.chr3 C 0 I 35 s nomLeu3.chr11 120821096 5 + 123690457 atagt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10780 5 - 192599291 acagt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19440 5 + 192460366 acagt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18857 5 - 187378091 ATAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368984 5 - 91754291 atagt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880490 5 - 74750902 atagg i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I a score=16132.000000 s hg38.chr3_KI270935v1_alt 80678 8 + 197351 gagaatta s panTro4.chr3_GL389630_random 43165 8 + 103936 gagaatta i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821101 8 + 123690457 gagaatta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10785 8 - 192599291 gagactta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19445 8 + 192460366 gagactta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18862 8 - 187378091 GAGAATTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368989 8 - 91754291 gagactta i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880495 8 - 74750902 gaggattg i calJac3.chr17 C 0 I 7 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=10191.000000 s hg38.chr3_KI270935v1_alt 80686 6 + 197351 attgaa s panTro4.chr3_GL389630_random 43173 6 + 103936 gttgaa i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821109 6 + 123690457 attgaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10793 6 - 192599291 attgaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19453 6 + 192460366 attgaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18870 6 - 187378091 ATTGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 368997 6 - 91754291 attgaa i chlSab2.chr15 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880503 7 - 74750902 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=43932.000000 s hg38.chr3_KI270935v1_alt 80692 23 + 197351 ttaaGTATAGTGAGAATTAAGCC s panTro4.chr3_GL389630_random 43179 23 + 103936 ttaagtatagtgagaattaagcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821115 23 + 123690457 ttaaGTATAGTGAGAATTAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 10799 23 - 192599291 ttaaGTATAGTGAGAATTAAGCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19459 23 + 192460366 ttaaGTATAGTGAGAATTAAGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18876 22 - 187378091 -TAAGTATAGTAAGAATTAAGCC i papAnu2.chr2 C 0 I 23 s chlSab2.chr15 369003 23 - 91754291 ttaaGTATAGTGAGAATTAAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880510 14 - 74750902 tcaggcatagagag--------- i calJac3.chr17 I 7 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=11831.000000 s hg38.chr3_KI270935v1_alt 80715 13 + 197351 AGGTCTGGAGAGG s panTro4.chr3_GL389630_random 43202 13 + 103936 aggtctggAGAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821138 13 + 123690457 AGGTCTGGAGAGG i nomLeu3.chr11 C 0 T 28 s rheMac3.chr2 10822 13 - 192599291 AGGTATGGAGAGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19482 13 + 192460366 AGGTATGGAGAGA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 369026 13 - 91754291 AAGTATGGAGAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880524 2 - 74750902 ------gg----- i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e papAnu2.chr2 18898 23 - 187378091 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=4365.000000 s hg38.chr3_KI270935v1_alt 80728 3 + 197351 CCT s panTro4.chr3_GL389630_random 43215 3 + 103936 CCT i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chr2 10835 3 - 192599291 CCT i rheMac3.chr2 C 0 I 231 s macFas5.chr2 19495 3 + 192460366 CCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 369039 3 - 91754291 CCT i chlSab2.chr15 C 0 I 18 s calJac3.chr17 880526 3 - 74750902 cct i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e papAnu2.chr2 18898 23 - 187378091 I e ponAbe2.chr3 199731814 35 + 202140232 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=2759.000000 s hg38.chr3_KI270935v1_alt 80731 8 + 197351 GGCTACTG s panTro4.chr3_GL389630_random 43218 8 + 103936 GGCTACTG i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 19498 8 + 192460366 AGGTCCTG i macFas5.chr2 C 0 C 0 s calJac3.chr17 880529 8 - 74750902 ggcTCCTG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369042 18 - 91754291 I e papAnu2.chr2 18898 23 - 187378091 I e ponAbe2.chr3 199731814 35 + 202140232 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=1534.000000 s hg38.chr3_KI270935v1_alt 80739 3 + 197351 GTG s panTro4.chr3_GL389630_random 43226 3 + 103936 GTG i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 19506 2 + 192460366 -TG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18921 3 - 187378091 GTG i papAnu2.chr2 I 23 C 0 s calJac3.chr17 880537 3 - 74750902 GTT i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I e nomLeu3.chr11 120821151 28 + 123690457 T a score=107811.000000 s hg38.chr3_KI270935v1_alt 80742 139 + 197351 --------------AGTGAGGTAACTGAGATCAGGTATGGAGA-GGACTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATGAGGTATGGAG-GGACCTGTCTCCTGGTGACT--------------GAGTTAATTGAGATGAGGTGTGGAG-GGACCTGGCTCCTGGTGAGTG-------------- s panTro4.chr3_GL389630_random 43229 139 + 103936 --------------AGTGAGGTAACTGAGATCAGGTATGGAGA-GGCCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATCCATTATGGAG-GGACCTGTCTCCTGGTGAGT--------------GAGTTAATTGAGATCCGGTATGGAG-GGACCTGGATCCTGGTGAGTG-------------- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821123 136 + 123690457 --------------AGTGAG--AATTAAG-CCAGGTCTGGAGA-GGCCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTAAGT--------------GAATAAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGGGAGTG-------------- i nomLeu3.chr11 T 28 C 0 s macFas5.chr2 19508 137 + 192460366 --------------AGTGAATTAATTGAGATCAGGTAGGGAGG-GACGTGGCTCCTGGTCAGT--------------GAATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCT-GTGGGT--------------GAATTAATTGAGATCAGGTGGCGAG-GGACGTGGCTCCT-GTGGGTG-------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18924 137 - 187378091 --------------AGTGAATTAACTGAGATCAGGTGGGGAGG-GGCGTGGCTTCT-GTCCGT--------------GAATTAATTGAGATCAGGTAGGGAG-GGACGCGGCTCCT-GTGAAT--------------GAATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCTGGTGAGTG-------------- i papAnu2.chr2 C 0 T 45 s calJac3.chr17 880540 198 - 74750902 AGTGGCCCCACGAGGGAGGATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTGGCCCCACAAGGGAGGATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTGGCCCCACAAGGGAGGATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGCGGCCCCACGAGGGAG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=40983.000000 s hg38.chr3_KI270935v1_alt 80881 44 + 197351 AGTTAATTGAGATCCATTAGGGAG-GGACCTGGCTCCTGGCGAGT s panTro4.chr3_GL389630_random 43368 44 + 103936 AGTTAATTGAGATCAGGTATGGAG-GGACCTGGCTCCTGGTAAGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821259 44 + 123690457 AGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 175 s macFas5.chr2 19645 43 + 192460366 AATTAATTGAGATCAGGTAGGGAG-AGACGTGGCTCCT-ATGGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19016 44 - 187378091 AATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCTGGTGAGT i papAnu2.chr2 T 45 C 0 s calJac3.chr17 880738 45 - 74750902 GATTGATTGAGATCAGACGTGGAGAGGGCCTGGCTCCTGGTGACT i calJac3.chr17 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=1500.000000 s hg38.chr3_KI270935v1_alt 80925 1 + 197351 G s panTro4.chr3_GL389630_random 43412 1 + 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821128 1 + 123690457 G i nomLeu3.chr11 T 175 C 0 s macFas5.chr2 19688 1 + 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19060 1 - 187378091 G i papAnu2.chr2 C 0 T 165 s calJac3.chr17 880783 1 - 74750902 G i calJac3.chr17 C 0 T 281 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=1932.000000 s hg38.chr3_KI270935v1_alt 80926 12 + 197351 AGTTAATTGACA s panTro4.chr3_GL389630_random 43413 12 + 103936 AGTTAACTGATA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821129 7 + 123690457 AATTAA-----G i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 19689 12 + 192460366 AATTAATTGAGA i macFas5.chr2 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e papAnu2.chr2 19061 165 - 187378091 T e ponAbe2.chr3 199731814 35 + 202140232 I a score=20067.000000 s hg38.chr3_KI270935v1_alt 80938 37 + 197351 CCCGGTATGGAGGGACCTGGCTCCTGGCGAGTGATTT s panTro4.chr3_GL389630_random 43425 37 + 103936 TCCATTATGGAGGGACCTGGCTCCTGGTGAGTGAGTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821136 37 + 123690457 CCAGGTCTGGAGAGGCCTGGCTCCTGGTGAGTGAGTT i nomLeu3.chr11 C 0 T 44 s macFas5.chr2 19701 36 + 192460366 TCAGGTGGCGAGGGACGTGGCTCCT-GTGGGTGAATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18896 36 - 187378091 CCAGGTATGGAGAGACCTAGGTCCT-GTGAGTGAATT i papAnu2.chr2 T 165 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=31403.000000 s hg38.chr3_KI270935v1_alt 80975 55 + 197351 AATTGAGACCCGGTGTGGAGGGACTTGGCTCCTGGTGAGTGAGTGAATTGAGATG s panTro4.chr3_GL389630_random 43462 55 + 103936 AATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGGGAGTGAGTTAACTGAGATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821129 54 + 123690457 AATTAAG-CCAGGTCTGGAGAGGCCTGGCTCCTGGTGAGTGAGTTAATTGAGATG i nomLeu3.chr11 T 44 C 0 s macFas5.chr2 19737 54 + 192460366 AATTGAGATCAGGTAGGGAGAGACGTGGCTCCT-ATGGGTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18932 54 - 187378091 AACTGAGATCAGGTGGGGAGGGGCGTGGCTTCT-GTCCGTGAATTAATTGAGATC i papAnu2.chr2 C 0 T 88 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=71977.000000 s hg38.chr3_KI270935v1_alt 81030 117 + 197351 AGGTATGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATGAGGTGTGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATGAGGTGTGGAGGGACCCGGCTCCTGGTG s panTro4.chr3_GL389630_random 43517 117 + 103936 CCTTATGGAGGGACCTGGCTCCTGGTGACTGAGTTAATTGAGATGAGGTGTGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGACCCGGTATGGAGGGACCTGGATCCTGGTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821183 117 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGGGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTTCTGGTG i nomLeu3.chr11 C 0 T 177 s macFas5.chr2 19791 115 + 192460366 AGGTGGGGAGGGATGTGGCTCCTGGTGAGTGAATTAATTGAGATCAGGTAAGGAGAGACGTGGCTCCT-GTGGGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCT-CTGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18898 114 - 187378091 AGGTATGGAGAGACCTAGGTCCT-GTGAGTGAATTAACTGAGATCAGGTGGGGAGGGGCGTGGCTTCT-GTCCGTGAATTAATTGAGATCAGGTAGGGAGGGACGCGGCT-CCTGTG i papAnu2.chr2 T 88 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=30379.000000 s hg38.chr3_KI270935v1_alt 81147 49 + 197351 AGTGAGTTAATTGAGACTCGGTGTGGAGGGACTTGGCTCCTGGTGAGTG s panTro4.chr3_GL389630_random 43634 49 + 103936 AGTGAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGTGAGTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821123 46 + 123690457 AGTGAG--AATTAAG-CCAGGTCTGGAGAGGCCTGGCTCCTGGTGAGTG i nomLeu3.chr11 T 177 C 0 s macFas5.chr2 19906 48 + 192460366 AGTGAATTAATTGAGATCAGGTAGGGAGAGACGTGGCTCCT-GTGGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19012 49 - 187378091 AATGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCTGGTGAGTG i papAnu2.chr2 C 0 T 163 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=1230.000000 s hg38.chr3_KI270935v1_alt 81196 4 + 197351 AGTG s panTro4.chr3_GL389630_random 43683 4 + 103936 AGTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821169 4 + 123690457 AGTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 19954 4 + 192460366 AATT i macFas5.chr2 C 0 C 0 e rheMac3.chr2 10838 231 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e papAnu2.chr2 19061 163 - 187378091 T e ponAbe2.chr3 199731814 35 + 202140232 I a score=8020.000000 s hg38.chr3_KI270935v1_alt 81200 10 + 197351 AATTGAGATG s panTro4.chr3_GL389630_random 43687 10 + 103936 AATTGAGATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821173 10 + 123690457 AATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11069 10 - 192599291 AATTGAGATC i rheMac3.chr2 I 231 C 0 s macFas5.chr2 19958 10 + 192460366 AATTGAGATC i macFas5.chr2 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e papAnu2.chr2 19061 163 - 187378091 T e ponAbe2.chr3 199731814 35 + 202140232 I a score=43838.000000 s hg38.chr3_KI270935v1_alt 81210 45 + 197351 AGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTGAATTGAGATG s panTro4.chr3_GL389630_random 43697 45 + 103936 AGGTATGGAGGGACCTGGCTCCTGGTAAGTGAGTTAACTGATATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821183 45 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11079 44 - 192599291 AGGTGGGGAGAGACGTGGCTCCT-GTGGGTGAATTAATTGAGATC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 19968 45 + 192460366 AGGTAGGGAGGGACGTGGCTCCTGGTGAGTTAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18898 44 - 187378091 AGGTATGGAGAGACCTAGGTCCT-GTGAGTGAATTAACTGAGATC i papAnu2.chr2 T 163 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e ponAbe2.chr3 199731814 35 + 202140232 I a score=91264.000000 s hg38.chr3_KI270935v1_alt 81255 75 + 197351 AGGTGTGGAGGGACCTGTCTCCTGGTGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGTCTCCTGGTGAGT s panTro4.chr3_GL389630_random 43742 75 + 103936 CATTATGGAGGGACCTGGCTCCTGGTGAGTGAGTGAATTGAGATCAGGTATAGAGGGACCTGGCTCCTGGTGAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731849 75 + 202140232 aggtctggaggggcctggctcctggtgagtgAGTTAGTTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAGT i ponAbe2.chr3 I 35 C 0 s nomLeu3.chr11 120821228 75 + 123690457 AGGTATGGAGGGACCTGGCTCCTGGGGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 200 s rheMac3.chr2 11123 69 - 192599291 AGGTGGCGAGGGACGTGGCTCCT-----GTGAATTAATTGAGATCAGGTGGGGAGAGACGTGGCTCCT-GTGGGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20013 69 + 192460366 AGGTAGGGAGGGACGTGGGTCCT-----GTGAATTAATTGAGATCAGGTTGGGAGGGACGTGGGTCCT-GTGGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18942 73 - 187378091 AGGTGGGGAGGGGCGTGGCTTCT-GTCCGTGAATTAATTGAGATCAGGTAGGGAGGGACGCGGCTCCT-GTGAAT i papAnu2.chr2 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I a score=53422.000000 s hg38.chr3_KI270935v1_alt 81330 46 + 197351 GAGTTAATTGAGATCAGGTATGGAGGGACTTGGCTCCTGGTGAGTG s panTro4.chr3_GL389630_random 43817 46 + 103936 GAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGTAAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731924 46 + 202140232 GAGTTAATTGAGATCCGGTATGGAGGGACCTGGCTCCTGGTGAGTG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11192 46 - 192599291 GAATTAATTGAGATCAGGTGGGGAGGGACGTGGCTCCTGGTGAGTG i rheMac3.chr2 C 0 I 174 s macFas5.chr2 20082 45 + 192460366 GAATTAATTGAGATCAGGTAGGGAGAGACGTGGGTCCT-GTGGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19015 46 - 187378091 GAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCTGGTGAGTG i papAnu2.chr2 C 0 T 161 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821303 200 + 123690457 T a score=4982.000000 s hg38.chr3_KI270935v1_alt 81376 16 + 197351 AGTTAATTGAGACTCT s panTro4.chr3_GL389630_random 43863 16 + 103936 AGTTAACTGATATCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731970 16 + 202140232 AATTAATTGAGATCAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 20127 16 + 192460366 AATTAATTGAGATCAG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 11238 174 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e papAnu2.chr2 19061 161 - 187378091 T e nomLeu3.chr11 120821303 200 + 123690457 T a score=15312.000000 s hg38.chr3_KI270935v1_alt 81392 25 + 197351 GTGTGGAGGGACCTGGCTCCTGGTG s panTro4.chr3_GL389630_random 43879 25 + 103936 TTATGGAGGGACCTGTCTCCTGGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199731986 25 + 202140232 ATGTGGAGGGACCTAGCTCCTGGTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 20143 25 + 192460366 GTGGGGAGGGACGTGGCTCCTGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18900 24 - 187378091 GTATGGAGAGACCTAGGTCCT-GTG i papAnu2.chr2 T 161 C 0 e rheMac3.chr2 11238 174 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821303 200 + 123690457 T a score=20694.000000 s hg38.chr3_KI270935v1_alt 81417 18 + 197351 AGTGAGTTAATTGAGATG s panTro4.chr3_GL389630_random 43904 18 + 103936 AGTGAGTTAATTGAGATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732011 18 + 202140232 AGTGAGATAATTGAGATG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11412 18 - 192599291 AGTGAATTAATTGAGATC i rheMac3.chr2 I 174 C 0 s macFas5.chr2 20168 18 + 192460366 AGTGAATTAATTGAGATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18924 18 - 187378091 AGTGAATTAACTGAGATC i papAnu2.chr2 C 0 T 44 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821303 200 + 123690457 T a score=30375.000000 s hg38.chr3_KI270935v1_alt 81435 30 + 197351 AGGTATGGAGGGACCTGGCTCCTGGTGAGT s panTro4.chr3_GL389630_random 43922 30 + 103936 CGGTATGGAGGGACCTGGATCCTGGTGAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732029 30 + 202140232 AGGTATGGAGGGACCTGGCTCCTGGTGAGT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11430 30 - 192599291 AGGTAGGGAGGGACGTGGCTCCTGGTGAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20186 29 + 192460366 AGGTAGGGAGAGACGTGGCTCCT-GTGGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18898 29 - 187378091 AGGTATGGAGAGACCTAGGTCCT-GTGAGT i papAnu2.chr2 T 44 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I e nomLeu3.chr11 120821303 200 + 123690457 T a score=20061.000000 s hg38.chr3_KI270935v1_alt 81465 13 + 197351 GAGTTAATTGAGA s panTro4.chr3_GL389630_random 43952 13 + 103936 GAGTTAATTGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732059 13 + 202140232 GAGTTAATTGAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821103 12 + 123690457 gaattaattga-a i nomLeu3.chr11 T 200 C 0 s rheMac3.chr2 11460 13 - 192599291 GAATTAATTGAGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20215 13 + 192460366 GAATTAATTGAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18927 13 - 187378091 GAATTAACTGAGA i papAnu2.chr2 C 0 T 44 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I a score=17487.000000 s hg38.chr3_KI270935v1_alt 81478 28 + 197351 TCAGGTATGGAGGGACCTGGCTCCTGGT s panTro4.chr3_GL389630_random 43965 28 + 103936 TCAGGTATGGAGGGACCTGGCTCCTGGT i panTro4.chr3_GL389630_random C 0 T 450 s ponAbe2.chr3 199732072 28 + 202140232 TCCAGTATGAAGGGACCTGGCTCCTGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821115 8 + 123690457 ttaaGTAT-------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11473 25 - 192599291 TCAGGTAGGGAGGGACGTGGGTCCT--- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20228 27 + 192460366 TCAGGTAGGGAGGGACGTGGCTCTGGT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18896 27 - 187378091 CCAGGTATGGAGAGACCTAGGTCCTGT- i papAnu2.chr2 T 44 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I a score=184596.000000 s hg38.chr3_KI270935v1_alt 81506 140 + 197351 GAGTGAGTTAATTGAGATGAGGTGTGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTG---------------------------------------GTGAGTG s panTro4.chr3_GL389630_random 43543 140 + 103936 GACTGAGTTAATTGAGATGAGGTGTGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGACCCGGTATGGAGGGACCTGGATCCTGGTGAGTGAGTTAATTGAGATCAGGTATGGAGGGACCTGGCTCCTG---------------------------------------GTGAGTG i panTro4.chr3_GL389630_random T 450 C 0 s ponAbe2.chr3 199732100 140 + 202140232 GAGTGAATTAATTGAGATCAGATATGGAGGGACCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAGTGAGTTAACTGAGATAAGTTATGGAGCGACCTGGCTCCTG---------------------------------------GTGAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821123 136 + 123690457 -AGTGAG--AATTAAG-CCAGGTCTGGAGAGGCCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTAAGTGAATAAATTGAGATGAGGTATGGAGGGACCTGGCTCCTG---------------------------------------GGGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11498 136 - 192599291 --GTGAATTAATTGAGATCAGGTTGGGAGGGAAGTGGGTCCT-GTGGGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCT-GTCAGTGAATTAATTGAGATCAGGTGGGGAGGGACGTGGCTCCTG---------------------------------------GTGAGTG i rheMac3.chr2 C 0 T 133 s macFas5.chr2 20255 173 + 192460366 GAGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCT-GTCAGTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGGTCCT-----GTGAATTAATTGAGATCAGGTAGGGAGGGACGTGGGTCCTGTGAATTAATTGAGATCAGGTTGGGAGGGACGTGGGTCCTGTGGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18923 138 - 187378091 GAGTGAATTAACTGAGATCAGGTGGGGAGGGGCGTGGCTTCT-GTCCGTGAATTAATTGAGATCAGGTAGGGAGGGACGCGGCTCCT-GTGAATGAATTAATTGAGATCAGGTAGGGAGGGACGTGGCTCCTG---------------------------------------GTGAGTG i papAnu2.chr2 C 0 T 89 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I a score=8118.000000 s hg38.chr3_KI270935v1_alt 81646 5 + 197351 AGTTA s panTro4.chr3_GL389630_random 43683 5 + 103936 AGTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732240 5 + 202140232 AATTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821259 5 + 123690457 AGTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11501 5 - 192599291 AATTA i rheMac3.chr2 T 133 C 0 s macFas5.chr2 20428 5 + 192460366 AATTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18972 5 - 187378091 AATTA i papAnu2.chr2 T 89 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T e chlSab2.chr15 369042 18 - 91754291 I a score=71777.000000 s hg38.chr3_KI270935v1_alt 81651 39 + 197351 ATTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAGT s panTro4.chr3_GL389630_random 43688 39 + 103936 ATTGAGATCAGGTATGGAGGGACCTGGCTCCTGGTAAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732245 39 + 202140232 ACTGAGATGAGGTATGGAGGGACCTGGCTCCTGGTGAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821264 39 + 123690457 ATTGAGATGAGGTATGGAGGGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 45 s rheMac3.chr2 11506 38 - 192599291 ATTGAGATCAGGTTGGGAGGGAAGTGGGTCCT-GTGGGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20433 38 + 192460366 ATTGAGATCAGGTAGGGAGGGACGTGGCTCCT-GTCAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18977 38 - 187378091 ATTGAGATCAGGTAGGGAGGGACGCGGCTCCT-GTGAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 369060 38 - 91754291 ATTGAGATCAGGTAGGGAGGGGCGTGGCTCCG-GTGAGT i chlSab2.chr15 I 18 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T a score=11191.000000 s hg38.chr3_KI270935v1_alt 81690 6 + 197351 GAGTGA s panTro4.chr3_GL389630_random 43727 6 + 103936 GAGTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732284 6 + 202140232 GAGTTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821258 6 + 123690457 GAGTTA i nomLeu3.chr11 T 45 C 0 s rheMac3.chr2 11544 6 - 192599291 GAATTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20471 6 + 192460366 GAATTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19015 6 - 187378091 GAATTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 369098 6 - 91754291 GAATGA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880784 281 - 74750902 T a score=26301.000000 s hg38.chr3_KI270935v1_alt 81696 11 + 197351 ATTGAGATCAG s panTro4.chr3_GL389630_random 43733 11 + 103936 ACTGATATCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732290 11 + 202140232 ATTGAGATGAG i ponAbe2.chr3 C 0 T 107 s nomLeu3.chr11 120821264 11 + 123690457 ATTGAGATGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11550 11 - 192599291 ATTGAGATCAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20477 11 + 192460366 ATTGAGATCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19021 11 - 187378091 ATTGAGATCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 369104 11 - 91754291 ATTGAGATCGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880503 11 - 74750902 attgagctcag i calJac3.chr17 T 281 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I a score=48225.000000 s hg38.chr3_KI270935v1_alt 81707 28 + 197351 GTATGGAG-GGACTTGGCTCCTGGTGAGT s panTro4.chr3_GL389630_random 43744 28 + 103936 TTATGGAG-GGACCTGGCTCCTGGTGAGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821275 28 + 123690457 GTATGGAG-GGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 45 s rheMac3.chr2 11561 27 - 192599291 GTAGGGAG-GGACGTGGCTCCT-GTCAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20488 28 + 192460366 GTAGGGAG-GGACGTGGCTCCTGGTGAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19032 28 - 187378091 GTAGGGAG-GGACGTGGCTCCTGGTGAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 369115 27 - 91754291 GTAGGGAG-GGGCGTGACTCCG-GTGAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880514 29 - 74750902 gcatagagagggcctggcTCCTGGTTAGT i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e ponAbe2.chr3 199732301 107 + 202140232 T a score=3600.000000 s hg38.chr3_KI270935v1_alt 81735 1 + 197351 G s panTro4.chr3_GL389630_random 43772 1 + 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732194 1 + 202140232 G i ponAbe2.chr3 T 107 C 0 s nomLeu3.chr11 120821258 1 + 123690457 G i nomLeu3.chr11 T 45 C 0 s rheMac3.chr2 11588 1 - 192599291 G i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20516 1 + 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19060 1 - 187378091 G i papAnu2.chr2 C 0 T 161 s chlSab2.chr15 369142 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880543 1 - 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I a score=19127.000000 s hg38.chr3_KI270935v1_alt 81736 12 + 197351 AGTTAATTGAGA s panTro4.chr3_GL389630_random 43773 12 + 103936 AGTGAATTGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732195 12 + 202140232 AGTTAACTGAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821259 12 + 123690457 AGTTAATTGAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11589 12 - 192599291 AATTAATTGAGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20517 12 + 192460366 AATTAATTGAGA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 369143 12 - 91754291 AATGAATTGAGA i chlSab2.chr15 C 0 I 972 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880544 0 - 74750902 C e papAnu2.chr2 19061 161 - 187378091 T a score=747.000000 s hg38.chr3_KI270935v1_alt 81748 4 + 197351 CTCT s panTro4.chr3_GL389630_random 43785 4 + 103936 TCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732207 4 + 202140232 TAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821271 4 + 123690457 TGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11601 4 - 192599291 TCAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20529 4 + 192460366 TCAG i macFas5.chr2 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880544 0 - 74750902 C e chlSab2.chr15 369155 972 - 91754291 I e papAnu2.chr2 19061 161 - 187378091 T a score=31756.000000 s hg38.chr3_KI270935v1_alt 81752 28 + 197351 GTGTGGAGGGACCTGGCTCCTGGTGAGT s panTro4.chr3_GL389630_random 43789 28 + 103936 GTATAGAGGGACCTGGCTCCTGGTGAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732211 28 + 202140232 TTATGGAGCGACCTGGCTCCTGGTGAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821275 28 + 123690457 GTATGGAGGGACCTGGCTTCTGGTGAGT i nomLeu3.chr11 C 0 T 45 s rheMac3.chr2 11605 28 - 192599291 GTGGGGAGGGACGTGGCTCCTGGTGAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20533 23 + 192460366 GTAGGGAGAGACGTGGCTCCT-----GT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18900 27 - 187378091 GTATGGAGAGACCTAGGTCCT-GTGAGT i papAnu2.chr2 T 161 C 0 s calJac3.chr17 880544 13 - 74750902 ---------------GCCCCACGAGGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=2800.000000 s hg38.chr3_KI270935v1_alt 81780 1 + 197351 G s panTro4.chr3_GL389630_random 43817 1 + 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732239 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821258 1 + 123690457 G i nomLeu3.chr11 T 45 C 0 s rheMac3.chr2 11633 1 - 192599291 G i rheMac3.chr2 C 0 T 549 s macFas5.chr2 20556 1 + 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18927 1 - 187378091 G i papAnu2.chr2 C 0 C 0 s calJac3.chr17 880557 1 - 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=18466.000000 s hg38.chr3_KI270935v1_alt 81781 12 + 197351 AGTTAATTGAGA s panTro4.chr3_GL389630_random 43818 12 + 103936 AGTTAATTGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732240 12 + 202140232 AATTAACTGAGA i ponAbe2.chr3 C 0 I 180 s nomLeu3.chr11 120821259 12 + 123690457 AGTTAATTGAGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20557 12 + 192460366 AATTAATTGAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18928 12 - 187378091 AATTAACTGAGA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 880558 12 - 74750902 GATTGATTGAGG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=34110.000000 s hg38.chr3_KI270935v1_alt 81793 26 + 197351 TGAGGTATGGAG-GGACCTGGCTGCTG s panTro4.chr3_GL389630_random 43830 26 + 103936 TCAGGTATGGAG-GGACCTGGCTCCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732432 26 + 202140232 TGAGGTGTGGAG-GGACCTGGCTCCTG i ponAbe2.chr3 I 180 C 0 s nomLeu3.chr11 120821271 26 + 123690457 TGAGGTATGGAG-GGACCTGGCTTCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20569 25 + 192460366 TCAGGTAGGGAG-GGACGTGGC-TCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18940 26 - 187378091 TCAGGTGGGGAG-GGGCGTGGCTTCTG i papAnu2.chr2 C 0 T 68 s calJac3.chr17 880570 27 - 74750902 TCAGGCGTGGAGAGGGCCTGGCTCCTG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=6575.000000 s hg38.chr3_KI270935v1_alt 81819 5 + 197351 GTGAG s panTro4.chr3_GL389630_random 43856 5 + 103936 GTAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732458 5 + 202140232 GTGAG i ponAbe2.chr3 C 0 T 211 s nomLeu3.chr11 120821297 5 + 123690457 GTGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 20594 5 + 192460366 GTGAG i macFas5.chr2 C 0 C 0 s calJac3.chr17 880597 5 - 74750902 GTGAG i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I e papAnu2.chr2 18966 68 - 187378091 T a score=1365.000000 s hg38.chr3_KI270935v1_alt 81824 1 + 197351 T s panTro4.chr3_GL389630_random 43861 1 + 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732252 1 + 202140232 T i ponAbe2.chr3 T 211 C 0 s nomLeu3.chr11 120821302 1 + 123690457 T i nomLeu3.chr11 C 0 T 152 s macFas5.chr2 20599 1 + 192460366 T i macFas5.chr2 C 0 C 0 s calJac3.chr17 880602 1 - 74750902 T i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I e papAnu2.chr2 18966 68 - 187378091 T a score=1000.000000 s hg38.chr3_KI270935v1_alt 81825 1 + 197351 G s panTro4.chr3_GL389630_random 43862 1 + 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732253 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 20600 1 + 192460366 G i macFas5.chr2 C 0 I 14 s calJac3.chr17 880603 1 - 74750902 G i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I e papAnu2.chr2 18966 68 - 187378091 T e nomLeu3.chr11 120821303 152 + 123690457 T a score=1910.000000 s hg38.chr3_KI270935v1_alt 81826 2 + 197351 AG s panTro4.chr3_GL389630_random 43863 2 + 103936 AG i panTro4.chr3_GL389630_random C 0 I 14 s ponAbe2.chr3 199732254 2 + 202140232 AG i ponAbe2.chr3 C 0 I 45 s macFas5.chr2 20615 2 + 192460366 AG i macFas5.chr2 I 14 C 0 s papAnu2.chr2 18898 2 - 187378091 AG i papAnu2.chr2 T 68 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880604 0 - 74750902 C e chlSab2.chr15 369155 972 - 91754291 I e nomLeu3.chr11 120821303 152 + 123690457 T a score=1566.000000 s hg38.chr3_KI270935v1_alt 81828 4 + 197351 GTAT s panTro4.chr3_GL389630_random 43879 4 + 103936 TTAT i panTro4.chr3_GL389630_random I 14 C 0 s ponAbe2.chr3 199732301 4 + 202140232 GTGT i ponAbe2.chr3 I 45 C 0 s macFas5.chr2 20617 4 + 192460366 GTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18900 4 - 187378091 GTAT i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 11634 549 - 192599291 T e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880604 0 - 74750902 C e chlSab2.chr15 369155 972 - 91754291 I e nomLeu3.chr11 120821303 152 + 123690457 T a score=9173.000000 s hg38.chr3_KI270935v1_alt 81832 7 + 197351 GGAGGGA s panTro4.chr3_GL389630_random 43883 7 + 103936 GGAGGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199732305 7 + 202140232 GGAGGGA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11085 7 - 192599291 GGAGAGA i rheMac3.chr2 T 549 C 0 s macFas5.chr2 20621 7 + 192460366 GGAGGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18904 7 - 187378091 GGAGAGA i papAnu2.chr2 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e calJac3.chr17 880604 0 - 74750902 C e chlSab2.chr15 369155 972 - 91754291 I e nomLeu3.chr11 120821303 152 + 123690457 T a score=143947.000000 s hg38.chr3_KI270935v1_alt 81839 103 + 197351 CCTGGCTCCTGGTGAGTGAGTTAATTGAGGTCAGGTATGGAG-GGACCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATCAG----------------------------------------------TTATGGAG-GGACCTGGCTCCTGGT s panTro4.chr3_GL389630_random 43890 103 + 103936 CCTGTCTCCTGGTGAGTGAGTTAATTGAGATCCGGTATGGAG-GGACCTGGATCCTGGTGAGT--------------GAGTTAATTGAGATCAG----------------------------------------------GTATGGAG-GGACCTGGCTCCTGGT i panTro4.chr3_GL389630_random C 0 T 180 s ponAbe2.chr3 199732312 103 + 202140232 CCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAGTTATGGAG-GGACCTGGCTCCTGGTGAGT--------------GAGTTAATTGAGATGAG----------------------------------------------GTATGGAG-GGACCTGGCTCCTGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821151 103 + 123690457 CCTGGCTCCTGGTGAGTGAGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTAAGT--------------GAATAAATTGAGATGAG----------------------------------------------GTATGGAG-GGACCTGGCTCCTGGG i nomLeu3.chr11 T 152 C 0 s rheMac3.chr2 11092 96 - 192599291 CGTGGCTCCT-GTGGGTGAATTAATTGAGATCAGGTGGCGAG-GGACGTGGCTCCT-----GT--------------GAATTAATTGAGATCAG----------------------------------------------GTGGGGAG-AGACGTGGCTCCTGT- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20628 142 + 192460366 CGTGGCTCTG-GTGAGTGAATTAATTGAGATCAGGTAGGGAG-GGACGTGGGTCCT-----GT--------------GAATTAATTGAGATCAGGTTGGGAGGGACGTGGGTCCTGTGGGTGAATTAATTGAGATCAGGTGTAGGGAG-GGACGTGGCTCCTGT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 18911 100 - 187378091 CCTAGGTCCT-GTGAGTGAATTAACTGAGATCAGGTGGGGAG-GGGCGTGGCTTCT-GTCCGT--------------GAATTAATTGAGATCAG----------------------------------------------GTAGGGAG-GGACGCGGCTCCTGT- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 880604 115 - 74750902 ----GCCCCACAAGGGAGGATTGATTGAGGTCAGGCGTGGAGAGGGCCTGGCTCCTGGTGAGTGGCCCCACAAGGGAGGATTGATTGAGGTCAG----------------------------------------------GCGTGGAGAGGGCCTGGCTCCTGGT i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=94739.000000 s hg38.chr3_KI270935v1_alt 81942 49 + 197351 --------------GAGTGAGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTCCTGGTGAGT--- s panTro4.chr3_GL389630_random 43813 49 + 103936 --------------GAGTGAGTTAATTGAGATCAGGTATGGAG-GGACCTGGCTCCTGGTAAGT--- i panTro4.chr3_GL389630_random T 180 I 1196 s ponAbe2.chr3 199732415 49 + 202140232 --------------GAGTGAGTTAATTGAGATGAGGTGTGGAG-GGACCTGGCTCCTGGTGAGT--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821254 49 + 123690457 --------------GAGTGAGTTAATTGAGATGAGGTATGGAG-GGACCTGGCTTCTGGTGAGT--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11188 49 - 192599291 --------------GGGTGAATTAATTGAGATCAGGTGGGGAG-GGACGTGGCTCCTGGTGAGT--- i rheMac3.chr2 C 0 I 400 s macFas5.chr2 20770 49 + 192460366 --------------CAGTGAATTAATTGAGATCAGGTGGGGAG-GGACGTGGCTCCTGGTGAGT--- i macFas5.chr2 C 0 I 4 s papAnu2.chr2 19011 49 - 187378091 --------------GAATGAATTAATTGAGATCAGGTAGGGAG-GGACGTGGCTCCTGGTGAGT--- i papAnu2.chr2 C 0 I 4 s calJac3.chr17 880719 67 - 74750902 GAGCGGCCCCACGAGGGAGGATTGATTGAGATCAGACGTGGAGAGGGCCTGGCTCCTGGTGACTGTT i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I a score=600.000000 s hg38.chr3_KI270935v1_alt 81991 1 + 197351 C s ponAbe2.chr3 199732464 1 + 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821303 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 880786 1 - 74750902 C i calJac3.chr17 C 0 C 0 e rheMac3.chr2 11237 400 - 192599291 I e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I e macFas5.chr2 20819 4 + 192460366 I e papAnu2.chr2 19060 4 - 187378091 I e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=3929.000000 s hg38.chr3_KI270935v1_alt 81992 5 + 197351 TCCTG s ponAbe2.chr3 199732465 5 + 202140232 GCCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821304 5 + 123690457 ACCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11637 5 - 192599291 GCCAC i rheMac3.chr2 I 400 C 0 s macFas5.chr2 20823 5 + 192460366 GCCAC i macFas5.chr2 I 4 C 0 s papAnu2.chr2 19064 5 - 187378091 GCCAC i papAnu2.chr2 I 4 C 0 s calJac3.chr17 880787 5 - 74750902 CCCAC i calJac3.chr17 C 0 C 0 e mm10.chr16 65401596 1124 - 98207768 I e canFam3.chr33 29037871 32 + 31377067 I e chlSab2.chr15 369155 972 - 91754291 I e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=158454.000000 s hg38.chr3_KI270935v1_alt 81997 61 + 197351 GAGGCAGCTGCTATCTGGGAACACAGGCACAGGTGGGA-----ACAGACCTTCACTTCCTGCTCAC s ponAbe2.chr3 199732470 61 + 202140232 GAGGCAGCTGCTATCTGGGAACACAGGTACAGGTGGGA-----ACAGACCTTCACTTCCTGCTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821309 61 + 123690457 GAGGCAGCTGCTATCTGGGAACACAGGCACAGGTGGGA-----ATAGACCTTCACTTCCTGCTCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11642 61 - 192599291 GAGGCAGCTGCTAGCTGGGAACACAGGCACAGGTGGGA-----ACAGACCTTCACTTCCTGCTCAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20828 61 + 192460366 GAGGCAGCTGCTAGCTGGGAACACAGGCACAGGTGGGA-----ACAGACCTTCACTTCCTGCTCAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19069 61 - 187378091 GAGGCAGCTGCTAGTTGGGAACACAGGCACAGGTGGGA-----ACAGACCTTCACTTCCCGCTCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370127 61 - 91754291 GAGGCAGCTGCTAGTTGGGAACACAGGCACAGGTGGGA-----ACAGACCTTCACTTCCTGCTCAC i chlSab2.chr15 I 972 C 0 s calJac3.chr17 880792 60 - 74750902 GAGGCAGCTGTGATTTGGAAACACA-GCACAGGTGGGA-----AGAGAACTTCGCTTCCTGCTCAC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29037903 66 + 31377067 GACATAGCTGTCATTTGGGGACATGAAAATAAGCTGGAAAGATACAGCCTTTTCTTTTCTGCCCGC i canFam3.chr33 I 32 C 0 e mm10.chr16 65401596 1124 - 98207768 I e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=185102.000000 s hg38.chr3_KI270935v1_alt 82058 61 + 197351 TTAGGTTCAGTGAGTTCTCCAAACCAGCCTCCCAGGAATGCCATTCAACATGGCTGTGAGG s ponAbe2.chr3 199732531 61 + 202140232 TTAGGTTCAGCGACTTCTCCAAACCAGCCTCCCAGGAATGCTGTTCTCTATGGCCGTGAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821370 61 + 123690457 TTAGGTTCAGCGACTTCTCCAAACCAGCCTGCCCGGAATGCCGTTCTCCATGGTCGAAAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 11703 61 - 192599291 TTAGGTTCAGCGGCTTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTGAGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20889 61 + 192460366 TTAGGTTCAGCGGCTTCTCCAAACCAGCCTCCCAGGAATGCCGTTCTCCATGGCCGTGAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19130 60 - 187378091 TTAGGTTCAGCGGCTTCTCCAAACCAGCCTCCCAGGAATTCCCTTCTCCATGGCCGTGA-G i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370188 61 - 91754291 TTAGGTTCAGCGGCTTCTCCAAACCAGCCTCCCAGGAATGCTGTTCTCCATGGCCGTGAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880852 61 - 74750902 TTAGGTTCAGCGGCTTCTCCAAACCGGCCTCCCAGGAATGCCGTTCTCCATGGCCATAGAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65402720 58 - 98207768 TCAGGTTCTGCAGCTCCTCCA---CAGCCTCTCCAGAAGGCCACTCTCGGTGACTATGAAG i mm10.chr16 I 1124 C 0 s canFam3.chr33 29037969 61 + 31377067 TTAGGTCCACCAGCTTCTCCAAGCCAGCCTCCCAGGGCTGCCCCTCTCCATCTCCATGAAG i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=469548.000000 s hg38.chr3_KI270935v1_alt 82119 218 + 197351 AGAATAAAGAAGAGAGCCTGACTCCTCTCCTGAGGCCCCTTCCCCACCCTGAGCCAGCAGGATCCACGGAGCAGAGGTCATCTGTCCCCAGCTTGGCCCACTGAGGCCAGCATGGCTGG----GCCCAGGAT-GCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagaggaaaaccgaaatctacaattgtcataaacacatttaaat s ponAbe2.chr3 199732592 218 + 202140232 GGAATCAAGAAGAGAGCCTGACTCCTCTCCTGAGGTCCCTTCCACACCCTGAGCCAGCAGGATCCACGGAGCAGAGGTCATCTGCCCGCAACTTGGCCCACTGAGGCCAGCATGGCTGG----GCCCAGGAT-GCTTGTCTCTCAGCTCCCATCCTGTGTGCTTCCACATTGGTTTAACCAGAGCAAAACTGACATCTACAATTGTCATGAACATATTTAAAT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11764 217 - 192599291 GGAATCAGAAAGAGACCCTGACTCCTCTCCTGAGGCCCCTTCCACACCCTGAGCCAGCAGGATCCACGCAGCAGAGGTCATCTGTCCCCAGCTTGGCCCACTGAGGTCAGCACGGCTGG------CCAGGGTAGCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatctacaatcgtcataaacacatttaaat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 20950 217 + 192460366 GGAATCAGAAAGAGACCCTGACTCCTCTCCTGAGGCCCCTTCCACACCCTGAGCCAGCAGAATCCACGCAGCAGAGGTCATCTGTCCCCAGCTTGGCCCACTGAGGTCAGCACGGCTGG------CCAGGGTAGCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatctacaatcgtcataaacacatttaaat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19190 217 - 187378091 GGAATCAGAAAGAGACCCTGACTCCTCTCCTGAGGCCCCTTCCACACGCTGAGCCAGCAGGATCCACGCTGCAGAGGTCATCTATCCCCAGCTTGGCCCACTGAGGTCAGCATGGCTGG------CCGGGGTAGCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAACCAGAGCAAAACTGAAATCTACAATTGTCATAAACACATTTAAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370249 217 - 91754291 GGAATCAGGAAGAGGCCCTGACACCTCTCGTGAGGCCCCTTCCACACCCTAAGCCAGCAGGATCCACGCAGCAGAGGTCATCTGTCCCCAGCTTGGCCCACTGAGGTCAGCATGGCTGG------CCAGGGTAGCTTGTCTCTCAGCTCCCATCCTGTGTACTTCCACATTGGTTTAAccagagcaaaactgaaatttacaatcgtcataaacacatttaaat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 880913 218 - 74750902 GGGATCAAGAAGAAAGCCTGATGCCGCTCCTGAGGCCCCTTCTGCACACCGAGCCAGCAGGATCCATGGAGCAGAGGTCATCCGTCCCCAGCGTGGCTGGCTGAGGCCAGAATTGCTGG----G-CCAGGTGTGCTTGTCTCTCAGCTCGCATCCTGTGTACTTCTGCATTGGTTTAGCCAGAGCAAAACTGAAATCTACAGCTGTCATGAACACATTTAAAT i calJac3.chr17 C 0 C 0 s mm10.chr16 65402778 200 - 98207768 GGAATCAGGAAGAGAGCCTGAGT--------------CTTTCTCCAGCCCTGGCCAGCAGGACCCATGGAACAGAGGTCACCT---------TTGGTTTGTTGGGGCCAACATGGCTGGCCCAGCCCAGGGGTATCTGTCTCTCAGCTGCCATCCTATTAGCCCCCACATTGGCTTGGCCTGGGGAAAACTGAAACCTGGGATTGTTGTAAACACATTTAAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29038030 195 + 31377067 GGGATCAAGAAGA---TCCGAGG--TCCCCTGAAGCTCCTCGCT----------------GCCCCGTGATGCAGAGCCCACCCTGCCCC--CCTGGGCCAGCGAGGGCCTTATCACTGG----A-TCTGGTGGGCTTGTCTCCTGGCTTCTGTTCTGTGTTCTTCCACATTGGCTCAGCCAGAGGAAAATGGAAATCTGTGATTTTTGTAAACACATTTAAAT i canFam3.chr33 C 0 I 123 e nomLeu3.chr11 120821431 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=152917.000000 s hg38.chr3_KI270935v1_alt 82337 77 + 197351 gtgcgtagaatcagc----------------------------------------------catacaaattgtgaaa------------------catacatttggctcatggtattattcactgttttgtggtggttaca s ponAbe2.chr3 199732810 76 + 202140232 GTGCATAGAATCAGC----------------------------------------------CATACAAATTATGAA-------------------CATATGTTTGGCTCATGGTATTATTCATTGTTTTGTGATGGTAACA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 11981 77 - 192599291 gtgcataggatcagc----------------------------------------------catacaaattatgaaa------------------catacgtttggctcacggtattattcattgttttgtgacggctaca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21167 77 + 192460366 gtgcataggatcagc----------------------------------------------catacaaattatgaaa------------------catacgtttggctcacggtattattcattgttttgtgacggctaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19407 77 - 187378091 GTGCGTAGGATCAGC----------------------------------------------CATACAAATTATGAAA------------------CATACGTTTGGCTCACGGTATTATTCATTGTTTTGTGACGGCTACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370466 77 - 91754291 gtgcataggatcggc----------------------------------------------catacaaatgatgaaa------------------catacgtttggctcgtggtattattcattgttttgtgacggctaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 881131 75 - 74750902 GTGTGTAGAATCAGT----------------------------------------------GATACAAGTTACGAAA------------------C--ACGTTTGGCTCACGTTTTTATTCATTGTTTTGTGATGGTTGCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65402978 76 - 98207768 GTGCACAGAATTAGC----------------------------------------------CATAAAAATTACAAAA-------------------ATACACTTGGCTCGTAATATTGCTCATTGTGTTGTGACGATTACA i mm10.chr16 C 0 I 1021 s canFam3.chr33 29038348 137 + 31377067 gtgcatggagcctgcttctccctctgcctatgtctctgcttctctctctctgtgactatcataaataagttaaaaaaaaaCACACACAAAAAAAACATAAATTTGGCTCATGGAAT---TCATCGT-TTGTGGTGGTTACA i canFam3.chr33 I 123 C 0 e nomLeu3.chr11 120821431 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=850080.000000 s hg38.chr3_KI270935v1_alt 82414 422 + 197351 gtgactatagcaaacatttcttgaaagtagaaaataagaacCCAGCACCCCTTGAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCCTGGGCTCCACATTACTGCCCTTAAGTCTGGAAATATTCTGGTCTGAGCCCCGTAGTCCAGGCCTCATGTTCAGGC-TTTCTGTCCCCAGTGATGAGAGGAGAGA--CGGCAGACCTGTCTCCGGTGAGCTCAGATGGGCCTCCC-GGAGTCTCCTGGGGTGCACAGGATTTCAAAGATCCAGGA-GGC-GCTGCCA-GGGGCTGTGAGGTCTGATGAACCTCTCACCTTCCCTCCCACACCTGCCCT--------TTTCCTGTTTCTGTGGATGCTTTTGCTGTCCTTGGCTTCCTGGACTCCAGACCTCAGGGTCATCTTTTGCTTCT-----------------CTCTGCAAGGTGCCAA s ponAbe2.chr3 199732886 422 + 202140232 ATGACTATATCAAACATTTCTTGAAAGTAGAAAATAAGAACCCAGCACCCCTTTAGCTAAGTAATGTGCCC-TCTGTCCTCAATATTCCTTCTTGGGCTCCACATTACTGCCCTTAAATCTGGAAATATTCTGGTCTGAGCCCCATAGTCCAGGCCTCATGTTCAGGC-TTTCTGTCCCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCCGATGAGCTCAGATGGGCCTCCC-AGAGTCTCCTGGGATGCACAGGATTTCAAAGATCCAGGA-GGA-GCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACCTTCCCTCCCGCACCTGCCAT--------TTTCCTGTTTCTGTGAATGCTTTCCCTGTCCTTGGCTTCCTGGACTCCAGACCTCAGGGTCATCTATTGCTTCT-----------------CTCTGCAAGGTGCCAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 12058 421 - 192599291 atgactatagcaaacatttctcgaaagtagaaaataagaacCCAGCACCCCTTTAGCTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCCGGGCTCCACATTACTGCCCTTAAGTCTGGAAATATTCTGGTCTGAGCCCCGTAGTCCAGGCCTCATATTCAGGC-TTTCTGTCCCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCCGGTGAGCTCAGATGGGCCTCCT-GGAGTCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGA-GGG-GCTGCCC-GGGGCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCCCT--------TTTCCTGTTTCTGTGAATGCTTTCCCTGTCC-TGACTTCCTGGACTCCAGACCTCAGGGTCATCTTTTGCTTCT-----------------CTCTGCAAGGTGCCAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21244 421 + 192460366 atgactatagcaaacatttctcgaaagtagaaaataagaacCCAGCACCCCTTTAGCTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCCGGGCTCCACATTACTGCCCTTAAGTCTGGAAATATTCTGGTCTGAGCCCCGTAGTCCAGGCCTCATATTCAGGC-TTTCTGTCCCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCCGGTGAGCTCAGATGGGCCTCCT-GGAGTCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGA-GGG-GCTGCCC-GGGGCTGTGGGGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCCCT--------TTTCCTGTTTCTGTGAATGCTTTCCCTGTCC-TGACTTCCTGGACTCCAGACCTCAGGGTCATCTTTTGCTTCT-----------------CTCTGCAAGGTGCCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19484 421 - 187378091 ATGACTATAGCAAACATTTCTCGAAAGTAGAAAATAAGAACCCAGCACCCCTTTAGCTAAGTAATGTGCCC-TCTTTTCTCAATATTCCTTCCCGGGCTCCACATTACTGCCCTTAAGCCTGGAAATATTCTGGTCTCAGCCCCGTAGTCCAGGCCTCATATTCAGGC-TTTCTGTCCCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTCTCTGGTGAGCTCAGATGGGCCTCCT-GGAGTCTCCTGGGGCGCACAAGATTTCAAAGATCCAGGA-GGg-gctgcca-ggggctgtgggGTCTGATGAACCTCTCACATTCCCTCCCACACCTGCCCT--------TTTCCCGTTTCTGTGAATGCTTTCCCTGTCC-TGACTTCCTGGACTCCAGACCTCAGGGTCATCTTTTGCTTCT-----------------CTCTGCAAGGTGCCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370543 416 - 91754291 atgactatagcaaacatttcttgaaagtagaaaataagaacacagCACCCCTTTAGGTAAGTAATGTGCCC-TCTTTCCTCAATATTCCTTCCTGGGCTCCACATTACTGCCCTTAAGTCTGGAAATATTCTGGTCTGAGCCCCGTAGT-CAGGCCTCATATTCAGGC-TTTCTGTCCCCAGTGATGAAAGGAGAGG--CGGCAGACCTTTTTCCGGTGAGCTC----GGGCGTCCT-GGAGTCTCCTGGGGCGCACAGGATTTCAAAGATCCAGGA-GGG-GCTGCCA-GGGGCTGTGGGGTCTGATGAACCTCTCACACTCCCTCCCACACCTGCCCT--------TTTCCCGTTTCTGTGAATGCTTTCCCTGTCC-TGACTTCCTGGACTCCAGCCCTCAGGGTCATCTTTTGCTTCT-----------------CTCTGCAAGGTGCCAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 881206 430 - 74750902 ATTACTATAGCAAACATTTCTTGAAAGTAGAAAATAAAAACCCAGCATCCCTTTAGCTAAGTAATTTGTGC-TGTCTCCTCAATATTCCTTCCCGGGCTCCACATTACCGCCCTTAAGTCCGGAAATATTCTGGTCTGAG-CCCGTAGTCCAGGCCTTATGTTCAGGC-TTCCTCTCCCCAGAAATGAAAGGAGAGG--CGGCCGACCTTTCTCCAGTGAGCCCAGATGGGCCTCTG-GCAGTCTCCTGGGGTGCATGGGATTTCCGAGATTGAGGAGGGG-GCTTCCA-GGGGCTGTGGGGTCTGATGAACCAATCACTTTCCCTTCCACAGCTACCCTTTCTACCCTTTTCTGTTTCTGTGGATGGTTTCCCTGTCCTTGGCTTCCTGGACTCCAGGCCTCAGGGTCATCTTCTGCTTCT-----------------CTCTGCAAGTTGCCAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29038485 436 + 31377067 ATGAATAGAGCAAACATTTCTTGAAAGTGGAATATGAGAACCTAGCACTTCTTTGGCTAAGTGATCCCTGCATCCTTCCTCAATATTCCTTCCCAGGCACCATATCACTGCCTGTAAGTCCCAAAATAGCCTGGTCTGAGCCCTGT------GGCCTCACGCCTGCCCACCTCTCTTCCTAGAG-TGAAAAGAGAGGGAAGGGGGACCTTCCTCTGGTGGGTTGGGACTGGCCTCCCAGGAGTTTCCTTGTGTG---AGGATTTCATAGCTCCGGGA-GGGTGAAGCCAGGGGGCTTTGGGGTCCGCTGAGCCCGTCGCCTTCCCTCTCAGACCTACTCC--------TCCTCCTGTTCCATGAATAGATCCCTACCCTTCAGCTTCCTGCACTCCAAGCCTCGGGATCTTCTTTTAATTCTCTCTGCCTCTGCCCTTCCTCTGCAAGGTGCCAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e nomLeu3.chr11 120821431 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=10096.000000 s hg38.chr3_KI270935v1_alt 82836 14 + 197351 GTCTCTCTAGGttt s ponAbe2.chr3 199733308 14 + 202140232 GTCTCTCTAGtttt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 12479 9 - 192599291 GTCTCTCTG----- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21665 9 + 192460366 GTCTCTCTG----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19905 9 - 187378091 GTCTCTCTA----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370959 9 - 91754291 GTCTCTCTA----- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29038921 14 + 31377067 GTCTTTCTAGTTCT i canFam3.chr33 C 0 I 2307 e mm10.chr16 65403054 1021 - 98207768 I e calJac3.chr17 881636 0 - 74750902 C e nomLeu3.chr11 120821431 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=156150.000000 s hg38.chr3_KI270935v1_alt 82850 128 + 197351 ttgtttgtttgttttgttattgagacggagtctcactctattgcccaggctggagtgcagtggtgcgatctcagctcactgcaacttccgactccctggttcaagcaaattctcctgcctcagcctct s ponAbe2.chr3 199733322 127 + 202140232 ttgtttgtttgttttgttattgagatggagtctcactctattgcccaggctggagtgtagtggcacgatctcagctcactgcaacctccgactccctggttcaagc-aattctcctgcctcagcctct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 12488 125 - 192599291 --Gtttgtttgatttgttattgaggcggagtctcactgtactgcccaggctggagtgcagcggcgcgacctctgctcactgcaacctccaactccctggttcaagc-gattctcctgcctcagcctct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21674 125 + 192460366 --Gtttgtttgatttgttattgaggtggagtctcactgtactgcccaggctggagtgcagcagcacaacctctgctcactgcaacctccaactccctggttcaagt-gattctcctgcctcagcctct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 19914 125 - 187378091 --GTTTGTTTGATTTGTtattgaggcggagtctcactgtactgcccaggctggagtgcagcggcgcgacctctgctcactgcaacctccaactccctggttcaagt-gattctcctgcctcagcctct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 370968 124 - 91754291 --Gtttgtttgatttgttattgaggcggagtctcactgtactgtccaggctggagtgcag-ggcgcgatctcagctcactgcaacctccaactccctggttcaagc-aattctcctgcctcagcctct i chlSab2.chr15 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881636 0 - 74750902 C e nomLeu3.chr11 120821431 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=243589.000000 s hg38.chr3_KI270935v1_alt 82978 175 + 197351 ggagtagctgggattacaggcgcccgccaccacgcctggctatttt---------------------------------------tttttt-------tttctagtagagatagggtttcaccatgttggccaggctggtctcgatctcctg------------------------------acctcatgatccacccgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc s ponAbe2.chr3 199733449 182 + 202140232 gaagtagctgggattacaggtgcctgccaccacgcctgtctatttt---------------------------------------ttttttttactgatttttagtagagatagggtttcaccatgttggccagtctggtcttgttctcctg------------------------------acctcatgatccgcccgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcctggcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821431 182 + 123690457 Ggagtagctgggattacaggtgcctgccaccacacctggctatttt---------------------------------------ttttttttattgatttttagtagagatagggtttcaccatgttggccaggctggtctcgatctcctg------------------------------accttgtgatctgcccaccttggcctcccaaagtgctgggattacaggagtgagccactgtgcacggcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 12613 184 - 192599291 ggagtcgctgggattacaggcacccgccaccacagctggcttttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21799 182 + 192460366 ggagtcgctgggattacaggcacccgccaccacagctggctttttt---------------------------------------ttttttttctggatttttagtagagatacggtttcaccatgttggccaggctggtctcgatctcctg------------------------------acctcgtgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20039 179 - 187378091 ggagtcgctgggattacaggcacccgccaccacagctggctttttt------------------------------------------tttttctggatttttagtagagatacggtttcaccatgttggccaggctagtctcgatctcctg------------------------------acctcgtgatccgcctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 371092 178 - 91754291 ggagtcgctgggattacaggcgcccgccaccacagctggctttttt-------------------------------------------ttttctggatttttagtagagatacggtttcaccatgttggccaggctggtctcgatctcctg------------------------------acctcgtgatccacctgccttggcctcccaaagtgctgggattacaggagtgagccactgtgcccggcc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881636 0 - 74750902 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=194843.000000 s hg38.chr3_KI270935v1_alt 83153 84 + 197351 GTCTCTCTAGTTTTACTTTGCAATGTCGTTCATATCCATCCCCTTTCTAGTGCCACTGCTGAAGTCCTAAGTCACTGCCTCCTA s ponAbe2.chr3 199733631 84 + 202140232 ATCTCTCTAGTTTTACTCTGCCATATCATTCATATCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTAGGTCACAGCCTTCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821613 84 + 123690457 ATCTCTCTAGTTTTACTTTGCAATGTTGTTCATATCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTAGGTCATGGCCTCCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 12797 84 - 192599291 ATCTCTCTAGTTTTACTTTGCAATATCGTTCATACCCATCCCCTTTCTAGTCGCGCTGCTGAAGTcctgggtcacggcctcctg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 21981 84 + 192460366 ATCTCTCTAGTTTTACTTTGCAATATCGTTCATACCCATCCCCTTTCTAGTCGCGCTGCTGAAGTCCTGGGTCACGGCCTCCTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20218 84 - 187378091 atctcTCTAGTTTTACTTTGCAATATCGTTCATACCCATCCCCTTTCTAGTCCCGCTGCTGAAGTCCTGGGTCACGGcctccta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 371270 84 - 91754291 ATCTCTCTAGTTTTACTTTGCAATATCGTTCATACCCATCCCCTTTCTAGTCCCACTGCTGAAGTCCTGGGTCACGGCCTCCTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 881636 83 - 74750902 GTCTCTCTAGTTTTACTTTGTAATATCGTTCATATCCATCCCC-TTCTAGTCCCACTGCTGAAGCCCTAGGTCACAGCCTCCTA i calJac3.chr17 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=5922.000000 s hg38.chr3_KI270935v1_alt 83237 3 + 197351 ACT s ponAbe2.chr3 199733715 3 + 202140232 ACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821697 3 + 123690457 ACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 12881 3 - 192599291 act i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22065 3 + 192460366 ACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20302 3 - 187378091 act i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 371354 3 - 91754291 ACT i chlSab2.chr15 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=1000.000000 s hg38.chr3_KI270935v1_alt 83240 1 + 197351 G s ponAbe2.chr3 199733718 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 12884 1 - 192599291 g i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22068 1 + 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20305 1 - 187378091 g i papAnu2.chr2 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e nomLeu3.chr11 120821700 0 + 123690457 C e panTro4.chr3_GL389630_random 43862 1196 + 103936 I a score=8007.000000 s hg38.chr3_KI270935v1_alt 83241 9 + 197351 GTCCTCCTG s panTro4.chr3_GL389630_random 45058 9 + 103936 gtcctcctg i panTro4.chr3_GL389630_random I 1196 C 0 s ponAbe2.chr3 199733719 9 + 202140232 GTCCTCCTG i ponAbe2.chr3 C 0 T 10 s rheMac3.chr2 12885 9 - 192599291 gtccccctg i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 20306 9 - 187378091 gtccccctg i papAnu2.chr2 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22069 0 + 192460366 C e nomLeu3.chr11 120821700 0 + 123690457 C a score=3438.000000 s hg38.chr3_KI270935v1_alt 83250 6 + 197351 CCCTAA s panTro4.chr3_GL389630_random 45067 6 + 103936 ccctaa i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chr2 12894 6 - 192599291 ccctaa i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 20315 6 - 187378091 ccctaa i papAnu2.chr2 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22069 0 + 192460366 C e ponAbe2.chr3 199733728 10 + 202140232 T e nomLeu3.chr11 120821700 0 + 123690457 C a score=2346.000000 s hg38.chr3_KI270935v1_alt 83256 8 + 197351 CTCCTCCC s panTro4.chr3_GL389630_random 45073 8 + 103936 ctcctccc i panTro4.chr3_GL389630_random C 0 C 0 s papAnu2.chr2 20321 8 - 187378091 ctcctccc i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22069 0 + 192460366 C e ponAbe2.chr3 199733728 10 + 202140232 T e nomLeu3.chr11 120821700 0 + 123690457 C a score=1079.000000 s hg38.chr3_KI270935v1_alt 83264 16 + 197351 TGACCAGTCCTCCAGC s panTro4.chr3_GL389630_random 45081 16 + 103936 tgactggtcctcctgc i panTro4.chr3_GL389630_random C 0 T 88 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22069 0 + 192460366 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733728 10 + 202140232 T e nomLeu3.chr11 120821700 0 + 123690457 C a score=5624.000000 s hg38.chr3_KI270935v1_alt 83280 49 + 197351 CCTAAGTCTCCTCCCTGACCTGTCCTCCTGCCCTAA-CTCCTCCCTGACC s panTro4.chr3_GL389630_random 45009 48 + 103936 cctgagtctcCTCCCTGACC-GTCCTcctgccctagtctcctcc-tgacc i panTro4.chr3_GL389630_random T 88 C 0 s macFas5.chr2 22069 28 + 192460366 ---------------------GTCCCCCTGCCCTAA-CTCCTCCCCGACC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733728 10 + 202140232 T e nomLeu3.chr11 120821700 0 + 123690457 C a score=36276.000000 s hg38.chr3_KI270935v1_alt 83329 45 + 197351 GGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45057 45 + 103936 tgtcctcctgccctaactcctccctgactggtcctcctgccctaa i panTro4.chr3_GL389630_random C 0 I 90 s ponAbe2.chr3 199733718 45 + 202140232 GGTCCTCCTGCCCTAACTCCTCCCTGACTTGTCCTCCTGCCCTAA i ponAbe2.chr3 T 10 C 0 s nomLeu3.chr11 120821700 44 + 123690457 GGTCCCCCTGCCCTAACTCCTCCCTGACTGG-CCTCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22097 45 + 192460366 GGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 T 29 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=30770.000000 s hg38.chr3_KI270935v1_alt 83374 41 + 197351 CTCCTCCCTGACCGATCCTCCTGCCCTAA--CTCCTCCCTGAC s panTro4.chr3_GL389630_random 45192 43 + 103936 CTCCTCCCTGACCCGTCTTCCTGCCCTGAGTCTCCTCCCTGAC i panTro4.chr3_GL389630_random I 90 C 0 s ponAbe2.chr3 199733763 41 + 202140232 CTCCTCCCTGACTGATCCTCCAGCCTTAA--CTCCTCCCTGAC i ponAbe2.chr3 C 0 T 58 s nomLeu3.chr11 120821744 41 + 123690457 CTCCTCCCTGACCGGTCCCCCTGCCCTAA--CTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22113 41 + 192460366 CTCCTCCCCGACCGGTCCCCCTGCCCTAG--CTCCTCCCGGAC i macFas5.chr2 T 29 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=10500.000000 s hg38.chr3_KI270935v1_alt 83415 17 + 197351 CTGTCCTACTGCCCT-AA s panTro4.chr3_GL389630_random 45235 18 + 103936 CGGTCCTCCTACCCTTAA i panTro4.chr3_GL389630_random C 0 T 149 s ponAbe2.chr3 199733746 17 + 202140232 TTGTCCTCCTGCCCT-AA i ponAbe2.chr3 T 58 C 0 s nomLeu3.chr11 120821785 17 + 123690457 CCGTCCTCCTGCCCT-AA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22154 17 + 192460366 TGGTCCCCCTGCCCT-AA i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=14219.000000 s hg38.chr3_KI270935v1_alt 83432 17 + 197351 CTCCTCCCTGACCGGTC s panTro4.chr3_GL389630_random 45104 17 + 103936 ctcctccctgaccagtc i panTro4.chr3_GL389630_random T 149 C 0 s ponAbe2.chr3 199733763 17 + 202140232 CTCCTCCCTGACTGATC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821802 17 + 123690457 CTCCTCCCTGACCGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22171 17 + 192460366 CTCCTCCCTGACTGGCC i macFas5.chr2 C 0 T 29 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=9447.000000 s hg38.chr3_KI270935v1_alt 83449 12 + 197351 CTCCTGCCCTAA s panTro4.chr3_GL389630_random 45121 12 + 103936 ctcctgccctaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733780 12 + 202140232 CTCCAGCCTTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821819 12 + 123690457 CCCCTGCCCTAA i nomLeu3.chr11 C 0 I 87 s macFas5.chr2 22159 12 + 192460366 CCCCTGCCCTAA i macFas5.chr2 T 29 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=6984.000000 s hg38.chr3_KI270935v1_alt 83461 12 + 197351 CTCCTCCCTGAC s panTro4.chr3_GL389630_random 45133 12 + 103936 ctcctccctgac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733792 12 + 202140232 CTCCTCCCTGAC i ponAbe2.chr3 C 0 T 85 s macFas5.chr2 22171 12 + 192460366 CTCCTCCCTGAC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120821831 87 + 123690457 I a score=705.000000 s hg38.chr3_KI270935v1_alt 83473 5 + 197351 CAGTC s panTro4.chr3_GL389630_random 45145 5 + 103936 cggtc i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22183 5 + 192460366 TGGCC i macFas5.chr2 C 0 T 130 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120821831 87 + 123690457 I a score=682.000000 s hg38.chr3_KI270935v1_alt 83478 7 + 197351 CTCCTGC s panTro4.chr3_GL389630_random 45150 7 + 103936 ctcctgc i panTro4.chr3_GL389630_random C 0 T 148 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120821831 87 + 123690457 I a score=542.000000 s hg38.chr3_KI270935v1_alt 83485 7 + 197351 CCTAAGT s panTro4.chr3_GL389630_random 45009 7 + 103936 cctgagt i panTro4.chr3_GL389630_random T 148 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120821831 87 + 123690457 I a score=5556.000000 s hg38.chr3_KI270935v1_alt 83492 29 + 197351 CTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45016 27 + 103936 ctcCTCCCTGACCG-TCCTcctgcccta- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821918 28 + 123690457 CTCCTCCCTGACTG-GCCTCCTGCCCTAA i nomLeu3.chr11 I 87 T 115 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=191.000000 s hg38.chr3_KI270935v1_alt 83521 2 + 197351 GT s panTro4.chr3_GL389630_random 45043 2 + 103936 gt i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120821946 115 + 123690457 T a score=873.000000 s hg38.chr3_KI270935v1_alt 83523 3 + 197351 CTC s panTro4.chr3_GL389630_random 45045 3 + 103936 ctc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821831 3 + 123690457 CTC i nomLeu3.chr11 T 115 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=2673.000000 s hg38.chr3_KI270935v1_alt 83526 11 + 197351 -CTCCCTGACCT s panTro4.chr3_GL389630_random 45048 10 + 103936 -ctcc-tgacct i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821834 11 + 123690457 -CTCCCTGACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 11 + 192460366 CCTCC-TAACTG i macFas5.chr2 T 130 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=13737.000000 s hg38.chr3_KI270935v1_alt 83537 15 + 197351 GTCCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45058 15 + 103936 gtcctcctgccctaa i panTro4.chr3_GL389630_random C 0 I 150 s ponAbe2.chr3 199733719 15 + 202140232 GTCCTCCTGCCCTAA i ponAbe2.chr3 T 85 C 0 s nomLeu3.chr11 120821845 15 + 123690457 GTCCCCCTGCCCTAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22069 15 + 192460366 GTCCCCCTGCCCTAA i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=51728.000000 s hg38.chr3_KI270935v1_alt 83552 70 + 197351 CTCCTCCCTGACCAGTCCTCCTGCCCT-AACTCCTCCCTGACCGGTCCTCCAGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45223 70 + 103936 CTCCTCCCTGACCGGTCCTCCTACCCTTAACTCCTCCCTGACTGG-CCTCCTACCCTAACTCCTCTCTGAC i panTro4.chr3_GL389630_random I 150 C 0 s ponAbe2.chr3 199733734 70 + 202140232 CTCCTCCCTGACTTGTCCTCCTGCCCT-AACTCCTCCCTGACTGATCCTCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 C 0 T 86 s nomLeu3.chr11 120821860 70 + 123690457 CTCCTCCCTGACCAGTCCCCCTGCCCT-AACTCCTCCCTGACCCATCCTCCAGTCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22084 70 + 192460366 CTCCTCCCCGACCGGTCCCCCTGCCCT-AGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCGGAC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=734.000000 s hg38.chr3_KI270935v1_alt 83622 3 + 197351 CAG s panTro4.chr3_GL389630_random 45293 3 + 103936 CAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120821930 3 + 123690457 TGG i nomLeu3.chr11 C 0 I 115 s macFas5.chr2 22154 3 + 192460366 TGG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=273.000000 s hg38.chr3_KI270935v1_alt 83625 1 + 197351 T s panTro4.chr3_GL389630_random 45296 1 + 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22157 1 + 192460366 T i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T e nomLeu3.chr11 120821933 115 + 123690457 I a score=6798.000000 s hg38.chr3_KI270935v1_alt 83626 13 + 197351 CCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45297 13 + 103936 CCTCCTGCCCTGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822048 13 + 123690457 CCTCCTGCCCTAA i nomLeu3.chr11 I 115 C 0 s macFas5.chr2 22158 13 + 192460366 CCCCCTGCCCTAA i macFas5.chr2 C 0 T 113 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=682.000000 s hg38.chr3_KI270935v1_alt 83639 5 + 197351 GTCTC s panTro4.chr3_GL389630_random 45310 3 + 103936 --CTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822061 5 + 123690457 GTCTC i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22171 113 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=4293.000000 s hg38.chr3_KI270935v1_alt 83644 10 + 197351 CTCCCTGACC s panTro4.chr3_GL389630_random 45313 10 + 103936 CTCCCTGACC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822066 10 + 123690457 CTCCCTGACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 10 + 192460366 CCTCCTAACT i macFas5.chr2 T 113 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=2386.000000 s hg38.chr3_KI270935v1_alt 83654 3 + 197351 GGT s panTro4.chr3_GL389630_random 45323 3 + 103936 GAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733718 3 + 202140232 GGT i ponAbe2.chr3 T 86 C 0 s nomLeu3.chr11 120822076 3 + 123690457 GGT i nomLeu3.chr11 C 0 T 146 s macFas5.chr2 22068 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=56515.000000 s hg38.chr3_KI270935v1_alt 83657 71 + 197351 CCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCAGCCCTAA s panTro4.chr3_GL389630_random 45326 71 + 103936 TTTCCTGCCCTAACTCCTCCCTGACCAGTCCCCCTGCTCTAACTCCTCCCTGACCGATCCTCTAGCCCTAA i panTro4.chr3_GL389630_random C 0 I 118 s ponAbe2.chr3 199733721 71 + 202140232 CCTCCTGCCCTAACTCCTCCCTGACTTGTCCTCCTGCCCTAACTCCTCCCTGACTGATCCTCCAGCCTTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120821933 71 + 123690457 CCTCCTGCCCTAACTCCTCCCTGACCGGTCCCCCTGCCCTAACTCCTCCCTGACCAAGCCCCCTGCCCTAA i nomLeu3.chr11 T 146 C 0 s macFas5.chr2 22071 71 + 192460366 CCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=10820.000000 s hg38.chr3_KI270935v1_alt 83728 12 + 197351 CTCCTCCCTGAC s panTro4.chr3_GL389630_random 45515 12 + 103936 ctcctccctgac i panTro4.chr3_GL389630_random I 118 C 0 s ponAbe2.chr3 199733792 12 + 202140232 CTCCTCCCTGAC i ponAbe2.chr3 C 0 T 58 s nomLeu3.chr11 120822004 12 + 123690457 CTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22142 12 + 192460366 CTCCTCCCGGAC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=24355.000000 s hg38.chr3_KI270935v1_alt 83740 32 + 197351 CGGTCCTCCTGCCCTAACTCCTCCCTGACCGG s panTro4.chr3_GL389630_random 45527 32 + 103936 cagtccccctgccctaactcctccctgacctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733746 32 + 202140232 TTGTCCTCCTGCCCTAACTCCTCCCTGACTGA i ponAbe2.chr3 T 58 C 0 s nomLeu3.chr11 120822016 32 + 123690457 CCAGCCCCCTGCCCTAACTCCTCCCTGACTGG i nomLeu3.chr11 C 0 I 324 s macFas5.chr2 22154 32 + 192460366 TGGTCCCCCTGCCCTAACTCCTCCCTGACTGG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=780.000000 s hg38.chr3_KI270935v1_alt 83772 2 + 197351 TC s panTro4.chr3_GL389630_random 45559 2 + 103936 tc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733778 2 + 202140232 TC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 22186 2 + 192460366 CC i macFas5.chr2 C 0 T 29 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120822048 324 + 123690457 I a score=600.000000 s hg38.chr3_KI270935v1_alt 83774 1 + 197351 C s panTro4.chr3_GL389630_random 45561 1 + 103936 c i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733780 1 + 202140232 C i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 22159 1 + 192460366 C i macFas5.chr2 T 29 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120822048 324 + 123690457 I a score=18901.000000 s hg38.chr3_KI270935v1_alt 83775 23 + 197351 TCCAGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45562 23 + 103936 tcctgccGTAACTCCTCCCTGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733781 23 + 202140232 TCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 C 0 T 85 s nomLeu3.chr11 120822372 23 + 123690457 CCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 I 324 C 0 s macFas5.chr2 22160 23 + 192460366 CCCTGCCCTAACTCCTCCCTGAC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=366.000000 s hg38.chr3_KI270935v1_alt 83798 5 + 197351 CAGTC s panTro4.chr3_GL389630_random 45585 5 + 103936 CAATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822395 5 + 123690457 CCGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22183 5 + 192460366 TGGCC i macFas5.chr2 C 0 T 34 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=1224.000000 s hg38.chr3_KI270935v1_alt 83803 8 + 197351 CTCCTCCC s panTro4.chr3_GL389630_random 45590 8 + 103936 CCCATGCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822400 8 + 123690457 CTCCTGCC i nomLeu3.chr11 C 0 T 360 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 34 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=1537.000000 s hg38.chr3_KI270935v1_alt 83811 16 + 197351 CTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45598 16 + 103936 CTAACTCCTccctgac i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 34 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120822408 360 + 123690457 T a score=-791.000000 s hg38.chr3_KI270935v1_alt 83827 2 + 197351 CC- s panTro4.chr3_GL389630_random 45614 2 + 103936 ct- i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22154 2 + 192460366 -TG i macFas5.chr2 T 34 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120822408 360 + 123690457 T a score=15294.000000 s hg38.chr3_KI270935v1_alt 83829 27 + 197351 GTCCTCCTGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45616 27 + 103936 gtcctcctgccctaactcctccctgac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733719 27 + 202140232 GTCCTCCTGCCCTAACTCCTCCCTGAC i ponAbe2.chr3 T 85 C 0 s macFas5.chr2 22156 27 + 192460366 GTCCCCCTGCCCTAACTCCTCCCTGAC i macFas5.chr2 C 0 T 125 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120822408 360 + 123690457 T a score=4440.000000 s hg38.chr3_KI270935v1_alt 83856 20 + 197351 CTGTCCTCCAGCCCTAACTC s panTro4.chr3_GL389630_random 45643 20 + 103936 cggtccccctgccctaactc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733746 20 + 202140232 TTGTCCTCCTGCCCTAACTC i ponAbe2.chr3 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22183 125 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120822408 360 + 123690457 T a score=17327.000000 s hg38.chr3_KI270935v1_alt 83876 38 + 197351 CTCCCTGACCAGTCCTCCAGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45663 38 + 103936 ctccctgaccagtcctctagccctaactcctccctgac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733766 38 + 202140232 CTCCCTGACTGATCCTCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 C 0 T 85 s macFas5.chr2 22058 38 + 192460366 CCTCCTAACTGGTCCCCCTGCCCTAACTCCTCCCCGAC i macFas5.chr2 T 125 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e nomLeu3.chr11 120822408 360 + 123690457 T a score=14919.000000 s hg38.chr3_KI270935v1_alt 83914 77 + 197351 CGGTCCTACTGCCCTAA--CTCCTCCCTGACCGGTCCTCCTGCCCTAA--CTCCTCCCTGACCAGTCCTCCTGCCCTAAGT s panTro4.chr3_GL389630_random 45701 81 + 103936 tggtcctcctgccctaagtctcctccctgacctgtcctcctgccctgagtctcctccctgacctgtcctcctgccctgAGT i panTro4.chr3_GL389630_random C 0 T 709 s macFas5.chr2 22096 75 + 192460366 CGGTCCCCCTGCCCTAG--CTCCTCCCCGACCGGTCCCCCTGCCCTAG--CTCCTCCCGGACTGGTCCCCCTGCCCTAA-- i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120822408 360 + 123690457 T a score=4150.000000 s hg38.chr3_KI270935v1_alt 83991 16 + 197351 CTCCTCCCTGACCGGT s panTro4.chr3_GL389630_random 45073 16 + 103936 ctcctccctgactggt i panTro4.chr3_GL389630_random T 709 C 0 s macFas5.chr2 22171 16 + 192460366 CTCCTCCCTGACTGGC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T e nomLeu3.chr11 120822408 360 + 123690457 T a score=600.000000 s hg38.chr3_KI270935v1_alt 84007 1 + 197351 C s panTro4.chr3_GL389630_random 45089 1 + 103936 c i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822048 1 + 123690457 C i nomLeu3.chr11 T 360 C 0 s macFas5.chr2 22187 1 + 192460366 C i macFas5.chr2 C 0 T 130 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=4911.000000 s hg38.chr3_KI270935v1_alt 84008 17 + 197351 CTCCTGCCCTAAGTCTC s panTro4.chr3_GL389630_random 45090 17 + 103936 ctcctgccctaagtctc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822049 17 + 123690457 CTCCTGCCCTAAGTCTC i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22188 130 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=3980.000000 s hg38.chr3_KI270935v1_alt 84025 11 + 197351 CTCCCTGACCT s panTro4.chr3_GL389630_random 45107 11 + 103936 ctccctgacca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822066 11 + 123690457 CTCCCTGACCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 11 + 192460366 CCTCCTAACTG i macFas5.chr2 T 130 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 85 + 202140232 T a score=64057.000000 s hg38.chr3_KI270935v1_alt 84036 85 + 197351 GTCCTCCTGCCCTAACTCCTCCCTGACCAGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45118 70 + 103936 gtcctcctgccctaactcctccctgaccggtcctcctgccctaactcctccctgactggtcctcctgccc--------------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733719 85 + 202140232 GTCCTCCTGCCCTAACTCCTCCCTGACTTGTCCTCCTGCCCTAACTCCTCCCTGACTGATCCTCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 T 85 T 86 s nomLeu3.chr11 120822077 85 + 123690457 GTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCCCCTGCCCTAACTCCTCCCTGACCGGTCCCCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22069 85 + 192460366 GTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCGGAC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C a score=643.000000 s hg38.chr3_KI270935v1_alt 84121 17 + 197351 GAATCCCCCTGCCCTAA s panTro4.chr3_GL389630_random 45188 2 + 103936 ---------------AA i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22154 17 + 192460366 TGGTCCCCCTGCCCTAA i macFas5.chr2 C 0 T 113 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T e nomLeu3.chr11 120822162 0 + 123690457 C a score=482.000000 s hg38.chr3_KI270935v1_alt 84138 5 + 197351 GTCTC s panTro4.chr3_GL389630_random 45190 5 + 103936 GTCTC i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e macFas5.chr2 22171 113 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T e nomLeu3.chr11 120822162 0 + 123690457 C a score=25773.000000 s hg38.chr3_KI270935v1_alt 84143 70 + 197351 CTCCCTGACCGGTCCTCCTGCCCTAA--CTCCTCCCTGACCGGTCCTCCTGCCCT-AACTCCTCCCTGACCAG s panTro4.chr3_GL389630_random 45195 73 + 103936 CTCCCTGACCCGTCTTCCTGCCCTGAGTCTCCTCCCTGACCGGTCCTCCTACCCTTAACTCCTCCCTGACTGG i panTro4.chr3_GL389630_random C 0 I 202 s nomLeu3.chr11 120822162 61 + 123690457 ---------CCAGCCCCCTGCCCTAA--CTCCTCCCTGACCCAGCCCCCTGCCCT-AACTCCTCCCTGACTGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 70 + 192460366 CCTCCTAACTGGTCCCCCTGCCCTAA--CTCCTCCCCGACCGGTCCCCCTGCCCT-AGCTCCTCCCCGACCGG i macFas5.chr2 T 113 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=7245.000000 s hg38.chr3_KI270935v1_alt 84213 19 + 197351 TCCTCCTGCCCTAAGTCTC s panTro4.chr3_GL389630_random 45470 19 + 103936 tcctcctgccctaagtctc i panTro4.chr3_GL389630_random I 202 C 0 s nomLeu3.chr11 120822223 18 + 123690457 -CCTCCTGCCCTAAGTCTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22128 17 + 192460366 TCCCCCTGCCCTAGCTC-- i macFas5.chr2 C 0 T 87 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=4293.000000 s hg38.chr3_KI270935v1_alt 84232 10 + 197351 CTCCCTGACC s panTro4.chr3_GL389630_random 45489 10 + 103936 ctccctgacc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822241 10 + 123690457 CTCCCTGACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22058 10 + 192460366 CCTCCTAACT i macFas5.chr2 T 87 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371357 0 - 91754291 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 86 + 202140232 T a score=3295.000000 s hg38.chr3_KI270935v1_alt 84242 3 + 197351 GGT s panTro4.chr3_GL389630_random 45499 3 + 103936 tgt i panTro4.chr3_GL389630_random C 0 T 234 s ponAbe2.chr3 199733718 3 + 202140232 GGT i ponAbe2.chr3 T 86 C 0 s nomLeu3.chr11 120822251 3 + 123690457 GGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22068 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 371357 3 - 91754291 GGT i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e papAnu2.chr2 20329 0 - 187378091 C a score=95648.000000 s hg38.chr3_KI270935v1_alt 84245 83 + 197351 CCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAACTCCTCCCTGACCAATCCCCCTGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45268 83 + 103936 CCTCCTACCCTAACTCCTCTCTGACCAGTCCTCCTGCCCTGACTTCTCCCTGACCGATTTTCCTGCCCTAACTCCTCCCTGAC i panTro4.chr3_GL389630_random T 234 C 0 s ponAbe2.chr3 199733721 83 + 202140232 CCTCCTGCCCTAACTCCTCCCTGACTTGTCCTCCTGCCCTAACTCCTCCCTGACTGATCCTCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 C 0 T 76 s nomLeu3.chr11 120822254 83 + 123690457 CCCCCTGCCCTAACTCCTCCCTGACTGGTCCCCCTGCCCTAACTCCTCCCTGACTGGTCCTCCTACCCTAACTCATCCCTGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22071 83 + 192460366 CCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCGGAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 371360 83 - 91754291 CCCCCTGCCCTAACTCCTCGCCGACCGGTCCCCCTGCCCTAACTCCTTGCTGACCACTCCCCCTGCCCTAACTCCTCGCTGAC i chlSab2.chr15 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e papAnu2.chr2 20329 0 - 187378091 C a score=476.000000 s hg38.chr3_KI270935v1_alt 84328 1 + 197351 C s panTro4.chr3_GL389630_random 45351 1 + 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822337 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22154 1 + 192460366 T i macFas5.chr2 C 0 C 0 s chlSab2.chr15 371443 1 - 91754291 C i chlSab2.chr15 C 0 I 28 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 76 + 202140232 T a score=15783.000000 s hg38.chr3_KI270935v1_alt 84329 33 + 197351 AATCCCCCTGCCCTAACTCCTCCCTGACCGGTC s panTro4.chr3_GL389630_random 45352 33 + 103936 AGTCCCCCTGCTCTAACTCCTCCCTGACCGATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822338 33 + 123690457 CGGCCCCCTGCCCTAACTCCTCCCTGACCGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22155 33 + 192460366 GGTCCCCCTGCCCTAACTCCTCCCTGACTGGCC i macFas5.chr2 C 0 T 34 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 76 + 202140232 T a score=-545.000000 s hg38.chr3_KI270935v1_alt 84362 6 + 197351 CTCCTC s panTro4.chr3_GL389630_random 45385 2 + 103936 CT---- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822371 6 + 123690457 CCCCTG i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 34 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 76 + 202140232 T a score=3507.000000 s hg38.chr3_KI270935v1_alt 84368 18 + 197351 CCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45387 3 + 103936 --CTA------------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733728 18 + 202140232 CCCTAACTCCTCCCTGAC i ponAbe2.chr3 T 76 C 0 s nomLeu3.chr11 120822377 18 + 123690457 CCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 34 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C a score=23655.000000 s hg38.chr3_KI270935v1_alt 84386 34 + 197351 CTGTCCTCCTGCCCTAACTCCTCCCTGACCGGTC s panTro4.chr3_GL389630_random 45390 24 + 103936 ----------GCCCTAACTCCTccctgaccggtc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733746 34 + 202140232 TTGTCCTCCTGCCCTAACTCCTCCCTGACTGATC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120822395 34 + 123690457 CCGGCCTCCTGCCCTAACTCCTCCCTGACTGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 22154 34 + 192460366 TGGTCCCCCTGCCCTAACTCCTCCCTGACTGGCC i macFas5.chr2 T 34 T 144 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e papAnu2.chr2 20329 0 - 187378091 C a score=1361.000000 s hg38.chr3_KI270935v1_alt 84420 5 + 197351 CTCCA s panTro4.chr3_GL389630_random 45414 5 + 103936 ctcct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733780 5 + 202140232 CTCCA i ponAbe2.chr3 C 0 T 29 s nomLeu3.chr11 120822429 5 + 123690457 GTCCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 144 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C a score=10629.000000 s hg38.chr3_KI270935v1_alt 84425 19 + 197351 GCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45419 19 + 103936 gccctaactcctccctgac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733756 19 + 202140232 GCCCTAACTCCTCCCTGAC i ponAbe2.chr3 T 29 C 0 s nomLeu3.chr11 120822434 19 + 123690457 ACCCTAACTCCTCCCTGAC i nomLeu3.chr11 C 0 T 116 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 144 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C a score=13169.000000 s hg38.chr3_KI270935v1_alt 84444 29 + 197351 CCGTCCTCCAGCCCTAACTCCTCCCTGAC s panTro4.chr3_GL389630_random 45438 29 + 103936 ccgtcctcctgccctaactcctccctgac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733775 29 + 202140232 TGATCCTCCAGCCTTAACTCCTCCCTGAC i ponAbe2.chr3 C 0 T 19 s nomLeu3.chr11 120822337 29 + 123690457 CCGGCCCCCTGCCCTAACTCCTCCCTGAC i nomLeu3.chr11 T 116 T 147 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 144 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C a score=10673.000000 s hg38.chr3_KI270935v1_alt 84473 41 + 197351 CTGTCCTCCTGCCCTAAGTCTCCTCCCTGACCAGTCCTCCT s panTro4.chr3_GL389630_random 45467 41 + 103936 ctgtcctcctgccctaagtctcctccctgacctgtcctcct i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822219 41 + 123690457 CTGGCCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCCCCT i nomLeu3.chr11 T 147 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22188 144 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T a score=6646.000000 s hg38.chr3_KI270935v1_alt 84514 25 + 197351 GCCCTAAGT--CTCCTCCCTGACCGGT s panTro4.chr3_GL389630_random 45508 23 + 103936 gccctaa----ctcctccctgaccagt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120822260 23 + 123690457 GCCCTAA----CTCCTCCCTGACTGGT i nomLeu3.chr11 C 0 T 75 s macFas5.chr2 22044 27 + 192460366 GTCCTGGGTCACGGCCTCCTAACTGGT i macFas5.chr2 T 144 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T a score=9430.000000 s hg38.chr3_KI270935v1_alt 84539 44 + 197351 CCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45531 42 + 103936 ccccctgccctaa--ctcctccctgacctgtcctcctgccGTAA i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22071 42 + 192460366 CCCCCTGCCCTAA--CTCCTCCCCGACCGGTCCCCCTGCCCTAG i macFas5.chr2 C 0 T 55 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822283 75 + 123690457 T a score=231.000000 s hg38.chr3_KI270935v1_alt 84583 5 + 197351 GTCTC s panTro4.chr3_GL389630_random 45573 3 + 103936 --CTC i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22113 55 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822283 75 + 123690457 T a score=26790.000000 s hg38.chr3_KI270935v1_alt 84588 144 + 197351 CTCCCTGACCAGTCCTCCTGCCCTAACTCCTCCCTGACCGGTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACCCGTCCTCCAGCCCTAACTCCTCCCTGACCGGTCCTCCTGCCCTAA s panTro4.chr3_GL389630_random 45576 142 + 103936 CTCCCTGACCAATCCCCATGCCCTAACTCCTccctgacctgtcctcctgccctaactcctccctgaccggtccccctgccctaa--ctcctccctgaccagtcctctagccctaactcctccctgactggtcctcctgccctaa i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 22058 113 + 192460366 CCTCCTAACTGGTCCCCCTGCCCTAACTCCTCCCCGACCGGTCCCCCTGCCCTAGCTCCTCCCCGACCGGTCCCCCTGCCCTAG-------------------------------CTCCTCCCGGACTGGTCCCCCTGCCCTAA i macFas5.chr2 T 55 T 29 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822283 75 + 123690457 T a score=191.000000 s hg38.chr3_KI270935v1_alt 84732 2 + 197351 GT s panTro4.chr3_GL389630_random 45718 2 + 103936 gt i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22171 29 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822283 75 + 123690457 T a score=14296.000000 s hg38.chr3_KI270935v1_alt 84734 75 + 197351 CTCCTCCCTGACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACC s panTro4.chr3_GL389630_random 45720 75 + 103936 ctcctccctgacctgtcctcctgccctgagtctcctccctgacctgtcctcctgccctgAGTCTCCTCCCTGACC i panTro4.chr3_GL389630_random C 0 T 31 s nomLeu3.chr11 120822208 59 + 123690457 CTCCTCCCTGACTGG-CCTCCTGCCCTAAGTCTCCTCCCTGACCGGTCCCCCTGCCCTAA--------------- i nomLeu3.chr11 T 75 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22171 29 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T a score=2717.000000 s hg38.chr3_KI270935v1_alt 84809 27 + 197351 AGTACTCCTGCCCTAAGTCTCCTCCCT s panTro4.chr3_GL389630_random 45764 27 + 103936 tgtcctcctgccctgAGTCTCCTCCCT i panTro4.chr3_GL389630_random T 31 C 0 s nomLeu3.chr11 120822267 9 + 123690457 ------------------CTCCTCCCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22171 29 + 192460366 T e papAnu2.chr2 20329 0 - 187378091 C e ponAbe2.chr3 199733804 19 + 202140232 T a score=15899.000000 s hg38.chr3_KI270935v1_alt 84836 35 + 197351 GACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACT s panTro4.chr3_GL389630_random 45791 35 + 103936 GACCGGTCCTCCTGCCCTAAGTCTCCTCCCTGACC i panTro4.chr3_GL389630_random C 0 T 31 s nomLeu3.chr11 120822276 33 + 123690457 GACTGGTCCCCCTGCCCTAA--CTCCTCCCTGACT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 20329 33 - 187378091 gaccggtccccctgccctaa--ctcctccccgact i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22171 29 + 192460366 T e ponAbe2.chr3 199733804 19 + 202140232 T a score=6248.000000 s hg38.chr3_KI270935v1_alt 84871 18 + 197351 GGTCCTCCTGCCCTAAGT s panTro4.chr3_GL389630_random 45795 18 + 103936 GGTCCTCCTGCCCTAAGT i panTro4.chr3_GL389630_random T 31 C 0 s nomLeu3.chr11 120822309 17 + 123690457 GGTCCTCCTACCCTAAC- i nomLeu3.chr11 C 0 I 8191 s papAnu2.chr2 20362 16 - 187378091 ggtccccctgccctaa-- i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 12900 0 - 192599291 C e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22171 29 + 192460366 T e ponAbe2.chr3 199733804 19 + 202140232 T a score=7031.000000 s hg38.chr3_KI270935v1_alt 84889 10 + 197351 CTCCTCCCTG s panTro4.chr3_GL389630_random 45813 10 + 103936 CTCCTCCCTG i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chr2 12900 10 - 192599291 ctcctccctg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22142 10 + 192460366 CTCCTCCCGG i macFas5.chr2 T 29 C 0 s papAnu2.chr2 20378 9 - 187378091 ctcctccc-g i papAnu2.chr2 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881719 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822326 8191 + 123690457 I a score=12997.000000 s hg38.chr3_KI270935v1_alt 84899 12 + 197351 ACTGGTCCTCCT s panTro4.chr3_GL389630_random 45823 12 + 103936 ACCGGTCCTCCT i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chr2 12910 12 - 192599291 actggtccccct i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22152 12 + 192460366 ACTGGTCCCCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20387 12 - 187378091 accggtccccct i papAnu2.chr2 C 0 C 0 s calJac3.chr17 881719 12 - 74750902 CCTGGTCCTCTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e chlSab2.chr15 371444 28 - 91754291 I e ponAbe2.chr3 199733804 19 + 202140232 T e nomLeu3.chr11 120822326 8191 + 123690457 I a score=75204.000000 s hg38.chr3_KI270935v1_alt 84911 76 + 197351 GCCCTAACTCCTCCCTGACTGGCCTCCATCCAAGCAGAGCTTGAGTATTGCTGGTTCCCTGCTCAAACCCACCACT s panTro4.chr3_GL389630_random 45835 76 + 103936 GCCCTAACTCCTCCCTGACTGGCCTCCATCCTAGCAGAGCTTGAGTATTGCTGGTTCCCTGCTCAAACCCACCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733785 76 + 202140232 GCCTTAACTCCTCCCTGACTGGCCTCCGTCCAAGCAGAGCTTGAGGATTGCTGGTTCCCTACTCAAACCCACCACT i ponAbe2.chr3 T 19 C 0 s rheMac3.chr2 12922 48 - 192599291 gccctaactcctccctgactggcctctgtccaagcagagcttgagtat---------------------------- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22164 48 + 192460366 GCCCTAACTCCTCCCTGACTGGCCTCTGTCCAAGCAGAGCTTGAGTAT---------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20399 48 - 187378091 gccctaactcctccctgACTGGCCTCTGTCCAAGTGGAGCTTGAGTAT---------------------------- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 881731 48 - 74750902 GCCCTAACTCTTCCCTTGCTGGCCTCCGCCCAAGCAGAGCTCTGGTAC---------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65403054 1021 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e chlSab2.chr15 371444 28 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1380.000000 s hg38.chr3_KI270935v1_alt 84987 3 + 197351 GGT s panTro4.chr3_GL389630_random 45911 3 + 103936 GGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733861 3 + 202140232 GGT i ponAbe2.chr3 C 0 C 0 s mm10.chr16 65404075 3 - 98207768 GGC i mm10.chr16 I 1021 C 0 e rheMac3.chr2 12970 0 - 192599291 C e canFam3.chr33 29038935 2307 + 31377067 I e calJac3.chr17 881779 0 - 74750902 C e chlSab2.chr15 371444 28 - 91754291 I e macFas5.chr2 22212 0 + 192460366 C e papAnu2.chr2 20447 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1575895.000000 s hg38.chr3_KI270935v1_alt 84990 665 + 197351 TGCTGGttccctgctcaaacccaccactggcactggcttcccatcacatacagaataaaggctaaatgtctgtgcttggcacagaaagtcatcaaca-ggccccagagcacgtttctggtgttatcttctgctaatgccctgc----cctcactcctatgctgcagcTGAATGGAACGAGCCATTATCC---------CCTCAG-------------------GAACGCTGGCTTCTCAGTAAACGATTATAGCCCAGAAGCTCTGTCATCACAGAACCTAGCTATTGGCTAATGGGTCAGCTTTGGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaaggttaggaaaaggggagggt-g-----acagggacagagggagagcctatgcaaagacgtgttatccagttggcccctgctgtggctggctggttgctcaatcctgtaagatcttctaagaagctttatgagatgtag-tgagaaccacctgtcctggggatgagtctgtctgtcggcttccattcctcatgggttatgagttgctccacaggATTCTGGATGTATAcagat--------gctcttcatcttaggaaggggttacgtcccaataaacacgtggtaagtcaaaaatactgtaagtcagaaacacatttaataccctgataagcccatcataaagtc-aaacaattttaaa s panTro4.chr3_GL389630_random 45914 665 + 103936 TGCTGGttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatatctacgcttggcatagaaagtcataaaca-ggccccagagcacgtttctggtgttatcttctgctaatgccctgc----cctcactcctatgctgcagcTGAATGGAACGAGCCATTATCC---------CCTCGG-------------------GAACGCTGGCTTCTCAGTAAACGATTATAGCCCAGAAGCCCTGTCATCACAGAACCTAGCTATTGGCTAATGGGTCAGCTTTAGCTTCATTTCTCTGAAtaacttatttcaaaacataatcccaaggaacaaggttaggaaaaggggagggt-g-----acagggacagagggagagcctgtgcaaagacatgttatccagtcggcccctgctgtggctggctggttgcacgatcctgtaagatcttctaagaagctttctgagatgtag-tgagaaccacctgtcctggggatgagtctgtctgtcggctcccattcctcatgggttatgagttgctccacaggATTCTGGATGTATAcagat--------gttcttcatcttaggaagggtttacgtcccaataaacacgtggtaagtcaaaaatactgtaagtcagaaacacatttaataccctgataagcccatcgtaaagtc-aaacaattttaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199733864 665 + 202140232 TGCTGGTTCCCTGCTCAAACCCACCACTGGCACTGGCTTCCCATCATCTACAGAATAAAGGCTAAATGCCTACGCTTGGCACAGAAAGTCATCAACA-GGCCCCAGGGCACATTTCTAGTGTTATCTTCTGCTAATGCCCTGC----ACCCACTCCTATGCTGCAGCTAAATGGAATGAGCCATTATCC---------CCTCGG-------------------GAACACTGGCTTCTCAGTAAATGATTATAGCCCAGAAGCCCTGTCATCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAACaatttatttcaaaacataatcccaaggaacaaggttaggaaaaggggaggggag-----acagggacagagggagagcccgtgcaaagatgtgttatccattcagcccctgctgtggctggctggttgaccgatcctgtaagatcttctaagaagcTTTATGAGATGTAG-TGAGAACCATCTGTCCTGGGG-TGAGTCTGTCTGTCGCCTCCCATTCCTCATGGGTTATGAGTTGCTCCACAGGATTCTGGATGTATAcagat--------gttcctcatcttaggaaggggttacatcccaataaacatgtggtaagtcaaaaatactgtaagtcagaaacacatttaataccctgataagcccatcataaagtc-aaaaacttttaag i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 12970 662 - 192599291 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgcctacacttggcacagaaagtcatcaaca-ggccccagtgcccatttctggccttatcttctgctaatgccctgc----acccactccCATGCGGTAGCTGAATGGAAAGAGCCATTATCC---------CCTCGG-------------------GAACACTGGCTTCTCTGTAAATGATTATAGCCCGGAAACCCTGTCAGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaaggttaggaaaaggggaggggag-----acaggaacagagggagagcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagctttatgagatgtat-tgagaaccatctgtcctggggatgaa----tctgtcggctcccagtcctcatgggttacgagttgctccacaggATTCTGGATATATACGAat--------gttcctcatctgaggaaggggttacgtcccaataaacacttggtaagtcaaaaatactgtaagtcagaaacacatttaataccctgataagcccatcataaagtc-aaaaaattttaag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22212 662 + 192460366 tgctagttccctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgcctacacttggcacagaaagtcatcaaca-ggccccagtgcccatttctggccttatcttctgctaatgccctgc----acccactccCATGCGGTAGCTGAATGGAAAGAGCCATTATCC---------CCTCGG-------------------GAACACTGGCTTCTCTGTAAATGATTATAGCCCGGAAACCCTGTCAGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaaggttaggaaaaggggaggggag-----acagggacagagggagagcccgtgcaaagccgtgttatccagtcggcccctgctgtggctgactggttgtgcgatcctgtaagatcttctaagaagcTTTATGAGATGTAT-TGAGAACCATCTGTCCTGGGGATGAA----TCTGTCAGCTCCCAGTCCTCATGGGTTACGAGTTGCTCCACAGGATTCTGGATATATACGAat--------gttcctcatctgaggaaggggttacgtcccaataaacacttggtaagtcaaaaatactgtaagtcagaaacacatttaatacCCTGATAAGCCCATCATAAAGTC-AAAAAATTTTAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 20447 666 - 187378091 TGCTAGTTCCCTGCTCAAACCCACCACTGGCACTGGCTTCCCATCACCTACAGAATAAAGGCTAAATGCCTACACTTGGCACAGAAAGTCATCAACA-GGCCCCAGTGCCCATTTCTGGCCTTATCTTCTGCTAATGCCCTGC----ACCCACTCCCATGCGGTAGCCGAATGGAAAGAGCCATTATCC---------CCTCGG-------------------GAACACGGGCTTCTCCGTAAATGATTATAGCCCGGAAACCCTGTCGGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAATAATTTGTTTCAAAACATAATCCCAAGGAATAAGGTTaggaaaaggggaggggag-----acagggacagagggagagCCCGTGCAAAGCCGTGTTATCCAGTCGGCCCCTGCTGTGGCTGACTGGTTGTGCGATCCTATAAGATCTTCTAAGAAGCTTTATGAGATGTAT-TGAGAACCATCTGTCCTGGGGATGAATCTGTCTGTCGGCTCCCAGTCCTCATGGGTTATGAGTTGCTCCACAGGATTCTGGATATATACAGAT--------GTTCCTCATCTGAGGAAGGGGTTACGCCCCAATAAACACTTGGTAAGTCAAAAATACTGTAAGTCAGAAACACATTTAATACCCTGATAAgcccatcataaagtc-aaaaaattttaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 371472 660 - 91754291 tgctagtttcctgctcaaacccaccactggcactggcttcccatcacctacagaataaaggctaaatgcctacacttggcacagaaagtcatcaaca-ggccccagtgcccatttctggccttatcatctgctaatgccccgc----acccactccTATGCGGTAGGCGAATGGAAAGAGCCGTTATCC---------CCTCGG-------------------GAACACCGGCTTCTCAGTAAATGATTATAGCCAG--AACCCTGTCGGCACAGAACCCAGCTATTGGCTAATTGGTCAGCTTTAGCTTCATTTCTCTGAAtaatttatttcaaaacataatcccaaggaacaaggttaggaaaaggggaggggag-----acagggacagagggagagcccgtgcaaagccgtgttatccagtcggcccctgctgtggctcactggttgtgcgatcctgtaagatcttctaagaagcTTTATGAGATGTAT-TGAGAACCATCTGTCCTGGGGATGAC----TCTGTCGGCTCCCAGTCCTCACGGGTTACGAGTTGCTCCACAGGATTCTGGATATATAcagat--------gttcctcatctgaggaaggggttacgtcccaataaacacttggtaagtcaaaaatactgtaagtcagaaacacatttaatacCCTGATAAGCCCATCATAAAGTC-AAAAAATTTTAAG i chlSab2.chr15 I 28 C 0 s calJac3.chr17 881779 657 - 74750902 TGCTGGTTTCCTGCTCAAACCCACCACTGGAACTGGCTTCCCATCATCTACAGAAGAAAGGCTGAACGCCTACGCTTGGCGC----AGTCCCCAACAGggccccagtgcacatttctggtcttatctcctgctaatcccctgccccacccccttcctatgctgcagctgaatggaatga-ccattttcc---------ccaaaG-------------------GAACGCTGGTTTCTCAGTAAATGTTTATAGCACAGAAGCCCGGTCAGCGCAGGACGCAGCCATTGGCTAATGGGTCAGCTTTAGCTCCATTTCTCTGAAtaatttattttggaacataatctca--gagcaaggttaggaaaaggagagcaaggttagaacagggacagagggagagcccgtgcagagatgtgttatccagttggcccctgctctggctggctggttgcttgatcctgtacgatcttctaagaagctttctgagatgtatctgagaaccgtctgtcctgggaatgaa----tctgtcggctcccattcctcatgagttacgagttgctgcacaggATTCTGGATACATACAGATGTTCCTCGgttcctcgtcttaggaaggggttatgtcccgataaacaagtggtaagtcagaa------------------acatgtaagccTctgataagcccatcgtaaagtcaaaaaaattttaag i calJac3.chr17 C 0 C 0 s mm10.chr16 65404078 588 - 98207768 AGCCAGCTCCCTGTTGAGA-----GGCCATCAATGGCTTCCCATTCTCGACAGACTAGATGTGAAAGTACTGGGTCTGGCCT-----GCCACCACCA-AGCTC---TGCAGACCTCCAGCTTTATC-CCTGCTAATCCCCCTC----ACCCACTCTTGGG-TGCAGCTGAACAGGATCCCCCATTCTCCTCACCCAAGCCTTGGTCTGGGCCTTTGCTAATCTGAACCCTTGTTTCTGGGCAACTGATTGCAGCAAGG-ATCCCTGTTGGCCCAGAGCCCAGCTCTTGGCTAATGGTTTTGTGTTGGCTTAATTTCTCTaaggaatttatttaggaacataactcca----atgggattagagtaaggcaaataa-a-----acagggatggagggagggccagcacaaagacctaccctccagtcggctctagctgtggctggctagttgcttcg-cctgtgggatcttctaagagaccttggggaatgtgtctgaaaGGCATCTAT-CTGGTAACAGATCAGTGTGCCTGTCTCCTTTCC-CATGGACTACAAGTTGGCCTACAGAGTCTTGGAAATAT----AT--------ATT--------------------------------------------------------------AAAAACATATGTAATAGAGTGAT------------------TAACAACTTTAAG i mm10.chr16 C 0 I 43 e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=59263.000000 s hg38.chr3_KI270935v1_alt 85655 26 + 197351 tccaatcattgtaagccaggaccatc s panTro4.chr3_GL389630_random 46579 26 + 103936 tccaatcattgtaagccgggaccatc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734529 26 + 202140232 tcaaatcactgtaagccgggaccatc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 13632 26 - 192599291 tcaaatcattgtaaaccgggaccgtc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22874 26 + 192460366 TCAAATCATTGTAAACCGGGACCGTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 21113 26 - 187378091 tcaaatcATTGTAAACCGGGACCATC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 372132 26 - 91754291 TCAAATCATTGTAAACCGGGACCGTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 882436 26 - 74750902 tcaaatcattgtaagttgggaccatc i calJac3.chr17 C 0 C 0 e mm10.chr16 65404666 43 - 98207768 I e canFam3.chr33 29038935 2307 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=185023.000000 s hg38.chr3_KI270935v1_alt 85681 65 + 197351 tgTATACCCaagacatacacaaggatgttcatagcagctttattcaaaatagtgaaaaac--aaaac s panTro4.chr3_GL389630_random 46605 65 + 103936 tgTATACCCaagacatatacaaggatgttcatagcagctttattcaaaatagtgaaaaac--aaaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734555 65 + 202140232 tgTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaac--aaaac i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 13658 65 - 192599291 tgTATACCCaagacatatacaagaatgttcatagcagctttactcaaaatagtgaaaaac--aaaac i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22900 65 + 192460366 TGTATACCCaagacatatacaagaatgttcatagcagctttattcaaaatagtgaaaaac--aaaac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 21139 65 - 187378091 TGTATACCCAAGAcatatacaagaatgttcatagcagctttattcaaaatagtgaaaaac--aaaac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 372158 65 - 91754291 TGTATACCCaagacatatataagaatgtccatagcagctttattcaaaatagtgaaagac--aaaac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 882462 65 - 74750902 tgTACACccaagatacatgcaagaacgttcatagcagctttattcaaaatagtgaaaacc--aaaat i calJac3.chr17 C 0 C 0 s canFam3.chr33 29041242 67 + 31377067 tgtatacccaaagcgtatgcgagactattcctagcagctttctttcgaatagtgaaaaactggaaat i canFam3.chr33 I 2307 C 0 e mm10.chr16 65404666 43 - 98207768 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=346225.000000 s hg38.chr3_KI270935v1_alt 85746 134 + 197351 aatccaaatgcacagcaataggaaaacagacaaataaattgtggtata-tttatacagtggaatactatgcaacaacaaaaaaggatgaagca-taatactacac---acagcgtgagtgagtctc-acagacacagtgt s panTro4.chr3_GL389630_random 46670 134 + 103936 aatccaaatgcacagcaattggaaaacagacaaataaattgtggtata-tttatacagtggaatactatgcgacaacaaaaaaggatgaagca-taatactacac---acagcgtgagtgagtctc-acagacacagtgt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734620 134 + 202140232 aatccaaatgctcagcaattggaaaatggacaaataaattgtggtata-tttatacaatggaataatatgcaacgacaaaaaaggatgaagca-taatactacac---acagcatgagtgagtctc-acagacacagtgt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 13723 133 - 192599291 aatccaaatgcccagcaattggaaaatgggtaaataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacactacac---acagcgtgagtgagtctc-acagacacagtgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 22965 133 + 192460366 aatccaaatgcccagcaattggaaaatgggtaaataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacactacac---acagcgtgagtgagtctc-acagacacagtgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 21204 133 - 187378091 aatccaaatgcccagCAATTGgaaaatgggtaaataaattgtggtata-tttatacaatgaaatactgtgCAACAAC-AAAAAGGATGAAGTA-TAACACTACAC---ACAGCGTGAGTGAGTCTC-ACAGACACAGTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 372223 129 - 91754291 aatccaaatgcccagcaattgcaaaatgg----ataaattgtggtata-tttatacaatggaatactgtgcaacaac-aaaaaggatgaagta-taacaccacac---acagtgtgagtgagtctc-acagacacagtgt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 882527 131 - 74750902 aatccaaatgcccagcaataggaaaatggacaaataaattgtgttaca-tttatgcaatggaatactacccaaagacaaaaacagatgaagta-AAATACT-TAA---acatcatgat---gtttcaatagatacaatgt i calJac3.chr17 C 0 I 1086 s mm10.chr16 65404709 135 - 98207768 aacccaaacatccatcaataagaaaatggccacagaagttgtggttga-taattccaaaggaaaaccacccgccatc---taaggataaagcattattattatacgtaagagctctggtgaacctc-acagacagaatgt i mm10.chr16 I 43 C 0 s canFam3.chr33 29041309 130 + 31377067 gatacaagtgtccatcaataggaacatggagaaataaattg---tatactttctacaatggaatagtatctaacagcaaacaagaatggag---tactgctacac---acaacacaggggagtttc-acaggcataatgt i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120822326 8191 + 123690457 I a score=200312.000000 s hg38.chr3_KI270935v1_alt 85880 95 + 197351 taacagagagaatccagacacaaaagagcctatctatgcatgattccatttatatgaagttcaaagacatgcagagctaatctatggtgatagag s panTro4.chr3_GL389630_random 46804 95 + 103936 taacagagagaatccagacacaaaagagcctatctatgcatgattccatttatatgaagttcaaagacatgcagagctaatctatggtgatagag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734754 93 + 202140232 taac--agagaatccagacacaaaagagcctgtatatgcatgattccatttatatgaagttcaaagacatgcagagctaatctatggtgatagag i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 13856 92 - 192599291 taacagagagaatccagacacaaaagagcctatatatgcatgattccatttacatgaagctcaaagacaggcagagctaatctatggtga---ag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 23098 92 + 192460366 taacagagagaatccagacacaaaagagcctatatatgcatgattccatttacatgaagctcaaagacaggcagagctaatctatggtga---ag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 21337 93 - 187378091 TAACAGAGAgaatccagacacaaaagagcCTATAtatgcatgattccatttacacgAAGTTCAAAGACAGGCAGAGCTAATCTATGGTGAT--CG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 372352 92 - 91754291 taacagagagaatccagacacaaaagagcctatatctgcatgattccatttacatgaagctcaaagacaggcagagctaatctatggtga---ag i chlSab2.chr15 C 0 C 0 s mm10.chr16 65404844 79 - 98207768 tacatgtaagaagccaaatactgaaaagc----gcacgcacaatcctattcacatagtcctgaatg------------tgtccatggtggcagaG i mm10.chr16 C 0 I 218 s canFam3.chr33 29041439 93 + 31377067 taagaaaaagaagccagacacgaaagag--tatggaatcctaattccatttatatgaagttcagaaataggcagaactaacccatggtgatagag i canFam3.chr33 C 0 C 0 e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=124397.000000 s hg38.chr3_KI270935v1_alt 85975 72 + 197351 ataagaatggtggttacActgaaatgggaggatcgctcaaacccgggaggcggaggctgcagtgaaccatga s panTro4.chr3_GL389630_random 46899 72 + 103936 ataagaatggtggttacActgaaatgggaggatcgctcaaacccgggaggcggaggctgcagtgaagcatga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734847 72 + 202140232 ataagaatggtggttacActgaaatgggaggatcgctcgaacccaggaggtggaggctgcaatgaaccatga i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 13948 72 - 192599291 ataagaatggtggttacAGtgaaatgggaggatcgctcgaacccgggaggcggaggctgcagtgaaccatga i rheMac3.chr2 C 0 I 963 s macFas5.chr2 23190 72 + 192460366 ataagaatggtggttacAGtgaaatgggaggatcgctcgaacccgggaggcggaggctgcagtgaaccatga i macFas5.chr2 C 0 I 3 s papAnu2.chr2 21430 72 - 187378091 GTAAAAATGGTGGTTAcactgaaatgggaggatcgctcgaacccgggaggcggaggctgcagtgaaccatga i papAnu2.chr2 C 0 I 3 s chlSab2.chr15 372444 72 - 91754291 ataagaatggtggttacActgaaatgggaggatcgctcgaacccgggaggcggaggctgcagtgaaccgtga i chlSab2.chr15 C 0 I 1966 s canFam3.chr33 29041532 11 + 31377067 gcaagaatgat------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65404923 218 - 98207768 I e calJac3.chr17 882658 1086 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=8303.000000 s hg38.chr3_KI270935v1_alt 86047 19 + 197351 tgg---agctgcactccagctt s panTro4.chr3_GL389630_random 46971 19 + 103936 tgg---agctgcactccagctt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734919 22 + 202140232 tggcaccactgcactccagctt i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 23265 19 + 192460366 ---caccactgcactccagctt i macFas5.chr2 I 3 I 1142 s papAnu2.chr2 21505 19 - 187378091 ---caccgctgcactccagctt i papAnu2.chr2 I 3 I 1148 s canFam3.chr33 29041543 3 + 31377067 -------------------ttt i canFam3.chr33 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65404923 218 - 98207768 I e calJac3.chr17 882658 1086 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=57000.000000 s hg38.chr3_KI270935v1_alt 86066 208 + 197351 tggagacagagcgagaccctgtctctaaaaaaaaaaaaaaaaTGATTGTTCCATTCTGTggtggcaagtgggggcttgactggaagggaacacaagggcacctgttgaggtgctgagcacgttctgtatcttgacctgagtgtcggatacatcctggggatacatacgtacataaaaattcatcagggtatacgctacttaagctggg s panTro4.chr3_GL389630_random 46990 206 + 103936 tggagacagagcaagaccctgtctctaaaaaaaaaaaaaaa--gaTTGTTCCATTCTGTggtggcaagtgggggcttgactggaagggaacacaagggcacctgctgaggtgctgagcacattctgtatcttgacctgagtgtcggatacatcctggggatacatacgtacataaaaattcatcagggtatgagctacttaagctggg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199734941 205 + 202140232 tggagacagagcgagaccctgtctctaaaaaaaaagaaaaaaagaTTGTTCCATTCTGTGGTCGCAAAtgggggcttgcctggaaggaaacacaagggcacc---tgaggtgctgagcacgttctgtatcttgccctgagtgttggatacatcgtggagacatgtacatacataaaaattcatcagggtatatgctacttaagctggg i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 29041546 137 + 31377067 --------------------------------------------------------tgggg--------gagagaatgactgg-agggaataggagggagcctattgagatacggaaagtgtcttctatct----ctgagtggtggctagctcctgggtatattcacgt--gtaaaaattcattaagttgtaggctacttaggattga i canFam3.chr33 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65404923 218 - 98207768 I e calJac3.chr17 882658 1086 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=99922.000000 s hg38.chr3_KI270935v1_alt 86274 154 + 197351 cgtagtttacagtatgtaggttacaacataaaaaaGAAGTGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTCAGGGCCTGGCAGATGTAGGCGATTCTT s panTro4.chr3_GL389630_random 47196 154 + 103936 cgtagtttacagtatgtaggttacaccataaaaaaGAAGCGAATGAACCAAAGAATACTGGGCTCCCTGGCGTTTCCTCTTCTGCAACCCAAGGAAATAAGCCTCGGTGTGGAGAGGGCCTGTCCTGAGGGCCTGGCAAATGTAGGCGATTCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735146 154 + 202140232 catagtttacagtatgtaggttacaccataaaaaggaaGTGAATGAACCAAAGAATACTGGGCTCCCTGGCATTTCCTCTTCTGCAACCCAAGGAAATAAGCATCGGTGTGGAGAGGGCCTGTCCTCAGGGCCTGGCAAATGTAGGTGATTCTT i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 883744 154 - 74750902 catagtttatactatgtaggttacacataatgaaagaaGTGAGTGAGCCAAAGAATACTGGGCTCCCTGGTGCTTCCTCTTCTGCAACCGGAGGAAATAAGCCTCGGTGTGGAGAGCACCTGCTCTCGGGGCCTTGCAAATTTAGGTGAttctt i calJac3.chr17 I 1086 I 4660 s canFam3.chr33 29041683 154 + 31377067 tgtagtttgcagtgtgtgggttatgccctagtaaagagaTGAATGAACGAATGGACAGAGGGCTCCCTGGAGTTTCCTACACTATAGCCCAAGGACTACGGGTTAGGATTGGGGAAGGCCCATTCTCAGGTCCTTGCAAATTTAGATGATTCTC i canFam3.chr33 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65404923 218 - 98207768 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=14596.000000 s hg38.chr3_KI270935v1_alt 86428 41 + 197351 ACCACGTCTCCTTCGGTAAGCCCACCTGGCAAGT-TCTCATC s panTro4.chr3_GL389630_random 47350 41 + 103936 ACCACGTCTCCTTCGGTAAGCCCGCCTGGCAAGT-TCTCATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735300 41 + 202140232 ACCATGTCTCCTTCGGTAAGCCCACCTGGCAAGT-TCTCATC i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 29041837 42 + 31377067 ACCACCTCTTCTGTGGTGACCCTGCATGTAAACCATCTCATT i canFam3.chr33 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65404923 218 - 98207768 I e calJac3.chr17 883898 4660 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=35794.000000 s hg38.chr3_KI270935v1_alt 86469 80 + 197351 CACATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGACCCATTCGGACCCCAAGAGTTGGTATTAGAGATCATTTT s panTro4.chr3_GL389630_random 47391 80 + 103936 CACATAATCTGTGCATGCTTAACATTTGAAACCAGTGGGGACCCATTCGGACCCCAAGAGTTGGTATTAGAGATCATTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735341 80 + 202140232 CGCATAATCTGTGCATGCTCAACATTTGAAACCAGTGGGGACCCATTCAGACTCCAAGCATTGGTATTAAAGATCATTTT i ponAbe2.chr3 C 0 C 0 s mm10.chr16 65405141 80 - 98207768 CACACTGTCTGTGCTCACACAACATGCAGAACTTGTGGAATCCTCTCAGAACCCTGTCAGCTGGCATGAAGAGTTTCTTT i mm10.chr16 I 218 I 4922 s canFam3.chr33 29041879 77 + 31377067 TAAACCATCTGCGCATACTCAACATTTTGAACTTGTAGGGCCATGTTCGGACCTCA-GAGTTGGTAT-AAAGATATTTT- i canFam3.chr33 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e calJac3.chr17 883898 4660 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=5409.000000 s hg38.chr3_KI270935v1_alt 86549 11 + 197351 AAAGTGAAAAC s panTro4.chr3_GL389630_random 47471 11 + 103936 AAAGTGAAAAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735421 11 + 202140232 AAAGTGAAAAC i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 29041956 11 + 31377067 AAAGTAGAAAC i canFam3.chr33 C 0 I 5697 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e calJac3.chr17 883898 4660 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=29722.000000 s hg38.chr3_KI270935v1_alt 86560 110 + 197351 Tggccaggcacgatggcttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcgagaccaacttggccaacatggtgaaacc s panTro4.chr3_GL389630_random 47482 110 + 103936 Tggctaggcacgatggcttacacctgtaatcccagcactttgggaggctgaggtgggcggatcacatgaggtcaggagttcgagaccaacttggccaacatggtgaaacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735432 110 + 202140232 Tggccaagcacgatggcttacacctgtaatccaagcactttgggaggctgaggtgggtggatcacatgaggtcaggaattcgagaccaacctggccaatatggtgaaacc i ponAbe2.chr3 C 0 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e macFas5.chr2 23284 1142 + 192460366 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1677.000000 s hg38.chr3_KI270935v1_alt 86670 4 + 197351 ctgt s panTro4.chr3_GL389630_random 47592 4 + 103936 ctgt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735542 4 + 202140232 ctgt i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 24426 4 + 192460366 ctgg i macFas5.chr2 I 1142 C 0 e rheMac3.chr2 14020 963 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e chlSab2.chr15 372516 1966 - 91754291 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=637235.000000 s hg38.chr3_KI270935v1_alt 86674 565 + 197351 tgactcaggatgactcagattagagcaggtgactgggggtgactcaggatggagcaggtgatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgattctttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAAGAATTTATTATATCCTACAaacctgggaggca-------------------------------------------------------gaggttgcagtgagccaagattgggccatcgcactccagcctgggcaataagaatgaaactctgtctcaaaaaaaacaaaaGTTGGCCAGggctgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggtggatcacctgaggtcagaagtacgagaccatcgtggctaatatggtgaaaccccatctctactcaaaatacgaaaaaagaaaaaa----aaa----attagccaagcacggtggtgcacgcctgttatcccagctgcttaggaagctgaggcaggagaattgcctg s panTro4.chr3_GL389630_random 47596 562 + 103936 tgactcaggatgactcagattagagcaggtgactgggggtgactcaggatggagcaggtgatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgactctttggagaggatctcagaac-cattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacctgggaggca-------------------------------------------------------gaggttgcagtgagccaagattgggccatcgcactccagcctgggcaataagaatgaaactctgtctcaaaaaaa-caaaaGTTGGCTAGggctgggcgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggtggatcacctgaggtcagaagtacgagaccatcctggctaatatggtgaaaccccatctctactaaaaatatgaaaaaagaaaaaa----aaa-----ttagccaagcacggtggtgcacgcctgttatcccagctgcttaggaagctgaggcaggagaatcgcctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199735546 568 + 202140232 tgactcaggatgactcagatcagagcaggtgaccgggggtgactcaggatggagcaggtgatagaggctaggagggggtggtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacatactgatacattgattctttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacctgggaggca-------------------------------------------------------gaggttgcagtgagccaagttcggtccattgcactccagcctgggcaacaagaatgaaactctgtctcaaaaaaa-caaaaGTTGGCTAGggccaggtgtggtggctcacacctgtaatcccagcactttgggaggctaaagcaggcggatcacctgaggtcagaagtacaggaccatcctggctaatatggtgaaaccccatctctactaaaaatacaaaaaaaaaaaaaa----aaaaaaaattagccaagcatggtggtgagcgcctgttatcccagcagctcaggaagctgaggcagcagaatcgcctg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 14983 555 - 192599291 tgactcaggatgactcaggtcagagcaggtgaccaggggtgactcaggatagagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCT----------------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------gcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-caaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatctcagcactttgggaggctggggcaggtggatc------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatacacacacaaaaaaat----ata-----ttagccaagcattgtggtgcgtgcctgttatcccag-agctcaggaagctgaggcaggagaattgcttg i rheMac3.chr2 I 963 I 1 s macFas5.chr2 24430 546 + 192460366 tgactcaggatgactcaggtcagagcaggtgaccaggggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacac----tgtttggagaggatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTACAaacccaggaggtg-------------------------------------------------------gaggttgcagtgagccaagattgtgccattgcactccagtctgggcaacaagaatgaaactccatctcaaaaaaa-caaaaGTTGGCTAGAgccgggcgtggtggctcacacctataatcttagcactttgggaggctggggcaggtggatc------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatacacacacaaaaaaat----ata-----ttagccaagcatggtggtgcgtgcctgttatcccag-agctcaggaagctgaggcaggagaattgcttg i macFas5.chr2 C 0 I 1 s chlSab2.chr15 374482 553 - 91754291 tgactcaggatgactcaggtcagagcaggtgacc-ggggtgactcaggatggagcaggagatagaggctaggagggggttgtttactgaaactaggggcaaggagatgaagaaaacgaggaagttaaactttaaaatgaagagctgaacgtactgacacactgattgtttggagaagatctcagaactcattgtacttaacaATTTACAGGCTAAAACCTTTGAAGAGGAATTTATTATATCCTAAAaacccaggaggtg-------------------------------------------------------gaggttgcagtgagccaagatcgtgccattgcactccagtctgggcaacaagaatgaaactgcatctcaaagaaa-caaaaGTTGGCTAGAgccaggcatggaggctgacacccataatctcagcactttgggaggctggggcaggtggatc------------gagtatgggaccatcctggctaatatggtgaaaccccgtctctactaaaaatacaaaaaataaaaaataaaaaaa-----ttaaccaagcatggtggtgcgtgcctgttatcccag-agctcaggaagctgaggcaggagaatcgcttg i chlSab2.chr15 I 1966 I 1 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e papAnu2.chr2 21524 1148 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=125099.000000 s hg38.chr3_KI270935v1_alt 87239 90 + 197351 atcccagaggcagaggttgcagtgaactgggattgtgccactgcactccagcctaggcgac-agagcaagattctgtctc----------------------------------------------------------------aaaaataaata s panTro4.chr3_GL389630_random 48158 90 + 103936 atcccagaggcagaggttgcagtgaactgggattgcgccactgcactccagcctaggcgac-agagcaagattctgtctc----------------------------------------------------------------aaaaataaata i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736114 90 + 202140232 atcccagaggcagaggttgcagtgaactgggattgtgccactacactccagcctaggcaac-agagcaagactctgtctc----------------------------------------------------------------aaaaataaata i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 15539 154 - 192599291 atcccagaggcagagactgcagtgaactgggattgtgccactgcactccagcctgggtgac-ggagcaagactctgtctcataaataaataaataaataaataaataaataaataaataaataaataaataaataaataaataaataaataaata i rheMac3.chr2 I 1 I 12 s macFas5.chr2 24977 90 + 192460366 atcccagaggcagagactgcagtgaactgggattgtgccactgcactccagcctgggtgac-ggagcaagactctgtctc----------------------------------------------------------------ataaataaata i macFas5.chr2 I 1 I 12 s papAnu2.chr2 22672 91 - 187378091 acccaggaggtggaggttgcagtgagccaagatcgtgccattgcactccagtctgggcaacaagaatgaaactccatctc--------------------------------------------------------------aaaaaaacaaa-- i papAnu2.chr2 I 1148 I 90 s chlSab2.chr15 375036 110 - 91754291 atcctagaggcagagactgcagtgaactgggattgtgctgctgcactccagcctgggtgac-agagcaagactctgtctc--------------------------------------------ataaataaataaataaataaataaataaata i chlSab2.chr15 I 1 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=11050.000000 s hg38.chr3_KI270935v1_alt 87329 12 + 197351 cata---aataaagt s panTro4.chr3_GL389630_random 48248 12 + 103936 cata---aataaagt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736204 12 + 202140232 cata---aataaagt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 15705 15 - 192599291 aataaataataaagt i rheMac3.chr2 I 12 C 0 s macFas5.chr2 25079 15 + 192460366 aataaataataaagt i macFas5.chr2 I 12 C 0 s chlSab2.chr15 375146 12 - 91754291 aata---aataaagt i chlSab2.chr15 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e papAnu2.chr2 22763 90 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=106224.000000 s hg38.chr3_KI270935v1_alt 87341 58 + 197351 tttagagcaggaatgaaaggaagtaaagtacacttggaagagctgtgttggcaactgg s panTro4.chr3_GL389630_random 48260 58 + 103936 tttagaacaggaatgaaaggaagtaaagtacacttggaagagccgtgttggcaactgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736216 58 + 202140232 tttagagcaggaatgaaaggaagtaaagtacacttggaagagccgtgttggccactgg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 15720 58 - 192599291 tttagagcaggaatgaaaggaagtaaagtacacttggaagagccacgtgggcaactgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 25094 58 + 192460366 tttagagcaggaatgaaaggaagtaaagtacacttggaagagccacgtgggcaactgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 22853 58 - 187378091 tttAGAGCAGGattgaaaggaagtaaagtacacttggaagagccACGTGGGCAACTGG i papAnu2.chr2 I 90 C 0 s chlSab2.chr15 375158 58 - 91754291 tttagagcaggaatgaaaggaagtaaagtacacttggaagagccacgtgggcaactgg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 883898 4660 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=208184.000000 s hg38.chr3_KI270935v1_alt 87399 88 + 197351 agagatccgagtgcctcatctgacccttgacttgggattaatacattggcatgAGATGTGAGCAGTGACTCAAAGTTGCTCAGAAAAA s panTro4.chr3_GL389630_random 48318 88 + 103936 agagatccgagtgcctcatctgacccttgacttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCAGAAAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736274 88 + 202140232 agagatccgagtgccccatctgacccttgacttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCAGAAAAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 15778 88 - 192599291 agagatccaggtgccccatctgacccttgacttgggattaatatattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i rheMac3.chr2 C 0 I 21 s macFas5.chr2 25152 88 + 192460366 agagatccaggtgccccatctgacccttgacttgggattaatatattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 22911 88 - 187378091 AGAGATCCAGGTGCCCCATCTGACCCTTGACTTGGGATTAATATATTGGCATGAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 375216 88 - 91754291 agagatccaggtgccccatctgacccttgacttgggattaatacattggcatgAGATGTGAGCAGTGACTCGAAGTTGCTCCGAAAAA i chlSab2.chr15 C 0 I 21 s calJac3.chr17 888558 88 - 74750902 agagacccaagcgccccatctgacccttgattggggttttatgtatcagcatgAGATCTGAGCAATGACTCAAAGTTGCTCAGAGGAA i calJac3.chr17 I 4660 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1607.000000 s hg38.chr3_KI270935v1_alt 87487 5 + 197351 -AATCT s panTro4.chr3_GL389630_random 48406 5 + 103936 -AATCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736362 5 + 202140232 -AATCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25240 5 + 192460366 -CGTCT i macFas5.chr2 C 0 I 6 s papAnu2.chr2 22999 5 - 187378091 -CGTCT i papAnu2.chr2 C 0 C 0 s calJac3.chr17 888646 5 - 74750902 AAATC- i calJac3.chr17 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 375304 21 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=3713.000000 s hg38.chr3_KI270935v1_alt 87492 10 + 197351 TCCCCCGCTA s panTro4.chr3_GL389630_random 48411 10 + 103936 TCCCCCACTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736367 10 + 202140232 CTCCCCACTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25251 10 + 192460366 GCCCCCGCTA i macFas5.chr2 I 6 C 0 s calJac3.chr17 888651 10 - 74750902 TCACGTGCTC i calJac3.chr17 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=20636.000000 s hg38.chr3_KI270935v1_alt 87502 100 + 197351 TTTAGTACTGCAGCTGGCACCTGCCCTCCCCACGCACTGCAG-----------------------------CTGGCACCTGCCCTCCCCACACCAGTATTTGGTACTGCAGCTGGCACCTGCCCTCCCC s panTro4.chr3_GL389630_random 48421 129 + 103936 TTGAGTACTGCAGCTGGCACCTGCCCTCCCCACGCACTGCAGCTGGCACCTGCCCTCCCCACGCACTGCAACTGGCACCTGCCCTCCCCACACCAGTATTTGGTACTACAGCTGGCACCTGCCCTCCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736377 89 + 202140232 TTTAGTACTGCAGCTGGCACCTGCCCTTCCCAGTCACTGCAG-----------------------------CTGGCACCTGCCCTCCCCAT-----------GCACTGCAGCTGGCACCTGCCCTCCCC i ponAbe2.chr3 C 0 I 4 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e macFas5.chr2 25261 0 + 192460366 C e papAnu2.chr2 23004 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=4163.000000 s hg38.chr3_KI270935v1_alt 87602 48 + 197351 TCTGCTATTTAGTACTGCAGCTGGCACCTGCCCTCCACACAGCAGTAT s panTro4.chr3_GL389630_random 48550 48 + 103936 TCTGCTATTTAGTACTGCAGCTGGCACCTGCCCTCCCCACACCAGTAT i panTro4.chr3_GL389630_random C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e macFas5.chr2 25261 0 + 192460366 C e papAnu2.chr2 23004 0 - 187378091 C e ponAbe2.chr3 199736466 4 + 202140232 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1392.000000 s hg38.chr3_KI270935v1_alt 87650 5 + 197351 TTAGT s panTro4.chr3_GL389630_random 48598 5 + 103936 TTAGT i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 25261 5 + 192460366 TTAGT i macFas5.chr2 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e ponAbe2.chr3 199736466 4 + 202140232 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=13686.000000 s hg38.chr3_KI270935v1_alt 87655 30 + 197351 ACTGCAGCTGGCACCTGCCCTCCCCACACC s panTro4.chr3_GL389630_random 48603 30 + 103936 ACTGCAGCTGGCACCTGCCCTCCCCCCTGC i panTro4.chr3_GL389630_random C 0 T 78 s ponAbe2.chr3 199736470 30 + 202140232 ACTGCAGCTGGCACTTGCCCTCCCCATGCC i ponAbe2.chr3 I 4 C 0 s macFas5.chr2 25266 30 + 192460366 TCTGCAGCTGGCACCTGCCCTCCCCACGTC i macFas5.chr2 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=573.000000 s hg38.chr3_KI270935v1_alt 87685 2 + 197351 AG s ponAbe2.chr3 199736500 2 + 202140232 AG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25296 2 + 192460366 AG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I e panTro4.chr3_GL389630_random 48633 78 + 103936 T a score=1206.000000 s hg38.chr3_KI270935v1_alt 87687 7 + 197351 TATTTAG s panTro4.chr3_GL389630_random 48555 7 + 103936 TATTTAG i panTro4.chr3_GL389630_random T 78 C 0 s macFas5.chr2 25298 7 + 192460366 TGCTCAG i macFas5.chr2 C 0 T 40 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e ponAbe2.chr3 199736502 0 + 202140232 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=2052.000000 s hg38.chr3_KI270935v1_alt 87694 14 + 197351 TACTGCAGCTGGCA s panTro4.chr3_GL389630_random 48562 14 + 103936 TACTGCAGCTGGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736502 3 + 202140232 TAC----------- i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25265 14 + 192460366 TTCTGCAGCTGGCA i macFas5.chr2 T 40 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23004 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=5704.000000 s hg38.chr3_KI270935v1_alt 87708 19 + 197351 CCTGCCCTCCCCACACCAG s panTro4.chr3_GL389630_random 48576 19 + 103936 CCTGCCCTCCCCACACCAG i panTro4.chr3_GL389630_random C 0 I 38 s macFas5.chr2 25279 19 + 192460366 CCTGCCCTCCCCACGTCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 23004 13 - 187378091 CCTGCCCCCGCTA------ i papAnu2.chr2 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e ponAbe2.chr3 199736505 0 + 202140232 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=726.000000 s hg38.chr3_KI270935v1_alt 87727 2 + 197351 TA s panTro4.chr3_GL389630_random 48633 2 + 103936 TA i panTro4.chr3_GL389630_random I 38 C 0 s ponAbe2.chr3 199736505 2 + 202140232 TA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25298 2 + 192460366 TG i macFas5.chr2 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 888661 0 - 74750902 C e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23017 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=422.000000 s hg38.chr3_KI270935v1_alt 87729 1 + 197351 T s panTro4.chr3_GL389630_random 48635 1 + 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736507 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 25300 1 + 192460366 C i macFas5.chr2 C 0 T 40 s calJac3.chr17 888661 1 - 74750902 T i calJac3.chr17 C 0 C 0 e rheMac3.chr2 15866 21 - 192599291 I e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 375304 21 - 91754291 I e papAnu2.chr2 23017 0 - 187378091 C e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1008973.000000 s hg38.chr3_KI270935v1_alt 87730 454 + 197351 TTAGTACTGCAGCTGGCACC-TGCCCTCCCCACGTCAGTGTTCAGGATTCTTTCTCTCTGTTTTTCTTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTGTTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagccgggaatggcttagggccgacctgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgcgacc-tttgtctctcacccacctgtgacctggaagctttctcctggctgcgagttgtcccacatttgcttggcgttgcccggccttttccagactgaaccaatgttcatcttacatgtgttgattgatgtctcatgtctccctaaaacgta------------------t s panTro4.chr3_GL389630_random 48636 455 + 103936 TTAGTACTGCAACTGGCACCCTGCCCTCCCCACGTCAGTGTTCAGGATTCTTTCTCTCTGTTTTTCTTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgctacc-tttgtctctcacccacctgtgacctggaagctttctcctggctgcgagttgtcccacgtttgcttggcgttgcccggccttttccagactgaaccaatgttcatcttacatatgttgattgatgtctcatgtctccctaaaacgta------------------t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736508 472 + 202140232 TTAGTACTGCAGCCGACACC-TGCCCTCCCCACGCCAGTGCTCAGGATTCTTTCTCCCTGTTTTTCTTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATGTTTATTGTTTtgtgaaaggaaaataaatcttgggcccccaaaatcactaaactaaaggggaaagtcaagctgggaatggcttagggtcaaactgccccccattctattcaaaatcacccc-ctgctcactgagatagatgcatatctgattgccttctttggaaaggcccatcagaaactcaaaagaatgctacc-tttgtctctcacccacctgtgccctggaagctttctcctggcttcaagttgtcccacctttgcttggcattgccctgccttttccagactgaacaaatgttcatcttacatatgttgattgatgtctcatgtctccctaaaacatatgaaatcaagctgtgctct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 15887 454 - 192599291 TTAGTTCTGCAGCTGGCACC-TGCCCTCCCCAAGTCAGTGCTCAGGATTCTTTCTCCCTGTTTTTC-TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagagactcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaagctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttacatatgctgattgatgtctcttgtctccctacaatgtg------------------t i rheMac3.chr2 I 21 I 18 s macFas5.chr2 25261 454 + 192460366 TTAGTTCTGCAGCTGGCACC-TGCCCTCCCCACGTCAGTGCTCAGGATTCTTTCTCCCTGTTTTTC-TTTTTTCCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtttctcagtgccgtctttggagagactcatcagaaactccaaagaacgtaaccgtttgtctctcacccacctgtgacctggaagctttctcctggcttcgagttgtgccacctttgcttggcgttgccctgccttttccagaccgaaccaatgttcatcttacatatgctgattgatgtctcttgtctccctacaatgtg------------------t i macFas5.chr2 T 40 I 18 s papAnu2.chr2 23017 455 - 187378091 TTAGTTCTGCAGCTGGCACC-TGCCCTCCCCACGTCAGTGCTCAGGATTCTTTCtccctgtttgtcttttttttccataGTTTTCACCTTTCtataattcacttatttattatatttattgttttgtgaAAGCAGAATAaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaacagCTTAGGGCCAACCTGCCCCCGATTCTATTGAAAATCACCcc-ctgctcactgagatagatgcgtATCTGATTGCCGTCTTTGGagaggctcatcagaaactccAAAGAACGTAACCGTTTGTCTCTCAcccacctgtgacctggaagctttCTCCTGGCTTCGAGTTGTGCCACCTTTGCTTGGCGTTGCCCTGCCTTTTCCAGAccgaaccaatgttcatcttccATATGCTGATTGATGTCTCTTGTCTCCCTACAATGTG------------------T i papAnu2.chr2 C 0 I 18 s chlSab2.chr15 375325 455 - 91754291 TTAGTTCTGCAGCTGGCACC-TGCCCTCCCCACGTCAGTGCTCAGGATTCTTTCTCCCTGTTTGTCTTTTTTTTCCATAGTTTTCACCTTTCTATAATTCACTTATTTATTATATTTATTGTTTtgtgaaaggagaataaatcttgggcccccaaaatcactaagctaaaggggaaagtcaagctgggaatggcttagggccaacctgcccccgattctattgaaaatcacccc-ctgctcactgagatagatgcgtatctgattgccgtctttggagaggctcatcagaaactctaaagaacataactgtttgtctctcacccacctgtgacctggaagctttctcctggctttgtgttgtgccacctttgcttggcattgccctgccttttccagatcgaaccaatgttcatcttacgtatgctgattgatgtctcttgtctccctacaatgtg------------------t i chlSab2.chr15 I 21 I 32 s calJac3.chr17 888662 453 - 74750902 TTAGTACTGCAGCTGGCACC-C-CCCAGCCCATGTCAGTGTTCATGATTCTTTCTCCTTTTTTTA--TTTTTTTCCATAGTTTTCACCTTTCAATAATTCACTTACATATTACATTTATTGTTTtgtgaaaggaaaataaatcttggggccccaaagtcactaagctgaagggaaaagtcaagctgggaaccgcttcgggcagacctgcctcccgttctgtccaaagtcacccctctgctcaccgagataaacgcatatttaactgcctcctttggagaggctgatcagacactcggaagaatgcagccctgtgtctcttctctacctgcgacctggaagcctgctactggcttccagttgtcccacctttgcttggagttgtccctccttttccaggctgaaccaatgttcctcttacatatattgattgatgtctcgtgtctccctaaaatgta------------------t i calJac3.chr17 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=20554.000000 s hg38.chr3_KI270935v1_alt 88184 24 + 197351 ------------------gaccaccttg-gcacatgtcgtcag s panTro4.chr3_GL389630_random 49091 21 + 103936 ------------------gaccaccttg-gcacatgtc---ag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199736980 24 + 202140232 ------------------gaccaccttg-gcacatgtcgtcag i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 16359 24 - 192599291 ------------------gaccaccttg-gcacacgtcgtcag i rheMac3.chr2 I 18 C 0 s macFas5.chr2 25733 24 + 192460366 ------------------gaccaccttg-gcacacgtcgtcag i macFas5.chr2 I 18 C 0 s papAnu2.chr2 23490 14 - 187378091 ------------------gaccaccttg----------gtca- i papAnu2.chr2 I 18 C 0 s calJac3.chr17 889115 43 - 74750902 gaacccaggctgtgccccgcctaccttgggcccaggtcatcag i calJac3.chr17 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 375780 32 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1348224.000000 s hg38.chr3_KI270935v1_alt 88208 625 + 197351 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaacaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTTTtggtaaccatggagggattctgagttgaggtacccctgacctttgacagatctattggtgcttggtagcaccatgagctaaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccatagag-tccctgatctctcaaaacttggtcgtgatctaaagttta-tttgatgtacaactccccctctccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactcttttatggagtttgagcttg---ctcccagcagggaagacaagttcgagtttttttcctgcttcaaggatggtagagagcagtcttcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggctgaaggttaacaaccagctggtctgaatttcttcttcccattagagcagtctgtggtcatatcatttgacttttgttgttgttgtt-ttttctggtctttctctcatcag s panTro4.chr3_GL389630_random 49112 626 + 103936 gacatcctgaggctgtgtcacgggtgtgcatcttcaaccttggaacaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTTTtggtaaccatggagggattctgagttgaggtgcccctgacctttgacagatctattggtgcttggtagcagcatgagctaaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccagagag-tccctgatctctcaaaacttggtcgtgatctaaagttta-tttgatgtacaactccccctccccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactcttttatggagtttgagcttg---ctcccagcagggaagacaagttcgagtttttttcctgcttcaaggatggtagagagcagtcttcagcctgagacccatccctaggtaagtagctgaactgaggttttgtcttggctgaaggttaacaaccagctggtctgaatttcttcttcccattagagcagtctgtggtcatatcatttgacttttgttgttgttgttgttttctggtctttctctcatcag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199737004 625 + 202140232 gacctcctgaggctgtgtcacggacgcgcatcttcaaccttggaaaaataaactttctaaattaactgagacctgtctcagatttggggggttcacaTGTtggtaaccgtggagggattctgagtggagatgcccctgacctttgacagagctattggtgcttggtagcagcacgagctaaccttatggctcaaaccaacaggacaatttgctgaggtctgggagcaccccctccagagag-tccctgatctctcacaacttggtcgtgatctaaagttta-tttgatgtacaactccccctccccttcttttggagttttatttgcttccaagaaggaaggcaagatttcctgggtccgtgatgatggaaggctgacaactcttttatggattttgagcttg---ctcccagtagggaagacaagttcaagtttttttcctgcttcaaggatggtggagagcagtcttcagcctgagacccatccctaggtaagtagctgaattgagattttgtctgggctaaaggttaacaaccagctggtcttaatttcttcttcccattagagcagtctgtggtcacatcatttggctttttttgttgttatt-tgttctggtctttctctcatcag i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 16383 623 - 192599291 gacttcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggagttcacaT-TTTgcagccatggagggattctgagtggagatgcccccgacctttgacagatctattggagcatgatagcaacatgagctaaccttacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgttgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatgatggaaggcaggcaactcttctatggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcttggttaaagcttaacaaccagctggtctgaatttcttcttaccattagggcagtcagtggtcatttcattgggctttttttgttgctgtt-tgttctggactttctctcatcag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 25757 623 + 192460366 gacttcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggagttcacaT-TTTgcagccatggagggattctgagtggagatgcccccgacctttgacagatctattggagcatgatagcaacatgagctaaccctacggctcaaaccaataggacaa-ttgctgaggtctgggagcacccactccagagaa-cccctgatctctcaaaacttggtcgtaatctaaagttta-tttgttgtacaattccccctccccttcttttggagttttatttgcttccaataaggaaggcaagatttcctgggtgcatgatggtggaaggcaggcaactcttctatggagtttgagcttg---ctcccaatagggaagacaagttcgagtttctttcctgcttctaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcattgaggttttgtcttggttaaagcttaacaaccagctggtctgaatttcttcttaccattagggcagtcagtggtcatttcattgggctttttttgttgctgtt-tgttctggactttctctcatcag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 23504 623 - 187378091 gacctcctgaggctgtgtcacggacATGTGTCCtcagccttggcaaaataaaccttctAATTTCACTGACACCTGTCTCAGATTTGGGGCGTTCACAT-TTGGCAGCCATGGAGGAATTCTGAGTGGAGATGCCCCTGACCTTTGACAGATCTATTGGTGCTTGGTAGCAACATGAGCTAACCTTACGgctcaaaccaataggacaa-ttGCTGAGGTCGGGGAGCACCCACTCCAGAGAA-CCCCTGATCTCTCAAAACTTGGTCGTAATCTAAAGTTCA-TTTGCTGTACAATTCCCCCTCCCCTTCTTTTGGAGTTTTATTTGCTTCCAATAAGGAAGGCAAGATTTCCGGGGTGCATGATGATGGAAGGCAGGCAACTCTTCTATGGAGTTTGAGCTTG---CTCCCAATAGGGAAGACAAGTTCGAGTTTctttcctgcttctaggatggtagagAGCAGTCTTCAGCCTGGGACCCATCCCTAGGTAAGTAGCTGCATTGAGGTTTTGTCGTGGTTAAAGCTTAACAACCAGCTGGTCTGAATTTCTTCTTACCATTAGGACAGTCAGTGGTCATTTCAttggactttttttgttgctgtt-tgttctGGACTTTCTCTCATCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 375812 619 - 91754291 gacctcctgaggctgtgtcacgggcatgtgtcctcagccttggcaaaataaaccttctaatttcactgagacctgtctcagatttggggggttcacaT-Ttggcagccatggaggggttctgagtggagatgcccctgacctttgacagatctactggtgcttggtagcaacatgagctaaccttacggctcaaaccaataggacaa-tcgctgaggtctggaagcaccccctccagagaaccccccgatctctcaaaacttggtcgtgatctaaagttta-tctgctgtacaattccccct-cccttcttttggagttttatttgcttccaataaggaaggcaagatttcccgggtccatgacgatggaaggcaggcaagtcttctatggagtttga----g---ctcccaacagggaagacaagttcgagtttctttcctgcttccaggatggtagagagcagtcttcagcctgggacccatccctaggtaagtagctgcatagaggttttgtcttggttaaagcttaacaaccagctggtctgaatttcttcttaccattagggcagtcagtggtcatttcattgggcttttcttgttgctgtt-cgttctggactttctctcatcag i chlSab2.chr15 I 32 C 0 s calJac3.chr17 889158 606 - 74750902 gacctcctgaggctgcgtgacgggtgtgcgtcctcaaccttggcaaaataaagtttctaaattgactgagacctatctcagatatttggggttcacaTTTtggtaaccataaagggattctgagtggagatgcccctgacctttgacaagtctgttggtgcttggtacctgcatgagttaaccttatggttcaaaccaatgggacaatttgctgaggtctgggagcaccccctccaaagaa-tgtctgatctcccaaaatttggtcgtgatctaaagtttattttgctgtacaactc------ccctgtttttggagttttacttgcttccagcaaggaaggcacgatttcctgcgtccatgatgatggaaggcag-caactcctctacggggcttcagcttgaacctctcagcagggaagacaagttggagtcttttt---------aggatggtagagagcagccttcagcctgagactcatccctaggtaagcagctgaactggggttttgtct----taaagtttaacaa-cagttggtcttaatttctcctt-ccatgagagcactcagtgactatatTGTT-GGTTTTTTTTTCTGTTGTT-TGTTCTGGTCTTTCTCTCATCAG i calJac3.chr17 C 0 I 9517 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=196507.000000 s hg38.chr3_KI270935v1_alt 88833 112 + 197351 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgcaaaagagg-----aaaaaa s panTro4.chr3_GL389630_random 49738 112 + 103936 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcctctctaatttggctaaaattccttgcagctgcaaaagagg-----aaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199737629 112 + 202140232 gtttgaccaa--ctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaaacctctctaatttggctaaaattccttgcagctgcaaaaAAGG---AAAAAAAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 17006 116 - 192599291 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggcaaaaattccttgcaactgcaaaaGAGGAAaaaaaaaaa i rheMac3.chr2 C 0 I 2 s macFas5.chr2 26380 114 + 192460366 atttgaccaactctacctgacttggtcaaatccaagtgagaattccaaattatgggtaacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaagagg--aaaaaaaaa i macFas5.chr2 C 0 I 2 s papAnu2.chr2 24127 111 - 187378091 ATTTGACCAACTCTACCTGACTTGGTCAAATCCAAGTGATAATTCCAAATTATGGGTAACAAAGCC-CTCTAATTTGGCTAAAATTCCTTGCAActgcaaaagagg-----aaaaaa i papAnu2.chr2 C 0 I 2 s chlSab2.chr15 376431 111 - 91754291 atttgaccaactctgcctgacttggtcaaatccaagtgagaattccaaattatggataacaaagcc-ctctaatttggctaaaattccttgcaactgcaaaaGAGG-----Aaaaaa i chlSab2.chr15 C 0 I 7898 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1958983.000000 s hg38.chr3_KI270935v1_alt 88945 1622 + 197351 cta-----------aacgaaaa----caaCAAATCACGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTAAAAAACAAACAAACAAAAA---Caacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttgccatctgcgggaccaaaaaa-atctagagaaggcttccaatgactcgagcccctttaaaggatccggaacaaaggggccactcaccccttccagggtgctctgttttctttgtggagtttcaagagtgatgggcggattcttcttaggtctaaagctctgctgtcttcctgtacggcatgacctgacctctttggctttgggggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgagaactacaaagaaggggtggctgagcacagtttacagggaatggtcttggctgtttttttgtttttttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttgggttgtc--tatgtatttgcatgaggaactgaactgttgttgtcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ccgagtactccatagggttcatggcgcctctacttgccagagtttatgtaaagtggaagtaatatggtctttctgcacatttacatt---aaaaaaaaaggagccctgaggttgacctgcaaactgtagagttcctgagtcctcttttttctctagtttcttctctgcctgctttaaatttgctgttatttttctattaagataaaaaacactgtttggatcagatagtttttctgtttgtaaactggtgaatttgtatttatttcatggctaaatttctttttttcttttctttctcttttttttttttctttttttttttttgaggcagagtttcactcttgttgcccaggctggagtgcaatggcgtgatcttgggtcaccacagtctcctcttccctggttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcctggctaattttttgtatttttagtagagatggggtttctccatgttcgtcaggctggtctccaactcctgacctcaggtgatctgcccgcctcggcctcccaaggtgctgggattacaggcgtgagtcaccgcgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgtgtgtgtgtatatatttaaaaggcctttataatttctataattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagactttttctctccatacgttatgatgtaaattttgctattcgattttcacctcagtttccttaaaatgcaaattcaaggctatttagctgacaaccgcttagagtagtaaaacaggttatcaagaattcgaaggtgtggctgggcacggtggctcacgtctgtaatcctagc-atttgggaggctgagccgcaaagatctcttgaggtcagg s panTro4.chr3_GL389630_random 49850 1617 + 103936 cta-----------aacgaaaaaaacCAACAAATCATGTGCTTGGTTTCTGTGTTTGCTTTCTGTCTTAAAAAACAAACAAACAAAAAA--Caacaaatgctctttcacttacttttcttcctccctatacctcctcctgcctttgccatctgcggtaccaaaaaa-atctagagaaggcttctaatgacttgagcccctttaaaggattcggaacaaaggggccactcaccccttccagggtgctcttttttctttatggagtttcaagagtgatgggcggattcttcttaggtctaaagctctg---tcttcctgtatggcatgacgtgacctctttggctttggaggaaccagagatgaccctgcactgtgagaggatttgaccttggcgtgtgtaatggcagacgagaactacagagaaggggtggctgagcacagtttacagggaatggtcttggctgtttTTTT-TTTTTttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttgggttgtc--tatgtatttgcatgaggaactgaactgttgttgtcataggtaaatgagagactgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ccgagtactccatagggttcatggtgcctctacttgccagagtttatgtaaagtggaagTAATATGGTCTTTCTGCATGTttacatt---aaaaaaaaaagagccctgaggttgacctgcaaactatagagttcctgagtcctcttttttctctagtttcttctctgcctgctttaaatttgctgttatttttctgttaacataaaaaacactgtttggacctgacagtttttctgtttgaaaactggtgaatttgtatttatttcatggctatatttctttttttcttttctttctctctttttttttt------tttgttttgaggcagagtttcactcttgttgcccaggatggagtgcaacggcgtgatcttgggttaccacagtctccgcttccctggttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcctggctaattttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctccaactcctgacctcaggtgatctgcccgcctcagcctcccaaggtgctgggattacaggcgtgagtcaccgcgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgcgtgtgtgcatatatTTAAAAGGCCTTTATAatttctataattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagactttttctctccatacgttatgatgtaaattttgctattcgattttcacctcagtttccttaaaatgcaaattcaaggctatttagctgacaaccgcttagagtagtaaaacaggttatcaagaattcgaaggtgtggctgggcacggtggctcgcgtctgtaatcctagc-atttgggaggctgagccgcaaagatctcttgaggtcagt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199737741 1600 + 202140232 CTA-----------AACCCAAAAAACCAACAAATCATGTGCTTGGTTTCTGCGTTTGCTTTCTGTCTTAAAAAACGAACCAAAAAAAA---Caagaaatgctctttcacttacttttctttctccctatacctcctgccccctttgccatctgcagtaccaaaaaa-atctagagaaggcttctactgactcgagcccctttaaaggattcagaacaaaggggccattcaccccttctggggtgctctgttttctttgtggagtttcaagagtgatgggcggattcttcctagatctaaagctctg---tcttcctgtatggcatgacctgaccactttggctttgggggaaccagagatgaccctacactgtgagaggatttgaccttggcgtgtgtaatggcagatgagaactacaaagaaagggtggctgagcacagtttacagggaatggtCTTGGctgg-------gttttttttttttctcttctaggaagctgtgatttaaggatcctaattctagttcagagatgcatcctaaagggtcttctctattgctttttctcccaaaatcaatctccgtttgggttgtctgtgtgtatttgcatgagtaactgaactgttgttgtcataggtaaatgagagattgagttttctcagctccaaagagaaagggcgtttgctcctcccag-------ctgagtactccacagggttcatggtgcctctacttgccagagtttatgtaaagtggaagTAATATGGTCTTTGTGCACATttacatt---aaaaaaaaaagagccctaaggttgacctgcaaacaatagagttcctgagttctcttttttctctattttcttctctgcctgctttaaatttgctgttatttttctattaagataaaaaacactgtttggatctgacagtttttctgttggtaaactggtgaatttgtatttatttcatggctacatttctttttttcttttctttctcttttttttt-------------------gacagagtttcactcttgttgcccaggctggagtgcaatggcgtgatcttgggtcaccacaatctccacctccctggttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcctggctaattttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcaaactcctgacctcaggtgatctggccgccttggcctcccaaggtgctgggattacaggcatgagtcatcacgcccagctttcatggctaaatttctgaagtaaaagctataggatctttgtgtgtgtATATATACTTAAAAGGCCTTTATAatttctataattttatgtttaattggcaattaaatctgttttaatttccctccagcacaccagagtttttctctccatatgttatgatgtaaattttgctattcgattttcacctcagttttcttaaaatgcaaattcaaggctatttagctgacaactgcttagagtagtaaaacaggttatcaagaatttgaaggtgtggctgggtgcagtggctcacatctgtaatcctagctctttgggaggctgagccgcaaagatctcttgaggtcagg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 17124 1612 - 192599291 ctaaactaaccaacaaccaaacaaacaaac-aaccaTGCACTTGGTTTCTGTGTTTGCTTTCTGTCTT--Aaaaaaaaccaacaaaaaaaccaacaaatgctctttcacttacttttcttccaccctatacctcctttcccccttgccatctacagtaccaaaaaacacctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttcggggtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggattggaccttggcgtgtgtaatggcagacgagaa------agaagtggtggctgag--cagtttGCAGGGAATGGtcttggctgg-----------ttttttttcctcttctaggaagccgtgatgtaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgtgcatttggatgaggaactgaactgttgttttcataggtaaatgagaaattgagttttctcagctccgaagagaaagggcgtttgccccacccagcATGAACCcgagtactccatcag--ttctggtgcctctacttgccagagtttatgtaaagtggaTGTAATATGGTCTTTGTGCACATttacatt-aaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagaattcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgttatttttctattaagataaaaaacactgtttggatccgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttctttttttcttttctttttctttctttttttt------------ttttgagacagtttcactcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaaacgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcccggctaattttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaggtgctgggataacaggcatgagccactgtgcccagctttcatggctaaatttttgaagtaaaagctataggatctttgtgtgtgtatgtatatTTAAAAGGCCTTTATAatttctataattttatgtttaattggcaattaaatctgttttaatttccctctagcacaccagactttttctctccataccttatgatgtaaactttgctatttgattttcacctgagtttctttaaaatgcaaattcaacgctatttagctgacaactgcttagagaagtaaaacaggctatcaagaattcaaaggtGTggccaggtgcagtggctcacgcccgtaatcctagcactttgggaggctgagtcgcgaagatctcttgaggtcagg i rheMac3.chr2 I 2 N 0 s macFas5.chr2 26496 1613 + 192460366 ctaaacTaaccaacaaccaaacaaacaaac-aaccaTGCACTTGGTTTCTGTGTTTGCTTTCTGTCTT-AAaaaaaaaccaacaaaaaaaccaacaaatgctctttcacttacttttcttccaccctatacctcctttcccccttgccatctacagtaccaaaaaacacctagagaaggcttctaatgact--aatccctttaaaggattcagtacaaaggggccactccccgctttcggggtgctctgttttctttgtggagtttcaagagtgataggcagattcttcttaggtctaaagctctg---tcttcctgtatggcatgacctgacctctttggctttgggggaaccagagatgaccttgcactgtgagaggattggaccttggcgtgtgtaatggcagacgagaa------agaagtggtggctgag--cagtttGCAGGGAATGGtcttggctgg-----------ttttttttcctcttctaggaagccgtgatgtaaggatcctaattctagttcagagatgcattctaaagggtcttctctattgctttttctcccaaaatgaatctcagtttggcttgtctgtgtgcatttggatgaggaactgaactgttgttttcataggtaaatgagaaattgagttttctcagctccgaagagaaagggcgtttgccccacccagcATGAACCcgagtactccatcag--ttctggtgcctctacttgccagagtttatgtaaagtggatgtaatatggtctttgtgcacatttacatt-aaaaaaaaaaaaagaccctaaggttgacctgcaaacgacagaattcctgagttctcttttttctctattttcttctctgcctgctttcaatttgctgttatttttctattaagataaaaaacactgtttggatctgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttctttttttcttttctttttctttctttttttt------------ttttgagacagtttcactcttgttgcccaggctggagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaaacgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcccggctaattttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaggtgctgggataacaggcatgagccactgtgcccagctttcatggctaaatttttgaagtaaaagctataggatctttgtgtgtgtatgtatatTTAAAAGGCCTTTATAatttctataattttatgtttaattggcaattaaatctgttttaatttccctctagcacaccagactttttctctccataccttatgatgtaaactttgctatttgattttcacctgagtttctttaaaatgcaaattcaacgctatttagctgacaactgcttagagaagtaaaacaggctatcaagaattcaaaggtGTggccaggtgcagtggctcacgcccgtaatcctagcactttgggaggctgagtctcgaagatctcttgaggtcagg i macFas5.chr2 I 2 C 0 s papAnu2.chr2 24240 1600 - 187378091 cta-----------aaccaaacaaacaaa--aaccatgcacttggtttctgtgtttgctttctgtctt---aaaaaaaccaacaaaaaaaccaacaaatgcTCTTTCACTTACTTTTCTTCCACCCTATACCTCCTTCCCCCCTTGCCATCTGCAGTACcaaaaaaaatctagagaaggCTTCTAATGACT--AATCCCTTTAAAGGATTCAGTACAAAGGGGCCACTCTCTGCTTTCCAAGtgctctgttttctttgtggagtTTCAAGAGTGATAGGCAGATTCTTCTTAGGTCTAAAGCTCTG---TCTTCCGGTATGGCATGACCTGACCTCTTTGGCTTTGGGGGAACCAGAGATGACCTTGCACTGTGAGAGGATTTGACCTTGGCGTGTGTAATGGCAGACGAGAA------AAAAGCGGTGGCTGAG--CAGTTTGCAGGGAATGGTCTTGGctgg-----------ttttttttcctcttctaggAAGCCGTGATTTAAGGATCCTAATTCTAGTTCAGAGATGCATTCTAAAGGGTCTTCtctattgctttttctcccaAAATGAATCTCAGTTTGGCTTGTCTGTGTGCATTTGGATGAGGAACTGAACTGTTGTTTTCATAGGTAAATGAGAGATTGAGTTTTCTCAGTTCCGAAGAGAAAGGGCGTTTGCCCCACCCAGCATGAACCCGAATACTCCGTCGG--TTCTGGTGCCTCTACTTGCCAGAGTTTATGTAAAGTGGATGTAATATGGTCTTTGTgcacatttacattaaaaaaaaaaaaaagaccctaagGTTGACCTGCAAACGACAGAGTTCCTgagttctcttttttctctattttcttctctgcctgctttcaatttgctgttatttttctattaagataAAAAACACTGTTTGGATctgacagtttttttgtttgcaaactggtgaatttgtatttatttcatggctaaatttctttttttcttttctttttctttctttttttt------------ttgagacagagtttcactcttgttgcccaggctgtagtgcaatggagtgatcttggctcactgcaacctccgtctccctggttcaagcgattctcttgcctcagcctcccgagtagctgggattacaggcatgcaccaccatgcccggctaattttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgatccgcctgcctcagcctcccaaggtgctgggattacaggcatgagccatcgtgcccagctttCATGGCTAAATTTCTGAAGTAAAAGCTATAggatctttgtgtgtgtatgtatatttaaaaggcctttataatttctataattgTATGTTTAATTGGCAATTAAATCTGTTTTAATTTCCCTCTAGCACACCAGACTTTTTCTCTCCATACCTTATGATGTAAACtttgctatttgattttcacctgagtttctttaaaatgcaaattcaacGCTATTTAGCTGACAACTGCTTAGAGAAGTAAAACAGGCTATCAAGAATTCAAaggtgtggccaggtgcagtggctcacgcccgtaatcctagcactttgggaggctgagtcgcgaagatctcttgaggtcagg i papAnu2.chr2 I 2 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I e chlSab2.chr15 376542 7898 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=171357.000000 s hg38.chr3_KI270935v1_alt 90567 225 + 197351 agttcaaaaccatcttggccaacatgttgaaaccccgtctctactaaaaatacaaaaaaaa-ttagccagatgtggtggcaggtgcctataatcccagctactcaggaagctgaggcaggagaatcacttgaagccaggaggcagagtttgcagtgagtcgagatcaagccattgcactcca-gcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa s panTro4.chr3_GL389630_random 51467 226 + 103936 agttcaaaaccatcttggccaacatgttgaaaccccgtctctactaaaaatacaaaaaaaaattagtcaggtgtggtggcaggtgcctgtaatcccagctactcaggaagctgaggcaggagaatcacttgaagccaggaggcagaggttgcagtgagtcaagatcaagccattgcactcta-gcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199739341 225 + 202140232 agttcaaaaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaaa-ttagccaggtgtggtgtcaggtgcctataatcccagctactcaggaagctgaggcaggagaatcgcttgaagcaaggagacagaggttgcagtgagtcgagatcaagccattgcactcca-gcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 28109 221 + 192460366 agttcaaaaccatcctggccaacatggtgaaaccctgtct---ctaaaaatacaaaagaa--ttagccgggcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcaggagaatggcaggaacccgggaggtggagcttgcagcgaactgagatccggccactgcactcca-gcctgggcaacagagcgagactccgcctcaaaaaaaaaaaaaga i macFas5.chr2 C 0 I 7377 s papAnu2.chr2 25840 222 - 187378091 agttcaaaaccattctggccaacatggtgaaaccccgtct---ctaaaaatacaaaagaa--ttagccgggcgtggtggcaggcacctgtaatcccagctactcaggaggctgagccaggagaatggcaggaacccgggaggtggagcttgcagcgaactgagatccggccactgcactccatgcctgggcaacagagcgagactctgcctcaaaaaaaaaaaaaga i papAnu2.chr2 C 0 I 7250 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I e chlSab2.chr15 376542 7898 - 91754291 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=42602.000000 s hg38.chr3_KI270935v1_alt 90792 174 + 197351 aaaa-----gtaaaaaagaatttgaaggtgtaag-aaaaaagctctttatgaatctataagatgaacttctttcagcatacctaatacatctgtgtatttatgtgttgt-----tgtgtacacagtgttttgctactgaaaatatataaaagagctctaattaattggcttaagaaaataaaagc s panTro4.chr3_GL389630_random 51693 179 + 103936 aaaaagaaagtaaaaaagaatttgaaggtgtaag-aaaaaagctctttatgaatctataagatgaacttctctcagcatacctaatacatctatgtatttatgtgttgt-----tttgtacacaatgttttgctactgaaaatatataaaagagctctaattaattggcttaagaaaataaaagc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199739566 178 + 202140232 aa-------gtaaaaaagaatttgaaggtgtaagaaaaaaagctctttatgaatctataagatgaacttctttcagcatacctaatacatctatgtatttatgtgttgtgtacacatgtacacaatgttttgctactgaaaatatataaaagggctctaattacttggcttaagaaaataaaagc i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I e chlSab2.chr15 376542 7898 - 91754291 I e macFas5.chr2 28330 7377 + 192460366 I e papAnu2.chr2 26062 7250 - 187378091 I e nomLeu3.chr11 120822326 8191 + 123690457 I a score=1659.000000 s hg38.chr3_KI270935v1_alt 90966 2 + 197351 ac s panTro4.chr3_GL389630_random 51872 2 + 103936 ac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199739744 2 + 202140232 ac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120830517 2 + 123690457 AT i nomLeu3.chr11 I 8191 C 0 s macFas5.chr2 35707 2 + 192460366 AT i macFas5.chr2 I 7377 C 0 s papAnu2.chr2 33312 2 - 187378091 at i papAnu2.chr2 I 7250 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I e chlSab2.chr15 376542 7898 - 91754291 I a score=7896.000000 s hg38.chr3_KI270935v1_alt 90968 3 + 197351 ttg s panTro4.chr3_GL389630_random 51874 3 + 103936 ttg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199739746 3 + 202140232 ttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120830519 3 + 123690457 TTg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 1369 3 + 111706 TTg i rheMac3.chrUn_JH291127 N 0 C 0 s macFas5.chr2 35709 3 + 192460366 TTg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 33314 3 - 187378091 ttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 384440 3 - 91754291 TTg i chlSab2.chr15 I 7898 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 889764 9517 - 74750902 I a score=68639.000000 s hg38.chr3_KI270935v1_alt 90971 27 + 197351 gctgggtgcagtggctcatgcctgtac s panTro4.chr3_GL389630_random 51877 27 + 103936 gctgggtgcagtggctcacgcctgtac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199739749 27 + 202140232 gctgggtgcagtggctcacgcctgtac i ponAbe2.chr3 C 0 I 7739 s nomLeu3.chr11 120830522 27 + 123690457 gctgggcgtggtggctcacgcctgtaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 1372 27 + 111706 gccgggcgcggtggctcaggcctgtca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 35712 27 + 192460366 gccgggcgcggtggctcaggcctgtca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 33317 27 - 187378091 gccgggcgcggtggcataggcctgtca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 384443 27 - 91754291 gccgggcgcagtggctcaggcctgtca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 899281 27 - 74750902 gctgggcccggtggctcatgcctgtaa i calJac3.chr17 I 9517 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I a score=722571.000000 s hg38.chr3_KI270935v1_alt 90998 277 + 197351 tcccagcactttgggaggctgaggtaggtagatcacctgaggtcaggagtttgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagcccgacgtggtggtgcgcgcctataatcccagctactccagaggctgaggcaggagaattgttggatcccgggaggaagaggtttcattgagctgagatctcattactgtacactccagcctgggtgacagagcaagactccatctcaa-----aaaaaaa---aaaag--------------aaGCTAG s panTro4.chr3_GL389630_random 51904 274 + 103936 tcccagcactttgggaggctgaggtgggtagatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtgatggtgcgcgcctgtaatcccagctactccagaggctgaggcaggagaattgtttgatcccgggaggaagaggtttcactgagctgagatctcattactgtacactccagcctgggtgacagagcaagacaccatctcaa-----aaaaaaa---aaaaG-----------------CTAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199747515 287 + 202140232 tcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatgcaaaaattagccgggcgtggttgtgcacatctgtaatcccagctactccggaggctgaggcaggagaattgcttgataccgggaggaagaggtttcattgagctgagatctcactactgtacactccagcctgtgtgacagagcgagactccatctcaa-----aaaaaaa---aaaaa----aaaaaaaaaaaaGCTAG i ponAbe2.chr3 I 7739 C 0 s nomLeu3.chr11 120830549 272 + 123690457 tcccagcactttgggaggccaaggcaggcggatcacatgaggtcaggagttcgagacaagcctggccaacatggtgaaaccccgtctctactaaaaatataaaaattatccgggcgtggtggcacatgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgatcccaggaggaagaggtttcaatgagctgagatctcactactgtacactccagcctgggcaacagagcaagactccatgtcaa-----aaaaaaa---aaG-------------------CTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 1399 278 + 111706 tcccagcactttgggaggccaaggcgggcgaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaaaa-tagctgggcgtggtggcg-gcgcctgtaatcccaaccgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcagtgagctgagatctcactgctgtacactccagcctgggcgacagggcgagactccatctcaa-----aaacaaa---caaaa-----------aaaaaGCTAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 35739 279 + 192460366 tcccagcactttgggaggccaaggcgggcgaatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaaaattagctgggcgtggtggcg-gcgcctgtaatcccaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcagtgagctgagatctcactgctgtgcactccagcctgggcgacagggcgagactccatctcaa-----aaacaaa---caaaa-----------aaaaaGCTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 33344 275 - 187378091 tcccagcactttgggaggccaaggcgggcggatcgcctgaggtcaggagttcaagacaagcctggccagcacggtgaaaccccgtctctaccataaatacgaaaattagccgggcgtggtggcg-gcacctgtgatcccaactgctcgggcggctgaggcaggagaatcgcttgaacccaggaggaagaggtttcggtgagccgagatctcactgctgtacactccagcctgggcgacagggcgagaccccatctcaa---------aaa---aaaaa-----------aaaaagctag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 384470 285 - 91754291 tcccagcactttgggaggccaaggcgggcggatcgcctgaggtcaggagttcaagacaagcctggccagcatggtgaaaccccgtctctaccataaatacgaaaattagctgggcatggtggcgcacgcctgtaatcccaactactcgggtggctgaggcaggagaattgcttgatcccggggggaagaggtttcagtgagctgagatctcactgctgtacactccagcctgggcgacagagcgagactccatctcaaaaaaaaaaaaaa---aaaaa-----------aaaaaGCTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 899308 285 - 74750902 tcccagcatttttggaggccaaagcaggc-aatcgc-tcaggtcaggaggttgagaacagcctggccaacatggtgacattttgt-------aaatataccaaaattagccaggcgtggtggcaggcatctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggtttcagtgagctgagatctcactactgtgcactccagcctgggcgacagagcgagactccatctcaa-----aaaaaaaccccaaaaccaaaaacaaCAGGAACCTAG i calJac3.chr17 C 0 C 0 e mm10.chr16 65405221 4922 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I a score=1332470.000000 s hg38.chr3_KI270935v1_alt 91275 477 + 197351 TGATTCCATATCTTCAAATCAAATTTCAGTGGAGTGTTTACCGGGCAAGGAAGGCA-GGGGGGTCAGCTTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCTGCACATTTGTG----------------------ATCACCTGGTCACACACCTGGGCAGGAGGCTGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGGTACCCGCGAGAGACAGCCAGCAGTTCTGTGGAG--CAGCGGTGGCC--GGCTAG----GATGGGCTGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGGGGTCTCTGGGAGCTCTGCAGGTAAGGAGGCCTAGAAGGGCCTGGTGGGCCTCTCCCCTAGTAGGGCTCTGGGAGTGAATTTCAGTATGAGCCACCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAACCACAGTGCTACTTGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC s panTro4.chr3_GL389630_random 52178 476 + 103936 TGATTCCATATCTTCAAATCAAATTTCAGTGGAGTGTTTACCAGGCAAGGAAGGCA-GGGGGGTCAGCTTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCTGCACATTTGTG----------------------ATCACCCGGTCACACACCTGGGCAGGAGGCTGC----CCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGGTACCCGCGAGAGACAGCCAGCAGTTCTGTGGAG--CAGCGGTGGCC--GGCTAG----GATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGGGGTCTCTGGGAGCTCTGCAGGTAAGGAGGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGGGGGGCTCTGGGAGTGAATTTCAGTATGAGCCACCCTTCATGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAATGAACCACAGTGCTACCTGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199747802 475 + 202140232 TGATTCCATATCTTCAAATCAAATTTCAGTGGAGTGTTTACCGGGCAAGGAAGGCA-GGGGGGTCAGCTTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCAGCACATTTGTG----------------------ATCACCTGGTCACACACCTGGGCAGGAGGCTGC----CCCTCCTCCCT-GTTTGAGGAAGCAGGAAAAGGTACCCGTGAGAGACAGCCAGCAGTTCTGTGGAG--CGGCGGTGGCT--GGCTAG----GATGGGCTGTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGGCGTCTCTGGGAGCTCTGCAGGTAAGGAGGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGTGGGGCTCTGGGAGTGAATTTCAGTATGAGCCCCCATTCATGGGCAAGGGCAGGCTCTCTTGGGTTGATGATAATGAACCACAGTGCTACCTGTGAAGTGCTATTATTGTTGATAAAGAGTGTGCAAATGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120830821 476 + 123690457 TGATTCCATATCTTCAAATCAAATTTC-----AGTGTTTACTAGGCAAGGAAGGCAGGGGGGGTCAGCCTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCTGCACATTTGTG----------------------ATCACCTGGCCACACACCTGGGCAGGAGGCTGCCCCTCCCTCCTCCCTGGTTTGAGGAAGCAGGAAAAGGTACCCGTGAGAGACAGCCAGCAGTTCTGTGGGG--CAGCAGTGGCC--AACTAG----GATGGGCTGTCTCTGGGGTCTGACTCTGCTTCTTTTCTTCTTCTGCTGGGAGGTTGGGGTCCCTGGGAGCTCTGCAGGTAAGGAAGCC-AGAGGGGCCTGGTGGGCCTCTCCCCTAGTGGGGCTCTGGGAGGGAATTTCAGTATGAGCCACCCTTCACGGGCAAGGGCAGGCTCTCTCGGGTTGATTATAAGGAACCACAGGGCTACCTGTGAAGTGCTATTATTGATGATAAAAAGTGTGCAAATGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 1677 472 + 111706 TGATTCCACATCTTCAAATCAAATTTCAGCGGAGTGTTTACTGGGCAAGCAAGGCA--GGGGGTCAGCTTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCTGCACATTTGTG------TGGCCACATCCTGGCAACTAGCCAGTCACACACCTCGGCAGGAGGCGGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGGTACCCGT--GAGACGGCCAGCAGTTCTGC--AG--CGGCGGTGGCC--GGCTAG----GATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGCGGTGTCTGAGATCTCTGCAGGTAAGGAGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACCTGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 36018 472 + 192460366 TGATTCCACATCTTCAAATCAAATTTCAGCGGAGTGTTTACTGGGCAAGCAAGGCA--GGGGGTCAGCTTG----CTGACAGCCTCAACCTGCCAGCCCTCAGCCTGCACATTTGTG------TGGCCACATCCTGGCAACTAGCCAGTCACACACCTCGGCAGGAGGCGGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGGTACCCGT--GAGACGGCCAGCAGTTCTGC--AG--CGGCGGTGGCC--GGCTAG----GATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGCGGTGTCTGAGATCTCTGCAGGTAAGGAGGCC-AGAGGGG-CTGGTGGGCCTCCCCCCTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGGTGACAAGGAACCACAGTGCTACCTGTGAAGTGCCATCGTTGATGATAAAGAGTGTGCGGATGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 33619 472 - 187378091 tgaTTCCACATCTTCAAATCAAATTTCAGCGGAGTGCTTACTGGGCAAGCAAGGCA--GGGGGTCAGCTTG----CTAACAGCCTCAACCTGCCAGCCCTCAGCCTGCATATTTGTG------TGGCCACATCCTGGCAACTAGCCAGTCACACACCTTGGCAGGAGGCGGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGGTACCCGT--GAGACGGCCAGCAGTTCTGC--AG--CAGCGGTGGCC--GGCTAG----GATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTCTTCTGCTGGGAGGTTGCGGTGTCTGAGATCTCTGCAGGTAAGGAGGCC-AGAGGGG-CTGGTGGGCCTCCCCCGTCGTGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGGCAAGGGCAGGCTCTCTTGGGTTGATGACAAGGAACCACAGTGCTACCTGTGAAGTGCCATCGTTGATGATAAACAGTGTGCGGATGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 384755 471 - 91754291 TGATTCCACATCTTCAAATCAAATTTCAGCCGAGTGTTTACTGGGCCAGGAAGGCA---GGGGTCAGCTTG----CTGACAGACTCGACCTGCCAGCCCGCAGCCTGCACATTTCTG------TGGCCACATCCTGGCAACTAGCCAGTCACACACCTCGGCAGGAGATGGC----CCCTCCTCCCTGGCTTGAGGAAGCAGGAAAAGGTACCCGT--GAGACAGCCAGCAGTTCTGC--AG--TGGTGGTGGCC--GGCTAG----GATGGGCTCTCTCTGGGGTCTGGCTCTGCCCCTTTTCTTATTCTGCTGGGAGGTTGCGGTGTCTGAGATCTCTGCAGGTAAGGAGGCC-AGAGGGG-CTGGTGGGCCTCTCCCCTCATGGGGCTCTGGGAGTGAATTTCAGTGT--------------GGACAAGGGCAGGCTCTCTTGGGTTGATGACAAGGAACCACAGTGCTACCTGTGAAGTGCCATCGTTGATGATAAACAGTGTGTGGATGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 899593 469 - 74750902 TGATTTCATATCTTCAAATCAAATTTCAGAGGAGAAATTACTGGGCAAGGAAGGCAGGGGGTGTTAGCTTG----CTGACAGCCCCAACCT-----------GCCTGTACGTTTCTGATCATCTGGCTACGTCTCGGAAACTCCCCAGTCACACACCTGGGCAGGAGGCTGC----CCCTCCTCTCCGGTTTAAGGAAGCAGGAAAAAG-------------CGGCCGGCCG-TCTGCGGAGACAGGCAGCGCCC-TGGCTAG----GATGGGCTCTCTCTGGGGTCTGGTTCTGCCCCTTTTCTTTTTCTGCTGGGAGGCTGGGGTCTCTGGGAGTGCTGCAGGTAAGGAGGCC-AGACTTC-CTGGTGGGCTTCTTCCCTAGTGGGGCTCCGGGAGTGAATTTCAGTATGGGCAGCCTTTCCTGGGC-AGGGTAGGCTCTC--AGGATGATTAGAATGAGCCACAGTGCTACACATAAAGTGCTATTACTGTT----CAGAGTGTGCAAATAAT i calJac3.chr17 C 0 I 6 s mm10.chr16 65410143 423 - 98207768 TGATGCCATATCTTCAAATCAGAG----------------------AGGCAAGGCA-TGGGAGTCAGGGTGGGGAGTGGGACCATGAACCTGCTG----TCAGCCTGCACATTTGTGGTCACCCGGCTGCCTCCTGGAACCTACCCAGT--CACACCTGGGCAGTCGTCTGC----CCCTCCTCCCGGGGTTGAGGAAGCAGGAAAGGGTGGTGAGGAGAGACAGCAGGCAGGTCCGGCAGA--CAGCGGTGGTCAGGGCCAGGCACGATGGGCTCTGTCTGGGGCCTGGCTGTGCCCCTCCTTGTCTTCTGCTGGAAGGTTGGCGTCAGTGTGAGCTCTCCAGGTAAGGAA--C-AGGACAG-CCCCCGGGGATCCTCCCTGGTGGAGCTCTGGG------TTTCAGTGC--------------TGGCAAAGACAGCTCTTTGTGGG-------CAAGGGA---------------------GACATTTTTGTTAAT------TGTATTAATGGC i mm10.chr16 I 4922 C 0 e canFam3.chr33 29041967 5697 + 31377067 I a score=-1797.000000 s hg38.chr3_KI270935v1_alt 91752 1 + 197351 -A s panTro4.chr3_GL389630_random 52654 1 + 103936 -G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748277 1 + 202140232 -G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120831297 1 + 123690457 -G i nomLeu3.chr11 C 0 I 116 s rheMac3.chrUn_JH291127 2149 1 + 111706 -G i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 36490 1 + 192460366 -G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34091 1 - 187378091 -G i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385226 1 - 91754291 -G i chlSab2.chr15 C 0 C 0 s mm10.chr16 65410566 1 - 98207768 C- i mm10.chr16 C 0 C 0 e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900062 6 - 74750902 I a score=110.000000 s hg38.chr3_KI270935v1_alt 91753 2 + 197351 -GT s panTro4.chr3_GL389630_random 52655 2 + 103936 -GT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748278 2 + 202140232 -GT i ponAbe2.chr3 C 0 I 172 s nomLeu3.chr11 120831414 2 + 123690457 -GT i nomLeu3.chr11 I 116 C 0 s calJac3.chr17 900068 2 - 74750902 -GT i calJac3.chr17 I 6 C 0 s mm10.chr16 65410567 2 - 98207768 GG- i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 2150 0 + 111706 C e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 385227 0 - 91754291 C e macFas5.chr2 36491 0 + 192460366 C e papAnu2.chr2 34092 0 - 187378091 C a score=4968.000000 s hg38.chr3_KI270935v1_alt 91755 7 + 197351 GTGAGTG s panTro4.chr3_GL389630_random 52657 7 + 103936 GTGAGTG i panTro4.chr3_GL389630_random C 0 I 1117 s ponAbe2.chr3 199748452 7 + 202140232 GTGAGTG i ponAbe2.chr3 I 172 C 0 s nomLeu3.chr11 120831416 7 + 123690457 GTGAGCG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 900070 7 - 74750902 ATCAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65410569 7 - 98207768 AGGAATA i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 2150 0 + 111706 C e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 385227 0 - 91754291 C e macFas5.chr2 36491 0 + 192460366 C e papAnu2.chr2 34092 0 - 187378091 C a score=30207.000000 s hg38.chr3_KI270935v1_alt 91762 41 + 197351 --TAAGCGTGCATGGCGCTGCAGTACACACTAATCAACCATGA s panTro4.chr3_GL389630_random 53781 41 + 103936 --TAAGCGTGCATGGCACTGCAGTACACACTAATCAACCATGA i panTro4.chr3_GL389630_random I 1117 C 0 s ponAbe2.chr3 199748459 41 + 202140232 --TAAGTGTGCATGGCGCTGCAGTACACACTAATCAACCATGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120831423 41 + 123690457 --TAAGCGTGCCTGGCGCTGCAGTACACACTAATCAACCATGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 900077 41 - 74750902 --TAAGCGTGCATGGCGCCGCAGCACACACAAATAAACCGTGA i calJac3.chr17 C 0 T 56 s mm10.chr16 65410576 21 - 98207768 GACGAGTGTGC-TGGC-TGGCAG-------------------- i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 2150 0 + 111706 C e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 385227 0 - 91754291 C e macFas5.chr2 36491 0 + 192460366 C e papAnu2.chr2 34092 0 - 187378091 C a score=711546.000000 s hg38.chr3_KI270935v1_alt 91803 283 + 197351 CGATGTGTGTGAGTGTAAGCGTG-----CCTGGCGCTGCAGTACACGCTAATCAACCATGACGCTGCCATCGTAAGGGATGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGGGCACGGAGCGGGGGTGCAGGGAGGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCCAGTTTATTACCTAGCATGGATTTCCTTCAAAATACAGATTTCGTGTGAAAAGTCCAACTGCCACAAACTGCTTGGGAA s panTro4.chr3_GL389630_random 53822 283 + 103936 CGGTGTGTGTGAGTGTAAGCATG-----CCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAAGGGGTGGCTGAGAGTTTGTCTTTATGAACGTGGGACAGTAAGTGGAGCACGGAGCGGGGGTGCAGGGAGGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCCAGTTTATTACCTAGCATGGATTTCCTTCAAAATACAGATTTCGTGTGAAAAGTCCAACTGCCACAAACTGCTTGGGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748500 283 + 202140232 TGGTGTGTGTGAGTGTAAGTGTG-----CCTGGCACCGCAGTATACACTAATCAACCATGACGCTGCCATCATAAGGGGTGGCTGAGAGTTTGTCTTTATGAATGTGGGAGAGTAAGTGGGGCATGGAGCGGGGGTGCAGGGAGGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCAAGTTTATTACCTAGCATGGATTTCCTTTAAAATACAGATTTTGTGTGAAAAGTCCAATTGCCACAAACTGCTTGGGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120831464 283 + 123690457 CGGTGTGTGTGAGCGTAAGGGTG-----CCTGGCGCTGCAGTACACACTAATCAACCATGACGCTGCCATCGTAAGGGGTGGCTGAGAGTTTGTCCTTATGAACGTGGGAGAGTAAGTGGGGCACAGAGCCGGGGTGCAGGGAGGTGCCAGCTGGTGATCATTGTGCAGAAAGCTGAAGAATGTGGCTTAACAAGATTCTGACTCCTCCAAGTGTATTACCTAGCATGGATTTCCTTCAAAATACAGATTTCGTGTGAAAAGTCCAACTGCCACAAACTGCTTGGGAA i nomLeu3.chr11 C 0 T 90437 s rheMac3.chrUn_JH291127 2150 249 + 111706 ----GTGTGTGAGTGTAAGCCTG-----CCTGG----------------------------CGCTGCCATGGTGAGAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGTGGGGAG-GTGGGTGCAGGGAGGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAATACAGATTCCGAGTGAAAAGTCCGACTACCACAAACTGCTTGGGAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 36491 249 + 192460366 ----GTGTGTGAGTGTAAGCCTG-----CCTGG----------------------------CGCTGCCATGGTGAGAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGTGGGGAG-GTGGGTGCAGGGAGGTGCCAGCTGGCAATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAATACAGATTCCGAGTGAAAAGTCCGACTACCACAAACTGCTTGGGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34092 249 - 187378091 ----GTGTGTGAGTGTAAGCCTG-----CCTGG----------------------------CGCTGCCATGGTGAGAGGTGGCTGAGAGTCTGCCTTTAAGAACGT-GTAGAGTGagtggggcagggag-gtgggtgCAGGGAGGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTCGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAATACAGATTCCGAGTGAAAAGTCCGACTACCACAAACTGCTTGGGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385227 249 - 91754291 ----GTGTGTCAGTGTAAGCCTG-----CCTGG----------------------------CGCTGCCATGGTGAGAGGTGGCTGAGAGTCTGCCTTTATGAACGT-GGAGAGTGAGTGGGGCGGGGAG-GTGGGTGCAGGGAGGTGCCAGCTGGCGATCATTGTGCAGAAAGCTGAAGAATGTGGCTCAACAAGATTTGGACTCCTCCAAGTTTATTACCTGGCATGGATTTCCTTCAAAATACAGATTCCGAGTGAAAAGTCCGACTACCACAAACTTCTTGGGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 900062 258 - 74750902 TGGTTTGTATCAGTGTAAGCGTG-----CATGGCGCCGCAGCACACACAAATAAACCGTGACGCTGCCATTGCACGGGGTTGCTG-----------TTA-GAATGT-------------GGGCGAGGAAGCGGGGTGCAGGGAGGGGCCGGCTGGTCATCATTTTGCAGACAGCTGAAGAATGCGGCTTAACAACATTCTAACTCCTCGAAGTTTATTACCTGGCATGGATCTCCTTCAAAATACAGATTTCGTGCGAAAAGGTCGACTGTCACAGACTGCTGGGGAA i calJac3.chr17 T 56 C 0 s mm10.chr16 65410597 217 - 98207768 ----ATGGGTCAGCTTACACATGGTGGCCCTGT----------------------------GGCCATCACTGTAAGGGA-GTCTGGGAGTCACTCTTTAGTCATG--GGATAGTGGG--GTGGAGGGAG-GAGGGGCTTGGGAGATGCCAGCTGGTGATCATTTTA-----------------------------GCTCTGCTCCCTCCAACATCGTTACCTAGCCCAGCTGTTCTTTGAAATTTGCCTTTTGAATGAAAAGT----TTGTCACAAACTGCTTGGGCG i mm10.chr16 C 0 C 0 e canFam3.chr33 29041967 5697 + 31377067 I a score=320098.000000 s hg38.chr3_KI270935v1_alt 92086 99 + 197351 GGGTGGATGCT--GACAGGCAGGGCTTTTGTGAAAGACGGGAATGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACATACA----TTAAAAAA s panTro4.chr3_GL389630_random 54105 99 + 103936 GGGTGGATGCT--GACAGGCAGGGCTTTTGTGAAAGACGGGAATGAACCCTGACCTGTCGCTAATAGGAGTTGTGCCAAACTCATCACATACA----TTAAAAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748783 99 + 202140232 GGGTGGATACT--GAGAGGCAGGGCTTTTGTGAAACATGGGAATGAACACTGACCTGTCGCCAACAGGAGTTGTGCCAAACTCATCACATACA----TTAAAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741310 99 + 123690457 GAGTGGATGCT--GAGAGGCAGGGCTTTTGTGAAAGACGGGAACGAACCCTGACCTGTCGTTAATAGGAGTTGTGCCAAACTCATCACATACA----TTAAAAAC i nomLeu3.chr11 T 90437 C 0 s rheMac3.chrUn_JH291127 2399 99 + 111706 GGGTGGATGCT--GAGAGGCAGGGCTTTTGTGAAAGATGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA----TTAAAAAA i rheMac3.chrUn_JH291127 C 0 I 341 s macFas5.chr2 36740 98 + 192460366 GGGTGGATGCT--GAGAGGCAGGGCTTTTGTGAAAGATGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA----TTAAAAA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34341 99 - 187378091 GGGTGGATGCT--GAGAGGCAGGGCTTTTGTGAAAGACGGGAAGGAACCCTGACCTGTCGTTAATAGGAGCTGTGCCAAACTCATCACATACA----TTAAAAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385476 99 - 91754291 GGGTGGATGCT--GAGAGGCAGGGCTTTTGTGAAAGACGGGAACGAACCCTGACCTGTCGCTAATAGGAGCTGTGCCAAACTCATCACATACG----TTAAAAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 900320 100 - 74750902 GGGTGAATGCT--GAGAGGCAGGGCTTCTGAGAAAGACGGGAACTAACACTGATCTGTGACTGAT---ACTTGTGTCAAACTAATCACATACATTTTTTAAAAAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65410814 99 - 98207768 -GGGAGATTCTGAGAGAGGCA-GACTTTTCTGAAAGATGGGAGCTAACCGTGATCTGTTACTAACTGGCACTGTGCCAAACCTATCACACACA----CTTTAAaa i mm10.chr16 C 0 C 0 e canFam3.chr33 29041967 5697 + 31377067 I a score=2500.000000 s hg38.chr3_KI270935v1_alt 92185 3 + 197351 TAG s panTro4.chr3_GL389630_random 54204 3 + 103936 TAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748882 3 + 202140232 TAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741409 3 + 123690457 TAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36838 2 + 192460366 -AG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34440 1 - 187378091 --g i papAnu2.chr2 C 0 C 0 s calJac3.chr17 900420 3 - 74750902 GAG i calJac3.chr17 C 0 I 93 s mm10.chr16 65410913 3 - 98207768 tag i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 2498 341 + 111706 I e canFam3.chr33 29041967 5697 + 31377067 I e chlSab2.chr15 385575 0 - 91754291 C a score=1875.000000 s hg38.chr3_KI270935v1_alt 92188 4 + 197351 AAAA s panTro4.chr3_GL389630_random 54207 4 + 103936 AAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748885 4 + 202140232 AAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741412 4 + 123690457 AAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36840 4 + 192460366 GGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34441 4 - 187378091 gggg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385575 4 - 91754291 GGGG i chlSab2.chr15 C 0 C 0 s mm10.chr16 65410916 4 - 98207768 ataa i mm10.chr16 C 0 I 1607 e rheMac3.chrUn_JH291127 2498 341 + 111706 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900423 93 - 74750902 I a score=17151.000000 s hg38.chr3_KI270935v1_alt 92192 16 + 197351 GGA-----TTTATTTTTTTTT s panTro4.chr3_GL389630_random 54211 16 + 103936 TGA-----TTTATTTattttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748889 21 + 202140232 GGATTTATTTTATTTAtttat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741416 16 + 123690457 GGA-----TTTATTTAtttat i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 36844 16 + 192460366 GGA-----TTTGttttatttt i macFas5.chr2 C 0 I 1239 s papAnu2.chr2 34445 16 - 187378091 gga-----tttgttttacttt i papAnu2.chr2 C 0 I 37 s chlSab2.chr15 385579 16 - 91754291 GGA-----tttattttatttt i chlSab2.chr15 C 0 I 27 e rheMac3.chrUn_JH291127 2498 341 + 111706 I e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900423 93 - 74750902 I a score=11999.000000 s hg38.chr3_KI270935v1_alt 92208 14 + 197351 T----------AGTTCTATGCTCC s panTro4.chr3_GL389630_random 54227 24 + 103936 ttttttagagcagttctatgctcg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748910 24 + 202140232 ttttttagagcagttctaggttcg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741432 24 + 123690457 ttgtttagagcagttctaggttca i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 34498 14 - 187378091 ----------cagTTCTAGGTTTG i papAnu2.chr2 I 37 C 0 s chlSab2.chr15 385622 14 - 91754291 ----------cagttctaggtttg i chlSab2.chr15 I 27 C 0 e rheMac3.chrUn_JH291127 2498 341 + 111706 I e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900423 93 - 74750902 I e macFas5.chr2 36860 1239 + 192460366 I a score=34035.000000 s hg38.chr3_KI270935v1_alt 92222 20 + 197351 CTCTAAACCTCGAGTGGAGA s panTro4.chr3_GL389630_random 54251 20 + 103936 ctctaaacctcgagtggaga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748934 20 + 202140232 ctctaaacctccagtggaga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741456 20 + 123690457 ctctaaacctcgagtggaga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 2839 19 + 111706 ctctaaaccttgagtggag- i rheMac3.chrUn_JH291127 I 341 C 0 s papAnu2.chr2 34512 20 - 187378091 CTCTAAACCTTGAGtggaga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385636 20 - 91754291 ctctaaaccttgagtggaga i chlSab2.chr15 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900423 93 - 74750902 I e macFas5.chr2 36860 1239 + 192460366 I a score=146912.000000 s hg38.chr3_KI270935v1_alt 92242 66 + 197351 ggccgggcgtggtggctcacacctgtaatcccagcattttgggaggctgaggtgggtggatcacct s panTro4.chr3_GL389630_random 54271 66 + 103936 ggccgggcacggtggctcacacctgtaatcccagcattttgggaggccgaggtgggcggatcacct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199748954 66 + 202140232 ggttgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggtgggcggatcacct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741476 66 + 123690457 ggctgggtgcagtggctcacacctgtaatcccagcattttgggaggctgaggcgggcggatcacct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 2858 66 + 111706 ggccgggtgcagtggctcacacctgtaatcccagcattttgggaggccaaggcgggcagatcacct i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 34532 66 - 187378091 ggccgggtgcagtggctcacacctgtaatcccagcattttgggaggccaaggcgggcggatcacct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385656 66 - 91754291 ggccaggtgcagtggctcacacctgtaatcccagcattttgggaggccaaggcgggtggatcacct i chlSab2.chr15 C 0 C 0 s calJac3.chr17 900516 66 - 74750902 ggtcaggggcagaggctaacgcttgtaatcccagcacttttagaggccggggcatgtggatcacct i calJac3.chr17 I 93 C 0 e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e macFas5.chr2 36860 1239 + 192460366 I a score=597425.000000 s hg38.chr3_KI270935v1_alt 92308 227 + 197351 gaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatac-aaaattagccgggggtggtagcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatcgcacccttgcgctctggc--------ctgggcaacaaaagtgaaactatgttt--caaaaaaaaa------------aa s panTro4.chr3_GL389630_random 54337 225 + 103936 gaggtcaggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatat-aaaattagccgggggtggtagcaggtgcctgtaatcccacctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggagtttgcagtgagctgagatcgcaccattgcactctggc--------ctgggcaacaagagtgaaactatgttt--caaaaaaaaa-------------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199749020 228 + 202140232 gaggttgggagttcgagactagcctgaccaacatggagaaaccccatctctactaaaaatac-aaaattagccaggtgtggtagcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagctgacattgcaccactgcactgcagc--------ctgggcaacaaaagtgaaactctgttt--caaaaaaaaa-----------aaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741542 228 + 123690457 gaggtcgggagttggagaccagcctgaccaacatggagaaaccccgtctctactaaaaatac-aaaattagccgggtgtggtagcaggtgcctgtaatcccagctacttgggaggctgacgcaagagaattgcttgaacctgggaggtgggggttgcagtgagctgagatcttgccattgcactctggc--------ctgggcaacaaaagtgaaactctgttt--caaaaaaaaa-----------aga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 2924 238 + 111706 gaggtcaggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagcgagccaagatcacgccactgcactccagc--------ctgggcaac-agagtgaaac--tttttaaaaaaaaaaaaacaaaaaaacaaaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 38099 236 + 192460366 gaggtcaggagtttgagaccagcctgaccaacatggagaaaccccgtccctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttggagcgagccaagatcacgccactgcactccagc--------ctgggcaac-agagtgaaac--tgttt--aaaaaaaaaaacaaaaaaacaaaa i macFas5.chr2 I 1239 C 0 s papAnu2.chr2 34598 224 - 187378091 gaggtcaggagtttgagaccagcctgaccaacatggagaaaccccgtccctactaaaaatac-aaaattagcgggatGTGGtagcagctgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgcactctagc--------ctgggcaac-agagtgaaac--tgttt--aaaaaaaa------------aaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385722 234 - 91754291 gaggtcaggagtttgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatac-aaaattagcgggatgtggtagcagctgcctgtaatcccagctactcaggaggctgaggtaggagaattgcttgaacctgggaggtggaggttgcagtgagccaagatcacgccactgcactccagcccactgcactgggcaac-agagtgaaac--tgttt--aaaaaaaaaa----------aaaa i chlSab2.chr15 C 0 C 0 s calJac3.chr17 900582 228 - 74750902 gaggtctggaattcgagaccagcctgaccaacccggtgaaaccccatctgtactaaaaatgcaaaaattagccggccatggtggcgcgtgcctgtaatgccagctacttgggaggctgaggcgggagaatcacctgaacccaggaggtggaggttgcggtgagccgtgattgcgtcactgcactccagc--------ctgctcaaaaagaatgaaacttcatct--caaaaaaata-----------aa- i calJac3.chr17 C 0 I 22 e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I a score=642653.000000 s hg38.chr3_KI270935v1_alt 92535 295 + 197351 aGCTGCAGTGGAGAGTCTGGAGTTcccatccccaccactcacagcctcccccatcatcagcgtcccccaccagagtggcacatttgataggactgaggaacctactttgatgcatcattatcatacaTtgtatttttaatcctcacaacggccctgcaagatcggccctgtttttaccaccCCCCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTCTGGGCATCCAGTAACAACTCCTCGGAGCCAGAATCTGACTCCTCACAGGCCTGAGCACTGCACCCCGTGGCCTC s panTro4.chr3_GL389630_random 54562 294 + 103936 -gctgcagtggagagtctggagttcccatccccaccactcacagcctcccccatcatcagcatcccccaccagagtggcacatttgttaggactgaggaacctactttgacccatcattatcatacaTTGTATTtttaattctcacaacggccctgcaagatcggccctgttcttaccaCCCACCACCTCCACTGCTTTAAGGGTGAGGCCACTGTGCTTCTGGGCATCTAGTAACAACTCCTCGGAGCCAGGATCTGACTCTCCACAGGCCTGAGCACTGCACCCCATGGCCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199749248 294 + 202140232 aactggagtgaagagtatggaattcccatccccaccactcacagcctcccccatcatcaacgt-ccccaccagagtggcacatttgttaggactgaggaatctactttgacacatcattatcaTACATTATATTTTTAATCCTCACGATGACCCCACAAGATCGGCCCTGTTCTTACCACCCCCCACCTCCACTGCTTTAAGGACGGGGCCACTGTGCTTCTGGGGATCCAGTAACAACTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACCCCGCGGCCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120741770 293 + 123690457 aactggagtggagagtatggagttcccatccccaccactcacagcctcccccatcatcgacgtcccccaccagagtggcacatttgttaggaccgaggaatctactttgacacagcattatcatacaTTATATTTTTAACCCTCACAATGGCCCTCCAAGATCCGCCCTGTTCTTACCACCCCCCACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTCTGGGGATCCAGTAAGAACTC--CGGAGCCAGGATCTGACTCCACACAGGCCTGAGAACTGCACTCCGCGGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 3162 293 + 111706 aacttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgtttgttaggactgaggaacctactttgatgcatcattatcatacattatatttttaaccctcacaatggccctacaagat-gaccctgctctgaccaccccgga-ctccactgctttaaggatgaggccactgtgcttctggggatccagtgactCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCTCAGCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 38335 293 + 192460366 aaCttgagcagagagtatcgagttcccatccccaccacttacagcctcccccatcatcaacatcccccaccagagtggcacgtttgttaggactgaggaacctactttgatgcatcattatcaTACATTATATTTTTAACCCTCACAATGGCCCTACAAGTT-GACCCTGTTCTGACCACCCCCGA-CTCCACCGCTTTAAGGATGAGGCCACTGTGCTTCTGGGGACCCAGTGACTCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCTCGGCCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 34822 295 - 187378091 aaattgagcagagAGTATCGAGTTCCCATCCCCACCACTTACAGCCTCCCCCATCATcgacatcccccaccagagtggcacGTTTGTTAGGATTGAGGAACCTACTTTGATGCATCATTAtcatacattatatttttaacccTCACAATGGCCCTACAAGATGGGCCCTGTTCTTACCACCCCCGACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTCTGGGGATCCAGTGACTCCTCCTCGGAGCCAGGATCTGACTCCACACAGGCCTGAGCACTGCACGCCGCGGCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 385956 289 - 91754291 aacttgagcggagagtatcgagttcccatccccaccacgtacagcctctgc---catcgacatcccccaccagagcagcacgtctgttaggactgaggaacctactttgatgcatcattatcGTATA--GTATTTTTAACCCTCACAATGGCCCTACAAGAT-GACCCTGTTCTGACCACCCCCGACCTCCACTGCTTTAAGGATGAGGCCACTGTGCTTCTGGGGATCCAGTGACGACTCCTCGGAGCCAGGCTCTGACTCCACACAGGCCTGAGCGCTGCACGCCGCGGCCTC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29041967 5697 + 31377067 I e calJac3.chr17 900810 22 - 74750902 I a score=2920266.000000 s hg38.chr3_KI270935v1_alt 92830 1210 + 197351 CTGCCTGTGCTCACCGTGGCCTGGTCTGCGCTGCACGT-------------GTCCCGttagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtcacagggc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACTGAGGGGCTGGGCTGGGATTTGCTGTATTCGAGAAGACCCCCTT------------------------------GGACCC---------------GAGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAGAAAGGACACCCCGGGGCTCCTGGATAAGCCAGAAAATGTGCCAGGGGA-------AGTCGGGCTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAAAGAAATGATCTCAGG-CTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGCCGCACTGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTATACTGCCTGGGGGTGCAGCCCGCACTCCTCACTATAGTCAGATCAACTATGCGTGCTTTCCAGTGGCCTGGGAGAGGACTCCAT-AGGGAGGGATGCTTA------CCTTGTGGGCTTTGGAATATaag------ccctttcaccttctccgctggtcctcatcacgttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtctagagactggcctggctagtaggaggctgagtcaggatttgaaccagcagatcatctgaccccggagccagtCGTGGGCGGCACAGCGGGAGCTGCAACCGAGGCTCTTGACTCCTGCGTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGTTGGGGACCTGGGGCCCCATCCTGATGCCCTGGGGAGA------GGTGCTAGGCCCCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCTGGGTAAAGACCATCTCAAACCCTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACCTTTGGGCTTCCAGCTGTGTAGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-TTTGATCCTTTTCCTTCCAAGACtgggattaccagataaaacacagggcatccagttacatttgaatttcaggtaacaa----------ttttttt- s panTro4.chr3_GL389630_random 54856 1206 + 103936 CTGCCCGTGCTCACCATGGCCTGGTCTGCGCTGCACGT-------------GTCCCGttagctccaccttacaggtgcggaaatgcaggcttggagctgagagacttggccagggtcacagggc---------agagagcagattctccaactcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACCGAGGGGCTGGGCCGGGATTTGCTGTATTTGAGAAGACCCCCCT------------------------------GGACCC---------------GAGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAGAAAGGACACCCCGGGGCTCCTGGAT----CGGAAAATGTGCCAGGGGA-------AATCGGGCTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTAGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGG-CTTGAAGTGGGGAGAACAAACTGTATTATGAAGGCAGACGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGCCGCACCGGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTACACTGCCTTGGGGTGCAGCCCGCACTCCTCACTATAGTCAGATCGACTATGCGTGCTTTCCAGGGGCCCGGGAGAGGACTCCAT-GGGGAGGGATgctta------ccttgtgggctttggaatataag------ccctttcaccttctccgctggtcctcaccacgttggcaaggcaggtat----tgtgaccctgttttctgaggtgaggacatggaggctgggaggggtctagagactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtCGTGGGCGGCACAGCGGGAGCTGCAACCGAGGCTCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGCTGGGGACCTGGGGCCCCATCCTGACATCCTGGGGAGA------GGTGCTAGGCCTCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCTGGGTAAAGACCATCTCAAACCCTGTGCCAGGGGAGGTCAGACTCCAAGAGCGCCACCTTTGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-TTTGATCCTTTTCCTTCCAAGACtgggattaccagataaaacacagggcatccagttacatttgaatttcaggtaacaa----------ttttttt- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199749542 1212 + 202140232 CTGCCTGTGCTCACCATGGCCTGGTTTGCGCTGCACGT-------------GTCCCGTGAGctccactttgcaggtgcggaaatgcaggcttggagctgagagacttggccagggtcacagggc---------agagagcagattctccacctcagggtcccaagtccacacgctttcctctccacca----gattTGAAGATTGTACCAGGAGAGCCGCAGTGTTCCAGAGCTACCGAGGGACTGGGTCGGGCTTTGCTGTATTTGAGAAGACCCCCCT------------------------------GGACCC---------------GAGAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAGAAAGGACACCCCGGGGCTACCGGACAAGCCGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGATGAACAGTTCCTGCAAAAGTGAGATTTGTGTGTGCAGCTGGGCCGCACCAGACCAGGGATGAGAGTGGGTGCCCGGGACTCGCCTACACTGCCTGGGGGTGCAGCCCGCACTCCTCACTACAGTCAAATCGACTGTGCGTGCCTTCCAGTGGCTCGGGAGAGGACTCCAG-GGGGAGGGATgctta------ccttgtgggctttggaatataag------ccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtaaccctgttttctcaggtaaggacatggaggctgggaggggtctagagactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtAGTGGGCGGCACAGCGGGAGCTGCAACCAAGGCTCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGCCAGGGACCTGGGGCCCCATCTTGACACCCTGGGGAGA------GGTGCTAGGCCTCTTT-TGGGTCTATGGGCTACTTTTGGGCCAGTGGAGCCCGGTAAAGACCATCTCAAACCGTGTGCCAGGGGAGGTCAGACTCCAAGAGCACCACCTTCGGGCTTCCAGCTGTGTGGGCTGGACAAAGAAGGCTCAGAG-AATTAGGGGGTTTGTA-TTTGATCCTTTTCCTTCCAAGGCtgggattaccaaatgaaacacagggcatccagttacatttgaatttcaggtaacaa---------tttttttt- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120742063 1211 + 123690457 CTGCCTGTGCTCACCGTGGCCTGGTTTACGCTGCACGT-------------GTCCCGTGAGctccaccttacaggtgcag-aatgcaggcttggagctgagagacttggccagggtcacagggc---------ggagagcagattctccagctcagggtcccaagtccacacgctttcctctccacca----GATTTGAAGACTGTACCAGGAGAGCCGCAGTGTTCCGGAGCCACCGAGGGGCTGGGCCGGGCTTTGCCATATTTGAGGAGACCCCCCT------------------------------GGACCC---------------GAGAGACTGTGGGCTTGGGGAGCACGAGGAGGTTTCACAGCAGAAAGGACACCCCGGGGCTCCTGGACAAGCCGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGCAGAAACTGTATTATGAAGGCAGACAAACAGTTCCTACAAAAGTGAGATTTGTGTGTGCAGCTGGGCCGCACCGGAGCAGCGATGAGAGCAGGCGCCCAGGACTCGCCGACACTGCCTGGGGGTGCAGCCCGCACTCCTCACTATGGTCAAATCCACTGTGTGTGCTTTCCAGTGGCCCGGGAGAGGACTCCATGGGGGAGGGATGCTCA------CCTTGTGGGCTTTGGAATAtaag------ccctttcaccttctccact-gtcctcaccaccttggcaaggcagctat----tgtgaccctgttttctcaggtgaggacgtggaggctgggaggggtctggatactggcctggctagtaggaggccgagtcaggatttgaaccagcagatcatctgaccccagagccggtAGTGGGCGGCACAGCAGGAGCTGCAGCCGAGGCTCTTGACTCCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAAGCAGCCGGGGACCTGGGGCCCCATCCTGACGCCCTGGGGAGA------GGTGCTAGGCCTCTTT-TGGATCTATGGGCTACTTTTGGACCAGTGGAGCCGGGTAAAGACCATCTCAAACCGTGTGCCAGGAGAGGTCAGACTCCAAGAGCTCCACCTTCGGGCTTCCAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAG-AATTAGGGGGTTCGTA-TTTGATCCTTTTCCTTCCAAGACtgggattaccagataaaatacagggcatccagttacatttgaatttcaggtaacaa---------tttctttt- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 3455 1191 + 111706 CTGCCTGTGCTCACCGTGGCCTGGTG-----TGCACAT-------------GTCCCGttagctccaccttacggatgcagaaatgcaggcttggagctgagagacttggccagggtcacagggc---------agagagcaggttctccaactcagggtccccagtccacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCTCC-------------------------------GGACCC---------------AAAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAAAACTGACACCCCGGGGCTCCTGGAGAAGCTGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGC-AAAGTGAGATTTGTGTGTGCAGCTGGGCTGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGGGGTGCAGCCCGTACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgctta------ccttgtgggctttggaatataagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtctagagactggccgggctagtaggaggccgag--------------------tcatccggccccagagccagCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA--------GCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAGCCAGC-GGGGACCTGGGGCCCCGTCCTGATGCCCTGGGGAGA------GGTTCTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAAACCATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACCTTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-TTTGATCCTTTTCCTTCCACGACtgggattactacataaaacacagggcatccagttacatttgaatttcaggtaacaattttttt-ttttttttt- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 38628 1192 + 192460366 CTGCCTGTGCTCACCGTGGCCTGGTG-----TGCACAT-------------GTCCCGttagctccaccttacggatgcagaaatgcaggcttggagctgagagacttggccagggtcacagggc---------agagagcaggttctccaactcagggtccccagtccacctgctttcctctccacca----gattgGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCTCC-------------------------------GGACCC---------------AAAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAAAACTGACACCCCGGGGCTCCTGGAGAAGCTGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGC-AAAGTGAGATTTGTGTGTGCAGCTGGGCTGCAATGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGGGGTGCAGCCCATACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCCGGGGAGAGGACTCCATGGGGGAGGGATgctta------ccttgtgggctttggaatataagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacatggaggctgggaggggtctagagactggccgggctagtaggaggccgag--------------------tcatccggccccagagccagCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA--------GCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAGCCAGC-GGGGACCTGAGGCCCCGTCCTGATGCCCTGGGGAGA------GGTTCTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAAACCATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACCTTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-TTTGATCCTTTTCCTTCCACGACtgggattactacataaaacacagggcatccagttacatttgaatttcaggtaacaatttttttgttgttgttg- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 35117 1169 - 187378091 CTGCCTGTGCTCACCGTGGCCTGGTG-----TGCACAT-------------GTCCCGTTAGCTCCACCTTACAGATGCAGAAATGCAGGCTTGGAGCTGAGAGACTTGGCCAGGGTCACAGGGC---------AGAGAGCAGGTTCTGCAACTCAGGGTCCCCAGTCCACCTGCTTTCCTCTCCACCA----GACTGGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAGCTCCCGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCCCC-------------------------------GGACCC---------------AAAAGGCTGTGGGCTTGGGGAGCATGAGGAGGTTTCACAGCAAAAGTGACACCCCGGGGCTCCTGGAAAAGCTGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCCAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGATGAACAGTTCCTGC-AAAGTGAGATTTGTGTGTGCAGCTGGGCTGCAGTGGACCAGTGGTGGCAGCGGGTGCCCAGGACTCGCC--CGCTGCCTGGGGGTGCAGCCCGTACTCCTCACTAGAGTCACATTGACTGTGTGTGCTTTCAGGTGGCCGGGGAGAGGACT--------------------------CCTTGTGGGCTTTGGAATATAAGGGttttccctttcaccttctccACTGGTCCTCACCACCTTGGCAAGGCAGGTAT----TGTGACCCTGTTTTCTCAGGTGAGGACATGGAGGCTGGGAGGGGTCTAGAGACTGGCCGGGCTAGTAGGAGGCCGAG--------------------TCATCCGGCCCCAGAGCCAGCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA--------GCTGCCTCG----TCATTCCCT-------GAAGTCCACAGGACAACCAGC-GGGGACCTGGGGCCCCATCCTGATGCCCTGGGGAGA------GGTTCTAGGTCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACTATCTCAAACCATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACCTTTGGGCTTCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-TTTGATCCTTTTCCTTCCACGACTGGGATTACTACATAAAACACAGGGCatccagttacatttgaatttcaggtaagaattttt---ttttttttt- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 386245 1183 - 91754291 CTGCCTGTGCTCA------CCTGGTG-----TGCACAC-------------GTCCcgttagctccaccttacagatgcagaaatgcaggcgtggagctgagagacttggccagggtcacaggac---------agagagcaggttctccagctcagggtccccagtccacctgctttcctctccacca----gaTTGGAAGATGGTACCAGGAGAGCCGCAGTGTTCCAGAACTACTGAGGGGCTGGGCCGGGCTTTGCTGTATTTGAGAAGACCCCCT-------------------------------GGACCC---------------AAAAGGCTGTGGGCTTGGGGAGCAGGAGGAGGTTTCACAGCAAAAATGACACCCCAGGGCTCCTGGAAAAGCTGGAAAATGTGCCAGGGGA-------AGTCAGGCTCCAAGGGCACCACTCT--GGGCTTCTAGCTGTGTGGGCT-------------------------------GGACCAAGAAGGCTCAGAGAAATGATCTCAGGCCTTGAAGTGGGGAGAAGAAACTGTATTATGAAGGCAGAGGAACAGTTCCTGC-AAAGTGAGATTTGTGTGTGCAGCTGGGCTGCACGGGACCAGTGGTGACAGCGGGTGCCCAGGACTCGTC-ACACTGCCTGGGGGTGCAGCCCGTACTCCTCACTATAGTCACATCGACTGTGCGTGCTTTCAGGTGGCTGGGGAGAGGACTCCATGGCGGAGGGATGCTTA------CCTTGTGGGCTTTGGAATATaagggttttccctttcaccttctccgctggtcctcaccaccttggcaaggcaggtat----tgtgaccctgttttctcaggtgaggacacggaggctgggaggggtctagagactggccgggctagtaggaggccgag--------------------tcaTCCGGCCCCAGAGCCAGCAGTGGGCAGCACAGCGGCAGCTGCAACCAAGGA--------CCTGCCTCG----TCATTCCCT-------GAGGTCCACAGGACAACCAGC-GGGGACCTGGGGCCCCATCCTGACGCCCTGGGGAGA------GGTTCTAGGCCTCTTTGGGGGTCTATGGGCTACTTTTGGACCAGTGGAGCTGGGTAAAGACCATCTCAAACCATGTGCCAGGGGAGGTCAGACTCCAAGAGTGCCACCTTTGTGCTCCTAGCTGTGTGGGCTGGACCAAGAAGGCTCAGAGAAATGAGGGGGTTTGTA-TTTGATCCTTTTCCTTCCACGACtgggattactacgtaaaacacagggaatccagttacatttgaatttcaggtaacaatttt----ttttttttt- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29047664 1189 + 31377067 ctgcacgttttacacttggattgatttactcttcacatccctgtgaaacaggtgcccttagctccattttacagatgagaaagtgcaggctgggagccaggagacctggccagggtgacatggttggaaagcaggagagcagggattcagactcaggccccaaagaacacgcaccttcctctctgccaGTGTGATTTGAGGAATAGACCAGGAGAGCTGCCACATTCTAGAGTTGT--GCGGGCTGCG-TGGGCTTTGCTGCGTCTGAGAAGACCCCTGCTGGGTAGGAGACTTGGGTGGGGGGGCTGTGAGACCCCAGGGTGGGGGGGTGAAGAGGTTAGGGGC-TGGGAGGCATGAGGAGGTTTCACAG-AAGGATGATATTGTGGGGTTCCCGGATAAAGAAGAAAATACTTCAGGGGAGGTGGGTGGTCAGACCCCAAGAATACCTCTGTTGGGGCCTTAGCTTGTGTGGGCTGACACAGAAAGGCTTTGATTCCACCGGGTGGGGATTGAGGAAGCTCAGAGAAATGG-CTTGGGCTTTGAAGTGGGGAGAAGGAAGTATA--------------------TTCCCGTAGAAGCACGATT--CGTGAACAGCTGAG------------GAGGGTGAAGG-------CCGTGACTCACCTGATACGCATGTGGGGCCAGCCTGACCTTCTGAAGGT--------------TGTGTGCTGTCAATGCCTCTTTGAGAGGACACGGCTGGGGAGGGGTGCTTAGTGGCCCCTTGCAGGCTTTGGAATATAAG-ACTTTCCCGTTCCCCTTCCCCTCAGGCCCTCACCAC---GGCAAGGCAGGTCTGGTAGGTAACCCTGGTTCACGAG----------GGCGGCCCGGAGG------------GGCCTGGCCGGTAGGACGCGGAGTCAGGATTTGAGCCAG----TCATTGGACTCcagagc---tagttggcaacaggcctagggccggagcccagtctttcgcttcctggtccagtgctctttcactgcTCAGGGAGAGACATGGGAGGACAAACTGAGGACCTGGGGCCC-----TGACAGGTAGAGGTGACCACATGGTCTCGTACTTCCGT-TGGGTCCTTGGG-TACTTTGGGGCCAGTAGACCTCAGTAACGACCATCTCAAACCAT-------------TGGAACCCCAAAAG--------------------------------------------------------GAGGGTTTATATTTTGATTCTTTTCCTTCCAAGAGGAAGGTTCCTGGATAAAACCTGGGACATCCACTTACATTTGAAtttt---taaaaa--------tattttattt i canFam3.chr33 I 5697 I 238 e mm10.chr16 65410920 1607 - 98207768 I e calJac3.chr17 900810 22 - 74750902 I a score=916611.000000 s hg38.chr3_KI270935v1_alt 94040 393 + 197351 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcgtttatctgaaatgcaagttcaaatttaaccgagtaccctgtatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGGCCCACTCACAGGGAGAGCCCGATCTCCCTCTAGACAGGGGAGG----CCCCCTTTCTCAGGCCAGAAAAGATcttgtagtaaactactcaagaggctgaggcaggaggatcgcttgagcccaggaattcaagacctgcctgggcaacagagcaagaccctgtctctagggaagataTCCTACCGTAGCCTCCCTCGGGG-ACTCCCATTCCTCCCACCTCAGGGCCAGTCAAGGGAACAGGCCTCTGCTC s panTro4.chr3_GL389630_random 56062 393 + 103936 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcgtttatctgaaatgcaagttcaaatttaaccgagtaccctgtatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGGCCCACTCACAGGGAGAGCCCGATCTCCCTCTAGACAGGGGAGG----CCCCCTTTCTCAGGCCAGAAAAGATCTTGTAGTAAACTACTCAAgaggctgaggcaggaggatcgcttgagcccaggaattcaagacctgcctgggcaacagagcaagaccctgtctctggggaaaaTATCCTACCGTAGCCTCCCTCGGGG-ACTCCCATTCCTCCCACCTCAGGGCCAGTCAAGGGAACAGGCCTCTGCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199750754 393 + 202140232 taagtgtaagtatgtagccaatattgcatgagaaatacccatgctaaaaagttattcg---------tcatttatctgaaatgcaagttcaaatttaaccaagtaccctgtatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGCCCTACTCACAGGGAGAGCCCGATCTCCCTCTAGACAGGGGAGG----CCCCCTTTTTCAGGCCGGAAAAGATcttgtagtaaactacacaagaggctgaggcaggaggatcgcctgagcccaggaattcaagacctgcctgggcaacagagcaagaccctgtctctggggaaaaTATCATACCGTAGCCTCCCTCAGGG-ACTCCTGTTCCTCCCACCTCAGGGCCAGTTAAGGGAACAGGCCTCTGCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120743274 391 + 123690457 taagtgtaagtatgtagccaatattgcatgagaaatactcatgctaaaaagttattcg---------tcatttatctgaaatgcaagttcaaatttaaccgagtaccctgtatttttatttgctaaatctagaaactctCTCCAAGAGGCTCCTTGGCCTACTCACAGGGAGAGCCCCATCTCCCTCTAGACAGGGGAGG-----CCCCTTTCTCAGGCCAGAAAAGATCTTGTAGTGAACTACGCAAgaggctgaggcaggagggtcgcttcagcccaggaattcaaggcctgcctgggcaacagagcaagaccctgtctctggggaaaGTATCCTACCGTAGCCTCCCTCGGGG--CCCCCATTCCTCCCTCCTCAGGGCCAGGCAAGGGAGCAGCCCTCTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 4646 399 + 111706 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtaccctatatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGGCCCACTCCCAGGGAGAGCCCGATCTCCCTGCAGGCAGGAGAGG--CCCCCCCTTCCTCAGGCCAGAAAAGATCTTGCAGTAAACTACTCAAgaggctggggcaggaggatcacttgagcccaggaattcaagacctgcctgggcaacaaagcaagatcctgtctctggggaaaaTATCCTACCGTGGCCTCCCTCGGGG--CCCCCGTTCCTCCCACCTCAGGGCCAGTCAAGGGAACAGGCCTCTGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 39820 399 + 192460366 ttagtgtaagtatgtagccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtaccctatatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGGCCCACTCCCAGGGAGAGCCCGATCTCCCTGCAGGCAGGAGAGG--CCCCCCCTTCCTCAGGCCAGAAAAGATCTTGCAGTAaactactccagaggctggggcaggaggatcacttgagcccaggaattcaagacctgcctgggcaacaaagcaagatcctgtctctggggaaaaTATCCTACCGTGGCCTCCCTCGGGG--CCCCCGTTCCTCCCACCTCAGGGCCAGTCAAGGGAACAGGCCTCTGCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 36286 399 - 187378091 ttagtgtaagtatgtaGCCAATATTGCATGAGAAAT----ATGCTAAAAAGTTATTCAGATAAACTTGCATTTATCTGAAATGCaagttcaaatttaactgagtaccctatatttttatttgctaaatctagaAACCCTCTCCAAGAGGCTCCGTGGCCTACTCACA-GGAGAGCCCGATCTCCCTCTAGACAGGAGAGGCAcccccccTTTCTCAGGCCAGAAAAGATCTTGCAGtaaactactcaagaggctggggcaggaggatcacttgagcccaggaattcaagacctgcctgggcaacagagcaagatcctgtctct-gggAAAATATCCTACCGTGGCCTCCCTCGGGG--CCCccgttcctcccacctcagggccaGTCAAGGGAACAGGCCTCTGCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 387428 402 - 91754291 ttagtgtaagtatgtaaccaatattgcatgagaaat----atgctaaaaagttattcagataaacttgcatttatctgaaatgcaagttcaaatttaactgagtaccctatatttttatttgctaaatctagaaaccctCTCCAAGAGGCTCCTTGGCCTACTCACA-GGAGAGCCCGATCTCCCTCTAGACAGGAGAGGCACCCCCCCTTTCTCAGGCCAGAAAAGATCTTGCAGTAaactactcaacaggctggggcaggaggatcacttgagcccaggaattcaagacctgcctgggcaacagagcaagatcctgtcactggggaaaaTATCCTACTGTGGCCTCCCTCGGGGCCCCCCCGTTCCTCCCACCTCCGGGCCAGTCAAGGGAACAGGCCTCTGCTC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I e canFam3.chr33 29048853 238 + 31377067 I e calJac3.chr17 900810 22 - 74750902 I a score=70851.000000 s hg38.chr3_KI270935v1_alt 94433 27 + 197351 TGGGCAG-AAGTGCTG-GCAGCC--GCTCTC s panTro4.chr3_GL389630_random 56455 27 + 103936 TAGGCAG-AAGTGCCG-GCAGCC--GCTCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199751147 27 + 202140232 TAGGCAG-AAGTGCCA-GCAGCC--GCTCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120743665 27 + 123690457 TAGGCAG-AAGTGCCA-GCAGCC--GCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5045 27 + 111706 TAGGCAG-AAGTGCCA-GCAGCC--GCTCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 40219 27 + 192460366 TAGGCAG-AAGTGCCA-GCAGCC--GCTCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 36685 27 - 187378091 TAGGCAG-AAGTGCCA-GCAGCC--GCTCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 387830 26 - 91754291 TAGGCAG-AAGTGCCA--CAGCC--GCTCTC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29049091 31 + 31377067 TGGGCAGCGAGTGCCACCCAGCCCAGCACTC i canFam3.chr33 I 238 C 0 e mm10.chr16 65410920 1607 - 98207768 I e calJac3.chr17 900810 22 - 74750902 I a score=894006.000000 s hg38.chr3_KI270935v1_alt 94460 355 + 197351 --------TGAAAAGCTAGGTG---TTGCCTCAGG-GTCTCCCG-------GTGTCCTGTGGAAAATGCCTGGCCACGGTTTCCATGGTTCCCAGGCTCCAACCCTGCAGTTCTCAGCCCTCATTCAGGAGGGGCCTCGGCAGGGTGGGGGGTGCCGTCTTTCCCTTGCTGGAGCCCCAAGGACTCTGCCGGCTCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTCTGGAGGTTCCCCCGCCTCAATCCACCCAGCTACCCCGAAAGGCACAATCATAGGCCTTTCTCGTCTTTTAAGGGTTTTTACTTCCATGGGGAACTATGTGTTGGATGAGAAAAGTATCCG-GGGAAGGGGACAGAGGTT-----CAGAAA s panTro4.chr3_GL389630_random 56482 356 + 103936 --------TGAAAAGCTAGGTT---TTGCCTCAGCTGGCACCCG-------GTGTCCTGTGGAAAATGCCTGGCCACGGTTTCCATGGTTCCCAGGCTCCAACCCTGCAGTTCTCAGCCCTCATTCAGGAGGGGCCTCGGCAGGGTGGGGGGTGCCCTCTTTCCCTTGCCGGAGCCCCAAGGACTCTGCCGGCTCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTCTGGAGGTTCCCCCCCCTCAATCCACCCAGCTACCCCGAAAGGCAAAATCATAGGCCTTTCTCATCTTTTAAGGGTTTTTACTTCCATGGGGAAGTATGTGTTGGATGAGAAAAGTATCCG-GGGAAGGGGACAGAGGTT-----CAGAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199751174 354 + 202140232 --------TGAAAAGCTAGGTT---TTGCCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACGGTTTCTATGGTTCCCAGGCTCCAACCCTGCAGTCCTCAGCCCTCA-TCAGGAGGGGCCTCGGCAGGGTGGGGAGTGCCCTCTTTCCCTTGCTGGAGCCCCAAGGACTCTGCCAGCTCCCTCGTTTTGGC-----AGCAGCACTGCCCACCCTGTCTCAGGAGGTTCCTTCCCCTCAATCCACTCAGCTACCCTGAAAGGCA-AATCATAGGCCTTTCTCATCTTTCAACGGTTTTTACTTCCATAGGGAAGCATGTGTTGGATGAGAAAAGTATCTG-AGGAAGGGGACACAGGTT-----CAGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120743692 355 + 123690457 --------TGGAAAGCTAGGTT---TTTCCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACAGTTTCTGTGGTTCCCAGGCTCCAACCCTGCAGTCCTCAGCCCTCATTCAGGAGGGGCCTCGGCAGGGTGGCGAGCGCCCTCTTTCCCTTGCCAGAGCCCCAAGGACTCTGCCAGCTCCCTCGCTTCGGC-----AGCAGCACTGCCCACCCTGTCGCTGGAGGTTCCTCCCCCTCAATCCACCCAGCTACCCCGAAAGGCA-AATCATAGGCCTTTCTCGTCTTTTAAGGGTTTTTACTTCCATGGGGAAGCCTGTGTTGGATGAGAAAAGTATCCG-GGGAAGGAGACACAGGTT-----CAGAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5072 340 + 111706 --------TGAAAGGCTAGGTT---TTGCCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACAGTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAG-CCTCATTCAGGAGGGGCCTTGGCAGGGTGGG--GCACCCTGTTTCCCTTGCCGGAGCCCCAAGGACTCTGCCGGCCCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTCTGGAGGTTCCTCC-CTTCGGTCCACCCAGCCACCCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTTCCGTGGGGAGGTATGTGTTGGATGAGAAAAGTGGCCG-GGGAAGGGGACACAGGTT-----CAGAAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 40246 340 + 192460366 --------TGAAAGGCTAGGTT---TTGCCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACAGTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAG-CCTCATTCAGGAGGGGCCTTGGCAGGGTGGG--GCACCCTGTTTCCCTTGCCGGAGCCCCAAGGACTCTGCCGGCCCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTCTGGAGGTTCCTCC-CTTCGGTCCACCCAGCCACCCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTTCCGTCGGGAGGTATGTGTTGGATGAGAAAAGTGGCCG-GGGAAGGGGACACAGGTT-----CAGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 36712 340 - 187378091 --------TGAAAGGCTAGGTT---TTGCCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACAGTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAG-CCTCATTCAGGAGGGGCCTTGGCAGGGTGGG--GCGCCCTGTTTCCCTGGCCGGAGCCCCAAGGACTCTGCCGGCCCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTCTGGAGGTTCCTCC-CTTCGGTCCACCCAGCCACCCCGAA------------AGGCCTTTCTCATCTTTGAAGGGTTTTGACTTCCGTGGGGAGGTATGTGTTGGATGAGAAACGTGGCCA-GGGAAGGGGACACAGGTT-----CAGAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 387856 340 - 91754291 --------TGAAAGGCTAGGTT---TTACCTGAGCTGGCTCCCT-------GTGTCCTGTGGAAAATGCCTGGCCACTGTTTCTGTGGTTCCCGGGCTCCAACCCTGCAGTTCTCAG-CCTCATTCAGGAGGGGCCTTGGCAGGGTGGG--GCGCCCTGTTTCCCTTGCCAGAGCCCCAAGGACTCTGCCGGCCCCCTCGCTTTGGC-----AGCAGCACTGCCCACCCTGTCTTTGGAGGTTCCTCC-CTTCGGTCCACCCTGCTACCCCGAA------------AGGCCTGTCTCATCTTTGAAGGGTTTTGACTTCCGTGGGGAAGTATGTGTTGGATGAGAAAAGTGGCCG-GGGAAGGGGACACAGGTT-----CAGAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 900832 281 - 74750902 --------TGAAAAGTTAGGTT---TTGCCTGAGCTGGCTCCGT-------GTGTCATGTGGGAAATGCCTGGCCA--GTTTCTGTGGCTCTCCTGCTCCCGCCCTGTGGTTCTTGG------------------CCCGGCAGGGCGGAGAGTGCTCTGATTCACTTGCCGGAGCCTCAAAGACTCTGCCTGCTGCT---CTGTGGCTTCTGAGCAGCGCTCCCCACCCTGCCTCTGGCGGCTCCTCC-------------CCGTCACTCTG-------------------------------------------CTTCCATGGGGAAGCGTATGGTGGATGAGAAAAGTGTCCC-GGGAAGGTGACACAGGTT-----CAG-AA i calJac3.chr17 I 22 C 0 s canFam3.chr33 29049122 312 + 31377067 ATACAACCTCCAAGGGTCTGTCAAGTGGACAGGGCTGCGTCCCTCGGCTCCGTTACCCGTGGCACGTGGCTGGGCCCTGTTCCTGCGGCCCTGGGG-----------------TCGG---------GCGAGCAGCGCTGGGAAGCTTGG-------------CCCTT--------CCCCCAGACTC-GCCTGCTCCC---------------A---------CCTGCTCGGTCTGGGTAGCTGCCTCTCCCCTACTCCTCCCAGCTACCTCTAAGTACAAAACCACAGATGTTTCCTGTATTTGAAGGGTTTTTACTTCCGTGGGGAAACACCTGCTGGATGAGGGAAGTTTCGATGGGCAGGTGACAGGGATTTCTTCCAAAA- i canFam3.chr33 C 0 C 0 e mm10.chr16 65410920 1607 - 98207768 I a score=1257304.000000 s hg38.chr3_KI270935v1_alt 94815 397 + 197351 GCTCTGCGAGTCCTGGACGCTG-----GTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACACATCCCCTCTTAAAGACGCAGGCCGATAGCCAGCA-GATCCTGGGGCTTGCTGGCCCCAAGTGAGTTGTCAGGGTTTCAGAGGACACCAGTCATGGCAACCCCAGCTCCATGGCTGCCACACAGGCCTGGGCTTCCCAGGACTGCCTCCTTCTTGTTCGCTTATGTAGATGAAAAATGAGGTAACGGC-ACTCCCCTGCCCCACCCTCCTCCCAGAAGTGCCCAGGGTGTAAACGCAATAGCTTGTGTGA----AGT----CCACTGGAACCCA-GGCTCACCAAGTCAGTCTTAACCAACACAGGCCCCAGCACCCGCAGAGCAGACACTGCGATGACAA s panTro4.chr3_GL389630_random 56838 397 + 103936 GCTCTGCGAGTCCTGGACGCTG-----GTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACACT----GGCCCCACACATCCCCTCTTAAAGACGCAGGCCGATAGCCAGCA-GATCCTGGGGCTTGCTGGCCCCAAGTGAGTTGTCAGGGCTTCAGAGGACGCCAGCCATGGCAACCCCAGCTCCATGGCTGCCACACAGGCCTGGGCTTCCCAGAACTGCCTCCTTCTTGTTCGCTTATGTAGATGAAAAGTGAGGTAACGGC-ACTCCCCCGCCCCGCCCTCCTCCCAGAAGTGCCCAGGGCGTAAACGCAATAGCTTGTGTGA----AGT----CCACTGGAACCCA-GGCTCACCAAGTCAGTCTTAACCAACACAGGCCCCAGCACCCGCAGAGCAGACACTGCGATGACAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199751528 397 + 202140232 GCTCTGCGAGTCCTGGATGCTG-----GTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACACATCCCCTCTTAAAGATGCAAGCCAACAGCCAGCA-GATCCCGGGGCTTGCTGGCCCCAAGTGAGTTGTCAGGGCTTCAGAGGATGCCAGTCACGGCAACCCCAGCTCCGTGGCTGCCACACCGGCCTGGGCTTCCCAGGACTCCCTCCTTCTTATTCACTTATGTAGATGAAAAATGAGGTAATGGC-ACTCCCCCTCCTCACCCTCCTCCCAGAAGTGCCCAGGGTGTAAACACAATAGCTTGTGTGA----AGT----CCACTGGAATCCA-GGCTCACCAAGTCAGTCTTAACCAACACAGGCCTCAGCACCCGCAGAGCAGACACTGCGATAACAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744047 395 + 123690457 GCTCTGCGAGTCCTGGACGCTG-----GTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACACATCCCCTCTTAAAGACGCAGGCCGAGAGCCAGCA-GATCCCAGGGCTTGCTGGCCCCAAGTGAGCTGTCGGGGCTTCAGAGGACGCTAGTCATGGCAACCCCAGCTCCGTGGCTGCCGC-TGGGCCTGGGCTTCCCAGGACTCCCTCCTTCTTGTTCGCTTATGTAGATGAAAAATGAGGTAACGGC-ACTCCCCTGCC-CACCCTCCCCCAAGAAGTGCCCAGGGTGTAAACGCGATAGCTTGTGTGA----AGC----CCACTGGAACCCA-GGCTCAACAAGTCAGTCTTAACCAACACAGGCCCCAGCACCCGCAGAGCAGACACTGCGACGACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5412 397 + 111706 GCTCTGCGAGTCCTGAACGCTG-----CTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGGCGCT----GGCCCCACTCATCCCCTGTTAAAGACGCAGGCCGAGAGCCAGCA-GATCCCGGGGCTTGCTGGCCCCTAGTGAGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCACATGGGCCTGGGCTTCCCAGGACTGCCTCCTTCTTGTTCGCTTATGTAGATGAAAAAGGAGGTAACAGC-ACTTCCCCTCCCCACCCTCCTCCCAGAAGTGCCCAGGGTGTAAACGAAATCGCTTGCGTGA----AGT----CCACTGGAACCCA-GGCTCACCAAGTCAATCTTAACCAACACAGGCCCCAGCAGCCGCAGAGCAGACGCTGCGATGACAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 40586 397 + 192460366 GCTCTGCGAGTCCTGGACGCTG-----CTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACTCATCCCCTGTTAAAGACGCAGGCCGAGAGCCAGCA-GATCCCGGGGCTTGCTGGCCCCTAGTGAGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCACATGGGCCTGGGCTTCCCAGGACTGCCTCTTTCTTGTTCGCTTATGTAGATGAAAAAGGAGGTAACAGC-ACTTCCCCTCCCCACCCTCCTCCCAGAAGTGCCCAGGGTGTAAACGAAATCGCTTGCGTGA----AGT----CCACTGGAACCCA-GGCTCACCAAGTCAATCTTAACCAACACAGGCCCCAGCAGCCGCAGAGCAGACGCTGCGATGACAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37052 397 - 187378091 GCTCTGCGGCTCCTGGACGCTG-----CTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACTCATCCCCTGTTAAAGACGCAGGCCGAGAGCCAGCA-GATCCGGGGGCTTGCTGGCCCCTAGTGAGTTGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCACACGGGCCTGGGCTTCCCAGGACTGCCTCCTTCTTGTTCGCTTATGTAGATGAAAAAGGAGGTAACAgc-acttcccctccccaccctcctcccagaAGTGCCCAGGGTGTAAACGAAATCGCTTGCGTGA----AGT----CCACTGGAACCCA-GGCTCACCAAGTCAATCTTAACCAACACAGGCCCCAGCAGCCGCAGAGCAGACGCCGCGATGACAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 388196 397 - 91754291 GCTCTGCAAGTCCTGGACGCTG-----CTCTGC--------------------------CTTCTTGGCTCACCCTGGAAGGTGGACGCT----GGCCCCACTCATCCCCTGTTAAAGACGCAGGCCGAGAGCCAGCA-GATCCCGTGGCTTGCTGGCCCCTAGTGAGTGGTCAGGGCTTCAGAGGACGCCAGTCATGGCAACCCCAGCTCTGTGGCTGCCACACGGGCCTGGGCTTCCCAGGACTGCCTCCTTCTTGTTCGCTTATGTAGATGAAAAAGGAGGTAACAGC-ACTTCCCCTCCCCACCCTCCTCCCAGAAGTGCCCAGGGTGTAAACGAAATCGCTCGTGTGA----AAT----CCACTGGAACCCA-GGCTCACCAAGTCAATCTTAACCAACACAGGCCCCGGCAGCCACAGAGCAGATGCTGCGATGACAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 901113 299 - 74750902 GCTCCTCGAGTCCTGGCCACTG-----CTCTGT--------------------------CTTCTTGGCTCACCCTGGAAGGCGGACACT----GGCCCCACACATCCCTTCTCAAAGCCGCAGGCCGAGAACCACAG-GATCCCGGGGCTTGCTGGCCCCAAGTGGGTTGTC---------------------------------------------------------------------------------CTTCTTTGCTTATGCAGATGAAAAACGAGGTAACAGC-ACTGCCCGTCCCCACCCTCCTCCCAGAGGTGCGCAGGGTATAAACACAGTCGCTTGCGTGA----AG----------------------TCACCGAGTCAGTCTTAACCACCACAGGCCCTGGCACCAGCAGCCCAGAAAATGCGATGACAG i calJac3.chr17 C 0 I 62 s mm10.chr16 65412527 348 - 98207768 GCTCTGCAGTCCTTGGCTCATGTGGATTCCTGT--------------------------CTTCTTTGCCTGCCTTAGTCGGTATATGCTGTGAGGCT-----------------GAGCTGTAGACCCGGGGTCAGCT-G-----GGATCCTTTGGGGCAGGGGGCAGTTGTCAGGGCTTCAGAGAGCACTAGTTGGGGTAG-CATGTCTTCGGGGCTGCTGTGAAGGCTTTGGCTTCTCTGTGCTGCCTTCATCCTCTAGGTTTATGTAGATGATGA-------------------CCCTCCATGCCATCC----AATAGCACCTAGGGCATAAAC-----------TGTGATGTCAGT----CCACTGGCAC-------TCACCAGGTTGTTCTCATCCCACACAGGTCTCGACATTAGCAGATCAGTTCCTTTGGTGACAA i mm10.chr16 I 1607 C 0 s canFam3.chr33 29049434 418 + 31377067 ATTCTGAGAGTCCTGGTCCCTG-----CTCTGTAGTTCTCGGCTCACTTAGACTCCTGGCTTCTTTGCCCCCCATCAAGGCTGTGTCCT----GGCCCCAAGCCTTCCCTCTGATGGCTTCAGACCAATAATCAACTCAATTCTGAGGCCTGCTTGTCTCAACAGGGTCATC--------AGAGGACATCAGTCAGGG-GATCCCAGTTCCATGGTTGACCCATGGGGCCGGTCTTCT--GATACACCTCCTCCTTCCTTGTATGTGTAGATGAAAAATGAAATAGAAGCAACTTCCCCTCCCCACCCTCCTCCCAG-GGTGCCCAGGGCATAAGCACAAGAGCTTGTGCGA----AGTCGGCCCACTGGGACTCGTGGCTTACAAAGCTGGTCTTACCCAACACAGGCCCCAGCACCAGCAGACCAGGTCCTGTGGTGACAG i canFam3.chr33 C 0 C 0 a score=53202.000000 s hg38.chr3_KI270935v1_alt 95212 17 + 197351 CGGACGACACAGAAGTG s panTro4.chr3_GL389630_random 57235 17 + 103936 CGGACGACACAGAAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199751925 17 + 202140232 CGGAGGACACAGAAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744442 17 + 123690457 CAGACGACACAGAAGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5809 17 + 111706 TGGACGACACAGAAGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 40983 17 + 192460366 TGGACGACACAGAAGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37449 17 - 187378091 TGGACGACACAGAAGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 388593 17 - 91754291 TGGACGACACAGAAGTG i chlSab2.chr15 C 0 C 0 s mm10.chr16 65412875 17 - 98207768 CCAACAACATGGAAGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29049852 17 + 31377067 CAAACCACGTAGAAGAG i canFam3.chr33 C 0 C 0 e calJac3.chr17 901412 62 - 74750902 I a score=359744.000000 s hg38.chr3_KI270935v1_alt 95229 151 + 197351 CCCGCTATGACT-------------CTAGC---------------------------------------------------------ACCGGGCCAC----------------GCCGCTCTGGAAACTCAAACGCTGAGCGCTGAGACCTCTTCTAGGGCCTCAACCCCAGCCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCCCCTGCAAGAGAGACCAGGA s panTro4.chr3_GL389630_random 57252 151 + 103936 CCCGCTATGACT-------------CCAGC---------------------------------------------------------ACCGGGCCAC----------------GCCGCTCTGGAAGCTCAAACGCTGAGCGCTGAGACCTCTTCTAGGGCCTCAACCCCAGTCGGCCCCATTCCAGAAGCAGAGACCAGGGGAGCCAAGAGAATTTCCCCTGCAAGAGAGACCAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199751942 151 + 202140232 CCCGCTATGACT-------------CCAGC---------------------------------------------------------ACCAGGCCAC----------------GCCGCTCTGGAAACTCAAACGCTGAGCGCTGAGACCTCTTCTAGGGCCTCAACCCCAGCCGGCCCCATTCCAGAAGCAGAGACCAGAGAAGCCAAGAGAATTTCCCCTGCAAGAGAGACCAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744459 151 + 123690457 CCCGCTATGACT-------------CCAGC---------------------------------------------------------ACCGGGTCAC----------------GCCTCTCTGGAAACTCAAACGCTGAGTGCCGAGACCTCTTCTAGGGCCGCAACCCCAGCCGGCCCCATTCCAGAAGCAGAGCCCAGGGGAGCCAAGGGGATTTCCCCTGCAAGAGAGACCAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5826 115 + 111706 CCCGCTATGATT-------------CCAGC---------------------------------------------------------ACCAGGCCAC----------------GCCACTCTGGAAACTCGAACTCTGAGTGCCGAGACCTCCTGTAGGTCCTTAACCCCAGCCGGCCCCATTCCAGAAGC------------------------------------AGAGACCAGGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41000 115 + 192460366 CCCGCTATGATT-------------CCAGC---------------------------------------------------------ACCAGGCCAC----------------GCCGCTCTGGAAACTCGAACTCTGAGTACTGAGACCTCCTGTAGGTCCTTAACCCCAGCCGGCCCCATTCCAGAAGC------------------------------------AGAGACCAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37466 112 - 187378091 CCCGCTCTGACT-------------CCAGC---------------------------------------------------------ACCAGGCCAC----------------GCCGCTCTGGAAACTCAAACTCTGAGTGCCGAGACCTCCTGTAGGTC---AACCCCAGCCGGCCCCATTCCAGAAGC------------------------------------AGAGACCAGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 388610 115 - 91754291 CCCACTATGATT-------------CCAGC---------------------------------------------------------ACCAGGCCAC----------------GCCGCTCTGGAAACTCAAACTCTGAGTGCTGAGACCTCCTGTAGGTCCTCAACCCCAGCCGGCCCCATTCCAGAAGC------------------------------------AGAGACCAGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 901474 151 - 74750902 CTCACTGAGACC-------------TCAGC---------------------------------------------------------ACCCAGCCAC----------------GCTGCTTCAGAATCTCAAACGCGGAGCCCCCAGACCTCTTCAAGGACCTCAGACCCAGCCGGCCCCATTCCGGTAGCAGAGACCAGGGGAATCGAGACCATTTCCCCTGCAACAGAGACCAGGA i calJac3.chr17 I 62 C 0 s mm10.chr16 65412892 193 - 98207768 TCCACCTTCACTCAAAGGGACAGGCCCAGC-------------TCAGAGAGAGCT-------------------------------TTCCAGACCACCAACCTGATTCAGTATGTACCTCTAGACACGCAAACTCTCAGCACTGAATCTGCTTCTAATGCTTTAAGTGCAACTAGTATCAGTTCAGAGGTCAATTCCAGAGACACTCAGACCACCTCTTTTGTAACAAAGACCAGGA i mm10.chr16 C 0 I 435 s canFam3.chr33 29049869 208 + 31377067 CCTGCCATGACT-------------CCAGGGGTCAGGACAAATTCAGAAGGAGCCTTCCAGACCGCTGACCTTCTTGAGACCTCTGTGCCAAGCCAC----------------ATGCCTTTGGAAACTCAAACCCTGAGCCCCCAGACGTTTGATTGGACCTTAATCCTGGCCAACAGCAATTCAGAAGCAGAGACCAGGGACACCAAAACCACTTTTCCTGCAATGGAAGGCAGGG i canFam3.chr33 C 0 C 0 a score=885145.000000 s hg38.chr3_KI270935v1_alt 95380 235 + 197351 GTTTCACAAAAA---CATCTCCCAACTTCATGGTGCTGATCGCCACCTCCGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGGAATGACCACAGTTCAGACCATCACAGGCAGTGATCCCAGGGAAGCCATCTTTGACACCCTTTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCACAATGGACATATTGACATTGGCTCACACCTCCACAGAAGCTAAGGGCCT s panTro4.chr3_GL389630_random 57403 235 + 103936 GTTTCACAAAAA---CATCTCCCAACTTCGTGGTGCTGATCACCACCTCTGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGGAATGACCACAGTTCAGACCATCACACGCAGTGATCCCGAGGAAGCCATCTTTGACACCGTTTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCACAATGGACATATTGACATTGGCTCACACCTCCACAGAAGCTAAGGGCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752093 235 + 202140232 CTTTCACAAAAA---CACCTCCCGACTTCAGGGTGCTGATCGCCACCTCTGTGGAGACATCAGCCGCCAGTGGCAGCCCCGAGGGAGCTGGAATGACCACAGTTCAGACTGTCACAGGCAGTGATCCAGAGGAAGCCATCTCTGACACCCTTTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCACAATGGACATATTGACATTGGCTCACACCTCCACAGAAGCTAAGGTGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744610 235 + 123690457 CTTTCACAAAAA---CACCTCCCGACTTCATGGTGCTGATTGCCACCTCTGTGGACACATCAGCCGCCAGTGGAAGCCCCGAGAGAGGCGGAATGACCACAGTTCAGACCGTCACAGGCAGTGATCCCGAGGAAGCCATCTTTGACACCCTTTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCGCAATGGACATATTGACATTGGCTCACACCTCCAAAGAAGCTAAGGGCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 5941 235 + 111706 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCACCACCTCTGTGGAGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGGAATGACCACAGCTGAGACCGTCACAGGCAGTGATCCCAAGGAAGCCGTCTTTGACACCCTTCGCACCGATGATAGCTCTGAAGAGGCAAAGACACGCACAACGGACATATTGACAGTGGCTCACACCTCCACAGAAGCTAAGGGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41115 235 + 192460366 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCCACCTCTGCGGAGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGGAATGACCACAGCTGAGACCGTCACAGGCAGTGATCCCAAGGAAGCCGTCTTTGACACCCTTCGCACCGATGATAGCTCTGAAGAGGCAAAGACACGCACAACGGACATATTGACATTGGCTCACACCTCCACAGAAGCTAAGGGCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37578 235 - 187378091 CTTCCACCGAAA---CACCTCCCGGCCGCACGGTGCTGATCGCCACCTCTGCGGAGACATCCGCCGCCACTGGCCGCCCCGAGGGACCTGGAATGACCACAGCTGAGACCATCACAGGCAGTGATCCCAAGGAAGCCGTCTTTGACACCCTTCGCACCGATGATAGCTCTGAAGAGGCAAAGACACGCACAACGGACATATCGACGTCGGCTCACACCTCCACAGAAGCTAAGGGCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 388725 235 - 91754291 CTTCCACAGAAA---CACCTCCCGACCGCACGGTGCTGATCGCCACCTCTGCGGGGACATCCGCCGCCACTGGCAGCCCCGAGGGACCTGGAATGACCACAGCTGAGACCGTCACAGGCAGTGATCCCAAGGAAGCCGTCTTTGACACCCTTCGCACCGATGATAGCTCTGAAGAGGCAAAGACACGCACAATGGACATATTGACATTGGCTCACACCTCCACAGAAGCTAAGGGCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 901625 238 - 74750902 TCGTCACAAAAATCGTACCTCCCGACTTCGTGGTGGTCATCGCCACCTCCCTGGAGACGTCAGTCACCAGGGGCAGCCCCGAGGGAGCTGGAACGACCACCCTTGAGACCGTCACAGGCCGTGATCCTGAGGACATCGTCTTTGACACCCTGTGCACCGATGACAGCTCTGAAGAGGCAAAGACACTCACTGTTGCCCTGTTGCCGCTGGCTCACGGCTCCGCAGAAGCGGAGGGCCT i calJac3.chr17 C 0 C 0 s mm10.chr16 65413520 232 - 98207768 TTTCAATAAGAA---TACCTTCTGACCTCACGGTTATGCACACCATCCCTACAGAGACATTGGCACCAAGCAACAGCCCC---AGAACTGGGATGAGCACTGTCCAAACTGGCACAGTGTGGGACTCCATAGAAGCCGTCTTTGACACCCTTTGTACCGATGACAGCTCTGAAGAGGCAAGGAAGATCACAGTTGACCTCCTGACGTTGGCACACACCTCCACGGAAGTGGAGTACCT i mm10.chr16 I 435 C 0 s canFam3.chr33 29050077 238 + 31377067 CCTTCACCAAAATGACACCTTCCAAGTTCACGGTGGTGATCACCACTCCTATGGAGGCATCGGCCACCAGTGGCAACCCCGTGGGAACTGGGATGACCACAGTTGAGACTGTTACAGGCAGTGATCTTGCAAAATCTGTCTTCGATGCCCTTTGTACTGATGACAGTTCGGAAGAGGCAAAGAGGATCACAATTGACGTCTTGACATTGGCTCACACTTCTGTGGAAGCTGAAGGCCT i canFam3.chr33 C 0 C 0 a score=705.000000 s hg38.chr3_KI270935v1_alt 95615 2 + 197351 -GT s panTro4.chr3_GL389630_random 57638 2 + 103936 -GT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752328 2 + 202140232 -GT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744845 2 + 123690457 -GT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 901863 2 - 74750902 -GT i calJac3.chr17 C 0 C 0 s mm10.chr16 65413752 2 - 98207768 -GT i mm10.chr16 C 0 C 0 s canFam3.chr33 29050315 2 + 31377067 GG- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e chlSab2.chr15 388960 0 - 91754291 C e macFas5.chr2 41350 0 + 192460366 C e papAnu2.chr2 37813 0 - 187378091 C a score=17741.000000 s hg38.chr3_KI270935v1_alt 95617 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACAGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752330 55 + 202140232 CCTCAGAGAGCAGCGCCTCTTCCGACAGCCCCCATCCAGTCATCACCCCCTCACT i ponAbe2.chr3 C 0 C 0 s mm10.chr16 65413754 55 - 98207768 CTTCAGAGAGCAGCTCTTCCTCTGACAGTTCAGCTGGGGTCCTCAGCAGCTCACG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050317 55 + 31377067 CCTTAAAGAGCAGCGCCTTCTCCGACAGCTCAGTTCTGGCCATCACCGCCCCACG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e macFas5.chr2 41350 0 + 192460366 C e papAnu2.chr2 37813 0 - 187378091 C e nomLeu3.chr11 120744847 0 + 123690457 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=2345.000000 s hg38.chr3_KI270935v1_alt 95672 2 + 197351 GG s ponAbe2.chr3 199752385 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 C 0 C 0 s mm10.chr16 65413809 2 - 98207768 AG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050372 2 + 31377067 GG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e nomLeu3.chr11 120744847 0 + 123690457 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=46343.000000 s hg38.chr3_KI270935v1_alt 95674 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752387 55 + 202140232 CCTCAGAGAGCAGCGCCTCTTCTGACAGCCCCCATCCAGTCATCACCCCGTCATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 95729 2 + 197351 GG s ponAbe2.chr3 199752442 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=46343.000000 s hg38.chr3_KI270935v1_alt 95731 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752444 55 + 202140232 CCTCAGAGAGCAGCGCCTCTTCCGATAGCCCCCATCCAGTCATCACCCCGTCATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 95786 2 + 197351 GG s ponAbe2.chr3 199752499 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=45819.000000 s hg38.chr3_KI270935v1_alt 95788 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752501 55 + 202140232 CCTCAGAGAGCAGTGCCTCTTCCGATAGCCCCCATCCAGTCATCACCCCGTCATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 95843 2 + 197351 GG s ponAbe2.chr3 199752556 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=45702.000000 s hg38.chr3_KI270935v1_alt 95845 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752558 55 + 202140232 CCTCAGAGAGCAGCGCCTCTTCCGATAGCCCCCATCCAGTCATCACCCCCTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 95900 2 + 197351 GG s ponAbe2.chr3 199752613 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=45313.000000 s hg38.chr3_KI270935v1_alt 95902 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752615 55 + 202140232 CCTCAGAGAGCAGCACCTCTTCTGACAGCCCCCATCCAGTCATCACCCTGTCACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 95957 2 + 197351 GG s ponAbe2.chr3 199752670 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=46226.000000 s hg38.chr3_KI270935v1_alt 95959 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752672 55 + 202140232 CCTCAGACAGCAGCGCCTCTTCCGATGGCCCCCATCCAGTCATCACCCCCTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 96014 2 + 197351 GG s ponAbe2.chr3 199752727 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=45739.000000 s hg38.chr3_KI270935v1_alt 96016 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s ponAbe2.chr3 199752729 55 + 202140232 CCTCAGAGAGCAGCACCTCTTCTGACAGCCCCCATCCAGTCATCACCCCATCACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 96071 2 + 197351 GG s ponAbe2.chr3 199752784 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=46096.000000 s hg38.chr3_KI270935v1_alt 96073 57 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACGGG s ponAbe2.chr3 199752786 57 + 202140232 CCTCAGAGAGCAGCACCTCTTCCGATGGCCCCCAACCAGTCATCACCCCATCACGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 57 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATGGT i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 57 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37815 57 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATGGT i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e panTro4.chr3_GL389630_random 57640 0 + 103936 C a score=4410.000000 s hg38.chr3_KI270935v1_alt 96130 6 + 197351 CCTCAG s panTro4.chr3_GL389630_random 57640 6 + 103936 CCTCAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120744904 6 + 123690457 CCCCGG i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41409 6 + 192460366 CCCCGG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37872 6 - 187378091 CCCCGG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e ponAbe2.chr3 199752843 0 + 202140232 C a score=40288.000000 s hg38.chr3_KI270935v1_alt 96136 49 + 197351 AGAGCAGCGCCTCTTCCGACGGCCTCCATCCAGTCATCACCCCGTCACG s panTro4.chr3_GL389630_random 57646 49 + 103936 AGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCTGTCACG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120744853 49 + 123690457 AGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41358 49 + 192460366 ACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 T 57 T 57 s papAnu2.chr2 37821 49 - 187378091 ACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 T 57 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e ponAbe2.chr3 199752843 0 + 202140232 C a score=1144.000000 s hg38.chr3_KI270935v1_alt 96185 2 + 197351 GG s panTro4.chr3_GL389630_random 57695 2 + 103936 GG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C e ponAbe2.chr3 199752843 0 + 202140232 C a score=67848.000000 s hg38.chr3_KI270935v1_alt 96187 55 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCGTCACG s panTro4.chr3_GL389630_random 57697 55 + 103936 CCTCAGAAAGCGGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCTGTCACG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752843 55 + 202140232 CCTCAGAGAGCAGCACCTCTTCCGATGGCCCCCAACCAGTCATCACCCCATCACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 55 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATG i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 41352 55 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 37815 55 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATG i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 6176 0 + 111706 C e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C e chlSab2.chr15 388960 0 - 91754291 C a score=4102.000000 s hg38.chr3_KI270935v1_alt 96242 2 + 197351 GG s panTro4.chr3_GL389630_random 57752 2 + 103936 GG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752898 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744902 2 + 123690457 GT i nomLeu3.chr11 C 0 T 57 s rheMac3.chrUn_JH291127 6176 2 + 111706 GG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41350 2 + 192460366 GG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 37813 2 - 187378091 GG i papAnu2.chr2 T 57 C 0 s chlSab2.chr15 388960 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C e calJac3.chr17 901865 0 - 74750902 C a score=171187.000000 s hg38.chr3_KI270935v1_alt 96244 57 + 197351 CCTCAGAGAGCAGCGCCTCTTCCGACGGCCCCCATCCAGTCATCACCCCCTCATGGT s panTro4.chr3_GL389630_random 57754 57 + 103936 CCTCAGAAAGCGGCGCCTCTTCTGACGGCCCCCATCCAGTCATCACCCCCTCATGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752900 57 + 202140232 CCTCAGACAGCAGCGCCTCTTCTGATAGCCCCCATCCAGTCATCACCCCCTCATGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744847 57 + 123690457 CCTCAGAGAGCGGCGCCTCTTCCGACGGCCCCCATCCGGTCATCACCCCCTCATGGT i nomLeu3.chr11 T 57 C 0 s rheMac3.chrUn_JH291127 6178 57 + 111706 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41352 57 + 192460366 CCTCAGACAGCAGCGCCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37815 57 - 187378091 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCGTCACCCCCTCATGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 388962 57 - 91754291 CCTCAGACAGCAGCACCTCTTCCGACGGCCCCCATCCAGCCATCACCCCCTCATGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 901865 57 - 74750902 CCTCAGGGAGCAGCGCTTCTTCCCACGGCTCCCGGCCAGCCATCACCACCTCATGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65413811 0 - 98207768 C e canFam3.chr33 29050374 0 + 31377067 C a score=1065650.000000 s hg38.chr3_KI270935v1_alt 96301 290 + 197351 CCCCGGGATCTGACGTCACTCTCCTCGCTGAAGCCCTGGTGAC------TGTCACAAACATCGAGGTTATTAATTGCAGCATCACAGAAATAGAAACAACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCTCATCCCCACGGAAGGGGTGAAGGCCTCGTCCACCTCCGATCCACCAGCTCTGCCTGACTCCACTGAAGCAAAACCACACATCACTGAGGTCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCTGCACCTGATGCCACGGTTGGG s panTro4.chr3_GL389630_random 57811 290 + 103936 CCCCGGGATCTGATGTCACTCTCCTCGCTGAAGCCCTGGTGAC------TGTCACCCACATTGAGGTTATCAATTGCAGCATCACAGAAATAGAAACAATGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCTCATCCCCACGGAAGGGGTGAAGGCCTCGTCCACCTCCGATCCACCAGCTCTGCCTGACTCCACTGATGCAAAACCACACATCACTGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCTGGCACCACAGAGTCAGCCGCACCTGATGCCACGGTTGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199752957 290 + 202140232 CCCCGGGATCTGACGTCACTCTCCTCACTGAAGCCCTGGTGAC------CGTCACCCACATCGAGGTTATCAATTGCAGCATCACAGAAATAGAAACACTGACTTCCAGCATCCCTGGGGCCTCAGACAGAGATCACGTCCCCACGGAAGGGGTGAAGGCCTCGTTCACCTCTGATCCACCAGCTCTGCCTGACTCCACTGACGCAAAACCACACATCACTGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAGCCGCACCTGGTGCCACAGTTGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120744904 290 + 123690457 CCCCGGGATCTGACGTCACTCTGCTCGCTGAAGCCCTGGTGAC------CGTCACCCACATCGAGGTTATCAATTGCAGCATCACAGAAATAGAAACAACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCACATCCCCACGGAAGGGGTGAAGGCCTCGCCCACCTCCCATCCACCAGCTCTGCCTGACTCCACTGACGCAAAACCACACGTCACGGAGGCCACAGCCTCTCCCGAGACCCTGTCCACAGCCGGCACCGCAGAGTCAGCTGCACCTGATGCCACGGTTGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6235 290 + 111706 CCCCGGGATCTGACGTCGCTCTCCTCACTGAAGCCCTGGTGAC------CGTCACCCACATCGAGGTTATCAATTGCAGCATCACAGAAACAGAAACAACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCACATCCCCACGGAAGGGATGAAGGCCTCGCCCACCTCCAATCCACCAGCTCTGCCTGACTCCACTGATGCAAAACCACACAGCACCGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41409 290 + 192460366 CCCCGGGATCTGACGTCGCTCTCCTCACTGAAGCCCTGGTGAC------CGTCACCCACATTGAGGTTATCAATTGCAGCATCACAGAAACAGAAACAACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCACATCCCCACGGAAGGGATGAAGGCCTCGCCCACCTCCAATCCACCAGCTCTGCCTGACTCCACTGATGCAAAACCACACAGCACTGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTTAACCGCACCTGATGCCACGGTTGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 37872 290 - 187378091 CCCCGGGATCTGACGTCGCTCTCCTCGCTGGAGCCCTGGTGAC------CGTCACCCACATCGAGGTTATCCATTGCAGcgtcacagaaacagaaacaaggaCTTCCAGCATCCCTGGGGCCTCAGACGCAGATCACATCCCCACGGAAGGGATGAAGGCCTCGCCCACCTCCAATCCACCAGCTCTGCCTGACTCCACTGATGCAAAACCACACAGCCCCGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389019 290 - 91754291 CCCCGGGATCTGACGTCACTCTCCTCACTGAAGCCATGGTGAC------CGTCACCCACATCGAGGTTATCAATTGCAGCATCACAGAAACAGAAACGACGACTTCCAGCATCCCTGGGGCCTCAGACACAGATCACATCCCCACGGAAGGGATGAAGGCCTCGCCCACCTCCAATCCACCAGCTCTGCCTGACTCCACTGAGGCAAAACCACACAGCACCGAGGCCACAGCCTCTGCCGAGACCCTGTCCACAGCCGGCACCACAGAGTCAACCGCACCTGATGCCACGGTTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 901922 290 - 74750902 CCCCCGCATCTGACGTCACTGTCCTCACCGAAGCGCTGGTGGC------TGTCACCCACATGGAGGTTATCAACTGCAGCATCCCAGAAATAGAAACAGCCACTTCCATCATCGCTGGGGCCCGAGACACAGACCACATCTCCACAGCAGCAGTGAAGGACTCGCCCACCTTGCATCCACCAGCTCTGCCCGACTCCACTGCCACAGAACCACACGTCACGGAGGCCACGGCCTCCGCTGAGACCCCGTCAACAGCCAGCGCCACAGAGTCAGCCACACCTGATGCCACAGTTAAG i calJac3.chr17 C 0 I 2871 s mm10.chr16 65413811 281 - 98207768 TCCTGGGACCCGACAGTGCAACTCCAGCCAAGGGGTTGGTTGCCTTCAACATCACTCATATTAAACTCAGCAACTGCA---TCACAGAAATAGAAACAACCA---TCACCATCTCTGGGGCCCCAGGCGCGAGCCTCAGCCCTACAGAAGCGACGGCAGCTTTGTTCACTTCTGAGATATTAACTTTGCCTCCACCCACTGAGGCAAAACCAATTTTCCCCGAGACCACAAGCTTATCTGGGATCCTGTCAACTGCTGGCACCCCGG---------CCCTTGCCACCACCCTTGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050374 290 + 31377067 CCCTCGCACCTGACAAGAGCACTCCGGCTAAGGGTTTGTTTGCCTACAGCATCACTGACATTGAGGTTGCCAACTGCAGCATTCTAGAAATAGAAACA---ACTGCCACCACCCTTGGGACCTTGGACATGGATCTCAACCCCAC---AGGGGGAGAGGTCCTATCTCCCCCTGTGGTGTCAGCTTTGCTCAATTCCACTGAAGCAGAATCACACATCACCGAGACCACACCATCCGCGGAGACCTTGTCAGCAGCCAGTGCCACAGAGGCAGCCACACCTGATACCACAGTTGAG i canFam3.chr33 C 0 C 0 a score=753633.000000 s hg38.chr3_KI270935v1_alt 96591 253 + 197351 ACCCCACTCCCCACTAACAGCGCCACAGAAAGAGAAGTGACAGCACCCGGGGCCACGACCCTCAGTGGAGCTCTGGTCACAGTTAGCAGGAATCCCCTTGAAGAAACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACAACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGC------CCCTCGGAAGCCGCCCTCA--- s panTro4.chr3_GL389630_random 58101 247 + 103936 ACCCCACTCCCCACCAACAGCACCATAGAAAGAGAAGTGACAGCACCCAGGGCCATGACCCTCAGTGGAGCTCTGGCCACAG------GGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTGAAAGTCTCAGGAGCAGCTCCGGTCTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACAACTTCCTTTGCTGGGAGCTCCGCTTCCTCCTACAGC------CCCTCGGAAGCCGCCCTCA--- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199753247 253 + 202140232 ACCCCACTCCCCACCAACAGCACCACAGGAAGCAAAGTGACAGCACCCAGGGCCACGACCCTCAGTGGAGCTCTGGCCACAGTTAGTGGGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTGGTCTCCATAGAGGCTGGGTCAGCAGTGGGCAAAACTACTTCCTTTGCTGGGAGCTCTGCTTCCTCCTACAGC------CCCTCGGAAGCCACCCTCA--- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745194 253 + 123690457 ACCCCACTCCCCACCAACAGTGCCACGGAAAGAGAAGTGACAGCACCCAGGGCCACAACCCTCAGTGGAGCTCTGGCCACAGTTAGCGGGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGTTGAGACACCAAGTTACGTCAGAGTCTCAGGAGCAGCCCCGGTCTCCATAGAAGCTGGGTCAGCAGTGGACAAAAGCACTTCCTTTGCTGGGAGCTCTGCTTCCTTCTACAGC------CCCTCGGAAGCCGCCCTCG--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6525 253 + 111706 ACCCCACTCCCCACCAACAGCGCCACAGAAAGAGAAGTGACAGCACCCAGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTTAGCGGGAGTCCCCTGGAAGAAACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC------CCCTCAAAAGCCACCATCA--- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41699 253 + 192460366 ACCCCACTCCCCACCAACAGCGCCACAGAAAGAGAAGTGACAGCACCCAGGGCCACGACCCTCAGTGGAACTCTGGCCACAGTTAGCGGGAGTCCCCTGGAAGAAACCTCAGCCCTCTCTGTGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCTCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC------CCCTCAAAAGCCACCATCA--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38162 253 - 187378091 ACCCCACTCCCCACCAACAGCGCCACAGAAAGAGAAGTGACAGCACCCAGGGCCACGACCCTCAGTGGAACTCTGGCCACAGGTAGCGGGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGCGGAGACACCAAGTTACGTCAAAGTCTCAGGAGCAGCTCTCGTCCCCACAGAGGCCGGGTCAACAGTGGGCAAAACAGCTTCCTTTGCTGGGGGCTGTGCTTCCTCCTACAGC------CCCTCAGAAGCCATTATCA--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389309 253 - 91754291 ACCCCACTCCCCACCAACAGCGCCACAGAAAGAGAAGTGACAGCACCCAGGGCCACGACCCTCAGTGGAACTCTGTCCACAGGTAGCGGGAATCCCCTGGAAGAAACCTCAGCCCTCTCTGTTGAGACACCAAGTTGCGTCAAAGTCTCAGGAGCAGCTCTCGTCCCCACAGAGGCCGGGTCAGCAGTGTGCAAAACAGCTTCCTTTGCTGGGGGCTCTGCTTCCTCCTGCAGC------CCCTCAAAAACCACCATCA--- i chlSab2.chr15 C 0 C 0 s mm10.chr16 65414092 256 - 98207768 GGGACAGTCTCCACTAGTGCAATCACAGAAAGCGAAACAGCAGTGGCCCAGACTCTTACCTCTGTTGGAACTTCGGTGACAGTTAGAAGGAACCCCCTGGAAAACACTTCAACACTCTCTATTGAGACACAAAGCCACACTGAGGTCTTGGGCACCATCACAGTCCCCATGGTTGCTGGATCAACAATGGGAGAAGCAGCCTCCTTCGT---GAGTTTCACGGCTCTCGACAGCAGCAGTCTCTCAGTGGTGGTCACCA--- i mm10.chr16 C 0 I 3 s canFam3.chr33 29050664 256 + 31377067 ACCCCACTAACTGCCAATAGCCCTACAGAAGGAGAAGCAACAGCAGCTACGACCACCACCCCCAGCACAACTTTGGTCTCAGTCAGCGTGAACCCCTTGGAAGAAGCTTCAGTCCTCTCTATTGAGACGACAAGCCACACCAAGGTCTTGGGAGCAGTGACAGTCTCCACAGAGGCTGGGTTAACAGTGGGGAAAGCGACTTCACCTGCTGGGCTCTCAACTATGGCCCACAGC------TACAGCCACATCGCCACTAGCA i canFam3.chr33 C 0 C 0 e calJac3.chr17 902212 2871 - 74750902 I a score=86200.000000 s hg38.chr3_KI270935v1_alt 96844 21 + 197351 AGAACTTCACCCCTTCAGAGA s panTro4.chr3_GL389630_random 58348 21 + 103936 AGAACTTCACCCCTTCAAAGA i panTro4.chr3_GL389630_random C 0 I 25 s ponAbe2.chr3 199753500 21 + 202140232 AGATCTTCACCCCTTCAGAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745447 21 + 123690457 AGAACTTCACCCCTTCAGAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6778 21 + 111706 AGAACTTCACCCCTTCAGAGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41952 21 + 192460366 AGAACTTCACCCCTTCAGAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38415 21 - 187378091 AGAACTTCACCCCTTCAGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389562 21 - 91754291 AGAACTTCACCCCTTCAGAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905083 21 - 74750902 AGAACTTCACCCCGTCAGAGA i calJac3.chr17 I 2871 C 0 s mm10.chr16 65414351 21 - 98207768 AGAGCTCTGCTACCTCAGAGA i mm10.chr16 I 3 C 0 s canFam3.chr33 29050920 21 + 31377067 AGAGCACCACCCCCTCACAGC i canFam3.chr33 C 0 C 0 a score=55636.000000 s hg38.chr3_KI270935v1_alt 96865 23 + 197351 CACCGACCATGGACATCGCAACC s ponAbe2.chr3 199753521 23 + 202140232 CACCGACCACGGACATCACAACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745468 23 + 123690457 CACCCACCACGGGCATCACGACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6799 23 + 111706 CACCGACTGCCGACGTCACAACC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41973 23 + 192460366 CACCGACTGCCGACGTCACAACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38436 23 - 187378091 CACCGACTGCAGACGTCACAACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389583 23 - 91754291 CACCGACTGCAGACGTCACAACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905104 20 - 74750902 ---CCACCATGGACTTCACAGCC i calJac3.chr17 C 0 I 1 s mm10.chr16 65414372 23 - 98207768 CTTTAACCACAGGCAATACAACC i mm10.chr16 C 0 C 0 s canFam3.chr33 29050941 23 + 31377067 CTTCTACCGCGGATGGCACAACC i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58369 25 + 103936 I a score=203792.000000 s hg38.chr3_KI270935v1_alt 96888 59 + 197351 AAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAACCAA s panTro4.chr3_GL389630_random 58394 62 + 103936 AAGGGGCCCTTCCCCAACAGCAGGGGACCCTCTTCCTTTCTGTC--------------------------------------CCCTCCGAATACAACCAA i panTro4.chr3_GL389630_random I 25 I 2322 s ponAbe2.chr3 199753544 59 + 202140232 CAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAACCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745491 98 + 123690457 AAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGTCCCTCCGACTACAACCAGCAGGGACCCTCTTCCTTCTGTCCCTCCGACTACAACCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6822 59 + 111706 AAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAGCCAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 41996 59 + 192460366 AAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAGCCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38459 59 - 187378091 AAGGGGCCCTTCCCCACCAGCA-GGGACCGTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAGCCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389606 59 - 91754291 AAGGGGCCCTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTGT---------------------------------------CCCTCCGACTACAGCCAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905125 59 - 74750902 AGGGCGCCTTTCCCCACCAGCA-GGGACCCTCTTCC-TTCTAT---------------------------------------CCATCCGACTACAGCCAG i calJac3.chr17 I 1 C 0 s mm10.chr16 65414395 59 - 98207768 AACAGCTCCTTCCTCACAGAGA-GCCACCCTCCTTT-TTCTAT---------------------------------------CTATTCAACTACAGCTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29050964 59 + 31377067 AATGAGTCTGTCCCCATCACCA-GGAGCCCCGCTCC-TTCTGT---------------------------------------CCAGCTGACCAGGGCCAA i canFam3.chr33 C 0 C 0 a score=384020.000000 s hg38.chr3_KI270935v1_alt 96947 134 + 197351 CAGCAGCCGAGGGACGAACAGCACCTTAGCCAAGATCACAACCTCAGCGAAGACCACGA---------------------TGAAGCCCCCAACAGCCACGCCCACGACTGCCCGGACGAGGCCGACCACAGACGTGAGTGCAGGTAAGT--GGCTCC s ponAbe2.chr3 199753603 134 + 202140232 CAGCAGCCGAGGGATGAACAGCACCTTAGCCAAGACCACAACCTCAGCAAAGACCCCCA---------------------TGAAACCCCCAACAGCCACGCCCACCACTGCTCGGACGAGGCTGACCACAGACGTGAGTGCAGGTAAGT--GGCTCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745589 134 + 123690457 CAGCAGCCAAGGGACGAACAGCTCCTTAGCCAAGACCACGACCTCAGCGAAAACCCTGA---------------------TGAAGCCCCCAACAGCCATGCCCACCACTGCTCGGACGAGGCCGACCGCAGACAGGAGTGCAGGTAAGT--GGTTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 6881 134 + 111706 CAGCAGCCGAGGGATGAACAGCACCTTAGCCAAGACCACAGCCTCAGCGAAGACCCCGA---------------------TGAAGCCCCCAACAGCCACGCCCACCACTGCTCGGACGAGGCCGACCACAGACGTGAGTGCAGGTAAGT--GGCTCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42055 134 + 192460366 CAGCAGCCGAGGGATGAACAGCACCTTAGCCAAGACCACAGCCTCAGCGAAGACCCCGA---------------------TGAAGCCCCCAACAGCCACGCCCACCACTGCTCGGACGAGGCCGACCACAGGCGTGAGTGCAGGTAAGT--GGCTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38518 134 - 187378091 CAGCAGCCGAGGGACGAACAGCACCTTAGCCAAGACCACAGCCTCAGCGAAGACCCCGA---------------------TGAAGCCCCCAACAGCCACGCCCACCACTGCTTGGAGGAGGCCGACCACAGACGTGAGTGCGGGTAAGT--GGCTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389665 134 - 91754291 CAGCAGCCGAGGGACGAACAGCACCTTAGCCAAGACCACAGCCTCAGCGAAGACCCCAA---------------------TGAAGCCCCCAACAGCCACGCCCACCGCTGCTCGGACGAGGCCGACCACAGACGTGAGTGCAGGTAAGT--GGCTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905184 116 - 74750902 CAGCAGCCCAGGAACCAGCAGCACCTCAGCCAAG------------------ACCCCGA---------------------TGGAGCCCCTGACAGCCATGTCCCCCACTGCCCGGACGGGGCAGACCACAAACGTCAGCGCAGGTAGGT--GGCCCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65414454 133 - 98207768 CACCAGCAAAAACCCAAACATCACCTTAACCAAGACCACAGCCTCACCAAAGCCCCCGA---------------------CGCATCCTACAACATCTGCATCC---ACTGCTTGGATAAGGAAAACCACAAAACATGATCCAGGTAAGCAAAACTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29051023 155 + 31377067 CAGCAGCCAAGAGGCAAACATCACCTTATTTAGGACCACAGCCTTAGCAAAGACCTTGAAGACAGCCAGCGTGGCTGGAGGGAAGACCCCAACAGCTATGCCCACTGTGGTTCAGACAAGGTGGACCACAGAAGCCACTGCGGGTAAGT--GGCTCC i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=253883.000000 s hg38.chr3_KI270935v1_alt 97081 120 + 197351 --TGCTGGTGATCTTCGGGGATTTGGGATGCGGAGTTTCCAGGACGTCTCCGCACTTGAGGAGTGGAGAGGAGGGAAGGATCTGGA-GCCTACTCAGAG-CCTGCTCCTGATGTTGCCTCTTCG- s ponAbe2.chr3 199753737 120 + 202140232 --CTCTGGTGATCTTCGGGGATTTGGGATGCGGAGTTTCCAGGAGGTCTCCTCACTTGAGGAGTGGAGAGGAAGGAAGGATCTGGA-GCCTATTCAGAG-CCTGCTCCTGATGTTACCTCTTTG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745723 120 + 123690457 --TGCCGGTGATCTTCGGGGATTTGGGATGCGGAGTTTCCAGGACGTCTCCGCACTTGAGGAGTGGAGAGGAAGGAAGGATCTGGA-GCCTATTCAGAG-CCTGCTCCTGATGTCGCCTCTTCG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7015 119 + 111706 --TGCTGGTGATCTTT-GGGATTTGGGATGCGGAGTTTCCAGGACGTCTCCGCGCTTGAGGAGTGGAGGGGAAGGAAGGATCTGGA-GCCTATTCAGAG-CCTGCCCCTGATGTTGCCGCTTCG- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42189 119 + 192460366 --TGCTGGTGATCTTT-GGGATTTGGGATGCGGAGTTTCCAGGACGTCTCCGCGCTTGAGGAGTGGAGGGGAAGGAAGGATCTGGA-GCCTATTCAGAG-CCTGCCCCTGATGTTGCCGCTTCG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38652 120 - 187378091 --TGCTGGTGATCTTTGGGGATTTGGGATGCGGAGTTTCCAGGGCGTCTCCGCGCTTGAGgagtggagaggaaggaaggatctGGA-GCCTATTTGGAG-CCTGCCCCTGATGTTGCCGCTTCG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389799 120 - 91754291 --TGCTGGTGATCTTTGGGGATTTGGGATGCGGAGTTTCCAGGACGTCTCCGCGCTTGAGGAGTGGAGAGGAAGGAAGGATCTGGA-GCCTATTTGGAG-CCTGCCCCTGATGTTGCCGCTTCG- i chlSab2.chr15 C 0 C 0 s mm10.chr16 65414587 94 - 98207768 --CATGAGAGATTTTTGGAGATTTGGAGT----AGC------------------CTTAAGGAGTTGAGTTGAAAGAAGGAGCTAAAGGCCAATATTGCA-CCCTCTCC-----TTGGCATTTCA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29051178 123 + 31377067 CTCGGGTGTGAGCTTG-GGGATTCAGGGTTTGGACTTGCCAGGATGTCTACGTGCTCAGGGGGTGGGGAGGGAGGAAGGATCTGGG-GCCTATTCTGAGCCCCGTCTCTGATGCCCCCCTTTTCA i canFam3.chr33 C 0 C 0 e calJac3.chr17 905300 0 - 74750902 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=229327.000000 s hg38.chr3_KI270935v1_alt 97201 91 + 197351 TGATCTTCTAGTGGTTCTTGGCGAAATCAGGAAAAGGc-------agatggagggttgtgtatggaaag------------------------------------------------------g-ggtggggatggaagtccggagaaatggt s ponAbe2.chr3 199753857 91 + 202140232 TAATCTTCTAGTGGTTCTTGGCGAAATCAGGAAAAggc-------agatggagggttgtgtatggaaag------------------------------------------------------a-tgtggggatggaagtctggagaaatggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745843 89 + 123690457 TGATCTTCTAGTGGTTCTTGACGAAATCAGGAAAAGGC-------AGATGGAGggttgtgtatggaaag---------------------------------------------------------gtggagatggaagtccggagaaatggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7134 91 + 111706 TGATCTTCTAGTGGTTCTTGGCGAAATCAGGAAAAGGC-------AGATGGAGggttgtgtatggaaag------------------------------------------------------a-ggtggagatggaagtctggagaaatggt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42308 91 + 192460366 TGATCTTCTAGTGGTTCTTGGCGAAATCAGGAAAAggc-------agatggagggttgtgtatggaaag------------------------------------------------------a-ggtggagatggaagtctggagaaacggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38772 91 - 187378091 TGATCTTCTAGTGGTTCTTGGCGAAATCAGGAAAAGGC-------AGATGGAGGGTTGTGTATGGAAAG------------------------------------------------------A-GGTGGAGATGGAAGTCTGGAGAAATGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 389919 91 - 91754291 TGATCTTCTAGTGGTTCTTGGTGAAATCGGGAAAAGGc-------agatggagggttgtgtatggaaag------------------------------------------------------a-ggtggagatggaagtctggaaaaatggt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905300 89 - 74750902 TGGTCTTCCAGTGGTTCTTGGCTAAATCAGGAAAAggc-------agatgga-ggcagcgtgtggagag--------------------------------------------------------cgtggagatggaagtctggagacatggt i calJac3.chr17 C 0 C 0 s mm10.chr16 65414681 150 - 98207768 TGACCTCCTGGTGGGTC--GGTAAAAAGCAGCTAAGATGTATATGAGATGTAgtgatgtgtaggtgacgttgtgatgtatgtgtgatgtcatgatatatatgtgatatcatgatgtgtgtgtga-tgtagtgatgtatgtgtgatgtaatgat i mm10.chr16 C 0 I 113 s canFam3.chr33 29051301 91 + 31377067 TGATCTTCTAGTGATGCTTCCCAAAATCAGAAACAAGG-------ACAGTTAGGGAGGTGTATGGAAAC------------------------------------------------------ACTGTGGGGTTGGAAGTCTGGAGAAATGT- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=106392.000000 s hg38.chr3_KI270935v1_alt 97292 40 + 197351 ttgcggtctcgg-ctctgcctgtaacaacccgagtgacctt s ponAbe2.chr3 199753948 40 + 202140232 ttgtggtctcgg-ctctgcctctaacaacctgagtgacctt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745932 40 + 123690457 ttgcggtctcgg-ctctgcctctaacaacccaagtgacctt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7225 40 + 111706 tttcagtctcag-ctctgcctctaacaacccgagtgacctt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42399 40 + 192460366 tttcagtctcag-ctctgcctctaacaacccgagtgacctt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38863 40 - 187378091 TTTCGGTCTCAG-CTCTGCCTCTAACAACccgagtgacctt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390010 40 - 91754291 tttcagtctcag-ctctgcctctaacaacccgagtgacctt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905389 40 - 74750902 ttgccatctcag-ctctgcccttaacagcccgagcggccct i calJac3.chr17 C 0 C 0 s mm10.chr16 65414944 36 - 98207768 TTGAGATCTTGG-CTGTGCTTT----AACCTGAGAGACCTT i mm10.chr16 I 113 C 0 s canFam3.chr33 29051392 41 + 31377067 TTGAGATCCTGGTTTTTGCCCTTAAGTTGTTAAGTGACCTT i canFam3.chr33 C 0 I 100 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=576024.000000 s hg38.chr3_KI270935v1_alt 97332 241 + 197351 gggcaagtccctgtccc----tctctgg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtatttggagagggttggaatgggcactgaagtcctgtccagctctgaccttctgtgaAGTGCACTGTTGAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCATAGCCACACAGAGGAGCAGCAGGCAGGCATCAGGCCCAAGCTGCTGCTCTCTG---ACAGGCTGGGACCCCATGAAAGTGGGGCCTGCTGGATGCATTTCCTG s ponAbe2.chr3 199753988 241 + 202140232 gggcaagtccccatccg----tctctgg---------------------------------------------------------------------------------gcc------------tcagttttcccac-ccatagttggagaaggttgggatgggcactgaagtcctgtccaactctgaccttctgtgaAGTGCACTGTTGAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCATAGCCACACAGAGGGGCAGCAGGCGGGCATCAGGCCCAAGCTGCTGCTCTCTG---ACGGGCTGGGACCCCATGAAATTGGGGCCTGCTGGATGCATTTCCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120745972 241 + 123690457 gggcaagtccctgtccc----tctctgg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ccatagttggagagggttggaatgggcactgaagtcctgtccagctctgaccttccatgaAGTGCACTGTTGAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCATAGCCACACAGAGGAGCAGCAGGCAGGCATCAGGCCCAAGCTGCTGCTCTCTG---ATGGGCTCGGACCCCATGAAAGTGGGGCCTGCTGGATGCATTTCCTG i nomLeu3.chr11 C 0 I 87807 s rheMac3.chrUn_JH291127 7265 241 + 111706 gggcaagtccctctccc----tctccgg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTAAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCGTAGCCACACAGAGGAGCAGCATGCAGGCATCAGGCCCAAGCTGCTGTTCTCTG---ACAGGCTGGGACCCCATGAAAGTGGGACACGCTGGATGCATTTCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42439 241 + 192460366 gggcaagtccctctccc----tctccgg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTAAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCGTAGCCGCACAGAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTCTG---ACAGGCTGGGACCCCATGAAAGTGGGACACGCTGGATGCATTCCCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 38903 241 - 187378091 gggcaagtccctctccc----tctctgg---------------------------------------------------------------------------------gcc------------tcagtttccccac-ctgcagTTGGAGAGGGTTGGGATGGGCACCGAAGTCCTGTCCAGCTCTGACCTTCTATGAAGTTCACTGTTGAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCATAGCCACACAGAGGAGCAGCGTGCAGGCATCAGGCCCAAGCTGCTGTTCTCTG---ACGGGCTGGGACCCCGTGAAAGTGGGGCACGCTGGATGCGTTTCCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390050 322 - 91754291 gggcaagtccctctccc----tctccgggcctcagtttccccacctgtaGTTTTTGgctctgtctctaacaacacaagtgaccttgggcaagtccctctccctctccgagcc------------tcagtttccccac-ctgtagttggagagggttgggatgggcaccgaagtcctgtccagctctgaccttctatgaAGTTCACTGTTGAGCAGCT------------------------------------------------------CTGGAAGCTTCTATTCCAGCCATAGCCGCACAGAGGAGCAGCATGCAGGCATCAGGCCCAAGCTGCTGCCCTCTG---ACGGGCTGGGACCCCATGAAAGTGGGGCCTGCTGGATGCATTTCCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905429 241 - 74750902 gaccaagtccctctccc----tctctgg---------------------------------------------------------------------------------gcc------------tcagtttctccac-ctgtagttggagaggcttgggatgggcactgaagtcctttccagctctgaacttctgtgaAGTTCACTGTTGAGCAGCT------------------------------------------------------CTGGAAACTTCTATTCCAGCCGTTGCGCCACAGAGGAGCAGCACGCAGGCATCAGGCCCAAGCTGCTACTCTCTG---ACAGGCTGGGACCCCATGAAAGTGGGGCCCTCTGGATGCATTTCCTA i calJac3.chr17 C 0 C 0 s mm10.chr16 65414980 293 - 98207768 GGACCTGCCCCTCTCCTCTGATCTCCTG---------------------------------------------------------------------------------GCTGGTAAAAAGCAGCTAGTTTCTTCGCTTTGTGGT------------GGATGAGCGCC---ATCTTTTCCAGGTCTAA-CTTCTGTGAAGTTAACTATTGGGCGGCTACTGTGCTTCAGATGAGATCTGTAATGCTATTCAAAAGACTTGACCCTCACGCCTTGGAAGCCTCTA-GCCAGCAATGCCCACACAGAAGGAAAGAATGTGCAAAT-GCGTCCAAATCGCTGCCCTGCAAGCATGTGCAGGG----CACGCAAGTGGGGCTTGGTGGCCATATTTACTG i mm10.chr16 C 0 C 0 e canFam3.chr33 29051433 100 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=73739.000000 s hg38.chr3_KI270935v1_alt 97573 39 + 197351 GGATTTATGCCATAGATAGTGACTTAAAATAAATTAA------TA s ponAbe2.chr3 199754229 39 + 202140232 GGATTTATGCCATAGATAGTGACTTAAAATAAATTAA------TA i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 7506 45 + 111706 GGATTTATGCCATAGATAGTGACCTAAAATAAATGAATACAGGTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42680 45 + 192460366 GGATTTATGCCATAGATAGTGACCTAAAATAAATGAATACAGGTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39144 45 - 187378091 GGATTTATGCCATAGATAGTGacctaaaataaatgaatacaggta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390372 39 - 91754291 GGATTTATGCCATAGATAGTAACTTAAAATAAATGAA------TA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905670 39 - 74750902 GGATTTATGCCATAGATAGTGACTTAAAATAAATACA------TA i calJac3.chr17 C 0 C 0 s mm10.chr16 65415273 39 - 98207768 TGTTTTACACCATAAAGAGTGATTTTAGACAAACCAA------CA i mm10.chr16 C 0 I 12 e canFam3.chr33 29051433 100 + 31377067 I e nomLeu3.chr11 120746213 87807 + 123690457 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=295905.000000 s hg38.chr3_KI270935v1_alt 97612 189 + 197351 CAggcctggagcggtggcttatgcctgtaatcccagcactttgggaggcagaggccggcggatcacctgaggtcaggagttcgagaccaggctgaccaacatggtgaaaccccatctctactaaaaatatgaaaattagctgggcgcagtggtgggcgcctgtaatcccagctacttgggagactgagg s ponAbe2.chr3 199754268 189 + 202140232 CAggccgagtgcggtggcttatgcctgtaatcccagcactttgggaggcagaggtgggcggatcacctgaggttagaagtttgagaccagcctgaccaatatgatgaaaccccatctctactaaaaatatgaaaattagctgggcttggtggcgggcgcctgtaatcccagctacttgagaggctgagg i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 7551 189 + 111706 CAggccgggagcggtggctcacgcctgtaacgccagcactttgggaggccgaggaggggaaatcacctgaggttaggagtttaagaccagcctgtccaacatagtgaaaccccgtctctactaaaaatttgaaaaggaaccgggcgtggtggcgcacgcctgtaataacagctaggccacaagctgagg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 42725 189 + 192460366 CAggccgggagcggtggctcacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaaccccgtctctactaaaaatttgaaaatgaaccgggcgtggtggcgcacgcctgtaataccagctactcgggaggctgagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39189 189 - 187378091 caggccgggagcggtggctcacgcctgtaacgccagcactttgggaggccgaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaaccccgtctctactaaaaatttgaaaatgaaccgggcgtggtggcgcacgcctgtaataccagctactcgggaggctgagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390411 189 - 91754291 CAggccgggagcggtggctcacgcctgtaacgccagcactttgggaggtggaggagggtaaatcacctgaggttaggagtttaagaccagcctggccaacatagtgaaaccccgtctctactaaaaatttgaaaatgaacggggcgtggtggtgcacgcctgtaataccagctactcaggaggctgagg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 905709 188 - 74750902 CGggctgggtgcggcggctcatgcctgtaatctcagcactttgggaggccgaggggggt-gaccacctaaggttaggagttcgagaccagcctggtcaacatggtgaaaccccgtctatattaaaaatacaaaaattagccaggtatagtagcacatgcctgtaattccagctactcaggaggctgagg i calJac3.chr17 C 0 C 0 e mm10.chr16 65415312 12 - 98207768 I e canFam3.chr33 29051433 100 + 31377067 I e nomLeu3.chr11 120746213 87807 + 123690457 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=107658.000000 s hg38.chr3_KI270935v1_alt 97801 47 + 197351 caggagaatcacttgaacccgggaggtggaggttacagtgagctgag s ponAbe2.chr3 199754457 47 + 202140232 caggagaatcacttgaacccgggaggcggaggttgcagtgagctgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834020 46 + 123690457 caggagaatcac-tgaacccgggaggtggaggttgcagtgagctgag i nomLeu3.chr11 I 87807 C 0 s rheMac3.chrUn_JH291127 7740 47 + 111706 caggagaatcgcttgagcccgggaggtggaggttgaagtgagccgag i rheMac3.chrUn_JH291127 C 0 I 28 s macFas5.chr2 42914 47 + 192460366 caggagaatcgcttgaacccgggaggtggaggttgaagtgagccgag i macFas5.chr2 C 0 I 28 s papAnu2.chr2 39378 47 - 187378091 caggagaatcacttgaacccaggaggtggaggttgaagtgagccgag i papAnu2.chr2 C 0 I 28 s chlSab2.chr15 390600 47 - 91754291 caggagaatcacttgaacccgggaggtggaggttgaagtgagccgag i chlSab2.chr15 C 0 I 67 s calJac3.chr17 905897 47 - 74750902 caggcgaactgcttgaacccaggaggtggaggttacagtgagctgag i calJac3.chr17 C 0 C 0 e mm10.chr16 65415312 12 - 98207768 I e canFam3.chr33 29051433 100 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=25761.000000 s hg38.chr3_KI270935v1_alt 97848 39 + 197351 ----------------------------acg-gagtgaaactccgtctcaaaaaaaaaaggtaag-ata s ponAbe2.chr3 199754504 37 + 202140232 ----------------------------atg-gagtgaaactccgtctcaaaaaaaaa--gtaag-ata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834066 38 + 123690457 ----------------------------aca-gagtgaaactccatctcaaaaaaaaaa-gtaag-ata i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7815 35 + 111706 ----------------------------atgagagtgaaactccatctcaaaaacaaa--caaac---- i rheMac3.chrUn_JH291127 I 28 C 0 s macFas5.chr2 42989 35 + 192460366 ----------------------------atgagagtgaaactccatctcaaaaacaaa--caaac---- i macFas5.chr2 I 28 C 0 s papAnu2.chr2 39453 35 - 187378091 ----------------------------acgagagtgaaactccatctcaaaaataaa--caaac---- i papAnu2.chr2 I 28 C 0 s calJac3.chr17 905944 67 - 74750902 atcacaccactgcactctggcctgggtgacaagagtgaaattccatatcaaaataatc--ataataata i calJac3.chr17 C 0 C 0 e mm10.chr16 65415312 12 - 98207768 I e canFam3.chr33 29051433 100 + 31377067 I e chlSab2.chr15 390647 67 - 91754291 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=15434.000000 s hg38.chr3_KI270935v1_alt 97887 9 + 197351 aaataagc----a s ponAbe2.chr3 199754541 13 + 202140232 aaataaacaaaTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834104 13 + 123690457 aaataaacaaaTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7850 9 + 111706 ----aaacaaata i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43024 9 + 192460366 ----aaacaaata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39488 9 - 187378091 ----aaacaaata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390714 9 - 91754291 ----aaacaaata i chlSab2.chr15 I 67 C 0 s calJac3.chr17 906011 9 - 74750902 ----aaacaaata i calJac3.chr17 C 0 C 0 e mm10.chr16 65415312 12 - 98207768 I e canFam3.chr33 29051433 100 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=32785.000000 s hg38.chr3_KI270935v1_alt 97896 16 + 197351 aaTACAGCGAAGGCTT s ponAbe2.chr3 199754554 16 + 202140232 AATACGGCGAAGGCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834117 16 + 123690457 AATACGGCAAAGTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7859 16 + 111706 aaTACAGCAAAGTCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43033 16 + 192460366 aaTACAGCAAAGTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39497 16 - 187378091 aatacagcaAAGGCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390723 16 - 91754291 aaTACAGCAAAGGGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 906020 16 - 74750902 aaCGTGGTGAAGGTAT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29051533 16 + 31377067 AATGGGGTGAAGGATT i canFam3.chr33 I 100 C 0 e mm10.chr16 65415312 12 - 98207768 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=594103.000000 s hg38.chr3_KI270935v1_alt 97912 206 + 197351 GGGAGTTTAAAGCTACATCTCTGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGTCAGCCTGTAGCCTCCACCTC--CACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCGCAGCTTGTTACCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA s ponAbe2.chr3 199754570 208 + 202140232 GGGAGTTTAAAGCTACATCTCGGAGGC----AACAGGGACTTCTCAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGTCAGCCTGTAGCCTCCACCTCCACACTTCCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGTTACCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834133 206 + 123690457 GGGAGTTTAAAGCTACATCTTTGAGGC----AACAGGGACTTCAAAGGGGAGAAGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGTCAGCCTGTAGCCTCCACCTC--CACTTCCTGTCACTCTGCACTTGGGCCTCATCTCTGTG----TATCCGCAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAATATTAATCACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 7875 209 + 111706 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGCCAGCCTGTAGCCTCCACCTC--CACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43049 209 + 192460366 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGCCAGCCTGTAGCCTCCACCTC--CACTTGCTGTCACTCTGCCCTTGGGCCTCATCTCTGTG----TATTCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39513 209 - 187378091 GGGAGTTTAAAGCTACATCTCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTTCATTGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGCCAgcctgtagcctccacctc--cactTGCTGTCACTCTGCCCTTGGGCCTCATCCCTGTG----TATCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390739 209 - 91754291 GGGAGTTTAAAGCTACATCCCTGAGGCAACAAACAGGGACTTCTCAGGGGAG-AGTCCAATGTCAGAGGCTGCTTGGTCAGTCCAGCTTCTGGCCAGCCTGTAGCCTCCACCTC--CACTTCCTGTCGCTCTCCCCTTGGGCCTCATCTCTGTG----TGTCCACAGCTTGCTCCCACCTTTCTGGGGGAGGTGGGAATACAAACATTAATCACAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 906036 199 - 74750902 GGGAGTTGAAAGCTCTATCTCTCAGGC----AACGGGGACTCCTCAGGGGAG-GACTCGTTGCCAGAGGCTGCCTGGTCAGTCCAGCTTC----CGGCCTGCAGCCTCCACCTG--CACCTCCCGTCACTCTGTCCTTGGGCCTCATCTCTGTG------TCCACAGCTTGTTCCCACTTTTCTGGAGGAGGTGGGAATACAAATGTTAATCACAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65415324 196 - 98207768 GGGAGTTTAAACCTTCATTTCTGAAAC----AACAGAAGCGTCTCAGAGA---GGCGCATTGTCAGCAACTCTCCCGTAAGGGCAGCTTGTGGGCAG-CTGGAGTGTCTGCCTC--TACTGC---TCATCTTCTCCTTATGGTGCATTCCTGAG----TATCTTTGCCTTGTT-CTACTTTTTTGGGCAAG--GGGAATAAAAATGTTAATCATga i mm10.chr16 I 12 I 545 s canFam3.chr33 29051549 202 + 31377067 GGGGGTTTAAAGCTACGTGTCTGAGAC----AACAGGTACTTCTCAGGGAAGAAGCCCCTTGTCAGAGGCTGCGT-GTCAGCCCAGCTTCTGGCCAGCCTGGAACCTCCACCTC--CACTTC---TGACACTGTCCTTGGGCCTCGTCCCTGTGGTATTATCCTCAGCTGGCCCTGGTCTGT---GGAGACGT-GAAATAAAAATATCCACGACAG i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=32212.000000 s hg38.chr3_KI270935v1_alt 98118 17 + 197351 CCACTCAATACATAAAG s ponAbe2.chr3 199754778 17 + 202140232 CCACTCAATACATAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834339 17 + 123690457 CCACTCAGTACAGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 8084 17 + 111706 CCACTCAATAAATAAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43258 17 + 192460366 CCACTCAATAAATAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39722 17 - 187378091 CCACTCAATAAATAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390948 17 - 91754291 TCACTCAATAAATAAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 906235 17 - 74750902 CCACTCAATAAATAAAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29051751 5 + 31377067 CCGCC------------ i canFam3.chr33 C 0 C 0 e mm10.chr16 65415520 545 - 98207768 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=163950.000000 s hg38.chr3_KI270935v1_alt 98135 66 + 197351 ATATTATTGAATATCTTTCATGTTATAGGCAGGGGTGATATAAACATGTTTCACACCCAGTAAGCA s ponAbe2.chr3 199754795 66 + 202140232 ATATTATTCAATATCTTTTGTATTGTAGGCAGGGGTTTTATAAACATGTTTCACACCCAGTAAGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834356 66 + 123690457 ATATTATTGAATATCTTTTGTATTGTAGGTAGGGGTGATATAAACACATTTCACAGCCAGTAAGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 8101 66 + 111706 ATATTATTGAATATCTTTTGTATTGTAGAAAGGGGTGATATAAACATGTTTCACACCCAGTAAGCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43275 66 + 192460366 ATATTATTGAATATCTTTTGTATTGTAGAAAGGGGTGATATAAACATGTTTCACACCCAGTAAGCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39739 66 - 187378091 ATATTATTGAATATCTTTTGTATTGTAGAAAGGGGTGATATAAACATGTTTCACACCCAGTAAGCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 390965 66 - 91754291 ATATTATTGAATACCTTTTGTATTGTAGGCAGGGGTGATATAAACATGTTTCACATCCAGTAAGCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 906252 64 - 74750902 ATATTGTTGAGTATCTTTTGTGTTGTAGGCA-GGGTGACATAAAAACGTTTCACACCCA-TGAGCG i calJac3.chr17 C 0 C 0 s mm10.chr16 65416065 66 - 98207768 ATGTTATTGTATATCTTTTTTATTCTAGGTAAGATTAATATAAAAACACTTTGCAGTCAGTAGGCA i mm10.chr16 I 545 I 1400 s canFam3.chr33 29051756 52 + 31377067 ---TTACCGAACATCACTCATGTGCCAGGGAGAAGTGAGAGAGAAA-------CCCTCAGGA---- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=82892.000000 s hg38.chr3_KI270935v1_alt 98201 40 + 197351 CTGGCCCCAGCAGAACGTTCTCTCCGgtgccaggcagtgt s ponAbe2.chr3 199754861 40 + 202140232 TCGGCCCCAGGTGAACATTCTCTCCAgtgccaggcagtgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834422 40 + 123690457 TTGGCCCCAGCTGAACATTCTCTCTGATGCCAGGCAGTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 8167 40 + 111706 TTGGCCCCCGCTGAACGTTCTCTCTGATGCCAGGCAGtgt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 43341 40 + 192460366 TTGGCCCCCGCTGAACGTTCTCTCTGATGCCAGGCAGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39805 39 - 187378091 TTGGCCCCCGCTGAACGTTCTCTCTGATGCCAGGCAGTG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 391031 40 - 91754291 TTGGCCCCCGCTGAACGTTCTCTCTGATGCCAGGCAGtgt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 906316 28 - 74750902 TTGGCACCAGCTGAAGGTTCTCTCTGAT------------ i calJac3.chr17 C 0 C 0 s canFam3.chr33 29051808 34 + 31377067 ------CCGGCTGTGCGTGCTTGCTGACGTCAGGCAGTAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=10187.000000 s hg38.chr3_KI270935v1_alt 98241 24 + 197351 gccaccagctttgcatatgttatc s ponAbe2.chr3 199754901 24 + 202140232 gccaccagctttgcatatgttatc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834462 24 + 123690457 GCCACCAGCTTTGCATATGttacc i nomLeu3.chr11 C 0 T 2473 s macFas5.chr2 43381 14 + 192460366 GATGCCAG----GCA-Gtg----- i macFas5.chr2 C 0 C 0 s calJac3.chr17 906344 24 - 74750902 GCCGCCAGCTCTGCATATGCTCTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29051842 24 + 31377067 CATGCGAGCTTCGCAGGGGTTACC i canFam3.chr33 C 0 I 1536 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e chlSab2.chr15 391071 0 - 91754291 C e papAnu2.chr2 39844 0 - 187378091 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=6066.000000 s hg38.chr3_KI270935v1_alt 98265 27 + 197351 tgatGCCAGGCAGTGTGCCACCGGCTT s macFas5.chr2 43395 25 + 192460366 tgatgccaggca--gtgccaccagctt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39844 25 - 187378091 TGATGCCAGGCA--GTGCCACCAGCTT i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e ponAbe2.chr3 199754925 0 + 202140232 C e nomLeu3.chr11 120834486 2473 + 123690457 T e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=3671.000000 s hg38.chr3_KI270935v1_alt 98292 13 + 197351 TGTATATGTTATC s nomLeu3.chr11 120832013 13 + 123690457 TGAACATTCTCTC i nomLeu3.chr11 T 2473 C 0 s macFas5.chr2 43420 13 + 192460366 cgtgtatgttatc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39869 13 - 187378091 CGTGTATGTTATC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=7225.000000 s hg38.chr3_KI270935v1_alt 98305 81 + 197351 TGATGCCAGGCAGTGTGCCACCGGCTTTGCATATGTTATCTGATGCCAGGCAGTGTACCACCAGCTTTGCATATGTTATCT s nomLeu3.chr11 120832026 81 + 123690457 TGATGCCAGGCAGTGTGCCACCAGCTTTGCATATGttacctgatgccaggcagtgtgccatcagctttgcatatgttatct i nomLeu3.chr11 C 0 T 40 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e macFas5.chr2 43433 0 + 192460366 C e papAnu2.chr2 39882 0 - 187378091 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=3436.000000 s hg38.chr3_KI270935v1_alt 98386 40 + 197351 GATGCCAGGCAGTGTACCACCGGCTTTGCATATGTTATCT s nomLeu3.chr11 120832067 40 + 123690457 gatgccaggcagtgtgccatcagctttgcatatgttatct i nomLeu3.chr11 T 40 T 40 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e macFas5.chr2 43433 0 + 192460366 C e papAnu2.chr2 39882 0 - 187378091 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=3407.000000 s hg38.chr3_KI270935v1_alt 98426 37 + 197351 GATGCCAGGCAGTGTGCCACCAGCTTTGCATATGTTA s nomLeu3.chr11 120832067 37 + 123690457 gatgccaggcagtgtgccatcagctttgcatatgtta i nomLeu3.chr11 T 40 I 2382 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e macFas5.chr2 43433 0 + 192460366 C e papAnu2.chr2 39882 0 - 187378091 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=91.000000 s hg38.chr3_KI270935v1_alt 98463 1 + 197351 T s nomLeu3.chr11 120834486 1 + 123690457 t i nomLeu3.chr11 I 2382 C 0 e rheMac3.chrUn_JH291127 8207 0 + 111706 C e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e chlSab2.chr15 391071 0 - 91754291 C e macFas5.chr2 43433 0 + 192460366 C e papAnu2.chr2 39882 0 - 187378091 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=17695.000000 s hg38.chr3_KI270935v1_alt 98464 39 + 197351 GAtgccaggcagtgtgccaccagctttgcatatgttatc s nomLeu3.chr11 120834487 39 + 123690457 gatgccaggcagtgtgccatcagctttgcatatgttatc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 8207 37 + 111706 gatgccaggca--gtgccaccagcttcgtgtatgttatc i rheMac3.chrUn_JH291127 C 0 C 0 s chlSab2.chr15 391071 37 - 91754291 gatgccaggca--gtgccaccagcttcgtgtatgttatc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906368 0 - 74750902 C e macFas5.chr2 43433 0 + 192460366 C e papAnu2.chr2 39882 0 - 187378091 C e ponAbe2.chr3 199754925 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=215932.000000 s hg38.chr3_KI270935v1_alt 98503 92 + 197351 tcctctatttaaccttcaaaacagccttaggaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCTCTGGAAAG s ponAbe2.chr3 199754925 92 + 202140232 tcctctatgtaaccttcagaacagccttaggaggtgggtaacatgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834526 92 + 123690457 tcctctatttaaccttcaaaacagccttatgaggtgggtaacacgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 8244 92 + 111706 tcctctatttaaccttcaaaacagccttaggaggtgggtaacacgaccgcatctgatagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i rheMac3.chrUn_JH291127 C 0 I 729 s macFas5.chr2 43433 92 + 192460366 tcctctatttaaccttcaaaacagccttaggaggtgggtaacacgaccgcatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 39882 92 - 187378091 TCCTCTATTTAGCCTTCAAAACAGCCTTAGGAGGTGGGTAACACGACCGCATCTGACAGGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 391108 92 - 91754291 tcctctatttaaccttcaaaacagccttagaaggtgggtaacatgaccccatctgacagGGTTAAAGATGGTAGCTAAACTGCCCTGGAAAG i chlSab2.chr15 C 0 I 722 s calJac3.chr17 906368 90 - 74750902 TCCTCTACTTAACCTTCC-AGCAGCCTTGTGAGGT-GGTAACACGACCCCAGCTGACAGGGTTAGAGACGGCAGCTAAACTGCTCTGGAAAG i calJac3.chr17 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=877.000000 s hg38.chr3_KI270935v1_alt 98595 4 + 197351 tgaa- s ponAbe2.chr3 199755017 4 + 202140232 tgaa- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834618 4 + 123690457 tgaa- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 43525 3 + 192460366 -AAA- i macFas5.chr2 C 0 I 738 s papAnu2.chr2 39974 3 - 187378091 -AAA- i papAnu2.chr2 C 0 I 761 s calJac3.chr17 906458 4 - 74750902 -AAAA i calJac3.chr17 C 0 I 1955 e rheMac3.chrUn_JH291127 8336 729 + 111706 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e chlSab2.chr15 391200 722 - 91754291 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=302497.000000 s hg38.chr3_KI270935v1_alt 98599 1216 + 197351 ggggtggcctgcccctccacacctgtgggtatttctagtcgggtgggatgagagactgagaaaagaaataaggcacagagacaaagtatagagaaacaacagtgggcccaggggaccgtcgctcagcataccaaggacctgcaccggcaccagtctctgagttttctcagtttttattgattattattttcattattttagcaaaaaggaatgtagtaggagagcagggtgataataaggagaaggtcagcaagaaacatgtgagcaaaagaatctgtgtcataattaagttcaagggaagatactatgcctggatgtgcacgtaggccagatttatgtttctctccacccaaacatctcagcagagtaaagaataataaagcagcattgctgcaaacatgtctcacctcccgccacagggtggtttttctcctgtctcagaattgaacaaatgtacaatcgggttttatactgagacattcagttcccaggggcaggcaggagacagtggccttcctctatctcaactgcaagaggagatcctcttttactaatccacctcagcacagaccctttacgggtgtcagcctgggggacggtcaggtctttgtcatcccacaaggccatatttcagactat-acatggggagaaagcttggacaataacctgctttcaagggcagaggtccctgcggctttccacagtgcattgtgcccctggtttattgagactagagaatggcgatgacttctaccaagtatactgcttgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttttatgagctcaaggttggggcaaagttacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggagtctc--atgtctttcctttctacagagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATACtttattatttgttgattagataagacattcatatgatttgaaatggaaaggtacgaaaaggttcaccataaaatgcctttctcccctggctgtgcccccacccag---ttctctccacacatgtaacccgtgagattgtctcttgtgtgtaattttctgcacatgaaatgtacatacggaagcaaatatatgtgactatttCATCCTCCtctttt s ponAbe2.chr3 199755021 1215 + 202140232 ggggtggcctgcccctccacacctgtgtgtatttctagtcgggtgggatgagagacttagaaaagaaatgagacacagagacaaagtatagagaaacaacagtgggcccagaggaccggcactcagcacaacaaggacctgcaccggcaccggtctctgagatttctcagtttttattgattattattttcattattttagcaaaaaggaatgcagtaggagagcagggtgataataaggagaaggtcagcaaaaaacatgtgagcaaaagaatctacatcataattaagttcaagggaaggtactatgcctggacgtgcacgtaagccagatttatgtttctctccaccggaacatctcagcagagtaaagaataacaaggcagcattgctgcaaacatgtctcacctcctgccatagggcggtttttcttctatctcagaattgaacaaatgtacaattgggttttataccaagacattcagttcccaggggcaggcaggagacagcggccctcctctatctcagctgcaagaggctttcctcttttactaatccacctcagcacagaccctttatgggtgtcgggctgggggatggtcaggtctttctcatcccacgaggccatgtttcagactatcacatggggagaaaccttgcacaataccccgctttcaagggcagaggtccctgcggctttctgcagtgcattgtgcccctggtttattgagactagagaatggcgataacttttaccaaggatactgcttgtaaacattttgttaacaaggcacgtcctgcacagccctaaatcccttaaaccttgattttatacaacacatgtttttgtgagctcaaggttggggcaaagttacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggagtctcttatgtctttcctttctacgtagacacagtaacagtctgatcgctccttcttttccctGGAAAGAAAAATACTTTATTATTTGTTGATTAGATAAGACATTCATATGATCTGAAATGGAAAGGCACAAAAAGGTTCGCCATAAAATATCTTTCTCCCCTGGCTGTGCCCCCACCCAG---TTCTCTCCACACATGTAACCCGTGAGATTGTCTCTTGTGTGCAATTTTCTGCAAATGAAATGTACATACGGAAGCAAATATATGTGTCTAtttcatcttcctc---- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120834622 1212 + 123690457 ggggtggcctgcccctccacagctgtgggtatttctagttgggt-ggacaagagac--agaaaagaaataagacacagagacaaagtatagagaaacaacagtgggcccaggggaccggcgctcagcacaccaaggacctgcaccagcaccggcctctgagttccctcagtttttattgattattattttcattatttcagcaaaaaggaatgtagtaggagagcagggtgataataagg---aggtcagcaaaaaacatgtgagcaaaagaatctatgtcataattaagttcaagggaaggtactatgcctggacgtgcacgtaggccagatttatgtttctctccacccaaacatctcagtggagtaaagaataacaaggcagcattgctgccaacatgtctcgcctcccaccacagggcggttttt---ctatctcagaattgagcaaatatgcgatcgggttttataccgagacattcagttcccaggggcaggcaggagacagtggccttcctctctctcaactgcaagaggctttcctcttttactaatccacctcagcacagaccctttacgggtgtcaggctgggggacggtcaggtctttctcatcccacgaggccatatttcagactatcacatggggagaaacctgggacaatatcccgctttccagggcagaggtccctgcggctttccacagtgcatggtgcccctggtttattgagactagagaatggagatgacttttaccaagtatactgcctgtaaacattttgttaacaaggcacgtcctgcacagccctagatcccttaaaccttgattttatacaacacatgtttctgtgagctcgaggttggggcaaagctacaaattaacaacatctcagcaaagcttgtttaaagtacaggtctttttcaaaatggagtctctcacgtctttcctttcgacatagacacagtgacagtctgatcgctccttcttttccctGGAAAGAAAAATAC-TTAttatttgttgattagataagacactcatatgattggaaatggaaaggtacaaaaaggtacaccattaaatgtctttctgccctggccgtgcccccacccggcacttctcttcacacatgtaacccgtggggttgcctcttgtgcgtcattttctgcatatgaaatgtacatacggaagcaaatatatgtgtctatttcatcctcctctttt i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 8336 729 + 111706 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e chlSab2.chr15 391200 722 - 91754291 I e macFas5.chr2 43528 738 + 192460366 I e papAnu2.chr2 39977 761 - 187378091 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=819.000000 s hg38.chr3_KI270935v1_alt 99815 3 + 197351 ttt s nomLeu3.chr11 120835834 3 + 123690457 ttt i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 391922 3 - 91754291 ttt i chlSab2.chr15 I 722 C 0 e rheMac3.chrUn_JH291127 8336 729 + 111706 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e macFas5.chr2 43528 738 + 192460366 I e papAnu2.chr2 39977 761 - 187378091 I e ponAbe2.chr3 199756236 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=1092.000000 s hg38.chr3_KI270935v1_alt 99818 2 + 197351 tt s nomLeu3.chr11 120835837 2 + 123690457 tt i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 40738 2 - 187378091 tt i papAnu2.chr2 I 761 C 0 s chlSab2.chr15 391925 2 - 91754291 tt i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 8336 729 + 111706 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e macFas5.chr2 43528 738 + 192460366 I e ponAbe2.chr3 199756236 0 + 202140232 C e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=66423.000000 s hg38.chr3_KI270935v1_alt 99820 71 + 197351 tttttt--------------------ttttttgagac--agtttcgctcttgttgcccaggttggagtgtagtgctgcgatctcagatcacca s ponAbe2.chr3 199756236 73 + 202140232 tttttt--------------------ttttttgagacagagtttcgctcttgttgcccacgttggagtgtagtgctgcgatctcagatcacca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120835839 93 + 123690457 ttttttttttttggtttttttttttgttttttgagaaagagtttcgctcttgttgcccaggctggagtgtaatgctgcgatctcagctcacca i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 44266 72 + 192460366 tttttt--------------------ttttttgagatggagtctcactc-tgtcacccagtctggagtgcagtggcgtgatctcgactcactg i macFas5.chr2 I 738 C 0 s papAnu2.chr2 40740 72 - 187378091 tttttt--------------------ttttttgagatggagtctcactc-tgtcacccagtccggagtgcagtggcgtgacctcgactcactg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 391927 72 - 91754291 tttttt--------------------ttttttgagatggagtctcactc-tgtcacccaggctggagtgcagtggcgtgatctcgactcactg i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 8336 729 + 111706 I e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=27019.000000 s hg38.chr3_KI270935v1_alt 99891 17 + 197351 caacctccgcctcccag s ponAbe2.chr3 199756309 17 + 202140232 caacctccgcctcctag i ponAbe2.chr3 C 0 I 433 s nomLeu3.chr11 120835932 17 + 123690457 caacctctgcctcccag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9065 17 + 111706 caacctccacctccagg i rheMac3.chrUn_JH291127 I 729 C 0 s macFas5.chr2 44338 17 + 192460366 caacctccacctccagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 40812 17 - 187378091 cagcctccacctcctgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 391999 17 - 91754291 caacctccacctccagg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=187435.000000 s hg38.chr3_KI270935v1_alt 99908 121 + 197351 gttcaggcgattctcctgcctcagcctcctgagtagctgggattacaggcacgcaccaccatgcccggctcatttt-gtgtttttagtaaagacgggatttc-tccatgttggtcaggctggt s ponAbe2.chr3 199756759 122 + 202140232 gttcaagcaactctcctgcctcagcctcctgagtagctgggatgacaggcgtgagctaccacgcctggctgatttttgtatttttagtagagatggggtttc-acaatgctggccaggctggt i ponAbe2.chr3 I 433 C 0 s nomLeu3.chr11 120835949 121 + 123690457 gttcaggcgattctcctgcctccgcctcctgagtagctgggattacaggcatgcaccaccatgcccggctcatttt-gtatttttagtaaagacggggtttc-tccatgttcgtcaggctggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9082 123 + 111706 gctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacacccagctgatttttgtatttttagtagagacagggtttctactatgctggccaggctggt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 44355 123 + 192460366 gctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacacccagctgatttttgtatttttagtagagacaggttttctactatgctggccaggctggt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 40829 123 - 187378091 gctcaggtgatcctcccacttcagcctcctgagtagctgggattacaggcgtgagccaccacgcccagctgatttttgtatttttagtagagacagggtttctactatactggccaggctggt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392016 122 - 91754291 gctcagatgatcctcccacttcagcctcctgagtagctggaatgacaggcgtgagccaccacgtccagctgatttttgtatttttagtagagacagggtttc-accatgctggccaggctggt i chlSab2.chr15 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e calJac3.chr17 906462 1955 - 74750902 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=101456.000000 s hg38.chr3_KI270935v1_alt 100029 49 + 197351 ctcaaactcccgatctcaggtgatccacctgcctctgcctcccaaagtg s ponAbe2.chr3 199756881 49 + 202140232 ctcgaactcctggcctcaggtgatccacctgccttggcctcccaaagtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836070 49 + 123690457 ctcaaactcccaacctcaggtgatccacctgcctcggcctcccaaagtg i nomLeu3.chr11 C 0 I 293 s rheMac3.chrUn_JH291127 9205 49 + 111706 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 44478 49 + 192460366 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 40952 49 - 187378091 ctcgaactcctgacctcaggtgatccacctgcctcgccctcccaaagtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392138 49 - 91754291 ctcgaactcctgacctcaggtgatccacctgccttgccctcccaaagtg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908417 49 - 74750902 ctccacctccagggctcaggtgatcctcccacctgagcctcctgagtag i calJac3.chr17 I 1955 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=33370.000000 s hg38.chr3_KI270935v1_alt 100078 15 + 197351 ctgggatgacaggtg s ponAbe2.chr3 199756930 15 + 202140232 ctgggattacaggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836412 15 + 123690457 ctgggatgacaggtg i nomLeu3.chr11 I 293 C 0 s rheMac3.chrUn_JH291127 9254 15 + 111706 ctgggattacaggcg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 44527 15 + 192460366 ctgggattacaggcg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41001 15 - 187378091 ctgggattacaggcg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392187 15 - 91754291 ctgggattataggcg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908466 15 - 74750902 ctgggacaacaggcg i calJac3.chr17 C 0 C 0 e mm10.chr16 65416131 1400 - 98207768 I e canFam3.chr33 29051866 1536 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=32663.000000 s hg38.chr3_KI270935v1_alt 100093 13 + 197351 tgagccactgcgc s ponAbe2.chr3 199756945 13 + 202140232 tgagccactgcgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836427 13 + 123690457 tgagccaccgcgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9269 13 + 111706 tgagccaccgccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 44542 13 + 192460366 tgagccaccgccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41016 13 - 187378091 tgagccaccgccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392202 13 - 91754291 tgagccaccacac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908481 13 - 74750902 tgagccaccacac i calJac3.chr17 C 0 C 0 s mm10.chr16 65417531 13 - 98207768 TGAGTCACTGTGG i mm10.chr16 I 1400 C 0 e canFam3.chr33 29051866 1536 + 31377067 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=458755.000000 s hg38.chr3_KI270935v1_alt 100106 152 + 197351 ccagccCTGATTTTCATCT--TACTGTTCTCCATTTGCAGGTGAAAATGGAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCTTCCCCGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGTGGGCACTTTCCGGGCC s ponAbe2.chr3 199756958 152 + 202140232 ccagccCTGATTTTGATCT--TACTGTTCTCCATTTGCAGGTGAAAATGGAGGTTCCCTCCTCCTGAGGCTGAGTGTGGCTTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGCGGGCACTTTCCGGGCG i ponAbe2.chr3 C 0 I 410 s nomLeu3.chr11 120836440 152 + 123690457 ccagccctgattttCATCC--TACTGTTCTCCATTCGCAGGTGAAAATGGAGGCTTCCTTCTCCTGCGACTGAGTGTGGCCTCCCTGGAAGACCTCACTGACCCCAGAGTGGCAGAAAGGCTGATGCAGCAGGTGAGCAGGCACTTTCCAGGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9282 152 + 111706 ccagccCTGATTTTCATCT--TACTGTTCTCCATTTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 44555 152 + 192460366 ccagccCTGATTTTCATCT--TACTGTTCTCCATTTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41029 152 - 187378091 ccggccctgATTTTCATCT--TACTGTTCTCCATTTGCAGGTGAAAATGCAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCAGTGACCCCAGAGTGGCAGAGAGGCTGATGCGGCAGGTGAGTGGACACTTTCTGGGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392215 152 - 91754291 ccagccCTGATTTTCATCT--TACTGTTCTCCATTTGCAGGTGAAAATGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCCGGAAGACCTCACTGACCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGTGAGTGGACACTTTCTGGGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908494 131 - 74750902 ctggcCCCAA-TTTCATCT--TACTGTCCTCCATCTGCAGGTGAAAACGTAGGTTTCCTCCTCCTGCGGCTGAGTGTGGCCTCCCTGGAAGACCTCACTAATCCCAGAGTGGCAGAGAGGCTGATGCAGCAGGT-------------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65417544 138 - 98207768 TT-GCATTGCCTCTGGTCT--T----TTCTCAACTTTTAGGTGAAGATGGAGGCTTCCTCCTTGTACGGCTGACCGTGGCCTCCCCTAAGGACCTCACTGAGCACAACGCCAGAGAGAAGCTGATGAACCAGGTACATGTACACC--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29053402 154 + 31377067 CTGACCCACGTTCTCATCTCCTGCTTTCCTAAACCCGCAGATGGGGATGGAGGCTTTTTCCTCCTGCGGCTGAGTGTGGCCTCCCCAGAAGACCTCACTGACCCCAGAGTGGCAGAGAGGCTGGTGCAGCAGGTAAGGGAGCACTCTCGGGGCC i canFam3.chr33 I 1536 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=423216.000000 s hg38.chr3_KI270935v1_alt 100258 201 + 197351 AGGGGAGTAGAGGAAGGGGCGAGGTTCGCAGGGGCTGCAGGGAAGACCCGCAGGACACAGAAGAGCAGCTACCGCGCTTGGAAGGGAGTCTCGTTTCTTACGGAGAATTGGGAGCTGAATCTGAGGATCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-ATT-TCCTTCTCTGCAATGTAAACATGTGACT s ponAbe2.chr3 199757520 196 + 202140232 GGGGGAGTAGAGGAAGGGGCGAGGT-CGCAGGGGCTGCTGGGAAGACCCACAGGGCACAGAACAGCAGCTGCCGCACTTGGAAGGGAGTCTCGTTTCTTATGGAGAATTAGGAGCTGAATCTGAGGATCT--GCCTGGCTTTGCTTCTG--TTGCTGCTCCGAGTTCTTA-ATT-TCCTTCTCTGCAATGTAAACACGTGACT i ponAbe2.chr3 I 410 C 0 s nomLeu3.chr11 120836592 199 + 123690457 AGGGCAGTAGAGGAAGGGGTGAGGTTTGCAGGGGCTGCCGGGAAGACCCGCAGGACACAGAAGAGCAGCTACCACATTTGGAAGGGAGTCTCGTTTCTTACGGATAATTAGGAGCTGAATCTGAGGGTCTCTGCCTGGCTTTGCTTCTG--TGCCTTCTCCGAGTTCTTC-ATT-TCCTTCTCTGCAATGTAAACACGTGACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9434 201 + 111706 AGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGGGCTGCCGGGAAGACCCTCGGGACACGGAATCGCAGCTACCGCACTTGGAAGGGAGTCTCGTTTCTTACAGAGAATTGGGAGCTGCATCGGAGGATCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTT-TCCTTCTCTGCAGTGTAGACACATGACT i rheMac3.chrUn_JH291127 C 0 I 21 s macFas5.chr2 44707 201 + 192460366 AGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGGGCTGCCGGGAAGACCCGCGGGACACGGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCGTTTCTTACAGAGAATTGGGAGCTGCATCGGAGGATCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTT-TCCTTCTCTGCAGTGTAGACACATGACT i macFas5.chr2 C 0 I 1 s papAnu2.chr2 41181 201 - 187378091 AGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGGGCTGCCGGGAAGACCCGCGGGACACGGAAGAGCAGCTGCCGCACTTGGAAGGGAGTCTCGTTTCTTACAGAGAATTGGGAGCTGCATCGGAGGATCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCCGAGTTCTTC-GTT-TCCTTCTCTGCAGTGTAAACACATGACT i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 392367 201 - 91754291 AGGGGAGTAGAGGAAGGCGTGAGGTTTGCAGGGGCTGCCGGGAAGACCCACGGGACACAGAAGAGCAGCTACCGCACTTGGAAGGGAGTCTCGTTTCTTACAGAGAATTGGGAGCTGAATCGGAGGATCTCTGCCTGGCTTTGCTTCTGCCTGCCTTCTCTGAGTTCTTC-GTT-TCCTTCTCTGCAATGTAAACACATGACT i chlSab2.chr15 C 0 I 2 s calJac3.chr17 908625 191 - 74750902 ----GAGTAGAGGAAGGTGTGAGGTTGGCAGGGG-TGCAGGAAACGTCTGCGGGGCACAAAAGAGCAACCACTGCACATGGAAGGGAG-CTCG-CTCTTACAGAGAA--GGAGGCTTGGGAAGGAGGCCCCTGCCTGGC-TGGCTTCTGCCGGCCTTCTCCGAGCTCCTC-ATT-TCCTTCTCTGCAATGTGAACACGCGACT i calJac3.chr17 C 0 I 2 s mm10.chr16 65417682 168 - 98207768 --------AGGAGTAAGTGAGGGTCTCTTGGGAACTCCAGGGAGCATCTTCAGGGCAAGGGAGGTCAATGACTCCA--TGAAAGGGCATT--------------------AGGGCTGAA-CAGGGGCTCT-TGCCTGGCTTTGATCTCGCCAAGCTTCTC--AGTTCTTCTGAT-CTCTTTTCTGCCATGTGAATAAATACAT i mm10.chr16 C 0 I 3 s canFam3.chr33 29053556 106 + 31377067 --------------------------------------AGGAAAGA---------------------------------GGAAGCGAGT-----------------ATTAGGAACTAAA--------TATCTGCTTGGCTTGGCTTCTGCCTATTTTTCCTGAGTTGGGA-ATTCCCCTTCTGTGCTACGTAAAAAGATTCTT i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=-6754.000000 s hg38.chr3_KI270935v1_alt 100459 5 + 197351 --CCT--AG s ponAbe2.chr3 199757716 5 + 202140232 --CCC--AG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836791 5 + 123690457 --GCC--GG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 44909 5 + 192460366 --CCCAA-- i macFas5.chr2 I 1 I 15 s papAnu2.chr2 41383 3 - 187378091 --CCC---- i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 392570 3 - 91754291 --CCC---- i chlSab2.chr15 I 2 C 0 s calJac3.chr17 908818 3 - 74750902 --CGC---- i calJac3.chr17 I 2 C 0 s mm10.chr16 65417853 3 - 98207768 --CCC---- i mm10.chr16 I 3 C 0 s canFam3.chr33 29053662 5 + 31377067 TCCCT---- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 9635 21 + 111706 I e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=339172.000000 s hg38.chr3_KI270935v1_alt 100464 145 + 197351 AGCCCCCAGT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCTCTGAGGCAAAGGTCAGTGATACTGATGGGAGGGTAGGTCggactcttggttgcaagtggcagaaacccaagtcagggcagtttatgcaaaaaaaaaaaaa s ponAbe2.chr3 199757721 145 + 202140232 AGCCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGCGAAGGTCGGTGATATTGATGGGAGGGGAGGCCggactcttggttgtaagtggcagaaacccaagtgagagcagtttatgcaaaaacaaacaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836796 145 + 123690457 AGCCCCCAAT----TTCTTCTGGTCCTGGGAAGCTT-GGCCTTCTGGCCCCTGAGGTGAAGGTCAGTGATATTGATGGGAGGGtaggccggactcttggttgcaagtggcagaaacccaagtcagagcagtttatgcaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9656 133 + 111706 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATATTGATGGGAG-Gtaggcaggactcttggttgtaagtggcagaaacccaagtcagagcagtttatg--aaaaa------- i rheMac3.chrUn_JH291127 I 21 C 0 s macFas5.chr2 44929 135 + 192460366 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATATTGATGGGAG-Gtaggcaggactcttggttgtaagtggcagaaacccaagtcagagcagtttatgaaaaaaa------- i macFas5.chr2 I 15 C 0 s papAnu2.chr2 41386 136 - 187378091 AACCCCCAAT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCAGTGATATTGATGGGAGCGTAGGCAGGACTCTTGGTTGTAAGTGGCAGAAACCCAAGTCAGAGCAGtttatgaaaaaaa------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392573 133 - 91754291 AACCCGCACT----TTCTTCTGGTCCTTGGAAGCTT-GGCC--CTGGCCCCTGAGGAGAAGGTCGGTGATATTGATGGGAGAGtaggcaggactcttggctgtaagtggcagaaacccaagtcagagcagtttatg---aaaa------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908821 130 - 74750902 -AACCCCAAC----TTCTTCCGGTCCTTGGAAGCTT-GGCCTTCTGGCCCCTGAGGAGATGGTCAGTGATACGGAGGGACG-Gtaggcaggactcttggttgcaagtggcagaaacccaagttatagcattttatac------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65417856 125 - 98207768 AGCCCCAGATCCAATTTTTCAGGTCTTGGGAGTGCA-GGCCTTTT----------GAAAGAGCCAATGATATTAATGGGAAAGTAAGCAGAGAtttgggttgcaagaagcaggaa-ccagggcatggtagtttactt------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29053667 132 + 31377067 CGCCCCCAAT----TTCCTCAGGCCATAGGAAGTTCAGGCCTTCTATCCCTTG-GGAGAAGATCAATGATATTAACGGGCAGAtaggcaggact-ttggttataaggagcagacacccaactcatcgtagcttataca------------ i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 58456 2322 + 103936 I a score=515378.000000 s hg38.chr3_KI270935v1_alt 100609 156 + 197351 aaaaaaaaaaggcaaggtctgagaaacctacaagtgtctctt-cagcttcag-tac-ggctggatccagcagctccagcgccatcacagggactttctctttctttccctgtcttagctttact-cccttcattcttcagagtctttcttcatgtgtatg s panTro4.chr3_GL389630_random 60778 156 + 103936 AAAAAAAAAAGGCAGGGTctgagaaacctagaagtgtctctt-cagcttcag-tac-ggctggatccagcagctccaatgccatcacggggactttctctttctctccctatcttagctctact-cccttcattcttcagagtctttcttcatatgtatg i panTro4.chr3_GL389630_random I 2322 C 0 s ponAbe2.chr3 199757866 149 + 202140232 ----caaaaaggcaaggtctgagaaacctagaagcatctctt-cagcttcag-tat-ggctggatccagcagctccaacactatcatggggattttctctttctcTCCCTG---TACCTCTACT-CCCTTCATTCTTCAGAGTCTTTTTTCATATGTATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120836941 154 + 123690457 aaaaaaaaaaagcaaggtctgaggaacctagaagcttctctt-cagcttcag-tac-ggctggatccagcagcttcaacgcgatcacgggggctttctctttctctcgctgtcttagctctact-cccttcATTCTT--GAGTCTTTCTTCATATGTATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9789 156 + 111706 aaaaaaaaaaggcaaggtctgagaaacctagaagcatctcct-cagcttcag-tat-ggctggatccggcaactcaaaggtgatcacggggattttctctttctctccccgtcttagctctact-cccttcATTCTTCAGAGTCTTTCTTTATATGTATG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45064 156 + 192460366 aaaaaaaaaaggcaaggtctgagaaacctagaagcatctcct-cagcttcag-tat-ggctggatccggcaactcaaacgtgatcacggggattttctctttctctccccgtcttagctctact-cccttcATTCTTCAGAGTCTTTCTTTATATGTATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41522 157 - 187378091 acaaaaaaaaggcaaggtCTGAGAAACCTAGAAGCATCTCCT-CAGCTTCGG-TAT-GGCTGGATCCAGCAGCTCAAACGCGATCACGgggattttctctttctccccccGTCTTAGCTCTACTCCCCTTCATTCTTCAGAGTCTTTCTTTATATGCATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392706 156 - 91754291 aaaaaaaaaaggcaaggtctaagaaacctagaagcatctcct-gagcttcag-tat-ggctggatccggcaactcaaacgcgatcacggggattttctctttctctccctgtcttagctcaact-cccttcATTCTTCAGAGTCTTTCTTCATATGTATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 908951 152 - 74750902 --aaaaaacaggcaagctctgagaaacctggaagagtctcttccaccttcagttat-ggctggaccctgcagctcagatgtggccgtggggattt--tctttctctccctgcctcagctgtact-ccctttattcttc--agtctTTCTTCATGCATATG i calJac3.chr17 C 0 C 0 s mm10.chr16 65417981 147 - 98207768 ----ggaaaagtcaaggtctgagaaatctacaggtggctcctccagctttgg-agtcagctggagccagcagtgcaaacacaatcat-gagatttcctctgtcccactc------agctctgtg-cccttcattcttcatggactttctccaTACATATG i mm10.chr16 C 0 I 1147 s canFam3.chr33 29053799 151 + 31377067 gaaaagggaaggtagtggctgagacacctagaagtgactgttcaagcttcagttct-ggctggatccagcagctcagatgcgctcatccgggttttctctttctttacctctcttag--------ctctTCGTTGTTCAGAATCTCTCTCCATATGTAAG i canFam3.chr33 C 0 C 0 a score=120997.000000 s hg38.chr3_KI270935v1_alt 100765 37 + 197351 aaaaggcagccTTGTTAGCCATAGATTCACAAGGGAC s panTro4.chr3_GL389630_random 60934 37 + 103936 aaaaggcagccTTGTTAGCCATAGATTCACAAGGGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758015 37 + 202140232 AAAAGGCAGCCTTGTTAGCCACAGATTCACAAGGCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837095 37 + 123690457 AAAAGGCAGCCTTGTTAGCCGTAGATTCACAAGGCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9945 37 + 111706 AAAAGGCAGCTTTGTTAGCCATAGATTCACAAGGCAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45220 37 + 192460366 AAAAGGCAGCTTTGTTAGCCATAGATTCACAAGGCAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41679 37 - 187378091 AAAAGGCAGCTTTGTTAGCCATAGATTCACAAGGCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392862 37 - 91754291 AAAAGGCAGCCTTGTTAGCCATAGATTCACAAGGCAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909103 37 - 74750902 AAAAGGCGGCCTTGTTAGCCCTAGATTCACGAGGCAC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29053950 34 + 31377067 GAAAGTTGGCTGTGACAGCCC--GAGTCAT-AGGCAC i canFam3.chr33 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I a score=13752.000000 s hg38.chr3_KI270935v1_alt 100802 4 + 197351 TTCC s panTro4.chr3_GL389630_random 60971 4 + 103936 TTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758052 4 + 202140232 TTCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837132 4 + 123690457 TTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9982 4 + 111706 TTCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45257 4 + 192460366 TTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41716 4 - 187378091 TTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392899 4 - 91754291 TTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909140 4 - 74750902 TTCC i calJac3.chr17 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I e canFam3.chr33 29053984 0 + 31377067 C a score=723361.000000 s hg38.chr3_KI270935v1_alt 100806 338 + 197351 ATCTCCCCACATTTTCTTTTCTTTt-ttctttttctttctttc-----tttttgttttttgagacgaagtctcgctctgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcct-cccaagtagctgggactacaggcgcccgccaccacgcccaactaatttttatgtttttttttttagtagagacggggtttcaccgtgttagccagaatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtgctgggattacagacatgagccaccgcacccgg s panTro4.chr3_GL389630_random 60975 337 + 103936 ATCTCCCCAAATTTTCTTCTCTTTt-ttctttttctttctttc-----tttttgttttttgagacgaagtctcgctctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcct-cccaagtagctgggactacaggcgcccaccaccacgcccgactaatttttatgtatttttttt-agtagagacggggtttcaccgtgttagccaggatagtctcaatctcctgacctcgtgatccacccgtcttggcctcccaaagtgctgggattacagacatgagccaccgcgtccag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758056 339 + 202140232 CTCTCCCCAAATTTTCTTTTCTTTTCttttttctttctctttc-----tttcttttttttgagacgaagtcttgctctgtcgcccaggctagggtgcagtggcgtgatcttggctcactgcaagctccgcctcctgggttcacgccattctcctgcttcagcct-cccgagtagctgggactacaggcgcctgccaccacgcccggctaatttttatgtttttttttttagtagagacagggtttcaccgtgttagccaggatagtctcgatctcctgacctcgtgatccgcccgtcttggcctcccaaagtgctgggattacaggtgtgagccaccgcgccagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837136 343 + 123690457 CTCTCCCCAAATTTTCTTTTCCTTTCTTTTttctgtttctttctttctttttttttttttgagacaaagtctcgctctgttgcccaggctggagtgcagtggcacaatctcagctcattgcaagctccgcctcccaggttcacgccattctcctgcctcagcct-ccccagtagctgggactacaggcgcccgccaccacacccggctattttttttgtatttttttt-agtagagacggggtttcaccgtgttagccaggatagtctcgatctcctgacctcgtgatctgcccgtcttggcctcccaaagtgctgggattacaggcatgagccaccgcgcccgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 9986 326 + 111706 CTCTCCCCAACTTTtcttttcttct-----------ctctctc-----tttttttttcttgagatgaagtctcgctctgttgcccaggctggagtgcagtggtgtgacctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcccccccgagtagctgggactacaggcgcc-gccaccacgcctggctaatttttttgtattttttt--agtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcctgg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45261 326 + 192460366 CTCTCCCCAACTTTTCttttcttct-----------ctctctc-----tttttttttcttgagatgaagtctcgctctgttgcccaggctggagtgcagtggtgtgacctcgactcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcccccccgagtagctgggactacaggcgcc-gccaccacgcctggctaatttttttgtattttttt--agtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcctgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 41720 328 - 187378091 CTCTCcccaacttttcttttctttt-----------ctctctc-ttttttttttttttttgagacggagtctcgctctgtcgcccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcccgccattctcctgcctcagcctccccgagtagctgggactgaaggcgcc-gccaccacacccggctagtttttttgta--ttttt--agtagagacggggtttcaccgtgttcgccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctgggattacaggtgtgagccaccacgcctgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 392903 325 - 91754291 CTCTCCCCAACTTttcttttcttct-----------ctctctc------ttttttttcttgagatgaagtctcgctctgtcgccgaggctggagtgcagtggtgtgacctcggctcactgcaagctctgcctcccgggttcacgccattttcctgcctcagcctccccgagtagctgggactacaggcgcc-gccaccacgcctggctaatttttttgtattttttt--agtagagatggggtttcaccatgttagccaggatggtctcaatctcctgacctcatgatttgcccatctcggcctcccaaagtgctgggattacaggcgtgagccactgcgcctgg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I e canFam3.chr33 29053984 0 + 31377067 C e calJac3.chr17 909144 0 - 74750902 C a score=13022.000000 s hg38.chr3_KI270935v1_alt 101144 6 + 197351 ccCCCT s panTro4.chr3_GL389630_random 61312 6 + 103936 ccCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758395 6 + 202140232 ccCCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837479 6 + 123690457 ccCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 10312 6 + 111706 GCCCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45587 6 + 192460366 GCCCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42048 6 - 187378091 ggcCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 393228 6 - 91754291 GCCCCT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29053984 6 + 31377067 CTCCCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I e calJac3.chr17 909144 0 - 74750902 C a score=183185.000000 s hg38.chr3_KI270935v1_alt 101150 54 + 197351 CTCCCCAAATTTTCATGTCAT-CTGGGGAAGTGCAGGTCTCCATGGCCTGCAAGG s panTro4.chr3_GL389630_random 61318 54 + 103936 CTCCCCAAATTTTCATGTCAT-CCGGGGAAGCGCAGGTCTCCGTGGCCTGCAAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758401 54 + 202140232 CTCCCCAAATTTTCATGTCAT-CCGGGGAAGAGCAGGTCTCCGTGGCCTGCAAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837485 54 + 123690457 CTCCCCAAATTTTCATGTCAT-CCGGGGAAGAGCAGGTCTCCGTGGCCTGTAAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 10318 54 + 111706 CTCCCCTAATTTTCATGTCAT-CCGGGGAAGGGCAGGTCTCCGTGGCCTGCAAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45593 54 + 192460366 CTCCCCTAATTTTCATGTCAT-CCGGGGAAGGGCAGGTCTCCGTGGCCTGCAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42054 54 - 187378091 CTCCCCAAATTTTCATGTCAT-CCGGGGAAGGGCAGGTCTCCATGGCCTGCAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 393234 54 - 91754291 GTCCCCAAATTTTCATGTCAT-CCAGGGAAGGGCAGGTCTCCGTGGCCTGCAAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909144 54 - 74750902 CTCCCCAAATTTTCATGTCAC-CCAGGGAAGGAAAGGTCTCCTTAGCCTGGAAGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29053990 55 + 31377067 CTCCCAAGATCTGCATATTATACTAGGGAAAGACTGATCTTACTGGTCTGCAAGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65418128 1147 - 98207768 I a score=730904.000000 s hg38.chr3_KI270935v1_alt 101204 251 + 197351 GTCACC----------------------------------------------------------------------------------------------ATGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA-AGAAAATAGGGAGGCTAGGCAGAAAAA--ACCGCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATTTGTA---CAAGTTGGGAAAATTCTCCTAAAACC-----CACTGGATAGAACTTCCAATGG--------------------------------------------TAAAGTTCCGGGGTCAGGG-TTTTGAGGATGGGGATGGTGTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG s panTro4.chr3_GL389630_random 61372 251 + 103936 GTCACC----------------------------------------------------------------------------------------------ATGACTGACAACCCAGTCAGGATCCCATA-GA---GGAAGGATGAGCCCCA-AGAAAATAGGGAGGCCAGGCAGAAAAA--ACCCCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATTTGTA---CAAGTTGGGAAAATTCTCCTAAAACC-----CACTGGACAGAACTTCCAATGG--------------------------------------------TAAAGTTCCGGGGTCAGGG-TTTTGAGGATGGGGATGGTGTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758455 251 + 202140232 GTCACC----------------------------------------------------------------------------------------------AGGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGATGATCTCCA-AGAAAATAGGGAGGCTAGGCAGAAAAA--ACCCCAGAGATGTATACTCTAGATGAGGACCATGATTGGGATGTATTTCTA---CAAGTTGGGAAAATTATCCTAAAACC-----CACTGGACAGAACTTCCAATGG--------------------------------------------TGAAGTTCCGGGGTCAGGG-TTTTGAGGATGGGTATGGTGTGGCTTGTTGG-AGGTTAGACTGGGTCAGCTCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837539 252 + 123690457 GTCACC----------------------------------------------------------------------------------------------ATGACTGACAACCCAATCAGGATCCCACAGGA---GGAAGGATGGGCCCCA-AGAACATAGGGAGGCTGGGCAGAAAAA--TCCCCAGAGATGGGCACTGTAGATGAGGACCATGACTGGGATGTATTTGCA---CAGGCTGGGAAAATTCTCCTAAAACC-----CACTGGACGGAACTTCCGATGG--------------------------------------------TGAAATTCCGGGGTCAGGG-TTTTGGGGATGGGGATGGTGTGGCTTGTTGG-AGGTTAGACTGCGTCAGCTCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 10372 296 + 111706 GCCATC----------------------------------------------------------------------------------------------ACGACTGACTACCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCCA-AGAAAACAGGGAGGCTAGGCAGAAAAA---CCCCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATTTGTA---CAAGTTGGGAAAATTCTCCTGAAGCC-----CACTGGACAGAACTTCCGATGGTGAAATCCCGGGGCCTGGGCTCTCGGGGAAGGGGGTGGTGTGGCTGAAATCCCGGGGCCTGGGCTCTCGGGGATGCGGATGCTGTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45647 252 + 192460366 GCCATC----------------------------------------------------------------------------------------------ACGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGACGAGCCCCG-AGAAAACAGGGAGGCTAGGCAGAAAAA---CCCCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATTTGTA---CAAGTTGGGAAAATTCTCCTGAAGCC-----CACTGGACAGAACTTCCGATGG--------------------------------------------TGAAATCCCAGGGCCTGGGCTCTCGGGGATGCGGATGCTGTGGCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42108 252 - 187378091 GCCATC----------------------------------------------------------------------------------------------ACGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGATGAGCCCAG-AGAAAACAGGGAGGCTAGGCAGAAAAA---CCCCAGAGATGTACACCCTAGATGAGGACCAAGATTGGGAGGCATTTGTA---CAAGTTGGGAAAATTCTCCTGAAGCC-----CACTGGACAGAACTTCCGATGG--------------------------------------------TGAAATCCCGGGGCCGGGGCTCTCGGGGATGCGGATGCTGTGTCCTGTTGGAAGGTTAGGCTGGGTCAGCTCCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 393288 296 - 91754291 GCCACC----------------------------------------------------------------------------------------------ACGACTGACAACCCAATCAGGATCCCATA-GA---GGAAGGATGAGCCCCG-AGAAAACAGGGAGGCTAGGCAGAAAAA---CCCCAGAGATGTACACTCTAGATGAGGACCAAGATTGGGAGGCATTTGTA---CAAGTTGGGAAAATTCTCCTGAAGCC-----CACTGGACAGAACTTCCGATGGTGAAATTCCGGGGCCAGCACTCTCGGGGATGCGGATGGTGTGGCTGAAATCCCGGGACTGGGGCTCTCGGGGATGCGGATGCTGTGGCTTGTTGGAAGGTTAGGCTGGGTCAGCTCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909198 342 - 74750902 GCCACTTATCCTGGTTCTCACCAGGAGGTGTCGCACTGCCTCCCACCCTGTGTCTGCTTCCCACTAAAAGAAGAAAGCAATTAAAAAACAAACCAAAAAACTGACTGACAACCCAATCAGGGTCCCACA-GA---GGAAGGATGAGCCCCA-AGGAAAGCGGGAGGTGAAGCAGAAGAAAAAGCCCATAGATGTACACTCCAGATGGGGACGGAGATTGGGATGGAGTTATA---CAAGTCGGGAAAATTCTCCTAAAACC-----CGCAGGACAGGACTTCCAAGGG--------------------------------------------TGAAATTCT-GGGTCAGGG-CGTC-----TGGGGATGGTGCGGCTTGCTGGAGGGTTAGACCGGGCCAGCTCAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65419275 229 - 98207768 GCCACT----------------------------------------------------------------------------------------------GTGATTTACATCTCAAAACACATCATAAATGG---GAAAAGAC---------ATGAAATAGGGATGCTAGATATAAAAC--CCCTTGGAGAT--ATGCTCCAGGCAAAGAGGAAGATTGTGGTGTCTTTGAATACCAATCTGGAGAAATTCTTTTA----T-----TCCTAGA--------CCATTAG--------------------------------------------TAAAATTCTGGGGTCAAGGCTCT------TGGGGATGCTATGAATGATTGGAAGACTAGACTGGGTCAGTTCAG i mm10.chr16 I 1147 C 0 s canFam3.chr33 29054045 255 + 31377067 GCCACC----------------------------------------------------------------------------------------------ATGACTGACAGCTCAAAATGAACCACGTG-GAATGAGAAGGACAGGCCTCAGAGGCGCTGGGGATGCCAGGCAGAAAAT---ACCCATGGATGCATGTTCTAGATGAGGACCAAGATTGGGACATATTTGTA---TAAGTTGGGAAAATTCCCCTAAGACCCAGATCACAGGACAAAGGTCCCAGGGT--------------------------------------------CCGAAATCCAGGGGCAGAGCTTT------TGGGAATGGTGTGAGTCAGTGGGGGATCAGACTAGCGCAGCTCAG i canFam3.chr33 C 0 I 8 a score=1158263.000000 s hg38.chr3_KI270935v1_alt 101455 464 + 197351 TGCAGATGTCACGGGCCTGGCCTCACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGATGGGAAGTGTCTAAGCTCTGCTCACAGATGTAACC-GTGAAAACAGGCCCAGTGCACAGTCTAATGTGGATTGCCTCTTTGACAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATGGGACAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTTATGCCAGGTGTAGAGTTC-ATAGCCAGGCTGGACAGGTGGAATGATTGCCCTTAG-CAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCGAAAGA s panTro4.chr3_GL389630_random 61623 464 + 103936 TGCAGATGTCACGGGCCTTGCCTCACTGAGGGGTGGGTTGTTCTCCTAATGTGTGGTACAAAGTAGCAGATGGGGCATGATGGGAAGTGTCTAAGCTCTGCTCACAGATGTAACC-GTGAAAACAGGCCCAGTGCATAGTCTAATGTGGATTGCCTCTTTGACAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATGGGACAGTGCCCTTGCTAATACCTGAAGCTTGCATTCAGCACCTCTCACAGTCAATGGGTGCCACACTGCTGAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGACTTATGCCAGGTGTAGAGTTC-ATAGCCAGGCTGGACAGGTGGACTGATTGCCCTTAG-CAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCTTTGTTGCAGGCGAAAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199758706 408 + 202140232 TGCAGATGTCACGGGCCTGGCGTCGCTGAGGGGTAGCTGGTTCTCCTACTGTGTGGTACAAAGTAGCAGATGGGGCATGATGGGAAGTGTCTAAGCTCTGCTCACAGATGTGACC-GTGAAAACAGGCCCAGTGCACAGTCTGATGTGGATTGCCTCTTT--------------------------------------------------------GACAGTGCCCTTGCTAATATCTGAAGCTTGCATTTAGCACCTCTCACAGTCAATGGGTGCTGCACCGCTTAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGC-AGGGTAAACCTGGCAAAAATGCTGGCTGGGGGTCTTATGCCAGGTGTAGAGTTC-ATAGCCAGGCTGGACAGGTGGAATGATTGCCCTTAACCAGAGGGAAGCAAGATATGTCCGTGGAGAGTGGGATCCCTTGTTGCAGGCGAAAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120837791 408 + 123690457 TGCAGATGTCACGGGCCTGGCCTTGCTGAGGGGGCGGTGGTTCTCCTACTGTGCAGTACAAAGTAGCAGATGGGGCATGATGGGAAGTGTCTAAGCTCTGCTCACAGATGTGACC-GTGAAAACAGGCCCAGTGCAGAGTCTAATGTGGGTTGCCTCTTT--------------------------------------------------------GACAGCGCCCTTGCTGATACCTGAAGCTTGCATTTAGCACCTCTCAGAGTCAATGGGTGCCGCACCGCTTAAAAGTGGCTCAGGCTTCCTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTTATGCCAGGTGTAGGGTTC-ACAGCCAGGCTAGACAGGTGGAGTGATTGCCCTTAG-CAGACGGAAGCAAGATATGTCCGTGGAGAGTGGGCTCCTTTGTTGCAGGCGAAAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 10668 409 + 111706 TGCAGATTTCACGGGCCTGGCCTCGCTGAGGGGCGGGTGGTTCTCCTGCTGTGCGGTACACAGTAGCAGATGGGGCATGACGGGAAGTATCTAAGCTCTGCTCACAAACGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTGGATTGCCTCTTT--------------------------------------------------------GGCAGTGCCCTTGTCAGTACCCGAAGCTTGCATTTAGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTCATGCCAGGTGTAGAGTTC-ATAGCCGGGCTGGACAGGTGAAGTGATTGCCCTTTG-CAGAGGGAAGCAAGATACATCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 45899 409 + 192460366 TGCAGATTTCACGGGCCTGGCCTCGCTGAGGGGCGGGTGGTTCTCCTGCTGTGCGGTACACAGTAGCAGATGGGGCATGACGGGAAGTATCTAAGCTCTGCTCACAAACGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTGGATTGCCTCTTT--------------------------------------------------------GGCAGTGCCCTTGTCAGTACCCGAAGCTTGCATTTAGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTCATGCCAGGTGTAGAGTTC-ATAGCCGGGCTGGACAGGTGAAGTGATTGCCCTTTG-CAGAGGGAAGCAAGATACGTCTGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42360 409 - 187378091 TGCAGATTTCATAGGCCTGCCCTCGCTGAGGGGCGGGTGGTTCTCCTGCTGTGCAGTACACAGTAGCAGATGGGGCATGACGGGAAGTATCTAAGCTCTGCTCACAAACGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTGGATTGCCTCTTT--------------------------------------------------------GGCAGTGCCCTTGTCAGTACCCGAAGCTTGCATTTAGCACCTCTCACAGTCAATGGGGGCCGTACCACTTAAAAGTGGCTCAGGCTTATTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTTATGCCAGGTGTAGAGTTC-ATAGCCGGGCTGGACAGGTGAAGTGATTGCCCTTTG-CAGAGGGAAGCAACATACGTCCGTGGAGAATGGGATCCTTTGTTGCAGGCGAAAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 393584 409 - 91754291 TGCAGATTTCATGGGCCTGGCCTCGCTGAGGGGAGGATGGTTCTCCTGCTGTGCGGTGCAAAGTAGCAGGTGGGGCATGACGGGAAGTATCTAAGCTCTGCTCACAAACGTGACCAGTGAAAACAGGCCCGGTACACAGTCTAACGTGGATTGCCTCTTT--------------------------------------------------------GGCAGTGCCCTTGTCAGTACCCGAAGCTTGCATTTAGCACCTCTCACAGTCAATAGGTACCGTACCACTTAAAAGTGGCTCAGACTTATTGTCATCCCTTGCAAGGGTAAACCTGGCAGAGATGCTGGCTGGGGGTCTTATGCCAGGTGTAGAGTTC-ATAGCCGGGCTGGACAGGTGAAGTGATTGCCCTTTG-CAGAGGGAAGCAAGATACGTCCGTGGAGAGTGGGATCCTTCGTTGCAGGTGAAAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909540 389 - 74750902 TGCAGATTTCACTGA---GGCCTCTCTGAGGCATGGATGGTTCTCCCACTGTGCGGTACAAAGCAGCAGAGGGAGCATG--------------AGCTCTGCTCACAGATGTGACCACGGAAAACAGGCCCAGTATAGAGCCTAACGTGG-TGGCCTCTTT--------------------------------------------------------GACGGTGCCCTTG-CAGTACCCAGAGCTTGCGTTTAGCACCTCTCACAGTCCATGGGTGCTACAGTGCTTATCAGTGGCTCAGGCTTACTGTCATCCCTTGCAAGGGTAATCCTGGCAGAGATATTGTGGGGGGGTCTTATGCCAGGTGCAGAATTC-ATAGCCAGGCTGGACA-GTGAAATGATTGCCCTTAG-CAGACAGAAGCAAGATATGTCCGTTGAGAGTGGGACCCATTGTTGCAGGCAAAGGA i calJac3.chr17 C 0 C 0 s mm10.chr16 65419504 334 - 98207768 TATAAATGTCACAGGCCTAGC-TCAGTGCTGG---------TCTCGTG--------------------------------------------AACCTGTACT-------GTGAACAGTGAGGCTAGACCTGGTGCACCACCTAAGAT-AATGgcttctcc---------------------------------------------------------accctactctggcaaatgtctcagactt-cagccagcaccttccatagtcagtgagagtcacat----------tagttcatgctccatgccACCTAGTAAAGGAATAGACCCTGACGAGGGGCAGACCAGCAG-CTTCTGTTAGGGGTACAGTCCTGCTGCCAGAATAGACAGGTGAGGTGGTTGCCCTTA--CAGAGCGGAAGTTGCTGTTATCCCTGCCAGAAGGATCCCTCGGTGAATGCAAAAGA i mm10.chr16 C 0 I 440 e canFam3.chr33 29054300 8 + 31377067 I a score=213100.000000 s hg38.chr3_KI270935v1_alt 101919 74 + 197351 AAACC-----TCTGTCTGTCGTAAGTAAAAGGGGGATTTGTT-GGCAGCGTCCCAGAGTGCATAG-AATCAAAGCAATGCC s panTro4.chr3_GL389630_random 62087 74 + 103936 AAACC-----TCTGTCTGTCGTAAGTAAAAGGGCGATTTGTT-GGCAGTGTCCCAGAGTGCATAG-AATCAAAGCAATGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199759114 81 + 202140232 AAACCCTCTGTCTGTCTGTCGTAAATTAAAATGGGAATTGTTGGGCAGCGTCCCCGAATGCATAGAAATCAAAGCAATGCC i ponAbe2.chr3 C 0 M 20226 s nomLeu3.chr11 120838199 74 + 123690457 AAACC-----TCTGTCTGTCATAAGTAAAAGGGGGATTTGCT-GGCAGCGTCCCAGAGTGCATAG-AATCAAAGCAATGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11077 73 + 111706 AAACC-----TCTGTCTGTCATAAGTAAAAGGGGGATTTGTT-GGCAG-GTCCCAGAGTGCATAG-AATCAAAGCAATGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46308 73 + 192460366 AAACC-----TCTGTCTGTCATAAGTAAAAGGGGGATTTGTT-GGCAG-GTCCCAGAGTGCATAG-AATCAAAGCAATGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42769 73 - 187378091 AAACC-----TCTGTCTGTCATAAGTAAAAGGGGGATTTGTT-GGCAG-GTCCCAGAGTGTATAG-AATCAAAGCAATGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 393993 73 - 91754291 AAACC-----TCTGTCTGTCATAAGTAAAAGGGGGATTTGTT-GGCAG-GTCCCAGAGTGCATAG-AATCAAAGCAATGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 909929 72 - 74750902 AGACC-----TCTGTCTGTCATGAGTAAAAGGGGGATTTGTT-GGCAGGGTCT--GAGTGCATAG-AATCAAAGGAATGCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65420278 64 - 98207768 AAAGC-----TCTTTGCTTTGCAAACAAGGGGA----------GAGAGAACCCCAGA-TGCACAG-AAGCAAAGGAATGGC i mm10.chr16 I 440 C 0 e canFam3.chr33 29054300 8 + 31377067 I a score=221848.000000 s hg38.chr3_KI270935v1_alt 101993 96 + 197351 AGGACAGCAGGCTTGGAAAATAGGCAGGAGGGCCCCCA----------GGAGCTCTGAGGTCCAGACAGTGGGATCAGGCTGGCTGGGACACTGTCCCTCTTGCTG s panTro4.chr3_GL389630_random 62161 96 + 103936 AGGACAGCAGGCTTGGAAAATAGGCAGGAGGGCCCCCA----------GGAGCTCTGGGGGCCAGACGGTGGGATCAGGCTGGCTGGGACACTGTCCCTCTTGCTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120838273 96 + 123690457 AGGAGAGCAGGCTTGGAAAATAGGCAGGAGGGCCCCCA----------GGGGCTCTGGGGGCCAGACAATGGGATCACGCTGGCTGGGACACTGTCCCTCTTGCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11150 106 + 111706 AGGACAGCAGGCTCGGAACATAGGCAGGAGGACCCCCAGGGGAGTGCGGGGGCTCTGGGGGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTCCCTCTTGCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46381 106 + 192460366 AGGACAGCAGGCTCGGAACATAGGCAGGAGGACCCCCAGGGGAGTGCGGGGGCTCTGGGGGCCAGACAGTGGGACCACGCTGGCTGGGACACGGTCCCTCTTGCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42842 106 - 187378091 AGGACAGCAGGCTTGGAACATAGGCAGGAGGACCCCCAGGGGAGTGCGGGGGCTCTGGGGGCCAGACAGTGGGACCACGCTGTCTGGGACACGGTCCCTCTTGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394066 105 - 91754291 AGGACAGCAGGCTCGGAACATAGGCAGGAGGACCCCCAGGGGAGTGCGGGGGCTCT-GGGGCCAGACAGTGGGGTCACGCTGGCTGGGACACGGTCCCTCTTGCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 910001 95 - 74750902 AGGACAGCAGGCTTGGGACATAGGCAGGAGAACCCCCA----------GGGGCTCT-GGGGCCAGACAGCGGGAACACGCTGGCTGGGACACGGTCACTCTTGCTG i calJac3.chr17 C 0 I 800 s mm10.chr16 65420342 58 - 98207768 AGAAGAGCAGCTTTG----ACAAGCATAAAGA-------------------------------------------CATGCTTCCTAGGACACTGTC-CTCTTGCCG i mm10.chr16 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=381665.000000 s hg38.chr3_KI270935v1_alt 102089 163 + 197351 GTCAGTCACTATTGGATGCTGCCACAGCCAAGGGGCATCACGTGGCCTGCACACACA--TTCACA--TAGGTTCTCGctgcctttttgtctcactggactttttgctccagagccaaagtcctgagtaggaacatttgataggctgagcttagcccttgtactccca s panTro4.chr3_GL389630_random 62257 163 + 103936 GTCAGTCACTATTGGATGCTGCCACAGCCAAGGGGCATCACGCGGCCTGCACACACA--TTCACA--TAGGTTCTCGctgcctttttgtctcactggactttttgctccagagccaaagtcctgagtaggaacatttgataggccgagcttagcccttgtactccca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120838369 163 + 123690457 GTCAGTCACTATTGGATGCCGTCACAGCCAACGGGCATCACGCAGCCTGCGCACACG--TTCACA--CAGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAGGAACATTCGATAGGCCGAGCTTAGCCCTTATACTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11256 163 + 111706 GTGAGTCACTACTGGACGCTGCCACAGCCGACGGGCGTCATGCGGCCTGCGCACACG--TTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTgctccagagccaaagtcctgagtaggaacatctgataggcagagcttagcccttgtgctcccg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46487 163 + 192460366 GTGAGTCACTACTGGACGCTGCCACAGCCGACGGGCGTCATGCGGCCTGCGCACACG--TTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAGGAACATTTGATAGGCCGAGCTTAGCCCTTGTGCTCCCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 42948 163 - 187378091 GTGAGTCACTAGTGGACGCTGCCACAGCCGACGGACGTCATGCGGCCTGCGCACACG--TTCACA--CGGGTTCTCGCTGCCTTTTTGTCTCGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAGGAACATTTGATAGGCCGAGCTTAGCCCTTGTGCTCCCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394171 163 - 91754291 GTGAGTCACTACTGGACGCTGCCACAGCCGACGGCCGTCATGCGGCCTGCGCACACG--TTCACA--CGGGTTCTCGCTGCCTTTTTGTCTTGCTGGACTTTTTGCTCCAGAGCCAAAGTCCTGAGTAGGAACATTTGATAGGCCGAGCTTAGCCCTTGTGCTCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 910896 159 - 74750902 GTCAGTCACTATTGGATGCTGCCACAGCTGACGGGCATCATGCTGCCCATGCACACGATTTCACA--TGGGTTCTTGCTGCCTTTTTGTCTCG--GGGTCACCTG--TCAGAGCC--AGTCCTGAGTGGGAATATTCGATAGGCTGAGCTTAGCTCTTGTGCTCCCA i calJac3.chr17 I 800 C 0 s mm10.chr16 65420400 141 - 98207768 ------------TG--------CACTGTCCGTGGATGTCGTGCTTCCTCCATGTGCC--GTCACAAGTGGGTTCCCACTGGGACATCGTCTT--TGGGCTGCTGGTTGCAGGGCCAAAGCTCTGAGCAGGAGCGTCCAATCAGCCATGTTTGGCTCTTGTACCAC-- i mm10.chr16 C 0 C 0 e canFam3.chr33 29054300 8 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=509179.000000 s hg38.chr3_KI270935v1_alt 102252 214 + 197351 tgagcccacagccaggtgccaggggacgggaagaagggatg-----tctgtgtccttggagttctcttagcagcagtgaggccaatcgtgactcccactgt----gaggagttccctaaacatggcacggggg-ctcgacacccgatggccaaataagtgacaaatgcccCCGGCATGTGATAATCAAAGTAGCGAGTGTGAATCCTTGTGGGAGAGGGAAGCC s panTro4.chr3_GL389630_random 62420 214 + 103936 tgagcccccagccaggtgccaggggacgggaagaagggatg-----tctgcgtccttggagttctctcagcagcagcgaggccgatcgtgactcccgctgt----aaggagttccctaaacatggcacggggg-ctcgacacccgacggccaaataagtgacaaatgcccCCGGCACGTGATAATCAAAGTAGCGAGTGTGAATCCTTGTGGGAAAGGGAAGCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120838532 213 + 123690457 TGAGCCCACAGCCAGGTGCCAGGGGATGGGAAGAAGGGATA-----TCTGTGTCCTTGGAGTTCTCTTAGCAGCAGCGAGGCCCATcgtgactcccactgt----aaggagttccctaaacatggcacggggg-tttgacacccgatggccaaataaatgacaaatg-cccCGGCACGTGATAAGCAAAGCAGCGAGTGTGAATCCTTGTGGGAGGGGGAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11419 214 + 111706 tgagtccacagccaggtgccaggggatgggaagaagggata-----tctgcatccttggagttctcttagtggcagcgaggcccatcaagactcctaccgc----aaggagttccctaaacatagcacggaga-ttcgacccccgatggccaaataaatgacaaatgCTCCCGGCACATGACAATCAAAGTAGCGAGTGTGAATCCTTGTGGAAGAGGGAAGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46650 214 + 192460366 TGAGTCCACAGCCAGGTGCCAGGGGATGGGAAGAAGGGATA-----TCTGCATCCTTGGAGTTCTCTTAGTGGCAGCGAGGCCCATCAAGACTCCTACCGC----AAGGAGTTCCCTAAACATAGCACGGAGA-TTCGACCCCCAATGGCCAAATAAATGACAAATGCCCCTGGCACGTGACAATCAAAGTAGCGAGTGTGAATCCTTGTGGAAGAGGGAAGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 43111 209 - 187378091 TGAGTCCACAGCCAGGTGCCAGGGGATGGGAAGAAGGGATA-----TCTGCATCCTTGGAGTTCTCTTAGTGACAGCGAGGCCCATCAAGACTCC-----C----AAGGAGTTCCCTAAACATAGCAAGGAGA-TTCGACCCCCGATGGCCAAACAAATGACAAATGCCCCCGGCACGTGACAATCAAAGTAGCGATTGTGAATCCTTGTGGAAGAGGGAAGcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394334 211 - 91754291 TGAGTCCACAGC---GTGCCAGGGGATGGGAAGAAGGGATA-----TCTGCATCCTTGGAGTTCTCTTAGTGGCAGCGAGGCCCATCAAGACTCCCACCGC----AAGGAGTTCCCTAAACATAGCACGGAGA-TTCGACCCCCGATGGCCAAATAAAGGACAAATGCCCCTGGCACGTGACAATCAAAGTAGCGAGTGTGAGTCCTTGTGGAAGAGGGAAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911055 198 - 74750902 T-AGTGCACACCCAGTTGCCAGGGGCTGGGAAGAGGGGATA-----TGGGCATCCCTGACGTTCTCTCCGTGGCAGCGAGGCCCATCATAACTCCCACTGTCATGGAGGAGCTCCCTGAACATGGCATGGGGG-TTTGATGCCAGGTGG-------------------CCTCGGCACACAGTAACCAAAGGAGCACGTGTGGACCCCTGTTGAAGAGGGAGGCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65420541 188 - 98207768 ----------------TACCCAGGGATATTAAGAGGGAATAAATATTCTGGCTTTCCAGA-CTCTCTGGTAACAAGGGAGGCTCAC--TGACCTTCTTCCT----GAGGATTCCTGTCCATAGAGCATCAACG-TTTGAT--------GTAGGACAGATGGCAGGTG--TCTGTCACA--AACATCAAAGTGGCGAGTGCAAATCCTCATGGGAGAGAGAAGCC i mm10.chr16 C 0 I 26 s canFam3.chr33 29054308 213 + 31377067 TGTGGCCACATCTTGCTGCCAGGGGATGAGAAGGGGGAATA-----ACCGGGCCCTTGAAGTTCTCTTAGTGGAAA-GGGGCCCGTCGGGACTCCCATAGT----AAGAAGCGCCCTGAACGCCGCATGGCGGCTTTGAAAGTGGACAG-CAGAGACATGACCAATGCCTACCGCGCATGATAATCAAAATGGGAAGTGTGAACCCTCGCCAAGGAGGGAGGCC i canFam3.chr33 I 8 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=2300.000000 s hg38.chr3_KI270935v1_alt 102466 1 + 197351 A s panTro4.chr3_GL389630_random 62634 1 + 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120838745 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11633 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46864 1 + 192460366 A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 43320 1 - 187378091 a i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394545 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911253 1 - 74750902 G i calJac3.chr17 C 0 I 1 s canFam3.chr33 29054521 1 + 31377067 A i canFam3.chr33 C 0 I 254 e mm10.chr16 65420729 26 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=572251.000000 s hg38.chr3_KI270935v1_alt 102467 384 + 197351 ATTGCttttgttttgttttgttttgttttgttttgttttgttttgttttctgagactgagtctcactctgtcatccaagctggagtgcagtggtgcgatcttggctcaccacaacctccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcaccaccatacctggctaatttttgtatttttagtagagatggagtttcaggtttcagcatcttggccaggctagtcttgaactcttgacctcatgatccacccacctcagcctcccaaagtgctgggattacaggcgttgagtcattgcgtccggcTGGGAAGCCAGttttctttttctttttctttt----------------tctttctctttttc s panTro4.chr3_GL389630_random 62635 370 + 103936 GTTGC----------ttttgttttgttttgttttgttttgttttgttttctgagactgagtctcactctgtcgcccaagctggagtgcagtggtgcgatcttggctcaccacaacctccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcaccaccatacctggctaatttttgtatttttagtagagatggagtttcaggtttcagcatcttggccaggctagtcttgaactcttgacctcgtgatccacccacctcagcctcccaaagtgctgggattataggcgttgagtcattgcgcccggcTGGGAAGCCAGT----tttttctttttctttt----------------tctttctctttttc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120838746 350 + 123690457 Gttgt--------------------ttttgttttgttttcttttcttttctgagactgagtctcgctctgtcgcccagcctggagtgcaatggtgcgatcttggctcactgcaacctccgcctcccaggttcaagccattctcctgcctcaaccttctgagtagctgggattacaggcccgcaccaccatacccggctaatttttgtatttttaggagagatggagtttcaggtttcaccatgttggtcaggctagtcttgagctcttgaccttgtgatccacccgcctcggcctcccaaagtgccgggattataggca-tgagtcattgcgcctggcTGGGAAGCCAGt-------------tttgttt----------------tctttttctttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 11634 369 + 111706 GTTG----------------------tttgttttgttttgttttgttttctgagagtgtgtctcgctctgtcg-ccaggctggagtgtagtggtgagatctcggctcactgcaacctccacctcccaggttcaagacattctcctgcctctgcctcccgagtagctgggattacaagcccgcgccagcaaacc-ggctaatttttacatgtttagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatccactcacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctggcTGGAAAGCCAGTtttgtttttttctttttccc------tttctctctttctctttctttctc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 46865 371 + 192460366 Gttgt----------ttatgttttgttttgttttgttttgttttgttttCtgagactgtgtctcgctctgtcg-ccaggctggagtgtagtggtgagatctcggctcactgcaacctccacctcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaagcccgcgccagcaaacc-ggctaatttttacatgtttagtagagacagggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatccactcacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcctggcTGGAAAGCCAGTTTTGTTTTtttctttttctc----------------tctctctctttctc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 43321 360 - 187378091 gttg----------------------tttgttttgttttgttttgttttctgagactgtgtctcgctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaacctccacctcccaggttcaagacattctcctgcctccgcctcccgagtaggtgggattacaagcccGCGCCAGCaaacc-ggctaatttttacatgtttagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttgtgatccacccacctcagcctcccaaagtgctgggattacaggca-tgagtcattgcgcCTGGCTGGAaagccagttttgtttttttctttttctt----------------tttgtctttctctc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394546 378 - 91754291 Gttgt----------t----------tatgttttgttttgttttgttttctgagactgtgtctcactctgttgcccaggctggagtatagtggtgcgatctcggctcactgcaacttccacctcccaggttcaagacattctcctgcctccgcctcccgagtagctgggattacaaacctgcgccagcaaacc-agctaatttttatatgtttagtagagacggggtttcaggtttcaccatcttggccaggctagtctcgaactcttgaccttctgatccacccacctcagcctcccaaagtgctgggattacaggcg-tgagtcattgcgcctggcTGGAAAGCCAGTTTTGTTTTtttctttttctctttctctttctctctttctctttctttctc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65420729 26 - 98207768 I e canFam3.chr33 29054522 254 + 31377067 I e calJac3.chr17 911254 1 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=702568.000000 s hg38.chr3_KI270935v1_alt 102851 325 + 197351 ttttcttttcttttattttt---cttgagacagattctcgctctgtcgtccag-----gctggagtgcaatggcacgatctcggctcactgcaacctccacctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacactaccactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgacccacctgcctctgcttcccaaagcactgggattattggcgtgagccaccgcacccggccGGGAAGCCAGTTTTGAATCT s panTro4.chr3_GL389630_random 63005 325 + 103936 ttttcttttcttttattttt---cttgagacggattctctctctgtcgtccag-----gctggagtgcaatggcatgatctcggctcactgcaacctccgcctcccggattcaagcaattctcctgcctcaacctccctagtagctgggattacaggtgcacactaccactcctggctaatttttgtatttttagtagagatggggtttctccatgttggtcaggctggtctcgaactcctgacctcaggtgacccacctgcctctgcttcccaaagcactgggattattggcgtgagccaccgcacccagccGGGAAGCCAGTTTTGAATCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120839096 320 + 123690457 ttttcttttc-----ttttt---cttgagacagattctcgctctgtcatccag-----gctggagtgcaatggcgcaatcttggctcactgcaacctctgcctcccagattcaagcgattctcctgcctcaacctccctagtagctgggattacaggcgcccaccaccactcctggctaatttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaacacctgacctaaggtgacccacccacctctgtttcccaaagcactgggattattggtgtgagccactgcacccggcTGGGAAGCCAGTTTTGAATCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 12003 330 + 111706 tttctctttctcttcttttt---cctgagacagattctcactctgttgtccagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccgcctccctggttcaagcaattctcctgcctcagtctcctgagtacctgggactacaggtgcccaccaccactcccggctaatttttgtattattagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaaatgacccacccacctcagcttcccaaagcactgggattattggcgtgagccaccgcatctagccAGGAAGCCAGTTTTGAGTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 47236 330 + 192460366 tttctctttctcttcttttt---cctgagacagattctcactctgttgttcagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccgcctcccaggttcaagcaattctcctgcctcagtctcctgagtacctgggactacaggtgcccgccaccactcccggctgatttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcaaatgacccacccgcctcagcttcccaaagcactgggattattggcgtgagccaccgcatctagccAGGAAGCCAGTTTTGAGTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 43681 330 - 187378091 tttctctttctcttcttttt---cttgagacagattctcactctgttgtccagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagtctcctgagtacctgggattacaggtgcccgccaccactcccggctgatttttgtatttttagtagagacggggtttctccatgttggtcaggttggtcttgaactcctgacatcagatgacccacccgcctcagcttcccaaagcactgggattattggcgtgagccaccgcatcaaGCCAGGAAGCTAGTTTTGAATCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 394924 330 - 91754291 tttctctttctcttcttttt---cctgagacagattctcgctctgttgtccagagtgcaatggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagtctcccgagtagctgggattacaggtgcccaccagcacacccggctgatttttgtgtttttagtagagacggggtttctccatgttgatcaggttggtcttgaactcctgacatcaggtgacccatccacctcagcttcccaaagcactgggattattggcgtgagccaccgcacctagccAGGAAGCCAGTTTTGAATCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911255 326 - 74750902 ttttctttccttttatttattgctttgagacag--tctcgctctgtcgtccgg-----gctgaagtgcgatgctgtgatcttggctcactgcaacctccgtctcccgggttcaagtgattgtcctgccttggcctcctgagtagctgggattggaggtgcccaccaccacacctggctaatttttgtatttttagtagagacagggccttgccatgttggccaggctggtcttgaactcctgacttcaggaaatccacctgcctcggcttcccaaagtgatgggattatgggtgtgagcccccgtgcccagccAGGAAGCCAGGTTTGAATGT i calJac3.chr17 I 1 C 0 e mm10.chr16 65420729 26 - 98207768 I e canFam3.chr33 29054522 254 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=31454.000000 s hg38.chr3_KI270935v1_alt 103176 16 + 197351 CAGGTCTAAGCCCCCA- s panTro4.chr3_GL389630_random 63330 16 + 103936 CAGGTCTAAGCCCCTA- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120839416 16 + 123690457 CAGGTCTAAGCCCCCA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 12333 16 + 111706 CAGGTCTGCGCTCCCA- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 47566 16 + 192460366 CAGGTCTGCGCTCCCA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 44011 16 - 187378091 CAGGTCTGCGCTCCCA- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 395254 16 - 91754291 CAGGTCTGCGCTCCTA- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911581 15 - 74750902 CAGGTCTGAACCCCC-- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29054776 17 + 31377067 CAGATGCGAGCCCCCTA i canFam3.chr33 I 254 C 0 e mm10.chr16 65420729 26 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=247961.000000 s hg38.chr3_KI270935v1_alt 103192 91 + 197351 AACCAGAAATGATTTCAGGAATCGGAAAGAAACCG-CGAGATCAGGAGCAGGTCAAGCAGCTGAGGCGCAGGCACCAGGCCACATGG-GGTTG s panTro4.chr3_GL389630_random 63346 91 + 103936 CACCAGAAATGATTTCAGGAATCGGAAAGAAACCG-GGAGATCAGGAGCAGGTCAGGCAGCTGAGGCACAGGCACCAGGCCACGTGG-GGTTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120839432 91 + 123690457 AACCAGAAATGATTTCAGGAATCGGAAAGAAACTG-GGAGATCAGGAGCAGGTCAAGCAGCTGAGGCGCAGGCACCAGGCCATGTGG-GGTTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 12349 91 + 111706 AACCGGAAATGATTTCAGGAATCGGAAAGAAACTG-GGTGATCGGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 47582 91 + 192460366 AACCGGAAACGATTTCAGGAATCGGAAAGAAACTG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 44027 91 - 187378091 AACCGGAAATGTTTTCAGGAATCGGAAAGAAACTG-GGTGATCAGGAGCAGGTCGGGCAGCGGAGGCGCGGGCACCAGGCCCTGTAG-GGTTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 395270 91 - 91754291 AACCGGAAATGATTTCAGGAATCGGAAAGAAACTG-GGTGATCAGGAGCAGGTCGGGCAGCTGAGGCGCAGGCACCAGGCCCTGTAG-GGTTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911596 78 - 74750902 -----GAAATGATTTCAGGAATCGGAAAGACACC----------GGAACAGGCCCGGTAGCTGAGGCGCAGGCACCAGGCCATGTGGAGGTTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65420755 92 - 98207768 AACTAGCAGATGTTTCAGAGGTCAGAGAGCAACCGTGGAGTTCAGGATCAGGTCAGGCAGCTGAGGTCTAGGAGTGAGGCCACATGG-GATTG i mm10.chr16 I 26 I 279 s canFam3.chr33 29054793 86 + 31377067 AACTGGAAACCATTTCAGGAGTCAGAAAGGGGCCA-GGGAGGAGGAAGCAGGTCAGG-AGCTGAAGTGCAAGCACCATGC----GGG-TGCTG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=86066.000000 s hg38.chr3_KI270935v1_alt 103283 40 + 197351 GGCATCAGTTCTC--GTCCGGGGACAGCCCAACAG--TTTGGGC s panTro4.chr3_GL389630_random 63437 40 + 103936 GGCATCAGTTCTC--GTCCGGGGACAGCCCAACAG--TTTGGGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120839523 42 + 123690457 GGTGTCAGTTCTCGTGTCCGGGGACAGCCCAACAG--TTTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 12440 39 + 111706 GGCGTCAGTTCTC--GTCCGGGGACAGCCC-ACGG--TTTGGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 47673 39 + 192460366 GGCGTCAGTTCTC--GTCCGGGGACAGCCC-ACGG--TTTGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 44118 39 - 187378091 GGCGTCAGTTCTT--GTCCGGGGACAGCCC-ACGG--TTTGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 395361 38 - 91754291 GGCGTCAGTTCTC--GTCCGGGAACAG-AC-ACGG--TTTGGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911674 39 - 74750902 GGTGTCAGTTCTT--GTCTGGGGACAGCTg-acag--tttgggc i calJac3.chr17 C 0 C 0 s canFam3.chr33 29054879 40 + 31377067 GGTGTGAGTTCTC--GT-TGGGAGTAGGAC-ACAGACCCAGGGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65420847 279 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=2353067.000000 s hg38.chr3_KI270935v1_alt 103323 875 + 197351 TCGGGGATTagacaatgagcttaggaaccagctagatctgggtgtgaattctagttcccaactgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcctaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcaccagcctgtgtccagcatgtaggaggcCCAGGAAGGGTTGCCGTCCTCCGCATGCACTCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGCGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCTTTTGCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAG-G--GTGCTGCCCCTAGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGGTTCCCATGAAGGGCAGCATGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCACATCCACCGGAGTGTATGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCTGTGTGCTTCCATCCTGCATTAAAATTC-ACTCAGTGTGGCC-CAGAGGCTGTCTA-TTGA---TCTGCATG-----------------CTTTCGCCATTTTTATAGTACAGGGATT--GTGTATAGTCTCACTGCTACCTCC-TCCTTCTACTCCCCCAGGTCTTGGTTTGGACTTTGATGATAGCATTTACTGAGACGGG-CCTGGAGCCTGTCGAAC s panTro4.chr3_GL389630_random 63477 874 + 103936 TCAGGGATTagacaatgagcttaggaaccagctagatctgggtgtgaattctagttcccaactgtgtgatcttggataagttattctatgcgactttcatcccttataaaatgaggatcgtaacacctgctttataaggttgctgtgaggtttagatgacataatgtgtgtgaggcaccagcctgtgtccagcatgtaggagg-cCAGGAAGGGTTGCCGTCCTCCGCATGCACTCTGCCCCAGTGTCCCTTCCT-GTCCTCTGCCTCTGGCGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCTCTTGCTCTCCAGCTCCACCGGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGTGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCCGTATGCCAAAAGAG-G--GTGCTGCCCCTAGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACTGTGCTGAGAGGTACCCAGAAGTTTCCCATGAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTTGCTCACATCCACCGGAGTGTATGTGT---GGGAA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCTGTGTGCTTCCATCCTGCATTAAAATTC-ATTCAGTGTGGCC-CAGAGGCTGTCTA-TTGA---TCTGCATG-----------------CTTTCGCCATTTTTATAGTACAGGGATT--GTGTGTAGTCTCACTGCTACCTCC-TCCTTCTACTCCCCCAGGTCTTGGTTTGGACTTTGATGATAGCATTTACTGAGACGGG-CCTGGAGcctgttgaac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120839565 867 + 123690457 TCAGGGATTagacaatgagcttcggaaccagctggatctgggtgtgaattctagttcccaactgtgtgatcttcgataagttattccacgcgactttcatcccttataaaatgaggatcgtaacacctgctttacaaggttgctgtgaggtctagatgacataatgtgtgtgaggcaccagcctgtgtcgggcatgtaggaggcCCAGGAAGGGTTGCCGTCCTCCGCATGCACTCTGTCCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCATGGGCCAGAT--GGGCTGAAAGGA-CAGCTGGCTCCCTTGCTCTCCAGCTCCGCCGGGAACTCCATGCCCACGTGCCTCGCCTCCAGGTCTCCTTACTGCGCGTCAGGAGAGGCTAACGGACATCAGCTGCAGCCAGGCATGTCCTGTACACCAAAAGAG-G--GTGCTGCCCC-GGCCTGGG-CCC-----CCACCGACAGACTGCAGCTGCGTTACGGTGCTGAGAGGTACAC--AAGGTTCCCAGGAAGGGCAGCAGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGACCCTCGCTCCCGTCCACCAGAGTATATGTGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATATTCTGTGTTTCAGTAAAGAGAGACCTGCTCAC------CCATCTGTGTGCTTCCGTCCTGCATTAAAATTC-ACTCGGTGTGGCC-CAGAGG----CTA-CTGA---TCTGCATG-----------------CTTTCGCCATTTTTACAGTACAGGGA-T--GTGTATAGTCTCACTGCTACCTCC-TCCTCCTACTCCCCCAGGTCTTGGTTAGGACTTTGATGATAGCATTTACTGGGATGGG-CCTGGAGcctgttgaac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 12479 872 + 111706 TCAggaattagacaatgagcgtcggaaccagctagatctgggtgtgaattctagttcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttataaggtttctgtgaggtttagatgacataatgtgtgtgaagcaccagcctgtgtccggcatgtaaggggtccaggaagggttgccgtccatcaCATGCACTCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTTGTTCTCCAGCTCCGCCAGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCTGTATGCCAAAAGAA-G--GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGATGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCTGTGAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCGCTCACGGCCACCGGAGCATATATGC---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCTGTGTGCTTCCATCCTGCATGAAAATTC-ACTCAGCGTGGTC-CAGAGGTTGTCTG-TTGA---TCTGTATG-----------------CTTTCGCCGTTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-ACCTcc-tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cctggagcctgttgaac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 47712 872 + 192460366 TCAggaattagacaatgagcttcggaaccagctagatctgggtgtgaattctagttcccaactgtgtggtcttggataagttattctatgcgactttgatcccttataaaatgaggatcataacacctgctttaaaaggtttctgtgaggtttagatgacataatgtgtgtgaagcaccagcctgtgtccagcatgtaaggggtccaggaagggttgctGTCCATCACATGCACTCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTTGTTCTCCAGCTCCGCCAGGAACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCTGTATGCCGAAAGAA-G--GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCTGTGAAGGGCAGCCGGTCCAAGCCCCTGACCCCAGATGTGGCAACAGGA-CCTCGCTCACGGCCACCGGAGCATATATGT---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCTGTGTGCTTCCATCCTGCATTAAAATTC-ACTCAGCGTGGTC-CAGAGGTTGTCTA-TTGA---TCTGTATG-----------------CTTTCGCCGTTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-Acctcc-tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cctggagcctgttgaac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 44157 872 - 187378091 TCAGGAATTAGACAATGAGCTTCGGAACCAGCTAGATCTGGGTGTGAATTCTAGTTCCCAACTGTGTGGTCTTGGATAAGTTATTCTATGCGACTTTGATCCCTTATAAAATGAGGATCATAACACCTGCTTTAGAAGGTTTCTGTGAGGTTTAGATGACATAATGTGTGTGAAGCACCAGCCTGTGTCCAGCATGTAAGGGGCCCAGGAAGGGTTACCGTCCTCCACATGCACTCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTATGGCGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTTGTTCTCCAGCTCCGCCAGGGACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTACTGCGCATCAGGAGAGGCTAACAGACATCAGCTGCAGCCAGGCCTGTCCCGTACGCCAAAAGAA-G--GTGCTGCCCATGGCCTGGG-CCC-----CCACCAACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCAAGAAGTTTCCCGTGAAGGGCAGCCGGTCCAAGCCCCTGACCCTAGATGTGGCAACAGGA-CCTCGCTCACGGCCACCGGAGCGTATATGC---GGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACGTGTTC--TGTTTCAGTAAAGAGAGACCTTATCAG------CCATCTGTGTGCTTCCATCCTGCATTAAAATTC-ATTCAGCATGGTC-CAGAGGTTGTCTA-TTGA---TCTGTATG-----------------CTTTCGCCGTTTTTACGGTAGAGGGATT--GTGAATATTCTCACTGC-ACCTCC-TCCTTCCACTCCCCCAGGTCTTGGTTTGCACTTTGATGATAGCATTTACTGAGACGGG-CCTGGAGCCTGTTGAAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 395399 872 - 91754291 TCAggaattagacaatgagcttcggaaccagctagatctgggcgtgaattctagtccccaactgtgtggtcttggataagttattctctgcgactttgatcccttataaaatgaggatcgtaacacctgctttataaggtttctgtgaggtttagatgacatcatgtgtgtgaagcaccagcctgtgtccagcacgtaagGGGCCCAGGAAGGGTTGCCGTCCTCCACATGCGCTCTGCCCCACTGTCCCTTCCT-GTCCTCTGCCTACGGTGAGCTCATGGGTCAGAG--GGGCTGAAAGGACCACCTGGCTCCCTTGTTCTCCAGCTCCGCCAGGGACTCCACGCCCACGCGCCTCACTTCCAGGTCTCCTTGCTGCGCGTCAGGAGAGGCTAACAGACATCGGCTGCAGCCAGGCCTGTCCCGTACGCCAAAAGAA-G--GTGCTGCCCATGGCCTGGG-CCC-----CCACCCACAGACTGCAGCTGCATTACTGTGCTGAGAGGTACCCAGAAGTTTCCTGTGAAGGGCAGCCGGTCCAAGCCCCTGACCCTAGATGTGGCAACAGGA-CCTCGCTCACGGCCACCGGAGCATATATGC---AGGGA--GGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTC--TGTTTCAGTAAAGAGAGACCTGATCAG------CCATCTGTGTGCTTCCATCCTGCATTAAAATTC-ACTCAGCGTGGTC-CAGAGGTTGTCTA-TTGA---TCTGTATG-----------------CTTTCGCCGTTTTTACGGTAGAGGGATT--GTGGATATTCTCACTGC-ACCTcc-tccttccactcccccaggtcttggtttgcactttgatgatagcatttactgagacggg-cctggagcctgttgaac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 911713 868 - 74750902 tcagggattggacaatggactttggaaccagccagatttgggtgtgaattctagttcctaactgtgtggcgttggatgagtgattcgttgcgactttcgtcccttacaatatgagggtcataacacctgctttataaggttgctgtgaagttttgatgacatcgtgtgtg-aagcccccagcctgagtctagcGTGTGGGAGGCCCGGGGAGGGTTGCCGTCCTCCTCACGCGCTCTG-CCCACTGTCCCTTCCT-GTCCTCTGCCTGTGGTGAGCTCACGGG-CAGAT--GGTCTGAAAGGACCGCCTGGCTCCCTTGCTCTCCAGGTCCGCCGCGAACTCCACGCCCACGTGCCTCTCCTCCAAGTCTCCTTACTGCGCATCAGGAGAGGCTAGCGGACATCAGCTGCAACCAGGCATGTTTCATATGCCAAAAGAG-G--GGGCTGCCCACGGCCTGGG-CCC-----CTACCAGCAGACTGGAGCTGCATTGCTGTGTGGAGAGGCACCCAGAAGTTTCTCATGAAGGGCAGCCGGCCCAAGCCCCTCACCCCAGATGTGGTAACAGGACCCTAGCTCCCGTATAGTGGAGTATATGTGT---GGGGAGGGGGGCTTCACCTGTTCCCAGAGGTGTCCTTGGACTCACCTTGGCACATGTTCTGTGTTTCAGTAAAGAGAGACCTGATCAC------CCATCTGCGTGCT----TCCTGCCTTAACCTTC-ACTCAGTATGACC-CA---GCTGTCCG-TTGA---CTTGTGTG-----------------CTCTCGCCATCTTTACAGTCTAGGGGTT--GTGAATGTGCTCATGGCTCCCTCCTTCCTTCCAATGCCCCAGGTCTTGCTTTGGACTTTGATTA-AGCATTTAGTGAGACTGG-CCTGGAGCCAGTGGAAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65421126 775 - 98207768 TTGAGATCTGGCcaatg-gcccaggagtcaggcagatctgaggttgggttctatt----agctgtgtaggtttgattacttcagtccttactacctttacatcctacagaatgaggttcagagcacctg-------------ctgtgAGTTTTAAGT--------------------------------------------GGCCCAGGAAGCATTGTGGATGTCC------------CTCCACTGCCCCTTTCTCGTCCTTGCCGTACGGTGGGCTCCCAGG-CAGAT--AGGCTGGGTACCCCACAT-GTTATTTTGTTTTCCAGCTCCGCCGTGAACTGCACGCCCGCATGCCACTTGTCCACATGTCCTTCCTGAGCATCAGGAGGGGTTGAGGAATGCTAGCTGCAACCAGGCATGGCCTCTGTGCCAGAAGAACG--GTGATGCC----ACCGAGG-CCCAAACGCTACCAACAGACCACAGCCACAGTTCTGTGCT---ATGGACTCCAAAGTTTCTCATGAAGGCCAGCTGGCTCGAGAGCCCTCCCCCATACCTGACCACAAGACCTTGGTCCACTTATGCCTGAGTGTATGTGC-AAGGGGA--GGGGCTG-ACCTCTTTTCAGAGATGTCCCTCACATCCTCTGCCTGGTTATTG--TATTTCGGTAAAGGGAGACCTGATCAC------TCACCTGTGCTCTTCTGTTTTGTACTCAGTGAC-CCTCAGTATAACCTCAGAGATTATCTG-TAGGGATCCCAGGTG-----------------CCTTAGATGTTTTTACTACGTGGGAATTTGGGGAGTGATTTC-CTGTTGCCTGA-T-------------------TTGGTTTGACATT-----------TTTACCAAGACTTGCCCTGGAGCCTGTTGAAC i mm10.chr16 I 279 I 961 s canFam3.chr33 29054919 883 + 31377067 TCGgg-------------gctctggagccatatggatctgggggtgaattccacttcctgactctgtgaacttgggtaggttgttccatgttattttcttcctctataaaacgaaggt-acagcacctgcttcctaaggttacagtgaggt-tggacgacataatgtgcgcgaagca-cAGTCCGGGCCCAGGCT----GGGGCGCGGAGACTGCTGCTGGCCTCCCTGTGCGTTTGCTCCCACTGTCTCGTCCT-GTTCTCGGCCTGTGGGGAGCTCACGGGCCACATTCGGGCTGGAAGTACCTTCTGCTCCTTTTGCCCTCCAGCTCTGCCGTGAACTGCATGCCCACCTGCCTCCCACCCGGGTCTCTCTGCTGCATGTCACGAGGGGCTGAGGCACATCAGCCGCAGCCAGGGGTGG-CTGTGGGCCCAAAGGG-GCAGCGCTGCCGGCGGCCTGGGACCC-----CCACTTCCCGACTGGAGCTACGCTACAG-GCTGC-ATGTACCTGGAAGCTTCCC-CGAAGGTCAGCT-GCCTAAGGCCTTG-CCCCAGACACTGCAGCGGGACCCTGGCCCACATATGCCAG-GTGTGTGTGTTGGGTGGG--GGGGCTTCCCTTGTT-CCAAAGATGCCCTTGGACTCCCTCTGGCACATGTGTCATGTTGCAGTAAAGAGTGATCTGATCACCTGTCACCCTCGTTGTGCTTCTCTCGGACATTAGAATTCTGCACGGTGTGGCC-CAGAGGTTATCTGTTTGA---GCCATATAGGTTGTTTGGTTAAGGTTTTTTTACGTTTTTATGATACAGGGATT--TTGTGCATCCTCCCTACAACCgccctcctcattctcccctggttcttggtttggaccttgattatggcacttacggaggctggccctggagtctgttgaac i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=550139.000000 s hg38.chr3_KI270935v1_alt 104198 245 + 197351 AGCCCgctgcagcagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcagtgggatcgcagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCCTCT--TATATGTTATAACTTACATGCTATTATTTTTTTAAAAAATTAATATGGTT-TACTTTTTATTATA----AAAGTAAAACTTggcca---ggctc---agtggctca s panTro4.chr3_GL389630_random 64351 245 + 103936 agcccgctgcggcagggcagggaccacctttgttcatctcagtatcccctgaa-ctagcagagtgtctggcctgcggtgggatcgcagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAGTTATTCCTCT--TATATGTTATAACTTACATGCtattatttttttaaaaaattaatatGGTT-TACTTTTTATTATA----AAAGTAAAACTTgacca---ggctc---agtggctca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840432 245 + 123690457 aatgcactgtggcagggcaggaaccacctttgttcatctcaatatcccctgaa-ctagcagagcgtctggcctgcggtgggattgcagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCCTCT--TATATGTTATAACTTACATGCTATTATTTTTTTAAAAAATTAATATGGTT-TACTTTTTATTATA----AAAGTAAAACTTggccg---ggcac---agtggctca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 13351 242 + 111706 agggcgctgtggcagggcaggggccacctttgttcatctcagtatctcctgaa-ctagcagagcgtctggcctgcggtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCtatta-ttttttaaaaaattaatatggtt-tactttttattat------aattaaaaCTTggtca---ggcac---actggctca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 48584 244 + 192460366 agggcgctatggcagggcaggggccacctttgttcatctcagtatctcctgaa-ctagcagagcgtctggcctgcggtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA-TTTTTTAAAAAATTAATATGGTT-TACTTTTTATTATA----AAAGTAAAACTTggtca---ggcac---actggctca i macFas5.chr2 C 0 I 319 s papAnu2.chr2 45029 239 - 187378091 AGTGCTCTATGGCAGGGCAGGGGCCACCTTTGTTCATCTCAGTATCCCCTGAC-CTAGCAGAGCGTCTGGCCTGCGGTGGGATCGCAGAGAA----TGTGGAATTGACCTAAATTTAAATGTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTacatgctatta--tttttaaaaaattaatatggt-----tttttattaga----aaagtaaaacttggcca---ggcac---actggctcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 396271 239 - 91754291 agtgcgctacggcagggcaggggccacctttgttcatctcagtatcccctgaa-ccggcagagcgtctggcctgcagtgggatcacagagaa----tgtGGAATTGACCTAAATTTAAATTTCAAGTTCTGGACACAAGC------------------------CTCAATTATTCTTCT--TATATGTTATAACTTACATGCTATTA--TTTTTAAAAAATTAATATGGT-----TTTTTATTAGA----AAAGTAAAACTTggcca---ggcac---actggctca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 912581 255 - 74750902 AGTGAGTGACAGCAGGGCAGAGGCCACCTCTGTTCACCTCAGTATCCCTTGAG-CTGGCAGGGCATCGAGCCTGTGGTAAGGACGCAGAGAC----TGTGGAATTGACCTGAATT------TCAAGTTCTGGACACAAGCAGATTCAAAAGAAAGTCTGCGATACTTGATTATTCCTCT--CATGTCTTATAACGTACGTGTTACTA--TGTTTTAAAATTAAATGTGGTT-TACTTTTTATTA----------TAAAACTTggcca---ggtgc---agtggctca i calJac3.chr17 C 0 C 0 s canFam3.chr33 29055802 272 + 31377067 tttgagctccttcagagcagggaccatattt-----tctcagtatcctttgaacctagcagagcgcctggcctgtggtaggatcacagagaatgcctgttggattgacttgaatT------TCAAGTTCTGGACATAAGC-AGATCACAGGAAAGTCTGCAGTACTCAATTATTCCTCTCCTCTAGCTCGTAAGT--CGAGttatta-ttattattattattattattattattattattattatATTTTAAAATTAAATGTGGTTATggggctcctgggtggctca i canFam3.chr33 C 0 I 202 e mm10.chr16 65421901 961 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1093.000000 s hg38.chr3_KI270935v1_alt 104443 1 + 197351 c s panTro4.chr3_GL389630_random 64596 1 + 103936 c i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840677 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 13593 1 + 111706 t i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49147 1 + 192460366 t i macFas5.chr2 I 319 C 0 s papAnu2.chr2 45268 1 - 187378091 t i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 396510 1 - 91754291 t i chlSab2.chr15 C 0 I 319 s calJac3.chr17 912836 1 - 74750902 t i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056074 202 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=399814.000000 s hg38.chr3_KI270935v1_alt 104444 201 + 197351 gcctgtaatcccagcactttgggaggccgaggccggtggatcac--gaggtcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaaaacacgaaaattagctgggtgtggtggcaggtgcctgtaatcccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgc s panTro4.chr3_GL389630_random 64597 201 + 103936 gcctgtaatcccagcactttgggaggccgaggccggtggatcac--gaggtcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaaaacacgaaaattagctgggtgtggtggcaggtgcctgtaatcccagctacccaggaggctgagacgggagaatcacttgaacccgggaggcagaggttgc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840678 201 + 123690457 gcctgtaataccagcactttgggaggccgaggccggtggatcat--gaggtcaggagtttgagactagcctggccaacatggtgaaaccccgtctctactaaaaacacaaaaattagctgggcgtggtggcaggtgcctgtaatcccagctaccagggagtctgaggcgggagaatcgcttgaacccgggaggcggaggttgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 13594 203 + 111706 gcctgtaataccagcactttgggaggctggagtgggtggatcacttgagctcaggggtttgaggctggcctgaacaacatggcaaagccctgtctctacgaaaaatacaaaagttagctgggtgtaattgtggacacctgtattcccaggtactcgtgaggctgaggtgggaggatcacttgaacccgggagacagaggttgc i rheMac3.chrUn_JH291127 C 0 I 278 s macFas5.chr2 49148 201 + 192460366 gcctgtaatcccagcactttgggaggccgaggcaggcggatcac--gaggtcaggagtttgagaccaacctggccagcatggtgaaactctgtctctacaaaaaacacagaaattagctgggtgtcgtggcaggggcctgtaatcctagctactcgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 45269 202 - 187378091 gcctgtaataccagcactttgggaggctggagtgggtggatcacttgagctcaggggtttgagactggcctgaacaacatggcaaggc-ctgtctctacgaaaaatacagaagttagctgggtgtgattgtggacacctgtattcccaggtactcgtgaggctgaggtgggaggatcacttgaacccgggagacggaggttgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 396830 201 - 91754291 gcctgtaatcccagcactttgggaggccgaggcaggcagatcac--gaggtcaggagtttgagaccagcctggccagcatggtgaaaccctgtctctacaaaaaacacagaaattagctgggtgtggtggcaggtgcctgtaatcctagctacttgggaggctgaggcaggagaattgcttgaacctgagaagcagaggttgc i chlSab2.chr15 I 319 C 0 s calJac3.chr17 912837 201 - 74750902 gcctgtaatcccaggactttggaaggctgagctgggcggatcgcttgagctcaggagtctgagactggcctgggtaacatggtgaaactctgtctctac-aaaaatacacaaattagctaggtgtaatggcgcacacctgta-tcccaggtactctcgcgactgaggtgggaggatcacttgaacccgggagatggagattgc i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056074 202 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=78266.000000 s hg38.chr3_KI270935v1_alt 104645 78 + 197351 agtgacccaagatcctaccactgcaccccagcctgggcaaaagggcaagactctgtctc--ataaataaataaattt--aaa--------- s panTro4.chr3_GL389630_random 64798 78 + 103936 agtgagccaagatcctgccactgcaccccagcctgggcaaaagggcaagactctgtctc--ataaataaataaattt--aaa--------- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840879 77 + 123690457 agtg-cccaagatcccgaaactgccctccagcctgggcgaaagggcaagaccctgtctc--ataaataaataaactt--aaa--------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 49349 80 + 192460366 agtgacccaggatcccgccgctgcactccagcctgggtgaaagggcaagactctgtctc--ataaataaataaatagataaa--------- i macFas5.chr2 C 0 I 14 s papAnu2.chr2 45471 80 - 187378091 cgtCAGCTGAggtcacacctctgcactccaacctgggtggcgaggtgagaccctgtctccaaaaagtaaatgaataa--aaa--------- i papAnu2.chr2 C 0 I 8 s chlSab2.chr15 397031 80 - 91754291 agtgacccaagatcccactgctacactccagcctgggtgaaagggcaagactctgtctc--ataaataaatatataaataaa--------- i chlSab2.chr15 C 0 I 10 s calJac3.chr17 913038 76 - 74750902 agtcagctgagatcacgcctctgcactcc------ggtgacaaggtgagaccca-------aaaaataaatgaataa--agataaaatgaa i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 13797 278 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056074 202 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=17234.000000 s hg38.chr3_KI270935v1_alt 104723 7 + 197351 ataaaag s panTro4.chr3_GL389630_random 64876 7 + 103936 ataaaag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840956 7 + 123690457 ataaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14075 7 + 111706 aTAAAAG i rheMac3.chrUn_JH291127 I 278 C 0 s macFas5.chr2 49443 7 + 192460366 ataaaag i macFas5.chr2 I 14 C 0 s papAnu2.chr2 45559 7 - 187378091 atgaaag i papAnu2.chr2 I 8 I 323 s chlSab2.chr15 397121 7 - 91754291 ATAAAAG i chlSab2.chr15 I 10 C 0 s calJac3.chr17 913114 7 - 74750902 aTAAAAG i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056074 202 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1694.000000 s hg38.chr3_KI270935v1_alt 104730 1 + 197351 t s panTro4.chr3_GL389630_random 64883 1 + 103936 t i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840963 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14082 1 + 111706 T i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49450 1 + 192460366 t i macFas5.chr2 C 0 C 0 s papAnu2.chr2 45889 1 - 187378091 t i papAnu2.chr2 I 323 C 0 s chlSab2.chr15 397128 1 - 91754291 T i chlSab2.chr15 C 0 C 0 s calJac3.chr17 913121 1 - 74750902 C i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056074 202 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=294443.000000 s hg38.chr3_KI270935v1_alt 104731 111 + 197351 aaaaCTTGTTTATGATTTCAAAATTTTGAAATATTCCAAA-GACCAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAAACTTTTCTATAATCCCACCTCTTAGATACAAC s panTro4.chr3_GL389630_random 64884 111 + 103936 aaaaCTTGTTTATGATTTCAAAATTTTGAAATATTCCAAA-GACCAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAATCTTTTCTATAATCCCACCTCTTAGATACAAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120840964 111 + 123690457 aaaaCTTGTTTATGATTTCAAAATTTTGAAAAATTCCAAA-GACCAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAAACTTTTCTATAATCCCATCACTTAGACACAAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14083 111 + 111706 AAAACTTGTTTATGATTTCAAAATTTTGAAAAATTCCAAA-GACCAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAACATGTCCTATAATCCCACCTCTTAGATACAAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49451 111 + 192460366 aaaaCTTGTTTATGATTTCAAAATTTTGAAAAATTCCAAA-GACCAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAACATGTCCTATAATCCCACCTCTTAGATACAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 45890 111 - 187378091 aaaacttgtttatgatttcaaaattttgaaaaattccaaa-GACCAAGCAAAGTAAGAagtgggaagag--------gagaaagaaaacatgtcCTATAATCCCACCTCTTAGATACAac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397129 111 - 91754291 AAAACTTGTTTATGATTTCAAAATTTTGAAAAATTCCAAA-GACTAAGCAAAGTAAGAAGTGGGAAGAG--------GAGAAAGAAAACATGTCCTATAATCCCACCTCTTAGATACAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 913122 111 - 74750902 AAAACTTGCTTATGATTTCAAAATTTTTAAAAATTCCAAA-GACCAAGCAAAGTAAGAAGTAGGAAGAA--------GAGAAAGAAAAAGTTGTCTATAATCCCACCTCTTATACACAAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29056276 117 + 31377067 AAACCTTGCTTGTGAGTTCACGATTTTGAAAAATTCAAAAGGACCGAGAAAA--AAAAGGCAGAAAGAGAAGTGGGAGAGAAAGAAAAACATCTGTA-AGCCCCACTTCCTATACACAGC i canFam3.chr33 I 202 I 42 e mm10.chr16 65421901 961 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=4011.000000 s hg38.chr3_KI270935v1_alt 104842 2 + 197351 GA s panTro4.chr3_GL389630_random 64995 2 + 103936 GA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841075 2 + 123690457 GA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14194 2 + 111706 GA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49562 2 + 192460366 GA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46001 2 - 187378091 ga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397240 2 - 91754291 GA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e calJac3.chr17 913233 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=423122.000000 s hg38.chr3_KI270935v1_alt 104844 271 + 197351 ----------tttattttttaaaattgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggctcactgcagcctccacctccca-gctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtactttgttttgtaaaaaaggggctttaccatgttgagcaggttggtctcgatcttctgagctcaagcagtcctcctgcctcagactcgcaaagtgctgggattacagacatgagccac s panTro4.chr3_GL389630_random 64997 272 + 103936 ----------tttattttttaaaattgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcggccatggctcactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag----------------ctggctaatttttgtacttttttttgtaaaaaaggggctttaccatgttgatcaggttggtctctatcttctcagctcaagcagtcctcctgcctcagactcgcaaagtgctgggattacagacatgagccac i panTro4.chr3_GL389630_random C 0 I 2908 s nomLeu3.chr11 120841077 286 + 123690457 ----------tttatttttttaaattgagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcttactgcagcctccacctcccaggctccagtgatcctcccacctcagcctcctgaggagctgggaccacag--gtgcgccaccacacctgactgatttttgtacttttttttgtaaagaaggggctttaccatgttgaccaggttgatctcgatctcctgagctcaagcaatcctcctgcctcagactcgcaaagtgctgggattacaggcatgagccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14196 285 + 111706 ----------tttattttttaaaatagagacagggtctcactc---tcacccaaactgcagtgcagtggtacgaccatggcacactgcagccttaacctcccagactccagtgatcctcccttcttagcctcctgaggagctgggaccacag--atgcgccaccacacctggctaatttttgtacttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagcccaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49564 285 + 192460366 ----------tttattttttaaaatagagacagggtctcactc---tcacccaaactgcagtgcagtggtgcgaccatggcacactgcagccttaacctcccaggctccagtgatcctcccatcttagcctcctgaggagctgggaccacag--atgcgccaccacacctggctaatttttgtacttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 397242 285 - 91754291 ----------TTTATTTTTAAAAATAgagacagggtctcactc---tcactcaaactgcagtgcagtggtgcgaccatggctcactgcagcctcaacctcccaggctccagtgatcctcccgtcttagcctcctgaggagctgggaccacag--atgtgccaccacacctggctaatttttgtacttt-ttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctcagactcacaaagtgctgggattacaggcatgagcccc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 913233 299 - 74750902 tttattttattttattattattttttgagatgaagtttcactcttgttgcccagcatggagtgcagtggcatgatcttgggtcacggcaacctctgcctctctgattcaagtggttctcctgcctcagccgcccgagttgctgggactacaggcatgcaccatcacatccagctaattttttttact--tttagtagagatggcgtttctccatgttggtcaggctggtctcaaactcttgacctcaggtgatccgcctgtcttggcctcccaaggtgctgagattaccggcgtgagccac i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e papAnu2.chr2 46003 0 - 187378091 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=26342.000000 s hg38.chr3_KI270935v1_alt 105115 21 + 197351 tgtgcccagccTTATATACAG s panTro4.chr3_GL389630_random 68177 21 + 103936 tgtgcccagccTTATATACCT i panTro4.chr3_GL389630_random I 2908 C 0 s nomLeu3.chr11 120841363 21 + 123690457 tgtgcccagccTTATATACAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14481 21 + 111706 tgtgcccagccTTATATACAG i rheMac3.chrUn_JH291127 C 0 I 23 s macFas5.chr2 49849 21 + 192460366 tgtgcccagccTTATATACAG i macFas5.chr2 C 0 I 6 s chlSab2.chr15 397527 21 - 91754291 tgtgcccagccTTATATACAG i chlSab2.chr15 C 0 I 23 s calJac3.chr17 913532 10 - 74750902 tgcacctggc----------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e papAnu2.chr2 46003 0 - 187378091 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=8112.000000 s hg38.chr3_KI270935v1_alt 105136 16 + 197351 CTATTATTATTAATGT s panTro4.chr3_GL389630_random 68198 16 + 103936 TTATTATTATTAGTGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841384 16 + 123690457 CTATTATTATTAGTGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 49876 16 + 192460366 CTATTATTATTAGTGT i macFas5.chr2 I 6 I 1 e rheMac3.chrUn_JH291127 14502 23 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e calJac3.chr17 913542 0 - 74750902 C e chlSab2.chr15 397548 23 - 91754291 I e papAnu2.chr2 46003 0 - 187378091 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=14806.000000 s hg38.chr3_KI270935v1_alt 105152 87 + 197351 ATACTgtgtattcatttcaattcttaatctctccacttggatgttgatgaaatacatacctcacattcaacatttctttcttttttt s panTro4.chr3_GL389630_random 68214 86 + 103936 ATACTGTGTATTCATTTCAAT-CTTTTTCtctccacttggatgttgatgaaatacatacctcacattcaacatttctttcttttttt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841400 87 + 123690457 ATACTgtgtattcaattcaattcttaatctctccacttggatgttgatgaaatacatacctcacatgcaacatttctttcttttctt i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 913542 12 - 74750902 -------------------------------------------------------------------cAACAAtttatt-------- i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 14502 23 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e chlSab2.chr15 397548 23 - 91754291 I e macFas5.chr2 49892 1 + 192460366 I e papAnu2.chr2 46003 0 - 187378091 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=167288.000000 s hg38.chr3_KI270935v1_alt 105239 288 + 197351 ttttctttttgagatgga-aaggagcctggctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccacctcttgggttcacgtgattctcctgcctcagcctcctgagtatctgggactacagg--tgccaccaccatgctcggctaa-ttttttgaatttttagtagagacggagtttcaccgtgtcagccagcctggtctcaaactcctgacctcaagtgatccacccacctcggcctcccaaagtgctgggattccagttaatgagcact-g s panTro4.chr3_GL389630_random 68300 288 + 103936 tttcctttttgagatgga-aaggagcctggctctgtcgcccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcttgggttcatgtgattctcctgcctcagcctcctgagtagctgggactacagg--tgccaccaccatgttcggctaa-ttttttgtatttttagtagagacggagtttcaccatgtcagccagcctggtctcaaactcctgacctcaagtgacccacccgcctcggcctcccaaagtgctgggattccagttaatgagcccc-g i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841487 288 + 123690457 ttttttttttgagatgga-acggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcaacctccgcctcttgggttcacgtgattctcctgcctcagcctcctgagtagctgggactacagg--tgccgccaccatgctcagctaatttttttgtatttttagtagagacggagtttcaccgtgtcggccagcctggtctcaaactcctgacctcaagtgatccacccgcctcagcctcccaaagtgctgggattccaggc-atgagcacc-a i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 46003 287 - 187378091 tttattttttaaaatagagacagggtctcactc--tcactcaaactgcagtgcagtggtgcgaccatggctcactgcagcctcaacctcccaggctccagtgatcctcccgtcttagcctcctgaggagctgggaccacaga--tg-tgccaccacacttggctaatttttgtactttttttgtaaagaaggggctttaccatgttgaccaggttggtctcgatctcctgagctcaagcaatcctcctgtctctgactcacaaagtgctgggattacaggc-atgagcccctg i papAnu2.chr2 C 0 C 0 s calJac3.chr17 913554 280 - 74750902 -----ttttcaaattgag-acagggcctcactctgtcaccca-actgcagtggagtggtgctgccacagctcactgcagcctcgacctcccatgcttgggtgatcctcccacctcagcctcccgagtagctgggaccacagagttg----caccacacctggctaacttttgtat-ttttctgtagagacgggactttcccatgttgcccaggtttgtctcaatctgctgagttcaaggaatcctcccgcctcagcctcccaaagtgctgggattacaggc-atgagccactg i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 14502 23 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e canFam3.chr33 29056393 42 + 31377067 I e chlSab2.chr15 397548 23 - 91754291 I e macFas5.chr2 49892 1 + 192460366 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=6780.000000 s hg38.chr3_KI270935v1_alt 105527 10 + 197351 ctcctggcct s panTro4.chr3_GL389630_random 68588 10 + 103936 ctcctggcct i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841775 10 + 123690457 ctcccggcct i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 46290 10 - 187378091 tgcccagcct i papAnu2.chr2 C 0 C 0 s calJac3.chr17 913834 10 - 74750902 tgcccagccT i calJac3.chr17 C 0 I 1651 s canFam3.chr33 29056435 10 + 31377067 Ctcctacatt i canFam3.chr33 I 42 C 0 e rheMac3.chrUn_JH291127 14502 23 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e chlSab2.chr15 397548 23 - 91754291 I e macFas5.chr2 49892 1 + 192460366 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=-3563.000000 s hg38.chr3_KI270935v1_alt 105537 5 + 197351 c---------caca s panTro4.chr3_GL389630_random 68598 5 + 103936 c---------cacg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841785 5 + 123690457 c---------caca i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 46300 14 - 187378091 tataTACAGATACA i papAnu2.chr2 C 0 I 18 s canFam3.chr33 29056445 5 + 31377067 -------cggta-- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 14502 23 + 111706 I e mm10.chr16 65421901 961 - 98207768 I e calJac3.chr17 913844 1651 - 74750902 I e chlSab2.chr15 397548 23 - 91754291 I e macFas5.chr2 49892 1 + 192460366 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=87256.000000 s hg38.chr3_KI270935v1_alt 105542 45 + 197351 tttctaaaatcgaagttctgatcttttcctctggacctgccccac s panTro4.chr3_GL389630_random 68603 45 + 103936 tttctaaaatcgaagttctgatcttttcctctggacctgccccac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120841790 45 + 123690457 tttctaaaatcaaagttctgatcttttcctctggacctgccccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14525 45 + 111706 TTtctaaaatcgaagttctgatctcttcctctggacctgccccac i rheMac3.chrUn_JH291127 I 23 C 0 s macFas5.chr2 49893 45 + 192460366 TTtctaaaatcgaagttctgatctcttcctctggacctgccccac i macFas5.chr2 I 1 C 0 s papAnu2.chr2 46332 45 - 187378091 tttctaaaattgaagTTCTGATCTCTTTGTCTGGACCTGCCCCAC i papAnu2.chr2 I 18 C 0 s chlSab2.chr15 397571 45 - 91754291 TTtctaaaatcaaagttctgatctcttcgtctggacctgccccac i chlSab2.chr15 I 23 C 0 s canFam3.chr33 29056450 44 + 31377067 cgtccaaagccagagtcttaatctggatcccaag-ccggctctgc i canFam3.chr33 C 0 C 0 e mm10.chr16 65421901 961 - 98207768 I e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=349614.000000 s hg38.chr3_KI270935v1_alt 105587 159 + 197351 ctgcatcttccccatctcagttaacgtcagttgcatccttcaggtgctcaggccgaaatcctcggcaccgt-ctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccatcaaactgtgcccagaatgtggcccctcctcagca s panTro4.chr3_GL389630_random 68648 160 + 103936 ctgcatcttccccatctcagttaacgtcaattgcatccttcagttgctcaagccgaaatcctcggcaccgttctttattcccc------tctcacattttgca---------ccaggaaattctgctggctctaaggccatctaactgtgcccagaatgtggcccctcctcagca i panTro4.chr3_GL389630_random C 0 T 2788 s nomLeu3.chr11 120841835 160 + 123690457 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagctgaaatccgcggcaccgttctttattccta------tctcacattttgca---------ctgggaaattctgctggctctactgccatcaaactatgcccagaatgtggcccctcctcagca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14570 162 + 111706 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctcctcagca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 49938 162 + 192460366 ctgcatcttccccatctcagttaatgtcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tctctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctcctcagca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46377 162 - 187378091 CTGcatcttccccatctcagttAATGTCAATTGCATCCTTCAGTTGCTCAAGCCGAAATCCTCGGCACTGTTCTTTATTCCTC----TCTCTCACATGTTGCA---------CCAGGAAATTCTGCTGGCTCTACTGCCATCAAACTGTGCCCAGAATCTGGCCCCTCCTCAGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397616 162 - 91754291 ctgcatcttccccatctcagttaatatcaattgcatccttcagttgctcaagccgaaatcctcggcactgttctttattcctc----tgtctcacatgttgca---------ccaggaaattctgctggctctactgccatcaaactgtgcccagaatctggcccctcctcagca i chlSab2.chr15 C 0 C 0 s mm10.chr16 65422862 145 - 98207768 ctgtgtctccctttgctcagttcattcctcttgcacccttcagccgctcctgccg-------ctgaaccattaatcattttcc----tttctcatattttata---------caagaaaattcaaccggtttctcttcc-tcgaacaatgccca---------ctctccccacga i mm10.chr16 I 961 I 8 s canFam3.chr33 29056494 165 + 31377067 ctgtgtccgctccctcctgg-------cagccacgtccttcagttgctcaagccaaagttctcaaaaccagtcttcattcccctagttccctcactctttacacccagctcgccagaggattccactggctctcctgttgtcaaattct--ccagagtccgg-cctttctcagcc i canFam3.chr33 C 0 C 0 e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=24454.000000 s hg38.chr3_KI270935v1_alt 105746 13 + 197351 tctccagtgctac s nomLeu3.chr11 120841995 13 + 123690457 tctccagtgctac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14732 13 + 111706 tctccagtgctac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50100 13 + 192460366 tctccagtgctac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46539 13 - 187378091 TCTCCAGTGCTAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397778 13 - 91754291 tctccagtgctac i chlSab2.chr15 C 0 C 0 s mm10.chr16 65423015 13 - 98207768 tctcggcagccat i mm10.chr16 I 8 C 0 s canFam3.chr33 29056659 13 + 31377067 tctccactgcccc i canFam3.chr33 C 0 C 0 e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68808 2788 + 103936 T a score=199134.000000 s hg38.chr3_KI270935v1_alt 105759 92 + 197351 --caccgagatggtccacgatgccatcatctctcacctgcactacta-------caggtctccctgtttccagctcagcccccac-----ccc-agtctagtcccag s panTro4.chr3_GL389630_random 66020 93 + 103936 --CACCGAGAtggtccacgatgccatcatctctcacctgcactacta-------caggtctccctgtttccagctcagcccccac-----ccccagtctagtcccag i panTro4.chr3_GL389630_random T 2788 C 0 s nomLeu3.chr11 120842008 92 + 123690457 --caccgagatggtccacgatgccatcatctctcacctgcactacta-------caggtctccctgtttccagctctgcccccac-----ccc-agtctagtcccaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14745 92 + 111706 --caccaagatggtccacgatgccgtcatctctcacctgcactacta-------cgggtcttcctgtttccagctctgcccccac-----ccc-agtctagtcccaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50113 92 + 192460366 --caccaagatggtccacgatgccgtcatctctcacctgcactacta-------cgggtcttcctgtttccagctctgcccccac-----ccc-agtctagtcccaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46552 92 - 187378091 --CACCAAGATGGTCCATGATGCCGTCATCTCTCACCTGCACTACTA-------CGGGTCTTCCTGTTTCcagctctgcccccac-----ccc-agtctAGTTCCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397791 92 - 91754291 --caacaagatggtccacgatgccgtcatctctaacctgcactacta-------caggtcttcctgtttccagctctgcccccac-----ccc-agtctagttccaa i chlSab2.chr15 C 0 C 0 s mm10.chr16 65423028 93 - 98207768 --cactcaggtgggctgagatgctactgtctctcac---catgacta-------caga-ctccctgttggtacctgtgcccacctgaacaccc-gctctcatccccg i mm10.chr16 C 0 C 0 s canFam3.chr33 29056672 97 + 31377067 ccctccaag-----cccagctgccaccgtccctctcctggattcctgataccctcgcggctctctctttccacctttgcccccACG----CCC-GGTGTCGTCCCAG i canFam3.chr33 C 0 I 318 e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=244902.000000 s hg38.chr3_KI270935v1_alt 105851 124 + 197351 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcca-atcctcccatttcactcagaagaaaagc-----tccgacaacag-ctgcaaagcc-gtgcacgacctgcgc s panTro4.chr3_GL389630_random 66113 124 + 103936 tgtgtcagccagggctgtctttttacaacgtaaggcagaccacaccacttctttgctcca-atcctcccatttcactcaggagaaaaac-----tctgacaacag-ctgcaaagcc-gtgcacgacctgcgc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842100 129 + 123690457 tgtgtcagcaagggctgtctttttacaacataaggcagaccacaccacttctttgctcca-atcctcccatttcactcagaagaaaagcagagttctgacaacgg-ttgcaaagcc-atgcacgacctgcgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14837 129 + 111706 tatgtcagccagggctgtctttttacaacataaggcagaccacaccacttccttgctcca-atcctcccatttcacttagaagaaaagcagagttctgacaacgg-ctacaaagcc-atacagaacctgcac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50205 129 + 192460366 tatgtcagccagggctgtctttttacaacataaggcagaccacaccacttccttgctcca-atcctcccatttcacttagaagaaaagcagagttctgacaacgg-ctacaaagcc-atacagaacctgcgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46644 129 - 187378091 TGTGTCAGCCAGGGCTGTCTTTTTACAACATAAGGCAGACCACACCACTTCTTTGCTCCA-ATCCTCCCATTTCACTCAGAAGAAAAGCAGAGTTCTGACAACGG-CTGCAAAGCC-ATACAGGACCTgcgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 397883 129 - 91754291 tgtgtcagccagggctgtctttttacaacataaggcagaccacaccacttctttgctcca-atcctcccatttcactcagaagaaaagtagagttctgacaacgg-ctgcaaagcc-atacaggacctgcgc i chlSab2.chr15 C 0 C 0 s mm10.chr16 65423121 122 - 98207768 gatgttagctggaaatttctcttcctagcatgtggcaggc----------ctgtgcttcatactcttccgtttcattcagaggaaaagccaagtttgggcaacagcctgtagaacaggtgaataatgggtac i mm10.chr16 C 0 C 0 e canFam3.chr33 29056769 318 + 31377067 I e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=392418.000000 s hg38.chr3_KI270935v1_alt 105975 223 + 197351 ccct-cccctgcctccttaatttgctgactgcaccgcagccaca---cggacgtctttcttgtcccttgaatgcgctgggcctgc-----tctt--gccttgggacctttctgtgcattgcttagtctgctcagaagccttctcctctacatatccact---tgtctaaaccctctacctccacct--tcatgccccttctcagcgaggtctacc----atgac-----catgctgcctacaaatt--ca s panTro4.chr3_GL389630_random 66237 223 + 103936 ccct-cccctgcctccttaatttgctcactgaaccgcagccaca---cggacgtctttcttgtctcttgaatgcgctgggcctgc-----tctt--gccttgggacctttctgtgcatggcttagtctgctcagaaggcttctcctctacatatccact---tgtctaaaccctctacctccacct--tcatgccccttctctgtgaggtctacc----atgac-----catgctgcctacaaatt--ca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842229 223 + 123690457 ccct-cccctgcctcctgaatttgctcactgcactgcagccaca---cggacgtctttcttgtcccttaaatgcagtgggcctgc-----tctt--gccttgggccctttctgtgcgttgcttagtctgctcagaagccttctcctccacctatccact---tgtctaaaccctctacctccacct--tcacgccccttctcagcgagttctacc----atgac-----catgctgcctacaaatt--ca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 14966 206 + 111706 ccct-cccctgcctccttaatt-------tgcaccacagccaca---ctgacgtctttcttgtcccttgaatgcactgggcctgc-----tctt--gccttgggacctttctgtgcattgctcagtctg---------ctcctcctctgcatatccact---tggct-aaccctctacctccacct--tcacgtcccttctcagcaaggtctgcc----atgac-----catgctgcttaaaaatt--ca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50334 206 + 192460366 ccct-cccctgcctccttaatt-------tgcaccacagccaca---ctgacgtctttcttgtcccttgaatgcactgggcctgc-----tctt--gccttgggacctttctgtgcattgctcagtctg---------ctcctcctctgcatatccact---tggct-aaccctctacctccacct--tcacgtcccttctcagcaaggtctgcc----atgac-----catgctgcttaaaaatt--ca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46773 217 - 187378091 ccct--ccctgcctccttaaTTTGCTCACTGCACCACAGCCAC-------ACGTCTTTCTTGTCCCTTGAATGCACTGGGCCTGC-----TCTT--GCCTTGGGACCTTTCTGTGCGTTGCTCAGTCTGCTCAGGAGCCTCCTCCTCTGCATATCCACT---TGGCT-AACCCTCTACCTCCACCT--TTACGTCCCTTCTCAGCGAGGTCTGCC----GTGAC-----CATGCTGCTTACAAATT--CA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 398012 214 - 91754291 ccct--ccctgcctccttaatt-------tgcaccacagccaca---ctgacatctttcttgtcccttgaatgcactgggcctgc-----tctt--gccttgggacctttctgtgcgttgctcagtctgctcaggagccttctcctctgcatatccact---tggct-aaccctctacctccacct--tcacgtcccttctcagcgaggtctgcc----atgac-----catgctgcttaaaaatt--ca i chlSab2.chr15 C 0 C 0 s mm10.chr16 65423243 242 - 98207768 tgctgtagccgcctctctagcctgctctttgta----agccgcaaagcaaggaacttggctgttcctgggatgtgccagatctgctcaggtcttgggccttggggcctttgtgtgtattgttctgtctgcttagaaggcctctcctccagacatctgctcaatgcct----cctccctctccacctccttctgcccctcctcaaTATACTCTACCCACAATGCCCTTTTCACGCTACATACCGACTGCCA i mm10.chr16 C 0 I 54 s canFam3.chr33 29057087 176 + 31377067 CCCC-CCCCCGCCCCCTGAACTTGCTCACTTCACTGCAGGGACG---CTGACCTCTC------------GGCGCCCGGGAACCCA-----TCAG--GCCTCG---------CATGCACTGCTCAGTTTGCTCAGAGGCCTTCTCCTGCAGATACCGACC---TGACC-AAC-----AGCTCCACCT--CCTT-CCCCCTCTCGGTGGGGCCACCC------GAc-----ca------------------- i canFam3.chr33 I 318 C 0 e calJac3.chr17 913844 1651 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=89646.000000 s hg38.chr3_KI270935v1_alt 106198 33 + 197351 gtctccccttctgtactttgacgtactttatag s panTro4.chr3_GL389630_random 66460 33 + 103936 gtctccccttctatactttgacgtactttatag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842452 33 + 123690457 gtctccccatctgtactttgatgtactttatag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 15172 33 + 111706 gtctccccttctgtactttgatgtactttacag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50540 33 + 192460366 gtctccccttctgtactttgatgtactttacag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 46990 33 - 187378091 GTCTCCCCTTCTGTACTTTGATGTACTTTACAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 398226 33 - 91754291 gtctccccttctgtactttgatgtactttacag i chlSab2.chr15 C 0 C 0 s calJac3.chr17 915495 33 - 74750902 gcctccccttctgtattttgatgtacattatag i calJac3.chr17 I 1651 C 0 s mm10.chr16 65423539 33 - 98207768 gtagccctggctgtcctagaactcactctgtag i mm10.chr16 I 54 I 96 s canFam3.chr33 29057263 27 + 31377067 ------cctcctctgctttgattttcttcttaa i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=90116.000000 s hg38.chr3_KI270935v1_alt 106231 36 + 197351 tgctgatcacaattgaacgtcatacatatttt----gttt s panTro4.chr3_GL389630_random 66493 40 + 103936 tgctgatcacaattgaacatcatacatattttatttgttt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842485 40 + 123690457 cgctgatcacaattgaacatcatacgtattttattcattt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 15205 40 + 111706 tgctgatcacagttgaacatcatacgtattttatttgttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50573 40 + 192460366 tgctgatcacagttgaacatcatacgtattttatttgttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 47023 40 - 187378091 TGCTGATCACAATTGAACATCATacgtattttatttgttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 398259 40 - 91754291 tgctgatcacaattgaacatcatacatattttatttgttt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 915528 26 - 74750902 cgctgatcacgatggaacatcataca-------------- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29057290 40 + 31377067 tgctgattccaacctaacataatacatattttatgtattt i canFam3.chr33 C 0 C 0 e mm10.chr16 65423572 96 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=886495.000000 s hg38.chr3_KI270935v1_alt 106267 333 + 197351 tctttattatctgagtcctccaactagaatgaaagattttgcccattatggtttccctagtgccaagaa------cagtacctggca---cataccaggggctcagt--------------------------aaacatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACAGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTCGGACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCATATATGT-------------TGGGCAGCTGCCGCAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---ATTCAAATCTGTCTCTTCTCC-CAGG s panTro4.chr3_GL389630_random 66533 333 + 103936 tctttattatctgagtcctccaactagaatgaaagattttgcccattatggtttccctagtgccaagaa------cagtacctggca---cataccaggggctcagt--------------------------aaatatt------------------------------------------------tgttagatgaatgaaGGAAACAAGGAGACAATGTTGAT-GCTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACGGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCATATATGT-------------TGGGCAGCTGCCGCAGAAGAGAGACTGAGCTATGTGCCATGGAGG---ATTCAAATCTGTCTCTTCTCC-CAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842525 333 + 123690457 tcattattatctgtgtcccccaactagaatgaaagattttgcccattatggttttcctagtgccaagaa------cagtacctggca---cataccaggggctcagt--------------------------aaacatt------------------------------------------------tgttagatgagtgaaGGAAACAAGGAGACAGTGTTGAT-ATTGCTGTGAGCAAGGGGA----------GTCTGAACGTTTGACGGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATTCG----CCCAT------------------------------------------------------------------------CTT----GGCATATATGT-------------TGAGCACCTGCCACAGAAGAGAGACTGAGCTATGTGCCGTGGAGG---ATTCAAATCTGTCTCTTCTCC-CAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 15245 333 + 111706 tctttattatctgtgtcccccaactagaatgaaaggttttgccctttacggtttccctagtgccaagaa------cagtacctggca---catgccgggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGAACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCAAATATGT-------------TGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---ATTCAAACCTGTCTCTTCTCC-CAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50613 333 + 192460366 tctttattatctgtgtcccccaactagaatgaaaggttttgccctttacggtttccctagtgccaagaa------cagtacctggca---catgccgggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAAGTAGCTTGGACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCAAATATGT-------------TGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGGAGG---ATTCAAACCTGTCTCTTCTCC-CAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 47063 333 - 187378091 tctttattatctgtGTCCCCCAACTAGAATGAAAGGTTTTGCCCTTTACGGTTTCCCTAGTGCcaagaa------cagtacctggca---catgccGGGGGCTCAGT--------------------------AAACATT------------------------------------------------CGTTAGATGAATGAAGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGAT-CCCTTCCATTTCTGGAGTGAGGCA-GAATGAGTTTCATAAGGTAGCTTGGACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCAAATATGT-------------TGAGCACCTGCCTCAGAAGATAGACTGAGCTACGTGCCGTGAAGG---ATTCAAACCTGTCTCTTCTCC-CAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 398299 333 - 91754291 tctttattatctgtgtcccccaactagaatgaaagattttgccctttacagtttccctagtgccaagaa------cagtacctggca---catgccgggggctcagt--------------------------aaacatt------------------------------------------------cgttagatgaatgaaGGAAACAAGGAGACAACGTTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAGCGTTTGACGGAT-CCCTTCCATTTCTGGAGTGGGGCA-GAATGAGTTTCATAAGGTAGCTTGGACAAAAATAATTCG----CTCAT------------------------------------------------------------------------CTT----GGCAAATATGT-------------TGAGCACCTGCCTCAGAAGATAGACGGAGCTACGTACCGTGGAGG---ATTCAAACCTGTCTCTTCTCC-CAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 915554 327 - 74750902 ----tattatctgagtccctcaactacaatgaaagattttgcccattatggtaaccctcgtgcccagaa------tggcacctggca---catatcaggggctcagg--------------------------aaacatt------------------------------------------------tgttggatgaatgaaAG-AACAAGGAGACAACATTGAC-ATTGCTGTGAGCAAGGGGA----------GTGTGAATGTTCGACTGGT-CCCTT-CATTTCTGGAGTAGGGCA-GAATGGGTTTCATAAAGTAGCTTGGACAAAAATAACCCA----CTCAT------------------------------------------------------------------------CTT----GGCACATCTGT-------------TGAGTACCTGCCGCAGAAGAGAGACTGAGCTGTGTGCCATGGAGG---ATTCAAATCTGTTTCTTCTCC-CAGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65423668 511 - 98207768 TCTTTATCACCAGAGTCCTTCAACTATAATCATATCCTTTGCCTATTGTGATGTCCCTAGCTCCTTGCACATAGTCAGTACTTTGTGTgttgtggttgtagctcagtcttggagcaatttctcagcaggaacaaaacactggttttaattcccggcattgaaataaTGACCAAGCTGCTCCATGAGTATGTTAAGTAGTTAATAAAAACAA-CAGATGGCTCTGTG-GTTGCTCTGAATAAGGGGGGGGGGTGTTTGTGTGTGCTCTCAGCTGACGTCCTTGTGTTCTCGGTGTGGGGCAGGAATGAGCTTCATAGAGTGGTT-----GCAAATGATTCAAACTCTTATGATGGTGTGTTTGGTGTGGTATTTGgtgtgtgtgtttggtgtgtgtgtttggtgtggtatttggtgtgtgtgttt----ggtgtgtgtgtTTGGTGTGGTTGGTGAGTGCCTTAAACAGAAGAGAGACCATGCTGTATGCTGAAGAAC---ATTCAAAGATGTCTcaggtcc-tggg i mm10.chr16 I 96 I 927 s canFam3.chr33 29057330 337 + 31377067 gtcttattatccgtctccctcaactggaatgtgagcgttcgctcactccggc-tccctagcgtcccgca------cagtgcctgccg---catgaaaggtgctcggt--------------------------aaatatt------------------------------------------------agttaaatgagtggaGGAAAC---CAGACAACTTCGACTATTGCTGTGCATAAGGGCA----------GTACGTGTATTCAGCTGATCCCCTCCCCCTTGCATGATGAGGCA-GGGTGAGGTTTATAAAGTAGGTTGGACAAAAATAATTCA----ATCAT------------------------------------------------------------------------CCTTCCCAGCATTTTTGC-------------CAGGC-CCTGCAACAGAAGAGAGGC-ATGGTGTGTGCCATGGGGGGTTATTCGCTGATGTCTCTTCCCCACAGG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1219719.000000 s hg38.chr3_KI270935v1_alt 106600 552 + 197351 GATTGAAGTTA-------------GACACGTACAG-CAATAATAAGTtgaaagaacttatttacaccgcatatagcaacaacaggatgcccttaatatatagagaactcttacag----cgcaag---------------------------------aaaataaaaaggcaaacataccagtagaaaaatgg---gtaaatg--------------------------------------------------------------gcaacaggt------------------------------------------------aattcacaaaagaagaaatacaaatgtcctctcctcccgccaccacccc----cc--atgaaaaagaacgtgtgacttcagta-gcaaaaacaggtccattaatacagtgagatattgcttattgtatgtct-gt--------actga--------------tctatact--gggtgctgggcaaacgggcattcttaaacactcctagtagggaagaaattggtacaacctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt---actgatttatcttaaggaagtaatttagaatctgtgccta-----------------------------actgtttacaataactCA--------------------TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTCCCCATGTAACAGTTTGCTTAA s panTro4.chr3_GL389630_random 66866 552 + 103936 GATTGAAGTTA-------------GACACGTACAG-CAATAATAAGTtgaaagaacttatttacactgcatatagcaacaacaggatgcccttaatatatagagaactcttacag----cgcaag---------------------------------aaaataaaaaggcaaacataccagtagaaaaatgg---gtaaatg--------------------------------------------------------------gcaacaggt------------------------------------------------aattcacaaaagaagaaatacaaatgtcctctcctcctgccaccacccc----cc--atgaaaaagaacgtgtgacttcagta-gcaaaaacaggtccattaatacagtgagatattgcttattgtatgtct-gt--------actga--------------tctatact--gggtgctgggcaaatgggcattcttaaacactcctagtagggaagaaattggtacaatctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacctttaactcagcagtttcgtt---actgatttatcttaaggaagtaatTTAGAATCTGTGCCTA-----------------------------ACTGTTTACAATAACTCA--------------------TAGATGAAAAAGGCAAAACAAAACACAAGTAACCTCAAATCTTCCCATGTAACAGTTTGCTTAA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120842858 546 + 123690457 GATTGAAGTTA-------------GACATGTACAG-CAATAATAAGTtgaaagaacttatttacaccgcacatagcgacaacaggatgcccttaatatacagagaactcttacag----agcaag---------------------------------aaaa-aaaaaggcaaacacaccagtagaaaaatgg---ataaatg--------------------------------------------------------------gcaacaggt------------------------------------------------aattcacaaaagaagaaatacaaatgtcctctcctcccaccaccacccc----cc--atgaaaaagaacgtgtgacttcagta-gcaaaaacaggcccattaatacagtgagatattgcttattgtatgtct-gt--------actga--------------tctatgct--gggcgctgggcaaatgggcattcttaaacactcctagtaggaaagaaattggtacagcctttccggaggacaatttaactgatttatttaaagcccgaaaaatgtacatacttttaactcagcagtttcgtt---actgatttatc-taaggaagtaattaagaatctgtgc---------------------------------CTGTTTATAACAACTAA--------------------TAGATGAAAAAGACATAACAAAACACAAATAACCTCAAATCTCCCCAAGTAACAGTTTGCTTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 15578 558 + 111706 GATCGAAGTTA-------------GACATGTACAG-AAATAataaattgaaagaacttatttataccacatatagcaacaacaggatgcacttaa-atatagagaactcttacag----agcaag--------------------------aaaaaaaaaaaaaaaaaggcgaacacaccagtagaaaaatgg---ataaagg--------------------------------------------------------------gcaacaggt------------------------------------------------agttcacaaaagaggaaatacaaatgtcctctcctcccaccaccactcc----cgcaatgaaaaagaacgtgtgatttcacta-acaaaaacaggtccattaatacagtgagaaattgcttgttgcatgtct-gt--------actga--------------tccgtact--gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaagaaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtacacac-tttaactcagcagtttcgtg---actgatttatcttaaggaagtaattaagaatCCGTGCCTA-----------------------------ATT-TTTATAACAACTAA--------------------TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCTATGTAACAGTTTGCTTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 50946 556 + 192460366 GATCGAAGTTA-------------GACATGTACAG-AAATAataaattgaaagaacttatttataccgcatatagcaacaacaggatgcacttaa-atatagagaactcttacag----agcaag----------------------------aaaaaaaaaaaaaaaggcgaacacaccagtagaaaaatgg---ataaagg--------------------------------------------------------------gcaacaggt------------------------------------------------agttcacaaaagaagaaatacaaatgtccTCTCCTCCCACCACCACCCC----CGCAATGAAAAAGAACGTGTGATTTCACTA-ACAAAAACAGGTCCATTAATACAGTGAGAAATTGCTTGTTGCATGTCT-GT--------ACTGA--------------TCCGTACT--gggtgctgggcaaacgggcgttctcaaacactcctaggaggaaagaaattggtacagcctttctggaggacaatttaactgatttatttaaagcctgaaaaatgtacacac-tttaactcagcagtttcgtg---actgatttatcttaaggaagtaattaagaatCCGTGCCTA-----------------------------ATT-TTTATAACAACTAA--------------------TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCTATGTAACAGTTTGCTTAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 47396 579 - 187378091 GATTGAAGTTA-------------GACATGTACAG-AAATAATACATTGAAAGAACTTATTTATACCGCATATAGCAACAACGGGATGCACTTAA-ATATAGAGAACTCTtacag----agtaag-----------------------------aaaaaaaaaaaaaaggcaaacacaCCAGTGGAAAAATGG---ATAAAGG--------------------------------------------------------------GCAACAGgt------------------------------------------------aattcacaaaagaagaaatacaaatgtccTCTCCTCCCGCCACCGCCTCCCCACCCAGTGAAAAAGAACGTGTGATTTCACTA-ACAAAAACAGGTCCATTAATACAGTGAGAAATTGCTTATTGTATGTCT-GT--------ACTGA--------------TCCGTACC--GGGTGCTGGGCAAACGGGCATTCTCAAACACTCCTAGGAGGAAAGAAATTGGTACAGCCTTTCTGGAGGACAATTTAACTGATTTATTTAAAGCCTGAAAAATGTACCTAC-TGTAACTCAGCAGTTTCGTG---ACTGATTTATcttaaggaagtaattaagaaTCTGTGCCTA-----------------------------ATT-TTTATAACAATAGATGAAATCGTTTTCATCAATTtagatgaaaaagacaaaatgaaacacaaataaCCTAAAATCTCCCCATGTAACAGTTTGCTTAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 398632 559 - 91754291 GATTGAAGTTA-------------GACATGTACAG-AAATAATAAATTGAAAGAACTTATTTATACCGCATATAGCAACAACGGGATGCActtaa-atatagagaactcttacag----agtaaga-------------------------aaaaaaaaaaaaaaaaaggcaaaaacaccagtggaaaaatgg---ataaagg--------------------------------------------------------------gcaacaggt------------------------------------------------aattcacaaaaggaaaggggcaaatgtccTCTCCTCCCGCCACCACCCC----CCCAGTGAAAAAGAACGTGTGATTTCACTA-ACAAAAACAGGTCCATTAATACAGTGAGAAATTGCTTGTTGCTTGTCT-GT--------ACTGA--------------TCCGTACT--gggtgctgggcaaacgggcattctcaaacactcctaggaggaaagaaattggcacagcctctctggaggacaatttaaccgatttatttaaagcctgaaaaatgtacatac-tttaactcagcagtttcgtg---actgatttatcttaaggaagtaattaagaatctgtgcCTA-----------------------------ATT-TTTATAACAACTAA--------------------TAGATGAAAAAGACAAAATGAAACACAAATAACCTAAAATCTCCCCATGTAACAGTTTGCTTAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 915881 576 - 74750902 GATTAAAGTTA-------------GAC--GTGCAG-AAATAACAAACTGAAAG---TGACTTACACCTCACAGAGCAACAACAGGATGCCTTTAATATACAGAGAACTCTTAGAGCAACAACAGGatgcctttactatacagagaactcttagagagcagggaaaaaaggcagacacaccagcagaaaaatga---ataaatt--------------------------------------------------------------gcagcaggc------------------------------------------------agttcacaaaagaagaaacacaagcgtcctctcctcccgccaccacccc----acc-gtgagaaagaaggtttgacttc---a-gcagaaacaggtcaattaatacagtgagatagtgcttaccgtgcgtctcgt--------accga--------------tctatgct--gggtgctgggcgaaggggca-tctcagacactcctagtgggaatgaaattggtgcagcctttctggaggacaatttaactcattcatttaaagcctgaaaaatgtacatacctttaattcagcagtttcatt---agtggtttaccttaaggaa-taattaAGCATCTGTGCCTG---------------------------------TTTATAACAACCAA--------------------TAGATGAAAAAGACAAAACGAAACACAAATAACCTAAAATCTCCC-GCGTGACACTTTGGTTAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29057667 683 + 31377067 GGCTAAACTTAGTAGGGGAGGGTGGACATATACAGAaaaaaacaaaccaaaagaacttatttacaccatatatggcaaaaccagaatctccttaatatacaaagagttcttacaa----agcaat--------------------------------------aaaaagggaaatatgccagaggaaagtaggactataaatgttttccaaaagcaggaatataTCTTCCTTTTTGGGTAAGAGCTGTGTTCAGATGAACCCCACACCACAGATTTgagaaataaaagatgtgcaaggcaaaaaaacaaaacaaaacaaaacaaaacacaaaagcaggaatataaatgtttt-----------------------cc--atgaaaaagaaa--------ccagtaggaaaaaaaaagtaaattgatacagtgaggtatt-ctaactatgtgcca-ataggtaaggacttataaaaattataatttccatgatgagggtgtggagggaaaggatagtcttaaacactgttggtgtgaatgaaatcggcacagcctttcgggaggaccatttgac-----tatctaaagacttaaaaatgtgcatccctttaactgagcaatttcattccaaagggtttatcttaaagaaataattaggaatctgtgcaaagaccaataaatcaatgtattcattacagaactgtttataacagctaa--------------------taaaggaaaa----aagacaaaaca-----------aaatgtcTCAGTGTAGTCATTTGGTTAA i canFam3.chr33 C 0 I 36 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=253503.000000 s hg38.chr3_KI270935v1_alt 107152 132 + 197351 ACACTATAGCGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAATTCATGAAATGTTATTTTATCT--TCTT-TTTTCTTAAAATGGAACTTAAAAAA-AATTTTTTTA s panTro4.chr3_GL389630_random 67418 134 + 103936 ACACTATAGTGTTATTTTACGCAAGCTACAGAAGCATTGTTGAAACATATATTTATTAGGACAGAAAAAAGTTCATGAAATGTTATTTTATCTTCTCTT-TTTTCTTAAAATGGAACTTAAAAAA-ATTTTTTTTA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120843404 134 + 123690457 ACACTGTAGTGTTATTTTACGCAAGCTACAGAAGCGTTGTTGAAACATATATTTATTAGGATGGAAAAAAGTTCATGAAatattattttatcttctcttattttcttaAAATCAAACTT-TAAAA-TTTTTTTTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 16136 130 + 111706 ACACTATAGTGTTATTTTTTGCAAGCTACAGAAGCGTTGTTGAAACATG----TATTAAGATGGAAAAAAGTTCATGAAATATTATTTTATCTTCTCTTATTTTCTAAAAGTGGAACTAAAAAAA--TTTTTTTTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 51502 130 + 192460366 ACACTATAGTGTTATTTTTTGCAAGCTACAGAAGCGTTGTTGAAACATG----TATTAAGATGGAAAAAAGTTCATGAAATATTATTTTATCTTCTCTTATTTTCTAAAAGTGGAACTAAAAAAA--ATTTTTTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 47975 135 - 187378091 ACACTATAGTGTTATTTTTTGTAAGCTACAGAAGCGTTGTtgaaacatgtatttattaagaTGGAAAAAAgttcatgaaatattattttatcttctcttattttctaaaaatggaactaaaaaaa-ttttttttta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 399191 136 - 91754291 ACACTATAGTGTTATTTTTTGTAAGCTACAGAAGCGTTGTTTAAACATGTATTTATTAAGATGGAAAAAAGTTCATGAAATATTATTTTATCTTCTCTTATTTTCTAAAAATGGAACTAAAAAAATTTTTTTTTTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 916457 128 - 74750902 ACATTGTAGTGTTACTTTGCATAATCT--AGAAGTTTTGTTGAAACGTA--TTTATTAAGATGGAGAGAAGTTCATGAAATATTATTTTATCTTCTCTTATTTTCTTAAAACGGAACTT--AACA--TTTTTTTAA i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29058350 36 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=507251.000000 s hg38.chr3_KI270935v1_alt 107284 205 + 197351 ACTCCAACCTACCTTTTACACCATCTGCAGAGCTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTCGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--cacggccccatcttccatatcctatgctgcttgcacaggaagcagctcgctaaccccagg- s panTro4.chr3_GL389630_random 67552 205 + 103936 ACTCCAACCTACCTTTTACACCATCTGCAGAGCTTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCAGGATGGAATCCCCACCTTCGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--cacggccccatcttccatatcctatgctgcttgcacaggaagcagctcgctaaccccagg- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120843538 205 + 123690457 ACTCCAAGCTACCTTTTACACCATCTCCAGAGCTTTCCTCTCCCAAATCAAAGCCACTCCTGTTCCTATCTCCAGGATGAAACCCCCACCTTGGTATGCAAGGGTcttcatgatatggcctcagccaactatcttagctccaggt--cgccaccccatcttccatatcctatgctccttgcacaggaagcagctcgctaaccccagg- i nomLeu3.chr11 C 0 I 315 s rheMac3.chrUn_JH291127 16266 204 + 111706 ACTCCAAGCTACCTTTTATACCATCT-CAGAGCCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--cgtggccccatcttccatatcctgtgctccttgcacagggagcagctcgctaaccccagg- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 51632 204 + 192460366 ACTCCAAGCTACCTTTTATACCATCT-CAGAGCCTTCCTCTCCCAAATCAAAGCTACTCCTGTTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTcttcatgatacggcctcagccaactaccttagctccaggt--cgcggccccatcttccatatcctgtgctccttgcacagggagcagcttgctaaccccagg- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48110 201 - 187378091 actcta----accTTTTATACCATCTCCAGAGCCTTCCTCTCCCAAATCAAAGCTACTCCTATTCCTACCTCCGGGATGAAATCCCCACCTCGGTATGCAAGGGTCTTCATGATACGGCCTCAGCCAACTACCTTAGCTCCAGGT--CGCGGCCCCATCTTCCATATCCTGTGCTCCTTGCACAGAGAGCAGCTCGCTAACCCCAGG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 399327 201 - 91754291 ACTCTA----ACCTTTTATACCATCTCCAGAGCTTTCCTCTCCCAAATCAAAGCTACTCCTATTCCTACCTCCGGGATGAAATCCCCACCTTGGTATGCAAGGGTCTTCATGATACGGCCTCAGCCAACTACCTTAGCTCCAGGT--CGCGGCCCCATCTTCCATATCCTGTGCTCCTTGCACAGGGAGCAGCTCGCTAACCCCAGG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 916585 207 - 74750902 ACTCCAAGCTGCCTTTTACACTATCTCTAGAGCTTTTCTCTCCCAAATCAAAGCTACTCCTCTTCCCACCTCCAGGATGAAATCCCCACCTTGGTGTGCAAGGGCcttcaagatttggcctcagccaacttccttagttccaggttctgtgaccccatcttccagattctatgctccttccacagggggcacctcgccaaccccagg- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29058386 192 + 31377067 gtTCCCAAGTACCTTTCACACTGTCTTTAAGGGCTCCCTTTCC-----AAAAGCTAGTCCTGTTCCTACCAAAGGAACAAAACTCCCAGCCTTGTATATCAGGGTCCTCGTGATCAGGGTT-----------CCCAGCTCTGTGTCTCGTAGACCCGCCTGCTATGTCTtatgttacttccacaggtaacttctcactacttccctgt i canFam3.chr33 I 36 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=966239.000000 s hg38.chr3_KI270935v1_alt 107489 382 + 197351 cacacctgctttcatctggagcgtctgcccatcatgattcctccccc--------------------tggtcccttcacctggaaaactcctattcattcctcaaagcccagttcagatggcacctctccatga----cttcatcagattccctacagaggtgctgattttctggtct-----cttgtgtttctgttgtaacacttaacatgctgtattataatgtgcttattttatttacaagtttgttacattgtacgtgctcgaggacaagcagccggtagtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAACTT--TCAG-----------TGGGCTCTGAAAGTT s panTro4.chr3_GL389630_random 67757 387 + 103936 cacacctgctttcatctggagtgtctgcccatcatgattcctccccc--------------------tggtcccttcacctggaaaactcctattcattcctcaaagcccagttcagatggcacctctccatga----cttcatcagattccctacagaggtgctgattttctggtctctttacttgtgtttctattgtaacacttaacatgctgtattataatgtgcttattttatttacaagtttgttacattgtacgtgctcgaggacaagcagccggtggtattcacctctgtcatcacagaagctggcgtggagccctccacat-gagggcactgatgtgtttgctgagtgactgGGAC-AATGGTGGGCCACGTGA-------GCCCCGAAACTT--TCAG-----------TGGGCTCTGAAagtt i panTro4.chr3_GL389630_random C 0 I 3019 s nomLeu3.chr11 120844058 393 + 123690457 cacacctgctttcatgtggagtgtctgcacatcatgattcttccccc---------------------ggtcccttcacccggaaaactcctattcattcctgaaagcccagttcagatggcacctctccatga----cttcgtcagattccctgcaggggtgctgattttctggtctctttacatgtgtttctgttgtaacacttaacatgctgtactataatgtgcttattttatttacaagtttgtTACATTGTACGTGCTCTAGGACAAGCAG-----------CACCTCTGTCATCACAGAAGCTAGCGTGGAGCCCTCCACAT-CAGGGCAACGATGTGTTTGCTGAGTGACTGGGAC-CATGGTGGGCCACGTGAGCAGATGGCCCCGAAACTT--TCAGCTAACTTTTTCTTAGCTCTGAAAGTT i nomLeu3.chr11 I 315 C 0 s rheMac3.chrUn_JH291127 16470 392 + 111706 cacacctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaact-ctattcattcctcaaagcccagttcaggtggcacctctccatga----ctttgtcagattccctacagaggtgctgattttctggtctctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcatggagccctccacct-gagggcactgatgtgtttgcagagtgactgGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAACTT--TCAG-----------TGGGCTCTGAAAGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 51836 393 + 192460366 cacatctgcttccatctggagtgtctgcacatcatgattcttcccct---------------------ggtccctttgcctggaaaactcctattcattcctcaaagcccagttcaggtggcacctctccatga----cttcgtcagattccctacagaggtgctgattttctggtctctttacttgtgtttctgttataacacttaacatgctgtacaataatgtgcttattttatttacaagtttgttacattgtaggtgctctaggacaagcagtcagtagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAACTT--TCAG-----------TGGGCTCTGAAAGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48311 393 - 187378091 CACACCTGCTTCCATCTGGAGTGTCTGCACATCATGATTCTTCCCCT---------------------GGTCCCTTTGCCTGGAAAACTCCTATTCATTCCTCAAAGCCCAGTTCAGGTGGCACCTCTCCATGA----CTTCGTCAGATTCCCTACAGAGGTGCTGATTTTCTGGTCTCTTTACTTGTGTTTCTGTTATAACACTTAACATGCTGTACAATaatgtgcttattttatttacaagTTTGTTACATTGTAGGTGCTCTAGGACAAGCAGTCAGTAGTATTCACCTCTGTCATCACAGAAGCTAGCATGGAGCCCTCCACCT-GAGGGCACTGATGCGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAACTT--TCAG-----------TGGGCTCTGAAAGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 399528 393 - 91754291 CACACCTGCTTCCATCTGGAGTGTCTGCACATCATGATtcttcccct---------------------ggtccctttgcctggaaaactcctattcattcctcaaagcccagttcaggtggcacctctccatga----cttcgtcagattccctacagaggtgctgattttctggtctctttacttgtgtttctgttataacacataacatgctgtactataatgtgcttattttatttacaagtttgttacattttaggtgctctaggacaagcagccgatagtattcacctctgtcatcacagaagctagcaTGGAGCCCTCCACCT-GAGGGCACTGATGTGTTTGCAGAGTGACTGGGAC-AATGGTGGGCCACATAAGCAGATGGCCCTGAAACTT--TCAG-----------TGGGCTCTGAAAGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 916792 375 - 74750902 cacacctgctttcatttggagtttctgcccatcgtgattcgtccccc--------------------ttgtccctccccttggaaaactcctattcattcctcaaagcccagttcagatggcacctctccatga----ctttgtcagattcccTGCAGAGGCACTGATTTCCTGATCTCTTTACTTGTGTTTC-----TAACTCGGAACATGCTGTATTATAAAGTGCTTATTTTATTTACAAGTTTGTTA-------------CTGGGACAAGCAGCCGCCAGTCTTCGC--CAGTCTTCACAGAAGCTAGCATGGAGCCCTCCACAT-GAGGGCGCTGATGTGTTGGCTGAGTGACCGAGACGAATGGCGGGCCACGTGAGCAGGTGGCCCCAAAACTT--GCAG-----------TGAGCTCTGAAAGTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29058578 409 + 31377067 catacctgctttgatccagagagtttgtacatcatgactcttgcccccaggatgctctcccgctctctggtccctccatctggaaaacttctgttcatgcttagaggcccagttcattcggtgcctccttgtggtggctttcctcaaattccctgaggagggtctagtttcatcgtcccttta----tgtttctgttatgacacttaacatactacat-----cctgcttcattcgcttatgagttggttaagtcatctgtgcttcaggacaggtgccatgcggtactcctccctgtagccacagaacctagtgcagagctctgtacctggaggatactcagctgttcgctgcataactgaGAG----GATGGGCCACGTGAGCAGGTGACCATGAAATATGGGCAC-----------TGGGCTCTGAAAGGT i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=193299.000000 s hg38.chr3_KI270935v1_alt 107871 94 + 197351 AAGAAAAGGGCATTCAGTACTGAAATCACACAAAacgtaaatttaatgatataattgttccgaagctgctctataatttggcatgaatggagag s nomLeu3.chr11 120844451 91 + 123690457 AAGAAAATGGCATTTGGTATTGAAGTCACACAAAATGTAAatttaatgatat---tgttctgaagctgcactataattaggcatgaatggagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 16862 94 + 111706 AAGAAAATGGCATTCGGTATTGAAGTCACACAAAATGTAAatttaatgatataattgttctgaagctgcactataattaggcatgaatggagag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52229 94 + 192460366 AAGAAAATGGCATTCGGTATTGAAGTCACACAAAATGTAAatttaatgatataattgttctgaagctgcactataattaggcatgaatggagag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48704 94 - 187378091 AAGAAAATGGCATTCGGTATTGAAGtcacaaaaaatgtaaatttaatgaTATAATTGTTCTGAAGCTGCACTACAATTAGGCATGAATGGAGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 399921 94 - 91754291 AAGAAAATGGCATTCGGTATTGAAGTCACACAAAATGTAAatttaatgatatgattgttctgaagctgcattataattaggcatgaatggagag i chlSab2.chr15 C 0 C 0 s calJac3.chr17 917167 94 - 74750902 AAGAAAATGGCAGTTGGTATTGAAGTCAAACAAAATGTAAATGTAATGATATAATTGTTATGAAGCTGCACTATAATTAGGGATGGATGAAGAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29058987 88 + 31377067 GAGAAAATAGTATTTAATATTGAAATCTAACAAAATATTAATTTAACGATATCATT------AAGCTACACTATAGTTAGGCATGAATGGATTG i canFam3.chr33 C 0 I 416 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=55271.000000 s hg38.chr3_KI270935v1_alt 107965 31 + 197351 cagtttacaaaaatgacAA---CACCACTGTTAT s nomLeu3.chr11 120844542 34 + 123690457 cagtttacaaaagtgacaataaCACCACTGTTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 16956 34 + 111706 cagttgacaaaaatgacaacagcaccactgttat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52323 34 + 192460366 cagttgacaaaaatgacAACAGCACCACTGTTAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48798 34 - 187378091 CAGTTGACAAAAATGACAATAACACCACTGTTAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400015 34 - 91754291 cagttgacaaaaatgacaataaCACCACTGTTAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 917261 34 - 74750902 CAGTTTACGAAAGTGACAATAACACCACTGTTAC i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29059075 416 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=92227.000000 s hg38.chr3_KI270935v1_alt 107996 48 + 197351 ATAAACCCAATTCTTAAATAGGTTTTCTTCTCTTGCTTTGTATTTCCT s nomLeu3.chr11 120844576 48 + 123690457 ATAAACCCAGTTCTTAAATAGGTTTTCTCCTCTTGCTTTGTATTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 16990 48 + 111706 ataAACCCAATTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52357 48 + 192460366 ATAAACCCAGTTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48832 48 - 187378091 ATAAACCCAATTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400049 48 - 91754291 ATAAACCCAATTCTTAAATAGTTGTTCTTCTCTTGCTTTGTACTTCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 917295 41 - 74750902 ATAAACCCAATTCTTA-------GTttttgttttgttttgtttttttt i calJac3.chr17 C 0 I 49 s canFam3.chr33 29059491 48 + 31377067 ATAAATCCTATTCTTAAGTAGTTTTTCTTTTCCTGCTTTGCATTTATT i canFam3.chr33 I 416 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=195627.000000 s hg38.chr3_KI270935v1_alt 108044 150 + 197351 CAAGTGGGTGATACTTAATACAGTGGCTCATGTAATCTTAATTAC-TACATAT---GAGGACAC-------------------------GGACATGTACATATGATGC-----------TGATTACTGTTATTTTTGGAAGTAAAAAAATTGTAAAATTTGACTAGCTTAAAAAATCTGTAAAATATGGG s nomLeu3.chr11 120844624 148 + 123690457 CAAATGGGTGATACCTAATACAGTGGCTCATGTAATCTTAGTTAC-TACATAT---GAAGACAC---------------------------ACATGTACGTATAGTGC-----------TGATTACTGTTATTTTTGGAAGTAAAAAAATTGTAAAATTTGACTAGCTTAAAAAATCTGTAAAATATGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17038 174 + 111706 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATAT---GAGGACACATGTACACACATATATGTACATGACATATATGTACATATAATGT-----------TGATTATTGTTATTTTTGGAAGTAAAAAAA-TGTAAAATTTGACTAGTTTTAAAAATCTGTAAAATATGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52405 174 + 192460366 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATAT---GAGGACACATGTACACACATATATGTACATGACATATATGTACATATAATGT-----------TGATTATTGTTATTTTTGGAAGTAAAAAAA-TGTAAAATTTGACTAGTTTAAAAAATCTGTAAAATATGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 48880 175 - 187378091 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAC-TACATATGAGGAggacacatgtacacacatatatgtacatgacatttatgtacatataatgc-----------tggtta---ttatttttggaagtaaaaaaagtgtaaaatttgactagtttaaaaaatctgtaaaatatggg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400097 172 - 91754291 CAAATTGGTGATACCTAATACAGGGGCTCATGTAATATTAATTAG-TACATAT---GAGGACACATGTACACACATGTATGTACATGACATATATGTACATATAATGC-----------TGATTA---TTATTTTTGGAAGTAAAAAAAGTGTAAACTTTGACTAGTTTAAAAAATCTGTAAAATATGGG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29059539 130 + 31377067 TGAATCGAGGATACCTGATAAAGTGGATAATTT-ATTTTAATTACATGCATAT---AAGGGCAT---------------------------ATATGTACATGCAATGCTTCCAATAACATGATTACTGTTA---TTGGAAGCCAAAAAT--------------------------TTTGTAAAATATAGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e calJac3.chr17 917336 49 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=375646.000000 s hg38.chr3_KI270935v1_alt 108194 311 + 197351 ATACACAAATTAGAgactgggtgcggtggctcatgcctgtaatcccagcactttgagaggccgaggcaggcggatcacttgaggccaggagtttgagaccaacccaggcaacatggtgaaatcctgtctctactaaaaatacacaaattagctgggcatagtggcaggtgcctgtaatcccaactactcaaaagggtgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgcgtcactgcactccagcctgg-tgacagagcgagaccgtgtctcaaaaCGTCAACAAGAA s nomLeu3.chr11 120844772 310 + 123690457 ATACACAAATTAGAggctgggtgcggtggctgacgcctgtaatcccagcactttgagaggccgaggcgggcggatcac--gaggtcaggagtttgagaccaacctaggcaacatggtgaaaaactgtctctactaaaaatacacaaattagctgggtgtagtggcaggtgcctgtaatcccagttactcaggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagctgagactgcgtcactgccctccagcctgggtgacagagcgagaccgtgtctcaaaaCATCAACGACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17212 308 + 111706 ATACACAAATCAGAggctgggtgcggtggctcacgcccgtaatcccggcactttgagaagcgaaggcgggcagatcacttgaggccagaagtttgagaccaacttaggcaacatggtgaaatcctgtctctactaaaaatacacaaattagctgggtgtggtggcatgtggctggaatcccaactactcaggaagctgaggcaggagaatcacttgaacccgggaagtggaggttgccgtgagcagagattggatcactgcactccagcctgg-cgacagagcgagcccctgtctcaaaa---caacaacaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52579 308 + 192460366 ATACACAAATCAGAggcagggtgcggtggctcacgcctgtaatcccggcactttgagaggccaaggcgggcagatcacttgaggccagaagtttgagaccaacttaggcaacatggtgaaatcctatctctactaaaaatacacaaattagctgggtgtggtggcatgtggctgtaatcccaactactcaggaagctgaggcaggagaatcacttgaacccgggaagtggaggttgccctgagcagagattgcatcactgcactccagcctgg-cgacagagcgagcccctgtctcaaaa---caacaacaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 49055 308 - 187378091 ATACACAAatcagaggctgggtgcggtggctcacgcctgtaatcccagcactttgagaggccaaggtgggtggatcatttgaggccagaagtttgagaccaacttaggcaacatggtgaaatcctgtctctactaaaaatacacaaactagctgggcgtggtggcatgtggctgtaatcccaactactcaggaggctgaggcaggagaatcgcttgaactcaggaagtggaggttgccgtgagctgagattgcgtcactgcactccagcctgg-cgacagagcgagcccctgtctcaaaa---caacaacaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400269 308 - 91754291 ATACACAAATCAGAggctgggtgcggtggctctcgcctgtaatcccagcactttgagaggccgaggcaggcggatcacttgaggctagaagtttgagaccaacttaggcaacatggtgaaatcctgtctctactaaaaatacacaaattagcagggcgtggtggcatgtggctgcaatcccaactactcaggaggctgaggcaggagaatcgcttgaacccaggaagtggaggttgctgtgagctgagattgtgtcactgcactccagcctgg-cgacagagcgagcccctgtctcaaaa---caacaacaa i chlSab2.chr15 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29059669 0 + 31377067 C e calJac3.chr17 917336 49 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=120584.000000 s hg38.chr3_KI270935v1_alt 108505 111 + 197351 CAACACAAATTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCATGTGG---GTGGGTTGGGGGGGGACAATAAAGAGGAAGA---------GAGACtgtgtgtgtg----------tgt----gtgtgtg s nomLeu3.chr11 120845082 117 + 123690457 CAACACGAATTAGAAGCATTTGGGAACTAAAGAGTATAATTATGATTGCATGTGGTGCGGGGGTTGGGGGGA-ACAATAAAGAGGAAGAA-----AGAGAGAAtgtgtgtgtg----------tgt----gtgtgtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17520 117 + 111706 caaaacaaaTTAGAAGCATTTGGGAACTAAAATGTATCATTATGATTGCATGTGG------TGGTGGGAGGA-ACAATAAAGAGGAAGAA-----AGAGAAtgtgtgtgtgtgtgtaaa----tgt----gtatgtg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 52887 121 + 192460366 caaaacaaaTTAGAAGCATTTGGGAACTAAAATGTTTCATTATGATTGCATGTGG------TGGTGGGAGGA-ACAATAAAGAGGAAGAA-----AGAGAAtgtgtgtgtgtgtgtaaatgtgtgt----gtatgtg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 49363 130 - 187378091 caaaacaaattagaAGCATTTGGGAACTAAAATGTATCATTATGATTGCATGTGG------TGGTAGGGGGG-acaataaagaagaagaaaaaagagagaatgtgtgtgtgtgtgtgtatgtgtgtgcgcgtatgtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400577 113 - 91754291 caaaacaaaTTAGGAGCATTTGGGAACTAAAATGTATCATTATGATTGCATGTGG------TGGGGGGGGGG-ACAATAAAGAGGGAGAA-----AGAGAGAGAAtgtgtgtgtg--------tat----gtatgtg i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29059669 89 + 31377067 CTATGCCAATTAGAAGCATTTGGGAACTAAAGTGTATAATTAtgtgtgtgtgtgt------gtgtgtgagag-a-gagagagagagagag-----agagaga----------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e calJac3.chr17 917336 49 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=23158.000000 s hg38.chr3_KI270935v1_alt 108616 20 + 197351 tgtgtg--------CACGCCTGTATTAC s nomLeu3.chr11 120845199 28 + 123690457 tgtgtgtgCGCGTGCATGCCTGTATTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17637 28 + 111706 cgtgtgtgtgtgCGCACACCTCTATTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 53008 28 + 192460366 cgtgtgtgtgtgCGCACACCTCTATTAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 49493 28 - 187378091 tgtatgtacgcGCACACACCTATATTAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400690 28 - 91754291 tgtgtgtgcgtgCACACACCTGTATTAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 917385 14 - 74750902 TGTGTG--------------TGTATTCC i calJac3.chr17 I 49 C 0 s canFam3.chr33 29059758 7 + 31377067 ---------------------gaATTAC i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 68144 3019 + 103936 I a score=531385.000000 s hg38.chr3_KI270935v1_alt 108636 207 + 197351 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA-GTGTGTGTATATGAGGTAAAAATGCCAC--GTTTTATAAAGACAAATTTAAGCATGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGTGTGAGCTCTGAGACGGC s panTro4.chr3_GL389630_random 71163 209 + 103936 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCTAACAGGAGCCAGAAGTCCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAA-GTGTGTGTATATGAGGTAAAAATGCCACATGTTTTATAAAGACAAATTTAAGCGTGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGC i panTro4.chr3_GL389630_random I 3019 C 0 s nomLeu3.chr11 120845227 207 + 123690457 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAGCCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTGAA-GTGTATGTATATGAGGTAAAAATGCCAC--GTTTTATAAAGACAAATCTAAGCGTGGACCTAAACCAGATGGCCTGTCTAAAGTCACCTGTGACTCGGCGTGAGCTCTGAGACGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17665 210 + 111706 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAAGGTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCGTGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i rheMac3.chrUn_JH291127 C 0 I 15 s macFas5.chr2 53036 210 + 192460366 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAAGGTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCGTGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACGGC i macFas5.chr2 C 0 I 11 s papAnu2.chr2 49521 210 - 187378091 TGGAGATGACCAAAGTTAGCAGGAGTAACGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAAGGTGCGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCGTGGACCTAAACAAGATGGCCTGTCTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGACAGC i papAnu2.chr2 C 0 I 11 s chlSab2.chr15 400718 210 - 91754291 TGGAGATGACCAAAGTTAGCAGGAGTAATGTTACCAAACCAACAGGAGCCAGAAGTGCCTGGAGAAAACTCTCCAGCTATTTAAGATTCTAAAGGTGTGTGTATATGAGGTAAAAATGTCACATGTTTTATAAAGACAAATTTAAGCGTGCGCCTAAACAGGATAGCCTGTTTAAAGTCACCTGTGACTTGGCGTGAGCTCTGAGATGGC i chlSab2.chr15 C 0 I 15 s calJac3.chr17 917399 204 - 74750902 TGGA-ATGGTCAACCTTACCAGGAGTAATGTTACCAAACCAGCAGGAGCCAAAAGCACCCGGAGAAAACTCTCCAGAGATTGAAGATTCCAAA--GGGGTGCATGTGAGGTAAAACTGTCAC--GTTTTATAAAGACAAATGGAAGCGTAGTCCT-AACAAGACAGCCCGTCTGAAGTCCCCGGCGACTCTGCGTGAACTGTGAGTTGGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29059765 202 + 31377067 TGGAGATGACCAGAATTAGCAGAACTAATGCAAGAACAGCAGCAAGAACCCGAAG-GCCTGGGGAAAATTCTCCAGTTATTTAAGACT-TAAAGGTGTGTGTGTATGAGGTGAAA-TGGCACATATTTCATGAAAATGGAGCGGGGTGTGGACTTAAACAAGATAGCCTGGCTAAAGTCACCTGTGAC--AGCACAAACACACAGGC--- i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=917.000000 s hg38.chr3_KI270935v1_alt 108843 8 + 197351 -GAAACTCC s panTro4.chr3_GL389630_random 71372 8 + 103936 -GAAACTCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120845434 8 + 123690457 -AAAACTCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 53257 4 + 192460366 -GAAG---- i macFas5.chr2 I 11 C 0 s papAnu2.chr2 49742 4 - 187378091 -GAAG---- i papAnu2.chr2 I 11 C 0 s calJac3.chr17 917603 8 - 74750902 -GAAACTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29059967 8 + 31377067 AAAAACAC- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 17875 15 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e chlSab2.chr15 400928 15 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1409769.000000 s hg38.chr3_KI270935v1_alt 108851 564 + 197351 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAGTCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTGAATGGAAACGAATTCCGTGGGTGCGCCCCACACTTTAAT-AGTGGCCATCATATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGCATCATGCCAGTGACCTATCACTCATCATCCCAGTCATT--AAGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCTTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGGGGTCGGGG-GTCTGCACCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCC---TGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACTTGTAGCCAGGGAATGAGCTGACGAAAATGGATGGT s panTro4.chr3_GL389630_random 71380 567 + 103936 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAGTCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAAAGCATTTGAATGGAAACGAATTCCGTGGGTGCGCCCCACACTTTAAT-AGTGGCCATCGTATCACTTTCTGGTGCCAGTAAATGCGTAAAGGGGTGCATCATGCCAGTGACCTGTTACTCATCATCCCAGTCATT--AAGCCACTTACTTCAGGCCTGTGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCCAGATAGCTCCCTTTGCCACT--CTCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------AGCAGAGGTCGGGG-GTCTGCACCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCCCCATGGGG--------AAGGGTCAGTCAGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACTTGTAGCAAGGGAATGAGCTGACGAAAATGGATGGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120845442 572 + 123690457 ACAGCAATGATGAAGACAACGTGAGGTGGAACTTCTCTCACCAGAGACCTCATCTGAAGCTTCTGCCACAGCCAGTCCTGCCTTCATCCCTTGAGAGGGG------------------GATTGGCCACCAAAGTATGCAGAGCATTTGAATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAAT-CGTGGGCATCATATCACTTTCTGGTGCCAATAAATGCGTAAAGGGGTATATCATGCCAGTGACCTATTACTCATCATCCTAGTCATT--AAGCCACTTACTTCAGGCCTACGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGCACAAGGGAGTCTGTGTCTTTGGCCAAGCTTCACCCCAGATAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCAGCTG-CTGCCACC------TGCAGGGGATGGGG-GTCTGCGCCCTTCTCTCTTCCAAGCAAACTCACACCTGGCACCC---TGGGAAGTTTGCTAAGGGTCAGTCTGTTATTTTATTCCAGGGGCCAAAGCGACAGAATCCAGACCACCTGTAGCCAGGGAATGAGCTGACGAAAATGGATGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 17890 566 + 111706 ATAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAGTCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCATATTATGCAAAGCATTTGAATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCATGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGTTACTCATTATCCTAGTCATT--AAGCCACTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGAGAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCGCCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTTGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i rheMac3.chrUn_JH291127 I 15 C 0 s macFas5.chr2 53261 566 + 192460366 ATAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAGTCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTGAATGGAAACAAATTCCATGGGTGTGCCCCACACTTTAATGAGTGGACAGCATGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGTTACTCATTATCCTAGTCATT--AAGCCACTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCCAGAGAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCGCCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 49746 566 - 187378091 ACAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTTCTGCCATAGCCAGTCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTGAATGGAAACAAATTCCATGGGTGTGCCCTACACTTTAATGAGTGGACAGCATGTCACTTTCTGGTGCCAATAAATGCGTAAAGGTGTGTATCATGCCAGTTACCTGTTACTTATTATCTTAGTCATT--AAGCCATTTACTTCAGGCCTGCGGGGAGTTTCTGGAAGGCTCCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTAGCCAAGCTTTGCCCTAGATAGCTCCCTTTGCCACT--CCCGAGCCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCACCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 400943 565 - 91754291 ACAGCAATGATGAAGACAATGTGAGGTGGAACTTCTCTGACCAGAGACCTCATCTGAAGCTCCTGCCACAACCAGTCCTGCCTTCATCCCTTGTGAGGGG------------------AATTGGCCACCAAATTATGCAAAGCATTTGAAAGGGAACAAATTCCATGGGTGTGCCCCACACTTTAATGTGTGGGCAGCATGTCACTTTCTGGTGCCAATAAATGTGTAAAGGTGTGTGTCATGCCAATTACCTATTACCTATTATCCTAGTCATT--AAGCCACTTACTTCA-GCCTACGGGGAGTTTCTGGAAGGCTTCTTTGA-AGCAGGGAAGAATGGGCAAGGGAGTCTGTGTCTTTGGCCAAGCTTTGCCCTAGATAGCTCCCTTTGCCACT--CCCGAGTCCACTGAAGGTGTCCCGGCTGCCTGCCACC------AGCAGGGGACGGGG-GTCTGCACCCTTATTTCTTCCAAGCAAACTCACACCTGGCACCC---CGGGG--------AAGGGTCAGTCAGTTCTTTTATTCCAGGGGCCAAAGCGACAGAATTCAGACCACTCGGAGCCAGGGAATGAGCTGACGAAAATGGATGGT i chlSab2.chr15 I 15 C 0 s calJac3.chr17 917611 557 - 74750902 ACAGCA---ATGAAGACAGCATGAGGTGGAACTTTTCTGCCCAGAGACCTCATCTGAAGCTTCGGCCACAGCCAGTCCTGCCTTCATCCTTTGTGAGGGG-------------------ACTGGCCACCAAATTATACAAAGCA-GTGAATGGACGTACATTCCATGGGCACGCCCCATACCTTCATGAGTGGGCGGCACACCACTTTCTGGTGCCAGTAAATGCTTGAAGGGGCATATCACGCCAGTTACCTATTACTCATCATCCTGGTCATT--AAGCCCCTGACTTCA-GCCTGTGGGGAATTTCTGGAAGGCTCCTTCAAGAGCAGGGAAGAAGGGGCAAGGGAATTTGTGTCTCTGGTCGCGCTTTGTCCCAGATG---------GCCACT--GCTGAGCCCACTGAAGGTGTTCCAGCTGCCTGCCACCAGGAAGAGCAGGAGACAGGG-GTCCGCGCTCTTCTCTCTGCCAAGCAAACTCATGCCTGGCACCC---TGGAG--------AAGAGCCAGTCAGTTCTTTCATTCCA-GGCCCAAAGTGACAGAATCCAGAGCACTCAGAACCAGGGAGTATGCTGAGGAAAACGCATGGT i calJac3.chr17 C 0 I 316 s canFam3.chr33 29059975 542 + 31377067 AAGGCCGTGACGAAGACAACGTGAGGTGGGACTATTGTGACAAGAGACTTCAGCTGAAGCTCCCGCCACAGCCAGTCCTTTGTTCAACCTCTGTAAggggcggggggggggcgggggggggccgccACCAGTGAGTGGAAAGCA-CTGAATGGCAACTGATCCCACGGGTGTACCCCAAATTCAAATGAGTGGGC-----GTCATTTTTTGGCATCAATAAATGTTTACATTGGTCTACGATGCCAGTTATCCATTGTTTGCTATCTTGGTCTTTAAAAGCTGCTCATCTTAAGCTCATGGGGATTTTCTGGAAGGTTCCTTGGAGAACAGGGAAGTATAAGCA----------TGTCT----------------CCAGACAGCTCCCTTTAAGGGTGCCCCGGGCCCACTGAGGGTGTTTCAACTGCCTG-CACC------AACTGGGAATGGGGTGGAGGCTTCTCCCCCTCTGCCAGGCTAACACGGGCCTGGAACCC---TGAAG--------AAGGGTCCATCAGTTC-TTCATTCTAGGTGCATAAGCAGCAGAATCCACATCACACAGATTCGGCGGGTGGGCTGA-------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=96246.000000 s hg38.chr3_KI270935v1_alt 109415 48 + 197351 TGTGTCCTTGTCCTTCTGACTGTCCCACTCGTGAAGGGGCAGCTCCCT s panTro4.chr3_GL389630_random 71947 48 + 103936 TGTGTCCTTGTCCTTCTGACTGTCCCACTCGTGAAGGGGCAACTCCCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846014 48 + 123690457 TGTGTCCTTGTCCTTCTAACTGTCCCACTTGTGAAGGGGCATCTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 18456 39 + 111706 TGTGTTCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 53827 39 + 192460366 TGTGTTCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 50312 39 - 187378091 TGTGTCCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 401508 39 - 91754291 TGTGTCCTTGTCCTTCTAACTGTCCCACTCATGAAGGGG--------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 918484 48 - 74750902 TGTGCCCATGTCCTTCTAACTGTCCCACTCATGAAGGGGCAGCTCCCT i calJac3.chr17 I 316 C 0 s canFam3.chr33 29060517 34 + 31377067 --------------TCTGACTGCACCACTCACCAAGAGGCCTTTCCTT i canFam3.chr33 C 0 I 669 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=366350.000000 s hg38.chr3_KI270935v1_alt 109463 164 + 197351 GTCCAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCCTTTCTTGGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGCGGCTTTGACTGGGCTCACCAAGaaaacacagaacagccacttaaatgagaacctcggataaacggtgaacacttaaaaatatac s panTro4.chr3_GL389630_random 71995 164 + 103936 GTCCAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCCTTTCTCGGGACGCCTCCTCCTCCCGTGCTGTCAGGGCCTCAGCGGCTTTGACTGGGCTCACCAAGaaaacacaggacatccacttaaatgagaacctcagataaacggtgaacacttaaaaatatac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846062 163 + 123690457 GTCCAGCTAGAGAAGGGTGTCCCCAGGTGCCTTCTCCTTTCCC-GGACGCCTCCTCCGCCCATGCAGTCAGGGCCTCAGCGGCTTTGACTGGGCTCAACAAGaaaacacaggacgcccagttaaattagaacctcagataaatgatgaacacttaaaaatagac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 18495 161 + 111706 ---CAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCCTTTCTTGGGACGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCAAGaaaacacaggacgtccagttaaatgagaacctcagataaacgatgaacacttAAAAATATAC i rheMac3.chrUn_JH291127 C 0 I 184 s macFas5.chr2 53866 161 + 192460366 ---CAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCCTTTCTTGGGACGCCTCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCAAGaaaacacaggacgtccagttaaatgagaacctcagataaacgatgaacacttAAAAATATAC i macFas5.chr2 C 0 I 183 s papAnu2.chr2 50351 161 - 187378091 ---CAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCTTTTCCTGGGACGCCTCTTCCTCCCATGCAGTCAGGGCTTCAGTGGTTTTGACTGGGCTCACCAAGAAAACACAGGATGTCCAGTTAAATGAGAACCTCAGATAAACGatgaacacttaaaaatatac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 401547 161 - 91754291 ---CAGCTAGAGAAGGGTGTCCCCAGGTGCCCTCTCCTTTCCTGGGACGCCCCTTCCTCCCATGCAGTCAGGGCCTCAGTGGCTTTGACTGGGCTCACCAAGaaaacccaagatgtccagttcaatgagaacctcagataaacgatgaacacttaaaaatatac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 918532 162 - 74750902 GTCCAGCTAGAGGAGGGTGTTCCCCGGTGCCCTCTCCCTTCCTGTGATGTCTCCTCCTCCCTCACAGTCAGGGCCTCAGCAGCTTTGACTgggttcaccaagaaaacacaggacgtccagttaaattagaaccttggataaatgacggacacttaaaaacac-- i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1553075.000000 s hg38.chr3_KI270935v1_alt 109627 726 + 197351 aagaatgttccaaatagttcatgggatatctttaaactaaaacaattatttgtggttaatctgaaatttaagctgggctgcttgtattttcatttgctaaattggacagccctaCtttc----------attattattattattattattattgagacccagtctcactctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgcgccaccacgcccagctaatttgttatatttttggtagaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctcccaaagtgctgggattacaggtgtgagccaccacacctggccCAGACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGGCTCCTCTCTTCCGTCCAATCTGCGGGTCTCCTTCAGGGGTAGCAAGCTCCCAGCCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGGCTCTGTCCTCCCGCTCCCTCCATTGCTTA------------------GTGTGTGAAGGTGGACAGGGGAGGAGGGACCTTGGGTTTGGGGCGGTTCTGCTCCCCACTCGCTGCTTTGCTTTTGCTCTTTCTGGTTT-CCTTTCTCCGCAGTTGATGACAC s panTro4.chr3_GL389630_random 72159 723 + 103936 aagaatgttccaaatagttcaggggatatctttaaactaaaacaattatttgtggttaatctgaaatttaaactgggctgcttgtattttcatttgctaaattggacagccctaCTTTC-------------attattattattattattattgagaccgagtctcactctgtcacccaggctggagtgcagtggtgccatctcggctcactgcaagctccgcctcctggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtgtgcgccaccacgcccagctaatttgttatatttttggtagaaacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgacttgcctgcctcggcctcccaaagtgctgggattataggtgtgagccaccacacctggGCCAGACAGCCCTACTTTTAATGCATCCTCTCCCACGAGGGTCCCTGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCAGGGGTAGCAAGCTCCCAACCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCAAACACAGACTCTGTCCTCCCGCTCCCTCCATTGCTTA------------------GTGTCCGAAGGTTGACGGGGGAGGAGGGACCTTGGGTTCGGGGCGGTTCTGCTCCCCACTCGCTGCTTTGCTTTTGCTGTTTCTGGTTT-CCCTTCTCCGCAGTTGATGACAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846225 724 + 123690457 aagaatgttccagatagttcatgagatatctttaaactaaaacaattatttgtggttaatctgaaatttaagcttggcttcttgtattttcatttgctaaattggacagccctaCTTTttattattattgttattattattattattattattaagaccgagtctcgctctgtcgcccaggctggagtgcagtggtgccatctcagctcactgcaagctccgcctcccggtttcaagggattctcctgtctcagcctcccaagtagctgggattacaggtatgtgccaccacgcccagctaattttttatatttttggtagaaacggggtttcaccatgttggtcaggctggtcttgaactcctggcctcaggtgacctgcctgcctcggcctcccaaagtgctgggattataggtgtgagccaccgcacctggccCAGACAGCCCTACTTTTAAGGCATCCTCTCCCACCAGAGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCAGGGGTAGCAAGCTCCCAGCCTTCTCCCAGGTATTGGGCCTCTCCTCTGCCTCGGGAGGGGCTGTCCATCACACACAGACTCTGTCTTCCCGCTCCCTCCATTGGTTA------------------GTGTCCGAAGATGGACGGGGGAGGAGGGCCCTTGGGTTTGGGGCGGTTCTGCTCCCCACTCGCCGCTTTGCTTTTGCT-------------CTTTCGCCGCAGCTGATGACAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 18840 725 + 111706 aagaatgttccaaatagttcatgggatgtctttacactaaaacaattatttgtggttaatctgaaatttaagctgagcttcctacattttcatttgctaaatcggacagccctaCtttt----------attatttttgtttgtattttatttgagaccgagtctcgctctgtctcccaggctggagcgcagtggtgccaactgggctcattgcaaccatcacctcctgggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccaagcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcggcctcccaaagtgctgggattataggcgtaagccaccgcacctggccCAGACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATCAAGCTCTCAACCTCCCCCCACGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCTCCCTCCATTGCTCA------------------GCGTCGGAAG-TGGACGCGGGAGGACGGACCTTGGGTTTGGGGCAGCTCTGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCCAATCTCCACAGTTGATGACAC i rheMac3.chrUn_JH291127 I 184 C 0 s macFas5.chr2 54210 725 + 192460366 aagaatgttccaaatagttcatgggatgtctttacactaaaacaattatttgtggttaatctgaaatttaagctgagcttcctacattttcatttgctaaatcggacagccctaCtttt----------attatttttgtttgtattttatttgagacggagtctcgctctgtctcccaggctggagcgcagtggtgccaactgggctcattgcaaccatcacctcctgggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccaagcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcacctggccCAGACAGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATCAAGCTCTCAACCTCTCCCCACGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCTCCCTCCATTGCTCA------------------GCGTCGGAAG-TGGACGGGGGAGGACGGACCTTGGGTTTGGGGCAGCTCTGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCCAATCTCCACAGTTGATGACAC i macFas5.chr2 I 183 C 0 s papAnu2.chr2 50512 725 - 187378091 aagaatGTTCCAAATAGTTCATGGGATATCTTTAAACTAAAACAATTATTTGTGGTTAATCTGAAATTTAAGCTGAGCTTCCTACATTTTCATTTGCTGAATCGGACAGCCctactttt----------attacttttgtttttattttatttgagactgagtctcgctctgtctcccaggctggagtgcagtggtgccaactcggctcattgcaaccatcgcctcccaggttcaagggagtctcctgtctcagcctcccaagtagctgggattacaggtgtgtgccaccaggcccagctaattttttatatttttgatagagacagggtttcaccatgttggtcaggctggtcttgaactcctgatctctggtgatccgcctgcctcggcctcccaaagtgctgggattataggcgtgagccaccgcacctggcccagacaGCCCTACTTTTAATGCATCGCCTCCCACCAGGGTCCCcgcctcctctcttccctccaaTCTGCGGGTCTCCTTCA-GCGTATCAAGCTCTCAACCTTCCCCCAGGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTCTGTCTTCCCGCTTCCGCCATTGCTCA------------------GTGTCGGAAG-TGGACGGGGGAGGACGGACCTTGGGTTTGGGGCAGCTCTGCTCCCCACTCACCACTTTGCTTTTGCTCTTTCCGGTTTCCCAATCTCCACAGCTGATGACAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 401708 723 - 91754291 aagaatgttccaaatagttcatgggatatctttaaactaaaacgattatttgtggttaatctgaaatttaagctgagcttcccatattttcatttgctaaatcggacagccctaCtttt----------attatttttgtttttattttatttgagactgagtctcgctctgttgcccaggctggagtgcagtggtgccaacttggctcattgcaaccatagcctccgaggttcaagggagtctcctgtctcagcctcccgagtagctgggattacaggtgtgtgccaccacgcccagctaattttttatatttttggtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctctggtgatccgcctgcctcagcctcccaaagtgctgggattataggcgtgagccaccgcacctggccCAGACAGCCCTACTTTTAATGCACCGCCTCCCACCAGGGTCCCCGCCTCCTCTCTTCCCTCCAATCTGCGGGTCTCCTTCA-GCGTATCACGCTCTCAACCTCCCCCCAGGCATCAGGCCTCTCCTCTGCCTCGGGAGGAGCTGTCCATCACACACAGACTC--TCTTCTCGCTCTCTCCATTGCTCA------------------GTGTCGGAAG-TGGACGGGGGAGGACGGACCTTGGGTTTGGGGCAGCTCTGCTCCCCACTCGCCACTTTGCTTTTGCTCTTTCCGGTTTCCCAATCTCCACAGTTGATGACAC i chlSab2.chr15 C 0 I 524 s calJac3.chr17 918694 726 - 74750902 aggaacgtccgaaatggttcatgggatgtctttatactaaaccagttatttgtggttaatctgaaatttaagctg-gcctcctgtattttcatttgctgaatcagacagccttaCtttt----------attagtttatttttt------tttaagccggagtctcactctgtcgcccaggctggagtgtagtggcaccatcttggctcactgcaacctctgcctcccaggttcaagggaccctcctgactcaacctcctgagtagctgggactacaggcgtgcgtcaccacccctggctagttttttatatttttggtagagatggggtttcatcgtgctggtcaggctggtctcaaactcctgacttcaggtgatccacctgcctcggtctcccaaagtgctgggattataggcgtgagccaccatgcctggccTAGAAAGCCCAACTTTTCATGTATCCTCTCCCACCAGGCTCCCCACCTCCTCTTTTCTCTCCAATCTGCAGGGCTCCTTCAGCGGTAGCAAGCCCCCATCATTCTCCCAGGCACTGCATCTCTTGTCTGCTTCGGGAGA-----------ACACACGAACTCCGTCCTCCTGCTTCCTCCATTGCACAGTGGCAGCAGGGGAAGCTGTGTCTGAAGATGGACGGGGGAGGAGGGACCTTGGGTTTGGGGCGGGCCTGCTTCCCGTTTGCCACTTTGCTTTTGCTCTTCCTGGTTT-TCCTTCCCCACAGTTGATGGCGC i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1638.000000 s hg38.chr3_KI270935v1_alt 110353 3 + 197351 AGG s panTro4.chr3_GL389630_random 72882 3 + 103936 AGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846949 3 + 123690457 ACG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 19565 3 + 111706 GCG i rheMac3.chrUn_JH291127 C 0 I 697 s macFas5.chr2 54935 3 + 192460366 GCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 51237 3 - 187378091 GCG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 919420 3 - 74750902 ACA i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e chlSab2.chr15 402431 524 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=2100.000000 s hg38.chr3_KI270935v1_alt 110356 1 + 197351 G s panTro4.chr3_GL389630_random 72885 1 + 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846952 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 20265 1 + 111706 G i rheMac3.chrUn_JH291127 I 697 C 0 s macFas5.chr2 54938 1 + 192460366 G i macFas5.chr2 C 0 I 628 s papAnu2.chr2 51240 1 - 187378091 G i papAnu2.chr2 C 0 C 0 s calJac3.chr17 919423 1 - 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e chlSab2.chr15 402431 524 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=31770.000000 s hg38.chr3_KI270935v1_alt 110357 32 + 197351 CACCCACAGCGCTCACGTGCCT-----TCCATGGTGG s panTro4.chr3_GL389630_random 72886 32 + 103936 CACCCACAGCGCTCACATGCCT-----TCCATGGTGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120846953 32 + 123690457 CGCCCACAGCGCTCACATGCCT-----TCCATGGTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 20266 30 + 111706 CGCCCACAGCGCTCCCACGTCT-----TCCATGGC-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 55567 30 + 192460366 CGCCCACAGCGCTCCCACGTCT-----TCCATGGC-- i macFas5.chr2 I 628 C 0 s papAnu2.chr2 51241 30 - 187378091 CCCCCACAGCGCTCCCACGTCT-----TCCATGGC-- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 919424 32 - 74750902 TGCCTACAGCAGTCGTATATCTAACTGCGCAT----- i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e chlSab2.chr15 402431 524 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1743932.000000 s hg38.chr3_KI270935v1_alt 110389 826 + 197351 GGGTGAATCCTTTGCCAATAGTGCCTGGTGGGTTTCAGGTAAGTTGTAACTTTTGGACCTTCTGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCATGGAATTGGGATTCTGGCAGCCAGGTGAGGGCGGTCTCACCAGCTCCTTCATGCCTGCAGGCCTCCCCCTTCCTCACAACTGATGGATGGTTGGCTCCCTAGCCGCCCCGTTAGTGCCATGTGTGCTTAATTCTTTTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttgc--tttttagagcagttttgggtttacagcaaaattttcctgagtggaaaatacagaaagttcccatatgccccctgccacacacacatatacctacgcccagcctcccccaccaccaacgccctgcac--caggtgg--cacgtgtgacagtcgatgcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttttggcgttggatattctccattctctattcaacaacgtatcggctggcccggcgcagtggctcatgcctgtaatctcagcactttgggaggtggaggcgggtggatctctttgaga-tcaggagttcgagaccagcctggccaacacggcgaaaacccatctctactaaaaatacaaaaattagccgggtgtggtggcgcatgcctgtagtcttagctacatggaag--------------------gctgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagcagagatcgcaccactgcactccattctgggcgacagagtgagactcaatctcaaaaaataa s panTro4.chr3_GL389630_random 72918 825 + 103936 GGGTGAATCCTTTACCAGTAGTGCCTGGTGGGTTTCAGGTGAGTTGTAACTTTTGGACCGTCTGCTGTCTCTGACTTTGAGTCACATGACAAGGTCCTCATGGAACTGGGATTCTGGCAGCCAGGTGAGGGCGGTCTCACCAGCTCCTTCGTGCCTGCAGGCCTCCCCCTTCCTCACAACTGATGGATGGTTGGCTCCCTAGCCGCCCCCTTAGTGCCATGTGTGCTTAATTCttttaaaaatttaaatatattaattttaaaaatCATCttttaaataataaaatttgc--tttttagagcagttttgcgtttacagcaaaattgtcctgagtggaaaatacagaaagttcccatatgccccctgccacacacacatatacctacgcccagcctcccccaccaccagcgccctgcac--caggtgg--cacgtgtgacagtcgaggcgtccacgtcaacatatcctca----tcaaagtccagagttgacagcacatttctggcgttggatattctCCATTCTCTATTCAACAATGTATCGGCTggccaggcacagtggctcatgcctgtaatctcagcactttgggaggtggaggcgggtggatctc-ttgaga-tcaggagttctagaccagcctggccaacac-gcgaaaacccatctctactaaaaatacaaaaattacccgggtgtggtggcgcatgcctgtagtcttagctacttggaag--------------------gctgaggcaggagaatcgcttgagcctgggaggcagaggttgcattgagtcaaaatcacaccactgcactccattctgggggacagagtgagactccatctcaaaaaataa i panTro4.chr3_GL389630_random C 0 I 4279 s nomLeu3.chr11 120846985 823 + 123690457 CGGTGAATCCTTTGCCAATAGTGCCTGGTGGGTTTCAGGTAAGTTGTAACTTTTGTACCTTCTGCTGTCTCTGAC--TGAGTCACATGACAAAGTCCTCATGGAATTGGGATCCTGGCGGCCAGGTGAGGGCGGTCGCACCAGCTCCTTCGTGCCTGC-GGCCTCCCCCTTCCTCACAACTGATGGACGGTGGGCTCCCTAGCCGCCCCCTTAGTGCCATATGTGCTTAATTCTTTTCAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac--gtcttagagcagttttgggtttacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacgcatatacctacgcccagcctcccccaccacgaacgccctgcac--caggtggcacacgtgtgacagtcgatgcgtccacgtcaacatatcctca----tcaaagtccagagtcgacagcgcatttttggcactggatattctccattctctattcaacaatgtatcggctggccgggtgcagtggctcatgcctgtaatcccagcactttgggaggtcgaggcgggtggatctc-ttgaga-tcaggagttctagaccagcctggccaacatggcgaaaacccatctctactaaaaatacaaaaattagccgggcatgatggcgcacacgtgtagtctcagctacgtggaag--------------------gctgaggcaggacagtcgcttgaacccaggaggcggaggttgcagtgagtcaagattgcaccactgcactccatcctgggcgacagagtgagactc-gtctcaaaaaataa i nomLeu3.chr11 C 0 I 5 s rheMac3.chrUn_JH291127 20296 842 + 111706 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTTTCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGACGAAGTCCTCACGGAAGTGGGATTCTGGCGGCCAGGTGAGGGCTGTCTCATCAGTTCCTTCGTGCCTGCTGGCCTTCCACTTCCTCACAACTGACGGACGGTTGACTCCCTAGCCACCCCCTCAGTACAATGTGTGCTTAATTCttttaaaaatttaaatatattaatttt-aaaatCATCttttaaataataaaatttac--tttttaaagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca---cggggggcacatgtgtgacagtccatgcgtccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctggtcgggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggcgaaa-cccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtctcagctacttggaagactgaggagctggttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcataccactgcactccatcctgggcgatagagcgagactgcatctcaaaaaataa i rheMac3.chrUn_JH291127 C 0 I 5 s macFas5.chr2 55597 843 + 192460366 GGGTGAATCCTTTGCCAATAGTCCCTGGTGTGTTTCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGACGAAGTCCTCACGGAAGTGGGATTCTGGCGGCCAGGTGAGGGCTGTCTCATCAGTTCCTTCGTGCCTGCTGGCCTCCCCCTTCCTCACAACTGACGGACGGTTGACTCCCTAGCCACCCCCTCAGTACAATGTGTGCTTAATTCTTTTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac--tttttaaagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctgccacacacacatatccatacgcccagcttcccccaccatcaacaccctgca---cggggggcacatgtgtgacagtccatgcgtccacgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgttggacatt---cattctctattcaacaatgtatcggctgttcgggcgcggtggttcatgcctgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcataccactgcactccatcctgggcgatagagcgagactgcatctcaaaaaataa i macFas5.chr2 C 0 I 5 s papAnu2.chr2 51271 843 - 187378091 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTTTCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGGCTCCGACTCTGAGTCACATGAGGAAGTCCTCAGGGAATTGCGATTCTGGCGGCCAGGTGAGGGCTGTCTCATCAGttccttcctgcctgctggcCTCCCCCTTCCTCGCAACTGACGGACGGTTGACTCCCTAGCCACCCCCTCAGTACAATGTGtgcttaattcttttaaaaatttaaatatattaatttt-aaaatcatcttttaaataatacaatttac--tttttagagcagtttgaggttcacagcaaaattttcctaagtggaaaatacagaaagttcccatataccccctgccacacacacatatccatatGCCCAGCTTCCCCCACCATCAACACCCTGCA---gggggggCACATGTGTGACAGTCCATGCGTCCACATCAGCATATCCTCA----TCAAAGTCCAGAGTTTACAGTTCATTTTTGGCGTTGGACATT---CATTCTCTATTCAACAATGTATCGGCTGGTCAGgcgcgatggttcatgcctgtaatcccagcagtttgggaggccaaggcaggtggatctc-ttgggg-tcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctggatgtggtgacgcacacctgtagtctcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccatcctaggcgatagagcgagactccatctcaaaaaataa i papAnu2.chr2 C 0 I 5 s chlSab2.chr15 402955 825 - 91754291 GGGTGAATCCTTTGCCAATAGTCCCTGGTGGGTTTCGGGTGAGTCGTAGCTTTTGGGCCTTCTGCTGTCTCCGACTCTGAGTCACATGACGAAGTCCTCACGGAATTGGGATTCTGGCGGCCAG------------------GTTCCTTCGTGCCTGCTGGCCTCCCCCTTCCTCGCAACTGACGGACAGTTGACTCCCTAGCCGCCCCCTCAGTACGATGTGTGCTTAATTCTTTTAAAAATTTAAATATATTAATTTT-AAAATCATCttttaaataataaaatttac--tttttagagcagttttaggttcacagcaaaattttcctgagtggaaaatacagaaagttcccatataccccctg-cacacacgcatatccatatgcccagcctcccccaccatcaacaccctgca---cggggggcacgtgtgtgacagtccatgagtctgtgtcagcatatcctca----tcaaagtccagagtttacagttcatttttggcgctggacatt---cattctctattcaacaatgtatcggctggtcaggcgcggtggttcatgcttgtaatcccagcagtttgggaggccgaggcaggtggatctc-ttggggatcaggagttcaagaccagcctggtcaacatggcgaaaccccatctctactaaaaatacaaaaattagctgggtgtgatgacgcacacctgtagtatcagctacttggaagactgaggagctagttggaaagctgaggcaggagaatcgcttgagcctgggaggcagaggttgcagtgagtcgagatcacaccactgcactccatcctcggcgatagagtgagactccatctcaaaaaataa i chlSab2.chr15 I 524 I 5 s calJac3.chr17 919456 808 - 74750902 GGGTGAGTCCTT---------------GGGGGTATCGGATGAATTGTCACGTTTGGACCTTCTGCTGTCTCTGACCTTGAGTCACACGTCAAAGCCCTCATGGACTTGGGATTCTGCTGGCCAGGTGAGGGCAGTCTCACCAGCTCC-ACGTGCCTACGGGCCT--CTCTTCCTCGCAACTGACGGGTGCTTGGCTCCCAAGCTGCCCCCTTAGTGCCATGTGTGCTTTATTCttttaaaaatttaagtatattaattta-aaaatCATCttttaaacaataaaatttactttttttagagcagttttaggttcacagcaaaattttccagagtgggagatacagaaagttcccatataccccctgccacacac-catctgcgcacgcacagcctcccccaccatcaacatcctgcgccagagggggtacatttgtgacagccgatgcatccacagcaacctatcctcatcactcaaggtccagcgtctacagttcacttttggcgtcgga-------cattctccattcaacagtgtatctgctggccgggcgcggtggctcatgcctgtaatcccagcaatttgggaggttgaggtaggcagatctc-ttgagg-tcaggagttcaaga-aaacctgggcaacatggtaaaaccctgactctactaaaaatacaaaaattggctgagcatggtgtcgcgcgcctataatcccagctacttgggag--------------------gctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgaaccaaggtcatgccgctgcactccagcctgggtgacagagcgaggctccgtctcaaaaaataa i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=854003.000000 s hg38.chr3_KI270935v1_alt 111215 518 + 197351 -------------cataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctgtgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccatagttttaccttttccagaatgtcatataattgcaaccgtaaggtaaatagccttttcagattgtcttctttcacatagt-atatgcatttaa-------gttttctgtatgtattttcatggctgtgtaattcatttcattttagcactgaataatattccatcgtctgaatgcaccataggttatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatgaataaagctgctataaattatgaataaagctgctataaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaatatcaaggagtgtgattgctggactgcatagtaagagtatggttt-agtttggtaagaaagtgcc s nomLeu3.chr11 120847813 518 + 123690457 -------------cataaatgtttctgccattgtagcatcatacagaaaaattagtagcttcagtgccctaaaaatcctctgtgcttcacttattcatccccaacccctggcaaccactgatcttttcactgtctccatagttttaccttttccagaatgtcatataattgcagtcataaggtaaatagccttttcagattgtcttctttcacacagt-atatgcattgaa-------gttttctgtatgtattttcatggctgtgtagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccgttcacctgctgaaggacatcttggttgcttccaagttttggcaattatgaataaagctgctataaattatgaataaagctgctataaacctccatgtgcaggttttcgtgtggacaaaaacgttttctgtccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggttt-agtttggtaagaaactgcc i nomLeu3.chr11 I 5 C 0 s rheMac3.chrUn_JH291127 21143 496 + 111706 -------------aataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctgtgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccgtttccagaataccatataattgcaatcatgaggtaagtagccttttcagattctcttctttcacatagt-atatgcatttaa-------gttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccattcacctgctgaagggcatcttgattgcttccaagttttggc----------------------aattatgaataaagctgctataaatctccatgtgcaggttttcgtgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggttt-ggtttggtaagaaactgcc i rheMac3.chrUn_JH291127 I 5 C 0 s macFas5.chr2 56445 518 + 192460366 -------------aataaatgtttctgccattgtagcatcatacagaaaaataagtagtttcagtgccctaaaaatcctctgtgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccgtttccagaataccatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaa-------gttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccattcacctgctgaagggcatcttgattgcttccaagttttggcaattatgaataaagctgctataaattatgaataaagctgctataaatctccatgtgcaggttttcgtgtggacaaaaacattttccatccctttgggtaaataccaaggagtgtgattgctggactgcatagtaagagtatggttt-ggtttggtaagaaactgcc i macFas5.chr2 I 5 C 0 s papAnu2.chr2 52119 525 - 187378091 -------------aataaatgtttctgccattgtagcatcatacagaaaaataaatagtttcggtgccctaaaaatcctctgtgcttcaCTTATTCATCCCTAAcgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattGCAATCATGAGGTaagtagccttttcagattgtctTCTTTCACATAgt-atatgcatttaagttttctgttttctgtatgtattttcATAGCTGTATAGTTCATTTcattttagcactgaataatattccatcatctGAATGTACCATAGATTGTTTACccattcacctgctgaaggacatcttgattgcttccaagttttggcaattatgaataaagctgctataaattatgaataaagctactataaatcTCCATGTGCAGGTTTTCATGTGGACAAAAACATTTTCCAtccctttgggtaaataccaaggagtgtgattgctggactGCATAGTAAGAGTATGGTTT-GGTTtggtaagaaactgcc i papAnu2.chr2 I 5 C 0 s chlSab2.chr15 403785 518 - 91754291 -------------aaaaaatgtttctgccattgtagaatcatacagaaacataagtagtttcagtgccctaaaaatcctctgtgcttcacttattcatccctaacgcctggcaaccactgatctttttactgtctccataattttaccttttccagaatatcatataattgcaatcatgaggtaagtagccttttcagattgtcttctttcacatagt-atatgcatttaa-------gttttctgtatgtattttcatagctgtatagttcatttcattttagcactgaataatattccatcgtctgaatgtaccatagattatttacccactcacctgctgaagggcatcttgattgcttccaagttttggcaattatgaataaagctgctataaattgtgaataaagctgctataaatctccgtgtgcaggttttcatgtggacaaaaacattttccatccctttgggtaaataccaaggagtatgattgctggactgcatagtaagagtatgcttt-ggtttggtaagaaactgcc i chlSab2.chr15 I 5 C 0 s calJac3.chr17 920264 497 - 74750902 aacaaaacaaaataaaatatgtttctgccattgtagcatcatatagaaaaacaagtattttcagtgccctaaacctcctctgtgctccacctgttcagccctaagccctggcaaccacggatctttttactgtctccataattttgccctttccagaacgtcatgtgatgggaatcataaggtaagtagccttttcagattgccttctttcacatggcaacatgcattgca-------gttttctgtatggctttttgtggctgtatagtt--tgtcattttagcgctgaacactattccgtcgtctgagtgttccgtacg------------tcccctgctgaaggacatcgtggttgcttccaagttttggc----------------------aattatgaataaggctgctataaacatccacgtacaggtttttgtgtggacaaaaaagttttccgtccctttgggtaaatacccccgagtgtgattgctagactgggtagtaagagaatggtttcatttttgtaagaaactgcc i calJac3.chr17 C 0 I 3482 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=1144855.000000 s hg38.chr3_KI270935v1_alt 111733 990 + 197351 aaattgcgggcgcctgtggtcccagctgctgaggaggctgaggcaggagaatcgcgtgaacccgggaggcggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcc--agactccatctccaaaaaaaaaaaaaaaaaagaaactgccaaattgtcttccaaagtggttgtaccatgttgccttcccaccagcaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttgatcattctt------------tttttctttttcttttgagacggggtctcactccattgctcaggctggagtgaaggctggatcgcggctcactgcagcctcaacctcctgggctcaagcaatcctgccatctcagcctccagagtagctgggaccacagtcacatgctaccgtgcccatataattttttaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatcctcctgcttcagcctcccaaagtgctgggagtacaggtgtgagccacagtgcctggtgactgtggtcattctaacaggtgtgtattgAGTACAGTTGTGAGCCACGATGCCTGGCgattgtggtcattctaacgggtgtgcatgggtttcgcgttgtttgcggttccctaatgacatacgatgttgaacatctttgtagatgcttatgtgccatgtgaatgtcttctttgg---tgatatgtatgttcagtttttttacccatttaaaaaactgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaattaa---tattttttgagacagagtctcactctgttgcccaggctggagtgcagtggcgcgatctcagttcactgcaatctccgcctcctgggttcaagtgattatcctgcctcagcctcccgagtagctgggattac s nomLeu3.chr11 120848331 984 + 123690457 aaattgcgggcacctgtggtcccagctactcaggaggctgaggcaggagaatcgtgtgaacttgagaggcggagcttgcagtgagccaagattgtgccactacactccagcctgggcgacaaaagcggagactccatctccaaaaaaaagaaaaaaac--aaactgccaaattgtcttccagagtggttgtaccatgctgccttcccaccagcaatgaaggagggttcctgtttgctccacatcccggacagcgtttgaagttttcagtgctgtggatttggatcattctt------------tttttctttttcttttgagacagggtctcactctgttgctcaggctggagtgcaggctggatcatggttcactgcagcctcaacc-cctgggctcaagccatcctctcacctcagcctccagagtagctgggaccacagtcacgtgccaccgtgcccatacaatttttaaattttttgtagagatgggatcttgctttgttgcccaggctggtctcaaactcctgggctccagtgatccgcctgcttcagcctcccaaagtgctgggagcacaggtgtgagccacagtgcctggcgattgtggtcattgtaacgggtgtgtattgagcacagctgtgagctacggtgcctggcgattgtggtcattgtaacaggtgtgtattggtttcacgttgtttgcagttccctaatgacatacgatgttgaatatctttgtagatgcttatgtgccatgtgaatatcttctttggtgatgatatgtatgttcagtttt------------aaaaactgggttattcattttcttattgttgagttgtaagagttatttgtatatttcgttaattaattaatgttattttttgagacagactctcactctgttgcccaggctggcatgcagtgatgtgatctcagctcactgcaacctccacctcccggattcaagtgattatcctgcctcagcctcctgagtagctgggattac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 21639 936 + 111706 aaattgcgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagggtg--aaactccgtct-caagaaaaataaaaaaat--aaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccggtaatgaaggagagttcttg-ttgctccacatcctgaacagcatttgaagttttcaatgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctccagcatcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtatt----------------------------------------------------------ggttgtgcgatgtttgcagttccctaaggacat--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcagtttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctcccgcgcagaggtgaaatctcagttcactgcaatctccgcctcccgggttcaagcgattctcctgcctcggccttccgagtagctgggattac i rheMac3.chrUn_JH291127 C 0 I 7 s macFas5.chr2 56963 936 + 192460366 aaattgcgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagggtg--aaactccgtct-caagaaaaataaaaaaat--aaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcttg-ttgctccacatcctgaacagcatttgaagttttcaatgctgtggattttggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccagagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgtggtcattctaacaggtgtgtatt----------------------------------------------------------ggttgtgcgatgtttgcagttccctaaggacat--gatgttgaacgtctttttagatgcttatgtgccatatgaataccttctttgg---tgatatgtatgttcagtttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccgggttcaagcgattctcctgcctcggccttccgagtagctgggattac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 52644 936 - 187378091 aaattgcgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggaggcagggcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtg--aaactccgtct-caagaaaaataaaaaaat--aaactaccgaattgtcttccaaagtggttgtccCATGTTGCCTTCCCACCAGTAATGAAGGAgggttcctg-ttgctccacatcctgaACAGCATTTGAAGTTTTCAGTGCTGTGGATTTtggtcattctt------tttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtacaggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctctggagtagctgggaccacagtcacctGCTACCAtgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaatTGTggtcattctaacaggtgtgtatT----------------------------------------------------------GGTTGTGCGATGTTTGCAGTTCCTTAATGACAT--GATGTTGAACGCCTTTTTAGATGCTTATGTGCCATGTGAATACCTTCTTTGG---TGATATGTATGTTCAGtttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcaggggtgcaatctcagttcactgcaatctccgcctcccggattcaagcgattctcctgcctcggccttctgagtagctgggattac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 404303 937 - 91754291 aaattgtgggcacctgtagttccagctactcgggagactgaggcaggagaatcgcgtgaacccaggagccagagcttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagtg--aaactccgtct-caagaaaaataaaaaaat--aaactaccgaattgtcttccaaagtggttgtaccatgttgccttcccaccagtaatgaaggagggttcctg-ttgctccacatcctgaacagcatttgaagttttcagtgctgtggattttggtcaTTCTTtttttctttttctttttctttttcttttgagacagggtctcactgtgttgctcaggctggggtataggctggatcatgcctcactgcagcctcaacctcctgggctcaagcaatcctcccacctcagcctccggagtagctgggaccacagtcacctgctaccatgctcatataattttttaatattttgtagagatgggatcttgctttgttgcccagactggtctcaaactcctgggctcaagtcatcctcctgcttcagtctcccaaagtgctgggagtacaggtgtgagccacaatgcctggcaattgcggtcattctaacaggtgtgtatt----------------------------------------------------------ggttgtgcgatgtttgcagttcccta-----at--gatgttgaacgtctttttagatgcttatgtgccatgtgaataccttctttgg---tgatatgtatgttcaggttttttacccatttaaaaaattgggttgttcattttcttattgttgagttgtaagagttatttgtatatttaattaattaaatattattattttttgagacagaatctcactcttttgcctaggctgacgtgcagtggtgcaatctcagttcactgcaatctccgcctcccaggttcaagcgattctcctgcctcggccttctgagtagctgggattac i chlSab2.chr15 C 0 I 7 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=31.000000 s hg38.chr3_KI270935v1_alt 112723 25 + 197351 tactactggtagtagtaatggcgcc s nomLeu3.chr11 120849315 7 + 123690457 ------------------aggcgtc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 57899 7 + 192460366 ------------------aggcatg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 53580 7 - 187378091 ------------------aggcatg i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 22575 7 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e chlSab2.chr15 405240 7 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=324758.000000 s hg38.chr3_KI270935v1_alt 112748 246 + 197351 cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctccaacgcctgacctcaattgatccgcttacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacccggctctttgtata-ttttagataaaagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgcctttcacagagaagaagttttt s nomLeu3.chr11 120849322 246 + 123690457 cgccaccacacccagctaatttttgtatttttagtagagacagggtttcaacatgttggccaggctggtctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgagatttcaggtctgagccagtgcacctggctctttgtata-ttttagataacagtctttaatcagatgagacttttgcaaatattttcattttcttgccattgcctttcacagagaagaagttttt i nomLeu3.chr11 C 0 I 2287 s rheMac3.chrUn_JH291127 22582 247 + 111706 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtgtgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i rheMac3.chrUn_JH291127 I 7 C 0 s macFas5.chr2 57906 247 + 192460366 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaatgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtgtgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 53587 247 - 187378091 caccaccacacccagctaatttttgtgtttttaatagagacagggtttccccatgttggccaggctgttctcaaacgcctgacctcaagtgatctgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacctggctctttgtgtatttttagatAACAGTCTTTAATCAGATGGGACTTCTGcatatattttcattctcttgccATTGTCTTTCACAGAGAGGTAGTTTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 405247 247 - 91754291 caccaccacacccagctaatttttgtatttttaatagagacagggtttccccatgttggccaggctgttctcaaacgcctgacctcaagtgatccgcctacctcagcctcccaaagtgctgggatttcaggtctgagccagtgcacctggctctttgtgtatttttagataacagtctttaatcagatgggacttttgcaaatattttcattctcttgccattgtctttcacagagaggaagttttt i chlSab2.chr15 I 7 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=273300.000000 s hg38.chr3_KI270935v1_alt 112994 365 + 197351 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttgctattgtatctaaaatgtcatcaccatactcaaggtcatttagattttctcctatattatcttctgggagtcttacagt------tttgcattttattgaggtttatgattcattttgagtttttatgaaaggtataaggtctgtgtctagatttttttttttttttttttttttttttttttttttttgcttgtggatgtccggttgtcccagcgtcatttattgaaaacactatctctgctccattgtgtggcctctgctgctttgtcaaagatcagttgacacatttatacaggtctattagaaatattactttt s rheMac3.chrUn_JH291127 22829 354 + 111706 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtattgtatctaagaagtcatcaccatccccaaggtcatttagattttctcctatgttattttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctatatataaatatattta----------------tttttttgcatgtgaatgtccagttgtcccagtatcgtttgttgtaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtcgattagaaatattactttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 58153 355 + 192460366 aatgttaatgaagttcagctcatcaattatttccttcatggatcatgcccttggtattgtatctaaaaagtcatcaccatccccaaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctatatataaatatattta---------------ttttttttgcatgtgaatgtccagttgtcccagtatcgtttgttgtaaacactatctctgctccattgcatagcctctgctcctttgtcaaagatcagttgacacatttatacaggtcgattagaaatattactttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 53834 328 - 187378091 AATGTTAATGAAGTTCAGCTCATCAATTATTTCCTTCATGGATCATGCCCTTGGTAtcgtatctaaaaagtcatcaccatctCCAAGGTCatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttATGAAAGGTATAAAGTCTgtgtctatatataaatatattta---------------tttcttttgcgtGTGAATGTCCAGTTG---CAGAG------------------------GCTCCATTGCATAGCCtctgctcctttgtcaaagatcagttgacacATTTATACAGGTCTATTAGAAATAttactttt i papAnu2.chr2 C 0 I 1913 s chlSab2.chr15 405494 353 - 91754291 aatgttaatgaagttcagctcatcaattatttcctgcatggatcatgcccttggtatcgtatctaaaaagtcatcaccatctcccaggtcatttagattttctcctatgttatcttcttgg-gtctttcagtttttcattttcattttattgaggtttatgattcattctgagtttttatgaaaggtataaggtctgtgtctatatataaatatattta-----------------ttttttgcgtgtgaatgtccagttgtcccagtatcgtttgttgaaaacactatctctgctccatggcatggcctctgctcctttgtcaaagatcagttgacacatgtatacaggccgattagaaatattactttt i chlSab2.chr15 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120849568 2287 + 123690457 I e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=65514.000000 s hg38.chr3_KI270935v1_alt 113359 120 + 197351 aatattctgggctctctattctgttccattgatctatttgtctattcttttgccagtatcatgctgctttcatgactatagctttagagtaagccttgaagtcaggtggtatcagtcctc s rheMac3.chrUn_JH291127 23183 120 + 111706 aatattctgggctctctattctgtcccattgatctatttgtctattcttttgccagtatcatgcggttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i rheMac3.chrUn_JH291127 C 0 I 461 s macFas5.chr2 58508 120 + 192460366 aatattctgggctctctattctgtcccattgatctatttgtctattcttttgccagtatcatgcggttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 405847 120 - 91754291 aatattctgggctctctgttctgttccattgatctatttgtctattcttttgccagtatcatgcagttttcatgactatagctttagagtaagccttgaagtcaggtgatatcagtcctc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120849568 2287 + 123690457 I e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=2025.000000 s hg38.chr3_KI270935v1_alt 113479 12 + 197351 tgaccattctcc s macFas5.chr2 58628 12 + 192460366 caactgttcgcc i macFas5.chr2 C 0 I 449 s chlSab2.chr15 405967 12 - 91754291 cgactgttctcc i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120849568 2287 + 123690457 I e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=81750.000000 s hg38.chr3_KI270935v1_alt 113491 1047 + 197351 atcaatattgatttggctattttggatcttttgcctctccacataaactttagagccagtttatccatatctacaaataacttcctgggattttgattaagattgtgtcattatgtagaatctgtagatcaagttggctatcttgatctgctgctatcttgataatattgagaactgctatcttaataatattgagtcttctggcctgttgtgctggcgcacacctataatcccagcactttgggatgccgaggagggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgccgaaaccctatctctactaaaaatacaaaaaaaaattagccaggcgtggtggtgtgtgcctgtaatcccagctactcatgaggctgaggcaagagaattgcttgaacccgggaggctgaggttgcagtgagctgagatggtgccactgcactccagcctgggtgacagagggagactccatctcaaaaaaaaaaaaaaaaaa----gagtcttcctgttcataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttacacctcagtatttcattttgggggatgctaatgtaaatggtcatatgtatttaattttattattcatttttc-tttttttgtttcctgtcttgctcaaatatttttaattctaaattccaattgttctttgctggcacacacgaaagctgttgacgttaggacactaaccttatatcatgaaacttgtctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaac-aaagcagttttgtttcttcctttttattctgtataccttttatttcccttttgtgtctagttgcattggccaagacctccagcaggatgttgagaatcgatggtgagaggggacgttcttgccttgttactaatcttaggggaaagcatctaat s chlSab2.chr15 405979 1016 - 91754291 atcaatactgagttggctattttggatcttttgcctctccacataaactttagagccagtttatcaatctctacaaataacttcctgggattttgattaagattgtgttattatgtacaatctgtagatcaagttggctatcttgatctgttgctatcttgataatattgagaactgctatcttaataatactgagtcttctggcctggcgcagtggctcacacctataatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagtttgagatcagcctggccaaaatgttgaaaccctgtctctactaaaaatac--aaaaaaactagctaggcatggtgatgtgtacctgtaatcccagct--------------------------------acctgggaggctgaggttgcagtgagctgagatggcgccattgcactccagcctgggtgacagagggagactccgtctcaaaaataaaataaaataaatttgaatcttcctgtccataaacatagaatgtcatcccatttatgaagttctttgatatctttcatcagagttttatagtttttctcatatagatcttgtacatattttgttacatttatacctcagtatttcattttgggggatgctaatgtaaatggtaatgtgtatttaattttaTTATTAGTTTTTCTTTTTTTTGCTTCCTATCTTGCTCAAAtgtttttaattctaaattccaattgttctttgctggcacacacgaaagccattgacgctgggacactaaccttacatcatgaaacttggctgaaattgcttctttgttctggggttttttccttttgtcaactcttagatttttttacatagatgattgtgtcatctgtgaacaaaaacagttttatttcttcctttttattctgtataccttttatttcccttttgtgtcttgttgcattggccaagacctccagtatgatgttgaaaat---tggtaggaggggacatcctggccttcttcctcatcttaggggaaagcatctagt i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e macFas5.chr2 58640 449 + 192460366 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120849568 2287 + 123690457 I e panTro4.chr3_GL389630_random 73743 4279 + 103936 I a score=14629.000000 s hg38.chr3_KI270935v1_alt 114538 56 + 197351 ttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta s panTro4.chr3_GL389630_random 78022 56 + 103936 ttctcaccgttaaggatgatgttagctgtaggtttttgtagatattcttttattta i panTro4.chr3_GL389630_random I 4279 C 0 s chlSab2.chr15 406995 56 - 91754291 ttctcaccattaaggatgatgttagcagttggtttttgtagatattcttttattta i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e macFas5.chr2 58640 449 + 192460366 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120849568 2287 + 123690457 I a score=128646.000000 s hg38.chr3_KI270935v1_alt 114594 293 + 197351 tttatttatttatttattttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaatctccgcctcctgggttcacaccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccacgcccagctaattttttgtgtttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgaactcgtgatccgcctgcctcggcctcccaaagtgctgggattacagacgtgagccacc s panTro4.chr3_GL389630_random 78078 290 + 103936 tttatttattttttt---ttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgtgatctcggctcactgcaatctccacctcctgggttcacgccattctcctgcctcagcctcccaagcagctgggactacaggcgcccaccaccacgcccagctaattttttgtgtttttagtagagacggggtttcaccgtgttagccaggatagtctcgatctcccgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagccacc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120851855 293 + 123690457 tttcttcttctttttttttcttgagacggagtctcgctctgtcgcccagcctggagtgcagtggcacgatctcagctccctgcaatctccacctcctgggttcacgccattctcctgcctcagcctcccaagtagttgggactacaggtgcccgccaccacgcccagctaattttttgtgtttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgcctcaacctcccaaagtgctgggattacaggcgtaagccacc i nomLeu3.chr11 I 2287 C 0 s chlSab2.chr15 407051 279 - 91754291 ----tttgtctattt--------agacagagtctcactctgtcgcccaggctggaatgcag-ggtgcgttctcagctcactgcaaccttcgcctctcgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggcgctgaccaccatgcctggct-actccttgtatttttaatagagacagggtttcaccatattggccaggctggtcttgaattcctaaccttgtgattcgcccgcctcagccttccaaagtgctgggattataggcatgagccacc i chlSab2.chr15 C 0 I 203 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e macFas5.chr2 58640 449 + 192460366 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=2225.000000 s hg38.chr3_KI270935v1_alt 114887 11 + 197351 atgcctggccg s panTro4.chr3_GL389630_random 78368 11 + 103936 acgcctggccg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852148 11 + 123690457 gtgcccagccg i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29060551 669 + 31377067 I e calJac3.chr17 920761 3482 - 74750902 I e chlSab2.chr15 407330 203 - 91754291 I e macFas5.chr2 58640 449 + 192460366 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=4137.000000 s hg38.chr3_KI270935v1_alt 114898 8 + 197351 atcatgtg s panTro4.chr3_GL389630_random 78379 8 + 103936 atcatgtg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852159 8 + 123690457 atcatgtg i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 29061220 8 + 31377067 atcatatg i canFam3.chr33 I 669 C 0 e rheMac3.chrUn_JH291127 23303 461 + 111706 I e mm10.chr16 65424179 927 - 98207768 I e calJac3.chr17 920761 3482 - 74750902 I e chlSab2.chr15 407330 203 - 91754291 I e macFas5.chr2 58640 449 + 192460366 I e papAnu2.chr2 54162 1913 - 187378091 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=208132.000000 s hg38.chr3_KI270935v1_alt 114906 93 + 197351 atttttcttctctagcctgttgatgtaacggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgttg s panTro4.chr3_GL389630_random 78387 93 + 103936 atttttcttctctagcctgttgatgtaatggattgcattagctgatttttgaatattgaaccagtcttgcatacctgggataaatctctgttg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852167 93 + 123690457 atttttcttctctagcctgttgatgtcacggattgcattagctgatttttgaatagtgaactagtcttgcatacctgggataaatccctgttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 23764 93 + 111706 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctattg i rheMac3.chrUn_JH291127 I 461 C 0 s macFas5.chr2 59089 93 + 192460366 atttttcttctctagcttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctattg i macFas5.chr2 I 449 C 0 s papAnu2.chr2 56075 93 - 187378091 atttttcttctctagctTGTTGATGTAACAGATTACATTAgctgatttttgaatattgaaccagtcttgcatacctgggataaatccctGTTG i papAnu2.chr2 I 1913 C 0 s chlSab2.chr15 407533 93 - 91754291 atttttcttctctagtttgttgatgtaacagattacattagctgatttttgaatattgaaccagtcttgcatacctgggataaatccctgttg i chlSab2.chr15 I 203 C 0 s canFam3.chr33 29061228 92 + 31377067 atttttcttctttattctgttgatgtgatagattgcactaattgattttcgattgttgaatcagccttgca-acctggactaaatgccacttg i canFam3.chr33 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e calJac3.chr17 920761 3482 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=748515.000000 s hg38.chr3_KI270935v1_alt 114999 292 + 197351 gtcatggcctataattctttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagatatattggtctatagtc----gtcttgtaatgtctttgtcccgttttggcattagggtgacagtgac------aaatgacttaggaagtattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcccctta-aatatctgctaaaattcaccagcgaactcatctgtgctgtgtgcttgctTCTTGATAAATGAATGCTGTGACT s panTro4.chr3_GL389630_random 78480 292 + 103936 gtcatggcctataattctttttacatattgttgaactgtatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtc----gtcttgtaatgtctttgtctggttttggcattagggtgacagtgac------aaatgacttaggaaatattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcccctta-aatatttggtaaaattcaccagcgaactcatctgtgctgtgtgcttgctTCTTGATAAATGAATGCTGTGACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852260 292 + 123690457 gtcatggcctataattctttttacatattgttgaactctatttgctaatattttgttggtaatttttgcatctgtg----tgagagatattggtctatagtc----atcttgtaatgtctttgtctggttttggtactagggtgacactgac------aaatgacttaggaagtattcctcctgcttctatcttctggaaaagattgcagaaaataggtattatttcccctta-aatattcggtaaaatgcaccagcgaactcatctgtgctgtgtgcttgcttcttGATAAATGAATGCTGTGACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 23857 296 + 111706 gtgatggcctataattctttttacgtattgttgaactcaatttgctaatatttggttggtaatttttgcatctatg----tgagagatattggtctatagtcagtcgtcttgtaatggttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctgctgcttctgtcttctagaaaagattgcagaaaataggtattattttccctta-aatatttggtaaaattcaccagcgaagtcatctatgctgtgtgcttactTCTTGATAAATGAATGTTGTGACT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 59182 296 + 192460366 gtgatggcctataattctttttacgtattgttgaactcaatttgctaatatttggttggtaatttttgcatctatg----tgagagatattggtctatagtcagtcgtcttgtaatggttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctgctgcttctgtcttctagaaaagattgcagaaaataggtattattttccctta-aatatttggtaaaattcaccagcgaagtcatctatgctgtgtgcttactTCTTGATAAATGAATGTTGTGACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 56168 296 - 187378091 GTGATAGCCTATAATTCTTTTTACGTATTGTTGAactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcAGTCGTCTTGtaatgtttttgtctggttttggcattAGGGTGACACTGAC------AAATGACTTAGGAAGTATTCCTCCTGCTTCTGTCTTCCAGAAAAGATTGCAGAAAATAGATATTATTTCCCCTTA-AATATTTGGTTAAATCCACCAGCGAAGTCATGTATGCTGTGTGCTTACTTCTTGATAAATGAATGCTGTGACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 407626 296 - 91754291 gtgatggcctataattctttttacgtattgttgaactcaatttgctaatattttgttggtaatttttgcatctatg----tgagagatattggtctatagtcagttgtcttgtaatgtttttgtctggttttggtattagggtgacactgac------aaatgacttaggaagtattcctcctgcttctgtcttccagaaaagattatagaaaataggcattatttcccctta-aatatttggtaaaattcaccagctaagtcatctatgttgtgtgcttgctTCTTGATAAATGAATGTTGTGACT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 924243 282 - 74750902 gtcatggcctataattctttttatatattgttgaacttgatttgctaatattt-gttgctaatttttgcatcttcg----tgacagatactggtctatagtc----ttctggtaacgtctttg----gtttcggtattagggtgacactgac------caatgacttagggggtagtc---ctgcttctgtcttctggaaaagattgcacaaaataggtat--tttctcctta-aatattttgcacaattcaccagcgaacccctctgtgttgtgtgcttAATTCTTGAGAAATGAATGCTGTGACT i calJac3.chr17 I 3482 C 0 s canFam3.chr33 29061320 301 + 31377067 ttcatggcatgtaattctttttattcactgttggattttatttgctaatgttttgttgaagatttttgcatctatgttcatgagagatattcctgtagggtt-----tttttttttttttctttctggttttggta-tagggtaacgctggcctcatagactgagttaggaggtattccctctgcttcaatcttctgaaagagattatagagaactgaaagagtctcttcctgcagtgtttggtagaactcaccagtgaatccatttgggctatgtacttAATTCTTGATAAATGAATGCTAGGATT i canFam3.chr33 C 0 I 127 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=365689.000000 s hg38.chr3_KI270935v1_alt 115291 140 + 197351 GCAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTATGTAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTCCATGTA--------AGTTTGGAGTCTGCTCAGATCAAAGA s panTro4.chr3_GL389630_random 78772 140 + 103936 ACAGTTTTGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTCCATGTA--------AGTTTGGAGTCTGCTCAGATCAAAGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852552 140 + 123690457 ACGGTTTTGTATGGAGATTCCATTACATTCCACTTTGGGCCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCTTCACCTATTG--GGAGAAGTCATTCTCCATATA--------AGTTTGGAGTCTGCTCAGATCAAAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 24153 148 + 111706 ATGGTTTCGTATGGAGACTTCATTACATTCTACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCATCACCCATTG--GGAGAAGTCATTCTCCATATAACGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 59478 148 + 192460366 ATGGTTTCGTATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGGCATCACCTATTG--GGAGAAGTCATTCTCCATATAACGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 56464 148 - 187378091 ATGGTTTTGCATGGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGACTTCACCTATTG--GGAGAAGTCATTCTCCATATAACGTAGACAGTTTGGAGTCTGCTCAGATCAaaga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 407922 148 - 91754291 ATGGTTTTGTATAGAGACTTCATTACATTCCACTTTGGGGCATATGAGGGTAAAGCTACAGCTTTGTACATAGGAGAGTGACTTCACCTATTG--GGAGAAGTCATTCTCCATGTAATGTAGACAGTTTGGAGTCTGCTCAGATCAAAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 924525 147 - 74750902 GTGGTTTTGTATGGAGACTTCATTACATTACACTTTGGGGAGTATGGTGGTAGAGCTACGGCTCTGTACATAAGAGGGTGGCTTTGCCCACTG--GGGGAA-TCCTCCTCCAGATAAAGTGGGCAGTTTGGAGTCTGCTCAGATCAAGGA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29061748 127 + 31377067 GTGGTTTTATATGGAGGCTTGATTAC-----ACTTTGGGGTGTTTGAGGGTAAAGTCACAACGTTGCATGTATGGGAGGGGCTTCACCTACTGTTAAGAAAAGCAT------------------AGTTTAGGGTCTGCTCAGGTCAGAGA i canFam3.chr33 I 127 I 13 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1268110.000000 s hg38.chr3_KI270935v1_alt 115431 561 + 197351 Ctgtgaaggttaatattgagtgtcaacttgattggactgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtgttggcaatggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcatagccag-aataaagcaggcagaggaatgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcggacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggttacactgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcactttgtgatcgtgtgagtcgatactccttcataaactcccctttatatatacatctatcctattagtcctgaccctctagggaacc----ctaatacaAAGATtatatata-t s panTro4.chr3_GL389630_random 78912 561 + 103936 Ctgtgaaggttaatattgagcgtcaacttgattggactgaaggatgcaacgtattgttcctgggtgtctctctgtgagggtattggcaacggagactaatatttgaatcagtggactgggagaggcaggctcactctcagtctgggtggacacaatctaatcagctgccagcgtagccag-aataaagcaggcagaggaatgtggaagga-ttacactggctaagtcttccagccttcatctttctcccgtgctggatgcttcctgccctcaaacatcggacttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctcttgggccttctgccacagacttaaggctgcactgtcagtttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacagcctattgtgg-acctcaccttgtgattgtgtgagtcgatactccttcataaactcccctttatatatacctctatcctattagtcctgaccctctagggaacc----ctaatacaAAGATtatatata-t i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120852692 561 + 123690457 Ctgtgaaggttaatattgagcgtcaacttgattggactgaaggatgcaaagtattgttcctgggtgtctctctgtgagggtgttggcaacggagactaatatttgaatcagtggactgggagaggcagactcactctcagtctgggtggacacaatctaatcagctgccagtatagccag-aataaagcaggcagaggaacgtggaagga-ttatactggctaagacttccagccttcatctttctcccatgctggatgcttcctgccctcgaacattggatttccagttcttcagcttttggactcttggacttacactggtggtttgtcaggggctctcgggcctttgaccacagacttaaggctgcactgtcggcttccctacttttgagatcttgggattcagactggcttccctgcttgtcagcttgcagacggcctattgtgg-acctcaccttgtgatcctgtgagtcgatactccttcataaactcccctttatatatacatctatcctattagtcctgaccatctagggaacc----ctaatacaAAGATTTtatata-t i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 24301 565 + 111706 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtcttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagctagaaataaagcaggcagaggaacatggaggga-ttacactggctgagtcttccagccttcatctttcccccgtgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacactggtggtttgccaggggctctcgggccttcggccacagacttgaggctgcattgtcggcttccgtacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgattgtgtaagtcgatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaacacaAAGATCATATGTA-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 59626 565 + 192460366 Ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtcttggcaacggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagctagaaataaagcaggcagaggaacatggaggga-ttacactggctgagtcttccagccttcatctttcccccatgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacactggtggtttgccaggggctctcgggccttcggccacagacttgaggctgcactgtcggcttccgtacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagacggcctattgtgg-acctcaccttgtgattgtgtgagtcgatactccttcataaactcccctttatatatacatctatcctattagtcctgtccctctagggaaccctgactaacacaAAGATCatatgta-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 56612 560 - 187378091 ctgtgatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtGTTGGCAACGGAGACTAATATTTGAaccagtggactgggagaggcagacccactctcAATCTGGGTagacacaatctaatcagctgccagtgtagctag-aataaagcaggcagaggaacacgGAAGGA-TTACactggctgagtcttccagccttcatctttcccccgtgctagatgcttcctgccctcgaacatcggacttcaagttcttcagcttttggactcttggacttacaccagtggtttgccaggggctctcggaCCTTTGGCCACAGACTTAAGGCTGcgctgtcggcttccctacttttgagatcTTGGGATTCAGACTAGCTTCCCTGCctctcagcttgcagacggcctattgtgg-acctcaccttgtgatcgtgtgagtcgaTACTCCTtcataaactcccctttatatatacatctatcctatcagtcctgtccctctagggaacc----ctaaTACAAAgatcatatgta-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 408070 565 - 91754291 Ctgcaatggttaatattgagtgtcaacctgattggactgaaggacacaaagtattgttcctgggtgtatctctgtgagggtgttggcaatggagactaatatttgaatcagtggactgggagaggcagacccactctcaatctgggtagacacaatctaatcagctgccagtgtagctag-aataaagcaggcagaggaacatggaagga-ttacactagctgagtcttccaggcttcatctttcccccgtgctagatgcttcctgccctcgaacatcggatttcaagttcttcagcttttggactctcggacttacaccggtggtttgccaggggctctcaggcctttggccacagacttaaggctgcactgtcggcttccctacttttgagatcttgggattcagactagcttccctgcttctcagcttgcagatggcctattgtgg-acctcaccttgtgatcgtgtgagtcgatactccttcataaactcccctttatatatacatctatcctattagccctgtccctctagggaaccctgactaatacaAAGATCatatgtat- i chlSab2.chr15 C 0 I 55 s calJac3.chr17 924672 553 - 74750902 Ctgtgatggctaatagtgagtgtcaacttgattggactg-aggaggcaaagtgttgctcctgggtgta--tctgtgaggctgttgccaatggaggctaatatttgaatcagt-gactgggagaggcagacccaccctgaatctgggtagccacaatcttatcagttgccagcatacctcg-agtaaggcaggcagaggaacatggaaggagttcctcttgctgagtcttccagcc-tcatcatcctcccaggctgggtgcttcctgccctcaaacatcagactccaggttcttcagctgtgggactcttgcacttacacctgcggtttgccaggggcccttgggccctcggccacagactgaaggctgcactatcggcttccctacttctgaggtcttgggattcagaccggcttccttacttcttagcttgcagacagcctgttgtggaacttcaccatatgatcatgtgagtcaatactccttaataaactccccttcgtatacacat-----ctattagtcctgtccctctggagaacc----ctaatacaAAGGCCGTATATA-T i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29061875 13 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1471.000000 s hg38.chr3_KI270935v1_alt 115992 47 + 197351 attctttatatatata------------tatatatatatat--------------------------------------tttttttttttttttttt s panTro4.chr3_GL389630_random 79473 85 + 103936 attctttatatatata------------tatatatatatatatatatatatatatatatatatatatattttttttttttttttttttttttttttt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120853253 31 + 123690457 a-----tatatatata------------tatatatatataA-------------------------------------------------ttttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 24866 24 + 111706 ----TTTATATATATA------------TACACATACATA--------------------------------------------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 60191 24 + 192460366 ----tttatatatata------------tacacatacata--------------------------------------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 57172 36 - 187378091 ----tttatatatatatatatatgtgtgtatatatatata--------------------------------------------------------- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 925225 17 - 74750902 ---------ATACATA------------TAAAGAGAGA----------------------------------------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29061875 13 + 31377067 I e chlSab2.chr15 408635 55 - 91754291 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=701062.000000 s hg38.chr3_KI270935v1_alt 116039 300 + 197351 tttgagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattataggcgtgtgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgccttggcctcccaaaatgttgggattacaggcgtgagccaccgtgcccaaccAAAG---ATATTCCTTTGG s panTro4.chr3_GL389630_random 79558 300 + 103936 ttagagacagagtcttgctctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattataggcgtctgccaccatgcccagcgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtctcaaactcctggcctcaagtgatctgcccgccttggcctcccaaagtgttgggattacaggcgtgagccactgtgcccaaccAAAG---ATATTCCTTTGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120853284 300 + 123690457 tttgagacagagtcttgctctgtcacccaggctggagtgcagtggcacaatctcagctcactgcaacctccgcctcctgggttcaacagattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccatgcccagtgaatttttgta-ttttagtagagacagggtttcactatgttggccaggctggtttcaaactcctggcctcaagtgatccacccgcctcgacctcccaaagtgttgggattacaggcatgagccgcggtgcccagccAAAG---ATATTCCTTTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 24890 301 + 111706 tttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcctgggttcaagagagtctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccatgcccagctaatttttgtatttttagtagagacagcatttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtaagccactgtgcccaaccAAAG---ATATTCCTTTGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 60215 301 + 192460366 tttgagacagagtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgccaccatgcccagctaatttttgtatttttagtagagacagcatttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtaagccactgtgcccaaccAAAG---ATATTCCTTTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 57208 301 - 187378091 tttgagacagagtcttgctctgtcacccaggctggagtgcagtgacatgatctcagctcactgcaacctctacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgcccccacgcccagctaatttttgtatttttagtagagaccgcgtttcaccatgtcggccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggattacaggcgtgagccactgtgcccaaccaaag---ATATTCCTTTGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 408690 299 - 91754291 tttgagac--agtcttgctctgtcacccaggctggagtgcagtggcatgatctcagctcactgcaacctccacctcctgggttcaagagattctcctgcctcagcctcctgagtagctgggattacaggcacgtgcccccacgcccagctaatttttgtatttttagtagagacagcgtttcaccatgtcagccaagctggtctcaaactcttggcctcaagtgatccgcccgcctcagcctcccaaagtgttgggactacaggcgtgagccactgtgcccaaccAAAG---ATATTCCTTTGG i chlSab2.chr15 I 55 C 0 s calJac3.chr17 925242 300 - 74750902 ---gagagagaggcttgctctgccgcccaggctggagtgcagtggcgtgatcttagctcactgcaacctctacctcccagattcaagagatcctcctgcctctgcctcctgagtagctgggattacaggtgtgcaccaccatgcctggctaatttttgta-ttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctggcctcaagtggtccgcctgccttggccttccaaagtgttggaattacaggcgtgagccaccgcacccAATCAAAGATCATATTTCTTTGG i calJac3.chr17 C 0 C 0 e mm10.chr16 65424179 927 - 98207768 I e canFam3.chr33 29061875 13 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1803472.000000 s hg38.chr3_KI270935v1_alt 116339 677 + 197351 GAGCTTCCTTCAACAGCACTTAcccacccgcaagaatgagcttgaacacctgctttgcaccatgtgacctcctttctgaccccatga-ctacattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcagggatttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAA-TTGTGTTGGAGTTATTACACCAGATAGGTGTAAAAGTCCCGCCTGCT----GAGAGGATTCTGTGGAAGCTGATCAGGTTGCTGGGG-CAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGAGA-GGGTATATGAGGGGTCGGGCCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCGCTCTTCCATGAAACGCAGGCGGTGGGGACAGCCACCAGACAGGTAAACACACTGTGCATTGATCCTTTTACGACTTTTGTGAAACTGATGGACAGGCAGGCAGGGAGGGGTCCTGGGAGAG--AGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCTCTCCTCCTTAGCGGGC s panTro4.chr3_GL389630_random 79858 679 + 103936 GAGCTTCCTTCAACAGCACTTAcccacccgcaagaatgagcttgaacacctgctttgcaccatgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcagggatttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattgtggACCAA-TTGTGTTGGAGTTATTACACCAGATAGGTGTAAAAGTCCCACCTGCT----GAGAGGATTCTGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGAGAAGGGTATATGAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAGACAGGAAAACACACTGTGCATTGATCCTTTTACGACTTTTGTGAAATTGATGGACAGGCAGGCAGGGAGGGGTCCTGGGAGAG--GGTCTGGGGCACTCCATCTTGGGGTAACTCTTTCGCTCTCCTCCTTAGCGGGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120853584 678 + 123690457 GAGCTTCCTTCAACAGCACTTAcccacccacaagaatgagcttgaacacctgctttgcaccatgtgacctcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcagggatttggggtttagaactaagaggcagctacctagtttctgcataaagtt----ggaactgaaattttctagacacaggaattgtggACCAA-TTGCGTTGGAGTTATTACACCAGATATGTGTAAAAGTCCCGCCTCCT----GAGAGGATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGAGGTGAA--------GGGCTGTGGGATGGAGAACCTCAGAGGACTCCATCTGGGGTCCGGGAAAGGACAGAGA-AGGTATATTAGGGCTCGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGCTGGTTCCTGGAAATGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAGACAGGAAAACACACTCTACATTGATCCTTTTACGACTTTTGTGAAATTGATGGACAGGCAGGCAGGGAGGGGTCCTGGGAGAG--AGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCTTTCGTCCTTAGCGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 25191 674 + 111706 GAGCTTCCTTCAACAGCACTTAcccacccgcaagagtgagcttgaacacctgctttgcaccatgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcagggatttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattggggACCAA-TGGTGTTGGAGTTGTTACACCAGATAGGTGTAAAAGTCCTGCCTGCT----GAGAGGATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCAGGAAAGGACAGAGA-AGG--TATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCAGTGGGGACAGCCACCAGACAGGAAAACACACTGTACATTGATCCTTTTATGAC-TTTTTGAAATTGATGGACAGGCAGGTGGGGAGGGGTCCTGGGAGAG--AGTCTGGGTCACTCCATCTTGGGGTATCTCTTTCGCCCTCCTCCTTAGAGGG- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 60516 674 + 192460366 GAGCTTCCTTCAACAGCACTTAcccacccgcaagagtgagcttgaacacctgctttgcaccatgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagattctctcttcagggatttgggatttagaactaagaggcagctacctagtttctgcataaagtt----ggaattgagattttctagacacaggaattggggACCAA-TGGTGTTGGAGTTGTTACACCAGATAGGTGTAAAAGTCCTGCCTGCT----GAGAGGATTATGTGGAAGCTGATCAGGTTGCCGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCAGGAAAGGACAGAGA-AGG--TATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAGACAGGAAAACACACTGTACATTGATCCTTTTATGAC-TTTTTGAAATTGATGGACAGGCAGGTGGGGAGGGGTCCTGGGAGAG--AGTCTGGGTCACTCCATCTTGGGGTATCTCTTTCGCCCTCCTCCTTAGAGGG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 57509 680 - 187378091 GAGCTTCCTTCAACAGCATTTACCCACCCGCAAGAGCGAGCTTGAACACCTGCTTTGCACCATGTGACTTCCTTTCTGACCCCATGA-CTGCATTTTATTGGACCAGGCATAAACAACTGATGTAAATTGGACCAGTCAGATTCTCTTTTCAGGGATTTGGGATTTAGAACTAAGAGGCAGCCACCTAGTTTCTGCATAAAGGTTTGCAGAATTGAGATTTTCTAGACACAGGAATTGGGGACCAA-TGGTGTTGGAGTTGTTACACCAGATAGGTGTAAAAGTCCTGCCTGCT----CAGAGGATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGGGCTGAA--------GGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGAGA-AGGTATATTAGGGATCGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGCTCCTGGAAAGGGAGCTGAAATGGTTTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAGAGAGGAAAACACACTGTACATTGATCCTTTTATGAC-TTTGTGAAATTGATGGACAGGCAGGTGGGGAGGGGTCCTGGGAGAG--AGTCTGGGGCACTCCATCTTGGGGTATCTCTTTTGCCCTCCTCCTTAGAGGG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 408989 688 - 91754291 GAGCTTCCTTCAACAGCGTTTAcccacccgcaagagtgagcttgaacacctgctttgcaccatgtgacttcctttctgaccccatga-ctgcattttattggaccaggcataaacaactgatgtaaattggaccagtcagtttctctcttcagggatttgggatttagaactaagaggcagccacctagtttctgcATAAAGTTTTGCAGAATTGAGATTTTCTAGACACAGGAATTGGGGACCAA-TGGTGTTGGAGTTGTTACAGCAGATAGGTGTAAAAGTCCTGCCTGCT----GAGAGGATTATGTGGAAGCTGATCAGGTTGCTGGGGACAAGTGGAGGCAGGGTAGGGCTGAAGGGCTGTGGGGCTGTGGGATGGAGAACCTCAGAAGACTCCATCTGGGGTCCGGGAAAGGACAGAGA-AGGTATATTAGGGATTGGGTCCTCCAGATCTAAGGGTGGGGT-GGTGGCATGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCTGAAATGGTGTAATCCCTCTTCCATGAAACACAGGCGGTGGGGACAGCCACCAGACAGGAAAACGCACCGTACACTGACCCTTCTATGAC-TTTGTGAAATTGATGGACAGGCAGGTGGGGAGGGGTCCTGGGAGAG--AGTCTGGGGCACTCCATCTTGGGGTATCTCTTTCGCCCTCCTCCTCAGAGGG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 925542 658 - 74750902 GTGCTTCCTTC-ACACCACTTACCCACCCACAAGAGTAAGCTTGAACACTGACTTTGCACCACGTGACCTCCTTTCTCACCCCATGA-TTGCATTTTATTGGACCAGGCATAAACAACTGATGTAAATGGGACCAATCAGATTCTGTCTTCAGGGATTTGGGATTTAGAACTAAGAGGCAGCTACCTAGTTTCTGCATGAAGTT----GGAA-TGAGGTTTT------GCAGGAAGTGTGGACCAA-TTGTGTTGGAGTTGTTACACCAGATAGGTGTAGAAGTCCTGCCTGCT----GAGAGGATCATGCGGGAGCTGATCAGGTTGCTGGGGACTAGTAGAGGCAGGGTAGGGCTGAG--------GGGCTGTGGAATGGAGAACCTCAGAACACTCCATCTGGGGTCCCGGAAAGGACGGAGA-AGGCATATTAGGGATCAGGTCCTCCAGATCTAAGGGTGGGTG-GGTGGCACGTTTCTTGAGTTGGTTCCTGGAAAGGGAGCCAAAATGGTTTAATCCCTCTTCCATGAAAGACAGGC-GTGGGGACAGCCACCAGACAGGAAAAC------TGCATTTATCCTTTTACAAC-TTTGTGAAATTGATAGACAAGCAGGCGGGGAGGGGTCCTGGGAGAGACAGTCTGGGGCACTCCATCTTGGGGTATCTCTG------TCCTCCTTAGAGGGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29061888 633 + 31377067 GAACTTCCTCCAGCaccacttgctcacccacaagagtgagcctgagcaccaggatcatgtcatgtgacctcctttcctaccctatggtccacacttatttggaccagtgatagacaattgacataagctggactaatcatattctcccctcagggagttgggatttaggagcaagaggcagctctctagtttctccatagaggt----ggaattgaggtattctagacctaggagctgtggACCAGTTTTTGTTGGACTAGTTACACCAGATAGGTGT-GACGTTCTTTCTGCTAGGAGAGAAGATGAGGTGGAAACCGATCATGTGGCTGGGAAT------GGGCAGAGAGGGACCAAG--------GGATCATGGGGTGAAGAGACTCAGAAGGCTCCAG-TGGGGCTCAGGAAAGGACAGAGA-GAGTATATTA-GGATTGTGTGCTCCAGGTCTAAGGAGGGGGTGGGTGGCACGCTTCTCAAATTGGTTCTTGGAAAGGGA--------GGTGTAAGCCCTCCTCCAGGGAACACA----GTGGGAGCAA-GAGCAGATAGGTAAAGGCACTGTGTATTTACCCTCTCGGAAC-TGTT------------------------AGAGGGTGCCCGGGTGAG----TCTGGGCTACTCCATGTGGGGGTGTCTCTACTG---TCCTCCTCAGAAGGC i canFam3.chr33 I 13 C 0 e mm10.chr16 65424179 927 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=875065.000000 s hg38.chr3_KI270935v1_alt 117016 369 + 197351 GAAGCTTTGGCC--TGTG----------CTGGGGTGGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAA------GGTTGGGGTGGAGCAACTGAGGGTTTCCAGCATGGGTAACC---G-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTAATGCTCCACTGC-TGCCCAGCACTTAACCTCCACACTCTGTGCCCTCTGATGGTTGGGAGAA--GTCTGTGTCCAGCCCTTCGGCCACCAGAAGAAAATCAAGAATGGAATTCCTGGTTTTGGAGAC-ACAAAAAGTCAGAGAGACTTTATTTAAATAGAG-TTAATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATCACCACAT-TATGAACTCgt----------g s panTro4.chr3_GL389630_random 80537 366 + 103936 GAAGCTTTGGCC--TGTG----------CTGGGGTGGGGGAAGAAGAAGGTGATGTGGAGCATGAAGCAA------GGTTGGGGTGGAGCAACTGAGGGTTTCCAGCATGGGTAACC---G-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTAATGCTCCACTGCCTGCCCAGCACTTAACCTCCACACGCTGTGCCCTCTGATGGTTGGGAGAA--GCCTGTGTCCAGCCCTTCGGCCACGAGAAGAAAATCAGGAATGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTCAGA----CTTTATTTAAATAGAG-TTGATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATCACCACAT-TATGAACTCTT----------T i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854262 364 + 123690457 GAAGCTATGGCC--TGCA----------CTGGGGTAGGG---GAAGAAGGTGATGTGGATTATGAAGCAA------GGTTGGGGTGGAGCAACTGAGGGCTTCCAGCATGGGTGACC---A-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACCGCCTGCCCAGCACTTAACCTCCACACTCGGTGCCCTCTGATGGTTGGGAGAA--GCCTGTGCCCAGCCCTTCAGCCACCAGAAGAAAATCAGGAATGGAATTCCTGGTTTTGAAGAC-ACAAAAAGTCAGAGAGAC----TTTAAATAGAGTTTAATTTGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAGCATTTTG---CTTAACTTAGGGCCATCACCGCAT-TATGGACTCTT----------T i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 25865 370 + 111706 GAAGCTTTGGCC--TGTG----------CTGGGGTGGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAA------GGTTAGGGTGGAGCAACTGAGGATTTCCAGCATGGGTGACC---G-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCC-ACTGCTCCACCGCCTGCCCAACACTTAACCTCCACACACTGTGCCCTCGGATGGTTGGGAGAA--GCCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAATAGAATCTCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATCACTGCAT-TATGAACTCTG--------gtg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 61190 376 + 192460366 GAAGCTTTGGCC--TGTG----------CTGGGGTGGGGGAAGAAGAAGATGATGTGGAGCCTGAAGCAA------GGTTAGGGTGGAGCAACTGAGGATTTCCAGCATGGGTGACC---G-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCC-ACTGCTCCACCGCCTGCCCAACACTTAACCTCCACACACTGTGCCCTCGGATGGTTGGGAGAA--GCCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAATAGAATCTCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATCACTGCAT-TATGAACTCTG--gtgtgtgtg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 58189 373 - 187378091 GAAGCTTTGGCC--tgtg----------ctggggtgggggaagaagaaGATGATGTGGAGCCTGAAGCAA------GGTTAGGGTGGAGCAACTGAGGATTTCCAGCATGGGTGACC---T-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACTGCCTGTCCAACACTTAACCTCCACACACTGTGCCCTCTGACGGTTTGGAGAA--GCCTGTGCCCAGCCCTTCGGCCACCAGAAGAAAATCAGGAATGGAATCCCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTTAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAAATATTTTG---CTTAACTTAGGGCCATCACTGCAT-TATGaactttg------gtgtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 409677 376 - 91754291 GAAGCTTTGGCC--TGTG----------CTGGGGTGGGG---GAAGAAGATGATGTGGAGCCTGAAGCAA------GGTTAGGGTGGAGCAACTGAGGATTTCCAGCATGGGTGACC---G-GGCTGAT-TAGGACTGGAT----CCAGCTGCCCCTACTGCTCCACTGCCTGCCCAACACTTAACCTCCACACACTGTGTCCTCGGACGGTTGGGAGAA--GCCTGTGCCCAGTCCTTTGGCCACCAGAAGAAAATCAGGAATGGAATCCCTGGTTTTGAAGAC-ACAAAAAGTTAGACAG-CTTTA-TTAAATAGACTTTAATTCGAAGTAAACCAGAGAG-TTTTGTGTGCAGAATTATTTTG---CTTAACTTAGGGCCATCACTGCAT-TATGAACTCTAgtgtgtgtgtg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 926200 370 - 74750902 GAAACTTTGGCC--TGTG----------TT-GGGTGGGGGAAGAAGCAGATGATGTGGAGCATGAAGCAA------GGTTGGG--GGAGCAATGGAGGATTTCCAACATGGCTAACC-AAG-GGCTGAC-CAGGGCTGGA-----CCAGCTGCCCCTACTACTCTACCACCTGCCCAACACACCACCTCCACACCCTGCACCCTCT----GTTGGGAGAA--GCCTGTGCCCAGCCCTTTGGCCACCAGAAGAAAATCAGGAATAGAATCCCTGCTTCTGAACACAAAAAAAAGACAGAGGGACTTCATTTAAATAGACTTTAATTAGAAGTAAACCAGAGAA-TTTTATGTGCGGAAGCATTCTG---GTTAACTTAGAGCCATCCCTGCAT-GATGAAATCTG------GCgtg i calJac3.chr17 C 0 I 112 s mm10.chr16 65425106 363 - 98207768 GAAGCACTGGCTGAGGTG----------CAGGGCTGGGTGAGAAAGGAG-------GAAGCAAGGACCAA------GCCAGCGTTGTGGCCACCGATG--CAGCAGCATGGGGCAGCCGGG-AGCTGTCGTAGGGCTGGGCTCCACCATCTGAATTTTCCACCCCCCACCCTCCCTAATATGCAACTGTCACA-ACTATGT-TTATGAGGAATGGAAGAACGTGCTGTGCCTAACACTACAGCCACCAGAAG-AAACCTGGTATGGAATCCATAGTT-TGAAGAC-ATAAAAAGATAGAGA--CTTTATTTAAATAGATTTTAATGAGAAGTAAGCCTG-----TGTTATATGTAAAAACATCTTG---GTAAATGTAAAGCCA--GTCACATCCATTAACTCTG----------G i mm10.chr16 I 927 C 0 s canFam3.chr33 29062521 317 + 31377067 CAGGCTTTGGCT--TGCATTTCTTCCCCCTGGGAAGGG----GAAGAAGGTGACGTGGAGGCGGAAGCAAGGACCCGGGTGGGCTGGAGCAAC--AAGCTTCCCAACA-----GACC---GTGGCTGGT-TCCAAC---------CCACCTCTCCCCTCCGCT-----------------------------------------------------------CCCTGTACCTAGCCTGTCAGCCACACAAGGAAAATCACCAGTGGAATTCACAGCTTTGGAAAC-AC--AAAGTCAGAAGGATTTTACTTAAATAGACTTCAACTAGAAGGAAACTGGAGGGTTTTTTTATACAGATGAATTTTGGCTTTTAACTTGGAGCCATCAGCCCAT-TAGTAACTCTG----------A i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=384656.000000 s hg38.chr3_KI270935v1_alt 117385 168 + 197351 tgtgtgtgtgtgtgtgtgCACGCGCG---------CGTGCACAGGCTAGTGTCCT---TCTG-TGGGTGTGTCTGCGTGAGGACCCATCCA--TGCATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGATAAGGTATAGTCTTGTCTTGATTCCCAGTATTCATTCTCCTT s panTro4.chr3_GL389630_random 80903 168 + 103936 TGTGTGTGTGTGTGTGTGCACGCGCA---------CGTGCACAGGCTAGTGTCCT---TCTG-TGGGTGTGTCTGCGTGAGGACCCATCCA--TGTATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGCGCCTATGGATAAGGTATAGTCTTGTCTTGATTCCCAGTATTCATTCTCCTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854626 158 + 123690457 TGTGTGTGTGTGTGTACGCACGCACG---------CGTGCACAGGCTAGTGTCCT---TCTG-TGGGTGTGTCTGCGTGAGGACCCATCCA--TGCATGTTTGATCTTTATGGCCTCCCCCTG--TGCACCTGTGCCTGTGG----------GTCTTGTCTTGATTCCCAGTATTCATTCTCCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 26235 163 + 111706 tgtgtgtgtgtgtatgtgcgcgcatg---------cgtgCACAGGCCAGTGTCCT---TCTG-TGGGGGTGTCTGCGTGAGGACCCCTCCA--CGC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAGCCTATGGATAAGGCATAGTCTTGTCTTGAGTCCCAGTATTCACTCCCCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 61566 163 + 192460366 tgtgtgtgtgtgtatgtgCGCGCACG---------CGTGCACAGGCCAGTGTCCT---TCTG-TGGGGGTGTCTGCGTGAGGACCCCTCCA--CGC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAGCCTATGGATAAGGCATAGTCTTGTCTTGAGTCCCAGTATTCACTCCCCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 58562 167 - 187378091 tgtgtgtgtgtatgtgtgtgtgcacg---------cgtgcacaGGCCAGTGTCCT---TCTG-TGGGGCCGTCTGCGTGAGGACCCCTCCA--CGCTTGTTTG-TCTTTATGGCCTCCCCCTG--TGCACCTGAGCCTATGAATAAGGTATAGTCTTGTCTTGAGTCCCAGTATTCACTCCCCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410053 163 - 91754291 tgtgtgtgtgtgtatgtgCACGCACG---------CGTGCACAGGCCAGTGTCCT---TCTG-TGGGGGTGTCTGCGTGAGGACCCCTCCA--CGC----TTG-TCATTATGGCCTCCCCCTG--TGCACCTGAACCTATGGATAAGGTATAGTCTTGTCTTGAGTCCCAGTATTCACTCCCCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 926682 170 - 74750902 tgtgtgtatgtgtgcatgtgtgcgtg---------cgtgCACAGGCCAGTGTCCTGTGGCTG-TGGGTGTGTCTGTGTGAGGACCCATCCA--TGC-CACTGGATCCTTATGGCCTCCCCATG--TGTCCCTGCGCCTACCCACAAGGCGTAGTCTTGTCTTGATTCCCGGTATTCATTCTCCTT i calJac3.chr17 I 112 C 0 s mm10.chr16 65425469 164 - 98207768 TGTGTGTGTGTGTGTATGCACACACAGTCTGCATTCATATATAAGC-AATATCCT---CCTTCCTGATATATCTGTGTAGGAACCCATCCATCTGTATATTTGGCCACCATGGCCTTTTCCTG--TACCCCC-AGTCTACTAAACAGGTAGAGTCTGGTT-----------TATTCACTCTT--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29062838 135 + 31377067 TGTGTGTGTTTGTGGAT------------------CG-----------GTATCCT-----TG-TGGGTACATCTGTGAGAGAATTCATCCG--GG---------TCTTTATGGCTCCTTCCTGTCTGTCTCTGTATTGACTGAGAAGGTGTGGTCTTGTCTTTATT---ATTATGTATTTCCTT- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=826136.000000 s hg38.chr3_KI270935v1_alt 117553 355 + 197351 GAAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAATGTGC-GGTAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACAGCTGCCCCTTCAAGGCAAGGCCTCA----GCT----GAGTTCAGGAAATAGGAGAACCTGGCCCCGG------------AGCAACCCCAGAAGCGCAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGGTGACCAAGAGAGACAGACAGGCG-GTCA s panTro4.chr3_GL389630_random 81071 355 + 103936 GAAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAATGTGC-GGTAAGGATGAGGTGAGTCTTGAGGTAGCCTAGGCCACGGCTGCCCCTTCAAGGCAAGGCCTCA----GCT----GAGTTCAGGAAATAGGAGAACCTGGCCCCGG------------AGCAACCCCAGAAGCGCAGGACCACGAACGTCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGCCCCAAAGAAGATGCCGAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCGCCCCAGGCCATGTAGATGGAGAAGGACACACAGCTGGTGACCAAGAGAGACAGACAGGTG-GTCA i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 26398 353 + 111706 GTAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAGTGTGC-GGTGAGGATGGGGTGGGTCTTGAGGTAGCCTAGACCACAGCTGTCCCTTCAAGGCGAGGCCTCA----GCT----GAGTGCAGGAGATAGGAGAAGCTGGTCCTGG------------AGCAATTCCAGAAGCGCAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGGGGACCGAGAGAG--AGACAGCGT-GTCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 61729 353 + 192460366 GTAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAGTGTGC-GGTGAGGATGGGGTGGGTCTTGAGGTAGCCTAGACCACAGCTGTCCCTTCAAGGCGAGGCCTCA----GCT----GAGTGCAGGAGATAGGAGAAGCTGGTCCTGG------------AGCAATTCCAGAAGCGCAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGGGGACCGAGAGAG--AGACAGCGT-GTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 58729 353 - 187378091 GTAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAGTGTGC-GGTGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGTCCCTTCAAGGCGAGGCCTCA----GCT----GAGTGCAGGGGATAGGAGAAGCTGGTCCTGG------------AGCAATTCCAGAAGCGCAGGGCCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCGAAGAACACGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGGCGACCGAGAGAG--AGACAGCGT-GTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410216 353 - 91754291 GTAGAATCCTGA-CAGCCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCGCC----TTAAGTGTGC-GGTGAGGATGGGGTGGGTCTTGAGGTAGCCTAGGCCACAGCTGTCCCTTCAAGGCGAGGCCTCA----GCT----GAGCGCAGGAGATAGGAGAAGCTGGTCCTGG------------AGCAATTCCAGAAGCGCAGGACCACGAACACCCCGACCCCCAGCAGCAAGAGGCCGCCCAGGGACCCAAAGAAGATCCCAAAGAACGCGTCGAGTTTCATGCTCAGGTGCTCACAGTGCTCTCCCCAGGCCGTGTAGATGGAGAAGGACACACAGCTGGGGACCGAGAGAG--AGACAGCGT-GTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 926852 357 - 74750902 GAAGAATCCCAG-TAGTCTTCAGTCACCTTC----------CCTTTTCCAGTCTCCCAAAAGCAATGGCATC----TTAGGTGTGT-GGTGAGGACGGGGTGGGTCTTAAGGTATCCTAG-TCACAGCTGCCCCTTCAAGGTGAGGCCTCA----GCTTTCCGAGTCCAGAGGGTAGGAGAATCTGGTCCTGG------------AGCAACCCCAGAAGTGCAGGACCACAAACATCCCGAACCCCAGCAGCAAGAGGGCACTGAGGGCCCCAAAGAAGATCCCGAAGAACGCTTTGAGTTTCATGCTCAGGTGCTCACAGCGCTCACCCCAGGCTGTGTAGATGGAGAAGGACACGCAGCTGGGGACCGAGAGAG--AGACAGCGTGGTCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65425633 339 - 98207768 GAAG----------AGTCTCAAATCATCTTCATGCCGCAGGCCCTTTCCAGTCCCAC-AGAGCAGGGGCAGA----CTGA----------------GGGATGGGTCCCGAGGT--CCTAGGT-GCAGCTGCCCATCTGGGACAGGGCCTTACAATTCT----GAGTCCAAAGGGTAGGAGAACTTGTTCTTGG------------AGCAGCCGCAGAAGTGAAAGATCATAAATGCTAAGATCCCCAGTAGCAAGAGGGCGCCCAGGGTTCCGAAGAGGATCCCGTAGAATGCCCCAAGTTTCACACTTAGGTGCTCACAGTGTTCGCCCGAGGATGAGTAGATGGTGAAGGATGCGCAGCTGAAGACAGAGAGA---ATGCATTGTGGTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29062973 371 + 31377067 GAAGAATCCTGAGTCACCTTTAAGCACATTT-------------TTCTGAGTCTCCTCAAAGGATCGGTGCCACCTGCAAGTGTGTGGGTGAGGCTGGGGTGGGTCCTGAGGTATCCTAGGTCACAGCTGCCCCTTTGGGGCCAGGCCTCA----GCCTTCTGAGTCCAGGCGGTGGGAGTAGTGGTTCCCGGGGGAGTAGCGCCAGAAGCGCCAGAAGTACAGGACTGCAAACCCCACAGCCCCCAGCAGCAGGAGGATGAACAGGGCTCCAAAGAGGATTCCAAAGAAGGCACTGAGCTTCATGCCCAGATGCTCACAGCGCTCGCCCCAGGGCGTGTAGATGGAGAAAGGCACACAGCTGTGGACAGAGGGA---AGGGACAAG-GTCA i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120854784 0 + 123690457 C a score=338243.000000 s hg38.chr3_KI270935v1_alt 117908 153 + 197351 -GAGGCGGGAGCTCA----------------------GCCTCCCAGCCCCTCCTCTTCTGCTGGGGAAGA--AGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCGGAGAGA----CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGTGTGGG s panTro4.chr3_GL389630_random 81426 153 + 103936 -GAGGCGGGAGCTCA----------------------GCCTCCCAGCCCCTCCTCTTCTGCTGGGGAAGA--AGAGGTTCTGTAGGAGAGGCTGGGCTTGCCCCACTCTCCGGAGAGA----CTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGCGTGGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854784 153 + 123690457 -GAGGCGGGAGCTCA----------------------GCCTCCCAGCCCCTCCTCTTCTGCTGGGGAAGA--AGAGGTTCTGTAGGAGAGGCTGGGCTCGCCCCACTCTCCAGAGAGA----CTGAGTCAGCCCTGAGGCTGCGCTGAAGTGAGACCACTGGGCAAAGGAGGCAGGTGTGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 26751 153 + 111706 -GAGGCGGGAGCTCA----------------------GCCTCCCAGCCCCGCCTCTTCCGCTGGG---GA--AGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCGGAGAGAAAGGGTGAGTCAGCCCTGAGGCCGTTCTGAAGTGAGGCCACTGGGCCAA-GAGGCAGCTGTGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 62082 153 + 192460366 -GAGGCGGGAGCTCA----------------------GCCTCCCAGCCCCGCCTCTTCCGCTGGG---GA--AGATGTTCTCTAGGAGAGGCTGGGCTTGCCCCACTCTCCGGAGAGAAAGGCTGAGTCAGCCCTGAGGCCGTTCTGAAGTGAGGCCACTGGGCCAA-GAGGCAGCTGTGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 59082 153 - 187378091 -GAGGCGGgagctca----------------------gcctcccagccccGCCTCTTCCGCTGGG---GA--AGATGTTCTCTAGGAGAGGCTGGGCTCGCCCCACTCTCCGGAGAGAAAGACTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGGCCACTGGGCAAA-GAGGCAGCTGTGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410569 176 - 91754291 -GAGGCGGGAGCTCAGCCTCCCAGCCCCACCTCTTCCGCCTCCCAGCCCCGCCTCTTCCGCTGGG---GA--AGAGGTTCTCTGGGAGGGGCTGGGCTTGCCCCGCTCTCCGGAGAGAAAGGCTGAGTCAGCCCTGAGGCCGTGCTGAAGTGAGGCCACTGAGCAAAGGAGGCAGCTGTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 927209 155 - 74750902 -GAGGTGGGTGCTCA----------------------GCCTCCCAGCCTCTCTTCTCCTGCTGGGGCAGA--GGAGGTTCTCTAGGAGAGGCTGGGCTCGCCCCACTCTCTGGAGAGAGAGACTGAGTCAGCCCTGAGGTCATGCTGAA--GAGACCATTGGGCAAAGGAGGCAGGTGTGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65425972 131 - 98207768 -GTGACGAT----------------------------TCCTTCCA------------CTCCTGGG---GACCAGGGGTTATGCAAGACAGGCAGGGCT-------ATCAGCTGGGTGGAGGGTCCAGCCAGCTCTAAGGCCATTTTGAATTGAGGTCACCAATCAAAGGAGGGAGGCATAAC i mm10.chr16 C 0 C 0 s canFam3.chr33 29063344 103 + 31377067 GCAGTGGGGAG--------------------------GCCC---------------------------CA--GGAGGTTTCCCTCCACAGGCTGGG--------ACTCTCCTCTGGGGAAG--------------GAGGCAGAACCGAAGTGC--CTACTGGGTAGGGGAGACTGGCAGGGG i canFam3.chr33 C 0 I 403 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=45316.000000 s hg38.chr3_KI270935v1_alt 118061 21 + 197351 CTTTAAAAACATGGGCCTGgg s panTro4.chr3_GL389630_random 81579 21 + 103936 CTTTAAAAACATGGGCCTGgg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854937 21 + 123690457 CTTTAGAAACCTGGGCCTGgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 26904 20 + 111706 CTTTA-AAACATGGGCCTGgg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 62235 20 + 192460366 CTTTA-AAACATGGGCCTGgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 59235 20 - 187378091 CTTTA-AAACATGGGCctggg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410745 20 - 91754291 CTTTA-AAACATGGGCCTGgg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 927364 20 - 74750902 CTTTA-AAATGTGGGTCTAgg i calJac3.chr17 C 0 C 0 s mm10.chr16 65426103 19 - 98207768 CTTAA-AAAC-CATGTCTGGG i mm10.chr16 C 0 I 363 e canFam3.chr33 29063447 403 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=4683.000000 s hg38.chr3_KI270935v1_alt 118082 2 + 197351 cc s panTro4.chr3_GL389630_random 81600 2 + 103936 cc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854958 2 + 123690457 cc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 26924 2 + 111706 cc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 62255 2 + 192460366 cc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 59255 2 - 187378091 cc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410765 2 - 91754291 cc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 927384 2 - 74750902 ct i calJac3.chr17 C 0 I 1 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=576888.000000 s hg38.chr3_KI270935v1_alt 118084 332 + 197351 -ggcgcgggggctcacgcctgtaatcccagcacattgagaggctgaggcgggcgcatcacttgaggtcaggggttcgagaccagactggccaacacggtgaaa-ccccatctctactaaaaatac-aaaattagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggcagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcaacactgcactccagcctgggggacagagcaagactccgtctcaaaaaac-------aaaaacaaaaaCCTGGTGTGAATTCAGCTGCACGTGCAGTCAGCTGCACCTG s panTro4.chr3_GL389630_random 81602 332 + 103936 -ggcgcgggggctcacgcctgtaatcccagcacattgagaggctgaggcgggcggatcacttgaggtcaggggttcgagaccagactggccaacatggtgaaa-ccccatctctactaaaaatac-aaaattagccaggcgtggtggtgcgcacctgtaatcccagctactcaggaggctgaggcagaatcgcttgaacctgggaggtggaggttgcagtgagcccagattgcaacactgcactccagcctgggggacagagcaagactccgtctcaaaaaac-------aaaaacaaaaaCCTGGTGTGAATTCAGCTGCACGTGCAGTCAGCTGCACCTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120854960 340 + 123690457 -ggcgcggggggctcagcctgtaatcccagcacattgagaggctgaggtgggtggattacttgaggtcaggggttcgagaccagactggccaacatggtgaaacccccatctctactaaaaatac-aaaattagccaggcatggtggtgcgcacctgtagtcccagctactcaggaggctgaggcagaatcgcttgaacctgggaggtggaggttgcagtgagccgagattgcaacactgcactccagcctgggggacagagcaagactccgtctcaaaaaacaaaacaaaaaaacaaaaaCCTGGTGTGAATTCAGCTGCATGTGCAGTCAGCTGCACCTG i nomLeu3.chr11 C 0 M 186 s rheMac3.chrUn_JH291127 26926 331 + 111706 gggcctggtggctcgcgcctggaatcccagcactctgaaaggctgaggcgggcggatcacttgagatcaggagttcaagaccagactggccaacacggtaaaa-ccccatctctactaaaaatacaaaaattagccaggcgtggtggcgcgcacctgtagtcccagctactcgggaggctgaggcagaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctgggggacaga--gagaccccgtctc-aaaaac-------aaaaacaaaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGTCAGCTGTGCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 62257 331 + 192460366 gggcctggtggctcacgcctggaatcccagcactctgaaaggctgaggcgggcggatcacttgagatcaggagttcaagaccagactggccaacacggtaaaa-ccccatctctactaaaaatacaaaaattagccaggcgtggtggcgcgcacctgtagtcccagctactcgggaggctgaggcagaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctgggggacaga--gagaccccgtctc-aaaaac-------aaaaacaaaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGTCAGCTGTGCCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 59257 331 - 187378091 gggcctggtggctcacgcctggaatcccagcactctgaaaggctgaggcgggcggatcacttgagatcaggagttcaag--cagactggccaacacggtaaaa-ccccatctctactaaaaatacaaaaactagccaggcgtggtggcgggcacctgtagtcccagctactcgggaggctgaggcagaatcgcttgaacccgggaggcggagcttgcagtgagccgagattgcaacactgcactccagcctgggggacagagcgagaccccgtctc-aaaaac-------aaaaacaaaaacgtggAGTGAATTCAGCTGCGCGTGCAGTCAGCTGTGCCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 410767 333 - 91754291 gggcctggtggctcacgcctggaatcccagcactttgagaggctgaggcgggcggatcacttgaggtcaggagttcaagaccagactggccaacacggtaaag-ccccatctctactaaaaatacaaaaatgagccaggcgtggtggcgcacacctgtagtgccagctactcgggaggctgaggcagaatcgcttgaacctgggaggtggagcttgcagtgagccgagattgcaacactgcactccagcctgggggacagagcgagactccatctc-aaaaac-------aaaaacaaaaaCGTGGAGTGAATTCAGCTGCGCGTGCAGTCAGCTGCGCCTG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=22850.000000 s hg38.chr3_KI270935v1_alt 118416 16 + 197351 GGCGGCAGGGATGCCG s panTro4.chr3_GL389630_random 81934 16 + 103936 GGCAGCAGGGATGCCG i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 27257 16 + 111706 GGCAGCAGGGATGCCG i rheMac3.chrUn_JH291127 C 0 I 21 s macFas5.chr2 62588 16 + 192460366 GGCAGCAGGGATGCCG i macFas5.chr2 C 0 I 4 s papAnu2.chr2 59588 16 - 187378091 GGCAGCAGGGATGCCG i papAnu2.chr2 C 0 I 4 s chlSab2.chr15 411100 16 - 91754291 GGCAGCAGGGATGCCG i chlSab2.chr15 C 0 I 4 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120855300 186 + 123690457 M a score=25339.000000 s hg38.chr3_KI270935v1_alt 118432 34 + 197351 GCCACAGGTGGGCATGCGCAGTCACACccccgc-c s panTro4.chr3_GL389630_random 81950 34 + 103936 GCCACAGGTGGGCACGCGCAGTCACACccccgc-c i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 62608 34 + 192460366 GCCACAAGTGGGCATGCGCAGTCACAGCCCCGCC- i macFas5.chr2 I 4 M 425 s papAnu2.chr2 59608 33 - 187378091 GCCACAAGTGGGCATGCGCAGTCAcagccccgc-- i papAnu2.chr2 I 4 C 0 s chlSab2.chr15 411120 33 - 91754291 GCCACAAGTGGGCATGCGCAGTCACAgccccgc-- i chlSab2.chr15 I 4 C 0 e rheMac3.chrUn_JH291127 27273 21 + 111706 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120855300 186 + 123690457 M a score=26976.000000 s hg38.chr3_KI270935v1_alt 118466 82 + 197351 ccagcccggccccgccccgccccg------cccACCCGGAGAGCCGGgccccgccccacccgcgctccgcccgccccCTCCTTCGGCG s panTro4.chr3_GL389630_random 81984 88 + 103936 ccagcccggccccgccccgccccgccccgccccgcccGGAGAGCTGGGCCCCGCCCCACCCGCGCTCCGCCCGCCCCCTCCTTCGGCG i panTro4.chr3_GL389630_random C 0 C 0 s papAnu2.chr2 59641 68 - 187378091 ----cccggccccgcccctccccg----------cccggagagctgggccccgcccc-----cgccccgcccacccccTTCTTCGGC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 411153 64 - 91754291 ----cccggccccg-----ccccg----------cccggagagctgggccccggccc-----cgccccgcccATCCCGTTCTTGGGCG i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 27273 21 + 111706 I e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e macFas5.chr2 62642 425 + 192460366 M e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120855300 186 + 123690457 M a score=101888.000000 s hg38.chr3_KI270935v1_alt 118548 138 + 197351 GGATCTGGAACTGCAGCTGGCGGAGGGCCCGGAGCCCAGGTCTGCGTGGGGCCGCGGCTTCCTGCGCTGTTAACCAGCGGAGCCCCGGGGACTGCTGATGAGGGCAGGGGCAAAGGCGCCTCGCTTGACTGAGGGGCA s panTro4.chr3_GL389630_random 82072 133 + 103936 GGATCTGGAACTGCAGCTGGCCGAGGGCCCGGAGACCACGCCTGCGTGGGGCCGCGGCTTCCTGTG-----AACCAGCGGAGCCCCGGGGACTGCTGGTGAGGGCAGGGGCAAAGGCGCCTCGCTTGACTGAGGGGCA i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 27294 136 + 111706 GGATCTGGAACTGCAGCTGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCGCCGCGGCTTCCTGCGCTGTTCACCAGCGGAACCCC-GGGACTGCTGGTGAGGGCAGGGGCAAAGGCGCCTCCCGTGACTGAGGGGCA i rheMac3.chrUn_JH291127 I 21 C 0 s papAnu2.chr2 59709 136 - 187378091 GGATCTGGAACCGCAGCAGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCACCGCGGCTTCCTGCGCTGTTCACCAGCGGAACCCC-GGGACTGCTGGTGAGGGCAGGGGCCGAGGCGCCTCCCGTGACTGCGGGGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 411217 135 - 91754291 GGATCTGGAACCGCAGCAGGCGGAGGGCGCGGAGACCAGGCCTGCGT-GCGCTGCGGCTTCCTGCGCTGTTCACCAGCGGGA-CGC-GGGACTGCCGGTGAGGGCAGGGGCAAAGGCGCCGCCCGTGACTGAGGGGCA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e macFas5.chr2 62642 425 + 192460366 M e ponAbe2.chr3 199759195 20226 + 202140232 M e nomLeu3.chr11 120855300 186 + 123690457 M a score=121010.000000 s hg38.chr3_KI270935v1_alt 118686 97 + 197351 GGACTGG-CCTAGACACAGGACTG--CAGGTTCTTTTCCCACAAGGAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACTTTGGGCcct s panTro4.chr3_GL389630_random 82205 99 + 103936 GGACTGG-CCTAGACACAGGACTGCACAGGTTCTTTTCCCACAAGAAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACTTTGGGCccc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120855488 97 + 123690457 GGGCTGG-CCTAGACACAGGACTG--CAGGTTCTTTTCCCACAAGGAGGCAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACTCTGGGCcct i nomLeu3.chr11 M 186 C 0 s rheMac3.chrUn_JH291127 27430 95 + 111706 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCAcaaggagacagcagggaagcagcagccagatcaggtgggagggtttgactttgggc--- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 59845 95 - 187378091 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCACAAGGAGACAGCAGGGAAGCAGCAGCCAGATCAGGTGGGAGGGTTTGACTTTGGgc--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 411352 95 - 91754291 GGGCTGGCCCTAGACACAGGACTG--CAGGTTCCTTCCCCAcaaggagacagcagggaagcagcagccagatcaggtgggagggtttgactttgggc--- i chlSab2.chr15 C 0 C 0 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e calJac3.chr17 927386 1 - 74750902 I e macFas5.chr2 62642 425 + 192460366 M e ponAbe2.chr3 199759195 20226 + 202140232 M a score=410905.000000 s hg38.chr3_KI270935v1_alt 118783 260 + 197351 ggcgcggtggctcacgcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctactaaaaatgcaaaaatcagctgggcgtggtggtgcatgcctgtagtcccaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca- s panTro4.chr3_GL389630_random 82304 260 + 103936 ggcgcggtggctcacgcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccgtctctactaaaaatgcaaaaatcagctgggcgtggtggtgcgtgcctgtagtcccaactactcgggaggctgaggcaggagaatcgcttgaacgcgggagaaggacgttgcagtgagccgagaacgcaccactgcactccagcctgggcgaca- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120855585 260 + 123690457 ggcgcggtggctcacgcctgtaatctcagcactttgggaggccaaggtggacggatcacctgaggtcaggagttcgagaccagcctg-accaacatggcgaaa-ccccatctctactaaaaatgcaaaaatcagctgggcgtggtggtgcatgcctgtagtcccaactacttgggaggctgaggcaagagaatcgcttgaactcgggagaaggacgtggcagtgagccgagaacgcaccactgcactccagcctgggcgaca- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 27525 250 + 111706 ----------ctcacgcctgtaatctcagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctactaaaaatacaaaaatcagctgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggaggttgcagtgagtcgagatcacgccactgcactccagcctgggcgacg- i rheMac3.chrUn_JH291127 C 0 I 1 s papAnu2.chr2 59940 249 - 187378091 ----------ctcacgcctgtcatctcagcactttgggaggctgaggtgggcggatcacctgaggtcaggagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctactaaaaatacaaaaatcagctgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggagctggaggttgcagtgag-cgagaacgcaccactgcactccagcccgggcgacg- i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 411447 248 - 91754291 ----------ctcacgcctgaaatctcagcactttggaaggctgaggtgggcggatcacctgaggtca-gagtttgagaccagcctg-gccaacatggcgaaa-ccttgtttctactaaaaatacaaaaatcagctgggtgtggtggtgcgcgcctgtagtcacagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggaggttgcagtgag-cgagaacgcaccattgcactccagcctgggcgacg- i chlSab2.chr15 C 0 I 1 s calJac3.chr17 927387 263 - 74750902 ggcatggtggttcccacctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggttgggagttcaagaccagcctgaaccaatatggtgaaacccccatctctactaaaaatacaaaagttagccaggtgtggtggcgtgcacctatcatctcagctactggggaggtggaggcagaagaatcgcttgaacccgggaggcagaggttgctgtgagctgagaatgcaccactgcactccagcctgggtaaccg i calJac3.chr17 I 1 C 0 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e macFas5.chr2 62642 425 + 192460366 M e ponAbe2.chr3 199759195 20226 + 202140232 M a score=62341.000000 s hg38.chr3_KI270935v1_alt 119043 39 + 197351 aatgacactccatctcaaaacataaaaatataaaaaaTG s panTro4.chr3_GL389630_random 82564 39 + 103936 aatgacactccatctcaaaacataaaaatataaaaaaTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120855845 39 + 123690457 aatgacactccatctcaaaacataaaaatataaaaaaTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 27776 31 + 111706 aatgacactccatctc-------aaaaa-ataaaaaatg i rheMac3.chrUn_JH291127 I 1 C 0 s macFas5.chr2 63072 31 + 192460366 AATGACACTCCATCTC-------AAAAA-ATAAaaaatg i macFas5.chr2 M 425 C 0 s papAnu2.chr2 60190 38 - 187378091 aatgacactccatctcaaaaaataaaaa-ataaaaaatg i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 411696 38 - 91754291 aatgacactccatctcaaaaaataaaaa-ataaaaaatg i chlSab2.chr15 I 1 C 0 s calJac3.chr17 927650 34 - 74750902 agagatactcagtctc---aaataaaaa-ataaaaaa-G i calJac3.chr17 C 0 C 0 e mm10.chr16 65426122 363 - 98207768 I e canFam3.chr33 29063447 403 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=53544.000000 s hg38.chr3_KI270935v1_alt 119082 17 + 197351 TTTGGCTttggaaacca s panTro4.chr3_GL389630_random 82603 17 + 103936 TTTGGCTttggaaacca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120855884 17 + 123690457 TTTGGCTttggaaacca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 27807 17 + 111706 tttggctttggaaacca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63103 17 + 192460366 tttggctttggaaacca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 60228 17 - 187378091 tttggcTTTGGAAACCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 411734 17 - 91754291 tttggctttggaaacca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 927684 17 - 74750902 TTTGGCTttggaaacca i calJac3.chr17 C 0 C 0 s canFam3.chr33 29063850 17 + 31377067 TTTGCCTTTGGAACCCA i canFam3.chr33 I 403 C 0 e mm10.chr16 65426122 363 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1649457.000000 s hg38.chr3_KI270935v1_alt 119099 597 + 197351 tgccctgctgcttaacctactgcgt-cctggggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatagTTCTAAGCCC--CC--CTATGGCTCTTTTGGGTTTCAGAGTTTGTAATATAGCGCCTTTATTCTCCACACAGAGCAGGCACTCACAACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA----------------------------ATTCCTGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACCGATGAACACTAAATCAGtaccttttcagccacgaattcc-tttt----cgggtgttt--------atcctgagaaataattggagaagtgcacagatacatatgcccctgg s panTro4.chr3_GL389630_random 82620 597 + 103936 tgccctgctgcttaacctactgcgt-cctggggcaggttccttgtcatctctaagctgcagt-tttctcatcttcgaaatggTTCTAAGCCC--CC--CTATGGCTCTTTTGGGTTTCAGAGTTTGTAATATAGCGCCTTTATTCTCCACACAGAGCAGGCACTCACAACTCTCCTTTT--CCACTGTCCTCTCTTCCCTGGTCTCTGATCTCTC--------------GAGCCATCCTA----------------------------ATTCCTGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCCTCCACCTCCTGGCCACAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATCGCATCTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGGAAGCAACCGATGAACACTAAATCAataccttttcagccacgaattcc-tttt----cgggtgttt--------atcctgagaaataattaaagaagtgcacagatacatatgcccctgg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120855901 609 + 123690457 cgccctgctgcttaacctgctgcat-cccagggcagcttccttgtcatctctaagccgcagt-tttctcatcttcaaaatggctctaatGCC--CC--TTGTGGCTCCTTTGGGTTTCAGAGTTTGTAATATAGCGCCTTTATTCTCCACACACAGCAGGCACTCACAACTCTcctttt--ccactgtcccctcttccctggtctctgatctctCTC--TTTACAAAGGGAGCCATCCTA----------------------------ATTCCTGGACCCCTTGCAGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCACTCTGGGGGCTGTAGACCAGGTCGTAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGATTAACACAGAAAGCAACTGATGAACACTAAATCAataccttttcagccacgaattcc-tttt----tgggtgttt--------atcctgagaaataagtaaagaagtgcacagatacatatgcccctgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 27824 600 + 111706 tgccctgctgcttaacctactggct-ccccgggcaagttcccggtcatctttaagctgcagt-tttctcatcttcgaaatggtttcaatacc--cc--ctgTGGCTCCTTTGGGTTTCAGAGTTTGTAATA---------TATTCTCCACACAGAGCAGGCACTCACAACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA----------------------------ATTTCTGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCTCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTATAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACAGAAAGCAACTGATGAACACTAAATCAATACCTTTTCAACCACGAATTCT-TTTT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63120 600 + 192460366 tgccctgctgcttaacctactggct-ccccgggcaagttcctggtcatctttaagctgcagt-tttctcatcttcgaaatggTTTCAATACC--CC--CTGTGGCTCCTTTGGGTTTCAGAGTTTGTAATA---------TATTCTCCACACAGAGCAGGCACTCACAACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA----------------------------ATTTCTGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCTCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTATAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACAGAAAGCAACTGATGAACACTAAATCAATACCTTTTCAACCACGAATTCT-TTTT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 60245 600 - 187378091 TGCCCTGCTGCTTAACCTACTGGCT-CCCCGGGCAAGTTCCTGGTCATCTTTAAGctgcagt-tttctcatcttcGAAATGGTTTCAGTACC--CC--CTGTGGCTCCTTTGGGTTTCAGAGTTTGTAATA---------TATTCTCCACACAGAGCAGGCACTCACAACTCTCCCTTC--CCACTGTCCCCTCTTCCCAGGTCTCCGATCTTTCTC--GTTACAAAGGGAACCATCCTA----------------------------ATTTCTGGACCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGCAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACATAGATTAACACACAAAGCAACTGATGAACACTAAATCAATACCTTTTCAACCACGAATTCC-TTTT----CAGGTGTTT--------CTCCTGAGAAGTAATTAGAGAGATGCACAGATACATATGCCCCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 411751 596 - 91754291 tgccctgctgcttaacctactggct-ccccgggcaagttccttgtcatctttaagctgcagt-tttctcatcttcgaaatggTTTCAGTACC--CC--CTGTGGCTCCTTTGGGTTTCAGAGTTTGTAATA---------TATTCTCCACACAGAGCAGGCACTCACAACTCTCCCTTC--CCACTGTCCCCTCTTCCCTGGTCTCCGATCTTTCTC--GTTACAAAGGGAGCCATCCTA----------------------------ATTTCTGGGCCCCTTGCGGTGTCT-TGCCCAGCTTGGGTTCCCCAGCACTGTCATCCACCTCCTGGCCGAAG--CCCTATGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCATGGTCACAGTAGCCCCTACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGTCATAGCCCTTGTAGCCATTGCATTCGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTCGGGAAGGACACAGGTTAACACAGAAAGCAACTGATGAACACTAAAGCAATACCTTTTCAACCACGAATTCC-TTTT----CAGGTGTTT--------CTCCTGAGAAA----TAGAGAGGTGCACAGATACATATGCCCCTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 927701 567 - 74750902 taccctgct-tttaaccgactgggt-gccggggcagtttcctt---atctctcagctgccat-tttctcatcttcgaaatggttctaaatac--ccaactGTGGCTCCTTTGGGCCTCCGAG---GTAATATAGCGCCCTTATTCTCCACACAGAGCAGGCACTCACAACCCTCCTTTCTTCCACTGTCCCCTCTTCCCTGGTCTCTGGTTTCTCTCCAATCTCAAAGGGAGCCATCCTA----------------------------ATTCCTGGG-CCTTTGCAGGGTCT-TGCCCAGCTTGAGTTCCCCAGCAC--TCATCCGCCTCCTGGCCGTGG--CCCTACGCACCTGCAGCGGGGCCCACTGGGCAGGTGCTGGCACTGGCCTCCGTGGTCACAGTAGCCCCTACTGCACGGGGACACACAGGTGAAGCCGCTCTGGGGGCCGTAAACCAGGTTGTAGCCCTCGTAGCCACTGCATTTGAAGTAAGTCCTCAGCATGCTCACGTTCACTGTCAGGAAGAACACAGGTGAACACAGAAAGCAACCGATGGACACAAAATC--------------------------------------------------CTCCTGAGAAACGACTAGAGAAGTGCAC-GATACGTATGTCCCTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65426485 631 - 98207768 TACCCTGGTATTTTACTTCCTGGGTGCCTACTGGAGCCTCCTC----TCTCTTCAATGCAGTATTCCCCAAGTCTGGAATGGTTGAAGTAAC--CT-TTTGTGACTAGCTTGACTTTCAGAA---GCAATG-CATGTCTTTCTCCTCCATGCAGAGGAGTGCCACACA---CCCTTCTC--CTACTGCCCACT-TTCTCTGCTTTTCACCCTCCA----GCCACTGGG-GAGTCATCCCA-CTGTCAAGTCTTAGGAGAGGACATTGTCTTCCTGGGCCTACTGTGGTGTCT-CGTCAAATCTGAGTTCCCCAGTGC-----TTTGCTTTCCTGCCCCAGGCCCCTACCCACCTGCATTGGGGCCCATCTGGCAGGTGCTTGCATTGGCCTCCATTGTGACAGTAGCCCTCACTACATGGGGACACACAGGTGACACCATCCTGTGGGCTGTAGACCAGGTGGTAGCCTTTGTAGCCATCACATGTGAAGTACTCCTCCAGCATACTTAGGTTCACTGT-AGGCAGGAAAAGGATACATGGAGTAAGCAAACCACAGA-GGTAAATTCATTCCTTTCCATCAGGTAGTCAA-GTTTCAGGCAGGTGTTTATGAGATGTTTCTGAGAAACATCTGGTCAAGTGCCTAGAGTCCTGTATCCGTAG i mm10.chr16 I 363 I 573 s canFam3.chr33 29063867 605 + 31377067 TGTTCTGTTATTTAACCTCCTGGCT-ACCTGGGCAGATTCATTACC-----------------TACCTCTTCTTTAAAAGGGTCATACTACCTACC--CAGAAGC-----TAAGTGTCAGTGTTAGAAGTCATGCAGCATCTTTATCCACACAGAGTAAGTGCTCACA---CATCTTTT--CTATGGTCCCTTTTTCTCTGATCCCTGCTCTCTG----AGTCATCAGAGAACCATCCTAACTTCCAGACACCACCAGGTACCGTGGCATTTCTACGCCCCTTGCGGTATCTGTGCCCGGCCTGGAGTCTCCGGCTCTG-----CTCGTCCTGCCCTCTC--CCCGACTCACCTGCAGCGGGGCCCTTGGGGCAGGTGCTGACACTGGCCTCCGTGCTTACAATAGCCCTCACTGCACGGGGACACGCAGGTGAAGCCGCTCTGGGGGCTGTAGACCAGGCGGTAGTCCTTGTAGCTGTTGCATTTGAAGTAAGCCTTCAGCGTGCTCACGTTCACTGTC----AGGACACAGATGAACATGGAAAGCAATCAAT-AGCACCGGAtctatacctcttcaatcgggaattctgtttt----caggcattt--------atcctgagaaatccttggaaaagcatgcaaatctgtatgttcatgg i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=173086.000000 s hg38.chr3_KI270935v1_alt 119696 74 + 197351 acgttcagatcagcatggtggataatagt---aacgtttcagaagtagggtctggttaaataa--actactgcacatcc s panTro4.chr3_GL389630_random 83217 74 + 103936 acgttcagatcagcgtggtggataatagt---aacgtttcagaagtagagtctggttaaataa--actactgcacatcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120856510 77 + 123690457 acattcagatcagcgtggtggataatagtaacaacatttcagaagtggggtctggttaaataa--actactgcacatcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 28424 74 + 111706 ATATTCAGATCAGCGTGGTGGATAATAGTAACAACGTTTCAGAAGTGGGGTCGGGTTAAATAA-----ACTGCACATCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63720 74 + 192460366 ATATTCAGATCAGCGTGGTGGATAATAGTAACAACGTTTCAGAAGTGGGGTCGGGTTAAATAA-----ACTGCACATCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 60845 74 - 187378091 ATATTCAGATCAGCGTGGTGGATAATAGTAACAACGTTTCAGAAGTGGGGTCGGGTTAAATAC-----ACTGCACATCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 412347 74 - 91754291 ATATTCAGATTAGCGTGGTGGGTAATAGTAACAACGTTCCAGAAGTGGGGTCGGGTTAAATAA-----ACTGCACATCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 928268 75 - 74750902 GCATTCGGATCAGCATGGTGGA-AAT-GCAACAATGTTTCAGAAGTGGGGTCTGGTTAAATGA--ACTACTGCGGATCG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29064472 79 + 31377067 acgtccagagcagcgtggtttataatagcaaCAGTGTTTAATAGGTGAGGTTTTGTTAAACAAGGAATACTGTGCAACC i canFam3.chr33 C 0 I 58 e mm10.chr16 65427116 573 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=76307.000000 s hg38.chr3_KI270935v1_alt 119770 97 + 197351 ttaccaagggatGGTGCTTCCTATGGAAAAAGTTTCCTAGGGAAAAAGG------------------------------------------------TTCCTAGGGAAAAAGGTTCCTGTGGAAAAAGGTTCCTATGGAAAATGC s panTro4.chr3_GL389630_random 83291 97 + 103936 ttaccaagggatGGTGCTTCCTATGGAAAAAGTTTCCTAGGGAAAAAGT------------------------------------------------TTCTTAGGGAAAAAGGTTCCTAGGGAAAAAGGTTCCTATGGAAAATGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120856587 145 + 123690457 ttaccaagggatGGTGGTTCCCATGGAAAAAGTTTCCTAGGGAAAAAGGTTCCTATGGAAAAAGGTTCCAAGGGATGGTGGTTCCTATGGAAAAAGTTTCCTAGGGAAAAAGGTTCCTATGGAAAAAGGTTCCTAGGGAAAATGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 28498 65 + 111706 TTACCAAGGGATGACAGTTCCTATGGAAAAAGTTTCCTATGGAAAAAGT--------------------------------------------------------------------------------TTTCTATGGAAAATGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63794 65 + 192460366 TTACCAAGGGATGACAGTTCCTATGGAAAAAGTTTCCTATGGAAAAAGT--------------------------------------------------------------------------------TTTCTATGGAAAATGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 60919 64 - 187378091 TTACCAAGGGATGACAGTTCCTATGGAAAAA-TTTCCTATGGAAAAAGT--------------------------------------------------------------------------------TTTCTATGGAAAATGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 412421 49 - 91754291 TTACCAAGGGATGACAGTTCCTATGGACAAA----------------GT--------------------------------------------------------------------------------TTCCTATGGAAAATGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 928343 29 - 74750902 TTACCAAGGGATGCCA-------------------------------GT--------------------------------------------------------------------------------TTCCTATGGAA----- i calJac3.chr17 C 0 C 0 e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064551 58 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=312784.000000 s hg38.chr3_KI270935v1_alt 119867 124 + 197351 TTTCCTGaagagcacatgctttgaaggtggccagacttgggtggaaactgaaactctgctagtgactagatgtgtaattcaggga-----------------------------acattccttcactctttcagcttcagtttccttatcttt s panTro4.chr3_GL389630_random 83388 124 + 103936 TTTCCTGaagagcacatgctttgaaggtggccagacttgggtggaaactgaaactctgctagtaactagatgtgtaattcaggga-----------------------------acattccttcactctttcagcttcagtttccttatcttt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120856732 124 + 123690457 TTTCCTGaagagcacatgctttgaaggtggccagacctgggtggaaactgaaactctgctagttactagacgtgtaattcaggga-----------------------------acactctttcactctttcagcttcagtttccttatcttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 28563 124 + 111706 TTTCCTaaagagcgtatgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcaggga-----------------------------acattccttaactctttcagtgtcagtttccttatcttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63859 124 + 192460366 TTTCCTaaagagcgtatgctttgaaggtggccagacctgggttgaaactgaaactctactagtaactagatgtgtaattcaggga-----------------------------acattccttaactctttcagtgtcagtttccttatcttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 60983 124 - 187378091 TTTTCTAAAGAGCGTATGCTTTGAAGGTGGCCAGACCTGGGTTGAAACTGAAACTCTACTAGTAACTAGATGTGTAATTCAGGGA-----------------------------ACATTCCTTAACTCTTTCAgtgtcagtttccttatcttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 412470 123 - 91754291 TTTCCTaaagagcgtatgctttgaaggtggccagacccgggttgaaactgaaactctactagtaactagatgtgtaattcaggga-----------------------------acatt-cttaactctttcagtgtcagtttccttatcttt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 928372 107 - 74750902 ---------------ATgctttgaaggtggccagacctgagttgaaactcaaactc-actggtagctagttgtgtaattcaggga-----------------------------acactccttatctc-tgcagcttcagtttccttatgtct i calJac3.chr17 C 0 C 0 s canFam3.chr33 29064609 153 + 31377067 tttttttaagagcatacgctttgaagtaaaccagacctacgttgaaattcaagctctactactaactagttgtgtgctttggggaaatttcttTTTTTTTTTTGGGGGGGggggaaatttcttaactccttcagcctcagtttccttatctTT i canFam3.chr33 I 58 I 572 e mm10.chr16 65427116 573 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=286670.000000 s hg38.chr3_KI270935v1_alt 119991 131 + 197351 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtccacagtactcagtacagtgccggacacacagtaagcactcaaacaatggtaatgattattatAATGTATTT s panTro4.chr3_GL389630_random 83512 127 + 103936 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtccacagtactcagtacagtgccggacacacagtaagcact----caatggtaatgattattatAATGTATTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120856856 131 + 123690457 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgagataatgtgtccacagtactcagtacactgcctgacacacagtaagcactccaaaaatggtaatgattattatAACGTATTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 28687 130 + 111706 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtccacagtactcagtacactgcctgacacacagtaagcactc-aaaaatggaaatgattattCTAATGTATTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 63983 131 + 192460366 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatgaggtaatatgtccacagtactcagtacactgcctgacacacagtaagcactcaaaaaatggaaatgattattCTAATGTATTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61107 131 - 187378091 aaaaggAAATGATCATAATAGCACTTATGCTGCTGTGAgatttaaatgaggtaatatgtCCACAGTACTCAGTAcactgcctgacacacagtaagcactcaaaaaaTGGTAATGATTAttctaatgtattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 412593 131 - 91754291 aaaaggaaatgatcataatagcacttatgctgctgtgagatttaaatggggtaatatgtccacagtactcagtacactgcctgacacacagtaagcaatcaaaaaatggtaatgattattCTAACGTATTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 928479 121 - 74750902 aaaagcacagga----------acttacgctgctgtgagatttaaatgagataacgtgtccacaatactccgtacactgcctgacacacagtaaaccctcaaaaaacgaaaatggttattatAACGTATTT i calJac3.chr17 C 0 C 0 e mm10.chr16 65427116 573 - 98207768 I e canFam3.chr33 29064762 572 + 31377067 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=796885.000000 s hg38.chr3_KI270935v1_alt 120122 322 + 197351 TAAAATATG--ACACTATATTCAAACATACCATCA--TAATATGTCAAATGGGAATGTGGACAGAATATATGAGACAACCTGTTCACAACTGTTTAA-TGAGGAGGTTTTCCAACATTAGGAATGATTtgatcc---ttcagtaaaaaat----ggatgtctgaaggttcctag-gcataaaagaaagttcagaaggatatgtaggaaatactgttgtctctctggggattgggattaca--gggtt---tttttcctcttttctttttgttaagtttgtgtttcctaaagtttctgcaataaacatacgatgcttgtataataaaaaTTATAGGTTTTC s panTro4.chr3_GL389630_random 83639 321 + 103936 TAAAATATG--ACACTATATTCAAACATACCATTA--TAATATGGCAAATGGGAATGTGGACAGAATATATGAGACAACCTGTTCACAACTGTTTAA-TCAGGAGGTTCTCCAGCATTAGGAatgatttgat-c---ttcaataaaaaat----caatgtgtgaaggttcctag-gcataaaagaaagttcagaaggatatgtacgaaatattgttgtctctctggggattgggattaca--gggtt---tttttcctcttttctttttgttaagtttgtgtttcctaaagtttctgcaataaatgtacgatgcttgtataataaaaaTTGTAGGTTTTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120856987 321 + 123690457 TAAAATATG--ACACTATATTCAAACATACCATTA--TAATATGTCAAATGGGAATATGGACACAATATATGAGACAACCTGTTCACAATTGTTGAA-CGagcaggttatccaacattaggaatgatttgatcc---ttcaataaaaaat----cgatgtgtgaaggttcctag-gcataaaagaaagttcagacggatatgtatgaaatattgttgtctctctgggggttgggattaca--gggtt---tttttccttttttctttttgttaagtttg-gtttcctaaagtttctgcaataaacatacgatgcttgtataataaaaaTTATAGGTTTTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 28817 321 + 111706 TAAAATATG--ACACTATATTCAAACCTACCATTA--TAATATGTCAAATGGGAATATGGATACAATATATGAGACAATCTGTTCACAAATGTTTAA-CGAGGAGGTTATCAAACATTAGGAATGATTTGATCC---TTCAAtaaaaaat----cgatgtgtgaa-gttcttag-gcataaatgaaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattaca--gggtt---ttttccctcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggatacttgtataataaaaaTTATAGGTTTTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64114 321 + 192460366 TAAAATATG--ACACTATATTCAAACCTACCATTA--TAATATGTCAAATGGGAATATGGATACAATATATGAGACAATCTGTTCACAAATGTTTAA-CGaggaggttatcaaacattaggaatgatttgatcc---ttcaataaaaaat----cgatgtgtgaa-gttcttag-gcataaatgaaagttcagaaggatatgtacaaaatattgttgtctctctggggattgggattaca--gggtt---tttttcctcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggatacttgtataataaaaaTTATAGGTTTTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61238 318 - 187378091 taaaatatg--acactaTATTCAAACCTACCATTA--TAATATGTCAAATGGGAATATGGATACAATATGTGAGACAATCTGTTCACAAATGTTTAA-CGAGGAGGTTATCAAACATTAGGAATGATTTGATCC---TTCAATAAAAAAT----CGATGTGTGAA-GTTCTTAG-GCATAAACAAAAGTTCAGAAGGATATGTACAAAATA---TTGTCTCTCTGgggattgggattaca--ggggt---tttttcctcttttctttttgttaaatttgtgtTTCCTAAAgtttctgcaataaacataggatacttgtataataaaaattataggttTTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 412724 320 - 91754291 TAAAATATG--ACACTATATTCAAACCTACCATTA--TAATATGTCAAATGGGAATATGGATACAATATATGAGACAATCTGTTCACAATTGTTTAA-CGaggaggttatcaaacattaggaatgatttgatcc---ttcaataaaaaat----cgatatgtgaa-gttcttag-gtgtaaacgaaagttcagaagaatatgtac-aaatattgttgtctctctggggattgggattaca--ggggt---tttttcctcttttctttttgttaaatttgtgtttcctaaagtttctgcaataaacataggatacttgtataataaaaaTTATAGGTTTTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 928600 322 - 74750902 TAAAATGTG--ACACTATATTCAAATGTATTATAAAGCAATATGTGAAATGGGAACATGGACACAGCACATGAGATTGTCTGTTCACAACTGTTGaa-gaaggaggttaccaaacattaggaacgatttgatcc---ttcagtaaaaagc----caccgtgtgaaggttcctcg-gcataaaagaaagctcagaaggaaatgcacaaaatattg-----tctctgggcacgggaattaca--ggtttttctttcttctctcttctttttgttaaatgtttgtttcctacagtttctgcagtaaacatatgatacttatataacaaaaaTTTTAGGTTTTC i calJac3.chr17 C 0 I 912 s canFam3.chr33 29065334 329 + 31377067 taaaaTATAGCACACCACATTAAAATGT---ATGA--Taaaataataaatgggaacacatatacaatatacaaggtaatatgttcacaattgcttaagtaataaggtcaccaaacattaggtactacttgatccccttattataaaaaatattggtatgtgtgaagactcctaatgcataaaagaaaattcagaaggataggtgcaaaatggacttg--tctttggggcttggaattacacgtgatt---ttttttctctcttccttttgttaa-tctgtgtctcctcaagtttctacaataaacatattgtacttgtataataaaaaCTGTGGGGTTTC i canFam3.chr33 I 572 C 0 e mm10.chr16 65427116 573 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=11690.000000 s hg38.chr3_KI270935v1_alt 120444 8 + 197351 CTTAATTG------------------ s panTro4.chr3_GL389630_random 83960 8 + 103936 CTTAATTG------------------ i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857308 8 + 123690457 CTTAATTG------------------ i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29138 8 + 111706 CTTAATTG------------------ i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64435 8 + 192460366 CTTAATTG------------------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61556 8 - 187378091 CTTAATTG------------------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413044 8 - 91754291 CTTAATTG------------------ i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29065663 25 + 31377067 -TTGGTTGGCTTTCTTTAACAAAAGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65427116 573 - 98207768 I e calJac3.chr17 928922 912 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=48811.000000 s hg38.chr3_KI270935v1_alt 120452 29 + 197351 CATAGTCAGGG-------CT--------TGCCTCCCTGCGCCTC s panTro4.chr3_GL389630_random 83968 29 + 103936 CATAGTCAGGG-------CT--------TGCCTCCCTGTGCCTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857316 29 + 123690457 CATAGTCAGGG-------CT--------TGCCTCCCTGCGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29146 29 + 111706 CATAGTCAGGG-------TT--------TGCCTCCCTGGGCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64443 29 + 192460366 CATAGTCAGGG-------TT--------TGCCTCCCTGGGCCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61564 29 - 187378091 CATAGTCAGGG-------TT--------TGCCTCCCTGGGCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413052 13 - 91754291 CATAGTCAGGG-------TT------------------------ i chlSab2.chr15 C 0 C 0 s mm10.chr16 65427689 36 - 98207768 CACAGTCGGGGATGCCCCCT--------TACCTGACTGTGCCTG i mm10.chr16 I 573 I 5 s canFam3.chr33 29065688 37 + 31377067 CACAGTCAGGT-------CTAGGGGAGTTGTGTCCGTATGCCAC i canFam3.chr33 C 0 C 0 e calJac3.chr17 928922 912 - 74750902 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=814009.000000 s hg38.chr3_KI270935v1_alt 120481 304 + 197351 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCA-C-CCCCTG-CTCCGGGAGAGAGCGGGCTTAGCCTGGATTCTGGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTCCTGTTGTGTTTGGG--GCGGCCCCTGCCCTGTTCTCTGCCCTA-TACAGAAAATAGG--ACGTGTTATTCCTTTGTTTCTCTGACAAGCTTGCCAACT-----TATTCCTGTTCCAGGAAAACCGG----GGGCtgtcagcactgaaagggggctcagaaatcccatctcatttt-cagatgggggtgctga s panTro4.chr3_GL389630_random 83997 303 + 103936 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCA-C-CCCCTG-CTCCGGGAGAGAGCGGGCTTAGCCTGGATTCTGGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTTCTGTTGTGTTTGGG--GCAGCCCCTGCCCTGTTCTCTGCCCTA-TACAGAAAATAGG--ACGTGTTATTCCTTTGTTTCTCTGACAAGCTTGCCAACT-----TATTCCTGTTCCGGGagaaccgg----gggctgtcagcactgaaagggggctcagaaatcccatctca-ttt-cagatgggggtgctga i panTro4.chr3_GL389630_random C 0 I 5 s nomLeu3.chr11 120857345 299 + 123690457 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCA-C-CCCCTG-CTCCGGGAGAGAGTGGGCTTAGCCTGGATTCTGGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCAGTTTCTGTTGTGTTTGGGGTGTGGCCACTGCC-------CTGCCCTA-TACAGAAAATAGG--ATGCGTTATTCCTTTGTTTCTCTGCCAAGCTTGCCAACT-----TATTCCTGTTCTGGAagaaacag----gggctgtcagcactgaaagggggctcagaaatcccatctcatttt-cagatgggggtgctga i nomLeu3.chr11 C 0 I 78 s rheMac3.chrUn_JH291127 29175 304 + 111706 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCA-C-CCACTG-CTCCAGGAGAGAGCAGGCTTAGCCTGCATTCTAGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGG--ATGTGTTATTCGTTTGTTACTCTGACAAGCTTGCCAACT-----TATACCTGTTCCAGGagaaccag----gggctgtcagcactgaaagggggctcagaaatctcatctcatttt-cagatgggggtgctga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64472 304 + 192460366 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGAGATTTCA-C-CCACTG-CTCCAGGAGAGAGCAGGCTTAGCCTGCATTCTAGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAAACAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGG--ATGTGTTATTCGTTTGTTACTCTGACAAGCTTGCCAACT-----TATACCTGTTCCAGGagaaccag----gggctgtcagcactgaaagggggctcagaaatctcatctcatttt-cagatgggggtgctga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61593 304 - 187378091 CTACCCCAACTCCCCA--------ACATACAGTAGTTCTGAGGGATTTCA-C-CCACTG-CTCCAGGAGAGAGCAGGCTTAGCCTGCATTCTAGGAGAAGCTCTTGCTTGGTCCCAGACCCAAGTAAACCAGCACTTTCTGTTGTGTTTGGG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGG--ATGTGTTACTCCTTTGTTACTCTGACAAGCTTGCCAACT-----TATACCTGTTCCAGGAGAACCAG----GGGCTGTCAGCACTGAAAGGGGGCTCAGAAATCCCATCTCATTTT-CAGATGGGGGTGCTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413065 296 - 91754291 --------ACTCCCCA--------ACATAAAGTAGTTCTGAGGGATTTCA-C-CCACTG-CTCCAGGAGAGAGCAGGCTTAGCCTGCATTCTAGGAGAAGCTCTTGCTTGGTCCCAGAACCAAGTAAAACAGCACTTTCTGTTGTGTTTGAG--GTGGCCACTGCCCTATTCTCTGCCCTA-TACAGAAAATAGG--ATGTGTTATTCCTTTGTTACTCTGACAAGCTTGCCAACT-----TATACCTGTTCCAGGagaaccag----gggctgtcagcacggaaagggggctcagaaatcccatctcatttt-cagatgggggtgctga i chlSab2.chr15 C 0 C 0 s calJac3.chr17 929834 308 - 74750902 CTACCCCAGCTCGCCA--------ACATACAGCAGTTCTAAGGGATTTCATC-TTGTTC-CTCCAGGAGAGAGGGGGCTTAACCTGGATTCTAGAAGAAGCTCTTGCTTGCTCCTGGACCCGAGTAAAACAGCAGTTTCTGTTGTGTTTGGG--ATGGCCGCTGCTCTATTCTCTGCCCCA-TCCAGAAAATAGG--GTGCGTTATTCTTTTCTTTCTCTGACAAGCTTGCCAACT-----CATTCCTGTTCTGGGAGAACAGGGGCTGGGCTGTCAGCACTGAAACGGGGCTCAGAAATCCCACCTCATTTT-CAGGTGGGGGTG-TGA i calJac3.chr17 I 912 C 0 s mm10.chr16 65427730 273 - 98207768 CCACTGCAGCTACCCA--------ATGCACAGTAGTT-GGAGTGACTTCA-CTTTACTG-CTCCAAAAGGCAGGAAACATAAACTGGTTTCTAGAAGCCGCTCTCATCAGGTGCTAGACCCAAGTTGAATAGCAGTTTCTCCCAAGTTGGGC--ATAGTCCCTACCCTATTCTCTGCTCCATTTCAGAAGCTAGGGAGGGGGCTGTTCCTCTGTCTCCCTTGC--------------------TCCCTG-CCCAGGAGAACCAG----AGGCTG------------------CCAGAAACCCCATCCCATTTT-CCCATTGGGACCATGC i mm10.chr16 I 5 C 0 s canFam3.chr33 29065725 285 + 31377067 ---CCCTAACGCCCTACCACACATACACAAAGTAGTT-TGGAGGATTTCA-CATTGTTGCCCCCAGGAGGGAGGAGGCACTGCCTGGATTC------------------AATCCCA-CCCTCAGTGACACAGCGGCTTCCGCAGGGTTTGGT--GTGGTCACTGCCTCACT------CCTA-------GGATAGG--GTGGTCTATTCCTTTCCTCCTCTGGCAAGCTTACCAACTGATCCCATTCTTGTTTCGGGGTaatcag----ggatcatcacagctgacggggacctcagaaatcccatctatttttccacatgggggtgtcaa i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=43435.000000 s hg38.chr3_KI270935v1_alt 120785 19 + 197351 ggcctggcctggggaaggt s panTro4.chr3_GL389630_random 84305 19 + 103936 ggCCTGGCCTGGGGAAGGT i panTro4.chr3_GL389630_random I 5 C 0 s nomLeu3.chr11 120857722 19 + 123690457 GGCCTGGCCTGGGGAAGGT i nomLeu3.chr11 I 78 C 0 s rheMac3.chrUn_JH291127 29479 19 + 111706 ggcctggcctggggaagGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64776 19 + 192460366 ggcctggCCTGGGGAAGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61897 19 - 187378091 GGCCTGGCCTGGGGAAGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413361 19 - 91754291 ggcctggCCTGGGGAAGGT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65428003 19 - 98207768 GTTCTGGCTTGAGTTGGGC i mm10.chr16 C 0 I 387 s canFam3.chr33 29066010 15 + 31377067 -gccttggatggggga--- i canFam3.chr33 C 0 C 0 e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=6612.000000 s hg38.chr3_KI270935v1_alt 120804 4 + 197351 gctt s panTro4.chr3_GL389630_random 84324 4 + 103936 GCTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857741 4 + 123690457 GCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29498 4 + 111706 GCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64795 4 + 192460366 GCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 61916 4 - 187378091 GCTC i papAnu2.chr2 C 0 I 296 s chlSab2.chr15 413380 4 - 91754291 GCTC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066025 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=4200.000000 s hg38.chr3_KI270935v1_alt 120808 2 + 197351 gG s panTro4.chr3_GL389630_random 84328 2 + 103936 GG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857745 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29502 2 + 111706 GG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 64799 2 + 192460366 GG i macFas5.chr2 C 0 I 184 s papAnu2.chr2 62216 2 - 187378091 GG i papAnu2.chr2 I 296 C 0 s chlSab2.chr15 413384 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066025 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=105.000000 s hg38.chr3_KI270935v1_alt 120810 3 + 197351 GGA s panTro4.chr3_GL389630_random 84330 2 + 103936 GG- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857747 3 + 123690457 GGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29504 3 + 111706 GGG i rheMac3.chrUn_JH291127 C 0 I 287 s macFas5.chr2 64985 3 + 192460366 GGA i macFas5.chr2 I 184 C 0 s papAnu2.chr2 62218 3 - 187378091 GGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413386 2 - 91754291 GG- i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066025 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=26624.000000 s hg38.chr3_KI270935v1_alt 120813 18 + 197351 GTGTTGA-----GGCCTGGCCTC s panTro4.chr3_GL389630_random 84332 23 + 103936 GTGTTGAGGCCTGGCCTggcctg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857750 18 + 123690457 GTGTTGA-----GGCCTGGCCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29794 18 + 111706 gtgttga-----ggcctcgcctg i rheMac3.chrUn_JH291127 I 287 C 0 s macFas5.chr2 64988 18 + 192460366 GCGTTGA-----GGCCTGGCCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62221 18 - 187378091 GTGTtga-----ggcctggcctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413388 18 - 91754291 GTGCTGA-----GGCCTGGCCTG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29066025 7 + 31377067 ----------------tggcttc i canFam3.chr33 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=44821.000000 s hg38.chr3_KI270935v1_alt 120831 46 + 197351 -----GGGGAGGTGCTG------------------------------------------------------------------------------GGGGGTGTTGAGGCCTGGCCTGGGGAAGGTGCTG s panTro4.chr3_GL389630_random 84355 46 + 103936 -----gggaaggtgctg------------------------------------------------------------------------------gggggtgttgaggcctggcctggggaaggtgctg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120857768 46 + 123690457 -----GGGAAGGTGCTG------------------------------------------------------------------------------GGGGGTGTTGAGGCCTGGCCTGGGGAAGGTGCTG i nomLeu3.chr11 C 0 I 292 s rheMac3.chrUn_JH291127 29812 46 + 111706 -----gggaaggtgctg------------------------------------------------------------------------------aggagcgttgaggcctggtctggggaaggtgctg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65006 124 + 192460366 -----GGGAAGGTGCTGGGGGGTGTTGAGGCCTGGCCTGGCCTGGGGAAGGTGCTGGGGGGTGTTGAGGCCTGGCCTGGCCTGGGGAAGGTGCTTAGGGGTGTTGAGGCCTGGCCTGGGGAAGGTGCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62239 51 - 187378091 gccttggGAAGGTGCTG------------------------------------------------------------------------------GGGAGTATTGAggcctggcctggggaaggtgctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413406 17 - 91754291 ----------------------------------------------------------------------------------------------------------------GCCTGGGGAAGGTGCTT i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066032 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=43111.000000 s hg38.chr3_KI270935v1_alt 120877 28 + 197351 GGGGGTGTTGAGGCCTGGCCTG----------------------------------GCCTGG s panTro4.chr3_GL389630_random 84401 28 + 103936 gggggtgttgaggcctggcctg----------------------------------gcctgg i panTro4.chr3_GL389630_random C 0 I 224 s nomLeu3.chr11 120858106 28 + 123690457 GGGGGTGTTGAGGCCTGGCCTG----------------------------------GCCTGG i nomLeu3.chr11 I 292 I 34 s rheMac3.chrUn_JH291127 29858 28 + 111706 gggggtgttgaggcctggcctg----------------------------------gcctgg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65130 62 + 192460366 GGGGGTGTTGAGGCCTGGCCTGGCCTGGGGAAGGTGCTTGGGGGTGTTGAGGCCTCGCCTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62290 23 - 187378091 gggggtgttgaggcctg---------------------------------------gcctgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413423 28 - 91754291 GGGGGTGTTGAGGCCTGGCCTG----------------------------------GCCTGG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066032 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=60594.000000 s hg38.chr3_KI270935v1_alt 120905 32 + 197351 GGAAGGTGCTGGGGGGTGTTGAGGCCTGGCCT s panTro4.chr3_GL389630_random 84653 32 + 103936 ggaaggtgctggggggtgttgaggcctggcct i panTro4.chr3_GL389630_random I 224 C 0 s nomLeu3.chr11 120858168 32 + 123690457 GGAAGGTGCTGGGGGGTGTTGAGGCCTGGTCT i nomLeu3.chr11 I 34 C 0 s rheMac3.chrUn_JH291127 29886 32 + 111706 agaaggtgctggggggtgttgaggcctggcct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65192 32 + 192460366 GGAAGGTGCTGAGGGGTGTTGAGGCCTGGCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62313 32 - 187378091 ggaaaatgctggggggtgttgaggcctggcct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413451 32 - 91754291 GGAAGGTGCTGGGGAGTGTTGAGGCCTGGCCT i chlSab2.chr15 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066032 0 + 31377067 C e calJac3.chr17 930142 0 - 74750902 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=41305.000000 s hg38.chr3_KI270935v1_alt 120937 17 + 197351 GGCCTGGGGAAGGTGCT s panTro4.chr3_GL389630_random 84685 17 + 103936 ggcctggggAAGGTGCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120858200 17 + 123690457 GGCCTGGGGAAGGGGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29918 17 + 111706 ggCCTGGGGAAGGTGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65224 17 + 192460366 GGCCTGGGGAAGGTGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62345 17 - 187378091 ggcctggggaaGGTGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413483 17 - 91754291 GGCCTGGGGAAGGTGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 930142 17 - 74750902 GGCCTGGGGAAGGTGCT i calJac3.chr17 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e canFam3.chr33 29066032 0 + 31377067 C e ponAbe2.chr3 199759195 20226 + 202140232 M a score=578372.000000 s hg38.chr3_KI270935v1_alt 120954 252 + 197351 TGCACAGGGTGACACCATTTCAGGGAGTAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTCATATCCTCCCGCTGGAGAGCAGAGACGATGGGGGTGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCAATTTTAT-----GAAACTAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGCAAGGCCCTGGCT-GGGTGCTTGCTCCGTGAAGCTGTATACGTGTGACTGCCTC- s panTro4.chr3_GL389630_random 84702 252 + 103936 TGCACAGGGTGACACCATTTCAGGGAGTAGTTGCCTCTGTCCCCAG--CCAGTCTCCAGTCTCCAGCTTCATATCCTCCCGCTGGAGGGCAGAGACGATGGGGGTGTCCCTGTGTATGCTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCAATTTTAT-----GAAACTAAATTGCTGCTGTTTTATTAGCAGCCACAGTCAGCAAGGCCCTGGCT-GGGTGCTTGCTCCGTGAAGCTGTATACGTGTGACTGCCTC- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120858217 252 + 123690457 TGCACAGGGTCACATCATTTCAGGGAGTAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTCATATCCTCCCGCTAGAGGGCAGAGACGATGGGGGTGTCGCTGTGTATGTTT---AAATGCAATGGCATTTTAAGAAAACTATTAGCAATTTTAT-----GAAAATGAATTGCTGCTGTTTGATTAGCAGCCACAGTCAGCAAGGCCCTGGCT-GGGTACTTGCTCTGTGAAGCTGTCTGCATGTGACTGCCTT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 29935 252 + 111706 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGGTGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCAATGTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGCAAGGCCCTGGCT-GAGTACTTGCTCTGTGAAGCTGCATACATGGGACTGCCTT- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65241 252 + 192460366 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGGTGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCAATGTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGCAAGGCCCTGGCT-GAGTACTTGCTCTGTGAAGCTGCATACATGGGACTGCCTT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62362 252 - 187378091 TGCACAGGGTCACATCATTTCAGGGAAGAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTAATAGCCTGCAGCTGGAGGACAGACATGATGGGGGTGTCCTTGTGTATGTTT---AAGTGCAATGGCATCTTAAGAAAACTATTAGCAATGTTCT-----GAAAATAAATTGCTGCTGTTTTATTAGCGGCCACAGTCAGCAAGGCCCTGGCT-GAGTACTTGCTCTGTGAAGCTGCATACATGGGGCTGCCTT- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413500 252 - 91754291 TGCACAGAGTCCCATCATTTCAGGGAAGAGTTGCCTCTGTCCCTGG--CCAGTCTCCAGTCTCCAGCTTAATATCCTGCAGCTGGAGGACAGACATGATGGGGGTGTCCTTGTATATGTTT---AAGTGCAATGGCATTTTAAGAAAACTATTAGCAATGTTAT-----GAAAATAAATTGCTGCTGTTTTATTAGCAGCCACGGTCAGCAAGGCCCTGGCT-GGGTACTTGCTCTGTGAAGCTGCATACATGTGACTGTCTT- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 930159 216 - 74750902 TGCA--------GATCATTTCCGGG------------------------------CCAGTCTCCAGCTTCACACCCACCAGCTGGAGGGCAGAGATGACGGGAATGCCCTTGTGTAGGTTT---AAGTGCAATGGCACTTTCAGAAAACCAGTAGCAATTTTAT-----GAAAACAAATTGCTGCTGTTTCCTGAGCAGCGGCAGTCAGCAAGGCTGGGCCG-GAGCACTCGCTCTGTGAAACCGCAGGCACGTGGCTGCCTT- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29066032 250 + 31377067 tgcacagggtcacCC---TTCAAGGAGGGGAAACCTCTGCCCCTAGGTCAGGTCTCCAGCCTTCAACTGAATTTCCTCCAGCTGGAGGGCAAAGGCAAAAGGGATGTCCTTGTTTATGTTTATAAAGCACAATGGTTTTTTAACAAAATCATTACCAATTTCATCAAAAGAAAGAAAACCG-----------TCAGCAGTGATGGTCAGGAAGGTGGCAATTAGAGTAATTGGTCTGTGAAACCATATCCCTGGGGACTCACCA i canFam3.chr33 C 0 C 0 e mm10.chr16 65428022 387 - 98207768 I e ponAbe2.chr3 199759195 20226 + 202140232 M a score=1598132.000000 s hg38.chr3_KI270935v1_alt 121206 588 + 197351 AGCAGTGCTGGCTGCTCCTGCTCTCGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGAAAAACTCAATTAGCTTGTTT---GTGTGGGC-----TGAAGCA-CCTCTGTTTGCCC------------------------------GCCCCCCGCAGT------------GACCCCCATAGTGTCCCCGGAATGGACGGACTCACGGGCTGTCACATCGCGCACGTCTTCCCCGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCT------------CCGTGGAAC---GTGGTATAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTCAATGACCGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGATGGGGCTTCCCGAGGCCGGTGCTGC---AGAATCGCTGTGTGGGAGGGCAACGGTGA--------gggggggtggggggctgggggtgggggatgaggaaga-gatctgggggctTA-GGGGGACACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGGTTAGAGGATG-GCAGATGG--GGG-- s panTro4.chr3_GL389630_random 84954 596 + 103936 AGCAGCGCTGGCTGCTCCTGCTCTTGAATCTAAAAA--GCAGCTGGACAAAATGTTC-ACGTTTTCGCTCAAAACCAAACAAACAGAAAAACTCAATTAGCTTGTTT---GTGTGGGC-----TGAAGCA-CCTCTGTTTACCC------------------------------GCCCCCCGCAGT------------GACCCCCATAGTGTCCCCGGAATGGACGGACTCACGGGCTGACACGTCGCGCACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCT------------CCGTGGAAC---GTGGTATAAGAACGCCTCCACCACCGCGACCAGCAGCTGGTTGTTCAGGAAGTCAATGACGGGGCCCCGAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGGATGGGGCTTCCCGAGGCCGGTACTGC---GGAATCGCTGTGTGGGAGGGCAACGGTGAggggggctggggggctggggggctgggggTGGGGGATGAGGAAGA-GATCTGGGGGCTCA-GGGGGACACAGTCCCACTTACATTC------GTTCCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTCTGTATGCCACCTAGGTTAGAGGATG-GCGGATGG--GGG-- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120858469 584 + 123690457 AGCAGCGCTGGCTGCTCCTGCTCCTGAATCTAAAAA--GCAGCTGGATAAAATGTTC-ACGTTTTCGCTCAAAAC----CAAACAGAAAAACTCAGTTAGCTTGTTT---GTGTGGGC-----TGAAGCA-CCTCTGTTTACCC------------------------------GCCCCCCGCAGT------------GACCCCCATACTGTCCCCGGAATGGACGGACTCACGGGCTGACACGTCGCGCACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTCATTCCTGGGCTTCTCACTCCT------------CCGTGGAAC---ATGGTATAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACAGGGCCCCGAGGGCGGTACTGGAACTCTGAGATGACTACCCAGTGTTGAATGGGGCTTCCCGAGGCCGGTGCTGG---GGAATCGCTGTGTGGGAGGGCGACAGTGA---------GGGGGCTGGGGGGCTGGGGGTGGGGGATGAGGAAGAGGATCTGGGGGCTCA-GGGAGACACAGTCCCACTTACATTT------GTTTCACTTGGCTGTTGTGGAGAAAGGCCCGCATGTCCAGGGATCCCAGTCTGTATGCCACCTAGGCCAGAGGATG-GGGGATGG--GGG-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 30187 584 + 111706 AGCAGTGCTGGCTACTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGAAAAACTCAACTAACTTGTTT---GTGTGGGC-----GGAAGCA-CCTCCGTTTACCC------------------------------GCCCCCTGCAGT------------GACCCCCACATTGTCCCTGGAATGGATGGACTCACGGGCTGTCACATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCT------------CCGTGGAAC---CTGGTAGAAGAACGCCTCCACTACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCTGG---GGAATCGCTGTGTGGGAGGGTGACGGTGA--------GGGGGGCCAGGGAGC-------GGGGGATGAGGAAGAGGACCTGGGGGCTCA-GGGGGACACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGGACAGAGGATG-GGGGATGGGCGGG-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 65493 584 + 192460366 AGCAGTGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGAAAAACTCAACTAACTTGTTT---GTGTGGGC-----GGAAGCA-CCTCCGTTTACCC------------------------------GCCCCCTGCAGT------------GACCCCCACATTGTCCCTGGAATGGATGGACTCACGGGCTGTCACATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCT------------CCGTGGAAC---CTGGTAGAAGAACGCCTCCACTACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCTGG---GGAATCGCTGTGTGGGAGGGTGACGGTGA--------GGGGGGCCAGGGAGC-------GGGGGATGAGGAAGAGGACCTGGGGGCTCA-GGGGGACACAGTCCCACTTACATTC------GGTTCACCTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGGACAGAGGATG-GGGGATGGGCGGG-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 62614 584 - 187378091 AGCAGTGCTGGCTGCTCCTGCTCTTGAATCTAAAAG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCaaaaccaagcaaacagaaaaactcAACTAACTTGTTT---GTGTGGGC-----GGAAGCA-CCTCCGTTTACCC------------------------------GCCCCCTGCAGT------------GACCCCCACACTGTCCCCGGAATGGATGGACTCACGGGCTCTCACATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACTCCTCCCTCCT------------CCGTGGAAC---CTGGTATAAGAACGCCTCCACCACCGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACCCCGAGATGACCATCCAGTGTTGAATGGGGCTTCCCGAGGCAGGTGCTGG---GGAATTGCTGTGTgggagggtgacggtga--------ggggggccagggagc-------gggggatgaggaagaggacctgggggctca-gggggaCACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTATGCCACCTAGGACAGAGGATG-GGGGATGGGCGGG-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 413752 582 - 91754291 ---AGTGCTGGGTGCTCCTGCTCTTGAATCTAAACG--GAAGCTGGATAAAATGTTC-ACGTTTTCTCTCAAAACCAAGCAAACAGAAAAACTCAACTAACTTGTTT---GTGTGGGC-----GGAAGCA-CCTCCGTTTACCC------------------------------ACCCCCTGCAGT------------GACCCCCACACTGTCCCCGGAATGGATGGACTCACGGGCTGTCACATCCCACACGTCTTCCCTGGAGATGGGCTGGAAGACCACGTGGTTCCTGGACACCTCACTCCT------------CCGTGGAAC---CTGGTATAAGAACGCCTCCACCACTGCAGCCAGCAGCTGGTTGTTCAGGAAGTCGATGACGGGGCCCCAAGGGCGGTACTGGAACTCCGAGATGACCCTCCAGTGTTGAATGGGGCTTCCCGAGGCCGGTGCTGG---GGAATCGCTGTGTGGGAGGGTGACGGTGA--------GGGGGGCCAGGGAGC-------GGGGGATGAGGAAGAGGACCTGGGGGCTCAGGGGGGACACAGTCCCACTTACATTC------GGTTCACTTGGCTGTTGCGGAGAAAGGCCCGCATGTCCAGGGTCCCCAGTATGTACGCCACCTAGGACAGAGGATG-GGGGATGGGCGGG-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 930375 574 - 74750902 AGCAGCACT------TCCTGCTCTTGAATCTAAAAA--GCGGATGGATAAAATGTTC-ACGTTTTCTCTCAGAATCAAACAA--AGAAAAACTAAATTAACTTGCAT---GTGTGGGC-----TGAAGCACCCTCGGTTTACCC------------------------------GCCCCCCCCCAG------------TCACCCCACACTGTCCCCGGGATGGACTGACTCACGGGCCGCCACATCGCGCACGTCTTCCCTGGAGAGGGGCTGGAAGACCACGTCGTTCCTGGGCTCCTCACTCCT------------CCGGGGAACATGCTGGTGTAAGAACGCCTCCACCACCGCGGCCAGCAGCTGGTTGTTCAGGAAGTGGATGACAGGGCCCCAAGGGCGGTACTGGAACTGCGACATGACCGTCCAGTATTGCATGGGGCTTCCTGAGGCTGGTGCTGG---GGAATCGCTGTATGGGAGGGCAACGGTGA--------GGGGGGCTGGGGGCC-----------GGTGAGGAAGAAGACGTGGGGGCTCA--GGGGTCACCGTCCCACTTACATTT------GGTTCACTTCGCTGTTGTAGAGAAAGGCCTGCCCGTGCAGGGTCCGCAGTCTGTACGCCACCTAGGGCAGAGGATGAGGGAATGG--GGG-- i calJac3.chr17 C 0 I 257 s mm10.chr16 65428409 633 - 98207768 AGCTACATCTTGTGTCCCTGTTC-TGAGTCTAAAAGTAGCTGTTGTGGGAAGTTTTA-AA---TTCATTCAAAGATTTACAGACATCCAAGCTAACTTAACCTGCTTCAGCTGTGGACCTGCTGCACACA-TTACTTTCTACCAAGGGTTGACATGGCCTGCAGATCTGTCATGGCCCTCTGCTTTTCTCCTCTAACAAATCCCTCCATTGTCTCCAAGATAG--TGACTCACGAGCCATCTGGTCCTGGACATCTGCCCTCGAGATGGGGAAGAAGTGGACGTCCTTCCTGGCTTCTCCACTCCTCTTCTGCCTCTCCTGCCGAGC---CTGCAGGAGGAAGGCCTCCATCACGGCGCCTATCAGCTGGTTGTTCAGATAGTGGATGAGCGGGCCCCTGGGACGGTACTTGAAGTGGGAGGTGACCTTCCAGTGATGAATGGACTTGCTCGAGGGCTGTGCTCC---GGGAGAGCTGTATGGAAGGGGTACAGTG---------GGGGGTTTGAGGAGC-------AGGAGA-GAGGGAGA------GGGGAGCCA-TGGGGG-ACAGCTTCACTTACGTTCGTATCAGTTCCACTAAGCTGTTGGAGAAAAAAGCCCGCATGTCCAGGTTCTCTAGTATGTTCGCCACCTACAATGGAGGAAG-----ATGG--GGG-- i mm10.chr16 I 387 I 1 s canFam3.chr33 29066282 562 + 31377067 AGCAATGTTTGGTGCT-CTGCTCTTGAGTCTAGAAA--GCTGGTGGGTGAAATGTTTAACGATTTCCCTCAAAAAT-----GATAAAAAAA-------------------ATCTAGTC-------------CCCCTGTTCACCT------------------------------GCCCCCTTGGCT------------GTCTCTGTGACTATGGCCAGGA--GAGTGACTCACGAGCCAGCACACTGTGCACGTCTTCCCTGGAGATGGAGTGGAAGTTCACGTCGGTCCTGGGCCTCCCACTTCTGTTCTTCCTCCACCACGAGGC---CTGGGGTAAGAACGCTTCCACCACTGCATCCAGCAGCTTGGTGTTCAGGAAGTCGATGACGGGACCCTGAGGAAGGTACTGGAACTTCGAGAAGACTCTCCAGTGTCTACGTAAACTTCCCGAGGCCGGCGCTGCACTGGAATTGCTGCGTGGGAGGGGCACCGTGA---------GGTGGTAAGGGTGC-------AGGTG--GAGGGGGGAGACGCGGGGGCCAA-GGGGG--ACAGTCCCACTTACATCT------GTAGCACTTCGGAGTTCTGGAGAAAGGCCCGCACATTCAGGTTCCCCAGTCTGTAGGCCACCTAGGGCA-AGGATG-GGGG-TGG--GGGCG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=737302.000000 s hg38.chr3_KI270935v1_alt 121794 397 + 197351 TGG--GGGTG---AGGCCCCATCCGGGGGGGAGAC-------------------------------------------------------------------------------------------------------------------GCCCTCCCACCTTGATGGGTGTATTCATCC----CTGTTTCCTCCTGGAACGGGAGCCCCAGGACCC-CAGCACCTTCCTCACCTGTCTCTGCACCCTTGCACTCTAGCCTAGCTCAGTGAGTGTCATGGGTCCTTGCTTAAT-AATGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGTCCCCC-CCTCAGCCTC-ATATGACGAGCAGAGAATCTGACATGAATGGCCCCTACCT-TGCCTCTGACACA----TGACTCATGACCT-------CCTCCCCAGTATATTGaacatggg----ttgtt------tagacc----taggagatggtc-ggggctgggggtgtcaaggtgacttaggtggagtctaaactcaaagagtgcattgtctggcgcagg s panTro4.chr3_GL389630_random 85550 397 + 103936 TGG--GGGTG---AGGCCCCATCCAGGGGGT-GAC-------------------------------------------------------------------------------------------------------------------GCCCTCCCACCTTGATGGGTGTATTCATCC----CTGTTTCCTCCTGGAACGGGAGCCCCAGGACCC-CAGCACCTTCCTCACCTGTCTCTGCACCCTTGCACTCTAGCCTAGCTCAGTGAGTGTCACGGGTCCTTGCTTAAT-AATGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGTCCCCG-CCTCGGCCTC-ATATGACGAGCAGAGAATCTGACATGAATGGCCCCTACCT-TGCCTCTGACACA----TGACTCATGACCT-------CCTCCCCAGTATATTGAACATGGG----TTGTT------TAGCCC----TAGGAGATGGTCAGGGGCTGGGGGTGTCAAGGTGAGTTAGGTGGAGTCTAAACTCAAAGAGTGCACCATCTGGCGCAGG i panTro4.chr3_GL389630_random C 0 I 840 s nomLeu3.chr11 120859053 398 + 123690457 TGG--GGGTG---AGGACCCATCCAGGGGGGAGAC-------------------------------------------------------------------------------------------------------------------CCCCTCCCACCTTGATGGGTGTATTCATCC----CTGTTTCCTCCTGGAACGCAAGCCCTAGGACCC-CAGCACCTTCCTCACCTGTCTCTGCACCCTCACACTCTGGCCTAGCTCAGTGACTGTCATGGGTCCTTGTTTCAT-AATGTTTGTT-GAGAGTGAAGGGTTTTCCATTCTGTCCCCCTCCTTGGCCTC-ATATGACGAGCGGGGAATCTGACATGAATGGCCCCTACCT-TGCCTCTGATGCA----TGACTCATGACCT-------CCTCCCC-GTATATTGAACATGGG----TTGTT------TAGACC----TAGGAGATGGTCAGGGGCTGGGGGTGTCAAGGTGACTTAGGTGGAGTGTAAACTCAAAGAGTGCATTGTCTGGCGCAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 30771 356 + 111706 TGG--GGGTG---AGGCCCCATCCAGAGGGGAGAT-------------------------------------------------------------------------------------------------------------------CCCCTCCCACCTTGATGGGTGTATTCATCC----CTGTTTCCTCCTGGAACGGGAGCCCCAGGACCC-CAGCACATTCCTCACC-ATCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AATGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGTCCCCCTCCTCAGCCTC-------------------------------------------GCCTCTGATGCA----TGACTCATGACC--------CCTCCACAGTATACTGAACATGGG----TTAAG------TAGACC----TAGGAGGTGGTCAGGGGCTGTGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTCAAAGAGTGCATAGTCTGGTGCAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 66077 440 + 192460366 TGG--GGGTG---AGGCCCCATCCAGAGGGGAGATCCCCTCCCACCTTG-----------CATC---AATACATACACCTTGATGCATGTATTCATCCCTGTTTCCTCCTGGAACAG-----------------GAGCCCCAGGGGAGACCCCCTCCCACCTTGATGGGTGTATTCATCC----CTGTTTCCTCCTGGAACGGGAGCCCCAGGACCC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCGAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AATGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGTCCCCCTCCTCAGCCTC-------------------------------------------GCCTCTGATGCA----TGACTCATGACC--------CCTCCACAGTATACTGAACATGGG----TTAAG------TAGACC----TAGGAGATGGTCAGGGGCTGTGGGTGTCAAGGTGACTTAGGTGGAGTCTAAACTCAAAGAGTGCATAGTCTGGTGCAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 63198 421 - 187378091 TGG--GGGTG---AGGCCCCATCCAGAGGGGAGATCCCCTCCCACCTTGATGCATGTATTCATCCCTGTT---------------------------------TCCTCCTGGAACAG-----------------GAGCCCCAGGGGAGACCCCCTCCTACCTTGATGGGTATATTCATCC----CTGTTTCCTCCTGGAACGGGAGCCCCAGGACCC-CAGCACATTCCTCACC-ATCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AATGTTTGTT-GTGAGTGAAGGGTTTTCCATTCTGtccccctcctcagcctc-------------------------------------------gcCTCTGATGCA----TGACTCATGACC--------CCTCCACAGTATACTGAACATGGG----TTAAG------TAGACC----TAGGAGGtggtcaggggctgggggtgtCAAGGTGACTTAGGTGGAGTCTAAACTCAAAGAGTGCATAGTCTGGTGCAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 414334 418 - 91754291 TGG--GGGTG---AGGCCCCATCCAGAGGGGAGACCCCCTCCCACCTTGATGCATGTATTCATC--------------------------------------------------CCTGTTTCCTCCTGGAACAGGAGCCCCAGGGGAGACCCCCTCCCACCTGGATGGGTGTATCCATCC----CTGTTTCCTCCTGGAACGGGAGCCGCAGGACCC-CAGCACATTCCTCACC-GTCTCTGCATCCTCGCACTCTAACCTAGCCCAGTGACTGTCGCGGGTCCTTGCTTAAT-AATGTGTGTT-GTGAGTGAAGGGTTTTCCGTTCTGT-CCCCTCCTCAGCCTC-------------------------------------------GCCTCTGATGCG----TGACTCATGACC--------CCTCCCCAGTGTACTGaacatggg----ttaag------tagacc----taggaggtcgtcaggggctgggggtgtcaaggtgactcaggtggagtctaaactcaaaga--gcacagtctggtgcagg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 931206 396 - 74750902 TGGGTGGGTG---AGGCCCCATACACAGAGGAGAG-------------------------------------------------------------------------------------------------------------------CCTCTCCCGCCTTGATCCGTTTATTCACCC----CTGTTTCCTCCTTGAATGTGAGTCCCAGGACCT-GGATACATTTCTCACCTATCTCTGCATCCTCGCCCTCTAGCCTAGTCCAGTGACGGTCACGGGTCCTTGTTTAAT-A------TTT-GTGAGGGGAGGGTTTTCCATTCTCTCCCCATCCTAGGCCTC-ATATGACAAGCGGAGAATCTGATGTGCATGGCCCCTCCTT--GCCTCTGGTCCA----CGACTCTTGGCCC-------CTGCCCCAGTATATTGGACATCGA----TTGTT------TAGGCAGAAGTAGGAGCTGGTCAGGTGCTGCAGGTGTCAAGGTGACTTAGGAGGAGTCTAAATTC--AGAGTGCATAGTCTGGTGCAGG i calJac3.chr17 I 257 C 0 s mm10.chr16 65429043 332 - 98207768 TGG--GAGGATATAGGCCTAATGAGGATTAGAGAG---------------------------------------------------------------------------------------------------G---------------TCTCTCCCAATT---------------------------------TTGAATGTGGGGCCTAG-------------------ATTGCTCTTTTCATTCCCACACCCAGGCTCAGGTCAGTGACTGACCTGGGTCCTTGCTTAAT-AA-ATATTCA-GTGGGTGAAGAATGTGGCATTCTTCC-----CTTCTGCCATAATGTTGCCAGGGGAACATGTGAGACGAAC-------------ATCTCTGCTCCATCTCTGATCCCAGTCC--------ACCCTCATATGTACCAAACACAAACTCTTCAGC------TAAGCC----CTAGAGATGTCCAGGTGCCAGGAATGTC------ACCTG--------TTATATCCAAAGAGCCTTTGGTCAAGGGCAGC i mm10.chr16 I 1 C 0 s canFam3.chr33 29066844 390 + 31377067 TGG--GAGTG---AGGCCCCACCCGAAGAGGACA--------------------------------------------------------------------------------------------------------------------CCTCTCCCACTTGCATGTACTTATTTGTCCACATCTGGCTCCGTTTTGCACACGAGCACCAGGACCCACAGACTGCTTCTCACC---ATCTGCATCCCCACGCCCCAGCCTAGCCTGGTGGCCCTCGTGGGTCCCTGCTTACTGAACATTTGCTGGAGAGTCAAGGACTCTGCACACC--------TCCCTGCCTC-CCATGACAAGGGGGGAATCTGAAATGAGTGGCCCCTACCTTTGCCTCCGCCCCC----TGACTCACGCTCTCGTTCTCGCCCCACATGTTTTTAAACATTGA----TTATGTCCAGCTAGACC----TAGGGGATGGTCGGGTGCTGGGG--GTCAAGCTGACTCAGG----------------AAAGACCCCTAGTTGGTGAAGT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M a score=50473.000000 s hg38.chr3_KI270935v1_alt 122191 28 + 197351 tgacaaatgtcaacagaTTTTACCGTGT s nomLeu3.chr11 120859451 28 + 123690457 TGACAAATGTCAACAGATTTTACCGTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31127 28 + 111706 TGACAAATGTCAACAGATTTTACCACgt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 66517 28 + 192460366 TGACAAATGTCAACAGATTTTACCACGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 63619 28 - 187378091 TGACAAATGTCAACAGATTTTACCAtgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 414752 26 - 91754291 tgac--acgtcaacagaTTTCACCATGT i chlSab2.chr15 C 0 I 722 s calJac3.chr17 931602 23 - 74750902 TGACAAATGGCAACAGATTTTAC----- i calJac3.chr17 C 0 C 0 s mm10.chr16 65429375 28 - 98207768 AGATGAATGTCATCAGACCTGATTCGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29067234 28 + 31377067 AGACAGGTGTCAACGGACTTCCCCTTAC i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199759195 20226 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=12867.000000 s hg38.chr3_KI270935v1_alt 122219 14 + 197351 GGAGTGTGGAGTGG s ponAbe2.chr3 199779701 14 + 202140232 ggagtgaggagtgg i ponAbe2.chr3 M 20226 C 0 s nomLeu3.chr11 120859479 14 + 123690457 GGAGTGTGGAATGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31155 14 + 111706 ggagtggggagtgg i rheMac3.chrUn_JH291127 C 0 I 317 s macFas5.chr2 66545 14 + 192460366 ggagtggggagtgg i macFas5.chr2 C 0 I 358 s papAnu2.chr2 63647 14 - 187378091 ggagtggggagtgg i papAnu2.chr2 C 0 I 438 s chlSab2.chr15 415500 14 - 91754291 GGAGTGTGGAGTGG i chlSab2.chr15 I 722 C 0 s calJac3.chr17 931625 2 - 74750902 ----------AT-- i calJac3.chr17 C 0 C 0 s mm10.chr16 65429403 12 - 98207768 GGGATTTAATGT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29067262 10 + 31377067 AGGGTCTAGA---- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=183527.000000 s hg38.chr3_KI270935v1_alt 122233 94 + 197351 GGAGTGCTAGGCTTGCAGTAGTGataatag---cagtcatcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacgcgttatcat s ponAbe2.chr3 199779715 90 + 202140232 ggagtgCTAGGCTTGCAGTAGTAA-aataa------tcatcatgtttgaatac-----ctgtgtgtcaggcactggactaaatgcttgacacacgttctcat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120859493 91 + 123690457 GGAGTGCTAGGCTTGCAGTAGTaataatag------caatcatgtttgaatac-----ttgtgtgtcaggcactggactaaatgcttgacacacgttatcat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31486 91 + 111706 ggagtgCTATGTGTGCAGTAGTaataatag---caattacaatgtttgaatac-----ttgcgtgtcgggcaccgtactaaatgcttgacgcac---atcat i rheMac3.chrUn_JH291127 I 317 C 0 s macFas5.chr2 66917 91 + 192460366 ggagtgCTATGTGTGCAGTAGTaataatag---caattacaatgtttgaatac-----ttgtgtgtcgggcaccgtactaaatgcttgacgcac---atcat i macFas5.chr2 I 358 C 0 s papAnu2.chr2 64099 91 - 187378091 ggagtgCTATGTGTGCAGTAGTAATAATAG---CAATTACAATGTTTGAATAC-----TTGCGTGTCGGGCACCGTACTAAATGCTTGACGCAC---ATCAT i papAnu2.chr2 I 438 C 0 s chlSab2.chr15 415514 91 - 91754291 GGAGTGCTATGCTTGCAGTAGTaataatag---caattagaatgtttgaatac-----ttgcgtgtcgggcaccgtactaaatgcttgacgcac---atcat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 931627 87 - 74750902 GGAGTGCCACGCTAACAGCAGTAATAACAA------AAATAGTTTTCGAATAC-----CTGTGTGTCGGCCACCATAC----TGCTTTACATGCATTGTTAT i calJac3.chr17 C 0 I 2038 s mm10.chr16 65429415 86 - 98207768 ------CTCTGGCAGTCAGGGTATTAATag---taataatcactttgaattatgcctgttgtgtttcag------tactaagtgctttacacta-ttatcat i mm10.chr16 C 0 C 0 s canFam3.chr33 29067272 96 + 31377067 -TGCTGTTGTACCAGCAGTAGGAATAATTATTATCATtataatttttgagcac-----ttgtattttaggcaccatggtaagcgctttacatacattatcat i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=379268.000000 s hg38.chr3_KI270935v1_alt 122327 180 + 197351 ttaaacggtgatacggcctgttgactcaggtgc----tatgattgtccctgtgtttacagatgacctgttat--atgatgtgtctagttagcacacctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctacagcccCAACCACTCAGCAGTTGTGCCACTTTGCCT s ponAbe2.chr3 199779805 180 + 202140232 ttaaacggtgatacggcctgttgactcaggtgc----tatgattgtccccgtgtttacagatgacctgttat--atgatgtgtctagttagcacacctgctccagtga----------------------ggggcagagcagggattctgattctgggtgtgcagggttctagagcccCAACCACTCGGCAGTTGTGCCACTTTGCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120859584 179 + 123690457 ttaaatggtgatacagcctgttgactcaggtgc----tatgattgtccctgtgtttacagatgacctgttat--atgatgtgtctagttagcaca-ctgctctagtga----------------------ggggcagagcagggattctgattctgggtgtgcaggattctagagccccaaccactcggcagttgcgccactttgcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31577 180 + 111706 ttaaacggtgagacagcctgttgactcaggtgc----tatgcttgtccctgtgtttacagatgacctgttac--ataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagaggttttgattctgggtgtgcaggatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67008 180 + 192460366 ttaaacggtgagacagcctgttgactcaggtgc----tatgcttgtccctgtgtttacagatgacctgttac--ataatgtgtgtaattaacatacctgctctagtga----------------------ggggcagcgcagaggttttgattctgggtatgcaggatgctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64190 180 - 187378091 TTAAACGGTGAGACAGCCTGTTGACTCAGGTGC----TATGCTTGTCCCTGTGTTTACAGATGACCTGTTAC--ATAATGTGTGTAATTAACATACCTGCTCTAGTGA----------------------GGGGCAGCGCAGAGATTTTGATTCTGGGTGTGCAGGATGCTAGAGCCTCAAACACTCGGCAGTTGTGCAACTTTGCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 415605 177 - 91754291 ttaaacggtgagacagcctgttgactcaggtgc----tgtgcttgtccctgtgtttacagatgacctgttac-----atgtgtgtaattaacatgcctgctctagtga----------------------ggagcagcgcagagattttgattctgggtgtgcaggattctagagccTCAAACACTCGGCAGTTGTGCAACTTTGCCT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65429501 182 - 98207768 ttaaatcttaatacaacctactgacc--ggtactacttactatcgtccacttttatataca-aagTTGATATAAATAACTTGTTTAATTATTGCTCCTGCTCTAGAGA----------------------GAGGCAGGGTAGAGTTTCAGGTTCC-TGTGTATAGGAGTCTAGAGGTCCTGCCATTCACCAATCTGGCTACTTtgctt i mm10.chr16 C 0 C 0 s canFam3.chr33 29067368 201 + 31377067 ttaaaccttgacacaacccgttgacacaggtat----tatgggtatttctac-tttacagatgagacatcaa--atagtttgtctaattattgcacctgttctagggaatgattattgcacctgttctagggaatgttctagaggattagaacccgggtatgtatgactctggagcctcagcgcttcagctattgtgctacTTGGCGT i canFam3.chr33 C 0 C 0 e calJac3.chr17 931714 2038 - 74750902 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=218618.000000 s hg38.chr3_KI270935v1_alt 122507 82 + 197351 GTGACTGAGGTATGG--------CATGGCAGCCAAGAAGAGGGAGCCGCCCGTTCCCTCTGGGAAGTCAGGGAAGACTCCCGGGAGGTGA s ponAbe2.chr3 199779985 82 + 202140232 GTGACTGAGGTATGG--------CATggcagccaagaagagggagccgccccttccctctgggaagtcagggaagactccctggaggtga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120859763 82 + 123690457 GTGACTGAGGTATGG--------CATggcagccaagaagagggagctgccagttccctcttggaagtcagggaagactccctggaggtga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31757 82 + 111706 gtgattggggtatgg--------catggaagccaagagcagggagcacccagttccctctgggaagtcagggaagtctccctggaggTGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67188 82 + 192460366 GTGATTGGGGTATGG--------CatggaagccaagagcagggagcacccagttccctctgggaagtcagggaagactccctggaggTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64370 82 - 187378091 GTGATTGGGGTATGG--------CATGGAAGCCAAGAGCAGGGAGCACCCAGTTCCCTCTGGGAAGTCAGGGAAGACTCCCTGGAGGTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 415782 82 - 91754291 GTGATTGGGGTATGG--------CatggaagccaagaacagggagcacccagttccctctgggaagtcagggaagactgcctggaggTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 933752 78 - 74750902 gtgactgaggtgtgg--------catgGGAGCCAAGAC---GCAGCCCTCA-TTCCCTCTGGGAAGTCAGGGAAGACTCCCTGGAGGTGA i calJac3.chr17 I 2038 I 1866 s mm10.chr16 65429683 71 - 98207768 --aatggggatatagac-gaggtcatggtatc-------agaggggtccctgtgccctttggggaatcaggga---------ggaggtga i mm10.chr16 C 0 C 0 s canFam3.chr33 29067569 90 + 31377067 GTGGTTGAGGGatggacaggggcctacggggccaagaggaaggagctgctggttccctctgggaagtcgaggagggcttcctggaggTGA i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=422214.000000 s hg38.chr3_KI270935v1_alt 122589 226 + 197351 ---AATGTCCTTTAGTTT--CTTTCAGATCATAACC------------------AAGATGCTTAGAGGTCTCGGCTGGGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGTC-----GAGGTTTCT--------------------GTCTTGGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATGGATGACA-AGATGAAGGCC--GCACAGCGATGGTTCCGCCCTG s ponAbe2.chr3 199780067 225 + 202140232 ---aatgtcctttagct---CTTTCAGATCATAACC------------------AAGATGCTTAGAGGTCTCGGCTGGGGTGACTTGG-CACCCTGGCCTCTGCTTATGATGAGTT-----GAGGTTTCT--------------------GTCCCGGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGATGGATGACA-AGACGAAGACC--GCACAGTGATGGTTCCGCCCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120859845 226 + 123690457 ---aatgtcctttAGTTT--CTTTCAGATCATAACC------------------AGGAAGCTTAGAGGTCTCAGCTGGGGTGACTTGG-CATCCTGGCCTCTGCTTATGATGAGTC-----GAGGTTTCT--------------------GTCCTGGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAAGAGGCTCC-GGCCTCCTCTGGCAGTTGAATCCAGAGAGATGACA-AGACGAAGGCC--ACACAGTGATGGTCCTGCCCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 31839 226 + 111706 ---AACGTCCTTTGGTTT--CTTCCAGGTCATACCC------------------GAGATGCTTAGAGGTCTCGGCTGGGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGCT-----GAGGTTTCT--------------------GTCCCCGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAACAGGCTCC-GGCCTTCTCTGGCAATTGAATCCAGATGGATGACA-AGATGAAGGCC--GCACAGGGATGGTTCCGCCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67270 226 + 192460366 ---AACGTCCTTTGGTTT--CTTCCAGGTCATACCC------------------GAGATGCTTAGAGGTCTCGGCTGGGGTGACTTGG-CACCCTGGCCTCTGCTTGTGGTGAGCT-----GAGGTTTCT--------------------GTCCCCGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAACAGGCTCC-GGCCTTCTCTGGCAATTGAATCCAGATGGATGACA-AGATGAAGGCC--GCACAGGGATGGTTCCGCCCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64452 226 - 187378091 ---AACGTCCTTTGGTTT--CTTCCAGGTCATACCC------------------GAGATGCTTAGAGGTCGCGGCTGGGGTGACTTGG-CACCCTGGCCTCtgcttgtggtgagct-----gaggttTCT--------------------GTCCCCGGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCGT----GGGGCAAGAGGCTCC-GGCCTCCTCTGGCAATTGAATCCAGATGGATGACA-AGATGAAGGCC--GCACAGGGATGGTTCCGCCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 415864 224 - 91754291 ---AACGTCCTTTCGTTT--CTTCCAGATCATACCC------------------GAGATGCTTAGAGGTCTCGGATGGGGTGACTTGG-CACCCTGGCCTCTGCTTATGGTGAGTT-----GAGGTTTCT--------------------GTCCCCCGCCTTCCTCACTTCCTAATGCCCTGCACCTCCCAT----GGGGCAAGAGGCTCC-GGCCTC--CTGGCAATTGAATCCAGATGGATGACA-AGATGAAGGCC--GCACAGGGATGGTTCCGCCCTC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65429754 239 - 98207768 ---------------ctt--ctgCCATATAGCAGCCAGAGAGTGCGAATCATGAGGAGTACCCAGAGGGACAGACTGGAGTGACGTGC-CACCCGAGATTCTTCTCAGGGCAAGCT-----GGTGATTCTAACACATTCTGTGGTCTCTAATCCTGAAGCTTCCTGGCATCCTAGGCCCTTGAACGACCCCT-----GGGCAAGAGGCTCC---CCCTCTTTGGGAAATTAAGGTAGCTGAAGGAT----GTGTAAGC----TACTGCAAGGTCCCTG----- i mm10.chr16 C 0 C 0 s canFam3.chr33 29067659 257 + 31377067 AATACCTTCCTGGGGTTGAAATACCATATGACACCC---AAGTGCAAGTCTCTAGGGACACTCAGGAGG-GAGGCTGGGGTGACTCGGCCACCCTACACCCGAGTTATTCCAGTCCCCTGGGGGGTCACT--------------------GTCCTGGG-CTTCCTGCCTTCCCCAT-CCTTCCGCCGGCCCTCCTGGGGGCAGGAGGCTCTGGGCCTCCTCTGGCAGTCAAGTCTCGATGGGTGGCAGATGTGGAGCCCGGGAGCAGGGCTGGCCCCTGCTTG i canFam3.chr33 C 0 C 0 e calJac3.chr17 933830 1866 - 74750902 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=592068.000000 s hg38.chr3_KI270935v1_alt 122815 204 + 197351 GCCTGAACCCGCCAAGCGCCCCCTCCCACCCAGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACTTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAAAAGTCTGTCGGGC-CAGCC s ponAbe2.chr3 199780292 203 + 202140232 GCCTGAACCCGCCAAGCGCCCCCTCCCACCCAGAGCTCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTCCACTGAGCAGGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCC-AAAAGTCTGTCGGGC-CAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120860071 204 + 123690457 GCCTGAACCCGCCAAGCATCCCCTCCCACCCAGAGCATGGCCTGCAGCACTGACCAAGGCGTTGAGCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAAGTTCTGGAGATGGGAGAAGCAAATGTGTCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAAAAGTCTGTCGGGC-CAGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32065 204 + 111706 GCCTGAACCCGCCAAGCGTCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAGAAGTCCGTCGGGC-CAGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67496 204 + 192460366 GCCTGAACCCGCCAAGCGTCCCCTCCCACCCGGAGCGTGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAAAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAGAAGTCCGTCGGGC-CAGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64678 204 - 187378091 GCCTGAACCCGCCAAGCGTCCCCTCCCACCCGGAGCGCGGCCCGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAGAAGTCCGTCGGGC-CAGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416088 204 - 91754291 GCCTGAACCCGCCAAGCGTCCCCTCCCACCCGGAGCGCGGCCTGCAGCACTGACCGAGGCGTTGACCTCTGCCATGGAGGCATTTTCCTCTTCACTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTAGAGATGGGAGAAGCAAATGTATCAT-----------------------------------------CACCCCACGGTTTACCCAGACTTACCCAAGAAGTCCGTGGGGC-CAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 935696 243 - 74750902 GCCTGAACC--CCAAGCTCTCCTTCCCGCCCAGAGTGCAGCCTGCAGCACTGACCGAGGCGTTGATGTCTGCCATGGAGGCATTTTCCTCTTCGCTGAGCAAGAGCTGGATGACTCTTAAGGGAGGTTCTGGAGATGGGAGAAGGAAATTCATCATCACCCCATGGTTTACACAGATGGGAGAAGGAAATTCATCAGCACCCCATGGTTTACCCATACTTACCCAAGAAGTTTGTTGGGT-CGGCC i calJac3.chr17 I 1866 C 0 s mm10.chr16 65429993 191 - 98207768 -GGAGACCCTTTCAAGATCCACTTCCCACTGGGAGCC-------CAGCACTGACCGAGGCGTTGACGTCAGCGGCGGAGGCATTTTCATCCTCCCTGAGAGAGAGCACGATGGTCCTTAAGGGAAGCTCTGGAGAT----AAAGAAGACCCATCTC-----------------------------------------AGACCCAGAGGGTTCCCAGACTTATCCA--ACTTCTATCCTGTGCGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29067916 181 + 31377067 -CCC---CCTGCCAGGC-CGCCTCCCCACCCTG---CTGGCCTGCAGCACCGACCGAGGCGTTGACATCGGCCACGGAGGCATTTTCTTCTTCACTGAGCCAGAGCTGGATGAGCCTCACCGGAAGCCCTGGAAACGGGAGACG-----------------------------------------------------CAGGCCACGGTCACCCCCGGC---CCCGGGGAGGTGGCTGGGC-CTGTC i canFam3.chr33 C 0 I 113 e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=27252.000000 s hg38.chr3_KI270935v1_alt 123019 14 + 197351 CAAGTTGACTGCTC s ponAbe2.chr3 199780495 13 + 202140232 CAGGCCGA-TGCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120860275 14 + 123690457 CAGGCCGACTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32269 14 + 111706 CAGGGCAACGGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67700 14 + 192460366 CAGGGCAACGGCTC i macFas5.chr2 C 0 I 7 s papAnu2.chr2 64882 14 - 187378091 CAGGGCGACGGCTC i papAnu2.chr2 C 0 I 7 s chlSab2.chr15 416292 14 - 91754291 CAGGGCGACGGCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 935939 14 - 74750902 CAGGGAGACTACTC i calJac3.chr17 C 0 I 7 s mm10.chr16 65430184 14 - 98207768 CAGAGAGACAGCTC i mm10.chr16 C 0 C 0 e canFam3.chr33 29068097 113 + 31377067 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=6485.000000 s hg38.chr3_KI270935v1_alt 123033 5 + 197351 CATTC s ponAbe2.chr3 199780508 5 + 202140232 CATTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120860289 5 + 123690457 CATTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32283 5 + 111706 CATTC i rheMac3.chrUn_JH291127 C 0 I 2 s chlSab2.chr15 416306 5 - 91754291 CATTC i chlSab2.chr15 C 0 I 2 s mm10.chr16 65430198 5 - 98207768 CATCC i mm10.chr16 C 0 I 1 e canFam3.chr33 29068097 113 + 31377067 I e calJac3.chr17 935953 7 - 74750902 I e macFas5.chr2 67714 7 + 192460366 I e papAnu2.chr2 64896 7 - 187378091 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=42768.000000 s hg38.chr3_KI270935v1_alt 123038 22 + 197351 CAGTGACA-GAAGGTCACTGAAG s ponAbe2.chr3 199780513 23 + 202140232 CCCTTTTACGAAGGTCACTGAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120860294 22 + 123690457 CAGTGACA-GAAGGTCACTGAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32290 19 + 111706 CAGTGACA----GGTCACTGAAG i rheMac3.chrUn_JH291127 I 2 C 0 s macFas5.chr2 67721 19 + 192460366 CAGTGACA----GGTCACTGAAG i macFas5.chr2 I 7 C 0 s papAnu2.chr2 64903 19 - 187378091 CAGTGACA----GGTCACTGAAG i papAnu2.chr2 I 7 C 0 s chlSab2.chr15 416313 19 - 91754291 CAGTGACA----GGTCACTGAAG i chlSab2.chr15 I 2 C 0 s calJac3.chr17 935960 22 - 74750902 CAGTGACA-GAAGGTCACTGAAG i calJac3.chr17 I 7 C 0 s mm10.chr16 65430204 20 - 98207768 CCATGGCA---AGGTCACTGAAA i mm10.chr16 I 1 I 221 e canFam3.chr33 29068097 113 + 31377067 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=47326.000000 s hg38.chr3_KI270935v1_alt 123060 24 + 197351 AAACCGGGAGAAGTGGCCCTCACC s ponAbe2.chr3 199780536 24 + 202140232 AAACCGGGAGAAGTGGCCCTCACC i ponAbe2.chr3 C 0 M 1691 s nomLeu3.chr11 120860316 24 + 123690457 AAACCGGGAGAAGTGGCCCTCACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32309 23 + 111706 ACACC-GGAGAAGTGGCCCTCACC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 67740 23 + 192460366 ACACC-GGAGAAGTGGCCCTCACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64922 23 - 187378091 ACACC-GGAGAAGTGGCCCTCACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416332 23 - 91754291 ACACC-GGAGAAGTGGCCCTCACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 935982 24 - 74750902 AAATCAGTACAAGTGACCCTCACC i calJac3.chr17 C 0 T 56 e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=7849.000000 s hg38.chr3_KI270935v1_alt 123084 15 + 197351 CTA-----CATTCCACAGTG s nomLeu3.chr11 120860340 15 + 123690457 CTA-----CATTCCACAGTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67763 20 + 192460366 CTAGCGCTCACTCCACTATG i macFas5.chr2 C 0 T 69 s papAnu2.chr2 64945 20 - 187378091 CTAGCGCTCACTCCACTATG i papAnu2.chr2 C 0 T 69 s calJac3.chr17 935950 15 - 74750902 CTC-----CATTCCACAGTG i calJac3.chr17 T 56 C 0 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=10752.000000 s hg38.chr3_KI270935v1_alt 123099 44 + 197351 ACAGAAGGTCGCTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA s nomLeu3.chr11 120860355 44 + 123690457 ACAGAAGGTCACTGAAGAAACCGGGAGAAGTGGCCCTCACCCTA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 935965 44 - 74750902 ACAGAAGGTCACTGAAGAAATCAGTACAAGTGACCCTCACCCTA i calJac3.chr17 C 0 T 56 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e macFas5.chr2 67783 69 + 192460366 T e papAnu2.chr2 64965 69 - 187378091 T e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=7067.000000 s hg38.chr3_KI270935v1_alt 123143 29 + 197351 CATTCCACAGTGACAGAAGGTCGCTGAGC s nomLeu3.chr11 120860399 29 + 123690457 CATTCCACAGTGACAGAAGGTCGCTGACC i nomLeu3.chr11 C 0 I 103 s calJac3.chr17 935953 29 - 74750902 CATTCCACAGTGACAGAAGGTCACTGAAG i calJac3.chr17 T 56 C 0 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e macFas5.chr2 67783 69 + 192460366 T e papAnu2.chr2 64965 69 - 187378091 T e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=6139.000000 s hg38.chr3_KI270935v1_alt 123172 27 + 197351 AAACCGGGAGAAGTGGCCCTCACCCTA s nomLeu3.chr11 120860531 27 + 123690457 AAACCGGGAGAAGTGGCCCTCACCCTA i nomLeu3.chr11 I 103 C 0 s calJac3.chr17 935982 27 - 74750902 AAATCAGTACAAGTGACCCTCACCCTA i calJac3.chr17 C 0 T 56 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e macFas5.chr2 67783 69 + 192460366 T e papAnu2.chr2 64965 69 - 187378091 T e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=15759.000000 s hg38.chr3_KI270935v1_alt 123199 23 + 197351 CATTCCACAGTGACAGAAGGTTG s nomLeu3.chr11 120860558 23 + 123690457 CATTCCACAGTGACAGAAGGTCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67714 20 + 192460366 CATTCCACAGTGAC---AGGTCA i macFas5.chr2 T 69 C 0 s papAnu2.chr2 64896 20 - 187378091 CATTCCACAGTGAC---AGGTCA i papAnu2.chr2 T 69 C 0 s calJac3.chr17 935953 23 - 74750902 CATTCCACAGTGACAGAAGGTCA i calJac3.chr17 T 56 C 0 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e mm10.chr16 65430224 221 - 98207768 I e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=18629.000000 s hg38.chr3_KI270935v1_alt 123222 30 + 197351 CTGAAGAAACCGGGAGAAGTGGCCCTCACG- s nomLeu3.chr11 120860581 30 + 123690457 CTGAAGAAACCGGGAGAAGTGGCCCTCACC- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67734 29 + 192460366 CTGAAGACACC-GGAGAAGTGGCCCTCACC- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 64916 29 - 187378091 CTGAAGACACC-GGAGAAGTGGCCCTCACC- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 935976 30 - 74750902 CTGAAGAAATCAGTACAAGTGACCCTCACC- i calJac3.chr17 C 0 C 0 s mm10.chr16 65430445 29 - 98207768 cttaagagtttgaagcaaat--ctctctcca i mm10.chr16 I 221 C 0 e rheMac3.chrUn_JH291127 32332 0 + 111706 C e canFam3.chr33 29068097 113 + 31377067 I e chlSab2.chr15 416355 0 - 91754291 C e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=346720.000000 s hg38.chr3_KI270935v1_alt 123252 209 + 197351 CTAGGGCTCACTCCACTATGCTCCGGGCCTCCCCAGCGCTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCGTGGTCCTTGCCGTGACAGCTTGCCTCGCCAGCTCCCATAGCCCGCACCTTACACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT-----------GACCCCAGA-----GCTTCCTCATC s nomLeu3.chr11 120860611 209 + 123690457 CTAGCGCTCACTCCACTATGCTCCGGACCTCCCCGACGCTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCATAGGCCACACAGGCCCATGGTCCTTGCCATGACAGCTTTCCTCGCCAGCTCCCATAGCCTGCACCTTACACCGTCCCAGAGAAATCTGGAGCTCTGTCCTGT-----------GACCCCAGA-----GCTTCCTCATC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32332 206 + 111706 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCGCTCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCGCCAGCTCCTACAGCCCGCACCTTACACCATCCCAGAGAAATCCGGAG--CTGTCCTGT-----------GACCCCAGA-----GCTTCCCCATC i rheMac3.chrUn_JH291127 C 0 I 425 s macFas5.chr2 67763 206 + 192460366 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCGCTCATCTCACTGAGCCAGCTGTGAAGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCGCCAGCTCCTACAGCCCGCACCTTACACCATCCCAGAGAAATCCGGAG--CTGTCCTGT-----------GACCCCAGA-----GCTTCCCCATC i macFas5.chr2 C 0 I 16 s papAnu2.chr2 64945 208 - 187378091 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCGCTCATCTCACGGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTCCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTCCCCAGCTCCTACAGCCCGCACCTTACACCATCCCAGAGAAATCTGGAGCTCTGTCCTGT-----------GACCCCAGA-----GCTTCCCCATC i papAnu2.chr2 C 0 I 16 s chlSab2.chr15 416355 206 - 91754291 CTAGCGCTCACTCCACTATGCCCCGGGCCT-CCGGCCGCTCATCTCACTGAGCCAGCTGTGAGGTC------------------------------------------------------------------------TCTGCCTCCGTCCTTTCTCCACAGGCCACACAGCCCCGTGGTCCTTGCTGTGACAGCTGCCCTGGCCAGCTCCTACAGCCCGCACCTTACACCATCCCAGAGAAATCCGGAG--CTGTCCTGT-----------GACCCCAGA-----GTTTCCCCATC i chlSab2.chr15 C 0 I 16 s calJac3.chr17 936006 207 - 74750902 CTAGTGCTCATTCAGTTGTGGTTAGGGCCTCCCTGACTGTCTTCTCCCTGAGCCAGCCATGAGGTC------------------------------------------------------------------------TCTGCCTCCACCCTTCCTCAGAAGGTC-CACAGGCCCACGGTCCTTGCCGTGACAGCTGCCCTCGCCAGCTCCCGCAGCCCACACCTTACCCCATCCCAGAGAAACCTGGAGCTCTGTGCTGT-----------G-TCCCAGA-----GCTTCCCCATC i calJac3.chr17 C 0 C 0 s mm10.chr16 65430474 284 - 98207768 ctgaaatcccctc---tctgtgctggaact-tctacctccctatttcctgcctaagctaggaggccaacagcgtcttattgacacttgatgcttccacacgatgcacaagagattctctctacaCTGCCGAGGCTTCTTCTGCCTCCGTCTGTCCTCTGCAGATGACCAAGGCCGGTGGTTCACACTGGGAGAGCTCTCCTCATCATGTCCTCCAGCCCCAAACT--CACCACCTCAG-----TTCTGAT--CTGTGCCTTTGAGGAACTTGGACCTCAGACACTGGTTTTCCCATC i mm10.chr16 C 0 C 0 e canFam3.chr33 29068097 113 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=23236.000000 s hg38.chr3_KI270935v1_alt 123461 23 + 197351 TTCCCCAAAGGTGGGCGGAGTGC s nomLeu3.chr11 120860820 23 + 123690457 TTCTCCAAAGGTGGGCGGAGTGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 67985 23 + 192460366 TTCCCCAAAGGTGGGAGGAGTGT i macFas5.chr2 I 16 C 0 s papAnu2.chr2 65169 23 - 187378091 TTCCCCAAaggtgggaggagtgt i papAnu2.chr2 I 16 C 0 s chlSab2.chr15 416577 23 - 91754291 TTCCCCAAAGGTGGGAGGAGCGT i chlSab2.chr15 I 16 I 294 s calJac3.chr17 936213 15 - 74750902 ATCCCCAAAGGTGGG-------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65430758 23 - 98207768 ATCCCCATATACGAGAGACGACT i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e canFam3.chr33 29068097 113 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=-4685.000000 s hg38.chr3_KI270935v1_alt 123484 32 + 197351 GGGGGTGAGAGGGTGGGGCCCAGGAA------------------------------------------------------------------------------------------------GAGTGC- s nomLeu3.chr11 120860843 32 + 123690457 GGAGGCAAGAGGGTGGGGCCCGGGAG------------------------------------------------------------------------------------------------GAGTGC- i nomLeu3.chr11 C 0 I 9614 s macFas5.chr2 68008 128 + 192460366 GGAGGTGAGAGGGCGGGGCCCGGGTGGGGCGCAGGGGTAAGAGGGCGGAGCCTGGGTGGGGTGCGGGGGTAAGAAGGTGGAGCCTGGCTGGGGTGCGAGGGTGAGAGGGCGGGGCCTGGGTAGAGTGT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65192 32 - 187378091 ggaggtgagagggcggggcccgggtg------------------------------------------------------------------------------------------------gggcac- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416894 32 - 91754291 GGGGGTGAGAGGGCGGGGCCTGGGTG------------------------------------------------------------------------------------------------GAGTGT- i chlSab2.chr15 I 294 C 0 s calJac3.chr17 936228 8 - 74750902 ------AAGAGTGC------------------------------------------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65430781 18 - 98207768 ---------------GGGGCTGGCAG------------------------------------------------------------------------------------------------GAGCAGT i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e canFam3.chr33 29068097 113 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=294.000000 s hg38.chr3_KI270935v1_alt 123516 1 + 197351 G s nomLeu3.chr11 120870489 1 + 123690457 A i nomLeu3.chr11 I 9614 C 0 s macFas5.chr2 68136 1 + 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65224 1 - 187378091 a i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416926 1 - 91754291 G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 936236 1 - 74750902 A i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e mm10.chr16 65430799 0 - 98207768 C e canFam3.chr33 29068097 113 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M e panTro4.chr3_GL389630_random 85947 840 + 103936 I a score=14387.000000 s hg38.chr3_KI270935v1_alt 123517 10 + 197351 GGGGTGAGAG- s panTro4.chr3_GL389630_random 86787 10 + 103936 GGGGTGAGAG- i panTro4.chr3_GL389630_random I 840 C 0 s nomLeu3.chr11 120870490 10 + 123690457 GGGGTGAGAG- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68137 10 + 192460366 GAGGTGAGAG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65225 10 - 187378091 ggggtgagag- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416927 10 - 91754291 GGGGTGAGAG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 936237 11 - 74750902 ATGGTGAGGGT i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e mm10.chr16 65430799 0 - 98207768 C e canFam3.chr33 29068097 113 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M a score=15416.000000 s hg38.chr3_KI270935v1_alt 123527 7 + 197351 GGCGGGG s panTro4.chr3_GL389630_random 86797 7 + 103936 GGCGGGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120870500 7 + 123690457 GGCGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68147 7 + 192460366 GGCGGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65235 7 - 187378091 ggcggag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 416937 7 - 91754291 GGCGGGG i chlSab2.chr15 C 0 I 186 s calJac3.chr17 936248 7 - 74750902 GGCAGGG i calJac3.chr17 C 0 I 2 s canFam3.chr33 29068210 7 + 31377067 GGCCAGG i canFam3.chr33 I 113 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e mm10.chr16 65430799 0 - 98207768 C e ponAbe2.chr3 199780560 1691 + 202140232 M a score=-4520.000000 s hg38.chr3_KI270935v1_alt 123534 3 + 197351 TCT-- s panTro4.chr3_GL389630_random 86804 3 + 103936 TCT-- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120870507 3 + 123690457 TCT-- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68154 1 + 192460366 --C-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65242 1 - 187378091 --c-- i papAnu2.chr2 C 0 I 317 s calJac3.chr17 936257 1 - 74750902 T---- i calJac3.chr17 I 2 C 0 s canFam3.chr33 29068217 3 + 31377067 --CGG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e mm10.chr16 65430799 0 - 98207768 C e chlSab2.chr15 416944 186 - 91754291 I e ponAbe2.chr3 199780560 1691 + 202140232 M a score=2499.000000 s hg38.chr3_KI270935v1_alt 123537 2 + 197351 CT s panTro4.chr3_GL389630_random 86807 2 + 103936 CT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120870510 2 + 123690457 CT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 68155 2 + 192460366 CT i macFas5.chr2 C 0 I 22 s calJac3.chr17 936258 2 - 74750902 CT i calJac3.chr17 C 0 C 0 s mm10.chr16 65430799 1 - 98207768 -T i mm10.chr16 C 0 C 0 s canFam3.chr33 29068220 2 + 31377067 CC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 32538 425 + 111706 I e chlSab2.chr15 416944 186 - 91754291 I e papAnu2.chr2 65243 317 - 187378091 I e ponAbe2.chr3 199780560 1691 + 202140232 M a score=5912.000000 s hg38.chr3_KI270935v1_alt 123539 5 + 197351 GGCG-G s panTro4.chr3_GL389630_random 86809 6 + 103936 GGCCCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120870512 5 + 123690457 GGCA-G i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32963 5 + 111706 GGCG-G i rheMac3.chrUn_JH291127 I 425 C 0 s macFas5.chr2 68179 5 + 192460366 GGCG-G i macFas5.chr2 I 22 C 0 s chlSab2.chr15 417130 5 - 91754291 GGCG-G i chlSab2.chr15 I 186 C 0 s calJac3.chr17 936260 5 - 74750902 GGTG-G i calJac3.chr17 C 0 C 0 s mm10.chr16 65430800 5 - 98207768 AGCC-A i mm10.chr16 C 0 C 0 s canFam3.chr33 29068222 5 + 31377067 GGTG-G i canFam3.chr33 C 0 C 0 e papAnu2.chr2 65243 317 - 187378091 I e ponAbe2.chr3 199780560 1691 + 202140232 M a score=1329816.000000 s hg38.chr3_KI270935v1_alt 123544 500 + 197351 TACCTAGGTTGACAGTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCT-GGGGGGCAGGTGCACATGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCTGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGTCAGCAGCAGC-GCGCA-GGGCAGCAGAGGG-----------------ACGGCC---CAGCCCGTGGAAACCCGCTCCGGGACA----GGCTTGCTTTC----CCC-----------------CAGTGTTCCACTTCGGGCCACTCGGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAGGGCAACCCCTTTCCCCGGCCAGACAGGTATTCTTCCACTTTTGTGGAGGGACTGGAGTGTTTCTCAGACCCTCTGCTTCAGAAAGGACCCCGAAGGCTGGCAGAGGAGGGGCCCCCAGCTGGCTTTCCTCACGCCCTCCCCTCTCACGTCC s panTro4.chr3_GL389630_random 86815 499 + 103936 TACCTAGGTTGACAGT-GGACTGAAGTTGTTCCCAGCCAGGAAGCAGCGGCTGTCAGTGAAGGCCCGGGGGGCAGGTGCACGTGGGCTGACAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGAC-CAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGTCAGCAGCAGC-GCGCT-GGGCAGCAGAGGG-----------------ACAGCC---CAGCCCGTGGAAACCCGCTCCGGGACA----GGCTTGCTTTC----CCC-----------------CAGTGTTCCGCTTCGGGCCACTCGGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGAGTTTCTCTGCAGGGCAACCCCTTTCCCCGGCCAGACAGGTATTCTTCCACTTCTGTGGAGGGACTGGAGTGTTTCTCAGACCCTCTGCTTCAGAAAGGACCCCGAAGGCTGGCAGAGGAGGGGCCCCCAGCTGGCTTTCCTCATGCCCTCCTCTCTCACGTCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120870517 483 + 123690457 TACCTAGGTTGACAGTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTGTCGGTGAAGGCC-GGGGGACAGATGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAAAGAGCTCCCCAGAGCTGCAGAGTGAGTAGGGAGGT---CAGCAGC-GCGCT-GGGGAGCAGAGGG-----------------ACAGCC---CAGCCCGTGGAAACCCGCTCCGGGACA----GGCCTGCTTTC---------------------------TTTCCC--------CCACTCGGAACCCCAAACCATCCTTCCCTG--CTTTTCCAGGCGTTTCTCTGCAGGGCAACCCCTTTCCCTGGCCAGGCAGGTATTCTTCCACTTCTGTGGAGGGACTGGAGTGTGTCTCAGACCCTCTGCTTCAGAAAGGACCCCGAAGGCTGGCAGAGGAGGGGCCCCCAGCTGGCTTTCCTCACGCCCTCCCCTCTCACGTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 32968 505 + 111706 TACCTAGGTGGACAGTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCC-GGGGGGCAAGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGTCAGCAGCAGC-GCACTGGGGCAGCGGAGGG-----------------AGCGCC---CAGCCCGTGGAAACCCGCTCTGGGACA----GGCCTGCTTTCTTTCCCC-----------------CAGTGTTCTGCTGTGGGCCACTCAGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTTCCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTCAGAAAGGACCCTGAAGGCTGGCAGAGGAGGGGCCCCCAGCCGGCTTTCCTCACGCCCTCGCCTCTCACTTCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 68184 505 + 192460366 TACCTAGGTGGACAGTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCC-GGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGTCAGCAGCAGC-GCACTGGGGCAGCGGAGGG-----------------AGAGCC---CAGCCCGTGGAAACCCGCTCTGGGACA----GGCCTGCTTTCTTTCCCC-----------------CAGTGTTCTGCTGTGGGCCACTCAGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTTCCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTCAGAAAGGACCCTGAAGGCTGGCAGAGGAGGGGCCCCCAGCCGGCTTTCCTCACGCCCTCGCCTCTCACTTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 65560 505 - 187378091 tACCTAGGTGGACAGTTGGACTGAAGTTGTTCCcagccaggaagcagaggctatCGGTGAAGGCC-GGGGGGCAGGTGCACGTCGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGTCAGCAGCAGC-GCACTGGGGCAGCGGAGGG-----------------AGAGCC---CAGCCCGTGGAAACCCGCTCTGGGACA----GGCTTGCTTTCTTTCCCC-----------------CAGCGTTCTGCTGTGGGCCACTCAGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGCGTTTCTCTGCAAGGCAACCCCTTTCCTCGACCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGTTTCTCAGGCCTTCTGCTTCAGAAAGGACCCTGAAGGCTGGCAGAGGAGGGGCCCCCAGCCGGCTTTCCTCACGCCCTCGCCTCTCACTTCC i papAnu2.chr2 I 317 C 0 s chlSab2.chr15 417135 505 - 91754291 TACCTAGGTGGACAGTTGGACTGAAGTTGTTCCCAGCCAGGAAGCAGAGGCTATCGGTGAAGGCC-GGGGGGCAGGTGCACGTGGGCTGGCAGCCCAGAGTCTGGGAGATGTAGCAGCGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACACAGGAGAGAGCTCCCCAGAGCTGCAGAGTGAGCAGGGAGGTCAGCAGCAGC-GCACCGGGGCAGCGGAGGG-----------------AGAGCC---CAGCCCGTGGAAACCTGCTCCGGGACA----GGCCTGCTTTCTTTCCCC-----------------CAGTGTTCTGCTGTGGGCCACTCAGAACCCCAAACCATCCTTCCCCC--CTTTTCCAGGTGTTTCTCTGCAGGGCAACCCCTTTCCTCGGCCAGGCAGGTATTCTTCCACTTCTAGAGAGGGACTGGAGTGCTTCTCACACCTTCTGCTTCAGAAAGGACCCTGAATGCTGGCAGAGGAGGGGCCCCCAGCCGGCTTTCCTCACGCCCTCGCCTCTCACTTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 936265 486 - 74750902 TACCTAGGCGGACAGTCGGAGTGAAGTTGTTTCCAGCCAGGAGGCAGCGGCTATCGGTGAAGGCT-GGGGGGCAGGTGCACGAGGGCCGGCAGCCCAGAGCCTCAGAGATATAGCAGTGGCCTTGATTGTAGCAGTAATTCACAGGGCAGGACTGGTTCCGACAGAGGGAAGAGCTGCCCAGAGCTGCAGAGGGAGCAGGGAGGTCAGCAGCAGCAGC----AGGCAGCAGAGGG-----------------AGAGCCCAGCAGCCGGTGGAAACCTGCTCTGGGACA----GGCCTGGTTTCTTTCCCG-----------------CAGTGTTCTGCTGTGGGCCAC----------------TCCTTCTCCC--CTTTTCCAGGCATT--TCTGCAGGGAAACCCCCTTCCTCAGCCAGGCAGGCATTCGTCCACTTCTGCAGCAGGAGTGGAGTGTTTCTCAGACCCTCTGCTTCAGAAAGGACCCGGAAGGCTGGCAGATGA-GGGTCCCCAGCCAGCTTTCCTCATACTCTCCCCTCTCACTTCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65430805 529 - 98207768 TACCCATAGAGATGGTGGGAGTGAAACTGTTCCCAGCCAGGAAGCAGCGGTTATCAGTGAAGGCA-GGGGGACAGGTGCAAGTGGGCTGGCAGCCTGGAGCCTCAGAGATGTCGCAATGGCCATTGTTATAGCAGTAATTCATGGGACAGGAACGGTTTGGGC------AGGAGTCCTCCAGAGCTGTAAAGGGAGAAGGGGAATCAGCCACGCC-GCGACGAGGCAGCTGATGGGCAATGAGCCGCCTGTTGGAGCC---TAACCCTAGGATATCT--TCTAGGATATCTTGTTTGGTTCTCCCTCCCCGACAATGCTTGCCCAATCTGTATTGTGCTC---ACTACTCTGAACCCCACACTGCCTTCCCCACATCTTCCCCAAGCATGTCTCTGTAAAGCAA-CCGTTCTGTCTGCCAGGTGAGTGGTTTTTCCCCTCTGCACAGGGCATGGCTTGCTGACCAGAGCATCCTCGCCAGAGAGGGACCCAGAAGCTGGTGGGAGA-AAGATGTCAGTCTGCTTCCTCC---CCTTCTCCCCTCACATCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29068227 440 + 31377067 TACCTGCAGGGGCGGCCGGAGTGAAGGGGTTCCCCGCCACCAGGCAGCGGCTGTCCGAGAAGGCG-GGGTGGCAGGTGCAGGCCGGCTGGCAGTCCCTCTCGGGGGACACGTGGCAGTGGCCCCGGTTGTAGCAGTAACTGGCGGGGCAGGACCGGTTCCCACAGTGCAGCCCGGGGGCCAGAGCTGCGGAGGGAGGAGG--------CAGGAG--GCA---GGGAGGCCCAGGA-----------------TC--CC---CAGCCCAGGGG---CCCCCCCAGGACG----CTCGGGCCCCCCAAGCCC-----------------TCTCGGCCTGCCT--AGCAGTCCCCGACCCCTGAAGTCTCCCCCTCC--CTTCTCCTGG---TCCCCTGCC---CGAAGCCTTTCCTCTGC---------------------------------------ATTTAGCAGACCTGCTGCAGCGGGAAGGGACCCCAAGGCC-GCGGAGTGGGGAGCCCCAGCCTGCTTGTCTCGCCCCCTCCTTCCTCCCGCCC i canFam3.chr33 C 0 I 151 e ponAbe2.chr3 199780560 1691 + 202140232 M a score=1178122.000000 s hg38.chr3_KI270935v1_alt 124044 567 + 197351 ATCTCCTTTTCTGCCTTTATAAAAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGGTGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA-GACTCTGGTGACTCAGAGCGGGAGGAACAGATGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCCCAGGGATCCCGAGGACCCAGCTTGCCCGGTTCTCTGGCGGCTGCTGAAGTCTCCTCC-----CCAAACCATCTTCAGTCTTTCGCCCGGGGCTCCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCCCCTCCCCTATGCCTGTACAACCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCAGGCCTGCCTAGATTTCCCATACCTGCCTAGATGATTTCCCACACCTGCCTAGATTTCCCACACCTG-------------CCTAGATTGAGCATTCTAAAGATCTGC s panTro4.chr3_GL389630_random 87314 526 + 103936 ATCTCCTTTTCTGCCTTTATAAAAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTGTAGATTTTATTTGGGTGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA-GACTCTGGTGGCTCAGAGCGGGAGGAACAGATGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTCGTGAGATGCAGAGATCCTGAGCCTCGTGTCTCTGAAGATCCCCAGGGATCCCGAGGACCCAGCTTGCCCGGTTCCCTGGCGGCTGCTGAAGTCTCCTCC-----CCAAACCATCTTCAGTCTTTCGCCCCGGGCTTCCCCCATCAATGCCTCAGGGATGCCC-AGCCCCGTCCCCTCCCCTATGCCTGTACAACCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCAGG-----------------------------------------CCTGCCTAGATTTCCCACACCTG-------------CCTAGATTGAGCATTCTAAAGATCTGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120871000 451 + 123690457 ATCTCCTTTTCTGCCTTTATAACAGCTGCGGTTCTACCCACTCTGGCCTCGGCTCTGAA--CGCAGTGATCTGTAGATTTTATTTGGGTGCCTTAGGGGGCTTGGTAAAGGCCTCGCTGTGATCTCCCTCATCA-GACTCTGGTGGCTCAGAGCGGGAGGAACAGATGGCTGGG--AAGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCA-----------------------------------------------------------------------------CCGAGGACCCAGCTTGCCCGGTTCCCTGG-AGCTGCTGAAGTCTCCTCCCCTGGCCAAACCATCTTCAGTCTTTTGCCCGGGGTTCCCCCCATCAATGCCTCAGGGATGCTC-AGCCCCGTCCCCTCCGCTATGCCTGTACAACCTCTTCTCCTTCAGCCCCACACCATCCACCACCCCCTTTCCAGG-----------------------------------------CCTGCCTAGATTTCCCATACCTG-------------CCTAGATTGAGCATTCTAAAGATTTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 33473 563 + 111706 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGACCTCTAGATTTTATTTGGGTGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA-GACTCTGATGGCTCAGAGCGGGAGGAACAGGTGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCCCAGGGAGCCCGAGGAGCCAGCTTGCCCGGTTCCCTGGCCGCTGCTGAAGTCTCCTCCCCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAACCTCTTCTCCTTCAGCACCACACCATCTGCCACCCCCTTTCCAGGCCTA-------------------CCTA---GATTTCCCGTACCTGCCTAGATTTCCCATACCTGCCTAGATTACCTACCTAGATTGTGCATTCTAAAGGCTTGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 68689 582 + 192460366 GTCTCCTCTTCTGCGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGACCTCTAGATTTTATTTGGGTGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA-GACTCTGATGGCTCAGAGCGGGAGGAACAGGTGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCCCAGGGAGCCCGAGGAGCCAGCTTGCCCGGTTCCCTGGCCGCTGCTGAAGTCTCCTCCCCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-AGCCCCGTCCCCTCCCCTATGCCTGTACAACCTCTTCTCCTTCAGCACCACACCATCTGCCACCCCCTTTCCAGGCCTACCTAGATTTCCCGTACCTGCCTA---GATTTCCCGTACCTGCCTAGATTTCCCATACCTGCCTAGATTACCTACCTAGATTGTGCATTCTAAAGGCTTGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 66065 582 - 187378091 GTCTCCTCTTCTACGTTTATAAAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGGTGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA-GACTCTGATGGCTCAGAGCGGGAGGAACAGATGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCAGATCCCCACACCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCCCAGGGAGCCCGAGGAGCCAGCTTGCCCGGTTCCCTGGCTGCTGCTGAAGTCTCCTCCCCTGGGCAGActattttcagtcttttgccCAGGGTTTCCCCCATCAATGCCTCAGGGATGCTT-agccccatcccctcccctaTGCCTGTACAACCTCTTCTCCTTCAGCACCACACCATCCACCACCCCCTTTCCAGGCCTACCTAGATTTCCCATACCTGCCTA---GATTTCCCATACCTGCCTAGATTTCCCATACCTGCCTAGATTACCTACCTAGATTGCACATTCTAAAGGCTTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 417640 563 - 91754291 GTCTCCTCTTCTGCATTTATAGAATCTGTGGTTCTACCCACTCTGGCCTCGGCTCTGAAGGCACAGTGATCTCTAGATTTTATTTGGGTGCCTAAGGGGGCTTGGTAAAGGCCTTGCTGTGATCTCCCTCATCA-GACTCTGGTGGCTCGGAGCGGGAGGAACAGGTGGCTGGG--AGGACTCAAAGGGAAAATCAGGCACCTTTGCTGCCGGATCCCCACGCCAGCCCCTCCAAACGTCCTGACTTGTGAGATGCAGAGATCCTGGGCCTCGTGTCTCTGAAGACCCCCAAGGTGCCCGAGGAGGCAGCTTGCCCAGTTCCCTGACCGCTGCTGAAGTCTCCTCCCCTGGGCAGACCATCTTCAGTCTTTTGCCCAGGGTGTCCCCCATCAATGCCTCAGGGATGCTC-AGCCCCGTCCCCTCCCCTATGCCTGTACAACCTCTTCTCCTTCAGCACCACACCCTCTGCCACCCCCTTTCCAGACCTG-------------------CCTA---GATTTCCCATACCTGCCTACATTTCCCATACCTGCCTAGATTACCTACCTAGATTGAGCATTCTAAAGGCTTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 936751 509 - 74750902 ATCTCCTTTTCTGCCTTTATAGAAGCTGCAGTTCCACCCACTCTGGCCTTGGCTCTGAAGACACAGTGATCTCTAGATTTTATTTGGGTGCCTTAGGGGGCTTGGTAAAGGCCTCCCTGTGACCTCCCTCATC------------------AGCGGGAGGGACAGATGGCTGGG--AGGACTCAAAGGGAAAATGAGGCACCTTTACTGCTGGATCCCTGTGCCAGCACCCACAAATGTCCTGATTTGTGAGATGCAGAGA-CCTGGGCCCCGTGTCTCTGAAGACGCCTAGAGAGCCCGAGGACCCAGCTTTCCCGGTTCGCGGG---CCACTGAAGTCTCCTCTTTTCACCAGATCATCTTCGGTCTTTTGCCTGGGGTTTTCCCCATTAATGTCTCAGGGATGCTG-AGTGCTATCCCCTCCCCTGTGCCTGTACAACCTCTTTTCCTTCAGCCCCACACCACCTACCACCCCCTTTTCAAG-----------------------------------------CCTACCTACATTTCCCATACTGA-------------CCTAGACTGAGCATTCT-AAGGCTTGC i calJac3.chr17 C 0 C 0 s mm10.chr16 65431334 444 - 98207768 GTCTCCT----------------------GGTCCCACCCA----------------GAAGGCGC--CAGTCTCCTGGTTGTGTTTGGCAGCCTTAGAGGATT--GGAAAGGTTGCACTGTCACCTCTGTCATGGTGACAACACTGGCTCAGAGGAAGAGGAGCAGACGCATAGGAAAGAACCCAAAGGAAAACTGAGGTTCCG--------AGGTCCCCATAGCAACACCTCCAGATTCTCCAACTTGTCAAAGGCAGAGCCCCTGAGCACCGTGTTTCTGAAGATGCCCAGGTA-CCTGAGAGCCTAGCTAGCCT-------------CTGATCAATTAGCCTTATC------------CATCAGTCTTT--CCCTATGTTTTCTCCAGCAGGGTCTTGAGGCTGCTCTGGTCCAGGCTCATCCTCGGCTTCTGCA-----TCCTCTCCTGCATCCCCACACTACCTCCCACCCCTTTCTAAGT-----------------------------------------CCTCC--------CCCATTACAGCTT----------CTTATCATGAG---GTAAAAGACACAT i mm10.chr16 C 0 C 0 e canFam3.chr33 29068667 151 + 31377067 I e ponAbe2.chr3 199780560 1691 + 202140232 M a score=466276.000000 s hg38.chr3_KI270935v1_alt 124611 162 + 197351 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCTGTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCCTGCTCCAGGCCCTGTTCCCGGCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAC s panTro4.chr3_GL389630_random 87840 162 + 103936 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCCGTCTACACCCTTGAGCTATCAGCTGCTCCCAGAAGCGCCTGCTCCAGGCCCTGTTCCCGGCTCACCCGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120871451 162 + 123690457 TGGAAAAAGGAGAGAAATGGTTTGCCTTTGGCTGTCTACACCCTTGAGCTGTCAGCTGCTCCCAGAAGTGCCTCCTCCAGGCCCTGTTCCCGGCTCACCGGCACAGTGCCGCCCATCCCCAGTCAGGTTTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34036 162 + 111706 CGGAGAAGGGAGAGAAATAGTTTGCCTTTGGCTGTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGTCCCTCCTCCAGGCCCTGTTCCCGGCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69271 162 + 192460366 CGGAGAAGGGAGAGAAATAGTTTGCCTTTGGCTGTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGTCCCTCCTCCAGGCCCTGTTCCCGGCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTATGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 66647 162 - 187378091 cggagaagggagagaaatggTTTGCCTTTGGCTGTCCACACCCTTGAGCTGTGAGCTGCTCCCAGAAGCCCCTCCTCCAGGCCCTGTTCCCGGCTCACCAGCACAGTGCCGTCCATCCCCAGTCAGGTGTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418203 160 - 91754291 CGGAAAAGGGAGGGAAATGGTTTGCCTTTGG-TGTCTACAGCCTTGAGCTGTGAGCTGCTCCCAGAAGCCCCTCCTCCAGG-CCTGTTCCCGGCTCACCAGCGCAGTGCCGCCCATCCCCAGTCAGGTGTGGAGGGCAGGCCCCGCAGCCCTTCCCAGGAAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937260 162 - 74750902 TGGAAAAGGGAGAGAAAGAGATTACCTGTGGCTGTCACCACACTTGAGCTACCACCTGTCCCCAGATGTCCCTCCTCCAGGCCCTGCTCCCAGCTCACCGGCACAGTGCCGCCCATCCCCGGTCAGGTCTGGAGGGCAGGCCTCGCAGCCCTTCCCAGGAAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65431778 140 - 98207768 TGCTAAAGACAGAAA-----------------CACCAGGACCCTTGACCAATCACCTGGACCT-----CCTCTTGCCAGGGCCCTGTCCCACACTCACCTGCACAATGACGTCCATCTCCAGTTGTGTTTGGAGGGCAGGCCTCACAGCCCTTCCCAGGAAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29068818 159 + 31377067 TGGAGAAGGGAGACAAA-GGTTGGTCCCAGGCC--CCAGGCCCTCCCGGTGTCAACTGTCCCCAGGCCGTGCTCCTGCCAGGGCAGGTCCCCGCTTACCTGCACAGTGACGCCCGTCGCCCGTCAGGTGCGGGGGGCAGGCCTCGCAGCCCCTCCCGGGGAC i canFam3.chr33 I 151 C 0 e ponAbe2.chr3 199780560 1691 + 202140232 M a score=1342332.000000 s hg38.chr3_KI270935v1_alt 124773 406 + 197351 GCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGAGGGTTGCCGATCAC-GGGCGGCCAGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTGA--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----CCTGAGT-CATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTTGACCAGGCCGTGGGGCGGCAAGGCCCTGCCTAAAGCCACACGGTAGTCCTGCCCAGCTGGCCTCCCTGGGTCATTG-TTTACCCTGACCCCCTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT s panTro4.chr3_GL389630_random 88002 406 + 103936 GCAGTGGACACTCGGGAAGCACGGCTCCTCACAGGCATCCTCGGAGCCCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGAGGGTTGCCGATCAC-GGGCGGCCAGGAGACCAAACTGGGAAGGGCTTCTGGGTGTTTCTGA--CTGACCCCTTTGGCCTGAGAACCCGTGGAC----CCTGAGT-CATGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTTGACCAGGCCGTGGGGCGGCAAGGCCCTGCCTAAAGCCACACGGTAGTCCTGCCCAGTTGGCCTCCCTGGGTCATTG-TTTACCCTGACCCCCTGCCTGGC-CCTGCACCCGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199782261 406 + 202140232 GCAGTGGACTCTCGGGAAGCACTGCTCCTCACAGACATCCTATATGCACTGGCAGTATCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGAGGGTTGCTGATCAC-GGGTGGCCAGGAGACCAAACTGGGAAGGGCTTGTGGGTGTTTATGA--CTGACCCCTTTGGCTTGAGAACCCGTGGAC----CCTGAGT-CATGTCTCAGCCCCACCAGCACCTGCTGAGCACATTCCTGAACAGGCCGTGGGGCAGCAAGGCCCCGCCTAGAGCCACACGGTAGTCCTGCCCAGTTGGCCTCCCTGGGTCATTG-TTTACCCTAACCACCTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i ponAbe2.chr3 M 1691 C 0 s nomLeu3.chr11 120871613 409 + 123690457 GCAGCGGACACTCGGGAGGCACGGCTCCTCACAGGCATCCTCGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCAGCCACCTGGAGGAGGGTTGCTGATCAC-GGGCGGCCAGGAGACCAAACTGAGAAAGGCTTCTGGGTGTTTCTGACTCTGACCCCTTTGGCCTGAGAACCCGTGGAC----CCTGATT-TGTGTCTCAGCCCCACCAGCACCTGCTGAGCACCTTCTTGACCAGGCCGTGGGGCTGCAAGGTCCTGCCTAAAGCCACACAGTAGTCCTTCCCAGTTGGCCTCCCTGGGTCATTGTTTTACCCTGACCCCCTGCCTGGC-CCTGCACCGGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34198 406 + 111706 GCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGTGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGAAGGTTGCTGATCAC-GGGCGGCCAGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTGA--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGCCTGAGT-CATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTTGACCAGGCCCTGGGGCTGCAAGGC----CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTCATTA-TTTACTCCGACTCCTTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69433 406 + 192460366 GCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGTGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGAAGGTTGCTGATCAC-GGGCGGCCAGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTGA--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGCCTGAGT-CATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTTGACCAGGCCCTGGGGCTGCAAGGC----CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCTTCCCTGGTTCATTA-TTTACTCCGACTCCTTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 66809 406 - 187378091 GCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCCCGTCACACTTGCAGCCGGCCATCTGGAGGAAGGTTGCTGATCAC-GGGCGGCCAGGAGACCAAACTGGTAAGGGCTTCTGGCTGTCTCTGA--CTGACCCCTTTGGCCTGGGAACCCGTGGACCCTGCCTGAGT-CATGTCTCAGCTCCACCAGCACCTGGTGAGTATCTTCTTGACCAGGCCCTGGGGCTGCAAGGC----CCTAAAGCCACACGGTAGTCCTGCCCATTTGGCCTCCCTGGTTCATTA-TTTACCCCGACTCCTTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTCGCTCTTTGCCTGAAATCCTTTCTAGAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418363 410 - 91754291 GCAGCGGACACTCGGGAAGCACGGCTCCTCACAGGCGTCCTTGGAGCGCTCGCAGTAGCGGCCGAAGGTGCCCGCATCACACTTGCAGCCGGCCATCTGGAGGAAGGTTGCTGATCAC-AGGCGGCCAGGAGACCAAACCGGTAGGGGCTTCTGGGTGTTTCTGA--CTGACCCCTTTGGCCTGAGAACCCGTGGACCCTGCCTGAGT-CATGTCTCAGCTCCACCAGCACCTGGTGAGTACCTTCTTGACCAGGCCCTGGGGCTGCGAGGCCCTGCCTAAAGCCACACGGTGCTCCTGCCCATTTGGCCTCCCTGGTTCATTA-TTTACCCTGACTCCCTGCCTGGC-CCTGCACCAGGATCTCAGCCTCTTCCCTCTCACACTCTAGCTCTTTGCCTGAAATCCTTTCTAGAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937422 405 - 74750902 GCAGCTGACATTTGGAAAGCATGGCTCCTCACAGGCGTCCGCAGAGCGCTCGCAGTAGTGGCCGAAGGTGCCCCTGTCACACTTGCAGCTAGCCACCTGGAGAAGGGTTGCTGATCACAGGGTAGCCAGGAAGCCAAAGTAGTAAGGGCTTCTGGGTGTTTCTGA--CGGATCCCTCTGGCTTGAGAACCCGGGGAC------CGAGT-CATGTCTTAGTTCCTCCAGCACCTACTGAGCACCGTCTTGACCGTGCCTGGGGGCTGCAAGGCCCTGTTTAAAGCCACACGGCAGTGCTGCCCATCCGGCCTCCCTGGGTCATTG-TTTATGCTGACCCCCTGACTGGT-CCTGCAACAGGAGCTCAGCCTCTTCCCTCTCGCACTCTAGCTCCTTGCCTAAAATCCTTTCTAGAGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65431918 320 - 98207768 GCAGTTCACGTTAGGGAAGCATGGCTCATCACACGGGTCCTTGGAGCGTTCACACAAGCGGCCAAAGGTGTCCCCATCACACTTGCAGCTGGTCACCTGAATGACAGCAG--GGCTGC-TGGTGTCCA------CAAGCTG--AAGACCACCTGCC-----------CTGACACTTCTGTCATGAGAAGCCCCG--C--------------TGTCTCAGTCCCTCCAGCACC-----------GTCCTGAACAGGCC--AAGACTGTGAGTACCTTCCCAAAGCTACAC--------------------------------------------AATCCCCCGCCTGGC-CCTGTAGCAGGCTCTCAGCTTCGCCTCTCTCAGAGCATACCTCCTTCTCTGGAATCCTTGGTAGAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29068977 353 + 31377067 GCAGGCCACACCCGCGAAGCACGGCGCCTCGCACTGGTCCCTGGAGCGCTCGCAGTAGTGGCCAAAGGTGCTGGAGCCACACCTGCAGCGGGCCACCTGGA-ATGGGTGGCTGGTTACTGCGCAGCCGGGAGACCGACC----------------GTGTTTCTGCGCCCCCCACCCCGGGCCTGGGAACCCACAGAC----TCCGAGTCCCCGTCCCGATCCTGCCAGCACGTGCCGAGCGCCG----GAGCCCGCTGTGGTCCTGC---------TCCGA-----------------GCCCCCTGGGCCTCGCTGGACGGTTC-TCTCCCCGACCGCTCTGCCCGGTGCCAGCCCTGGGACCCCAGC-----------CGCACCACATCTCCTTGCCCGAACCCCTTCTTAGAGT i canFam3.chr33 C 0 I 4 a score=34537.000000 s hg38.chr3_KI270935v1_alt 125179 10 + 197351 AAGATGGGGG s panTro4.chr3_GL389630_random 88408 10 + 103936 AAGATGGGAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199782667 10 + 202140232 AAGATGGGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872022 10 + 123690457 AAGATGGGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34604 10 + 111706 AAGACAGGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69839 10 + 192460366 AAGACGGGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67215 10 - 187378091 AAGACGGGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418773 10 - 91754291 AAGACGGGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937827 10 - 74750902 AAGACAGGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65432238 10 - 98207768 AAGATAGGGG i mm10.chr16 C 0 I 468 e canFam3.chr33 29069330 4 + 31377067 I a score=128787.000000 s hg38.chr3_KI270935v1_alt 125189 68 + 197351 atgcatgaatgattgaa-gcatg----aatgaatg-aatgaatgtatccatgtatagatgtatgtatccatgta s panTro4.chr3_GL389630_random 88418 48 + 103936 atgcatgaatgattgaa-gc--------atgaatg-aatgaatgtatccatgtatag----------------a i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199782677 68 + 202140232 ATGCATGAATGATTGAA-GCATT----Aatgaatg-aatgaatgtatccgtgtatatatgtatgtatccatgta i ponAbe2.chr3 C 0 I 327 s nomLeu3.chr11 120872032 50 + 123690457 atgcatgaatgattgaa-gcatt----aatgaatg-aatgaatgtatccatgtaca------------------ i nomLeu3.chr11 C 0 I 2 s rheMac3.chrUn_JH291127 34614 68 + 111706 ATGCGTGAATGATTGAA-GCATT----Aatgaatg-aatgaatgtatccatgtatctatgtatgtatccatgta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69849 68 + 192460366 ATGCGTGAATGATTGAA-GCATT----Aatgaatg-aatgaatgtatccatgtatctatgtatgtatccatgta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67225 68 - 187378091 ATGCGTGAATGATTGAa-gcatt----aatgaatg-aatgaatgtatccatgtatctatgtatgtatccatgtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418783 72 - 91754291 atgcatgaatgattgaa-gcattaatgaatgaatg-aatgaatgtatccgtgtatgtatgtatgtatccatgca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937837 50 - 74750902 atgaatgaatgattgactgaatg----catgaatgaaATGAGTGTGTACGTGTA-------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=20348.000000 s hg38.chr3_KI270935v1_alt 125257 15 + 197351 tgtatgtatccatgt s panTro4.chr3_GL389630_random 88466 15 + 103936 tgtatgtatccatgt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783072 15 + 202140232 tgtatgtattcatgt i ponAbe2.chr3 I 327 C 0 s nomLeu3.chr11 120872084 15 + 123690457 tgtgtgtatccatgt i nomLeu3.chr11 I 2 C 0 s rheMac3.chrUn_JH291127 34682 14 + 111706 tgtatatatgtat-c i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69917 14 + 192460366 tgtatatatgtat-c i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67293 14 - 187378091 tgtatatatgtat-c i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418855 9 - 91754291 tgtgtgtat------ i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937887 15 - 74750902 TGTATGTATGCATGT i calJac3.chr17 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=82174.000000 s hg38.chr3_KI270935v1_alt 125272 72 + 197351 atgtatgtgtgtatccatgcatgtatgc----atgtatgtatccatgtgtgtatccatgtgtgtatgta-tca-----tgta s panTro4.chr3_GL389630_random 88481 68 + 103936 atgtatgtgtgtatccatgcatgtatgc--------atgtatccatgtgtgtatccatgtgtgtatgta-tca-----tgta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783087 76 + 202140232 atgtatatgtgtatccatgtatgtatgtat-catgtatgtatccatgtatgtatccatgtgtgtatgtattca-----tgta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872099 40 + 123690457 atgcatgtgtgtatctatgcatgcatgt------------atccacgtatgt------------------------------ i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34696 80 + 111706 atgtgtgtatatatccatgcacgtatatatccacgtatgtatcaatgtatgta-tcatgtatgtatgta-tccatgtgtgta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 69931 78 + 192460366 atgtgtgtatatatccatgcacgtatatatccacgtatgtatcaatgtatgta-tcatgtatgtatgta-tcc--gtgtgta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67307 76 - 187378091 acgtgtgtatatatccatgcatgtatgtatccacgtatgtatcaatgtatgta-tcatgtatgtatgta-tcc----atgca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418864 65 - 91754291 ---catgtatgtatccatgcatgtatgtaaccatgtatgt----atgtat----ccatgtatgtatgta-tca-----tgca i chlSab2.chr15 C 0 I 4 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I e calJac3.chr17 937902 0 - 74750902 C a score=135724.000000 s hg38.chr3_KI270935v1_alt 125344 133 + 197351 tgtatccatgtagatatgtatca---atgtatgtatccatgtatgtat---ccatgtatgtatgtgtgtgt-catgcatgtatgcatgtatccatgtatgtatccata--tgtgtgtatc-------------------catgtgtgtatgtatccatgtg s panTro4.chr3_GL389630_random 88549 136 + 103936 tgtatccatgtagagatgtatca---atgtatgtatccatgtatgtat---ccatgtatgtatgtgtgtatccatgcacgtatgcatgtatccatgtatgtatccatatgtgtgtgtatc-------------------catgtgtgtatgtatccatgtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783163 130 + 202140232 tgtatatgtgtatccatgtatcatgtatgtatgtat-catgtatgtat---ccatatgtgtatg--------tatccatgtatacatgtatccatgtgtgtatgtatccatgtatgtatc-------------------catatgtgtatgtatccatgtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872139 91 + 123690457 --------------------------gtgtatgtatccgtgtatgtat---ccgtgtgtgtatg--------tatccatg--------------tgtatgtatccatatgtgtatgtatc-------------------catgtgtgtatgcatccatgtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34776 153 + 111706 tgtatccatgcatgtatgtatcgt--atgcatgtatcaatgtatgtatgtatcatgtatgtatgcatgtatccatgtatgtatgtatgtatccatgtatgtatgaatgtatgtatatatccatgtatgtgtat------catgtatgtatgtatcaatgta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 70009 149 + 192460366 tgtatccatgcatgtatgtatcgt--atgcatgtatcaatgtatgtatgtatcatgtatgtatgcatgtatcc----atgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtat------catgtatgtatgtatcaatata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67383 151 - 187378091 ggtatccatgcatgtacgtatcat--atgcatgtatcaatgtatgtat--------catgtatgtatgtatccatgtatgtatgtatgtatccatgtatgtatcaatgtatgtatatatccatgtatgtgtgtatcatgtatgtatgtatgtatcaatgta i papAnu2.chr2 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I e calJac3.chr17 937902 0 - 74750902 C e chlSab2.chr15 418929 4 - 91754291 I a score=22913.000000 s hg38.chr3_KI270935v1_alt 125477 16 + 197351 tgt---atgtatccatgta s panTro4.chr3_GL389630_random 88685 16 + 103936 tgt---atgtatccatgta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783293 16 + 202140232 tat---atgtatccatgta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872230 16 + 123690457 tgt---atgtatccatgta i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34929 19 + 111706 tgtatcatgtatgtgtgta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 70158 19 + 192460366 tgtatcatgtatgtgtgta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67534 19 - 187378091 tgtatcatgtatgtgtgta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418933 15 - 91754291 tgtatcatgta----tgta i chlSab2.chr15 I 4 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I e calJac3.chr17 937902 0 - 74750902 C a score=1866469.000000 s hg38.chr3_KI270935v1_alt 125493 670 + 197351 tgtCCTATTGCTTGAAAACTGGAttcc--------ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctccc------gaggagctggggctacaggcatgcaccaccacgcccactaatttttgtatttttcttctgcttttttttt-------taatgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagttaaagcaattcttgtgcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctaattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctcctaTGTGGCCTGCAAACTGGATTTCATATAAGCTGAAA--TTGACCTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGCCTCCCTGCTGAGCACTGTGAGAAAACACAGCAGCCAGTACAGCAGCTCAGCAAAGGCTGCGGCGCCGAGACCTCACCAAGCTCCCTGCGCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCGGGGAATCTCCCT s panTro4.chr3_GL389630_random 88701 669 + 103936 tgtCCTATTGCTTGAAAACTGGAttcc--------ttatttattttgagacagggtcccactcggttgcccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaagttc--aagccatcctcccacct--cagcctccc------gaggagctggggctacaggcatgcaccaccacgcccACTAAtttttgtatttttcttctgcttttttttt-------ttatgagac--agtctcgttctgtttcccacgctgcagtgcagtgtctcgatctcggctcactgcaatgtccccctcccaagttaaagcaattcttgtgcctcagcctcccaaatacttgagattacaggcatatgccaccacgcccagctgattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaagtcctgagctcaagcaatccgcctgcctcaggctccTGTGTGGCCTGCAAACTGGATTTCATATAAGCTGAAA--TTGACCTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGACTCCCTGCTGAGCACTGTGAGAAAACACAGCAGCCAGTACAGCAGCTCAGCAAAGGCTGCGGCGCCGAGACCTCACCAAGCTCCCTG-GCTCCCCTTTCTAACTCCC--TTACTGAAGCGACTCGGGGAATCTCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783309 677 + 202140232 tgtCCTATTGCTTGACAACTGGACTCC--------ttatttattttgagacagggtcccactctgttgcccagcctggagtgcaatgtcttgatcttggctcactgaaaacgccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactacaggcgtgcactaccacgcccactcatttttgtatttttcttctgctttttttttttttttctaatgagac--agtctcgttctgtttcccaggctgcagtgcagtgtctcgatctcggctcattgcaatgtccccctcccaagttaaagcagttcttgtgcctcagcctccccaatagttgagattacaggcatatgccaccacacccagctaattttttgatttttagtagagacagggtcttgccatattgcccaggctggtctcaaacttctgagctcaagcaatccgcctgcctcaggctcctaTGTGGCCTGCAAACTGGATTTCATATAAGCTGAAA--TTGACCTCCCTTGCTGACTCCCAAACCAAGAAGACAGAGCCTCCCTGCTGAGCACTGTGAGAAAACGCAGCAGCCAGAACAACAGCTTAGCAAAGGCTGCAGCTCCGAGACCTCACCAAGCTCCCTGCGCTCCCCTTTCTAACTCCC--TTACTGAAACGACTCAGGGAATCTCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872246 671 + 123690457 tgtTCTATTGCTTGAAAACTGGAttcc--------ttatttattttgagacagggtcccactgtgtcacccaggctggagtgcaatgtcttgatcttggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcttccc------aaggagctgggactacaggcatgcaccaccacgcccACTAAtttttgtatttttcttctgctttttttttt------taatgagac--aatctcattctgtttcccaggctgcagtgcagtgtctcgatctcggctcattgcaatgtcccccgcccaagttaaagcaattcttgtgcctcagcctcccaaatagttgagattacaggcatatgccaacacgcccagctaattttttgatttttagtagagacacggtcttgccatattgcccaggctgatctcaaagtcctgagctcaagcaatccgcctgcctcaggctccTGTGTGGCCTGCAAACTGGATTCCATAGAAGCTGAAA--TTGACCTCCCTTGTTGACTCCTAGACCAAGAACACAGAGCCTCCCTGCTGAGCACTGTGAGAAAACGCAGCAGCCAGAACAACAGCGCAGCAAAGGCTGCGGCGCCCAGGCCTCACCAAGCTCCCTGCACTTCCCTTTCTAACTCCC--TTACTGAATCGACTCAGGGAATCTCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 34948 669 + 111706 tgtaCTATTGCTTGAAAACTGGAttcc----ttatttatttattttgagacagggtcgcactatgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccACTAAtttttgtatttttctttttctttttt----------ttatgagac--agtctcgttctgttttccaggctgcagtgtaatgtctcgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagcccaagcaatccacctgcctcaggcttctaTGTGGCCTGCAAACTGGATTTCATATAAGCTGACATTTTGACCTCCCTTGCTGACCCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC--TGAGAAAACACAGCAACCAGAACAACAGCCCAGCAAAGGCTGTGGCTCCAATATCTCCCCACGCTCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCAGCTCC-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 70177 669 + 192460366 tgtactatTGCTTGAAAACTGGATTCC----ttatttatttattttgagacagggtcgcactatgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccactaatttttgtatttttctttttctttttt----------ttatgagac--agtctcgttctgttttccaggctgcagtgtaatgtcttgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaatagctgggattacaggcatatgccaccatgcccagctaattttttgatttttattagagacagcgtcttcacatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCCTGCAAACTGGATTTCATATAAGCTGACATTTTGACCTCCCTTGCTGACTCCCAAACCAAGAAGACGGAACCTCCCTGCTAAGTAC--TGAGAAAACACAGCAACCAGAACAACAGCCCAGCAAAGGCTGTGGCTCCAATATCTCCCCACGCTCCCTGCACTCCCCTTTCTAACTCCC--TTACTGAAGCAACTCGGGGCAGTTCC-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 67553 669 - 187378091 tgtactatTGCTTGAAAACTggattcc----ttatttatttattttgagacagggtcacactctgtcacccaggctggagtgcagtgtcttgatctcggctcactgcaaactctacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcatgtactaccatgcccactaatttttgtatttttctttttctttttt----------ttatgagac--agtctcgttctgttttccaggctgcagtgtaatgtctcgatctcggctcactgcaatgtccccctcctgagttaaagcaattcttgtgcctcagcctcccaaagagctggaattacaggcatatgccaccatgcccagctcatttttttatttttagtagagacagcgtcttcacatattgcccaggctggtctcaaagtcctgagctcaagcagtccacctgcctcaggctcctgtgtGACCTGCAAACTGGATTTCATAGAAGCTGACATTTTGACCTCCCTTGCTGACCCCCAAACCAAGAAGACAGAACCTCTCTGCTAAGTAC--TGAGAAAACACAGCAACCAGAACAACAGCCCAGCAAAGGCTGTGGCTCCAATATCTCCCCACGCTCCCTGCACTCCCCTTTCCAACTCCC--TTACTGAAGCAACTCGGGGCATCTCC-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 418948 674 - 91754291 tgtTCTGTTGCTTGAAAGCTGGACTCCttatttatttatttattttgagacagggtcgtactccgtcgcccaggctggagtgcagtgttttgatctcagctcactgcaaactccacctcccaggttc--aagccatcctcccacct--cagcctcct------gaggagctgggactataggcttgtaccaccatgcccACCAGtttttgtatttttctttttc-ttttt----------ttatgagac--agtcttgttctgttttccaggctgcagtgcagtgtctcgatctcagctcactgcaatgtccccctcccgagttaaagcaattattgtacctcagcctcccaaatagctgggattacaggcatatgccaccacgcccagctaattttttgatttttagtagagacagcatcttgccatattgcccaggctggtctcgaagtcctgagctcaagcaatccacctgcctcaggctcctaTGTGGCCTGCAAACTGGATTTCATATAAGCTGACATTTTGACCTCCCTTGCTGACCCCCAAACCAAGAAGACAGAACCTCCCTGCTAAGTAC--TGAGAAAACGCAGCAACCAGAACAACAGCCCAGCAAAGGCTGTGGCTCCAATATCTCACCAAGCTCCCTGCCCTCCCCTTTCTAACTCCCTTTTACTGAAGCAGCTTGGGGCATCTCC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 937902 671 - 74750902 TCTACTATTGCTTGAAAACTGGATTCCTAAtttatttatttattttgagacagggtctcactctgtcacccaggttggagtgcagtgtcttgatctctgctcactgcaacctccgcct-ccaggctcaaaagctatcctcccgcctcccatcctcccactagggaggggccaggactacaggcatgctctattatgcccAC---tttttgtatttttctttt---ttttt----------ttatgagacagagtcgcattctgttgccc-cgctggagtgtagtgtttcaatatcggctcactgcaacgtccacctcccgagttaaagcaattcttgtgcctcagcctcccgaaaagctgggattacaggcacgtgccaccatgcccagctaattttttgatttttagtagacatggggtctggtcatattgcccaggctggtctcgaagtcctgagctcaagcaatctgcctgcctcagcctcccaTGTGGCCTGCAAACTGGATTTCATATAAGCTGAAGTTTTGACCTCCTTTGCTGACTCCCGAGCCAGGAAGACAGAGCCTCCCTGCTAAGCACCGTAAGAAAATGCAGCAACCAGAACAACAGCCCAGCAAAGGCCGTGG---------TTCACCAAGCTCCCAG-ACTCCCCTTTCTAACTCCC--TTACTGAAACGACTCAGGGAATCTCCCt i calJac3.chr17 C 0 I 138 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I a score=12231.000000 s hg38.chr3_KI270935v1_alt 126163 23 + 197351 AAAATGGAATCCTCTAACACTTG s panTro4.chr3_GL389630_random 89370 23 + 103936 AAAATGGAATCCTCTAACACTTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199783986 23 + 202140232 AAAATGGAATCCTCTAACACTTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872917 23 + 123690457 AAAATGGAACCTTCTAACACTTG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 35617 0 + 111706 C e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069330 4 + 31377067 I e calJac3.chr17 938573 138 - 74750902 I e chlSab2.chr15 419622 0 - 91754291 C e macFas5.chr2 70846 0 + 192460366 C e papAnu2.chr2 68222 0 - 187378091 C a score=1640147.000000 s hg38.chr3_KI270935v1_alt 126186 674 + 197351 CTACTCCCAAGAGTGGATATTTGGGGATCTGTGGAATAGTATATTGATTTCAA--TCTCTTTTTCCCATTGTGTATTTTAT-GCTTTTCTACCCCCTACCCCACCAACCGTCCCTACCTCTATCCCTTTCGAGTACCCATTCTCTGCTCATGCTTCAGAAGGA--tgtgtgtgtgtgtctgtgtg----------------------------tgcgt------------------------gtgc----------------atgcgtgtgtgtgtaagtggtgAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCAGATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---acatggagaagtagtttctccaaactggaaaagatgtttcttttagctggaaggagatagtaaaagag-aaagcaaaggggcttggaggtgtcaagata--gagggacccgcagctctcttcccagcaccgtgatgatgacatcctagggagaaatgactgtggggtgcttctaggcagacaggactgtaagcggcctcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctccctgggtctgaaggggaagtggggcggag-ctgtgatggaaacctgtgtggactcacgcccaggga-cccacaaccaccttccaccccacacc s panTro4.chr3_GL389630_random 89393 675 + 103936 CTACTCCCAAGAGTGGATATTTGGGGATCTATGGAATAGTATATTGATTTCAA--TCTCTTTTTCCCATTGTGTATTTTAT-CCGTTTCTACCCCCTACCCCACCAACCATCCCTACCTCTATCCCTTTCAAGTACCCATTCTCTGCTCATGCTTCAGAAGGAtgtgtgtgtgtgtgtctgtgtg----------------------------tgcgt------------------------gtgc----------------atgcatgtgtgtgtAAGTGGTGAAGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCAGATAGGGCAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---acatggagaagtagtttctccaaactggaaaagatgtttcttttagctggaaggagatagtaaaagag-aaagcaaaggggcttggaggtgtcaagata--gaggcacccgcagctcttttcccagcaccgtgatgatgacatcctagggagaaatggctgt-gggtgcttctaggcagacgggactgtaagcggcctcagaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctccctgggtctgaaggggaagtggggcggag-ctgtgatggaaacctgtgtggactcacgcccaggga-cccacgaccaccttccaccccacacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199784009 699 + 202140232 CTACTCCCAAGAGTGGATATTTGGGGATCTATGGAATAGTATATTGATTTCAATCTCTCTTTTTCCCATTGTGTATTTTAT-CCTTTTCTACCCCCTACCCCACCAACCATCCCTACCTCTATCCCTTTCAAGTACCCATTCTCTGCTCATGCTTCAGAAGGA--tgtgtgtgtgtgtctgtgtg----------------------------tgcgtgtgtgtgtgtgtgtctgcgtgtgcgtgt----------------gtgtgtgtgtgtgtAAGTGGTGAAGGAGGTAGTTTTGTTTTGCCAGATAAACACTTTCCTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TAAAAAAGCAGATAGGACAAGAGTTGTGGAATTAGGCCaag-tatcttggctagaa---acatggagaagtagtttctccaaactggaaaagatgtttcttttagctggaaggagatagtaaaagag-aaagcaaaggggcttggaggtgtcaagata--gagggacccacagctctcttcccagcaccgtgatgatggcgtcctagggagaaatggctgtggggtgcttctaggcagacgggactgtaagcggcctcagaaaaggtgtcctgtgtttgagcaaggcacagaagcagcagtgcctctccctgggtctgaaggggAAGTGGGGCGGAG-CTGTGATGGAAA-CTGTGTGGACCCAGGCCCAGGGA-CCCACGACCACCTTCCACCTCTCACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120872940 677 + 123690457 CTACTCCCAAGAGTGCATATTTGGGGATCTATGGAATAGTATATTGATTTCAATCTCTCTTTTTCCCATTGTGTATTTTAT-CCTTTTCTACCCCCTACCCCACCAACCATCCCTACCTCTATCCCTTTCAAGTACCCATTCTCTGCTCATGTTTCAGAAGGA--tgtgtgtctgtgtgtgtgtg----------------------------tgtctgtgt--------------------gtgt----------------gtgtgtgtgtgtgtAAGTGGTGAGGGAGGTAGTTTTGTGTTGCCAGATAAACACTTTCctttctggctcttcttttacaaccaaaaataaaaa------------taaaaaagcagataggacaagagttgtggaattaggccaag-tatcttggctagaa---acatgcagaagtaatttctccaaactggaaaagatgtttcttttagctggaaggagatagtaaaggag-aaagcaaaggggcttggaggtgtcaagata--gagggacccacagctctctccccagcaccg---tgatggcatcccagggagaaacggctgtggggtgcttctaggcagacgggactgtaagcggcctcagaaaaggtgtcctttgtctgagcaaggcacagaagcagcagagcctctccctgggtctg-aggggaagtggggcagag-ctgtgatggaaacctgtgtggactcaggcccagggaccccatgaccaccttccgccccacacc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 35617 652 + 111706 --------------------------------AGAATAGTAGATTGATTTTAATCTGTCTTTTTCCCATTGTGTATTTTAT-CCTTTTCTACCCCCCACCCCACCAACCATCACTACCTCTATCCCTTTCAAGTCCCCATTCTCTGCTCATGCTTCAGAAGGA--tgtgtatgtgtatgtgtctg----------------------------tgtgcgtgtgcatgtgtgt----------gtgc------------------gtgtgtgtgtgtAAAGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----CTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------CTAAAAAGCAGATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---acatggagaagtaatttctccaaactgaaaaagatgtttcttttagccagagggagagagtaaaagag-aaagcaaaggggcttggaggtgtcaagata--gagcgaccagcagctctcttcccagcaccgtgatgatgacatcctagggagaaatggctgtggggtgcttctaggcagacaggaccataagcggcctcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctccctgggtctgaaggggaagtggggcagag-ctgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttccaccccacacc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 70846 652 + 192460366 --------------------------------AGAATAGTAGATT--TTTTAATCTGTCTTTTTCCCATTGTGTATTTTAT-CCTTTTCTACCCCCCACCTCACCAACCATCACTACCTCTATCCCTTTCAAGTCCCCATTCTCTGCTCATGCTTCAGAAGGA--tgtgtatgtgtatgtgtctg----------------------------tgtgtgtgtgcatgtgtgt----------gtgc----------------atgtgtgtgtgtgtAAAGGGTGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----ctttctggctcttcctttacaaccaaaaataaaaa------------ttaaaaagcacataggacaagagttgtggaattaggccaaa-tatcttggctagaa---acatggagaagtaatttctccaaactggaaaagatgtttcttttagccagagggagagagtaaaagag-aaagcaaaggggcttggaggtgtcaagata--gagcgaccagcagctctcttcccagcaccgtgatgatgacatcctagggagaaatggctgtggggtgcttctaggcagacaggaccgtaagtggcctcgtaaaaggtgtcctatgtctgagcaaggcacagaagcagcagagcctctccctgggtctgaaggggaagtggggcagag-ctgggatggaaacctgtgtggactcatgcccagggaccccatgaccaccttccaccccacacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 68222 654 - 187378091 --------------------------------AGAATAGTAGATTGATTTTCATCtgtctttttcccattgtgtattttat-ccttttctaccccccaccccaccaaccATCACTACCTCTATCCCTTTCAAGTCCCCATTCTCTGCTCATGCTTCAGAagga--tgtgtatgtgtatgtgtctg----------------------------tgtgtgtgtgcatgtgtgt----------gtgc----------------gtgtgtgtgtgtgtaaagggtGAAGGAGGTGGTTTTGTGTTGCCAGATAAACA-----CTTTCTGGCTCTTCCTttacaaccaaaaataaaaa------------ttaaaaagcagatagGACAAGAGTCGTGGAATTAGGCCAAG-TATCTTGGCTAGAA---ACATGGAGAAGTAATTTCTCCAAACTGAAAAAGATGTTTCTTTTAGCCAGAGGGAGAGagtaaaagag-aaagcaaaggggCTTGGAGGTGTCAAGATA--GAGCGACCAGCAGCTCTCTTCCCAGCACCGTAATGATGACATCCTAGGGAGAAATGGCTGTGGGGTGCTTCTAGGCAGACAGGACCATAAGCGGCCTCGTAAAAGGTGTCCTATGTCTAAGCAAGGCACAGAAGCTGCAGAGCCTCTCCCTGGGTCTGAAGGGGAagtggggcagag-ctgggatggaAACCTGTGTGGACTCATGCCCAGGGACCCCATGACCACCTTCCACCCCACACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 419622 698 - 91754291 --------------------------------AGAATAGTAGATTGATCTTAATCTGTCTTTTTCCCATTGTGTATTTTAT-CCTTTTCTACCCCCCACCCCACCAACCATCACTACCTCTATCCCTTTCAAGTTCCCATTCTCTGCTCATGCTTCAGAAGGA--tgtgtatgtgtctgtgtgtgcacgtgtgtgcgtgtgcgtgtatgtgcatgtgtgtgtgcatgtgtgt----------gtgcgtgtgtgcgtgtgtgcgtgtgtgtgtgtgCAAGGGGTGAAGGAAGCAGTTTTGTGTTGCCCGATAAACA-----CTTTCTGGCTCTTCCTTTACAACCAAAAATAAAAA------------TTAAAAAGCAGATAGGACAAGAGTCGTGGAATTAGGCCaag-tatcttggctagaa---acatggagaagtaatttctccaaactgaaaaagatgtttcttttagccagagggagagagtaaaagag-aaagcaaaggggctcggaggtgtcaagata--gggccaccagcagctctcttcccagcaccgtgatgatgacatcctagggagaaatggctgtggggtgcttctaggcagacaggaccgtaagcggcctcgtaaaaggtgtcctgtgtctgagcaaggcacagaagcagcagagcctctccctgggtctgaagggaaagtggggcagag-ctgcgatgggaacctgtgtggactcatgcccagggaccccacgaccaccttccaccccacacc i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29069334 651 + 31377067 CTACTTCCAGGACTGGACATCTGGGGACACCTAAACTAATACATTGATGCCAATCTCTGTTTTTCCTCGTCTGTGTCTTGTCCCCTCTCTGCCCCCGGGCTC---------CTCCACCTCTACCCCTTCCCGGTGGGAATGCTC-GATCGTGCTTCCCGAGAA-------------------------------------------------------------------------------GGGC------------------GCCTGTAGGTGTAAGGAGCGAGCGGGGCGGTGGGGTATCGCCAGCCAAACACTCCCCTTTATGGCTCCTGCTTTACAACCCAAACAAAACAAAACAAAGTTTTTAAAAAAGCAAATGGGGCAGGATGGATAGACTAAGGCCAAACTGTCGTGGTTAGAACCGGCATGCACCAAGATAGtctctaaaatg-aaaagatccttcttttagctggaaggagacagtagaagagaaaaacgaaggggtgtaggggcgtcaacatcataggggacctacacccctcttcccaacgccacaacgaggagagcccagagagaaataggcgtgtggtgcttgtaggcagacgcagcc-tagggcgccttataaaaggtgccccgtgtctgagcaaagcaccgaagccatggagcacctccctgggcctgaagaggagggagcacggcgcctgtgag------ctgtgtaggcacgtgcccagggaccacagga--ggcctccctcccccACC i canFam3.chr33 I 4 I 85 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I a score=13748.000000 s hg38.chr3_KI270935v1_alt 126860 5 + 197351 gcagg s panTro4.chr3_GL389630_random 90068 5 + 103936 gcagg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199784708 5 + 202140232 GCAGG i ponAbe2.chr3 C 0 I 830 s nomLeu3.chr11 120873617 5 + 123690457 gcagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36269 5 + 111706 gcagg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71498 5 + 192460366 gcagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 68876 5 - 187378091 GCAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420320 5 - 91754291 gcagg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069985 85 + 31377067 I e calJac3.chr17 938573 138 - 74750902 I a score=154974.000000 s hg38.chr3_KI270935v1_alt 126865 83 + 197351 gccctctgctgggcttcgccgcagagctgtg---------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg s panTro4.chr3_GL389630_random 90073 83 + 103936 gccctctgctgggcttcgccgcagagctgtg---------------gggcgctgtgagaaagacggaggtggaagtttcctgccaacctggcagaagg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120873622 98 + 123690457 gccctctgctgggctttgccgcagagctgtggaactgggaaccactgggcactgtgagaaagactgaggtggaagtttcctgccaacctggcagaagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36274 97 + 111706 gccctctgctgagctttgccacagagctgtggaactggaaaccattgggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71503 97 + 192460366 gccctctgctgagctttgccacagagctgtggaactggaaaccattgggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 68881 97 - 187378091 GCCCTCTGCTGAGCTTTGCCACAGAGCTGTGGAACTGGAAACCATTGGGCACTGTGAGAAAGACTGAGGTGGAGGCTTCCTGCCAACCTGGCag-agg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420325 97 - 91754291 gccctctgctgagctttgccacagagctgtggaactgggaaccactgggcactgtgagaaagactgaggtggaggcttcctgccaacctggcag-agg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29069985 85 + 31377067 I e calJac3.chr17 938573 138 - 74750902 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=104956.000000 s hg38.chr3_KI270935v1_alt 126948 105 + 197351 ggaggtgggagataaaaatccagttgaact---------ataagcaataaagtaag----Gttctttc------------ctctttccttccttccttcctttttct----------------------------------------------ttctttcgtccttctttttctcc--- s panTro4.chr3_GL389630_random 90156 105 + 103936 ggaggtgggagataaaaatccagttgaact---------ataagcaataaagaaag----Gttctttc------------ctctttccttccttccttcctgtttct----------------------------------------------ttctttcgtccttctttttctcc--- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120873720 87 + 123690457 ggaggtgggagataaaaatccagttgaact---------ataagcaata----aag----Gttctttc------------ctctttccttccttccttctttcttc------------------------------------------------------------ctttttctcc--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36371 153 + 111706 ggaggtgggagagaaaagtccagttgaact---------ataagcgatc----aag----tttctttctttctctttcttttcttttctttctctcttcctttttc--tctctttctttcccttccttcccctttctttccttccttcc----ttctttcttctttctttttctcc--- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71600 159 + 192460366 ggaggtgggagagaaaagtccggttgaact---------ataagcaatc----aag----tttctttctctttctttcttttcttttctttctctcttcctttttctttctctttctttcctttccttcccctttctttccttccttccttctttctttcttctttctttttctcc--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 68978 159 - 187378091 ggaggtgggagagaaaaGTCCAGTTGAACT---------ATAAGCAatc----aagtttctttctttctctttctttcttttcttttctttctctcttcctttttctttctctttctttcccttccttcccctttctttccttccttcc----ttctttcttctttctttttctcc--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420422 98 - 91754291 ggaggggggagagaaaagtccggttgaact---------gtaagcaatc----aagtttctttctttctctttctttcttttcttttc-----------------------------------------------------------------ttttcttttctttctttctctct--- i chlSab2.chr15 C 0 I 14 s canFam3.chr33 29070070 112 + 31377067 agggtcgtgagctggagcccccattgggcTTGCtgctcagtgaggagtctgttgag----attctttc-----------------cccctcctctgttcctccccct----------------------------------------------gcttgtgcacgcaccccctcGACACG i canFam3.chr33 I 85 C 0 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=660.000000 s hg38.chr3_KI270935v1_alt 127053 14 + 197351 aata----------------------------------tagtttcttt s panTro4.chr3_GL389630_random 90261 48 + 103936 aatattttctttctttctttctttctttctttctttctttctttcttt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120873807 38 + 123690457 aata----------aagttagtttctttctttcattcattcattcttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36524 14 + 111706 aata----------------------------------aagtttcttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71759 14 + 192460366 aata----------------------------------aagtttcttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69137 14 - 187378091 aata----------------------------------aagtttcttt i papAnu2.chr2 C 0 C 0 s canFam3.chr33 29070182 14 + 31377067 CGTG----------------------------------CACCCTCTCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I e chlSab2.chr15 420520 14 - 91754291 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=27434.000000 s hg38.chr3_KI270935v1_alt 127067 17 + 197351 ctttctttctttttc---tc s panTro4.chr3_GL389630_random 90309 17 + 103936 ctttctttctttttc---tc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120873845 17 + 123690457 ctttctctctttttc---tc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36538 20 + 111706 ctttctttctctttcttttc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71773 20 + 192460366 ctttctttctctttcttttc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69151 20 - 187378091 ctttctctttcttttccttc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420534 20 - 91754291 ctttgtttctctttcctttc i chlSab2.chr15 I 14 C 0 s canFam3.chr33 29070196 17 + 31377067 CCCTCTCTCTCTGTC---TC i canFam3.chr33 C 0 I 107 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=508343.000000 s hg38.chr3_KI270935v1_alt 127084 323 + 197351 ctttcc------------------------ctttctttcctt--tcctttctttcct-ttcctttctttccctcctt------------ctttctttcttttct----------------tttcttttcttttctt---ttctttctttttgacatagagtctcactctgttgcccaggctggagtacaatggcgcaatcttggctcactgtaacctccacctcccgggtgcaagcgattttcctgccgcagcctcccgagtagctgggactacaggcgcctgccaccacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcttgcc s panTro4.chr3_GL389630_random 90326 332 + 103936 ctttcc------------------------ttttctttcctt--tcctttctttcct-ttcctttctttccctcctt------------ctttctttcttttcttttctt-------ttctttcttttcttttctt---ttctttctttttgagatagagtctcactctgttgcccaggctggagtacaatggcgcaatctcggctcactgtaacctccacctcccgggtgcaagcgattttcctgccgcagcctcccgagtagctgggactacagacacctgccaccacgcccggctaatttttgtatttttagtagagatggggttccaccatgttggtcaggatggtcttgatctcctgaccttgtgatccgcttgcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120873862 294 + 123690457 ctttcc------------------------tttacttttctt--tccttt-----------ccttttttcattcctt------------ctttctttc-----------------------------------ctt---ttctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctccgcctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcccagctaatattggtatttttagtagagacggggtttcaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgccttcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36558 355 + 111706 cttccttcccctttct--------------ttctctttccttccttccttccttctt-tctctttctttcttttctt-----------tctgtctctcctttcctttctttccttccttctttctttcctttcttttcattctttctctttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctctgcctctcgcgttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccggctgatttttgtatttttagtagagatggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 71793 366 + 192460366 cttccttcctttctcttta-------tttcttttctttctttctttctctctctttt-tttctttctttcttttctt-------tctgtctgtctctcctttcctttctttccttccttctttctttcctttcttttcattctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactgtaacctccgcctcccgcgttcaagcgattctcctgcctcagcctcccaagtagctgggacaacaggcgcccgccaccacacctggctgatttttgtatttttagtagagatggggttccaccatgttggtcaggctggtctcgatctcctgaccttgtgatccgtctgcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69171 369 - 187378091 cttccttcccctttctttctctttctttctctttctttctttccttccttccttcct-tttctttctttcttttctt-----------tctgtctctcctttcctttctttccttccttctttctttcctttcttttcattctttctttttgagatggagtctcactctcttgcccaggctggagtgcagtggtgcaatcttggctcactgtaacctccgcctcccgcattcaagcgattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaccacacccagctgatttttgtatttttagtagagatggggttccaccatgttggtcaggatggtctcgatctcctgaccttgtgatccgcctgcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420554 357 - 91754291 cttccc------------------------ctttctttccttccttctttctttcttctttctttctttctttctgtctgtctgtctgtctgtctctcttttcctttctttccttccttctttctttcctttcttttcattctttctttttgagatggagtctcactctgttgcccaggctggagtgcagtggcgcaatcttggctcactataacctccacctcccgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggtgcccgccaccacgcccggctagtttttgtatttttagtagagatggggttccaccatgttggtcaggatggtcttgatctcctgaccttgtgatccgcctgcc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e canFam3.chr33 29070213 107 + 31377067 I e calJac3.chr17 938573 138 - 74750902 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=89329.000000 s hg38.chr3_KI270935v1_alt 127407 50 + 197351 tcagcctccaaaagt----gct--gagattaaag---gcgtgagccactgcacccggcc s panTro4.chr3_GL389630_random 90658 50 + 103936 tcagcctccaaaagt----gct--gagattaaag---gtgtgagccactgcacccggcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120874156 50 + 123690457 tcagcctccaaaagt----gct--gagattaaag---gcgtgagccactgcaccaggcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36913 50 + 111706 tcagcctccaaaagt----gct--gggattaaag---gcatgagcccctgcacccggcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 72159 50 + 192460366 tcagcctccaaaagt----gct--gggattaaag---gcgtgagccactgcacccggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69540 50 - 187378091 tcagcctccaaaagt----gct--gtgattaaag---gcatgagccactgcacccggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420911 50 - 91754291 tcagcctccaaaagt----gct--gtgattaaag---gcatgagccactgcacccagcc i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29070320 57 + 31377067 tcagcctggcagagtgggagctaggggattaaaattcggttgagcgataagccgtga-- i canFam3.chr33 I 107 C 0 e mm10.chr16 65432248 468 - 98207768 I e calJac3.chr17 938573 138 - 74750902 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=68319.000000 s hg38.chr3_KI270935v1_alt 127457 26 + 197351 AGAAAGTTCTCTTTCTTCC-CATGTGA s panTro4.chr3_GL389630_random 90708 26 + 103936 AGAAAGTTCTCTTTCTTCC-CATGTGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120874206 26 + 123690457 AGAAAGTTCTCTTTCTTCC-CACATGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36963 26 + 111706 AGAAAGTTCTCTTTCTTCC-CATGTGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 72209 26 + 192460366 agaaagttctctttCTTCC-CATGTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69590 24 - 187378091 agaaagtTCTCTTTCTTCT---TGTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420961 26 - 91754291 AGAAAGTTCTCTTTCTTCC-CATGTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 938711 26 - 74750902 aaaaaGTTCTCTTTCTTCC-CAGGTGA i calJac3.chr17 I 138 C 0 s canFam3.chr33 29070377 27 + 31377067 agacagttctgtttcttacacatgtaa i canFam3.chr33 C 0 C 0 e mm10.chr16 65432248 468 - 98207768 I e ponAbe2.chr3 199784713 830 + 202140232 I a score=183452.000000 s hg38.chr3_KI270935v1_alt 127483 92 + 197351 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCATC------TCCCAACACAGACACACCCAGGACAGGCAGAATCACA s panTro4.chr3_GL389630_random 90734 92 + 103936 GTTTGTGGCCTGAGACTGGAATCTGCTCTACTCACCTACCACTGCTCCACCCACC------TCCCAAGACAGACACACCCAGGACAGGCAGAATCACA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120874232 92 + 123690457 GTTTATGGCCTGAGACTGGAGTCTTCTCTACTCACCTACCACTGCTCCACCCACC------TCCCAACACAGACACACCCAGGAGAGGCAGAATCACA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 36989 73 + 111706 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACC------TCCCAACACCAACACACCCAGCAGAGGCAGAATCACA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 72235 73 + 192460366 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACC------TCCCAACACCAACACACCCAGCAGAGGCAGAATCACA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69614 73 - 187378091 GTTTATGGCCTGAGACTGGAAT-------------------Ctgctccacccacc------tcccaacaccaaCACACCCAGCAGAGGCAGAATCACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 420987 73 - 91754291 GTTTATGGCCTGAGACTGGAAT-------------------CTGCTCCACCCACC------TCCCAACACAGACACACCCAGGAGAGGCAGAATCACA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 938737 92 - 74750902 GTTTATGACCTAAGACTGGTATCCGCTCCACTCATCTACCATAGCTCCACCCACC------TCCCAACACAGACACGCCCAGGAGAGGCAGAAACACG i calJac3.chr17 C 0 C 0 s mm10.chr16 65432716 91 - 98207768 GTTTGTAGCCCAAGA-TGGCCCCTGCGCCACTTACCCACCACAGCTCCACCCTCC------TCCCTAGATACACTTTCCCCGGGAGAAAACACACACA i mm10.chr16 I 468 I 2 s canFam3.chr33 29070404 71 + 31377067 gttcatggcctgagattGAGGT----------------TGACTGTCCTCCCCTGCCTTGGTTCCCAACACATACAATTCCCACCGAG----------- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199784713 830 + 202140232 I a score=3266253.000000 s hg38.chr3_KI270935v1_alt 127575 994 + 197351 GCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAA----CTCCTCCCCCACCTCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGATTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAATGTTGAGAGCTGGGAGAC------------------------TCCT--CGGCTCTGTGGTCTGATTGCTGATACGGGGCTtcccccacccctctcaggccaccct-ccccctccccAGACAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTAT-C--GGGGGTGATCCTGGTCACGCTCCCAGCTGGAAGGACGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCCTCC----TGAAGAAACCCCAAAGGGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCGGCCAAACTGGCTTCACTCTCACGGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACCC----CCCACTTCCTGGACCTTT-CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCAGATCAAA------CTGATATTTT-----TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAAGTGACAG---AGAATAGACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCCGTGGA-GAAGAAAACCTCTCAGTGCCATTGTCTCGCACCTGGGAGGACG-CACATGG-----------------------------------------GGCAAAAGGGATGCAGGCAAAGCAGTCCCTTCTGAGACACAGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA------ s panTro4.chr3_GL389630_random 90826 1017 + 103936 GCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAA----CTCCTCCCCCGCCTCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCAGGGAAGATGAGAATGTTGAGAGCTGGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--CAGCTCTGTGGTCTGATTGCTGATATGGGGCTTCCCCCACCCCTCTCAGGCCACCCT-CCCCCGCCCCAGACAAATCTCATTGGTCATTTCCTTTGTGCAAGGCTGGTAT-C---GGGGTGATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCAGTTTCCTCC----TGAAGAAACCCCAAAGGGCAGCCCTGGCCGGGCTCACACCAGGATGGGACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCAGCCAAACTGGCTTCACTCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACTC----CCCACTTCCTGGACCTTT-CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCAGATCAAA------CTGATATTTT-----TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAAGTGACAG---AGAATAGACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTGGGGCCCGTGGA-GAAGAAAACCTCTCGGTGCCATTGTCTCGCACCTGGGAGAACG-CACGTGG-----------------------------------------GGCAAAAGGGATGCAGGCAAAGCAGTCCCTTCTGAGACACGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA------ i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199785543 1017 + 202140232 GCATCCATTCCACTCCCATTTCCTCTCCCCTCGGCACAGAAA----CTCCTCACGCGCCTCCCAACACTCACCTCCAGGGAGGAGTTGCCTACCCTGCTGGTCTGGTTGTACGAACACTGGCTCTCTGCATTGCAATGGCAGACCACGGTCCTGGGCTGGAGTGCAGAGGCCAAGACAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAATGTGGAGAGCTGGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--CATCTA-ACACCCTGATTGCTGATACGGGGCTTCCCCCACCCCTCTCAGGCCACCTTCCCCCCTCCCCAGACAAATCTCATT-GTCATTTCCTTTGAGCAAGGCTGGTAT-C--GGGGGTGATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAATGCCACAGAGGGGAAAGCAGTTTCCTCC----TGAAGAAACCCCAAAGGGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGAATCCTCCAGACACCTCCTCAGGCTGCGCTGCCAGCCAAACTGGCTTCACTCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACCC----CCCACTTCCTGGACCTTT-CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTACTACATA-----------TCTTCTGATCAAA------TTTATATTTT-----TCAAGAAAATAAGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAAGTGACAG---AGAATAGACGAACGTAATTTCCAGACCATCGTCCTTCAGGGGTAGGGCCCGTGGA-GAAGAAAACCTCTCAATGCCATTGTCTCGCACCTGGGAGGACG-CACGTGG-----------------------------------------GGCAAAAGGGATGCAGGCAAAGCAGTCCCTTCTGAGACACGGGGAGAAGGAACATCAGGCAGA-----GAGGCAAAGA------ i ponAbe2.chr3 I 830 C 0 s nomLeu3.chr11 120874324 1017 + 123690457 GCATCCGTTCCACTCCCATTTCCTCTCCCCTCGGCACAGACA----CTCCTCACCCGCCTCCCAGCACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCACTGCAATGGCAGACCACGGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACGTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAGCGACTTGGGTGTCCACAGCAACGTCCCATTCTCTGCCCGGGGGAAGATGAGAACGTTGAGAGCTGGGAGACTCCTCAGCTCTGTGGTCTGACGCATCCT--CATCTA-ACACCCTGACTGCTGATACTGGGCTTCCCCCACCCCTCTCAGGCCACCCTCCCCCCTCCCCAGACAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTAT-C--GGGGGTGATCCTAGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAGCGGGGAACGCCACAGAGGGGAAAGCGGTTTCCCCC----TGAAGAAACCCCAAA-GGCAGCCCTGGCTGGGCTCACACCAGGATGGGACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGACACCTCCCCAGGCTGCGCTGCCGGCCAAACTGGCTTCAGTCTCACAGCAGCCCCATCCTTTGCCCTGGTTTCTCACCCACCC----CCCACTTCCTGGACCTTT-CCCAGACACCCCCTTCAGACACCAGACTGTAGTGAAACACTGCTACATA-----------TCTTCTGATCAAA------CTTATATTTT-----TCAAGAAAATAGGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAAGTGACAG---AGAATAGACGAACGTAATTTCCAGATCATCGTCCTTCAGGGGTGGGGCCCGTGGA-GAAGAGAATCTCTCAATGCCATTGTCTCGCACCTGGGAGGACG-TACGTGG-----------------------------------------GGCAAAAGGGTTGCAGGCAAAGCAGTCCCTTCTCAGACGCGGAGAGAAAGAACATCAGGCAGA-----GAGGCAAAGA------ i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 37062 1046 + 111706 GCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAA----CTCCTCACCTGCCTCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--CATCCA-ACACCCTGATTGCTGATGCGGGGCTTCTCCCACCCATCTCAGGCCA-CCTCCCCACTCCCCAGACAAATCTCATTGGTGATTTCCTCTGAGCAAGGCTGGTAT-C----GGGTGATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCCCAC----TGAAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCTGG-GGGATGGAGGAT-------CAACGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCATTCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACCC----CCCACTTCCTGGGCCTTT-CCCA-ACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CTTACACTTT-----TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAAGTGACAG---AGAACAGACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCCGTGGA-GAATAAAATCTCCCAACGCCGTTGTCTTGCACCTGGAAGGACG-CACGTGG-----GGCACAGTTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGTAAAGA------ i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 72308 1047 + 192460366 GCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAA----CTCCTCACCTGCCTCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGTGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGAGCCGGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--TATCCA-ACACCCTGATTGCTGATGCGGGGCTTCTCCCACCCATCTCAGGCCA-CCTCCCCACTCCCCAGACAAATCTCATTGGTGATTTCCTTTGAGCAAGGCTGGTAT-C----GGGTGATCCTGGTCATGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCCCAC----TGAAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTGCACCAGGATGGCACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCATTCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACCC----CCTACTTCCTGGACCTTT-CCCAGACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CTTACACTTT-----TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAAGTGACAG---AGAACAGACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCCGTGGA-GAATAAAATCTCCCAACGCCATTGTCTTGCACCTGGAAGGACG-CACGTGG-----GGCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 69687 1049 - 187378091 GCATCTGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAA----CTCCTCACCTGCCTCCCAACACTCACCTCCAGGGAGGAGCTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCTTTGCAATGGCAGACCACagtcctgggctggagtgcagatgcCAAGCCAATCTTGGCACTTCTCGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGAAGATGAGAACGTTGAGCGCCGGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--CATCTA-ACACCCTGATTGCTGATGCGGGGCTTCTCCCACCCCTCTCAGgccaccctccccactccccagacAAATCTCATTGGTGATTTCCTTTGAGCAAGGCTGGTAT-C--AGGGGTGATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGGAAAGCAGTTTCCCAC----TGAAGAAACCCCAAAGGGCAGCCCTCACTGGGCTTGCACCAGTATGGCACATCCTGG-GGGATGGAGGAT-------CAAGGCCAGGATCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAGCTTCATTCTCACAGCAGCCCCATCCTTTGCCCTGATTTCTCACCCACCC----CCCACTTCCTGGACCTTT-CCCA-ACACCCCCTTCAGACACCACACTGTAGTGAAACACTGCTACACA-----------TCTTCTGATCCAA------CTTACACTTT-----TCAAGAAAATAGGAAAG----CCTAGAACAGCAGATTGAAAGGAAGTGACAG---AGAACAGACGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCCGTGGA-GAATAAAATCTCCCAACGCCGTTGTCTTGCACCTGGAAGGACG-CACGTGG-----GGCACAATTGTCTCACACTTGGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGGCACACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAAAGA------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 421060 958 - 91754291 GCATCCGTTCCACTCCCGTTTCCTCTCCCCTCGGCACAGAAA----CTCCTCACCTGCCTCCCAACACTCACCTCCAGGGAGGAGTTGCCCACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTCTGCATTGCAATGGCAGACCACAGTCCTGGGCTGGAGGGCAGATGCCAAGCCAATCTTGGCACTTCTTGCTAGAATCTCCAGAGTGAATGGCTCCAACGACTTGGGTGTCCATAGCAACGTCCCATTCTCTGCCCCGGGGGAGATGAGAACGTTGAGAGCCAGGAGACTCCTCAGCTCTGTGGTCTGATGCATCCT--CATCCA-ACACCCTGATTGCTGGTGCGGGGCTTCTCCCACCCCTCTCAGGCCACCCTCCCCACTCCCCAGACAAATCTCATTGGTCATTTCCTTTGAGCAAGGCTGGTAT-C---GGGGTGATCCTGGTCACGCTCCCAGCTGGAAGGAGGTGGCACCAGTCCAACATACTGATTGTAACGGGGGACACCACAGAGGGAAAAGCAGTTTCCCAC----TGAAGAAACCCCAAAGGGCAGCCCTCGCTGGGCTTTCACCAGGATGGCACATGCTGG-GGGATGGAGGAT-------CAAGGCCAGGGTCCTCCAGGCACCTCCCCAGGCTATGCTGCCAGCCAAACCAG-------------------------------------------------------------------------------------------------ACTGTAGTGAAACACTGCTACACA--------------TCTGATCCAA------CTTACACTTT-----TCAAGAAAATAGGAAAACCTCCCTAGAACAGCAGATTGAAAGGAAGTGACAG---AGAACAGATGAACGCAATTTCCAGACCATCGTCCTCCAGGGATGGAGCCCGTGGA-GAACAAAATCTCCCAACGCCGTTGTTTTGCGCCTGGAAGGACG-CACGTGGGGCAAA-----ATTGTCTCACACCTAGGAGGACGCATGTGAGGCAAAAGGGATGTGGGCAAAGCAGTCCCTTCTGACATACGGAGAGAAAGAACGTCAGGCAGA-----GAGGCAATGA------ i chlSab2.chr15 C 0 I 8 s calJac3.chr17 938829 991 - 74750902 GCATCCCTTCAACTCCCATTTCCTCACCCCTTAGCACAGACA----CTAACCACCCTCCTCCCAACACTCACCTCAAGGGAGGAGCTGCCTACCCTGCTGGTCTGGTTGTACAAACACTGGCTCTTTGCACTGCAGTAGCAGACCATGGTCCTGGGCTGGAGTGCAGACGACAAGCCAGTCTTGGCACTTCTTGCTAGAATCTCCAGAGAGAATGGCTTCAGTGACTTGGGTGTCCACAGCAATGTCCCATTCTCTGCCCGGGGGAAAATGAGATCATTGAGAGCTGGGAGACTCCTCTGCTCCGTGGTCTGATGCATCCTGGCATCTA-ACACCCTGATTGCTGATGC-GGGCTTCCCCC-CCACTCTCAGACCACCCT-CCCCTGCCCCAGACAGATCTCACTGGTCATTTTCTTTGAGCAAGGCTGGTATGC--GGGGGTAATACTGGTCAAACTCCCAGCTGGAAGGAGGTAGCACCAGCCCAACTTACTGACTGTAGCAGGGGACTCCACAGAGGGGAAAGCAGTTTCCCCC----TGAAGAAACCCCAAAGGGCAGCCCCGCCTGGGCTTGCACTAGGATGGGACCTCCTGG-GGGATGCAGGAT-------AAAGGCCAGGGTCCTCCAGACACCTCCCCAGGCTATGCTGCCAGTCAAACTGGTTTCAGTCTCATGGCAGTCCCATACTTTTCCCTGATTTCTCACCCAC-C----CCCACTTCCTGGACCTTTGACCAGACAGCCCCTCCAG------------------------CGATATA-----------TCTTCTGATCAAA------TTTATATTTT-----TCAAGAAAATACGAAAGTCTCCTTAAAACAGCAGATTGAAAGGAAGTCAC----------AGATGAATGTAATTTCCAGACCCTCATTCTTCAAGGGTGGA-CCGGTGGA-GCAGAAAATCTCCCAGTGCCATTGTCTTACACCTGGGAGGACA-CACGGGG-----------------------------------------GGCAAAGGGGATGCAGGCAGAGCAGTCCCTTCTGACACACAGAGAGGAAGGAACTCAGGCACCCTCCTGAGGCAAAGG------ i calJac3.chr17 C 0 C 0 s mm10.chr16 65432809 863 - 98207768 GCATCC------------------CTCCACTTGCC-----------CGCCTCCCCCAGCCTCCACTACTCACCTCAAGGGAAGAATTGCCCTCTTTGCTGGTTTCATTGTACAAACACTGCTCCTCCTTACTGCAGAAGCAAGCCACGGTCTTGGGCTGGAGTACCCATGACAAGTTAGTCCTGACATCCCTCGCTAGAATCTCCAGGGTACACGCTTCTGGGGATGTTGGTGTCCACTGCAAACTCCCGTTTTCTGTCC-AGAGAAAAGGAGACC-TCAGTGTCTGGGGGAGCCCTCCGCTCTGTGGTCAG-TGCATCCTGGCATCTA-ACACTCGAACTACGGAGGT-GGTCTTCCCACACC---CTCAGG-CATCCT-----------------------------------TCTGAGTAGAGCTGGGGT-TCCCAGGGTGATGGTGGTCATGCTCCTAGCTGGAGGGAGGCAGCACCTGCTGAACATGCTGGGTGTAGGTAGAAATA-CACATAAGGGAAGGCTACCCACCCCCTAATGAAGAGGCCCCTGAATGCATCCCTGCCTGTGGCTGTACCAGGATGGGTCATGATGG---------GGAC-------CAAG--CATGGTCCTCTTAACACATCCCCAAACTTCAGTG-----TGGAATGGCTTCACCTCC----CAGCCTC-TCTTCTGCCTTTTTAACGTCCCGTCCT----CTGACTTTCCAGGCCTGG-----GATACCTC-------------------------------------------------------ATCAAA---------------T-----GTCAGAATACAGAGAAT--------AAAGAACAGCTTGGAAGGAACAGAGAGTA-GGGGTGGAAGGGAGTTAACTTCATACCATCGATTTTCAGG---ATGCCCAGGGTG-GCAGAAAGCCGTGTAATGCCACTG---CATGCCAAGGTTGTGC-CATAAGG-----------------------------------------AACAAAGAACGTGT-GACGGAGTGACCCCTCCGTGCCCAGAAAAGCAAAAGGAGATAGTTTGG-----TGGTCA---------- i mm10.chr16 I 2 C 0 s canFam3.chr33 29070475 974 + 31377067 ACATCGCTTCCGTTCCCACTGCCTTTCCCCTCAACAAGGAAGTCTCCCTCCCACCCTCCTCCTTTCACTCACCTCCAGGGAGGAATTGCCCATCCAGCCCGTCTGATTATATAGACACTGGCTCCTGTCCTTGCAAGCGCAGACCACTGTCCTTGGCTGGAGCACAGATGACAAGTTGACTTTGACGTTTCTTGCTAGAATCTCCAGGGTGAATGGTTCCAAGGACTTTGGTGTCCACAGCAGTGTCCCGTTCTCTGCCCCAGGGAAGACAAGACCGTT-AGGGCTGGGGGCCTCGGCTGCT-TGCTGTCTGACACGTCCT----------------GAGAGCTGATGTGGGCCTTTCTCTGCCTCTCTCAGGCCACCCCTC--------------AAAGTCATCAGGCATTTCCT-TGAGCTCGGCTGGCTT-C-CTGGAGTGATCTTGGTC--GCCCCACGCT----GGAGGTAGCATGAGCCCCACTGAGTGATTGCAG-GTGGAACTCCAGAGAGGG-AAGGCAGTTGCCCCC----TGAAGAGAT--------GCAACCCTGCCCAGGCCTGCACCGGGACGGGACATCTAGGAGGGACAGAGAATAAGGCCCCAAGGCTAGGATCCCCTTGATGCTTCCCCAGGCTACCCTGTAGGCAAAACTGGCTTCCCCTTCACAGCAGCCCCATCCCTGGCCCTGATTTCTTGCCCACCCTCCTCCCGCTTCTTGCACCTTT----------GACCTTCAGACACCAGACTACAGTGAAACGCTGCTACGTATCAGCAAGGACTCTTCTGATCCAAAGGTGTCTTATGGTTTGTCTCTTACG-------GAAAGTCTCCTTAAAACAGCAGGTTGAGAATCGTTGATAGTAGGGGACAGACAAGAGCAGCTCCCAGACTATCACTCTTCAGGAGAGGAGCCCAGGGAGGGAGAAAATCTCCTG-----ATTGGCTGGCACCTGGGAGGCTGCCACCTGG-----------------------------------------CGCCAAAGGG-----CGCAAAG------------------AGAAAGAAAGAAAATGGGCCAGA-----GAG----AGGTGCTCT i canFam3.chr33 C 0 C 0 a score=17110.000000 s hg38.chr3_KI270935v1_alt 128569 10 + 197351 GAACGCAAAA s panTro4.chr3_GL389630_random 91843 10 + 103936 GAACGCAGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199786560 10 + 202140232 GAACGCAGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875341 10 + 123690457 GAACGCAGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38108 8 + 111706 -AATGCAGA- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73355 8 + 192460366 -AATGCAGA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 70736 8 - 187378091 -AATGCAGA- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 939820 10 - 74750902 GAACGCAGAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65433672 10 - 98207768 GAGTCCAGAG i mm10.chr16 C 0 I 1 s canFam3.chr33 29071449 10 + 31377067 GAGCTCAAAA i canFam3.chr33 C 0 C 0 e chlSab2.chr15 422018 8 - 91754291 I a score=136890.000000 s hg38.chr3_KI270935v1_alt 128579 72 + 197351 -TATG-CCCCCC-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCTCAGAATTAGTGCTGGCAACAGACAGAAAGT s panTro4.chr3_GL389630_random 91853 73 + 103936 -TATGCCCCCCC-AGGGCTTTGGTTTAGCCAAGAACAGTCACCCTCAGAATTAGTGCTGGCAACAGACAGAAAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199786570 72 + 202140232 -TATG-CCCCCT-GGGGCTTTGATTTAGCCAAGAACAGTCACCCGCAGAATTAGTGCTGGCAACAGACAGAAAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875351 45 + 123690457 -TATG-CCCCCT-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCGCAG--------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38116 45 + 111706 -TATG-CCCCCT-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCACAG--------------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73363 45 + 192460366 -TATG-CCCCCT-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCACAG--------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 70744 45 - 187378091 -TATG-CCCCCT-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCACAG--------------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422026 45 - 91754291 -TATG-TCCCCT-GGGGCTTTGGTTTAGCCAAGAACAGTCACCCACAG--------------------------- i chlSab2.chr15 I 8 C 0 s calJac3.chr17 939830 63 - 74750902 -CACG-CTCCCTGGGGGCTTTGGTTTAGCCAAGAACAGCCA-CCGCAGAATTAGTGCTGGCAACAG--------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65433683 44 - 98207768 -CAGG-TCCCTG-ATGATTCTGGTTTAGCAAAGAA-AGTCACCATCCC--------------------------- i mm10.chr16 I 1 C 0 s canFam3.chr33 29071459 73 + 31377067 TAAGG-TCCCTA-ATGGCTTTAGTTTAGCAAAGAATAGTCTTTAGCATAAGTGGTGCTGGCAACTGAAGGGAAGT i canFam3.chr33 C 0 I 192 a score=22541.000000 s hg38.chr3_KI270935v1_alt 128651 43 + 197351 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC s panTro4.chr3_GL389630_random 91926 43 + 103936 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199786642 43 + 202140232 GGCATCCCTTTGATGCCCTTGGACCCTTTGAATTAGTGCTGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875396 13 + 123690457 ------------------------------AATTAGTGCTGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38161 13 + 111706 ------------------------------AATTAGTGCTGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73408 13 + 192460366 ------------------------------AATTAGTGCTGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 70789 13 - 187378091 ------------------------------AATTAGTGCTGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422071 13 - 91754291 ------------------------------AATTAGTGCTGGC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65433727 4 - 98207768 ---------------------------------------TTCC i mm10.chr16 C 0 C 0 e canFam3.chr33 29071532 192 + 31377067 I e calJac3.chr17 939893 0 - 74750902 C a score=978643.000000 s hg38.chr3_KI270935v1_alt 128694 303 + 197351 AACAGACGAAAGCAGCGTCCCTTGTGC--TTGGAGCCTTTGGCCCTGATCATGGATGTAGGGCTCGGGGTCTCTAACACCTTTACGGAGAGGGAGCGATGGCACTCTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACATGGTTGCCAGAC--AAAAAGAGCAAGAAAGGTACCAAACGAAAGTATTTTTCATATTTCTTTAAATCTTGTCCTACATTAGAGCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT s panTro4.chr3_GL389630_random 91969 303 + 103936 AACAGACGAAAGCAGCATCCCTTGTGC--TTGGACCCTTTGGCCCTGATCATGGATGTAGGGCTCGGGGTCTCTAACACCTTTACGGAGAGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACATGGTTACCAGAC--AAAAAGAGCAAGAAAGGCACCAAACGAAAGTATTTTTCATATTTCTTTAAATCTTGTCCTACACTAGAACCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199786685 303 + 202140232 AACAGACGAAAGCAGCATCCCTTGTGC--TTGGACCCTTTGGCCCTGATCATGGATGTAGGGCTCAGGGTCTCTAACACCTTTACGGAGAGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGACAAGGAGAGACACGGC--TAGGTAAACATGGTTACCAGAC--AAAAAGAGCAAGAAAGGTACCAAACAAAAGTATTTTTTATATTTCTTTAAATCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875409 305 + 123690457 AATGGACGAAAGTGGCATCCCTTGTGC--TTGGACCCTTTCGCCCTGATCATGGATGTAGGGCTCGGGGTCTCTAACACCTTTACGGAGAGGGAGCGATGGCACTTTACTGGGTCCTAGCCCAGGAAACCAGGCAAGGAGAGACATGGCTATAGGTAAACATGGTTACCAGAC--AAAAAGAGCGAGAAAGGTACCAAACAAAAGTATTTTTTATATTCCTTTAAATCTTGTCCTACATTACATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38174 302 + 111706 AACAGGC---AGCGGCATCCCTTGTGC--TGGGACCCTTTGGCCCTGATCGTGGATGCAGGGCTCAGGGTCTCTAACACCTTTATGGAGAGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACACGGTTACCAGACATAAAAAGAGCAAGAAAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73421 302 + 192460366 AACAGGC---AGCGGCATCCCTTGTGC--TGAGACCCTTTGGCCCTGATCGTGGATGCAGGGCTCAGGGTCTCTAACACCTTTATGGAGAGGAAACGATGGTACGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACACGGTTACCAGACATAAAAAGAGCAAGAAAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 70802 302 - 187378091 AACAGGC---AGCGGCATCCCTTGTGC--TGGGACCCTTCGGCCCTGATCGTGGATGCAGGGCTCAGGGTCTCTAACACCTTTATGGAGAGGAAGCGATGGTATGTTACTGGGTCCTAGCCCAGGAAATCAGACAAGGAGAGACACAGC--TAGGTAAACACGGTTACCAGACATAAAAAGAGCAAGAAAGGTAccaaatgaaagtattttttatatttctttaagtcTTGTCCTACATTAGATCCTTCctttaatagatataaaaatgttGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422084 298 - 91754291 AACAGGC---AGCGGCATCCCTTGTGC--TGGGATCCTTTGGCCCTGATCGTGG----AGGGCTCAGGGTCTCTCACACCTTTATGGAGAGGAAGCGATGGTACGTTACTGGGTCCTAGTCCAGGAAATCAGGCAAGGAGAGACACAGC--TAGGTAAACACGGTTACCAGACATAAAAAGAGCAAGAAAGGTACCAAATGAAAGTATTTTTTATATTTCTTTAAGTCTTGTCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGTAAATTGGTCATT-TTAAA-TGTTGCACTTGATTATTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 939893 298 - 74750902 -ACAGAG---AGCGGCATCCCCTATTCTTTGAGACCCTTTGGCCCTGATCATGGATGCAGGTCTTGGAGTCTCTAACACCTTTACAGAGAGGGACCCGTGACGCCTTACTGGGTCCTA-TCCAGGAAACCAGACGAGGAGAGACACAGC--TAGGTTAACATGGTTACCACAGACAAAAAGAGCAAGAAAGGTAGTAAACAAAAGTATTTTT-ATATTTCTTTAAATTT--TCCTACATTAGATCCTTCCTTTAATAGATATAAAAATGTTGT-AACTGGTAATT-TTAAACTGTTGCACTTGATT-TTCT i calJac3.chr17 C 0 C 0 s mm10.chr16 65433731 257 - 98207768 AAC--------------------------TTTGGCCCTTCAATCCAGCTGCCAG--------CCCAGGTTCTCAGATCCCATTACTAAGAAGGGAAGA-ATTGTGTTA----GTCCCAATCCAGAAAATCAGACAAGGAGACAGAAAAC--CAGATAAGCATAGCTAATGGCCATAAAAACAAC--GAAAAGTACC-AGTGAAGCTATT-----TATATGTTTTGATCTCATTCCACAGTGTGTTATTCATTTAATAGATATGATAATGCTTTAAACTCATTGGT-TT----TATCACATTTATTTATCTT i mm10.chr16 C 0 I 1951 s canFam3.chr33 29071724 297 + 31377067 AAAGAAGGGAAGTTGCATCCTGTGGGC--TTTGACTTTTCCACCCAGGTCACGGTTTTAGGACGAGGGGTCTCC-ACACCAGTACTGACAGGCAGAAATGAGGCTTTGCTTGGTCCCAGTACAGAAGAGCA-ACAGGGAGAGACAGAGT--TGGGCAATCGTGGTTGACCGACATAAAAATAATGAGAACCACGCCGAATGAAGCTATT-----TATACCTTTAAATCCTGTTCCACGTGATAGCCTTCTTTTAATAGATTTGAAAATGCTTTAGATCAGTATTTGTTAAATTGTTACACTCTATTCT--- i canFam3.chr33 I 192 C 0 a score=120503.000000 s hg38.chr3_KI270935v1_alt 128997 40 + 197351 AATAATTTGGTGAATGCATA---A---TGACTAAAGATGACTATAT s panTro4.chr3_GL389630_random 92272 37 + 103936 AATAATTTGGTGAATGC------A---TGACTGATGATGACTATAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199786988 40 + 202140232 AATAATTTGGTGAATGCATA---A---TGACTAAAGATGACTGTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875714 40 + 123690457 AATAATTTGGTGAATGCATA---A---TGGCTAAAGATGACTGTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38476 40 + 111706 AATACTTTGGTGAATGCATA---A---TGATTAAAGATGACTGCGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73723 40 + 192460366 AATACTTTGGTGAATGCATA---A---TGATTAAAGATGACTGCGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71104 40 - 187378091 AATACTTTGGTGAATGCATA---A---TGATTAAAGATGACTGCGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422382 40 - 91754291 AATACTTTGGTGAATACATA---A---TGATTAAAGATGACTGCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940191 43 - 74750902 AATAATTTGGTGAATGCATAAGGA---TAATTAAAGATGACTGCAT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29072021 43 + 31377067 AGTAATTCGGTGACCGCATC---AAGCTGGTTAAAGATGATCGTGT i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I a score=88696.000000 s hg38.chr3_KI270935v1_alt 129037 27 + 197351 ATGATCAGATTGAGATTAAATGATCTT s panTro4.chr3_GL389630_random 92309 27 + 103936 ATGATCAGATTGAGATTAAATGATCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199787028 27 + 202140232 ATGATCAGATTGAGATTAAATGATCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875754 27 + 123690457 ATGATCAGATTGAGATTAAATGATCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38516 27 + 111706 ATGATCAGATTGAGATTAAATGATCTT i rheMac3.chrUn_JH291127 C 0 I 528 s macFas5.chr2 73763 27 + 192460366 ATGATCAGATTGAGATTAAATGATCTT i macFas5.chr2 C 0 I 15 s papAnu2.chr2 71144 27 - 187378091 ATGATCAGATTGAGATTAAATGATCTT i papAnu2.chr2 C 0 I 14 s chlSab2.chr15 422422 27 - 91754291 ATGATCAGATTGAGATTAAATGATCTT i chlSab2.chr15 C 0 I 14 s calJac3.chr17 940234 27 - 74750902 ATGATCAGATTGAGATTAAATAATCTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072064 0 + 31377067 C a score=76975.000000 s hg38.chr3_KI270935v1_alt 129064 48 + 197351 CAAAtc-------------tt---------ttttttgagacagagtctcgctctgtca-ccaggctggagt s panTro4.chr3_GL389630_random 92336 61 + 103936 CGAAtcttttttttttttttt---------ttttttgagacagagtctcgctctgtca-ccaggctggagt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199787055 55 + 202140232 CGAAtc------ttttttttt---------ttttttgagacagagtctcactctgtca-ccaggctgaagt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875781 54 + 123690457 CGCAtc-------tttttttt---------ttttttgagacagagtcttgctctgtca-ccaggctggagt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 73805 49 + 192460366 -------------ttgttttt---------ttttttgagatggagtcttgctctattgcccaggctggagt i macFas5.chr2 I 15 C 0 s papAnu2.chr2 71185 58 - 187378091 -------------ttgttttttgttttttgttttttgagatggagtctcgctctattgcccaggctggagt i papAnu2.chr2 I 14 C 0 s chlSab2.chr15 422463 55 - 91754291 -------------tttttctt---tttctttttttcgagatggagtctcgctctattgcccaggctggagt i chlSab2.chr15 I 14 C 0 s calJac3.chr17 940261 55 - 74750902 TGAATT-------AGttcctt---------tttattgagacagaatcttgctctgttgctcaggctggagt i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 38543 528 + 111706 I e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072064 0 + 31377067 C a score=113004.000000 s hg38.chr3_KI270935v1_alt 129112 36 + 197351 gcagtgacgcgatctcagctcactgcaacatctgcc s panTro4.chr3_GL389630_random 92397 36 + 103936 gcagtgacgcgatctcagctcactgcaacatctgcc i panTro4.chr3_GL389630_random C 0 M 702 s ponAbe2.chr3 199787110 36 + 202140232 gcagtgatgtgatctcagctcactgcaacatctgcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875835 36 + 123690457 acagtgacgcgatctcagctcactgcaacatctgcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39071 36 + 111706 gcagtgacgcgatctcagttcactgcaacatctgcc i rheMac3.chrUn_JH291127 I 528 C 0 s macFas5.chr2 73854 36 + 192460366 gcagtgacgcgatctcagttcactgcaacatctgcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71243 36 - 187378091 gcagtgacgcgatctcagttcactgcaacatctgcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422518 36 - 91754291 gcagtgatgcgatctcagttcactgcaacatctgcc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940316 36 - 74750902 acagtgactcgatctcggctcacggcaacatctgcc i calJac3.chr17 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072064 0 + 31377067 C a score=27318.000000 s hg38.chr3_KI270935v1_alt 129148 10 + 197351 tcctgggttc s ponAbe2.chr3 199787146 10 + 202140232 tcctgggttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875871 10 + 123690457 tcctgggttc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39107 10 + 111706 tcctaggttc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73890 10 + 192460366 tcctaggttc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71279 10 - 187378091 tcctaggttc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422554 10 - 91754291 tcctaggttc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940352 10 - 74750902 tcccgggctc i calJac3.chr17 C 0 C 0 s canFam3.chr33 29072064 10 + 31377067 TACTGGGTTT i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e panTro4.chr3_GL389630_random 92433 702 + 103936 M a score=371705.000000 s hg38.chr3_KI270935v1_alt 129158 174 + 197351 -aagcgattctcctgcctcagtctcctgagtagctgggattacaggcatgcaccaccatgcctggcttttttttttttttttgtatttttagtacagacggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccgcccacctcggcctcccaaagc s ponAbe2.chr3 199787156 167 + 202140232 -aagtgattctcctgcctcagtctcctgagtagctgggattacaggcatgcaccaccatgcccggc-------tatttttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatcctcctgcctcggcctcccaaagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120875881 167 + 123690457 -aagcgattctcctgcctcagtctcctgaagagctgggattacaggcatgcaccaccacgcccggc-------tatttttttgtatttttagtagagacggggtttcaccatgttggccagactggtctcgaactcctgacctcagatgatccgcccgcctcggcctctcaaagc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39117 167 + 111706 -aagcgattcttctgcctcagtctcccgaagagctgggattacaggcacccgccaccatgcctggc-------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 73900 167 + 192460366 -aagcgattcttctgcctcagtctcccgaagagctgggattacaggcacccgccaccatgcctggc-------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71289 168 - 187378091 aaagagattcttctgcctcagtctcccgaagagctgggattacaggcacccgccaccatgcctggc-------tatttttttgtttttttagtagagatggggtttcaccgtgttggccaggctggtcttaaactcctgacctcagatgatccacccgcgtcggcctcccaaagt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422564 167 - 91754291 -aagcgattcttctgcctcagtctcccgaagaactgggactacaggcacccgccaccatgcctggc-------tatttttttgtttttttagtagagatggggtttcactgtgttggccaggctggtcttaaactcctgacctcagatgatccacctgcgtcggcctcccaaagt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940362 166 - 74750902 -aagtgattctcttgcctcagcctcccaagtaactgggattacaggcgcctgccactacgcctggc-------ta-tcttttatatttttagtacagaagggctttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacccaccgtggcctcccaaagt i calJac3.chr17 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e canFam3.chr33 29072074 0 + 31377067 C e panTro4.chr3_GL389630_random 92433 702 + 103936 M a score=261962.000000 s hg38.chr3_KI270935v1_alt 129332 111 + 197351 gctgg----gatgacaggcatgagccaccgcgcccagccTTGAATCAGTTCTATGTGCCCAGAGTCACTCTAGCTATCTGGCCAAA-CCGCCGTAAGCCCGTCACTACTACTTACT s ponAbe2.chr3 199787323 111 + 202140232 actgg----gatgacaggtgtgagccactgtgcccagccTTGAATCAGTTCTATGTGCCCAGAGTCACTCTAGCTATCTGGCCAAA-CTGCCATAAGCCCGTCACTACTACTTACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876048 111 + 123690457 tctga----gatgacaggcgtgagccaccgcgcccggccTTGAATCAGTTCTGTGTGTCCAGAGTCACTGTAGCTATCTGGCCAAA-CCGCCATAAGCCCGTCACTACTACTTACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39284 111 + 111706 gctgg----gatgacaggcctgagccaccacgcccagccTTGAATCAGTTCTATGTGCCCACATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTACTACTTACT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74067 111 + 192460366 gctgg----gatgacaggcctgagccaccacgcccagccTTGAATCAGTTCTATGTGCCCACATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTACTACTTACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71457 111 - 187378091 gctgg----gatgacaggcatgagccaccgcgcccagccttgaatCAGTTCTATGTGCCCAGATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTACTACTTACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422731 111 - 91754291 gctgg----gatgacaggcatgagccaccgcgcccagccTTGAATCAGTTCTATGTGCCCAGATTCACTCTACCTATCTGACCAAA-TCACCATAAGCCTGTCACTACTACTTACT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940528 116 - 74750902 gctaggtgtgaggacaggtgtgagccactgtgcccagccTTGAATCTGTCCTATGTGCCCAGAGTCACTCTACCTATCTGGCCAAATTCACCATAAGCCTGTCATTACTACTTACT i calJac3.chr17 C 0 I 332 s canFam3.chr33 29072074 88 + 31377067 GGTGG----AATGAC----------------------CTTTGAATCACTTGCGCGGGCCC-GAGACAGCTTTGCTCGCTGGCCAGA-CTTCCAGAAGGCCATCGCTGCTGTTCACT i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e panTro4.chr3_GL389630_random 92433 702 + 103936 M a score=24160.000000 s hg38.chr3_KI270935v1_alt 129443 7 + 197351 GGGGGGC s ponAbe2.chr3 199787434 7 + 202140232 GGGGGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876159 7 + 123690457 GGGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39395 7 + 111706 GGGGGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74178 7 + 192460366 GGGGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71568 7 - 187378091 GGGGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422842 7 - 91754291 GGGGGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940976 7 - 74750902 GGGGGGC i calJac3.chr17 I 332 C 0 s canFam3.chr33 29072162 6 + 31377067 -GGGGGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I e panTro4.chr3_GL389630_random 92433 702 + 103936 M a score=112460.000000 s hg38.chr3_KI270935v1_alt 129450 34 + 197351 ACCTATTTGAGTTATAGATATCGCTCCTCGGAAA s panTro4.chr3_GL389630_random 93135 34 + 103936 ACCTATCTGAGTTATAGATATCGCTCCTCGGAAA i panTro4.chr3_GL389630_random M 702 C 0 s ponAbe2.chr3 199787441 34 + 202140232 ACCTATTTGAGTTACAGGTATCGCTCCTCGGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876166 34 + 123690457 ACCTATTTGAGTTATAGGTATCGCTCCTCGGAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39402 34 + 111706 ACCTATTTGAGTTATACGTATCGTTCCTCAGAAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74185 34 + 192460366 ACCTATTTGAGTTATACGTATCGTTCCTCAGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71575 34 - 187378091 ACCTATTTGAGTTATATGTATCGTTCCTCAGAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422849 34 - 91754291 ACCTATTTGAGTTATATGTATCGTTCCTCAGAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 940983 34 - 74750902 ACCTATTTGAGTTATAGGTATCATTCCAAAGAAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29072168 33 + 31377067 ACCTATCTGAATCATAGGGATCATT-CTCGGAAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65433988 1951 - 98207768 I a score=2169090.000000 s hg38.chr3_KI270935v1_alt 129484 655 + 197351 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTGTAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCACTCTCCCCAGCCAGCCAAATAGTCCTACCAAAGAGCTCCAAGTCGGTGCAGCTGTCTCTGAGCGTGAAGTTGGCATCCTCAGCATTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAATCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACAAAG----AGGGAATGGGGGTTCCGAGGCAGGACAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCTCTCCCCCCACCTCCTCAAAAAGAG-CTCCTTTCAGATTCTTTCCTGAAC-ACAGTGCTATGCTGGGTATGACAA----------------AAAGTGAATTAGAGAGCAGATTTGTTTGGACCATTACAAAGGGTTGTACCCTTAGACCAA--AGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG s panTro4.chr3_GL389630_random 93169 634 + 103936 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTGTAGCAATGCAGAATTTCCC---AAA-TTTGACTCTGACCTCATCCCCTACCCACCTCCCCGCTCTCCCCAGCCAGCCAAATATTCCTACCAAAGAGCTCCAAGTCAGTGCAGCTGTCTCTGAGCGTGAAGTTGGCATCCTCGGCGTTGCTAGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGAACTGATCTGAAACACAGAG----AGGGAACGGGGGTTCCGAGGCAGGACAGTCTCCCGCTTCATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTGTGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACCGCCCACCTAGCCAAATCTTTAGC--CTCTTTCTCTCCCCCCACCTCCTCAAAAAGAG-CCCCTTTCAGATTCTTTCCTGAAC-ACAGTGCTATGCTGGGTATGACAA----------------AAAGTGAATTAGAGAGCAGATTTGTTTAGACCATTA---------------------CAA--AGGGTTGTACCTTTGGCAAAGGGCTGAAAACCTGAAGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199787475 629 + 202140232 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTGTTGCTGGGTACAGCAATGCAGAATTTCCC---AAAGTTTGACTCTGACCTCATCCCCTACCCACCTCCCCACTCT----AACCAGCCAAATATTCTTACCAAAGAGTTTAAAGTCGGTACAGCTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCATTGCTGGTGTACTGAATCTGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACAAAG----AGGGAATGGGAGTTCCAAGGCAGGACAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTATGAGGCATTCCCAGGACTGTGACCCACCTCTGGAAGAAGGAGTTATTCTGTGTACCTGCTCT-C-GACTGACACACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCTCTCCCCCAACCTCCTCAAAAAGAG-CTCCTCTCAGATTCTTTCCTGGAC-ACGGTGCTATGCTGGGTATGACAA----------------AAAGTGAATTAGAGAGCAGATTTGTTTAGACCATTA---------------------C----AGGGTTGTACCTTTGGCAAAGGACTGAAAACCTGAAGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876200 631 + 123690457 TGCCGGTCCTGGATATTCGAAT-----GAAAGATTGACAGCAAGTGTTGCTGGGTACAGCAGTGCAGAATTTCCC---AAAGTTTGACTCCGACCTCATCCCCTACCCACCTCCCCACTCTCCTCAGCCAGCCAAATATTCTTACCAAAGAGCTTAAAGTCGGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCTGCATTGCTGGTGTACTGAATCAGCGTGATCTGCCCCTTGTAGGCTTCAACCACATGACTACCATTGATGGAGGGTGGGTACTGATCTGAAACACAAAG----AGGGAATGGGAGTTCCCAGGCAGGACAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTGTGAGGCTTTCCCAGGACTGTGACCCATCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GAGTAACGCACAGCAGACGGGGACTGTACTGCCCACCTAGCCAAATCTTTAGC--CTCTTTCTCTCCCCCCACCTCCTC--AAAGAG-CTCCTTTCAGATTCTTTCCTGAAC-ATGGTGCTATGCTGGGTATGACAA----------------AAAGTGAATTAGAGAGcagatctgtttagaccatta---------------------c----agggttgtacctttggcaaagggctgaaaacctgaaggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39436 628 + 111706 TGCTGGTCCTGGATATTCAAAT-----GAAAGAGTGATGGCAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCAT-CCCTACCCACCTCCCCACTCTCC----CCAGCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTCCAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACATGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACAAAG----AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---ATATAATATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCCGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCTCTCCCCCAGCCTCCTCCAAAAGAG-CTCCTTTCGGATTCTTTCCTGAAC-ATGGTGCTATGCTGGGTGTGACAA----------------AAAGCGAATTCGAGAGcagatttgtttagaccgtta---------------------c----agagttgtaccttcggcaaagggctgaaaacctgaaggg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74219 628 + 192460366 TGCTGGTCCTGGATATTCAAAT-----GAAAGAGTGATGGCAAGTTTTGCTGGGTATAGCGATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCAT-CCCTACCCACCTCCCCACTCTCC----CCAGCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTCCAGTTGTCTCTAAGTGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACATGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACAAAG----AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---ATCTAATATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCCGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTTTAGC--CTCTCTCTCTCCCCCAGCCTCCTCAAAAAGAG-CTCCTTTCGGATTCTTTCCTGAAC-ATGGTGCTATGCTGGGTATGACAA----------------AAAGCGAATTCGAGAGcagatttgtttagaccatta---------------------c----agagttgtaccttcggcaaagggctgaaaacctgaaggg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 71609 630 - 187378091 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACAGCAAGTTTTGCTGGGTATAGCAATGCAAAATTTCCC---AAAGTTTGACTCTGACCTCATCCCCTAcccacctccccactctcc----ccagcCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGTTGTCTCTGAGCGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAACCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACAC-AAG----AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTGTGAGGCATTCCCAGGACTGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTttagcctctctctctctcccccagcctcctcaAAAAGAG-CTCCTTTCGGATTCTTTCCTGAAC-ATGGTGCTATGCTGGGTATGACAA----------------AAAGTGAATTAGAGAGCAGATTTGTTTAGACCATTA---------------------C----AGAGTTGTACCTTCGGCAAAGGGCTGAAAACCTGAAGGg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 422883 630 - 91754291 TGCCGGTCCTGGATATTCAAAT-----GAAAGAGTGACGGCAAGTTTTGCTGGGTATAGCAATGCAAAATTTCCC---GAAGTTTGACTCTGACCTCAT-CCCTACCCACCTCCCCACTCTCC----CCAGCCAAACATTCTTACCAAAGAGCTTAAAGTCAGTACAGCTGTCTCTGAGTGTGAAGGTGGCATCCTCAGCGTTGCTGGTGTACTGAATCAGCGTGGTCTGCCCCTTGTAGGCTTCAATCACACGACCACCATTGATGGAGGGCGGGTACTGATCTGAAACACAAAG----AGGGGATGGGGGTTCCGAGGGAGGGCAGTCTCCTGCTTTATCAGCCTCCTCTCTTTC--TCAA---CTCTAATATGTGTGAGGCATTCCCAGGATGGTGCCCCACCTCTGGAAGAAGGAATTATTCTGTGTACCTGCTCT-C-GACTGACGCACAGCAGGCTGGGACTGTACTGCCCACCTAGCCAAATCTTTAGCCTCTCTCTCTCTCCCCCAGCCTCCTCAAAAAGAG-CTCCTTTCGGATTCTTTCCTGAAC-ATGGTGCTATGCTGGGTATGACAA----------------AAAGCGAATTAGAGAGcagatttgtttagaccatta---------------------c----agagttgtacctttggcaaaggactgaaaacctgaaggg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 941017 630 - 74750902 TGCCAGTCCTGGATATTCAAAT-----GAGCAAGTGACAGGAAGTTTTGCTGGGTATAGCGATGCAGAA-ATCCC---AAAGTTTGATTCCGACCTCATTCCCTACCCACCTCCCCACTTTCC----CCAGTCAAACATTCTTACCGAAGAGCTTCAAGTCAGTACAATTGTCTCTGAGCATGAAGGTGACATTCTCAGCATTGCTGGTGTACTGAATCAGCACGGTCTGCCCCTTGTAGGCTTCAACCACATGGCGACCCTCGATGGAGGGTGGGTACTGATCTGAAAGACAAAG----AGGGGATGGGGGTTCCGAGGTGGGACAGTCTCCTGCTTCATCAGCCTCCTCTCCTTC--TCAA---CTACAAGATACGTGAGGCATTCCCAGGACTGGGACCCACCTCTGGAAGAAGGAACTATTCTGGGTACCTGCTCT-CAGACCGATGAACAGCAGGCTGGGACTGTGCTGCCCACCTATCCAAATCTTCAGC-TCTCTTTCTCTCCCCC-ACCTCCTCAAAAAGAGTTTCCTTTCATATTCTTTCCTGAAC-ACAGTGCTATGCCGGGTGTGGCAA----------------AAAGTGAATTACAGAGCACGCTTgtttagatcatca---------------------c----agagttgtgcctttggcaaagggctgaaaacctggaggg i calJac3.chr17 C 0 I 452 s mm10.chr16 65435939 618 - 98207768 TGTTGGTCTTGATTATTCAAATTAAAAAAAAAAGAGGCAGGGCACTGTACAGAATAAAGAGACGTAAGGCAGCCC---AAG--ATGACTCC---------------------TCCCATCCTAT--TGCCAGCCAAAGATTCATACCAAAGAGCTTAAAGCCACTACATTTCTTGGAGAGGCTGAGTGTGGCATCCTTAGAGTTGCTGGTGATCTCAGTGGTCACTGTCTGCCCCTTGTAGGCTTGAATCTTGCTGCTGCAGTTGATAGAGGGTGGGTACTGATCTGAAACAGAGAAGCACGGAGACTAGTTATTC----ACAGGGCGCTCTCCACTCTTCCC--TTTCTGCTCTTTC--CCCA---TGACTCTTCCTCCGAGTCCTTACCACGCCTGCGGCCGGCCTCTGGGAGCAGAACTCAGTCTTCCTCTGTGCTCTGC-AAATGGTGCCGAGCATGTTGGGTTTGTGCTGCCCACT--GTCTAACCTTTAGACTCCCTTTTCCTTTCCTTTTCTTTTTGTATATA--TTCTTTTAAAATTA------GAACTGtatttttattgtgtgtacgtcaatgtttttgcttgtatgtacgtgtgtcggtgtgaagg--tgttggatccattg---------------------caactggagttaaagat--ggttgtgagctg----ccatgtggg i mm10.chr16 I 1951 C 0 s canFam3.chr33 29072201 604 + 31377067 TGCTGGTCCTAGATATTCCGGT-----GGAAAAGTGACATGAAATTGCCCAGGGCGTGATAATGCAAAATTACCTTAAAAAGCTTGACTCTGAGCTCATCCCTT----------CCACCC-------GCACCCAAGGGCTCTTACCGAAGAGCTTGAAGTCACTATTGCTGTTCCTCAGAGTGAATGTGACGTGCTCAGGGTGGCTGGTGTACTGAACCAGCGTGGTCTGCCCCAGGTAGGCTTGCACCGCCTGTGGACCCTCGATCGACGGGGGGTACTCATCTGAAACACAAAC----AGGAGATTCGGGTTTGGGGGCAGGACACTCTCTTGCCTCATGGGCCTCGTCTCTCTCTGTCTAGTCCTCTGGTTTGTGGGAGGTGTTCTCAGGGCTAGGACCCACCTCTGGAAGCAGGAATTACTCCATGTACCTGCTTT-CAGATTTCTGTAGAGCAGGTGGGGGTTGAATTGCCCACCTGGCCAAATCCTTACC--CTCGCTTTATCTTCC---CTCCCCAGACAGGG-TTCAGGTCAAGCTCTCTCCTGATC-AGAGCGCTCTGCTGGGCGTGGTAC----------------AAAGTGAATCAggaaccagggttattcagaccatca---------------------c----agagttttgcccttggaagag------------------ i canFam3.chr33 C 0 C 0 a score=20704.000000 s hg38.chr3_KI270935v1_alt 130139 13 + 197351 TGCTG-----ggtgtctc s panTro4.chr3_GL389630_random 93803 13 + 103936 TGCTG-----ggtgtctc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788104 13 + 202140232 TGCTG-----Agtgtctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876831 13 + 123690457 tgctg-----ggtgtctc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40064 18 + 111706 tgccgggcgtggtgtctc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74847 18 + 192460366 tgccgggcgtggtgtctc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 72239 18 - 187378091 tgccgggcgtggtgtctc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 423513 18 - 91754291 tgccgggcgtggtatctc i chlSab2.chr15 C 0 C 0 s mm10.chr16 65436557 9 - 98207768 tgcta-----gaaa---- i mm10.chr16 C 0 C 0 s canFam3.chr33 29072805 13 + 31377067 ggcta-----ggagccac i canFam3.chr33 C 0 C 0 e calJac3.chr17 941647 452 - 74750902 I a score=83379.000000 s hg38.chr3_KI270935v1_alt 130152 31 + 197351 atgtctgtaatcccagcactttgggaggccg s panTro4.chr3_GL389630_random 93816 31 + 103936 atgtctgtaatcccagcactttgggaggccg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788117 31 + 202140232 atgtctgtaatcccagcactttgggaggccg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876844 31 + 123690457 atgcctgtaatcccagcactttgggagaccg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40082 31 + 111706 atgcctgtaatcccagcactttgggaggccg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 74865 31 + 192460366 atgcctgtaatcccagcactttgggaggccg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 72257 31 - 187378091 acgcctataatcccagcactttgggaggccg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 423531 31 - 91754291 atgcctgtaatcccagcactttgggaggccg i chlSab2.chr15 C 0 C 0 s mm10.chr16 65436566 26 - 98207768 ----ctg-aacccaggtcctctggaagaacg i mm10.chr16 C 0 I 105 e canFam3.chr33 29072818 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I a score=535277.000000 s hg38.chr3_KI270935v1_alt 130183 231 + 197351 aggccggtggataacctgaggtcaggagttcgcgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggcgggtgcctgtaatctcagctattcaggaggctgaaacagaagaatcgcttgaacccgggaagcagaggttgcgacgagccgagatcacgtcactgcactccagcctgggcaacaagagcgaaactccgtc s panTro4.chr3_GL389630_random 93847 231 + 103936 aggccggtggataacctgaggtcgggagttcgcgaccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggaggatgcctgtaatctcagctactcaggaggctgaaacagaagaatcgcttgaacccgggaggcagaggttgcgatgagccgagatcacatcactgcactccagcctgggcaacaagagcgaaactccatc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788148 231 + 202140232 aggctggcggataacctgaggtccggagttcgagaccagcctgaccaacacggtgaaaccctgtctctactaaaaatac-aaaattagtcaggaatggtggcgggtgcctgtaatctcagctactcaggaggctgaagcagaagaatcgcttgaacccgggaggcagaggctgcgatgagccaagatcgcgtcactgcactccagcctgggcaacaagagcgaaactccatc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120876875 231 + 123690457 aggccggcggatcacctgaggttgggagttcgagcccagcctgaccaacatggtgaaaccctgtctctactaaaaatac-aaaattagtcaggcatggtggcgggtgcctgtaatctcagctactcaggaggctgaagcaggagaatcgcttgaacccaggaggcagaggttgtgatgagccgagattgcaccattgcactccagcctgggcaacaagagcgaaactccatc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40113 232 + 111706 aggccggcagatcacctgaggtcgggagttcaagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagtcaggcgtagtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatagcttgaacccgggaggcagaggttgccgtgagccgagatcacgccactgcactccagcctgggcaacaagagtgaaactccatc i rheMac3.chrUn_JH291127 C 0 I 27 s macFas5.chr2 74896 231 + 192460366 aggccggcagatcacctgaggtcgggagttcaagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatgc-aaaattagtcaggcgtagtgacaggcacctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaacccgggaggcagaggttgccgtgagccgagatcacgccattgcactccagcctgggcaacaagagtgaaactccatc i macFas5.chr2 C 0 I 31 s papAnu2.chr2 72288 231 - 187378091 aggccggcagatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatgc-aaaattagtcaggcatggtgatgggcacctgtaatcccagctactcaggaggctgaagcaggagaatcacttgaacccaggaggcagaggttgccgtgagctgagatcatgccactgcactccagcctgggcaacaagagtgaaactccatc i papAnu2.chr2 C 0 I 32 s chlSab2.chr15 423562 227 - 91754291 aggccagcagatcacctgaggtcgggagttcaagaccaggctgaccaacatggtgaaactctgtctctactaaaaatgc-aaaatt----aggcatggtgacgggcacctgtaatcccagctactcaggaggctgaagcaggagaatcgcttgaactcgggaggcagaggttgccgtgagctgagatcatgccactgcactccagcctgggcaacaagagtgaaaccccgtc i chlSab2.chr15 C 0 I 32 e mm10.chr16 65436592 105 - 98207768 I e canFam3.chr33 29072818 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I a score=1241.000000 s hg38.chr3_KI270935v1_alt 130414 12 + 197351 Aa--------------------------------cacacacaca s panTro4.chr3_GL389630_random 94078 44 + 103936 AAAacacacacacacacacacgcacgcacacacgcacacacaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788379 44 + 202140232 AAAacacacacacacacacacacacacacacacacacacacaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877106 25 + 123690457 aaaaaacaaaaaaaaa-------------------acaaaataa i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 40345 27 + 111706 I e mm10.chr16 65436592 105 - 98207768 I e canFam3.chr33 29072818 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 423789 32 - 91754291 I e macFas5.chr2 75127 31 + 192460366 I e papAnu2.chr2 72519 32 - 187378091 I a score=-623.000000 s hg38.chr3_KI270935v1_alt 130426 3 + 197351 -cac s panTro4.chr3_GL389630_random 94122 3 + 103936 -cac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788423 3 + 202140232 -cac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877131 3 + 123690457 -aac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40372 3 + 111706 aaa- i rheMac3.chrUn_JH291127 I 27 C 0 e mm10.chr16 65436592 105 - 98207768 I e canFam3.chr33 29072818 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 423789 32 - 91754291 I e macFas5.chr2 75127 31 + 192460366 I e papAnu2.chr2 72519 32 - 187378091 I a score=22292.000000 s hg38.chr3_KI270935v1_alt 130429 14 + 197351 acgcacaAAACCTG s panTro4.chr3_GL389630_random 94125 14 + 103936 atgcacaAAACCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788426 14 + 202140232 acacacaAAACCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877134 14 + 123690457 aaaaccaaaacatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40375 14 + 111706 acgaaaaaaacctg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 75158 14 + 192460366 acgaaaaaaacctg i macFas5.chr2 I 31 C 0 s papAnu2.chr2 72551 14 - 187378091 aagaaaaaaacctg i papAnu2.chr2 I 32 C 0 s chlSab2.chr15 423821 14 - 91754291 aagaaaAAAAcctg i chlSab2.chr15 I 32 C 0 s mm10.chr16 65436697 14 - 98207768 aagctgaaacccat i mm10.chr16 I 105 C 0 e canFam3.chr33 29072818 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I a score=1486859.000000 s hg38.chr3_KI270935v1_alt 130443 561 + 197351 GAgggtcacatctaaagggacattgcatttgtccagaaatagagagggagtgaaacctcttcacgggtctgtttctcggagccctgccatttccatttcatagtTGCTTCACACATTCATTCAGtcagtcatttaacaaacatttattgagc------taagtggctggcactgttctgggtggtgaggatacagtcatgaatgaataatt-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggcaaacatgaagtgtgggtgaatgtgacattttagacagggcggccaagagaggcctcaccaaggaggggacattg---gaatgaagacgtaaagaaggtgaggggcaagcgtgtggctgtccagggaagg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgca----cctagcgtgtttgaagaacacagaggagcctgcggggctggagtgcagggagctgggaaggggtccagcgctag-gaTGGAGTGGAGGGGGCTGGGAAGG s panTro4.chr3_GL389630_random 94139 561 + 103936 GAgggtcacatctaaacggacattgcttttgtccagaaatagagagggagtgaaacctcttcacgggtctgtttctcggagccctgccatttccatttcatagtTGCTTCACGCATTCATTCAGtcagtcatttaacaaacatttattgagc------taagtggctggcactgttctgggtggtgaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggcaaacacgaagtgtgggtgaatgtgacattttagacagggcggccaagagaggcctcactgaggaggggacattg---gaatgaagacataaaggaggagaggggcaagcgtgtggctgtccagcgaagg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgca----cctagcgtgtttgaagaacacagaggagcctgcggggctggagtgcagggagctgggaaggcgtccagcgctag-gaTGGAGTGGAGGGGGCTGGGAAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199788440 561 + 202140232 GAgggtcacatctaaacggacattacatttgtccagaaatagagagggagtgaaacctcttcacgggtctgtttctcggagccctgccatttccatttcatagtTGCTTCACGCATTCGTTCAGtcagtcatttaacaaatatttattgagc------taagtggctggcactgttctgggtggtgaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatagg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagagaaggcaaacacgaagtgtgggtgaatgtgacattttagacagggcggccaagagaggcttcgccgaggagggttcattg---gaatgaagacgtaaaggaggtgaggggcaagcgtgtggctgtccggggaagg-aagggtattccaggcaagagaacagcatgtgtgaagcctgg-gagctgagcaca----cctggcgtgtttgaagaacacagaggagcctgcggggctggagtggagggggctgggaagTCGTCCAGCACTAG-GATTGAGTGGAGGGGGCTGGGAAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877148 557 + 123690457 gaggatcacatctaaacggatattgcatttgtccagaaatagagagggagtgaaacctctccacgggtctgtttctcggagccctgccatttccatttcatagtTGCGTCACGCATTCATTCAGtcagtcatttaacaaatatttattgagc------taagtggctggcactgttctgggtgatgaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaa----aaggcagggaaggcaaacaggaagtgtgggtgaatgtgacattttggacagggtggccaagaaaggcattgccaaggaggggacattg---gaatgaagacataaaggaggtgaggggcaagcgtgtggctgtccagggaatg-aagggtattccaggcaagagaacagcacgtgtgaagcctgg-gagctgagcaca----cctggtgtgtctgaagaacacagaggagcctacagggctggagtgtagggagctgggaaggggTCCAACACCAG-GATGGAGTGCAGGGAGCTGGGAAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40389 564 + 111706 gagagtcacatcgaaacgcacatcacatttgtccagaaatagagagggagtgaaaccttttcacggggctgtttctcggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAATCTGtcatttaacaaatatttattgagc------taagtggctggcattgctctgggtagtgaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggcaaacaggaagtgtgggtgaatgtgccattttagacagggcggccaagagagcccttgctgaggagggga-attg---gaataaagacataaaggaggtgaggggcaagcgtgtggctgtccagggaaggaaaaggcattc-aggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttgaggaacacagaggagcctgcggggctggagtggagggaggtgggaaggggtccagcagtag-gatggagtgcagggagctgggaagg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 75172 561 + 192460366 gagagtcacatcgaaacgcacatcacatttgtccagaaatagagagggagtgaaaccttttcacggggctgtttctcggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAATCTGtcatttaacaaatatttattgagc------taagtggctggcattgctctgggtagtgaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaa--atg-------ttgagtaattataaatgctaaggagaaaaaaataaagaaggaaaggcaaacaggaagtgtgggtgaatgtgccattttagacagggcggccaagagagccctcgctgaggagggga-actg---gaataaagacataaaggaggtgaggggcaagcgtgtggctgtccagggaagg-aaaggcattc-aggcaagagaacagcatgtgtgaagcctgg-gagctgagcgcacatgcctggtgtgtttgaggaacacagaggagcctgcggggctggagtggagggaggtgggaaggcgtccagcagtag-gatggagtgcagggagctgggaagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 72565 564 - 187378091 gaGGGTCACATCGAAACGCACATCACATTTGtccagaaagagagagggagtgaAACCTTTTCACAGGTCTGTTTCTCGGAGCCCTGCCATTTCCATTTCATAGTTGGTTCACACATCCATTCAATctgtcatttaacaaatatttattgagc------taaGTGGCTGGCATTGCTCTGGGTAGTGAGGATACAGtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgaGTAATTATAaatgctaaggagaaaaaaataaagcagggaaggcAAACAGGAAGTGTGGGTGAATGTGCCATTTTAGACAGGGCGGCCAAGAGAGCCCTCGCTGAGGAGGGGACATTG---GAATAAAGACATAAAGAAGGTGAGGGGCAAGTATGTGGCTGTCCAGGGAAGG-AAAGGCATTC-AGGCAAGAGAACAGCACGTGTGAAGCCTGG-GAGCTGAGCGCACATGCCTGGTGTGTTTGGGGAACACAGAGGACCCTGCggggctggagtggagggaggtgggaaggggtccagcagtag-gatggagtggagggaggtgggaagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 423835 565 - 91754291 gagggtcacatctaaacggacatcacatttgtccagaaatagagagggagtgaaaccttttcactggtctgtttcttggagccctgccatttccatttcatAGTTGGTTCACACATCCATTCAGtcagtcatttaacaaatatttattgagc------taagtggctggcattgctctgggtagtaaggatacagtcatgaatgaataata-aaaaagatacctgtgaaaattataaaatatg-------ttgagtaattataaatgctaaggagaaaaaaataaagcagggaaggcaaacaggaagtgtgggtgaatgtgccattttagacagggcagcccagagagccctcactgaggaggggacattg---gaataaagacataaaggaggtgaggggcaagcgtgttgctgtccagggaagg-aaaggcattctaggcaagagaacagcacgtgtgaagcctgg-gagctgagcgcgcatgcctggtgtgtttgaggaacacagaggagcctgccgggctagagtggagggagctgggaaggggtCCAGCACTAG-GATGGAGTGGAGGGAGCTGGGAAAG i chlSab2.chr15 C 0 C 0 s mm10.chr16 65436711 457 - 98207768 gagtgtggtatgtagatggacattccatcttcccagaaagagag-----gtcaagctctctcaaagctccgtatcttggaagcctattatttccatcccattgcatattaaTAAGTTTCATCAAT--------------AGATGTATTGAGCATGTGATATACAGATGGCCCTAATCT-----------CTATAGCAATGAACAAGTGATAGAAAAAGAGGCTTAAGGGAATTATAAATTATAAGATGCTCTTACTAGTTAGAAATGCTA-----AAAAAAAAAAATCAGGAAAG--------GGGGTGTGAATAAACGTGAAATAAAAGACATGGCAGTCTGGGG-------GCTTAAGAAGGCA-------------------------------GTGACCTGCCTGTGGCTGGCTGTGGAGAG-AG-------CCTTGTAAGAGAAAGGCACATGCAGAGTT--------------------TCCAGTGAGCCCAAAGAAGCCAG---------------TGGAGTGGAGGGAGGGGAGGAGAAG----GGGGTAGTGGCAGAGTGCATAGGGCAGTGAAGG i mm10.chr16 C 0 I 35 s canFam3.chr33 29072818 514 + 31377067 gagggtgatctccagatgggcattgcatttgccaggaaatagag-------gAA-------CACGG----------TGGA--CATGCAATTTCCATTTCCCTGTT--------CAGTCATTCGGtcagtcgctgaac--acacgcactgagcgcctaccgtatggctggtagggctctaggtagtgaggacacagcagtaaac-agtactg-agaaggatacctatggaaactaggaaatatg-------ctagatagttataaatgctgaggagaaaaaaacaaagcagggacggcaaataggaagtatgggtaaatgtgagat-ttgggcaggccggccaagaagggcattgcggaggaggcgactctgcttgcacgcagccttggaggaggagag-ggtgagcctggggctgcctgg---agg-aagggtgtc--agggcagagagggccatggatggagcctggagtgaggagcgag----cccgctgtggttggtgaacacggagaagccaggagggctggagtggagggagcagggcaggga------------gaaggagagg-gagagttggagag- i canFam3.chr33 C 0 C 0 e calJac3.chr17 941647 452 - 74750902 I a score=33653.000000 s hg38.chr3_KI270935v1_alt 131004 15 + 197351 CATCCAGCGCTAGGA s panTro4.chr3_GL389630_random 94700 15 + 103936 CGTCCAGCACTAGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789001 15 + 202140232 GGTCCAGCACTAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877705 15 + 123690457 GGTCCAGCACTAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 40953 15 + 111706 ggtccagCACTAGGA i rheMac3.chrUn_JH291127 C 0 I 48 s macFas5.chr2 75733 15 + 192460366 ggtcCAGCACTAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73129 15 - 187378091 ggtCCAGCACTAGGA i papAnu2.chr2 C 0 I 135 s chlSab2.chr15 424400 15 - 91754291 GGTCCAGCACTAGGA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29073332 14 + 31377067 cttctggggTCAGG- i canFam3.chr33 C 0 C 0 e mm10.chr16 65437168 35 - 98207768 I e calJac3.chr17 941647 452 - 74750902 I a score=3820.000000 s hg38.chr3_KI270935v1_alt 131019 4 + 197351 TGGA s panTro4.chr3_GL389630_random 94715 4 + 103936 TGGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789016 4 + 202140232 TGGA i ponAbe2.chr3 C 0 I 1 s nomLeu3.chr11 120877720 4 + 123690457 TGGA i nomLeu3.chr11 C 0 I 1 s chlSab2.chr15 424415 4 - 91754291 TGGA i chlSab2.chr15 C 0 I 1 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e canFam3.chr33 29073346 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e macFas5.chr2 75748 0 + 192460366 C e papAnu2.chr2 73144 135 - 187378091 I a score=3054.000000 s hg38.chr3_KI270935v1_alt 131023 5 + 197351 TGGAG s panTro4.chr3_GL389630_random 94719 5 + 103936 TGGAG i panTro4.chr3_GL389630_random C 0 I 300 s ponAbe2.chr3 199789021 5 + 202140232 TGGAG i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 120877725 5 + 123690457 TGCAG i nomLeu3.chr11 I 1 C 0 s macFas5.chr2 75748 4 + 192460366 -GAAG i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e canFam3.chr33 29073346 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 424419 1 - 91754291 I e papAnu2.chr2 73144 135 - 187378091 I a score=10388.000000 s hg38.chr3_KI270935v1_alt 131028 23 + 197351 GGGGCTGGGAAGGGGTCCAGCGC s panTro4.chr3_GL389630_random 95024 23 + 103936 GGGGCTGGGAAGGCGTCCAGCGC i panTro4.chr3_GL389630_random I 300 C 0 s ponAbe2.chr3 199789026 23 + 202140232 GGGGCTGGGAAGGGGTCCAGCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877730 23 + 123690457 GGAGCTGGGAAGGGGTCCAGCAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 75752 11 + 192460366 AGCTCTGAGAA------------ i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e canFam3.chr33 29073346 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 424419 1 - 91754291 I e papAnu2.chr2 73144 135 - 187378091 I a score=15511.000000 s hg38.chr3_KI270935v1_alt 131051 47 + 197351 TAGGATGGAGTGGAGGGG-------------------------------------------GCTGGGAAGGCGTCCAGCGCTAGTATGGA s panTro4.chr3_GL389630_random 95047 47 + 103936 TAGGATGGAGTGGAGGGA-------------------------------------------GCTGGGAAGGCGTCCAGCGCTAGGATGGA i panTro4.chr3_GL389630_random C 0 I 421 s ponAbe2.chr3 199789049 47 + 202140232 TAGGATGGAGTGCAGGGG-------------------------------------------GCTGGGAAGGCGTCCAGCACTAGGATGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877753 47 + 123690457 TAGGATGGAGTGGAGGGA-------------------------------------------GCTGGGAAGGGGTCCAGCACTAGGATGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 75763 29 + 192460366 ----ATG------------------------------------------------------GCGGGGGGCAGACTGAGCG---GGCTGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73279 87 - 187378091 tAGGATGGAgtggagggaggtgggaagggggtCCAGCACTAGGAGAAGAGCTCTGAGAAATGCGGGGGGCAGACTGAGCG---GGCTAGA i papAnu2.chr2 I 135 C 0 s canFam3.chr33 29073346 20 + 31377067 ---------TTGGAAAGG-------------------------------------------GCTGTGAATGT------------------ i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 424419 1 - 91754291 I a score=4230.000000 s hg38.chr3_KI270935v1_alt 131098 6 + 197351 GTGAAG s ponAbe2.chr3 199789096 6 + 202140232 GTGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120877800 6 + 123690457 GTGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 75792 6 + 192460366 GTGCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73366 6 - 187378091 GTGCAG i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e canFam3.chr33 29073366 0 + 31377067 C e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 424419 1 - 91754291 I e panTro4.chr3_GL389630_random 95094 421 + 103936 I a score=15176.000000 s hg38.chr3_KI270935v1_alt 131104 32 + 197351 GGGGCTGGGAAGGCATCCAGCGCTAGGATGGA s panTro4.chr3_GL389630_random 95515 32 + 103936 GGGGCTGGGAAGGCGTCCAGCGCTAGGATGGA i panTro4.chr3_GL389630_random I 421 C 0 s ponAbe2.chr3 199789102 32 + 202140232 GGGGCTGGGAAGGCGTCCAGCACTAGGATGGA i ponAbe2.chr3 C 0 I 267 s nomLeu3.chr11 120877806 32 + 123690457 GGGGCTGGGAAGGGGTCCAGCACTAGGATGGA i nomLeu3.chr11 C 0 I 1408 s macFas5.chr2 75798 4 + 192460366 GGAG---------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73372 32 - 187378091 GGAGCTGGGAAGGGGTCCAGCACTAGGAGAAG i papAnu2.chr2 C 0 C 0 s canFam3.chr33 29073366 5 + 31377067 -----------------CATCA---------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e calJac3.chr17 941647 452 - 74750902 I e chlSab2.chr15 424419 1 - 91754291 I a score=398.000000 s hg38.chr3_KI270935v1_alt 131136 1 + 197351 C s panTro4.chr3_GL389630_random 95547 1 + 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789401 1 + 202140232 T i ponAbe2.chr3 I 267 C 0 s nomLeu3.chr11 120879246 1 + 123690457 T i nomLeu3.chr11 I 1408 C 0 s chlSab2.chr15 424420 1 - 91754291 T i chlSab2.chr15 I 1 C 0 s canFam3.chr33 29073371 1 + 31377067 C i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e calJac3.chr17 941647 452 - 74750902 I e macFas5.chr2 75802 0 + 192460366 C e papAnu2.chr2 73404 0 - 187378091 C a score=4019.000000 s hg38.chr3_KI270935v1_alt 131137 2 + 197351 GG s panTro4.chr3_GL389630_random 95548 2 + 103936 GG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789402 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120879247 2 + 123690457 GG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 73404 2 - 187378091 AG i papAnu2.chr2 C 0 I 47 s chlSab2.chr15 424421 2 - 91754291 GG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942099 2 - 74750902 gg i calJac3.chr17 I 452 C 0 s canFam3.chr33 29073372 2 + 31377067 AG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 40968 48 + 111706 I e mm10.chr16 65437168 35 - 98207768 I e macFas5.chr2 75802 0 + 192460366 C a score=3276.000000 s hg38.chr3_KI270935v1_alt 131139 1 + 197351 A s panTro4.chr3_GL389630_random 95550 1 + 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789404 1 + 202140232 A i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120879249 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41016 1 + 111706 A i rheMac3.chrUn_JH291127 I 48 C 0 s papAnu2.chr2 73453 1 - 187378091 a i papAnu2.chr2 I 47 C 0 s chlSab2.chr15 424423 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942101 1 - 74750902 a i calJac3.chr17 C 0 C 0 s canFam3.chr33 29073374 1 + 31377067 A i canFam3.chr33 C 0 C 0 e mm10.chr16 65437168 35 - 98207768 I e macFas5.chr2 75802 0 + 192460366 C a score=19642.000000 s hg38.chr3_KI270935v1_alt 131140 7 + 197351 GGGGGCT s panTro4.chr3_GL389630_random 95551 7 + 103936 GGGGGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789405 7 + 202140232 GGAGGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120879250 7 + 123690457 GGGGGCT i nomLeu3.chr11 C 0 I 6469 s rheMac3.chrUn_JH291127 41017 7 + 111706 GGGAGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 75802 2 + 192460366 -----CT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73454 7 - 187378091 gggaggt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 424424 7 - 91754291 GGGAGCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942102 7 - 74750902 gggagca i calJac3.chr17 C 0 C 0 s mm10.chr16 65437203 7 - 98207768 GGGAGCT i mm10.chr16 I 35 C 0 s canFam3.chr33 29073375 7 + 31377067 GTGAGCC i canFam3.chr33 C 0 C 0 a score=2091137.000000 s hg38.chr3_KI270935v1_alt 131147 691 + 197351 GGGAAGGCGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CTGAACTGGGCCGAAGGCCACTGCAAGGATGGAGAGAGCCAGGGAAGTCTCTGAAGGGTTTGAGCAGAGGAATGCCAGGAGTGGAAGAATCTGCTCAGTGAATGCAGATGCACAGGGAAAAGCAGGGTCAGGCAAGGGCAGCTCCTCATCTGCT-CCCGA-CTCTGAAAAGGCCTCCCCAG---GC----CTCGGGCCACTTACTGAGGGTGGCGTTCGCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTATCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGCGG---TG------GTACCAGGCATGGCACTCAGCCTTATTCCATCTGTGTCCACCTCTACCCCTCACTTTAGATGGCTTGGAGCG-----GG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACTCCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGGGCTGGTGGTG s panTro4.chr3_GL389630_random 95558 691 + 103936 GGGAAGGCGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CTGAACTGGGCCGAAGGCCACTGCAAGGATGGAGAGAGCCAGGAAAGTCTCTGAAGGGTTTGAGCAGAGGAATGCCAGGAGTGGAAGAATCTGCTCCGTGAATGCAGGTGCACAGGGAAAAGCAGGGTCAGGCAAGGGCAACTCCTCATCTGCT-CCCGA-CTCTGAAAAGGCCTTCCCGG---GC----CTCGGGCCACTTACTGAGGGTGGCGTTCGCCTGCTCGTAGTTTTTACTGACTTCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCGTCACA-GTTGGAGATCAAATGTTCAGCCCAGGAGCTGTTTTTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCATTGATCTGCCCTGTAACACACAGAGCGTGG---TG------GTACCAGGCATGGCACTCAACCTTATTCCATCTGTGTCCACCTCTACCCCTCACTTTATATGGCTTGGAGCA-----GG-GTGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTAGAAACACCTGCTGCAGTGAGAGAGGACACTCCACGTCCCCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGGGCTGGTGGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199789412 691 + 202140232 GGGAAGGCGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CTGAACTGGGCCGAAGGCCACTGCAAGGATGGAGAGAGCCGGGAAAGTCACTGAAGGGTTTGGGCAGAGGAATAACAGGAGCGAAAGAATCTGCTCAGTGAAAGCAGATGCACAGGGAAAAGCAGGGCCAGGCAAGGGCAGCTCCTCATCTGCT-CCCGA-CTCTGAAAAGGCCCCCCGGG---GC----CTCGGGCCACTTACTGAGGGTGGCGTTCACCTGCTCGTATTTTTTACTGACTTCCCTCGTGTGACGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCTGTCACA-GCTGGAGATCAAATCTTCAGCCCAGGAGCTGTTTTTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGCGA---TG------GCACCAGGCATGGCACTCAGCCTTATTCCATTTGTGTCCACCTCTACCCCTCACTTTATATGGCTTGGAGCG-----GG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAGTCTGGAAATGCCTGCTGCAGGGAGAGAGGACACTCCACATCCCCCATTCTCTCCTCCAGGTCGAGAGAGGCAGGTGGGCTGGTGGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120885726 672 + 123690457 GGGAAGGGGTCCAGCACTAGGAGAAGAACTCTGAGAAG-------------CTGAACCAGGCCAAAGGCCACTGCAAGGAT-GAGACAGCCAGGGAAGTCACTGAAGGGTCTGAGCAGAGGAATAACAGGAGTGGAAGAATCTGCTCAGTGAATGCAGATATACAGGGTAAAGCAGAGTCAGGCAAGGGCAGCTCCTCATCTGCT-CCCAA-GTCTGAAAAGCCCTCCCGGG---GC----CTCGGGCCACTTACTGATGGTGGCATTCACCTGCTCGTAGGTTTTACTGACTGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGAGTGTCATAGATGCATGAGCTGTCTCCGTCAC-------AGATCAAAGCTTCAGCCCAGGAGCTGTTTTTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTATTGCCAAGGAGGCCTGTGCCGTTGATCTGCCCTGTAACACACAGAGCACGA---TG------GTACCAGGCGTGGCACTCAGCCTTATTCCACCTGTGTCCGCCTCTACCCCTCACTTTATATGGCTTGGGGTG-----GG-GCGG--TGGGAGT--GCAGGGCCAGAGCGGTTTCCAGCTTCTGAG----------CCTGCTGCAGTGAGAGAGGACACTCCACGTCCTCCATTCTCTCCTCCAGGTAGAGAGAGGCAGGTGGGCTGGTG--G i nomLeu3.chr11 I 6469 C 0 s rheMac3.chrUn_JH291127 41024 687 + 111706 GGGAAGGGGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CCGAACTGGGCCAAAGGCCCCTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGGTCTGAGCAGAGGAATAACAGGAGCAAAAGAATCTGTTCAGTGAATGCAGATGCACAGGGTAAAGCAGGGTCAGGGAAGGGCAGCTCCTCATCTGCT-TCTG--CTCTGAAAAGGCCTCCCAGG---GG----CTCGGGCCACTTACTGAGGGTGGCGTTCACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTGTGAAGTCCGATGCTTGTGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGTGA---TG------GTACCGGGCATGGCACTCAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCCTGGAGCG-----GG-GCGG--TGGGAGT--GCAGGGCAACAGCGGTTACTAGCTTCTGAGTCTGGAAACGCCTGCTGCGGTGAGAGAGGACGCTCGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGCACTGGTCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 75804 687 + 192460366 GGGAAGGGGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CTGAACCGGGCCAAAGGCCCCTGCTAGGATGGAGAGAGCGGgggaagccactggagggtctgagcagaggaataacaggaGCAAAAGAATCTGTTCAGTGAATGCAGATGCACAGGGTAAAGCAGGGTCAGGGAAGGGCAGCTCCTCATCTGCT-TCTT--CTCTGAAAAGGCCTCCCAGG---GG----CTTGGGCCACTTACTGAGGGTGGCATTCACCTGCTTGTAGGTTTTGCTGATGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCACATCTTCAGCCCAGGAGCTG---TTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGAAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGTGA---TG------GTACCGGGCATGGCACTCAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCCTGGAGCA-----GG-GCGG--TGGGAGT--GCAGGGCGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGAGAGAGGACGCTCGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGCACTGGTCCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 73461 688 - 187378091 gggaaggggtCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CCGAACCGGGCCAAAGGCCACTGCTAAGATGGAGACAGCGggggaagccactggagggtcTGAGCAGAGGAATAACAGGAGCAAAAGAATCTGTTCAGTGAATGCAGATGCACAGGGTGAAGCAGGGTCAGGGAAGGGCAGCTCCTCATCTGCT-TCTGA-CTCTGAAAAGGCCTCCCCGG---GG----CTCGGGCCACTTACTGAGGGTGGCGTTCACCTGCTTGTAGGTTTTGCTGACAGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCATATCTTCAGCCCAGGAGCTG---TTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGTGA---TG------GTACCGGGCATGGCACTCAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCCTGGAGCG-----GG-GCGG--TGGGAGT--GCAGGGTGACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGTCTGCTGCGGTGAGAGAGGACGCTCGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGCACTGGTCCTg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 424431 689 - 91754291 GGGAAGGGGTCCAGCACTAGGAGAAGAGCTCTGAGAAG-------------CTGAACCAGGCCAAAGGCCACTGCTAGGATGGAGAGAGCGGGGGAAGCCACTGGAGGGTCTGAGCAGAGGAATAACAGGAGCAAAAGAATCTCTTCAGTGAATGCAGATGCACAGGGTAAAGCAGGGTCAGGGAAGGGCAGCTCCTCATCTGCT-TCTG--CTCTGAAAAGGCCTCCCGGG---GG----CTCAGGCCACTTACTGAGGGTGGCGTTCACCTGCTTGTAGGTTTTGCTGACGGCCCTCGTGTGAAGTCCGATGCTTGCGTTGCGCAGGGCCAGGGTGTCATAGATGCATGAGCTGTCTCCATTACA-GCTGGAGATCAAATCTTCAGCCCATGAGCTGTTTTTTTGCAGTTGTGAGTAGAAAACAGGGGTGAAGTTGGAAGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTGCCCTGTAACACACAGAGCGTGA---TG------GTACCGGGCATGGCACTCAGCCTTATTCCTTCTGTGTCCACCCCTACCCCTCACTTTATGTGGCTTGGAGCA------G-GCCG--TGGGAGT--GCAGGGCCACAGCGGTTTCTAGCTTCTGAGTCTGGAAACGCCTGCTGCAGTGACAGAGGACACTCGACCTACCCCATTCTCTCCTCCAGCTAGAGAAAGGCAGGTGCGCTGGTCCTG i chlSab2.chr15 C 0 I 9 s calJac3.chr17 942109 668 - 74750902 gggagcgggtatagcat---gagaagacctctaagaagcggcgggaccagactgaac-aggcctaaggccacggtaaggatggagagagcc-gggaagtcagtggaggatttgagcagagg--------------aagaatctgctccgTGAATGCAGTTGCGCAGGGTCCAGCAGGGTCACGGAA-GGCTGCTCCTCA-CAGCT-CCCAG-CTCTGAAAAGGCCTCCTGGG---GC----GTTGGGCCACTTACTGAAGGTGGCGTTCACCCGCTCGTAG-TTTTATGGAGCGCCAGCGTGTGATGTCCAATGCTTGTGTTGCGCGTGGCCAGGGCGTCATAGATGCAGGATCTATCTCCGTTGCAGGCTGGAGATCAAATCTTGATCCGAGGAGCTGTTTGTTCGCAGTTGGTCATAGAAAACAGGGGTGAAGTTGGAGGGCAGCTGGTCATTCCTCTTGCCAAGGAGGCCTGTCCCGTTGATCTCCCCTGTAACACACAGGGCTCTA---TGGTCGT-GTATCAGGTGT-GCACTCAGCCTCATGTTGTCTGTGTCCACCCCTACCCCTCACTTT------------GGG-----GG-GCTG--TGGGAGT--GCAGAGCCAGAGCAGTTTCCAGCT--TGAGTCTGGAAACGCATGCTGCAATG--AGAGGACCCTCCACCCCGCCC-TTCTCTCCTCCAGGTAGAGATA--CAGGTGGGATGGCAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65437210 572 - 98207768 --------------------GGGAGGA------------------------TTTGAC-----------CCACTAAAGGAATAAAGA----------------CGTGGAGCTTGAG----GGAATGCCATGAATGGGGG-------------------------------------------------------TCCTTGCCTGCT-CCCCATCTCTGGAAAGGTCTCCCCGACCTTC----CTCGTGTCACTTACTGAGGGTGTCATTCATATGTTGGAACTCATTAAGGATGGAATTGGTGCTTTGTCCAATAGTTCTGTTTCCCGTGGCCAGGATGTCAAACATGCACTTTCTGTCGCCTTTGCA-CCCAGAGGCCAAGTCTTCACCTGAGGCACTCTGATTCAACAGTTGAGACAGAAAGATGGGGGTGAACTTGGTAGGCAGCGGGTCTGCCCTTATCCCAAGGAGGCCTGTTCCGTTGACGTGCCCTGTAACACAGGAGGTACGAGGGTG------GTATAAGACAC------CAGTCATATTTCACTTGTGCCCACCCCTAGCTCT--CTGTATATGGTTTTGTGCGTAAGGGG-GTGGCCTGGGAGCTGGTAGGAACAGGATAATTTC-------AGAGTCTGGAAATCCCTGCTTCAGTGAGTGAAGACCACCCACTCCTTTCCTCCTTTCCT---GGAAGAGACGTGCAGCTAGGGTGGGAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 29073382 594 + 31377067 --------------------------------------------------------------------------------------------TGGGAGTCATGG-------------GAGGAACAACCTGAGCAAAAGAATCTGTTAAATTTTTAAAGGAATATCGTGAAAAGGGTGGGGCGGGAGGGG-GGCTCCTAATCTGCCACCTAA-CTCTGCAAACGTCTCCCCGC---GCGCGACGCACGCCACTTACTGAGGGTGGCGTTCATCCGCTGCTGACTTGCGAAGAGCATCCTGGTGTTCAGGCCCGTGTCTGTGTTTCCTGTGGCCAGGCTGTCATAGATGCACCGCTCATCTTCATGACA-CTTGGAGAGCAGCATTTCATTTAAGGTTTTATTTTTCTGCAGGCTGGTAAGGAAATCGGGGGTGAAGTTGGAAGGCGGATGGTCACCTCTCTCGCCAAGGAGTCCCGTATCATTGGTTTTCCCTGTAAGACACAGGATGCAA---TGGCGGTGGCACCAGGGATGGTCTCCAGC---------------TCTACTCCCTCCCCTCACTTTATGTGCCTGGGGGTG-----AGCGAGG--CAGATGC--GGAGGGCTGGAGTGACTTCTGGCTTCTGAGGCCGGAAATGCCTACTCTGGTCAGTGAGAGC-CACCCCTGCCCTTGTCTCCTCTTCCAGGTAGAGAAGCGCAGATGGGATGGGAGTC i canFam3.chr33 C 0 C 0 a score=39625.000000 s hg38.chr3_KI270935v1_alt 131838 14 + 197351 GTGGGGACAGCCCT s panTro4.chr3_GL389630_random 96249 14 + 103936 GTGGGGACAGCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199790103 14 + 202140232 GGGGGGACAGTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120886398 14 + 123690457 GGGGGGACAGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41711 13 + 111706 -AGGGGACAGTCCT i rheMac3.chrUn_JH291127 C 0 I 10 s macFas5.chr2 76491 13 + 192460366 -GGGGGACAGTCCT i macFas5.chr2 C 0 I 10 s papAnu2.chr2 74149 13 - 187378091 -gggggacagtcct i papAnu2.chr2 C 0 I 10 s calJac3.chr17 942777 14 - 74750902 GAGGGGACAGACCT i calJac3.chr17 C 0 C 0 s mm10.chr16 65437782 12 - 98207768 --GGGGACAGACAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29073976 13 + 31377067 -GGGGGACAAGTCT i canFam3.chr33 C 0 C 0 e chlSab2.chr15 425120 9 - 91754291 I a score=16162.000000 s hg38.chr3_KI270935v1_alt 131852 6 + 197351 GGGGGG-- s panTro4.chr3_GL389630_random 96263 6 + 103936 GGGGGG-- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199790117 6 + 202140232 GAGGGG-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120886412 6 + 123690457 GGGGGG-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41734 6 + 111706 GGGGGG-- i rheMac3.chrUn_JH291127 I 10 C 0 s macFas5.chr2 76514 6 + 192460366 GGGGGG-- i macFas5.chr2 I 10 C 0 s papAnu2.chr2 74172 6 - 187378091 gggggg-- i papAnu2.chr2 I 10 C 0 s chlSab2.chr15 425129 6 - 91754291 GGGGGG-- i chlSab2.chr15 I 9 C 0 s calJac3.chr17 942791 4 - 74750902 --AGGA-- i calJac3.chr17 C 0 I 2 s mm10.chr16 65437794 4 - 98207768 --GGGA-- i mm10.chr16 C 0 I 3 s canFam3.chr33 29073989 6 + 31377067 --GGGACC i canFam3.chr33 C 0 C 0 a score=180335.000000 s hg38.chr3_KI270935v1_alt 131858 73 + 197351 GCA-CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGACGAC-ATAAACATA s panTro4.chr3_GL389630_random 96269 73 + 103936 GCA-CAGATTCCTCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCCACAGGGCCGAGGGGGACGAC-ATAAACATA i panTro4.chr3_GL389630_random C 0 I 2340 s nomLeu3.chr11 120886418 73 + 123690457 GCA-CAGATTCATCAG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCCGAGGGGGACGAC-ATAAACATA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41740 73 + 111706 GCA-CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 76520 73 + 192460366 GCA-CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74178 73 - 187378091 gCA-CAGATTCCTCGG--------------------------ACCTTAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGGGGGACGAC-CTAAACACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 425135 73 - 91754291 GCA-CAGATTCCCCAG--------------------------ACCTCAGGGAGGATG---GAGGTCTGCTTCCTACAGGGCTGAGCGGGACGAC-CTAAACACA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942797 70 - 74750902 GCA-TAGATTCCTCAG--------------------------ACCTTACGAAGGAT------GGTCTGCTTCCTACAGGCCCGAGGGAGACGAC-ATAAACATA i calJac3.chr17 I 2 I 15 s mm10.chr16 65437801 64 - 98207768 TGG-CAAGGTCTTCAG--------------------------ACCTTCCCAAGGATGCATAAGA------TCCTACAAGCATAAGGGAGACAAC-ACA------ i mm10.chr16 I 3 C 0 s canFam3.chr33 29073995 100 + 31377067 GCACCAGAATCCTCAGCACTTCCTCCTGGCCTTTCCACTCCTCCCTCACAAAGGATG---GAGGTCCGG-TCCCACAGGCCTGAGGGACACGACGCTTTCCATC i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199790123 0 + 202140232 C a score=66298.000000 s hg38.chr3_KI270935v1_alt 131931 37 + 197351 CCGGCTCCC---CTCACCTGCCCC-TCTGCCCCAGGACCCT s nomLeu3.chr11 120886491 37 + 123690457 CCGGCTCCC---CTCACCTGCCCC-TCTGCCCCAGGACCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41813 38 + 111706 CTGGCTCTC---CTTACCTGCCCCTTCTGCCCCGAGACCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 76593 38 + 192460366 CTGGCTCTC---CTTACCTGCCCCTTCTGCCCCGAGACCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74251 38 - 187378091 CTGGCTCTC---CTTACCTGCCCCTTCTGCCCCAAGACCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 425208 38 - 91754291 CTGGCTCTC---CTTACCTGCGCCTTCTGCCCCAAGACCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942882 38 - 74750902 CTGGCCTGC---CCCATCTGCCCTATCTGCCCCAGGACTCT i calJac3.chr17 I 15 C 0 s mm10.chr16 65437865 40 - 98207768 GCAGCTCCCTCACTGACCTGCCCCAGTGGCCTGAGGACCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 29074095 38 + 31377067 CCGCCCAGC---CGCACCTGCCCCGAGGACCCTCAAGCCCT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199790123 0 + 202140232 C e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=57616.000000 s hg38.chr3_KI270935v1_alt 131968 16 + 197351 GCCCAGACTCACAGGT s ponAbe2.chr3 199790123 16 + 202140232 GCCCAGACTCACAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120886528 16 + 123690457 GCCCAGACTCACAGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41851 16 + 111706 GCCCAGACTCACAGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 76631 16 + 192460366 GCCCAGACTCACAGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74289 16 - 187378091 GCCCAGACTCACACGt i papAnu2.chr2 C 0 I 365 s chlSab2.chr15 425246 16 - 91754291 GCCCAGACTCACAGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942920 16 - 74750902 GCCCAGACTCACAGGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65437905 14 - 98207768 --CCAGACTCACATGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29074133 14 + 31377067 --CCTCACTCACAGGT i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=889268.000000 s hg38.chr3_KI270935v1_alt 131984 474 + 197351 CATTCCAAAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCTGGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGGCACGCGGCTGTCCCCTTCCTGGGGAGCATCCGGCGGACGCAGTGGGGAGAGGCCAGGGCCTGGCAGCCTCTGCT-CTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGGAGGA-CGGGCCCTCACACCCTGCCCGTCTGCCTTCGGGAGGGGCGGG-AGGAAACGCGGGCAGCGGTGGAGGAGGGC-GGGAGGA-------------------------------TGTGGGAGGCAAGAGGAAAGGGAGAAAG-GATGGCTGTGC------CCCCCGCCTCCCCGCAGCCC-CCCCTGATGCTCCCTTAGAGCGGGCGGAGGACAGGAAGGGAGCCTCGGGGGAGGCTGGAGAAGCCCCTCGGCTCCCGGCCCGCTCTGTGCCC s ponAbe2.chr3 199790139 476 + 202140232 CATTCCATAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACCCTGGGCACGCGGCTGTCCCCTTCCTGGGGAGCATCCGGCGGACGCAGTGGGGAGAAGCCAGGGCCTGGCAGCCTCTGCT-CTTGCA--CCTGCTGTCCGGCC------TCCAGGGGAGCTGGGAGGA-CGGGCCCTCACACCCTGCCCGTCTGCCTTCGGGAGGGGGAGGCAGGAAACGCGGGCAGCGATGGAGGAGGGC-GGGAGGG-------------------------------TGTGGGAGGCAAGAGGAAAGGGAGAAAG-GATGGCTGTGC------CCCCCGCCTCCCCGGAGCCCACCCCTGATGCTCCCTTAGAGCGGGAGGAGGACAGGAAGGGAGCCTCGGGGGAGGCTGGAGAAGCCCCTCCGCTCCCGGCCTGCTCTGTGCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120886544 475 + 123690457 CATTCCATAGTGGAAAAGCATCTCCTCAGGGCTCCCTGGGGGGATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGAGCCCTGAAGGA----CAGAGTGGGAGGTTGGCCACCCTGGGCACACGGCTGTCCCCTTCCTGGGGAGCATCCGGAGGACGCAGTGGGGAGAGGCCAGGGCCTGGCAGCCTCTGCT-CCTGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGGAGGA-CGGGCCCTCACACCCTGCCCGTCTGCCTTCgggaggggcggg-aggaaacgcaggcagcgatggaggagggc-gggagga-------------------------------tgtgggaggcaagaggaaagggagAAAG-GATGGCTGTGC------CCCCCGCCTCCCCGGAGCCCATCCCTGATGCTCCCTTAGAGCGGGAGGAGGACAGGAAGGGAGCCTCGGGGGAGGCTGGAGAAGCCCCTCGGCTCCCGGCCCGCTCTGTGCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 41867 483 + 111706 CATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGGCACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGAACGCAGTGGGGAGAGGCCAGGGCCTGGCAGCCTCTGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGGAGGA-CGGGCCCTCACACCCTGCCCAGCTGCCTCCCGGAGGGGTGGG-AGG-AACGCGGGCAGCCGTGGAAGAGGGC-GGGAGGA-------------------------------TGTGGGAGGCAAGAGGAAAGGGCCAAAG-GATGGCTGTGACC-CCGCCCCCGACTCTCCGGAGCCCACCCCTGATGCTCCCTTAGAGCGGGAGGTGGCCAGAAAGGGTGCCTCGGTGGCGGCTGGAGAAGCCCCTCCGCTCCCGGCCCGCTCCGTGCCC i rheMac3.chrUn_JH291127 C 0 M 489 s macFas5.chr2 76647 483 + 192460366 CATTCCGTAGTGGAAAAGCGTCTCCTCAGAGCTCCCTGGGGGGACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGGCACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGAACGCCCTGGGGAGAGGCCAGGGCCTGGCAGCCTCTGCC-GTCGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGGAGGA-CGGGCCCTCACACCCTGCCCGGCTGCCTTCAGGAGGGGTGGG-AGGAAACTCGGGCAGCCATGGAGGAGGGA-GGGAGGA-------------------------------TGTGGGAGGCAAGAGGAAAGGGCCAAAG-GATGGCTGTGACC-CCGCCCCCGACTCTCCGGGGCCCACCCCTGATGCTCCCTTAGAGCGGGAGGTGGCCAGAAAGGGTGCCTCGGTGGCGGCTGGAGAAGCCCCTCCGCTCCCGGCCCGCTCCGTGCC- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 425262 482 - 91754291 CATTCCGTAGTGGAAAAGCGTCTCCTCGGAGCTCCCTGGGGGAACGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGACTCCTGAGGGACAGTCAGAGTGGGAGGTTGGCCACCCTGGGCACACAGCTGTCCCCTTCCTGGGGAGCATCCAGTGAACACAGT-GGGAGAGGCCAGGGCCTGGCAGCCTCTGTC-GTGGCA--CCTGCTGTCAGGCC------TCCAGGGGAGCCGGGAGGA-CGGGCCCTCACAGCCTGCGCGGCTGCCTCCGGGAGGGGTGGG-AGG-AACGCGGGCAGCCATGGAGGAGGGC-GGGAGGA-------------------------------TGTGGGAGGCCAGAGGAAAGGGCCAAAG-GATGGCTGCGACC-CCGCCCCCGACTCCCCGGAGCCCGCCCCTGATGCTCCCTTAGAGCGGGAGGTGACCAGAAAGGGTGCCTCGGTGGCGGCTGGAGAAGCCCCTCCGCTCCCGGCCCGCTCCGTGCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 942936 478 - 74750902 CATTCCATAGTGGAAAAGCGTGGCCTCAGAGCTACTTGGGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCGTCCTCCGGATTGTTATTCCAGATCCCTGAGGGA----CAGAGTGGGAGGTTGGCCACGCTGGGCATTCGGCTGTCCCCTTCCCCTCGAGCAT-CGGGGGATGCAGGGAGGAGCAGCCAGGACCTGGCAGCCTCTGCC-TTTGCA--CCTGCTGTCAGGCC------TCCAGGGGAACCCGGAGGACCGGGCCTTCATGCGCTGCCCCTCTG-CTTAGGGAGGGTCGGC-GGGAAACACTGGCAGAGATACAGGAGGACAGGAAGGA-------------------------------TGTGGGAGGCAAGAAGAAA-GGAGGAAG-GACGGCAGCGGCCGCCACCCCCGCCTCCCTGGAGCACACCCCTGATGCTCCCTTAGAGCGGGAGGAGGGCAGGAAGGGAGACTTATCGGAGGCTGGAGAAGTCCCTC--CCCTAGGCCCGCTCCGTGCCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65437919 458 - 98207768 CATTCCATAGTAGAAAAGGGTCTCCTCAGAGCTGTTTGAGGGAATGGTGGAGCCATTGGGCATCCTGAAGTCATCTTCTGGATTGTCATTCCACACTCCTGTGAGA----CAGAGCAGGAGGTTCGATACCACAGGCTCA--------CCTTCTCCCGGGGGCATTCAATGG-------------------------GGCAGCTGCAACT-GTCCCAGGCCTAGGGTCGG--T------TCCAGGAGGTGGGAGAGGACCATGCACTCATACCCTGCCATTGTGCTTTaaaaaagg--aga-agaaagccaagaagaatgtgggggaagat-gggaggaaggaaggagacaagactaaaaacaggaaaagtagggaagggaaggggaggggaggaaggaGAAAGCTGAGC------CGCCACTTTCCCCATAGCATTTCCTTCATATTCCCTTAAAA-AAATGCCAAGCAGGAAATTAGCCTAAACAGTGTGTGAAGCAGCCCCTC--------------TCTGTGCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29074147 355 + 31377067 CATTCCGTAGTGAAAAAGTGAGGCCTCGCTGCTATTGCCGGGAATGCTGGAGCCATTGGGCATCCTGAAGTCGTCTCCTGGATTGCCATTCCAAACTCCTGAGGGA----CAGAACAGGAGGTTGGCCATCCTGGGACTGTGGCTCCCCCC--------GAG-----------------------------------GGAAACCCCTTCCAGTTGCA--TCTGTCCTTGGCCCAGTCCTTCCGGGGGAGGAGAGAGGA-CCGTACCTCATAGCCCACCC-TCTGTCCCggggatgaa-gag-gggaaatggaggcgggggtggaggaagaa-gggg----------------------------------cgcgggagg--------------------gagggC-------------------TTCCCAGAGCCCATCCTCCAAGCCCCCCTG--------GCTGCCCTGAACCGGAGCTTTAG-----------GAAGC---------------------------- i canFam3.chr33 C 0 C 0 e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=385269.000000 s hg38.chr3_KI270935v1_alt 132458 285 + 197351 CAAGGGTTCTGCTCCAAGGAGGCGGAGAAAGGG--AGGCCGAGCAGGGCTGCCC------GGG---CCGCCGGCGTGG--GGGTCCGAGCTCCGGCTGGCTCCGCGGAGCCTCAGAGGCAGGTCCGAGCCGCCCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGCGGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGAGCGCGATCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCTCAGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGAACGT s ponAbe2.chr3 199790615 284 + 202140232 CGAGGGTTCTGCTCCAAGGAGGTGGAGAAAGGG--AGGCCGAGCAGGGCTGCCC------GGG---CCGCCGGCGTGG--GAGTCCGAGCTCCGGTTGGCTCCGCGGAGCCTCAGAGGCAGGTCCGAGCCGCCCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGCGGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGA-CGCGATCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCACGGAGCCGTTGCGGCCCAGGAGGACTCCCTTTTTAATGGACGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120887019 285 + 123690457 CGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGGG--AGGCCGAGCAGGGCTGCCC------GGG---CCGCGGGCGTGG--GGGTCCGAGCTCCGGCTGGCTCCGAATAGCCCCAGAGGCAGGTCCGAGCCGCCCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGTGGGAGGCTGGCGGAGGCGTGGAGGATGTTGGAGAGCGCGGTCACCGAGACGGTGGCCCAGCCGTCGAAGCTGGCCGAGACCACAGAGCCGTTGCGGCTCAGGAAGACTCCGGTGGCGTTGAACGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 77130 282 + 192460366 CGAGGGTTCTGCTCCAAGGAGGCGGAGAAAGGG--AGGCCGAGCAGGGCTGCCC------GGGC--CCGCGGGCGTGG--GGGTCCGAGCTCC----GGCTCCGTAGAGCCTCAGAGGCAGGTGCGCGCCGCCCTCACCCAGGAGCCCCTCCGTGCGGTTCTGGTACTCGGGCGGGAGGCTGGCGGAGGCGTGGAGGATGTCGGAGAGCGCGATCACCGAGACGGCAGCCCAGCCGTCGAAGCTGGCAGAGACCACGGAGCCGTTGCGGCTCAGGAGGACTCCGGTGGCGTTGACCGT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 425744 277 - 91754291 CGAGGGCTCTGCTCCAAGGAGGCGGAGGAAGGG--AGGCCGAGCA--GCTGCCC------GGGC--CCGCGGGCGTGG--GGGTCCGAGCTCC----GGCTCCGTAGAGCCTCAGAGGCAGGTCCG---CGCCCTCACCCAGGAGCCCCTCCGTGCGGTCCTGGTACTCGGGCGGGAGGCTGGCGGAGGCGTGGAGGATGCCGGAGAGCGCGACCACCGAGACGGCGGCCCAGCCATCGAAGCTGGCAGAGACCACGGAGCCGCTGCGGCTCAGGACGACTCCGGTGGCGTTGACCGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943414 257 - 74750902 CGAGGGTTCTGCTCCGAGGAGGCCGGGAAAGGG--AAGCC-----------TTC------GGG-------------------AATCGACCTCCTGCTG---CCGCAGAGCCACAGAGGCAGGTCTGAGCCGCCCTCACCCAGGAGGCCCTCGGTGAGGTTCCAATACTCCTGCGGGAGGCTGGCGGAGGCGTGGAGGATGCTGGAGAGCGCCGTCACCGAGACCGTGGCAGAGCCGTCGAAGCTGGCCGAGACCTCGTGGCCGCTGTGGCTCAGGAGGACTCCGGGGGCGCTGACCGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65438377 245 - 98207768 ---------------TAGGGGACTGAGGAAGAACTGGGCAGGGCAGGGAAGTCCAAAGGAGGGA--TAGCTGCCTTGGTATAGTCTGAGCTCT------------------------GCA------------TCTTACCCAGAAGGCCCTCTGTGTGGTTTCGATATTCCTCTGATAGGCTGGAGGAGGCATGAAGGATGTTGGAGCGAGCAATCACAGAGATAGTCACTGTCCCATCAAAGTTGGCTGAGACTTGGGAGCCATTTTGGGTCAGCAGAACACCGGTGGTATTGAATAT i mm10.chr16 C 0 I 351 s canFam3.chr33 29074502 229 + 31377067 CAAAGGCTC------------------ACAGGG--AAGCTGAGAGGTCTCGTCC------CCGCCGCCCCGGGCAGGG--TGGTGCCAGCTTC-----------------------------------------TCACCCAGGAGGCCCTCGGTGCGCCCCCGGTACTCCGCGGGGAGGCCGCACGAGGCGTGGAGGATGTTGGACAGGGCCCTCACCGAGACGGCCACCGCCCCGTCGAAGGCGGCCGACACCACGGAGCCCGCGCGGGTCACCGTGACGCCGGTGCTGTTGAATGT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42350 489 + 111706 M e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=49294.000000 s hg38.chr3_KI270935v1_alt 132743 39 + 197351 CTCCTGGCCTGGAGCATCGGGAGGCAGCGGAGAGGAAGC s ponAbe2.chr3 199790899 39 + 202140232 CTCCTGGCCTGGAGCATCCGGAGGCAGCGGAGAGGAAGC i ponAbe2.chr3 C 0 I 907 s nomLeu3.chr11 120887304 39 + 123690457 CTCCTGGCCTGGAGCATCGGGAGGCAGCGGAGAGGAAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 77412 39 + 192460366 CTCCTGGCCTGGAGCATCGGGAGGGCGCGGAGAGGAAGC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426021 39 - 91754291 CTCCTGGCCTGGAGCATCGGGAGGGCGCGGAGAGGAAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943671 38 - 74750902 CTCTGGGCCTGGAATTCCGGGAGGCAGCTGA-AGGACAC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074731 35 + 31377067 CTCCCGGCCTGGA----CGTGGGGAGACAGATGGGGAGC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42350 489 + 111706 M e mm10.chr16 65438622 351 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=12070.000000 s hg38.chr3_KI270935v1_alt 132782 38 + 197351 CAGGTCGGCAccacggcccgcaccaaacccgcgccctg s nomLeu3.chr11 120887343 38 + 123690457 CAGGTCGGCACCGCGGCCCCCACCAAATCCGGGCCCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 77451 38 + 192460366 CAGGTCGGCACCGCGGCCCCCACCGAACCCGCGCCCTG i macFas5.chr2 C 0 M 584 s chlSab2.chr15 426060 38 - 91754291 CAGGTCGGCACCGCGGCCCCCACCGAACCCGCGCCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943709 36 - 74750902 CAGATCCGACACGCAGACC-TGCCAGACACCTTCCAG- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074766 6 + 31377067 ----------CCGGGG---------------------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42350 489 + 111706 M e mm10.chr16 65438622 351 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199790938 907 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=3384.000000 s hg38.chr3_KI270935v1_alt 132820 14 + 197351 ccgggcccgcacca s nomLeu3.chr11 120887381 14 + 123690457 CCCGGCCGGCACCA i nomLeu3.chr11 C 0 I 379 s chlSab2.chr15 426098 14 - 91754291 CCCGGCCCGCACCC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 943745 13 - 74750902 -CCGGGCCACACCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074772 5 + 31377067 CCGGG--------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42350 489 + 111706 M e mm10.chr16 65438622 351 - 98207768 I e macFas5.chr2 77489 584 + 192460366 M e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199790938 907 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=5495.000000 s hg38.chr3_KI270935v1_alt 132834 12 + 197351 cccccaccccgc s ponAbe2.chr3 199791845 12 + 202140232 cccccaccccGC i ponAbe2.chr3 I 907 C 0 s nomLeu3.chr11 120887774 12 + 123690457 CCCCCACCCCGC i nomLeu3.chr11 I 379 C 0 s chlSab2.chr15 426113 12 - 91754291 Gcctccccctgc i chlSab2.chr15 I 1 I 23 s calJac3.chr17 943758 8 - 74750902 -CCTCCCTC--- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074777 7 + 31377067 -----ACCCCGC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42350 489 + 111706 M e mm10.chr16 65438622 351 - 98207768 I e macFas5.chr2 77489 584 + 192460366 M e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=115891.000000 s hg38.chr3_KI270935v1_alt 132846 76 + 197351 cccTGGGGCTGAAGCCGGGAGGGGTCTGCACTGGAGGC-GGAGAA--GAGGCCGGCGAGCTGCACGCCCCGCTCGGGGG s ponAbe2.chr3 199791857 76 + 202140232 CCCCGGGGCTGAAGCCGGGAGGGATCCGCACTGGAGGC-AGAGAA--GAGGCCGGCAAGCTGCAGGACCCGCTGGGGGG i ponAbe2.chr3 C 0 I 19 s nomLeu3.chr11 120887786 76 + 123690457 CCCCAGGGCTGAAGCCGGGAGGGATCTGCACTGGAGGC-GGAGAA--GAGGCCGGCGAGCTGCAGGCCCCGCTGCGGGG i nomLeu3.chr11 C 0 I 4 s rheMac3.chrUn_JH291127 42847 77 + 111706 CCCCGGGACTGAAGCCTGCAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGGCGAGCTGCAGGCCCCGCTCCGGGG i rheMac3.chrUn_JH291127 M 489 I 1 s macFas5.chr2 78076 77 + 192460366 CCCCGGGACTGAAGCCTGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGGCAAGCTGCAGGCCCCGCTCCGGGG i macFas5.chr2 M 584 I 1 s chlSab2.chr15 426148 77 - 91754291 ccccGGGGCTGAAGCCGGGAGGAATCTGCACTGGAGGCGGGAGAA--GAGGCCGGCGAGCTGCAGGCCCCGCTCCGGGG i chlSab2.chr15 I 23 I 1 s calJac3.chr17 943766 78 - 74750902 CCCCGAGGCTGACACCCGGAGGGCTCCGCACTGGAGGCGGGAGAAGGGAGGCCGCGGAGCT-CAGGCCCGACTCCCAGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074784 61 + 31377067 -----GGCCCAAGACTTGGGGGGG-------AAGGGGC-AGGGGC--GGGGCGAG---GCTCCGAGGGCCGCTTGGGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=10346.000000 s hg38.chr3_KI270935v1_alt 132922 12 + 197351 TAGAGGCTGCGC s nomLeu3.chr11 120887866 12 + 123690457 AAGAGGCTGCGC i nomLeu3.chr11 I 4 C 0 s rheMac3.chrUn_JH291127 42925 12 + 111706 AAGAGGCTGCGC i rheMac3.chrUn_JH291127 I 1 I 6 s macFas5.chr2 78154 12 + 192460366 AAGAGGCTGCGC i macFas5.chr2 I 1 C 0 s chlSab2.chr15 426226 12 - 91754291 AAGAGGCTGCGC i chlSab2.chr15 I 1 C 0 s calJac3.chr17 943844 11 - 74750902 -AAAGGCTGTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29074845 6 + 31377067 -----CCTGGG- i canFam3.chr33 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=5976.000000 s hg38.chr3_KI270935v1_alt 132934 11 + 197351 TCTCTTGGCCC s nomLeu3.chr11 120887878 11 + 123690457 GCTCTTGGCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78166 11 + 192460366 GCACTTGGCCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426238 11 - 91754291 GCACTGGACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 943855 11 - 74750902 GCACTCGGCTC i calJac3.chr17 C 0 I 678 s canFam3.chr33 29074851 4 + 31377067 -------GCCT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 42937 6 + 111706 I e mm10.chr16 65438622 351 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=8239.000000 s hg38.chr3_KI270935v1_alt 132945 67 + 197351 -----TGCACCGCC---ACGCACCGGGCCCTGCACCGCCACGCACCGGGCCCGGCACCACAACGCACTCGGCCCT s nomLeu3.chr11 120887889 45 + 123690457 -----TGCACCGCC---ACGCACCGGGCCCTGCACCGCC----------------------ACGCAGTCGGCCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 78177 45 + 192460366 -----TGCACCGCC---ACGCACTGGACCCTGCACCGCA----------------------ACGCGCTCGGCCCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426249 27 - 91754291 -----TGCACCGCC---ACGCCCTGGACCCTGCAC---------------------------------------- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29074855 52 + 31377067 GGGGATGCCTTTCCCAGGGGCCCCGAGCCAAGC-CCACA----------------------GGACACCCCTTCTT i canFam3.chr33 C 0 I 85 e rheMac3.chrUn_JH291127 42937 6 + 111706 I e mm10.chr16 65438622 351 - 98207768 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=18544.000000 s hg38.chr3_KI270935v1_alt 133012 52 + 197351 GCACCGCCACGC---------ACCGGGCCCTGCACCGCAACGCACCCGGCCCTGCACCGCA s nomLeu3.chr11 120887934 52 + 123690457 GCACTGCCACGC---------ACCGGGCCCTGCACCACAACGCACCCGGCCCGGCACCGCA i nomLeu3.chr11 C 0 T 111 s macFas5.chr2 78222 52 + 192460366 GGATCGCCACGC---------CCTGGACCCTGCACCGCAACGCTCTGGGCCCTGCATGGCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426276 57 - 91754291 ----CGCCACACNNNNNNNNNNCTGGACCCTgcaccgcaacgcgctcggccctgcaccgcc i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 42937 6 + 111706 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=1665.000000 s hg38.chr3_KI270935v1_alt 133064 8 + 197351 ACGCACCG s macFas5.chr2 78274 8 + 192460366 ACGCCCTG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426333 8 - 91754291 acgcactg i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 42937 6 + 111706 I e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e nomLeu3.chr11 120887986 111 + 123690457 T e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=2484.000000 s hg38.chr3_KI270935v1_alt 133072 13 + 197351 GGCCCTGCACCGC s rheMac3.chrUn_JH291127 42943 13 + 111706 GGCCTTGCACAGC i rheMac3.chrUn_JH291127 I 6 C 0 s macFas5.chr2 78282 13 + 192460366 GACCCTGCCCCGC i macFas5.chr2 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e chlSab2.chr15 426341 0 - 91754291 C e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e nomLeu3.chr11 120887986 111 + 123690457 T e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=31409.000000 s hg38.chr3_KI270935v1_alt 133085 53 + 197351 CACGCACCCGGCCCTGCACCGCCACGCACCCGGCCCTGCACCGCCACGCACCG s nomLeu3.chr11 120887875 53 + 123690457 CGCGCTCTTGGCCCTGCACCGCCACGCACCGGGCCCTGCACCGCCACGCAGTC i nomLeu3.chr11 T 111 C 0 s rheMac3.chrUn_JH291127 42956 53 + 111706 CACACACTGGACCCTGCACCGCAACGCGCTCGGCCCTGGATCGCCACGCCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78295 53 + 192460366 AACGCGCTGGGCCCTGGATCGCCACGCACTGGACCCTGCACCGCCACACACTG i macFas5.chr2 C 0 T 44 s chlSab2.chr15 426341 44 - 91754291 ---------gaccctgcaccgccacgccctggaccctgcaccgccacgcactg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=20374.000000 s hg38.chr3_KI270935v1_alt 133138 44 + 197351 GGCCCTGCACCGCCACGCACCGGGCCCTGCACCACAACGCACCC s nomLeu3.chr11 120887928 44 + 123690457 GGCCCTGCACTGCCACGCACCGGGCCCTGCACCACAACGCACCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43009 44 + 111706 GACCCTGCACCGCAACGCGCTGGGCCCTGCATGGCCACGCCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78304 44 + 192460366 GGCCCTGGATCGCCACGCACTGGACCCTGCACCGCCACACACTG i macFas5.chr2 T 44 C 0 s chlSab2.chr15 426385 22 - 91754291 ----------------------gaccctgcaccgccacgccctg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e ponAbe2.chr3 199791933 19 + 202140232 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=11904.000000 s hg38.chr3_KI270935v1_alt 133182 11 + 197351 GGCCCTGCACC s ponAbe2.chr3 199791952 11 + 202140232 Ggccctgcacc i ponAbe2.chr3 I 19 C 0 s nomLeu3.chr11 120887972 11 + 123690457 GGCCCGGCACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43053 11 + 111706 GACCCTGCCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78348 11 + 192460366 GACCCTGAACC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426407 11 - 91754291 gaccctgcacc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29074907 85 + 31377067 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=26718.000000 s hg38.chr3_KI270935v1_alt 133193 30 + 197351 GCAAAGCACTCGGCGCGGCACCGCCACGCG s ponAbe2.chr3 199791963 30 + 202140232 gccacgcactgggccctgcaccgccacgca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120887983 30 + 123690457 GCAACGCGCTCGGCCCTGCACCGCAACGCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43064 30 + 111706 GCAACGCGCTGGGCCCTGGATCGCCACGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78359 30 + 192460366 GCAATGCGCTCGGCCCTGCACCGCAACACG i macFas5.chr2 C 0 T 41 s chlSab2.chr15 426418 30 - 91754291 gcaacgccctggacgctgcaccgccacacg i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29074992 21 + 31377067 GCGAGGCTCCCGGGGTGG---------GTG i canFam3.chr33 I 85 C 0 e mm10.chr16 65438622 351 - 98207768 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=1797.000000 s hg38.chr3_KI270935v1_alt 133223 25 + 197351 CCCGGCCCTGCACCACAACGCACCC s ponAbe2.chr3 199791993 25 + 202140232 ctgggccctgcaccgcaacgcgctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888013 25 + 123690457 GCTTCCCGCCCACCTCACTGCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43094 25 + 111706 CTGGACCCTGCACCGCCACACACTG i rheMac3.chrUn_JH291127 C 0 C 0 s chlSab2.chr15 426448 17 - 91754291 ctggaccctgcaccgca-------- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29075013 3 + 31377067 -----CCC----------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e calJac3.chr17 943866 678 - 74750902 I e macFas5.chr2 78389 41 + 192460366 T e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=1205.000000 s hg38.chr3_KI270935v1_alt 133248 2 + 197351 GG s ponAbe2.chr3 199792018 2 + 202140232 gg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888038 2 + 123690457 GG i nomLeu3.chr11 C 0 T 54 s rheMac3.chrUn_JH291127 43119 2 + 111706 GA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78348 2 + 192460366 GA i macFas5.chr2 T 41 C 0 e mm10.chr16 65438622 351 - 98207768 I e canFam3.chr33 29075016 0 + 31377067 C e calJac3.chr17 943866 678 - 74750902 I e chlSab2.chr15 426465 0 - 91754291 C e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=6816.000000 s hg38.chr3_KI270935v1_alt 133250 12 + 197351 CCCTGCACCGCC s ponAbe2.chr3 199792020 12 + 202140232 ccctgcaccgcc i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 43121 12 + 111706 CCCTGAACCGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78350 12 + 192460366 CCCTGAACCGCA i macFas5.chr2 C 0 C 0 s canFam3.chr33 29075016 12 + 31377067 CCCCAAGCCCCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e calJac3.chr17 943866 678 - 74750902 I e chlSab2.chr15 426465 0 - 91754291 C e papAnu2.chr2 74305 365 - 187378091 I e nomLeu3.chr11 120888040 54 + 123690457 T e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=57843.000000 s hg38.chr3_KI270935v1_alt 133262 69 + 197351 ACGCGCCCGGCCCTGCACCGCAACGCGGCTTCCCGCCCACCTCGCTGCTCCCGGTGCGGGGAGGGGGCG s ponAbe2.chr3 199792032 69 + 202140232 acgcacggggccctgcaccgcaacgcGGCTTCCCGCCCACCTCACTGCTCCCGGTGCGGGGAGGGGGCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120887986 69 + 123690457 ACGCGCTCGGCCCTGCACCGCAACGCGGCTTCCCGCCCACCTCACTGCTCCCGGTGCGGGGAGGGGGCG i nomLeu3.chr11 T 54 C 0 s rheMac3.chrUn_JH291127 43133 56 + 111706 ATGCGCTCGGCCCTGCACCGCAACACGGCTTCCCGCCCAGCTCGCTGCTCCC-------------GGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78362 56 + 192460366 ATGCGCTCGGCCCTGCACCGCAACACGGCTTCCCGCCCAGCTCGCTGCTCCC-------------GGAG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426465 56 - 91754291 acgcgctcggccctgcacagcaACACGGCTTCCCGCCCAGCTCGCTGCTGCC-------------GGAG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29075028 30 + 31377067 CCAAGCCCGACCCGAGGAGGCAGGGGAGCT--------------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65438622 351 - 98207768 I e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=10992.000000 s hg38.chr3_KI270935v1_alt 133331 10 + 197351 GCCGGCGCTC s ponAbe2.chr3 199792101 10 + 202140232 GCCGGCGCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888055 10 + 123690457 GCCGGCGCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43189 10 + 111706 GCAGGGGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78418 10 + 192460366 GCAGGGGCTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426521 10 - 91754291 ATAGGCGCTC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65438973 10 - 98207768 GCTGACATTA i mm10.chr16 I 351 C 0 s canFam3.chr33 29075058 10 + 31377067 GACGGCTGTC i canFam3.chr33 C 0 C 0 e calJac3.chr17 943866 678 - 74750902 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=382332.000000 s hg38.chr3_KI270935v1_alt 133341 169 + 197351 CCCAACCTACCTCCGCCGTCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAGCAGGACACGGATTGCGTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAGCCGACGCCCAGG-AAAGCAGCTGG s ponAbe2.chr3 199792111 169 + 202140232 CCCAGCCTACCTCCGCCGCCTTCATGGTCAGGCTGAAATGTCACAGTCTGGTTATCCAGCAGGACACGGATTGCGTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGGCCTGAGCCCGACCCGCAGGTGGAGCCGACGCCCAAG-AAAGCGGCTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888065 169 + 123690457 CTCAGCCTACCTCTGCCGTCTTCATGGCCAGGCTTAAATGTCACAGTCTGGTTATCCAGCAGGACATGGATTGCGTCGTGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAGGGGACCTGAGCCCCACTCGCAGGTGGAGCCGACGCCCAGG-AAAGCGGCTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43199 169 + 111706 CCCAGCCCACCTCCGCCGTCTCCATGTCCAGGCTCAAATGTCACAGTCTGGTTATCCAGCAGGACATGGATTCCATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAGCCGACGCCCAGG-AGAGCGGCTGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78428 169 + 192460366 CCCAGCCCACCTCCGCCGTCTCCATGTCCAGGTTCAAATGTCACAGTCTGGTTATCCAGCAGGACATGGATTCCATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAGCCGACGCCCAGG-AGAGCGGCTGG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426531 169 - 91754291 CCCAGCCCACCTCCGCCGTCTCCATGGCCAGGCTCAAATGTCACAGTCTGGTTATCCAGCAGGACATGGATTCCATCATGAGGCTCAAGGAGCCATTGGACCTGGAAGGAGATGGGAAGGGGTCTGAGCCCGACCCGCAGGTGGAGCCGACGCCCAGG-AGAGCGGCTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 944544 169 - 74750902 CCCACCCTACCTCCATCGTCTTCGTGGTCAGGCTCAAACGTCACATTCTGGTTGTCAAGCAGAACACGGATTCTGTCGTGAGGCTCAAGGAGCCACTGAACCTGCAAGGAGATGGGAGGGGAGCTGAGGCCGACCCGCAGGTGCAGCAGATGCCCAGG-AAAGCATAGGG i calJac3.chr17 I 678 C 0 s mm10.chr16 65438983 163 - 98207768 CGGAGCCTACCTTCAGTGTCT------CTGGTGTTAAAGGCCACAGTCTGGTTATTGTATACGACTCGGATTTTGTCACTGGGCTCAAGAAACCACTGAACCTGGGAAAGAATTGGAGGAGGCCTAAGCCCAACCAGCAGGCACAGCAGAGGCCTGGA-AATGAGGCCAG i mm10.chr16 C 0 I 1009 s canFam3.chr33 29075068 160 + 31377067 CCCAGCCTACCTTCG---------TGCTGAGTCTCAAACGTCACAGTCTGGTTGTTGACCTGCACGCGGACCGTGTCATTGGGCTCGAGGAGCCATCGGACCTGGGAGAGAATTGGAGGAGGCCTAAGCCGGACCCTCGGGTGGGCCCAGGGCCTGAGCATGGAGGCCA- i canFam3.chr33 C 0 C 0 e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=494625.000000 s hg38.chr3_KI270935v1_alt 133510 324 + 197351 GAGAGCCCCTGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAAGGCGCTGGAGGCCGCGGCCTGA-GGTGATGCCAGCCGCcgtctaccgtgt----gctcggca-gggccag--------gcatggttttcggattatgccctttagctcttacaacag-cccgtgaggcaggtaatg---tcatccccattcttactaggagaaaaccaaatta----------agtagtttcttcgaagccaagcagctgggaaaccgtggggccagagccctaatcca-CCATCCCCAGGATTTACTCCG-----GGACAGCTGCGTGGATGGGCTGTGTcctccctc--cctcctgcccggcttc s ponAbe2.chr3 199792280 323 + 202140232 GGGAGCCCCCGGG-CTGGAAGCTGCGCCCTGGGCCGGGAGGAAGGCGCTGGAGGCCGCGGCCCAA-GGTGATGCCAGCCGCcgtctaccgtgt----gctcggca-gggccag--------gcatggttttcggattatgccctttagctcttacaacac-cccgtgacgcaggtaatg---tcatcctcattcttactaggagaaaaccaagtta----------agtagtttcttcgaagccaaacagctgggaaaccgtggggccagagccctaatcca-CCATCCCCAGGATTTACTCCG-----GGACAGCTGCGTGGATGGGCTGTGTCCTCCCTC--CCTCCTGCCCAGCTTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888234 324 + 123690457 GAGAGCCCCCGGGGCTGGAAGCTGCGCCCTGGGCCGGGAGGAGGGCGCTGGAGGCCGCCGCCCGA-GGTGATGCCAGCCGCcgtctaccctgt----gctcagca-gggtcag--------gcatagttttcggattatcccctttagctcttacaacag-cccatgaggcaggtaatg---ttatccccattcttactaggagaaaaccaagttc----------agtagtttcttcgaagccaaacagctgggaaaccgtggggccagagccctaatcca-CCATCCCCAGGATTGACTCCG-----GGACAGCTGCGTGGATAGGATGTGTcctccctc--cctcctgcccagcttc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43368 321 + 111706 GAGAGCCCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAGGCGCTGGAGGCCGCGGCCCGA--GTGACGCCAG-CCCcgtctaccgtgt----gctccgca-gggccag--------gcatggttttcggatgagcccctttagctctcacaacag-cccgtgaggcaagtcatg---ttatccccgttcttaccaggagaaaaccaagtta----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAATCCC-CCATCCGCACGATTTACTCCG-----GGACAGCTGCGCGGATGGGGTGTGG-CTCCCTC--CCTCCTGCCCGGCTTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 78597 321 + 192460366 GAGAGCCCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAGGCGCTGGCGGCCGCGGCCCGA--GTGACGCCAG-CCCcgtctaccgtgt----gctccgca-gggccag--------gcatggttttcggatgagcccctttagctctcacaacag-cccgtgaggcaagtcatg---ttatccccgttcttaccaggagaaaaccaagtta----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAATCCC-CCATCCGCACGATTTACTCCG-----GGACAGCTGCGCGGATGGGGTGTGG-CTCCCTC--CCTCCTGCCCGGCTTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 426700 321 - 91754291 GAGAGCCCCCGGGGCTGGAAGCTGCGCCCTGGGCCTGGAGGAAGGCGCTGGAGGCCGCGGCCCGA--GTGACGCCAGCCCCcgtctacggtgt----gctccgca-gggccag--------gcatggttttcggatgatcccctttagctctcacaacag-cccgtgaggcaagtcatg---ttatccccgttcttaccaggagaaaaccaagtta----------agtagtttcttcgaagccaaacagctgggaaaccgtggcgccagAGCCGTAATCCC-CCATCCCCAGGATTTACTCCG-----GGACAGGTGCGCGGATGGGGTGTGG-CTCCCTC--CCTCCTGCCCGGCTT- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 944713 282 - 74750902 GAGAGTGCCTGGGGCTG-------------------GGAGGAAGGGGCTGGAGGCTGCAGCC------------------------actgtgt----gctctgca----ccag--------gcctggttttcagatgatccccttcaactcccacagcag-cctgtgaggcaggtaacgttattatccccattccgactagaag-aaaccaagtta----------agtagtttctttgaaaccaaacagctgggaaaccgtggtgccagaaACCTCATCCTGCCACCCCCAGGATTTACTCGG-----GGACAGCTGTGAGGGTGGAATGTGACCTCCCTC--CCTCCTGCCCGGCTTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29075228 318 + 31377067 CAGAGGGCCTGGA--------------CCCGAGCCCCGAGGACGAGGCGGGTGG-----GCCTGACGGTGAGGTTG--CGCCGCCGACAGCGCTAGGGCGCGGCATGGGCCGGCTGagagcgcacgtttctcagatgatctcatttaaagctcacaacagccccgtgaggcaa-tattg---tcatcctcagt-ttactccaagaaaagggaggcagaggcgcccgggtggctccttgggtg---agcctctg-----cctcgggcccaggg-cgtgatccc-tgggtcgtgggatcgagtcctgcatcgggctcctgcaggga--gcctgcgt-ctccctctgcctgtgtctctgc--- i canFam3.chr33 C 0 C 0 e mm10.chr16 65439146 1009 - 98207768 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=750777.000000 s hg38.chr3_KI270935v1_alt 133834 335 + 197351 ccctccttcgctctcttcc----------------------------------------------------------tTCTCCTCGGCCTCAGTATGTGGCTGAAGG----------------TCCCTGT-----GGG-----------TGGAATGCAGGGAGGTTCCC-------GGCA--------------------------------------------CCCCTCACTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGAAGCAGGAAGGAGGAGTTCCCGTCTTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAACTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAAGGAAAAAAG--AGATGCTGCCTCAGCA s ponAbe2.chr3 199792603 333 + 202140232 CCCTCCTTCGCTCTCTTCC----------------------------------------------------------TTCTCCTCGGCCTCAGTGTGTGGCTGAAGG----------------TCCCTGT-----GGG-----------TGGAATGAAGGGAGGTCTCC-------GGCG--------------------------------------------CCCCTCACTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGAAGGAAAA--G--AGATGCCGCCTCAGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888558 335 + 123690457 cccttcttcgctctcttcc----------------------------------------------------------ttctcccCGGCCTCAGTATGTGGCGGAAGG----------------TCCCTGT-----GGG-----------TGGAAGGCAGGGAGGTCCCT-------GGCG--------------------------------------------CCCCTCACTCACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACCGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCCACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTAATGTGGGGGTCCCCGAACATCCAGGCTGGAAGGAAAAAAG--AGATGCCGCCTCAGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 43689 332 + 111706 CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTCAGTGTGTGGCTGAAGG----------------TCCCTGT-----GGA-----------TGCAATGCAGGGAGGTCCCC--------GCG--------------------------------------------CCCCTCACTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT--GGGGAAAAAAG--AGATGCCGCCTCAGCA i rheMac3.chrUn_JH291127 C 0 I 327 s macFas5.chr2 78918 332 + 192460366 CTCTTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTCAGTGTGTGGCTGAAGG----------------TCCCTGT-----GGA-----------TGCAATGCAGGGAGGTCCCC--------GCG--------------------------------------------CCCCTCACTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGAGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCCGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGCCCCGACCAGCAGGAAGTCTCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCT--GGGGAAAAAAG--AGATGCCACCTCAGCA i macFas5.chr2 C 0 I 17 s chlSab2.chr15 427021 306 - 91754291 ---GTCTTCGCTGTCTTCC----------------------------------------------------------TTCTCCTCAGCCTCAGTATGTGGCTGA---------------------------------------------------------AGGTCCCC--------GCG--------------------------------------------CCCCTCACTCACCGTCACGGGG---CCCAGGCTGCCAGAGCGGTACTGGGCCGCAAAGGCGATGAAGTTGGTGGCCTGGGCTGAGCCAGTCTGGGCGGTGCGGCCCTGCAGCAGGAAGGAGGAGTTCCCGTCCTGGGTCCTGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTGACACCATCCAAGGTGGTGATGTGGGGGTCCCCGAACATCCAGGCTGGGGGGAAAAAAG--AGATGCTGCCTCAGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 944995 339 - 74750902 CCCTTCTTTCTCCTCTTCC----------------------------------------------------------TTCTCCTGGGCCTCAATATCCGGCTGAAGGTG-----------AAATGCCTGT-----GGG-----------TGAAATGCAGG-AGGTCCCA-------GGTG--------------------------------------------CCCCTCACGAACCGTGACGGGG---CCCAGGCTGCTGGAGCGGTACTGAGCAGCAAAGGCAACGAAGTTGGTGGCCTGGGCTGAGGCGGTCTGGGCGGTGCGGCCCTGCAGCTGGAAGGAGGAGTTCCCGTCCTGGGCCTGGACCAGCAGGAAGTCCCCCAGCCCATTGAAGGTGTAATTCACACCGTCTAAGGTGGTGATGTGGGGGTCCCCGATCATCCAGGCTGGAAGGAAAAAAG--AGATACCACATCAGCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65440155 335 - 98207768 CCTTTCTTTGTACTCTTCC----------------------------------------------------------TTTTC--------CAGTGTCCAGCTGACGG----------------TCTCTAA-----GGGGTTCTGGGGAAGGGATTGCAAGGATACCCTA-------GGTA--------------------------------------------CCCCTCACTTACCGTGATGGGAGACTTCAGGCTGCTGGTGTTGTATTGAGCCGCAAAGGCAATGAAGTTAGTGGCCTTGGCAGTGCCAGTCTGGGCAGTGCGGCCTTCCAGCAGGAAGGAAGAATTTCTGTCCTGGGCCTGGACCAGCAGAAAGTCTCCCAGCCCGTTGAAGGTGAAGTTGGCATTATCCAAAGTGGTGATGTGGGGATCACCAAATGTCCAAGCTAAAAGAAAGGAGGTTACATGCTA-------- i mm10.chr16 I 1009 C 0 s canFam3.chr33 29075546 455 + 31377067 --ctctctctgtgtctctcatgaataaataaataaaatcttaagaaaagaaaagtgaggcactggaaggtcagtagttcctccaggatcaca-----cggctgatggagccatgacccaaaTGGCACCGTTCATAGGG-----------TCGACTCTCGAGGTGTCCCCCGCCCCCGGCACCCCCTCCCTCTGCTCCCTCTGCCTCCTCCCCTCCTTGGAGCACCCCCTGGCTCACCGTGACGGGG---CTCAGGCTGCGGGCCTCATAGCTCGCTGCAAAGGCAATGAAGTTGGTGGCCCGGGCGGAGCCGGTCTGGGCGGTGCGACCCAGCAGCAGGAAGGAGGAGTTTCCGTCCCAGGCCCGGACCAGCTGGAAGTCACCCAGCCCATTGAACGTGTAATTGGCACCGTCCAAGGTGGTGATGTGGGGGTCCCCAAACATCCAGGCTGGAAG---AAAGG--AGAGGCCACGCTGGCG i canFam3.chr33 C 0 C 0 e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=6741.000000 s hg38.chr3_KI270935v1_alt 134169 15 + 197351 TGACAAATCATGTGT s ponAbe2.chr3 199792936 15 + 202140232 TGACAAATCATGCGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888893 15 + 123690457 TGACAAATCATGCGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79267 15 + 192460366 TGACAAACCAAGTGC i macFas5.chr2 I 17 C 0 s chlSab2.chr15 427327 15 - 91754291 TGACAAACCAAGTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945334 15 - 74750902 TGACACACCATGGGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65440490 7 - 98207768 -GCCAATT------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076001 7 + 31377067 CGGCTGG-------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e papAnu2.chr2 74305 365 - 187378091 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=38266.000000 s hg38.chr3_KI270935v1_alt 134184 25 + 197351 AGGGCTGAGGTTCCTCACTGCAGTC s ponAbe2.chr3 199792951 25 + 202140232 AGGGCCGAGGTTCCTCCCTGCAGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888908 25 + 123690457 AGGGCTGAGATTCCTCACTGCAGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79282 25 + 192460366 CCGGCTGAGATTCCTCACTGCAGTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74670 25 - 187378091 AGGGCTGAGATTCCTCATTATAGTT i papAnu2.chr2 I 365 C 0 s chlSab2.chr15 427342 25 - 91754291 CCGGCTGAGATTCCTCACTGCAGTC i chlSab2.chr15 C 0 I 314 s calJac3.chr17 945349 25 - 74750902 TGGGCTGAGATTCCTCACTGCAGTC i calJac3.chr17 C 0 C 0 s mm10.chr16 65440497 25 - 98207768 AGGGCCATGGACTCTTACTCCCAGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29076008 15 + 31377067 CGGGGTGCGGATCCC---------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=-14778.000000 s hg38.chr3_KI270935v1_alt 134209 16 + 197351 AGG---TGCGGCACTTGTC s ponAbe2.chr3 199792976 2 + 202140232 GG----------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888933 2 + 123690457 AG----------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79307 14 + 192460366 --CG--GGGGGCACCTGT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74695 14 - 187378091 --gg--gggggCACCTGT- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 945374 15 - 74750902 ---AGATAGGGCACTTGT- i calJac3.chr17 C 0 I 1 s mm10.chr16 65440522 5 - 98207768 --------AGGTA------ i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e canFam3.chr33 29076023 0 + 31377067 C e chlSab2.chr15 427367 314 - 91754291 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=11038.000000 s hg38.chr3_KI270935v1_alt 134225 11 + 197351 CAGGAGGACTC s macFas5.chr2 79321 11 + 192460366 CAGGTGGACTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74709 11 - 187378091 CAGGTGGACTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 427681 11 - 91754291 CAGGTGGACTC i chlSab2.chr15 I 314 C 0 s calJac3.chr17 945390 11 - 74750902 CAGGTGGACTC i calJac3.chr17 I 1 T 51 s mm10.chr16 65440527 7 - 98207768 ----AGGACTT i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e canFam3.chr33 29076023 0 + 31377067 C e ponAbe2.chr3 199792978 0 + 202140232 C e nomLeu3.chr11 120888935 0 + 123690457 C e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=3426.000000 s hg38.chr3_KI270935v1_alt 134236 4 + 197351 AGGG s macFas5.chr2 79332 4 + 192460366 AGGG i macFas5.chr2 C 0 I 151 s papAnu2.chr2 74720 4 - 187378091 AGGG i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 427692 4 - 91754291 AGGG i chlSab2.chr15 C 0 I 1 s calJac3.chr17 945350 3 - 74750902 -GGG i calJac3.chr17 T 51 I 1 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e mm10.chr16 65440534 0 - 98207768 C e canFam3.chr33 29076023 0 + 31377067 C e ponAbe2.chr3 199792978 0 + 202140232 C e nomLeu3.chr11 120888935 0 + 123690457 C e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=6706.000000 s hg38.chr3_KI270935v1_alt 134240 28 + 197351 TGAGGTTCCTCACTGCAGTCGACTGGGG s ponAbe2.chr3 199792978 6 + 202140232 ----------------------CTGGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888935 6 + 123690457 ----------------------GTGCGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 79487 28 + 192460366 TGGGATTCCTCACTGTAGTCAGGGGGGA i macFas5.chr2 I 151 C 0 s papAnu2.chr2 74725 28 - 187378091 TGGGATTCCTCACTGTAGTCAGGGGGGA i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 427697 28 - 91754291 TGGGATTCCTCACTGTAGTCAGGGGGGA i chlSab2.chr15 I 1 C 0 s calJac3.chr17 945354 28 - 74750902 TGAGATTCCTCACTGCAGTCAGATAGGG i calJac3.chr17 I 1 C 0 s mm10.chr16 65440534 19 - 98207768 ---------CCATCTTAGTTGGCTAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29076023 14 + 31377067 ---AGCCCCCCACGGCC----------- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 44021 327 + 111706 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=41114.000000 s hg38.chr3_KI270935v1_alt 134268 18 + 197351 CACTTGTCCGGGCGGACT s ponAbe2.chr3 199792984 18 + 202140232 CACTTGTCCAGGCCGACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888941 18 + 123690457 CACTTGTCCAGGCGGACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 44348 18 + 111706 CACTTGTCCAGGTGGACT i rheMac3.chrUn_JH291127 I 327 C 0 s macFas5.chr2 79515 18 + 192460366 CACTTGTCCAGGTGGACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74753 18 - 187378091 CACTTGTCCAGGTGGACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 427725 18 - 91754291 CACTTGTCCAGGTGGACT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945382 18 - 74750902 CACTTGTCCAGGTGGACT i calJac3.chr17 C 0 I 1 s mm10.chr16 65440553 1 - 98207768 ----------------C- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076037 12 + 31377067 ------TCCAGGCCAACT i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=1061571.000000 s hg38.chr3_KI270935v1_alt 134286 420 + 197351 -CAGCTGGGGAGATGTTCACAGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---CCGCTATTCTCACTCCTTCCCCAAC-TCAGGTACAAAGCCCCTCCACTGACCATCCA-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTTATCCAGATGCCACCTCCCGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTGGGCCTGGGCCCTGTCGCTCACCGGGCTGTGGGGGCCTGTATGTAGCACAGCCCACGTGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGTGGCTCCAGTTCCTGGGCTGCGGAGAACAGCA-GTGAGTCGGGGAGGTTGAGGACCTGGAGAA s ponAbe2.chr3 199793002 405 + 202140232 -CAGCTGGGGAGATGTTCACGGAGCACAGAATCCTCCCCTCAAGCCTCCTTGCATTTTCGTGCC---CCGCTATTCTCACTCCTTCCCCAAC-TCAGGTACAAAGCCCCTCCGCTGACCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCTCCTACTCCTCATCCAGACGCCACCTCCCGGAAGCCCAGAAGGTCCCCCTCCCCAGAGGCTCTTCCTGGGCCTGGGCCCTGTCGCTCACCGGGCCGTGGGGGCCTGTATGTAGCACAGCCCATGCGGGGCCGCCTCTGCTGGTACCGGGCACAGAGGTAGGGCTTGTCACTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTCCTGGGCTgcagggcagggcg-gtgagttgg--------------tggag-a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120888959 417 + 123690457 -CAGCTGGG--GATGTTCAGAGAGCACAGAATCCTCCCCTCAAGGCTTCTTGCA-TTTCATGCC---CCGCTACTCTCACTCCTTCCCCAAC-TCAGGTACAAAGCCCCTCCACTGACCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACGGCTCTGCCCCTACTGCTCATCCAGACGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTTCCTGGGCCTGGGCCCTGTCACTCACCAGGCCGTGGGGGCCTGTATGTAGCACAGCCCACGCGGGGCCGCTTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTCCTGGGCTGCGGAGAAGAGCA-GTGAGCTGGGGAGGCTGAGGACCTGGAGAA i nomLeu3.chr11 C 0 I 6 s rheMac3.chrUn_JH291127 44366 421 + 111706 -CAGCAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCCCTTTTGTGCC---CCACTATTCTCACTCCTTCCCCAACACCAGGTACAAAGCCCCTCCGCTGGCCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTCATCCAGATGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTGGGCCTGGGCCCTGAGGCTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTCCGGGGCTGCAGAGAGGAGCA-GTGAGTCGGTGAGGCTGAGGACCTGGAGGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 79533 421 + 192460366 -CAGCAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGCTCCTTGCACTTTTGTGCC---CCACTATTCTCACTCCTTCCCCAACACCAGGTACAAAGCCCCTCCACTGGCCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTCATCCAGATGCCACCTCCTGGAAGCCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTGGGCCTGGGCCCTGAGGCTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTCCGGGGCTGCAGAGAGGAGCA-GTGAGTCGGGGAGGCTGAGGACCTGGAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 74771 409 - 187378091 -CAGCAGGGGAGATGTTCACGGAGCACAGATTCCTCCCCTCAAGGC------------TGTGCC---CCACTATTCTCACTCCTTCCCCAACACCAGGTACAAAGCCCCTCCACTGGCCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTCATCCAGACGCCACCTCCTGGAAGCCCAgaagctccccctccccagaGGCTCTGCCTGGGCCTGGGCCCTGAGGCTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGAGGCAGCACCAGTTCTGCGGTTCCAGTTCCGGGGCTGCAGAGAAGAGCA-GTGAGTCGGGGACGCTGAGGACCTGGAGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 427743 421 - 91754291 -CAGCAGGGGAGATGTTCACGGAGCACAGATTCCTTCCCTCAAGGCTCCTTGCACTTTTGTGCC---CCACTATTCTCACTCCTTCCCCAACACCAGGTACAAAGCCCCTCCACTGGCCGTCCG-CCCATCACTGGCGTCATCTCCATC-TTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTCATCCAGATGCCACCTCCTGGAAGTCCAGAAGCTCCCCCTCCCCAGAGGCTCTGCCTGGGCCTGGGCCCTGACGCTCACCAGGCCGTGGGGGTCTGTATGTAGCACAGCCCACACGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTCAGGCTTGTCATTCCAGAGGCAGCACCAGCTCTGCGGTTCCAGTTCCGGGGCTGCAGAGAAGAGCA-GTGAGTCAGGGAGGCTGAGGACCTGGAGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945401 412 - 74750902 -CAGCTGGGGAGATGTTC-----TCATCGAATCCTCCCCTCAAGGC-CCCTGCACTTTCGTGCC---CC-CCATTCTCACTCCTTCTCCAGCACCAGGTACAAAGGGCCTCCATTTGCCATCAGCCCCATCACTGGCACCCTCTCCATCTTTCCCTTGTGGCCACAGCTCTGCCCCTACTCCTCATTCAGACGTCA--TCCCGGAGGCCCAGAAGCT-CCCCTCCCCAGATGCTCTGCCTGAGCCT-GGCCCTGACCCTCACCGGGCCGTGGTGGCCTGTATGCAGCGCAGCCTACTCGGGGCCGCCTCTGCTGGTACAGGGCACAGAGGTAGGGCTTGTCATTCCAGCGGCAGCACCAGCTCTGCGGCTCCAGTTCCTGGGCTGTGGAGAAGAGCA-GTGAGTCGGGGAGGCCGAGGACCTGGAGAT i calJac3.chr17 I 1 I 4 s mm10.chr16 65440554 374 - 98207768 ----TTGGGCAAATTCTCCAGGCATCCAGAATCTACCCCCAAAGTCCTCTTCCCTTGTAGTCCCTGGCCTCAGTCCTCATCCCTTTGCAAAAGCCATGTCCAAAGTCCCT--GTTTGCTGTTAG-CTTCACGCAAGACCTGTCAACATC-ATCCC-TGTGGCTGCAGTTCTG---------TTTAGGAAGTTGGCCCCTT--------------GCTAATCCACCCCA--------------------ACCATGATGCTCACCGGGCCGTGGGGGCCTGTACCCAGCACAGCTGACACGGGGCCGCCTAAGCTGGTACCAGACACAGAACGAGGGCTTGTCGTTCCATTGGCAGCACCAGTTCTGTGCCTCCTGCTCCTCATCTGTGAAGAAGGACA-GTTTGTCAGAG-GGCGGGGGCCCCGGGGAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29076049 314 + 31377067 CAGGCCCGCGAGATGCTCACGGAGTAGAGAA---------------------------CATCCC------------------------------------CAAAgcgccccc---------ccc-cccggcgcccAAGTCA----CATC-TACGGTTGC--------TTCGGCCCCC--------TCCCGGTGCCACCCAC--AAGGCCCCTCGGTTGGGCCCCACC----GCCCTGCCCAGG--------------CTCACCGGGCCTCGGGGGCCGGTACCCGGCGCAGCCCACGCGGGGCCGCCTCTGCTGGTACAGGGCGCAGAGCATGGGCCGGTCGCTCCAGCGGCAGCACCAGTTCTGGGGCTCCAGTTCTCGGCCTGTGGGGGAGAGCACATGTTGCGGGGAGACGCAGGACCTGCAGCA i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=-1014.000000 s hg38.chr3_KI270935v1_alt 134706 44 + 197351 GCTTGGCAGGGCAGGGT--GGTGTTGGTTGAGAGCTTGGCAGGGCA s ponAbe2.chr3 199793407 46 + 202140232 gcttggcagggcagggtggggtgttggtggagagcttggcagggca i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 44787 23 + 111706 ---------------------CCCAGCCGGAGAGCTGGGT--GGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 79954 23 + 192460366 ---------------------CCCAGCCGGAGAGCTGGGT--ggca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75180 22 - 187378091 ---------------------CCCAGCCGGAGAGC-GGGT--GGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428164 20 - 91754291 ---------------------CCCAGCCGGAGAGCTGGGT--G--- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945817 21 - 74750902 -------------------------GCTGGAGAGCGTGGCAGGGCA i calJac3.chr17 I 4 C 0 s mm10.chr16 65440928 24 - 98207768 ----------------------GCAACTGGCATGTTTGGAAGAGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29076363 20 + 31377067 ---------------------CCCAGCTGGGGGTTTGGGCA----- i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120889376 6 + 123690457 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=19056.000000 s hg38.chr3_KI270935v1_alt 134750 31 + 197351 GGGCGGTGTTGGTGGAGAGCTTGGCAGGGCA s ponAbe2.chr3 199793453 31 + 202140232 ggacggtgttggtggagagcttggcagggca i ponAbe2.chr3 C 0 I 351 s rheMac3.chrUn_JH291127 44810 24 + 111706 GGGTGGGGTCAGTGGAGAGCTTGG------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 79977 24 + 192460366 gggcggggtcagtgaagagcttgg------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75202 24 - 187378091 GGGCAGGGTCAGTGGAGAGCTTGG------- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 945838 24 - 74750902 GGACGGTGTTGCTGAAGAGCATGG------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65440952 19 - 98207768 TGGTGATATCAGCAGCAAG------------ i mm10.chr16 C 0 C 0 e canFam3.chr33 29076383 0 + 31377067 C e chlSab2.chr15 428184 0 - 91754291 C e nomLeu3.chr11 120889376 6 + 123690457 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=6528.000000 s hg38.chr3_KI270935v1_alt 134781 31 + 197351 GGGCGGTGTTGGTGGAGAGCTTGGCAGGGCA s ponAbe2.chr3 199793835 31 + 202140232 GGGCGGTGTTGGTGGAGAGCTTggcagggca i ponAbe2.chr3 I 351 C 0 s rheMac3.chrUn_JH291127 44834 10 + 111706 ---------------------TGGCAGGGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80001 10 + 192460366 ---------------------tggcagggca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75226 10 - 187378091 ---------------------TGGCAGGGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428184 5 - 91754291 --------------------------GGGCA i chlSab2.chr15 C 0 C 0 s mm10.chr16 65440971 17 - 98207768 --------------AGGAGTCAGGCGTGGCA i mm10.chr16 C 0 I 58 e canFam3.chr33 29076383 0 + 31377067 C e calJac3.chr17 945862 0 - 74750902 C e nomLeu3.chr11 120889376 6 + 123690457 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=12568.000000 s hg38.chr3_KI270935v1_alt 134812 12 + 197351 GGGC-----GGTGTTGG s ponAbe2.chr3 199793866 17 + 202140232 gggcagggcggtgttgg i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 44844 12 + 111706 GGGC-----AGTGTCGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80011 12 + 192460366 gggc-----agtgtcgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75236 12 - 187378091 GGGC-----AGTGTCGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428189 12 - 91754291 GGGC-----GGTGTTGG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65440988 58 - 98207768 I e canFam3.chr33 29076383 0 + 31377067 C e calJac3.chr17 945862 0 - 74750902 C e nomLeu3.chr11 120889376 6 + 123690457 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=73468.000000 s hg38.chr3_KI270935v1_alt 134824 41 + 197351 TGGAGAGCTTGGTAGGGCAGGGCGGTGTTGGTGGCAAGAGC s ponAbe2.chr3 199793883 41 + 202140232 tggagagcttggcagggcagggcagTGTTGGTGGCAAGAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120889382 41 + 123690457 TGGAGAGCTTGGCAGGGCAGGGCGGTGTTGGTGGCAAGAGC i nomLeu3.chr11 I 6 C 0 s rheMac3.chrUn_JH291127 44856 41 + 111706 TGGAGAGCTGGGTAGGACGGGGTGGTGTTGGTGGCAAGAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80023 41 + 192460366 tggagagctgggtaggacggggTGGTGTTGGTGGCAAGAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75248 41 - 187378091 TGGAGAGCTGGGTAGGACGGGGTGGTGTTGGTGGCAAGAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428201 41 - 91754291 TGGAGAGCTGGGTggggcagggtggtgttggtggcaagagc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65440988 58 - 98207768 I e canFam3.chr33 29076383 0 + 31377067 C e calJac3.chr17 945862 0 - 74750902 C e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=61943.000000 s hg38.chr3_KI270935v1_alt 134865 29 + 197351 ATGGCTTTGGAATCCAGCATGGCCCTTCT s ponAbe2.chr3 199793924 29 + 202140232 ATGGCTTTGGAATCCAGCATGGCCCTTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120889423 29 + 123690457 ATGGCTTTGGAATCCAACGTGGCCCTTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 44897 28 + 111706 ATGGCTTTGGAATCCAGCACGGCCC-TCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80064 28 + 192460366 ATGGCTTTGGAATCCAGCACGGCCC-TCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75289 28 - 187378091 ATGGCTTTGGAATCCAGCACGGCCC-TCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428242 28 - 91754291 atggctttggaatccagcaCAACCC-TCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945862 25 - 74750902 ----CTTTGGAATGCAGCATGGCCCTTCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29076383 29 + 31377067 ACGGCGCCGGACTCGGGTCCTGCCCTGCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65440988 58 - 98207768 I e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=452418.000000 s hg38.chr3_KI270935v1_alt 134894 214 + 197351 -CA-TGACCTTGGGCAGTGAATAGGGTGCTGTCTCTTTTGCAGGC--ATTGGGGCCACTGTGCAGCAGG-------GCGCATGGTAGGAGCTAAGCAAATTTCCTGTCTTGAGGGTGGAGAGCCAAGTACTGCTGCTCTCAACGTGCTGGGAGTGGGGAGGGCACGGCTGACGGTCTGGGAACTGTGGAAACTGCCATGG-------------------GACGGGGGAGAGAACGGGAGGACAC-- s ponAbe2.chr3 199793953 212 + 202140232 -CA-TGACCTTGGGCAGTGGACAGGGTGCTGTCTCTTTTGCAG-C--ATGGGGGCCACTGTGCAGCAGG-------GCGCATGGTAGCAGCTAAGCAAATT-CCTGTGTTGAGGGTGGAGAGCCAAGTACTGCTGCTCTCAACGTGCTGGGAGTGGGGAGGGCACGGCTGACAGTCTGGGAACTGTGGAAACTGCCACGG-------------------GACAGGGGAGAGAAGGGGAGGACAC-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120889452 211 + 123690457 -CG-TGACCTTGGGCAGTGGACAGGGTGCTGTCTCTTTTGCAGGC--ATTGGGGCCACTGTGCAGCAGG-------GCGTATGGTAGGAGCTAAGCAAATT---CGTCTTGAGGGTGGAGAGCCAAGTACTGCTGCTCTCAATGGGCTAGGAGTGGGGAGGGCATGGCTGACAGTCTGGGAACTGTGGAAACTGCCGTGG-------------------GACAGGGGAGAGAAGGGGAGGACAC-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 44925 214 + 111706 -CG-TGACCCTGGGCAGTGGACAGGGTGCTGTCTCTTTTTCAGGC--ACTGGGGCCACTGTGCAGCAGG-------GTGCATGGTAGGGGATAAGCAGATTTCCTGTCCTGAGGGTGGACAGCCAAGTACTGACACTCTCAACATAATGGGAGTGTGGAGGGCACGGCTGACAGTCAGGGAACTGTGGAAACTGCCAAGG-------------------GACAGGGGAGAGAACGGGAGGACAC-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80092 214 + 192460366 -CG-TGACCCTGGGCAGTGGACAGGGTGCTGTCTCTTTTTCAGGC--ACTGGGGCCACTGTGCAGCAGG-------GTGCATGGTAGGGGATAAGCAGATTTCCTGTCCTGAGGGTGGACAGCCAAGTACTGACACTCTCAACATAATGGGAGTGGGGAGGACACGGCTGACAGTCAGGGAACTGTGGAAACTGCCAAGG-------------------GACAGGGGAGAGAACGGGAGGACAC-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75317 214 - 187378091 -CA-TGACCCTGGGCAGTGGACAGGGTGCTGTCTCTTCTGCAGGC--ACTGGGGCCACTGTGCAGCAGG-------GTGCATGGTAGGGGATAAGCAGATTTCCTGTCCTGAGGGTGGACAGCCAAGTACTGACACTCTCAACATaatgggagtggggagggcaTGGCTGACAGTCAGGGAACTGTGGAAACTGCCAAGG-------------------GACAGGGGAGAGAATGGGAGGACAC-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428270 205 - 91754291 -CG-TGACCCTGGGCAGTGGACAGGGTGCTGTCTCTTT--CAGGC--ACTGGGGCCACTGTGCAGCAGG-------GCGCATGGTAGG-----AGCAGATTTCCTGTCTGGAGGGTGGACAGCCAAGTACTGACGCTCTCAACGTGCTGGGAGTGGGGAGGGCATGGCTGACAGTCAGGGAAC--GGGAAACTGCCAAGG-------------------GACAGGGGAGAGAACGGGAGGACAC-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 945887 214 - 74750902 -CATTGACCTTGTGCGGTGGACAGGGCGCTGTCTCTTTTGCAGGC--ATTGGGG-GACTGTGCAGCAGA-------GCACATGGTAGGAGCTAAGCACATTTCCTTTCTTGAGGGTGGAGAGCCAAGAACCACCGCCCTCAACATGCTGGGAGTGGGGAGGGTGCGGCTGACAGTCCAGGAACTGTGGAAACTGCCATGG-------------------GACGGGTGAGAGAACGAGAGGACAC-- i calJac3.chr17 C 0 C 0 s mm10.chr16 65441046 136 - 98207768 -TA-TGTCCTCGTTGAACGAATGG-------------------------TGGGGTTATTACATAGCA------------CATAGTA-------------------------------------CAAG--------CCCTCAGAGAGCCAGCAGAAGGGAGAACAGAGATGATGGCATGAAGATACGAGAGACT-----AG-------------------AGCAGTCCCCAGGGTGGGCAGATGC-- i mm10.chr16 I 58 C 0 s canFam3.chr33 29076412 239 + 31377067 TGG-TAACCTCGGGCCGTGGACCGGTCACCATCTCCCTCGCACGCTTGCTGGGGCAGCAAAGCCCCAGGGGCCCGAGCTCGTGGCTGTGGCTAAGGGGCTTGCTTTCTTGAAGGGTGGCGG--TGGGTCCCCCTGCCCCCAAAGTGC-AGGAGCG-GGAGGGTATGACCGCCAGTCTGGGGACCCTGGAGGCTGCTGTGATGGCCGGGGGCAGAGCAGTGGCAGGGGGTGGAA--GGAGGACCCAC i canFam3.chr33 C 0 I 122 e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=649886.000000 s hg38.chr3_KI270935v1_alt 135108 233 + 197351 AGACCA-------------------------CGTGACCCCA--CACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGTCAGCCTAGGCGCTCTCTTCTTGCCTGGAGAAATGGCCCCACTCTGGCCTGGGGATGTGGAGCCAGGTATAGAGATGAGGAAAGAGGCTCTCAGCtcatacatcccc-gaatgtccgctg s ponAbe2.chr3 199794165 233 + 202140232 AGACCA-------------------------CGTGACCCCA--CACCCCTGCGCTCTCCAGCTCCCTTGGAGCGTCTCTGTAG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGTCAGCCTAGGCGCTCTCTTCTTGCCTGGAGAGATGGCCCCACTCTGGCCTGGGGATGCGGAGCCAGGTATAGAGATGGGGAAAGAGGCACTCAGCtcatacatcccc-gaatgtccgctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120889663 233 + 123690457 GGACCA-------------------------CGTGACCCCA--CACCCCTGCGCTCTCCAGCTCCCTTGGAGGGTCTCTGTGG-GAGCTGACTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACGGGGTCAGCCTAAGCGCTCTCCTCCTGCCTGGAGAGATGGCCCCAGTCTGGCCTGGGGATGCGGAGCCAGGTATAGAGATGGGGAAAGAGGCACTCAGCtcatacatctcc-gaatgtctgctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 45139 232 + 111706 AGACCA-------------------------CGTGA-CCCA--CGCCCCTGCGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGTCAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGCCCCACTCTGGCCTAGGGATGCGGAGCCAGGTACGGAGATGGGCAAAGAGGCACTCAGCTCACACatcccc-gaatgtccgctg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 80306 232 + 192460366 AGACCA-------------------------CGTGA-CCCA--CGCCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGTCAGCCTAGGTGCTCTCTTCTTGCCTGGAGAGATGGCCCCACTCTGGCCTAGGGATGCGGAGCCAGGTACGGAGATGGGCAAAGAGGCACTCAGCTCACACATCCCC-GAATGTCCGCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 75531 232 - 187378091 AGACCA-------------------------CGTGA-CCCA--CACCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCCGGGTCTACAGGGACAGGGTCAGCCTAGGCGCTCTCTTCTTGCCTGGAGAGATGGCCCCACTCTGGCCTAGGGATGCGGAGCCAGGTACGGAGATGGGCAAAGAGGCACTCAGCTCACACATCCCC-GAATGTCTGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 428475 232 - 91754291 AGACCA-------------------------CGTGA-CCCA--CACCCCTGTGCTCTGCAGCTCCCTTGGAGGGTCTCTGCGG-GAGCTGATTCTCAGTCTTCCCCC--AAACATCCTGCTCATCTGGGTCTACAGGGACAGGGTCAGCCTAGGCGCTCTCTTCTTGCCTGGAGAGATGGCCCCACTCTGGCCTAGGGATGTGGAGCCAGGTACGGAGATGGGCAAAGAGGCACTCAGCTCACACATCCCC-GAATGTCCGCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 946101 232 - 74750902 AGACCA------------------------CCGTGACCCCT--CGTCCCTGTGTTCTCCAGCTCTGTTGGAGGGTCTCTATGG-GAGCTGACTCTCAGTCTTCCCCC--AAACAGCCTGCTCATCTGGGTCTACAGGGACAGGGTCAGACTATGTGCTCTCTTCTTGCCTGGAAAGATGACTCCACTCTGGCCTGGGGCTACGGGGCCAGGT--GGAGATGGGGAAAGAGGCACTCAGCTCATTCATCCCC-gaatgtcagctg i calJac3.chr17 C 0 C 0 s mm10.chr16 65441182 225 - 98207768 AAGCCA-------------------------CCCTTTTCTATTTACCTCTGTGTACCCTGGCTCCCTTGGAAGGTCTTTATGGTGAGGTGATTCTAAGTCTTTCCCCCAAAACATCCTGTTATCATGGGACCAGA-GGATAACATCAAAGTAGGCCCTCTTCCTTGGCCTAGAAAGATT-CTCCACTTTGGGCTGAGGGCACAAGGCCAAAT--GAAGATAG---AAGACACATTCTGTCCTAA----TCT-GAGAGACTAC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 29076773 253 + 31377067 agatcatgatctcagtgttgtgagattgagccctgg-cccc--cagccccgtgctCTCTGGCTCTTCTGGAAGGTCTCTGTGG-GAGATGACTCCATGTCTCCCCCG--AGACAGCCAGGTAATCTGGGTCCTGAGGCACAGGGTCAGACTGGG-GCCCCCTCCTTCCCCAGA-ACATGGCCCCATTCTTGTCTGGGGCCCTGTGGCCAAGT--GAAGATGGGGCAAGAGGCACTCAA-TCATAAGTCCCTAGGATGGCAGCTG i canFam3.chr33 I 122 C 0 e panTro4.chr3_GL389630_random 96342 2340 + 103936 I a score=2454526.000000 s hg38.chr3_KI270935v1_alt 135341 644 + 197351 gtggggatgttggaagcttcctaac-gttacccgatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACGAGAGGCTTCATGCTGAGGGTCCC-CT-ACTTGGCC---------------------------------------------GGGAA--------GGT-GGGGTTGAGAT---CACGGACT--CACGCACCCAACTGCCAAGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAAGAGGTGAAGCTGCACAGCTGCCTACTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCGGGGCTGCCAGGGGCGGGGTGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGGA----------------------------------------------------------GAGG------------------------------CTGAGGGCGTGAGCAGAGAGGGTGGTGGGTGGGCTTGTGGGG--------------------GGCGGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTTGGAGGCCTGAGGTC-GGGGATGG---GGGGGAAAGGGCTTAT-CCAGGGC s panTro4.chr3_GL389630_random 98682 643 + 103936 GTGGGGATGTTGGAAGCTTCCTAAC-GTTACCCGATCAGGAAGTGGAGGCCCAGAGAGGGGAAGGGTCTGGGAA-GGAATGAGGACAAGAGGCTTCATGCTGAGGGTCCC-CT-ACTTGGCT---------------------------------------------GGGAA--------GGT-GGGATTGAGAT---CACGGACT--CACGCACCCAACTGCCAAGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGCCTGCTGCCAAGGCCCCAGCGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CTGGGGCTGCCAGGGGCGGGGTGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGGA----------------------------------------------------------GAGG------------------------------CTGAGGGCATGAGCAGAGAGG-TGGTGGGTGGGCTTGTGGGG--------------------GGCGGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTTGGAGGCCTGAGGTC-GGGGATGG---GGGGGAAAGGGCTTAT-CCAGGGC i panTro4.chr3_GL389630_random I 2340 C 0 s ponAbe2.chr3 199794398 650 + 202140232 gtggggatgttggaagcttcctaacagttaccagatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGCTGAGGGTCCC-CT-GCTTGGCT---------------------------------------------GGGAG--------GGT-GGGGTTGAGATCTCCACAGACT--CACGCACCCAACTGCCAAGGACGCGGCACGTGCCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCACAGCTGCCCGCTGCCGAGGCCCCAGCGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCAGGGCTGCCAGGGACGGAGCGGGAACCAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGGA----------------------------------------------------------GAGG------------------------------CTGAGGGCGTGAGCAGAGAGGGTGGTGGGTCGGCTTGTGCGG--------------------GGCGGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCGTCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTGCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCTGGTGTAGCCTGTAGAACTGCAGTCCTCGGAGGCCTGAGGTTGGGGGATGC---GGGGGAAAGGGCTTATCCCAGGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120889896 649 + 123690457 gtggggatgttggaagcttcctaat-gttaccagatcaggaagtggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGCTGAGGGTCCT-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGTTGAGATCTCCACGCACT--CACGCACCCAACTGCCAAGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGATGTGAAGCTGCACAGCTGCCTGCTGCCGAGGCTCCGGCGTCCTGAAACAAGCCCAGTCCCACTCAGGCCCAGG---CCGGGGCTGCCAGGAGCGGGGCGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGGA----------------------------------------------------------GAGG------------------------------CTGAGGGCATGAGCAGAGAGGGTGGTGGGTGGGCTTGTGGGG--------------------GGCGGGAAGGAGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACCGAGGCTGGCTCTTCAGCCACTGCAGGCACTCAAGACAGTAGTTGGGCCTTTCTTCCAGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGAGGTC-GGGGATGGG-AGGGGGGAAGGGCTTAT-CCAGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 45371 732 + 111706 gtggggatgttggaagcttcctaat-gttaccagatcaggaaatggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCACGCTGAGGGTCCC-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGTTGAGATCTCCATGGACT--CACGCACCGAACTGCCAGGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGCCTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCGGGGATGCCAGGGGCGGGGCGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGAAgagcgcgcgagcagagagggcgggaggctgagggcgcgagcagagagggcgggaggctgagggcgcgagc-------agagagggcgggaggctgagggcgcgagcagagagggtggtgggtgagcttgtgggg--------------------ggcgggaaggtggTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGcaggagacctggttccagccccagctgggccactgaGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGGGGTCAGGAGATGGGGAGAGAGAAAGGGCTTAT-CCAGGGC i rheMac3.chrUn_JH291127 C 0 I 34 s macFas5.chr2 80538 674 + 192460366 GTGGGGATGTTGGAagcttcctaat-gttaccagatcaggaaatggaggcccagagaggggaagGGTCTGGGAA-GGAATGAGGACAAGAGGCTTCACGCTGAGGGTCCC-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGTTGAGATCTCCATGGACT--CACGCACCGAACTGCCAGGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGCCTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCGGGGATGCCAGGGGCGGGGCGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGAA----------------------------------------------------------GAGGGCGCGAGC-------AGAGAGGGCGGGAGGCTGAGGGCGCGAGCAGAGAGGGTGGTGGGTGAGCTTGTGGGG--------------------GGCGGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGGGGTCAGGAGATGGGGAGAGAGAAAGGGCTTAT-CCAGGGC i macFas5.chr2 C 0 I 1 s papAnu2.chr2 75763 673 - 187378091 GTGGGGATGTTGGAAGCTTCCTAAT-GTTACCAGATcaggaaatggaggcccagagaggggaagggtc-GGGAA-GGAATGAGGACAAGAGGCTTCATGCTGAGGGTCCC-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGTTGAGATCTCCATGGACT--CACGCACCGAACTGCCAGGGACGCTGCACGTGCCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGCCTGCTGCCTAGGCCCAAGAGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCGGGGATGCCAGGGGCAGGGCGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGAA----------------------------------------------------------GAGGGCGCGAGC-------AGAGAGGGCGGGAGGCTGAGGGCGCGAGCAGAGAGAGTGGTGGGTGAGCTTGTGGGG--------------------GGCGGGAAGGTGGTGTC--ACCTATGCTGACGGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAGCCCCAGCTGGGCCACTGAGGCTGGCTCTTCAGCCACTGCAGGCACTCGAGACGGTAGTTGGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGGGGTcaggagatggggagagagaaagggcttat-ccagggc i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 428707 645 - 91754291 GTGGGGATGTTGGAagcttcctaat-gttaccagatcaggaaatggaggcccagagaggggaagggtctGGGAA-GGAATGAGGACAAGAGGCTTCATGCTGGGGGTCCC-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGTTGAGATCTCCATGGACT--CACGCACCGAACTGCCAGGGATGCTGCACATGCCAGCCTTCACGAAACTCTCCCCACGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGACGTGAAGCTGCAGAGCTGCCTGCTGCCGAGGCCCAAGAGACCTGAAACAAGTCCAGTCCCACTCAGGCCCAGG---CCGGGGATGCCAGGGGCAGGGCGGGAACAAGCA-GGGGCTGTTTC------------------------------------------------------------TGGGAA----------------------------------------------------------GAGGGCGCGAGC-------AGAGAGGGC-----------------------------GGTGGGTGAGCTTGTGGGG--------------------GGCGGGAAGGTGGTGTC--ACCTATGCTGACAGGTTGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGcaggagacctggttccagccccagctgggccactgaggctggctcttcaaccACTGCAGGCACTCGAGACGGTAGTTAGGCCTTTCTTCCCGGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGGGGTCAGGAGATGGGAAGAGAGAAAGGGCTTAT-CCAGGGC i chlSab2.chr15 C 0 I 34 s calJac3.chr17 946333 644 - 74750902 gtgaggatgttggaagcttcctaac-tttacaagatcaggaaatggaggcccagat-ggggaagggtctGGGAAGGGAATGAGGAC-AGAGGCTTCATCCTGAGGATCCC-CT-GCTTGGCT---------------------------------------------GGGAA--------GGT-GGGGCTGAGA-------GGACT--CAC-CACCAAACTGCCGAGGACTCTGCACGTGCCAGCCTTCACGAAGCTCTCCCCAGGGCCCGTAGCTGCAGCACACGCCTCCTCGCCAGGAGGTGAAGCTGCAGAGCTGCCTGCTGCCGGGGGCCCACCGACCTGAAACAAGTCCAGTCGTGCTCAGGCCCAGG---CTGGGGCTGCCAGGGGTGGGCCGGGAACAAGCAGGGGGTTGTTTC------------------------------------------------------------TGGGAA----------------------------------------------------------GAGG------------------------------CTGAGGGCATGAGCAGAGAGGATGGTGGGTGGGCTTGTGGGG--------------------GACAGGAAGGAAGTGTC--ACCTATGCTGACGGGTCGGAATCGTAAGTCCCATCGTCCCTGCTGCCAGGAACAAGGGCAGGAGACCTGGTTCCAACCCCAGCTGGGCCACTGAGGCTGGCTCCTCAGCCACTGCAGGCACATGAGACGGTAGTTGGGCCTTTCTTCCCTGTGTAGCCTGTAGAACTGCAGCCCTCGGAGGCCTGGGGTTGGGGGATGGGGAGGAAAAAAGGGCTTATCCCAGGGC i calJac3.chr17 C 0 I 1 s mm10.chr16 65441407 713 - 98207768 --AAGGAAGATGGCAGGTTCTGAAC-TTTTCAAGATCAGGGGACTGGGACC---AGAGAGAAAGCATCTGGGAA-GCATTGGGATCAAGAGGCTTCATCCGGAAGGTCCC-ATAGCCTGTCT---------------------------------------------GAGAAGAGCCGCGGGC-GGGGTTAAGGTCTCCAGGAAGA--TACTTACCAAACTGCCAAGGACTGTGCATTCTCCAGCCTTCTCGAAACTCTCCCCAGGCACCATAGCTGCAGCACACACCCCCTCGCCCGGAGGAGAAGCTGCACAGCTGCCT---------GTCCCACCAACCTGCAAAGAGACCAGACATCCTCAGGTCCAGG------AGCTTGTGACAGGTGAGGCGGGA--------GGGGCtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgGTGCTGTCTCTCTGTGGGGG----------------------------------------------------------GAGGGGCTCAGCGTGTCTGGGAGAGGGCAGGAC-----AGGTGTGAGCAGAGGTGATGGCCGGTGGGCTTGTCAAG--------------------GGCAGGAAGGAAGTATC--ACCTGGGTTGATGGGCCTGAACCGAAAGTCCCGTTGTCCCTGCTGCCAGGAGCAAGGGCAGGAAACTGAGCTCCAGCCCCAGCTGGGCTGCTGAGGCTGACTCTCCAGCCACTGCAGACATTTGAGCCGGTAGTTGGGCCGCTCCTCCCTGTGCAGCCTGTAGACCTGCAGTCCCCGGATGCCTG------AGGAACAA---GGAAAGCAGTGCTTATGTCAGAAC i mm10.chr16 C 0 I 1 s canFam3.chr33 29077026 737 + 31377067 GAAGGGCTGCTGGAAGCTTCCCAGT-GTTACAACATGAGGAAATCAGTGGCCAGAGAGGGTAAGGGGCTGGGAG-GGAAGGGGGGCGAAAGGCTTCTTTCTTCAGATCCCACT-ACTTGGCTCGGAGGCCCAGGCCTGGTCTCTGACAGAGAAGGGTAGAGACTCCAGAGAA--------GGTGGGGGGTGAGATGTCCGTGAACACGCACGTACCAAACTGCCAAGGATCGTGCACCCTCCAGCCTTGGAGAAGCTCGCCCCAGGGCCCGTAGCTGCAGCACACGCCCCCGCGCCAGGAGGAGAAGCTGCACAGCTGCCTGCTGCCGAGGCCCCACCAGCCTGCAACGGGTACAGACACGCTCAGGCCCAGAGGCCCGGGAGCG---GGGGAGGGACGGGA---GGCT-GGGGGGGACCC------------------------------------------------------------TGGGG-----------------------------------------------------------GAGGGGCCGAGGGTGCCCTGGAAGGGACAGGTC-----AGGCGTGACCGGAG-GGTTGGTGGGTGGGCTTACGGGGGCGGTGGGCATGCCCCAAGAGGCAGGGAGGAGCTCTCTTACCTATGCTGCTAGGCTGGAACCGCAAGTCCCACAGTCCCTGCTGCCAGGAGCAAGGGCAGGAGACCTGGTTCCAGCCCCACGTGGGCCACTGAGGCTGTGTCTTCAACCACTGCAGGCACCTGAGACGGTAGTTGGGCCTTTCTTCCTGGTGCAGGCTGTAGAGCTGCAGGCCCCGGAGGCCTAG-----CGGAACAGAGGAGGGAGGGATGCTGCT-CCAGGGC i canFam3.chr33 C 0 I 2 a score=4193.000000 s hg38.chr3_KI270935v1_alt 135985 7 + 197351 -TGGGGCT s panTro4.chr3_GL389630_random 99325 7 + 103936 -TGGGGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795048 7 + 202140232 -TGGGGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890545 7 + 123690457 -TGGGGCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 81213 6 + 192460366 -TGGGCC- i macFas5.chr2 I 1 C 0 s papAnu2.chr2 76437 6 - 187378091 -tgggcc- i papAnu2.chr2 I 1 I 27 s calJac3.chr17 946978 7 - 74750902 -TGGGGCT i calJac3.chr17 I 1 C 0 s mm10.chr16 65442121 6 - 98207768 -CAGGCT- i mm10.chr16 I 1 C 0 s canFam3.chr33 29077765 7 + 31377067 CAGGGCC- i canFam3.chr33 I 2 C 0 e rheMac3.chrUn_JH291127 46103 34 + 111706 I e chlSab2.chr15 429352 34 - 91754291 I a score=29586.000000 s hg38.chr3_KI270935v1_alt 135992 26 + 197351 GCAGGCCCTGTCTCAGCTTTAGGGTC s panTro4.chr3_GL389630_random 99332 26 + 103936 GCAGGCCCTGTCTCAGCTTTAGGGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795055 26 + 202140232 GCAGGCCCTGTCTTAGCTTTAGGGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890552 26 + 123690457 GCAGGCCCTGTCCTAGCTTTAGGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 81219 7 + 192460366 -------------------TGGGGTC i macFas5.chr2 C 0 I 20 s calJac3.chr17 946985 26 - 74750902 GGAGGCCCTGTCTTAGCTTTAGGGTC i calJac3.chr17 C 0 C 0 s mm10.chr16 65442127 26 - 98207768 GCAAGCTCAGTTCCAGCTTCAGACTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29077772 21 + 31377067 GCACGCTCTGCATTAGC-----GACC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 46103 34 + 111706 I e chlSab2.chr15 429352 34 - 91754291 I e papAnu2.chr2 76443 27 - 187378091 I a score=50742.000000 s hg38.chr3_KI270935v1_alt 136018 47 + 197351 --AACCAAAACTCACAAATGCACCCCCTCCTGCCACTTCTCACCTCTTT s panTro4.chr3_GL389630_random 99358 47 + 103936 --AACCAAAACTCACAAATGCACCCCCTCCTGCCACTTCTCACCTCTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795081 47 + 202140232 --AACCAAAACTCACAAATGCACCCCCTCATGCCACTTCTCACCTCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890578 47 + 123690457 --AACCAAAACTCACAAATGCACCCCCTTATGCCGCTTCTCACCTCTTT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 947011 45 - 74750902 --AACGAAAACTCACAAATGCACCCCC--GTGCCACTTCTCACCTCTTT i calJac3.chr17 C 0 I 18 s mm10.chr16 65442153 45 - 98207768 --AACGCAAACTCCTGGCTGCATCCTC--CATCCATGTCCTGCCTCTCT i mm10.chr16 C 0 I 20 s canFam3.chr33 29077793 46 + 31377067 GAGACC--GACTCACAGATGCACCTTCTGCTACCGCCTCT-GCCTCTCG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 46103 34 + 111706 I e chlSab2.chr15 429352 34 - 91754291 I e macFas5.chr2 81226 20 + 192460366 I e papAnu2.chr2 76443 27 - 187378091 I a score=16833.000000 s hg38.chr3_KI270935v1_alt 136065 4 + 197351 GGAC s panTro4.chr3_GL389630_random 99405 4 + 103936 GGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795128 4 + 202140232 GGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890625 4 + 123690457 GGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46137 4 + 111706 GGGC i rheMac3.chrUn_JH291127 I 34 C 0 s macFas5.chr2 81246 4 + 192460366 GGGC i macFas5.chr2 I 20 C 0 s papAnu2.chr2 76470 4 - 187378091 GGGC i papAnu2.chr2 I 27 C 0 s chlSab2.chr15 429386 4 - 91754291 GGGC i chlSab2.chr15 I 34 C 0 s calJac3.chr17 947074 4 - 74750902 GGAC i calJac3.chr17 I 18 C 0 s mm10.chr16 65442218 4 - 98207768 GGAT i mm10.chr16 I 20 C 0 s canFam3.chr33 29077839 4 + 31377067 GGAC i canFam3.chr33 C 0 I 864 a score=104898.000000 s hg38.chr3_KI270935v1_alt 136069 34 + 197351 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG s panTro4.chr3_GL389630_random 99409 34 + 103936 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795132 34 + 202140232 CCAAGTCAGATGGGCAACAATTCCTCCCCCAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890629 34 + 123690457 CCAAGTCAGATGGGCAATAATTCCTCCCCCAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46141 34 + 111706 CCACGTCAGGTGGGCAAGGATTCCTCCCCCAAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81250 34 + 192460366 CCACGTCAGGTGGGCAAGGATTCCTCCCCCAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76474 34 - 187378091 CCACGTCAGGTGGGCAAGGATTCCACCCCCAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429390 34 - 91754291 CCACGTCAGGTGGGCAAGGATTCCTCCCCCGAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947078 34 - 74750902 CCAATTCAGACGGGCAACGATTCCTCCCCCAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65442222 33 - 98207768 CCACTTCAGAATGGCAGTGATTTCT-CTCCAAAC i mm10.chr16 C 0 C 0 e canFam3.chr33 29077843 864 + 31377067 I a score=24769.000000 s hg38.chr3_KI270935v1_alt 136103 8 + 197351 CCCCTCGC s panTro4.chr3_GL389630_random 99443 8 + 103936 CCCCTCGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795166 8 + 202140232 CCCCTCGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890663 8 + 123690457 CCCCTCGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46175 8 + 111706 CCCATTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81284 8 + 192460366 CCCATTGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76508 8 - 187378091 CCCATTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429424 8 - 91754291 CCCATTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947112 8 - 74750902 CCCATCAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65442255 8 - 98207768 CACCTTGC i mm10.chr16 C 0 I 779 s canFam3.chr33 29078707 8 + 31377067 cccatgat i canFam3.chr33 I 864 C 0 a score=891513.000000 s hg38.chr3_KI270935v1_alt 136111 271 + 197351 TTGACTTAGCGTCTGCTTCTGACGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccattgggGCCTC-------TGGAC-------T-----GAGTCATGGAGAA-GGCGCCattgtttgcctcttgacgcttgtctttctacccgcatgaaagctctttgagagaaaacacagttggtctttttcctt----------tgtttctggctg s panTro4.chr3_GL389630_random 99451 271 + 103936 TTGACTTAGCGTCTGCTTCTGACGACCAAACGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcaacctat-cacattttggaaactattatttctttcccattgggGCCTC-------TGGAC-------T-----GAGTCATGGAGAA-GGCGCCattgtttgcctcttgacgcttgtctttctacccgcatgaaagctctttgagagaaaacacagttggtctttttcctt----------tgtttctggctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795174 278 + 202140232 TTGACTTAGCGTCTGCTTCTGATGACCAAATGTGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aagcctaaaatgtccttcgtcctat-cacattttggaaattgttatttctttcccattgggGCCTC-------TGGAC-------T-----GAGTCATGGAGAAgggcaccatcgtttgcctcttgacgtttgtctttctacccacatgaaagctctttgagcgaaaacacagttggtctttttcctt----tgaaaatgtttccggccg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890671 277 + 123690457 TTGACTTAGCGTCTGCTTCTGATGACCAAACATGGTtgccacagaacaaatagaactggatttacacttcacagttcacgtggctggtttct----aaggctaaaatgtccttcgtcctat-cacattttggaaactattatttctttcccattgggGCCTC-------TGGCC-------T-----GAGTCATGGAGAA-GGCACCAtcatttgcctcttgacgcttgtctttctacccacgtgaaagctctttgagagaaaacacagttggtctttttcctt----tgaaaatgtttctggcca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46183 274 + 111706 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacatggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccattgggGCCTC-------TGGAC-------T-----GAGTC--GGAGAA-GGCGCCATCGTCtgcctcttgacacttgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccgtt---ttaaaatgtttctggctg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81292 274 + 192460366 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacatggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccactgggGCCTC-------TGGAC-------T-----GAGTC--GGAGAA-GGCGtcatcgtctgcctcttgacacttgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccttt---ttaaaatgtttctggctg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76516 274 - 187378091 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTTGCCACAGAACAAATAGAACTGGATTTATACTTCACAATTCACGTGGCTGGTTTCT----AAGGCTAAACTGTCCTTTATCCTAT-CACATTTTGGAAACTATTGTTTCTTTCCCATTGGGGCCTC-------TGGAC-------T-----GAGTC--GGAGAA-GGTGCCATCGTCTGCCTCTTGACACTTGTCTTTCTACCCACATGAAAGCTCTTTGAGAGTAAACATAGTTGATCTTTTTCcgtt---ttaaaatgtttctggcTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429432 274 - 91754291 TTGACTTAGCGTCTGTTTCT--TTACCAAAAGTGGTtgccacagaacaaatagaactggatttatacttcacaattcacgtggctgggttct----aaggctaaactgtcctttatcctat-cacattttggaaactattgtttctttcccattgggGCCTC-------TGGAC-------T-----GAGTC--GGAGAA-GGCGCCATCGTCtgcctcttgacacttgtctttctacccacatgaaagctctttgagagtaaacatagttgatctttttccatt---ttaaaatgtttctggctg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947120 266 - 74750902 -TGATTTAGCACCTGTTTCTGATTACCAGACGTGGTTGCCAGAGAACAAATAGAAGTGGATTTACACTTCGCAACTCACGGGGCT-GCTGCC----AGGGTGAAAATGTCCTTTGTCCTAT-CACATTTTGGAAACTG--ATTTCTTTCCCATTGCGGCCGC-------TGGAC-------GTGACAGAGTCATGGAGCA-GGTGCCATCgtttgcc-------------ccttttacctgcatgaaagctctttgagagcaaacatagttggtctttttccttt---taaaaatgtttctggctg i calJac3.chr17 C 0 C 0 s mm10.chr16 65443042 290 - 98207768 CTGACCCAACTTACGTGCCTGATTGCCAAACTTCTTTGTCCCAGATCAACTAGACCTGGACTCACACTT--GCATCTGCCTGACTGACCTCTTCCGAAGGCTAGCATGCCCTTTTCTCCAT-CACATTTTGGAAGCTGACATTTCTTTCCTGTTGGAACCTCTCTATATTAGAC-------T-----GAGTCTCAGAGGA-AGCCCCACAGTTTGCCTCTGGACACTAGGGTCTCCACCATAGTGAATGCTTGTTGAGAGCCAACATAGCTGGCCTTCATCCTCTTTCTCtccatttttctgtcag i mm10.chr16 I 779 C 0 s canFam3.chr33 29078715 260 + 31377067 ttgacttagctgctgtttcg------cagaagtgtttgtcgcagaacaaatagcac---gtttatgtttcaccatctgcgtggctgatgtcT----AACGCTAAACCGTCCTTCGTTCTATGCACATTTGGGGAACTGTAATTTCTTTCCTCTTGGGGCTTC-------CGGACAATAGATT-----GAGTCACGTCCAT-GG----------GGCCTCCTGATACTGAAGCACCGGCATTCCTAACAGCTATTTGAGAGCAAACGTAGGCAGTCTGCTCCTTT----------TGTttttctttt i canFam3.chr33 C 0 I 187 a score=288052.000000 s hg38.chr3_KI270935v1_alt 136382 113 + 197351 ttagcacggtgtccagcacacggcaggtgcccagtaaatgatgac--aatgaacgTGAGACCTCCGGGCCTCTTCTTGGTGGAttctctctttttgagatggagtctcactctgt s panTro4.chr3_GL389630_random 99722 113 + 103936 ttagcacggtgtccagcacacggcaggtgcccagtaaatgatgac--aatgaacgTGAGACCTCCGGGCCTCTTCTTGGTAGAttctctctttttgagatggagtctcactctgt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795452 113 + 202140232 ttagcacagtgtccagcacacggcaggtgcccagtaaatgatgac--aatgaacgTGAGACTTCCGGGCCTCTTCTTGGTAGAttctctctttttgagatggagtcttgctctgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120890948 111 + 123690457 ttagca--gtgtccagcacacggcaggtgcccaataattgatgac--aatgaatgTGAGACCTCCGGGCCTCTTCCTGGTAGAttctctctttctgagacggagtctcactctgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46457 104 + 111706 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat--gatgaatgT---------CGGCCTCTCCTTCGTAGAttctctctttctgagatggagtctcgctctgt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81566 104 + 192460366 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat--gatgaatgT---------CGGCCTCTCCTTCGTAGAttctctctttctgagatggagtctcgctctgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76790 104 - 187378091 TTAGCACAGTGtccagcacacagcaggtgcccagtaaatgatgat--gatgaatgt---------CGGCCTCTCCTTCGTAGATTCTCtctttctgaaatggagtctcgctctgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429706 104 - 91754291 ttagcacagtgtccagcacacagcaggtgcccagtaaatgatgat--gatgaatgT---------CGGCCTTTCCTTCGTAGAttctctctttctgagatggagtctcgctctgt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947386 109 - 74750902 ttagcatagtgtctaccacacggcaggtgctcaatcaatgatgat--aatgaatgTCAGACCTCTGGAC----TCTTGGTAGAttctctctttttgagatagagtcctgctctgt i calJac3.chr17 C 0 C 0 s mm10.chr16 65443332 64 - 98207768 ttaacctaccatctggcagatagtaaatgctcaataaatgttgaccgagtaaatgC---------CAGCCCTT------------------------------------------ i mm10.chr16 C 0 C 0 e canFam3.chr33 29078975 187 + 31377067 I a score=213609.000000 s hg38.chr3_KI270935v1_alt 136495 76 + 197351 cacccaggctggagtgcagtggcgcgatctcggctcgctgcaacctccacctcccaggttcaaacaattctcctgc s panTro4.chr3_GL389630_random 99835 76 + 103936 cacccaggctggagagcagtggcgcgatctcggctcgctgcaaactccacctcccaggttcaaacaattctcctgc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795565 76 + 202140232 cacccaggctggagtgcagtggtgcgatctcggctcgctgcaacctccacctcccaggttcaaacaattctcctgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120891059 76 + 123690457 cacccaggctggagtgcagtggcgtgatctcggctcgctgcaacctccacctcccaggttcaaacaattctcctgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46561 76 + 111706 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacctcccgggttcaaacgattctgctgc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81670 76 + 192460366 cacccaggcgggagtgcagtggagcgatctcggctcgctgcaacctccacctcccgggttcaaacgattctcctgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76894 76 - 187378091 cacccaggtgggagtgcagtggagcgatcttggcttgctgcaacctccacctcccgggttcaaacgattctcctgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429810 76 - 91754291 cacccaggcgggagtgcagtggagtgatctcggctcgctgcaacctccaccttccgggttcaaacgattctccttc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947495 75 - 74750902 catccaggctggagtgcagtaatgtgatctcggctcactgcaacctcc-tctcccaggttcaaaagattgtcctgc i calJac3.chr17 C 0 C 0 s mm10.chr16 65443396 15 - 98207768 --------------TGCAATG-----------------------------------------------TCTCCTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 29079162 62 + 31377067 cgccctgggtggaaggcag------gcgctcagc-cactgag-------ccccccgggcgccccCATTCCTCCCCT i canFam3.chr33 I 187 C 0 a score=498395.000000 s hg38.chr3_KI270935v1_alt 136571 188 + 197351 ctcaacctattgagtagctggaattacaggtgtgcaccacaacgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtctcgaactcctgatctcaagtgatccgcccacctcagcctcccaaaatgctgggattacaggtgtgagccatggcg-cccagccGG s panTro4.chr3_GL389630_random 99911 188 + 103936 ctcagcctcttgagtagctggaattacaggtgtgcgccacaacgtctggctaatttttgtatttttagtagagacagaatttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtgagccatggcg-cccagcTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795641 188 + 202140232 ctcagcctcttgagtagctggagttacaggtgtgcgccacaatgcccggctaatttttgtatttttaatagagacgaggtttcacgatgttggccaggctggtctcgaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgagattacaggtgtgagccacggcg-cccagccGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120891135 188 + 123690457 ctcagcctcttgagtagctggaattacaggtgtgcgccacaacgcccagctaatttttgtatttttactagagacagaatttcaccatgctggccaggctggtctcgaactcctgacctcaagtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccacggcg-cccagccAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46637 189 + 111706 ctcagcctctcgagtagctggaattacaggtgtgcgctacaatgactggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggatcacaggcgtgagccaccgcaccccggccGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81746 189 + 192460366 ctcagcctctcgagtagctggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacaggcgtgagccaccacaccccggccGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 76970 188 - 187378091 ctcagcctctcgagtaactggaattacaggtgtgcgctacaatgcctggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggctggtctcaaactcctgacctcaggtgatccacccacctcggcctcccaaagtgctgggatcacaggcgtgagccactgcg-cccggccgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 429886 188 - 91754291 ctcagcgtctcgagtagctggaattacaggtgtgcgctacgatgcccggctaatttttgtgtatttagtagagacagagtttcaccatgttgcccaggcgggtctcaaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggatcacaggcgtgagccactgcg-cccggccGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947570 179 - 74750902 ctcagcctgctgagtagctgggattacaggtgtgcaccacaacgcctggctaatttgtgtgtttttagcag-------gtttcaccctgttgcccaggctggtctcgaactcctgacctcaagtgatctg-ccacctcgacctcccaaagtgccgggattacaggcatgaaccatcttg-cccAAC-AG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29079224 98 + 31377067 -TCCTACTCCTG----GCTCTCAGCACA-GCGTGCAGCACGCAGCA--------------------GGTGGAGACGTGCTTCCGTGACGATGACTGCACG----TCAGGCTCCTG-----------------------GACCTCC-----TGTTGG--------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65443411 0 - 98207768 C a score=230466.000000 s hg38.chr3_KI270935v1_alt 136759 67 + 197351 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT s panTro4.chr3_GL389630_random 100099 67 + 103936 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795829 67 + 202140232 TAGATTTTCTTAAAGGATCTCACCTAGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120891323 67 + 123690457 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACTT-GGA-GTATTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46826 67 + 111706 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 81935 67 + 192460366 TAGATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 77158 67 - 187378091 tagATTTTCTTAAAGGATCTCACCTGGGTTCTCATTCCTGCTCTGG-ACAGGACACtt-gga-gaattgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 430074 67 - 91754291 TAGATTTTCTTAAAGGAGCTCACCTGGGTTCTCATTCCTGCTCTGG-GCAGGACACTT-GGA-GAATTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 947749 68 - 74750902 TAGATTTTCTTAAGGGATCTCCCCTGGGTTCTCATTCCAGCTCTGG-ACAGGACACTTGGGA-GTACTGT i calJac3.chr17 C 0 I 240 s mm10.chr16 65443411 56 - 98207768 TAGATATCTTTAA-------------GGATCTTACTCCAGCTCTGGAATTGGGTATTT-ATATGTGTTAT i mm10.chr16 C 0 C 0 s canFam3.chr33 29079322 64 + 31377067 TAGGGTCCCTTCTGGGATCTCACCCGGACGCCC--TCCAGCTCCGC-TC-GGCCACCT-GGA-GTAGCGG i canFam3.chr33 C 0 C 0 a score=1540152.000000 s hg38.chr3_KI270935v1_alt 136826 458 + 197351 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTCAC--TTCCAGGATCTGGGCCCCCC------GAGAGCCCTCTTGGGCTGGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCTGGGTG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGGCCGTGATGTTAGGGAGGTGCCCTCTAGGACTGCGATGGTGTATGGGCTGGA-----------------------------------GGACACGCGAGGGCTTGAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGAC--TCTCAGGCCTCT--GCCGTG s panTro4.chr3_GL389630_random 100166 493 + 103936 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTCAC--TTCCAGGATCTGGGCCCCCC------GAGAGCCCCCTTGGGCTGGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGAACTGTGTGGGGGAGGCCCTTCAGGATGGCCGTGATGTTAGGGAGGTGCCCTCTAGGACTGCGATGGTGTATGGGCTGGAGGACACACGAGGACTGTGATGGTGTATGGGCTGGGGGACACGCGAGGGCTTGAGGCCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGAC--TCTCAGGCCTCT--GCCGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199795896 476 + 202140232 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTTAC--TTCCAGGATCTGGGCTCCCC------GAGAGCCCTCTTGGGCTGGT-TCATCTGAGGGAGGAGATG-TAGCCCCCTCCCTCAGAGGGGCTGTGCACAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCTGGGCGAATGCCACATCCCACCTAGACCTATAGGACATTGGACTGTGTGGGGGAGGCCCTTCAGAATGGCCGTGATGTTAGGGAGGTGCCCTCTAGGACTGCGATGGTGTATGGGCTGGA-----------------------------------GGACACGCGAGGGCTTGGGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACCTCTCCCACACTGGCTGGGACATCAGTGGGCCGTTTTCGAAATAGCCATCTCCACTGCAAG-AAAGGAGAGAC--TCTCAGGCCTCT--GCCATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120891390 456 + 123690457 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCGGTCCTCAC--TT-CAGGATCTGGGCCCCCC------GAGAGCCCTCTTGGGTTGGT-TCATCTGAGGCAGGAGATGTTAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTGCCAGCTGCTCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGGAC--TGTGGGGGAGGCCCTTCAGGATGGCAGTGATGTTAGTGAGGTGCCCTCTAGGACTGCGATGGTGTATGGGCTGGA-----------------------------------GGACACACGAGGGCTTGAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTGAGTTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACGCTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-AAAGGAGAGAC--GCTCAGGCCCCT--GCCGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 46893 461 + 111706 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTCAC--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTTGGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGCCCTCTAGGACTGCGGTGGTGTGTGGGCTGGA-----------------------------------GGACACACGAGGGCTTGAGGCCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAACGAGAGACTGTCTCAGGCCTCC--GTCATG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 82002 461 + 192460366 CTGAACTGCCCATTCA-AATCTCACCTCCCACAA-GACCCTGTCCTCAC--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTTGGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGCCCTCTAGGACTGCGGTGGTGTGTGGGCTGGA-----------------------------------GGACACACGAGGGCTTGAGGCCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-AAAGCAGAGACTCTCTCAGGCCTCC--GTCATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 77225 461 - 187378091 ctgaactgcCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTCAT--TTCTGGGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTTGGT-TCATCTGAGGGAGAAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGACGGTGGTGACGTTAGGGAGCGGCCCTCTAGGACTGCGGTGGTGTGTGGGCTGGA-----------------------------------GGACACACGAGGGCTTGAGACCAGCTCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCGTCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTCATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 430141 460 - 91754291 CTGAACTGCCCATTCA-AATCCCACCTCCCACAA-GACCCTGTCCTCAC--TTCTGCGATCTGGGCCCCCCT-----GAGAGCCCTCTTGGGTTGGT-TCATCTGAGGGAGAAGACG-TAG-CCCCTCT-----------------GAGACGGTGCTGTGTCCAGGGGTGCAGGAGGTACCAGCGGCCCCCTGGGCG-GTGCCACATCCCACCTAGACCTGTAGGAGGTTGGACTGTGCAGGGGAGGCCCTTCAGGATGGTGGTGACGTTAGGGAGCGGCCCTCTAGGACTGCGGTGGTGTGTGGGCTGGA-----------------------------------GGACACACGAGGGCTTGAGACCAGCGCAGGGGTGATAAGGTGGCACTTTTACCTGAGCTGGAATTCAGGAATCTATCAGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCGAAATAGCCATCTCCACTGCAGG-GAAGGAGAGACTCTCTCAGGCCTCT--GTCATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 948057 459 - 74750902 CCATTCTACCCATTTA-CATCCCACCTCCCACAA-GGCCCTGTCTTCAC--TTCCAGGAGCTGGACCCCCC------GAGAGCCCTCTTGGGTTGGT-ACATCCGAGGGAGGAGATG-TAGCCCCCTCT-----------------GAGACTGTGCTGTGTCCAGGGGTGCAGAAGATGCCAGCTGCTCCCTGGGCA-GTGCCATGTCCCACTTAGACCTGTAGGAGGTTGGACTGTGTGGGGGACACCCTTCAAGATGGTGGTGATGCCCGGGAGCTGCCCTCTAGGACTGTGATGGCATATGGGCTGGA-----------------------------------GGACAAACCAGGGCTTGAGACCAGCTCAGGTGTGATAAGGTGGCACTTTTACCTAAGTTGGAATTCAGGAGCCTGTCGGGGCGATACTTCTCCCACACTGGCTGGGACATCAGTGGGCTGTTTTCAAAATAGCCATCTCCGCTGCAGGCAAAGGAAAGAT--GCTCAGGCCTCT--GCCAGG i calJac3.chr17 I 240 C 0 s mm10.chr16 65443467 428 - 98207768 CCTAACT--CCACACC-TATCTCCCTTCCTGCAGTGACCTTGTCATCCCCACTCCAGGACCAGGGTGCCTACAGATAGACAGACATTCTGGGTTTGTCTCTTCTACAGAATAAGATT-TA-------TA-----------------GGGGCTGAGA-GTATGAAAAGGTCCAGGCAGGATTAACTG-----TGGATG------------------CACCTGTAGGTGGCTGGTTTGTGCA--GGATGCTCTTCGGGGTGATGGAGAGGTTA-----CATCTGTCTAGGACTGTCATGGCATATGGTATAGA-----------------------------------GGGCAAGGGA-AGCCTGAAGCCAGCTCGTATGTGGT-GGGTGGCACTTTTACCTAATTTGGAATTCAGGAATCGATCTGGACGGTACTTCTCCATTGCTGGCCGGAATGTCAGCGGGCTGTTTTCAAAATACCCATCTCCACTGCAGGCAAAGGAAAGAC----TCAGGCCTCTGGGTCACA i mm10.chr16 C 0 C 0 s canFam3.chr33 29079386 434 + 31377067 CCTAACTGCCCACGCATAGCCCCACCTCCTGCGC-GGCCCTGTTGTCAC--CTCCAGGACCCGGCCTCCCC------GAGAGCTGGGTTCGGCTGGT-CCCC-----GGCGGAGACC-TCGCCCCGCCC-----------------AAGA---TGCCCCACCCGAGGGCCCAGAAGGT-CCTGGTGTCCCGGGCGGG-GGGGCAGGTCCT-----GATCATAGTGGAGCCGCCCTGTCCGGGGAC--CCCCGTGGGATGGAGGAGACGCCGGGAGCCGCGGCTCGAGGACCCCCGCGCCGCATGG--CGGA-----------------------------------GGACAGAGGGCATTTAGGGTCCAGC-CAGGTGTGC----GGGGCGCTGTTACCTGTGTGGGTGTTCAGGAGCCGGTCGGGCTGGTACCTCTTCCACGTGGGCCCAGAGGACAGCGCGCTGTGGCCGCAGAGCCCGTCTCCGCTGCGGGCGGGGGAGAAGC-----CAGGCTGTC--GCGGCG i canFam3.chr33 C 0 I 217 a score=567808.000000 s hg38.chr3_KI270935v1_alt 137284 188 + 197351 CACAGGCTCTTGCCTCGCG-GTTGCAAGGCGTCCATTCA-TCCCGCTAGCCGGT-----CAGCAGCTGGTCAACCAGCTAGGCGGG--------CAGTGGGTCAGTGGGTCAGCCAGCCCCCATTG---TCAAGCCCCAGCACTGAGCAGGAGAGGGGACAAGATGGCTGGGCAGAGGT-AGGAGGCTCTAACCGATTCCACAT---CTG s panTro4.chr3_GL389630_random 100659 188 + 103936 CACAGGCTCTTGCCTCGCG-GTTGCAAGGCGTccattca-tcccgctagccggt-----cagcagctggtcaaccagctaggcggg--------cagtgggtcagtgggtcagccagccCCCATCG---TCAAGCCCCAGCACTGAGCAGGAGAGGGGACAAGATGGATGGGCAGAGGT-AGGAGGCTCTAACCGATTCCACAT---CTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796372 188 + 202140232 CACAGGCTCTTGCCTCGTG-GTTGCAAGGCGTCTGTTCA-TCCCTctagccggt-----cagcagctggtcaaccagctaggcagg--------cagtgggtcagtgggtcagccagccCCCATCG---TCGAGCCCCAGCACTGAGCAGGAGAGGGAACAAGATGGATGGGCAGAGGT-GGGAGGCTCTAACCGATTCCACAT---CTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120891846 188 + 123690457 CACAGGCTCTTGCCTCATA-GTTGCAAGGTGTTCGTTCA-TCCCGCTAGCCGGT-----CAGCAGCTGGTCAACCAGCTAGGCAGG--------CAGTGGGTCAGTGGGTCAGCCAGCCCCCATCG---TTGAGCCCCAGCACTGAGCAGGAGAGGGGACAAGACAGATGGGCAGAGGG-AGGAAGCTCTAACCGATTCCACAT---CTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 47354 185 + 111706 CACAGGCTCTTGCCTCGCG-GTTGCAAGGCGTCCATTCA-TCCCGCTGGCCGGT-----CAGCAGCTGGTCAGCCAGCTAGGCGGG--------CAGTGGGTCAGTGGGTCAGCCAACCCCCATTG---TCCAGCCCCAGCACTGAGCAGCAGAGGGGACAAGACGGATGGGCAGAGGT-AGGAGGCTCTAACCAATTCCGCTT------ i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 82463 185 + 192460366 CACAGGCTCTTGCCTCGCG-GTTGCAAGGCGTCCATTCA-TCCCGCTGGCCGGT-----CAGCAGCTGGTCAGCCAGCTAGGCGGG--------CAGTGGGTCAGTGGGTCAGCCAACCCCCATTG---TCGAGCCCCAGCACTGAGCAGCAGAGGGGACAAGACGGATGGGCAGAGGT-AGGAGGCTCTAACCAATTCCGCTT------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 77686 196 - 187378091 CACAGGCTCTTGCCTCGCG-GTTGCAAGGCGTCCATTCA-TCCCGCTGGCCGGT-----CAGCAGCTGGTCAGCCAGCTAGGCGGGcagtgggtcagtgggtcagtgggtcagCCAACCCCCATTG---TCGAGCCCCAGCACTGAGCAGCAGAGGGGACAAGACGGATGGGCAGAGGT-AGGAGGCTCTAACCAATTCCGCTTCTG--- i papAnu2.chr2 C 0 M 1652 s chlSab2.chr15 430601 185 - 91754291 CACAGGCTTTTGCCTCGCG-GTTGCAAGGCGTCCATTCA-TCCCGCTGGCCAGT-----CAGCAGCTGGTCAGCCAGCTAGGCGGG--------CAGTGGGTCAGTGGGTCAGCCAACCCCCATTG---TCGAGCCCCAGCACTGAGCAGCAGAGGGGACGAGACAGATGGGCAGAGGT-AGGAGGCTCTAACCAATTCCGCTT------ i chlSab2.chr15 C 0 C 0 s calJac3.chr17 948516 189 - 74750902 AACAGGCCCTTGCCTCCTG-GTTGCAAGGCAACCATTCACTCCGGCTAGCTGGT-----CAGCAGCTGGCCAACCAGCTAGGCAGT--------CAGTGGGTCAGCTGGTCATCCGACCCCCATTG---TTGAGTCCCAGCACTGAGCAGGAGAGGGGACAAGATGGATGGGCAGAGGT-GGGAGGCTCTAACCGATTCTACAT---CTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65443895 194 - 98207768 CTCAAGCTCTTCGCTCTCATTTTGAAAGCTACTCATTCG-TTGAGTTTGTCAGTCATCCCAGCTCCCGGTCAG-CAGCT-GGTAGC--------CCATGGCTCAGTCAGCTGAGCAGCTCAGATTGAATCACAGTGCCAGTCCCAAGGGGGAGAAGGAAGAGAA--GATGGGTGGGGGTGGGGAGGTTCTGTGTTATCCCACAT---CTC i mm10.chr16 C 0 C 0 e canFam3.chr33 29079820 217 + 31377067 I a score=900230.000000 s hg38.chr3_KI270935v1_alt 137472 400 + 197351 ATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACAGGGGCGTGAAAACAACAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAAGCAGAGGGTTTGGAGCGGGACAGACTCTagggacagtgtattgtgatggttaagacccagtttctggagttaggcagtgatggattcaactgctgatccccccacttactagcttggtgaccacagacaagttactgaccctctctgattctt-agttttcacatctgtataaaagggattacagtggcatctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcagaactgagtgaggccttgatacaacagatgctGCCACTGCTGccaccaccaccaccac s panTro4.chr3_GL389630_random 100847 400 + 103936 ATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACAGGGGCGTGAAAACAACAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAAGCAGAGGGTTTGGAGCGGGACAGACTCTagggacagtgtattgtgatggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccccacttactagcttggtgaccacagacaagttactgaccctctctgattctt-acttttcacatctgtataaaaaggattacagtggcacctacctcactgtattgtgaggattaaatgcagtaacatctgcaaatccctcagaactgagtgaggccttgatacaacagatgctGCCACTGCTGCCAccaccaccaccac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796560 400 + 202140232 ATCGCTAGCTGCAAGAAACTGGCAGGTCCGCTTGGTCATGAGACAGGGGCGTGAAAACAGCAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAAGCAGAGGGTTTGGAGCGGGACAGACTCTagggacagtgtattgtgatggttaagagccagtttctggagttggacagtgatggattcaactgctgatccccacacttactagcttggtgaccacggacaagtcactgaccctctctgattctt-agttttcacatctgtataaaagggattacagtagcacctacctcactgtattgtgaggattaaatgcagtaatatctgcaaatccctcagaattgagtgaggccttgatacaacagatgctGccaccgctgccaccaccaccaccac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892034 400 + 123690457 ATCGCTAGCTGCAAGAAACTGGCAGGTCTGCTTGGTCATGAGACAGGGGCGTGAAAACAACAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAAGAAGCAGAGGGTTTGGAGCAGGACAGACTCTagggacagtgtattatgatggttaagagccagtttctggagttaggcagtgatggattcaactgctgatccccacactttctagcttggtgaccatggacaagttactgaccctctctgattctt-agttttcacatctgtataaaagggattacagtagcacctacctcgctgtattgtgaggattaaatgcagtaccatctgcaaatccctcagaactcagtgaggccttgatacaacagatgctGCCACTGCTGccaccaccaccaccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 47539 389 + 111706 --------CTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGAC--GGGCGTGAAAACAACAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAGGCAGAGGGTTTGGAGCGGGACAGACTCTAGGGacagtgtattgtgatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttactagcttggtgaccacggacaacttactgaccctctctggttctt-agttttcacatctgtgtaaaagggattaaagtagca-cgacctagctgtacggtgaggattcaatgcagtaacatctgcgaatccctcagaactgagtgaggcctcgatacaacaggtgctGCCACTGCTGTcaccaccaccaacac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 82648 389 + 192460366 --------CTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGAC--GGGCGTGAAAACAACAGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAGGCAGAGGGTTTGGAGCGGGACAGACTCTAGGGacagtgtattgtgatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttactagcttggtgaccacggacaacttactgaccctctctggttctt-agttttcacatctgtgtaaaagggattaaagtagca-cgacctagctgtacggtgaggattcaatgcagtaacatctgcgaatccctcagaactgagtgaggcctcgatacaacaggtgctGCCACTGCTGTcaccaccaccaacac i macFas5.chr2 C 0 C 0 s chlSab2.chr15 430786 390 - 91754291 --------CTGCAAGAAACTGGCAGGTCCGCTTGGTCACGAGACAGGGGCATGAAAACA--AGAGTTCAGGCCTCATTTCTGTTTGTTTCCCTTCAACAAGCAGAGGGTTTGGAGCAGGACAGACTCTAGGGacagtgtattgtgatggttaagagccagtttctggagttaggcagtgacggattcaactgctgatccccacacttactagcttggtgatcacggacaacttactgaccctctctgattcttaagttttcacatctgtgtaaaagggattaaagtagca-ctacctagctgtacagtgaggattcaatgcagtaacatctgcgaatccctcagaactgagtgaggcctcgatacaacaggtgctGCCACTGCTGTcaccaccaccaccac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 948705 361 - 74750902 ATCACCAGCTGCAAGGAAGTGGCAGGTCAGCTTGGTCATGAGAT--GGGTGTGGAAACAACAGAGTTCAGGCCTCCTTTCTGTTTGTTTCCCTT----AAACAGAGGGATTGGAGAGGGACAGTCTGTAGGGACAGTGTATTGTGAT-GCTAAGAGCCAGTCTCTGGAGTTAGACAGGGATGGATTCAACTGCTGATCCCCAC------------------------------actgaccgtctctgagtctt-agttttcacgtc-gtgt-agagggattacagtagcacctaccttgcagtattgtggggattaaatgcagtaacacctgcgaatcgctcagaactgagtgGGGCCTCAATACAACAGCTGCTGCCACCACCACCAGCACCATCTCCAT i calJac3.chr17 C 0 C 0 s mm10.chr16 65444089 317 - 98207768 ------ATCAGGGAGACATCAGCAGGCTCACTCAGT-ACACACC--CGGTGTGGAAGCCACAGAGTTGAGGCCAGATTTTCCTTTGTTTCCTCT---------GATGCTATCTA--AGGACATACTACAGGA------------GGTGCTTCCAGGTCAgtttc-ggggtcaggcagtcact--ttcagcccttgat-tctgcacttactaac--------------------ggtgatctggtctgactttgggGGTTTTATATCTGAGTGAAAGAGCCTTCCGTCGTC-----------------TAAGGCTTCAATGCAGTGACATTTGTAAATCTCTCACATCTGAGTGGAGACCACATTGAAGGGC-----------CTACCACCTCCACTGTCAC i mm10.chr16 C 0 C 0 e canFam3.chr33 29079820 217 + 31377067 I e papAnu2.chr2 77882 1652 - 187378091 M a score=5348.000000 s hg38.chr3_KI270935v1_alt 137872 2 + 197351 ca s panTro4.chr3_GL389630_random 101247 2 + 103936 ca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796960 2 + 202140232 ca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892434 2 + 123690457 ca i nomLeu3.chr11 C 0 I 135 s rheMac3.chrUn_JH291127 47928 2 + 111706 ca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 83037 2 + 192460366 ca i macFas5.chr2 C 0 C 0 s chlSab2.chr15 431176 2 - 91754291 ca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949066 2 - 74750902 CA i calJac3.chr17 C 0 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e papAnu2.chr2 77882 1652 - 187378091 M a score=8100.000000 s hg38.chr3_KI270935v1_alt 137874 9 + 197351 tcgccagca s panTro4.chr3_GL389630_random 101249 9 + 103936 tcgccagca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796962 6 + 202140232 ---ccatcg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892571 9 + 123690457 ccaccatca i nomLeu3.chr11 I 135 C 0 s rheMac3.chrUn_JH291127 47930 9 + 111706 acgctacca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 83039 9 + 192460366 acgctacca i macFas5.chr2 C 0 C 0 s chlSab2.chr15 431178 9 - 91754291 acactacca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949068 9 - 74750902 CCGTCTGCA i calJac3.chr17 C 0 I 300 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e papAnu2.chr2 77882 1652 - 187378091 M a score=7393.000000 s hg38.chr3_KI270935v1_alt 137883 5 + 197351 ctacc s panTro4.chr3_GL389630_random 101258 5 + 103936 ctacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796968 5 + 202140232 ccacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892580 5 + 123690457 ccacc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 47939 5 + 111706 ccatc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 83048 5 + 192460366 ccatc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 431187 5 - 91754291 ccatc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I e papAnu2.chr2 77882 1652 - 187378091 M a score=35105.000000 s hg38.chr3_KI270935v1_alt 137888 23 + 197351 accaccaccaccatcatcgtcac s panTro4.chr3_GL389630_random 101263 20 + 103936 accaccaccaccatca---tcac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796973 20 + 202140232 accaacgccaccatca---acac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892585 23 + 123690457 accactaccaccaccatcgccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 47944 23 + 111706 accacctccaccgccaccaccac i rheMac3.chrUn_JH291127 C 0 I 481 s macFas5.chr2 83053 23 + 192460366 accacctccaccgccaccaccac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 79541 23 - 187378091 accaccaccgcctccaccaccac i papAnu2.chr2 M 1652 C 0 s chlSab2.chr15 431192 23 - 91754291 accacctccatcgccaccaccac i chlSab2.chr15 C 0 I 3 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I a score=15424.000000 s hg38.chr3_KI270935v1_alt 137911 8 + 197351 caccaaca s panTro4.chr3_GL389630_random 101283 8 + 103936 caccaaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199796993 8 + 202140232 taccacct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892608 8 + 123690457 caccatca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48448 8 + 111706 caccaata i rheMac3.chrUn_JH291127 I 481 C 0 s macFas5.chr2 83076 8 + 192460366 caccaaca i macFas5.chr2 C 0 M 14732 s papAnu2.chr2 79564 8 - 187378091 caccaaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431218 8 - 91754291 caccaaca i chlSab2.chr15 I 3 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I a score=51713.000000 s hg38.chr3_KI270935v1_alt 137919 45 + 197351 ctaccatcac---------catcaccatcaccaccaccaccaccaacactacca s panTro4.chr3_GL389630_random 101291 45 + 103936 ctaccaccac---------catcaccatcaccaccaccaacactaccaccacca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199797001 45 + 202140232 ccaccaccac---------caccatcgccgccatcaccatcaccaacaccacct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120892616 54 + 123690457 ccaccatcaccattgccaacatcaccatcgccaacatcaccaccaccactacca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48456 42 + 111706 ---ccaccac---------caccaccgccaccaccaccaccaccactaccacca i rheMac3.chrUn_JH291127 C 0 I 3 s papAnu2.chr2 79572 36 - 187378091 ---------c---------taccaccattgccaccaccaccaacactaccacca i papAnu2.chr2 C 0 I 3 s chlSab2.chr15 431226 45 - 91754291 ctaccaacac---------tgccaccatcaccacttccaccaccaccaccacca i chlSab2.chr15 C 0 I 6991 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M a score=111622.000000 s hg38.chr3_KI270935v1_alt 137964 119 + 197351 ccaccatcaccatcaccaccaccatcaccatcaccaccaccatcaccatcaccaccat---cattgccaccaccatcatcaccaccatcaccaccac----ca---ccaccatcaccaccaccaccatc s panTro4.chr3_GL389630_random 101336 122 + 103936 tcaccatcaccaccaccaccatcatcatcaccatcaccaccatcaccatcaccaccaccaacactaccaccaccaccaTCACTGCCACACCCAACAC----TA---CCACCATTGCCACCAccaccatc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 199797046 123 + 202140232 ccaccaccaccatcaccaccaccaacaccacctccaccaccaccatcaccaccaccaa---cactaccacctccaccaccaccaccatcaccatcacaccaca---ccaccatcaccaccaccatcatc i ponAbe2.chr3 C 0 M 30000 s nomLeu3.chr11 120892670 119 + 123690457 ccaccaccaccatcaccaccaccatcaccaccaccaccaccatcaccaccatcgccac---caccaccattgccaacatcaccaccatcgccaccat----ca---ccaccaccaccaccaccaccacc i nomLeu3.chr11 C 0 I 3 s rheMac3.chrUn_JH291127 48501 119 + 111706 ccaccatcaccaccattaccaccatcaccacttccaccaccaccaccaacactaccac---catcagcactaccaccaacaccaacactaccaccat----cg---ccaccactgccaccaccaccact i rheMac3.chrUn_JH291127 I 3 C 0 s papAnu2.chr2 79611 120 - 187378091 ccaccatcaccaccattaccacca--aacacttccaccaccaccaccaacactaccac---catcagcaccaccaccaacaccaacactaccaccat----cgccaccaccaccgccaccaccaccact i papAnu2.chr2 I 3 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I e chlSab2.chr15 431271 6991 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M a score=5208.000000 s hg38.chr3_KI270935v1_alt 138083 8 + 197351 gccaccat s panTro4.chr3_GL389630_random 101458 8 + 103936 accaccac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120892792 8 + 123690457 gccaccat i nomLeu3.chr11 I 3 C 0 s rheMac3.chrUn_JH291127 48620 8 + 111706 gccaacac i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79731 8 - 187378091 gccaacac i papAnu2.chr2 C 0 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I e chlSab2.chr15 431271 6991 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=95987.000000 s hg38.chr3_KI270935v1_alt 138091 119 + 197351 cacccccaacaccaccaccatcaccaccatcaccaccaccat---------------caccaccatcaccaccaccatcgcca---------------------ccaccatcac---caccaccactgccacctccaccgccactaccaccac------------------------------cacca s panTro4.chr3_GL389630_random 101466 128 + 103936 caccaccatcaccaccatcgccaccaccatcatcaccaccat---------aaccaccaccaccatcaccaccaccatcgcca---------------------ccatcacccccaacaccaccatcaccaccaccatcgccaccaccaccac------------------------------catca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120892800 188 + 123690457 caccaccaccaccaccaccatcaccaccatcaccaccaccaccaccatcgccaccatcaccaccattgccaccaccatcgccaccgccaacactaccattgctgccaccaccaccgccatcaccattgccacctccaccaccaccatcgccaccgccactgccgccatcaccgccaccaacatcacca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48628 119 + 111706 taccaccaaaatcaccaccatcaccaccactaccaccatcac---------------cacttccacccccaccactatcagca---------------------ccaccatcaa---caccaaccctatcatcaccgccaccaccaccaacac------------------------------tacca i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79739 119 - 187378091 taccaccaaaatcaccaccatcaccaccactaccaccatcac---------------cacttccaccaccaccactatcagca---------------------ccaccatcaa---caccaacactatcatcaccgccatcaccaccaacac------------------------------tacca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438262 115 - 91754291 caccaccaacactaccaccatcgccaccaccaccaccatcac---------------cactttcaccaccac----atcagca---------------------ccaccatcaa---caccaacactatcatcaccgccaccaccaccaacac------------------------------tacca i chlSab2.chr15 I 6991 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e calJac3.chr17 949077 300 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=45849.000000 s hg38.chr3_KI270935v1_alt 138210 35 + 197351 ccaccaccaccaccaccaccacTATCGCCATCACC s panTro4.chr3_GL389630_random 101594 35 + 103936 ccatcaccaccatcaccatcaccatcaccaccacc i panTro4.chr3_GL389630_random C 0 I 1106 s nomLeu3.chr11 120892988 35 + 123690457 ccaccaccatcaccaccaccacTATCGCCATCACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48747 35 + 111706 ccatcgccaccacgaccaccactatggccatcacc i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79858 35 - 187378091 ccatcgccaccatgaccaccactatggccatcacc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438377 35 - 91754291 ccatcgccaccacgaccaccactatggccatcacc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949377 29 - 74750902 CCACCACCAC-----CCAGCACC-TTTCCATCACC i calJac3.chr17 I 300 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=6797.000000 s hg38.chr3_KI270935v1_alt 138245 7 + 197351 GTCCCCA s nomLeu3.chr11 120893023 7 + 123690457 GTCCGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48782 7 + 111706 aTCTGCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79893 7 - 187378091 atcTGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438412 7 - 91754291 aTCTGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949406 7 - 74750902 GTCTGCA i calJac3.chr17 C 0 C 0 e mm10.chr16 65444406 0 - 98207768 C e canFam3.chr33 29079820 217 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3_GL389630_random 101629 1106 + 103936 I a score=52249.000000 s hg38.chr3_KI270935v1_alt 138252 46 + 197351 GGTGTGGGGTCCGAGCATGGCCCGGGAAGGAGGAAAGCCT-GGAGCA s nomLeu3.chr11 120893030 46 + 123690457 GGTATGGGGTCCGAGCAGAGCTCGGGAAGGAGGAAAGCCT-GGAGCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48789 45 + 111706 GGTGTGGGGTCCGAGCAT-GCTCAGGAAGGAGAGAAGCCT-GGAGCG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79900 45 - 187378091 GGTGTGGGGTCCGAGCAT-GCTCAGGAAGGAGAGAAGCCT-GGAGCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438419 45 - 91754291 GGTGTGGGGTCCAAGCAC-GCTCAGGAAGGAGAGAAGCCT-GGAGCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949413 46 - 74750902 -GTGTGGGGTTTGAGCGCGGTTCGGGGAAGAGGAAAGCCTAGAAACG i calJac3.chr17 C 0 C 0 s mm10.chr16 65444406 34 - 98207768 AGTGTGG------------GTCCAGGACGGAAGGAAGTCT-GCAGCA i mm10.chr16 C 0 C 0 e canFam3.chr33 29079820 217 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3_GL389630_random 101629 1106 + 103936 I a score=913117.000000 s hg38.chr3_KI270935v1_alt 138298 765 + 197351 GCCGCCTGCAGCCCCACCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTGCGTGACACCTTCCTTGGGTGTACCT-GGACCGTGTGAAATTCCT--------AG--AGTTGGGTAATTCCCCTCCTTTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCAGTGTAATCAAAGGGGTAA-CCTGAACACACTC-AATGTAAGAGAAGAC-ATTTGCAGCAATTATCAAGAACAAAAGACAT--------------------------------------------GTGGCCTTCGTACTGATTGCCACACCCCAGCATATGGGAACAGAGATG------------GCGCACTGCTACATCGGAGACAG----CCTCCCAC-----ACACGGGAATCCACATTTCAACCGCCCACAGCCCCGTGCCTCCTC--TCTCCCTTCACCACC----GGCTCCATATAAGCTTTTGGGTGCCCCCTGGATAAGTGGGTAATTCTCAG-------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatctcagtttcctgatctgtagaatggggatgata-------aatagtatctgcctcgtg-gggtggctgtgatcatgacatgcagtaa--tgtacacgaagt-gttagtgtcatcagtcttggctgttattatCA-----CGATATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATGATTACAACT s nomLeu3.chr11 120893076 765 + 123690457 GCCGCCTGCAGCCCCACCCTGGATGCCTGCTGCAGAGTGGGAACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGATGCACCCCTGCGTGACACCTTCCTCGGGTGTACTT-GGACCGTGTGAAATTCCT--------AGGCAGTTGGGGAACTCCCCT---TTCTCCTTCATAGCACACCAAGAAACTAGTGAAAGCAGTGAAATCAAAGGGGTAA-CCTGAACACACTC-AATGTAAGAGAAGACCATTTGCAGCAATTATCAAGAACAAAAGACAT--------------------------------------------GTGGCCTTCGTATTGATTGCCACACCCCAGCATATGGGAACAGAGATG------------GCGCACTGCTGCGTCGGAGACAG----CCTCCCAC-----ACACAGGAATCCACATTTCAACCACCCACAGCCCCGTGCCTCCTC--TCTCCCTTTACCACC----GGCTCCATATAAGCTTTTGGGTGTCCCCTGGATAAGTGGGTAATTCGCAG-------GAAgtcaggaaggcagattctagcctcagatgtctgggttcaaatctccatgttgccacttcccagctctgggactttaggcaaattgctagtctatttgtatctcagtttcctgatctgtagaatggggatggta-------agtagtatctgcctcatg-gagtggctgtgatcatgacatgcaataa--ggtacataaagt-gttagTGTAATCAGTCTTGGCTGTTATTATCA-----CGATATTTGAGAAGGTAAGAGAGGCCAGCTAATGTCAGTG----GAAATCAGGGAAGCCAAAGCTCTGGGCATTATTACAAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 48834 796 + 111706 GCGGCCTGTAGCCCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCTGACACAAGCAGGATGACGCACCCCTGTGTGACACCTTCCTTGGGTGTACTT-GGACCATGTGAAATTCCT--------AGGCAGTTGGGTAATTCCCCTCCTTTCACCTTCACAGCACACCAAGTAACCAGTGAAAGCAGTGTAATCAAAGGGGTAA-CCTGAGCACATTC-AGTGTAGGAGAAGACCATTTGCAGCAATTATCAAGGACAAAAGACatcgcttctcggccttttggctaagatcaagtgaagAACAAGACATGTGGCCTTTGCACTGATTGCCACACACCAGCATATGGG-ACAGAGACG------------GTGCACTGTTGCATCGGAGACGG----CCTCCCAC-----ACACGGAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTCCTC--TCTCCCTTCACCACC----AGCTCCTTATAAGCTTTT-GGTGCCCCCTGG----------AATTCTCAG-------GAAgtcgggaaggcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaattgtcagtctatttgtatctcagtttcctgatctgtagagtggggatgata-------aatcgtatccgcctcatg-gggtggttgtgatcatgacatgcaataa--tgtacgtgaagt-gttagTGTCATCAGTCTTGGCTGTTATTATCA-----TGATATTTGAGAAGGTAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTACAACG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 79945 795 - 187378091 GCGGCCTGTAGCCCCATCCTGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGCTTTTCCT-CCTCCCGAACACAAGCAGGATGACGCACCCCTGTGTGACACCTTCCTC-GGTGTACTT-GGACCATGTGAAATTCCT--------AGGCAGTTGGGTAATTCCCCTCCTTTCACCTTCATAGCACACCAAGTAACCAGTGAAAGCAATGTAATCAAAGGGGTAA-CCTGAGCACACTC-AGTGTAGGAGAAGACCATTTGCAGCAATTATCAAGGACAAAAGAcatcgcttctcggccttttggctaagatcaagtgaagaACACGACATGTCGCCTTTGCACTGATTGCCACACACCAGCATATGGG-ACAGAGACG------------GTGCACTGTTGCATCGGAGACGG----CCTCCCAC-----ACACGGAAATCCATATTTCAACCGCCCACAGCCCCgtgcttcctc--tctcccttcaccACC----AGCTCCTTATAAGCTTTT-GGTGCCCCCTGG----------AATTCTCAG-------GAAGTCGGGAAGGCAGATTCTAGCCTCAGATGTCTGGGTTCAAAT---CACATTGCCACTTCCCAGCTCTGGGACTTTAGGCAAATTGTCAGTCTATTTGtatctcagtttcctgatctgtataGTGGGGATGATA-------AATCGTATCCGCCTCATG-GGGTGGTTGTGATCATGACATGCAATAA--TGTAAGTGAAGT-GTTAGTGTCATCAGTCTTAGCTGTTATTATCA-----TGATATTTGAGAAGATAAGAGAGGCCAGCTAATGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTATTACAACG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438464 796 - 91754291 GCGGCCTGTAGCCCCATCCCGGGTGCCTGCTGCAGAGTGGGGACTCTTGGGcttttcct-cctccctgacacaagcaggatgacgcacccctgtgtgacaccttcctcggatgtactt-ggaccatgtgaaattcct--------aggcagttgggtaattcccctcctttcaccttcatagcacaccaagtaactagtgaaagcagtgtaatcaaaggggtaa-cctGAGCACACTC-AGTGTAGGAGAAGACCATTTGCAGTAATTATCAAGAACGAAAGACatcgcttctcggccttttggctaagatcaagtgaagAACAAAAGACGTGGCCTTTGCACTGATTGCTACACACCAGCATATGAG-ACAGAAACG------------GTGCACTGTTGCGTTGGAGACGG----CCTCCCAC-----ACACGGAAATCCATATTTCAACCGCCCACAGCCCCGTGCCTCCTC--TCTCCCTTCACCACC----AGCTCCTTATAAGCTTTT-GGTGCCCCCTGG----------AATTTTCAG-------GAAgttgggaaggcagattctagcctcagatgtctgggttcaaat---cacattgccacttcccagctctgggactttaggcaaattgtcagtctatttgtatctcagtttcctgatctgtagagtggggatgata-------aatcgtatctgcctcatg-gggtggttgtgatcatgacatgcaataa--tgtacatgaagt-gttagtgtcatcagtcttggctgttattatCA-----TGATATTTGAGAAGGTAAGAGAGGCCAGCTAGTGT-AGTG----GAAATCAGGGAAGCCAAAGCTCTGGGAATTACTACAACG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 949459 761 - 74750902 GCTGCTTGCAGCCCCACCCTGGGTGCC--------------------TGGGCTTTTCCTCCCTCCCTGACACAAGTGGGATGGTGCACCCCTGCGTGGCACCTTCCTCGGGCGTACGT-GGACCATGTGACA-TCCC--------AGGTAGTTGGGCACTTCCACTCCTTACTCCTTCATAGCACACCAAA-AACTAGCGACAGCAGTGTGACTAAAGGGGTGA-CCTGAACACACTT-GTTGTAAGGGAAGAACATGCGCTGCAATGATCAAGAACAAGAGACAT--------------------------------------------GTGACCTTCACACCGACTGCCACACACCAGCCTGTGGGAACAGAAGCAGGGAGCAGAAGTGGGCACCGTCACGTCGGAGAGAG----CCTCCTCCACGAGACAGGGGAATCCACATTCCAACCACCCACGGCCCCCTGCTTCTTC--TCTCCCCTCACCACC----GGCTTCGTTTAAGCTTTCGGGTGCCCCCTGGGTGAGTGAGTAATTCTCAG-------GAAgtcaggaaggcagattctagcctcagacgtctgggttcaaacctccatgttgccacttcccagctctgggacttgaggcaaattgctagtctatttgtagctcagtggcccgatccgtagaatgtggataata-------aatagtgtctgcctcatg-ggg-ggtcgtgagaagcaaatgcaacaa--tgtccacgaagt-gttagtgcaatcagccttgcatgtTGCTATCG-----TGATATCTGAGAAGTTAAGAGAGGCCAGCTGATGTCAGCG----GAAATCAGGGAAGCCAGAGCTCT-GGAATTATTACAAT- i calJac3.chr17 C 0 C 0 s mm10.chr16 65444440 618 - 98207768 GCAGCCT-CACTGCTACTACAGGAGCATGCCCACAGAAAGCGACTCCTGGTCTTTG-CT-CTATAGTCACGCAGGCTAGAGGACAAATACATGCATGATGTC-CAGTTGGGTTTACTGAGGACAGTGTGGAATTGCT--------AGCTGCCTGAGTAATTACATGCTTTCTTCCTTCATTGCACATCAAA-AGTCAGTCAAAGCCATGCTA-------GGCAG-GCCGAACACACCCTAATGTAAAAGAAACCCATCTGTGACAACCACC---------------------------------------------------------------------------------------------------CAGTAACA------------GATCA------------------------TGCCAC------------------------AGCCAGCCACGGCCCT---TCTCCTC--ACCTCCTTC--------------CCATCTAACAACCTGCGT------------------------------------------GGATCACAAATTCCACtctggagggcctgtgttctgatgcccactttgccactttgaaactctctgactttgggcaaatgactcatctgcttgaacctaggtttccttacctataggataagggttttatctgtaggatagttgtCAACTATCGTTGGTGGCTGTGATCACCAAAGAAAACAAACAGTAAATAAA-----TAATGT-ATATGTCGTAATAGGTATAATAAGTGGCTACTAGCTGAGAA----------GTCAGCTAATGTCAGTGGAAAGAAACCAAGGAGGTCAAAGGTTAAAGGACTCCGGTA--- i mm10.chr16 C 0 C 0 s canFam3.chr33 29080037 737 + 31377067 GCCGCGAGGAGCACCCCCC--GGCGCTTCTCTGGGAGGGGAGCCTGCAGCCCCCCACCC-CCTGTGTGACACGGGCCAGGCGGGCCACAC--GGCGGACACCCGCCCAAGGCGTACTC-GGGACGTGCGACAGCCCTCGCGCCCCAGCGAGCCGGCCGATTCCAGCCCTTTGCCCCTCTAAGCGCATCAGAAAGAGAGCGAAGGCGGTGGAATGACGGGGTCAGCCCTGGTCACAAGC--------------------------------CGGGGGTACGGGAC----------------------------------------------GTGCCCTTCACAACCGGTGGCTCACCCGAGC-----GGTGTTGAGACC-------------CGCG-------GTCAGAGACTGAGTCACCCCCAC-----ACACAGGAGTCTGCG----GCGCCCCCGCAGCCCCTTGCCTGCTCTGTCTGCCTTTCCCCCCACCGGACCCCGCCCAAGCCCCC-CGGGTGCCCCGGGTCACAGGCTGGTGCTCAGCCCACCaggggtcacgaaggcagagcttggcctcaaccggcggggggccagttcctgcttggccacctc-cagctctgggacttggggc-aattccagatccattt-tacctccgctttcttatctgtagaatgggca--gta-------aagagtagccccttcatg--ggtggtggtgatgattaaatgaaataa--tgcatattaagtagttagtgtaataaatggtggctattattattattA--CAGTACTTGAGAGGTCGAGAGAGGTTAGCTAAGGACAGTA----GAACTCGGGGAAGTCAACGCTCCGGGAATTATTATAAGG i canFam3.chr33 I 217 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3_GL389630_random 101629 1106 + 103936 I a score=1417928.000000 s hg38.chr3_KI270935v1_alt 139063 672 + 197351 CACGGGGACTGGGATGGGAAAGGGCATGGC-GGACAAATGGGTG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTTCCCGCCTTGCCCC--AGGATGGGA----GTGTGTGTGCAGC-GAAAGCCGACTCT-ACA-CCCCTCCCTGCCAACTGCTCAGTGCTGAC----AGCCCCTCCC-ATCCTACCTAGAGAAGCCCATGAGCACCGGGTTGCCTGAGCGCTGGGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTTATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAC--GCACAGCACCTGTTCCTGGTCTGCCCACAGCAAAGACATGGG-CCCAAAATGCTG---GCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGCGAA-----CGCACTT-------------------------------------ACCACGGTGGATTTGCCTT-TTGGTGAC------TTTCTTCCAGGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG s panTro4.chr3_GL389630_random 102735 672 + 103936 CACGGGGACTGGGATGGGAAAGGGCATGGC-GGACAAATGGGTG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTTCCCGCCTTGCCCC--AGGATGGGA----GTGTGTGTGCAGC-GAAAGCCGACTCT-ACA-CCCCTCCCTGCCAACTGCTCAGTGCTGAC----AGCCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACCGGGTTGCCTGAGCGCTGGGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGC-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTTATGTCCCCCCGCCCGTCCCACAGCCCTGCTCTGACAT--GTACAGCACCTGTTCCTGGTCTGCCCACAGCAAAGGCATGGG-CCCAAAATGCTG---GCAAGTTTTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------ACCACGGTGGATTTGCCTT-TTGGTGAC------TTTCTTCCAGGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTAGATGAGTGTTTGTTAGAGAAAGCTACC-------AGAACCT--GAGATCAG i panTro4.chr3_GL389630_random I 1106 C 0 s nomLeu3.chr11 120893841 714 + 123690457 CACGGGGACTGGGATGGGAAGGGGCATGGC-GGACAAATGGATG---ATCTTGTCATGGGAAGCAGCCAGATGCCTGGCCCCAGTGGTAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTTCACGCCTTGCCCC--AGGATGGGA----GTGTGTGTGCAGC-GAAACCTGACTCT-ACA-CCCCTCCCTGCCATCTACTCAGTGCTGAC----AGCCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACCAGGTTGCCTGAGCGCTGGGCCACGTCCCACTGCATTCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCCGTGGAGAGGATGGCTTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGC-AAACACAGGGATGCCTGTGAGAGATCCGGGGTCTCCTCTCTTATGTCCCCCCACCCATCCCACAGCCCTGCTTGGACAT--GTACAGCAGCTGTTCCTAGTCTGCCCACAGCAAAGGCATGGG-CCCAAAATGCTG---GCAAGTTGTGGGTCAGTGAGGGCAGCTTTCACCCT--GGGTGTGAACTTACCACACTTACCCTGGGTGTGAACTTTTCACCCTGGGTGTGAATCCACCACGGTGGATTTGCCTT-TTGGTGAC------TTTCTTCCAGGAGGGGA-GATAAAGGGTTCTGGGTTACAATT---CAGTTACATCAGTGTTTGTAAGAGAACGCTACC-------AGAACCT--GAGATTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 49630 672 + 111706 CACAGGGACTGGGATGGGAGAGGGCGTGGT-GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCCGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTTCACATCTTG-CCC--AGGGTGGGA----GTGTGTGTGCAGT-GAAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACGAGGTTGCCTGAGCGCTGGGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTCTCCTCTCTTATGTCCACCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCACCTGTTCCTGGTCTGCCCACAGCAAAGGCATGGG-CCCAAAATGCTG---GCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CACACTT-------------------------------------ACCACAGTGGATTTGCCTT-TTGGTGAC------TTTCTTCCAGGAAGGGA-GAGAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGTAAGAGAAAGCTACC-------AGAACCTGAGAGATCAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 80740 673 - 187378091 CACAGGGACTGGGATGGGAGAGGATGTGGT-GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCCGGCCCCAGCGGGAGCTGGAGTCAGCGTGAGTCAGAAGCACCAGCCAGGAGGGTTCACATCTTGCCCC--AGGGTGGGA----GCGTGTGTGCAGT-GAAACCCCACTCT-GCA--CCCTCCCTGCCATCTGCTCAGTGCTGAC----AACCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACGAGGTTGCCTGAGTGCTGGGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCGTCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGgtggaaga-aaacacagggatGCCCGTGAGAGATACGGGGTTTCCTCTCTTATGTCCCCCCGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCACCTGTTCCTGGTCTGCCCACAGCAAAGACATGGG-CCCAAAATGCTG---GCAAGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CACACTT-------------------------------------ACCACGGTGGATTTGCCTT-TTGGTGAC------TTTCTTCCAGGAAGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATGAGTGTTTGTAAGAGAAAGCTACC-------AGAACCTGAGAGATTAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 439260 672 - 91754291 CGCGGGGACTGGGATGGAAGAGGGCGTGGT-GGACAAATGGGTG---TTCTTGTCGTGGGAAGCAGCCAGATGCCCGG-CCCAGCGGGAGCTGGAGTCAGTGTGAGTCAGAAGCACCAGCCAGGAGGGTTCACATCTTGCCCC--AGGGTGGGA----GCGTGTGTGCAGT-GAAACCCCACTCT-GCA--CCCTACCTGCCATCTGCTCAGTGCTGAC----AACCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACGAGGTTGCCTGAGCGCTGGGCCACGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCTGTGGAGAGGATGGCCTGGTAGGTGTTGCTCTGGGGGTGGGTGGAAGA-AAACACAGGGATGCCCGTGAGAGATCCGGGGTTTCCTCTCTTATGTCCCCCTGCCCGTCCCACAGCCCTGCCTGGACAT--GTACAGCACCTGTTCCTGGTCTGCCCACAGCAAAGGCGTGGG-CCCAAAATGCTG---GCATGTTTTGGGTCAATGAGGGCAGCTTTCACCCT--GGGTGTGAA-----CGCACTT-------------------------------------ACCATGGTGGATTTGCCTT-TCAGTGAC------TTTCTTCTGGGAAGGGA-GATAAAGGGTTCTGGGTTCTAATT---CAGTTAGATGAGTGTTTGCAAGAGAAAGCTACC-------AGAACCTGAGAGATTAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 950220 634 - 74750902 GACGGGGACTCAGATGGGAAAGGGAATGAT-GGACAAATGGGTG---ATCTTTTCATGTGAAGCAGC---------------------------AGCCAGAGTGAGTCAGAAGCATCAGCCAGGTGGGTTTATGCCCGG-CCC--AGGATGGGC----ATGTGTGTGCAGT-GAAACCCCGCTCT-GCA--CCCCTCTTGCCATCTGCTCAGTGCGGAC----AGCCCCTCCC-ATCCTACCTGGAGAAGCCCATGAGCACCGGGCTGCCTGCGTGCCGGGCCGCGTCCCACTGCATCCCACCGCTCTGGTAGAGAAACAGGGCATAGGACCTGCTTCCGTCCGTGGAGAGGATGGCCTGGTAGGTGTTGGTCTGGG----------AGC-AAACACAGGGATGCCGGTGAGTGA-CCGGGGTCTCCTCTCTTACGTCCTCCCACCCGTCCCACAGCGCTGCTCTGACGT--GCACATCACCTGTTCCAGGTCTGCCCACAGCAAAGGCATGGGCCCCAAAAGGCGG---GCAAGTTTCTGGTCAGCTAGGGCAGC-ATCACCCT--GGGTGGGAA-----AGCACTT-------------------------------------ACCACGGTGTATTTGCCTT-TTTGTGAC------TATCTTCCAGGAGGGGA-GATAAAGGGTTCTGGGTTATAATT---CAGTTAGATAAGTCTTTATAAGAGGAAGCTACC-------AGAACCTGATCGCTGAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65445058 586 - 98207768 CACAAGTGTTGGAATGGGGACAG---TGCCAGGATGAGTGGGGG---GGTT--TCATCAGGAAGAGCTACAT----------------------ATTCA----------------------AGGA-----------------C--GGGATAGGA----GTGTGAGCAGGGC--ACACTTAGCTCTCGCA-----------------GTCCAGTGCTGACGGCAAGCCCATCCC-GTCTTACCTGGAGAAGCCCATGAGCACCCGGTTGTATGGTTCCTGGGTCACATCCCACCTCATGCCACTGTTCTGGTAGAGAAACAGGGCATAGGACCTGCTCCCATCTGTGGAGAGGATGGCTTGGTAGGTATTGGTCTGGAAGTTGGGGAGAG----ACAAACAGATGTCATTGAGAGATCTGAGGTTTCCTCCCTGGTGTC----------TCCCACACCTCTGAGCAGACACAGGGACGTCACCTATTCCTGGTCCATC-------------TGGG-CTGCACCTGCTGCGTGCTTGCTGTG-----ATTAGAGTAACACTTACCCT--GGGTGCAGA-----AGATCTT-------------------------------------AGCATGCCCTATTTTCCTTCCTTGTAACTTTTTTTTTTTTCAGGGAGAGGA-AATAAAGGGCTGTGGGTTggggctggagagatggctgagtggttaagagcactgactgctcttccaaaggtcct--gagttcaa i mm10.chr16 C 0 I 538 s canFam3.chr33 29080774 652 + 31377067 CATGAGTACTGGGGTGGGAAAGAGAATGGC----CCAGTGGATGGGTATCTTTTCATTTGAAACAGCAAGA-----------AGGGGGGATTGGAGCAGGCGTGGGTCAGAAACGTCAATAAGAAGGATTCATACCCTGTCCCGGGGGATGGGAGGAGGTGTGTGTGCCTCAAAAACCTGACCCT-GCCACCACCTCCCATTACGTGCTCAGCGCTGGC----CGTCCATCCCTGTCCTACCTGGAGAAGCCCATGAGCACCGGGTTGCCTGGGCGCTGGGTCACATCCCACTGCATGCCGCCGCTCTGATAAAGAAACAGGGCGTAGGACCTGCTGCCGTCTGTGGAGAGGATGGCCTGGTAGGTGCTGGTCTGGAGGTTTGTTGAAGACAAACACAGGGATGCCTGTGAGCGATCTGGGGTCTCCTCCCCAATGTCCCATCACCCTCCCCACAACCCTGCCCCGATAC--ACACATCCTCTTTCCCTAGCCTACTCAGAGCAAA--CTTGGG-------ATTGTG--------------------CAGGGCAGCTTTCCCCCCCGGGCTGTCAA-----AGCGTCT-------------------------------------ACCGTGGTGGACCTGCCTTTTTTGTGAC------TTCTGTCCAGGAAGGGGTGATAAAGCGTTCTGGTTTAGGATC---CAGTCAGAAGAGAGTTTGTGTGAGAAAGCCTCA-------GGACTCAGAAAGATTAG i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=797257.000000 s hg38.chr3_KI270935v1_alt 139735 427 + 197351 CCAAGATACCAGAGAGCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCATCTAAACAGCATGGA-------------TGACACTGG-GGTTCACTGAAGGCGCAcac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAGGAAGAACTTGGTGACTACAAGAGCGGGGTCCTCGGAGGGAGGACAGAGGAGATGGTGTGGCGCACCCTGTGCC--CGTTGGATGAGCCTGTGCTTCagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagcggcgtgactctgaacgagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggagcataata s panTro4.chr3_GL389630_random 103407 427 + 103936 CCAAGATACCAGAGAGCTAGAGAGGAGGCTTCATTAGCTCCCGCGCGGATATT--TAAGGACATTGCCCAAATTGTCTCCTCCATCTAAACAGCATGGA-------------TGACACTGG-GGTTCACTGAAGGCGCAcac-----------gttgtccacagtaggtgaccagtgaacttttgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCATAAGGAAGAACTTGGTGACTACAAGAGCGGGGTCCTCGGAGGGAGGACAGAGGAGATGGTGTGGTGCACCCTGTGCC--CGCTGGATGAGCCTGTGCTTaagagccagaggctggagtcagaagaagctccact-caggcctggctttgccatttgccagcggcgtgactctgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggagcataata i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 120894555 427 + 123690457 CCAAGATACCAGAGAGCTAGAGAGGAGGC-TCATTAGCTCCCTTGCGGATAGT--TAAGGACATTGCCCAAATTGTCTCCTCCACCTGAACAGCATGGA-------------TGACACTGG-GGTTCACTGAAGGCGCACAC-----------GTTGTCcacagtaggtgaccagtgagctttcgtcgagtgaatgaaGAAATGAGTGACTTTAGACCAGGCGTAAGGAAGAACTTGGTGACTACAAGAGCGGGGTCCTCGGAGGGAGGACAGAGGAGACAGTGTGGTGTGCCCCGTGCC--CACTGGATGAGCCTGTGCTTaagagccagaggctggagtcagaagaagctccactgcaggcctggctttgccatttgccagcagcgtgactttgaacaagttacttaacctctctaaccattgtcttcctcatctgtaaaatggggatcataata i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 50302 426 + 111706 CCAAGATACCAGAGAGCTAGAGAGGAGGCTTTGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCACCTGAACAGCATGGA-------------TGACACTGG-GGTTCACTGAAGGTGCACAC-----------GTTGTCcacggtaggtgactagtgaacttttgtcaagtgaatgaaGAAatgagtgactttagatcagacataaggaagaacttggtgactacaagagC-GGGTCCTCGGAGGGAGGACAGAGGAGATGGTGTGGTGTGCCCCATGCC--CGTTGGATGAGCCCATGCTTAATGGCCAGAGGCtggagtcagaagaagctccactgcaggcctggcgttgccatttg-cagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggatcagaata i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 81413 427 - 187378091 CCAAGATACCAGAGAGCCAGAGACAAGGCTTCGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCACCTGAACAGCATGGA-------------TGACACTGG-GGTTCGCTGAAGGCGCACAC-----------GTTGTCCATGGTAGGTGACCAGTGAACTTTTGTCaagtgaatgaagaaatgagTGACTTTAGATCAGACATAAGGAAGAACTTGGTGACTACAAGAGC-GGGTCCTCGGAGGGAGGACAGAGGAAATGGTGTGGTGTGCCCCATGCC--CATTGGATGAGCCTGTGCTTAACGGCCAGAGGCTGGAGTCAGAAGAAGCTCCACTGCAGGCCTGGCATTGTCATTTGCCAGGGgcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggatcaGAATA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 439932 426 - 91754291 CCAAGATACCAGAGAGCTAGAGAGGAGGCTTCGTTAGCTCCCTCGCGGATATT--TAAGGACATTGTCCAAATTGTCCCCTCCACCTGAACAGCATGGA-------------TGACACTGG-GGTTCGCTGAAGGCGCACAC-----------GTTGTCCGTGGTAGGTGACCCGTGAACTTTTGTCAGGTGAATGAAGAAatgagtgactttagatcaggcataaggaagaacttggtgactacaagagC-GGGTCCTCGGAGGGAGGACAGGGGAGATGGTGTGCTGTGCCCCATGCC--CATTGGATGAGCCCGTGCTTAACGGCC-GAGGCtggagtcagaagaagctccactgcaggcctggcgttgccattttccagtggcatgactttgagcaagttacttaacctctctaaccattgtcttcctcatctgtaaaatgtggatcagaata i chlSab2.chr15 C 0 C 0 s calJac3.chr17 950854 436 - 74750902 CCAAGATACCAGAGAGCTCGAGAGGGGACTTAATTAGCTGCCTGGGGGACATT--TAAGGACATTGCCCAAATTGTCCCCTCCACCTGAACAGCATGGATGACTGGCTCAGGTGACACTGG-GGTTTGCTGAAGGCACACGC-----------CTTGTCCGCCGGAGGTGACCGGTGAACTTCTGTTGAGTGAATGAAGAAatgagtgactttaggccaggcatgaggaagaactttgtgactacaagagcGGGGTCCGCAGAGGGAGGACAGAGGGGAGGGCGCCAGGAGCCCCATGTCAAAactgaatggctttgtgcttaagagccagaggctggagtcagaagaacctccactgcaggcctggctctgccatctgct----tcgtgac--tgagcaagtta-ttaatctctctgaccacggtcggcctccaccctataatgtggataagaatc i calJac3.chr17 C 0 C 0 s canFam3.chr33 29081426 436 + 31377067 CCACGACCCCAGAGAGCC-GAGA-GAGGCCTACTTAGCTTCCTCTGGGATATTTGTAAGGACATTGTTCAAA-TGTCCCCTCAACCTAAATATCGTGGATGGACCACAGAGGTGGGCCTGGAGGCTCTCTGAAGGCAGATGCCAAGCACTGTGCTTGTACAAAGTAGGAAACCAATGAACTT--GTTGAACCAATGAGGAAACGAGTGACTTTAGACCACACACAGG------------GGCTGTAAGAGCGGAGTCCCCGGGCGGAAGACTGAGGACACTGTGTGCTGTGACC-ATGGC--CACTGGCTGGCTTtgcagctgagagctggagttggaagtcagaa-agcctccattccaagcctggctttgtcactttctagctgggtgaccttgagcagattgtctaacctctctcaccgtcatcctcctcatctctaaaacgtggataataata i canFam3.chr33 C 0 C 0 e mm10.chr16 65445644 538 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=171361.000000 s hg38.chr3_KI270935v1_alt 140162 102 + 197351 ccagactgagccacgtgaaattgtgaatagc----------cagacatttttgacttacaaaaatgccacttgctatgtttcagcctaataatacccggtttgctgggctgc s panTro4.chr3_GL389630_random 103834 102 + 103936 ccagactgagccacgtgaaattgtgaatagc----------cagacatttttgacttacaaaaatgccacttgctatgtttcagcctaaTAATACCCGGTTTGCTGGGCTGC i panTro4.chr3_GL389630_random C 0 N 0 s nomLeu3.chr11 120894982 102 + 123690457 ccagattgagccacatgaaattgcgaatagc----------cagacatttttgacttacaaaaattccacttgctatgtttcagcctaataatacccagtttgctgggctgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 50728 102 + 111706 cctagttgagccacatgaaattcccaagagc----------cagacatttttgacttacaaaaatgccacttgctatgtttcaacctaataatatctggtttgctgggctgc i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 81840 102 - 187378091 CCCAGTTGAGCCACATGAAATTCCCAACAGC----------CAGAcatttttgacttacaaaaaTGCCAGTTGCTATGTTTCAACCTAATAATACCTGGTTTGCTGGGCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 440358 94 - 91754291 cccagttgagccacatgaaattcccaatagc----------cagacatttttgacttacaaaaacgccacttgctatgtttcaacctaataatatccagtt--------tgc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 951290 98 - 74750902 ccagattgagccacgtgaaattgccaatagc----------cagacatttttgacttacagaaatgccacctactgtgtttcaacctaatgacacctggtttgctgag---- i calJac3.chr17 C 0 C 0 s mm10.chr16 65446182 69 - 98207768 CTCGTGTAAGGCATATGAAGTCGTCAGTCAC----------CAGACATTCTTGCCT---GTAAACG-CAGCTGTTGTTTCTGA----------------------------- i mm10.chr16 I 538 C 0 s canFam3.chr33 29081862 87 + 31377067 tcAGGTTGAGCCATCTCAAA-----AATGGCCGGCTACTGGCAGCCACTTCTGACTTACAAAAATTCCATTTCCTATGTTTTAAACCAGTGA-------------------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=652035.000000 s hg38.chr3_KI270935v1_alt 140264 413 + 197351 tgtgaggtcaagtaggcaaagggccgagacaggccgggcccacggtgagtgctcagccaacagtggTGGCAGT-GGGGGGGTGGCGGT--------GGGGGGGCTTGCTATAATTAGCAA-TCTTTCCTAGAGCCAGAGAGGATTTTGGAAGAGTGGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATAGCTCCT-GGGAGCTGCCCAGGGGTCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCACTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCCGTTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCTGGACTAGCAGGCTGTGTTCACCATAGAACGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAAAACAAGCCAACGAGGGTCC s nomLeu3.chr11 120895084 394 + 123690457 agtgaggtcaagtaggcaaagggccgaggcaggccgggcccacggtgagtgctcagccaacagtggTGGCAGT----------------------------GGCTTGCTGTAATTAGCAA-TCTTTCCTAGAGCCAGAGAGGATGTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCTCCC-AGGAGCTGCCCACGGGTCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGAGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGCCCCTGTTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTCCTGGACTAGCAGGCTGTGTCCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAGCCAACGAGGGTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 50830 412 + 111706 ggtgaggtcaagtaggcaaagggctgaggccggccgggcccacagtgagtggtcTGCCAGCAGTGGGAGGAGC---GGGGGTGGCAGT--------GGGTGGGCTTGCTATAATTAGCAA-TCTTTCCTAGAGCCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACCCCCAGATGGCTCCCTGGGAGCTGCCCACGGGTCTACTCACCCCGAGGGTCCACTGGGCAGGATAAGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGTCTGCAGGACTGGCAGCCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAGCCAACGAGGGTCC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 81942 412 - 187378091 GGTGAGGTCAAGTAGGCAAAGGGCTGAGGCCGGCCGGGCCCACAGTGAGTGCTCTGCCAGCAGTGGGAGCAGC--GGGGGGTGGCAGT--------GGGTGGGC-TGCTATAATTAGCAA-TCTTTCCTAGAGCCAGAGAGGATTTTGGAAGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCACATGGCTCCCTGGGAGCTGCCCACGGGTCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCACCATTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCAGGACTGGCAGCCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACAAGCCAACGAGGGTCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 440452 420 - 91754291 ggtgaggtcaagcaggtaaagggctgaggcgggccgggcccacagcgagtgctcCGCCAGCAGTGGGAGCAGC--GGCGGGTGGCAGTGGGTCAGCGGGTGGGC-TGTTGTAATTAGCAA-TCTTTCCTAGAGCCAGAGAGGATTTTGGACGAGTAGCCCCTGCCTAGGATTCTAGGATGTCTGACTCCCAGATGGCTCCCTGGGAGCTGCCCACGGGTCTACTCACCCCGAGGGTCCACTGGGCAGGATAGGCGTGGGCATTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGAAGCCGCCATTGTTTGTGATCTTTCTAATCCAAGACTCGGCCTGCAGGACTGGCAGGCTGCGTTCACCATAGAGCGTCTCGTATTCCTAGGAAAGGAGGGCAGATGAGAACCAGCCAACGAGGGTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 951388 400 - 74750902 ----aggtcaaataggCAAAGGGCCGAGGCAGG------CCACGGTGAGTGCTCGGCCAACAGTGGTGGCGGTAAGCAGGGTG-------------GGGTGGGCTTGCTGTAATTAGCAG-TCTTTCCTAGAGCCAGAGAGGGCTTCGGAAGAGTAGCCTCTGCCTAGAATTTGAGGATGTCTGACTCCCAGATGGTTCCCAGGGAGCTGTCCACGGATCTACTCACCCCGAGGCTCCACTGGGCAGGATAGGCGTGGGCACTGACCCACGTGACCTTTAGGGTCCACCTGGCCTTGTAGTCCCCGTTGTTTGTAATCTTTCTAATCCAAGACTCAGCCTGCAGGACTAGTGGGTTGTGTTCACCGTAGAGCGTCTCATATTCCTTGGAAAGGAGAGCAGATGAGAACAAGCCAACGAGGGTCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65446251 371 - 98207768 ----------------------CGTAAGGCAGGCCTGGCCCACTGTGGGCACTCAGTAGACCATGCTCTCGAG-----------------------GGA------TACTATAAGCAGCAATTTTTTTCTCCAGCCAGGGTGG-TCTTGAAAAGATAGCTCCCACATAGGATAATGGTATGTTCGACTCCCAAAAGGGCCAC-AGGAGCCGTTCCATGATCCACTCACCCCAAAGCTCTCTTGGGCAGTATAGGCAGGAACATTGACCCAGGTGACCTTCAGTGTCCACTTGGCTCTGTAGCCCCAGCTACTTGTGAAATCATTAATCAAAGTCTCCACTTCCCGGATTAGCTGATGGTGTTCATTGTAAAATGTGACATATTCCTAGGAAAGGAAGGTAGGTAAGAACAAGGAAGTGAGGGTCC i mm10.chr16 C 0 I 177 s canFam3.chr33 29081949 310 + 31377067 -----------GTAT---------------------------CGGTGAGTGCTCAGCAAACAG-------GGT-----------------------GGGGGGGA-----------GGCAG---------------------------GGAA-------CCCTGCCTAGGGTTCCAGGACGTATGACTTCCAGATGGTTCGCAGGGAGTTGTCCTTTGGTCCACTCACCCCGAAGGTCCGCCCGGCAGGATAGGCAGGGGCATTGACCCAGGTGACCTTTAGGGTCCACTCGGCTTTGTAGTTCCTGGTGTCAGTGAATTTATTAATCCAAGACTCCACCTGCTGGACTAGCAGGTTGTGTTCACGATAGAGCGTGTCATATTCCTGGGAAAGGAAGGCAGA-GAAGGCAAGCAAATGAGGGTCC i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=8148.000000 s hg38.chr3_KI270935v1_alt 140677 3 + 197351 CAC s nomLeu3.chr11 120895478 3 + 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51242 3 + 111706 CAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82354 3 - 187378091 CAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 440872 3 - 91754291 CAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 951788 3 - 74750902 CAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65446799 3 - 98207768 cac i mm10.chr16 I 177 C 0 s canFam3.chr33 29082259 3 + 31377067 CAC i canFam3.chr33 C 0 I 5 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=362243.000000 s hg38.chr3_KI270935v1_alt 140680 298 + 197351 TCCTACACATGGGC-----------------------------------------------------CCCCCACTTTCTGCCTGAGGACCCTGCCCACTTCA--GCCCACCCA-ATGGCCTGCC----CTCCCCTGTCCCAGGCCTGCATTTTTGCCGTGAGCTTTTCTGAGGTGAAGTTCAATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTGCAGAATGCAGGGTCGTGGCCCAGACGTCCAAGACCTCTGGACTTGAACTCAAGCA--TCTTAGCTCAAACTGGCCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTGCAGCTTCTTGAGAACAGG s nomLeu3.chr11 120895481 300 + 123690457 TCCTACACATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGACCCTGCCCACTTTA--GCCCACCCACATGGCCTGCC----CTCCCCTGTCCCAGGCCTGCATTTTTGCCATGACCTCTTCTGAGGTGAAGTGCAATTCAAACTTGGGCTGCAGGAAGGCCTGCAGTGTGCAGAATGCAGGGTCGTGGCCCAGACGTCCAAGACCTCTGGACTTGAACTCAAGCGTCTCTTAGCTCAAAGTGGCCCAGAGAGCAGAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTGCAGCTCCTTGAGAACAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51245 285 + 111706 TCCCGCACATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCACATGGCCTGCC----CTTCCCTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACATGAAGTTCAATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTGCAGAATGCAGAGTCCTGGCCCAGACGTCCAAGACCTCTGGACTTGAACTCAAGCGTCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTGCAGCTCCTTGAGAACAGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82357 285 - 187378091 TCCCGCACATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCACATGGCCTGCC----CTCCCCTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACATGAAGTTCAATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTGCAGAATGCGGAGTCCTGGCCCAGACGTCCAAGACCTCTGGACTTGAACTCAAGCATCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTGCAGCTCCTTGAGAACAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 440875 285 - 91754291 TCCCGCACATGGA------------------------------------------------------CCCCCACTTTCTGCCTGGGGA-----------------CCCACCCGCATGGCCTGCC----CTCCCCTGTCCCAGGCCTGCATTTTTGCCGTGAGCTCTTCTGACGTGAAGTTCAATTCAAACTCGGGCTGCAGGAAGGCCTGCAGTGTGCAGAATGCAGAGTCCTGGCCCAGACGTCCAAGACCTCTGGACTTGAACTCAAGCGTCTCTTAGCTCAAACTGGCCCAGAGAGCAAAGCCACTCGGGCCCACTTTTACCTCCCCATGCCTAATCTGCAGCTCCTTGAGAACAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 951791 279 - 74750902 TCCCACCCATGGA------------------------------------------------------CTTCC---TTCTGCCTGGGGATCCTGCCCACTTTA--GCCCACCCACATGGCCTACC----CTCCCCTGTCCCAGGCCTGCGTTTTTACCATGAGCTCTTCTGAAGTGAAGTTCAATTCAAACCTGGGCTGCAGGAAGGCCTGCAGCATGTGGGATGCAGGGTCCTGGCCATGACATCCAAGACCTCTGGACTTGAA----------------CTCAAACTGTCCCAGAGGGCAGAGCCACTCGGGCCCTCTTTCACCT-CCCATGCCTAATCTG-AGCTGCTTGAGGACAGG i calJac3.chr17 C 0 I 281 s mm10.chr16 65446802 333 - 98207768 tacaacacaaggaaccatattaaaggctcacagcattagcaggattgaaaattgctgCCCTAAGGGGTCCCCGCTTCCTTCATGGGGATGCTTATCACTTCGTTGCCCAT-------GTCTACCGGTACATCTTTTTCCCAAGTGTGAATTTTTAC---AAACCCTTATGATTTTAAAATCA-----------------AGGAGAATCTGGGACATGTGAACTAGAGGGGCTCTATCCAGAAAGCCAAGCCTTCTGGAATTGAATTGATACATCCCTTAGTTTAAAACAGCTTGCATGGTATGACCATTTGTGTCTACTTTTACATTCCCATGTCTAGCTTGTAACTCCTTAAAGACAGA i mm10.chr16 C 0 C 0 e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=41870.000000 s hg38.chr3_KI270935v1_alt 140978 37 + 197351 CGTGAGTCTCTTCCTC-TTGGAGCCTCCACACTGCCCT s nomLeu3.chr11 120895781 37 + 123690457 CATCAGTCTCTCTCTC-TTGGAGCCTCCACACTGCCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51530 37 + 111706 CATGAGACGCTCCCTC-TTGGAGCCTCTACACTGCCGT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82642 37 - 187378091 CATGAGACTCTCCCTC-TTGGAGCCTCCACGCTGCCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 441160 37 - 91754291 CATGAGACTCTCCCTC-TTGGAGCCTCCACACTGCCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952351 37 - 74750902 CGTGGTTCTCTCCATC-TTGGAGCCTTTACACTGCTCT i calJac3.chr17 I 281 I 413 s mm10.chr16 65447135 38 - 98207768 TGCAGGTCTGTCCATCTTTGAAACCTAGGTAGAGCTTT i mm10.chr16 C 0 C 0 e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=115293.000000 s hg38.chr3_KI270935v1_alt 141015 91 + 197351 GTCCGTGGCAGGGGCACG-----------------------------GTCCACACTTCCTGCAGTAGCTTTCATCACAT--TTCCTCTGATTGGAGTTATTCACCCAGTCCAGGAGCACAGG s nomLeu3.chr11 120895818 93 + 123690457 ATCCGTGGCAGGGGCATG-----------------------------GTCCACACTTCCTGCAGTAGCTTTCATCACATGCTTCCTCTGATTGGAGTTATTCACCCAGTCCAGGAGCACAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51567 122 + 111706 GTCCATGGCAGGGGCATGGTCCACACTTCGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAACTGGAGTTATTCACCCAGTCCAGGAGCACAGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82679 122 - 187378091 GTCCATGGCAGGGGCACAGTCCACACTTGGTCCATGGCAGGCACATCGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTAATTGGAGTTATTCACCCAGTCCAGGAGCACAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 441197 122 - 91754291 GTCCATGGCAGGGGCACGGTCCACACTTCGTCCATGGCAGGCACATGGTCCACACTTCCTGCAGTAGCTTTCATCACGTGCTTCCTCTCATTGGAGTTATTCACCCAGTCCAGGAGCACAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952801 93 - 74750902 GCCCGTGGCAGGGGCACA-----------------------------GTCCACGCTTGCCACAGTGGCTTTCGTCACAGGCTTCCCCTGCTTGGCGTTACTAACCCAGTCCAGGAGCCCAGG i calJac3.chr17 I 413 C 0 s mm10.chr16 65447173 93 - 98207768 GTCAGCGGCAGGCACACA-----------------------------AAATGTATTTGCTATGACAGCCTCTGCTCTGCACGTTCACAGGCTGGCATTATTAACTTAATTCAGGAGTGTTGG i mm10.chr16 C 0 I 20 e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=72614.000000 s hg38.chr3_KI270935v1_alt 141106 63 + 197351 ACGGGCCCT-CTTGACTCACTCTTGTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG s nomLeu3.chr11 120895911 63 + 123690457 ACGGGCCCT-CTTGACTCACTCTTGTTAGGATAGACCCCCTACAGCCTGATTTTATAATCAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51689 63 + 111706 ACAGGCCCT-CTTGACTCACTCTTGTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82801 61 - 187378091 ACAGGCCCT-CTTGACTCACTCTTGTTAGGATAGA-CCCCTACAG-CTGATTTTACAATCAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 441319 63 - 91754291 ACAGGCCCT-CTTGACTCACTCTTGTTAGGATAGACCCCCTACAGCCTGATTTTACAATCAAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952894 64 - 74750902 ACAGGCCCTACTGGACTCCCTCCTGTTAGGATCAATACCCTGCAGCCTGATTTCACAATCAAAT i calJac3.chr17 C 0 C 0 e mm10.chr16 65447266 20 - 98207768 I e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=54361.000000 s hg38.chr3_KI270935v1_alt 141169 40 + 197351 GCTGAATTGTCAGCCCCCATCCCCCGTCACCTGCAGGTCT s nomLeu3.chr11 120895974 39 + 123690457 GCTGAATTGTCAGCCCCCAT-CCCTATCACCTGCAGGTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51752 39 + 111706 GCTGAATTGTCAGCTCCCAT-CCCCATCACCTGCAGGTCT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82862 39 - 187378091 GCTGAATTGTCAGCTCCCAT-CCCCATCACCTGCAGGTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 441382 39 - 91754291 GCTGAATTGTCAGCTCCCAT-CCCCATCACCTGCAGGTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952958 38 - 74750902 GCTGCACTGTTAGCCCCGA--CCCCGACACCTGCAGGTCT i calJac3.chr17 C 0 C 0 s mm10.chr16 65447286 37 - 98207768 GCTGGAC--TCAACCTCTGT-CCCTGTCACCTGCAAGTCC i mm10.chr16 I 20 C 0 e canFam3.chr33 29082262 5 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=753.000000 s hg38.chr3_KI270935v1_alt 141209 2 + 197351 TC s nomLeu3.chr11 120896013 2 + 123690457 TC i nomLeu3.chr11 C 0 I 9967 s chlSab2.chr15 441421 2 - 91754291 TC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65447323 2 - 98207768 TT i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=-829.000000 s hg38.chr3_KI270935v1_alt 141211 1 + 197351 -T s chlSab2.chr15 441423 1 - 91754291 -T i chlSab2.chr15 C 0 C 0 s mm10.chr16 65447325 1 - 98207768 A- i mm10.chr16 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120896015 9967 + 123690457 I a score=360.000000 s hg38.chr3_KI270935v1_alt 141212 5 + 197351 CGTGG s chlSab2.chr15 441424 5 - 91754291 CATGG i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120896015 9967 + 123690457 I a score=21499.000000 s hg38.chr3_KI270935v1_alt 141217 84 + 197351 CCGGGTTGGGGTATTCCTGGTCAGTCTCGCGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGCGGCCGGGTTGGGGTATTCCTGG s nomLeu3.chr11 120905982 84 + 123690457 TTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGG i nomLeu3.chr11 I 9967 C 0 s chlSab2.chr15 441429 84 - 91754291 TTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGG i chlSab2.chr15 C 0 T 4446 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1102.000000 s hg38.chr3_KI270935v1_alt 141301 14 + 197351 TCAGTCTCGCGGCC s nomLeu3.chr11 120906066 14 + 123690457 TCAGTCTCGTGGCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e chlSab2.chr15 441513 4446 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=30515.000000 s hg38.chr3_KI270935v1_alt 141315 116 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTCGTTGGGTTGGGGTATTCCTGGTC s nomLeu3.chr11 120906080 116 + 123690457 GGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTGTTCCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437067 116 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 T 4446 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=8237.000000 s hg38.chr3_KI270935v1_alt 141431 32 + 197351 AGTCTCGCGGCCGGGTTGGGGTATTCCTGGTC s nomLeu3.chr11 120906196 32 + 123690457 AGTCTCGTGGCTGGGTTGGGGTATTCCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437151 32 - 91754291 AGTCTCATGGTTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 T 32 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=6844.000000 s hg38.chr3_KI270935v1_alt 141463 32 + 197351 AGTCTCGCGGCCGGGTTGGGGTATTCCTG-GTC s nomLeu3.chr11 120906228 33 + 123690457 AGTTTCGTGGTTGGGTTGGGATATTCCTGAGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437151 32 - 91754291 AGTCTCATGGTTGGGTTGGGGTATTCCTG-GTC i chlSab2.chr15 T 32 T 116 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=220.000000 s hg38.chr3_KI270935v1_alt 141495 5 + 197351 AGTCT s nomLeu3.chr11 120906261 5 + 123690457 AGCTT i nomLeu3.chr11 C 0 T 10245 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e chlSab2.chr15 437183 116 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=0.000000 s hg38.chr3_KI270935v1_alt 141500 7 + 197351 CGCGGCC e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e chlSab2.chr15 437183 116 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906266 10245 + 123690457 T a score=2577.000000 s hg38.chr3_KI270935v1_alt 141507 32 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGCGGCC s chlSab2.chr15 437067 32 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTT i chlSab2.chr15 T 116 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906266 10245 + 123690457 T a score=2577.000000 s hg38.chr3_KI270935v1_alt 141539 32 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGCGGCC s chlSab2.chr15 437067 32 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTT i chlSab2.chr15 T 32 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906266 10245 + 123690457 T a score=7708.000000 s hg38.chr3_KI270935v1_alt 141571 88 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCCGGGTTGGGGTATTCCTGGTCAGTC s chlSab2.chr15 437067 88 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTC i chlSab2.chr15 T 32 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906266 10245 + 123690457 T a score=1542.000000 s hg38.chr3_KI270935v1_alt 141659 8 + 197351 TCGTGGCC s nomLeu3.chr11 120896021 8 + 123690457 TCGTGGTT i nomLeu3.chr11 T 10245 C 0 s chlSab2.chr15 437155 8 - 91754291 TCATGGTT i chlSab2.chr15 C 0 T 96 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=8237.000000 s hg38.chr3_KI270935v1_alt 141667 32 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGCGGCC s nomLeu3.chr11 120896029 32 + 123690457 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437067 32 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTT i chlSab2.chr15 T 96 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=7993.000000 s hg38.chr3_KI270935v1_alt 141699 32 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGCGGCC s nomLeu3.chr11 120896061 32 + 123690457 GGGCTGGGGTATTCCTGGTCAGTCTCGTGGCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437067 32 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTT i chlSab2.chr15 T 32 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=30965.000000 s hg38.chr3_KI270935v1_alt 141731 116 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTC s nomLeu3.chr11 120896093 116 + 123690457 GGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437067 116 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 T 32 T 96 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=8566.000000 s hg38.chr3_KI270935v1_alt 141847 34 + 197351 AGTCTCGCGGCCGGGTTGGGGTATTCCTGGTCAG s nomLeu3.chr11 120896209 34 + 123690457 AGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437087 34 - 91754291 AGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAG i chlSab2.chr15 T 96 T 64 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=8472.000000 s hg38.chr3_KI270935v1_alt 141881 32 + 197351 TCTCGTGGTTGGGTTGGGGTATTCCTGGTCAG s nomLeu3.chr11 120896243 32 + 123690457 TCTCGTGGCTGGGCTGGGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 32 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCTGGTCAG i chlSab2.chr15 T 64 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=10352.000000 s hg38.chr3_KI270935v1_alt 141913 42 + 197351 TCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGCGGCC s nomLeu3.chr11 120896275 42 + 123690457 TCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 42 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTT i chlSab2.chr15 T 32 T 42 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2119.000000 s hg38.chr3_KI270935v1_alt 141955 22 + 197351 GGGTTGGGGTATTCCTGGTCAG s nomLeu3.chr11 120896317 22 + 123690457 GGGTTGGGGTATTCCTGGTCAG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e chlSab2.chr15 437099 42 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=32419.000000 s hg38.chr3_KI270935v1_alt 141977 126 + 197351 TCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTG-GTC s nomLeu3.chr11 120896339 127 + 123690457 TCTCGTGGCTGGGCTGGGGTATTCCTGGCCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTATTCCTGGTCAGTTTCGTGGTTGGGTTGGGATATTCCTGAGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437057 126 - 91754291 TCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTG-GTC i chlSab2.chr15 T 42 T 32 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=640.000000 s hg38.chr3_KI270935v1_alt 142103 4 + 197351 AGTC s nomLeu3.chr11 120896466 4 + 123690457 AGCT i nomLeu3.chr11 C 0 I 9506 s chlSab2.chr15 437151 4 - 91754291 AGTC i chlSab2.chr15 T 32 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=7814.000000 s hg38.chr3_KI270935v1_alt 142107 28 + 197351 TCGTGGTTGGGTTGGGGTATTCCTGGTC s nomLeu3.chr11 120905976 28 + 123690457 TCGTGGTTGGGTTGGGGTATTCCTGGTC i nomLeu3.chr11 I 9506 C 0 s chlSab2.chr15 437155 28 - 91754291 TCATGGTTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 C 0 T 116 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=911.000000 s hg38.chr3_KI270935v1_alt 142135 12 + 197351 AGTCTCGCGGCC s nomLeu3.chr11 120906004 12 + 123690457 AGTCTCGTGGCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e chlSab2.chr15 437183 116 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=31200.000000 s hg38.chr3_KI270935v1_alt 142147 116 + 197351 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTC s nomLeu3.chr11 120906016 116 + 123690457 GGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGCTGGGGTATTCCTGGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437067 116 - 91754291 GGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTC i chlSab2.chr15 T 116 T 96 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=24252.000000 s hg38.chr3_KI270935v1_alt 142263 92 + 197351 AGTCTCGCGGCCGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGTTGGGTTGGGGTATTCCT s nomLeu3.chr11 120906132 92 + 123690457 AGTCTCGTGGCTGGGTTGGGGTATTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTGTTCCTGGTCAGTCTCGTGGCTGGGTTGGGGTATTCCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437087 92 - 91754291 AGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCTGGTCAGTCTCATGGTTGGGTTGGGGTATTCCT i chlSab2.chr15 T 96 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e canFam3.chr33 29082262 5 + 31377067 I e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2346.000000 s hg38.chr3_KI270935v1_alt 142355 4 + 197351 GGTC s nomLeu3.chr11 120906224 4 + 123690457 GGTC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437179 4 - 91754291 GGTC i chlSab2.chr15 C 0 T 32 s canFam3.chr33 29082267 4 + 31377067 GGTC i canFam3.chr33 I 5 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=-444.000000 s hg38.chr3_KI270935v1_alt 142359 2 + 197351 AG s nomLeu3.chr11 120906228 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 437151 2 - 91754291 AG i chlSab2.chr15 T 32 C 0 s canFam3.chr33 29082271 1 + 31377067 A- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 51791 0 + 111706 C e mm10.chr16 65447326 0 - 98207768 C e calJac3.chr17 952996 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 82901 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=4404.000000 s hg38.chr3_KI270935v1_alt 142361 3 + 197351 TCT s nomLeu3.chr11 120906230 3 + 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51791 3 + 111706 TCT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82901 3 - 187378091 TCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437153 3 - 91754291 TCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 952996 3 - 74750902 TCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29082272 3 + 31377067 CCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65447326 0 - 98207768 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=47518.000000 s hg38.chr3_KI270935v1_alt 142364 24 + 197351 CGTGGTTGGGTTGGGGTACTCCTG s nomLeu3.chr11 120906233 24 + 123690457 CGTGGTTGGGTTGGGATATTCCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51794 24 + 111706 CATGGTTGGGTTGGGGTATTCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82904 24 - 187378091 CATGGTTGGGTTGGGGTATTCCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437156 24 - 91754291 CATGGTTGGGTTGGGGTATTCCTG i chlSab2.chr15 C 0 I 4 s calJac3.chr17 952999 24 - 74750902 CATGATTGGGTTGGGGTATTCCTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65447326 24 - 98207768 CATGGTTGGAGTAGGGTGTTCCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082275 24 + 31377067 CATGGCTGTGAGGGGGGATTCCCG i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1016361.000000 s hg38.chr3_KI270935v1_alt 142388 675 + 197351 AGTCAGCTTAATGTCCCTTGACTGCTTCCT-CCCACACCCATATTTAAGCCTCAGTCCCCTGCTGCAGGG-------GCTGTCACA-----------GCAGCAACTCTGGCAAAGCCTTCCACACAGCTCTTTGTCTCCCCTGCCAGCTGCTGGGGGATCCTGACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCGGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCACATGGGTTTTGTGGTCAGCATTCAGGGAGGGAAG-------------TGGGGAGGAAA-GTCCCAGCCTTGGTCCAGCTCCTCAAAAGCGTGACCCCCAA----------GGGTAGAGCTTTAGAGATGCTAACAACCCCTG-GAAGTCACCTCCTGTGTCCTGT----TTTGGGGAGAGCCCTTTCCATA-TAATCTCACAGA-ATGCTCCGCCC--TCAGGCCATCCCT----------TGCGTCCTCGGGTGGTAGGCTTGGTCCTGTTTCACTGCAGATCCCTGGCTGTGGACCAG-CCCCTCAC-AGGCACACCCCTCTTGGCCA---GTCCCCTGGGCCCCATCCTGAAGTTTGCGACACATTAGGTGGGGCTCAGG s nomLeu3.chr11 120906257 654 + 123690457 AGTCAGCTTAATGTCCCTTGCCTGGTTCCT-CCCACACCCATATTCAAGCCTCAGTCCACTGCTGCAGGG-------GCTGTCACA-----------GCAGCAACTCTGGCAATGCCTTCCACACAGCTCTTTGTCTCCCCTGCCAGCTACTGGGGGATCCTGACTGCC-AGGCTTTGAAAGGGTCACCTGATAAAATGTGGTCCCCCGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTCGCAGTGGGTTGGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTGAGCACACGGGTTTTGTGGTCAGCATTCAGGGAGGGAAG-------------TGGGGAGGAAA-GTCCCAGCCTTGGTCCAGCTCCTCAGAAGCGTG-------A----------GGGTAGAGCTTTAGAGATGCT---AACCCCTG-GAAGTCACCTCCTGTGTCCTGG----CTTGGGGAGAGCCCTTTCCATA-TAATCTCACAGA-GTGCTCC-CCC--TCAGGCCATCCCT----------TGCG---TCGGGTGGTAGGCTTGGTCCTGTTTCACTGCAGATCCCTGGCTGTGGACCAG-CCCCTCAC-AGGCACACCCCTCTTGGCCA---GTGCCCTGGGCCCCATCCTGAAGTTTGTGACACATTAGGTGGG------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 51818 675 + 111706 AGTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATATTTAAGCCTCAGTCCCCTGCTGCAGGG-------GCTGTCACA-----------GCAGCGACTCTGGCAATGCCTTCCACACAGCTCTTTTTCTCCTCTGCCAGCTGCTGCGGGATCCTGACCGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCACACAGGTTTTGTGGTTACCATTCAGGGAGGAAGG-------------TGGGGAGGAAA-GTCCCAGCCTTGGTCCAGCTCCACAGAAGCGTGACCCCCAA----------GGGTAGAGCTTTAGAGGTGCTAACAACCCCGG-GAAGTCACCTCCTGTGTCCTGG----CTTTGGGAGAGCCCTTTCCGTA-TAATCTCACAGA-ATACTCCACCC--TTAAGGCATCCCT----------TGGGTCCTTGGGTGGTCGGCTTGGTCCTGTTTCACTGCAGATCCCCGGCTGTGGACCAG-CCAATCAC-AGACACATCCCTCTTGGCCA---GTCCCCTGGGCCCCATCCTGAAGCTTGTGACACATCATGTGGGGCTCAGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 82928 666 - 187378091 AGTCAGCTTAATATCCCTTGCCAGCTTCCT-CCCACACCCATACTTAAGCCTCAGTCCCCTGCTGCAGAC-------GCTGTCACA-----------GCAGCGACTCTGGCAATGCCTTCCACACAGCTCTGTTTCTCC--------CTGCTGC-GGATCCTGACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAATGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTGTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGGAGTCTGACTCTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCACACAGGTTTTGTGGTTACCATTcagggaggaagg-------------tggggaggaAA-GTCCCAGCCTTGGTCCAGCTCCACAGAAGCGTGACCCCCAA----------GGGTAGAGCTTTAGAGGTGCTAACAACCCCGG-GAAGTCACCTCCTGTGTCCTGG----CTTCAGGAGAGCCCTTTCCATA-TAATCTCACAGA-ATACTCCACCC--TTAAGGCATCCCT----------TGGGTCCTTGGGTGGTCGGCTTGGTCCTGTTTCACTGCAGATCCCCGGCTGTGGACCAG-CCAATCAC-AGACACATCCCTCTTggcca---gtcccctgggccccaTCCTGAAGCTTGTGACGCATCATGTGGGGCTCAGG i papAnu2.chr2 C 0 I 7 s chlSab2.chr15 437184 668 - 91754291 AGTCAGCTTAATATCCCTTGACAGCTTCCT-CCCATACCCATATTTAAGCCTCAGTCCCCTGCTGCAGGG-------GCTGTCACA-----------GCAGCGACTCTGGCAATGCCTTCCACACAGCTCTTTTTCTCCC-------CTGCTGCGGGATCCTGACTGCC-AGGCTTTGAAAGGCTCACCTGATAAAATATGGTCCCCTGACCAGTGGAGAAGTCAGCATCGTCCCAGAACGGAGCCACCAGGGCCACAGGGTCCCAGCCTGTGAAGCCTCTTGGGAGTGGGTTGGGATAGGAGAAAATCTGGTAGTCTGACTGTGGGAAGATGATCTGGCCATTGTCTGTGAACTAAGCATACAGGTTTTGTGGTTACCATTCAAGGAGGAAGG-------------TGGGGAGGAAA-GTCCCAGCCTTGGTCCAGCTCCACAGAAGCGTGATCCCCAA----------GGGTAGAGCTTTAGAGGTGCTAACAACCCCGG-GAAGTCACCTCCTGTGTCCTGG----CTTCGGGAGAGCCCTTTCCATA-TAATCTCACAGA-ATACTCCACCC--TTAAGGCATCCCT----------TGGGTCCTTGGGTGGTCGGCTTGGTCCTGTTTCACTGCAGATCCCCGGCTGTGGACCAG-CCAATCAC-AGACACATCCCTCTTGGCCA---GTCCCCTGGGCCCCATCCTGAAGCTTGTGACACATCATGTGGGGCTCAGG i chlSab2.chr15 I 4 C 0 s calJac3.chr17 953023 645 - 74750902 AGTCAGCTTGATATCCCTTGCCTGCTTCCT-TCCACAGCCATATTTAAGCCTC---------CTG------------GCTGTGGCA-----------GCAGTAACTCTGACAAAGCCTTCCACACAGCTCTTTGCCTCCCCTGCCAGCTGCTGGGGGATCCTGACTGCC-AGGCTTTGAGAGGCTCACCCGGTAAAATACGGTCCCTCGACCGTCGGAGAAATCAGCATCATCCCAGAACGGAGCCACCAGGGCCACAGTCTCCCAGCCTGTGAAGCCTGTTGGGAGCGGGTTTGGGTAGGAGAAAATCTGGTAGTCTGACTCTGGGAAGATGATCTGGCCGTTGTCTGTGAACTGAGCACAAGGGTTTTGT-GTGAGCATTCAGGGAGGGAGG-------------TGGGGAGGAAACGCCCCAGCCTTGGCCCAGCTCCTCAGAAGC-CGACCCCCAGGGGCCTCTCTGGGTGGAGCTTTAGAGA--CTAACAACCCCTG-GAAGTCATCTCCTATGTCCTGA----TTTCAGGAGAGACCTTTCCGTA-T---------------------------GGGCCATCCCT----------TGGGTCCTCAGGTGGTAGGCTTGGTCCTGCTTCAGTACAGACCCCTGGCTGTGGACCAGCCCCCTCAC-AGGCACACCTCTCTTGGCCA---GTCCTCTGGGCCCCATCCTGAAGCTTGTGACACATCAGATGAGGCTCAGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65447350 671 - 98207768 AGTCTATTTAGCATTCTTCCTCAGCTCCCT-CTGCACCCTGTATTTAAACTTCAGTCCCTTTCCATGAAA----------ATCACATTCCATGGGATACAATGACCTTGAT-GTGCTCTTGACATGACCTTGATCCCTCCAGGCAGGATGCTGGGAGTTACTGACTGCCAAGGACTTGAATGACTCACCTGGTAAAATATGGCTCCCCTGGAGCTAGAGAAATCAGCATCAGCCCAGAACGGGGCCACCATGGCCACGCGCTCCCTTCCGGTGAAGCCTCTTTGAGGTGGGTTGGGGTAGGAGAAGACGTCATAGTCTGACTCTGGGAAAATGATCTGACCATTATCTGTAACCTGAGCACAAGGGTTCT-TGGTT-------AGGGAGGGATG-------------AGGGAAGGGTT-ATCCTAGTCTAGGACCAGTTCCTCGGAAGAGCTCCCCTTAAAAGCCCATCTGTGCAGAGGGTTTGAGGTATCAA----CCTTG-ACGGCCCCCTTGTGCACTTTTTAGCCTTCCAGGAGAACTCAAAACTTAGCAACCTCACA-A-ATACTCATCCCTATCAGGACATTCCC-------ACATCAGTCC-AAAATAGTGGGCGGTGTTCGGC----CTGCA---TCCAGGCT-TGCCTCAG-----------AGCAAAGCCTTCTTGGTAAAGTGTTTC----ACCCTTTCTTGAAGCTTGTGACATATCAGATGAGGGTAAAG i mm10.chr16 C 0 C 0 s canFam3.chr33 29082299 714 + 31377067 AGTGTATGTAACAGCCCTGCTCTGTTTCCTCCCCACCCTCATATTTAAACATCACTCTCTGCCCACAGGGAGCCCAGGCTCTGACA-----------GCAGTCACGCTTGC----CCACGTTCACACCTTTGTCTCTCCT-TGCTGGCTGCTGGGAGATCCTGAATGCT-GGACTTTGAAAGGCTCACCTGGTAAAATATGGTCCCCTGGCCACTGGAAAAATCAGCATCGTCCCAGAATGGAGCCACCATGGCCACAGGGTCCCTGCCTGTGAAGCCTCTAAGGGGAGGATTGGGGTAGGAGAAAATCTGGTACTCTGACTCCGGGAAAATGATCTGGCCATTATCTGTGAACTGGGAACACAGAAGTTCTGGTTAGTGTCCagggagggagggagcgggggaggcagggagagaAC-GTCCCAGGCGTGGGCCGGTTCCTCAGAAGTGTGATCCCCAAGGACCTCTCTGGGTGGAACTTTAGGGATGTCAACAACCACTGCCAGGTCGTCCCATTCGTCCCCG----CCTGCTGGGCCACCTTGCTTAG-TCCTCACACAGATGCTCTTCACCT--GCAGGACACTCCTCTGTTTTAAGTCCTTCCTGACAAGGTAGGTTTTGCCCTGCCTCGGCGGCCAACCCCATCCATAGCCGGC-CCCAGCGCGGGGCGGAGCCCTCTGGGTGG---ATCCCCACGGAGCCTTCCTGAAGTCCCAGCAGCATCAGATGGGGCTAAGA i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=3163.000000 s hg38.chr3_KI270935v1_alt 143063 6 + 197351 GAGTGG s rheMac3.chrUn_JH291127 52493 6 + 111706 AGATGG i rheMac3.chrUn_JH291127 C 0 I 1 s chlSab2.chr15 437852 6 - 91754291 AGGTGG i chlSab2.chr15 C 0 I 1 s calJac3.chr17 953668 6 - 74750902 GGGTAG i calJac3.chr17 C 0 I 1 s mm10.chr16 65448021 6 - 98207768 GGGTCA i mm10.chr16 C 0 I 1 s canFam3.chr33 29083013 6 + 31377067 GGATTG i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83594 7 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906911 0 + 123690457 C a score=2346.000000 s hg38.chr3_KI270935v1_alt 143069 6 + 197351 AACCCT-- s rheMac3.chrUn_JH291127 52500 6 + 111706 AACTCT-- i rheMac3.chrUn_JH291127 I 1 I 1 s papAnu2.chr2 83601 6 - 187378091 AACCCT-- i papAnu2.chr2 I 7 I 1 s chlSab2.chr15 437859 6 - 91754291 AACCCT-- i chlSab2.chr15 I 1 T 6584 s calJac3.chr17 953675 6 - 74750902 GACCCC-- i calJac3.chr17 I 1 C 0 s mm10.chr16 65448028 6 - 98207768 TGTCCT-- i mm10.chr16 I 1 I 2 s canFam3.chr33 29083019 6 + 31377067 --CTCCCC i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906911 0 + 123690457 C a score=443.000000 s hg38.chr3_KI270935v1_alt 143075 1 + 197351 C s rheMac3.chrUn_JH291127 52507 1 + 111706 C i rheMac3.chrUn_JH291127 I 1 C 0 s papAnu2.chr2 83608 1 - 187378091 C i papAnu2.chr2 I 1 C 0 s calJac3.chr17 953681 1 - 74750902 C i calJac3.chr17 C 0 C 0 s mm10.chr16 65448036 1 - 98207768 T i mm10.chr16 I 2 C 0 s canFam3.chr33 29083025 1 + 31377067 T i canFam3.chr33 C 0 I 3 e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906911 0 + 123690457 C a score=-1521.000000 s hg38.chr3_KI270935v1_alt 143076 3 + 197351 TCT s rheMac3.chrUn_JH291127 52508 1 + 111706 T-- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83609 3 - 187378091 TCT i papAnu2.chr2 C 0 C 0 s calJac3.chr17 953682 3 - 74750902 TCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65448037 1 - 98207768 T-- i mm10.chr16 C 0 C 0 e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906911 0 + 123690457 C a score=7258.000000 s hg38.chr3_KI270935v1_alt 143079 40 + 197351 CCATCGCTCAGGGGGTGGAGC---------------------------------CCTCCCTCCATCGCTCAGT s nomLeu3.chr11 120906911 35 + 123690457 -----GCTCAGGGGGTGGAGC---------------------------------CCTCCTTCCATCACTCAGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 83612 72 - 187378091 CCATCACTCA-GGAGTGTAGACACTCTCTCTCCATCAGTCACAAGTGTAAACAGCCTATCTCCATCACTCAGG i papAnu2.chr2 C 0 T 90 s calJac3.chr17 953685 39 - 74750902 CCATTTCTCA-GGGGTAGAAA---------------------------------CCTCTCTCCATCAGTCATG i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 52509 0 + 111706 C e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=13453.000000 s hg38.chr3_KI270935v1_alt 143119 35 + 197351 GGGTGGAGCCCTCC--CTCCATCGCTCA-GGGGTGTAG s nomLeu3.chr11 120906946 35 + 123690457 GAGCGGAGCCCTCC--CTCCGTTGTTCA-GGGGTGTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 52509 21 + 111706 ----------------CTCCATCACTCA-GGAGTGTAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83594 37 - 187378091 AGGTGGAAACCCTGCTCTCCATCACTCA-GGAGTGTAG i papAnu2.chr2 T 90 C 0 s calJac3.chr17 953724 36 - 74750902 GGGTGAAGATCTCT--CACCATCACTCATGGGGTGGAA i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=5615.000000 s hg38.chr3_KI270935v1_alt 143154 8 + 197351 ACACCCTC- s panTro4.chr3 199788891 8 + 202329955 ACACCCTC- i panTro4.chr3 N 0 C 0 s nomLeu3.chr11 120906981 8 + 123690457 ACACCCCC- i nomLeu3.chr11 C 0 T 29 s rheMac3.chrUn_JH291127 52530 8 + 111706 ACACCCTC- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83631 8 - 187378091 ACACTCTC- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 953760 7 - 74750902 --ATCCTTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=910.000000 s hg38.chr3_KI270935v1_alt 143162 1 + 197351 T s panTro4.chr3 199788899 1 + 202329955 T i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52538 1 + 111706 T i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83639 1 - 187378091 T i papAnu2.chr2 C 0 C 0 s calJac3.chr17 953767 1 - 74750902 T i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120906989 29 + 123690457 T a score=44811.000000 s hg38.chr3_KI270935v1_alt 143163 52 + 197351 CTCCATCGCTCA-GGGGTGCAGACACCCCATCTCCATCACTTAGGGGGTGGAA s panTro4.chr3 199788900 52 + 202329955 CTCCATCGCTCA-GGGGTGCAGATACCCCATCTCCATCACTTAGGGGGTGGTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120906960 52 + 123690457 CTCCGTTGTTCA-GGGGTGTAGACACCCCCTCTCCATCACTTAGGGGGTGGAA i nomLeu3.chr11 T 29 C 0 s rheMac3.chrUn_JH291127 52539 52 + 111706 CTCCATCAGTCA-CAAGTGTAGACAGCCTATCTCCATCCCTCAGTGGCTGGAG i rheMac3.chrUn_JH291127 C 0 I 81 s papAnu2.chr2 83640 52 - 187378091 CTCCATCAGTCA-CAAGTGTAAACAGCCTATCTCCATCACTCAGGGGGTGGAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 953768 52 - 74750902 CTCCATCACTCAGGGGGTGGAGAT-CTCTGTTTCCATTGCTCAGGGGGTGGAG i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1905.000000 s hg38.chr3_KI270935v1_alt 143215 6 + 197351 CCCTCT s panTro4.chr3 199788952 6 + 202329955 ACCTCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907012 6 + 123690457 ACCTCT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 83692 6 - 187378091 CCCTCT i papAnu2.chr2 C 0 I 72 s calJac3.chr17 953820 4 - 74750902 ACCT-- i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 52591 81 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2354.000000 s hg38.chr3_KI270935v1_alt 143221 13 + 197351 ATCTATTGCTCAG s panTro4.chr3 199788958 13 + 202329955 CTCTATCGCTCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907018 13 + 123690457 CTCCATCGCTGAG i nomLeu3.chr11 C 0 T 42 e rheMac3.chrUn_JH291127 52591 81 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 953824 0 - 74750902 C e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83698 72 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=191.000000 s hg38.chr3_KI270935v1_alt 143234 2 + 197351 CA s panTro4.chr3 199788971 2 + 202329955 CA i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 52591 81 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 953824 0 - 74750902 C e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83698 72 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=1953.000000 s hg38.chr3_KI270935v1_alt 143236 4 + 197351 GGTG s panTro4.chr3 199788973 4 + 202329955 GGTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52672 4 + 111706 GGTA i rheMac3.chrUn_JH291127 I 81 C 0 s papAnu2.chr2 83770 4 - 187378091 GGTG i papAnu2.chr2 I 72 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 953824 0 - 74750902 C e chlSab2.chr15 437865 6584 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=23041.000000 s hg38.chr3_KI270935v1_alt 143240 35 + 197351 TAGACACCCTCTCTCCATCGCTCAG-GGGTGTAGAC s panTro4.chr3 199788977 35 + 202329955 TAGACACCCTCTCCCCATCGTTCAG-GGGTGTAGAC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52676 13 + 111706 TAGACACCCTCTC----------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83774 35 - 187378091 TAGACACCCTCTCTCCATCACTCAG-GGGTGTAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431281 35 - 91754291 TAGACACCCTCTCTCCATCACTCAG-GGGTGTAGAC i chlSab2.chr15 T 6584 C 0 s calJac3.chr17 953824 28 - 74750902 --------CTCTCTCCATCACTCAGAGGGTGGAGAT i calJac3.chr17 C 0 I 30 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=546.000000 s hg38.chr3_KI270935v1_alt 143275 1 + 197351 A s panTro4.chr3 199789012 1 + 202329955 A i panTro4.chr3 C 0 C 0 s papAnu2.chr2 83809 1 - 187378091 A i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431316 1 - 91754291 A i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 52689 0 + 111706 C e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 953852 30 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=4573.000000 s hg38.chr3_KI270935v1_alt 143276 6 + 197351 CCCTCC s panTro4.chr3 199789013 6 + 202329955 CCCTCC i panTro4.chr3 C 0 C 0 s papAnu2.chr2 83810 6 - 187378091 CCCTCT i papAnu2.chr2 C 0 T 118 s chlSab2.chr15 431317 6 - 91754291 CCCTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953882 6 - 74750902 CTCTCT i calJac3.chr17 I 30 C 0 e rheMac3.chrUn_JH291127 52689 0 + 111706 C e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=15451.000000 s hg38.chr3_KI270935v1_alt 143282 18 + 197351 CTTCATCGCTCAGGGGTG s panTro4.chr3 199789019 18 + 202329955 CTCCATCGCTCAGGGGTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52689 15 + 111706 ---CATCACTCAGCGGTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83698 18 - 187378091 CTCCATCACTCAGGGATG i papAnu2.chr2 T 118 C 0 s chlSab2.chr15 431323 18 - 91754291 CTCCATCACTCAGGGGTG i chlSab2.chr15 C 0 T 60 s calJac3.chr17 953888 17 - 74750902 TTCCATGGCTCAGGGGG- i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=33827.000000 s hg38.chr3_KI270935v1_alt 143300 36 + 197351 TAGACACCCTCCCTTCATCGCTCAGGGGTGTAGACA s panTro4.chr3 199789037 36 + 202329955 TAGACACCCTCCCTCCATCGCTCAGGGGTGTAGACA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52704 36 + 111706 TAGACACCCTCTCTCCATCACTCAGCGGTGTAGACA i rheMac3.chrUn_JH291127 C 0 T 149 s papAnu2.chr2 83716 34 - 187378091 TAGACACC--CTCTCCATCACTCAGCGGTGTAGACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431281 36 - 91754291 TAGACACCCTCTCTCCATCACTCAGGGGTGTAGACA i chlSab2.chr15 T 60 C 0 s calJac3.chr17 953905 34 - 74750902 TGGAGACT-TCTCTCCATTGTTCAGGGG-GTGGAGA i calJac3.chr17 C 0 T 87 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=4555.000000 s hg38.chr3_KI270935v1_alt 143336 4 + 197351 CCCT s panTro4.chr3 199789073 4 + 202329955 CCTT i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52591 4 + 111706 CCCT i rheMac3.chrUn_JH291127 T 149 C 0 s papAnu2.chr2 83750 4 - 187378091 CCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431317 4 - 91754291 CCCT i chlSab2.chr15 C 0 I 6545 s calJac3.chr17 953852 4 - 74750902 CTCT i calJac3.chr17 T 87 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=21059.000000 s hg38.chr3_KI270935v1_alt 143340 20 + 197351 CTCTCCATCGCTCA-GGGGTG s panTro4.chr3 199789077 20 + 202329955 CCCTCCATCGCTCA-GGGGTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52595 20 + 111706 GTCTCCATCACTCA-GCGGTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83754 20 - 187378091 CTCTCCATCACTCA-GGGGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437866 20 - 91754291 CTCTCCATCACTCA-GGAGTG i chlSab2.chr15 I 6545 T 6605 s calJac3.chr17 953856 21 - 74750902 CTCTCCATGGCTCAGGGGGTG i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=38585.000000 s hg38.chr3_KI270935v1_alt 143360 45 + 197351 TAGACACCCTCTCTCCATCGCTCAGGGGTGTAGACACCCTCTCTC s panTro4.chr3 199789097 32 + 202329955 TAGACACCCTCTCTCCATCGCTCAGGGGTGTA------------- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52615 45 + 111706 TAGACACCCTCTCTCCATCACTAAGGGGTGTAGACACCCTCTCTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83774 45 - 187378091 TAGACACCCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431281 45 - 91754291 TAGACACCCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTC i chlSab2.chr15 T 6605 I 6601 s calJac3.chr17 953877 42 - 74750902 GAGAT-CTCTCTTTCCATGGCTCAGGGG-GTGGAGA-CTTCTCTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=8517.000000 s hg38.chr3_KI270935v1_alt 143405 35 + 197351 CATCGCTC-AGGGGTGCAGACACCCCATCTCCATCA s rheMac3.chrUn_JH291127 52660 34 + 111706 CATAACTCAGGGGGTATAGACACC--CTCTCCATCA i rheMac3.chrUn_JH291127 C 0 I 150 s papAnu2.chr2 83819 35 - 187378091 CATCACTC-GGGGGTGTAGACACCCTCTCTCCATCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437927 33 - 91754291 CATCACTC-AGGAGTATAGACACC--CTCTCCATCA i chlSab2.chr15 I 6601 T 6451 s calJac3.chr17 953919 8 - 74750902 CATTGTTC---------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789129 0 + 202329955 C a score=7599.000000 s hg38.chr3_KI270935v1_alt 143440 13 + 197351 CTTAGGGGGTGGA s rheMac3.chrUn_JH291127 52844 13 + 111706 CTCAGGGGGTGGA i rheMac3.chrUn_JH291127 I 150 C 0 s papAnu2.chr2 83854 13 - 187378091 CTCAGGGGGTGGA i papAnu2.chr2 C 0 T 176 s chlSab2.chr15 431509 10 - 91754291 CTC---GGGTGGA i chlSab2.chr15 T 6451 C 0 s calJac3.chr17 953927 10 - 74750902 ---AGGGGGTGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789129 0 + 202329955 C a score=205.000000 s hg38.chr3_KI270935v1_alt 143453 1 + 197351 A s rheMac3.chrUn_JH291127 52857 1 + 111706 G i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83691 1 - 187378091 G i papAnu2.chr2 T 176 I 263 s chlSab2.chr15 431519 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953937 1 - 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789129 0 + 202329955 C a score=11054.000000 s hg38.chr3_KI270935v1_alt 143454 31 + 197351 ACCTCTCTCTATCACTCAGCAGGTGTGGACA--- s panTro4.chr3 199789129 4 + 202329955 ---------------------------GACA--- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52858 30 + 111706 CCCTCTCTCCATCACTCTG-GGGTGTAGACA--- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83955 31 - 187378091 ATCTCTCTCCATGGTTCAGCAGGTGTAGACA--- i papAnu2.chr2 I 263 T 294 s chlSab2.chr15 431520 31 - 91754291 ATCTCTTTCCATGGCTCAGCAGGTGTAGACA--- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 953938 34 - 74750902 ATCTCTCTCCATCTCTCGGGGGGTGGAGATTCTT i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=2345.000000 s hg38.chr3_KI270935v1_alt 143485 2 + 197351 CC s panTro4.chr3 199789133 2 + 202329955 CC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52888 2 + 111706 CC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83692 2 - 187378091 CC i papAnu2.chr2 T 294 C 0 s chlSab2.chr15 431551 2 - 91754291 CC i chlSab2.chr15 C 0 I 6407 s calJac3.chr17 953972 2 - 74750902 CT i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=9061.000000 s hg38.chr3_KI270935v1_alt 143487 12 + 197351 CTCTCTCCATCG s panTro4.chr3 199789135 12 + 202329955 CTCTCTCCATCG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52890 12 + 111706 CTCGCTCCAACA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83694 12 - 187378091 CTCTCTCCATCA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 953974 12 - 74750902 CTCTCTCCATCA i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431553 6407 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=23320.000000 s hg38.chr3_KI270935v1_alt 143499 30 + 197351 CTCA-GGGGTGTAGACACCCTCCCTTCATCG s panTro4.chr3 199789147 30 + 202329955 CTCA-GGGGTGTAGACACCCTCCCTTCATCG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52902 28 + 111706 CTCA-GGATTTTAGACACCCTCTC--CATCA i rheMac3.chrUn_JH291127 C 0 T 236 s papAnu2.chr2 83706 28 - 187378091 CTCA-GGGATGTAGACACCCTCTC--CATCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437960 28 - 91754291 CTCA-GGAGTGTAGACACCCTCTC--CATCA i chlSab2.chr15 I 6407 C 0 s calJac3.chr17 953986 28 - 74750902 CTCAGGGGGTGGAGAT-CTCTCTC--CATCT i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=107303.000000 s hg38.chr3_KI270935v1_alt 143529 115 + 197351 CTCAGGGGTGTAGACAT-CCTCTCTCCATCGCTCAGGGGTGTAGACAACCTCTCTCCATCGCTCAGGGGTGTAGACACCCCCTCTCCATCGCTC-AGGGGTGTAGACACCCCCTCTC s panTro4.chr3 199789177 115 + 202329955 CTCAGGGGTGTAGACAC-CCTCTCTCCATCACTCAGGGGTGCAGACACCCCATCTCCATCGCTCAGGGGTGCAGACACCCCATCTCCATCGCTC-AGGGGTGCAGACACCCCATCTC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52694 115 + 111706 CTCAGCGGTGTAGACAC-CCTCTCTCCATCACTCAGCGGTGTAGACAACCTCTCTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATCACTC-AGGGGTGTAGACACCCTCTCTC i rheMac3.chrUn_JH291127 T 236 I 66 s papAnu2.chr2 83734 115 - 187378091 CTCAGCGGTGTAGACAC-CCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCACTC-GGGGGTGTAGACACCCTCTCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 437988 113 - 91754291 ATCAGGAGTGTAGACAC-TCTCTCTCCATCAGTCACAAGTGTAGACAGCCTATCTCCATCACTCAGGGATGTACACACC--CTCTCCATCACTC-AGCGGTGTAGACACCCTCTCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954014 111 - 74750902 CTCAGGGG-GTAGAGATGTCTCTCTCCATCTCTCAGGGGGTGGAGCTGTCTCTCTCCATCACTCAGGGG-GTGGAGATC-TCTCTCCATCACTCAAGGGGTGGAG---CTCTCTCTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=6628.000000 s hg38.chr3_KI270935v1_alt 143644 8 + 197351 CATCGCTC s panTro4.chr3 199789292 8 + 202329955 CATCACTT i panTro4.chr3 C 0 C 0 s papAnu2.chr2 83849 8 - 187378091 CATCACTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438101 8 - 91754291 CATCACTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954125 8 - 74750902 CATCACTC i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 52809 66 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=2999.000000 s hg38.chr3_KI270935v1_alt 143652 5 + 197351 AGGGG s panTro4.chr3 199789300 5 + 202329955 AGCGG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52875 5 + 111706 TGGGG i rheMac3.chrUn_JH291127 I 66 C 0 s papAnu2.chr2 83857 4 - 187378091 -AGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438109 5 - 91754291 AGGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954133 5 - 74750902 AGGGG i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=3312.000000 s hg38.chr3_KI270935v1_alt 143657 6 + 197351 TGTGGA s rheMac3.chrUn_JH291127 52880 6 + 111706 TGTAGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83861 6 - 187378091 GGTGGA i papAnu2.chr2 C 0 T 147 s chlSab2.chr15 438114 6 - 91754291 TATAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954138 5 - 74750902 -GTGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=6642.000000 s hg38.chr3_KI270935v1_alt 143663 29 + 197351 CACCCT--CTCCATCTCTCAGAGGTGTAGAC s rheMac3.chrUn_JH291127 52886 31 + 111706 CACCCTCGCTCCAACACTCAGGATTTTAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83720 29 - 187378091 CACCCT--CTCCATCACTCAGCGGTGTAGAC i papAnu2.chr2 T 147 I 118 s chlSab2.chr15 438120 29 - 91754291 CACCCT--CTCCATCACTCAGCGGTGTAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954143 4 - 74750902 -----------------------GTGT---- i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=51622.000000 s hg38.chr3_KI270935v1_alt 143692 89 + 197351 ACCCCCTCTCCATCGCTCAGGGATGTAGACACCCCCTCTCCATCGCTCAGGGGTGTAGACACCCCCTCTCCATCGCTCAG-GGGTGTAGA s rheMac3.chrUn_JH291127 52917 87 + 111706 --ACCCTCTCCATCACTCAGGTGCGTAGACATCATCTCTACATCACTCAGGGGTGTAGACACCCTCTCTCCATCGCTCGG-GGGTGTAGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83867 89 - 187378091 GCCCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATCACTCGG-GTGTGGAAA i papAnu2.chr2 I 118 C 0 s chlSab2.chr15 438149 87 - 91754291 ACCCTCTCTCCATCACTCAGGGCTATAGACACC--CTCTCCATCACTCAGCGGTGTAGACACCCTCTCTCCATCACTCAG-GGCTATAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954147 85 - 74750902 ---CTCTCTCCATCACTCAGGGG-GTGGAGTGTCTCTCTCCATCACTCAGGGG-GTGGAGTGTCTCTCTCCATCGCTCAGTGGGTGGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=5628.000000 s hg38.chr3_KI270935v1_alt 143781 13 + 197351 CACCCCCTCTCCA s rheMac3.chrUn_JH291127 53004 13 + 111706 CACCCTCTCTCCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83956 10 - 187378091 ---TCTCTCTCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 438236 13 - 91754291 CACCCTCTCTCCA i chlSab2.chr15 C 0 T 6891 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=8658.000000 s hg38.chr3_KI270935v1_alt 143794 21 + 197351 TCGCTCAG-GGGTGTAGACACC s rheMac3.chrUn_JH291127 53017 21 + 111706 TCGCTCGG-GGGTGTAGACACC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83966 22 - 187378091 TGGTTCAGCAGGTGTAGACACC i papAnu2.chr2 C 0 T 118 s chlSab2.chr15 431358 21 - 91754291 TCACTCAG-GGGTGTAGACACC i chlSab2.chr15 T 6891 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=6742.000000 s hg38.chr3_KI270935v1_alt 143815 15 + 197351 CTCCCTTCATCGCTC s rheMac3.chrUn_JH291127 53038 15 + 111706 CTCTCTCCATCGCTC i rheMac3.chrUn_JH291127 C 0 T 244 s papAnu2.chr2 83870 15 - 187378091 CTCTCTCCATCACTC i papAnu2.chr2 T 118 C 0 s chlSab2.chr15 431379 15 - 91754291 CTCTCTCCATAACTC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=573.000000 s hg38.chr3_KI270935v1_alt 143830 2 + 197351 AG s papAnu2.chr2 83885 2 - 187378091 AG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431394 2 - 91754291 AG i chlSab2.chr15 C 0 T 70 e rheMac3.chrUn_JH291127 53053 244 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=975.000000 s hg38.chr3_KI270935v1_alt 143832 30 + 197351 GGGTGCTCAGGGCTATAGACACCCTCCCTT s papAnu2.chr2 83887 20 - 187378091 GGGTG----------TAGACACCCTCTCTC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 53053 244 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e chlSab2.chr15 431396 70 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=10669.000000 s hg38.chr3_KI270935v1_alt 143862 20 + 197351 CATCGCTCAGGGGTGTAGAC s rheMac3.chrUn_JH291127 52809 20 + 111706 CATCACTCAGGGGTGTAGAC i rheMac3.chrUn_JH291127 T 244 I 28 s papAnu2.chr2 83907 20 - 187378091 CATCGCTCGGGGGTGTAGAC i papAnu2.chr2 C 0 T 60 s chlSab2.chr15 431326 20 - 91754291 CATCACTCAGGGGTGTAGAC i chlSab2.chr15 T 70 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=667.000000 s hg38.chr3_KI270935v1_alt 143882 2 + 197351 AC s rheMac3.chrUn_JH291127 52857 2 + 111706 GC i rheMac3.chrUn_JH291127 I 28 C 0 s papAnu2.chr2 83867 2 - 187378091 GC i papAnu2.chr2 T 60 C 0 s chlSab2.chr15 431346 2 - 91754291 AC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954232 0 - 74750902 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=49027.000000 s hg38.chr3_KI270935v1_alt 143884 82 + 197351 CCTCTCTCCATCGCTCAGGGGTGTAGACACCCTCTCTCCATCGCTC-AGGGGTGTAGACACCCTCTCTCCATCGCTCAGGGGT s rheMac3.chrUn_JH291127 52859 80 + 111706 CCTCTCTCCATCACTCTGGGGTGTAGACACCCTCGCTCCAACACTC-AGGATTTTAGACACC--CTCTCCATCACTCAGGTGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83869 82 - 187378091 CCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCGCTC-GGGGGTGTAGACACCCTCTCTCCATCACTCGGGTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431348 81 - 91754291 CCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATAACTCAGGGGGTGTAGACACC--CTCTCCATCACTCAGGGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954232 78 - 74750902 TCTCTCTCCATCACTCAGGGG-GTGGAGA-TCTCTCTCCATCACTCAGGGGGTGGAGTGTCT--CTCTCCATCACTCAGGGG- i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789305 0 + 202329955 C a score=12723.000000 s hg38.chr3_KI270935v1_alt 143966 24 + 197351 GTGGACACCCTCTCTCCATCGCTC s panTro4.chr3 199789305 23 + 202329955 GTGGA-AACCTCTGTCCATCGTTC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52939 24 + 111706 GTAGACATCATCTCTACATCACTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83951 21 - 187378091 G--GAAATC-TCTCTCCATGGTTC i papAnu2.chr2 C 0 T 145 s chlSab2.chr15 431429 24 - 91754291 GTAGACACCCTCTCTCCATAACTC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 954310 23 - 74750902 GTGGAGATC-TCTCTCCATCTCTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=7333.000000 s hg38.chr3_KI270935v1_alt 143990 18 + 197351 AGGGGTGTAGA-----CACCCTC s panTro4.chr3 199789328 14 + 202329955 AGGGGTGTAGA-----CAC---- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52963 14 + 111706 AGGGGTGTAGA-----CAC---- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83827 18 - 187378091 GGGGGTGTAGA-----CACCCTC i papAnu2.chr2 T 145 I 22 s chlSab2.chr15 431454 13 - 91754291 GGGGGTGTAGA-----CA----- i chlSab2.chr15 I 1 C 0 s calJac3.chr17 954333 16 - 74750902 -AGGGTGTGGAGCTCTC------ i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=1854.000000 s hg38.chr3_KI270935v1_alt 144008 51 + 197351 CCTTCATCGCTCAGGGGTGTGGACA-CCCTCTCTATCGTTCGGGGTGTAGAC s calJac3.chr17 954349 51 - 74750902 TCTCCATCACTCACGGG-GTGGAGATCTCTCTCCATCTCTCAGGGGGTGGAG i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 52977 0 + 111706 C e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431467 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83845 22 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789342 0 + 202329955 C a score=64979.000000 s hg38.chr3_KI270935v1_alt 144059 78 + 197351 ATCCTCTCTCCATCGCTCAGGGGTGTAGACACCCCCTCTCCATCGCTC-AGGGGTGTAGACACCCTCTCTCCATCGCTC s panTro4.chr3 199789342 76 + 202329955 --CCTCTCTCCATCGCTCAGGGGTGTAGACACCCCCTCTCCATCACTC-AGGGGTGTAGACACCCTCTCTCCATTGCTC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52977 76 + 111706 --CCTCTCTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATCGCTC-GGGGGTGTAGACACCCTCTCTCCATCGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83867 78 - 187378091 GCCCTCTCTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCGCTC-GGGGGTGTAGACACCCTCTCTCCATCACTC i papAnu2.chr2 I 22 T 100 s chlSab2.chr15 431467 45 - 91754291 ---CCCTCTCCATCGCTCAGGGGTGTAGACACCCTCTCTCCATCGCTC------------------------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954400 73 - 74750902 -ATCTCTCTCCATCACTCA-GGGTGTGGA-GCTCTCTCTCCATCACTCAGGGGGTGGAGA---TCTCTCTCCATCACTC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=1614.000000 s hg38.chr3_KI270935v1_alt 144137 18 + 197351 -AGGGGTGCAGACACCCCA s panTro4.chr3 199789418 18 + 202329955 -AGGGGTGCAGACACCCCA i panTro4.chr3 C 0 C 0 s calJac3.chr17 954473 17 - 74750902 AGGGGGTGGAGTGTCTC-- i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 53053 0 + 111706 C e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431512 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83945 100 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=42908.000000 s hg38.chr3_KI270935v1_alt 144155 56 + 197351 TCTCCATCACTTAGGGGGTGGAA-ACCTCTCTCTATCGCTCAGCAGGTGTAGACACC s panTro4.chr3 199789436 56 + 202329955 TCTCCATCACTTAGCGGGTGGAA-ACCTCTCTCTATCGCTCAGCAGGTGTAGACACC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 53053 41 + 111706 ---------------GGGTGGAA-ATCTCTCTCCATGGCTCAGCAGGTGTAGACACC i rheMac3.chrUn_JH291127 C 0 T 116 s papAnu2.chr2 83845 55 - 187378091 TCTCCATCACTCAGGGGGTGGAG-CCCTCTCTCCATCACTCAG-GGGTGTAGACACC i papAnu2.chr2 T 100 C 0 s chlSab2.chr15 431512 41 - 91754291 ---------------GGGTGGAA-ATCTCTTTCCATGGCTCAGCAGGTGTAGACACC i chlSab2.chr15 C 0 T 41 s calJac3.chr17 954490 54 - 74750902 TCTCCATCACTCAGGGGGTGGAGTGTCTCTCTCCATTGCTCAGTGGGTGGAGAT--- i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=22080.000000 s hg38.chr3_KI270935v1_alt 144211 41 + 197351 CTCTCTCCATCGCTCAGGGGTGCAGACACCCCATCTCCATC s panTro4.chr3 199789492 29 + 202329955 CTCTCTCCATCGCTCAGAGGTGTAGACAC------------ i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52978 41 + 111706 CTCTCTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATC i rheMac3.chrUn_JH291127 T 116 T 273 s papAnu2.chr2 83900 41 - 187378091 CTCTCTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 954544 39 - 74750902 CTCTCTCTATCACTCAGGGG-GTGGA-GCTCTCTCCCCATC i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431553 41 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=884.000000 s hg38.chr3_KI270935v1_alt 144252 4 + 197351 ACTT s papAnu2.chr2 83941 4 - 187378091 ACTC i papAnu2.chr2 C 0 T 159 s calJac3.chr17 954583 4 - 74750902 ACTC i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 53019 273 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431553 41 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789521 0 + 202329955 C a score=291.000000 s hg38.chr3_KI270935v1_alt 144256 3 + 197351 AGG s calJac3.chr17 954587 3 - 74750902 AGG i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 53019 273 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431553 41 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83945 159 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789521 0 + 202329955 C a score=1294.000000 s hg38.chr3_KI270935v1_alt 144259 41 + 197351 GGGTGGAAACCTCTCTCTATCGCTCAGC-----AGGTGTAGGCACC s panTro4.chr3 199789521 9 + 202329955 ---------CCTCTCTCT---------------------------- i panTro4.chr3 C 0 C 0 s chlSab2.chr15 431512 41 - 91754291 GGGTGGAAATCTCTTTCCATGGCTCAGC-----AGGTGTAGACACC i chlSab2.chr15 T 41 T 260 s calJac3.chr17 954590 40 - 74750902 GGGTGGAG-TGTCTCTCCATCGCTCATCCCTCGGGGCGTGG----- i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 53019 273 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83945 159 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=0.000000 s hg38.chr3_KI270935v1_alt 144300 3 + 197351 CCC e rheMac3.chrUn_JH291127 53019 273 + 111706 T e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954630 0 - 74750902 C e chlSab2.chr15 431553 260 - 91754291 T e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83945 159 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T e panTro4.chr3 199789530 0 + 202329955 C a score=37096.000000 s hg38.chr3_KI270935v1_alt 144303 38 + 197351 CTCCATCGCTCAGGGGTGTAGACACCCTCTCTCCATCA s panTro4.chr3 199789530 34 + 202329955 ----ATCGCTCACGGGTGCAGACACCCTCTCTCCATCG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52746 38 + 111706 CTCCATCGCTCGGGGGTGTAGACACCCTCTCTCCATCA i rheMac3.chrUn_JH291127 T 273 C 0 s papAnu2.chr2 83786 38 - 187378091 CTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCA i papAnu2.chr2 T 159 C 0 s chlSab2.chr15 431293 38 - 91754291 CTCCATCACTCAGGGGTGTAGACACCCTCTCTCCATCA i chlSab2.chr15 T 260 C 0 s calJac3.chr17 954630 23 - 74750902 ------------GGGGTGCAG---CCCTCTCTCCATCA i calJac3.chr17 C 0 T 183 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=17895.000000 s hg38.chr3_KI270935v1_alt 144341 21 + 197351 CTCAGGGGTGCAGACACCCCA s panTro4.chr3 199789564 21 + 202329955 ATCAGGGGTGCAGACACCCCA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 52784 21 + 111706 CTCAGGGGTGTAGACACCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83824 21 - 187378091 CTCGGGGGTGTAGACACCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431331 21 - 91754291 CTCAGGGGTGTAGACACCCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954470 20 - 74750902 CTCAGGGG-GTGGAGTGTCTC i calJac3.chr17 T 183 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907031 42 + 123690457 T a score=29358.000000 s hg38.chr3_KI270935v1_alt 144362 17 + 197351 TCTCCATCACTTAGGGG s panTro4.chr3 199789585 17 + 202329955 TCTCCATCTCTTAGCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120906989 17 + 123690457 TCTCCATCACTTAGGGG i nomLeu3.chr11 T 42 C 0 s rheMac3.chrUn_JH291127 52805 17 + 111706 TCTCCATCACTCAGGGG i rheMac3.chrUn_JH291127 C 0 I 272 s papAnu2.chr2 83845 17 - 187378091 TCTCCATCACTCAGGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431352 17 - 91754291 TCTCCATCACTCAGGGG i chlSab2.chr15 C 0 I 184 s calJac3.chr17 954490 17 - 74750902 TCTCCATCACTCAGGGG i calJac3.chr17 C 0 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=3091.000000 s hg38.chr3_KI270935v1_alt 144379 7 + 197351 GTGGAAA s panTro4.chr3 199789602 7 + 202329955 GTGGAAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907006 7 + 123690457 GTGGAAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 83862 7 - 187378091 GTGGAGC i papAnu2.chr2 C 0 I 103 s calJac3.chr17 954507 5 - 74750902 GTGGA-- i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=873.000000 s hg38.chr3_KI270935v1_alt 144386 3 + 197351 CCT s panTro4.chr3 199789609 3 + 202329955 CCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907013 3 + 123690457 CCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954512 0 - 74750902 C e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83869 103 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=382.000000 s hg38.chr3_KI270935v1_alt 144389 4 + 197351 CTCT s panTro4.chr3 199789612 4 + 202329955 CTCT i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954512 0 - 74750902 C e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83869 103 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=4254.000000 s hg38.chr3_KI270935v1_alt 144393 164 + 197351 CTCACTCAGCAGGTGTGGACACCCTCTCTCCATCGCTCAGCAGGTGTGGACACCCTCTCTCTATTGCTCAGCAGGTGTGGACACCCTCTCGCCATCGCTCAGCAGGTGTGGACACCCTCTCTCTATCGCTCAGC-----AGGTGTGG-----ACA-CCCTCTCGCCATCGCTCAG s calJac3.chr17 954512 146 - 74750902 ------------GTGT-------CTCTCTCCATTGCTCAGTGGGTGGAGA---TCTCTCTCTATCACTCAG--GGGGTGGA-GCTCTCTCCCCATCACTCAGGGGGTGGAG----TGTCTCTCCATCGCTCATCCCTCGGGGCGTGGGGGGTGCAGCCCTCTCTCCATCATTGAG i calJac3.chr17 C 0 T 5 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83869 103 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907016 0 + 123690457 C e panTro4.chr3 199789616 0 + 202329955 C a score=0.000000 s hg38.chr3_KI270935v1_alt 144557 20 + 197351 CAGGTGTGGACACCCTCTCG e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954658 5 - 74750902 T e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83869 103 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907016 0 + 123690457 C e panTro4.chr3 199789616 0 + 202329955 C a score=5680.000000 s hg38.chr3_KI270935v1_alt 144577 71 + 197351 CCATCGCTCAGCAGGTGTGGACACCCTCTCGCCATCGCTCAGCAGGTGTGGACACCCTCTCTCTATCGCTC s panTro4.chr3 199789616 71 + 202329955 CTATTGCTCAGCAGGTGTAGACACCCTCTCTCCATTGCTCATCAGGTGTGGACACCCTCTGTCTATCGCTC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954658 5 - 74750902 T e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83869 103 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=4376.000000 s hg38.chr3_KI270935v1_alt 144648 16 + 197351 AGCAGGTGTGGACACC s panTro4.chr3 199789687 16 + 202329955 AGCAGGTGTGGACACC i panTro4.chr3 C 0 C 0 s papAnu2.chr2 83972 16 - 187378091 AGCAGGTGTAGACACC i papAnu2.chr2 I 103 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954658 5 - 74750902 T e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120907016 0 + 123690457 C a score=300.000000 s hg38.chr3_KI270935v1_alt 144664 1 + 197351 C s panTro4.chr3 199789703 1 + 202329955 C i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907016 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 52822 272 + 111706 I e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954658 5 - 74750902 T e chlSab2.chr15 431369 184 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 83988 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1365.000000 s hg38.chr3_KI270935v1_alt 144665 1 + 197351 T s panTro4.chr3 199789704 1 + 202329955 T i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907017 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53094 1 + 111706 T i rheMac3.chrUn_JH291127 I 272 C 0 s papAnu2.chr2 83988 1 - 187378091 T i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431553 1 - 91754291 T i chlSab2.chr15 I 184 C 0 e mm10.chr16 65448038 0 - 98207768 C e canFam3.chr33 29083026 3 + 31377067 I e calJac3.chr17 954658 5 - 74750902 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2100.000000 s hg38.chr3_KI270935v1_alt 144666 1 + 197351 C s panTro4.chr3 199789705 1 + 202329955 C i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907018 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53095 1 + 111706 C i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83989 1 - 187378091 C i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431554 1 - 91754291 C i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29083029 1 + 31377067 C i canFam3.chr33 I 3 C 0 e mm10.chr16 65448038 0 - 98207768 C e calJac3.chr17 954658 5 - 74750902 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=10007.000000 s hg38.chr3_KI270935v1_alt 144667 7 + 197351 TCCATCG s panTro4.chr3 199789706 7 + 202329955 TCCATCG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907019 7 + 123690457 TCCATCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53096 7 + 111706 ACCATTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83990 7 - 187378091 ACCATTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431555 7 - 91754291 ACCATTG i chlSab2.chr15 C 0 C 0 s mm10.chr16 65448038 7 - 98207768 TCCCTTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29083030 7 + 31377067 CCCATCA i canFam3.chr33 C 0 C 0 e calJac3.chr17 954658 5 - 74750902 T e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=291845.000000 s hg38.chr3_KI270935v1_alt 144674 206 + 197351 CTCAGTCGCCCTCTCATGCTGTGTTCGGACTCAGCCTCC-------TCCCTCAGGGCCACAGGAGCCAGGACTGTCCCTCCAACTCTGCTCCAGGAGGCA--------GGGACCAGGGGGCCAGAGACGAATCCCAGAAGGTGGAAACGGCAGGAACAGTCCAGTTTCCCAAGTGTAGCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGC-----------CC s panTro4.chr3 199789713 204 + 202329955 CTCAGTCGCCCTCTCATGCTGTGTTCGGACTCAACCTCC-------TCCCTCAGGGCCACAGGAGCCAGGACTGTCCCTCCAACTCTGCTCCAGGAGGCA--------GGGACCAGGGGGCCAGAGACGAATCCCAGAAGGTGGAAACGGCAGGAACAGTCCAGTTCCCCAAGAGTAGCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGT------------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907026 200 + 123690457 CTGAGTCGCCCTCTCATGGTGTGTTCCAACTCAGCCTCC-------TCCCTGAGGGCCACAGGAGCCAGGACTGTCCTTCCAACTCCGCTCCAGGAGACA--------GGGACCAGCGGGCCAGAGACTAATCCCAGAAGGTGGAAATGG------CAGTCTGGTTTCCCAAGTGTAGCTTTTTACTCCT-------GAGAAGGCCCCGCAGAAGCAGCGGTGGGC-----------CC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53103 200 + 111706 CTGAGTCGCCCTCTCATGGTGCGTCC---CACAGCCTCC--------CCCTGAGGGCCGCGGGAGCCAGGACGGCCCCTCCAACTCCG-TCCAGGGGACA--------GGGACCGGGGGGCCAGAGACTAATGCCAGAACGCGGGCACGGCGGGAACAGCTCCGTTTCCCAAGCGCAGCGTTTTGCTCCG-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------CC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 83997 188 - 187378091 CTGAGTCGCCCTCTCATGGTGCGTCC---CACAGCCTCC--------CCCTGAGGGCCGCGGGAGCCAGGACGGCCCCTCCAACTCCGCTCCAGGGGA---------------CgggggggCGGTG------GCCAGAACGCGGGCACGGCGGGAACAGCTCCGTTTCCCAAGCGCAGCGTTTTGCTCCG-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------CC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431562 187 - 91754291 CTGAGTCGCCCTCTCATGGTGCGTCC---CACAGCCTCC--------CCCTGAGGGCCGCGGGAGCCAGGACGGCCCCTCCAACTTCG-TCCAGGGGACA--------AGGACCAGGGG-------------GCCAGAACGCGGGCAGGGCGGGAACAGCTCCGTTTCCCAAGCGCAGCGTTTTGCTCCT-------GGGAAGGCCGCGCAG-AGCAGCGCTGGGC-----------CC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954653 214 - 74750902 TTGAGTCGCCCTCTGATGGTGTATTCCT-CTCAGCCTCC-------TCCCTGTGGGGTGCAGGAGCCAGGACTGCCCTTCCAACT--GCTCCAGGAGACA--------GAGACCCGGGGGCCAGAGACTAATCACAGAACATGGAAACGACAGGAACAGTCAAGTTTCCCAAGCTTAGCTTTTTACTCAT-------AAGAAGGCCCCGCAGAAGTAGCGGTGAGCTGGGGGCCGGGCC i calJac3.chr17 T 5 C 0 s mm10.chr16 65448045 184 - 98207768 CTGTGCTGAGCTCTCATTGGGTGTCC---CTACTCCTGT--------CCCTGAGGGCAAGAAAAGCCAGGTTTGCTGTTCC--------------------------------CAGGGAATCAGGAAGTAACCCAGGGAAATAGAAATGGCGAGAACCAATCAAGTTTCTAAGCTTAGCTTCTTCCTCAGTTTAAAAAAAAAAAATCTGTGA-AGCAGCCAGGATC-----------CC i mm10.chr16 C 0 I 67 s canFam3.chr33 29083037 218 + 31377067 CGGTGTTGCCCTACCTTAGGGTGTCCTGCCTCAGCCCGCCACCCCGCCCCTGAGGGCTGCAGGGGCCATGGCTGCCATTCCAACTCTCCTCCAGGAGACGCGGCTACTTGGCCTGAGGAACCAGGAAACATTCATAGAAAATGTACACAGCATTAAAAGG-CAGTTTCCCAAATAGAGCTTTCTCCTCAT-------AAAAAGGCCCTGAA--AATAGTGGAGAGC-----------TT i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=56190.000000 s hg38.chr3_KI270935v1_alt 144880 49 + 197351 AGCAGGTGGGCAGCCCTCGCCTGGCACCCTGTGTTCCTCAGGCAGAGGC s panTro4.chr3 199789917 43 + 202329955 ------TGGGCAGCCCTCGCCTGGCACCCGGTGTTCCTCAGGCAGAGGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907226 49 + 123690457 AGCAGGTGGGCAGCCCTCGCCTGGCACCCGGTGTTCCTCGGGCAGAGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53303 47 + 111706 AGCAGGC-GTCCGCCCTCGCCTGGCGCCCCGTGTTCCTC-GGCAGACGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84185 47 - 187378091 AGCAGGC-GTCCGCCCTCGCCTGGCGCCCCGTGTTCCTC-GGCAGAGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431749 47 - 91754291 AGCAGGC-GTCCGCCCTCGCCTGGCGCCCCGTGTTCCTC-GGCAGACGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954867 49 - 74750902 TGCAGGTGGGCAGCCTTCGCCTGGCTCCCCGTGTTACTCGGCCAGAGGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29083255 30 + 31377067 -------------------ACTGGACCCCGAGACCTCTATAGTAAGGTA i canFam3.chr33 C 0 C 0 e mm10.chr16 65448229 67 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=529050.000000 s hg38.chr3_KI270935v1_alt 144929 295 + 197351 CTGACAT-TAAGGAGGCTG----TGGGGATGGACG-----AGGGGCCCAGCCAAG---------GCTGCTTCCATTCCCGCTTCCTCTGGGTT------------------CCGTCTCGAAG--CAGGAGAGAGAAGT-GGGCC--------CTGGGAGTTCAGGCTGCGC------------GGGCCGCAGCC-CGGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCAGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGTCTGCCCCATAGGGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA s panTro4.chr3 199789960 295 + 202329955 CTGACAT-TAAGGAGGCTG----CGGGGGTGGACG-----AGGGGCCCAGCCAAG---------GCTGCTTCCATTCCCTCTGCCTCTGGGTT------------------CCATCTCGAAG--CAGGAGAGAGAAGT-GGGCC--------CGGGGAGTTCAGGCTGCGC------------GGGCCGCAGCC-CGGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCAAGGGGGAAGCCTGTCGCCGGCTTGAAGAGTGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTTCAGGTCCCCGGCGCCTGCCCCATAGGGGAAGAGGGAAACTCCTGGGC---CAGGACAGAGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907275 280 + 123690457 CTGACAT-TAAGGAGGCTG----TGGGGGTGGACG-----AGGGGCCCAGCCAAG---------GCTGCTTCCACTCCCGCTTCCTCTGGGTT------------------CCATCTCCAAG--CTGGAGAGAGAAGT-GGGCC--------CAGGGAGCTCAGGCCGCAT------------AGGCCGCAGCC-CAGACTCACGTAGAGGGAATCACGGAGAGAGGAGCCGAGGGGGAAGCCAGTCGCTGGCTTGAAGAGTGGGGAGGTGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCGGTGCCTGCCCCGTAGGGGAAGAGGGAAACTCC------------------AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53350 281 + 111706 CTGACAT-TAAGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG---------GCTGCCTCCACTCCTGCTTCCTCTGGGTT--------------------GTCTCGGAG--CTGGGGAGAGAAGC--GGCC--------CAGGGAGCCGA---------------------GGCCGCCGCC-GGGACTCACGTAGAGGGAATCGCGGAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGAGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGCCGACCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84232 281 - 187378091 CTGACAT-TAAGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG---------GCTGCCTCCACTCCTGCTTCCTCTGGGTT--------------------GTCTCGAGG--CTGGGGAGAGAAGC--GGCC--------CAGGGAGCTGA---------------------GGCCGCCGCC-GGGACTCACGTAGAGGGAATCGCGGAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGAGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCGCCGGCCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 431796 281 - 91754291 CTGACAT-TAAGGGGGCTG----TGGGG-CGCACG-----AGGGGCCCCGCCGAG---------GCTGCTTCCTCTCCTGCTTCCTCTGGGTG--------------------GTCTCGAAG--CCGGGGAGAGAAGC--GGCC--------CAGGGAGCTGA---------------------GGCCGCCGCC-GGGACTCACGTAGAGGGAATCGCGCAGCGAGGAGCCGAGGGGGAAGCCAGTCGCGGGCCTGAAGGGCGGGGAGGTGAAGTCCACGGTCCTCCTGACGAACTCCAGGTCCCCGGCACCGGCCCCGTAGGGGAGGAGGGAAGCTCCT-GGC---CAGGACAAAGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 954916 295 - 74750902 CTGACAG-TAAGAAGGCTG----TGGAGGTGAACGAAACTAGAGGCCCAGCCAAG---------GCTGCTTCCACTCCCAGTTC--CTGGGTT------------------CCATCCTGAAG--CTGGAGAGAGAAGC-GGGCC--------CAGGGAGCTCAGGCTGTGC-------------GGCCTCAGT---GAACTCACATAGAGAGAATCCCGGAGAGAAGAGCCGAGGGGAAAGCCAGTCAGGGGCTTGAAGAGTGGGGAGGTGAAGTCCACAGTCCTCCTGACGAACTCCAGGTCCCCAGCGCCCGACCCGTAGGGGAGGAGGGAAACTCCTGGGC---CAGGACAAAGAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65448296 306 - 98207768 CTGACATAAAAGAAGGCTA----------CAAAAG-----TGTTGTACAGCAAAG-----------TGACCTCATTCTTTCTTCTGCTCTGTCAT-------------GGGCCATCT-------CTGCAGAGAAACAG--GGCCCAAAAGAACAAAGAACACAGGCCACAGACATGACCC--AAGGCTACAGTCAGAGACTCACGTAGAAGGAATCCCGCAGGGAGGAACCGAGGGGAAAGCCAATCAGGATCTTGAAGATTGGTGAGTTAAAATCCACAGTCCTGGCAAACAAATTCTGGTCTCCGACTTCAGACCCGTAGGGGAAGAGGGAAATGCCTAGAC---AAGGACAGAGGA i mm10.chr16 I 67 C 0 s canFam3.chr33 29083285 334 + 31377067 ---------AAGACACTTGTCCCTGAGGGTA---G-----GAGGGCCTTGCCTAGCTCCCAGTTGCTTGTCGCACACTTCCTTCCTCTGGGCCATGGTCATGGTCACAGGGCCATCGTCAAGCCCTAGAGAGAGAAGTAGAGTC--------TGGGAAGCACAGGTCACAGGTCCTGCCCTTTGGTCTACACCTGGGGACTCACATAGAGGTAATCCCGGAGAGAGGAGCCAAGAAGGAAGCCAATCTGGGGCCTGAAGAGTGGTGAGGTGAAGTCCGTGGTCCTCTCGACAAACTCCCTGTCTCCAACACTTGGCCCGTAAGGGAAGAGGGAAACGCCTGGGCCAGCAGGACAAAGGA i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=352843.000000 s hg38.chr3_KI270935v1_alt 145224 231 + 197351 GAGCAGGAAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCCAGAGCGCTCCCCGCAGGCTG-CCCACACCTGTCCTGTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCTAGG-----GTGCTTCTCGCTCCCTCTCCACCCACATTAAATGCATGTGGTCATTTTACTCCCTAAACTGCGCCTCTCATCCTTCCCCAGCTTGGAGAA---AAACAG----GTCCTGCTGTCAGA s panTro4.chr3 199790255 231 + 202329955 GAGCAGGAAGTCCAAGTGGGCCTGGGCCTTCTTTAGGGCTGAAAGGGATCCCAGATCGCTCCCCGCAGGCTG-CCCACACCTGTCCCGTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCGAGG-----GTTCTTCTTACTCCCTCTCCACCCACATTGAATGCATGTGGTCATTTTACTCCCTAAACTGCGCCTCTCATCCTTCCCCAGCTTGGAGAA---AAACAG----GTTCTGAAATAAAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907555 231 + 123690457 GAGCAGGAAGCCCAAGTGGGCCTGGGCCTGCTTTAGGGCTGAAAGGGATCCCAGAGTGCTCCCCGCACACTG-CCCGCACCTGTCCCCTGTTCCCCGAGGGCCCCAGAGG----------CAGCCATCGAGG-----GTTCTTGTTGCTCCCTCTCCACCCACACTGAATGCATGTGGTCATTTTACTCCCTAAACTGCGCCTCTCATCCTTCCCCAGCTTGGAGAA---AAACAG----GTCCTGCTGTCAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53631 228 + 111706 GAGCAGGACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCCAGAGCCCTCCCCGCGCGCTG-CGCGCACCTGCCCC--GTTCCCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGCTCCCTCTCCACCCACACTGAACGCATGTGGTCATTTTACTCCC-GAACTGCGCCTCTCATCCTTCCCCAGCTCGGAGGA---AAACAG----GTCCTGCTGGCAGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84513 228 - 187378091 GAGCAGGACGTCCGAGGGGGCCCGGGCCTTCTTTAGGGCCGAAAGGGATCCCAGAGCGCTCCCCGCGCGCTG-CGCGCACCTGCCCC--GTTCCCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGCTCCCTCTCCACCCACACCGAACGCATGGGGTCATTTTACTCCC-GAGCTGCGCCTCTCATCCTTCCCCAGCTCGGAGAA---AAACAG----GTCCTGCTGGCAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432077 227 - 91754291 GAGCAGGACGTCCGAGGGGGCCTGGGCCTTCTTTAGGGCCGAAAGGGATCCCAGAGCGCTCCCCGCGCGCTG-CGCGCACCTGCCCC--GTT-CCCGAGGGCCCCAGAGG----------CAGCCAGCAAGG-----GCTCTTGTGGCTCCCTCTCCACCCACACCGAACGCATGTGGTCATTTCACTCCC-GAACTGCGCCTCTCATCCTTCCCCAGCTCGGAGGA---AAACAG----GTCCTGCTGGCAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955211 225 - 74750902 GAGCAGGACGTCCAAGTGGGCCT------------GGGCTGGAAGGGATCCCAGAGACCCCCCCAC--GCTGCCCCGCACCTGCCCTCTCCACCCCGATGGCCCCAGAGGCCCTGCCAGCCAGCCATCCAGG-----GTTCTT---GCTCCCTCTCCACCCGCGTTGAGCGCACGCCGTCATTTTACTCCCTACACTGTGCCTGGCATCCTTCCCCAGCTTGGAGAA---AAACAG----GTCCTGCTGTCAGA i calJac3.chr17 C 0 I 20 s mm10.chr16 65448602 207 - 98207768 GAGAGCAGAGTCCTTGAGGGTCATCCCTCCTTTCAGGTTCAGGAGGACCCTGAGAGAGCTTC-----------CCCTAACCTGTCTCCTCTT-----------TCAGAAG----------CAACTCCCGTAGACCTTACTCTTCGTTCCACCTCTCCATACACA--------------TCTGTTTACTTCT-CAGCTGGAACCCTCATCATCCCTCAGGTTAGAGCATCCTGACATGACCGTCCTGCTGTTAGG i mm10.chr16 C 0 C 0 e canFam3.chr33 29083619 0 + 31377067 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=22005.000000 s hg38.chr3_KI270935v1_alt 145455 15 + 197351 ATACCAGCAAACGAT s panTro4.chr3 199790486 15 + 202329955 ATACCAGCAAACGAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907786 15 + 123690457 ATACCAGCAACCGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 53859 15 + 111706 ATACCAGCAAACGAT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84741 15 - 187378091 ATACCCGCAAACGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432304 15 - 91754291 ATACCAGCAAACGAT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65448809 15 - 98207768 ATAGCACCATAGGAT i mm10.chr16 C 0 I 24 e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=220839.000000 s hg38.chr3_KI270935v1_alt 145470 200 + 197351 TCTCAATCTCTTAGT----CTCAATCCTTTTCAGGGTTAAAAGACAAAAGTCTATgctgggtgcggtggctcacgcctgtaatcccagcac-tttgggaggctgaggcgggaggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaagccctgtctctacttaaaatacaaaaattagccgggtgtggtggcg s panTro4.chr3 199790501 200 + 202329955 TCTCAATCTCTTAGT----CCCAGTCCTTTTCAAGGTTAAAAGACAAAAGTCCATgctgggtgcagtggctcacgcctgtaatcccagcac-tttgagaggatgaagcaggaggatcacgaggtcaggagttcgagaccagcctgaccaaaatggagaagccctgtctctacttaaaatacaaaaattagccgagtgtggtggcg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120907801 202 + 123690457 TCTCAATCTCTTAGT--ACCCCAATCCTTTTCAGGGTTAAAAGACAAAAGCCCATgccgggcgcggtggctcacgcctgtaatctcagcac-tttgggaggctgaggcaggaggatcatgaggtcaggagttcgagaccagcctgaccaacatggagaagccctgtctctacttaaaatacaaaaattagccgggcgtggtggcg i nomLeu3.chr11 C 0 I 3 s rheMac3.chrUn_JH291127 53874 205 + 111706 TCGCCATCTCTTAGGTAGTCCCAATCCTTTTCAGGGTTAAATGACAAACGTCCATGAcggacgcggtggctctcgcctgtaatcccagaacttttggtaggccgaggcgggtggatcacgaggtcaggagttcgagaccagcctgaccaagatggagaaacctcgtctctactaaaaatacaaaaactagcctggtgtggtggtg i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84756 183 - 187378091 TCGCCATGTCTTAGGTAGTCCCAATCCTTTTCAGGGTTAAAtg---------------------ggtggctctcgcctgtaatcccagaac-tttgggaggccgaggcgggtggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaaacctcgtctctactaaaaatacaaaaactagcctggtgtggtggcg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432319 204 - 91754291 TCGCCATCTTTTAGGTAGCCCCGATCCTTTTCAGGGTTAAATGACAAACGTCCATGGcggacgcggtggctctcgcctgtaatcccagaac-tttgggaggccgaggcgggtggatcacgaggtcaggagttcgagaccagcctgaccaacatggagaaacttcgtctctactaaaaatacaaaaattagccaggcgtggtggcg i chlSab2.chr15 C 0 I 132 e mm10.chr16 65448824 24 - 98207768 I e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=-282.000000 s hg38.chr3_KI270935v1_alt 145670 1 + 197351 c s panTro4.chr3 199790701 1 + 202329955 c i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120908006 1 + 123690457 t i nomLeu3.chr11 I 3 C 0 s rheMac3.chrUn_JH291127 54079 1 + 111706 g i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84939 1 - 187378091 c i papAnu2.chr2 C 0 C 0 e mm10.chr16 65448824 24 - 98207768 I e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e chlSab2.chr15 432523 132 - 91754291 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=85558.000000 s hg38.chr3_KI270935v1_alt 145671 68 + 197351 atgcctgtaatcccagccactcgggaggctgaggcaggagaattgcttgaacccgggaggctgaggtt s panTro4.chr3 199790702 68 + 202329955 atgcctgtaatcccagccactcgggaggcagaggcaggagaatcgcttgaacccgggaggctgaggtt i panTro4.chr3 C 0 M 696 s nomLeu3.chr11 120908007 68 + 123690457 tcgcctgtaatcccagctactccggaggctgaggcaggagaattgcttgaacccaggaggcggaggtt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54080 68 + 111706 acgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggtt i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 84940 68 - 187378091 atgcctgtaatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggtggaggtt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432655 68 - 91754291 gcgcctgtaatctcagctactcgggaggctgaggcaggagaatctcttgaacccgggaggtggaggtt i chlSab2.chr15 I 132 C 0 e mm10.chr16 65448824 24 - 98207768 I e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=43416.000000 s hg38.chr3_KI270935v1_alt 145739 71 + 197351 ccagtgagctgagatcgcgccactgcactccagcctgggcaacaagagcgaaaactccatctcaaaaaaaa s nomLeu3.chr11 120908075 71 + 123690457 ccagtgagctgagatcgcgccattgcactccagtctgggcaacaagaacggaaactccgtctcaaaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54148 67 + 111706 tcagtgagccaagattgctccactgcaccccagcctgggcgacaagagc-aaccctccgtttc---aaaaa i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85008 65 - 187378091 tcagtgagccaagattgctccactgcactccagcctgggcgacaagagc-aaccctccgtttc-----aaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432723 62 - 91754291 tcagtgagccaagattgctccactgcactccagcctgggcgacaagagc-aaccctccgtttc-------- i chlSab2.chr15 C 0 C 0 e mm10.chr16 65448824 24 - 98207768 I e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=13649.000000 s hg38.chr3_KI270935v1_alt 145810 17 + 197351 aaaaaaaaaa-tagacaa s nomLeu3.chr11 120908146 18 + 123690457 aaaaaaaaaagaagacaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54215 17 + 111706 aaaaaaaaaa-atgacaa i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85073 17 - 187378091 aaaaaaaaaa-atgacaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432785 16 - 91754291 -aaaaaaaaa-atgacaa i chlSab2.chr15 C 0 C 0 s mm10.chr16 65448848 17 - 98207768 AAAGGGCGAA-AAGACGA i mm10.chr16 I 24 C 0 e canFam3.chr33 29083619 0 + 31377067 C e calJac3.chr17 955436 20 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=84335.000000 s hg38.chr3_KI270935v1_alt 145827 63 + 197351 aaGTCCAGCGCAATGAAGATGAGTAACTGCAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT s nomLeu3.chr11 120908164 63 + 123690457 aaGTGCAGCGCAATGAAGATGAGCAACTGCAAAGCCCTTTTCAGGGAATGAGACTTGTTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54232 63 + 111706 aaGTCCAGTGCAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAATGAGACTTGCTTCCT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85090 63 - 187378091 aagtccAGTGCAGTGAAGATTCGTGACTGCAGAACCCTTTTCAGGGAATAAGACTTGCTTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432801 63 - 91754291 aaGTCCAGTGCAGTGAAGATTCGTGACTGCAGAGCCCTTTTCAGGGAATGAGACTTGCTTCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955456 62 - 74750902 AAGCCCAACACAGTGAAGATGAGAAACTGCA-AGTCCTTTTCAGGAAACGAGACTTGTTTCCT i calJac3.chr17 I 20 C 0 s mm10.chr16 65448865 62 - 98207768 AACTCCAAAACAGCAAAGACTAGTCACT-TAAAGACCTTTTCATAAAATGACACCTATTTCCT i mm10.chr16 C 0 C 0 e canFam3.chr33 29083619 0 + 31377067 C e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=337337.000000 s hg38.chr3_KI270935v1_alt 145890 266 + 197351 AAGACGGCCTTTCTCCAGATAAACTTGAAGAC----------TCCTCCAATTTAACCTAGGACTCCCTAGAGGCCCTCGGGCTCCAGTGTGAGAAACCTTGTCCCAAATATTTCTCGCAGCTGCCGACTC--------CTTGGCGCCCTCCCCTGGTCCTGCTTGGA---------AACCCGCAG-GCTCTCCTGGCCTCCTCACTG------------------CCTGCAAATCGGAC---CGCTCCAGGCACCACTTGTTAAATGCCATTTGTACAATGCAAAACTGAGTCCTCCCTGGCTCCCGTTGCCTAC s nomLeu3.chr11 120908227 265 + 123690457 AA-CTGGCCTTTCTCCAGATAAACTTGAGGAC----------TCCTCGAATTTAACCTATAACTCCCTAGAGGTCCTCGGGCTCCAGTTTGAGAAACCTTGTCCCAAATATTTCTCCCAGCTGCCGACTC--------CTTGGCACCCTCCCCTGGTCCTGCTTGGA---------ATCCTGCAG-GCTCTCCTGGCCTCCTCACTG------------------CCTGCAAATCTCAC---CACTCCAGGCACCACTTGTTAAATGCCATTTGTACAATGCAACACTGAGTCCTCCCAGGCTCCCCTTACCTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54295 264 + 111706 AAGATGGCCTTTCTCCGGTTAAACGTGAAGAC----------TCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCCGGTTTGAGAAACCTGGTCCCAAATATTTCTCGCAGCTGCCGACTC--------CTTGGGGCCCTCCCCTGGTCCTGCTTGGA---------ATCCTGTAG-GCTCTCCTGGCCTCGTCGCTG------------------CCTGCACATCTGGC---CGCTGCAGGCACCACTTGTTAAATGCCATTTGTACAATGCAAAAC--AGTCCTCCCTGGCTCTCCTTACCTAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85153 264 - 187378091 AAGATGGCCTTTCTCCGGTTAAACTTGAAGAC----------TCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCCGGTTTGAGAAACCTTGTCCCAAATATTTCTCGCAGCTGCCGACTC--------CTTGGGGCCCTCCCCTGGTCCTGCTTGGA---------ATCCCGTAG-GCTCTCCTGGACTCGTCGCTG------------------ACTGCACATCTGGC---CGCTGCAGGCACCACTTGTTAAATGCCATTTGTACAATGCAAAAC--AGTCCTCCCTGGCTCTCCTTACCTAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 432864 264 - 91754291 AAGACGGCCTTTCTCCGGTTAAACTTGAAGAC----------TCCTCGAATTTAACCTAGGACTCCCTAGAGGTTCTTGGGCTCGGGTTTGAGAAACCTTGTCCCAAATATTTCTCGCAGCTGCCGACTC--------CTTGGGGCCCTCCCCTGGTCCTGCTTGGA---------ATCCCGTAG-GCTCTCCTGGCCTGGTCGCTG------------------CCTGCACATCTGGC---CACTGCAGGCACCACTTGTTAAATGCCATTTGTACAATGCAAAAC--AGTCCTCCCTGGCTCTCCTTACCTAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955518 252 - 74750902 AAGATGGCATTTCTCCAGAGAAACTTAAAGAC-----------CCTCGAATTTAGCCTAGGCCGCCCTAGAGGTCCTTAGGCTCCAGTTTGAGAAACCCTGTCCCAAACAATTCTCACAGCTGCTGACTC--------CTTGGCGCCCTCCCCTGGTCCTGCCTGGA---------ATCCCGCAG-GCTTTCCTGGCCTCCTCAC--------------------CCTGCAAATCTGAC---CACTCCAGCCACA-------GGGTGCCATTTGTAAAATGCAGG----AGTCCTCCCTGGCGCTCCTTACCTCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65448927 270 - 98207768 ACAGCGGTACTTCTTCAGATAAACTTGAAGACACTCCCACCCACCCCGGAATTGCCCAAGGCCACCCTGTATGTCCTCAGATTCCAGTTTGGGAAACTATGTCTTAAGTGTTTCCCACATGGATCTAACT--------CTATATATACT-ACATGGCCTTGATTGGC---------TTAGCACAG---TCTCTTGGCTTCCTCACTGATGCCTCCCTCGATTGACCATCCAGGTTTATC---CATACCAGCCACCACT--------------------GTGCAGATCTGTATCCTCCCTGATTC-CCTTACCCAC i mm10.chr16 C 0 I 1915 s canFam3.chr33 29083619 264 + 31377067 AAGTCGGTATTTGTCCAGATACACGGGTAGATACCCCTCCCCCGCCCGAATTTGTCCTTGGACCCCTCAGATGTCCTTGGGTTCTAGCTTGAGAAAGCTTGTCTTAAATATTTCTCAAACGAGTCTCCCCCTTTCGTTCTTGGCAGCCCTCCCTGTT--GGCCTGGATACCACCGCATCTCATAGGGCCCACTCGGCCT--------------------------CCTGGAAATTCACCCAACACCCCACCCACCACG---------------GCACCATCCAAGTATAAACCTGGCCGGGTCCTAC-------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=114542.000000 s hg38.chr3_KI270935v1_alt 146156 93 + 197351 -----AGGATTCCCCGCATGCCGGCCGCACTTTTTGCTACCCTTCTTCTCATTTTCAGCCACCCCAAATGCTTCGGGGATCCACTCCCCATGCAGCAC s nomLeu3.chr11 120908492 93 + 123690457 -----AGGGTGCCCCGCATGCCGGCCGCACTTTTTGCTACCCTTCTTTTCATTTCGAGCCACCCCAAATGCTTCGGGGATCTGCTCCCCATGCAGCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54559 89 + 111706 -----AGGATT----GCATGCTGGCCGCACTTTTTGCTCCTCTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGGATCCGCTCCCCATGCAGCAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85417 89 - 187378091 -----AGGATT----GCATGCTGGCCGCACTTTTTGCTCCTCTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGGATCCACTCCCCATGCAGCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433128 89 - 91754291 -----AGGATT----GCATGCTGGCCGCACTTTTTGCTCCTCTTGTTCTCATTTTCAGCCACCCCAAATGATTCGGGGATCCACTCCCCATGCAGCAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955770 90 - 74750902 -----AGGATT-CCCGCATGCCAGCCGCAC--TTTGCTCCTCTTCTTCTCATTTTCAGCAACCCCAAATGCTTTGGGGCTCCCCTCCCCATGCAGGAC i calJac3.chr17 C 0 I 3 s canFam3.chr33 29083883 92 + 31377067 CTGATTGTATC----ACATGACGGCCTCATTCTCAAC-ATTCTTCACCTGGTTTCCA-CACCCCCAAGTGTCTTGGGGGTCTCCTCCCCATGCAATAC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=6525.000000 s hg38.chr3_KI270935v1_alt 146249 10 + 197351 CGGGACGACT s nomLeu3.chr11 120908585 10 + 123690457 CGAGACGATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54648 10 + 111706 CGGGTCCACT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 85506 10 - 187378091 GGGGTCCACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433217 10 - 91754291 CGGGTCCACT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29083975 10 + 31377067 TGGGACTCCT i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 955860 3 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=4566.000000 s hg38.chr3_KI270935v1_alt 146259 16 + 197351 TTCTGCAGCCATACCT s nomLeu3.chr11 120908595 16 + 123690457 TTCTGCAGCCATACTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54658 16 + 111706 TTCCACCGCCATACCT i rheMac3.chrUn_JH291127 C 0 I 40 s canFam3.chr33 29083985 16 + 31377067 TTTCATGTCTACACTT i canFam3.chr33 C 0 I 17 e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 955860 3 - 74750902 I e chlSab2.chr15 433227 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 85516 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=4840.000000 s hg38.chr3_KI270935v1_alt 146275 53 + 197351 ACCACACTCGTACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACAGT s nomLeu3.chr11 120908611 53 + 123690457 ACCACACTCGTACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACGGC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e calJac3.chr17 955860 3 - 74750902 I e chlSab2.chr15 433227 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 85516 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199790770 696 + 202329955 M a score=28766.000000 s hg38.chr3_KI270935v1_alt 146328 142 + 197351 CATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGCCCATA-CCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACGGCCATACCTTCCAC-ACCCATACCTTCCACACCCATACCT s panTro4.chr3 199791466 142 + 202329955 CATACCTTC-ACACCCATACCTTCCACATCCATACCTTCCACGTGCGGAGCCTTCCACATCCATACCTTCCACACCCATACGTTCCACAcccataccttccacatccataccttccac-acccttaccttccacacccatacct i panTro4.chr3 M 696 C 0 s nomLeu3.chr11 120908664 143 + 123690457 CATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACGGACATA-CCTTCCACGGCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACGGACATACCTTTCACGGGCCGTACCTTCGACGGGCATATCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e calJac3.chr17 955860 3 - 74750902 I e chlSab2.chr15 433227 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 85516 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=72739.000000 s hg38.chr3_KI270935v1_alt 146470 904 + 197351 TCCACACCCATACCTTCCACGCCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGCCCATACCTTCCACGGCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGCCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACGCCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACGCCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCA s panTro4.chr3 199791608 904 + 202329955 tccacacccataccttccacactcataccttccacactcataccttccacactcataccttccacacccataccttccacacccataccttccacacccataccttccACGGCCATACCTTCCACACTCATAccttccacacccataccttccacacccttaccttccacacccataccttccacatccataccttccacacccttaccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacactcataccttccacactcataccttccacactcataccttccacacccataccttccacacccataccttccacatccataccttccacggccataccttccacacccataccttccacacccataccttccacatccataccttccacacccttaccttccacacccataccttccacacccataccttccacacccataccttccacactcataccttccacacccataccttccacactcataccttccacacgcataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccataccttccacacccttaccttccacacccataccttccacacccataccttccacacccataccttccacactcataccttccacactcataccttccacacccataccttccacagccataccttccacacccataccttccacacccataccttccacacccataccttccacacccttaccttccacacccataccttccacacccttaccgtccacacccataccttccA i panTro4.chr3 C 0 M 1364 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e calJac3.chr17 955860 3 - 74750902 I e chlSab2.chr15 433227 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 85516 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120908807 0 + 123690457 C a score=0.000000 s hg38.chr3_KI270935v1_alt 147374 325 + 197351 CAGTCATACCTTCCACGCCCATACCTTCCACAGTCATACCTTCCACACCCTTACCTTCCACAGTCATACCTTCCACGGCCATACCTTCCACACCCTTACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACAGTCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACACCCATACCTTCCACGGCCATACC e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e calJac3.chr17 955860 3 - 74750902 I e chlSab2.chr15 433227 0 - 91754291 C e macFas5.chr2 83084 14732 + 192460366 M e papAnu2.chr2 85516 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120908807 0 + 123690457 C e panTro4.chr3 199792512 1364 + 202329955 M a score=1345.000000 s hg38.chr3_KI270935v1_alt 147699 8 + 197351 TTCCACAC s papAnu2.chr2 85516 8 - 187378091 TTCCATGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433227 8 - 91754291 TTCCACGG i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e calJac3.chr17 955860 3 - 74750902 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120908807 0 + 123690457 C e panTro4.chr3 199792512 1364 + 202329955 M a score=4218.000000 s hg38.chr3_KI270935v1_alt 147707 8 + 197351 CCATACCT s papAnu2.chr2 85524 8 - 187378091 CCATACCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433235 8 - 91754291 CCATACCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955863 8 - 74750902 CCATGCCT i calJac3.chr17 I 3 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29084001 17 + 31377067 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120908807 0 + 123690457 C e panTro4.chr3 199792512 1364 + 202329955 M a score=12360.000000 s hg38.chr3_KI270935v1_alt 147715 17 + 197351 TCCACACCTTTGTTCCA s papAnu2.chr2 85532 17 - 187378091 TCCGCACTTTTGTTCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433243 17 - 91754291 TCCGCACTTTTGTTCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 955871 17 - 74750902 TCCACACCTTCCTTCCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084018 17 + 31377067 TCTACACTTTTATTCCA i canFam3.chr33 I 17 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120908807 0 + 123690457 C e panTro4.chr3 199792512 1364 + 202329955 M a score=10142.000000 s hg38.chr3_KI270935v1_alt 147732 10 + 197351 GCTGTTCCCG s nomLeu3.chr11 120908807 10 + 123690457 GCTGTTCCTG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 85549 10 - 187378091 GCTGTtcccg i papAnu2.chr2 C 0 I 13 s chlSab2.chr15 433260 10 - 91754291 GCTGTTCCCG i chlSab2.chr15 C 0 I 13 s calJac3.chr17 955888 10 - 74750902 GCTGTTCCCG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084035 10 + 31377067 GTTCTTCAAG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 54674 40 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=418346.000000 s hg38.chr3_KI270935v1_alt 147742 366 + 197351 CCCTCCTCCCTGCCTGGGGTGCTCCTCCATCCCCGGCTCT-----------------------------------------------GCATTCCTTAGGGCCTTCCATTGTGTGCACTTAGACCCTGGGATGAGTCCTCTAACC-------------GCCGCTACC-GGACCGTCCATCTATCCCTTGCTGAATGGCACTGGGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGGA-GCGACTCCGATGCTGTGTCCCTGTCCTCGGTAAGGCTCTCCCCACCCGAGAGAGCAGAGACTGTGGG-AAGTAGGCTGAGAGGGAGCCTTCACTTACATCACCCCTCAAAAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTCACCTGTATGGCCT----CACCTCTCTCAGGCAGGATGGGGATGGGGGC s nomLeu3.chr11 120908817 370 + 123690457 CCCTCCTCCCTGCTTGGGGTGCTCCTCCATCCCTGTCTCT-----------------------------------------------GCATTCCTCAGGGCCTTCCATTGTGTGCACTTAGACCCTGGGATAAGCCCTCTAACC-------------GCCTCTATG-AGACAGTCCATCTGTCTCTTGCTGAATGGCACCGAGGTCATTTCTCTGTCTCCAGCTCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGTTGTGTTCCTGTGCTTGGTAAGGCCCTCCCGACCCGAGAGAGCAGAGACTGTGGG-AAGCAGGCTGAGCGGGAGCCTTCAGTTACGTCGCCCCTCAAAAGG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------GGCCTCGCCTGTATGGCCTGACTCACCTTTCTCAGGCGGGATGGGGATGGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 54714 383 + 111706 CCCTCCTCCCTGCCCGGGGTGCTCTCCACCCCCTGGCTCT-----------------------------------------------GCCTTCCTTAGGGCTTTCCATTGTGTGTGCTTAGACCCTGGCATGAGTCCTCTAACCNNNNNNNNNNNNNNNNNNNNNN-NGACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCAATGCTGTGTCCCTGTCCTCAGTAAGGCCCTCCCGACCCGAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCGCCCAAAACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------AGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGGCgggacggggacgggggc i rheMac3.chrUn_JH291127 I 40 I 13 s papAnu2.chr2 85572 370 - 187378091 ccctcctccctgcccggggtgctctccatcccccggctct-----------------------------------------------gccttcctTAGGGCTTTCCATTGTGTGTGCTTAGACCCTGGCACAAGTCCTCTAACC-------------GCCTCTACC-AGACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGTAAGGCCCTCCCGACCCGAAAGAGCAGAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCGCTCAAAACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------TGTCTCACCTGTACGGCCTCACTCACCTTTCTCAGGCGGGAcgggcacgggggc i papAnu2.chr2 I 13 I 6 s chlSab2.chr15 433283 370 - 91754291 CCCTCCTCCCTGCCCGGGGTGCTCTCCACCCCCGGGCTCT-----------------------------------------------GCCTTCCTTAGGGCTTTCCATTGTGTGCGCTTAGACCCTGGCACGAGTCCTCTAACC-------------ACCTCTACC-AGACAGTCCATCTGTCCCTTGCTGAATGGCACCAGGGTCATTTCTCTGTCTCCAGCCCCTGGCCCAGTGCCATGCACAAAGCCAGCCCTCAGCA-GCGACTCCGATGCTGTGTCCCTGTCCTCAGTAAGGCCCTCCCGACCCGAAAGAGCAAAGACTGTGGG-AAGCAGGCTGAGAGGGAGCCATCAGTTACGTCACCGCTCAAAACG----------------------------------------------------------------------------------------------------------------------------------CACA---------------------------------TGTCTCACCTGCACGGCCTCACTCACCTTTCTCAGACGGGACGGGGACGGGGGC i chlSab2.chr15 I 13 C 0 s calJac3.chr17 955898 327 - 74750902 CCCTCCTCCCTGCCCTGAG------------------------------------------------------------------------------GCGTTTTCCATTGTGTGTGCTTATGCCCTGGGATTAATCCTCTAACT-------------GCCTCTACC-AGATAGT-GATCTGCCCCTTGCTGAATGGCACTAGGGTCATTTCTCTGTCTCTAGCT------------CCAGGCACAAAGCCAGCCCTCAGCA-GCGACTCTGATGCTGTCTCCCTGTCCTCGGTAAGGCCCTTCCCACCCAAGAGCGCAGAGACCATGGGCCAGCAGGCTGAGAAGCAACCTTTAGTTATGTCACCCCTCAAAAGG----------------------------------------------------------------------------------------------------------------------------------CATG---------------------------------GGGCACACCTCTACAGCATGACTCACCTTTCTCAGACGGGATGGGGACGGGGGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084045 569 + 31377067 CCCTCTTGCCTCCTTGGGATGCTTCTCCTTCTCCAGCTCCTATTCATTCTTTCCAGGAAGCCGCCTCTTCGCCTTGAGCATACCCCGACCTCCCCTGGGACCTTCCATTGTGT---CTAATACCCTGCATTTATTCCTCTAATC-------------GCACCTATCAAGGCAGCAGGTCCGTCTCTTACTAAACAGTACCGTGGTCACTTC----TCTCCACCTCCCAGCCTGGTGCCATGTACAGAGCCAGCCCTCCGCACCCAACTCTGATGCTGTCCCATAGCCCACTGT-GGGAGTTGACGACCCGAGAGAGT-----CTATGAGCAGGCGGGCTGAGACG-AGTCTTCAGTTCCATCTCCCCTCTAAAGGGGGTAGGGGAGCAGCTGGACTACCGATGGCCCAGAGGAGGCAGCACACATACCCACAGAACCAGCTCCCCCTGCTCCCCCAAAAGAGCCCTCACTGGTAGATCTAATCGAGCTGCCAAAACTACAGCATCCACATCTAGCTCAGATCTCTATATCCCAGAGTGGAGGGACCCCACCTCTCCAGGGACATTTACCTTTCTCTGGCTTGATGGGGACTGGGGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=29621.000000 s hg38.chr3_KI270935v1_alt 148108 37 + 197351 AGCTGTGGAGCGGGTGTGCATGGCAG-TGCTGGGAATG s nomLeu3.chr11 120909187 37 + 123690457 GGCTGTGGAGCGGGTGTGCGTGGCAG-TGCTGGGAGCG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 85948 37 - 187378091 ggctgtggagcgggtgtgcgtggcag-tgctgggagtg i papAnu2.chr2 I 6 I 39 s chlSab2.chr15 433653 37 - 91754291 AGCTGTGGAGCGGGTGTGCGTGGCAG-TGCTGGGAGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 956225 37 - 74750902 AGCTGTGGATCGGGTGTCTGTGGAAG-TGTTGGGAATG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084614 34 + 31377067 AGCCGTTGAGTGTGC---CGTGGATGCTGCTGGAGGG- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55097 13 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 83084 14732 + 192460366 M e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=91831.000000 s hg38.chr3_KI270935v1_alt 148145 97 + 197351 GTGGAAATGATGGTCTGGGAGG---------------------------------------------------------------------------------------TTGTGGGGGGTGGTGATGTGGCTGTGCGTCTCCCACCGTCTGTCTTCAGTGACGGTGTTGTCATTCCTGGACACG s nomLeu3.chr11 120909224 97 + 123690457 GCGGAAATGATGGTCTGGGAGG---------------------------------------------------------------------------------------TTGTGGGGGGTGGGGATGTGGCTGTGCGTCCCCCACCGTCTGTCTTCAGTGACGGTGTTGTCATCCCGGGACAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98034 97 + 192460366 GTGGCTGTGGTGGTCTTGGAGG---------------------------------------------------------------------------------------TTGTTGGGGGTAGTGATGTGACTCGGTGACTCTCGCTGCTTGTCTTCACTGAGGTTGTCATCATTCCTGGACACA i macFas5.chr2 M 14732 C 0 s papAnu2.chr2 86024 97 - 187378091 ggggctgtggcggtctgggagg---------------------------------------------------------------------------------------ttgttgggggtAGTGATGTGACTCGGCCACTCTCGCTGCCTGTCTTCACTGAGGTTGTCGTCATTCCTGGACACG i papAnu2.chr2 I 39 C 0 s chlSab2.chr15 433690 184 - 91754291 GCGGAGGTGGCGGCCTGGGAGGTGGTCGGGGGTGGGGATGGGGCTGTGGTGGAGGTGGCGGTCTCAGAGGTCGTTGGGGGTGTGGATGTGGCTGTGGCGGTCTGGGAGGTGGTCGGGGGTAGTGAGGTGACTCGGCCACTCTCGCTGCCTGTCTTCACTGACGTTGTCGTCATTCCTGGACACG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 956262 97 - 74750902 GCGGAGGTGATGGTTCGGGAGG---------------------------------------------------------------------------------------TTGTTGGGGGCAGTGATGCGGCCGTGCTTCTCCCAGTGTCGGTCTTCAGGGAGGGTGTCATCATTCCTGGACATG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084648 97 + 31377067 AGAGTAGTGAGCGTCCGCGAGG---------------------------------------------------------------------------------------TTGTTGAAGATAGTGATGTTGTTGTGCTACTCTGGCTGCCTATCGCCAGGGAAGTTACCGTGGTTCCTGGGCATA i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55097 13 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=242027.000000 s hg38.chr3_KI270935v1_alt 148242 141 + 197351 TGAAAAGACAAGGC-GGGGTGTTTCTTACAGTAACAAAACAGGAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAAA-CTC-CTTG----TCTCTCCCCTGCTCATATCCAAACTACTCTCGACATCAGTGC- s nomLeu3.chr11 120909321 142 + 123690457 TGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCGAAGAGATTCAAAGAAATCAGGAGGTGGAAGAGAGAGCTGGAAA-CTC-CTTG----TCTATCCGCTGGTCATATCCAGACTACTTTCGACATCAGTGG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 55110 142 + 111706 TGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAAAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAAA-CTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTCGACATCAGCGG- i rheMac3.chrUn_JH291127 I 13 C 0 s macFas5.chr2 98131 142 + 192460366 TGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGTTGGAAA-CTC-CTTG----TCTGTCCACTGGTCATATCCAAACCACTCTCGATATCAGCAG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86121 142 - 187378091 TGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAGAGAGCTGGAAA-CTC-CTTG----TCTGTCCGCTGGTCATATCCAAACCACTCTGGACATCAGCGG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 433874 141 - 91754291 TGAAAAGAGAAGGCAGGGGTGGTTCTTACAGTAAGAGAACAGCAGAGTCAAAGAGATTCAAAGAAATCAGGAGCTGGAAGAG-GAGCTGGAAA-CTC-CGTG----TCTGTCCGCTGGTCATATCCAAACCACTCTCGACATCAGCGG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 956359 142 - 74750902 TGAACAGAGAAGGCAGGGGTGGCTCTTACAGT---AGAACAGCAGAGTTAGAGAGATTCAGAGAAATCAGGAGCTGGAAGA--GAGCTAGAAACCTC-CTTGTCCATCTGTCTACTGGTCACGTCCAAGGCACTCTCCACATAAGAGG- i calJac3.chr17 C 0 I 303 s canFam3.chr33 29084745 127 + 31377067 -TAGGAGAGAAGATTGCAGTGGGTCTTATTATCTGAAAGTAGCA------AACAGTGTCACAGATTTCAGGAGATGGAAGA----------AA-CTCTCTCA----TCCATCTTCTGCTCAAACCCAAACTGCTCCCGACAATAAGAAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=63137.000000 s hg38.chr3_KI270935v1_alt 148383 42 + 197351 TTTTCGATTGCGGCACAAAGGAGGGTGAGCCTGTCACCCACC s nomLeu3.chr11 120909463 42 + 123690457 TTTTCGATTGGGGCACACAGGAGAGTGAGCCTGTCACCCACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 55252 42 + 111706 TTTTCGACTGGGGCAGAGAGTGGGGTGAGCCTGTCACCCACC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 98273 42 + 192460366 TTTTCGACTGGGGCAGAGAGTGGGGTGAGCCTGTCACCCACC i macFas5.chr2 C 0 I 147 s papAnu2.chr2 86263 42 - 187378091 GTTTCGACTGGGGCAGAGAGTGGGGTGAGCCTGTCACCCACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 434015 40 - 91754291 GTTTCGACTGGGGC--AGAGTGGGGTAAGCCTGTCGCCCACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 956804 40 - 74750902 TTTTCTACGGGGGCAGGGAGGAGGGTG-GCCTGTCACCCCC- i calJac3.chr17 I 303 C 0 s canFam3.chr33 29084872 42 + 31377067 CAGTCCTCTGGGGTAGAGTGGATGGTCCGCCTGTCACTCTCC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=296732.000000 s hg38.chr3_KI270935v1_alt 148425 178 + 197351 ACACCCA---TCACCTCCTCCCCTGTGGGACCTGACACGGCCCCACCAGGTAATGCGAATGCACCAGTGTT-CTCAGGTACTCCT-TAGGCTGAATTCCGCC-AAGGGGCCCACTGGGAGACATAAAGG--CGAGGCAGTTGGCAGCTACCTGATGTTTCCATCTTCAGAGGGGAGTCCGAGGATA s nomLeu3.chr11 120909505 178 + 123690457 ACACCCA---TCGCCTCCTCCCCTGTGGGACCTGACTCAGCCACACCAGGTAATGCGAATGCACCAGTGTT-CTCAGGTACTCCT-GAGGCTGAATTCCACC-AAGGGGCCCACTGGGAGAGATGAAGA--CGAGGCAGATGGCAGTTACCTGATGTTTCCTTCTTCAGAGGGGAGCCCGAGGATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 55294 178 + 111706 ACACCCA---TCACCTCCTCCTCTGTGGGACCTGACTCAGTCCCACCGGATAATGTGAATGCGCCAGTGTT-CTCAAGTACTCCT-TAGGCTGAATTCAGCC-AAGGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 98462 178 + 192460366 ACACCCA---TCACCTCCTCCTCTGTGGGACCTGACTCAGTCCCACCGGATAATGTGAATGTGCCAGTGTT-CTCAAGTACTCCT-TAGGCTGAATTCAGCC-AAGGGGGCCACTGGGAGAGATGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGTGGAGCCCGAGGATA i macFas5.chr2 I 147 C 0 s papAnu2.chr2 86305 178 - 187378091 ACACCCA---TCACCTCCTCCTCTGTGGGACCTGACTCAGTCCCACCGGATAATATGAATGCGCCAGTGTT-CTCAAGTACTCCT-TAGGCTGAATTCAGCC-AAGGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 434055 178 - 91754291 ACACCCA---TCACCTCCTCCTCTGTGGGACCTGACTCAGTCCCACCGGATACTGTGAATGCGCCAGTGTT-CTCCAGTACTCCT-TAGGCCGAATTCAGCC-AAGGGGGCCACTGGGAGAGACGAAGA--CAAGGCAGATGGCAGCTACCTGATGTTTCCGTCTTCAGAGGGGAGCCCGAGGATA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 956844 170 - 74750902 ACACCCA---TCGCCTCCTCCTCTGTGGGCCCTAACCCGGCCCCACCAGGT------AATTCACCAGTGCT-GGCAAGCACTC----AGGCTGGATTGAACCTAGGGGGGTCAGTGGGAGAGACGAAGG--CAAGGAAGGGGGCCGCTACCAGGTGCTTCCGTCTTCCGAGCTGCGCCCGAGGACA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29084914 175 + 31377067 ACACTCGCACTCAATTCGTCTTCTAGTGGAACTG--------CCCTCAAACTAGGCGAACGCACCATCATCGCTCAAGCCCTCCTCTAGGTCGAACTGAACG-AATGAGGCCACAGTGAGAGACAAATATCCCGGACTCCCGGC--CTACCTGACGTCTGAGTGCTCAGAGTGCGGCTGGAGAATG i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=12185.000000 s hg38.chr3_KI270935v1_alt 148603 7 + 197351 CTGTGGA s nomLeu3.chr11 120909683 7 + 123690457 CTGTAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 55472 7 + 111706 CTGTGGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86483 7 - 187378091 CTGTGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 434233 7 - 91754291 CTGTGGA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29085089 7 + 31377067 CTGTTGA i canFam3.chr33 C 0 I 529 e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957014 0 - 74750902 C e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=48133.000000 s hg38.chr3_KI270935v1_alt 148610 46 + 197351 AGCTGAGGTAGCACTGCTGACAGCAAGAGGGGTGGTGTGACCTGTG s nomLeu3.chr11 120909690 46 + 123690457 TGCTGAGGAAGTGCTTCTGACAGGAAGAGAGGTGCTGTGACCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 55479 46 + 111706 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i rheMac3.chrUn_JH291127 C 0 I 620 s macFas5.chr2 98647 46 + 192460366 TGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86490 46 - 187378091 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 434240 46 - 91754291 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTG i chlSab2.chr15 C 0 I 620 e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=793.000000 s hg38.chr3_KI270935v1_alt 148656 3 + 197351 GAT s nomLeu3.chr11 120909736 3 + 123690457 GAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98693 3 + 192460366 AAT i macFas5.chr2 C 0 T 56 s papAnu2.chr2 86536 3 - 187378091 AGT i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=29.000000 s hg38.chr3_KI270935v1_alt 148659 1 + 197351 A s nomLeu3.chr11 120909739 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86539 1 - 187378091 A i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=1301.000000 s hg38.chr3_KI270935v1_alt 148660 17 + 197351 CTGAGGAAAGGCTGGTG s nomLeu3.chr11 120909740 17 + 123690457 CTGAGGAAGTGCTGGTG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199792512 1364 + 202329955 M a score=14474.000000 s hg38.chr3_KI270935v1_alt 148677 74 + 197351 ACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGT s panTro4.chr3 199793876 71 + 202329955 ACAGGAAGAGGAGTGGCTT-ACCTGTGGATACTGAGGAAGTATCCGT-ACAGGAAGAGGGGTG-TGTCACCTGT i panTro4.chr3 M 1364 I 693 s nomLeu3.chr11 120909757 74 + 123690457 ACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGAGGTGCTGTGACCTGT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=7386.000000 s hg38.chr3_KI270935v1_alt 148751 92 + 197351 GGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGCGTGGCGTGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s nomLeu3.chr11 120909831 92 + 123690457 GGATGCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATGCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=11373.000000 s hg38.chr3_KI270935v1_alt 148843 52 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGACCTGT s nomLeu3.chr11 120909923 52 + 123690457 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGGGTGGCCTGT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86483 52 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGT i papAnu2.chr2 T 57 T 52 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=3415.000000 s hg38.chr3_KI270935v1_alt 148895 44 + 197351 AGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTGAC s nomLeu3.chr11 120909975 44 + 123690457 GGATTCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGATGTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957014 0 - 74750902 C e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86535 52 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=21011.000000 s hg38.chr3_KI270935v1_alt 148939 52 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGT s nomLeu3.chr11 120910019 52 + 123690457 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTGACCTGT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86483 52 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGT i papAnu2.chr2 T 52 T 48 s calJac3.chr17 957014 52 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGT i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=1353.000000 s hg38.chr3_KI270935v1_alt 148991 3 + 197351 AGA s nomLeu3.chr11 120910071 3 + 123690457 GGA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86487 3 - 187378091 GGA i papAnu2.chr2 T 48 C 0 s calJac3.chr17 957066 3 - 74750902 GGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=9461.000000 s hg38.chr3_KI270935v1_alt 148994 49 + 197351 TGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s nomLeu3.chr11 120910074 49 + 123690457 TGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86490 49 - 187378091 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 C 0 T 54 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=3017.000000 s hg38.chr3_KI270935v1_alt 149043 42 + 197351 GCTGAGGAAGGGCTGGTGACAGGAACAGGGGTGGCGTGACCG s nomLeu3.chr11 120910123 42 + 123690457 GCTGAGGAAGCACTGGTGACAGGAAGAGAGGTGGTGTGACCT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=11730.000000 s hg38.chr3_KI270935v1_alt 149085 54 + 197351 GTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s nomLeu3.chr11 120910165 54 + 123690457 GTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86485 54 - 187378091 GTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 54 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=20137.000000 s hg38.chr3_KI270935v1_alt 149139 280 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAATGTCGGTGACAGGAAGACGGGTGGTGTCACCTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGCACAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGTGTCAC s nomLeu3.chr11 120910219 280 + 123690457 GCTGAGGACGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGACGTGTCAGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGAAGTGATGTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=23202.000000 s hg38.chr3_KI270935v1_alt 149419 57 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACATGAAGAGGGGTGGCATGACCTGTGGATA s nomLeu3.chr11 120910499 57 + 123690457 CTGTGGATGCTGAGGAAGCACTGGTGACAGGAAGAGAAGTGGTGTGACCTGTGGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 56 T 57 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=10366.000000 s hg38.chr3_KI270935v1_alt 149476 143 + 197351 CTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATGATGAGGAAGTGTCGGTGACAAGAAGAGAGGTGGTGTCACCTGTGGATGCTGAGGAAGTCTCGGTGACAGGAAGAGAGGTGGCATGACCGGTGGAT s nomLeu3.chr11 120910556 143 + 123690457 CTGAGGAAGCGCTGGTGACAGGAAGAGGGGTGATGTGACCTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGGGTGGCCTGTGGATTCTGAGGAAGCATCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGAT i nomLeu3.chr11 C 0 M 3534 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199793947 693 + 202329955 I a score=0.000000 s hg38.chr3_KI270935v1_alt 149619 65 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGT e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199793947 693 + 202329955 I a score=2003.000000 s hg38.chr3_KI270935v1_alt 149684 23 + 197351 GACAGGAAGAGGGGTGGCCTGAC s panTro4.chr3 199794640 23 + 202329955 GACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 I 693 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23147.000000 s hg38.chr3_KI270935v1_alt 149707 56 + 197351 CTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGAT s panTro4.chr3 199794663 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 57 T 56 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 57 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1488.000000 s hg38.chr3_KI270935v1_alt 149763 23 + 197351 GCTGAGGAAGGGCTAGTGACAGG s panTro4.chr3 199794719 23 + 202329955 ACTGAGGAAGCGTCGGTGACAGG i panTro4.chr3 C 0 T 672 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5854.000000 s hg38.chr3_KI270935v1_alt 149786 68 + 197351 AAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTG s panTro4.chr3 199794070 68 + 202329955 AAGAGGGGTGGTGTCACCTGTGGGTACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTG i panTro4.chr3 T 672 T 191 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3487.000000 s hg38.chr3_KI270935v1_alt 149854 45 + 197351 TGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199793947 45 + 202329955 TGGATGCTGAGGAAGCGTCGGTGACAGAAGAGGGGGTGTTGTCAC i panTro4.chr3 T 191 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19354.000000 s hg38.chr3_KI270935v1_alt 149899 48 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGCGGTGGCCTGAC s panTro4.chr3 199793992 48 + 202329955 CTGTGGATGCTGAGGAAGGGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 s papAnu2.chr2 86483 48 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3825.000000 s hg38.chr3_KI270935v1_alt 149947 8 + 197351 CTGTGGAT s panTro4.chr3 199794040 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4633.000000 s hg38.chr3_KI270935v1_alt 149955 22 + 197351 GCTGAGGAAGTGTCGGTGACAG s panTro4.chr3 199794048 22 + 202329955 ACTGAGGAAGTGTCGGTGACAG i panTro4.chr3 C 0 I 191 s macFas5.chr2 98648 22 + 192460366 GCTGAGAAAGCACCCGTGACAG i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5857.000000 s hg38.chr3_KI270935v1_alt 149977 26 + 197351 GAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199794261 26 + 202329955 GAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 I 191 C 0 s macFas5.chr2 98670 26 + 192460366 GAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1752.000000 s hg38.chr3_KI270935v1_alt 150003 23 + 197351 GCTGAGGAAGGGCTAGTGACAGG s panTro4.chr3 199794287 23 + 202329955 GCTGAGGAAGAGATGGTGACAGG i panTro4.chr3 C 0 T 240 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1412.000000 s hg38.chr3_KI270935v1_alt 150026 17 + 197351 AAGAGGCGTGGTGTCAC s panTro4.chr3 199794070 17 + 202329955 AAGAGGGGTGGTGTCAC i panTro4.chr3 T 240 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23708.000000 s hg38.chr3_KI270935v1_alt 150043 56 + 197351 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794087 56 + 202329955 CTGTGGGTACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 54 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 56 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10728.000000 s hg38.chr3_KI270935v1_alt 150099 138 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCGGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACTG s panTro4.chr3 199794143 138 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCACCT i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 54 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9583.000000 s hg38.chr3_KI270935v1_alt 150237 46 + 197351 GTGGATGCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794281 46 + 202329955 GTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98642 46 + 192460366 GTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 54 I 8 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6198.000000 s hg38.chr3_KI270935v1_alt 150283 12 + 197351 CTGTGGATGCTG s panTro4.chr3 199794327 12 + 202329955 CTGTGGATGCTG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86483 12 - 187378091 CTGTGGATGCTG i papAnu2.chr2 T 56 C 0 s calJac3.chr17 957014 12 - 74750902 CTGTGGGTGCCG i calJac3.chr17 T 55 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98688 8 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2910.000000 s hg38.chr3_KI270935v1_alt 150295 3 + 197351 AGG s panTro4.chr3 199794339 3 + 202329955 AGG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98696 3 + 192460366 AGG i macFas5.chr2 I 8 T 44 s papAnu2.chr2 86495 3 - 187378091 AGG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957026 3 - 74750902 AGG i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23857.000000 s hg38.chr3_KI270935v1_alt 150298 40 + 197351 AAGTGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA s panTro4.chr3 199794342 40 + 202329955 AAGAGATGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98655 40 + 192460366 AAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 44 C 0 s papAnu2.chr2 86498 40 - 187378091 ATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957029 40 - 74750902 CGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270935v1_alt 150338 1 + 197351 T s panTro4.chr3 199794382 1 + 202329955 T i panTro4.chr3 C 0 C 0 s macFas5.chr2 98695 1 + 192460366 T i macFas5.chr2 C 0 T 56 s papAnu2.chr2 86538 1 - 187378091 T i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3472.000000 s hg38.chr3_KI270935v1_alt 150339 40 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794383 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=35993.000000 s hg38.chr3_KI270935v1_alt 150379 55 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGA s panTro4.chr3 199794423 55 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGAAAGAGGGGTGGTGTCACCTGTGGA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 55 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAG i papAnu2.chr2 T 56 C 0 s calJac3.chr17 957014 55 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 T 55 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270935v1_alt 150434 2 + 197351 TA s panTro4.chr3 199794478 2 + 202329955 TA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86538 2 - 187378091 TA i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8008.000000 s hg38.chr3_KI270935v1_alt 150436 39 + 197351 CTGAGGAAGCGTCGGTGACAGGAACAGGGGTGGCGTGAC s panTro4.chr3 199794480 39 + 202329955 CTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4191.000000 s hg38.chr3_KI270935v1_alt 150475 8 + 197351 CTGTGGAT s panTro4.chr3 199794519 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18709.000000 s hg38.chr3_KI270935v1_alt 150483 48 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCATGACCTGTGGAT s panTro4.chr3 199794527 48 + 202329955 ACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 s papAnu2.chr2 86491 48 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1735.000000 s hg38.chr3_KI270935v1_alt 150531 22 + 197351 GCTGAGGAAGTGTCGGTGACAG s panTro4.chr3 199794575 22 + 202329955 ACTGAGGAAGCATCGGTGACAG i panTro4.chr3 C 0 T 623 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 150553 1 + 197351 G e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794597 623 + 202329955 T a score=1298.000000 s hg38.chr3_KI270935v1_alt 150554 18 + 197351 AAGAGGGCGTGGTGTCAC s panTro4.chr3 199793974 18 + 202329955 AAGAGGGGGTGTTGTCAC i panTro4.chr3 T 623 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12525.000000 s hg38.chr3_KI270935v1_alt 150572 56 + 197351 CTGTGGATGCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199793992 56 + 202329955 CTGTGGATGCTGAGGAAGGGATGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1988.000000 s hg38.chr3_KI270935v1_alt 150628 22 + 197351 GCTGAGGAAGTGTCGGTGACAG s panTro4.chr3 199794048 22 + 202329955 ACTGAGGAAGTGTCGGTGACAG i panTro4.chr3 C 0 I 815 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1093.000000 s hg38.chr3_KI270935v1_alt 150650 14 + 197351 GAAGAGGGGTGGTT s panTro4.chr3 199794885 14 + 202329955 GAAGAGGGGTGATC i panTro4.chr3 I 815 T 285 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 150664 5 + 197351 GTCAC e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794899 285 + 202329955 T a score=100.000000 s hg38.chr3_KI270935v1_alt 150669 1 + 197351 C s panTro4.chr3 199794614 1 + 202329955 C i panTro4.chr3 T 285 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=18237.000000 s hg38.chr3_KI270935v1_alt 150670 44 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGCGGTGGCG s panTro4.chr3 199794615 44 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCG i panTro4.chr3 C 0 I 240 s macFas5.chr2 98640 44 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCG i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 44 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCA i papAnu2.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5302.000000 s hg38.chr3_KI270935v1_alt 150714 12 + 197351 TGACCTGTGGAT s panTro4.chr3 199794899 12 + 202329955 TCACCTGTGGAT i panTro4.chr3 I 240 C 0 s macFas5.chr2 98684 12 + 192460366 TGACCTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86527 12 - 187378091 TGACCTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=9160.000000 s hg38.chr3_KI270935v1_alt 150726 48 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199794911 48 + 202329955 GCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3033.000000 s hg38.chr3_KI270935v1_alt 150774 40 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro4.chr3 199794959 40 + 202329955 ACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=24074.000000 s hg38.chr3_KI270935v1_alt 150814 56 + 197351 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794999 56 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 54 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 56 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10728.000000 s hg38.chr3_KI270935v1_alt 150870 138 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACCGGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGCGGGGTGGCGTGACTG s panTro4.chr3 199795055 138 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCACCT i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 54 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5459.000000 s hg38.chr3_KI270935v1_alt 151008 28 + 197351 GTGGATGCTGAGGAAGGGCTGGTGACAT s panTro4.chr3 199795193 28 + 202329955 GTGGATGCTGAGGAAGAGATGGTGACAG i panTro4.chr3 C 0 T 624 s macFas5.chr2 98642 28 + 192460366 GTGGATGCTGAGAAAGCACCCGTGACAG i macFas5.chr2 T 54 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3836.000000 s hg38.chr3_KI270935v1_alt 151036 18 + 197351 GAAGAGGGGTGGCGTGAC s panTro4.chr3 199794597 18 + 202329955 GAAGAGGGGTGGTGTCAC i panTro4.chr3 T 624 C 0 s macFas5.chr2 98670 18 + 192460366 GAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10650.000000 s hg38.chr3_KI270935v1_alt 151054 48 + 197351 CTGTGGATATTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794615 48 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10246.000000 s hg38.chr3_KI270935v1_alt 151102 48 + 197351 CTATGGATGCTGAGGAAGTGTCGGTGACAGGAAGAAGGGTGGCGTGAC s panTro4.chr3 199794663 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23147.000000 s hg38.chr3_KI270935v1_alt 151150 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794711 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 56 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6899.000000 s hg38.chr3_KI270935v1_alt 151206 40 + 197351 GCTGAGGAAGTGTCGGTGTCAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794767 40 + 202329955 GCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGATGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11791.000000 s hg38.chr3_KI270935v1_alt 151246 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794807 56 + 202329955 CGCTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10594.000000 s hg38.chr3_KI270935v1_alt 151302 136 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGCGTGGTGTCAC s panTro4.chr3 199794863 136 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATCTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10564.000000 s hg38.chr3_KI270935v1_alt 151438 48 + 197351 CTGTGGATACTGAGGAAAGGCTGGTGAGAGGAAGAGGGGTAGCGTGAC s panTro4.chr3 199794999 48 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11063.000000 s hg38.chr3_KI270935v1_alt 151486 48 + 197351 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795047 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=12707.000000 s hg38.chr3_KI270935v1_alt 151534 57 + 197351 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACA s panTro4.chr3 199795095 57 + 202329955 CTGTGGATGCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8422.000000 s hg38.chr3_KI270935v1_alt 151591 39 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795152 39 + 202329955 CTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4191.000000 s hg38.chr3_KI270935v1_alt 151630 8 + 197351 CTGTGGAT s panTro4.chr3 199795191 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=14945.000000 s hg38.chr3_KI270935v1_alt 151638 40 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795199 40 + 202329955 GCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=23260.000000 s hg38.chr3_KI270935v1_alt 151678 56 + 197351 CTGTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199795239 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3472.000000 s hg38.chr3_KI270935v1_alt 151734 40 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199795295 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=37657.000000 s hg38.chr3_KI270935v1_alt 151774 55 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCATGACCTGTGGA s panTro4.chr3 199795335 55 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 55 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAA i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 55 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAG i papAnu2.chr2 T 56 C 0 s calJac3.chr17 957014 55 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 T 55 T 59 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1092.000000 s hg38.chr3_KI270935v1_alt 151829 2 + 197351 TA s panTro4.chr3 199795390 2 + 202329955 TA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98695 2 + 192460366 TA i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86538 2 - 187378091 TA i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 59 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8391.000000 s hg38.chr3_KI270935v1_alt 151831 37 + 197351 CTGAGGAAGCGTCGGTGACAGGAACAGGGGTGGCGTG s panTro4.chr3 199795392 37 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTG i panTro4.chr3 C 0 T 1152 s macFas5.chr2 98649 37 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTG i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 59 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2603.000000 s hg38.chr3_KI270935v1_alt 151868 10 + 197351 ACCTGTGGAT s panTro4.chr3 199794277 10 + 202329955 ACCTGTGGAT i panTro4.chr3 T 1152 C 0 s macFas5.chr2 98686 10 + 192460366 ACCTGTGAAT i macFas5.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 59 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2142.000000 s hg38.chr3_KI270935v1_alt 151878 28 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAG s panTro4.chr3 199794287 28 + 202329955 GCTGAGGAAGAGATGGTGACAGGAAGAG i panTro4.chr3 C 0 I 157 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 59 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 151906 9 + 197351 GGGTGGCAT e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 59 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794315 157 + 202329955 I a score=177.000000 s hg38.chr3_KI270935v1_alt 151915 4 + 197351 GACC s calJac3.chr17 957010 4 - 74750902 GACA i calJac3.chr17 T 59 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794315 157 + 202329955 I a score=600.000000 s hg38.chr3_KI270935v1_alt 151919 1 + 197351 C s macFas5.chr2 98640 1 + 192460366 C i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 1 - 187378091 C i papAnu2.chr2 T 57 C 0 s calJac3.chr17 957014 1 - 74750902 C i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794315 157 + 202329955 I a score=29427.000000 s hg38.chr3_KI270935v1_alt 151920 47 + 197351 TGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794472 47 + 202329955 TGTGGATACTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 I 157 C 0 s macFas5.chr2 98641 47 + 192460366 TGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86484 47 - 187378091 TGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957015 47 - 74750902 TGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGC i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5718.000000 s hg38.chr3_KI270935v1_alt 151967 7 + 197351 CTGTGGA s panTro4.chr3 199794519 7 + 202329955 CTGTGGA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 7 - 187378091 CTGTGAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957062 7 - 74750902 CTGTGGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=546.000000 s hg38.chr3_KI270935v1_alt 151974 1 + 197351 T s panTro4.chr3 199794526 1 + 202329955 T i panTro4.chr3 C 0 C 0 s macFas5.chr2 98647 1 + 192460366 T i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86538 1 - 187378091 T i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2494.000000 s hg38.chr3_KI270935v1_alt 151975 15 + 197351 GCTGAGGAAGTGTCA s panTro4.chr3 199794527 15 + 202329955 ACTGAGGAAGTGTCG i panTro4.chr3 C 0 T 144 s macFas5.chr2 98648 15 + 192460366 GCTGAGAAAGCACCC i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5828.000000 s hg38.chr3_KI270935v1_alt 151990 25 + 197351 GTGACAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199794398 25 + 202329955 GTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 T 144 C 0 s macFas5.chr2 98663 25 + 192460366 GTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4191.000000 s hg38.chr3_KI270935v1_alt 152015 8 + 197351 CTGTGGAT s panTro4.chr3 199794423 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15020.000000 s hg38.chr3_KI270935v1_alt 152023 40 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794431 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGAAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=3825.000000 s hg38.chr3_KI270935v1_alt 152063 8 + 197351 CTGTGGAT s panTro4.chr3 199794471 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10004.000000 s hg38.chr3_KI270935v1_alt 152071 48 + 197351 GCTGAGGAAGTGTCAGTGACAGGAAGAGAGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794479 48 + 202329955 ACTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=7267.000000 s hg38.chr3_KI270935v1_alt 152119 88 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794527 88 + 202329955 ACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGCATCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10025.000000 s hg38.chr3_KI270935v1_alt 152207 48 + 197351 CTGTGGATAATGAGGAAGCATCGGTGACATGAAGAGCGGTGGCGTGAC s panTro4.chr3 199794615 48 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6925.000000 s hg38.chr3_KI270935v1_alt 152255 30 + 197351 CTGTGGATACTGAGGAAGCGTCGGTGACAA s panTro4.chr3 199794663 30 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAG i panTro4.chr3 C 0 I 96 s macFas5.chr2 98640 30 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAG i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4540.000000 s hg38.chr3_KI270935v1_alt 152285 27 + 197351 GAAGAGAGGTGGCGTGACCTGTGGATA s panTro4.chr3 199794789 27 + 202329955 GAAGAGACGTGATGTCACCGCTGGATA i panTro4.chr3 I 96 C 0 s macFas5.chr2 98670 27 + 192460366 GAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=10199.000000 s hg38.chr3_KI270935v1_alt 152312 47 + 197351 CTGAGGAAGCGTCGGTGACAAGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199794816 47 + 202329955 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=2353.000000 s hg38.chr3_KI270935v1_alt 152359 38 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTC s panTro4.chr3 199794863 38 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATCTC i panTro4.chr3 C 0 I 379 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 152397 43 + 197351 ACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTG e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199794901 379 + 202329955 I a score=2609.000000 s hg38.chr3_KI270935v1_alt 152440 45 + 197351 TCCTGACCTGTGGATGCTGAGGAAGTATCGGTGACAGGAAGCGGT s panTro4.chr3 199795280 45 + 202329955 GTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAG i panTro4.chr3 I 379 T 1181 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 152485 22 + 197351 GTGGTGTCACCAGTGGATGATG e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M e panTro4.chr3 199795325 1181 + 202329955 T a score=2951.000000 s hg38.chr3_KI270935v1_alt 152507 39 + 197351 CTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794144 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panTro4.chr3 T 1181 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=19907.000000 s hg38.chr3_KI270935v1_alt 152546 31 + 197351 CTGTGGATGCTGAGGAAGGGCTGGTGACAGT s panTro4.chr3 199794183 31 + 202329955 CTGTGGATGCTGAGGAAGGGCTGGTGACAGG i panTro4.chr3 C 0 T 144 s macFas5.chr2 98640 31 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGG i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 31 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGC i papAnu2.chr2 T 56 C 0 s calJac3.chr17 957014 31 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGC i calJac3.chr17 T 55 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=11398.000000 s hg38.chr3_KI270935v1_alt 152577 17 + 197351 AAGAGGGGTGGCGTGAC s panTro4.chr3 199794070 17 + 202329955 AAGAGGGGTGGTGTCAC i panTro4.chr3 T 144 C 0 s macFas5.chr2 98671 17 + 192460366 AAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86514 17 - 187378091 AAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957045 17 - 74750902 AAGAGGGGCCGCGTGGC i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5483.000000 s hg38.chr3_KI270935v1_alt 152594 7 + 197351 CTGTGGA s panTro4.chr3 199794087 7 + 202329955 CTGTGGG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 7 + 192460366 CTGTGGA i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 7 - 187378091 CTGTGAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957062 7 - 74750902 CTGTGGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=726.000000 s hg38.chr3_KI270935v1_alt 152601 2 + 197351 TA s panTro4.chr3 199794094 2 + 202329955 TA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98647 2 + 192460366 TG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86538 2 - 187378091 TA i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=15890.000000 s hg38.chr3_KI270935v1_alt 152603 40 + 197351 CTGAGGAAGCATTGGTGACAGGAAGAGGGGTGGCCTGACC s panTro4.chr3 199794096 40 + 202329955 CTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 40 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACC i macFas5.chr2 C 0 I 10 s papAnu2.chr2 86492 40 - 187378091 CTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACC i papAnu2.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=1486.000000 s hg38.chr3_KI270935v1_alt 152643 7 + 197351 TGTGGAT s panTro4.chr3 199794136 7 + 202329955 TGTGGAT i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86532 7 - 187378091 TGTGAGT i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=8068.000000 s hg38.chr3_KI270935v1_alt 152650 40 + 197351 GCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGAC s panTro4.chr3 199794143 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=20828.000000 s hg38.chr3_KI270935v1_alt 152690 48 + 197351 CTGTGGATGCTGAGGAAGGGCTGGTGACAGTAAGAGGGGTGGCGTGAC s panTro4.chr3 199794183 48 + 202329955 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86483 48 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 48 T 48 s calJac3.chr17 957014 48 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGC i calJac3.chr17 T 55 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=4038.000000 s hg38.chr3_KI270935v1_alt 152738 7 + 197351 CTGTGGA s panTro4.chr3 199794231 7 + 202329955 CTGTGGA i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86483 7 - 187378091 CTGTGGA i papAnu2.chr2 T 48 C 0 s calJac3.chr17 957062 7 - 74750902 CTGTGGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=6791.000000 s hg38.chr3_KI270935v1_alt 152745 37 + 197351 TGCTGAGGAAGCGCTGGTGACAGGAAGAGGGGTGGCC s panTro4.chr3 199794238 37 + 202329955 TACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86490 37 - 187378091 TGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCA i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120910699 3534 + 123690457 M a score=5442.000000 s hg38.chr3_KI270935v1_alt 152782 12 + 197351 TGACCTGTGGAT s panTro4.chr3 199794275 12 + 202329955 TCACCTGTGGAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914255 12 + 123690457 TGACCTGTGGAT i nomLeu3.chr11 M 3534 C 0 s papAnu2.chr2 86527 12 - 187378091 TGACCTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=300.000000 s hg38.chr3_KI270935v1_alt 152794 1 + 197351 G s panTro4.chr3 199794287 1 + 202329955 G i panTro4.chr3 C 0 T 218 s nomLeu3.chr11 120914267 1 + 123690457 G i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1783.000000 s hg38.chr3_KI270935v1_alt 152795 22 + 197351 CTGAGGAAGTGTCGGTGACAGG s nomLeu3.chr11 120914268 22 + 123690457 CTGAGGACGTGTCAGTGACAGG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e panTro4.chr3 199794288 218 + 202329955 T a score=15280.000000 s hg38.chr3_KI270935v1_alt 152817 65 + 197351 AAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGCTGGTGAGAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199794070 65 + 202329955 AAGAGGGGTGGTGTCACCTGTGGGTACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 T 218 C 0 s nomLeu3.chr11 120914290 65 + 123690457 AAGAGGGGTGGTGTGACCTGTGGATGCTGAGGACGTGTCAGTGACAGGAAGAGGGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=12223.000000 s hg38.chr3_KI270935v1_alt 152882 17 + 197351 CTGTGGATGCTGAGGAA s panTro4.chr3 199794135 17 + 202329955 CTGTGGATACTGAGGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914355 17 + 123690457 CTGTGGATGTTGAGGAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86483 17 - 187378091 CTGTGGATGCTGAGGAT i papAnu2.chr2 T 56 C 0 s calJac3.chr17 957014 17 - 74750902 CTGTGGGTGCCGAGGCG i calJac3.chr17 T 55 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98689 10 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=14684.000000 s hg38.chr3_KI270935v1_alt 152899 17 + 197351 GTGCTGGTGACAGGAAG s panTro4.chr3 199794152 17 + 202329955 GCGTCGGTGACAGGAAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914372 17 + 123690457 GTGCTGGTGACAGGAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98699 17 + 192460366 GTGGTGGAGAAAGAAAG i macFas5.chr2 I 10 T 76 s papAnu2.chr2 86500 17 - 187378091 GCGCTGCTGACGGCAAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957031 17 - 74750902 GTGCTGGTGACAGCAAG i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=15054.000000 s hg38.chr3_KI270935v1_alt 152916 21 + 197351 AGGGGTGGCGTGACCTGTGGA s panTro4.chr3 199794169 21 + 202329955 AGGGTTGGCGTGACCTGTGGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914389 21 + 123690457 AGAGGTGGTGTGACCTGTGGA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86517 21 - 187378091 AGGGGTGGCATGACCTGTGAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 957048 21 - 74750902 AGGGGCCGCGTGGCCTGTGGA i calJac3.chr17 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=546.000000 s hg38.chr3_KI270935v1_alt 152937 1 + 197351 T s panTro4.chr3 199794190 1 + 202329955 T i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914410 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86538 1 - 187378091 T i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=21458.000000 s hg38.chr3_KI270935v1_alt 152938 49 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199794191 49 + 202329955 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914411 49 + 123690457 GCTGAGGACGTGTCAGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86491 49 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=15290.000000 s hg38.chr3_KI270935v1_alt 152987 39 + 197351 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCATGAC s panTro4.chr3 199794240 39 + 202329955 CTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914460 39 + 123690457 TTGAGGAAGTGCTGATGACAGGAAGAGAGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86492 39 - 187378091 CTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=24802.000000 s hg38.chr3_KI270935v1_alt 153026 57 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199794279 57 + 202329955 CTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914499 57 + 123690457 CTGTGGATGCTGAGGAAGTGTCACTGACAGGAAGAGGGGTGGTGTGACCTGTGGATG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 48 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=9522.000000 s hg38.chr3_KI270935v1_alt 153083 39 + 197351 CTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199794336 39 + 202329955 CTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914556 39 + 123690457 CTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGTGTGAC i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=25083.000000 s hg38.chr3_KI270935v1_alt 153122 56 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGAT s panTro4.chr3 199794375 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914595 56 + 123690457 CTGTGGATGCTGAGGAAGCGCTGGTGACAGGAAGAGAGGTGGTGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 57 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=31111.000000 s hg38.chr3_KI270935v1_alt 153178 132 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTAGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTG s panTro4.chr3 199794431 132 + 202329955 ACTGAGGAAGCGTCGGTGACAGAAAGAGGGGTGGTGTCACCTGTGGATACTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914651 132 + 123690457 GCTGAGGACGTGTCAGTGGCAGGAAGAGAACTGGTGTGACCTGTGGATGCTGAGGACGTGTCAGTGACAGGAAGAGAGGTGGTGTGACCTGTGGATGCTGAGGAAGTGCTGGTGACAGGAGGAGAGGTGGTG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2603.000000 s hg38.chr3_KI270935v1_alt 153310 34 + 197351 TCACCTGTGGATAATGAGGAAGCATCGGTGACAT s panTro4.chr3 199794563 34 + 202329955 TGACCTGTGGATACTGAGGAAGCATCGGTGACAG i panTro4.chr3 C 0 I 304 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=0.000000 s hg38.chr3_KI270935v1_alt 153344 16 + 197351 GAAGAAGGGTGGCGTG e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C e panTro4.chr3 199794597 304 + 202329955 I a score=7951.000000 s hg38.chr3_KI270935v1_alt 153360 98 + 197351 ACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGGGTGGTGTCATCTGTGGACACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGTGTCAC s panTro4.chr3 199794901 98 + 202329955 ACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 I 304 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=12977.000000 s hg38.chr3_KI270935v1_alt 153458 57 + 197351 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTCACCTGTGGATA s panTro4.chr3 199794999 57 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=6019.000000 s hg38.chr3_KI270935v1_alt 153515 87 + 197351 ATGAGGAAGGGCTAGTGTCAGGAAGAGGCGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGCAGAGGGGTGGCCTGAC s panTro4.chr3 199795056 87 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98716 76 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=12793.000000 s hg38.chr3_KI270935v1_alt 153602 57 + 197351 CTGTGGATGCTGAGGAAGCATCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATA s panTro4.chr3 199795143 57 + 202329955 CTGTGGATACTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 76 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2839.000000 s hg38.chr3_KI270935v1_alt 153659 39 + 197351 CTGAGGAAAGGCTGGTGACAGGAAGAGGCGTGGTGTCAC s panTro4.chr3 199795200 39 + 202329955 CTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957069 55 - 74750902 T e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=22527.000000 s hg38.chr3_KI270935v1_alt 153698 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTAGCGTGACCTGTGGAC s panTro4.chr3 199795239 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 57 C 0 s calJac3.chr17 957014 56 - 74750902 CTGTGGGTGCCGAGGCGGTGCTGGTGACAGCAAGAGGGGCCGCGTGGCCTGTGGAC i calJac3.chr17 T 55 I 1047 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=273.000000 s hg38.chr3_KI270935v1_alt 153754 1 + 197351 A s panTro4.chr3 199795295 1 + 202329955 A i panTro4.chr3 C 0 C 0 s macFas5.chr2 98696 1 + 192460366 A i macFas5.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=3634.000000 s hg38.chr3_KI270935v1_alt 153755 39 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199795296 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=24366.000000 s hg38.chr3_KI270935v1_alt 153794 57 + 197351 CTGTGGACACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199795335 57 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 57 T 48 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 57 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=8558.000000 s hg38.chr3_KI270935v1_alt 153851 39 + 197351 ATGAGGAAGCGTCGGTGACATGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795392 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=13487.000000 s hg38.chr3_KI270935v1_alt 153890 57 + 197351 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGATA s panTro4.chr3 199795431 57 + 202329955 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10583.000000 s hg38.chr3_KI270935v1_alt 153947 47 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199795488 47 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=3481.000000 s hg38.chr3_KI270935v1_alt 153994 40 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199795535 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=12159.000000 s hg38.chr3_KI270935v1_alt 154034 57 + 197351 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGACA s panTro4.chr3 199795575 57 + 202329955 CTGTGGATACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2931.000000 s hg38.chr3_KI270935v1_alt 154091 39 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGCTGTCAC s panTro4.chr3 199795632 39 + 202329955 TTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9333.000000 s hg38.chr3_KI270935v1_alt 154130 48 + 197351 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGTC s panTro4.chr3 199795671 48 + 202329955 CTGTGGATACTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=8689.000000 s hg38.chr3_KI270935v1_alt 154178 48 + 197351 CTGTGGATGCTGAGGAAGTGTC-GGTGACAAGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795719 49 + 202329955 CTGTGGATACTGAGGAAGTGTCAAAAGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACC-CGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270935v1_alt 154226 8 + 197351 CTGTGGAT s panTro4.chr3 199795768 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=4356.000000 s hg38.chr3_KI270935v1_alt 154234 10 + 197351 GCTGAGGAAG s panTro4.chr3 199795776 10 + 202329955 ACTGAGGAAG i panTro4.chr3 C 0 T 817 s macFas5.chr2 98648 10 + 192460366 GCTGAGAAAG i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86491 10 - 187378091 GCTGAGGATG i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9962.000000 s hg38.chr3_KI270935v1_alt 154244 30 + 197351 GGCTGGTGACAGGAAGAGGGGTGGCCTGAC s panTro4.chr3 199794969 30 + 202329955 TGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 T 817 C 0 s macFas5.chr2 98658 30 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86501 30 - 187378091 CGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=3825.000000 s hg38.chr3_KI270935v1_alt 154274 8 + 197351 CTGTGGAT s panTro4.chr3 199794999 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=15696.000000 s hg38.chr3_KI270935v1_alt 154282 40 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795007 40 + 202329955 ACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=3825.000000 s hg38.chr3_KI270935v1_alt 154322 8 + 197351 CTGTGGAT s panTro4.chr3 199795047 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10390.000000 s hg38.chr3_KI270935v1_alt 154330 48 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACTTGTGGAT s panTro4.chr3 199795055 48 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10801.000000 s hg38.chr3_KI270935v1_alt 154378 49 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGGCCTGTGGATA s panTro4.chr3 199795103 49 + 202329955 GCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 49 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=7684.000000 s hg38.chr3_KI270935v1_alt 154427 87 + 197351 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199795152 87 + 202329955 CTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10158.000000 s hg38.chr3_KI270935v1_alt 154514 48 + 197351 CTGTGGATAATGAGGAAGCATCGGTGACATGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795239 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=12775.000000 s hg38.chr3_KI270935v1_alt 154562 57 + 197351 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTAGATA s panTro4.chr3 199795287 57 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9152.000000 s hg38.chr3_KI270935v1_alt 154619 39 + 197351 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795344 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270935v1_alt 154658 8 + 197351 CTGTGGAT s panTro4.chr3 199795383 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=15917.000000 s hg38.chr3_KI270935v1_alt 154666 40 + 197351 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCATGAC s panTro4.chr3 199795391 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2892.000000 s hg38.chr3_KI270935v1_alt 154706 5 + 197351 CTGTG s panTro4.chr3 199795431 5 + 202329955 CTGTG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 5 + 192460366 CTGTG i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 5 - 187378091 CTGTG i papAnu2.chr2 C 0 T 53 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9643.000000 s hg38.chr3_KI270935v1_alt 154711 43 + 197351 GACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795436 43 + 202329955 GATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98645 43 + 192460366 GATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86536 53 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=23571.000000 s hg38.chr3_KI270935v1_alt 154754 57 + 197351 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGGTA s panTro4.chr3 199795479 57 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 53 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10304.000000 s hg38.chr3_KI270935v1_alt 154811 47 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGAGGAT s panTro4.chr3 199795536 47 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2848.000000 s hg38.chr3_KI270935v1_alt 154858 40 + 197351 GCTGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199795583 40 + 202329955 ACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=11127.000000 s hg38.chr3_KI270935v1_alt 154898 49 + 197351 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGCGTGACC s panTro4.chr3 199795623 49 + 202329955 CTGTGGATATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACC i panTro4.chr3 C 0 T 96 s macFas5.chr2 98640 49 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACC i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=573.000000 s hg38.chr3_KI270935v1_alt 154947 2 + 197351 TG s panTro4.chr3 199795576 2 + 202329955 TG i panTro4.chr3 T 96 C 0 s macFas5.chr2 98689 2 + 192460366 TG i macFas5.chr2 C 0 T 51 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2618.000000 s hg38.chr3_KI270935v1_alt 154949 45 + 197351 AGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCAC s panTro4.chr3 199795578 45 + 202329955 TGGATACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98691 51 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=23051.000000 s hg38.chr3_KI270935v1_alt 154994 57 + 197351 CTGTGGATGCTGAGGAAAGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199795623 57 + 202329955 CTGTGGATATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 51 T 57 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 57 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=5316.000000 s hg38.chr3_KI270935v1_alt 155051 61 + 197351 CTGAGGAAGCGTCGGTGACATGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGTC s panTro4.chr3 199795680 61 + 202329955 CTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAAGTGTC i panTro4.chr3 C 0 T 312 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=0.000000 s hg38.chr3_KI270935v1_alt 155112 24 + 197351 GGTGACAGGAAGAGGGGTGGTGTC e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C e panTro4.chr3 199795741 312 + 202329955 T a score=191.000000 s hg38.chr3_KI270935v1_alt 155136 2 + 197351 AC s panTro4.chr3 199795429 2 + 202329955 AC i panTro4.chr3 T 312 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=13243.000000 s hg38.chr3_KI270935v1_alt 155138 57 + 197351 CTGTGGATACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGCGTGACCTGTGGACA s panTro4.chr3 199795431 57 + 202329955 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 57 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10006.000000 s hg38.chr3_KI270935v1_alt 155195 47 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTGACCTGAAGAT s panTro4.chr3 199795488 47 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2911.000000 s hg38.chr3_KI270935v1_alt 155242 40 + 197351 GCTGAGGAAGGGATGGTGACAGGAAGAGAGGTGGTGTCAC s panTro4.chr3 199795535 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=10360.000000 s hg38.chr3_KI270935v1_alt 155282 48 + 197351 CTGTGGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199795575 48 + 202329955 CTGTGGATACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270935v1_alt 155330 8 + 197351 CTGTGGAT s panTro4.chr3 199795623 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 56 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9262.000000 s hg38.chr3_KI270935v1_alt 155338 48 + 197351 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGATGGCCTGACCTGTGGAT s panTro4.chr3 199795631 48 + 202329955 ATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86491 48 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 C 0 T 54 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=4194.000000 s hg38.chr3_KI270935v1_alt 155386 57 + 197351 GCCGAGGAAACGTCGGTGACAGGAAGACGGGTGGTGTCATCTGTGGAAGCTGAGGAA s panTro4.chr3 199795679 57 + 202329955 ACTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATACTGAGGAA i panTro4.chr3 C 0 T 1536 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=2318.000000 s hg38.chr3_KI270935v1_alt 155443 31 + 197351 AGGCCGGTGACAGGAAGTGGGGTGGCGTGAG s panTro4.chr3 199794200 31 + 202329955 GGGCTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 T 1536 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=9477.000000 s hg38.chr3_KI270935v1_alt 155474 44 + 197351 CTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCC s panTro4.chr3 199794231 44 + 202329955 CTGTGGATACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 44 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCG i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914783 0 + 123690457 C a score=1617.000000 s hg38.chr3_KI270935v1_alt 155518 4 + 197351 TGAC s panTro4.chr3 199794275 4 + 202329955 TCAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914783 4 + 123690457 TGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98684 4 + 192460366 TGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=23534.000000 s hg38.chr3_KI270935v1_alt 155522 56 + 197351 CTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGGCTGGCGTGACCTGTGGAT s panTro4.chr3 199794279 56 + 202329955 CTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914787 56 + 123690457 CTGTGGATGCTGAGGATGTGTCAGTGACAGGAGGAGAGGTGGTGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=11467.000000 s hg38.chr3_KI270935v1_alt 155578 48 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGAT s panTro4.chr3 199794335 48 + 202329955 GCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914843 48 + 123690457 GCTGAGGAAGTGCTGGTGACAGGAAGAGAGGTGGTGTGACCTGTGGAT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M a score=6313.000000 s hg38.chr3_KI270935v1_alt 155626 88 + 197351 ACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCCGAGGAAACGTCGGTGACAGGAAGATGGGTGGTGTCAT s panTro4.chr3 199794383 88 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCACCTGTGGATACTGAGGAAGCGTCGGTGACAGAAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=9507.000000 s hg38.chr3_KI270935v1_alt 155714 49 + 197351 CTGTGGAAGCTGAGGAAAGGCCGGTGACAGGAAGAGGGGTGGCGTGACG s panTro4.chr3 199794471 49 + 202329955 CTGTGGATACTGAGGGAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACC i panTro4.chr3 C 0 I 1152 s macFas5.chr2 98640 49 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACC i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2003.000000 s hg38.chr3_KI270935v1_alt 155763 8 + 197351 TGTGGATA s panTro4.chr3 199795672 8 + 202329955 TGTGGATA i panTro4.chr3 I 1152 C 0 s macFas5.chr2 98689 8 + 192460366 TGTGAATA i macFas5.chr2 C 0 T 55 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2714.000000 s hg38.chr3_KI270935v1_alt 155771 41 + 197351 CTGAGGAATTGTCGGTGACAGGAAGAGGGGTGGCATGACCG s panTro4.chr3 199795680 41 + 202329955 CTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCACCT i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 55 + 192460366 T e papAnu2.chr2 86539 54 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=7928.000000 s hg38.chr3_KI270935v1_alt 155812 18 + 197351 GTGGATGCTGAGAAAGTG s panTro4.chr3 199795721 18 + 202329955 GTGGATACTGAGGAAGTG i panTro4.chr3 C 0 T 1152 s macFas5.chr2 98642 18 + 192460366 GTGGATGCTGAGAAAGCA i macFas5.chr2 T 55 C 0 s papAnu2.chr2 86485 18 - 187378091 GTGGATGCTGAGGATGCG i papAnu2.chr2 T 54 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10501.000000 s hg38.chr3_KI270935v1_alt 155830 28 + 197351 CTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199794587 28 + 202329955 TCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 T 1152 C 0 s macFas5.chr2 98660 28 + 192460366 CCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86503 28 - 187378091 CTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270935v1_alt 155858 8 + 197351 CTGTGGAT s panTro4.chr3 199794615 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=19927.000000 s hg38.chr3_KI270935v1_alt 155866 49 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199794623 49 + 202329955 ACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 49 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 57 s papAnu2.chr2 86491 49 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3289.000000 s hg38.chr3_KI270935v1_alt 155915 39 + 197351 ATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794672 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=12005.000000 s hg38.chr3_KI270935v1_alt 155954 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAAGAAGAGGGGTGGTGTGACCTGTAGAT s panTro4.chr3 199794711 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 57 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3378.000000 s hg38.chr3_KI270935v1_alt 156010 40 + 197351 GCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794767 40 + 202329955 GCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGATGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=9772.000000 s hg38.chr3_KI270935v1_alt 156050 48 + 197351 CTTTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199794807 48 + 202329955 CGCTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3798.000000 s hg38.chr3_KI270935v1_alt 156098 8 + 197351 CTGTAGAT s panTro4.chr3 199794855 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 56 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8974.000000 s hg38.chr3_KI270935v1_alt 156106 49 + 197351 GCTGAGGAAGGGCTGGTGACAGTAAGAGGGGTGGTGTGACCTGTGGATA s panTro4.chr3 199794863 49 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATCTCACCTGTGGATG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 86491 49 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=6372.000000 s hg38.chr3_KI270935v1_alt 156155 87 + 197351 CTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCAC s panTro4.chr3 199794912 87 + 202329955 CTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=24214.000000 s hg38.chr3_KI270935v1_alt 156242 56 + 197351 CTGTGGATGCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794999 56 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 48 s papAnu2.chr2 86483 56 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGT i papAnu2.chr2 T 57 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=9399.000000 s hg38.chr3_KI270935v1_alt 156298 48 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGAGTGACGTGACCTGTGGAT s panTro4.chr3 199795055 48 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2686.000000 s hg38.chr3_KI270935v1_alt 156346 40 + 197351 GCTGAGGAAGTGCTAGTGACAGGAAGAGGCATGGTGTCAC s panTro4.chr3 199795103 40 + 202329955 GCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=12109.000000 s hg38.chr3_KI270935v1_alt 156386 56 + 197351 CTGTGGATACTGAGGAAGTGTCGGTGACAAGAAGAGAGGTGGCATGACCTGTGGAT s panTro4.chr3 199795143 56 + 202329955 CTGTGGATACTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=7576.000000 s hg38.chr3_KI270935v1_alt 156442 40 + 197351 GCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCCTGAC s panTro4.chr3 199795199 40 + 202329955 GCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=12791.000000 s hg38.chr3_KI270935v1_alt 156482 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199795239 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=5293.000000 s hg38.chr3_KI270935v1_alt 156538 29 + 197351 GCTGAGGAAGGGACGGTTACAGGAAGAGA s panTro4.chr3 199795295 29 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGA i panTro4.chr3 C 0 T 1200 s macFas5.chr2 98648 29 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGT i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2957.000000 s hg38.chr3_KI270935v1_alt 156567 11 + 197351 GGTGGCGTGAC s panTro4.chr3 199794124 11 + 202329955 GGTGGCGTGAC i panTro4.chr3 T 1200 C 0 s macFas5.chr2 98677 11 + 192460366 GGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10635.000000 s hg38.chr3_KI270935v1_alt 156578 48 + 197351 CTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGTC s panTro4.chr3 199794135 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=12951.000000 s hg38.chr3_KI270935v1_alt 156626 56 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAAGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794183 56 + 202329955 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10188.000000 s hg38.chr3_KI270935v1_alt 156682 136 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCCTGACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794239 136 + 202329955 ACTGAGGAAGTATCAGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8781.000000 s hg38.chr3_KI270935v1_alt 156818 44 + 197351 CTGTGGATGCTGAGGAAGTGCTGGTGAGAGGAAGAGGGGTGGCC s panTro4.chr3 199794375 44 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTG i panTro4.chr3 C 0 I 288 s macFas5.chr2 98640 44 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCG i macFas5.chr2 T 56 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2726.000000 s hg38.chr3_KI270935v1_alt 156862 12 + 197351 TGACCTGTGGAT s panTro4.chr3 199794707 12 + 202329955 TCACCTGTGGAT i panTro4.chr3 I 288 C 0 s macFas5.chr2 98684 12 + 192460366 TGACCTGTGAAT i macFas5.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=11064.000000 s hg38.chr3_KI270935v1_alt 156874 136 + 197351 GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTAGATGCTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC s panTro4.chr3 199794719 136 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATGTCACCTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGATGTCACCGCTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=11214.000000 s hg38.chr3_KI270935v1_alt 157010 56 + 197351 CTGTGGATAATGAGGAAGCATCGGTGACATGAAGAAGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199794855 56 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGATCTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 56 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 56 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=6996.000000 s hg38.chr3_KI270935v1_alt 157066 88 + 197351 GCTGAGGAAGGGCTAGTGACAGGAAGAGGGGTGGTGTCATCTGTGGACACTGAGGAAGCGTCGGTGACAAGAAGAGAGGTGGTGTCAC s panTro4.chr3 199794911 88 + 202329955 GCTGAGGAAGGGCTGGTGACAGGAAGAGACGTGGTGTCACCTCTGGATACTGAGGAAGTGTTGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=24478.000000 s hg38.chr3_KI270935v1_alt 157154 57 + 197351 CTGTGGATGCTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTCACCTGTGGATA s panTro4.chr3 199794999 57 + 202329955 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 56 T 57 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=6102.000000 s hg38.chr3_KI270935v1_alt 157211 87 + 197351 ATGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATGCTGAGGAAGGGCTAGTGACAGGCAGAGGGGTGGCCTGAC s panTro4.chr3 199795056 87 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGGGTTGGCGTGACCTGTGGATGCTGAGGAAGGGTTGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=12793.000000 s hg38.chr3_KI270935v1_alt 157298 57 + 197351 CTGTGGATGCTGAGGAAGCATCGGTGACAAGAAGAGGGGTGGTGTCACCTGTGGATA s panTro4.chr3 199795143 57 + 202329955 CTGTGGATACTGAGGAAGTATCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGATG i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 57 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2839.000000 s hg38.chr3_KI270935v1_alt 157355 39 + 197351 CTGAGGAAAGGCTGGTGACAGGAAGAGGCGTGGTGTCAC s panTro4.chr3 199795200 39 + 202329955 CTGAGGAAGAGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98697 57 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=19040.000000 s hg38.chr3_KI270935v1_alt 157394 48 + 197351 CTGTGGATACTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGGCGTGAC s panTro4.chr3 199795239 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 57 T 48 s papAnu2.chr2 86483 48 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=4005.000000 s hg38.chr3_KI270935v1_alt 157442 9 + 197351 CTGTGGATA s panTro4.chr3 199795287 9 + 202329955 CTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 9 + 192460366 CTGTGGATG i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 9 - 187378091 CTGTGAGTA i papAnu2.chr2 C 0 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=7996.000000 s hg38.chr3_KI270935v1_alt 157451 39 + 197351 CTGAGGAAGCATCAGTGACATGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795296 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=11098.000000 s hg38.chr3_KI270935v1_alt 157490 48 + 197351 CTGTGGATGCTGAGGAGGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199795335 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=13523.000000 s hg38.chr3_KI270935v1_alt 157538 57 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATA s panTro4.chr3 199795383 57 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8666.000000 s hg38.chr3_KI270935v1_alt 157595 39 + 197351 CTGAGGAACTGTCGGTGACAGGAAGAGAGGTGGCGTGAC s panTro4.chr3 199795440 39 + 202329955 CTGAGGAAGTGTCGGTGACAGGAAGAGAGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10621.000000 s hg38.chr3_KI270935v1_alt 157634 48 + 197351 CTGTGGATGCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795479 48 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 48 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=4191.000000 s hg38.chr3_KI270935v1_alt 157682 8 + 197351 CTGTGGAT s panTro4.chr3 199795527 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98688 8 + 192460366 CTGTGAAT i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86483 8 - 187378091 CTGTGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=14596.000000 s hg38.chr3_KI270935v1_alt 157690 40 + 197351 GCTGAGGAAAGGCTGGTGACAGGAAGAGGGGTGACGTGAC s panTro4.chr3 199795535 40 + 202329955 ACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86491 40 - 187378091 GCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3825.000000 s hg38.chr3_KI270935v1_alt 157730 8 + 197351 CTGTGGAT s panTro4.chr3 199795575 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8203.000000 s hg38.chr3_KI270935v1_alt 157738 40 + 197351 TCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795583 40 + 202329955 ACTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 40 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=23946.000000 s hg38.chr3_KI270935v1_alt 157778 57 + 197351 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199795623 57 + 202329955 CTGTGGATATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10102.000000 s hg38.chr3_KI270935v1_alt 157835 47 + 197351 CTGAGGAAGCATCGGTGACATGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199795680 47 + 202329955 CTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2229.000000 s hg38.chr3_KI270935v1_alt 157882 13 + 197351 GCCGAGGAAGCGT s panTro4.chr3 199795727 13 + 202329955 ACTGAGGAAGTGT i panTro4.chr3 C 0 T 288 s macFas5.chr2 98648 13 + 192460366 GCTGAGAAAGCAC i macFas5.chr2 T 48 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8179.000000 s hg38.chr3_KI270935v1_alt 157895 35 + 197351 AGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199795452 35 + 202329955 CGGTGACAGGAAGAGAGGTGGCGTGACCTGTGGAT i panTro4.chr3 T 288 C 0 s macFas5.chr2 98661 35 + 192460366 CCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=-31.000000 s hg38.chr3_KI270935v1_alt 157930 1 + 197351 G s panTro4.chr3 199795487 1 + 202329955 A i panTro4.chr3 C 0 T 279 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=0.000000 s hg38.chr3_KI270935v1_alt 157931 40 + 197351 CTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGCTGTCCCC e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795488 279 + 202329955 T a score=4232.000000 s hg38.chr3_KI270935v1_alt 157971 18 + 197351 CTGTGGATGCTGAGGAAA s macFas5.chr2 98640 18 + 192460366 CTGTGGATGCTGAGAAAG i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 18 - 187378091 CTGTGGATGCTGAGGATG i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795488 279 + 202329955 T a score=10445.000000 s hg38.chr3_KI270935v1_alt 157989 30 + 197351 GGCTGGTGACAGGAAGAGGGGTGACGTGAC s panTro4.chr3 199795209 30 + 202329955 AGATGGTGACAGGAAGAGGGGTGGTGTGAC i panTro4.chr3 T 279 C 0 s macFas5.chr2 98658 30 + 192460366 CACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86501 30 - 187378091 CGCTGCTGACGGCAAGAGGGGTGGCATGAC i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3825.000000 s hg38.chr3_KI270935v1_alt 158019 8 + 197351 CTGTGGAT s panTro4.chr3 199795239 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=-1043.000000 s hg38.chr3_KI270935v1_alt 158027 1 + 197351 -T s panTro4.chr3 199795247 1 + 202329955 -A i panTro4.chr3 C 0 I 240 s macFas5.chr2 98648 1 + 192460366 G- i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8291.000000 s hg38.chr3_KI270935v1_alt 158028 39 + 197351 CTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795488 39 + 202329955 CTGAGGAAGCGTCGGTGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 I 240 C 0 s macFas5.chr2 98649 39 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=24057.000000 s hg38.chr3_KI270935v1_alt 158067 57 + 197351 CTGTGGATACTGAGGAAGGGCTGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGATA s panTro4.chr3 199795527 57 + 202329955 CTGTGGATACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTCACCTGTGGATA i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 57 + 192460366 CTGTGGATGCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAATA i macFas5.chr2 T 48 T 48 s papAnu2.chr2 86483 57 - 187378091 CTGTGGATGCTGAGGATGCGCTGCTGACGGCAAGAGGGGTGGCATGACCTGTGAGTA i papAnu2.chr2 T 56 T 57 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10073.000000 s hg38.chr3_KI270935v1_alt 158124 47 + 197351 CTGAGGAAGCATCGGTGACATGAAGAGGGGTGGTGTGACCTGTGGAT s panTro4.chr3 199795584 47 + 202329955 CTGAGGAAGTGTCGGTGACCGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 48 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=10286.000000 s hg38.chr3_KI270935v1_alt 158171 48 + 197351 GCCGAGGAAGCGTAGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT s panTro4.chr3 199795631 48 + 202329955 ATTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGACCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98648 48 + 192460366 GCTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGACCTGTGAAT i macFas5.chr2 T 48 T 56 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=2828.000000 s hg38.chr3_KI270935v1_alt 158219 40 + 197351 GCTGAGGAAGTGTCAGTGACAGGAAGAGGGGTGCTGTCCC s panTro4.chr3 199795679 40 + 202329955 ACTGAGGAAGCTTCGGTGACAGGAAGAGGGGTGGTGTCAC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 56 + 192460366 T e papAnu2.chr2 86540 57 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8340.000000 s hg38.chr3_KI270935v1_alt 158259 17 + 197351 CTGTGGATGCTGAGGAA s panTro4.chr3 199795719 17 + 202329955 CTGTGGATACTGAGGAA i panTro4.chr3 C 0 T 240 s macFas5.chr2 98640 17 + 192460366 CTGTGGATGCTGAGAAA i macFas5.chr2 T 56 C 0 s papAnu2.chr2 86483 17 - 187378091 CTGTGGATGCTGAGGAT i papAnu2.chr2 T 57 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=5985.000000 s hg38.chr3_KI270935v1_alt 158276 20 + 197351 AGGCTGGTGACAGGAAGAGG s panTro4.chr3 199795496 20 + 202329955 GCGTCGGTGACAGGAAGAGA i panTro4.chr3 T 240 C 0 s macFas5.chr2 98657 20 + 192460366 GCACCCGTGACAGGAAGAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 86500 20 - 187378091 GCGCTGCTGACGGCAAGAGG i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e canFam3.chr33 29085096 529 + 31377067 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3867.000000 s hg38.chr3_KI270935v1_alt 158296 11 + 197351 GGTGACGTGAC-- s panTro4.chr3 199795516 11 + 202329955 GGTGGTGTCAC-- i panTro4.chr3 C 0 C 0 s macFas5.chr2 98677 11 + 192460366 GGTAGCGTGAC-- i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86520 11 - 187378091 GGTGGCATGAC-- i papAnu2.chr2 C 0 C 0 s canFam3.chr33 29085625 13 + 31377067 GGTGACGTGTGTC i canFam3.chr33 I 529 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=5415.000000 s hg38.chr3_KI270935v1_alt 158307 8 + 197351 CTGTGGAT s panTro4.chr3 199795527 8 + 202329955 CTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98640 8 + 192460366 CTGTGGAT i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86531 8 - 187378091 CTGTGAGT i papAnu2.chr2 C 0 T 56 s canFam3.chr33 29085638 8 + 31377067 CCGTGGTT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=3318.000000 s hg38.chr3_KI270935v1_alt 158315 14 + 197351 TCTGAGGAAGTGTC s panTro4.chr3 199795535 14 + 202329955 ACTGAGGAAGCGTC i panTro4.chr3 C 0 I 193 s macFas5.chr2 98648 14 + 192460366 GCTGAGAAAGCACC i macFas5.chr2 C 0 C 0 s canFam3.chr33 29085646 14 + 31377067 CCTGCTGGGGTGTC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=4836.000000 s hg38.chr3_KI270935v1_alt 158329 26 + 197351 GGTGACAGGAAGAGGGGTGGTGTGAC s panTro4.chr3 199795742 26 + 202329955 AAAGACAGGAAGAGAGGTGGTGTCAC i panTro4.chr3 I 193 C 0 s macFas5.chr2 98662 26 + 192460366 CGTGACAGGAAGAGTGGTAGCGTGAC i macFas5.chr2 C 0 T 48 s canFam3.chr33 29085660 24 + 31377067 --TGATGCAATCAGTGTCGTCGGGAC i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86539 56 - 187378091 T e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=9607.000000 s hg38.chr3_KI270935v1_alt 158355 18 + 197351 CTGTG--GATACTGAGGAAG s panTro4.chr3 199795768 18 + 202329955 CTGTG--GATACTGAGGAAG i panTro4.chr3 C 0 T 193 s macFas5.chr2 98640 18 + 192460366 CTGTG--GATGCTGAGAAAG i macFas5.chr2 T 48 C 0 s papAnu2.chr2 86483 18 - 187378091 CTGTG--GATGCTGAGGATG i papAnu2.chr2 T 56 C 0 s canFam3.chr33 29085684 20 + 31377067 CTGTGATGTCATTGGTGATG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=11851.000000 s hg38.chr3_KI270935v1_alt 158373 39 + 197351 GGCTGGTG--ACAGGAAGAGGGGTGGCGTGACCTGTGGATA-- s panTro4.chr3 199795593 39 + 202329955 TGTCGGTG--ACCGGAAGAGGGGTGGCGTGACCTGTGGATA-- i panTro4.chr3 T 193 C 0 s macFas5.chr2 98658 39 + 192460366 CACCCGTG--ACAGGAAGAGTGGTAGCGTGACCTGTGAATA-- i macFas5.chr2 C 0 T 48 s papAnu2.chr2 86501 39 - 187378091 CGCTGCTG--ACGGCAAGAGGGGTGGCATGACCTGTGAGTA-- i papAnu2.chr2 C 0 I 616 s canFam3.chr33 29085704 42 + 31377067 TGTTGCTTCCACTGGAAGA-TCTTGAAGTGTCCCCAGGGGAGG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=8235.000000 s hg38.chr3_KI270935v1_alt 158412 47 + 197351 CTGAGGAAGCATCGGTGACATGAAGAGGGGTGGTGTGA-----CCTGTGGAT s panTro4.chr3 199795632 47 + 202329955 TTGAAGAAGCGTCGGTGACAGGAAGAGGGGTGGCGTGA-----CCTGTGGAT i panTro4.chr3 C 0 C 0 s macFas5.chr2 98649 47 + 192460366 CTGAGAAAGCACCCGTGACAGGAAGAGTGGTAGCGTGA-----CCTGTGAAT i macFas5.chr2 T 48 I 5347 s canFam3.chr33 29085746 26 + 31377067 CTGA--------------------------TGGTGTGGGTATTTCTGTCACT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e papAnu2.chr2 86540 616 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=4109.000000 s hg38.chr3_KI270935v1_alt 158459 34 + 197351 GCCGAGGAAGCGTAGGTGACA-GGAAGAGGGGTGG s panTro4.chr3 199795679 34 + 202329955 ACTGAGGAAGCTTCGGTGACA-GGAAGAGGGGTGG i panTro4.chr3 C 0 M 3000 s canFam3.chr33 29085772 35 + 31377067 GCGGAAGGTGTGTGGCTGACACTGGAAAGGGATGA i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e papAnu2.chr2 86540 616 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=-114.000000 s hg38.chr3_KI270935v1_alt 158493 1 + 197351 C s canFam3.chr33 29085807 1 + 31377067 A i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 55525 620 + 111706 I e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e chlSab2.chr15 434286 620 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e papAnu2.chr2 86540 616 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=109748.000000 s hg38.chr3_KI270935v1_alt 158494 201 + 197351 GTTGCTGATGAGGGCCGTCGTGAAGGTTTTACCAGACCCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTGGAGATGTAAGCCCACTGGATGTGATCGATGGAGGTGTGGGTGGGACTGTTGAGAAGGTGTCGGTTGCCTGGGACGCCAGGCTGATAGTGTCAGACCCTCTGCTGGTTCTTGTCCTCTGAGTCTGGGCCAT s rheMac3.chrUn_JH291127 56145 201 + 111706 GTTGCTGACAAGGGCCATGTTGAAGGTTGTACCAGACCCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTGGAAATGTGAGCCCACTGGATGTGATCGAAGGAGGTGTGGGTGTGACTGTTGAGAAAGTGTCAGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCCTGTCTTCTCAGTCTGCGCCAT i rheMac3.chrUn_JH291127 I 620 C 0 s papAnu2.chr2 87156 201 - 187378091 GTTGCTGACGAGGGCCATGTTGAAGGTTGTACCAGACCCTGAAGGTGACAGAGTGTGGGTCTCGGTTTGTGGAAATGTGAGCCCACTGGATGTGATCGAAGGAGGTGTGGGTGTGACTGTTGAGAAAGTGTCAGTCGCCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCCTGTCCTCTGAGTCTGCGCCAT i papAnu2.chr2 I 616 C 0 s chlSab2.chr15 434906 201 - 91754291 GTTGCTGATGAGGGCCATGTTGAAGGTTGTACCAGACCCTGAAGGTGACAGAGCGTGGGTCTCGGTTTGTGGAAATGTGAGCCCACTGGATGTGATCGAAGGAGGTGTGGGTGTGACTGTTGAGAAAGTGTCGGTCACCTGGGACACCAGGCTGATGGTGTCAGACCCTCTGCTGGTTCCTGTCCTCTGAGTCTGCGCCAT i chlSab2.chr15 I 620 C 0 s canFam3.chr33 29085808 146 + 31377067 GTACTTGG-------------------TGTGTCAGAC----AAGGC--CATGTCCTGGGTCGAGTCATCTGTAGGTGTGTGTTCACTTCGGGAGGATGAGGGA---GTGGATGTGATCATCG----------------CTGAGACA-----CTGCTGGTTGCAGACTCTGTGCTGGTCTCCAT------GGTCTGGGTCAT i canFam3.chr33 C 0 I 919 e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=61994.000000 s hg38.chr3_KI270935v1_alt 158695 121 + 197351 CCGGGAAATGGCG--GCTGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTCGGTCTCCCTGCAGTGGAGGCCTCAG----------------------------AGAGGGTGGGATG-----------------AAAGGTGCCGGGGACGATC--------------- s rheMac3.chrUn_JH291127 56346 121 + 111706 CCGGGAAATGGCG--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTTGGTCTCCCTGCAGTGGAGGCCTCAG----------------------------AGAGGGTGACAGG-----------------AAAGGTGCTGGGGACAATC--------------- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 87357 121 - 187378091 CCGGGAAATGGCG--GCCATCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGACTGTCCTGTCGGTCTCCGTGCAGTGGAGGCCTCAG----------------------------AGAGAGTGACAGG-----------------AAAGGTGCTGGGGACAATC--------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 435107 121 - 91754291 CTGGGAAATGGCA--GCCGTCTCCTGAGGAGAGGCACTGGGAGAAGTTGGGCTTGAGTGTCCTGTCGGTCTCCCTGCAGTGGAGGCCTCAG----------------------------AGAGGGTGACAGG-----------------AAAGGTGCTGGGGACAATC--------------- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29086873 183 + 31377067 CCCTGAGATGACGCTGTTGTCTCTGGAGTAGAAGTCAGGGAAGAGTGTGCTGTTGAGTGTCCCCCTGGTCCACTTGTCATTGAGTCTGTTGAGCTGACTGGTGTAACACTTCCCGTTTCAGGTGGTGACGTGTGTCCCGTGGTTCCTGCTGGGGTGTCTGATGCAATCAGTGTCGTCGGGACC i canFam3.chr33 I 919 C 0 e mm10.chr16 65449197 1915 - 98207768 I e calJac3.chr17 957070 1047 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=511521.000000 s hg38.chr3_KI270935v1_alt 158816 661 + 197351 GAAGACGCCATTCCTG------TGCTTAC------------TGGGATGG---------------CACCATGACTGGCTGAGGCGGACAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTTTGATGAAAACCTTGTCGTCTCTCCTGAGGTGGATATTCCTTCGCTT------CCTGAAGGTGT-TGTGCCACTCGCCCCGGATGAGGAAGGGGTAGCTGTGCCCGCTGAGGTGGTTCGTGACCCTGAGGAG--GCCGGTTCGCTGGTCTGTGTTTGTCCAGAGGCCTCTGTGCTCTCAGCCTGGTGGGTATGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATTGTCCTTCTGGGCCCCCTGGTGTTGACACTACAGAGTTGGCCAGAGTAAGGGCACCTGTTTTGGAAAGTGA------------CGTGCCTCCTGAGGGCCCCAGGGTGGCATCATGGCTGCTGGGTGCTGCCTGCAGTGCTGTGGTCGGGGC----------CTGGGTTGTG-TGA-CCATCCCCGGTGGGAGCTGGGGCAAAGGTTGTTGCTGCACTTATGGTGGGTGCGTCCTGAGGAACAATTTCTGAGGGCGAGTGCCCACTGGCTGTGAAGGAAGAACCTG------------GGGTGGTGAC-----------TGTCTTGG---TGTCAGTC--ATGGGGGAGACG----------------GACCTCG-TGGTTTGTGATTCTTGTG- s rheMac3.chrUn_JH291127 56467 652 + 111706 GCAGACACCATTCCTG------TGCTTAC------------TGGGGTGG---------------CATCATGACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTTACTGTCCCTGGAGGGGTTTGGCGAGAACCATGTGGTCTCTCCTGTGATGGATATTCCTTCGCTT------CCTGAAGGTGT-TGTGCTGCTCGCCCTGGATGAGGAAGGGGTAGCTGTGCCCTCTGAGGTGGTGCCCGACCCTGAGGAG--GCCGGTTCACTGGTCTGTGTTTCTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTTTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGGGACCCCTGGTGTTGACACTACA-------CCAGG--AAGGGCACCTGTTATGGAAAGTGA------------TGCGCCTCCTGAGGGCGCCAGGGTGGAGTCAGGGCTGCTAGGTGCCGCCTGCAGTACTGTGGTTGGGGC----------CTGGGTTGTG-TGA-CCATCCCCAGTGGGAGCTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGGTGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGAC-----------TGTCTTGG---TGTCAGTC--ACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 87478 652 - 187378091 GCAGACACCATTCCTG------TGCTTAC------------TGGGGTGG---------------CATCATGACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTTTGGCGAGAACCATGTGGTCTCTCCTGTGATAGATATTCCTTCGCTT------CCTGAAGGTGT-TGTGCTGCTCGCCCTGGATGAGGAAGGGGTAGCTGTGCCATCTGAGGTGGTGCCCGACCCTGAGGAG--GCCGGTTCACTGGTCTGTGTTTCTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGGGACCCCTGGTGTTGACACTACA-------CCAGG--AAGGGCACCTGTTATGGAAAGTGA------------TGCGCCTCCTGAGGGCGCCAGGGTGGAGTCAGGGCTGCTGGGTGTGGCCTGCAGTACTGTGGTTGGGGC----------CTGGGTTGTG-TGA-CCATCCCCAGTGGGAGCTGGGGCCAAGGTTGTCGCTGCACTTATGGTAGGTGTGTCCTGAGGAGCAATTTCTGAGGGTGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGAC-----------TGTCTTGG---TGTCAGTC--ACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 435228 652 - 91754291 GCAGACACCATTCCTG------TGCTTAC------------TGGGGTGG---------------CATCATGACTGGCTGAGGCAGATAGCAATTCGGTTGTTGACTGGGTTGTGTGACTGTCCCTGGAGGGGTTTGGTGAGAACCATGTGGTCACTCCTGTGATGGATATTCCTTCGCTT------CCTGAAGGTGT-TGTGCCGCTCGCCCTGGATGAGGAAAGGGTAGCTGTGCCCTCTGAGGTGGTGCCCGACCCCGAGGAG--GCCGGTTCACTGGTCTGTGTTTCTCCAGAGGCCTCTGTGCCTTCAGCCTGGTGGGTTTGGGTCATGGCTGCTGCTGTGTCAGG---TGAGGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTAGGACCCCTGGTGTTGACACTACA-------CCAGG--AAGAGCGCCTGTTATGGAAAGTGA------------TGCACCTCCTGAGGGCGCCAGGGTGGAGTCAGGACTGCTAGGTGCCGCCTGCAGTACTGTGGTTGGGGC----------CTGGGTTGTG-TGA-CCATCCCCAGTGGGAGCTGGGGCAAAGGTTGTCGCTGCACTTATGGTAGGTGCGTCCTGAGGAGCAATTTCTGAGGATGAGTGCCCACTGGCTGTGAAGGAAGAGCCTG------------GGGTGGTGAC-----------TGTCTTGG---TGTCAGTC--ACAGGGGAGATG----------------GACCTTG-TGGTTTGGGATTCTTGTG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 958117 679 - 74750902 GGGGACCCCGTTCCCA------TGCTTGC------------CAGGATGGTGCTTGCCCGAGTGACGTCCGGACTGGCTGAGGGGGACGGCAATTCGCTTGTTGACTGGGGGATGTGAGTGTCCCTGGAGGGTCTTGGTGAGAACCGCGTGGTCTCCCCTGAGGTGGACATTCCGTGGCTT------CCTGAAGGTGT-TGTGCCACTTGTCCTGGATGAGGAAGGGGTAGCTGTGCCAGCTGGGATGGGGCCTGACCCTGAGGAG--GCCGGTTGGCTGGTCTGTGTTTCTCCGGAGGCCTCTGTGCCCCGAGCCTGGTGGGGTTGGGTCATAGCGGGTGCTGTGCTGGG---TGACGTGCTGGCAGAGGCTGATGTCCATCGTCCTTCTGCATCCACTGGTGTTGACACCGCAGAGGTGGCCGGAGGAATGGTGCCTGTGATGGAAAGCGA------------TGTGCCTCCTGAGGGCCCCAGGGTGGCGTCAGGGCTGCCGGGTGCTGCCTGCGGTGCTGTGGCTGGGGC----------CTGGGGCCTG-TGA-CCGTCCCTGGAGGGGGCTGGGGTGAAGGTTGTTGCTGCACTGACGGCGGATGCGTCCTGAGGAACAGTTTCTGAGGGCGAGTGTCCGCTGGCTGTGAAGGAAGAAGCTG------------GGGTGGTGGC-----------TGTCTTGAGGCTGTCAGTC--ACGGGGGAGACG----------------GACCTCG-TGGTTTGGGATTCTCGTG- i calJac3.chr17 I 1047 C 0 s canFam3.chr33 29087056 709 + 31377067 TGTGATGTCATTGGTGATGTGTTGCTTCCACTGGAAGATCTTGAAGTGT---------------CCCCAGGGGAGGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGTGGCTGACACTGGAAAGGGATGAAGTGCTTGGTGTG------TCAGACAAGGCCATGTCCTGGGTTGAGTCATCTGTAGGTGTGTGTTCACTTCG----GGAGGATGAGGGAGTGGATGTGATCATCG---------------CTGAGACACTGCTGGTTGCAGACTCTGTGCT--------GGTCTCCATGGTCTGGGTCGTGTAACCCTGAG--ATGACT-CTGTTGTCTCTGGAGTAGAAGTCAGGGAAGAGTGTGCTGGTGAGTGTCCCCCTGGTCCACCTGTCATTGAGCCTGTTGAGCTGACTGGAGTAACACTTCCCGTTTCAGGTGGTGACGTGTGCCTTGTTGTGCCTGCTGGGGTGTCT--GTTGCCATCAGTGTCGTCAGG----ACCTGTGATACTGTTGGTGATGTGCTGCTTTCACTGGAAGATGATGAGGTGTCCCCAGGGGAAGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGT------GGCTGACACTGGAAGGGGACGAACTGCTTGGTGTGTCAGACAAGGCTGTGTCCATGTCCTGGGTCGTGCCATCTGTAGGAGTGTCTCCT---CTTCGGGAGGATGAGGGAGAGGATGTGATCATCGCTGAGACACTGCTGGCTCCAGACTCT-GTGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65449197 1915 - 98207768 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=118999.000000 s hg38.chr3_KI270935v1_alt 159477 132 + 197351 TGGTCTGCGGGGCTTGAGTGTGACCCCTTTGGGAAACAGCTGGTGATTCCTGAGGAGAGGTGCTTGTGGAATGTATTGTTGAATGATTT---GTTGATGGTGCCGTTGTAATTT--GTTGTGATGTGTGTCTATCCA s rheMac3.chrUn_JH291127 57119 132 + 111706 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGAAACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTT---GTTGATGGTGCCATTGTAATTT--GTTGTGATGTGTGTCCATCCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 88130 132 - 187378091 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGAAACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTT---GTTGATGGTGCCATTGTAATTT--GTTGTGATGTGTGTCCATCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 435880 132 - 91754291 TGGTCTGCGGGGCTTGAGTGTGACCTCTCTGGGAAACAGCCAGTGATTCCTGAGGAGAGGTGTTTGTGGAATGTATTGTTGAATGATTT---GTTGATGGTGCCATTGTAATTT--GTTGTGATGTGTGTCCATTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 958796 132 - 74750902 TGGTCTTCGAGGCTGGAGTGTGACCTCTGTGGGAAACAGCCGACGGTCTCCGAGGAGAGGTGCTCACAGGGTGTGTTGTTGGAGGATAT---GTTGACGGTGCCGTTGTACTTT--GTGGTGGTGTGTGTCCATCCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65451112 137 - 98207768 TGGTCTCCATGTTTCCAGTGTGTTGTCTCTGAGGAAGTGATGTTAATTCCTGTGAAGAAGTGCTGGGCATTGACACTGTTGACATATTCTGGGATGAAGGTGTCAATGAGACCTGGGTGGTGGCAAGTGTAGAACCA i mm10.chr16 I 1915 I 619 s canFam3.chr33 29087765 118 + 31377067 TGATCTCCATGGCCTGGGTGGAGTGACCCTGAGATGACTCTGTTGTCTCCAGAGTAGAAGTCAGGGAAGAGTGTGCTGTTGAGTGTCCC---CCTGGT----------CCACTT--GTCATTAGGCCTGTTGA---- i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=310257.000000 s hg38.chr3_KI270935v1_alt 159609 420 + 197351 GCATAGGTGAAGAAGATGGGGATGTGGCCGTTTTTATCATCTG-AGTCACACTGTAGCTTGGGCTGCTGAGAAGAGCCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCGCCTGCCCCTGTTGTTTTTGGGAGAGTTGTGCTGTG----GGAGGAGTAT----GTGGTGGGCTCTCCTGGTTCCCCTATTGCTGAGACCTTAGAGGGGACCCTTGGAATAGTGCCAGCTGCCCCTG---TAGATGGATTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGATGTTGAGGGCAGTTCTGTTTGTGACCAAGTTGTGTGGCCTTTGCTGGAGAATGAGGAAGGCCATGTTGTTGTTTCATGTAGAGTAAATATTTCTTGAGACACACCTGG----AGAGAATGAGCTCCTCTCATGAGGCCGTCCTG s rheMac3.chrUn_JH291127 57251 423 + 111706 GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCCTGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTGT----GTGGTGGGCTGTCCTGATTCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTATGGTTTCATGTGGAGGAAATGTCTCATGAGACACACCTGG----AGACACTGAACTCCTCTCATAAGGCCGTCCTA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 88262 423 - 187378091 GCATAGGTGAAGAAGATGGGGATGTGGCCGTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCGTTGTGTCTGGGCACCTGCCCCTGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTGT----GTGGTGGGCTGTCCTGATTCACCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCGGCTGTCCCCGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTATGGTTTCATGTGGAGGAAATGTCTCATGAGACACACCTGG----AGAGACTGAACTCCTCTCATGAGGCCATCCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 436012 417 - 91754291 GCATAGGTGAAGAAGATGGGGTT------GTATTTATCATCTG-AGTCACACTGTAGCTTGGGCTGTTGATAGGAACCTCTCCAGTGGTCCCCGTTTCTTGTGTCCATTGTGTCTGGGCACCTGCCCCTGTTGTTTCCAGGAGAGTTGTGCTGTG----GGAGGGGTGT----GTGGTGGGCTGTCTTGAATCCCCTATTGTTGAGACCTCAGAGGGGACCCTTGGAATAGTGCCAGCTGTCCCTGGCACTATTGGACTTCCTGTGACAAGCCTAGTG-GCAGCACCTGTTGGTGTTGAGGGCAGTTCTTTTGGTGAGCGAGTTGTGCGGTCTTCACTGGAGAATGAGGAAGGCCATGTTATGGTTTCATGTGGAGGAAATGTCTCATGAGACACACCTGG----AGAGACTGAACTCCTCTCATGAGGCCGTCCTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 958928 408 - 74750902 GCATCGGTGAGGAAGGGGGCGATGTGGCTGCTTTTGTCATCTG-GGTCACACTGTATCTTGGGCTGTGGACAAGAACCTCTCCAGTGGTCCCCATTTCTTGTGTCCATTGTGTCTGGGCACTTGCCCCTGTTGTTTCTGGGAGAGCTGTGCTATG----GGAGGGGCGT----GTGGTGGGCTGCCCTGGTTCCCCTATTGTTGAGACCTCAGAAGGGACTCCTGGAATAGTGCCAGTTGTCCACG---TAGATGGACTTCCTGTGACCAGCATAGTG-GCAACACTTGTTGGTGTTGAGGGCAGCTCTTTTGGTAACCAAGTTGTGAGGCCTTCGCT---------GGAAGTCAGTGTT---GTTTCATGTGGAGTAAACGTCTCATGAGACACACCTGG----AGAGACTGAGCTCCTTTCATGAGGCCGTCCTG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29087883 350 + 31377067 GCTGATGTGGGTAACA-------------CTTCCCATTACCGGTAGTGACG-TGTGCCTTGTGGT------------TCCTGCTGAGGTGTCTGTTGCAATTGGTGGTGTTGTCGGGACCTCTGATGTCGTTGCTGATGTGTTGCTTACACTGGGAACCAAAGAGGTGTCACCAGGGGAGGCTG--ATGGTGTGGGTATTTCTGTCACTGCGGAAGGT------------GTG-TGGCTGACACTG---GAAAGGGA-------TGAAGTACCTGGTGTGTCAGACAAGGCCATGTCCTGGGTCGAGTCATCTGT-----AGGTGTGTGTTCACTTCGGGAGGATGAGGGAGAGGATGTGATCATCGC-------------------TGAGACACTGCTGGTTGCAGACTCTGTGCTGGTCTCCA------------ i canFam3.chr33 C 0 C 0 e mm10.chr16 65451249 619 - 98207768 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=256482.000000 s hg38.chr3_KI270935v1_alt 160029 279 + 197351 TGGTCTCTGCACCTTCACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAGAGAACTGGGGGAGAGTGCTGTTGACAGAGTGTCTGACCA------CCATATGGTTGAAACTTTGGAAGTGATTGCAGAAATGGTTCCAC---TTACAGATAGTGATGTCTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGATTGGCATTCTGAACACCTTTGATGTTACCAGGAATGTATTGCTGACACTGGAAGG------------------------GGATGAGATGGTTGTTT---------------------------CACCAGAAGGGAATG s rheMac3.chrUn_JH291127 57674 279 + 111706 TGGTCTCTGCACCTTCACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGAACTGGGGGAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAATGGTTCCCC---TTACAGGTAGTGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGCGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 88685 279 - 187378091 TGGCCTCTGCACCTTCACTCTGCTGGGTGTGGAAAGCTGTGGATATTTTTGGAGGTAAAGAACTGGGGGAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAATGGTTCCCC---TTACAGGTAGTGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGCGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 436429 279 - 91754291 TGGTCTCTGCACCTTCGCTCTGCTGGGTGTGGAAAGTTGTGGATATTTTTGGAGGTAAAGAACTGGGGGAGAGTGCTGTTGACAGTGTGTCTGACAA------CCATATGGTTGAAACTCTAGAAGTAATTGCAGAAATGGTTCCCC---TTATAGGTAGTGATATTTCCTCTGTGTTTCCAAGAGTAGAGTCTCTGGAGGTGGGCATTCTGAACACCTCTGATGTCACCAGGAATGTGTTGCTGACACTGGAAGG------------------------GGATGAAGTGGTTGTTT---------------------------CACCAGAAGGGAATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 959336 279 - 74750902 TGGTCTCTGCACCCTCACTCGGGTGGGTGTGGAAAGCTGGGGGTAGTTTTGGAGGTAAAGAACTCGGGGAGAGTGCTGTTGACAGGGTGTCTGACCA------CCATCTGGTTGAAACTTGAGAAGTGATGGCAGAAGTCGTTCCCC---TTACAGATCGCGCTGTCTCCTCTGTGTTTCCAAGAGTAGAAGCTGCGGAGGTTGGCATTCGGGACACCTCTGATGTTACCAGGAATGCGCTGCTGACACTGGAAGG------------------------GGACGAAGTGGTTGTTT---------------------------CAGCATAAGGGAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65451868 279 - 98207768 TGGTCCCCATGTTTTCAGTGTGTTGGCTCTGAGGAAGGGGTGACAATTTGTGAGTAGAAGTGATGGGTGTTGACACTGTTGACATATTCTGGGACGAAGGTGTCAATGTGGT-----CTGT----GTGGTGGCAGGTGTAGAACCTTGAGTCACTATTGCTGTTGTGTGTCTTGTGTCTCCTGAGGTAATTTCAGTGGAGGATGCTGTGGATAACATGTGTGTTGAACTTGGAGCTGAACTGCTCAAGCTGGAAGC------------------------ATGTGAGGTGGTTGTCT---------------------------CACCAGGAGAGATTG i mm10.chr16 I 619 C 0 s canFam3.chr33 29088233 321 + 31377067 TGGTCTGGG---------TGGAGTGACCCTGAGATGACGCTGTTGTCTCTGGAGTAGAAGTCAGGGAAGAGTGTGCTGTTGAGTGTCCCCCTGGTCC------ACTTGTCATTGAGTCTGTTGAGCTGACTGGTGTAACACTTCCTG---TTTCAGGTGGTGACGTGTGTCCCGTGGTTCCTGCTGGGGTGTCTGATGCAATCAGTGTCGTCGGGACCTGTGATGTCATTGGTGATGTGTTGCTTCCACTGGAAGATCTTGAAGTGTCCCCAGGGGAGGCTGATGGTGTGGGTATTTCTGTCACTGCGGAAGGTGTGTGGCTGACACTGGAAAGGGATG i canFam3.chr33 C 0 I 30 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=21315.000000 s hg38.chr3_KI270935v1_alt 160308 20 + 197351 TCTCCTGAGAAACTGTTCCA s rheMac3.chrUn_JH291127 57953 20 + 111706 TCTCCTGAGAAACTGTTCCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 88964 20 - 187378091 TCTCCTGAGAAACTGTTCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 436708 20 - 91754291 TCTCCTGAGAAACTGTTCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 959615 20 - 74750902 TCTCCTGAGAAACTGTTCCA i calJac3.chr17 C 0 C 0 s mm10.chr16 65452147 20 - 98207768 TTCTTTGGGAACTTGTCTCT i mm10.chr16 C 0 C 0 e canFam3.chr33 29088554 30 + 31377067 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=49121.000000 s hg38.chr3_KI270935v1_alt 160328 64 + 197351 CTTGGGTTGAATC-----------------CACTTGGTGAGGATAAAACAGTTGATGTTGTAACCGGTGTGAGGGTGTTGA--------- s rheMac3.chrUn_JH291127 57973 55 + 111706 CTTGGGTTGAATC-----------------CACTTGGTGAGGATAAAACAGTTGATGTTGTAACCGGTG---------TGA--------- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 88984 55 - 187378091 CTTGGGTTGAATC-----------------CACTTGGTGAGGATAAAACAGTTGATGTTGTAACCGGTG---------Tga--------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 436728 55 - 91754291 CTTGGGTTGAATC-----------------CACTTGGTGAGGATAAAACAGTTGATGTTGTAACCGGTG---------TGA--------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 959635 52 - 74750902 CTCAGAGTGAGTC-----------------CACTTGGTGAGGATAAAACAGTTGA---TGCAACCAGTG---------TGA--------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65452167 55 - 98207768 GTCTGAACTTGGT-----------------CACGTGAGGAAGCTGAAAGAGTTGATGTGGTCACCTCTG---------GGA--------- i mm10.chr16 C 0 I 2127 s canFam3.chr33 29088584 81 + 31377067 CCTGGGTCGAGTCATCTGTAGGTGTGTGTTCACTTCGGGAGGATGAGGGAGTGGATGTGATCATCGCTG---------AGACACTGCTGG i canFam3.chr33 I 30 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=12960.000000 s hg38.chr3_KI270935v1_alt 160392 9 + 197351 GGGTGTTGA s rheMac3.chrUn_JH291127 58028 9 + 111706 GGGTGTTGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 89039 9 - 187378091 gggtgttga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 436783 9 - 91754291 GGGTGTTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 959687 9 - 74750902 GGGTGTTGA i calJac3.chr17 C 0 C 0 s mm10.chr16 65454349 9 - 98207768 GGGTGTTGA i mm10.chr16 I 2127 I 2281 e canFam3.chr33 29088665 0 + 31377067 C e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=45880.000000 s hg38.chr3_KI270935v1_alt 160401 34 + 197351 TTTGAGATACTCTGGTGGTCTCCACGCTCTGAGT s rheMac3.chrUn_JH291127 58037 34 + 111706 TTTGAGATACTCTGGTGGTCTCTATGCTCTGAGT i rheMac3.chrUn_JH291127 C 0 I 378 s papAnu2.chr2 89048 34 - 187378091 tttgagatacTCTGGTGGTCTCTATGCTCTGAGT i papAnu2.chr2 C 0 I 378 s chlSab2.chr15 436792 34 - 91754291 TTTGAGATACTCTGGTGGTCTCTATGCTCTGAGT i chlSab2.chr15 C 0 I 4894 s calJac3.chr17 959696 34 - 74750902 TCTGAGGTCCTCTGGTGGTCCCCACGCTCTGAGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65456639 34 - 98207768 TTTGAGGTTGTCTGCTGGTGTCCATGCTTTCAGT i mm10.chr16 I 2281 C 0 s canFam3.chr33 29088665 34 + 31377067 TTGCAGACTCTGTGCTGGTCTCTATGGTCTGGGT i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=136291.000000 s hg38.chr3_KI270935v1_alt 160435 131 + 197351 CTGGTGGTTCTTAGAAAAAGCTGTTGTGTCCTGAGTAGAAGTCCTTGAGAAA-GTTG---CTGGTGATTGTCCTTCTGGATCAACTGTTACTAAGGCTGCTGAGGTGACTGGCATAAGACTTCCAGTAACAGGTA s rheMac3.chrUn_JH291127 58449 131 + 111706 CTGGTGGTTCTGAGAAAAACCTGTAGTGTCCTGAGTAGAAGTCCTTGAGGAA-GTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGGCATAAGACTTCTTGTAACAGGTA i rheMac3.chrUn_JH291127 I 378 C 0 s papAnu2.chr2 89460 131 - 187378091 CTGGTGGTTCTGAGAAAAATCTGTTGTGTCCTGAGTAGAAGTCCTTGAGGAA-GTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGAGGCTGCTGAAGTGACTGGCATAAGACTTCTTGTAACAGGTA i papAnu2.chr2 I 378 C 0 s chlSab2.chr15 441720 131 - 91754291 CTGGTGGTTCTGAGAAAAACCTGTTGTGTCCTGAGTAGAAGTCCTTGAGGAA-GTTG---CTGGTAATTGTCCTTCTGGCTCAGCTGTTATTGGGGCTGCTGAAGTGACTGGCATGAGACTTCTTGTAACAGGTA i chlSab2.chr15 I 4894 C 0 s calJac3.chr17 959730 128 - 74750902 CTGCTGGTTCTGAGGAAAAGCTGTTGTGTACTG---AGAAGTCCTTGAGAAA-GTTG---CAGAGGATTCTCCTTCTGGTTCGACTGTTATTGAGGCTACTGAGGTGACTGGCATAAGACTTCCTGTAACAGGTA i calJac3.chr17 C 0 I 1845 s mm10.chr16 65456673 125 - 98207768 GTGTTGGTTCTGAGGAAGGGTTGACATTTTTTGACTTGAA----TTGATGAGTGTTGACACTGGTGACAGTTTTTGTGGTGTAGATGTTGTTGAGACTTTCGTGGTATGTGTTGTAGAGTTCTGAGTAA------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29088699 131 + 31377067 CATGTGACCCTGAGATGACGATGTTGTCTCTGGAGTAGAAGTCAGGGAAGAG-TGTG---CTGGTGAGTGTCCCCCTGGTCCACCTGTCATTGAGTCTGTTGAGCTGACTGGTGTAACACTTCCCGTTTCAGGTG i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=451241.000000 s hg38.chr3_KI270935v1_alt 160566 496 + 197351 CT-GATGATGTCTCCCC-----TGGGTTTCCAAGAGTGGAGCCTGT------------------------------------------------------------------------------GGAGGTTGTCACTGTTATCTTCTCTGATGTCATCATGGATGTGTTTGTGACACTACAGAGGGATGAGGTAGCTGTTTCACCTGAAGGAGATGTCTTCtgagaaacagtccctgtcaca-ttgtgtacacttggagaGAAAGAAGGAGTTGAAGTGGTTCTGTGTGTTAGGGTGCTGGTTTGAGATTCCCTGGTGGTCTGCGTGCTCCGAGTCCAGTGGTTCTGAGAAGAAGCTGATGTGTCTTGGATAGAGGTCCTCCAGGAAGTTGTTCGTGATTGTCCTTCCTGTCCAGCTGTTATTGAGACTGCTGAGGTCACTGGGGTAGAACTTTCAGTTCCTGCTGTTGATGTCTCTTCTGTGTTTCCAAGAGTG---------------GAGTCTGTGGAG---------GTTGTCATTGTTATAGTCTTT--------------GATGTCATCATG-------------------------------------AGTGTGTTGGTGACACTGGAGGGAAATGATGTGGTCATTTC s rheMac3.chrUn_JH291127 58580 493 + 111706 C----TGATGTCTCCCC-----TGTGTTTCCAAGAGTGGAGTCTGT------------------------------------------------------------------------------GGAGGTTGTCGTTGTTATCTTCTTTGATGTCATCATGGGTGTGTTTGTGACACTAAAGAGGGATGAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGACGGAAGGAATTGATGTGGTTCTCTGTGTAAGAGTGCTGGTTTGAGATTCTTTGGTGGTCTCAGTGCTCTGAGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTTCTTGAGGACGTTGTTCGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGGTCACTGGGGTAGAACTTTCAGTTCCTGGTGTTGATGTCTCTTCTATGTTTCCAAGAGTG---------------GAGTCTGTGGAG---------GTTGTCATTGCTATAGTCTTT--------------GATGTCATCATG-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGGTCATTTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 89591 493 - 187378091 C----TGATGTCTCCCC-----TGTGTTTCCAAGAGTGGAGTCTGT------------------------------------------------------------------------------GGAGGTTGTCGTTGTTATCTTCTTTGATGTCATCATGGGTGTGTTTGTGACACTAAAGAGGGATGAGGTAGTTGTTTCACCTGgaggaaatgtcttctgagaaATAGTCCCTTTCACA-TTGTGTACActtggggagaaggaaggaattgATGTGGTTCTCTGTGTAAGAGTGCTGGTTTGAGATTCTTTGGTGGTCTCAGTGCTCTGAGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTTCTTGAGGACGTTGTTCGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGATCACTGGGGTAGAACTTTCAGTTCCTGGTGTTGATGTCTCTTCTGTGTTTCCAACAGTG---------------GAGCCTGTTGAG---------GTTGTCATTGTTATAGTCTTT--------------GATGTCATCATG-------------------------------------AGTGTGTTGGTGACACTGGAGGGAAATGGGGTGGTCATTTC i papAnu2.chr2 C 0 I 1837 s chlSab2.chr15 441851 493 - 91754291 C----TGATGTCTCCCC-----TGTGTTTCCAAGAGTGGAGTCTGT------------------------------------------------------------------------------GGAGGTTGTCGTTGTTATCTTCTTTGATATCATCATGGGTGTGTTTGTGACACTAAAGAGGGATGAGGTAGTTGTTTCACCTGGAGGAAATGTCTTCTGAGAAATAGTCCCTTTCACA-TTGTGTACACTTGGGGAGAAGGAAGGAATTGATGTGGTTCTCTGTGTAAGAGTGCTGGTTTGAGACTCTCTGGTGGTGTCTGTGCTCTGTGTCTGGTGGTTCTGCGAAGAAGCTGATGTGTCCTGGATAGAAGTCCTTGAGGACGTTGTGTGTGATTGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAGATCACTGGGGTAGAACTTTCAGTTCCTGGTGTTGATGTCTCTTCTATGTTTCCAAGAGTG---------------GAGTCTGTGGAG---------GTTGTCATTGCTATAGTCTTT--------------GATGTCATCATG-------------------------------------AGCGTGTTGGTGACACTGGAGGGAAATGATGTGGTCATTTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 961703 496 - 74750902 -CAGTTGATGTCTCTGC-----TGTGTTTCCAAGAGTGGAGTCTGT------------------------------------------------------------------------------GGAGGCTGCCATTGTTATAGTCTTTGATACCATCACGGGTATGTTCGTGACACTAGAGAGGGATGAGGCAGCTGTTTCACCTGGAGGAGATGTGTCCTGAGAAACAGTCCCTGTCACA-TTGTGTGCACTTGGGGAGGAGGAAGGAGTTGATGTGATCATCTGTGTGAGGGTGCTCCTTTGAGATTCCCTCGTGGTCTCTGTGCTCTGAGTCTGGTAGTTCTGAGAAGAAGCTGATGTGTCCCAGATAGAGATCCTCGAGGAAGCCGCTGTCCATTGTCCCTCTGGCTCAGCTGTTATGGAGGCTGCTGAAGGGACTGGAGTGGGACTTCTAGTTCTAGGGGTTGATGTCTCCTCAGTGATATTAGAAGTG---------------GACTCTGTGAGG---------GTTGTCACTGTTATAGTCTTT--------------GATTTCATTATG-------------------------------------GGTGTGTTGCTGACACTGAAGGGGAATGAGGTGGTCATTTC i calJac3.chr17 I 1845 C 0 s mm10.chr16 65456798 463 - 98207768 ------------TCCTCAGAGTTGTGTTTCCTGGAGCAGAGTCTGT------------------------------------------------------------------------------AGAGGATGTTTGGGTGAGCACTTCTGTTGTAGTTAGTGATGTACTGCTGACACCAGAAGTAGATGGCTTGGTTCTTTTATCTGAAGATGATGTCACTTGAGACATTGTCTGTGCAGGAGTTGAGT-CACTTGTAGAGGTTGAAAGAGTTGATGTGACT------------ATGTTGACTTGAGATTTGCTGCTGGTCTGCTTGCTTCCAGTGTGTTGTCTCTGAGTAAGAGTTGAGGT------GATGGGTGTT------GACACTGT---TGACATATTCTGGGATGAAGGTGTCAGTGAGACTTGTGCGGTGGCAGGTGTTAAACCTTGAGTTGTTATTGCTGTTGTGTGTCCTGAGTCTACTGAGGTA---------------CTTTCTGTGGAG---------GATGTTGTGGTTAACATGTGT--------------GTTGTACTTGGA-------------------------------------GCTGAGCTGCTGATACTGGGAGCATGTGAGGTGGTTGTTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 29088830 646 + 31377067 ----GTGACGTGTGTCC-----CGTGGTTCCTGCTGGGGTGTCTGTTGCAATCGATGTCGTCGGGACCTGTGATGTCGTTGCTGATGTGTTGCTTCCACTGGAAGATCTTGAAGTGTCACCAGGGGAGGCTGATGGTGTGGCCATTTCTGATAGTGTGGGAACTGTGTGGCTGACACTGGAAGGGGACGAAGTGTTTGGTGTGTCAGACAAGGCCGTGTCCTGGGTCGAGTCATCTGTAGTT-GTGTGTTGACTTTGGGAGGATGAGGGAGAGGATGTGATCATCGCTGAGACACTGCTGGTTGCAGACTCTGTGCTGGTCTCCATGGTCTGGGTCGTGTGACCCTGAGATGACACTGTTGTCTCCGGAGTAGAAGCCAGGGTGGAATGTGCTGTTGAGTGTCCCTCTGGTCCACTTGTCATTGAGCCTGTTGAGCTGACTGGAGTAACACTTCCCGTGACACCTGGTGGCATGAGCCCTGTGTTGCCAGCAGTGCTGTTTCCTACTATTGACTCTGTGGGGACGTGTGATGTTGTTGCTGATGTGTTGCTTTTGCTGGAAGATGAGGTGTCCCCAGGGGAGGCTGATGGTGTGGCCCTTTCTGTCACTGCAGAAGGTGTGTGGCTGACGGTGGAAGGGGACGAAGTGCTTGGTGT i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=47494.000000 s hg38.chr3_KI270935v1_alt 161062 61 + 197351 ATCTGGAGGAGCTGTCTCCTGCGTAACAGTCTCCATCACATTGTGTACACTTGGGGAAGAA s rheMac3.chrUn_JH291127 59073 61 + 111706 ATCTGCAGGAGACGTCTTTTGAGAAACAGTCTCCATCCCATTGAGTACACTTGGGGAAGAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 91921 61 - 187378091 ACCTGGAGTAGATGTCTCCTGAGAAACAGTCTCTGTCACACTGTGTACACTTGGGGAGGAT i papAnu2.chr2 I 1837 C 0 s chlSab2.chr15 442344 61 - 91754291 ATCTGCAGGAGACGTCTTTTGAGAAACAGTCTCCATCCCATTGAGTACACTTGGGGAAGAG i chlSab2.chr15 C 0 I 753 s calJac3.chr17 962199 61 - 74750902 ATCCGGAGGGGATGTCTCCTGAGGAACAGCGTCTGTCACATTCAGTACACTTGGGGAAGAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65457261 61 - 98207768 ATCAGGAGAGATTGTTCTTTGAGAACTTGTCTCTGTCTGTATTTGGTCACGTGAGGAGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089476 61 + 31377067 GTGAGACATGGTCGTGTCCTGGGTTGTGCCATCTGTAGGAGTGTCTCCTCTTTGGGAGGAT i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=3225.000000 s hg38.chr3_KI270935v1_alt 161123 2 + 197351 AA s rheMac3.chrUn_JH291127 59134 2 + 111706 GA i rheMac3.chrUn_JH291127 C 0 I 2256 s papAnu2.chr2 91982 2 - 187378091 GA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443158 2 - 91754291 GA i chlSab2.chr15 I 753 C 0 s calJac3.chr17 962260 2 - 74750902 GA i calJac3.chr17 C 0 C 0 s mm10.chr16 65457322 2 - 98207768 GA i mm10.chr16 C 0 C 0 s canFam3.chr33 29089537 2 + 31377067 GA i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=95649.000000 s hg38.chr3_KI270935v1_alt 161125 97 + 197351 AAGAGTTGATGTCATCATCTGCGTGAGGGTGTCGGTTTGAGCTTTGCTGGTGGTCTCCGTGCTCTTAGTCTGGTGGTTCTGAGATGAAGCTGATATG s rheMac3.chrUn_JH291127 61392 97 + 111706 AAGAGGTAATGTGGACATCTCTGTGAGGGTGCTGGTTTGAGACTCTCTGGTGGTGTCTGTGCTCTGTGTCTGGTGGTTCTGCAAAGAAGCTGATGTG i rheMac3.chrUn_JH291127 I 2256 C 0 s papAnu2.chr2 91984 97 - 187378091 AAAAGTTAATGTGGCCATCTGTGTGAGGGTGCCAGTTTCAGATTCTCTGGTGGTCTCCATGCTCTTAGTCTGGTGGTTCTGAGATGAAGCTGATATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443160 97 - 91754291 AAGAGTTGATGTTATCATCTGTGTGAGGGTGCCAGTTTGAGCTTTGCTGGTGGTCTCTATGCTCTGAGTCTGGTGGTTCTGAGAAGAAGCTGATGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 962262 97 - 74750902 AAGAGTTGACATGGTTCTCTGGGAGAGGGTGCTGCTTTGAGCGTCTCTAGTGGTCTCCGTGCTCGGAGACTGGTGTTTCTGAGAAAAAGCTGAGGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65457324 94 - 98207768 AGGAGTTGATGTGGTCACCTCGGTGGTTGTGGTGGTTTGAGGTTTGC---TGGTCTCCATGCTTGTAGTATGATGGCTCTGAGAAACTGTTGTTATG i mm10.chr16 C 0 T 4747 s canFam3.chr33 29089539 97 + 31377067 GGGAGAGGATGTGATCATCGCTGAGACACTGCTGGTTGCAGACTCTGTGCTGGTCTCCATGGTCTGGGTCGTGTGACCCTGAGATGACACTGTTGTC i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=18106.000000 s hg38.chr3_KI270935v1_alt 161222 20 + 197351 TCCTGATTAGAGGTCCTTGA s rheMac3.chrUn_JH291127 61489 20 + 111706 TCCTGGATAGAAGTCCTTGA i rheMac3.chrUn_JH291127 C 0 I 10256 s papAnu2.chr2 92081 20 - 187378091 TCCTGATTAGAGGTCCTTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443257 20 - 91754291 TCTTGCGTAGAGGTCCTCGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 962359 20 - 74750902 TCCTGAGTAGAGGTCCTTAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65452671 20 - 98207768 ATTTGAATTGAGGTGATGGG i mm10.chr16 T 4747 C 0 s canFam3.chr33 29089636 20 + 31377067 TCCGGAGTAGAAGTCAGGGT i canFam3.chr33 C 0 C 0 e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=24707.000000 s hg38.chr3_KI270935v1_alt 161242 52 + 197351 AGAAGCTGCAGTTGAT-TGTCCCTCTAGTGTCGCTGTTGTTGAGCCTGTTGAG s papAnu2.chr2 92101 52 - 187378091 AGAAGTGGCAGTTGAT-TGTCCCTCGAGTGTCACTGCTGCTGAGCCTGCTGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443277 52 - 91754291 GGAAGTTGTTTGTGAT-TGTCCTTCCAGTTCAGCTGTTATTGAGACTGCTGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 962379 52 - 74750902 GGAAGTTGCTGGTGAT-TGTCCTTCTGGCCCAGCTGTTATTGAGACTGCTGAG i calJac3.chr17 C 0 I 378 s mm10.chr16 65452691 46 - 98207768 TGCTGACACTGTTGACATGTTCTG-------GGATGAAGGTGAGACCTGTGTG i mm10.chr16 C 0 C 0 s canFam3.chr33 29089656 52 + 31377067 GGAATGTGCTGTTGAG-TGTCCCTCTGGTCCACTTGTCATTGAGCCTGTTGAG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=6027.000000 s hg38.chr3_KI270935v1_alt 161294 8 + 197351 GTGACTGG s papAnu2.chr2 92153 8 - 187378091 ATGACTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443329 8 - 91754291 GTCACTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 962809 8 - 74750902 GTGACTGG i calJac3.chr17 I 378 T 756 s mm10.chr16 65452737 8 - 98207768 GTGGCAGG i mm10.chr16 C 0 I 1 s canFam3.chr33 29089708 8 + 31377067 CTGACTGG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=-2145.000000 s hg38.chr3_KI270935v1_alt 161302 2 + 197351 -GG s papAnu2.chr2 92161 2 - 187378091 -GG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 443337 2 - 91754291 -GG i chlSab2.chr15 C 0 I 2617 s calJac3.chr17 962061 2 - 74750902 -AG i calJac3.chr17 T 756 C 0 s mm10.chr16 65452746 1 - 98207768 -G- i mm10.chr16 I 1 C 0 s canFam3.chr33 29089716 2 + 31377067 AG- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=3631.000000 s hg38.chr3_KI270935v1_alt 161304 25 + 197351 CAGCAGTTTTACTTCCAGTTATTAA s papAnu2.chr2 92163 25 - 187378091 CAGGAGTTTTACTTCCAGTTGTTGA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 962063 25 - 74750902 TGGGACTTCTAGTTCTAGGGGTTGA i calJac3.chr17 C 0 C 0 s mm10.chr16 65452747 25 - 98207768 TAGAACCTTGAGTTGTTATTGCTGT i mm10.chr16 C 0 C 0 s canFam3.chr33 29089718 25 + 31377067 TAACACTTCCCGTGACACCTGGTGG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e chlSab2.chr15 443339 2617 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=13756.000000 s hg38.chr3_KI270935v1_alt 161329 25 + 197351 TGTGTCCTCTGTGGTTCCTGGAGTG s papAnu2.chr2 92188 25 - 187378091 TGTTTCCCCTGTGGTTCCCGGAGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 445956 25 - 91754291 TGTTTCCCCTGTGGTTCCTGGAGTG i chlSab2.chr15 I 2617 I 5969 s calJac3.chr17 962088 25 - 74750902 TGTCTCCTCAGTGATATTAGAAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65452772 25 - 98207768 TGTGTGTCTTGTGTCTACTGAGGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 29089743 25 + 31377067 CATGGACCCTGTGTTGACAGCAGTG i canFam3.chr33 C 0 I 3246 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=67.000000 s hg38.chr3_KI270935v1_alt 161354 1 + 197351 A s papAnu2.chr2 92213 1 - 187378091 G i papAnu2.chr2 C 0 C 0 s calJac3.chr17 962113 1 - 74750902 G i calJac3.chr17 C 0 C 0 s mm10.chr16 65452797 1 - 98207768 A i mm10.chr16 C 0 I 7514 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e canFam3.chr33 29089768 3246 + 31377067 I e chlSab2.chr15 445981 5969 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=273.000000 s hg38.chr3_KI270935v1_alt 161355 1 + 197351 a s papAnu2.chr2 92214 1 - 187378091 A i papAnu2.chr2 C 0 I 7105 s calJac3.chr17 962114 1 - 74750902 A i calJac3.chr17 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e chlSab2.chr15 445981 5969 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=100.000000 s hg38.chr3_KI270935v1_alt 161356 1 + 197351 c s calJac3.chr17 962115 1 - 74750902 C i calJac3.chr17 C 0 I 9856 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e chlSab2.chr15 445981 5969 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e papAnu2.chr2 92215 7105 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=0.000000 s hg38.chr3_KI270935v1_alt 161357 100 + 197351 caaaataggcaagcagagagctaaatcatgaatgaactcctattcacaattgctacaaatagaataaaatacctaggaatacagctaacaaaggatgtga e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 445981 5969 - 91754291 I e macFas5.chr2 98696 5347 + 192460366 I e papAnu2.chr2 92215 7105 - 187378091 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=73062.000000 s hg38.chr3_KI270935v1_alt 161457 273 + 197351 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaatcaaaaaagaacccaaatagccaagacaatcctaagcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacgtataaaccaatggaacagaatagataccttggaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaagcaggcaat s papAnu2.chr2 99320 272 - 187378091 aaactaccattcttcacagaatgagaacaaactactttaaaattcatatggaaccaaaaaagagcccgaataACCAAGACagtcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatgg-acaGAATAGAGACCTtggaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaagcaagcaat i papAnu2.chr2 I 7105 C 0 s chlSab2.chr15 451950 272 - 91754291 aaactaccattcttcaaagaatgagaacaaactactttaaaattcatatggaaccaaaaaagagcccgaataaccaagacaatcctaggcaaaaagaacaaagtgggaggctacctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaactgacatatagaccaatgg-acagaatagagaccttggaaataagaccacacatctacaaccatctgatctttgacaaacctgacaaaagcaagcaat i chlSab2.chr15 I 5969 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C e panTro4.chr3 199795713 3000 + 202329955 M a score=147682.000000 s hg38.chr3_KI270935v1_alt 161730 286 + 197351 ggggaaaggattctctattcaataaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggcaggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagctaaaattgacaaatgggatctaattaaactaaagagctctgcaca s panTro4.chr3 199798804 286 + 202329955 ggggaaaggattctctattcaataaatggtgctgggaaaactggttagccatatgcagaaaactgaaactggaccccttcctcacaccttatacaaaaattaactcaaggcgggttaaagacttacatgtaaaaccccaaaccatgaaaaccctagaagaaaacctaggcaataccattcaggacatagacataggcaaagattttatgatgaaatctccaaaagcacttgcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagctctgcaca i panTro4.chr3 M 3000 C 0 s papAnu2.chr2 99592 282 - 187378091 ggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagccccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagctctgcaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 452222 282 - 91754291 ggggaaaggattctct----aataaatggtgctgggaaaactggctagccatatgcagaaaactgaaactggaccccttccttacaccttatacaaaaattaactcaaggtggactaaagacttaaatgtaaagctccaaaccataaaaaccctagaagaaaacctaggcaataccattcaggacataggaatgggcaaagattttatgatgaaatctccaaaagcaattgcaataaaagataaaatagacaaatgggatctaattaaactaaagagctctgcaca i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120914891 0 + 123690457 C a score=82024.000000 s hg38.chr3_KI270935v1_alt 162016 98 + 197351 gcaaaagaaactatcatcagagcaaacaggcaacctacaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca s panTro4.chr3 199799090 98 + 202329955 gcaaaagaaactatcatcagcgcaaacaggcaacctacaaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatccagaatttaca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914891 98 + 123690457 gcaaaagaaattattatcagagcaaacaggcaacctgtgaaatgagaaaatttttgcaatctaaccatctgacagaggtctaatatcccgaatttaca i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 99874 98 - 187378091 gcaaaagaaactatcatcagagcaaacaggaaacctacaaaatgagaaaatttttgcaatctacccatctgagagaggtctaatatccagaatttacc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 452504 98 - 91754291 gcaaaagaaactatcatcagagcaaacaggcaacctacaaaatgagaaaatttttgcaatctacccatctgagagaggtctaatatacagaatttatc i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 98696 5347 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=775392.000000 s hg38.chr3_KI270935v1_alt 162114 621 + 197351 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcaggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaacaaacatatgaaaaaaggctcatcatcatggatcattagagaaatgcaaatcaaaactacaaagggatatcatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacgcttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactatttacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-gaaaaaggaatgggatcatgtcctttgcaggtacatggatgaagctgaaagccatcatcctcaacaaactaacaggggaacaga s panTro4.chr3 199799188 621 + 202329955 aggaacttaaatttacaagaaaaaaataaacaaccccatcaaaaagcaggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaacaaacatatgaaaaaaagctcatcatcatggatcattagagaaatgcaaatcaaaactacaatgggatatcatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacacttttacactgttggtgggagtgtaaatcagttcaaccattgtggaagacagtgtggcgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaagatacatgcacacgtatgtttactgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatgcagcacggaatactatgcagccat-aaaaaaggaatgggatcacatcctttgcaggtacatggatgaagctggaagccatcatcctcaacaaactaacaggggaacaga i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120914989 619 + 123690457 aggaagttaaatttacgagaaaaaaataaacaaccccatcagaaagcgggcaaaggatatgaacagacacttatcaaaagaagacatttatgccaccaaccaac--atgcaaaaaagctcatcatcatggatcattagggaaatgcaaatcaaaaccacaatgggatatcatctcccgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggtgaaataggaacggttttacactcttggtgggagtgtaaattagttcaaccattgtggaagacagtgtggtgattcctcaaggatctagaaccagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggaatataaatcattctgttataaggatacatgtacatgtatctttactgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcagtgatagactggataaagaaaatgtggtacatatacagcacagaatactatgcagccat-aaaaaaggaatgggatcatgtcctttgcaggtacatggatgaagctgaaagccatcatcctcaacaaagtaacagaggaacaga i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 104043 614 + 192460366 aggaatttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatggatcattagagaaatgcaaatcaaaaccacaatgggataccatctcacaccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatatgaacgcttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccatttgactcagccatcccattactggctatatacccaaaggaatataaatc-ttccgttataaagatacatgcacatgtatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcctttgcagggacatggatgaagctggaaga---catcctcagcaaactaacacacgaacaga i macFas5.chr2 I 5347 C 0 s papAnu2.chr2 99972 617 - 187378091 aggaacttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaaggatatg-ataggcacttatcaaaagaagacatttatgccaccagcaaacatatgaaaaaaagcttataatcatggatcattagagaaatgcaaatcaaaaccacaatggaataccatctcatgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatacgaaaacttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctaaaaccagaaataccatttgactcagccatcccattactggttatatacccaaaggaatataaatc-ttccgttataaagatacatgcacatatatgtttattgcagcactattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaagcaatgggatcatgtcttttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacacgaacaga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 452602 618 - 91754291 aggaacttaaatttacaagacaaa---aaacaaacccatcaaaaagtgggcaaagaatatg-ataggcacttatcaaaagaagacatttatgccgccagcaaacatatgaaaaaaagcttataatcatggatcattagagaaatgcaaatcaaaaccacaatgggataccatctcacgccagtcagaatggcaattattaaaaagtcaagaaacagcagatgctggcaaggctgtggagaaatacgaacacttttacactcttggtgggaatgtaaatcagttcaaccattgtggaagacagtgtggggattcctcaaggatctagaaccagaaataccatttgactcagccatcccattactgggtatatacccaaaggaatataaatcattccgttataaagatacatgcacatgtatgtttattgcagcattattcacaatagtaaagacatgaaaccaacccaaatgtccatcactgacagactggataaagaaaatgtggtacatatacagcatggaatactatgcagccataaaaaaaggaatgggatcatgtcttttgcagggacatggatgaagctggaagacatcatcctcagcaaactaacacacgaacaga i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 61509 10256 + 111706 I e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1064113.000000 s hg38.chr3_KI270935v1_alt 162735 640 + 197351 aaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacatggacacagagaggggaacaacacacactggcgcctgtcagggacgggacaaggggaggaagagcgtcaggataaatagctaatacatgcaggtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcctgaaacttaaagt-aaaaaatgaaaagaaataaaAAG-AAAAAATGAAAAATTAATATATCACAACTGTACATATTTGGGGGATAAAAAAATAATAAGAGATGGggccgggcatggtagc-cccacctgcaatcccagcactttgggaggctgagatgggtgg-----------------atcacttgaggtcaggagtgcgagaccagcctgggcaatatggcaaaaccccgtctctactag--aaaaaaaaatacagaaatagctgggcgtggtggtgggtgcctgtaatcccagttactcaaaaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagcagacatcatgccacttcactgcagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaataaataaaataa s panTro4.chr3 199799809 628 + 202329955 aaaccaaacactgcatgttttcactcataagttggagttgaacaatgagaacacttggacacagggaggggaacaacacacaccggcgcctgtcagggacgggacaaggggaggaaaagcgtcaggataaatagctaatacatgcaggtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcccgaaacttaaagt-aaaaaatgaaaagaaataaaAAG-AAAAAATGAAAAATTAATATATCACAATTGTGCATATTTTGGGGATAAAAAAATAATAAGAGATGGggccgggcatggtagc-cccacctgcaatcccagcactttgggaggccaagacgggtgg-----------------atcacttgaggtcaggagtgcgagaccagcctgggcaacatggcaaaaccccgtctctactag--aaaaaaaaatacagaaatagctgggcgtggtggtgggtgcctgtaatcccagttactcaaaaggctgaggcaggagatttgcttgaacccaggaggtggaggttgcagtgagcagacatcatgccactacactgcagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaa------------ i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120915608 640 + 123690457 aaaccaaacactgcatgttctcactcagaagttggagtggaacaatgagaacacatggacccagggaggggaacaacacacaccagcgcctgtcaggggcgggacaaggggaggaagagcgtcaggataaatagctaatgtatgcaggtgatgggttgataggtgcagtaaaccaccatggcacatatatacctgtgtaacaaacctgcacgttctgcacatgtatcccgaaacttaaagtaaaaaaatgaaaagaaaTAAAAAGAAAAAAATGAAAAATTAATATATCACAATTGTACATATTTGAGGGATAAAAAAATAATAAGAGATGGgaccaggcatggtagt-cccacctgcaatccgagcactttgggaggccgagatgagtgg-----------------atcacttgaggtcaggagtgcaagaccagcccaggcaacatggcaaaaccccatctctactagaaaaaaaaaaatacagaaatggctgggcatggtggtgggttcctgtaatcccagctactcaaaaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagcagagatcatgccactgcactgcagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaa----aaaaagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71765 625 + 111706 aaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacagcacatacca-ggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaagtgatgggttgataggtgtagcaaaccaccgtgacacacatatatctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa----aagtgaaataaaaag-aaaaaaTGAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAAAATAATAAGAGATAGggctgggcatggtagctcccacctgcaatcccagcactttgggaggccgaggtgagtggnnnnnnnnnnnnnnnnn---------------------gagaccagcctgggcaacatgacaaaaccccgtctctaccag-aaaaaaaaaatacaaaaatggctgggcatggtggcgggtgcctgtaatcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagcagagatcacgccactgcactccagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaa-------aagag i rheMac3.chrUn_JH291127 I 10256 C 0 s macFas5.chr2 104657 629 + 192460366 aaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacagcacatacca-ggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaagtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa----aagtgaaataaaaAG-AAAAAATGAAAAATTAATATATTGCAATTGTACATATTTGGGGAAT-AAAAAATAATAAGAGATAGggctgggcatggtagctcccacctgcaatcccagcactttgggaggccgaggcgagtgg-----------------atcacttgaggtcaggagtgtgagaccagcctgggcaacatgacaaaaccccgtctctaccag-aaaaaaaaaatacagaaatggctgggcatggtggcgggtgcctgtaatcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagcagagatcacgccactgcactccagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaa-------aagag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 100589 627 - 187378091 aaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacagcacataccagggcctgtagGGGGCGGGACAAGGGGAGGAAGAGtgtcaggataaatagctaatgcatgcaagtgatgggttgataggtgtagcaaaccaccatgacacacatatacctatgtaacaaacctgcatttgcTGCACATGTATCTcgaaacttaaagt-aaaa----aagtgaaataaaaag-aaaaaatgaaaaattaatatattgcaattgtacatatttggggaataaaaaaataataagagatagggctgggcatggtagctcccacctgcaatcccagcactttgggaggccgaggcgagtgg-----------------atcacttgaggtcaggagttcaagaccagcctgggcaacatgacaaaaccctgtctctaccag--agaaaaaaatacagaaatggctgggcatggtggcggatgcctgtaatcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagcagagatcacgccactgcactccagcctgggcgacagagcaagattctgtctcaaaaaaaaaaaa-------aa--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 453220 629 - 91754291 aaaccacacactgcatgttctcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaacagcacatcccagggcctgtagggggcgggacaaggggaggaagagtgtcaggataaatagctaatgcatgcaagtgatgggttgataggtgtagcaaaccaccatggcacacatatacctatgtaacaaacctgcatttgctgcacatgtatctcgaaacttaaagt-aaaa----aagtgaaataaaaAG-AAAAAATGAAAAATTAATATATTGCAATTGTACATATTTGGGGAATAAAAAAATAATAAGAGATAGggctgggcatggtagcttccacctgcaatcccagcactttgggaggccgaggcgagtgg-----------------atcacttgaggtcaggagtgcgagaccagcctgggcagcatgacaaaaccctgtctctaccag--aaaaaaaaatacagaaatggctgggcatgctggcgggtgcctgtaatcccagctactcaaaactctgaggcaggagaatcacttgaacccaggaggtggaggtcgcagtgagcagagatcacgccactgcactccagcctgggtgacagagcaagagtctgtctcaaaaaaaaaaaa-------aa-aa i chlSab2.chr15 C 0 C 0 e mm10.chr16 65452798 7514 - 98207768 I e canFam3.chr33 29089768 3246 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=9487.000000 s hg38.chr3_KI270935v1_alt 163375 9 + 197351 aaaaGGAGA-- s panTro4.chr3 199800437 6 + 202329955 ---aggaga-- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916248 9 + 123690457 agagagaga-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72390 9 + 111706 agagagaga-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105286 9 + 192460366 agagagaga-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101216 9 - 187378091 aaagagaga-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 453849 9 - 91754291 aaagagaga-- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29093014 9 + 31377067 --AACAAGACT i canFam3.chr33 I 3246 C 0 e mm10.chr16 65452798 7514 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=150254.000000 s hg38.chr3_KI270935v1_alt 163384 64 + 197351 GAGAGATGGGGGTGCAGGATTCCCACAGAGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT s panTro4.chr3 199800443 64 + 202329955 gagagaTGGGAGTGCAGTATTCCCACAGAGGAAGGCCCCTGATAAGCACTGCTTCA-AATCGCCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916257 63 + 123690457 GAGAGATAGGGGTGCCGAATTCCCACAGAGGAAGGCCCCTGATAGGCACTGCTTC--AATCGTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72399 64 + 111706 gagaGATGGGGGTGCAGGATCCCCACGGAGGAAGGCCCCTGAGAAGCACTGCTTCA-AATCGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105295 64 + 192460366 gagagaTGGGGGTGCAGGATCCCCACGGAGGAAGGCCCCTGAGAAGCACTGCTTCA-AATCGCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101225 64 - 187378091 gagagatgggggtgcAGGATCCCCACGGAGGAAGGCCCCTGAGAAGCACTGCTTCA-AATCGCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 453858 64 - 91754291 gagaGATGGGGGTGCAGGATCCCCACAGAGGAAGGCACCTGAAAAGCACTGCTTCA-AATCGCCT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65460312 64 - 98207768 GAGAGGTGGCAGTGCAGGCTTCCCACAGA-GAAGCCAGCTGCTCAGGGTGGCTTCAGAACCACCT i mm10.chr16 I 7514 I 1200 s canFam3.chr33 29093023 63 + 31377067 AAAGGGTGGAGGTGCAGGATTCCTACAGAGTAAGGCACCTGATCAGGACTGCTGCA-AATTGTT- i canFam3.chr33 C 0 C 0 e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=54862.000000 s hg38.chr3_KI270935v1_alt 163448 28 + 197351 AGAAAAAGCACAGTTGCAGGAATATAGC s panTro4.chr3 199800507 28 + 202329955 AGAAAAAGCACAGTTGCAGGAATATAGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916320 28 + 123690457 AGAAAAAGCACAGTCGCAGGAATATAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72463 28 + 111706 AGAAAAAGCACAGTCCCAGGAGTACAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105359 28 + 192460366 AGAAAAAGCACAGTCCCAGGAGTACAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101289 28 - 187378091 AGAAAAAGCACAGTCCCAGGAGTACAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 453922 28 - 91754291 AGAAAAAGCACAGTCCCAGGAGTATAGC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29093086 28 + 31377067 ACAAAAGAAAAGATTTCAGAAATATAAC i canFam3.chr33 C 0 I 288 e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=44691.000000 s hg38.chr3_KI270935v1_alt 163476 25 + 197351 CAATGGTCTTCTCCAGCTCCCGCCT s panTro4.chr3 199800535 25 + 202329955 CAATGGTCTTCTCCAGCTCCCACCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916348 25 + 123690457 CAATGGTCTTCTCCAGCTCCCGCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72491 25 + 111706 CCATGGTCTTCTCCAGCTCCCGGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105387 25 + 192460366 CCATGGTCTTCTCCAGCTCCCGGCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101317 25 - 187378091 CCATGGTCTTCTCCAGCTCCCGGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 453950 25 - 91754291 CAATGGTCTTCTCCAGCTCCCGGCT i chlSab2.chr15 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093114 288 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=382956.000000 s hg38.chr3_KI270935v1_alt 163501 215 + 197351 GTCTTCCTTGTGAGGAGGAAGGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGCAAACAGTACCCCTGCTATAAGCCGGGTTAACTCTCTCAACTTGAATT-ATAGCATTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTTTTCTTTTTCGTTGTTAACATCTGTGCCAATCT-AGTAAAAAACCCAAGGGGTAA s panTro4.chr3 199800560 215 + 202329955 GTCTTCCTTGTGAGGAGGAAAGTGAGGTTAGACTAGAATGGTGAATTAACTGTGTTAAACTCCATGGGAAGAGGGAAACAGTACCCCTGCTATAAGCCGGGTTAACTCTCTCAACTTGAATT-ATAGCATTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTTTTCTTTTTCGTTGTTAACATCTGTCCCAATCT-AGTAAAAAACCCAGGGGGTAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916373 214 + 123690457 ATCTTCCTTGTGAGGGGGAAGGTGAGGTTAGACTAGAATGGTGAATGAACTGTGTTAAACTCCATGGGAAAAGGGAATCAGTACCTCTGCTATAAGCTGGGTTAACTCTCTCAACTTGAATT-ATAGCATTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTTTTCTTTTTCGTTATTAACATTTGTCCCAATCT-AGTAAAAAACCCAA-GGGTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72516 211 + 111706 GTCTTCGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGAAACGGTACC-CTGCTGTAAGCCGGGTTAACTCTCTCACCTTGAATT-ACAGCGTTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTGTTCTGTTTCG---TTAACATTTATCCCAATCT-AATAAAAAACCCAAGCGGTAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105412 211 + 192460366 GTCTTCGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGAAACGGTACC-CTGCTGTAAGCCGGGTTAACTCTCTCACCTTGAATT-ACAGCGTTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTGTTCTGTTTCG---TTAACATTTATCCCAATCT-AATAAAAAACCCAAGCGGTAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101342 214 - 187378091 GTCTTCGTTGTGGGGAGGAAGGTAAGGTTAGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGGAAGACGGCAACGGTACC-CTGCTGTAAGCCGGGTTAACTCTCTCACCTTGAATTAACAGcgttatcttttttaaaaaata-----aattaaatttctacTGTTCTGTTTCG---TTAACATTTATCCCAATCTAAATAAAAAACCCAAGCGGTAA i papAnu2.chr2 C 0 M 50 s chlSab2.chr15 453975 211 - 91754291 GTCTTCCTTGTGGGGAGGAAGGTAAGGTTGGACTAGAATGGTGAATGAACTGTTTTAAACTCCATGGCAAGACGGAAACAGTACC-CTGCTGTAAGCCGGGTTAATTCTCTTACCTTGAATT-ACAGCATTATCTTTCTT-AAAAATA-----AATTAAATTTCTACTGTTCTGTTTCG---TTAACATTTATCCCAATCT-AATAAAAAACCCAAGCGGTAA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29093402 181 + 31377067 GTTTTCCTTATGAAGAGGAGGACAAGGTTAGACTAGAATGGTTACCAGACTGTTTTAAACCCCTC----AGTGGGAGACAAT------------------GTTAGCTCTTGCA----GAACT-AGAACatt-------tt-aaaaataataataattaaatGTCTACTTCCCCCCCTCATCTTAAACATTTGT-----TCT-AGC-AGAAACCTAAGGAGTAA i canFam3.chr33 I 288 C 0 e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=93599.000000 s hg38.chr3_KI270935v1_alt 163716 67 + 197351 ATGCATATACTCTTGCCCTGGTCACAGACTACCAAGAAGCTAATATTATTGACCATAACCACTTTTT s panTro4.chr3 199800775 67 + 202329955 ATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGACCATAACCACTTTTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916587 67 + 123690457 ATGCATATACTCTTGCCCTGGTCACAGACTACCATGAAGCTAATATTATTGATCATAACCACTTTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72727 67 + 111706 ATGCATATACTCTCGTCCTGGTCACAGACTACCATGAAGCTAATATCATCGGTCATAACTACTTTTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 105623 67 + 192460366 ATGCATATACTCTCGTCCTGGTCACAGACTACCATGAAGCTAATATCATTGGTCATAACTACTTTTT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 454186 67 - 91754291 ATGCATATACTCTTGTCCTGGTCACAGACTACCATGAGGCTAATATCATTGGTCATAACTACTTTTT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29093583 64 + 31377067 GTGTACATATTCTATCTCTCATCATGTCATACAAT---GTTAATTTAATTGATCATGTCTATTTTTT i canFam3.chr33 C 0 I 8 e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e papAnu2.chr2 101556 50 - 187378091 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=100392.000000 s hg38.chr3_KI270935v1_alt 163783 81 + 197351 AAAAAAAAATTATTTCCCAGGCAGAggccaggcatggtggctcatgtctgtaatcccagcattttgggaggccaaggtggg s panTro4.chr3 199800842 80 + 202329955 TAAAAAAAATTATTTCCCAGGCAGAggccaggcatggtggctcatgtctgtaatcccagcattttgggaggcc-aggtggg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916654 81 + 123690457 AAAAGAAAATTATTTCCCAGGCAGAggccaggcatggtggctcatgtctgtaatcccagcattttgggaggccaaggtggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72794 81 + 111706 TTTAAAACATTATTTCCCAGGCAGAggccaggcatggtagctcatgtctgtaatcccagcactttgggagtccaaggtggg i rheMac3.chrUn_JH291127 C 0 I 599 s macFas5.chr2 105690 81 + 192460366 TTTAAAACATTATTTCCCAGGCAGAggccaggcatggtggctcatgtctgtaatcccagcactttgggagtccaaggtggg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 454253 81 - 91754291 TAAAAAACATTATTTCCCAGGCAGAggccaggaatggtggctcatgtctgtaattccagcactttgggagtccaaggtggg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093647 8 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e papAnu2.chr2 101556 50 - 187378091 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=12159.000000 s hg38.chr3_KI270935v1_alt 163864 14 + 197351 aggatcactcgagg s panTro4.chr3 199800922 14 + 202329955 aggatcacttgagg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916735 14 + 123690457 aggatcacttgagg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 105771 14 + 192460366 aggaccacttgagg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 454334 14 - 91754291 aggaccacttgagg i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093647 8 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e papAnu2.chr2 101556 50 - 187378091 M e ponAbe2.chr3 199797169 30000 + 202140232 M a score=101352.000000 s hg38.chr3_KI270935v1_alt 163878 115 + 197351 ccaggagtttgagaccagcctgggcaagatagcgagaccctgtgtcttaaaaaataaaaataataataataataataataataataataataGATATTAAATAAATAAAGAAAAA s panTro4.chr3 199800936 96 + 202329955 ccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaaaaataaa---------------aataataataataaaaatagatat----taaataaagaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916749 95 + 123690457 ccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaaaaataaa---------------aata-----aAAAAAAATAAATATTAAATAAATAAAGAAAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 105785 98 + 192460366 ccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtctTAAAtagtaat---------------agtaataataataataat--atattaaataaagaaagaaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101606 95 - 187378091 ccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaatagtaa------------------taataataataataat--atactaaataaagaaagaaaaa i papAnu2.chr2 M 50 C 0 s chlSab2.chr15 454348 95 - 91754291 ccaggagtttgagaccagcctgggcaacatagcgagaccctgtgtcttaaatagtaa------------------taataaTAATAATAAT--ATACTAAATAAAGAAAGAAAAA i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093647 8 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=306529.000000 s hg38.chr3_KI270935v1_alt 163993 221 + 197351 TATTTCCCAGGCAGAATGTTTAAATATTGGC-TTTTTTTGTTTAAAATATTT-CACAGCACCTG--CACTAGCCACATAC----------------------------CATCTTCGTGAATATTACCTT---AGCCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTTGCC--------------------------------TTTTTTTTTCTCTTAGAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTTCTTTC-TTTTTTCTTT------- s panTro4.chr3 199801032 223 + 202329955 tatttCCCAGGCAGAATGTTTAAATATTGGCTTTTTTTTGTTTAAAATATTT-CACAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCTTGAATATTACCTT---AGTCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTTGCC--------------------------------TTCTTTTTTCTCTTAGAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTTCTTTCTTTTTTTCTTT------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120916844 223 + 123690457 TATTTCCCAGGCAGAATGTTTAAATATTGGC-TTTTTTTGTTTACAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCTTGAATATTACCTT---AGTCTCTGAGTCTCTGAA--CTAAGAAGAAACCAAGAAAACTTGCC------------------------------TTTTCTTTTTTCTTTTAGAAACTGACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAACTTCTTTC-TTTTTCCTTT------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 105883 211 + 192460366 taTTTCCCAGGCAGAATGTTTAAATATTGGA-TTTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCCTGAATATTACCTT---AGTCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACTTGCT-----------------------------------TTTTTTTTCTTAGAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAAC--------TTTTTTCTTT------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101701 211 - 187378091 tatttcccagGCAGAATGTTTAAatattgga-tttttttgtttaaaatattt-catagcaCCTA--CACTAGCCACATAC----------------------------CATCTTCCTGAATATTACCTT---AGTCTCTGAGtctctgaa--ccaggaagaaaccaagaaaacttgct-----------------------------------tttttttccttagaaactTACTCTTTTGGGTTTTCATTAGttcccaagctgttctcaaac--------ttttttcttt------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 454443 211 - 91754291 TATTTCCCAGGCAGAATGTTTAAATATTGGA-TTTTTTTGTTTAAAATATTT-CATAGCACCTA--CACTAGCCACATAC----------------------------CATCTTCTTGAATATTACCTT---AGTCTCTGAGTCTCTGAA--CCAAGAAGAAACCAAGAAAACCTGCT-----------------------------------TTTTTTTTCTTAGAAACTTACTCTTTTGGGTTTTCATTAGTTCCCTAGCTGTTCTCAAAC--------TTTTTTCTTT------- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29093655 289 + 31377067 TATCTGGTAGGCAGGATATTTAAGTATCAAA-TTGTTCGGTTTAAAATATTTGTACTCCCACTAGTCACTAGTCACAGACAAAGCCTCAGTCAACCAGTAGACCCGATCATCCCCCTGAATTTTACCTTTAGGGACTTTGAGTCTTTTAAATCAAAGAAGAAACCCCAAAACATTGAGTCTTTTTGTGTGTGTGTTTttttgttttgttttgttttgttttTTTAGGAACTTACTCTTTTTGGTTTTCATTAGCTCCCTAGCTGTATTCAAAC--------ATTTTTTTTTTAACCTC i canFam3.chr33 I 8 I 444 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=23437.000000 s hg38.chr3_KI270935v1_alt 164214 27 + 197351 TTAAACATATATATATATaga-------gagaga s panTro4.chr3 199801255 27 + 202329955 TTAAACATATATATATagaga-------gagaga i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917067 27 + 123690457 TTAAACatatatatatatata-------tatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106094 34 + 192460366 TTAAACatatatagatagatagatattttatata i macFas5.chr2 C 0 I 105 s papAnu2.chr2 101912 27 - 187378091 ttaaacatatatagatagaca-------tatata i papAnu2.chr2 C 0 I 31 s chlSab2.chr15 454654 27 - 91754291 TTAAACatatatagatagata-------tagata i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1054.000000 s hg38.chr3_KI270935v1_alt 164241 2 + 197351 ga s panTro4.chr3 199801282 2 + 202329955 ga i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917094 2 + 123690457 ta i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 101970 2 - 187378091 ga i papAnu2.chr2 I 31 C 0 s chlSab2.chr15 454681 2 - 91754291 ga i chlSab2.chr15 C 0 I 39 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 106128 105 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=-2900.000000 s hg38.chr3_KI270935v1_alt 164243 8 + 197351 -----------------------gagaagaa- s panTro4.chr3 199801284 8 + 202329955 -----------------------gagagaga- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917096 8 + 123690457 -----------------------tatatata- i nomLeu3.chr11 C 0 I 9 s papAnu2.chr2 101972 32 - 187378091 tagatattttatatatatatatatatatatat i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 454683 39 - 91754291 I e macFas5.chr2 106128 105 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2918.000000 s hg38.chr3_KI270935v1_alt 164251 7 + 197351 agagaga s panTro4.chr3 199801292 7 + 202329955 agaaaga i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917113 7 + 123690457 atataga i nomLeu3.chr11 I 9 C 0 s papAnu2.chr2 102004 7 - 187378091 agagaga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 454722 7 - 91754291 atatata i chlSab2.chr15 I 39 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 106128 105 + 192460366 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=16978.000000 s hg38.chr3_KI270935v1_alt 164258 13 + 197351 gagagagaaagaa s panTro4.chr3 199801299 13 + 202329955 gagagagagagaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917120 13 + 123690457 gagagagagagag i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106233 13 + 192460366 gagagagagagag i macFas5.chr2 I 105 C 0 s papAnu2.chr2 102011 13 - 187378091 gagagagagagag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 454729 13 - 91754291 gagagagagagag i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 72875 599 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=462993.000000 s hg38.chr3_KI270935v1_alt 164271 262 + 197351 agagagagagagaaagagagacagggtcttctgtcacccaggctgaagttcagcggtg-taatTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtaatttttttatttctgtagaggtggaatcttgctatgttgcctaggctgctgtcgaactcccggcctcaagcgatcctcctgcttcagactctcaaagtactgggattaaaggtgtgagccaccgctcccACCC-TTTTTTTCAACCTCAGT s panTro4.chr3 199801312 262 + 202329955 agagagagagagaaagagagacagggtcttctgtcacccaggctgaagttcagcggtg-taattggccttctgagtagctgggactacaggcacacacaaccatgcctgggtaatttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtcgaactcccggcctcaagcgatcctcctgcttcagactctcaaagtactgggattaaaggtgtgagccaccgctcccACCC-TTTTTTTCTACCTCAGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917133 262 + 123690457 agagagagagagagagagagagagGGTCTTCTGCCACCCAGGCTGAAGTCCAGCGGTG-TAATTGgccttctgagtagctgggactacaggcacacacaatcatgcctgggtaatttttttatttttgtaaaggtggaatcttgctatgttgcctaggctggtgtcgaactcctggcctcaagcgatcctcctgcttcagcctctcaaagtaccgggattaaatgtgtgagccaccgctcccACCC-TTTTTTTTAACCTCAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73474 263 + 111706 aGAGAGAGAGAGAGAGGGAAACAAGGTCTTCTGTCCCCCAGGCTGAAGTTCAGCCGTG-TAATTGgccttctgagtagctgggactacaggcacacacaaccacgcctgggtcatttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaactcccggcttcaagtgatcctccggcttcagcctctcaaagcactgggattaaaggtgtgaaccaccgctcccACCCTTTTTTTTAAATCTCAGT i rheMac3.chrUn_JH291127 I 599 C 0 s macFas5.chr2 106246 263 + 192460366 agagagagagagagagGGAAACAGGGTCTTCTGTCCCCCAGGCTGAAGTTCAGCCGTG-TAATTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtcatttttttatttttgtagaggtggaatcttgctatgttgccaaggctggtgtggaactcccggcttcaagtgatcctccggcttcagcctctcaaagcactgggattaaaggtgtgaaccaccgctcccACCCTTTTTTTTAAACCTCAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102024 261 - 187378091 agagagagagagagagagagacagagtcttctgtcccccaggctgaagttcagcgGTG-TAATTGGCCttctgagtggctgagactacaggcacacacaaccatgcctgggtcacttttttatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaactcccggcctcaagtgatcctcctgcttcagcctctcaaagcactggaa-tataggtgtgaaccaccgctccCACCC-tttttttAAACCTCAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 454742 264 - 91754291 agagagagagagagagagagagagTGTCTTCTGTCCCCCAGGCTGAAGTTCAGCGGTGTTAACTGgccttctgagtagctgggactacaggcacacacaaccatgcctgggtcattttttaatttttgtagaggtggaatcttgctatgttgcctaggctggtgtggaactcccggcctcaagtgatcctcctgcttcagcctctcaaagcactgggattaaaggtgtgaaccactgctcccACCCTTTTTGTTAAACCTCAGT i chlSab2.chr15 C 0 C 0 e mm10.chr16 65460376 1200 - 98207768 I e canFam3.chr33 29093944 444 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=183737.000000 s hg38.chr3_KI270935v1_alt 164533 93 + 197351 GCTCCTAGATAGTTGGCA-------AGATGATACT--CAGAGAGACAAAGTCTCAGGGAAGAATTCAGCTTCAAGTCCACTTTCTGGAATTGActgtaattc- s panTro4.chr3 199801574 93 + 202329955 GCTCCTAGATAGTTGGCA-------AGATGATATT--CAGAGAGACAAAGCCTCAGGGAAGAATTTAGCTTCAAGTCCACTTTCTGGAATTGActgtaattc- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917395 92 + 123690457 GCTCCTAGATAGTTGGCA-------AGATGATATT--CAGAGAGACAAAGTCTCAGGGAAGAATTTAGGTTCAAGTACACTTTCTGGAATTGACTA-ATTCC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73737 93 + 111706 GCTCCCAGATAGTTGGCA-------Agatgatatt--cagagagataaagtctcagggaagaatttaggctcaagtacactttctggaattgactgtaattc- i rheMac3.chrUn_JH291127 C 0 I 342 s macFas5.chr2 106509 93 + 192460366 GCTCCCAGATAGTTGGCA-------Agatgatatt--cagagagataaagtctcagggaagaatttaggctcaagtacactttctggaattgactgtaattc- i macFas5.chr2 C 0 I 1 s papAnu2.chr2 102285 93 - 187378091 GCTCCTGGATAGTTGGCA-------AGATGATATT--CAGAGAGATAAAGCCTCAGGGAAGAATTTAGGCTCAAGTACACTTTCCGGAATTGACTGTAATTT- i papAnu2.chr2 C 0 I 2 s chlSab2.chr15 455006 93 - 91754291 GCTCCCAGATAGTTGGCA-------Agatgatatt--cagagagataaagtctcagggaagaatttaggctcaagtacactttctggaattgactgtaattc- i chlSab2.chr15 C 0 I 1 s canFam3.chr33 29094388 99 + 31377067 gctcccaggagggtcacaaaccaacagataaagttcacagaaagacaaactcccagagaaga----aagtttgagtgcagttcctggagttgactataattcc i canFam3.chr33 I 444 C 0 e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=7425.000000 s hg38.chr3_KI270935v1_alt 164626 4 + 197351 gcca s panTro4.chr3 199801667 4 + 202329955 gcca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917487 4 + 123690457 GCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106603 4 + 192460366 gcca i macFas5.chr2 I 1 C 0 s papAnu2.chr2 102380 4 - 187378091 GCCA i papAnu2.chr2 I 2 C 0 s chlSab2.chr15 455100 4 - 91754291 gcca i chlSab2.chr15 I 1 C 0 s canFam3.chr33 29094487 4 + 31377067 acca i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 73830 342 + 111706 I e mm10.chr16 65460376 1200 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=24863.000000 s hg38.chr3_KI270935v1_alt 164630 12 + 197351 ccttctcttctt s panTro4.chr3 199801671 12 + 202329955 ccttctcttctt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917491 12 + 123690457 CTTTCTCTTCTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106607 12 + 192460366 ctttctcatctt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102384 12 - 187378091 CTTTCTCATCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455104 12 - 91754291 ctttctcatctt i chlSab2.chr15 C 0 C 0 s mm10.chr16 65461576 12 - 98207768 CCTTCCCTTCCT i mm10.chr16 I 1200 C 0 s canFam3.chr33 29094491 12 + 31377067 ctttctcttctt i canFam3.chr33 C 0 I 216 e rheMac3.chrUn_JH291127 73830 342 + 111706 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=20765.000000 s hg38.chr3_KI270935v1_alt 164642 12 + 197351 cagacagtaact s panTro4.chr3 199801683 12 + 202329955 cagacagtaatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917503 12 + 123690457 AAGACAGCAATT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 106619 12 + 192460366 aagagagcaatt i macFas5.chr2 C 0 I 311 s papAnu2.chr2 102396 12 - 187378091 AAGAGAGCAATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455116 12 - 91754291 aagagagcaatt i chlSab2.chr15 C 0 C 0 s mm10.chr16 65461588 12 - 98207768 GAGAGAGCCATT i mm10.chr16 C 0 C 0 s canFam3.chr33 29094719 12 + 31377067 aagaaagcaatt i canFam3.chr33 I 216 C 0 e rheMac3.chrUn_JH291127 73830 342 + 111706 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=385047.000000 s hg38.chr3_KI270935v1_alt 164654 160 + 197351 tagactctcaagtgagtgataatggttatggaccagctctaattgttaaaa----aagtgactcacgtgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCACGGGCTGAACCGCAGAGCCCTCTG- s panTro4.chr3 199801695 160 + 202329955 tagactctcaagtgagtgataatggttatgaaccagctctaacagttaaaa----aagtgactcacgtgcaagcttctgcacttcattaatagtaactgcttactggtgacacacttGTAAACCGACGTGGACAAAGGCACGGGCTGAACCACAGAGCCCTCTG- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917515 160 + 123690457 TAGACTCTCAAGTGAATGATAATGGTTAtgaaccagctctaattgttaaaa----aagtgactcacttgcaagcttctgcacttcattaatagtaactgcttactagtgacacacttgtaaactgaCGTGGACAAAGGCACGGACTGAACTGCAGAGCCCTCTG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74172 160 + 111706 tagactctcaagtgagtgagaatggttatgaatcagctctaattgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGCCACGGACTGAACTGCAGAGCCCGCTG- i rheMac3.chrUn_JH291127 I 342 C 0 s macFas5.chr2 106942 160 + 192460366 tagactctcaagtgagtgagaatggttatgaatcagctctaattgttaaaa----aagcgactcactcgcaagcttctgcacttcattaatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGCCACGGACTGAACTGCAGAGCCCGCTG- i macFas5.chr2 I 311 C 0 s papAnu2.chr2 102408 160 - 187378091 TAGACTCTCAAGTGAGTGAGAATGGTTATGAATCAGCTCTAATTGTTAAAA----AAGTGACTCACTCGCAAGCTTCTGTACTTCATTAATAGTAACTGCTTGCTGGTGACACGCTTCTAAACCCACGTGGACAAAGGCACGGACTGAACCGCAGAGCCCGCTG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455128 160 - 91754291 tagactctcaagtgagtgagaatggttatgaatcagctctaattgttaaaa----aagcgactcactcgcaagcttctgcacttcaataatagtaactgcttgctggtgacacacttcTAAACCCACGTGGACAAAGGCACGGGCTGAACTGCAGAGCCCGCTG- i chlSab2.chr15 C 0 C 0 s mm10.chr16 65461600 157 - 98207768 CAGACTTTCAAGTGAGAGA----AGTTGTGAATCGGCTCTAATTTACACAAGT-CGAGTGACTCACCCGCAAACCAGTGTACTTTATTAATAG-AACTGCTTCCTGG-GAGAACTGTCTAAACTTTTGTAGACAAAGGAGTGGGCGGAGCTGCAGAGTACCTTG- i mm10.chr16 C 0 I 2469 s canFam3.chr33 29094731 165 + 31377067 tagactttcaggttagtgagagtgattatgagtcaactctaattttttaaaatataagtgactcatttgcaagctcctgtactttgttaatagtaattaatgacaggtgacacacttctaagctggtGTGAACAAATGCACAGGTTGAGCTCCAGAGCTGAGTTT i canFam3.chr33 C 0 C 0 e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=292657.000000 s hg38.chr3_KI270935v1_alt 164814 165 + 197351 GGAGGTCCCTGGGCCCCTGGCTTAATCCAAAATGACTCCACTTCAACTTTAAACGGAAACTTCCTTTAGTTGGAATTAGGTTGAGATTTGTTGATAGGACTCTAAACTCGATGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT s panTro4.chr3 199801855 94 + 202329955 GGAGGTCCCTGGGCCCCTGGCTTAATCCAAAATGACTCCACTTCAA-----------------------------------------------------------------------CTTTCTCCTGGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917675 166 + 123690457 GGAGGTCGCTGGGCCCCTGGCTTAATCCAAAATGACTCCACTTCAACTTTAAATGGAAACTTCCTTTAGTCGGAATTATGATGACATTTGTTGATAGGACTCTAAATTCGATGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTTGGGTTTCTCCGAGTAAGGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74332 165 + 111706 GGAGGTCCCTGGGCCCCTGGCTTAATCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACTCTAAACTCGACGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATAAGGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 107102 165 + 192460366 GGAGGTCCCTGGGCCCCTGGCTTAATCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACtctaaactcgacgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102568 165 - 187378091 GGAGGTCCCTGGGCCCCTGGCTTAATCCGAAATGACTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGTTGGAATTATGATGAGATTTGTTGATAGGACTCTAAACTCGACGCCTGCTTTCTCCTAGAGAAAATTTGCAAAACTT-GGTTTCTCCAAATaaggtt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455288 165 - 91754291 GGAGGTCCCTGGGCCCCTGGCTTAATCCGAAATGGCTCTGCTTCAACTTTAAACAGAAACTTCCTTTAGCTGGAATTATGATGAGATTTGTTGATAGGACTCTACactcaatgcctgctttctcctagagaaaatttgcaaaactt-ggtttctccaaataaggtt i chlSab2.chr15 C 0 I 330 s canFam3.chr33 29094896 161 + 31377067 GGGGGTCCTTGGGTCCCTACTTAACACCCAAATAAGTCTACTTTAACCTTAAAAGGAGACTTCCTTTATTCAAAAT---AAGTAGATTTGCTTATAGGACTTCCAATTCTATGCTTGAACCCTCTTCAATAAAGTTC-CAAAATTT-GGTTTCTCCAGATAACGTT i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=389713.000000 s hg38.chr3_KI270935v1_alt 164979 185 + 197351 TAAATTTAAAAACATTCTCTATGCAGTTATTTTTAACCTTATTTCATTTCCCTGATAACATAATTAAGAGcatttgtctatcatcaggctttgagt----agacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggcaattaacatcttttcagagcctgcatcacctctgctaaa s panTro4.chr3 199801949 189 + 202329955 TAAATTTAAAAACATTCTCTATGCAGTTATTTTTAACCTTATTTCATTTCCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggccattaacatcttttcagagcctgcatcgcctctgctaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120917841 167 + 123690457 TAAATTTAAAAACATTCTCTATGCAGTTATTTTTAACCTTATTTCATTTCCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggggccaaactttctgaat---gtgtaaattcttggcaattaaca----------------------tctgctcaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74497 189 + 111706 TAAATTTAAAAACATTCTCCACGCAGTTATTGTTAACCTTACTTCATTTTCCTGAGAACATAATTAAGAGcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i rheMac3.chrUn_JH291127 C 0 I 3 s macFas5.chr2 107267 189 + 192460366 taaatttaaaaacattctccacgcagttattgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgccaaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102733 189 - 187378091 taaatttaaaaacattctccACGCAGTTATTGTTAACCTTACTTCATTTTCCTGAGAACATAATTAAGAGCATTTGTCTATCATCAGGCTTTGAGTAAACAGACAGGAGCTATCTAGGTGCCAAACTTTCTGAAC---GTGTAAATTCTTGGCAATTAACAACTTTTCAGAGCCTGCATCAGCTCTTTTACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455783 189 - 91754291 taaatttaaaaatattctctacgcagttattgttaaccttacttcattttcctgagaacataattaagagcatttgtctatcatcaggctttgagtaaacagacaggagctatctaggtgctcaactttctgaac---gtgtaaattcttggcaattaacatcttttcagagcctgcatcaGCTCTTTTACA i chlSab2.chr15 I 330 I 3 s canFam3.chr33 29095057 190 + 31377067 -TAGGTTAGAAACATTCCCTACACAATTATCATTAACCTTATTTCATTTTCCTGAGAACATAAATAAAAGCATTC-TCTATTATCAGACTTTGAGATACCAGCCAGAAGCTATAGACATGCCAAACTTACTAAATTTATTATAGATTCTTGGCAATTAATATATTTTCAGAACTTGCATCACCTCTGTTAAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=6039.000000 s hg38.chr3_KI270935v1_alt 165164 27 + 197351 atcagtgtcagcagcagaagtttcatg s panTro4.chr3 199802138 27 + 202329955 atcagtatcagcagcagaagtttcatg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120918008 27 + 123690457 atcagtatcaGCAGCAGAAGTTTGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 107456 3 + 192460366 --------------------TCT---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102922 3 - 187378091 --------------------TCT---- i papAnu2.chr2 C 0 C 0 s canFam3.chr33 29095247 27 + 31377067 ATCAGTATTAGCAGCAAAAGTTTCATG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 74686 3 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 455972 3 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=623418.000000 s hg38.chr3_KI270935v1_alt 165191 332 + 197351 acagCACCGTCC-----TTTT-TTTTAAAGTAAAGATTTTTGTAGTTCTTTATAAAAGTGGCACAGCtccattt-cagcaatatggaagaagagataagcctctaatagcaaaaccagccgatgccagataaatacaggttataaatgtaataaatgttttctaatgcagaggtgagatgagaagaaagaaagggaaacactcaggagtgaagaaGTTAACAACTAAGATGGTGAGTC----AATGCCCTTG-GAAATGTGCTGA----------CTGAAAGGCTGAA-------------AAAGGAAAGGAAGCAAGACCCTCGGTCACGACACTG--AACTGAGTTTC-CCTGCAAAAAGCTGGAACC s panTro4.chr3 199802165 332 + 202329955 acagCACCGTCC-----TTTT-TTTTAAAGTAAAGATTTTTGTAGTTCTTTATAAAAGTGGCACAGCTCCGTTT-CAGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATACAGGTTATAAATGTAATAAGTGTTTTCTAATGCAGAGGTGAGATGAGAAGAAAGAAAGGCAAACACTCAGGAGTGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTTG-GAAATGTGCTGA----------CTGAAAGGCTGAA-------------AAAGGAAAGGAAGCAAGACCCTCGGTCACGACACTG--AACTGAGTTTC-CCTGCAAAAAGCTGGAACC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120918035 331 + 123690457 ACAGCACCATCC-----TTTT-TTTTAAAATAAAGATTTTTGTAGTTCTTTATAAAAGTGGCACAGCTCCGTTT-CAGCGATATGGAAGAAGAGATAAGCCTCTAATAGCAAAACCAGCCGATGCCAGATAAATGCATGTCATAAATGTAATAAGTATTTTC-AATGCAGAGGTGAGATGAGAAGAAAGAAAGGGAAGCACTCAGGAGAGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTTG-GAAATGTGCTGA----------CTGAAAGGATGAA-------------AAAGGAAACGAAGCAAGACCTTCGGTCACGACACTG--AACTGAGTTTC-CCTGCAAAAAGCTGGAAcc i nomLeu3.chr11 C 0 I 3742 s rheMac3.chrUn_JH291127 74689 328 + 111706 ACAGCACCATCC-----TTTT-TTT-----TAAAGATTTTTGT--TTCTTTATAAAAGTGGCACAGCTCCGTTT-TAGTGATAGGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCC-GTTAAATACATGTTATAAATGTAACAAATGTTTTCTAATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTTG-GAAATTTGCTGA----------CTGAAAGGCTGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGGTCAGGACACTG--CCCTGAGTTTC-CCTGCAAAAAGCTGGAACC i rheMac3.chrUn_JH291127 I 3 C 0 s macFas5.chr2 107459 328 + 192460366 ACAGCACCATCC-----TTTT-TTT-----TAAAGATTTTTGT--TTCTTTATAAAAGTGGCACAGCTCCGTTT-TAGTGATAGGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCC-GTTAAATACATGTTATAAATGTAACAAATGTTTTCTAATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTTG-GAAATTTGCTGA----------CTGAAAGGCTGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGGTCAGGACACTG--CCCTGAGTTTC-CCTGCAAAAAGCTGGAACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102925 330 - 187378091 ACAgcaccatccttttttttt-ttt-----taaagatttttgt--ttctttataaaagtGGCACAGCTCCGTTT-TAGCGATACGGAAGAAGATACGGGCCTTTAATAGCAAAACCAGCCGATGCCAGTTAAATACATGTTATAAATGTAACAAATGTTTTCTAATGCAGAGGCgagatgagaagaaagaaagggaaacacTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTC----AATGCCCTTG-GAAATTTGCTGA----------CTGAAAGcctgaa-------------aaaggaaaggaagcaagagCTTCGGTCAGGACACTG--CCCTGAGTTTC-CCTGCAAAAAGCTGGAACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 455975 330 - 91754291 ACAGCACCATCC-----TTTTATTT-----TAAAGATTTTTGT--TTCTTTATAAAAGTGGCACAGCTCCATTT-TAGCGATATGGAAGAAGACACGGGCCTTTAATAGCAAAACCAGCCGATGCCAGTTAAATACATGTTATAAATGTAACGAATGTTTTCTAATGCAGAGGCGAGATGAGAAGAAAGAAAGGGAAACACTCAAGAGTGAAGAAGTTAACAACTAAGATGGTGAGTCAATGAATGCCCTTG-GAAACTTGCTGA----------CTGAAAGGCTGAA-------------AAAGGAAAGGAAGCAAGAGCTTCGGTCAGGACACTG--CCCTGAGTTTC-CCTGCAAAAAGCTGGAACC i chlSab2.chr15 I 3 C 0 s canFam3.chr33 29095274 325 + 31377067 ATAGCATAGTCC-----ACTT-TTT--AAGTAAATATTTTTGT--TTGTTTAT--AAGTGATACAACTCCATTTCTAGCAATATGGCAGAAGAGATAAGCCTTTAATCACAAAACCTGCAAATGCCAGAT--------------AATGT---------------GTGCAGAGTTGAGACCAGAAGAAAGGAAGGGAAACAATCAGGGGCGAGGGAGCTGAAACCTGAGCTGGTAAGTC----AGGACTCTTGCGGGATCTGCAGACCTTTGAGATCTAGAGTGTTGAGTGTTAAGGGCTCCATGGAAAAGGAGACACATTCTTAGATTAGGACACTGTAAATTGAATATCTTCTGCATCAATCTGTCACC i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=291534.000000 s hg38.chr3_KI270935v1_alt 165523 232 + 197351 GCCAGCAAAAAAGGTGGACTAGAAAGACCAGGAAGAAAAAAGAAaaaggaagcagaatgaaggatatagt----aacagaccagaactcactatagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----acaaacacctggca--------------agagaaagaaagt------ggggggggggtgggaggagggagagagagagacag-aaaagacacagatatcaagattatt s panTro4.chr3 199802497 229 + 202329955 GCCAGCAAAAAACGTGGACTagaaagaccaggaagaaaaaagaaaaaggaagcagaatgaaggatatagt----aacagaccagaactcactatagaaacaattaaaaatggaataaatgaagccaaagattagttctttgaaaataaa----gcaaacatctggca--------------agagaaagaaagt---------gggggggtgggaggagggagagagagagacag-aaaagacacagatatcaagattatt i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 75017 227 + 111706 GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAAGAAAAAAGAAaaaggaagtaaaacgaaggatatggt----aacagatcagaactcgctatagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgataataaaacagacaaacacctggca--------------agagaaagcgaga---------gagtg---gggaggagggag--agagacacgg-aagagacacagataccaagatcatt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 107787 216 + 192460366 GCCAGC-AAAACGGTGGACTGGAAAGACCAGGAAGAAAAAAGAAaaaggaagtaaaacgaaggatatggt----aacagatcagaactcgctatagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgaaaataaaacagacaaacacctggca--------------agagaaagcgaga---------gagtg---gggaggagggag--------------agagacacagataccaagatcatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 103255 227 - 187378091 GCCAGC-AAAACGGTGGACTGGAAAgaccaggaagaaaaaagaaaaaggaagtaaaatgaaGGATATGGT----AACAGATCAGAACTCGCTatagaaacaattaaaaatggaatcaaTGAAGCCAAAGGTTAGTTCTTcgaaaataaaacagacaaacacctggca--------------agagaaagagaga---------gagtg---gggaggagggag--agagacacag-aagagacacagaTATCAAGATCGTT i papAnu2.chr2 C 0 I 311 s chlSab2.chr15 456305 227 - 91754291 GCCAGC-AAAATGGTGGACTAGAAAGACCAGGAAGAAAAAAGAAaaaggaagtaaaacgaaggatatggt----aacagatcggaactcgctatagaaacaattaaaaatggaatcaatgaagccaaaggttagttcttcgaaaataaaacagacaaacacctggca--------------agagaaagagaga---------gagtg---gggaggagggag--agagacacag-aagagacacagatatcaagatcatt i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29095599 245 + 31377067 CTTAGA-GAAAAGGTGAACCA-AAAAATCAGAAAGAAGAAAGGAaaagaaagcttaatgaaggatataattaagaaaaggacataattaa--gcagaaagaatttaaaatagaatca---aagccaaaagttgattttttgaagatatgctagacaaacttttggcaaggtgaattaagGCAGagaaagaaagaagaaaaagaaagaa---agaaagaaagaa--agaaagaaagaaagaaagaaagaaagaaagaa---- i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=59220.000000 s hg38.chr3_KI270935v1_alt 165755 43 + 197351 agaaacaaaaaagggtacataacttcag-aaaaaaaat-ttaaga s panTro4.chr3 199802726 44 + 202329955 agaaacaaaaaagggtacataacttcagaaaaaaaaat-ttaaga i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 75244 42 + 111706 agaaacaaaaaagggtacataacttcag--aaaaaaat-tcaaga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 108003 42 + 192460366 agaaacaaaaaagggtacataacttcag--aaaaaaat-tcaaga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 103793 42 - 187378091 agaaacaaaaaagggtacataacttcag--aaaaaaat-ttaaga i papAnu2.chr2 I 311 C 0 s chlSab2.chr15 456532 42 - 91754291 agaaacaaaaaagggtacataacttcag--aaaaaaat-ttaaga i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29095844 43 + 31377067 agaaagaaagaaagaaagaaaacagaaa--ggaagaaTATTAAGa i canFam3.chr33 C 0 I 5911 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=413574.000000 s hg38.chr3_KI270935v1_alt 165798 399 + 197351 gacagtgctctgatgaatttataccaaaaagtatgaaaacttagataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa-----cctggctaaaaactattttattttatttatttaattttatttatttatttttttgaaacagagtcttgctttgttgcccaggctggagtgcaatggcatgatctcagctcactgca------------------------------------------------------------acctctgcctcccaggttcaagattctcctgcttcagcctcccaagtagctgggatt---------------------------------------------------------acaggcgcatgccaccacgcccggctaatttttgtatttttagtagagactgggtttcaccatgtcgtcctggctggtctcaaactcctgacctcaggtgatctacccacctcggcatcccaa s panTro4.chr3 199802770 399 + 202329955 gacagtgctctgatgaatttataccaaaaaatatgaaaac--agataaattggatatactgtccttaaaaatataatttatcaaaaatgaattaagaaaaaaa---agCCTGGCTATAAACTATTTTATtttatttatttaattttatttatttatttttttgaaacagagtcttgctttgttgcccaggctggagtgcagtggcatgatctcagctcactgca------------------------------------------------------------acctctgcctcccaggttcaagattctcctgcttcagcctcccaagtagctgggatt---------------------------------------------------------acaggcgcccgccaccacgcccggctaatttttgtatttttagtagagactgggtttcaccatgtcgtcctggctggtctcaaactcctgacctcaggtgatctacccacctcggcatcccaa i panTro4.chr3 C 0 M 527 s rheMac3.chrUn_JH291127 75286 403 + 111706 gacagtgctctgatgaatctataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaagaaaacctggctataaactatcttatttatttaattttgttttatttatttatttttttgagacagggtcttgctttgtcacccaggctg-------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn---------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------tttgtatttttagtagagactgggtttcaccatgtcgtcctggctggtctcaaactcctgacctcagctaatccacccacctcggcatcccaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 108045 404 + 192460366 gacagtgctctgatgaatctataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaagaaaacctggctataaactatcttatttatttaattttgttttatttatttatttttttgagacagagtcttgctttgtcacccaggctggagtgcagtggcatgatctcggctcactgca------------------------------------------------------------atctctacctcccaggttcaagattctcctgcctcaacctcccaagtagctgcgatt---------------------------------------------------------acaggcgcctgccaccacgcctggctaatttttgtatttttagtagagactgggtttcaccatgtcgtcctggctggtctcaaactcctgacctcagctaatccacccacctcggcatcccaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 103835 403 - 187378091 gccAGTGCTCTGATGAATTTAtaccaaaaaatatgaaaacgtAGATAAATTGGATATAGTGTCCTTAAAAATATAGCTTAtcaaaaatgaattaagaaaaaaagaaaacctggctataaactatcttatttatttaattttgtgttatttatttatttttttgagacagagtcttgctttgtcacccaggctggagtgcagtggcgtgatctcggctcactgca------------------------------------------------------------atctctgcctcccaggttcaagattctcctgcctcagcctcccaagtagctgcgatt---------------------------------------------------------acaggcgcgtgccaccgcgcctggctaatttttg-atttttagtagagactgggtttcaccatgtcgtcttggctggtctcaaactcctgacctcagctaatccacccacctcggcatcccaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 456574 403 - 91754291 gacagtgccctgatgaatttataccaaaaaatatgaaaacgtagataaattggatatagtgtccttaaaaatataacttatcaaaaatgaattaagaaaaaaagaaaacctgGCTATAAACTA-CTTATTTATTTAAttttgttttatttatttatttttttgagacagagtcttgctttgtcacccaggctggagtgcagtggcatgatctcggctcactgca------------------------------------------------------------atctccacctcccaggttcaagattttccggcctcagcctcccaagtagctgcgatt---------------------------------------------------------acaggcgcccgccaccacgcctggctaatttttgtatttttagtagagattgggattcaccatgtcatcctgactggtctcaaactcctgacctcagctaatccacccacctcggcatcccaa i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=228603.000000 s hg38.chr3_KI270935v1_alt 166197 264 + 197351 agtgctgggattacaggcatgagccacctcgccctgccactataaactattttaaattgaatcagcagtttaaaaaatataatctaggccgggtgcggtggctcacgcctgtaatcctaacacgttgggagggtgaggcaggcggatcatgaggtcaggagattgagaccatcctggctaacacggtg--aaaaaaaaattagctgggcatggtggcaggcgcctgtagtcccagctactctggaggctgaggcaggagaacggcg s rheMac3.chrUn_JH291127 75689 265 + 111706 agtgctgggattacaggcatgagccacctcgaccggtcgctataaactattttaaattgaatcaacagtttaaaaaatataatctaggctaggcgaggtggctcacgcctgtaatcccagcactttgggaggccgaggctggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtg-aaaaaaaaaattagccgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 108449 266 + 192460366 agtgctgggattacaggcatgagccacctcgaccggtcgctataaactattttaaattgaatcaacagtttaaaaaatacaatctaggccgggcgaggtggctcatgcctgtaatcccagcactttgggaggccgaggctggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaaaaaaaaattagccaggcatggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104238 265 - 187378091 agtgctgggattacaggcatgagccacctcgacCGGTCgctataaactattttaaattgaatcaacagtttaaaaaatataatctaggctaggcgaggtggctcacgcctgtaatcccagcactttgggaggccgaggctggcggatcacaaggttaggagatcgagaccatcctggctaacacggtg-aaaaaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 456977 266 - 91754291 agtgctgggattacaggcatgagccaccTTCACCGGTCGCTATAAACTATTTTAAATTGAATCAACAGTTTAAAAAATATAATCTAggctgggcgaggtggctcacgcctgtaatcccagcactttgggaggccaaggctggcagatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaaaaaaaaattagccgggcatggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcg i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120918366 3742 + 123690457 I e panTro4.chr3 199803169 527 + 202329955 M a score=1651295.000000 s hg38.chr3_KI270935v1_alt 166461 1322 + 197351 tgaacctgggaggcagaggttgcagtgagcggagatcatgccattgcactccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaatatgtatatataatctatccaccccacaaaaaaatgcaggctaagatgagtttacaggcaaatcagacattcaaggaacaggtaatttcaattctatacaaacatattcagagtttggaacaggaggaaatgatctactaataattttataaggttggaaaccaaagataggataagaaagacaaactatagattaataagtcccagtaataatacatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcacgcctgtaaccccaacactttggca-ggccgaggcaggcggatcacttgaggccgggagttccagaccagcctggccaacctagagaaaccccgtctctggtaaaaatac--aaaaaatttgta--tttttttggattacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacgagaattgcttgaacccaggaggcagagattgcagtgagccgagattgtgccactgcactccagcct-ggtgacagagcaggactctatc--------------------ttaaataaataaataaataaataaataaataaatattttaaaagtacatcatgatcaagctgagtttaaatcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggaggggagacacaatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgttaaaactcctagcaaactaaaaagagacgttaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatacttaaaacaatagaaacgtttctgtaaaatcaggaataaaaacaagatgccaacaatcactgcttctaatcaacattaggttgaaggttttagctggtgaaataagacgagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatggaagggatgaaacaagcctatggttatttgcagataacataattgtttacatagaaacttcccaaacatatacattattagcaaagttctatatccataatcaaaattttaaaaataattgcattccagctgggtgtggtgattcatgcctg-aatcccagtgctttgagaggctgaggcaggaggaacacttgaggccaggagttcaagaccagcctgggtaaca s panTro4.chr3 199803696 1310 + 202329955 tgaacctgggaggcagaggttgcagtgagcggagatcatgccattgcactccagcctgggtgacaaggtgagactccgtctcaaaaaa-aaa-aTGTATATATAATCTATCCACCCCACAAAAAAATGCAGGCTAAGATGAGTTTACAGGCAAATcagacattcaaggaataggtaatttcaattctatacaaacgtattcagagtttggaacagaaggaaatgatctactaataattttataaggttggaaaccaaagataggataagaaagacaaactatagattaataagtcccagtaataatagatggaagcatcgtaaataaaatattagcaagcc---------------aaagtgcatcatggccgggcgcggcggctcacacctgtaaccccaacactttggca-ggccgaggcgggcggatcacttgaggctgggagttccagaccagcctggccaacctagagaaaccccgtctctggtaaaaatac--aaaaaatttgta--tttttttggattacaggtgtgtgctgggcttggtggcacacacctgtaatcccagctactcaggaggctgaggcacgagaattgcttgaacccaggaggcagagattgcagtgagccaagattttgccactgcactccagcct-ggagacagagcaggactctatc--------------------ttaaataaataaataaataaata------------ttttaaaagtacatcatgatcaagctgagtttaaatcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatgtaaacagaatggaggggagacacaatcacc---acagcagatacaggaaagttatttgataaaagtcaacacttactcctgttaaaactcctagcaaactaaaaagagacgttaactcttttaacctgataaacaatgtcaattataaccccgtgtaaacattatacttaaaacaatggaaacgtttctgtaaaatcaggaataaaaccaagatgccaacaatcactgcttctaatcaacattaggttgaaggttttagctggtgaaataagacgagaaaattaaacaaaaagtatgagagtacagaaatgtgattttgggtatgggagggatgaaacaagcctatggttatttgcagataacctaattgtttacatagaaaattcccaaacatatacattattagcaaagttctacatccataatcaaaatttttaaaataattgcattccagctgggcatggtgattcatgcctgcaatcccagggcttcgagaggctgaggcaggaggaacacttgaggccaggagttcaagaccagcctgcgcaaca i panTro4.chr3 M 527 C 0 s rheMac3.chrUn_JH291127 75954 1315 + 111706 tgaacctgggaggcagaggttgcagtgtgccaagatcgcgccattgcactccagtctgggtgacgaggcaagactccgtctcaaaaaa-aaatatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggccgaacgcagtcgctcacacctgcaaccccaacac--tggcagggccgaagcgggtggatcacttggagccaggagttccagaccagcctggccaacctagagaaaccctgtctctggtaaaaatac-aaaaaaaattgtatttttttttggattacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc--------------------atatataaataaataaataagaa------------ttttaaaagtacatcacgatcaagctgagtttaaatcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggaggggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgttaaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatacttaaaacactggaaacgtttccgtaaaatcaggaatgaaaccaagatgccaacaatcaccgcttctaatcaacattcggttgaaggttttagctggtgaaataagacgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtttacatagaaacttcccaaatatataaattattagcaaagttttacatccataatcaaaattttaaaaataattgcattccAgctgggtgtggtggttcatgcctgtaatcccagtgctttgagaggctgaggcaggaggaacacttgaggccaggcattcgagaccagcctgggcaaca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 108715 1316 + 192460366 tgaacctgggaggcagaggttgcagtgagccgagatcgtgccattgcactccagtctgggtgacaaggcgagactccgtctcaaaaaatatatatgtatatataatctatccaccccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaagaggtaatttcaattctatacaaacttattcagagtttagaacgggaggaaatgatctgttactaattttataaggttggaaaccagagct-ggataagaaagacaaactacagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcatggctggacgcggtcgctcatgcctgtaaccccaacac--tggca-ggtcgaagcgggtggatcacttggggccaggagttccaaaccagcctggccaacctagagaaaccctgtctctggtaaaaatacaaaaaaaaattgtatttttttttggattacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcaggaggctgaggcacgagaatggcttgaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc--------------------ataaataaataaataaataagaa------------ttttaaaagtacatcatgatcaagctgagtttaaatcagaaatgcaagataaagacaatgctttcttaatgtaactcaccatataaacagaatggaggggaaacacaatcacc---gcagcagatacaggaaaattatttgataaaagtcagcacttattcccgttaaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatacttaaaacactggaaacgtttccgtaaaatcaggaatgaaaccaagatgccaacaatcactgcttctaatcaacattcagttgaaggttttagctggtgaaataagatgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtttacatagaaacttcccaaatatataaattattagcaaagttttacatccataatcaaaattttaaaaataattgcattccagctgggtgtggtggttcatgcctgtaatcccagtgctttgagaggctgaggcaggaggaacacttgaggccaggcattcgagaccagcctgggcaaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104503 1317 - 187378091 tgaacctgggaggcagaggttgcagtgagccgagatcgtgccattgcactccagtctgggtgacaaggcgagactctgtctcaaaaaaaatatatgtatatataatctatCCACCCCACaaaaaaaTGTAGGCTAAGATGAGTTTACAGGCAAATCAGACATTCAAGGAATAGGTAATTTCAATTCTATACAAACTTATTCAGAGTTTAGAACAGGAGGAAATGATCTGCTACTAATTTTATAAGGTTGGAAACCAGAGCT-GGATAAGAAAGACAAACTACAGAT-------------TAATAATAGATGGAAgcatcataaataaaatattaacaagtcaaagtagaattttaaaaagtgcatcaTGGCCAAACGCGGTCGCTCACGCCTGCAACCCCAACAC--TGGCagggccgaagcgggtggatcacttggagccaggagttccagaccagcctggccaacctagagaaaccctgtctctggtaaaaatacaaaaaaaaattgtatttttttttggattacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcatgagaattgcttgaacccaggaggcggaagttgtagtgagctgagattgtgccactgcagtccagcctgggtgacagagcaggactctatc--------------------ataaataaataaataaataacaa------------ttttaaaagtacatcaTGATCAAGCTGAGTTTAAATCAGAAATGCAAGATAAAGACAATGCTTTCTTAATGTAAatcaccatataaacagaatggAGGGGAAACACAATCACC---GCAGCAGATACaggaaaattatttgataaaagtCAGCACTTATTCCCGTTAAAACTCCAGGCAAACTAAAAGGAGACATTAACTCTCTTAACCTGATAAACAATGTCAATTATAACGCTATGTAAACATTATACTTAAAACACTGGAAACGTTTCcgtaaaatcaggaataaaaccAAGATGCCAACAATCACTGCTTCTAATCAACATTCGGTTGAAGGTTTTAGCTGGTGAaataagatgagaaaaataaacaaaaggcatGAAAGTACACAAAAGTTATTTTGGGTAtggaagggatgaaataagccaatggttatttgcagataacataattGTTTACATAGAAACTTCCCAAACATATAAATTATTAGCAAAGTTTTACATccataatcaaaattttaaaaataattgcattcccgctgggtgtggtggttcatgcctgtaatcccagtgctttgagaggctgaggcaggaggaacacttgaggccgggcattcgagaccagcctgggcaaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 457243 1338 - 91754291 tgaacctgggaggcagaggttgcagtgtgccaagatcacgccattgcactccagtctgggtgacaaggcgagactccgtctcaaaaaaaaTATATGTATATATAATCTATCCACCccacaaaaaaatgtaggctaagatgagtttacaggcaaatcagacattcaaggaataggtaatttcaattctatacaaacttattcagagtttagaacaggaggaaatgatctgctactaattttgtaaggttggaaaccagagct-ggataagaaagacaaactagagat-------------taataatagatggaagcatcataaataaaatattaacaagtcaaagcagaattttaaaaagtgcatcatggccggacacggtcgcttacgcctgtaaccccaacac--tggcagggccgaagcgggtggatcacttggggccaggagttccaaaccagcctggccaacctagagaaaccctgtctctggtaaaaatac-caaaaaaattgta-ttttttttggattacagctgtgtgctgggcttggtggcatacacctgtaatcccagctactcgggaggctgaggcacgagaattgctggaacccaggaggcggaggttgtagtgagctgagattgtgccactgcagtcccgcctgggtgacagagcaggactctgtcataaataaataaataaataaataaataaataaataaataaGAA------------ttttaaaagtacatcatgatcaagctgagtttaaatcagaaatgcaagataaagacaatgctttcttaatgtaaatcaccatataaacagaatggaggggaaacacaatcaccacagcagcagatacaggaaaagtattcgataaaagtcagcacttattcccgttaaaactccaggcaaactaaaaggagacgttaactctcttaacctgataaacaatgtcaattataaccctatgtaaacattatacttaaaacactggaaacgtttccgtaaaatcaggaataaaaccaagatgccaacaatcactgcttctaatcaacattcggttgaaggttttagctggtgaaataagacgagaaaaataaacaaaaggtatgagagtacacaaaagttattttgggtatggaagggatgaaataagccaatggttatttgcagataacataattgtttacatagaaacttcccaaacatataaattattagcaaagttttacatccataatcaaaatttttaaaataattgcattccagctgggtgtggtggttcatgcctgtaatcccagtgctttgagaggctgagacaggaggaacacttgaggccgggcattcgagaccaacctgggcaaca i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120918366 3742 + 123690457 I a score=225165.000000 s hg38.chr3_KI270935v1_alt 167783 177 + 197351 tagcaagatcctgtctctacagaaataaaaaataaaaaaataa---aaaattagctgggcatagtagcacacacatatagttccagctactc-agaagttgaggggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcaccccactgtactccagcctgcatgac s panTro4.chr3 199805006 177 + 202329955 tagcaagatcctgtctctacagaaataaaaaataaaaaaataa---aaaattagctgggcatagtagcacacacatatagttccagctactc-agaagttgaggggggaggatcacttgagcccaagagttcgaggctgcagtgagctatgatcaccccactgtactccagcctgcatgac i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922108 147 + 123690457 tagcaaagttctacatccat---aatcaaaattttaaaaataattgcattccAgctgggcatggtggttcatgcctgtaatcccagtgctttgagaggctgaggcaggaggaacacttgaggccaggagttcgaga-------------------------------ccagcctgggcaac i nomLeu3.chr11 I 3742 C 0 s rheMac3.chrUn_JH291127 77269 167 + 111706 tagcaagatcctgtctctacagaaataaaaacgaaaaa-------------tagctgggcccggtagcacacacatagagttccagcgactc-agaggttgatggggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgac i rheMac3.chrUn_JH291127 C 0 I 137 s macFas5.chr2 110031 167 + 192460366 tagcaagatcctgtctctacagaaataaaaacgaaaaa-------------tagttgggcctggtagcacacacatagagttccagcgactc-agaggttgatggggaaggatcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 105820 167 - 187378091 tagcaagatcctgtctctacagaaataaaaacgaAAAA-------------TAGCTGGGCCCGGTAGCACACACATAGAGTTCCAGCGACTC-AGAGGTTGATgaggaaggatcacttcagcccaagagttcaaggcttcagtgagctacgatcgccccactgcactccagcctgcatgac i papAnu2.chr2 C 0 I 3 s chlSab2.chr15 458581 167 - 91754291 tagcaagatcctgtctctacagaaataaaaacaaaaaa-------------tagctgggcccagtagcacacacatagagttccagcgactc-agaggttgatggggaaggagcacttcagcccaagagttcaaggctgcagtgagctacgatcgccccactgcactccagcctgcatgac i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=553219.000000 s hg38.chr3_KI270935v1_alt 167960 321 + 197351 agagggagactctgtctc------aaaaagagatttaaaaacaaaa-----------taaaactgcattcctatatatcagtgaaagagaaaatatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaaacacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCttccttccaggatgtttttatgctttaaaaaatatatagttt s panTro4.chr3 199805183 321 + 202329955 agagggagactctgtctc------aaaaaaagatttaaaaacaaaa-----------taaaactgcattcctatatatcagtgaaagagaaaatatttttaagactatagtgtttatgatggtgacc-aaaaaaagtacataaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaaacacacataCTGGTTACGTGCATTTGGGAACATT--TATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCttccttccaggatgtttttatgctttaaaaaatatatagttt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922255 340 + 123690457 atagcaagatcctgtctctacagaaataaaaaataaaaaaataaaAAATTAGCTGGGCATGGTAgcactcctatatatcagtgaaacagaaaatatttttaagactatagtgtttatgatagtgacc-aaaaaaagtacgtaaaaataaatctaacaaaagatgtgcttaatctttatggacaaaattgtacaactgcattgaaatatgccaaagaaaacacacataCTGGTTACGTGCATTTGGGAACATTGAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGACAATGCttccttccaggatgtttttatgctttaaaaaatatacagttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77573 326 + 111706 agagggagactctgcctc------aaaacaagattaaaaaaccaaaaaa---------aaaaCtgcattcctatatatcagtgaaagagaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatacgccaaagaaaacacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACTAGATAACGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i rheMac3.chrUn_JH291127 I 137 I 8 s macFas5.chr2 110198 329 + 192460366 agagggagactctgcctc------aaaacaagattaaaaaacaaaaaaaaa------caaaactgcattcctatatatcagtgaaagagaaaatatttttaattctatagtgtttatgatggtgaccaaaaaaaagtacataaaaataaatctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaaacacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACCAGATAACGCTTCCTTCTAGGATTTTTTTATGCTTTAAAAAATATATAGTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 105990 323 - 187378091 agagggagactctgcctc------aaaacaagattaaaaaacaaaa------------aaaactgcattCCTATATatcagtgaaagagaaaatatttttaagactatAGTGTTTATGATGGTGaccaaaaaaaagtacataaaaataaatctaacaaaaaacGTGCTTAATCTTTGTGGACAAAATTGTACAACTGCATTGAAATATGCCAAAGAAAACACACATACTAGTTACGTGCATTTGGGAATATTTAGATAGTTGAAAGATCAAAACCCATAATCTTGCTACTAGATAAGGCttccttctaggatttttttatgctttaaaaaatatatagttt i papAnu2.chr2 I 3 C 0 s chlSab2.chr15 458748 323 - 91754291 agagggagactctgcctc------aaaacaagattaaaaaacaaaa------------aaaactgcattcctatatatcagtgaaagagaaaatatttttaagactatagtgtttatgatggtgaccaaaaaaaagtacataaaaataagtctaacaaaaaacgtgcttaatctttgtggacaaaattgtacaactgcattgaaatatgccaaagaaaacacacataCTAGTTACGTGCATTTGGGAACATTTAGATAGTTGAAAGATCAAAACCCATAATCTTTTTGCTAGATAAGGCTTCCTTCTAGGATTTTTTTATGCTTTAaaaaatatatagttt i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2919.000000 s hg38.chr3_KI270935v1_alt 168281 4 + 197351 aggc s panTro4.chr3 199805504 4 + 202329955 aggc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922595 4 + 123690457 aggc i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110527 4 + 192460366 TAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 106313 4 - 187378091 tagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 459071 3 - 91754291 -ggc i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 77899 8 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2331.000000 s hg38.chr3_KI270935v1_alt 168285 4 + 197351 cagg s panTro4.chr3 199805508 4 + 202329955 cagg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922599 4 + 123690457 cggg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110531 4 + 192460366 CAGT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 459074 4 - 91754291 cggg i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 77899 8 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e papAnu2.chr2 106317 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=23669.000000 s hg38.chr3_KI270935v1_alt 168289 45 + 197351 cgtggtggctcacacctgtaatcccagcgctttgtgaggctgagg s panTro4.chr3 199805512 45 + 202329955 cgcggtggctcacacctgtaatcccagcgctttgtgaggctgagg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922603 45 + 123690457 cgtggtggctcacacctgtaatcccagcactttgtgaggctgagg i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 459078 45 - 91754291 cgcggtggctcacgcctgtaatcccagcactttgggaggccgagg i chlSab2.chr15 C 0 I 166 e rheMac3.chrUn_JH291127 77899 8 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e macFas5.chr2 110535 0 + 192460366 C e papAnu2.chr2 106317 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=26017.000000 s hg38.chr3_KI270935v1_alt 168334 98 + 197351 tgggcggatcatgaggtcaggagatcgagaccatcctggctaacagggtgaacccccgtctctactaaaaatacaaaaaaattagccgggcgtggtgg s panTro4.chr3 199805557 98 + 202329955 tgggcggatcatgaggtcaggagatcgagaccatcctggctaacacggtgaacccccgtctctactaaaaatacaaaaaaattagccgggcgtggtgg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922648 98 + 123690457 tgcgcggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaaattagccgggcatggtgg i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 77899 8 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 459123 166 - 91754291 I e macFas5.chr2 110535 0 + 192460366 C e papAnu2.chr2 106317 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1758.000000 s hg38.chr3_KI270935v1_alt 168432 4 + 197351 cggg s panTro4.chr3 199805655 4 + 202329955 cggg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922746 4 + 123690457 cggg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 106317 4 - 187378091 cggt i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 77899 8 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 459123 166 - 91754291 I e macFas5.chr2 110535 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=164366.000000 s hg38.chr3_KI270935v1_alt 168436 135 + 197351 cgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagattgcaccactgcactcctgcctgggtgacagagtgagactccgtctcaaaaaaa s panTro4.chr3 199805659 135 + 202329955 tgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttgcagtgagccgagattgcaccactgcactcccgcctgggcgacagagtgagactctgtctcaaaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922750 133 + 123690457 tgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccaagatcgcaccactgcactccagcctgggtgac--agtgagactccgtctccaaaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77907 133 + 111706 cgcctgtggtcccagcgactcgggaggctgaggcaggagaacggcgtgaactcagaaggcggagcttgcagtgagcc-agatcgcgccactacactccag-ctgggtgacagagtgagactccgtctcaaaaaaa i rheMac3.chrUn_JH291127 I 8 I 37 s macFas5.chr2 110535 133 + 192460366 cgcctgtggtcccagcgactcgggaggctgaggcaggagaacggcgtgaactcggaaggcggagcttgcagtgagcc-agatcgcgccactgcactccag-ctgggtgacagagtgagactccgtctcaaaaaaa i macFas5.chr2 C 0 I 2 s papAnu2.chr2 106321 133 - 187378091 cgcctgtggtcccagcgactcgggaggctgaggcaggagaacggtgtgaactcggaaggcggagcttgcagtgagcc-agatcgcgccactgcactccag-ctgggtgacagagtgagactccgtctcaaaaaaa i papAnu2.chr2 C 0 I 2 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 459123 166 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=4838.000000 s hg38.chr3_KI270935v1_alt 168571 18 + 197351 aaa------ttaaaaattaaaaaa s panTro4.chr3 199805794 24 + 202329955 aaaaaaaaattaaaaattaaaaaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922883 19 + 123690457 aaa-----attaaaaattaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 110670 18 + 192460366 ------aaaataaaaacagaaaca i macFas5.chr2 I 2 I 19 s papAnu2.chr2 106456 18 - 187378091 ------aaaacaaaaccagaaaca i papAnu2.chr2 I 2 I 71 e rheMac3.chrUn_JH291127 78040 37 + 111706 I e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e chlSab2.chr15 459123 166 - 91754291 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=882617.000000 s hg38.chr3_KI270935v1_alt 168589 521 + 197351 tatatatgtatagtttaacttattcagtatacataattttgtatcctgcctttttagccatacctgatatgagcatttcttcaagatactagcttcgtaaacatAGCCTGAGAAGACGCACATCTTTTATGTCTTGGATGGCAGTTCCTTGCTTCCCCCTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGGGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCCTCCTTCCTAACAAAGCCACTCCCCCAACTGGAAGCGTTGTTACCCTTCCCATTTTCTGTTAAACAGGAGCAGGTCTCTCTCCTGTACCACATCCTGCTGTGTGTCCACCATACCCACCTCTCTGTGCAATGAGAGCTCGGGGGTCATGTGGACTCCACTGCTCCCTGCTCGCAATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtg-----------tgtgtgtgtgtgtg----tg s panTro4.chr3 199805818 525 + 202329955 tatatacgtatagtttaacttattctgtatacataattttgtatcctgcctttttagccatacctgatatgagcatttcttcaagatactagcttcataaacatAGCCTGAGAAGACGCACATCTTTTATGTCTTGGATGGCAGTTCCTTGCTTCCCCCTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGGACTGGGAGAGCTCAGCTCCATAGTAAAATCTAGGGTGCTGTATAAAAACTCCCCCTGCTGAGCTCTGGTGGCCTCCTTCCTAACAAAGCCACTCCCCCAACTGGAAGGGTTGTTACCCTTCCCATTTTCTGTTAAACAGGAGCAGGTCTCTCTCCTGTACCACATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGCAATGAGAGCTCGGGGGTCATGTGGACTCCACTGCTCCCTGCTCACAATTTCTCCTTAATACATCTTACTTTATGCCCGTTC--------TGTGTGTTGCTAGTATGTATGTGTGACACtgtg-----------tgtgtgtgtgtgtgacactg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120922902 504 + 123690457 -atacatatatagtgtaacttattcagtatacgtaattttatatcctgcctttttagccatacctgatatgagcatttcttcaagatactagcttcataaacatAGCCTGAGAAGAGGCACATCTTTTATGTCTTGGATGGCAGTTCCTTGCTTCCCTCTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGGACTGGGAGTGCTCAGCTCCACAGTAAAATCTAGGGTGCTGTATAAAAACT--CCCTGCTGAGCTCTGGTGGCCTCCTTCCTAACAAAGCCACTCCCCCAACTGGAAGCATTGTTACCCTTCCCATTTTCCGTTAAACAGGAGCAGGTCTCTCTCCTGGACCATATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGTGATGAGAGCTTGGGGGTCATGTGGACTCCACTGCTCCCTGCTCGCAATTTCTCCTTAATATGTCTTACTTTATGCCCATTC----------TGTGTTGCTAGTATGTATGTGCGACACtgtg-----------tgtg---------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 78077 523 + 111706 TATATATATATAGTTTAACTTATTCAGTATACATAATTTTGTGTCCTGCCTTTTTAGCCATACCTGATATGAGCATTTCTTCAAGATACTAGCTTTGTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTCGGATGGCAGTTCCTTGCTTCCCCGTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGG-CTGGGAGAGCTCCGCTCCGCAGGAAAATCTAGGGTGCTGTATAAAACTC--CCCCGCTGAGCTCTGGTGGCTTCCTTCCTAACAAAGCCACTTCCCC-ACTGGAAGCGCTGTTACCATTCCCATTTCCCCTTCAACAGGCGCAGGTCTCTCTCCTGGACCACATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGCGATGAGAGCTCAGAGGCCACGTGGACTCCACCGCCTCCTGCTCGCAATGTCTCCTTAACACATCTTACTTTATGCCCGTTCtgtgtgtttgtgtgttgct--tatgtatgtgtgacactgtg-----------tgtgtgtgtgtgtc----tg i rheMac3.chrUn_JH291127 I 37 C 0 s macFas5.chr2 110707 523 + 192460366 TATATATATATAGTTTAACTTATTCAGTATACATAATTTTGTGTCCTGCCTTTTTAGCCATACCTGATATGAGCATTTCTTCAAGATACTAGCTTTGTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTCGGATGGCAGTTCCTTGCTTCCCCGTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGG-CTGGGAGAGCTCCGCTCCGCAGGAAAATCTAGGGTGCTGTGTAAAACTC--CCCCGCTGAGCTCTGGTGGCTTCCTTCCTAACAAAGCCACTTCCCC-ACTGGAAGCGCTGTTACCATTCCCATTTCCCCTTCAACAGGCGCAGGTCTCTCTCCTGGACCACATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGCGATGAGAGCTCAGAGGCCACGTGGACTCCACCGCCTCCTGCTCGCAATGTCTCCTTAACACATCTTACTTTATGCCCGTTCTTTGTGTTTGTGTGTTGCT--TATGTATGTGTGACACtgtg-----------tgtgtgtgtgtgtc----tg i macFas5.chr2 I 19 C 0 s papAnu2.chr2 106545 527 - 187378091 tgtgtatatatagtttaaCTTATTCAGTATACATAATTTTGTGTCCTGCCTTTTTAGCCGTACCTGATATGAGCATTTCTTCAAGATACTAGCTTTGTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTCGGATGGCAGTTCCTTGCTTCCCCCTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGG-CTGGGAGAGCTCAGCTCCGCAGTAAAATCTAGGGTGCTGTATAAAACTC--CCCCGCTGAGCTCTGGTGGCTTCCTTCCTAACAAAGCCACTTCCCC-ACTGGAAGCGCTGTTACCATTCCCATTTCCCCTTCAACAGGCGCAGGTCTCTCTCCTGGACCACATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGCGATGAGGGCTCAGAGGCCACGTGGACTCCACCGCCTCCTGCTCGCAATGTCTCCTTAACACATCTTACTTTATGCCcgttctgtgtgtttgtgtgttgct--tatgtatgtgtgacactgtg-----------tgtgtgtgtgtgacactgtg i papAnu2.chr2 I 71 I 246 s chlSab2.chr15 459289 527 - 91754291 tatATATATATAGTTTAACTTATTCAGTATACATAATTTTGTGTCCTGCCTTTTTAGCTATACCTGATATGAGCATTTCTTCAAGATACTAGCTTTGTAAACATAGCCCGAGAAGAGGCACATCTTTTATGTCTTGGATCGCAGTTCCTTGCTTCCCCCTTTTGGAGTCCTACAAGAGCTGGCTCAGGGGG-CTGGGAGAGCTCAGCTCCGCAGTAAAATCTAGGGTGCTGTATAAAACTC--CCCTGCTGAGCTCTGGTGGCTTCCTTCCTAACGAAGCCATTTCCCC-ACTGGAAGTGCTGTTACCATTCCCATTTCCCCTTCAACAGGCGCAGGTCTCTCTCCTGGACCACATCCTGCTGTGTGTCCACCGTACCCACCTCTCTGTGCGATGAGA---------CCACGTGGACTCCACCGCTTCCTGCTCGCAACATCTCCTTAACACATCTTCCTTTATGCCCGTTCtgtgtgtttgtgtgttgctagtatgtatgtgtgacactgtgttgtgtgacactgtgtgtgtgtgtc----tg i chlSab2.chr15 I 166 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=22477.000000 s hg38.chr3_KI270935v1_alt 169110 20 + 197351 tgtgtgtgtgACACTGTGTG s panTro4.chr3 199806343 14 + 202329955 tgtgtgtgtg------tgtg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120923406 4 + 123690457 ----------------tgtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 78600 20 + 111706 tgtgtgtgtgacactgtgtg i rheMac3.chrUn_JH291127 C 0 I 704 s macFas5.chr2 111230 20 + 192460366 tgtgtgtgtgacactgtgtg i macFas5.chr2 C 0 I 379 s papAnu2.chr2 107318 20 - 187378091 tgtgtgtgtgacactgtgtg i papAnu2.chr2 I 246 I 16 s chlSab2.chr15 459816 20 - 91754291 tgtgtgtgtgacactgtgtg i chlSab2.chr15 C 0 I 134 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=995578.000000 s hg38.chr3_KI270935v1_alt 169130 559 + 197351 TGTGTGTCCCTGCCCTTATGGAACATTGGACATAGCCTTTAAACAtttttttttccagatggagtttcactcttgttgcccaggctggagtgcaacggcacgatttcggcccactgcaacctccacctccgtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttgtatttttagtggagactgggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatccactcacctcagcctcccaaagtgctgggattacaggcgtgagccaccgcgcccggccTAAACACTAAATAATAAGCCATCATAGAGAAAGCTCATATTGTTAActtactgttggacaattaggatatttccaatgtattgcttattttaaataaagccctgatgactatctttgtgtctaatgttttgtttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgctgttataaaatttttcatgttattaatacag----actg s panTro4.chr3 199806357 559 + 202329955 tgtgtgtCCCTGCCCTTATGGAACATTGGACATAGCCTTTAAACAtttttttttccagatggagtttcactcttgttgcccaggctggagtgcaacggcacgatttcggcccactgcaacctccgcctccgtgattctcctgcttcagcctcccaagtagctgggattacaggcatgtgccaccatgccaggctaattttttgtatttttactggagactgggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatccactcacctcaacctcccaaagtgctgggattacaggcgtgagccaccgcacctggccTAAACACTAAATAATAAGCCATCATAGAGAAAGCTCATATTGTTAActtattgttagacaattagggtatttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtatgatgttttgtttacattatttcagctcatctccttaacataaatttctatcagtggaattgctggtttatgctgttataaaatttttcatgttattaatacag----actg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120923410 558 + 123690457 tgtgtgtCCCTTCCCTTATGGAACACTGGACATAGCCTTTAAACAtttttttttccagatggagtttcgctcttcttgcctaggctggagtgcaacggcatgatttcggcccactgcaacctccgccttggtgattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccacgccaggctaattttttgtatatttagtagagactgggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatccactcaccttggcctcccaaagtgctgggattacaggcgtgagcctccgcgcccagccTAAACActaaataataagccatcatagagaaagctcatattgttaacttactgttggacaatcaggatatttccaatgtattgcttattttaaataaagcgctgatgactatcttcgtg-ataacgttttgtttacattatttcagctcacctccttaacataaatttctatcagtggaattactgattaatgctgttataaaatttttcatgttattaatacag----actg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79324 562 + 111706 tgtgtgtccatgcccttatggaatAGTGGACATAGCCTTTAAACA-ttttttttccagatggagtttcgctcttgttgcccaggctggagtgcaatggcatgatttcggctcactgcaaactccacctccgtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgtgccaccatgccacgctaaatttttgtatttttagtagagactgggtttcaccatgttggccaggctggtctgaaattcttgacctcaggtgatccgctcacctcagcctcccaaagtgctgggagtacaggtgtgagccaccgcacttggccTAAACATTAaataataaatcatcgtagaaaaagctcatattgttaacttactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactaacttcgtgtataatgtttcgtttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgctataaaatttttcatgttattaatacagaaatactg i rheMac3.chrUn_JH291127 I 704 C 0 s macFas5.chr2 111629 562 + 192460366 tgtgtgtcCATGCCCTTATGGAATAGTGGACATAGCCTTTAAACA-ttttttttccagatggagtttcgctcttgttgcccaagctggagtgcaatggcatgatttcggctcactgcaaactccacctccgtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgcgccaccatgccacgctaaatttttgtatttttagtagagactgggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatctgctcacctcagcctcccaaagtgctgggagtacaggtgtgagccaccgcactcggccTAAACATTAaataataaatcatcgtagaaaaagctcatattgttaacttactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgtttcgtttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgctataaaatttttcatgttattaatacagaaatactg i macFas5.chr2 I 379 C 0 s papAnu2.chr2 107354 562 - 187378091 tgtgtgtccatgCCCTTATGGAATAGTGGACATagcctttaaaca-ttttttttccagatggagtttcgctcttgttgcccaggctggagtgcaatgacatgatttcggctcactgcaaactccacctccgtgattctcctgcctcagcctcccaagtagctgagactacaggtacgcgccaccatgccaggctaaatttttgtattttcagtagagactgggtttcaccatgttggccaggctggtctcaaactcttgacctcaggtgatccgctcacctcagcctcccagagtgctgggagtagaggtgtgagccaccgcacccggcctaaacattaaataataaatcatcGTAGAAAAAGCTCATATTGTTAACTTACTGTTGGACATTTAGAATGTTTCCAATGTATTGCTTATCTTAAATAAAGCCCTGATGACTATCTTCGTGTATAATGTTTCGTTTACATTATTTCAGCTCATCTCCTTAACTTAAATTTCTATCACTGGAATTACTGGTTAATGCTGttataaaatttttcatgttattaatacaaaaatactg i papAnu2.chr2 I 16 C 0 s chlSab2.chr15 459970 563 - 91754291 tgtgtgtccattcccttacggaATATTGGACATAGCCTTTAAACAtttttttttccagatggagtttcgctcttgttgcccaggctggagtgcaatgacatgatttcggctcactgcaaactccacctccgtgattctcctgcctcagcctcccaagtagctgagattacaggtgtgtgccaccatgccaggctaaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcttgacctcagatgatccgctcacctcagcctcccaaagtgctgggattacaggtgtgagccaccgcacccgtccTAAACATTAAATAATAAATCATCGTAGAAAAAGCTCATATTGTTAActtactgttggacatttagaatgtttccaatgtattgcttattttaaataaagccctgatgactatcttcgtgtataatgtttcgtttacattatttcagctcatctccttaacttaaatttctatcactggaattactggttaatgctgttataaaatttttcatgttattaatacagaaatactg i chlSab2.chr15 I 134 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 962116 9856 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=377667.000000 s hg38.chr3_KI270935v1_alt 169689 163 + 197351 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagtgtgcctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCACAGCATCGACTGAAAA s panTro4.chr3 199806916 163 + 202329955 ccaaatttctttgcagaaagcttatgccaatttacagacctgttggcagtgtgcaagagcgtgcctgtttccccatatccctagccTGTGAACAAAGGGGCATGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCACAGCATCGACTGAAAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120923968 163 + 123690457 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagcgtgcctgtttccccatatccctggccTGTGAACAAAGGGGCATGATCCAGGACAGGCCTCATCCCTCACCTGCTGCTCTTTGCTTCACAGCATCGACTGAAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79886 162 + 111706 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagcgtgcaagagtgtgcctgtttccccatatccc-ggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCTTCACCTGCTGCTCTTTGCTTCATAGCATTGATTGAAAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 112191 162 + 192460366 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagaatgtgcctgtttccccatatccc-ggccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCTTCACCTGCTGCTCTTTGCTTCATAGCATTGATTGAAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107916 162 - 187378091 CCAAATTTCtttgcagaaagcttctgtcAATTTACAGACCTGTTGGCAGTGTGCAAGagtgtgcctgtttcctcatatCCC-GGCCTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCATAGCATCAATTGAaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 460533 162 - 91754291 ccaaatttctttgcagaaagcttgtgccaatttacagacctgttggcagtgtgcaagagtgtgcctgtttccccatttccc-agccTGTGAACAAAGGGGCACGATCCAGGACAGGCCCCATCCCTCACCTGCTGCTCTTTGCTTCGTAGCATCGATTGAAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73779080 163 + 74750902 ctaaatttcattgcagaaagattgtaccaatgtacagacctgctggcagagtgcaaggccgtgcctgttgccccgtatccccTGTCTGTGCACAAAGGGGCATGATCCAGGACAGGCCCCAGCCCTGCGCTGCTGCTCTTTGCTTTGTAGCACCAACTGAAAA i calJac3.chr17 n 9856 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=520843.000000 s hg38.chr3_KI270935v1_alt 169852 299 + 197351 TCggccaggtgcggtgcctcacacctgtaatcccagcactttgggaggtcgaagcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattacccaggcatggtggcgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgggactccatctcaaa---------aaaaaaaaaaaT--------------- s panTro4.chr3 199807079 299 + 202329955 TCggccaggtgaggtgcctcacacctgtaatcccagcagtttgggaggtcgaagtgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattaaccaggcatggtggtgtgcacctgtaatcccagctactcaggaggctgaggcaggagaatctctcaaacctgggaggtggaggttgcagtgagccgagatcgcgccactgcacttcagcctgggcgacagagcgggactccatctcaaa---------aaaaaaaaaaGT--------------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120924131 302 + 123690457 TCggccgggtgcagtgcctcacacctgtaatcccagcactttgggaggtcgaggcgggtggatcatttgaggtcaggagttcaagaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattacccaggca--atgg-gtgcacctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagatcatgccactgcactccagcctgggcgacagagcgggactccatctcaaa---------aaaaaaaaaaaaaa---------aaaG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80048 314 + 111706 TCggccaggtgcagtgtctcacacctgtaatcccagcactttgggaggtcgaggcaggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcgagtgcctgtaatcccagctacccgggaggctgaggcaggagaattgcttgaacccaggaagcggaggttgcagtgagctgagatcgtgccattgcgctccagcctgggcgacagagcgggactccatctcagg---------aaaaaaaaaaaaaagaaagaaagaaaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 112353 314 + 192460366 TCggccaggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggcaggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaagcggaggttgcagtgagccgagatcgtgccattgcgctccagcctgggcgacagagcgggactccatctcagg---------aaaaaaaaaaaaaagaaagaaagaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108078 323 - 187378091 tcggccaggtgcagtggctcacacctgtaatcccagcactttgggaggtcgaggcgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcaggtgcctgtaattccagctactcgggaggctgaggcaggagaattgcttgaacctgggaagcagaggttgcagtgagccgagatcgtgccattgcgctccagcctgggtgacagagcaggactccatctcaggaaaaaaaaaaaaaaaaaaaaaaagaaagaaagaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 460695 315 - 91754291 TCggccaggtgcagtggctcacacctgtaattccagcacttcgggaggtcgaggcgggtggatcatttgaggtcaggagttcacgaccagcctggccaacatgatgaaaccccatctctactaaaaatacaaaaattagcagggggtggtggcaggtgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaagcggaggttgcagtgagccgagatcgtgccattgtgctccagcctgggcgacagagcaggactccatctcagg--------aaaaaaaaaaagaaagaaagaaagaaaA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 73779243 0 + 74750902 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=893201.000000 s hg38.chr3_KI270935v1_alt 170151 398 + 197351 TCTTGCTaaacagggctgtgtcctggtagtcctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaaataggagggcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggcttgtgaggaggaagagattagcattcgttacgac-aaaactacagttattgcatttgtttttcaccatcatttaaacaatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactcaatctACTAAGCTTGAGTAGGTTATTTGTAGGTAAGAAATCCTGTGTTCAAGTATGAC s panTro4.chr3 199807378 397 + 202329955 -CTTGCTaaacagggctgtgtcctggtagtcctccttttaaatctttatttagagaacttgctcatcttgagccaagttgattag-agtttcctgctgccgcaaataggagggcaagtgagtcactgcatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggcttgtgaggaggaagagattagcgttcattacgac-aaaactacagttattgcatttgtctttcaccatcatttaaacaatacctctgaagccactcctgcaatagattgattattcagctgtttaggaaaacaatttgcagataactcaatctACTAAGCTTGAGTAGGTTATTTGTAGGTAAGAAATCCTGTGTTCAAGTATGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120924433 396 + 123690457 TCTTGCTaaacagggctgtgtcctggtagtcctccttttaaatctttatttagagaacttgctcatcttgagccgagttgattag-agtttcctgctgccacaaataggagggcaagtgagtcattgtatgtggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcaatctgttgggcttgtgaggaggaagagattagcattcattacgac-aaaact--aGTTATTGCATTTGTCTTTCACCATCATTTAAACAATACATCTGAAGCCACTCCTGCAATAGATTGATTATTCAGCTATTTAGGAAAACAGTTTTCAGATAACTCAATCTACTAAGCTTGAGTAGGTTATTCATAGGTAAGAAATCCTGTGTTCAAGTATGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80362 394 + 111706 TCTTGCTaaacaaggctgtgtcctgatagtcctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaaacaggaggacaggtgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggcttgtgaggaggaagagatgagcattcgttacgacaaaaaccacagttaccgcatttgtctttcaccgtcgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactcaatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTCTGTGTTCAAGTATGAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 112667 394 + 192460366 TCTTGCTaaacaaggctgtgtcctgatagtcctcgttttacatctttatttagagaacctgctcatcttgagctgagttgattag-agtttcctgctgccgcaaacaggaggacaggtgagtcactgcatgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgggcttgtgaggaggaagagatgagcattcgttacgacaaaaaccacagttaccgcatttgtctttcaccgtcgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactcaatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTCTGTGTTCAAGTATGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108401 391 - 187378091 tcttgctAAACAAGGCCGTGTCCTGATAGTCCTCGTTTTACATCTTTATTTAGAGAACCTGCTCATCTTGAGCTGAGTTGATTAG-AGTTTCCTGCTGCCGCAAACAGGAGGACAGGTGAGTCACTGCATGCGGAGGACATAGTTTTATTGTCTAGGGGAGAAGGCGCTGTCAAAATCTCT--GTCTGTTGGGCTTGTGAGGAGGAAGAGATGAGCATTCgttatgac-aaaaccacagttACTGCATTTGTCTTTCACCGTCGTTTAAACA-----TCTGAAGCCACTCCTGCCACAGATTGATTATTCAGCTATTTAGGAAAGCAGTTTGCAGGTAACTCAATCTACTAAACCTGAGTAGGTTATTTGTAGGCAAGAAATTCTGTGTTCAAGTATgac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 461010 391 - 91754291 TCTTGCTaaacaaggctgtgtcctgatagtcctcgttttgcatctttatttagagaacctgctcatcttgagctgagttgatt---agtttcctgctgcggcaaacaggaggacaggtgagtcactgcctgcggaggacatagttttattgtctaggggagaaggcgctgtcaaaatctctcagtctgttgagcttgtgaggaggaagagatgagcattcgttacgac-aaaaccacagttactgtatttgtctttcaccgttgtttaaaca-----tctgaagccactcctgccacagattgattattcagctatttaggaaagcagtttgcaggtaactcaatctACTAAACCTGAGTAGGTTATTTGTAGGTAAGAAATTCTGTGTTCAAGTATGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73779243 397 + 74750902 CCTTGCTaaacacggctgtgtcctggtagtcctccttttaaatctttatttagagaacttgctcatcttgagccgagttgatgaacagtttcctgctgcctggaataggagggcaagagagtcacttcatgtggaggacataggtttattgtctagggaagaaggcacagtcaaaatctctcaatgtgttgggcttgtgagaaggaagagattagtgttcatgacgac--aaactacggttactgcatttgtctttcaccat-atttaaacagtagaccttaagctgctcctccaacggattcatcattcagctatttaggaaaacagtttgcagataactcaatctACTAAACTTGAGTAGGTTATTCCTAGGTAAGAAACAATGTGTTCAAGTATGAC i calJac3.chr17 C 0 n 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=6696.000000 s hg38.chr3_KI270935v1_alt 170549 10 + 197351 CTATCTTT--------------AC s panTro4.chr3 199807775 10 + 202329955 CTATCTTT--------------AC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120924829 10 + 123690457 CTACCTTT--------------AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80756 14 + 111706 CTATCTTT----------AAAAAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 113061 15 + 192460366 CTATCTTT---------aaaaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108792 19 - 187378091 ctatcttt-----aaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 461401 24 - 91754291 CTATCTGTaaaaaaaaaaaaaaag i chlSab2.chr15 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e calJac3.chr17 73779640 0 + 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=401569.000000 s hg38.chr3_KI270935v1_alt 170559 245 + 197351 AAAGAAG-AAAAAGAAAGAAATCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGTAAGAAAATGGTTCTCAgctgggcatggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaagaccccttctctgaa-aaaa-----aaaaaaaaaAA--AAAAGTGGTTCTCAAAAGGCAGAGGGTGCatcagcatt s panTro4.chr3 199807785 240 + 202329955 AAAGAAG-AAAAAGAAAGAAATCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGTAAGAAAATGGTTCTCAgctgggcatggtagctcatgcctaaaatcccagcacggacaggcagaggcgggaggattccttgaggccaggagtttgagaccagcctgggcaatagctcaagaccccttctctgaa-aaaa-----aaaaaaaaaA-------GTGGTTCTCAAAAGGCAGAGGGTGCatcagcatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120924839 243 + 123690457 AAAAAAGAAAAAAGAAAGAAGTCCTAGTGGATGGAGAGACTATGGAGAATGATTTTTGGTAAGAAAATGGTGCTCAgctgggcatggtagctcatgcctaaaatcccagcacggacaggtggaggcgggaggatagcttgaggccaggagtttgagaccagcctgggcaatagagcaagaccccttctctgaa-aaaa-----aaaaaaaaaA---AAAAGTGGTTCTCAAAAGGC--AGGGTGCATCAAcatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80770 236 + 111706 AAAAAAAAGAAAAGAGAGAAATCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGTAAGAAAACGGTTCTCAgctggacatggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgg--------gcaagaccccttctctgaa-aaaa-----aaaaaaaaaAA--AAGAGTGGTTCTCCAAAAGC--AGGGTGCCTCAgcatt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 113076 244 + 192460366 aaaaaaaagaaaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGTAAGAAAACGGTTCTCAgctggacatggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaataa-gcaagaccccttctctgaagaaaa-----aaaaaaaaAAA--AAGAGTGGTTCTCCAAAAGC--AGGGTGCCTCAgcatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108811 249 - 187378091 aaagaaaagagaagagagaaatccTAGTGGACAGAGGGACTATGGGGAGTTACTTTTGGTAAGAAAACGgttctcagctgggcatggtagcgcacacctaaaatcccagcatggacagtctgaggtgggaggattgcttcaggccaggagtttgagaccagcctgggcaataa-gcaagaccctttctctgaaaaaaataaataaataaataaa--aagagtggTTCTCCAAAAGC--AGGGTGCCTCAGCATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 461425 149 - 91754291 aaagaaaagaaaagagagaaaTCCTAGTGGACGGAGAGACTATGGAGAGTTACTTTTGGTGAGAAAACGGTTCTCAGCTGGGCATGGTAGCGTACACCTAAAATCCCAGCATGGAC-------------------------------------------------------------------------------------------------------AGTGGTTCTCCAAAAGC--AGGGTGCCTCAgcatt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 971972 232 - 74750902 aaagaaa-agaaagaaagaaATTCTAGTGGGTGGAGAGAACATAGCGAATGATTTTTGGTAAGAAAGTGGTTCTCAgcggggcatggtagctcacgcctataatcccagcactgacaggcggaggttggaggatggcttgaggccaggaatttgagaccagcctgggaaatag--------------cctgga-aaaa---ataaataaaTAAAATAAAAGTGGTTCTCAAAAGAT--AGGGTGCA-CAgcatt i calJac3.chr17 I 9856 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29095887 5911 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1197931.000000 s hg38.chr3_KI270935v1_alt 170804 470 + 197351 ttaacacatgtccagagtgattctgatgcaggtggtccgtggaccccacgttcagaaacactTCCCTTAAAATAAAATGATAGTATCCACTCTTAACAA-----TGTTTGTAAGCCAAAACCATCTCGCTGAAGTTGTCAGGCAGAGAAATTTGAAGCCTTGATCAAGTTTTATTCTAAAAAATACTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGGCTCTCACCAGGATGCAAGTCAGGCCCTTCAGGTTCCGTCAGATTGTCAGACAACTGAAACTT---GTTCTCACTCTGGCCAAACGCAT---AAACTTGGGGAGCAGAGAGCTGGGAGATTTGCGCCTAAAGAGTTGATATTGGAGAGAAACAGGTCTCTC----------CTCTCTCTTCTCTCCCCGTGACCCTCCATTTTCTACTTCACTGAAAGAACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA s panTro4.chr3 199808025 473 + 202329955 ttaacacatgtccagagtgattctgatgtaggtggcccgtggaccccatgttcagaaacactgCCCTTAAAATAAAATGATAGTATCCACTCTTAACAA-----TGTTTGTAAGCCAAAACCATCTCACTGAAGTTATAAGGCAGAGAAATTTGAAGGCTTGATCAAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAATGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGATGCCAGTCAGGCCCTTCAGATTCCGTCAGATTGTCAGACAACCGAAACTTACTGTTCTCACTCTGGCCAAACGCAT---AAACTTGCGAAGCAGAGAGCTGGGAGATTTGCGCGTAAAGAGTTGATATTGGAGAGAAACAGGTCTCTC----------CTCTCTCTTCTCTCCCTGTGACGCTCCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120925082 471 + 123690457 ttaacacacacccagagtgattctgatataggtggtccgtgga--ccacgttaagaaacactACCCTTAAAATAAAATGATAGTATCCACTATTAACAA-----TGTTCGTAAGCTAAAAGCATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGCCTTGATCAAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAATGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGATGCAAGGTAGGCCCTTCAGGTTCCATCAGATTGTCAGACAACTGAAACTTATTGTTCTCACTCTGGCCAAACGCAT---AAACTTGCGGAGCAGAGAGCTGGGAGATTTGAGCGTAAAGAGTTGATACTGGAGAGAAACAGGTTTCTC----------CTCTCTCTTCTCTCCCTGTGACACTCCATTTTCTACTTCACTGAAAGGACCA---AAGCCGTGCC-CTTCATCTCCTTCAATGCCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 81006 461 + 111706 ttaacacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGCATCCACTTTT---AA-----TGTTTGTAAGCTAAAACCATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATCAAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGACGCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCAGACAACTGAAACTTACTGTTCTCACTCTGGCCAAACGCAT---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAGGTCTCTC-------------------CTCTCCCCATGACACTCCATTTTCTACTTCACTGAAAGGACCC---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i rheMac3.chrUn_JH291127 C 0 I 354 s macFas5.chr2 113320 461 + 192460366 ttaacacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactgCCCTTAAAATAAAATGATAGCATCCACTTTT---AA-----TGTTTGTAAGCTAAAACCATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATCAAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGACGCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCAGACAACTGAAACTTACTGTTCTCACTCTGGCCAAACGCAT---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATACTGGAGAAAAACAGGTCTCTC-------------------CTCTCCCCATGACACTCCATTTTCTACTTCACTGAAAGGACCC---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i macFas5.chr2 C 0 I 59 s papAnu2.chr2 109060 461 - 187378091 TTGACACATGCCCAGAGTGATCCTGGTATAGGTGGTCTGTGGACCACATGTTAAGAAATACTGcccttaaaataaaatgatagcatCCACTTTT---AA-----TGTTTGTAAGCTAAAACCATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTAATCAagttttattctaaaaaatattcaTAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGACGCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCAGACCACTGAAACCTACTGTTCTCACTCTGGCCAAACGCAT---ACACTTGCAGAGCAGACAGCTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAGGTCTCTC-------------------CTCTCCCCATGACACTCCATTTTCTACTTCACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i papAnu2.chr2 C 0 I 177 s chlSab2.chr15 461574 461 - 91754291 ttaacacatgcccagagtgatcctggtataggtggtccgtggaccacatgttaagaaatactTCCCTTAAAATAAAATGATAGTATCCACTTTT---AA-----TGTTTGTAAGCTAAAACCATCTTGCTGAAGTTGTAAGGCAGAGAAATTTGAAGACTTACTCAAGTTTTATTCTAAAAAATATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGCCAGAATGAACTGACCTTGACTCTCACCAGGACGCAAGCCAGGCCCGTCAGGTTCCATCAGGCTGTCAGACAACTGAAACTTACTGTTCTCACTCTGGCCAAACGCAT---ACACTTGCAGAGCAGACAACTGGGAGATTTGAGCGTCAAGAGTTGATATTGGAGAAAAACAGGTCTCTC-------------------CTCTCCCCATGACACTCCATTTTCTACTTTACTGAAAGGACCA---AAGCCATGCC-CTTCATCTCCTTCAATGCCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 972204 456 - 74750902 ttaacacatgcccagagtgattctgatacaggtggtctatggaccacacgttaagaaacactgCCCTTAAAATAAAAtgatagtatctactcttaacaa-----tgtttgtaagctaaaatcatcttgctgaagttgtaaggcatagaaatgtggagcctcgagcaagttttattcTAAAAAGTATTCATAGCCTTGTTCTTGCTGCTCAAGTGTTGGGTAGAATGAACTGACCTTGACTTTCACCAGCATGCAAGCCAGGCCCGTCAGGTTCCATC----CGTCAGACAATGGAAACTTATTGTTCTCACTCTGGCCAAATGCTT---AAACCTGCAGAGCAGACAGCTGGGAAATTT-------AAGTGTTGGTATTGGAGAGAAACAGGTCTCTC-----------------TTCTCTCCCCATGACACTCCATTTTCTACGTCACTGAAAGGACCA---AAGCTATGCCACTTCCTCTCCTTCGATGTCCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29101798 473 + 31377067 ttaacacatgtgctgggtggttttgatacccatgatctatggaccacattttaaggaacactgCCCTTAAAATAAAAtgatagtatctgctctt---aagatcttttttgtaagctaaaaccaccttatcgaggttgtaaggcactgaaatttggagtcttgatcaagcttgGTTCTCAGGATT-TTCCCAGCCTTATTCTTGGTGCTCAAG-GTTTGCTGGAATGAACAGATCTTGTCGTTTACGAGA--GCACTCCCAGCTCCTCAGCTCCTAGCAGATTGTTAGACAACCAAGGCCTGTCGTTCTTGCCCTGGCCAAATCCATGACATATTTGCAGAGCTGAGAGCTATG-GATTTGACTGCGAAGAGCTGATATTTGAGAGAAATGGGTTTTTCCTCTCCTCTCCTCTCCCTCCTTTCTCTACGACAATTCATCTTCTACATCACTGAAAAGACCATCTAA---------CTTGATCTACATC-----CCA i canFam3.chr33 I 5911 C 0 e mm10.chr16 65461757 2469 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2115323.000000 s hg38.chr3_KI270935v1_alt 171274 931 + 197351 GAGCCTTCTCCGC--------------ACCCTCCCCGGGGCCCCGGGGCTCC------------------------------------------------------------------------CTCCTGCCC----GGATGGCTCACTGCTCTGC--------------------------------------CTCTGTGTC--T--CCGACGTTCTTTCTGCCT-----------------------TTCTCCT------TCTCTCCTGCCTGTGAGCATGTTCAGGTGTCTGTTGGCCTAAAACAAGTCTGTCATCCGT-CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCATGAAAGCCGGGCTTCCCCT-GCCGCCTCTTCTTTACCA-------------CGCACTGCTCGCTCTGCCCCCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTTTCTCCAGTCCTCACGCGTCTC--ATCAGTTCGGCCCCATCCATTCATTCATTCATGAATCTGACAGATGTGTATTGCGCCCCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCCTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACGCTCCCGGGCCctccactccactccccttgccacctctctccc-ccgctccacgccCAGATGACAT----------------GTCTCCAGccctttccctctcctgctgcccctccctctcTGGCCACCCTGCGTCTACTCTCACGCCTTACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAACAGGTCCAGGTCAATCTTTCCTTGCAAGC-TTtcttc---cttccttctgttcatgctaacaacagtcccccagacatccagcccagaaa-gctgtgggtcc-tct-ggatttctttctcttccttgtcccctgtgtcctagtcagtactcgttgatcttcctcccaagtgttcac-cccatcgcgtcctcttgtttgctttgccacatcctccccgtcgctttgactactgc s panTro4.chr3 199808498 931 + 202329955 GAGCCTTCTCCGC--------------ACCCTCCCCGGGGCCCTGTGGCTCC------------------------------------------------------------------------CTCCTGCCG----GGATGGCTCACTGCTCTGC--------------------------------------CTCTGTGTC--T--CCGACGTTCTTTCTGCCT-----------------------TTCTCCT------TCTCTCCTGCCTGTGAGCATGTTTAGGTGTCTGTTGGCCTAAAACAAGTCTGTCATCCGT-CTGTGTCCTCCTCGT------------------CCCTCCAGCAGCGTGAAAGCCGGGCTATCCCT-GCCGCCTCTTCTTTACCA-------------CGCACTGCTCGCTCTGCCCCCACCTCACTCACTTCGCTCAAGCCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACAGCAAAAACGATTTTCTCCAGTCCTCACGCGTCTC--GTCAGTTCGGCCCCATCCATTCATTCATTCATGAATCTGACAGATGTGTATTGCGCGTCCCCCTCCACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCCTCATTGAAGCTGACGGGTCGTGCTCCACCGTCCACGTTCCCGGGCCCTCCACTCCACTCCCCTTGCCACCTCTCTCCC-CCGCTCCGCGCCCAGATGACAT----------------GTCTCCAGCCCTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGAGTCTACTCTCAGGCCTGACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAGCAGGTCCAGGTCAATCTGTCCTTCCAAGC-TTTCTTC---CTTCCTTCTGTTCATGCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTGTGGGTCG-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGTGTCCTAGTCAGTACTCGTTGATCCTCCTCCCAAGTGTTCAC-CCCATCGCGTCCTCTTGTTTGCTTTGCCACATCCTTCCCGTCGCTTTGACTACTGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120925553 945 + 123690457 GAGCCTTCTCCGC--------------ACCCTCCCCAGGGCCCTGTGGCTCC------------------------------------------------------------------------CTCCTGCCC----GGATGGCTCACTGCTCTGC--------------------------------------CTCTCTGTC--T--CCGACGCTCTTTCTGCCT-----------------------TTCTCCT------TCCCTTTTGCCTGTGAGCACGTTTAGGTGTCTCTTGGCCTAAAACAAGTCTCTCATCCGT-CTGTGTCCTCATCCC----TGTCTTTTGTTTTGCCCTACAGCACCGTGAAAGCGGGGCTTCCCCT-GCCGCCTCTTCTTTACCA-------------AGCGCTGCTCGCTCTGCCCCCACCTCAGTCACTTTACTCAAGCCA---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACCGCACAAACGATTTTCTCCAGTCCCTACGTGTCTC--CTCAGTTCAGCCCCATCCATTTATTCATTCATGAATCTGACAGATGTGTATTGTGCGCCCACCTCCCCGTGCTCTCCCTGGCCAGCGGCCCCGTG----CCACC-ACCCAGCTTCGCCCTCATTGAAGCTGACGGGTCCTGCTCCACTGTCCACGTTCCCGGGCCCTCCACTCCACTCCCCTTGCCACCTCTCTCCC-CCGCTCCGCGCCCAGATGACAC----------------GTCTCCAGCCGTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGCATCTACTCTTACGCCTTACAAATCTGTGCTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAATGGGTCCAGGTCAATCTTTCCTTCCAAGC-TTTCTTC---CTTCTTTCTGTTCATTCTAACAACGGTCCCCCAGACATCCATCCCAGAAA-GCTCTGGGTCC-TCT-GGATTTCTTTCTCTTCCTTGTCCCCAGGGTCCTAGTCAGTACAAGTTGCTCTTCCTCCCAAGTGTTTAC-CCCATCGCGTCCCCTTGTTTGCTTTGCCACAGCCTCCCTGTCACTCTGACTACTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 81821 940 + 111706 GAGCCTTCCCCGC--------------ACCCTCCCCGGGGCCCTGTGGCTCC------------------------------------------------------------------------CTCCTGCCT----GGATGGCTCACTGCTCTGC--------------------------------------CTC--TGCC--T--CTGACGCTCTTTCTGCCT-----------------------TTCTCCT------TCTCTTTTGCCTGTGACCATGTTTAGGTGTCTCTTGGCCTAAAACAAGTCTCTCATCCGT-TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCCTCTTCTTTACCA-------------CGCGCTGCTCGCCCTGCCCCCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTTTCTACAGTCCCCGCGCGTCTC--GTAAATTCGGCCCCATCCATTTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCTTCATTGAAGCTGACAGGTCCTGCTCCACCGTCCACTTTCCCGGGCC-----CTCCATTCCCCTTGCCGCCTCTCTCCT-CCCCTCCAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGCGTCTACTCTTACACCTTACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAGCAGGTCCAGGTCAATCTTTCCTTCCAAGC-TTTCTTC---CTTCCTTCTGTTCATTCTAACAACAGTCCCCTAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAGTCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG--CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCACTCTGACTATTGC i rheMac3.chrUn_JH291127 I 354 C 0 s macFas5.chr2 113840 995 + 192460366 GAGCCTTCCCCGC--------------ACCCTCCCCGGGGCCCTGTGGCTCCCTCCTCCTTCAATGCCCACCAGAGCCTTC--CCCGCA-----------CCCTCCCCGGGGCCCTGTGG----CTCCTGCCT----GGGTGGCTCActgctctgc--------------------------------------ctc--tgcc--t--ctgacgctctttctgcct-----------------------TTCTCCT------TCTCTTTTGCCTGTGACCATGTTTAGGTGTCTCTTGGCCTAAAACAAGTCTCTCATCCGT-TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCCTCTTCTTTACCA-------------CGCGCTGCTCGCCCTGCCCCCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTTTCTACAGTCCCCGCGCGTCTC--GTAAATTCGGCCCCATCCATTTATTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGcc-----ctccattccccttgccgcctctctcct-cccctccAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAGCAGGTCCAGGTCAATCTTTCCTTCCAAGC-TTTCTTC---CTTCCTTCTGTTCATTCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAGTCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG--CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCtccctgtcactctgactattgc i macFas5.chr2 I 59 C 0 s papAnu2.chr2 109698 937 - 187378091 GAGCCTTCCCCAC--------------ACCCTCCCCGGGGCCCTGTGGCTCC------------------------------------------------------------------------CTCCTGCCT----GGATGGCTCActgctctgc--------------------------------------ctc--tgcc--t--ctgacgctctttctgcct-----------------------ttctc---------ctcTTTTGCCTGTGACCATGTTTAGGTGTCTCTTGGCCTAAAACAAGTCTCTCATCCGT-TTGTGTCGTCCTCAT-CGCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCGTCCCCTCGCTGCCTCTTCTTTACCA-------------CGCGCTGCTCGCTCTGCCCCCACCTCAGGCACTTGGCTCAAGCCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTTTCTACAGTCCCCGCGCGTCTC--GTAAATTCGGCCCcatccatttatttgttcatgaATTTGACAGATGTGTATTGAGCACCCACCTCAACCTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCTTCATTGAAGCTGACGGGTTCTGCTCCACCGTCCACTTTCCCAGGCC-----CTCCATTCCCCTTgctgcctctctcct-cccctccaggCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGGTTTCCTGCCTAGCTCATGCAATGCAGCAGGTCCAGGTCAATCTTTCCTTCCaagc-tttcttc---cttccttctgttcatTCTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-cgatttcttcctcttccttgtcCCCAATGTCCTAGTCGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG--CCCATCACGTCCTCTTGTTTGCTTTGCCACCTCCTCCCTGTCACTCTGACTATTGC i papAnu2.chr2 I 177 C 0 s chlSab2.chr15 462035 941 - 91754291 GAGCCTTCCCCGC--------------ACCCTCCCCGGGGCCCTGTGGCTCC------------------------------------------------------------------------CTCCTGCCT----GGATGGCTCActgctctgc--------------------------------------ctc--tgcc--t--ctgacgctctttctgcct-----------------------TTCTCCT------TCTCTTTTGCCTGTGACCATGTTTAGGTGTCTCTGGGCCTAAAACAAGTCTCTCATCCAT-TTGTGTCGTCCTCAT-CCCTGTCTTTTGTTTTGCCCTCCAGCACCGTGAAGGAGGGGCATCCCCTCGCTGCCTCTTCTTTACCA-------------CGCGCTGCTCGCTCTGCCCCCACCTCAGGCACTTGGCTCAAGTCG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTTC-CCAACCGCAAGAACGATTTTCTACAGTCCCTGCGCGTCTC--GTAAATTTGGCCCCATCCATTTCTTTGTTCATGAATTTGACAGATGTGTATTGAGCACCCACCTCAACGTGCTCTCCCTGGCCGGCGGCCCCGTG----CCACC-ACCCAGCCTCACCTTCATTGAAGCTGACGGGTCCTGCTCCACCGTCCACTTTCCCGGGCC-----CTCCATTCCCCTTGCCGCCTCTCTCCTCCCCCTCCAGGCCCAAATGACAT----------------GTCTCCAGCACTTTCCCTCTCCTGCTGCCCCTCCCTCTCTGGCCACCCTGCGTCTACTCTTACGCCTTACAAATCTGTACTTCT-CCCTGACTTCCCACCCA-TATGCTGGCCTCACCCTCCCAGGGATTTCCTGCCTAGCTCATGCAATGCAGCAGGTCCAGGTCAAtctttccttccaagc-tttcttc---cttccttctgttcattcTAACAACAGTCCCCCAGACATCCAGCCCAGAAA-GCTCTGGGTCC-TCT-TGATTTCTTCCTCTTCCTTGTCCCCAATGTCCTAGTTGGTACTAGCTGCTCTTCCT-CCAAGTGTTTG--CCCATCACGTCCTCTTGTTTGCTTTGCTACCTCCTCCCTGTCACTCTGGCTATTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 972660 990 - 74750902 GAACCTTCTCCAC--------------ACCCTCCCCAGGGCCCTGTGGCTCC-------CTCCTGCCCCAATGGCTCACTCGTCCAGAACCTTCTCCACGCCCTCCCCAGGGCCCTGTGGCTCCCTCCTGCCC----GGATGGCTCACTCCTCGGC--------------------------------------CTC--TGTCTGT--CTCAGGTGCTTTCTGCCT-----------------------TTCTCCT------TCTCTTTCA-CTGTGAACATGTTCAGGTGTCTCTGGGCCTAAAACAAGTCTCTTGTCGGTCTTGTGTCCTCCGTGT-CCCAGTCTTTTGTTTTGCCCTCCAGTGCGGTGACAAAGGGCCTTCCCCTCACTGCCTCTTCTTCCCTA-------------CGCACTGCTCACTCTG-CCCCACCTCAGTCACTTTGCTCAAGCTG---------TTTTCCT-CAGAGCTACCAGA------------------------ATCTCCTCC-CCAAGTGCAAAAACAATTTTCTCCAGTCCCCACTCGTCTT--GTAAATTCAGCCCCATCCATTCA-TCATTCATGTAT-GGACAGATGTGT-TTGAGTGCCCACCTCAATGTTCTCCCCCTGGCCAGCAGCCCCATGCTGTCCGTC-ACCCAGCCTCCTCCTCATTG-AGCTAAAGGGTCCTGCTCCACCGTCCACTGTCCCTGGCC-----CTCCACGCCCCATCCCGCCTCCCTCC--CTACTCCGTGCCCAGATGGCGT---------------CGCCTCCAGCCCTTTCCCTCTCCTGCCGCCCCTCCCTCTCTGGCCACACTGCACCTACTCTTCTGCCTTACAAATCTGTACTTCT-TCCTGACTTCCCACCCA-GATGCCAGACTC-CCCTCTCCAGGATCTCCTGCCTCACTTATGCAACACA-----TCCACGTCAAACTTGCCCTCCAG---------C---CTTCCTATTGTCAGTTCCATCAACAGTCCC--AGACATCCAGGCCAGAAA-GCTCTGGGTCCGCCT-CGATTTCTTTC---TCCTTGTCCCCCGTGTCATAGTTGGTAGTAGTTGCTATTCCTCCCAAGTGTTTAC-CCCATCACGTCCTCTTGTTCGCTTTGCCACATCCTCCCCATCAATCCGACCACTGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29102271 1081 + 31377067 GAACCCTCTCCACCAGGAAACATCTCGGCCTTCACCAGGTCCCT-------C------------------------------------------------------------------------ATCCTGCCCCAGACAATGGTCCGAATCTCTACCAAAAGGCTacacacacacacagacacacacagacacacTCAGGGCC--TTGTCTGCTCCCTTTCTCCCTTCTCAGTTGGCTTAGCCCATCACTTCTCTCTGAGAGTCTCTTCTGCTGACAAACACATCTAGATTTCTCTTGACCTAAAGTAAGTCCTTCATCCATCTTATGTCCCCCTTATGCCCTATCATTTATTTCACGCATGAGCATCCTGAAAGACAGGTCTACACTCTCCATCTCTTTTTTATCATCTATCTACTCCTTACATTCTGCCCTCCACCCCAACCCCACTCACCTCACCAAAAACAGTTTTAGTTTTTTCCTAAAAAGTTACTAAAAACCAAAAACAAAAAACAAAAAACAACTCCTTCTTCATCACCAAAAGCAATTTTCTTCAGTCCCTGTTAGTCTCTGTGAAATCTGGCATGATCCAACcatctggtca--------acaagtatttattgagcgtccacATCAATGT--TCACCTCAGCCATTGTCCCCTTA----ATATCTGCATTACATTGTCTTCCTTGAAGCTGAACAATTCTGCTCATCCAGCACTCTCCCCATTCC-----TTCTGCTCCCTGGGCGATTTctctttt-cttctcagcttccagatgaagtcggtcttctgggtgtcctctccagcc--tttcctttctttcta-cactttctttctggctagactacatttactttcacaccttacaaatctataattctaccctggcttcgcacccgtttttccagactcacctttccagtgatttcctggctggcctgtcaaatgcaa------cacgccaaacttttcctcaaactgtttcttctatcttccttaagttaattgtaacatcagtccctcaggtactcaggacagaaaccccctgagtca-tctctgattccatcctcttccttgtccccagcatcG-GTTTGGCACCAACGATTATCTCT-CTGAATTATTGCTCCCATTGTGGTCTCTTGTTCACTTTGCTGTGTTAACCTTATTACTCTGACCGATGC i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=307158.000000 s hg38.chr3_KI270935v1_alt 172205 178 + 197351 ggcagcctcctcactgcccctgctGACTCGGGTTCCGCACCCCTGCTCTCAGCCTCCACCGCACCCCTGTGGGTTGATCCTCAGCTCTGAGGGCCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG s panTro4.chr3 199809429 178 + 202329955 GGCAGCCTCCTCACTGCCCCTGCTGACTCGGGTTCCGCACCCCTGCTCTCAGCCTCCACCACACCCCTGTGGGTTGATCCTCAGCTCTGAGGGCCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCTCGAATTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120926498 178 + 123690457 GGCAGCCTCCTCACTGCCCCTGCTGACTCCGGTTCCACACCCCTGCTCTCAGCCTCCATCACACCCCTGTGGGTTGATCCTCAGCTCTGAGGGCCAGGAGGGAGGGTTGCTGCTGCTGTCTCCTTAGCGCGAGTTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82761 177 + 111706 AGCAGCCTCCTCACTGCCCCTGCTGACTCCGGTTCCACAGCCCTGCTCTCAGCCTCCATCACACCCCTGTGGGTTGAACCTCAGCTCTCAGGGCCAGGAGGGAGGGTTTCAGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTG-CCTGCCTGCCCTGGAAGGTGTCTG i rheMac3.chrUn_JH291127 C 0 I 1 s papAnu2.chr2 110635 177 - 187378091 AGCAGCCTCCTCACTGCCCCTGCTGACTCCAGTTCCACAGCCCTGCTCTCAGCCTCCATCACACCCCTGTGGGTTGATCCTCAGCTCTCAGGGCCAGGAGGGAGGGTTTCGGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGACTG-TCTGCCTGCCCTGAAAGGTGTCTG i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 462976 178 - 91754291 AGCAGCCTCCTCACTGCCCCTGCTGACTCCGGTTCCACAGCCCTGCTCTCAGCCTCCATCACACACCTGTGGGTTGATCCTCAGCTCTCAGGGCCAGGAGGGAGGGTTTCAGCTGTTGTCTCCTTAGCTTGAACTGCTTTGGAAAATGGCCTGCCCTGCCTGCCCTGGAAGGTGTCTG i chlSab2.chr15 C 0 I 67 s calJac3.chr17 973650 153 - 74750902 TGCTGCCTC--CACTGCTCCTGCTGACTCTGGCTCCACACCCCTGCTCTCAGCCTCCATGGCACCCCCGTGG------------------GGACCAGGAGGGAGAGTTTCTGCTGTTGTCTTCCTAGCTTGAATTACTTTGGAAAATGTCCTGCATTGCCCACCCTGGAAGGT----- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29103352 153 + 31377067 AGCAGCCTC-TAACTGCTCCTCTTGATT---GCTCCAC-TCCCTGCCTTCACCCGCTGC----------TGGCTTGATCTTCAGCTATGGGAACCACAAAGGAGAGTCTCT--CATCACTTCCTTAGCAGGGAT--CTTTGAGAGAATGCCTGTATTACCCTCCCTGGAAGG------ i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e macFas5.chr2 114835 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=11869.000000 s hg38.chr3_KI270935v1_alt 172383 43 + 197351 GTAGGTCCTGGGGTCACAGACTGGTGACTGGCATTGGTCCTGG s panTro4.chr3 199809607 43 + 202329955 GTAGGTCCTGGGGTCACAGACTGGTGACTGGCATTGGTCCTGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120926676 43 + 123690457 GTAGGTCCTGGGATCAGAGACTGGTGACTGGCATTGGTCCTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82939 30 + 111706 GTAGGTCCTGGGGCCATGG-------------GTAGGTCCCGG i rheMac3.chrUn_JH291127 I 1 C 0 s papAnu2.chr2 110813 29 - 187378091 GTAGGTCCTGGGGCCATGG-------------GTAGGTCCC-C i papAnu2.chr2 I 1 C 0 s canFam3.chr33 29103505 5 + 31377067 -CAGGC------------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e calJac3.chr17 973803 0 - 74750902 C e chlSab2.chr15 463154 67 - 91754291 I e macFas5.chr2 114835 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=57343.000000 s hg38.chr3_KI270935v1_alt 172426 28 + 197351 GTGTCTGCGTAGGTCCCGGGGGCGTGGG s panTro4.chr3 199809650 28 + 202329955 GTGTCTGCATAGGTCCCGGGGGCGTGGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120926719 28 + 123690457 GTGTCTGCATAGGTCCTGGGGGCGTGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82969 28 + 111706 GTGTCTGCATAGGTCCTGGGGGCATGGG i rheMac3.chrUn_JH291127 C 0 I 68 s papAnu2.chr2 110842 28 - 187378091 GTGTCTGCGTAGGTCCTGGGGGCATGGG i papAnu2.chr2 C 0 I 557 s chlSab2.chr15 463221 28 - 91754291 GTGTCTGCATAGGTCCTGGGGGCATGGG i chlSab2.chr15 I 67 C 0 s calJac3.chr17 973803 26 - 74750902 --GCCTGTGTAGGTCCTGGGGACATGGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29103510 22 + 31377067 ------GCTTGGATCCTGAGGGCATGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e macFas5.chr2 114835 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=287460.000000 s hg38.chr3_KI270935v1_alt 172454 212 + 197351 TCTAGTGGTC-------------AGAGACTGGTGACTGGCATTG-----------------CCATTGTGACACGGATGTCAGAAACCAGA--------------ATCCTCAGAGGGAGGC-CACTGGGCAAGAATGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TACTTCCAGCGCGTCTGTGTGCG-TGGCAGGGTGGCTTCTGTAATAAGAAATGGCCA-CGCCAAGGGATTTCT--CGTTTCTGCGGGAGACATTG--T s panTro4.chr3 199809678 212 + 202329955 TCTAGTGGTC-------------AGAGACTGGTGACTGGCATTG-----------------CCATTGTGACACGGATGCCAGAAACCAGA--------------ATCCTCAGAGGAAGGC-CACTGGGCAAGAATGACCTTCGTCTGGTTGTGACTGAGGA--------AAGA-TACTTCCAGCGCGTCTGTGTGCA-TGGCAGGGCGGCTTCTATAATAAGAAATGGCCA-CGCCAAGGGATTTCT--CGTTTCTGCGGGAGACATTG--T i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120926747 214 + 123690457 TCTAGTGGTC-------------AGAGACTGGTGACTGGCATTG-----------------TCATTGTGACACGGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGGC-CACTGGGCAAGAACGACCTTCCTCTGGTTGGGACTGAGAA--------AAGA-TACTTCCAGCGCATCTGTGTGCA-TGGCAGGACAGCTTCTATAATAAGAAATGGCCA-CACCAAGGGATTTCT--CGTTTCTGCGGGAGACATTGTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83065 213 + 111706 TCTTGTGGTC-------------AGAGGCTGGTGACTGGCATTG-----------------CCGTTGTGACACGGATGCCAGAAACCGGA--------------ATCCTCAGAGGGAGGC-CGTTGGGCCAGAATGACCTTCCTCCGGCTGTGACTGAGGA--------AAGAGGACTTCCAACGCGTCTGTGTGCACCTGCGGGGCAGCTTCCGTAAC-AGAAATGGCCA-CGCCAA-GGATTTCT--CATTTCTGC-GGAGACATTGTCT i rheMac3.chrUn_JH291127 I 68 C 0 s papAnu2.chr2 111427 213 - 187378091 TCTTGTGGTC-------------AGAGGCTGGTGACTGGCATTG-----------------CCGTTGTGACAC-GATGCCAGAAACCGGA--------------ATTCTCAGAGGGAGGC-CGTTGTTCCAGAATGACCTTCCTCCGGCTGTGACTGAGGA--------AAGAGGACTTCCAGCGCGTCTGTGTGCACCTGCAGGGCAGCTTCTGTAACAAGAAATGGCCA-CGCCAA-GGATTTCT--CATTTCTGC-GGAGACGTTGTCT i papAnu2.chr2 I 557 C 0 s chlSab2.chr15 463249 206 - 91754291 TCTTGTGGTC-------------AGAGGCTGGTGACTGGCATTG-----------------CCGTTGTGACACGGATGCCAGAAACCAGA--------------ATCCTCAGAGGGAGG---------CCAGAATGACCTTCCTCTGGTTGTGACTGAGGA--------AAGAGGACTTCCAGCGCATCTGTGTGCACCTGCAGGGCAGCTTCTGTAACAAGAAATGGCCA-CGCCAA-GGATTTCT--CGTTTCTGC-GGAGACATTGTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 973829 215 - 74750902 TCTCGCCGTT-------------GGAGGTGAGTGACTGGCATTG-----------------CCACTGTGACATAGATGCAGGAGGTCAGAGTCCTGAGGTGTGTGTCCTCAGAGGGAGGC-CACTGGGTGAGCATGAGCTTCCTCTGGTTGTGACTGAGCA--------GAG--TCCTTCCAGTGTGTCTGTCTGC---------------TCTGCAACAAGATACTGCCA-CACTGAGGCGTTTCTACACTTTCTGTGGGGGACATTGTCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29103532 246 + 31377067 TCTAATTGTCTTATCAGGGTCATGAAGACGAGTGACTGGAATCGTTCCTATCATCCTCTCACAACTGTGATAAGAAAATCAGGATCCTGA-------AGCAAGTGTCCTTAGGGGGAGGCTTTTTGGTTCTGGCTGATTCTCATC----TGTGGCTGAGAAGCATGTTCAATAGTCTTGTCCTTAGGTCTATCTGTA-CTGTAGAGTGCTTCCTGGA---GGGAATGCCCATTACCAAGA---------CGTTTCTGTTGGAGACATTGT-- i canFam3.chr33 C 0 I 7 e mm10.chr16 65461757 2469 - 98207768 I e macFas5.chr2 114835 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=300391.000000 s hg38.chr3_KI270935v1_alt 172666 245 + 197351 TCAGTTTtgtagccggcagcttaaattcaaaatgcattttaaacatgttttcccctttctcttgggtttccaaatacaaccttgaggcagctgcaaaggccgttttcctcagcctaaaaatagacttcacgc-------------------------------------------------------------ccctcccttttctcacgat----------------------------------------------------------------------------------------ctgtacacactccctccCT------------------------------CTTCTCACCGTCTGTACACACTCCCTCccttttcttgtcatctgtatacactccctcccttttcttactgtctgt s panTro4.chr3 199809890 336 + 202329955 TCAGTTTtgtagccggcagcttaacttcaaaatgcattttaaacatgttttcccctttctcttgggtttccaaatacaaccttgaggcaactgcaaaggccgttttcctcagcctaaaaatagacttcacactccctccctcttctcaccgtctgtacacactccctccCTTTTCTTGTCGTCTGTACACACTCCCTCCCTCTTCTCACCGT----------------------------------------------------------------------------------------CTGTACACACTCCCTCCCTTTTCTTGTCGTCTGTACACACTCCCTCCCTCTTCTCACCGTCTGTACACACTCCCTCCCTTTTCTTGTCGTCTGTATACACTCCCTCCCttttcttactgtctgt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120926961 271 + 123690457 TTGGTTTtgtagctggcagcttaacttcaaaatgcattttaaacatgttttcccctttcccttgggtttccaagtataaccttgaggcaactgcaaaggccgttttcctcagcctaaaaatagactccacgc-------------------------------------------------------------tcctcccttttctcacgat----------------------------------------------------------------------------------------ctgtatacactccctccttcttctcaccgtctgTATACACTCCCT----TTTCTCACCGTCTGTATACACTCCCTCCCTTTTCTCGCCATCTGTATACACTCCCTCccttttctcaccatctgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83278 244 + 111706 TCAGTTTtgcagccggcagtttaccttcaagatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagcctagaaatagactccatgc-------------------------------------------------------------ccctcccttttctcgctgc----------------------------------------------------------------------------------------ctgtatacaccccctccCT------------------------------TTTCTCGCCGCCTGTATACACCCCCTCCCTTTTCTCGCCGCCTGTATACACCCCCTCCCTTTTCTCGCCGCCTGT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 111640 332 - 187378091 TCAGTTTTGCAGCCGGCAGTTTACCTTCAAGATGCATTTTAAA-GTTCTTTCCGCTTTCTCTTGggtttccaaatataactttgagGGAACTGCAAAGGCCGTTTTCCTTAGCCTAGAAATAGACTCCACGC-------------------------------------------------------------CCCTCCCTTTTCTCATTGCCTGTATACACTCCCTCCCTTTTCTCGCCGCCTGTATACACCCCTCCCTTTTCTCGCCGCCTGTATACACCCCTCCCTTTTCTCGCCATCTGTATACACCCCCTCCCT------------------------------TTTCTCGCCGTCTCTATACACCCCCTCCCTTTTCTCGCCGTCTGTATACACCCCCTCCCTTTTCTCGCCATCTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 463455 244 - 91754291 TCAGTTTTGCacccggcagtttaccttcaaaatgcattttaaa-gttctttccgctttctcttgggtttccaaatataactttgagggaactgcaaaggccgttttccttagcctaaaaatggactccacgc-------------------------------------------------------------ccctcccttttctcgccgt----------------------------------------------------------------------------------------ctgtatataccccctccct------------------------------tttctcgccatctgtatacACTCCCTCCCTTTTCTTATTGCCTGTATACACCCCCTCCCTTTTCTCATTGCCTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 974044 176 - 74750902 TCAGTTTtgtagccggcagcttaacttcaacatacattttaaa--ccttttcccctttctcttgggtttctaaatacaaccttgaggcaactgcaaaggcctttttcctctgccttaaaatacgctccacgc-------------------------------------------------------------ccctcccttttctcactgt----------------------------------------------------------------------------------------gcatatacactcccttcca------------------------------------------------------------------gtcatcta------------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103778 7 + 31377067 I e macFas5.chr2 114835 0 + 192460366 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=2734.000000 s hg38.chr3_KI270935v1_alt 172911 20 + 197351 atatactcccttccatt--t--------------------------------ct s panTro4.chr3 199810226 52 + 202329955 atatactcccttccatt--tatctcaccatctgtatatactcccttccatttct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120927232 52 + 123690457 atacactcccttccatttat--ctcaccgtctgtatacactcccttccatttct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83522 20 + 111706 ATACACCCCCTCCCTTT--T--------------------------------CT i rheMac3.chrUn_JH291127 C 0 I 273 s macFas5.chr2 114835 20 + 192460366 atacactcccttccatt--t--------------------------------ac i macFas5.chr2 C 0 I 4 s papAnu2.chr2 111972 20 - 187378091 ATACACCCCCTTCCATT--T--------------------------------AC i papAnu2.chr2 C 0 I 4 s chlSab2.chr15 463699 20 - 91754291 GTACACCCCCTCCCTTT--T--------------------------------CT i chlSab2.chr15 C 0 I 633 s calJac3.chr17 974220 1 - 74750902 ----a------------------------------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103778 7 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=596936.000000 s hg38.chr3_KI270935v1_alt 172931 253 + 197351 ctgcgtgcgaggatcgaattatat--gtcttcctaaaagttgcaggggctaaaaccttgagagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaataatgtcagccagaggtccggacggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggcttt--------------------cccctctgaaaatt s panTro4.chr3 199810278 273 + 202329955 ctgcgtgcgaggatcgaattatgt--gtcttcctaaaagttgcaggggctaaaaccttgaaagagacaaaccacatctgaaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaataatgtcagccagaggtccggacggactgggacccagaagagccaccagaacaagacatgcggacacaggactcagcccgattcttgcgtgccttccttatcaaggctttactttggaaacccaggctttcccctctgaaaatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120927284 253 + 123690457 ctgtgtgcgaggatcgaattatgt--gtcttcctaaaagtttcaggggctaaaaccttgaaagagacaaaccacatctggaaatccagctgcaaaatcccagaaattacttcaagacagctc---------------ttgttaaaataatgtcagcccgaggtccagacggactgggacccaaaagagccaccagaacaagacacaccgacacaggactcagcccgattctcgtgtgccttccttatcaaggcttt--------------------cccctctgaaaatc i nomLeu3.chr11 C 0 I 305 s rheMac3.chrUn_JH291127 83815 290 + 111706 ctatgtgcgaggattgaactatgtgggtcttcctaaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattacttcatgacaactccttaaaatctggccgttgttaaaataatgtcagctcgaggtccagacggactgggacccaaaagagccaccagaacaagacacatggacacaggactcagcccaattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i rheMac3.chrUn_JH291127 I 273 C 0 s macFas5.chr2 114859 290 + 192460366 ctatgtgcgaggattgaactatgtgggtcttcctaaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattactttatgacaactccttaaaatccggccgttgttaaaataatgtcagctcgaggtccagacggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i macFas5.chr2 I 4 C 0 s papAnu2.chr2 111996 288 - 187378091 CTATGTGCGAGGATTGAACTATGT--GTCTTCCTAAAAGTTTCAGGGGCTAAAATCTTGAAAGAGACAAACCACATCTGGAAACCCAGCTGCAAAATCCCAGAAATTACTTCATGACAACTCCTTAAAATCCGGCCGTTGTTAAAATAATGTCAGCTCGAGGTCCAGACGGACTGGGACCCAAAAGAGCCACCAGAACAAGACACGTGGACACAGGACTCAGCCCGATTCTTGCGCGCCTTCGTTATCAAGGCTTTCCCTTGGAAACCCATGCATTCCTCTCTGAAAATT i papAnu2.chr2 I 4 C 0 s chlSab2.chr15 464352 288 - 91754291 ctatgtgcgaggattgaactgtgt--gtcttcctaaaagtttcaggggctaaaatcttgaaagagacaaaccacatctggaaacccagctgcaaaatcccagaaattacttcatgacaactccttaaaatccggccgttgttaaaataatgtcagctcaaggtccagacggactgggacccaaaagagccaccagaacaagacacgtggacacaggactcagcccgattcttgcgcgccttccttatcaaggctttcccttggaaacccatgctttcccctctgaaaatt i chlSab2.chr15 I 633 C 0 s calJac3.chr17 974221 286 - 74750902 ctggatgcaaggagctaattatgt--atcttcctgaaagtttcaggggct--aatcttgaaagagacaagccacatctggaaatccagctgcaatattccagaaattgcttcaagacagctcattcaaatccagccattatcaaaataatgtcagcctgaggtccagacggaccgggacctgaaagagccaccagaacaagacacgcgggcacaagactcagcccaatttttacatgacttccttatccagattctcctttctaaacccgtgctttcccctctgaaaatt i calJac3.chr17 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103778 7 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=246572.000000 s hg38.chr3_KI270935v1_alt 173184 156 + 197351 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttaTGAATTAAACTATCCGTTTAATATAATATAAACTCTCTGCAAGCAGCGAGAGCCTCCGCATCTGCGCTGGG-- s panTro4.chr3 199810551 156 + 202329955 aaagcagctactttaagtagaaatctggctgcttcccctttactagttttggttaataaattcacgttcttcctaccagaccttaTGAATTAAACTATCCGTTTGATATAATATAAACTCTCTGCAAGCAGCGAGAGCCTCCGCATCGGCGTTGGG-- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120927842 130 + 123690457 aaagcagctactttaagtagaaatctggctgcttccccttcactag-tttggttaataaattcactttcttcttaccagaccttatgaattaaa-------------------------ctcggtaagcagcgagagcctctgcatctgcgttGGG-- i nomLeu3.chr11 I 305 C 0 s rheMac3.chrUn_JH291127 84105 132 + 111706 aaagcagctactttaagtagaaatctggctgcttcctctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgtg-gcctctgcatctgtgctGGGTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 115149 132 + 192460366 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GGCTCTGCATCTGTGTTGGGTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112284 132 - 187378091 AAAGCAGCTACTTTAAGTAGAAATCTGGCTGCTTCCCCTTTGCTAGTTTTGGTTAATACATTCACTTTCTTCCTACCAGACCTCGTGGATTAAA-------------------------CTCTGCAGGCAGCGTG-GCCTCTGCATCTGTGTTGGGTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 464640 132 - 91754291 aaagcagctactttaagtagaaatctggctgcttcccctttgctagttttggttaatacattcactttcttcctaccagacctcgtggattaaa-------------------------ctctgcaggcagcgTG-GCCTCTGCATCTGTGTTGGGTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 974507 113 - 74750902 aaagctgctactttcagtagaaatctggctgcttcacctttagtggttttggttaacaaattcgcctgcttcctaccggaccttgttaattaaa-------------------------ctccgGA----------GTTTAATTAACT---------- i calJac3.chr17 C 0 C 0 e mm10.chr16 65461757 2469 - 98207768 I e canFam3.chr33 29103778 7 + 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=542556.000000 s hg38.chr3_KI270935v1_alt 173340 273 + 197351 TCGAGTGACTGAGGGTCAGCTGAC-TTGTGATGAAC--------ACA-CCAGGGAGGTGGGGCTTC-TTTTTACTTCTCTCG-TAGGCACGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATgttcatgtg-gtgctttatagcttatctt-gttaatagcggccccatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagaccgagtgatattatatgccttggaagtagcagggccgggggct- s panTro4.chr3 199810707 273 + 202329955 TCGAGTGACTGAGGGTCAGCTGAC-TTGTGATGAAC--------AGA-CCAGGGAGGTGGGGCTTC-TTTTTACTTCTCTCG-TAGACACGTTATGACTCTATGAATAATACAAATGTTCACAGCTCATgtttgtgtg-gtgctttatagcttatctt-gttaatagcggccccatttcacaggcggggaaatcgagattcagcggccccatttcacaggcagggaaattgagatttgaagagactgagtgatattatatgccttggaagtagcagggccgggggct- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120927972 274 + 123690457 TCGAGTTACTGAGGGTCAGCTGAC-TTGTGATGAAC--------AGA-CCAGGGAGGTGGGACTTCTTTTTTACTTCTCTCG-TAGGCACATTATGACTCTATGAATAATACAAATGTTCACAGCTCATGTTCATGTg-gggctttatagcttatctt-gttaatagcagccccatttcacaggtggggaaatcgagattcagCGGccccatttcacaggcggggaaatcgagattcgaagagatcgagcgatattatatgccttggaagtagcagggctgggggct- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84237 238 + 111706 TCGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAGGGAGGCAGGACTTC-TCCTTCCTTTTCTCG-TGAGCACATTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-gttaa------------------------------------cagcggccgcatttcacaggtgaggaaatcgagatttgaagagactgagtgatattacatgccttggaagtggcagggccgggggct- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 115281 238 + 192460366 TCGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAGGGAAGCAGGACTTC-TCCTTCCTTTTCTCG-TGGGCACATTATGACTCCATGAATAATACAGATGTTCATAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-gttaa------------------------------------cagcggccgcatttcacaggtgaggaaatcgagatttgaagagactgagtgatattacatgccttggaagtggcagggccgggggct- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112416 235 - 187378091 TCGAGTTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAGGGAAGCaggactt----cttccttttctcg-TGGGCACATTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCATGTTCGTGCTTTACAGCTCATCTT-GTTAA------------------------------------CAGCGGCcgcatttcacaggtgaggaaatcGAGATTTGAAGAGACTGAGTGATATTACATGCCTTGGAAGTGGCAGGGCCGGGGGCT- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 464772 238 - 91754291 TCGAATTACTGGGGGTCAGCTGAC-TTGTGATGAGC--------AGA-CCAGGGAAGCAGGACTTC-TTCTTCCTTTTCTTG-TGGGCACATTATGACTCCATGAATAATACAGATGTTCACAGCTCGTGCTCGTGTTCGTGctttacagctcatctt-gttaa------------------------------------cagcggccgcatttcacaggtgaggaaattgagatttgaagagactgagtgatattacatgccttggaagtggcagggccgggcgct- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 974620 234 - 74750902 CCAAGTTGCT----GTCAACTGACTTTGAGATGAAC--------AGACCCAGAGACGCGGGATTCCTTTTCTACTTCCCTCC-TAGGCACACTGTGACTCTATGAATAATAAAAATCTTCATGGCT-ATGTTCGTATG-GTGctttacagcttatctt-gttaa------------------------------------tagt-gtctcatttcacaggtgaggaaatagagatttgaagagtccgagtgatactatacaccttggaagtagcggggctgggGGCT- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29103785 246 + 31377067 TTGAGTTCTTGAGTGTCAACTGAC-TTGTGGCTAACTTGTCCATACA-GTTGGGAATAGGGATTTCTTTTGTACTTGTCTCACTAGGTACATTTTGACTCTATAAATAATAAAAATGTTGATGCCAAATATTTGTATT-GTGCTTTATCGCTCCTTTTAGTTAA------------------------------------TAG-GAccccatttcacaagagaggaaactgagacttggagaggctgagtgac-ttgcatgccttgtaagtggcaaggc-agaggctc i canFam3.chr33 I 7 C 0 e mm10.chr16 65461757 2469 - 98207768 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=384533.000000 s hg38.chr3_KI270935v1_alt 173613 184 + 197351 cgGGGTAAGAGCCATTGCTCGGAAGCTGCGAGC---TGCTCAGCTCTGGGACTGCCACCGAG--------------------TGGAT------------------GGAGAGCTGAGGCAA-AGATGGAGAAATGGTCACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG s panTro4.chr3 199810980 184 + 202329955 cgGGGTAAGAGCCATTGCTCAGAAGCTGCGAGC---TGCTCAGCTCTGGGACTGCCACCGAG--------------------TGGAT------------------GGAGAGCTGAGGCAA-AGATGGAGAAATGGTCACTGACCTGCCCCAAGTTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCCGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120928246 184 + 123690457 cgGGGTAAGAGCCATTGCTCGGAAGCTGCAAGC---TGCTCAGCTCTGGGACTGCCACCGAG--------------------TGGAT------------------GGAGAGCTGAGGCAA-AGATGGAGAAATGGTCACTGACCTGCCCCAAATTCTTGGACTGCCACATGCAGAGGGCTCTGAGCCTGAGGCTGAGCCAGGCACATTCTC-GGGGTGGACGCTGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84475 149 + 111706 cggggcaagagctgctgctcggaagcTGCGAGC---TGCTCAGGTCTGGGACTACCACCGAG--------------------TGGGT------------------GGAGAGCTGAGG------------------------------------TTCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACGCGGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 115519 149 + 192460366 cggggcaagagctgctgctcggaagcTGCGAGC---TGCTCAGGTCTGGGACTGCCACCGAG--------------------TGGGT------------------GGAGGGCTGAGG------------------------------------TTCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACGCGGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112651 184 - 187378091 CGGGGCAAGAGCTGCTGCTCGGAAGCTGCGAGC---TGCTCAGGTCTGGGACTGCCACCGAG--------------------TGGGT------------------GGAGAGCTGAGGCAA-GGATGGGGAAACGGTCACTGACCTGCCCCAGATGCTTGGACTGCCATGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGACACGGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 465010 184 - 91754291 cgGGGCAAGAGCGGCTGCTCGGAAGCTGCGAGC---TGCTCAGCTCTGGGACTGCCATCGAG--------------------TGGGT------------------GGAGAGCTGAGGCAA-GGATGGGGAAACGGTCACTGACCTGCCCCAGATTCTTGGACTGCCACGTGCAGAGGTCTCTGAGCCTGAGGCTGAGCCAGGCTCATTCTT-GGGATGGATGCGGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 974854 160 - 74750902 TGAGGTAAGAGCCTCGGCTCTGAGGCTGCGAGC---TG---------------------------------------------GGAT------------------GGAGAGCTGAGGCAA-CAGTGGTGAGATAGTGACTGACCCACCCCAAATTCTTGGACTGCCGCCTGCAGAGGGATCCCAGCCTAAGGCCAGGTCAGGCACATTCTCGGGGGTGAATGCTGTG i calJac3.chr17 C 0 I 312 s mm10.chr16 65464226 179 - 98207768 CAAAGCAAGGCACAAGGCTCAGAGGATGCACGCTTGTGCTCGGCTCTAGGACTGCCATCTGG--------------------AGTGT------------------GGAA---TGGGG-------GTGAGCTATGACAGTTGGCCTGCCCCAGGTTCTTGAGCTGCTGTGTTGATGAGGAGCTGAGCCTGGGGACAAGCCAGGTGCGTGTTTAGGAGCAGAGAATGTG i mm10.chr16 I 2469 C 0 s canFam3.chr33 29104031 225 + 31377067 aaaGGTAAGAGTCAAGGCTGGGAAACTGTGAGCTATTGTTGAGCAGCAGGACTGTCACCGAGGGCACGGCCTCTCCACAGTTTGGGCTCTTCTAACCCTTCTTCAGGAGAGCTGAAGTAAGGGATGGAGAAAAGATGACTGCCCTGCCCTGAGTCCTTAGTCT-CCTTAAGCAGAGTGGTCTGAGCCCTGGGGGAATTCA-GCACATTTTCAGGGGCAAGTGATGTG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199797169 30000 + 202140232 M a score=833140.000000 s hg38.chr3_KI270935v1_alt 173797 329 + 197351 ACACTGGGGTGTTTTTG-CAATGTTCCTGGTGTCT-CTTTTCTGGGATGATGTTAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAGAAGACACACGTGTGTCATTGAGTAAAACGGATAGTTTTTAAGACATTCTCTC--AGAGGAAGAGTCTCCATCCAGGGACGAGGAGGGCACTGGCGTTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTTGAAGGCTCTGTCAAGCCTCT--GCCATCACGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG s panTro4.chr3 199811164 329 + 202329955 ACACTGGGGTGTTTTTG-CAATGTTCCTGGTGTCT-CTTTTCTGGGATGATGTCAGAGTGAG-T-GTGAAGGCTGTTGACACCTTAAGGTGACAAGATCACTGTGAGAAGACACACGTGTGTCATTGAGTAAAACGGATAGTTTTCAAGACATTCTCTC--AGAGGATGAGGCTCCATCCAGGGACGAGGAGGGCACTGGCGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGGCTCCGTCAAGCCTCT--GCCATCACGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACCACGTCAGGTGGGAGACG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120928430 329 + 123690457 ACACTGGGGTGTTTTTG-CAATGTTCCTGGTGTCT-CTTTTCTGGGATGATGTTAGAGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGATCACTGTGAGAAGACACATGTGTGTCATTGAGTAAAATGGATAGTTTTTAAGACATTCTGTC--AGAGGAGGAGGCTCCATCCAGGGACTAGGAGGGCACTGGCGTTGGCACTGAGGTAGACACGTTCCCCACATCTGAGTCCTCGAAGCCTCTGTCAAGCCTCT--GCCATCGTGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACCATGTCAGGTGGGAGACA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84624 330 + 111706 ACGCTGGGGTATTTTTGCCAATGTTCCTGGCGTCT-CTTTTCTGGGATGATGTTAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAGAAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAAGCCTCT--GCCATCACGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGATG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 115668 330 + 192460366 ACGCTGGGGTATTTTTGCCAATGTTCCTGGCGTCT-CTTTTCTGGGATGATGTTAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAGAAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAAGCCTCT--GCCATCACGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGACG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112835 330 - 187378091 ACGCTGGGGTCTTTTTGCCAATGTTCCTGGTGTCT-CTTTTCCGGGAAGATGTTAGGGTGAG-T-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAGAAGACACACGTGTGTCATCGAGTGAAATGGAGAGTTTTAATGACATTCTCTC--AGAGGAGGAGGCTCCATCCAGGGACAAGGAGGGCACTGGAGCTGGCACTGAGGTACAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCTGTCAAGCCTCT--GCCATCACGTCAGCCAAAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACTGCCCCAGGTGGGAGACG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 465194 330 - 91754291 ACGCTGGGGTATTTTTGCCAAAGTTCCTGGCGCCT-CTTTTCTGGGATGATGTTAGGGTGAG-T-ATGAAGGCTGTTGACCCCTTAAGGTGACAAGGTCACTGTGAGAAGACACACGTGCGTCACCGAGTGAAATGGAGAGTTTTTAAGACATTCTCTC--AGAGGAGGAGGCTCCACCCAGGGACAAGGAGGGCACTGGAGCTGGTACTGAGGCAGAGACGTTCCCCACATCTGAGTCCTCGAAGCCTCCGTCAAGCCTCT--GCCATCACGTCAGCCAGAGATCTCCCATCAAGGTAGTTCTTTTCTCTCCTTGAACTGCCTCAGGTGGGAGACG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 975326 326 - 74750902 ACACTGGGATATTCTTGCCAGTGTTCCTGGTTTAT-CCTTT-TGGGATGATGTCAGAGAGAGCT-GTGAAGGCTGTTGACCCCTTAAGGTGACAAGATCACTGTGAGAAGACACA-GTGTGACACAGAGTGAAATGGATAGTTTTTAAGATGTTC-CTC--AGAGGAGGAGGCTCCATCCAGGGATGAGGAGAGCGCTGGAGCTGGCACTGAGGTAGAGACAGTCCTCGAACCTGAGTCCTCGAGCTCTCCATCGAGACTCG--GCC-TCACGTCAGCCAGAGACCTCCCATCATGGTTGTTATTTTCTCTCC-CGAACCGAGTCAGGCAGGAGATG i calJac3.chr17 I 312 I 366 s mm10.chr16 65464405 265 - 98207768 GCAACAGGACATTTCTA-----TTTCCTGGC-TCT-TCTCTCTCTGATGA--TCAGTGTGAG-TAGTGA--GTTGTTGCACTCTCGGAGTGGCAAAACCACTGTCCGATGGTCCACGTGGGACA--GTCTAAAACAGAAAAACTTCCAA--GTTCTAAG--AGAGGA-GAAGCGTCACACAGGGATA------GCAACGCCTTTGGTTCTGAGGTGGGGCTGAGCCTTGTAGCTGTGTCCTGGAGACCTCAGTACACGCTCT--GCC--TACTCTGGC---------CTCAACAAAG--------------CCATGG-------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104256 320 + 31377067 ACACCAGGTTATTTCTGCCAATTTTCCTAGTATCTCCTTTTCTGTGATGATGTCA--GTGAGTT-ACAATGGTTGTTGACCCCTTGGGGTGATAAAACTACTGTCAGAAGACCCAAGTGTGATATAGCCTAAGATGGATAGTTCAAAAGAAGCTCCCTCAGAGAGGAGGAGCCTGCATCAGGAGCCAGTGAGAGCACCAGGGCCGGTA-TGAGGTAGGG-CATTCCTCAC-TTGGAGTCCTGGAACCCTCCA-CGGGTTTCTTGGCTACCACTGCAGGGAGAGAGCTCTCAGCAAAGCAGCTAT----------TAAACTGCGTCTGGTGGGAGGTA i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1085795.000000 s hg38.chr3_KI270935v1_alt 174126 431 + 197351 ----GCCCACAGCTGCCTCACGTCTGTTAGGGCTCCA--GGATGTGAAGGCCG--A--GTGGCAGTAGGCATCGTTTTCCCCAGAT-------GGCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGCTGGCAGAAG-ACAG-ATTCCAAGAAGG-GTGAAGCCACTCCCTGAAGACACA-CAAAGCCTGCGGCTT---TCTAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCGTAAGCCGTATCG-CCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA s panTro4.chr3 199811493 431 + 202329955 ----GCCCACAGCTGCCTCACGTCTGTTAGGGCTCCA--GGATGTGAAGGCCG--A--CTGGCAGTAGGCATCGTTTTCCCCAGAT-------GGCCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGCCTCGGGAGAAGGAGTGGCAGCAGTATGAGTGACGATGGCAGAAG-ACAG-ATTCCAAGAAGG-GTGAAGCCACTCCCTGAAGACACA-CAAAGCCTGCGGCTT---TCTAAGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCATAAGCCGTATCA-CCACAGT--GTTTCACTTTCCTGGAGGGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAGCGGTAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120928759 420 + 123690457 ----GCCCGCAG-----------CTGTTAGGGCTCCA-GGGATGTGAAGGCTG--A--GTGGCAGTAGGCATCGTTTTCCCCAGGT-------GGCCCCTCTGCTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCTGGAGAAGGAGTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACAG-GTTCCAAGAAGG-GTGAAGCCAATCCCTGAAGAAACA-CAAAGCCTGCGGCTT---TCT-AGTGCTGTGGGTTGAGGCTTATTCCTAGCATCTGGTCTGTTTGTCTTGGGTTTT--TCCTGGAACTGGAGGTGAGGAACCCGTAAGCCATATGG-CCACAGT--GTTTCTCTTTCCTGGAGCGGAATTACTTCCTGACGGGTGGGGCCCCTTGCCAGGCTGCCTCGGGCAGGGCAGTGTGAGCCCAAGGGAAGTGCCCAACGGTGA i nomLeu3.chr11 C 0 I 258 s rheMac3.chrUn_JH291127 84954 434 + 111706 ----CCCCGAAGCGGCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTG--A--GTGGCAGTC-GCATGGTTTTCCCCAGGTTTTCCCCAGTCCCTCTGGTGATTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACAG-ATTCCAAGACGG-GTGAAGCCACTCCCTGAAGAAACAGCAAAGCCTGCGGCGT---TCTAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCCTCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCACATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 115998 434 + 192460366 ----CCCCGCAGCGCCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTG--A--GTGGCAGTC-GCATGGTTTTCCCCAGGTTCTCCCCAGTCCCTCTGGTGATTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACAG-ATTCCAAGACGG-GTGAAGCCACTCCCTGAAGAAACAGCAAAGCCTGCGGCGT---TCTAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCACATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCCGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113165 423 - 187378091 ----CCCCGCAGCGGCCTCGCGTCTTTTAGGGCTCCA-GGAACGTGAAGGCTG--A--GTGGCAGTA-GCATGGTTT-----------TCCCCAGTCCCTCTGGTGACTCCACAGGTGTCCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGACTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACAG-ATTCCAAGACGG-GTGAAGCCACTCCCTGAAGAAACAACAAAGCCTACGGCGT---TCTAAGTGCTGTGGCTTGAGGCTTGTTCCTAGCGTCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCAAAAGCCATATCGCCCACAGG--GTTTCACTTTCCT-----GGCATTACTTCCTGCCTGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGAGCAGTGTAAGCCCAAGGGCAGTGCCCAACGGTAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 465524 427 - 91754291 ----CCCCCCAGCGGCCTCGCGTCTTTTAGGGTTCCA-GGAACGTGAAGGCTG--A--GTGGCAGTA-GCATGGTTTTCCCCAGGT-------GGTCCCTCTGGTGACTCCACAGGTGTGCCGAGGTGACAGGTGTGCTGTTGGCTCGGGAGAAGGGCTGGCAGCAGCATGAGTGACGATGGCGGAAG-ACAG-ATTCCAAGACCG-GTGAAGCCACTCCCTGAAGAAACAACAAAGCCTGCGGCGT---TCTAAGTGCTGTGGCCTGAGGCTTGTTCCTAGCATCTGGTCTGTTTGCCTTGGGTTTT--TCCTGGAACCGGAGGTGAGGAACCCATAAGCCATATCGCCCACAGT--GTTTCACTTTCCT-----GGCATTACTTCCTGCCTGGTGGGGCCCC-TGCCAGGCTGCCTCAGGCAGGGCAGTGTAAGCCCAAGGGAAGTGCCCAACGGTAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 976018 419 - 74750902 ----GTCCCCAGCTG-CTCACGTCTCTTAGGGCTCCA-GGGATGTCAAGGATG--A--CTGACAGCAGGCATGGTTTTCCCCAGGT--------GGCCCTCTGGTGACTCCGCAGGTGTGACAAGGTGACAGGTGTGCTGCTGGCTTGGGAGAAGGAGTGGTGGCAGCATGAGTGGTGATGGCGG--G-ACAC-ATTCCAAGATGG-GTGACGGCACTCCCTGAGGAAACCACGAAGCCTGCGGCTT---TGCGTGCG-TGTGGGCTGAGGTCTGTTCCTGGCATCTGGTCTGTTTATTTTGAGTTTT--TCCTGGAACGGGGGGTGAGGGACCCATCGACTGTATTGCCCACAGT--GTTCCACTTTCCT-----GGCATTACTCCCTGGCTGCTGGGGCCCCTTGCCTGGCCGCCTC-----GGGCAGTGTAAGCCCAAGGGAGGCGCCCAACCATAA i calJac3.chr17 I 366 C 0 s mm10.chr16 65464670 423 - 98207768 ----CCCCCCAGCTGTGTGGTGCCTCTCAGGGTTCCA-GGGATGGTGAGGTTGAAA--GTGAAAATGGTCATCACTCTTCTCAG---------TGGCCCTCTGGTGACTCTACAGTCATGAGAAGGTGATGGGTGTGCTGTTGATTC---AGGGGGAGTGGTGGCAGCAGGGGTGTAGAGGACAGAAGAATAC-ATTCC-AGTGGG-GTGGAGTGTCACACCACAGAGAGA-AAATGTGCTTCACCT---GGCATGCTCTGTGGGCTGAGGCTGCGTCTTAGCACCTTCTCTGTTTGTTTTGGGTTTTTCTCCTGGATCTAGAGGTGACAACCCCATAAACCAAATTTCCCACAATCCCCCTCACTTCCTC-----AATGCTCTTTCTTGGCTGGCGATCTCTT-TGCAGGGTTGCCTGGGAGAGAGTAG----AGTCCAAGCAGAGAACCCAACGGTA- i mm10.chr16 C 0 C 0 s canFam3.chr33 29104576 424 + 31377067 CCTAGCCCTCGTCTGAGTC----CTCTCAGGACTGCAGGGAAGGCAGAGGTTG--ATGGTGTTGATAGAAACTGTTTCTG-------------TGGCCCTCTGGTTACTCCACAGGTATGAGGAGGTGGTGGGCGTGTTGTTGACTCAGCTGAAGGAGTGGTGGCCGCAGTGGTGATGCTGATGGAAG-ATAACATTCCCACACCATGGTAAATCACTCCTTAAAGAGAAA-CAAAGCCTATGTCTTACATGTGTGCATTGTGGGCAGAAGTTTATTCTTAGTGCCTGCTCTGTTTGTCTTAAGTTAT--TCCTGGAACTGGAGGTGAGGAACCCATGAGCCATATCACCCACAAA--GTTTCACTTTTCT-----GCTGTTATTTCCTGATTGGTGGGACTC--TGCCAGGCTGTGCCTG---GGGCCGTGTAGAGCTAAG-GAAGCACTCAACTGTGA i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199797169 30000 + 202140232 M a score=73258.000000 s hg38.chr3_KI270935v1_alt 174557 43 + 197351 GGATGGCCTTGAGGAGAACATTCAGCCCCACACAGGCAGCAGG s panTro4.chr3 199811924 43 + 202329955 GGATGGCCTTGAGGAGAACATTCACTCCCACACAGGCAGCAGG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 85388 43 + 111706 GGATGGCCTTGAGGAGAACATTCGCCCACACACAGGCGGCAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116432 43 + 192460366 GGATGGCCTTGAGGAGAACATTCGCCCACACACAGGCAGCAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113588 43 - 187378091 GGATGGCCTTGAGGAGAACATTCGCCCGCACACAGGCGGCAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 465951 43 - 91754291 GGATGACCTTGAGGAGAACATTCGCCCGCACACAGGCGGCAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 976437 41 - 74750902 AGATGGCCTTGAGGAGAACACTC-CCCCTACCCGGGCCGTGG- i calJac3.chr17 C 0 C 0 s mm10.chr16 65465093 19 - 98207768 -----------------GCATTTTTTT-------AGCAGTAAA i mm10.chr16 C 0 C 0 s canFam3.chr33 29105000 43 + 31377067 GGATAGCCTTGAAGAGAAAATTGACTCATGAATGGGCAGCAGG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120929179 258 + 123690457 I a score=50153.000000 s hg38.chr3_KI270935v1_alt 174600 25 + 197351 CGGCCCGGAA---------------GGCGCGCAGACGCTG s panTro4.chr3 199811967 25 + 202329955 CAGCCCGGAA---------------GACGTGCAGACACTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929437 25 + 123690457 CGGCCCGGAA---------------GGCGCGCAGATGCTG i nomLeu3.chr11 I 258 C 0 s rheMac3.chrUn_JH291127 85431 25 + 111706 CGGCCGGGAA---------------GGCGTGCAGACGCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116475 25 + 192460366 CGGCCGGGAA---------------GGTGTGCAGACGCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113631 25 - 187378091 CGGCCTGGAA---------------GGCGTGCAGACGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 465994 25 - 91754291 CAGCCTGGAA---------------GGCCTGCAGACGCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 976478 24 - 74750902 CCATCCGG-A---------------GGTGTGCAGACACTG i calJac3.chr17 C 0 I 27 s mm10.chr16 65465112 25 - 98207768 TGAGTTGGAA---------------AGTGTATAGAAGTTG i mm10.chr16 C 0 I 7 s canFam3.chr33 29105043 40 + 31377067 TGCCCTGAAAGCTAATAAAGAGATCGGCAGAGAGAGGCAG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199797169 30000 + 202140232 M a score=145383.000000 s hg38.chr3_KI270935v1_alt 174625 85 + 197351 AACCGCTGGC----CCCACCGCCTTTGGCAGGGAGCTAATGCTATTTGTG----TATCAG-CCCAGAAT-----CAACTGTGACCAGGGTTGTGTCCAC------- s panTro4.chr3 199811992 85 + 202329955 AACCGCTGGC----CCCACCGCCTTTGGCAGGGAGCTAATGCTATTTGTG----TATCAG-CCCAGAAT-----CAACTGTGACCAGGGTTGTGTCCAC------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929462 85 + 123690457 AACC-CCGGC----CCCACCGCCTTTGACGGGGAGCTAATGCTATTTGTG----TATCAGCCCCAGAAT-----CGACTGTGACCAGCGTTGTGTCCAC------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85456 86 + 111706 AACTGCCGGC----CCCACCGCCCTTGGTGGGGAGCTAATGCTATCTGTG----TATGACCCCCAGAAT-----CAACTGTGACCAGCGTTGTGACCAC------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116500 86 + 192460366 AACCGCCGGC----CCCACCGCCCTTGGTGGGGAGCTAATGCTATCTGTG----TATCAGCCCCAGAAT-----CAACTGTGACCAGCGTTGTGACCAC------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113656 90 - 187378091 AACTGCCGGCCCCACCCACCGCCCTTGGTGGGGAGCTAATGCTATCTGTG----TATCAGCCCCAGAAT-----CAACTGTGACCAGCGTTGTGACCAC------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466019 86 - 91754291 AACCGCCGGC----CCCACCGCCCTTGGTGGGGAGCTAATGCCATCTGTG----TATCAGCCCCAGAAT-----CAACTGTGACCAGCGTTGTGACCAC------- i chlSab2.chr15 C 0 C 0 s mm10.chr16 65465144 66 - 98207768 GAGGGCCAGC----CTT-CCACCCT----------------CTGTGTGCA----TATCAG-CCTTGAAT-----AGAC--TGACGGGTATTGCATGCAC------- i mm10.chr16 I 7 I 5 s canFam3.chr33 29105083 102 + 31377067 GACCCCCTGC----CTGGCCTCCCTGTTTGGGAGCCAAGAGCCATCTGTACCTCTGTCAGCCGCAGCATAGGCACAGCTCTTATCCTCATGGTGGTAACTGGGCTT i canFam3.chr33 C 0 C 0 e calJac3.chr17 976502 27 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M a score=5879.000000 s hg38.chr3_KI270935v1_alt 174710 15 + 197351 TGGGTA-CTTC----------CCTAG s panTro4.chr3 199812077 15 + 202329955 TGGGTA-CTTC----------CCTAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929547 16 + 123690457 TGGGTATTTTC----------CCTAG i nomLeu3.chr11 C 0 C 0 s mm10.chr16 65465215 25 - 98207768 TGTGTC-TTTCTTTTATCTGTCCTAG i mm10.chr16 I 5 C 0 s canFam3.chr33 29105185 15 + 31377067 TGGGTA-CTCC----------CTCAG i canFam3.chr33 C 0 I 1884 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e calJac3.chr17 976502 27 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=49786.000000 s hg38.chr3_KI270935v1_alt 174725 181 + 197351 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCCTTGGAATAACAGACCTCTtgtgatctccagcgcctgaaacgagacttg--gcatacagcagtgacttcgtacacatctgtggaata----------------------------------------------------------------------------------------catCCCAGGCCCTGTGGCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTTGC s panTro4.chr3 199812092 269 + 202329955 AATTCAAGATGAGGAAAGACACTAACTCAAGATACCTTTGGAATAACTGACctcttgtgatctccagagcctgaaacgagacttg--gcatacagcagtgacttcatacacatctgtggaatACAGGGGCTCCTGCGatctccagcgcctgagacgagacctggcatacagcagtgacttcatacacatctgtggaatACAGGGGCTCCTGCATCCCAGGCCCTGTGGCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGTGACGTTGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929563 193 + 123690457 GATTCAAGATGAGGAAAGACACTAACTCAAGATGCCCTTGGAATAACTGACctcttgtgatctccagcgcctgaaacgagacctg--gcatacagcaatgccttcataaacatctgtggaata----------------------------------------------------------------------------caggaGCTCCTGCGTCCCAGGCCCTGTGGCCTTTGTTGCCTTCAGCCGAGGCTGGAGAGAGGGCGACGTTGC i nomLeu3.chr11 C 0 C 0 s mm10.chr16 65465240 158 - 98207768 AATTCAAGACAAGGAAGGAGACTAAATCGAAATACTCGAG-------------------------AGAGTCTGGCAGATCACCTGGAGCAGACTAGAATGACATCATCGACATCTTTTGCACG----------------------------------------------------------------------------CA----------CTCCCCAGGCCCTA-GCCTTTTAGTTCTGTCAG-TGAGGTTGGAGGGAGAATGAGGTGGC i mm10.chr16 C 0 I 2011 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e canFam3.chr33 29105200 1884 + 31377067 I e calJac3.chr17 976502 27 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=30087.000000 s hg38.chr3_KI270935v1_alt 174906 116 + 197351 CTGtttctttatctttatc---ttttttttttttgagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT s panTro4.chr3 199812361 119 + 202329955 CTGTttctttatctttatctttttttttttttttgagatggagtctcgctctgtcgcccaggcaggagtgcagtggtgcgatctcagctcactgtaacctccacctcccaggttcaagT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929756 118 + 123690457 CTGtttctttatctttatc-ttttttttttttttgagatggagtcttgctctgtcgcccagacaggagtgcagtggggtgatctcagcacactgtaacctccgcctcccaggttcaagT i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 29105200 1884 + 31377067 I e calJac3.chr17 976502 27 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=29121.000000 s hg38.chr3_KI270935v1_alt 175022 74 + 197351 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCCGTTCTTTCCAACGATCCCCGCCGAAGTCACACCCCAAC---------------------------- s panTro4.chr3 199812480 74 + 202329955 CCCTTCACAGTGGACTCCAAGGCGAGAACTTTACCTGTTCTTTCCAACGATCCCCGCCAAAGTCACACCCCAAC---------------------------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929874 74 + 123690457 CCCTTCACAGTGGACTCCAAGGCAAGAACTTTATCGGTTCTTTCCAACGATCCCCACCGAAGTCACACCCCAAC---------------------------- i nomLeu3.chr11 C 0 I 27 s canFam3.chr33 2270819 102 - 31377067 CCCTTCACAGTTGGCTCCAAGACAAGAACTTTATCTTTTCCTTCTGACTATACCCATCGAAGTCACATTACAAACAATACCTATCAACTAGGTGTCACTTCA i canFam3.chr33 n 1884 C 0 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e calJac3.chr17 976502 27 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=170699.000000 s hg38.chr3_KI270935v1_alt 175096 302 + 197351 CCATGGATCCCACCACCGGTCATTTGACCTCATTTCTGTCAGCATCTGGTGTGGCAGCACCCAG-CCACTCTGGTGATCGCCACAGAAGCTCCAGCACCAAACCAAGAAGCACCAAAATCCGGCTGTG-----AGCACA-GCACGCCGG-CCAGCTC-AACTCTCTTTTCCCCAACGCCTCCTTCTCGGAGGTGCCATCTCCAGTCTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCCA-CTGGGGCAGGCACATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCTGCCT--CTCCACAGTG s panTro4.chr3 199812554 307 + 202329955 CCATGGATCCCACCACCGGTCATTTGACCTCATTTCTGTCAGCATCTGGTGTGGCAGCACCCAG-CCACTCTGGTGATCGCCGCAGAAGCTCCAGCACCAAAGCAAGAAGCACCAAAATCCGGCTGTGAGCACAGCACA-GCACGCCGG-CCAGCTC-AACTCTCTTTTCCCCAACGCCTCCTTCTCGGAGGTGCCATCTCCAGTCTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCCA-CTGGGGCAGGCACATCCTCCTAGCCTAGCGCTGTCCTCAGGAGCCTGGCTACCT--CTCCACAGTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120929975 303 + 123690457 CCATGGATCCCACCACCGGTCATTTGACCTCACTTCTGTCAGCGTCTGTTGTGGCAGCACCTGG-CCACCCTGGTGATCGCCGCAGAAGCTTCAGCACCAAACCTAGAAGCACCAAAATCCGGCTGTG-----AGCACA-GCACACCGGCCCAGCTC-AACTCTCTTTTCCCCAACGCCTCCTTCTCAGAGGTGCCATCTCCCGTCTCCACCATCTTGGTGTTGCCACCCATCTCT-CCTGGCTCCCA-CCAGGGCAGGCACATCCTCTTAGCCTAGGGCTGTCCTCAGGAGCCTAGCTACCC--CTCCACAGTG i nomLeu3.chr11 I 27 C 0 s calJac3.chr17 976529 299 - 74750902 CCATGGATATCCCCACAAGCCATTTGACCTCATTTCTGTCAG-ATCTGGGGTGGCAGCACCCAG-CCACTCTGGTGATTGCCACAGAAGCTCCAGCACCAAGCC-AGGAGCGCCAAAACCCGGCTCTG-----ACCACA-GCACACCAGCCCACCTC-AACTGTC-TTCCCCCAGTGCCTCCTTCTCAGAACTTCCATCTCCAGGCTCCG-CGTCTTGCTGTTGGCGCCCGTCTCT-CCTGGCTCCCGCCTGAGGCGGCCACCCCCTCCTAGCCTAGGGCTGTCCTCAGGAGCTGGGCTATCT---GCCACAGTG i calJac3.chr17 I 27 I 684 s canFam3.chr33 2270921 287 - 31377067 CCTTGGACGCCATCACAGGTCATTTGACCTAACTTCTGCCAGCATCCG-TGTAGCAGCACCAAGATTACCCTGGTGAAAATCCCAGAAGCTCCAGAACCTAGCCAAGCAGTGTCAAAATCCAGCTTCA-----ACCAGATGTTCACAAGCACAGCTCTGGCTTTCTCTTCCCCACCCCTTCCT------------CTTCTCTAGG---------CTTGGGTTTAGAGCTCATCTCTCCCTGGCTCCCCTCCGAGGCAGGCAC-CCCTCCTAGTCTAGGGTTGCCCTCAGGAATTTGGCCATCTTCTGCTACAGTT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1146.000000 s hg38.chr3_KI270935v1_alt 175398 2 + 197351 GT s panTro4.chr3 199812861 2 + 202329955 GT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120930278 2 + 123690457 GT i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2271208 2 - 31377067 GT i canFam3.chr33 C 0 n 0 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e calJac3.chr17 976828 684 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=35501.000000 s hg38.chr3_KI270935v1_alt 175400 132 + 197351 TAGCCTCGGGCTGTCCTGGTGTGGTGGTGTGTGCCTGTGATCCCAGTTGGAAtcaagtgcttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatctcctgctaatttttgtatt s panTro4.chr3 199812863 132 + 202329955 TAGCCTCGGGCTGTCCTGGTGTGGTGGTGTGTGCCTGTGATCCCAGTTGGAAtcaagcgcttctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccatcccctgctaatttttgtatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120930280 132 + 123690457 TAGCTTTGGGCTGTCTTGGTGTGGTGGCGTGTGCCTGTGATCCCAGTTGGAAtcaagcgattctcctgcctcagcctcctaaatagctgggattacaggtgcccaccaccatcccctgctaatttttgtatt i nomLeu3.chr11 C 0 M 1820 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e calJac3.chr17 976828 684 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M a score=1028.000000 s hg38.chr3_KI270935v1_alt 175532 11 + 197351 tttagtagaga s panTro4.chr3 199812995 11 + 202329955 tttagtagaga i panTro4.chr3 C 0 M 606 e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e calJac3.chr17 976828 684 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120930412 1820 + 123690457 M a score=0.000000 s hg38.chr3_KI270935v1_alt 175543 77 + 197351 cggggttttgccatgttggccagtctggtctcaaactcctgacctcaagtgatctgcccgcttcagcttcccagagt e rheMac3.chrUn_JH291127 85542 0 + 111706 C e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e calJac3.chr17 976828 684 - 74750902 I e chlSab2.chr15 466105 0 - 91754291 C e macFas5.chr2 116586 0 + 192460366 C e papAnu2.chr2 113746 0 - 187378091 C e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120930412 1820 + 123690457 M e panTro4.chr3 199813006 606 + 202329955 M a score=81209.000000 s hg38.chr3_KI270935v1_alt 175620 96 + 197351 gctgggatgacagccatgagtcactgtgcctggccTTGTCTGTCATTTCAATTACTCAAAATCCATAATCTGggccgggcgcagtggctcacactg s rheMac3.chrUn_JH291127 85542 96 + 111706 GCTGGGGTGACAGGCATGAGCCACCATGACCAGCCTTGTCTGTCATTTTAGTTACTCAAAATCCATAATCTGggtcgggcacagtggcttacaccg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116586 96 + 192460366 GCTGGGGTGACAGGCATGAGCCACCATGACCAGCCTTGTCTGTCATTTTAGTTACTCAAAATCCATAATCTGggtcgggcacagtggcttacaccg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113746 96 - 187378091 GCTGgggtgacaggcatgagccaccgtgcccggccttgtctGTCATTTTAGTTACTCAAAATCCATAATCTGggtcaggcgtagtggctcacaccg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466105 96 - 91754291 GCTGGGGTGACAGGCATGAGCCACCATGCCCGGCCTTGTCTGTCATTTTAGTTACTCAAAATCCATAATCTGggtcgggcacagtggctcacacca i chlSab2.chr15 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e calJac3.chr17 976828 684 - 74750902 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120930412 1820 + 123690457 M e panTro4.chr3 199813006 606 + 202329955 M a score=41657.000000 s hg38.chr3_KI270935v1_alt 175716 35 + 197351 gtaatcccagcactttgggaggccaaggtaagcag s rheMac3.chrUn_JH291127 85638 35 + 111706 ggaatcccagcactttgggaagccaaagtgggcag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116682 35 + 192460366 ggaatcccagcactttgggaagccaaagtgggcag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113842 35 - 187378091 ggaatcccaacactttgggaagccaaggtgggcag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466201 35 - 91754291 ggaatcccagcactttgggaggccaaggtgggcag i chlSab2.chr15 C 0 C 0 s calJac3.chr17 977512 35 - 74750902 gtaaacccagcactttgggaggctgaaatgggcag i calJac3.chr17 I 684 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e ponAbe2.chr3 199797169 30000 + 202140232 M e nomLeu3.chr11 120930412 1820 + 123690457 M e panTro4.chr3 199813006 606 + 202329955 M a score=3822.000000 s hg38.chr3_KI270935v1_alt 175751 2 + 197351 at s ponAbe2.chr3 199827205 2 + 202140232 at i ponAbe2.chr3 M 30000 C 0 s rheMac3.chrUn_JH291127 85673 2 + 111706 at i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116717 2 + 192460366 at i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113877 2 - 187378091 at i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466236 2 - 91754291 at i chlSab2.chr15 C 0 C 0 s calJac3.chr17 977547 2 - 74750902 at i calJac3.chr17 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e nomLeu3.chr11 120930412 1820 + 123690457 M e panTro4.chr3 199813006 606 + 202329955 M a score=281148.000000 s hg38.chr3_KI270935v1_alt 175753 123 + 197351 cacttgaggtcaggagttcgagactagcctgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtgatcccagctactcggggggctg s ponAbe2.chr3 199827207 123 + 202140232 cactggaggtcaggagttggagaatagcgtgaccaacatggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcatgtgcctgtaatcccagctactcgggaggctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932232 123 + 123690457 cactggaggtcaggagttggagactagcgtgaccagcagggcaaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgtctgtaatcccagctactccagaggctg i nomLeu3.chr11 M 1820 C 0 s rheMac3.chrUn_JH291127 85675 123 + 111706 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtgccgtgtgcctgtaatcccagctactcgggaggccg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116719 123 + 192460366 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113879 123 - 187378091 cacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatttctactaaaaatacaaaaatcagcagagcatggtggcgtgtgcctgtaatcccagctactcgggaggccg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466238 120 - 91754291 cacttgaggtcaggagtttgagaccaccctggccaaca---tgaaaccccatttctactaaaaatacaaaaatcagcagagcatagtggcgtgtgcctgtaatcccagctactcgggaggctg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 977549 123 - 74750902 cacttgaggtcaggagttcgagaccagcctgggcaacatggcgaaaccccatctctactaaaaatacaaaagttagcagagcatggtggtgcatgcatgtaatcccagccacttgggaggctg i calJac3.chr17 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I e panTro4.chr3 199813006 606 + 202329955 M a score=331434.000000 s hg38.chr3_KI270935v1_alt 175876 123 + 197351 aggcacgagaatcccttgaaccctggaggcagaggttgcagtgagccgagataacgccacagcacttcagcctgggtgacacagtgagactctgtctcaaaaatataaataaataaaataaca s panTro4.chr3 199813618 123 + 202329955 aggcacaagaatcccttgaaccctggaggcaaaggttgcagtgagccgagataacgccatagcacttcagcctgggtgacacagtgagactctgtctcaaaaatataaataaataaaataaca i panTro4.chr3 M 606 C 0 s ponAbe2.chr3 199827330 123 + 202140232 aggcatgataatctcttgaaccctggaggcagaggttgcagtgagccgagatcacgccactgcacttcagcctgggtgacacggtgagactctgtctcaaaaatataaataaataaaataaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932355 121 + 123690457 aggcacgagaatctcttgaaccctggaggcggaggttgcagtgagccgagatcacgccactgcactccagcctgggtgacccagtgaga--ctgtctcaaaaatataaataaataaaataaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85798 119 + 111706 aggcacaagaatctcttgaaccctggaggtggaggttgcggtgagccaagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaataaaataaca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116842 119 + 192460366 aggcacaagaatctcttgaaccctggaggtggaggttgcggtgagccaagatcacgccactgccctcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaataaaataaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114002 119 - 187378091 aggcacaagaatctcttgaaccctggaggtggaggttgcggtgagctgagatcacgtcactgcactcc--cctgggtgacacagtgaga--ctgtctcaaaaatataaataaataaaataaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466358 119 - 91754291 aggcacgagaatctcttgaaccctggaggcggaggttgcagtgagctgagatcacgccactgcactcc--cctgggtgacacagtgaga--ctgtctcaaaaatacaaataaataaaataaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 977672 117 - 74750902 aggcaggagaacctcttgaacctggaagccagaggttgcagtaagccaagatcacaccactgtactccagcctgggtgacacagtgact--ctgtctcaaaaatac----aaataaaatagaa i calJac3.chr17 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 2271210 0 - 31377067 I a score=1349116.000000 s hg38.chr3_KI270935v1_alt 175999 460 + 197351 taaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcctctgcctgctcaggcctggcaccttctccacctggctgtcctcagc----------ctcaggc-------ctcagctccccgcagaacggttcctcacagggcccttcct-gactt-gtcagt-cagatgcacctcccctactctctggccattcgaaatgcagctctcagcacaccctgtacttttccacactgcatttaccacatgtgcagttgagaacatttccgtaattatttgatgtctgtctgcac-caagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaacttaaggcaggcgtttcctaaatggt s panTro4.chr3 199813741 460 + 202329955 taaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCGATCTAacacctgcct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcctctgcctgctcaggcctggcaccttctccacctggctgtcctcagc----------ctcaggc-------ctcagctccccgcacagcggttcctcacagggcccttcct-gactt-gtcagt-cagatgcacctcccctactctctggccattcgaaatgcagctctcaggacaccctgtacttttccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-caagattttagtgccaagagactgggccacgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaacttaaggcaggcgtttcctaaatggt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827453 435 + 202140232 taaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGCGCAATCTAACATCTGCCT-TCTGTTTCAAGCCCTCCAAGGGGCCAagctctttcctgcatctccgtgagctccgcctctgcctgctcaggcctggcaccttctccacctggcagtcctcagc----------ctcaggc-------ctcagctccccacacagcagttcctcgcaggggccttcct-gactt-gtcagt-cagatgcagctcccgtactctctggctattcaaaatgcagctctcagcacaccctgtacttttccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-caagattttagtgccaagagactgggccacgtctgtttcact---------------------ctgtgtcctagaacaatgtcaggaacttaaggcag----ttcctaaatggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932476 457 + 123690457 taaaaTTCATAATCTATTCCACAGCTTGCAAAGCCCTGTGCGATCTAacacttgtct-tctctttcaagtcctccaaggggccaagctctttcctgcctctccatgagctccgcctctgcctgctcaggcctggcactttctccacctggctgtcctcagc----------ctcaggc-------ctcagctccccgcacagcagttcctcacaggggccttcct-gact---tcagt-cagatgcagctcccgtactctctggccattcgaaatgcagctcttagcacaccctgtacttttccacactgcatttaccacatgtgcagttgagaacatttctgtaattatttgatgtctgtctgcac-caagattttagtgccaagagactgggccatgtctgtttcactcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaagaacttaaggcaggcgtttcctaaatag- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85917 457 + 111706 taaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCCCCGCCTCTGCCTGCTCAGGCCTGGCACTTTC-CCACCCAGCTGTCCTCAGC----------CTCAGGC-------CTCAGCTCCCCCCAGAGCCGTTCCTCACAGGGGCCTTCCT-GACTT-GTCAGT-CAGATGCAGTTCCCGTACTCTCTGGCCATTCAAAATGCAGCTCTCAG--CACCCTGAACTTTCCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-taagattttagtgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaacttaaggcaggcgtttcctaaacggc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 116961 457 + 192460366 taaaaTTCATAATCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCTCTGCCTGCTCAGGCCTGGCACTTTC-CCACCCAGCTGTCCTCAGC----------CTCAGGC-------CTCAGCTCCCCCCAGAGCCGTTCCTCACAGGGGCCTTCCT-GACTT-GTCAGT-CAGATGCAGTTCCCGTACTCTCTGGCCATTCAAAATGCAGCTCTCAG--CACCCTGAACTTTCCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-taagattttagtgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaacttaaggcaggcgtttcctaaacggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114121 457 - 187378091 taaaattcataatCTATTCCACAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCTAAGCTCTTTCCTGCCTCTCCATGAGCTCCGCCTCTGCCTGCTCAGGCCTGGCACTTTC-CCACCCAGCTGTCCTCAGC----------CTCAGGC-------CTCAGCTCCCCCCACAGCAGTTCCTCACAGGGGCCTTCCT-GACTT-GTCAGT-CAGACGCAGTTCCTGTACTTTCTGGCCATTCAAAATGCAGCTGTCAG--CACCCTGAGCTTTCCCACCCTGCGTTTACCACATGTGCAGCTGGGAACATTTCTGTCATTATTTGATGTCTGTCTGCAC-CAAGATTTTAGCGCCAAGAGACTGGGCCACGTCTGTTTCATTCTTCACTGTGTGCATCCAGTGCTGTGTCCTAGAACAATGTCAGGAACTTAAGGCAGGCATTTCCTAAATggt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 466477 457 - 91754291 taaaaTGCATAATCTATTCCAAAGCTTGCAAAGTCCTGTGCGATCTAACACCTGCCT-TCTCTTCCAAGCCTTCCCAGGGGCCAAGCTCTTTCCTGCCTCTCCATGAGCTCCACCTCTGCCTGCTCAGGCCTGGCACTTTC-CCACCCAGCTGCCCTCAGC----------CTCAGGC-------CTCAGCTCCCCCCACAGCAGTTCCTCACAGGGGCCTTCCT-GACTT-GTCAGT-CAGTTGCAGTTCCCGTACTCTCTGGCCATTCAAAATGCAGCTCTCAG--CACCCTGAACTTTCCCACCCTGCATTTACCACATGTGCAGCTGGGAACatttctgtaattatttgatgtctgtctgcac-caagattttagcgccaagagactgggccacgtctgtttcattcttcactgtgtgcatccagtgctgtgtcctagaacaatgtcaggaacttaaggcaggcgtttcctaaatggt i chlSab2.chr15 C 0 I 237 s calJac3.chr17 977789 424 - 74750902 taaaaTCCGTAATCTATTCCACAGCTTGCAAGGCCCTGTACAATctcacacctgcct---------------------------gtctctttcctgcctctccatgtgctcctcctctgcctgctcaggcctggcgccttctccatctggctctcctcagc----------ctcaggc-------ctcactcaccgacacagcacct-ctcccagaggtcttcct-gactt-gtccatgcacatgcag-tcccctcctctgtag----tccaaatgcggcttcca---cctcctgcgcatttccacgctgcattttccacgtgtgcaggtgggaacatttctgtaattacttaatgtctgtctgccc-caggatttcagcgccgaaagactgggccacgtctgtttcattcttcactgtgcacattcagcac--tgtcccagaacaatgccagggactcaaggtaggcatttcctaaatggt i calJac3.chr17 C 0 C 0 s canFam3.chr33 29107084 426 + 31377067 taaaacccacaatccgctccatggctcac-aggtcctgcgtgctctagcccgtgcctacctctctCAGATCCTTCCA--AGTCAAGccttctcccgcccctgtgca---tcttcccctgcct------ggctggtgcttct-tcactcccctgcccccatctggcttacaactcagccttctcctctcagctcaaagaaaagcacttggt--cagaggccctcctggacttcatgatc-taaatgaggtctccctatttt------------------actcttat--cagatt--acttgttca--atgcg-ataccacatttgtagatgggaatttgtctgtaattattttatgtctttctgcgtattagatcttagctccacgaggctgggccctgtcagttccgtccctcactgtgtacacacagtgc--tgctctagaacaatgt-------------tgggcgctccttaaatagt i canFam3.chr33 I 1884 C 0 e mm10.chr16 65465398 2011 - 98207768 I a score=6615.000000 s hg38.chr3_KI270935v1_alt 176459 5 + 197351 ggttt s panTro4.chr3 199814201 5 + 202329955 ggttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827888 5 + 202140232 tgttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932933 2 + 123690457 ---tt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86374 5 + 111706 tgttT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 117418 5 + 192460366 tgttT i macFas5.chr2 C 0 I 128 s papAnu2.chr2 114578 5 - 187378091 tgttt i papAnu2.chr2 C 0 C 0 s canFam3.chr33 29107510 2 + 31377067 ---tt i canFam3.chr33 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e calJac3.chr17 978213 0 - 74750902 C e chlSab2.chr15 466934 237 - 91754291 I a score=6209.000000 s hg38.chr3_KI270935v1_alt 176464 3 + 197351 aat s panTro4.chr3 199814206 3 + 202329955 aat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827893 3 + 202140232 aat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932935 3 + 123690457 aat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86379 3 + 111706 aat i rheMac3.chrUn_JH291127 C 0 I 105 s macFas5.chr2 117551 3 + 192460366 aat i macFas5.chr2 I 128 I 1 s papAnu2.chr2 114583 3 - 187378091 aat i papAnu2.chr2 C 0 I 1 s canFam3.chr33 29107512 3 + 31377067 AAG i canFam3.chr33 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e calJac3.chr17 978213 0 - 74750902 C e chlSab2.chr15 466934 237 - 91754291 I a score=1365.000000 s hg38.chr3_KI270935v1_alt 176467 1 + 197351 t s panTro4.chr3 199814209 1 + 202329955 t i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827896 1 + 202140232 t i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932938 1 + 123690457 t i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 978213 1 - 74750902 t i calJac3.chr17 C 0 C 0 s canFam3.chr33 29107515 1 + 31377067 T i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 86382 105 + 111706 I e mm10.chr16 65465398 2011 - 98207768 I e chlSab2.chr15 466934 237 - 91754291 I e macFas5.chr2 117554 1 + 192460366 I e papAnu2.chr2 114586 1 - 187378091 I a score=8657.000000 s hg38.chr3_KI270935v1_alt 176468 4 + 197351 aaca s panTro4.chr3 199814210 4 + 202329955 aaCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827897 4 + 202140232 aaCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120932939 4 + 123690457 aacg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 117555 4 + 192460366 aatg i macFas5.chr2 I 1 C 0 s papAnu2.chr2 114587 4 - 187378091 aatg i papAnu2.chr2 I 1 I 60 s chlSab2.chr15 467171 4 - 91754291 aacg i chlSab2.chr15 I 237 C 0 s calJac3.chr17 978214 4 - 74750902 aata i calJac3.chr17 C 0 I 8 s canFam3.chr33 29107516 4 + 31377067 AACA i canFam3.chr33 C 0 I 36 e rheMac3.chrUn_JH291127 86382 105 + 111706 I e mm10.chr16 65465398 2011 - 98207768 I a score=393228.000000 s hg38.chr3_KI270935v1_alt 176472 124 + 197351 aatGAATGAATGAATG----------------GCTGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCGTCGGTGGGCTGGGCTGGTTTGGAGATTGCCGAAAGGCTGTGTGCTGCAGT------------------gagtcaggagacctg s panTro4.chr3 199814214 136 + 202329955 aatgaatgaatgaatg----aatgaatgaatgGCTGTCTCAGCAGGGCGTGTGAATGCTTCTGTTCTTCCCTCCATCGGTGGGTTGGGCTGGTTTGGAGATTGCCGAAAGGCTGTGTGCTGCAGT------------------gagtcaggagacctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199827901 132 + 202140232 aatgaatgaatgaatg--------aatgaatgGCGGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGACTGCCGAAAGGCTGTGTGCTGCAGT------------------gggtcaggagacctg i ponAbe2.chr3 C 0 I 228 s nomLeu3.chr11 120932943 136 + 123690457 aatgaatgaataaatg----aatgaatgaatgGCTGTCTCAGCAGGGTGTGTGAATGCTTCTGTTCTTCCCTCCATCGGTGGGCTGGGCTGGTTTGGAGATTGCCAAAAGGTTGTGTGCTGCAGT------------------gagtcaggagacctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86487 124 + 111706 aatgaatgaatgaatg----------------aCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGATTGCTGACAGGCTCCGTGCTGCAGT------------------gaggcaggagacctg i rheMac3.chrUn_JH291127 I 105 C 0 s macFas5.chr2 117559 124 + 192460366 aatgaatgaatgaatg----------------GCTGTCTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGATTGCTGACAGGCTCCGTGCTGCAGT------------------gaggcaggagacctg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114651 123 - 187378091 aatgaatgaatgaatg----------------gctgtcTCAGCAGCGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGA-TGCTGAAAGGCTCCGTGCTGCAGT------------------GAGGCAGGAGACCTG i papAnu2.chr2 I 60 C 0 s chlSab2.chr15 467175 123 - 91754291 aatgaatgaatgaatg----------------GCTGTCTCCGCAGTGTGTGTGAATGCTTCTGTTCTTCCCTCCATTGGTGGGCTGGGCTGGTTTGGAGA-TGCTGAAAGGCTCCGTGCTGCAGT------------------gaggcaggagacctg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 978226 140 - 74750902 aatGAATGCATGAGTGACGGAATGAATGAATGACTGTCTCAGCAGGGTGTGTGAGTGCTTCTGTTCTTCCCTCCACTGGTGGGCTGGGCTGGTTTGGAGATTGCTGGAAGGTTGTgtgctgcact------------------gagtcaggagacctg i calJac3.chr17 I 8 C 0 s canFam3.chr33 29107556 131 + 31377067 aatggatggatgaatg----------------aatATCTCAACAGGGT-TGCAAGCGCTTCTATTCCTCC--TCATTGATGGGCTGTGCTGGTATG--------TAAACAGTTTtgtaatgtggtgcaaacccagtaaatgaggagtcaggaaatttg i canFam3.chr33 I 36 C 0 e mm10.chr16 65465398 2011 - 98207768 I a score=804069.000000 s hg38.chr3_KI270935v1_alt 176596 243 + 197351 ggttctagtcccagctgcctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtgAATGAACAACTCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCTGGGCGGGGCGG s panTro4.chr3 199814350 243 + 202329955 ggttctagtcccagctgcctcacttatgggttctatgatcttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgcattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtgAATGAACAACTCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCCACTGGACTTTTGGAACCTAAAC-----TGCAACCTGGGTGGGGCGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199828261 243 + 202140232 ggttctagtcccagctgcctcacttatgggttctatgaccttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgtgttcatcttcctgtccagagcagctggcatgagtaggaattctgcaagtgAATGAACAACTCCAAAGTCTAGGCTGTTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCTAAAC-----TGCAACCTGGGCGGGGCGG i ponAbe2.chr3 I 228 C 0 s nomLeu3.chr11 120933079 243 + 123690457 ggttctagtcccagctgcctcacttatgggttctatgaccttaaacaagtcacttaacttagagagctttgaaaagcaggaac----tgtgacgtattcgtcttcgtgtccagagcagctggcatgagcagaaattctgcaagtgAATGAACAACTCCAAAGTCTAGGCTGTTTATTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCTAAAC-----TGCAACCTGGGCGGGGCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86611 243 + 111706 ggatctagtcccagctgcctcacttacgggttctatgaccttaaacgagtcacttcacttagagagctttgaaaagcaggaac----cgtgaccgattcatcttcctgtccagagctgctggcatgagtagaaattctgcaagtgAATGAACAACTCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCTGGGTGGGGGCG i rheMac3.chrUn_JH291127 C 0 I 1 s macFas5.chr2 117683 242 + 192460366 ggatctagtcccagctgcctcacttacgggttctatgaccttaaacgagtcacttcacttagagagctttgaaaagcaggaac----cgtgatggattcatcttcctgtccagagctgctggcatgagtagaaattctgcaagtgAATGAACAACTCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCT-GGTGGGGGCG i macFas5.chr2 C 0 I 1 s papAnu2.chr2 114774 242 - 187378091 GGATCTAGTCCCAGCTGCCTCACTTACAGGTTCTATGACCTTAAACAAGTCACTTAACTTAGAGAGCTTTGAAAAGCAGGAAC----CGTGAC-GATTCATCTTCCTGTCCAGAGCAGCTGGCATAAGTAGAAATTCTGCAAGTGAATGAACAACTCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAAAATCCACTGGCAACTGGACTTTTGGAACCCAAAC-----TGCAACCTGGGTGGGGGCG i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 467298 243 - 91754291 ggatctagtcccagctgcctcacttacgggttctatgaccttaaatgagtcacttcacttagagagctttgaaaagcaggaac----cgtgacggattcatcttcctgtccagagcagctggcatgagtagaaattctgcaagtgAATGAACAACTCCAAAGGCTAGGCTCCTTCTTATTCCAAATTCCCCCAGAATCCACTGGCAATTGGACTTTTGGAACCCAAAC-----TGCAACCTGGGTGGGGGTG i chlSab2.chr15 C 0 I 49 s calJac3.chr17 978366 247 - 74750902 gattctagtcccagctgcctcacttatgggtcctatgaccttaaacaagtcccttaacttagagagctttgaaaagcaggaac----catgacttagtcatgttcgtgtgcagagcagctggcatgagtagAAATTCTGCAAGCAAATGAATAACTCTAAAGTCTAGGCTCTTTCTTGTTCCAAATTCCCCC-GAACCCACTGGCAACTGGACTCTTGGAACCCAAACTGCGGTGCAACCTGGGCGGGGTAG i calJac3.chr17 C 0 I 3 s canFam3.chr33 29107687 220 + 31377067 gattctagtcccagttgccctacttactggccgtgtgacct-----------------ttaaaaagctttg-gaggcaggaacgacacatgacttattcatctttgtgtctagaacgtttggcatgagtagaagttcaacaagtggatgaacaactgCAAAATCT-------TTCCTACCCTGAGGT-CCCCAAAGCCCATTGCCAACAGGACTTTTGGGACTCAAAC-----TGCTATTTTAGTCGGGAG- i canFam3.chr33 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I a score=82239.000000 s hg38.chr3_KI270935v1_alt 176839 53 + 197351 CATCTCTACAGAGAGTCGATGTCTGTCCTCTGTGGTCCCTAAACACAT--ACACG s panTro4.chr3 199814593 53 + 202329955 CATCTCTACAGAGAGTCGATGTCTGTCCTCTGTGGTCCCTAAACACAC--ATACG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199828504 51 + 202140232 CATCTCTACAGAGAGTCGATGTCTG----CTGCGGTCCCTAAACACACATACACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120933322 51 + 123690457 CATCTCTACAGAGAGTCGATGTCCG----CTGCGGTCCCTAAACACACACACACG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86855 46 + 111706 --TATCCACAGAGAGTCCATGT-TG----CTGCGGTTCCTAAACACGC--ATACG i rheMac3.chrUn_JH291127 I 1 I 2 s macFas5.chr2 117926 46 + 192460366 --TATCCACAGAGAGTCCATGT-TG----CTGCGGTTCCTAAACACGC--ACACG i macFas5.chr2 I 1 I 2 s papAnu2.chr2 115017 46 - 187378091 --TATCCACAGAGAGTCCATGT-TG----CTGCGGTTCCTAAACACGC--ACACG i papAnu2.chr2 I 1 I 2 s calJac3.chr17 978616 48 - 74750902 TATCTACACAGAGAGGAGATGTCT-----CCTTGGTCCTTAAATGTGC--ACACG i calJac3.chr17 I 3 I 538 s canFam3.chr33 29107907 46 + 31377067 --CATATAGAGAGAGAGGATATCT-----ATGCAGACCTTAAAAGCAC--ACACT i canFam3.chr33 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e chlSab2.chr15 467541 49 - 91754291 I a score=468510.000000 s hg38.chr3_KI270935v1_alt 176892 152 + 197351 GGGAGTGGAGCTGCGGGCAACCCAGGCCAGTGCCCTTCCTCCA--------AGCAGGGCCGCCATTGCAA-GGCCTCACGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACCTCTATGAAGT s panTro4.chr3 199814646 152 + 202329955 GGGAGTGGAGCTGCCGGCAACCCAGGCCAGTGCCCTTCCTCCA--------AGCAGGGCTGCCATTGCAA-GGCCTCATGTGCA-ACACAAATGCCCAGTTCCTGAGACTTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACCTCTATGAAGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199828555 152 + 202140232 GGGAGTGGAGCTGCTGGCAACTCAGGCCAGTGCCCTTTCTCCG--------AGCAGGGCTGCCATTGCAG-GGCCTCATGTGCA-ACACAAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACCTCTATGAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120933373 152 + 123690457 GGGAGTGGAGCTGCCGGCAACACAGGCCAGTGCCCCTCCTCCG--------AGCAGGGCCACCGTTGCAG-GGCCTCATGTGCA-ACACAAATGCCCGTTTCCTGAGGCCTCTTCAGAGTCTCCAGGAAAAGGGTGAAAAGGCATTTAAACCTCTATGAAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86903 159 + 111706 GGGAGTGGAGCTGCCGGCAACACA-GCCAGTGCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCAG-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACCTCTATGAAGT i rheMac3.chrUn_JH291127 I 2 C 0 s macFas5.chr2 117974 159 + 192460366 GGGAGTGGAGCTGCCGGCAACACA-GCCAGTGCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCAG-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACCTCTATGAAGT i macFas5.chr2 I 2 C 0 s papAnu2.chr2 115065 159 - 187378091 GGGAGTGGAGCTGCCGGCAACACA-GCCAGTGCCCTTCCTCCTGTCCTCCCAGCAGGCGTGCCACTGCAG-GGCCTCGTGTGCA-ACACCAATGCCCagttcctgaggcctcttcagaGTCTCAAGGAGAAGGGCAAAAAGGCATTTCAACCTCTATGaagt i papAnu2.chr2 I 2 C 0 s chlSab2.chr15 467590 159 - 91754291 GGGAGTGGAGCTGCCGGCAACACA-GCCAGTGCCCTTCCTCCTGTCCTCCCAGCAGGGCTGCCACTGCAG-GGCCTCATGTGCA-ACACCAATGCCCAGTTCCTGAGGCCTCTTCAGAGTCTCAAGGAGAAGGGCGAAAAGGCATTTCAACCTCTATGAAGT i chlSab2.chr15 I 49 C 0 s calJac3.chr17 979202 151 - 74750902 GGGGACGGAGCTGCCTGCAACACAGGCCAGTGCCCTTCCTCTG--------AGCAGGGCTGCCGCGGCAG-GGCCTCACGTACA-ACACAAATGCCT-GTTCCTGAGGCCTCTTCAGAGTCTCAAGGGAAGGGGTGGAAAAGTATTTAAACCTCTATGGAGC i calJac3.chr17 I 538 C 0 s canFam3.chr33 29107953 134 + 31377067 ----------------GGAACGTAAGCCAGGGCCCTCTGTTTG--------AGCAGGGCCACGATTGTAGAGGCCTCATGCACATGCACAGACCCCCAGTTCCCGGGGCCTCTTCAGAGTCTCAAGGAAGATGCC----AAGCATCTGGACCCCTACAAAGT i canFam3.chr33 C 0 I 312 e mm10.chr16 65465398 2011 - 98207768 I a score=889537.000000 s hg38.chr3_KI270935v1_alt 177044 358 + 197351 AGggccaggcacagtagctcacgcctataatcccagcactttggga-gccgaggcgagcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaacattagcc-gctgtggtgttgggcgtctataatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggcagaggctgcactgagctgagaccacgccactgcactgcagcctgggggacagagagaaactctgtctcaaaaaacaa----acaaacaaaccc--aaaaaaCcaacaacaacagcaacaataaaaaaa-cCGTCTATGAAGAAATCGTCGA s panTro4.chr3 199814798 359 + 202329955 AGggccaggcacagtagctcacgtctataatcccagcactttggga-gccgaggcgagcggctcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaacattagct-gctgtggtgttgggcgtctgtaatcccagctactcgggaggctgtggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccactgcactgcagcctgggggacagagagaaactctgtctcaaaaaacaa----acaaacaaaccc--aaaaaaCCAGCAACAACAGCAACAACAAAAAAAACCGTCTATGAAGAAATCGTCTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199828707 352 + 202140232 AGggccgggcgcagtagctcacgcctataaccccaacactttcgga-gccgaggcgagcggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaagccccatctctactaaaaatacaaacattagcc-actgtggtgttgggcatctgcaatcccagctactcgggaggctgaggcaggagaatctcttgaacccgggaggcagaggctgcagtgagctgagatcgtgccactgcactccagcctgggggacagagagaaactctgtctcagaaaacaa----acaaacaaaccc--aaaaaaCCATCAA------CAACCACAAAAAAA-CCGTCTATGAAGAAACCGTCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120933525 345 + 123690457 AGggccgggcgcagtagctcacgcctataatcccagcactttggga-gccgaggcaagcgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaagccccatctctactaaaaatacaaacattagcc-gctgtggtggcgtgcgtctgcaatcccagctactcgggaggctgaggcaggagaatctcttgaatccgggaggcagaggctgcagtgagctgatatcgcgccactgcactccagcctggata--agagagaaactctgtctcaaaaaacaa----acaaacaaaccc--aaaaaaCCAACAA------CACC-----AAAAA-CCGTCTATGAAGAAACTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87062 329 + 111706 AGggccgggtgcagtggctcacacctgtaaccccagcactttggga-gctgaggcgggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtagtgggcgcctgcaatcccagctactcgggagtctgaggcaggagaatctcttgaacccaggaggcggaggctgcagtgagctgagatcacaccattgcactccagcctgggtgacagagtgagactctgtctcaaa----aa----acaaacaaaTCC--ATAAAACCAACAA------CAAC-----AAAAA---------------ACCGTCTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 118133 329 + 192460366 AGggccgggtgcagtggctcacacctgtaatcccagcactttggga-gctgaggcgggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggcgcctgcaatcccagctactcgggagtctgaggcaggagaatctcttgaacccgggaggcggaggctgcagtgagctgagatcacaccattgcactccagcctgggtgacagagtgagactctgtctcaaa----aa----acaaacaaaTCC--ATAAAACCAACAA------CAAC-----AAAAA---------------ACCGTCTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115224 329 - 187378091 agggccgggcgcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactgaaaatacaaaaattagct-gctgtggtggtgggtgcctgcaatcccagctactcaggagtctgaggcaggagaatctcttaaacccgggaggcagaggctgcagtgagctgagatcacaccacttcactccagcctgggtgacagagcgagactctgtctc-aa----aa----acaaacaaatcc--ataaaaccaacaa------caac-----aaaaa---------------accgtCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 467749 326 - 91754291 AGggccaggcgcagtggctcacacctgtaatcccagcactttggga-gccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatgcaaaaattaact-gctgtggtggtgggcgcctgcaatcccagctactcaggagtctgaggcgggagaatctcttgaacccgggaggcggaggttgcagtgagctgagatcacaccacttcactccagcctgggtgacagagcgagactctgtctcaaa----aa----acaaacaaatcc--ataaaac---caa------caac-----aaaaa---------------aCCGTCTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 979353 340 - 74750902 AGggccggatgccatggcccacgcctgtcattccagctctctggga-actgaggtgggcagatcacttgaggccaggagtttgagaccagcctgaccaacatggtgaaaccccatctctaccaacaatacaaaaattagccaggcatggtggtgggtgcctgtaaccccagctactcgggagaccgaggcaggagcgtcacgtgaacccgggaggcggaggctgcagtgagccgagatcacgccactgtactccagcctgggcaacagagtgagactctgtctcaataaacaaTCACACATACAAACCCCAAAACAAGCAGCAA------CAAC-----AACTA---------------AACCCCTA i calJac3.chr17 C 0 C 0 e mm10.chr16 65465398 2011 - 98207768 I e canFam3.chr33 29108087 312 + 31377067 I a score=159411.000000 s hg38.chr3_KI270935v1_alt 177402 55 + 197351 TGAGGTGCCAACAGACTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CATGCTGGGGC s panTro4.chr3 199815157 55 + 202329955 TGAGGTGCCAACAGACTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CATGCTGGGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199829059 57 + 202140232 TGAAGTGCCAATAGACTCAGTT-ATTTTTGACTCATTTCCTCAGAACCATGCTGGGGC i ponAbe2.chr3 C 0 M 6447 s nomLeu3.chr11 120933870 55 + 123690457 TGAAGTGCCAACAGACTCACTT-A-TTTTGACTCAATTTCTCAGAA-CATGCTGGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87391 55 + 111706 TGAAGTGCCAACAGATTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CACGCTGGGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 118462 55 + 192460366 TGAAGTGCCAACAGATTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CACGCTGGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115553 55 - 187378091 TGAAGTGCCAACAGATTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CACGCTGGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 468075 55 - 91754291 TCAAGTGCCAACAGATTCAGTT-A-TTTTGACTCAATTTCTCAGAA-CACGCTGGGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 979693 52 - 74750902 TTAAGTGCCAACAGATTCAGTTCA-CTTTGAC----TTCCTCGGAA-CGTGCTGGGGC i calJac3.chr17 C 0 C 0 s mm10.chr16 65467409 55 - 98207768 TGAGGTGCCGACAAATCACACT-C-GTTTGGAGCAGCAACTGAGTA-GACGCTAGAGA i mm10.chr16 I 2011 C 0 e canFam3.chr33 29108087 312 + 31377067 I a score=67888.000000 s hg38.chr3_KI270935v1_alt 177457 36 + 197351 ----GGGAACTCAGCCTAGCAGTAAGAAAGACGTATATTT s panTro4.chr3 199815212 36 + 202329955 ----ATGAACTCAGCCTAGCAGAAAGAAAGACATATATTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120933925 36 + 123690457 ----ATGAACTTAGCCTAGTAGAAAGAAAGATGTATATTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87446 32 + 111706 ----ATGAACTCAGCCTAGT----AGAAATATGTATATTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 118517 32 + 192460366 ----ATGAACTCAGCCTAGT----AGAAATATGTATATTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115608 32 - 187378091 ----ATGAACTCAGCCTAgt----agaaatatgtatattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 468130 32 - 91754291 ----ATGAACTCAGCCTAGT----AGAAATATGTATATTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 979745 32 - 74750902 ----GTGAGCTCAGCCTAAT----AGAAGGATGTATGTTT i calJac3.chr17 C 0 C 0 s mm10.chr16 65467464 35 - 98207768 AAGGATGAGCTGAGCCGAAC----AGAAAGACCCAT-CTT i mm10.chr16 C 0 C 0 e canFam3.chr33 29108087 312 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=1265368.000000 s hg38.chr3_KI270935v1_alt 177493 576 + 197351 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTCTCTGTCCTGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTTTAAGCACTTAACAGCACCGTGAAATCAGAGAA--------AAGACACAGAGTAGCAAA-ACCACCCG-TT-GAGCGTACAAAAGGCCAACCA---CTTCTTGTCCTCTCATTGCCTCTTGTCCTTAGCAATGAAGACACAAATCACTTGCGTGTCAAGCACT-GCCAGGCCAGCCTCTGCCAGGCCAGCCTCTGCCTCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCTGTCCGCTGGAGCGAGCCCCTGCTCTAGG----GCCA------TGGCCCTC-GGGGTCCGTTCATGCAGCAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CGGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGATATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCCGTCTTCCCAGGCCTCTTTCTCAAA s panTro4.chr3 199815248 560 + 202329955 AAGGTAAAAGGCT--GAAACTAGGGGGAGAGAGAGCCTATAAGGTCTCTGTCCTGGCCTTCAGAGAAGTGGCTCTGTGAGCTACACGATGTGCATATTT-AAGCATTTAACAGCACCGTGAAATCAGAGAA--------AAGACACAGTGTAGCAAA-ACCACCCG-TT-GAGCATACAAAAGGCCAACCA---CTTCTTGTCCTCTCATTGCCTCTTGTCCTTAGCAATGAAGACACAAATCACTTGCGTGTCAAGCACT-GCCAGGCCAGCCTCTGCC---------------TCCACGGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCTGTCCGCTGGAGCGAGCCCCTGCTCTAGG----GCCA------TGGCCCTC-GGGGTCCGTTCATGCAACAAGCCACATTCTGAATACACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGAGATGAC-CCTGGGCCGACACAAG------TGCCATTCCGGGTTCAATCACCCTCCTTCCCCCGTCTTCCCAGGCCTCTTTCTCAAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120933961 585 + 123690457 AAGGTAAAAAGTTGAGAAACTGGGGGGAGAGAGAGCCTATAGGGTCTCTGTCCTGGCCTTCAGAGAAGTGGCTGTGTGAGCTACACGATGTGCATATTTTAAGCATTTAACAGCACGGCGAAATCAGAGAA--------AAGACACA--GTAGCAAA-ACCACCCG-TT-GAGCATACAAAAGGCCAACCACTTCTTCTTGTCCTCTCATTGCCTCTTGTCCTTGGCAATGAAGACACAAATCACTTGCGTGTCAAGCATT-GCCAGGCCAGCCTCTGCCAGGCCAGCCTCTGCCTCCATGGCCAAGCCCAGAAACCAAGGGCATGGGGGG----ACTCACAGGCAGGG--AGCGGTGAGACAGAGCCGTCCGCTGGAGCGAGCCCCTGCTCTAGG----GCCA------TGGCCCTC-AGGGTCCTTTCATGCAATAAGCCACATTCTGAATATACCAAGCCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTAGATGAAGGGATATGAC-CCTGGGCCGACACAAGTGTTCATGCCATTCTGGGTTCCATCACCCTCCTTCCCCCATCTTCCCAGGCCTCTCTCTCAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87478 550 + 111706 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGCCTAAAAGGTCCCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATGATGTGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACCCG-CT-GAGCACACAGAGGTCCAGCCG---CTTTGTGTCCTCT--------------CTTGGCAATGAAGACACAAACCACTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCATGGCGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCCGTCTGCTGGAGCGAG-CCCTGCTCTGGG----GCCACG--ACTGGCACTC-GGGGTCCCTTCGTGCAATAAGCCATGTTCTGAATACACCACGCCAGCCCCTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCATGAGGATCCTTACATGAAAGGACGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGTCACCCTCCTT-CCCCTTCTTCCCAGGCCTCTCTCTCAAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 118549 551 + 192460366 AAGGTAAAAGGTT--GAAACTAGGGGGAGAGAGAGCCTAAAAGGTCCCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATGATGTGCACATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACCCG-CT-GAGCACACAGAGGTCCAGCCG---CTTCGTGTCCTCT--------------CTTGGCAATGAAGACACAAACCACTTGCGTGTCGAGCGTT-GCCAGGCCAGCCTCGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGTGTGGCGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCCGTCTGCTGGAGTGAG-CCCTGCTCTCGG----GCCACG--ACTGGCACTC-GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACACCAGCCCCTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACGAGGATCCTTACATGAAAGGACGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGTCACCCTCCTTCCCCCTTCTTCCCAGGCCTCTCTCTCAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115640 550 - 187378091 aaggtaAAAGGTT--GAAACTAGGGGGAGAGAGAGTCTAAAAGGTCCCTGTCCAGGCCTTCAGAGAA---GCTCTGGGAACTACATCATGTGCATATTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACGCG-CT-GAGCACACAGAGGTCCAGCCG---CTTCATGTCCTCT--------------CTTGGCAATGAAGACACAAACCACTTGCGTGTTAAGCGTT-GCCAGGCCAGCCTTGGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCGTGGCGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCCGTCTGCTGGAGCGAG-CCCTGCTCTGGG----GCCACG--ACTGGCACTC-GGGGTCCCTTCGTGCAATAAGCCACGTTCTGAATACACCACGTCAGCCCTTGCAAACCCACAGGAAGCA-CAGGGTGGCTTTTTAGAGGCACAAGGATCCTTACATGAAAGGATGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTCCGtcaccctccct-ccccttcttcccaGGCCTCTCTCTCAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 468162 554 - 91754291 AAGGTAAAAGGTT--GAAACTGGGGGGAGAGAGAGCCTAAAAGGTCCCTGTCCAGGCCTTCAGAGAAGTGGCTCTGGGAGCCACATGACGTGCATCTTTTGAGCATTTAACGGCACCGTGACACCAGAGGA--------CAGACTCA--GGAGCAAA-ACCACGCG-CT-GAGCACACAGAAGTCCAGCCG---CTTCGTGTCCTCT--------------CTTGGCAATGAAGACACAAACCATTTGCGTGTCAAGCGTT-GCCAGGCCAGCCTCTGTC---------------TCCACAGCTGAGCCCAGAAACCAAGGGCGTGGTGGG----ACTCACAGGCAGGG--AGCGGTGAGGCAGAGCCGTCTGCTGGAGCGAG-CCCTGCTCTCGG----GCCACG--ACTGGCACTC-GGGGTCCCTTCGTGCAATAAGCCACATTCTGAATACACCACGCCAGCCCTTGTAAACCCACGGGAAGCA-CAGGGTGGCTTTTTAGAGGCACAAGGATCCTTACATGAAAAGATGTCAC-CCTGGGCCGACACCAGTGCCCATGCCATTCCGGGTTTCATCACCCTCCTTCCCCTTTCTTCCCAGGCCTCTCTCTCAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 979777 545 - 74750902 GAGGTAGAAGGTT--GAAACGAGGGGGAGAGACAGGCTGTCGGGTCTCTGTCCTGGCCTTCAGAGAAGTGGCTCTGGGAGCCACAC--TGTGTGTATTTTAAGCACTTAACAGCACCATGATGCCGGAAAA--------CAGACGCA--GCGGCGAA-ACCACTCGTTT-GAACATGTAAAAGGCCAGCCA---CTTCTTGTCCTGC--------------CTCGGCAATGAAGACAC-------TTGCACACCAAACATT-GCCAGGCCAGCCTCTGTC---------------TCCGAAGCTGAGCCCAGAAACCAAGGGCGTGGAGGG----ACTGGCAGGCGGGG--AGTGGTGAAGT-GTGCCATCAGCCGCAGCGAGCCCCTGCTCTATG----GCCAAG--ATTGGCATTCGGGGGTCAGTTCATGCAGTGAGCCACATTCTGAATACACCAAGCCAGCCCTTACAAACCCACAGCAGGCA-TGGGGTGGCTTTTTAGAGGCACAAGAATCTTTAGATGAAGGAATGT-AC-CCGGCACCCACAC-AGTGCCCACGCCAAGCAGGGTTCCACCACTCTCCTTCCCCCATCTGCCCAGGCCTCTCTCTCAAA i calJac3.chr17 C 0 C 0 s mm10.chr16 65467499 467 - 98207768 GAGGGCAAAGGTT--GAAACTAGGAGGAGCCTGGGCCTACAGAGTGTTAGTCCCAGTCTAGAGCGAAGAGGCCCCTGAGACTACTTTGCATGTCTTTGTGAGGTATTCAACC-CACCAAGAAACCAGAAAACAAAGTAGCAAACACA--GTAGCAAAGACCACTCCTTT-GAGCATGGAAAAGGTCAACTA---CTTCTCAGCCTCT--------------CCTGGCAACAAAGACACAAGCCACTTATTTGTTAAACAGTGGCTTGACCATCCTCCCTC------------------------------AGAGGTC-AGGGCATGGAGGAGACTGCCCAAAAGAAAGG--ACCTG-----CAGAAACAGCAGTCAGAGTTTGGTCCTGC----GG----GCAGAGGTAGGGGGCCTT-TGAGTCTGTCCAGGCAATAAGGCACATTTGAAGCAAAGCAAGGCAGTACATGCAAGCGCACAGGAC------GGGTAGT------------------TCCTGAGGTGTAGGGACCTGCCACTTGAGCCAACAGAGGTGTCCA--------------------------------------------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29108399 521 + 31377067 aaaaaaaaaaaAA--AAAAAAAGGAGGAGAGACACCTCTAACGTCTTCAGTCTTGGCCTTCAAAGAAGTGGCCCCAAGAGCCACATTCTGGGCAGACCTGAAGCATTGAGGGGTGTCACAAAACCAGGGAA--------GAGACT-------GCACA-ACCACTTG-CTGGAGCACATAAAAAGCCAACTG---CCTCTTGGCCT----------------CCTGGTAATGAAGACA---ATCACTGGCACGTCAGACGCT-GCCGGGACAGCCTCGGCC---------------CCCAGGGCCACGGCCAGGAATCGAGGCTGGGGAGGGG---ATTTCTGGGCAAGGCCCCCCGAGAAGCAGTGCCCTCAGCTCCAGCGGG----CGCTCCAGGTGATGGCAGA--GCCGGCCTTC-GGGGAC-GCTCACGCAATGAGCCCCGTCCT-ACTAAGTCACGCCAGCCTTTGCAAACCCACAGGAAAGACCGGGGTGGCCTTTCAGAGGCTCAAGAATGCTTGGATGAATGGAAATG---CCTGAGCCAACAGATGTG-------------------------CCTTCCCCTCCTGGCTTCGCCCTCCTCACCCTCGAA i canFam3.chr33 I 312 I 45 e ponAbe2.chr3 199829116 6447 + 202140232 M a score=534813.000000 s hg38.chr3_KI270935v1_alt 178069 295 + 197351 Cacgtcttta----------tggcttttc--------------------ttttttttttagacagagtcttgct------ctgtca-cccaagctag-----agtgctgccatttcggctccctgcaacctctgcctcccaggttcaagccattctcctacctcagcctcccgagtagctggaattacaggcgctcgccaccacgcccggcaaaattttttatttttagtggagacagg---------gttggccaagctggtcttgaactcctgacctcaggtgatccacccgcctgggcctccaaaagtgctgggattaca-gcgtgagccaccgcgcccggccc s panTro4.chr3 199815808 295 + 202329955 Cacatcttta----------tggcttttc--------------------ttttttttttagacagagtcttgct------ctgtca-cccaagctag-----agtgctgccatttcggctcactgcaacctctgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctggaattacaggcgctcgccaccacgcccggcaaaattttttatttttagtggagacgga---------gttggccaggctggtcttgaactcctgacctcaggtgatccacctacctgggcctccgaaagtgctgggattaca-gcgtgagccaccgcgcccggccc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120934546 318 + 123690457 CACGTCTTTA----------TGGCttttcttttt--ttcttctttttttttttttttttagacagagtcttgct------ctgtca-tccaagctagagtgcagtgctgccatttcggctcagtgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctggaattacaggtgctcgccaccacgcccagcaaaattttttatttttagtggagacggg---------gttggctaggctggtcttgaactcgtgaccacaggtgatccacccacctgggcctccgaaagtgctgggattaca-gcgtaagccaccgcacccggccC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 88028 303 + 111706 CGTGTCTTTA----------TGGCttttctc---------------ttttttttttttttgatggagtctcgct------ctgcca-cccaagctagagggccatggtatgatctcggctcactgcaacctgtgcctcccgggttcaagcgattctcctgcctcagcctcccgaggagctggaattacagccgcccaccaccatgcctggcaaaatgtc---tttctagtggagatggg---------gttggccaggctggtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcccggccC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 119100 315 + 192460366 CGTGTCTTTA----------TGGCttttctctt------tttttttttttttttttttttgatggagtctcgct------ctgtca-cccaagctagagggccgtggtgtgatctcggctcactgcaacctgtgcctcccgggttcaagcaattctcctgcctcagcctcccgaggagctggaattacaggcgcccgtcaccatgcctggcaaaatgttgtatttttagtggagacggg---------gttggccaggctagtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcccggccC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116190 306 - 187378091 CGTGTCTTta----------tggcttttctc---------------ttttttttttttttgatggagtctcact------ctgtca-cccaagctagagtgccgtggtgtgatctcggctcactgcaacctgtgcctcccgggttcaagcgattctcctgcctcagcctcccgaggagctggaattacaggcgcccgccaccatgcctggcaaaatgttgtatttttagtggagacggg---------gttggccaggctggtcttgaactcctgacctcaggtgacccaccaaCCTGGGtctccgaaagtactgggattacaggtgtgagccaccgcgcccggccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 468716 312 - 91754291 CGTGTCTTTA----------TGGCttttctc---------ttttttttttttttttttttgttggagtctcgct------ctgtca-cccaagctagagtgccgtggtgtgatctcggctcactgcaacctctgcctcccaggttcaaatgattctcctgcctcagcctcccgaggagctggaattacaggcgcccgccaccatgcctggcaaaatgttgtatttttagtggagacggg---------gttggccaggctggtcttgaactcctgacctcaggtgatccaccaacctgggcctccgaaagtactgggattacaggtgtgagccaccgcgcccggccC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 980322 344 - 74750902 CAGGTCTCTATGGTATGCCTTGGCTTttctctttccttttcttttcttttcctttctttccttCCTTCCTTCCTTCCTAACTCTCATcccaggctggagtgcagtggcaccatctctgctggccgaaaccgctgcctcctgggttcaagtgcttctactgcctcaacctcctgagtagctgggattacaggcacctgccactacacccagc--ttttttgtgtttttagt-aagacgggtttcaccacattggccaggctagcctcaaactcctgacctcaggtgatttgcctgcctcggcctcccaaagtgctgagattacaggcgtgagcccccgcgcctggccC i calJac3.chr17 C 0 C 0 s mm10.chr16 65467966 89 - 98207768 -----CTTTA---------------CTTC---------------------------------------------------CTGGCT-CC--------------------------------ATTGTACTCCCTGCCTGCTAACTCCA---------------------------------------------------CCCCACCCCCATC---------------------AGAAGGA------------------------------------ACC----------------------CTTTCAAAGATGT-----TTGCA-------------------GGCCC i mm10.chr16 C 0 C 0 e canFam3.chr33 29108920 45 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=1792467.000000 s hg38.chr3_KI270935v1_alt 178364 761 + 197351 tttatgccttttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagtagccccttccccctgggctcagtttgccgatgaagagcctaagactccagagccaaa-aggcgttgcctgt--gttccctgggctgccaagggcgtcgctgatgct---ggacctctgagtttcagcccctgctcttccctgtg--caccttgctg-GTCGTTGGCCAAAATTTGGCTGATGTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CAGTG-GGGTTTC------CCAGAGGGG-CAGAGGGGTCTGTGGAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACTGACAGATAGACCGGGGGTTCTCCGAGGAGGGGCCCATAAAGACCCTTCCCCGT-----------GGAGTGCGCTGTGGCC-GGCGTCccctcccctgcctgccctgcacttgctccag-cctgtcacctccctg-------------------------------------G-GGTCAC------TGATAGTG-----------CTGGAGACCAAGGCCTATTTCGACCCAGTTGCCTTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATTCCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCAGCTCCTTTGTGGAAACC-CTGTGTTTTTCCTCTGGCCT-GG s panTro4.chr3 199816103 762 + 202329955 tttatgccttttctactttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagtagccccttccccctgggctcagtttgccgatgaagagcctaagactctggagccaaa-aggcgttgcctgt--gttccctgggctgccaagggcgtcgctgatgct---ggacctctgagtttcagcccctgctcttccctgtg--caccttgctg-GTCGTTGGCCAAAATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTTTGAGTGTCCTGGAGCA-CAGTG-GGGTTTC------CCAGAGAGG-CAGAGGGGTCTGTGGAGAGTTTTGGTGTCCTCGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACTGACAGAGAGACCGGGGGTTCTACGAGGAGGGGCCCATAGAGACCCTTCCCCGC-----------GGGGTGCGCTGTGGCC-GGCGTCCCCTTCCCTGCCTGCCCTGCACTTGCTCCAG-CCTGTCACCTCCCCG-------------------------------------G-GGTCAC------TGATAGTG-----------CTGGAGACCAAGGCCTATTTCGACCCAGTTGCCTTTCCCTGTGGCATGGAACCAGGACGGCCAGGCTTCCTTCTGAGTCATTCCTGCCTGGGGCGACCAGTAGACACCAAATTTCCATCTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGCGGCGGCTCCTTTGTGGAAACC-CTGGGTTTTTCCTCTGGCCTGGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120934864 726 + 123690457 TATATGCATTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccttacgtagtaaccccttccccttgggct--gtttgccgatgaagagcctgagactccagagccaaa-gggtgttgcctgt--gttccccgggctgccaagggcgtcgctgacgct---ggacctctgagtttcagcacctgctcttccctgtg--caccttgctg-GTGGTTGGCCAAAATTTGGCTGATTTTCCTGGCAGGACCTCTTGTCCAGGGATCCTTTCCTTCTGAGTGTCCTGGAGCA-CAGTG-GGGTTTC------CCAGAGGGC-CAGAGCGGTCTGTGGAGAGTTTTCGTGTCCTTGGTGGCAAGTTGAGGTGG-------CCTGTCCCAGACTGAC----AGACCGAGGGTTCTCTGAGGAGGGGCCCATAAAGACCCTTCCCTGC-----------AGGGTGCGCTGCGGCC-GGCGTCCCCTCCCCTGCCTGCCCTGCACTTGCTCCAG-CCTGTCACCTCCCCG-------------------------------------G-GGTCAC------TGATAGTG-----------CTGGAGACCAAGGCCTATTTCAACCCAGTTGCCTTTCCCTGTGGCGTGGAACCAGGACAGCCAGGCTTCCTTCTCAGTCATTCCTGCCTGGGGCGACT-GTAGACACCAAATTTCCATTTG-TCCTTGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAA-----------------------------GGAAACC-CTGGGATTTTCCTCTGACCTGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 88331 762 + 111706 TTTATGACTTTTCTACTTTACACCAGATGCTGTCTCGTTTCATCCTCATGACAACCCTACGTAGCAGCCCCTTCCCCTTGGGCTCAGTTTGCCGACGAAGACC--GAGACTCCAGAGCCAAAGGGGCGTTGCCTGT--GTTCCCCGGGCTGCCAAGGGCGTCGCTGGCGCT---GGGCCTCTGGGTTCCAGCTCCTGCTCTTTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-------CCAGAGGG--CAGAGGGGTCTATGGAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACCGACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGTGGCC-GGCGTCTCCT-CCCTGCCTGTCCTGTGCTTGGTCCAG-CCTGTCACCTCCCCG-------------------------------------G-GGTCAC------TGATAGTGAC-------CCTTGGAGACCAAGGCCTATTTCAACCCAGTGGCCTTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATTTCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAATCCTCATTGTGGCGGCTCCTTTGTGGAAACC-CTGGGTTTTTCCTCTGGCCTGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 119415 762 + 192460366 TTTATGACTTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccctacgtagcagccccttccccttgggctcagtttgccgacgaagacc--gagactccagagccaaaggggcgttgccTGT--GTTCCCCGGGCTGCCAAGGGCGTCGCTGGCGCT---GGGCCTCTGGGTTCCAGCTCCTGCTCTCTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCGGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-------CCAGAGGG--CAGAGGGGTCTATGGAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACCGACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------CGGGTGCGCTGTGGCC-GGCGTCTCCT-CCCTGCCTGTCCTGTGCTTGGTCCAG-CCTGTCACCTCCCCG-------------------------------------G-GGTCAC------TGATAGTGAC-------CCTTGGAGACCAAGGCCTATTTCAACCCAGTGGCCTTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATTCCTGCCTGGGGCCACCAGTGGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAATCCTCATTGTGGCGGCTCCTTTGTGGAAACC-CTGGGTTTTTCCTCTGGCCTGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116496 770 - 187378091 tttatGACTTTTCTACTTTACACCAGATGCTGTCTCGTTTCATCCTCATGACAGCCCTACGTAGCAGCCCCTTCCCCTTGGGCTCAGTTTGCTGACGAAGACCCTGAGACTCCAGAGCCAAAGGGGCGTTgcctgt--gttccccaggctgccaAGGGCGTCGCTGGCGCT---GGGCCTCTGGGTTCCAGCTCCTGCTCTCTGCTGTG--CCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGATTTTCTTGGCAGGACCTCCTGTCCCGGGATCCTCTCCCTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-------CCAGAGGG--CAGAGGGGTCTATGGAGAGTTTTGGGGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACCGACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGCGGCC-GGCGTCTCCT-CCCTGCCTGTCCTGTGCTTGGTCCAG-CCTGTCACTTCCCCG-------------------------------------G-GGTCGCTGATAGTGATAGTGAC-------CCCTGGAGACCAAGGCCTATTTCAACCCAGTGGCCTTTTCCTGAGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATTCCTGCCTGGGGCCACCAGTAGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCCTTAAGGAAACCCTCATTGTGGCGGCTCCTTTGTGGAAACC-CTGGGTTTTTCCTCTGGCCTGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 469028 765 - 91754291 TTTATGACTTTTCTActttacaccagatgctgtctcgtttcatcctcatgacaaccctacatagcagccccttccccttgggctcagtttgctgacgaagaccctgagactccagagccaaaggggcgttgccTGT--GTTCCCCGGGCTGCCAAGGGCGTCGCTGGCGCT---GGGCCTCTGGGTTCCAGCTCCTGCTCTTTGCTGTGCCCCCCTTGCTG-GTCGTTGGCCACAGTTTGGCTGA-TTTCTTGGCAGGACCTCCTGTCCCGGGATCCTCTCCTTCTGCGTGTCCTGGAGCA-CAGTG-GGGTTT-------CCAGAGGG--CAGAGGGGTCTATGGAGAGTTTTGGTGTCCTTGGTGGCAAGTTCAGGTGG-------CCTCTCCCAGACCGACAGACAGACTGCGGGTTCTCCGAGGAGGGGCCCACAGAGATCCTTCCCCTC-----------GGGGTGCGCTGTGGCC-GGCGTCTCCT-CCCTGCCTGTCCTGTGCTTGGTCCAG-CCTGTCACCTCCCCG-------------------------------------G-GGTCAC------TGATAGTGAC-------CCTTGGAGACCAAGGCCTATTTCAACCCAGTTGCCTTTTCCTGGGGCATGGAACCAGGACAGCCAGGCTTCCTTCTGAGTCATTCCTGCCTGGGGCCACCAGTAGACACCAAATTTCCATTTG-TCCTCGTCTAGCCCACCTCTGT-CTGCTGTGCCTTATC----CTTTAACCCTTGAGAGCCAGGGCTGTTCTTTAAGGAAACCCTCATTGTGGCGGCTCCTTTGTGGAAACC-CTGGGTTTTTCCTCTGGCCTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 980666 756 - 74750902 CCTATGGCTTTTCTACTTCACACCAGATGCTGCCTCG-TTCATTCTCATGACA---------------CCCTTCCTTTTGGGCTGAGATTGCTGACGAAGAGCCTGAGACTCCAGAGCCGAAGGGATGTCCGCTGCTGGGTTCCCCGGCTGCTGAGGGCGCCGCTGACACT---GGGCCTCTGAGTTTCAGCTCCTGCTCCTCACTTTG--CACCTTGCTG-GTCCTCGG-CGGAATTTGGCTGATTTTCTTAGCAGGACCTCTTGTC---------------TCTCAGTGTCCTGGAGCA-CAGCG-GGCTTC-------CCGGAGGGG-CAGAAGGGTCTGTGGACAGTTTTGGTGTCCTAGGTGGCAAGTTGAGGTGG-------CCTCTCCCAGACTGGCAGACAGACTGGGGGTTCTCAGAGGAGGAGCCCGTAGAGACCCTTCCCCTC-----------AAGGTGTGCTGTGACC-AGCGTCTCCT-CC---CCTGCCCTGCACCTGCTCCAG-CCTGTCACCTCCCCGTGGCTGC------AGGGGTGGTGGCACCTGGGTTACAG-GGCCAC------TGATAGTA-----------TTGGAGACCAAGGCTTATTTCGACCCAGCTGCCTTTCCCTGGGGCGTGGAATC---ACGACCCAGCTTCCTTCTGAGTCATTCCTGCCTCCAGCAACCAGTAGACACCAAG-TTCCGTCTG-TCCTTGTCCAGCCCACCTCTGTCCCGCTGCGCCTAATC----CTTTAACCCTTGCGAGCCAGGGCTGTTCCTTAAGGAAGCCCTCATTGTGGCGGCTGCTCTGTGGACACC-CTGGGCTTTCCCTGTGACCTTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65468055 674 - 98207768 TT--------------------CTTGATGCTATCTCAATTTATCCTCGTGACGATGCTACACTACAGTCCCTTCC-TTTAGACTC-GTTTGCCATCTAGCACGCTGAGACTGTCCGGCCACA-GACCTTTGCCTCT--GCTGCCT-GGCTGCCGAGCTCTTC------------------------TACAGTCACATCTATT-GTTGAG--TCCCTCGCCT-GC-----------ATCTCTTTGCTTTCCTCGACAGACTATCCTGTACAAAGATCCTCTTCTTCTGAATGTCCTTGGGCAGGGGTG-GGGGACCTCAGGGCAGGAGGGGACAGATGTGCCTGTGG--AGTTTCAG---CCTTGGCTGCAGGCTGGGGGGGGGGGGGCACTTTCTTAACCCAACGAAAAGATTGGATGCTCTCTAAAAGAAGGCCAAGGATGCCCTTTTCCCT-------------GTGTATCCTGTGGCCAAGGGTCTCGT-C----TCCATCCTGCATTAGCAATGA-CCTCCTATCTTCCCA-------------------------------------GTGGCCAC------TCAAAGCAGCGTTGTCACCTCTGTGACTAGGTC-------------ACTGACGGTCCTAATG----GGAAGCATAGCTGCCGGGCTTCCTCGTGAGTCATTCCTGACAGAAGTCA-----------CAGAGTTACGC----TCCCTGTCTGGTCCACCTTTGT-CCTC---ACCTTTCCAGAACTTTCACTCT--GGAGCCCAGGCTCTACC---AGGAAGGAC------------CTCTTCTGTAGAAGCA-CTGAGCTTTCTATCTGACCCGG- i mm10.chr16 C 0 I 1765 s canFam3.chr33 29108965 774 + 31377067 TTTACGGCTCTTCCACTTTACAGCAGACACTACCTCGTTGTATCCTCACCACAA--------------TGCTTCCCACTTAACTCATTTTGCCAATAAAGTCACCAA---------CCTAAAGGGACTCTTCTCAT--GTCCCCTGGGCTGCCTAAGTGGCAACATTCACTCAAAGTTTTCTGATTTGAAGTTCCTGCTCTTTGCTGTA--CATTTTGCTGAACCACTGACCTAAATTTGATCTATCTTCTTACTAGGACCTCTTGTTCAGGGGTTCTCTCCTTTTGGGTGTCTCCAAGCA-CAGCGAGAGTTTC------CTGGGGTGG-GAGTGGGG---GAGCAGATGGCCTGTGCCCTTGGTGGCA-TCTGGGTAGG-------CCTCTCCCAGACTGCCAGACAGCCTAGAGGTTCTCTGAAAGAGGGAGAGCAGGACACCCTGCCCTCTGGGGCCCTCTGGGGTCCTCCGTGACG-GCGGTCATCT-------CTGGCCTGCACTTGAGGCAGCCCCGTAAGCTCCCAGTAATGGCCCAGGGCAGGGCAGTGGCCCCTCGATTACTG-GGACAC------TGATAGTA-----------TTGGAGACTGGATTTGAGTTTGACCCAGTTTCCTCGCGCAG-GGTGTGGAATC---------AGGCTTCTTTCCAACACATTCTCAGCGGGAGCCGCTAGTCTCCACTGGGCTTCCATCAGCTCCCTGCCCAGCCCACGTCTGT-CCACCCTCCTTCTGC----CTTTGACTTTTGACAGCCAGGGATTTTCTTCCAGGAAGTCCTTACTACTGCAGCTTCTTCATGGAAACCACAGGGCTCCCCCGCCGGCCAGA- i canFam3.chr33 I 45 C 0 e ponAbe2.chr3 199829116 6447 + 202140232 M a score=207239.000000 s hg38.chr3_KI270935v1_alt 179125 101 + 197351 GCTTCAGTGTGACCCAGCCTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAACCCCT-TCAGGGAG s panTro4.chr3 199816865 101 + 202329955 GCTTCAGTGTGACCCACCCTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCAAGTATAGGCAGGTCATCTGTAAGCCCCC-TCACGGAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120935590 100 + 123690457 GCTTCAGTGCGACCCAGACTGGGTGAGGGTCCTGCCGGCAAGTGTGCAAACAGACCCTAGACTCGAATATAGGCAGGTCATCTGTAAGTCCC--TCAGGGAG i nomLeu3.chr11 C 0 I 4997 s rheMac3.chrUn_JH291127 89093 101 + 111706 GCTTCAGTGTGACCCAGCCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCAGGGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120177 101 + 192460366 GCTTCGGTGTGACCCAGCCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCAGGGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117266 101 - 187378091 GCTTCAGAGtgacccagcctgggtgagggtcCTGCCAGAAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCAGGGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 469793 101 - 91754291 GCTTCAGTGTGACCCAGCCTGGGTGAGGGTCCTGCCAGCAAGTGTGCAAACAGACCCTAGACTCAAACATAGGCAGGTCATCTGTAAGCCCCC-TCAGGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 981422 78 - 74750902 GCTTCGGTGTGACCCAG-------------CCTGCCAGCAAGTCTGCAAAGAGA---------CAAATACAGGGAGACCATCTGCCAGCCCC--TCAGGGAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29109739 71 + 31377067 -----CACACGGCTGGGCCTGGACCA-CGCACTGGCAGCAGGGCCGGAAAC-------------------AGGCAGGTCG------GGCCCTCGGCTGGGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=49125.000000 s hg38.chr3_KI270935v1_alt 179226 35 + 197351 CCAAAAGGAACGGGGCTGG-CTGGCTGCCAGTCCTC s panTro4.chr3 199816966 35 + 202329955 CCAAAAGGAACGGGGCTGG-CTGGCTGCCAGTCCTC i panTro4.chr3 C 0 M 387 s rheMac3.chrUn_JH291127 89194 35 + 111706 CCAAAAGCAATGGGGCTAG-CTGGCTGCCAGTGCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120278 35 + 192460366 CCAAAAGGAATGCGGCTGG-CTGGCTGCCAGTGCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117367 35 - 187378091 CCAAAAGGAATGGGGCTGG-CTGGCTGCCAGTGCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 469894 35 - 91754291 CCAAAAGGAATGGGGCTGG-CTGGCTGCCAGTGCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 981500 33 - 74750902 TCAAAAGTGCAGGGGCTGG--TGGCTGCCCATCCC- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29109810 31 + 31377067 ----TGGGAATGGGCCTGACCTGTCTCCTCTTGCC- i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=233410.000000 s hg38.chr3_KI270935v1_alt 179261 178 + 197351 CAGCAGCTGCCCTGTGGGGGTGGGGGCTGCCCACCCGCCCTTGGTGACTGCTT-TTCCTGCCAAGGCCCTGGTCATGCCCGGTCAGATGTGTGGGTGCCATCTCCCAGCCACGACCATCTCCTCTCCTGGCCCAGCTCCACTTGGTCCCCTTAGCGACGCAAAGGACTCAGCGCTCCAC s rheMac3.chrUn_JH291127 89229 177 + 111706 CAGCAGCTGCCCTGT-GGGGTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TTCCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTGTGGGTGCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGCTCCTCTTGGTCCCCTTAACGACGCAAAGGACCCAGCGCTCCAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120313 177 + 192460366 CAGCAGCTGCCCTGT-GGGGTGGGGGCCGCCTGCCCACCGTTGGTGACTGCTT-TTCCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTGTGGGTGCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGCTCCTCTTGGTCCCCTTAACGACGCAAAGGACCCAGCGCTCCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117402 177 - 187378091 CAGCAGCTGCCCTGT-GGGGTGGGGGCCGCCTGCCCACCATTGGTGACTGCTT-TTCCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTGTGGGTGCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGCTCCTCTTGGTCCCCTTAACGACGCAAAGGACCCAGCGCCCCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 469929 177 - 91754291 CAGCAGCTGCCCTGT-GGGGTGGGGGCCGCCTGCCCACTGTTGGTGACTGCTT-TTCCTGCCAAGGCCCTGGTAATGCCCGGTCAGATGTGTGGGTGCCATCTCCCGGCCACTGCCACCTCCTCTCCTGGCCCAGCTCCCCTTGGTCCCCTTAACGACGCAAAGGACCCAGCGCTCCAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 981533 173 - 74750902 CAGAAGCTGCCCTGA-GGCGTGGAGGCTGCCTGTTGGCCCTTGGTGACTGCTT-TTCCTGCCAATGCTCTGGTAATGCCCCGTCAGATGTGTAGATGCCACCTTCCAGCCAC-ACCACCTCTGCTCCTGGACCAGCTCCACTTGGTCCCCTTA---ACTCGAAGGGCTCCGCACTCCAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29109841 176 + 31377067 CAGAAGCTCCCTGGG-ACCCGGGGGGCTAGGTAGTGTCCTGCGGAGACTGTTTCCTCCCTCCCATGTCCCCCAAATGCTCAGTCACGTGCTTGGGGCAGCACTTCCCCCCAC-GCCCCCGTCCTCCCAGGTCCGGCTCCGTCTTGTCCCCTCAACAGTGCACAGGCCCCAGCAC-CCAG i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I e panTro4.chr3 199817001 387 + 202329955 M a score=415260.000000 s hg38.chr3_KI270935v1_alt 179439 253 + 197351 GACATGCC--TAGCTTCTTCGGGTCGTCATGGAGACGCCCTTGCACACCAACAGTCCTTCACTCCTTCTCCGGGTCACGCCCCCGTG---------------CTTTTCCACGCCCACCCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCACTTCCTGGCTC--------------------CACATG--------------------GAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AGATTTGGAAAC-TCAAGAACTTGGGCGTCAGGAGGTCCAACCGT s panTro4.chr3 199817392 253 + 202329955 GACATGCC--TAGCTTCTTCCGGTCGTCACGGAGACGCCCTTGCACACCAACAGTCCTTCACTCCTTCTCCGGGTCACGCCCCCGTG---------------CTTTTCCACACCCACTCCAGGTCTTGCCCCTCTGCGCTCCTCTCCACAGACCCCACTTCCTGGCTC--------------------CACGTG--------------------GAGCTGAGTGTCCAGCTGGTACCCAGCACATTTGGGCTCAGCTTTAAATCAC-AGATTTTGAAAC-TCAAGAACTTGGGCGTCAGGAGGTCCAGCCGT i panTro4.chr3 M 387 C 0 s rheMac3.chrUn_JH291127 89406 251 + 111706 GGCATGCC--GAGCTTCTTCGGGTCGCCGTGGAGATGCCTTTGCACACCAGCCGTCCTCCACTCCCTCTCGGGGTCATG-CCCCGTG---------------CTTTTCCACGCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCGCTTCCTGGCTC--------------------CACATG--------------------GAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCAC-AGATTTTGAAAC-TCAAGAACTTAGGCATCAGGAGGTCAAGCCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120490 251 + 192460366 GGCATGCC--GAGCTTCTTCGGGTCGCCGTGGAGATGCCTTTGCACACCAGCCGTCCTCCACTCCCTCTCGGGGTCATG-CCCCGTG---------------CTTTTCCACGCCCACCCCGGGTCTTGCCCCTCTGGACTCTTCTCTACAGACCCCGCTTCCTGGCTC--------------------CACATG--------------------GAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGCGGTCAGCTTTAAATCAC-AGATTTTGAAAC-TCAAGAACTTAGGCATCAGGAGGTCAAGCCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117579 250 - 187378091 GGCATACC--TAGCTTCTTCGGGTCGCCATGGAGATGCCTTTGCACACCAGCCGTCCTCCACTCCCTCTCGGGGTCATG--CCCGTG---------------CTTTTCCACGCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCGCTTCCTGGCTC--------------------CACATG--------------------GAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTGAATCAC-AGATTTTGAAAC-TCAAGAACTTAGGCGTCAGGAGGTCAAGCCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 470106 251 - 91754291 GGCATGCC--TAGCTTCTTCGGGTTGCCATGGAGATGCCTTTGCACACCAGCCGTCCTCCACTCCCTCTCGGGGTCATG-CCCCGTG---------------CTTTTCCACGCCCACCCCGGGTCTTGCCCCTCTGGACTCCTCTCTACAGACCCCGCTTCCTGGCTC--------------------CACATG--------------------GAGCTGAGTGCCCAGCTGGTACCTAGC-CATTTGTGGTCAGCTTTAAATCGC-AGATTTTGAAAC-TCAAGAACTTAGGCGTCAGGAGGTCAAGCCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 981706 259 - 74750902 GGTGTGCCTATAGCTTCTTCGGGTTGTCACGGAGATGCCCTTCCACATTTAGAGTCCTTCACTCCTTCTCCAGGTCTTA-------------------------------CCCCTACCCCAGGACTTGTCCCTCTGGGCTTCTCGTGACAGACCCTGCTGCCTGGCCCCTGTGGAGTTTGATGACCCTCACATG--------------------GGGCTGAGTGTCCAGCTGGCACCTAACACATTTGGAGTCAGCTTAAAATCAC-AGATTCTGAAAC-TCAAGAACGTAGGGGTCAGGAGGTCAACCCAT i calJac3.chr17 C 0 I 311 s canFam3.chr33 29110017 269 + 31377067 GCCGTCCCTGTGCCTCTTCCAGGTCCTCA-------GCTTC---------ATGGTCCTTTACTCCTTCTCTTGCGCATG-CCCTGTGGCCCCCGGGGCTGTTCCTGCCCACCCCAACCCCAGTTCCTG-CTCTCTGGGCTTTTCTCCACAAACTC-----CCTGGCTC--------------------CTCTTGTTCAAGAGACTCCTGAGGCAAGGCTAAGTGCAGAGCTGGGGCTGAACACTTTTTCTGTTGACTTCACatcccaagatagcaaaactttaagaactcgggaatccagaggttatgccac i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=171386.000000 s hg38.chr3_KI270935v1_alt 179692 85 + 197351 TCACCA--CTGCTTTTTACACAGGGGACCGGGGCCCTGGGGAGACACGGGGC---AGGGCCTGGTCACAGGGGCCAGAACAGTTCACGGC----- s panTro4.chr3 199817645 85 + 202329955 TCACCA--CTGCCTTTTACACAGGGGACCGGGGCCCTGGGGAGACACGGGGC---AGGGCCTGGTCACAGGGGCCAGAACAGTTCATGGC----- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 89657 85 + 111706 TCACCA--CGGCTCTTTACACAGGGGACCAGGGCCCTGGGGAGACACGGGGC---GGGGCCTGGTCACGGGGACCATAACGGTTCATGGC----- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120741 85 + 192460366 TCACCA--CGGCTCTTTACacaggggaccggggccctggggagacacggggc---ggggcctggtcacggggaccATAACGGTTCATGGC----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117829 85 - 187378091 TCACCA--CGGCTCTTTACACAGGGGACCGGGGCCCTGGGGAGACACGGGGC---GGGGCCTGGTCACGGGGACCATAACGGTTCATGGC----- i papAnu2.chr2 C 0 M 549 s chlSab2.chr15 470357 85 - 91754291 TCACCA--CGGCTCTTTACACAGGGGACCGGGGCCCTGGGGAGACACGGGGC---GGGGCCTGGTCACGGGGACCATAACGGTTCATGGC----- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982276 85 - 74750902 TCACCA--CTGCTTTTTGCACAGGGGACCGGGGGCCTGGGGAGTCTCAGGGC---AGGGCCTGGTCACAGGGGCCAGAACAGTTCATGGC----- i calJac3.chr17 I 311 C 0 s canFam3.chr33 29110286 95 + 31377067 tcatcaccctactttttatataggggaaccggagcctggagagagaggggaccagagggcccggacatagcaaccagatcagttagtggcacggc i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=84622.000000 s hg38.chr3_KI270935v1_alt 179777 62 + 197351 AAAGACTTGGCCCTGGGGCTCCTAAATCCAAGCTGC---CTCCCCGGCGCCCCAAGCCCCAGCCT s panTro4.chr3 199817730 62 + 202329955 AAAGACTTGGCACTGGGGCTCCTAAATCCAAGCTGC---CTCCCCGGCGCCCCAAGCCCCAGCCT i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 89742 62 + 111706 AAAGACTTGGCACTGGGGCTCCTAAATGCGAGCTGC---CTCCGTGCCACCCCAACCCCCAGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120826 62 + 192460366 AAAGACTTGGCACTGGGGCTCCTAAATGCGAGCTGC---CTCCGTGCCACCCCAACCCCCAGCCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 470442 62 - 91754291 AAAGACTTGGCACTGGGGCTTCTAAATGCGAGCTGC---CTCCCTGGCACCCCAACCCCCAGCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982361 62 - 74750902 AAAGACTTGGCACTGGGGCTCCTACATCCAAGCCGC---CTGCCTGGTGCCCCAACCCCCAGCCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29110381 65 + 31377067 caagtctgggccccaaggcccctaaatccaagttaccatctccccattgcCTAAGGCCAATGCCT i canFam3.chr33 C 0 I 26 e mm10.chr16 65468729 1765 - 98207768 I e papAnu2.chr2 117914 549 - 187378091 M e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=46742.000000 s hg38.chr3_KI270935v1_alt 179839 47 + 197351 CGCTCTGGGAGTCATGATTCCCGTGGAGACTCCTTCAACCACATCTG s panTro4.chr3 199817792 47 + 202329955 CGCTCTGGGAGTCATGATTCCCGTGGAGACCCCTTCAACCACATCTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 89804 45 + 111706 CGCTCTGGGAGTCGCGATTCCCATGGAGACCCCTTCAAC--CATCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120888 45 + 192460366 CGCTCTGGGAGTCGCGATTCCCATGGAGACCCCTTCAAC--CATCTG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 470504 45 - 91754291 CGCTCTGGGAGTCGCGATTCCCATGGAGACCCCTTCAAC--CATCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982423 38 - 74750902 TGCTCTGGGAGCCGTGATTCCCATGGAGG-------AAT--CCACTG i calJac3.chr17 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e canFam3.chr33 29110446 26 + 31377067 I e papAnu2.chr2 117914 549 - 187378091 M e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=235422.000000 s hg38.chr3_KI270935v1_alt 179886 255 + 197351 CAGGGCAGGGCCGTGTGGCGGCTCCTTCCGGCCTCCACGTCCTCACGGTGGGATG---AGCACTGGAGCGGGGTTGTGTGGCCAGGGTGGGGTGGGGGTGCTGGAGGGTGGGGAGGTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTAGTCCTGAAACATCCCGAGGTGG--AAGGGTCCGCTTCACCAGCATGGCTTCTCTTGCAGCCTTTAAACGGCACTCGCCTTCTGACTCACTCCCAGGAAGCTCCTC s panTro4.chr3 199817839 255 + 202329955 CAGGGCAGGGCCGTGTGGCGGCTCCTTCCGGCCTCCACGTCCTCACGGTGGGATG---AGCACTCGAGCAGGGTTGTGTGGCCAGGGTGGGGTGGCGGTGCTGGAGGGTAGGGAGGTGTAGGGAGGTGGTGGCAGTTTCCTTTGCCCTCAGCCTAGTCCTGAAACATTCCGAGGTGG--AAGGGTCCACTTCACCAGCATGGTTTCTCTTGCAGCCTTTAAACGGCATTCACCTTCTGACTCACTCCCAGGAAGCGCCTC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 89849 215 + 111706 CAGGGCGAGGCCGTGTGGCGGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATG---AGCACTCAAGCGAGGGTATGTGGCCGGGGTGGGGTGGGGGTGC----------------------------------------TTGTCCTGAGCCAAGTCCTGAAACATTTTGAGATGG--AATGTTCCACTTCACCAGCCCGGTTTCTCTTGCAGCCTTTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGTGCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 120933 215 + 192460366 CAGGGCGAGGCCGTGTGGCGGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGATG---AGCACTCAAGCGAGGGTATGTGGCCGGGGTGGGGTGGGGGTGC----------------------------------------TTGTCCTGAGCCAAGTCCTGAAACATTTTGAGATGG--AATGTTCCACTTCACCAGCCCGGTTTCTCTTGCAGCCTTTACAGGACATTCCCCTTCTGACCCACTCCCAAGAGGTGCCTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 470549 215 - 91754291 CAGGGCGAGGCCGTGTGGCGGCTGCTTCTGGCCTCCATGTCCTCACAGTGGGGTG---AGCACTCGAGCGAGGGTATGTGGCCGGGGTGGGGTGGGGGTGC----------------------------------------TTGTCCTGAGCCAAGTCCTGAAACATTTTGAGATGG--AATGTTCCACTTCACCAGCCTGGTTTCTCTGGCAGCCTTTACAGGGCATTCCCCTTCTGACCCACTCCCAAGAGGCGCCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982461 235 - 74750902 CAGGGCAAGGGCATGTGGTGGCTCCTTCTGGCCTCCACCTCCTCAGCATGTGGTG---AGCATTCACTCGGGG-CGTGTGGCTGGGGTGGGGTGGGGGTGCTGGAGG----------GTAGGGAGGTGGTGGTAGTTCCCTTTGAGCTCAGCCGAGTCCTGGAAAACCTCAAGGTGG--AATG-TCCGTTTCAGCAGCGT--------TTGCGGCCGTTACAGGGCATTCGCCTTCTGACTCACTCCCAAGGAACTCCGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29110472 223 + 31377067 CACCGCAGGCCC---TGGAGCCTCCTTCTGGCCT-----TACTCTGAGCAGGCTGGCTAGGGACGAAGGGGGCCTGTGCGGT---GGAGGGCTGGAGGGTC------------------GGGGAGGCCGTAGCTGTTTCACTTGCTCTCAGCCAAGCCCTTATGCATTTCGAGGAAGGCAGGACACTCCTGCACCAGCACTGCGTCTCCTACCAGCTGGA-AGAGCATATTCCTTCCGACCCTCTCCCGAGAA------- i canFam3.chr33 I 26 C 0 e mm10.chr16 65468729 1765 - 98207768 I e papAnu2.chr2 117914 549 - 187378091 M e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120935690 4997 + 123690457 I a score=22483.000000 s hg38.chr3_KI270935v1_alt 180141 19 + 197351 AAATATGCGCCC----AAGAAAT s panTro4.chr3 199818094 19 + 202329955 AAAAATGCGCCC----AAGAAAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120940687 19 + 123690457 aaaTATTCGCCC----AAGAAAT i nomLeu3.chr11 I 4997 C 0 s rheMac3.chrUn_JH291127 90064 19 + 111706 GAAAATGCGCCC----AAGAACC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 121148 19 + 192460366 GAAAATGCGCCC----AAGAACC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 470764 19 - 91754291 GAAAATGCGCCC----AAGAACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982696 19 - 74750902 AAAGATGCTCCC----AAGAACT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29110695 17 + 31377067 ----AGGAGCCCTTGGGTGAA-- i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e papAnu2.chr2 117914 549 - 187378091 M e ponAbe2.chr3 199829116 6447 + 202140232 M a score=33391.000000 s hg38.chr3_KI270935v1_alt 180160 24 + 197351 ATTTTCCCTCGGCGACTG--TTCTTA s panTro4.chr3 199818113 24 + 202329955 ATTTTCCCTCGGCGAATG--TTCCTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120940706 24 + 123690457 ATTTTCCCTTGGCGAATG--TTCCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 90083 24 + 111706 ACTTTCCTTTGGTGGATG--TTTCCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 121167 24 + 192460366 ACTTTCCTTCGGTGGATG--TTTCCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118463 24 - 187378091 ACTTTCCTTCGGTGGATG--TTTCCG i papAnu2.chr2 M 549 C 0 s chlSab2.chr15 470783 24 - 91754291 ACTTTCCTTCAGTGGATG--TTTCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982715 26 - 74750902 GCTTTCCTTCAACGAAAGGCTTCCCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29110712 18 + 31377067 GGCTTCCCCAGGCCCGTC-------- i canFam3.chr33 C 0 C 0 e mm10.chr16 65468729 1765 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=1273899.000000 s hg38.chr3_KI270935v1_alt 180184 692 + 197351 GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCTAACCCCAGCTTGAACT-------------------CTGGACCCCAGACTCT-CCCCCA-AAGACTCAGACACCCAGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAGTGTGGGGAAGAGGAC--GGGGGCCCCCGAG--GG-AACATCTCCCACAGGCCTGGCATCCCTCCCCTCCCAGCTCTGTA---------CACGGAGGAGCCCAAGGCCAATGCCGGGGCTACGAGCCCCAGGC--AAGGCCGTGACCCAAATGGAGGC-----TTTTAAACCCGAGCTCAGAGGTAAGAAGCCCACGGCCAGCACCTCCCGGCCCTCTGCGCCCTGGCC--GCCTCC-TCCGCACCACCCTCCC--GGCC---------------------------------------------------------------------GGCCTGCCCCTCTCCTCCTTGTCGCTTCCCTTGCTTGCTGCTGTCTCCCGATCTTCTCCTCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGCGTCTCACCTGTCTCGTCCTCTCACCCTGCAGCTTTACATGAG-TTTTCTTCC-G----TCTCCATCACCCAGCTTTCCTGGCATCCCCTCTACCCCCAGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTCCTCTTGCTCTGGCTCTGCCTGTCTTTCTCTCTGCG---AGTAAGCCTGGGCTCTCA---CCATGGATCCTTCCAGACATCGCCGGGCTGctctctggccc s panTro4.chr3 199818137 692 + 202329955 GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCGAACCCCAGCTTGAACT-------------------CTGGACCCCAGACTCT-CCCCCA-AAGACTCAGACACCCCGAAACACAGAATAAAACTTGGTCCTGAAGCCAGAGGGACAGCCTGGAAAGTGTGGGGAAGAGGAC--AGGGGCCTCCAAG--GG-AACATCTCCCACAGGCCTGGCATCCCTCCCCTCCCAGCTCTGTA---------CACGGAGGAGGCCAAGGCCAATGCCAGGGCTACGAGCCCCAGGC--AAGGCCGTGACCCAAATGGAGGC-----TTTTAAACCCAAGCTCAGAGGTAAGAAGCCCACGGCCAGCACCTCCCGGCCCTCTGCGCCCTTGCC--GCCTCC-TCCGCACCACCCTCCC--GGCC---------------------------------------------------------------------GGCCTGCCCCTCTCCCCCTGGTTGCTTCCCTTGCTTGCTGCTGTCTCCTGATCTTCTCCTCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGCCTCTCACCTGTCTCGTCCTCTCATCCTGCGGCTTTACATGAG-TTTTCTTCC-G----TCTCCATCACCCAGCTTTCCTGGCATCCCCTCTACCCCCAGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTCCTCTTGCTCTGGCTCTGCCTGTCTTTCTCTCTGCG---AGTAAGCCTGGGCTCTCA---CCATGGACCCTTCCGGACATCGCCGGGCTGCTCTCTGGCCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120940730 708 + 123690457 GCCTGCTGAGAGGCAGGGCAGGAGCTGAGACTCTAACCCCAGCCTGAACTCCAGACCCCTTACCCTATCCTGGACCCCAGACTCTCCCCCCA-AAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCTGAAGCCAGACGGACAGCCTGGAAAGTGTGAGGAAGAGGAC---GGGGCCCCCGAG--GG-AACGTCTCCCACAGGCCTGGCATCCCTCCCTTCTCAGCTCTGTA---------CACGGAGGAGGCCAAGGCCAATGACAGGGCTACGAGCCCCAGGC--AAGGCCGTGACCCAAGTGGAGGC------TTTAAACCCAAGCTCAGAGGTAAGAAGCCCA----CCGCACCTCCCGGCCCTCTCCGCCCT-GCC--GCCTCC-TCCGCACCGCCCTCCC--GGCC---------------------------------------------------------------------GGCCTGCCTCTCTCCTCCTTGTCGCTTCCCTCGCTTGCTGCTGTCTCCTGATCTTCTCATCTCTCCATTCCCAGGGT-CCTCAGTTTGTCTGTCTCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATAAGAG-TTTTCTTCC-AGAATTCTCCATCACCCAGCTTTCCTGGCATCCCCTCTACCCCTGGCTCTGTACACAAGGGTGTACATCTTTCTCCTTGACTCTG---TTCCTCTTGCTCTGGCTCTGCCTGTCTTTCTGTCCGCG---AGTAAGCCTGGGCTCTCA---CCATGGGTCCTTGCAGACATCATC-GGCTGctctctggccc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 90107 772 + 111706 GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGAACTCTGGCTTCAACTCTGGACCCCTCACCCTCTCCTGGACCCCAGACGCT-CCCCCA-AAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCCCGGAG--GG-AACGTCTCCCACAGGCCTGGCATCCCTTCCCTGCCGGCTCTGTA---------CATGAAGGAGGCCAAGGCCAGTGCCA-GGCTGCGAGCCCCAGGC--AAGGCCGTGACCCAGGTGAAAGC-----TTTTAAACCCAAGCTCAGAGGCAAGAAGCCCACGGCCAGCACCTCCTGGCCCTCTCCGCCCT-GCC--GCCTCC-TCCACACCGCCCT-CC--AGCCGGCCTGCCTCTCCTCCTTGTCGCTTCCCTCGGTTGCTGCTGTCTCCTTCCTCCACACCACCCTCCAGCTGGCCTGC--CTCTCCTCCTCGTCGCTTCCCTCGGTTGCTGCTGTCTCCCGATCGTCTCCTCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTCTCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCC-G----TCTTCATCACCCAGCTTTCCTGGCAT-CCCTCCACCCC-GGCTCTGTACACGG-GGTGTGCATCTTTCTCCTCGACTCTG---TTCCTCTTGCTCCGGCTCTGCCTGTCTTTCTCTCCGCG---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGCTGCCCTCTGGTTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 121191 705 + 192460366 GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGAACTCTGGCTTCAACTCTGGACCCCTCACCCTCTCCTGGACCCCAGACGCT-CCCCCG-AAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCCCGGAG--GG-AACGTCTCCCACAGGCCTGGCATCCCTCCCCTGCCGGCTCTGTA---------CATGGAGGAGGCCAAGGCCAGTGCCA-GGCTGCGAGCCCCAGGC--AAGGCCGTGACCCAGGTGAAAGC-----TTTTAAACCCAAGCTCAGAGGCAAGAAGCCCACGGCCAGCACCTCCTGGCCCTCTCCGCCCT-GCT--GCCTCC-TCCACACCGCCCT-CC--AGCC---------------------------------------------------------------------GGCCTGC--CTCTCCTCCTCGTCGCTTCCCTCGGTTGCTGCTGTCTCCCGATCGTCTCCTCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTCTCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCC-G----TCTTCATCACCCAGCTTTCCTGGCATCCCCTCCACCCT-GGCTCTGTACACAGCGGTGTGCATCTTTCTCCTCGACTCTG---TTCCTCTTGCTCCGGCTCTGCCTGTCTTTCTCTCCGCG---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGCTGCCCTCTGGTTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118487 703 - 187378091 GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCAAACTCTGGCTTCAACTCCGGACCCCTCACCCTCTCCTGGACCCCAGACGCT-CCCCCG-AAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCCCGGAG--GG-AACGTCTCCCACAGGCCTGGCATCCCTCCCCTGCCGGCTCTGTA---------CATggaggaggccaaggccagtgccA-GGCTACGAGCCCCAGGC--AAGGCCGTGATCCAAGTGAAAGC-----TTTTAAACCCAAGCTCAGAGGCAAGAAGCCCACGGCCAGCAcctcctggccctcgccgccct-gcc--gcctcc-tccacactgccct-cc--agcc---------------------------------------------------------------------ggcctgc--ctctcctcctTGTCGCTTCCCTCGGTTGCTGCTGTCTCCCGATCGTCTCCTCTCTCCATTCCCAGGGTGTGTCAGTTTGTCTGTCTCTCACCTGTCTCGTCCTCTCACCCTGTGGCTTTATTTGAG-TTTTCTTCC-G----TCTTCATCACGCAGCTTTCCTGGCGTCTCCTCCACCCC-GGCTCTGTACACAGGGCTGTGCATCTTTCTCCTCGA--CTG---TTCCTCTTGCTCTGGCTCTGCCTGTCTTTCTCTCCGCG---AGTAAGCCCTGGCTCCCT---CCACAGATCCTTCCAGACATCGCCGGGCTGCCCTCTGGTTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 470807 683 - 91754291 GCCTGCT--GAGGCAGGGCAGGAGCTGAGACTCGAACTCTGGCTTCGACTCCAGACCCCTCACCCTCTCCTGGACCCCAGACGCT-CCCCCG-AAGACTCAGACACCCAGAAATACAGAATGAAACTTGGTCCCGAAGCCAGAGGGGCAGCCTGGAAGGTGTGGGGAAGAGGACT-GGGGGCCCCGGAG--GG-AACGTCTCCCACAGGCCTGGCATCCCTCCCCTGCCGGCTCTGTA---------CATGGAGGaggccaaggccagtgcca-ggctacgagccccaggc--aaggccGTGACCCAGGTGAAAGC-----TTTTAAACCCAAGCTCAGAGGCAAGAAGCCCACGGCCAGCACCTCCTGGCCCTCTCC--------------------------GTCCT-CC--AGCC---------------------------------------------------------------------GGCCTGC--CTCTTCTCCTCGTCGCTTCCCTCGGTTGCTGCTGTCTCCCGATCGTCTCCTCTCTCCGTTCCTAGGGTGTGTCAGTTTGTCTGTCTCTCACCTGTCTCGTCCTCTCACCCTGCGGCTTTATTTGAG-TTTTCTTCC-G----TCTTCATCACCCAGCTTTCCTGGCATCCCCTCCACCCC-GGCTCTGTACACAGGGGTGTGCGTCTTTCTCCTCGACCCTG---TTCCTCTTGCTCTGGCTCTGCCTGTCTTTCTCTCCGCG---AGTAAGCCCTGGCTCCCT---CCATAGATCCTTCCAGACATCGCCGGGCTGCCCTCTGGTtc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 982741 621 - 74750902 TCCGGCT--GAGAC------------------------------TTAACTCCTGACTCCTCACGCTCTCCTGGACCCCACACACT-CCCCCAGAAGCCTCTGACACCCAGAAATACAGCAGGAAGCTTGATCCTGAAGCCAGAGGGACAGCCTGAGAAGTGCTGGGAGGAGGTCTGGGGGGCGCCAGAG--GGAAACGTCCCCCGCAGGCCCTGCATCCC-CCGTCCCTGGCTCTGCATGGAA--GGCATGGAGGGGGCCGAGGCCAAGGCCAGGGCTATGAGCCCCACAC--AAGGCC-TGACCCCAGCAGAGGC------TCTAACCCCAGGCTCAGAGGTGAGAAGCCTGTGGCCAGCCTCCCCCAGGCCTCCCAGCCCT------GCCTCC-TCCTCACCGCCCT-CC--AGGCCGC------------------------------------------------------------------GGCCT----CTCTCCTCC-----GCTCCCTGCGGTT-CTGCCATCTCCTGGTCACCTCCTCT-------------GTGCTTCGGTACGTCTGTCTCTCCCTTGCCTCACCCTCTCGCGCTGCGGCTTTACCTGAGATTTTCTCCC-A----GGTCCATCAC-CAGCTTTCCTG-------------------------------------------TTTTCCTTGGCACCGTTTTTCCTCTTGCTACAGCTCTGCCTGTCTTTCTCTCCACG---AGGAAGCCTGGGCTCCCC---CCAGGGACCCTTCCAGACCTGGCCGGGCTTCTCTCTGG--C i calJac3.chr17 C 0 C 0 s mm10.chr16 65470494 605 - 98207768 GCTTGTT--GAGATTCTAGAGGGGCTCTCACTCTGACTTTGGTCTGGGCT------------------CCCAAGCCTCAG--CCT-TCCCAG-AACACTCAGACGCCCCTATGCACAGAATGAAACCCCAACTGGCAGTCAGGCCAGCAGCTGGGAAGGTGACAGGAAGGAGTCT-CAGGGACCTGGAG-----AACATCTCCAGCAGGCCCTGTG-CCCACCACCCTGAACCCTGGG---------CAT--AGGTATGCAAAGCCAAGGCT--GGC-----------AGC--ATGGTTTTGAAATAGCAGGAGGCTGGGTTTTTGAGAC--AGCTCACTGAC----------TGCTCTGAGCATCTCAGCTGCCTCTGCCCACGCCCGGCTTTCGTTCCCACCATCCT-CCAAAACC---------------------------------------------------------------------GACCCAC--CTC------------CTTCCTTT-----CTTCTA-----CAATTTTCTCCTTT----ATGGCCACATT-CTTTAGCTCATTTATTTCTCACCCATCTTGTTTTCTGCTGTGACATCTCTGTAAGAG-TTCTCTTTT------TCTCCTGTGAGCAGATTTTCTGATTTTCCCTTTA-----GAGTCT------------------------------CTCCA---ACTCTCTCACTATGGTCCTGCCTCTTTCACTTTCTATGTAAATGAAGTTCTGGTCCCCTTCACCATAGGTTCCCCAAG------CCAGGCCACCTTTTGCCCC i mm10.chr16 I 1765 I 7 s canFam3.chr33 29110730 410 + 31377067 ---------GAGGAGGGGAACGAGCTGCCATTATTTCTTTGATTTGGGCTTCTGGCCCCTCATCCTCTCTGGGCCGCCAGA-GCC-TCACAG-AAGACCCTGACACCCGGAAATACA--------CCCCCCTCTG--------------GCTCGG--GGTGCGGGGGCGGAG----AGGGGCTCGGCAGGTGG-AGCTTCCCCAGCCGGCCTTGCTCCCAGCCCTCACCGG------AGGGAAGCGGCCCGCGGGAGGCCAAGACCAACAGAG-GCCTGTGCGCCCTGCCCCGAGGGCCGC-AGTCGGGAGGAGGC-----TGCTCAGTCCCAGGTCAGGGGCCAGAAGCCAACCGCTG------------------------------GGCGCC---------------TC--AGCG---------------------------------------------------------------------GGCCTCT--GTCCCGGCCTGGTGGC-----------------------------------------------------------------------------------------------------------GAG-CCCGCTGCCTG----TGTCC-----------TTCTTGGCCTCTCC---------------------------------------------CTCCA---GGCCTGCGGCCTC--CTCCGCCTGTCCCCTTCCC--------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 199829116 6447 + 202140232 M a score=274117.000000 s hg38.chr3_KI270935v1_alt 180876 171 + 197351 tctgttctcttttctctctctttcgagcattctccctctgtctttcccctcagatcttgtcccgtatctgccagttcatgcct-cctcttccccacttttctcctcttcttattttttatttta--ttttatatttatttatttatttatttatttattta--------------tttatttattt-at s panTro4.chr3 199818829 151 + 202329955 TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCCCTCTGCCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAGTTCATGCCT-CCTCTTCCCCACTTTTCTCCTCTTCttattttttatttta--tttta--------------------tatttattta--------------tttatttattt-gt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120941438 147 + 123690457 tctgtcctcttttctctctctctccagcattctccctctgtctttcccctcagatcttgtcctgtatctgccagttcacgcct-cctcttccccacttttctcctcttctcatttttaatttta--tttta------------------------tattta--------------tttactcattt-at i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 90879 142 + 111706 TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTCACACCT-cctcttccccacttttcccctcttcttatttc----ttat--ttatt------------------------tattta--------------tttatgtatttaat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 121896 146 + 192460366 TCTGTCCTCTTTTCTCTCTCTTTCGAGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTCACACCT-CCTCTTCCCCACttttcccctcttcttatttcttatttat--ttatt------------------------tattta--------------tttatttatttaat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119190 146 - 187378091 TctgtcctcttttctctctctttcgaGCATTCTCC--CTGTCTTTCCCCTCAGATCTTGTCCCGTATCTGCCAATTCACACCT-CCTCTTCCCCACTTTTCCCctcttcttatttcttatttta--ttatt------------------------tattta--------------tttatttatttaat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 471490 145 - 91754291 tctgtcctcttttctctctctttcgagcattctct--ctgtcctt-ccctcagatcttgtcccgtatctgccaattcacacct-cctcttccccactcttcccctcttcttatttcttatttta--ttatt------------------------tattta--------------tttatctatctaat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 983362 146 - 74750902 TCTGTCCTCTCT--TCTGTCTTTCAAGCATTCTCA-----TCTTTCTGCTCACACCTTGTCCTGTACCTGCCAATTCACACCT-CCTCTTCCCCAC---------CCTCTTCTTTTTTATTTGAATTGATT------------------------TATTTGAGATGGAGTCTCACTCTGtttgttt--g i calJac3.chr17 C 0 C 0 s canFam3.chr33 29111140 122 + 31377067 ------CTCctctctctctctctc------tctct--ctctctACCCCCTCACGTTGATTCCTCTAC-------TTCTCACCTGTCTTTTCCTCTGACTCTGCATCTTCTTTtttttt-tttaa--gattt------------------------tattta--------------tttattcat----- i canFam3.chr33 C 0 I 209 e mm10.chr16 65471099 7 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=590944.000000 s hg38.chr3_KI270935v1_alt 181047 277 + 197351 tttgagacagagtctcgctctctctcccaggctggagtgc-agtggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagactcctgagtagctggaattacaggtggggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgccttggcctccgaaagtgctgggattacaggcatgagccaccgcg s panTro4.chr3 199818980 277 + 202329955 tttgagacagagtctcgctctctctcccaggctggagtgc-agtggcgcgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagactcctgaatagctggaattgcaggtgcggcccaccacgaccggctaatttttgtatatttagtagagacggggtttcaccatgtcggccaggctggtctcgaactcctgacctcaggtgat-ctcctgcctcggcctccgaaagtgccgggattacaggcgggagccaccgcg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120941585 278 + 123690457 tttgagacagagtctcgctgtctctcccaggctggagtgcaagtggcgtgatctcagctcactgcaacctccacctcctgagttcaagtgattctcctgcctcagcctcctgagtagctggaattacaggcacctgccaccacgcccggctaatttttgtatatttagtagagatggggtttcaccttgttggccaggctggtgtcaaactcctgacctcaggtgat-ggcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 91021 275 + 111706 tttgagacagagtctcactctctctcccaggctggcgtgc-agtggcgcaatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacctcagcctcctgagtagctggaattacacgcatgtgccatcacgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtagt-cgcccgcctcagcctcccaaagtgctgggatgacaggcgtgagccac--cg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 122042 275 + 192460366 tttgagacagagtctcactctctctcccaggctggcgtgc-aatggcgcaatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacctcagcctcctgagtagctggaattacacgcatgtgccatcacgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtagt-cgcccgcctcagcctcccaaagtgctgggatgacaggcgtgagccac--cg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119336 273 - 187378091 tttgagac--agtctcactctctctcccaggctggtgtgc-aatggcgcgatctcagctcactgcaaccttcacctcccgggttcaagcgattctcctacctcagcctcctgagtagctggaattacaggcatgtgccatcacgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtaat-cgcccgcctcggcctcccaaagtgctgggatgacaggcatgagccac--cg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 471635 275 - 91754291 tttgagacagagtctcactctctctcccaggctggcgtgc-aatgacgcgatctcagctcaccgcaaccttcacctcctgggttcaagcgattctcctacctcagcctcctgagtagctggaattacaggcatgtgccatcatgcccggctaatttttgtatattttgtagagacggggtttctccatgttggccaggctggtctcaaactcctgacctcaggtaat-cgcccgcctcggcctcccaaagtgctgggatgacaggcgtgagccac--cg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 983508 276 - 74750902 tttgagacggagtcttgctct-gccaccaggctggagtgc-agtggctccatctcggctcaccgcaacctctccctcccaggttcaagcaattct-ctgcctcagcctcctgagtagctgggactacaggtgtgcgccaccacacctggctaatgtttgtatttttagtagcgatggggtttcaccatgttggtcaggcttgtcttgaactcctggcctcaagtgatccacccgccttggcctcctgaagtgctgggattaaaggcttgtgccccggcg i calJac3.chr17 C 0 C 0 e mm10.chr16 65471099 7 - 98207768 I e canFam3.chr33 29111262 209 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=26300.000000 s hg38.chr3_KI270935v1_alt 181324 19 + 197351 cacggcctccactcttctt s panTro4.chr3 199819257 19 + 202329955 ctcggccTCCACTCTTCTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120941863 19 + 123690457 cccggcctccactcttctt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 91296 17 + 111706 tctggc--cctctcttctt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 122317 17 + 192460366 TCTGGC--Cctctcttctt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119609 17 - 187378091 tctggc--cctgtcttctt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 471910 17 - 91754291 tctggc--cctctcttctt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 983784 19 - 74750902 ccaagccTCCCCTCTTCGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29111471 19 + 31377067 AGCAGCCTCCCTCCTCCTC i canFam3.chr33 I 209 C 0 e mm10.chr16 65471099 7 - 98207768 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=2223130.000000 s hg38.chr3_KI270935v1_alt 181343 891 + 197351 tctctctccctcttctcttcctcttc-tttccctctctgggtctctct---------ccaccttccccccatgttgtc---ccattcatctc-----tttctcctttccctctccctctttt--tctctcccttctcttcctcttcgctg---tctccctttcccctattctctctctctctctctctgtctcCCCGGAC--CTCTTTCTCTGA---CAGCTCCCACCTCCCCCAAGTGCTCCCCGCAGCCAGCCTCATCTGCTGTCTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGCCCCCTTCATGGCTGCGGCAAAAGTCCCCCTGGCTCCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCA-GTGTGAGGAGCAGACGTGAGCCCGTCCCCTCAGGCGGCT--GGCCCGAACCAAGTGCGTTTCTCCGAAGGGGCCA----GGGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACGCTAAT----------CACC---------CTTTTCTCTCCTCAG-CCCCACCC---------CACTACCCCACCAGGAA----AGAA------AACACCGATACACCCGTTGCTCTGCTTCTCATCAGCCTGAG-CTGAGTGGCGGGAGGGATGGGAGGAGACATG-----------GGGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTCCTAGCCG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------GAAGAAAGGGC--CCCAGAGGGAGCGACCTT-GGGGCTGTATGAA-TGGGGGAAAGAGAGTGAGACTTAAGCAGACCCCAAGGAA----TTGGGAAGC--GGGGAACCATGTGGG-TGAGGGGCAGGAA-CAGAAATGCACTGTATGC s panTro4.chr3 199819276 863 + 202329955 TCT-----------------------------CTCTCTGGGTCTCTCT---------CCACCTTCCCCCCATGTTGTC---CCATTCAtctc-----tttctcctttctctctccctctttt--tctcgcccttctcttcctcttcgctg---tctccctttcccctat--tctctctctctctctctgtctcCCCGGACCTCTCTTTCTCTGA---CAGCTCCCACCTCCTCCAAGTGCTCCCCGCAGCCAGCCTCATCTGCTGTCTC-----CATCACTTACCTGGGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGCCCCCTTCATGGCTGCGGCAAAAGTCCCCCTGGCTCCCTGGGGAAGCTCCACGGC-CCAGCAGCTGCA-GTGTGAGGAGCAGACGTGAGCCCGTCCCCTCAGGCGGCT--GGCCCGAACCAAGTGCGTTTCTCCGAAGGGGCCA----GGGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCCATGCTAAT----------CACC---------CTTTTCTCTCCTCAG-CCCCACCC---------CACTACTCCACCAGGAA----AGAA------AACACCGATACACCCATTGCTCTGCTTCTCATCAGCCTGAG-CTGAGTGGCGGGAGGGATGGGAGGAGACATG-----------GGGGAATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTCCTAGCTG-GGTTCC-TGGGTCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------GAAAAAAGGGC--CCCAGAGGGAGCAACCTT-GGGGCTGTATGAA-TGGGGGAAAGAGAGTGAGACTTAAGCAGACCCCAAGGAA----TTGGGAAGC--GGGGAACCATGTGGG-TGAGGGGCAGGAA-CAGAAATGCACTGTATGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120941882 887 + 123690457 tctctctccctcttctcttcctcttc-tttccctctctgggtctctct---------ccaccttccccccaggttgcc---ccattcatctc-----tttctcctttctctctccctctttttctctctctcttctcttcctcttcgctg---tctccctttcccctattctctctctctctcCCCCCCCCCCCCCGTACCTTTCTTTCTCTGA---CAGCTCCCACCTCCCCCAAGTGCTCCCTGCAGCCAGCCTCACCTGTTGTCTC-----CATCACTTACCCGTGACCACATGCGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGGCCCTCCTCCAGCGTGCCCCCCTCATGCCTGCGGCAAAAGTCCCTCTGGCTCCCTGGGGAAGCTCCACGGC-CCAGGAGCTGCA---GTGAGGAGCAGACGTGAGCCCGTCCCCTCCGGCGGCT--GGCCCGAACCAAGTGCGCTTCTCCGAAGGGGCCA----GAGAACCA--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACGCTAAT----------CACC---------CTTTTCTCTCCTCAG-CCCCACCC---------CACTCCCCCACCAGGAA----AGAA------AACACCGATACACCTATTGCTCCGCTCCTCACCAGCCTGAG-CTGAGTGGCAGGAGGGACGGGAGGGGAC--------------GAGGGATGGGAACAGGTCACACTGGAAATGGGTGGGCCACCCTCCTAGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTG-CCCTGTCCCA-CCAGAGCTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------GAAGAAAGGGC--CCCAGACAGAGTGACCTT-GGGGGTGTATGAA-TGGGGGAA--AGAGTGAGATTTCAGCAGACCCCAGGGAA----TTGGGAAGC--GGGGAACCATGTGGG-TGAGGGGCAGGAA-CAGAAATGCACTGTATGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 91313 891 + 111706 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctcccccCATGCTGT----CCATTCAtctc-----tttctcctttctctctctctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgttctctctctttctct--------cCCCGGACCTCTCTTTCTCTGA---CAGCTCCCAGTTCCCCCATGTGCTCCCCACAGCCAGCCTCACCTGCTCTCTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCTCCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCA-GTATGAGAAGCAGACGTGAGCCTGTCCCCTCCGGCGGCT--GGCCCGAACCAAGTGCGTTTCTCTGAAGGGGCCA----GAGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACACCAAT----------CAGG---------CTTTTCTCTCCTCAG-CCCCACCC---------CACTCCCCCACCAGGAA----AGAA------AATACCGGTGCACCCATTGCTCTGCTCCTCACCAGCCTGAGACTGAGTGGCAGGAGGGacgggaggagacacgggaggagacacgggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCCTCCTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------TAAGAAAGGGC--CGCAGAGGGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAGAGAGTGAGATTTACGCAGACCCCAGGGAA----ATAGGAAGCG-GGGGAACCATGTGGG-TGAGGGGCAGGAA-CAGAAA-----TGTACGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 122334 890 + 192460366 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt----ccattcatctc-----tttctcctttctctctctctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgttctctctctttctct--------ccccggacctctctttctctGA---CAGCTCCCAGTTCCCCCATGTGCTCCCCACAGCCAGCCTCACCTGCTCTCTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAGAGTTCCTCTGGCTCCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCA-GTATGAGAAGCAGACGTGAGCCTGTCCCCTCCAGCGGCT--GGCCCGAACCAAGTGCGTTTCTCTGAAGGGGCCA----GAGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCTACACCAAT----------CAGG---------CTTTTCTCTCCTCAG-CCCCACCC---------CACT-CCCCACCAGGAA----AGAA------AATACCGGTGCACCCATTGCTCTGCTCCTCACCAGCCTGAGACTGAGTGGCAGGAGGGacgggaggagacacgggaggagacacgggGGACGGGAACAGGTCACACAGGAAATGGGTGGGCCTCCCTCCTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCTGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------TAAGAAAGGGC--CGCAGAGGGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAGAGAGTGAGATTTACGCAGACCCCAGGGAA----ATAGGAAGCG-GGGGAACCATGTGGG-TGAGGGGCAGGAA-CAGAAA-----TGTACGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119626 887 - 187378091 tctttctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt----ccattcatctc-----tttctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgttctctccctttctct---------cccggacctctttttctctGG---CAGCTCCCAGTTCCCCCATGTGCTCCCCACAGCCAGCCTCACCTGCTCCCTC-----CATCACTTACCTGGGACCACACGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCTGCAAAAGTTCCTCTGGCTCCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCA-GTATGAGAAGCAGACGTGAGCCTGTCCCCTCCAGCGGCT--GGCCCGAACCAAGTGCGTTTCTCTGAAGGGGCCA----GAGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACACCAAT----------CAGG---------CTTTTCTCTCCTcag-ccccaccc---------cactcccccaccAGGAA----AGAA------AATACCGGTGCACCCATTGCTCTGCTCCTCACCAGCCTGAG-CTGAGTGGCaggagggacgggaggagacacgggaggagacacgggggacgggaacaggtcacacaggaAATGGGTGGGCCGCCCTCCTGGCTG-GGTTCC-TgggccctctcctccctccccaggggCGGCCCCTGTCCCA-CCAGAACTTTGGGCTGCT---------------------------------------GG---------GAAGAATGGG---------GAGGAAAGGGC--CGCAGAGAGAGCGACCTT-GCGGGTGTATGAA-GGGGGGAAAGAGAGTGAGATTTAAGCAGA--CCAGGGAA----ATAGGAAGCG-GGGGAACCATGTAGG-TGAGGGGCAGGAA-CAGAAA-----TGTATGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 471927 891 - 91754291 tctctctccctcttcccttcctcttc-tttccctctctgggtctctct---------ccaccctccccccatgctgt----ccattcatctc-----tttctcctttctctctccctctttt--tctctctcttctcttcctcttctctg---tctccgtttcccctgttctctctctttctct--------ccctggacctctctttttctGA---CAGCTCCCAGTTCCCCCATGTGCTCCCCACAGCCAGCCTCACCTGCTCTCTC-----CATCACTTACCTGGGACCACATGTGGAAGGACGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCGTGTCCCCTTCATGGCTGCCGCAAAAGTTCCTCTGGCTCCCTGGGGAAGCTCCAC-GC-CCAGGAGTTGCA-GTATGAGAAGCCGACGTGAGCCTGTCCCCTCCAGCGGCT--GGCCCGAACCAAGTGCGTTTCTCTGAAGGGGCCA----GAGAACCT--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACACCAAT----------CAGG---------CTTTTCTCTCCTCAG-CCCCACCC---------CACTCCCCCACCAGGAA----AGAA------AATACCGGTGCACCCATTGCTCTGCTCCTCACCAGCCTGAG-CTGAGTGGCAGGAGGGACGGGAGGAGATACGGGAGGAGACACGGGGGATGGGAACAGGTCACACAGGAAATGGGTGGGCCGCCTTCCTGGCTG-GGTTCC-TGGGCCCTCTCCTCCCTCCCCAGGGGCGGCCCCTGTCCCA-CCAGAACTTTGGGCTACT---------------------------------------GG---------GAAGAACGGG---------GAGGAAAGGGT--CGCAGAGAGAGCGACCTT-GGGGGTGTATGAACGGGGGGAAAGAGAGTGAGATTTAAGCAGACCCCAGGGAA----ATAGGAAGCG-GGGGAGCCATGTAGG-TGAGGGGCAGGAA-CAGAAA-----TGTATGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 983803 808 - 74750902 tctctctccctgctctcttcctcttc-tctccctctctgggtctctct---------cccccttctccccatcgtgtc---ccattcatctc--------------------------------tctctctcttctcttcctcttctctg---tctccctttccgctcttctctctctcCCGGC------------------CTCTGTCTCTGA---CAGCCCCCAGCTCCCCCACAGGGTCCCAGCAGCCAGCCT----------CCC-----CGTCACTTACCCAGGACCATGTGTGGAAGGAGGCAGAGACACAGGCAGCTCAGGGACACCCAGGGGACCCTCCTCCAGCAGGACCCCCTCTTGGTTCCAACAAAAGTCCCTCCGGCTCCCTGGGGAAGCCCCATGGC-CTAGGAGCTGTG-GTGTGAGGAGCAGAACTGAGTCTGTCTTCTCCGGCGGCT--GGCCAGAACCAGGTGCATTTCCCTGAAGGGGCCA----GAGGACCC--GGGAAGAGGACAAAAGAGGGCGGGGCCCCACGCCAAT----------CACC---------CTTTTCTTTCCTCAG-CCCCACCC---------CACTCCCCCACCAGGAA----AGAA------AACACCAATACACCCATTTCTCTGCTCCTCATCAG-TTGAG-CCAAGTGG-GGGAGGGACAGGAGGAAACGTG-----------GGGGAACGGGAACAGGGCACA------------------CCCTCCTAGTTG-GATTTT-TGGGCCCTCTCCTTCCT-CCCAGGGGCTGCCC--GTCCCA-CCAGACATTTGGGCTGCT---------------------------------------GG---------GGAGAATGGA---------GAAGAAAGGGC--CCTAGAGGGAGCAACCTTGGGGGGTGTATGAA-TGGGGGAA--AGAGTAAGATTTAAGGAGACTCCAGGGAA----CAGGGAAGC---CGGGACGATGCCGG-TGAGGGGCAGGAA-CGGAAA-----TGCA--C i calJac3.chr17 C 0 C 0 s mm10.chr16 65471106 885 - 98207768 TCTCTGTGCCTCTCTTCTTCTATTCC-TT---CTTTGTAACTGTCGTT---------CTAGTGTTTGCC------------CTATTAATCTCTTATCTTCCACCTTGTCCCATACCCACctc--tctctctc-tctctctctctt-tctt---cctccctcctcccctctctctcctttcctcc------------------cttcctctctGAAGCCAGCTCCCCTGCCCCAGACTTCTTTCCCACA-------------------TT-----CTTGTCTTACCAGGTA------GCAAGAGGAGGCAAGAATACAGGCAGCTCAGACACAGCCAGGGAAC---TCTCCAGTGAGGCCCTCTCATGGCTCCAG--AGAGTCCCTCAGGCTCCCTCAGGAATCCCCACAGCACTTGAGGTGGCA-GCAGGAGGAGCAGAGGCGAGCCTGTCCCCACTGGCTGCT--GGCCCCAAACAGGTGTATTTCCCTGAAGGGGTGAGAATGAGTACCAGGGGGAGGAGGACAAAAGAAGGCGTGGCCTCATGCCAATCATCCTTGCCCAGT---------CTTTTCTTTCCTCAATCCCCACCC---------CTTTCCCCCACCAGGAA----AAAATAAATTAATACCTGTACACCCATAGCTCTGCTCCTTGTCAACTTGAG-CCAAGTGGGAGGAGGGTAGGAGAGGGATGTG-----------GAGAAAGAGAAATGAGACTGGCGGGAAGAGAGAGGG-CACCTTCCTGCCTGTGGTCCC-TGAGATCTTTCCTCCCTCTCCTGGATCTGCAATGGCTACAGCTACAGTAGAAGGCAGCT---------------------------------------GGGTCACTTCAGAAGGAAGGGCAGAGATAATAGGGAAGAGCAGCACAGAGATAAAGAACTT-AAGGCTAGACTAA-CAGGAGAA--AAAGTGAGGTTTATAGGTACTATAATGAG---CATGGGGAGTGAGGGCAACTATATGTA-ATAAGGGGTGGAA-TAGAGATACCCTATACGC i mm10.chr16 I 7 C 0 s canFam3.chr33 29111490 905 + 31377067 --TCCCGCCCTCT-------CTCTGCAGTTGCCCCTGCGGCTCTTTCTCAGCATGAACCCTGTTTCCCCAAGACTGCCCGGCCCCTGAGCGC-----CGCCCTGCTCCTCGCTGTCCCT-----ACACCCCCTTTGCTGGCTCTTCACCGGcctcccgctctcccccatctcgtccctcgcccc----------------ccccctccccccgc---cagccc--------------agccccccGCAGGCAGCC--ACCCCCTGCCCCAGGCGCATCACTCACCCGGGACCACGGGCCAGAGGAGGCAGGAACACAAGCAGCTCAGGAACACCCAGGGGACCCTTCTGCCCCGGGCCCCCCTCATGG-TCCAGCAAGGTTCCCTCGGGCCCCCCGGGCAAGCTCCGCAGC-ACA----CAGCAGGTGTGAGGAGCAGAGGAGAA----------CTGGCGGCTCAGGCTGGGGACAGGTGTATTTCCCTG-AGGGGCCA----GAGTATCA-GGGGAGGAGGACAAAAGAAGGCGGGGCCCCCTGCCAAT----------CAGCCTTGCCCGTCTTTTCTTTCCTCAATCTCCAACCGCCGCCGTTTATTCCCCCACCAGGAAAAAGAGAA------AACCCTGATCCACCTATTGATCTGCTCCCGGGCAACCTGAG-CTGCTTAGGGGGACGGTC------AGACAC------------------------CAGGGCACACTGGCAGCCAGCGGGCCACCCTTCTGCCTG-GAACCCGTGGGCCCTCCTGTCCCTCCCCAAGGGCTG-CCCTGTCCTG-CCAGGGCTTCGGGCTGCTACCAAGGGAGGCAGTGGGGTGGTTTCAGAAGAAAGGGAAGG---------GGAGAACGGA---------GAACACGGGGG--CCGAGAGGGAGTGAGTTT-GGGGCTGTATGAT-TTGGAGA---AGGGTGAGCTTTGAGGAGACCCTAAGGAGTCTCACAGGGAGTG-AGGGGACAATGCAGGCTGAGAGGTAGGCGTTGGAGATGCCCTGGATGC i canFam3.chr33 C 0 I 300 e ponAbe2.chr3 199829116 6447 + 202140232 M a score=104651.000000 s hg38.chr3_KI270935v1_alt 182234 43 + 197351 CGTCTTTTGGAAAGGGGTGGTGTGCTTGGAATATCTGCTCAGT s panTro4.chr3 199820139 43 + 202329955 CGTCTTTTGGAAAGGGGTGGTGTACTTAGAATATCTGCTCAGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942769 43 + 123690457 CATCTTTTGGAAAGGGGTGGTATGCTTAGAATATCTGCTCAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92204 43 + 111706 CATCTTTTGGAAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123224 43 + 192460366 CATCTTTTGGAAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i macFas5.chr2 C 0 I 2 s papAnu2.chr2 120513 43 - 187378091 CATCTTTTGGAAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472818 43 - 91754291 CATCTTTTGGAAAGGGGTGTTGTGCTTAGAATATCTGCTCAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984611 34 - 74750902 CA--------AAGGGGGTGGTGTGCCTAGAA-GTCTGCCCAGT i calJac3.chr17 C 0 C 0 s mm10.chr16 65471991 42 - 98207768 CATCTTTTGGAA-TGGGTGATGAGGTTAGACCATCAGCTCAGT i mm10.chr16 C 0 C 0 e canFam3.chr33 29112395 300 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=3102.000000 s hg38.chr3_KI270935v1_alt 182277 2 + 197351 GC s panTro4.chr3 199820182 2 + 202329955 GC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942812 2 + 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92247 2 + 111706 GC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 120556 2 - 187378091 GC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472861 2 - 91754291 GC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984645 2 - 74750902 GT i calJac3.chr17 C 0 C 0 s mm10.chr16 65472033 2 - 98207768 AT i mm10.chr16 C 0 C 0 e canFam3.chr33 29112395 300 + 31377067 I e macFas5.chr2 123267 2 + 192460366 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=27752.000000 s hg38.chr3_KI270935v1_alt 182279 15 + 197351 AGGCGCGTGGCAGAC s panTro4.chr3 199820184 15 + 202329955 AGACGCGTGGCAGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942814 14 + 123690457 AGACGCATGGCAGA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92249 15 + 111706 AGATGCATGGCAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123269 15 + 192460366 AGATGCATGGCAGAC i macFas5.chr2 I 2 C 0 s papAnu2.chr2 120558 15 - 187378091 AGATGCATGGCAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472863 15 - 91754291 AGATGCATGGCAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984647 15 - 74750902 AGACAGATGGTCGAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65472035 13 - 98207768 --CAGCATGTGAAAC i mm10.chr16 C 0 C 0 e canFam3.chr33 29112395 300 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=8211.000000 s hg38.chr3_KI270935v1_alt 182294 4 + 197351 CCCA s panTro4.chr3 199820199 4 + 202329955 CCCA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 92264 4 + 111706 CCCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123284 4 + 192460366 CCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120573 4 - 187378091 CCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472878 4 - 91754291 CCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984662 4 - 74750902 CCCA i calJac3.chr17 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120942828 0 + 123690457 C a score=13086.000000 s hg38.chr3_KI270935v1_alt 182298 14 + 197351 GACGCGTGGCAGAC s panTro4.chr3 199820203 14 + 202329955 GACGCGTGGCAGAC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 92268 11 + 111706 GACGCATGGCT--- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123288 14 + 192460366 GACGCATGGCTGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120577 14 - 187378091 GACGCATGGCAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472882 14 - 91754291 GACACATGGCAGAC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120942828 0 + 123690457 C a score=51745.000000 s hg38.chr3_KI270935v1_alt 182312 96 + 197351 CC------CAGACGCGTGGCAGACCCCAGACGCGTGGCAGAACCTCAGTGCAGATGCGTGGCAGACCCCAGACGCACGGCAGATCC------------------------------------------------------------------CAGACACATGGCAGAC s panTro4.chr3 199820217 162 + 202329955 CC------CAGACGCATGGCAGACCCCAGACGCATGGCAGACCCTCAGTGCAGACGCGTGGCAGACCCCAGACACATGGCAGACCCTCAGTGCAGATGCGTGGCAGACCCCAGATGCGTGGCAGACCCCAGACGCATGACAGACCCTCAGTGCAGACGCGTGGCAGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942828 96 + 123690457 CC------CAGACACATGGCAGACCCTAGACGCATGGCAGACCCTCAGTGCAGACGCGTGGCAGACCCCAGACGTGTGGCAGACCC------------------------------------------------------------------CAGACGCATGACAGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92279 39 + 111706 ---------------------------------------GACCCTCAGGGCAGGCACGTGGCAGACC-----CTCAGGGCAGG------------------------------------------------------------------------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123302 100 + 192460366 CCTCAGGGCAGGCGCGTGGCAGACCCCAGATGCGTGGCAGACCCTCAGGGCAGGCGCGTGGCAGACCC--GACGCATGGCAGACCC------------------------------------------------------------------CAGATGCGTGGCAGAC i macFas5.chr2 C 0 T 32 s papAnu2.chr2 120591 97 - 187378091 CCTCAGGGCAGGCACGTGGCAGACCCCAGATGCATGGCTGACCCTCAGGGCAGGCGCGTGGCAGACCCCAGACGCGTGGCAGACCC------------------------------------------------------------------TCAGGGCAGGC----- i papAnu2.chr2 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=-87.000000 s hg38.chr3_KI270935v1_alt 182408 4 + 197351 -CCCA s panTro4.chr3 199820379 4 + 202329955 -CCCA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942924 4 + 123690457 -CCCA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 120688 2 - 187378091 GC--- i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 92318 0 + 111706 C e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e macFas5.chr2 123402 32 + 192460366 T e ponAbe2.chr3 199829116 6447 + 202140232 M a score=3003.000000 s hg38.chr3_KI270935v1_alt 182412 7 + 197351 GACCCAT s panTro4.chr3 199820383 7 + 202329955 GACGCAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120942928 7 + 123690457 GACGCAT i nomLeu3.chr11 C 0 M 176 s macFas5.chr2 123370 7 + 192460366 GACGCAT i macFas5.chr2 T 32 C 0 s papAnu2.chr2 120690 2 - 187378091 -----GT i papAnu2.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 92318 0 + 111706 C e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=7897.000000 s hg38.chr3_KI270935v1_alt 182419 19 + 197351 GGCAGACTC------CAGACGCGTG s panTro4.chr3 199820390 25 + 202329955 GGCAGACCCTCAGTGCAGACGCGTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 92318 6 + 111706 -------------------CGCGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123377 19 + 192460366 GGCAGACCC------CAGATGCGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120692 19 - 187378091 GGCAGACCC------CAGACGCGTG i papAnu2.chr2 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e ponAbe2.chr3 199829116 6447 + 202140232 M e nomLeu3.chr11 120942935 176 + 123690457 M a score=11730.000000 s hg38.chr3_KI270935v1_alt 182438 8 + 197351 GCAGACCC s panTro4.chr3 199820415 8 + 202329955 GCAGACCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120943111 8 + 123690457 GCAGACCC i nomLeu3.chr11 M 176 C 0 s rheMac3.chrUn_JH291127 92324 8 + 111706 GCAGACCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123396 8 + 192460366 GCAGACCC i macFas5.chr2 C 0 T 94 s papAnu2.chr2 120711 8 - 187378091 GCAGACCC i papAnu2.chr2 C 0 I 6 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=42927.000000 s hg38.chr3_KI270935v1_alt 182446 50 + 197351 CAGACGCGTGGCAGACTC-----CAGACGCATGGCAGAACCTCAGTGCAGACTCG s panTro4.chr3 199820423 50 + 202329955 CAGATGCGTGGCAGACCC-----CAGACGCATGGCAGACCCTCAGTGCAGACGCG i panTro4.chr3 C 0 I 558 s nomLeu3.chr11 120943119 55 + 123690457 CAGATGCGTGGCAGACCTCAGTGCAGGCGCATGGCAGACCCTCAGTGCAGGCGCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92332 45 + 111706 --GATGCATGGCAGACCC-----CAGACGCATGGCAGACCCTCAGGGCAGGC--- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123310 50 + 192460366 CAGGCGCGTGGCAGACCC-----CAGATGCGTGGCAGACCCTCAGGGCAGGCGCG i macFas5.chr2 T 94 C 0 s papAnu2.chr2 120725 34 - 187378091 CAGGCGTGTGGCAGACCC-----CAGACGCGTGGCAGAC---------------- i papAnu2.chr2 I 6 C 0 e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=3996.000000 s hg38.chr3_KI270935v1_alt 182496 8 + 197351 TGGCAGAA s panTro4.chr3 199821031 8 + 202329955 TGGCAGAC i panTro4.chr3 I 558 C 0 s nomLeu3.chr11 120943174 8 + 123690457 TGGCAGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123360 8 + 192460366 TGGCAGAC i macFas5.chr2 C 0 I 34 e rheMac3.chrUn_JH291127 92377 0 + 111706 C e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e chlSab2.chr15 472896 0 - 91754291 C e papAnu2.chr2 120759 0 - 187378091 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=1500.000000 s hg38.chr3_KI270935v1_alt 182504 1 + 197351 C s panTro4.chr3 199821039 1 + 202329955 C i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120943182 1 + 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 123402 1 + 192460366 C i macFas5.chr2 I 34 C 0 s papAnu2.chr2 120759 1 - 187378091 C i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472896 1 - 91754291 C i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 92377 0 + 111706 C e mm10.chr16 65472048 0 - 98207768 C e canFam3.chr33 29112395 300 + 31377067 I e calJac3.chr17 984666 0 - 74750902 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=34718.000000 s hg38.chr3_KI270935v1_alt 182505 25 + 197351 CTCAGTGCAGACGCATGGCAGACCC s panTro4.chr3 199821040 25 + 202329955 CTCAGTGCAGACTCGTGGCAGACCC i panTro4.chr3 C 0 I 896 s nomLeu3.chr11 120943183 25 + 123690457 CTCAGTGCAGGCACGTGGCAGACCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92377 13 + 111706 ------------GCGTGGCAGACCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123403 25 + 192460366 CTCAGGGCAGGCGCATGGCAGACCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120760 25 - 187378091 CTCAGGGCAGGCGCGTGGCAGACCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472897 25 - 91754291 CTCAGGGCAGGCGCGTGGCAGACCC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29112695 21 + 31377067 CTCAGAATATCTGCTTAGCAC---- i canFam3.chr33 I 300 C 0 e mm10.chr16 65472048 0 - 98207768 C e calJac3.chr17 984666 0 - 74750902 C e ponAbe2.chr3 199829116 6447 + 202140232 M a score=29501.000000 s hg38.chr3_KI270935v1_alt 182530 20 + 197351 CAGATGCGTGGCAGACCCTC s nomLeu3.chr11 120943208 20 + 123690457 CAGATGTGTGGCAGACCCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92390 20 + 111706 CAGATGCGTGGCAGACCCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123428 20 + 192460366 CAGATGCGTGGCAGACCCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120785 20 - 187378091 CAGATGCGTGGCAGACCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472922 20 - 91754291 CAGACGCATGGCAGACCCTC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29112716 20 + 31377067 CAGACACACCATAGTGTCTC i canFam3.chr33 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e calJac3.chr17 984666 0 - 74750902 C e ponAbe2.chr3 199829116 6447 + 202140232 M e panTro4.chr3 199821065 896 + 202329955 I a score=12390.000000 s hg38.chr3_KI270935v1_alt 182550 5 + 197351 ACCAG s nomLeu3.chr11 120943228 5 + 123690457 ACCAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92410 5 + 111706 ACCAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123448 5 + 192460366 ACCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120805 5 - 187378091 ACCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472942 5 - 91754291 ACCAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984666 5 - 74750902 ACCAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29112736 5 + 31377067 ACCAA i canFam3.chr33 C 0 C 0 e mm10.chr16 65472048 0 - 98207768 C e ponAbe2.chr3 199829116 6447 + 202140232 M e panTro4.chr3 199821065 896 + 202329955 I a score=1445885.000000 s hg38.chr3_KI270935v1_alt 182555 825 + 197351 ATGGTGGACTTCTTCTTTCCAGGgcagggagc-tggagccagggtgcagggagccagggacagTCTGGGAGACTGGCCTGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGCAGAACCTCGGTAGGAGGAA----GCGACTGTAACCT-GTGAGGAGGT---G-GAGCTGCTCCTGGAGACCTGGGGGCTCTGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGCGAGGAGGGAAAGGGACC----------------------CCAAGTAGGGT-TGTAAAG----ACGAAGAGGGCAG----TTGGTGTAGCTCTCTGCAAAGGAAAACGG-GGATACCTCCGCTCCCCTCTTTGCCACAGTGTGAATCTCTGCTTCTGATTCCTCAAGACTTGATTCCCGAATGTGGGGTG--TCTGTGGGGTGACTCGTCCCAGAGCAGGGACCTTCGATGCTCAGACACT-GTGGGGCCCAGGACAAGGACTCAGGGTTTCTGCATTCCCAAGCAGAGCCAGCCTTGTCCAGCAAGGAGTAGGCAACCGACGCTGTGGCGCTGTCTCCGAGG--GTCACGGAGGCCCTG---------TG-------ACCACTTGCTTCTAGAAGCTGAAAGTC------TGTTCATGG--CCCCAGGCCAAAGCCTGGGCCACGCCATAATAATGCGGATACCGTGGGGAAGTG------------GCGTGGT-CCCCCA---ACAGTCCCTCCAGCTCTGGGTGGACGAGCTGACCCTGTTCTTTCCTGGAGGTAAGAAAATCATAAAGGTAAAGAGTCATGTGGAGCATCCTGTGGGCGC--------------------------CTGGACGGGGCAGCAGGAGGGACCTACTGCAGGGAATTCGCAGACACCAAGGCCCAGCTTGGCCTTCGTGATCATTT s nomLeu3.chr11 120943233 802 + 123690457 ATGGTGGACTTCTTT-----------------------CCAGGGTGCAGGGAGCCCGGGACAGTCTGGGAGACTGGCCTGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGAGGGA----GTGACTGTAACCT-ATGAGGAGGT---G-GAGCTGCTCCTGGAGACCTGGGGGCTCTGCTCACCTCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGCGAGGAGGGACAGGGACC----------------------CCAAGCAGG-T-TGTGAAG----GTGAAGAGGGCAG----TTGGTGTAGCTCTCTGCAAAGGAAAACGG-GGATACCTCTGCTCCCCTCTTTGCCACAGTGTGAATCTCCGCTTCTGATTCCTCAAGACTTGATTCCCAAATGTGGGGTG--TCTGTGGGGTGACTGGTCCCAGAGCAGGGATCTTCAGTGCTCAGGCACC-GTGGGGCTCAGGACAAGGACTCCGGGTTTCTGCATTCCCAAGCAAAGCCAGCCTTGTCCAGCGAGGAGTAGGCAGCTGACGCTGTGGTGCCATCTCCGAGG--GTCATGGAGGCCCTG---------TG-------ACCACTTGCTTCTAGAATCTGAAAGTC------CGTTCATGG--CCCCAGGCCAAAGCCTGGGCCACGCCATAGTAATGCGGATACCGTGGGGAAGTG------------GCATGGT-CCCCCA---ACAGTCCCTCCAGCTCTGGATGGGCGAGCCGATCCTGTTCTTTTCTGGAGGTAAGAAAATCATGAAGGTAAAGAGGGATGTGGAGCATCCTGTGGGCGC--------------------------CTGGACAGGGCAGCAGGAGGGACATACTGAAGGGAATTTGCAGACACCAAGGCCCAGCTTGGCCTTCCTGATCAttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92415 840 + 111706 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCTACGGTGCAGGGAGCCTGGGACAGTGTGGGAGGCTGGCCCGAGTGAGCTGGCGTGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGAGGAGCAGTGCAGCTGTAACCC-ATGAGGAGGT---G-GAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAAGGACC----------------------CCAAACAGGGT-TGTAAAG----GTGAAGAGGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACCTCCGCTCCGCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAGGACTTGAATCCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-GTGGGGCCCAGGACGAGGAATCGGGGTTTCCGCATTCCCGAGCAGAGCCAGCCTCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGA--GTCATGGAAGCCCTG---------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTC------GGTTCATGG--CCCAAGGCCAAAGCCTG---CACGCCC--------AGGATACTGTGGGCAAGTG------------GTGTGGT-CCCCTA---ACAGTCCCTCCAGCTCTGGAT----GAGCTGATCCTGTTCTTTCCTGGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCATCCTGTGGGCGCCTGGGCAGGGCAGCAGGAGGGCACTACTGGGCAGGGCAGCAGGAGGGCACTACTGGAGGGAATTCGCAGACACCAAGGCCCAGCCTGGCCTTTGTGATCAttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 123453 840 + 192460366 ATAGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCTACGGTGCAGGGAGCCTGGGACAGTGTGGGAGGCTGGCCCGAGTGAGCTGGCGTGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGAGGAGCAGTGCAGCTGTAACCC-ATGAGGAGGT---G-GAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAAGGACC----------------------CCAAACAGGGT-TGTAAAG----GTGAAGAGGGCAG----TTGGTGTAGCTCTCCGCAAAGGCAAACGG-GGATACCTCCGCTCCGCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAGGACTTGAATCCTGAACGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-GTGGGGCCCAGGACGAGGAATCGGGGTTTCCGCATTCCCGAGCAGAGCCAGCCTCGTCCAGCGAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAAGCCCTG---------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTC------GGTTCATGG--CCCAAGGCCAAAGCCTG---CACGCCC--------AGGATACTGTGGGCAAGTG------------GTGTGGT-CCCCTA---ACAGTCCCTCCAGCTCTGGAT----GAGCTGATCCTGTTCTTTCCTGGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCATCCTGTGGGCGCCTGGGCAGGGCAGCAGGAGGGCACTACTGGGCAGGGCAGCAGGAGGGCACTACTGGAGGGAATTCGCAGACACCAAGGCCCAGCCTGGCCTTTGTGATCAttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120810 810 - 187378091 ATGGTGGA---CTTCTTTCCAGGGCAGGGAGC-CAGAGCTACGGTGCAGGGAGCCTGGGACAGCGTGGGAGGCTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGAGGAGCAATGCAGCTGTAACCC-ATGAGGAGGT---G-GAGCTGCTCCTGGAGACCCGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAGGGACC----------------------CCAAACAGGGT-TGTAAAG----GTGAAGAGGGCAG----TTGGTGTAGCTCTCTGCAAAGGCAAACGG-GGATACCTCCGCTCCCCTCTTTGCCACAGTGTGCATATCTGCTTCTGGTTCCTCAAGACTTGAATCCTGAATGTGGGGTG--TCTGTGGAGTGACTGGTCCCAGAGCAGGGACTTCCGACACTCAGACACC-GTGGGGCCCAGAACGAGGAATC-GGGTTTCTGCATTCCCGAGCAGAGCCAGCCTTGTCCAGCAAGGATTAGGCAGCGGACGCCGTGGTGCCGTCTCTGAGG--GTCATGGAGGCCCTG---------TG-------ATCACTTGCTTCTAGAAGCTGAAAGTC------GGTTCATGG--CCCAAGGCCAAAGCCTG---CACGCCC--------AGGATACTGTGGGCAAGTG------------GTGTGGT-CCCCTA---ACAGTCCCTCCAGCTCTGGAT----GAGCTGATCCTGTTCTTTCCTGGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCATCCTGTGGGCGC--------------------------CTGGGCAGGGCAGCAGGAGGGCACTACTGGAGGGAATTCGCAGACACCAAGGCCCAGCTTGGCCTTTGtgatcattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 472947 814 - 91754291 ATGGTGGACTTCTTCTTTCCAGGGCAGGGAGC-CAGAGCTATGGTGCAGGGAGCCTGGGACAGTGTGGGAGACTGGCCCGAGGGAGCTGGCATGGGCAGTGGG-TTGAAGGTGGAACCTGGGTAGGAGGAGCAATCCAGCTGTAACCT-ATGAGGAGGT---G-GAGCTGCTCCTGGAGACCTGGGGGCTCCGCTCACCCCAGTT-------------------CCACCTCTTGGAACTCACAGGCACAAGTGAAGAGGGACAGGGATC----------------------CCAAACAGGGT-TGTAAAG----GTGAAGAGGGCAG----TTGGTGTAGCTCTCTGCAAAGGCAAACGG-GGATACCTCCGCTCCCCTCTTTGCCACAGTGTGCATCTCTGCTTCTGGTTCCTCAAGACGTGAATCCTGAACGTGGGGTG--TCTATGGAGCGACTGGTCCCAGAGCAGGGACTCCCGACACTCAGACACC-GTGGGGCCCAGGATGAGGAATCGGGGTTTCTGCATTCCCGAGCAGAGCCAGCCTTGTCCAGCGAGGATTAGGCAGCGGACGCCGTGCTGCCGTCTCTGAGG--GTCATGGAGGCCCTG---------TG-------ATCACTTGCTTCTAGAAGCTAAAAGTC------GGTTCATGG--CCCAAGGCCAAAGCCTG---CACGCCC--------AGGATACCGTGGGCAAGTG------------GTGTGGT-CCCCTA---ACAGTCCCTCCAGCTCTGGAT----GAGCTGATCCTGTTCTTTCCTGGAGGTAAGAAAGTCATAAAGGTAAGGAGGGATGTGGAGCATCCTGTGGGCGC--------------------------CTGGGCAGGGCAGCAGGAGGGCACTACTGGAGGGAATTCGCAGACACCAAGGCCCAGCTTGGCCTTTGTGATCAttt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 984671 749 - 74750902 ATGGCAGA---GTTCTTTCCAAGACAGGGAGC-CAAAGCCGGGGTGCAGGGAGCCTGGGACCCTCTGGGAGAGTAGCCAGAGGGATCTGGCCTGGGCAGTGGG-C-------------------GGAGGGA----GCAGCTGTCACCT-ATGAGGAAGT---G-GAGTTGCTCCTGGAGACCCAGTGGCTCCGCTCACCCGGATT-------------------TGACCT-------GTCACAGG-ACAGGCAAGGAGGGGCAGGGACC----------------------CCAAGCAGGGT-CGTAAAG----GCAAAGAGGGCCG----TTGGTGTAGCTCTCTG-AAAGGGAAAC-A-GGACACCCCTGTACCCCTCTTTGC--CAGTGTG-ATTTCTGCTTCTGGTTCCTCAAGACTTGATTCCTGAATGTGGGGTG--TCTGTGGAGTGACTCGTCGCAGAGCAGGGACCTTAGGCTCCCAGACACC-ATGGAGCCCAGGATGAGCACTCGGGGTTTCTGCATTCCCAGGAGGAGCCAGCTTCGTCCAGCGA-GAGTCCACAGCGGACACTGTAGTGACATCTCCAAGG--GTCGTGGAGGTCCTG---------TG-------ACCACTT-------------------------------------CCCAAGGTCAAAGCCTG-----GGCCGTAACAATGCCAACACTGTGGAGAGG-A------------GCATGGT-CCCC-A---TCAGTCCCTCCAGCTCTTGATGGATGAGCTGACCCTGTTCTTTCCTGGGAGCAAGAAAGTTGTAAAGGTAAAGAGGGCTGTGGCGCATCCTGTGGGCAC--------------------------CTGAACAGGGCAGCAGGAGGGCACTGCCGAAGGGAGTCTGCAGAC-CCAGG--CCAGCGTGGCTCCTG-Gtttgttt i calJac3.chr17 C 0 C 0 s mm10.chr16 65472048 806 - 98207768 ATGGTGGATGTCTTCTGTCTGGGACAGGGAGT-------------------ATCTGAGGATACTAGGGGAAAA-AGCTTAAAAGATTTGCCAAGGCTAGTAGG-GTTCACATAGAAACTAGGTAGAATGT-----TTTTTCATCACCC-----GGATGT---GAGGGGTGCCCCTAGAGAACTGGAGGTTTGAATCATCCTGTTTTGGAACTCACCAGCTTAGACAACCTCTCAGAACT--CAGACTGAAGCAAGGAAGGCTATGGACTTTGCTTTGCCAAGCAAAGTATGCCAGGCAGAAT-TCTGAAG----TTGATGGTGGTGGGATTTTGGTAAAGCTGTGTG---AAGAAAGAGG-GGA-GCTTTCTCCTTACCCTTAGCCACTGCACGAATCTCTGCTTCTAACACCTCAAGGCACCATTCGCTAGGAGTGGGTA--TCTGTGGAGTGACTGGTCCCAAAGCAAAGAC---------------------AGAGAGCAAGATAAGCA-TCGGCATTTTGGCCTTCTCAGGCAGAGCCAGCCTTGCTAAGGCAACAT--AGTGGCAG-----GTTGTTTCATTTCATAGACCGCCACCGAAGACCTC---------GGTAGGTCTAACACCTGCTGACCATGTCAGTAAGAC------ATTCCACGGGACCCAAA--CTACGCTTT---GACTCTA---TCATGTAAATGCTATGTGTATGTACTACAGAGACACATGTGAC-ATTCCAGGCACCTTCCACCTGATTATGAAC----AAAGTTACCTCATTGTTTT-TAGGAGCGGGAAAACCAT-ATGGTAGAGAAGGA------------TGTAAGTAC--------------------------CTTGACAGGGCAACAGGAAGTTGTCACTGAAAACAGCTTGCATA------GGTACA-CTTGACCTTAGGGGTCATTC i mm10.chr16 C 0 C 0 s canFam3.chr33 29112741 837 + 31377067 ATGGTGGGTTTCTTCTTTCTAAAGGAGGGAACACAGAGCTGGGGTCCAGAGAGCCCAAGACAACCTGGGAAAGTGGCTTTAGGTATCTGGTATGGGTAGAGGGATTGAAGGTAGAGGCTGGGGAGAT--------GTCCTAGTGACCCTACAAGAAACTATGG-GATTCTCTTCTGGAAATCATAAGGCTCAGGTCACTCCATTT-------------------TTACGTTTTGGGACTTTCC--CACAGCCAAGAGGGAACAGGAACC----------------------CCAGACAGGGTGTGCCAGGTATAGTTATGAGGGCGGGAAGTGGGTGTAGC--TCCACAAAGGAAAACAGTGGAGATCTTCTC-CCACCCCTTGCCACAGCATGAATCTCTCCCTCTGGTTCCTCAAGACTTGGTTCCCT-GTGGGGGGTGGATCTATGGAGTGATTGATCCCAAAGCAGGGAGTTCAGGATCTCAAACACAGGCCCAGCCCAGGAC-AGGAATTAGCATTTCCACATTCCCAGGTGGAACGAGCCGTATCCAAAGAGGAGTAAACGGCCAATGCCATGATGC--TCTCAGAGG--ACCACGAAGGCCCCACCACCCTGTTG-------GCTTCTTACTTGCTGAAGCTTAAAATCCAATTACATCCAAGG--CATGAAGGCCAGACCTT---CCAGTTA---TAATGCGGATACTGCAGGAAAGTA------------GCACGGTGTCTCTA---TCAATCCTTTTACCTCCGCATGGATGAGCCGATCCCATTCTCTCCCGGGAGCAGGAAATTCATAAAGGCAAAGGGGGATTTCAGGCA----GAGAGTAT--------------------------CTAGACAGAACAGGAGGAGGATATCACTGAAGAGAATTTACAGATACCAAGGCCCAACTTGGTCTTCCTAATCATTT i canFam3.chr33 C 0 I 48 e ponAbe2.chr3 199829116 6447 + 202140232 M e panTro4.chr3 199821065 896 + 202329955 I a score=-487.000000 s hg38.chr3_KI270935v1_alt 183380 19 + 197351 TGCAC----------ttt----ttttttttttt s nomLeu3.chr11 120944035 24 + 123690457 tgtgct-----ttttttt----ttttttttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93255 20 + 111706 tgc---------tttttt----ttttttttttt i rheMac3.chrUn_JH291127 C 0 I 1 s macFas5.chr2 124293 21 + 192460366 tgc--------ttttttt----ttttttttttt i macFas5.chr2 C 0 I 1 s papAnu2.chr2 121620 24 - 187378091 tgcttt-----ttttttt----ttttttttttt i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 473761 15 - 91754291 tgc--------------t----ttttttttttt i chlSab2.chr15 C 0 I 1 s calJac3.chr17 985420 2 - 74750902 tg------------------------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65472854 33 - 98207768 TTTTATGACAGCTCTTTTCAGATTTAttatttt i mm10.chr16 C 0 C 0 e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M e panTro4.chr3 199821065 896 + 202329955 I a score=12618.000000 s hg38.chr3_KI270935v1_alt 183399 5 + 197351 gagat s panTro4.chr3 199821961 5 + 202329955 gagac i panTro4.chr3 I 896 C 0 s nomLeu3.chr11 120944059 5 + 123690457 gagac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93276 5 + 111706 gagac i rheMac3.chrUn_JH291127 I 1 C 0 s macFas5.chr2 124315 5 + 192460366 gagac i macFas5.chr2 I 1 C 0 s papAnu2.chr2 121645 5 - 187378091 gagac i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 473777 5 - 91754291 gaaac i chlSab2.chr15 I 1 C 0 s calJac3.chr17 985422 5 - 74750902 gagac i calJac3.chr17 C 0 C 0 s mm10.chr16 65472887 5 - 98207768 aaaat i mm10.chr16 C 0 I 251 e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=281141.000000 s hg38.chr3_KI270935v1_alt 183404 135 + 197351 ggagtcttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccgggttcacgccattcccctgcctcagcctccctagtagctggga-ctacaggcacctgccaccacg s panTro4.chr3 199821966 133 + 202329955 --agtcttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccgggttcacgccattcccctgcctcagcctccctagtagctggga-ctacaggcacctgccaccacg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120944064 135 + 123690457 ggagtcttgctctgtcgcccaggctggagtgcagtggcaccatctcagctcactgcaagctccgcctcccaggttcaagcaattctcctgcctcggcctcccgaatagctggga-ctacaggtgcccgccaccatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93281 136 + 111706 ggagtctcactctgtcacgcaggttggagtgcggtggcaccttctgtattcactgcaagctccgcctcccaggttcaagcaattcccccgcctcagcctcccgagcagctgggatttacaggtgcccaccaccacg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124320 136 + 192460366 ggagtctcactctgtcatgcaggttggagtacggtggcaccatctctattcactgcaagctccgcctcccaggttcaagcaattcccccgcctcagcctcccgagtagctgggatttacaggtgcccaccaccacg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 121650 136 - 187378091 ggagtctcactctgtcacccaggttggagtgcagtggcgcgatctctattcactgcaagctccacctcccaggttcaagcaattccaccgcctcagcctcccgagtagctgggatttacaggtgcccaccaccacg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 473782 136 - 91754291 agagtctcgctctgtcacccaggttggagtgcggtggcaccatctctattcactgcaagctccacctcccaggttcaagcaattcccccgcctcagcctcccgagtagctgggatttacaggtgcccaccaccaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985427 136 - 74750902 atagtcttgctctgtcgctgaggctggagtgcaatggcacaaccttggctcaccgcaacctctgcctctggagtccaagccattcccctgcctcagcttcccgagtagctgggatttacaggcacctgccactgcg i calJac3.chr17 C 0 C 0 e mm10.chr16 65472892 251 - 98207768 I e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=308295.000000 s hg38.chr3_KI270935v1_alt 183539 146 + 197351 cccggctaa-ttttttttgtatttttagtagggacgaggtttcaccatgttggccaggttggtctcgaacccctgaactcagatgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccactgcacccggc---cC s panTro4.chr3 199822099 146 + 202329955 cccggctaa-ttttttttgtatttttagtagggacgaggtttcaccacgttggccaggttggtctcgaacccctgacctcagatgatccgcccgccttggcctcccaaagtgctgggattacaggcgtgagccactgcacccggc---cC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120944199 143 + 123690457 cctggctaa--tttttttgtatttttagtagagacgggagttcaccatgttagccaggatggtctcgatctcctgacctc--atgatccacccacctcagcctcccaaagtgctgggattacaggcgtgagccacggcacccggc---cC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93417 150 + 111706 cccggctaatttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatccgcccgcctcggcctcccaaagtgctaggagtacaggcgtgagccaccacgcccggccTGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124456 150 + 192460366 cccggctaatttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatccgcccgcctcggcctcccaaagtgctaggagtacaggcgtgagccaccacgcccggccTGCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 121786 145 - 187378091 cccggctaa-ttttttttgtatttttagtagggacgagatttcaccatgttggccaggctggtctcgaactcctgacctcagatgatctgcccgcctcggccttccaaagtgctgggagtacagtcgtgagccaccgcgc----cctgcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 473918 146 - 91754291 cctggctaatttttttttgtatttttagtagggacgaggtttcaccatgttggccaggctggtctcgaactcctgacctcagatgatccgcccgcctcggccttccaaagtgctgggagtacaggcgtgagccaccgcgc----cctgcc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985563 125 - 74750902 cctggctaa-ttttttttgtatt-----------------ttcaccatgttgaccagactggtctcgaactcctgacctc--gcaatctgcccacctc--cctcccaaagtgctgggattacaggtgtaagccaccacacccagc---TC i calJac3.chr17 C 0 C 0 s mm10.chr16 65473143 131 - 98207768 tctgtttat-ttccttttgagtt----gatgaaacggtgggtagctgtctagcccaggctggcctggaaatcttg----------attctcctgcctcagcct-ctacagtgttgggatttcaggaatgtgctaccatgactggc---tc i mm10.chr16 I 251 I 246 e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=101743.000000 s hg38.chr3_KI270935v1_alt 183685 45 + 197351 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCCCCCCATTAC s panTro4.chr3 199822245 45 + 202329955 GTGGTCATTTTTC--TGTCAGCTCTTGCTCGTGGGTCCCCCCATTAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120944342 47 + 123690457 GTGGTCATTTTTCTATGTCAGCTCTCGCTCGTGGGTCCCCCCATTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93567 47 + 111706 GTGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTCCCCCATTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124606 47 + 192460366 GTGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTCCCCCATTAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 121931 47 - 187378091 gtGGTCATTTTTCTATGTCAGCTCTTGCTTGTGGGTTCCCCCATTAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474064 47 - 91754291 GTGGTCATTTTTCTATGTCAGCTCTTGTTTGTGGGTTCCCCTATTAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985688 43 - 74750902 GTGATCATTTTTC--TGTCAGCTCTCGCTCATGG--TCCCCCATTAC i calJac3.chr17 C 0 C 0 e mm10.chr16 65473274 246 - 98207768 I e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=15225.000000 s hg38.chr3_KI270935v1_alt 183730 10 + 197351 CTTTCCACAG s panTro4.chr3 199822290 10 + 202329955 CTTTCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120944389 10 + 123690457 CTTTCCACAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93614 9 + 111706 CTTTCCA-AG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124653 9 + 192460366 CTTTCCA-AG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 121978 9 - 187378091 CTTTCCA-AG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474111 9 - 91754291 CTTTCCA-AG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985731 10 - 74750902 CTTTCCATAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65473520 10 - 98207768 TTGTTCATTT i mm10.chr16 I 246 C 0 e canFam3.chr33 29113578 48 + 31377067 I e ponAbe2.chr3 199829116 6447 + 202140232 M a score=333488.000000 s hg38.chr3_KI270935v1_alt 183740 164 + 197351 GTTTTGT-TTGGTGAC----GCTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCAAACTAAGCGCTGGACATCTTGTTGACCGAA---CACAG-GTAGCTGACCTCTTTCCCATGCCAGGAAGGCCAGAGGCACACAGCGCTCTCCGGAA s panTro4.chr3 199822300 105 + 202329955 GTTTTGT-TTGGTGACAACAGTTTTCAGGACAACAGTTTTCCATCTCTAGAGGAGAAA-GGAGCA-TCCAGGTGAGACCA-------------------------------------------------------------------GGCCAGAGGCACACAGCGCTCTCTGGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120944399 163 + 123690457 GTTTTGT-TTGGTGAC----GCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAACTAAGAGCTGGACATCTTGTTGACCGAA---CACAG-GTAGCTGACA-CTTTCCAATGCCAGGAAGGCCAGAGGCGCAGAGTGCTCTCCGGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93623 159 + 111706 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAAACCAAACTAAGAGTTGGGCATCTTGCTGACCGAA---CACAG-GTAGCTGACCACTTTCCAATGCCAGGAAGGCCAGAGGCC-----TTCTCTCTGGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124662 159 + 192460366 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGACCAAACTAAGAGTTGGGCATCTTGCTGACCGAA---CACAG-GTAGCTAACCACTTTCCAATGCCAGGAAGGCCAGAGGCC-----TTCTCTCTGGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 121987 159 - 187378091 GTTGTGT-TTGGTGAT----GCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGACCAAACTAAGAGTTGGGCATCTTGCTGACCGAA---CACAG-GTAGCTGACCACTTTCCAATGCCAGGAAGGCCAGAGGCC-----TTCTCTCTGGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474120 159 - 91754291 GTTGTGT-TTGGTGAC----CCTTTCAGGACCACAGTTTTCCATCTCTAGAGGAGAAA-GAAGCA-TCCAGGTGAGATCAAACTAAGAGTTGGGCATCTTGCTGACCGAA---CACAG-GTAGCTGACCACTTTCCAATGCCAGGAAGGCCAGAGGCC-----TTCTCTCTGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985741 163 - 74750902 GTTTTGT-TTGGTGAC----GCTTTCA-AACGACACTTTTCCATCTATAGGGGAGAAA-GGAGCATTCCAGGTGAGACCAAACTGGGAGCTGGGCATTGTATTGACCAAA---CACAG-GCAGCTGAGCACTTTCCAGTGCCAGGAAGGCCAGAGGCGCAGAGCGACCTCCGGA- i calJac3.chr17 C 0 C 0 s mm10.chr16 65473530 122 - 98207768 GTGTTGTCTTAATGAC----ACTCTCTAGAGCACACCTTCTCATCCACAAAAGCCAAA---ACCC-TTCAGGTTACACTGAAGTAACAGCTGG------TGTTAACCTCA---TACAGAGTTTCAGAGCATTC----------------CCAGAG-------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29113626 168 + 31377067 GTTTTGT-TTGGTGAC----ACTCTCTGGACTGCAG-TGTCCATCTACAGAGTAGAAAAAAAGCATTACAGGTCAGACCAAAGTAAGAGTTGGACATATTGTTGACCTGACCCCGCAG-ATAACCTCCCACTATCCAATGCAAGGAAGACCAGAGGCACAAAATGTTCTTCGGAG i canFam3.chr33 I 48 C 0 e ponAbe2.chr3 199829116 6447 + 202140232 M a score=82265.000000 s hg38.chr3_KI270935v1_alt 183904 34 + 197351 GCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTT s panTro4.chr3 199822405 34 + 202329955 GCTGCTGTGACGGCCGAGACTCCAGGAGGGCGTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835654 34 + 202140232 GCTGCTGTGACGGTCAGAACTGCAGGAgggcgtt i ponAbe2.chr3 M 6447 I 1 s nomLeu3.chr11 120944562 34 + 123690457 GCTGCTGTGATGGCCCAGACTCCAGGAAGGCGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93782 34 + 111706 GCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124821 34 + 192460366 GCTGCTGTGATGGCCAGGACTCCAGGAGGGTGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 122146 34 - 187378091 GCTGTTGTGATGGCCAGGACTCCAGGAGGGTGTT i papAnu2.chr2 C 0 I 324 s chlSab2.chr15 474279 34 - 91754291 GCTGCTGTGATGGCTAGAACTCCAGGAAGGTGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985904 17 - 74750902 -----------------GACTCCAAGAGGGCGTT i calJac3.chr17 C 0 C 0 s mm10.chr16 65473652 12 - 98207768 --------GCTGACcaggac-------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 29113794 33 + 31377067 GCCACTGCAGAGGCTGAGATTCC-GCTGggcatt i canFam3.chr33 C 0 C 0 a score=310482.000000 s hg38.chr3_KI270935v1_alt 183938 99 + 197351 Ac---aaacct--gggcttg-atcc-cagctctgccaccgcgtc--ac----cacaaagtcacagcctcttcgagct--gttttcctcgttcacctgtaaaatggggata---acac s panTro4.chr3 199822439 99 + 202329955 Ac---aaaccc--gggcttg-atcc-cagctctgccaccgcgtc--gc----cacaaagtcacagcctcttcgagct--gctttcctcgttcacctgtaaaatggggata---acac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835689 101 + 202140232 ac---aaacccaagggcttg-attc-cagctctgccaccgcatc--gc----cacaaagtcacagcctcttcgagct--gttttcctcgttcatctgtaaaatggggata---acac i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 120944596 103 + 123690457 Ac---aaaccc--gggctta-atcc-cagctctgccactgtgtc--gcccgacacaaagtcacggcctcttcgagct--gttttccttgttcatctgtaaaatggggata---acac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93816 102 + 111706 Ac---aaaccc--gggctcg-atcc-cagctctgccactgagtc--gt----cacaaattcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggataatgacac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124855 102 + 192460366 Ac---aaaccc--gggctcg-atcc-cagctctgccactgagtc--gt----cacaaagtcacagccccttcgagct--gttttcctcgttcatctgtaaaatggggataatgacac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 122504 102 - 187378091 ac---aaaccc--aggctcg-atcc-cagctctgccaccaagTC--GT----CACAAAGTCACAGCCCCTTCGAGCT--GTTTTCCtcgttcatctgtaaaatggggataatgacac i papAnu2.chr2 I 324 C 0 s chlSab2.chr15 474313 102 - 91754291 Ac---aaaccc--gggctcg-atcc-cagctctgccaccgagtt--gt----cacaaagtcacagccccttcgagct--gtcttcctcgttcatctgtaaaatggggataatgacac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 985921 107 - 74750902 ACa--aaacct--gggctcg-atcc-cagctctgccactgagtcaagt----cacaaagtcacagcctcttcgagctgagttttccttgttcatctgtgaaatggggataatagtgc i calJac3.chr17 C 0 C 0 s mm10.chr16 65473664 92 - 98207768 -------acct--ggacttt-agctgtagctttgttacccaag---gt--------aagtcccagtatctttaagcc--ttgtttttc--tcatctgaaaaatgggagtaataccac i mm10.chr16 C 0 C 0 s canFam3.chr33 29113827 94 + 31377067 --aggacacct--gggcttgaatcc-cagttctgctccc-------ca----aactaagtcacagcctttttgaacc--ttattttcc--tcatctatgaaacagggata---atac i canFam3.chr33 C 0 I 473 a score=202516.000000 s hg38.chr3_KI270935v1_alt 184037 59 + 197351 ctatctgaaaggttgtagggtgggagtgagcctgtagatgctgaggggctGCGGGAGTA s panTro4.chr3 199822538 59 + 202329955 ctatctgaaaggttgtagggtgggagtgagcctgtagatgctgaggggctGCGGGAGTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835790 59 + 202140232 ctatctgaaaggttgtAGAGTGGGAGTGAGCCTGTAGATGCTGAGGGGCTGCGGGAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120944699 59 + 123690457 ctatctgaaaggttgtAGGGTGGGGGTGAGCCTGTAGATGCTGAGGGGCTGCGGGAGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93918 59 + 111706 ctatctgaaaggttgtAGGGTGGGAGTGAGCCTGTAGATGCTGAGGGGCTGTGGGAGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 124957 59 + 192460366 ctatctgaaaggttgtAGGGTGGGAGTGAGCCTGTAGATGCTGAGGGGCTGTGGGAGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 122606 59 - 187378091 CTATCTGAAAGGTTGTAGGGTGGGAGTGAGCCTGTAGATGCTGAGGGGCTGTGGGAGTG i papAnu2.chr2 C 0 I 306 s chlSab2.chr15 474415 59 - 91754291 ctatctgaaaggttgtagggtgggagtgagcctgtagatgctgaggggctgtggaaGTG i chlSab2.chr15 C 0 I 200 s calJac3.chr17 986028 59 - 74750902 ctacctgaaaggttgtagggagggaatgagtctacaggtgctgaggtgctttgGGAGTG i calJac3.chr17 C 0 C 0 s mm10.chr16 65473756 59 - 98207768 ttaccagaaaagctataagactgaaatgagcttatagatgagagggtgccttacaaaTG i mm10.chr16 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I a score=2997.000000 s hg38.chr3_KI270935v1_alt 184096 1 + 197351 T s panTro4.chr3 199822597 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835849 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120944758 1 + 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93977 1 + 111706 T i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125016 1 + 192460366 T i macFas5.chr2 C 0 I 154 s papAnu2.chr2 122971 1 - 187378091 T i papAnu2.chr2 I 306 C 0 s chlSab2.chr15 474674 1 - 91754291 T i chlSab2.chr15 I 200 C 0 s calJac3.chr17 986087 1 - 74750902 C i calJac3.chr17 C 0 C 0 s mm10.chr16 65473815 1 - 98207768 T i mm10.chr16 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I a score=61696.000000 s hg38.chr3_KI270935v1_alt 184097 31 + 197351 TAGGACACCTGTTGTGAGGACACCTGTTGTT s panTro4.chr3 199822598 30 + 202329955 TAGGACACCTGTTGTGAGGACACTTGTTGT- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835850 30 + 202140232 TAGGACACCTGTTGTGAGGACACCTGTTGT- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120944759 30 + 123690457 GAGG-CACCTGTTGTGAGGACACCTGTTGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93978 31 + 111706 TAGGATGCCTGTTGTTAGGACGCCTGTTATT i rheMac3.chrUn_JH291127 C 0 I 171 s macFas5.chr2 125171 31 + 192460366 TAGGACGCCTGTTGTTAGGACACCTGTTGTT i macFas5.chr2 I 154 I 78 s papAnu2.chr2 122972 31 - 187378091 TAGGACGCCTGTTGTTAGGACGCCTGTTGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474675 31 - 91754291 TAGGACACCTGTTGTTAGGACGCCTGTTGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986088 12 - 74750902 TAGGACACCTGT------------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 65473816 24 - 98207768 TAGGATACCAGCAG--AGGGCATCTG----- i mm10.chr16 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I a score=40848.000000 s hg38.chr3_KI270935v1_alt 184128 31 + 197351 ACGACACCTGTTGTGAGGACACCTGTTGTGG s panTro4.chr3 199822628 16 + 202329955 --------------GAGGACACCTGTTGTG- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835880 16 + 202140232 --------------GAGGACACCTGTTGTG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120944789 30 + 123690457 AGGACAGCTGCTGTGAGGACACCTGTTGTG- i nomLeu3.chr11 C 0 I 450 s rheMac3.chrUn_JH291127 94180 29 + 111706 -GGATGCCTGTTGTTAGGACACCTGTTGTT- i rheMac3.chrUn_JH291127 I 171 C 0 s macFas5.chr2 125280 30 + 192460366 AGGACGCCTGTTGTTAGGACGCCTGTTGTT- i macFas5.chr2 I 78 C 0 s papAnu2.chr2 123003 30 - 187378091 AGGACGCCTGTTGTTAGGACACCTGTTGTT- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474706 30 - 91754291 AGGACGCCTGTTGTTAGGACGCCTGTTGTT- i chlSab2.chr15 C 0 C 0 e mm10.chr16 65473840 0 - 98207768 C e canFam3.chr33 29113921 473 + 31377067 I e calJac3.chr17 986100 0 - 74750902 C a score=107410.000000 s hg38.chr3_KI270935v1_alt 184159 41 + 197351 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCCGGG s panTro4.chr3 199822644 41 + 202329955 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCCGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835896 41 + 202140232 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCCGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120945269 41 + 123690457 AGGACACCTGTGAAGAAATGTGGCTCCTCCTTCCA-------------TCCAGC i nomLeu3.chr11 I 450 C 0 s rheMac3.chrUn_JH291127 94209 41 + 111706 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCCAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125310 41 + 192460366 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCCAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123033 41 - 187378091 AGGACACCTGTGGAGGAACATGGCTCCTCCTTCCA-------------TCCAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474736 41 - 91754291 AGGACACCTGTGGAGGAACGTGGCTCCTCCTTCCA-------------TCTAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986100 43 - 74750902 -----------GGAGGAATGTGGTTCCTCCTTCCGCCCCCGTCCCGCCCCCCGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65473840 19 - 98207768 -----GCTTGTGG-----------------CTTCA-------------TCCTGG i mm10.chr16 C 0 C 0 e canFam3.chr33 29113921 473 + 31377067 I a score=339903.000000 s hg38.chr3_KI270935v1_alt 184200 103 + 197351 CATCATCCCT-----------------------------------GGAGGGAGACACAAACGAGGGCCAGCCAGGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCGTCCCCTTTGAGTCT s panTro4.chr3 199822685 102 + 202329955 CATCATCCCT-----------------------------------GGAGGGAGACACAAACGAGG-CCAGCCAGGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCGTCCCCTTTGAGTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199835937 137 + 202140232 CATCATCCCTGGAGGGAGACACACAAGGCCAGGAGCCAGGATGCAGGAGGGAGACACACACGGGG-CAAGCCAGGATAC-AGGAGGAGTCCGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCGTGCATCCCCTTTGACTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120945310 102 + 123690457 CATCATTCCT-----------------------------------GGAGGGACACAAAAACGAGG-CAAGCCAGGATGC-AGGAGGAGTCTGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGTGTCCCCTTTGACTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94250 102 + 111706 CATCATCCCT-----------------------------------GGAGGGAGACACAAATGAGG-AAAGCCAGCATAC-AGGAGGAGTCTGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCATCCCCTTTGAGTTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125351 102 + 192460366 CATCATCCCT-----------------------------------GGAGGGAGACACAAATGAGG-AAAGCCAGCATAC-AGGAGGAGTCTGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCATCCCCTTTGAGTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123074 102 - 187378091 CGTCATCCCT-----------------------------------GGAGGGAGACACAAATGAGG-AAAGCCAGGATAC-AGGAGGAGTCTGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCATCCCCTTTGAGTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474777 102 - 91754291 CATCATCCCT-----------------------------------GGAGAGAGACACAAATGAGG-AAAGCCAGGATAC-AGGAAGAGTCTGGAAGTGAATTTCCAGGCCC------------AAGTCTTTCCTGCATCCCCTTTGAGTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986143 102 - 74750902 CATCGTCCCT-----------------------------------GAAGGGAGACACCAACGAAG-CAAGCCAGGGAAG-AGGAGGCGTCGGGAAGTGAATTTCCAGGCCC------------AGGTCTTTCCTGCATCCCCTCTGAGTTT i calJac3.chr17 C 0 C 0 s mm10.chr16 65473859 107 - 98207768 CATCATCACT-----------------------------------GAAGAGAGA----AATGAAG-TCAGCAAGCAGA--AGAAAGAGTCT-GAAGCAGAGACCCAAGCTTGTCTGCCCATAAAGGTCTCTCCTG-ACTCCATTTAGGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 29114394 115 + 31377067 CATCATCCCT-----------------------------------AAAGTTAGAAACACATGACA-GCAGCCAAGGGACAAGGAGCAGTCTGGAAAAGAATTTCCAGGCCCTTCTGTGTGCTGGGGTCTTTGCTGCATCCCCATAGGGTTT i canFam3.chr33 I 473 I 290 a score=90945.000000 s hg38.chr3_KI270935v1_alt 184303 33 + 197351 TATAGGATCCTGATTAGGAGCGTG---AGATCCTG------G s panTro4.chr3 199822787 33 + 202329955 TACAGGATCCTGATTAGGAGCGTG---AGATCCTG------G i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199836074 33 + 202140232 TACAGGATCCTGATTAGAAGCACG---AGATCCTG------G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120945412 33 + 123690457 TACAGGATCCTGATCAGGAGCGTG---AGCTCCTG------G i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94352 33 + 111706 TACAGGATTCTGATTAGGAACGTG---AGATCCTG------G i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125453 33 + 192460366 TACAGGATTCTGATTAGGAACGTG---AGATCCTG------G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123176 33 - 187378091 TATAGGATTCTGATTAGGAACGTG---AGATCCTG------G i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474879 33 - 91754291 TACAGGATTCTGATTAGGAACGTG---AGATCCTG------G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986245 35 - 74750902 T-CAGGATCCCGATTAGGAGCATGTCATGGTCCTG------G i calJac3.chr17 C 0 C 0 s mm10.chr16 65473966 39 - 98207768 TTCAGTACTGGGACTAGGAACCAG---AAACCTTGTGAGAAG i mm10.chr16 C 0 C 0 e canFam3.chr33 29114509 290 + 31377067 I a score=756802.000000 s hg38.chr3_KI270935v1_alt 184336 224 + 197351 AGAACTGGGCGTGCGCACTCCT-GTTCACCTCTTCCCTGCCCACGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAATATGCCCATTTTCCAGAGTTAGGAT-GTGTCTGGGTCTCTGTGATAAATGGCTCTGTCTTCATCTGGGTTGGGTCACGGGACACCCATTT--GTCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAATGGGGTGAATGAGAGG s panTro4.chr3 199822820 224 + 202329955 AGAACTGGGCGTGCGCACTCCT-GTTCACCTCTTCCCTGCCCCCGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAATATGCCCATTTTCCAGAGTTAGGAT-GCATCTGGGTCTCTGTGATAAATGGCTCTGTCTTCATCTGGGTTGGGTCACGGGACACCCATTT--GTCCTTCCTTCTCTCCTCCCAAGGCATCCGATGGGGACAGAATGGGGTGAATGAGAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199836107 222 + 202140232 AGAACTGGGCGTGCGCGCTCCT-GTTCACCTCTTCCCTGCCCACGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACATGCCTATCTTC--GAGTTAGGAT-GCGTCTGGGTCTCTGTGATAAATGGCTCTGTCTTCATCTGGGTTGGGTCACGGGACACCCATTT--GTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGATAGAATGGGGTGAATGAGAGG i ponAbe2.chr3 C 0 I 442 s nomLeu3.chr11 120945445 224 + 123690457 AGAACTGGGCGTGCGCGCTCCT-GTTCGCCTCTTCCCTGCCTATGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACATGCCCATTTTCCAGAGTTAGGAT-GCGTCTGGGTCTCTGTGATAAATGGCTCTGTCTTCATCTGGGTTGGGTCACGGGACACCCATTT--GTCCTTCCTTCTCCCCTCCCAAGGCCTCTGATGGGGACAGAATGGGGTGAATGAGAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94385 224 + 111706 AGAACTGGGCATGCGCACTCCT-GTTTACCTCTTCCCTACCCACGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACGTGCCCATTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGATAAATGACTGTCTCTTCATCTGGGTTGGATCATGGGACACCCATTT--GTCCTTCCTTCCCCCCTCCCAAGGCATCTGATGGGGACAGAATGGGGTGAATGAGAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125486 224 + 192460366 AGAACTGGGCATGCGCACTCCT-GTTCACCTCTTCCCTACCCACGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACGTGCCCATTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGATAAATGACTGTCTCTTCATCTGGGTTGGATCATGGGACACCCATTT--GTCCTTCCTTCCCCCCTCCCAAGGCATCTGATGGGGACAGAATGGGGTGAATGAGAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123209 224 - 187378091 AGAGCTGGGCATGCGCACTCCT-GTTCACCTCTTCCCTACCCACGCCTGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACGTGCCCATTTTCCAGAGTTAGGAT-GCGTCTAGGTCTCTGTGATAAATGACTGTCTCTTCATCTGGGTTGGATCATGGGACACCCATtt--gtccttccttctcccctcccaagGCATCTGATGGGGACAGAATGGGGTGAATGAGAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 474912 217 - 91754291 AGAACTGGGCATGCGCACTCCT-GTTCACCTCTTCCCTACCCATGCCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCAACGTGCCCATTTTCCA-------GAT-ACGTCTAGGTCTCTGTGATAAATGACTGTCTCTTCATCTGGGTTGGATCATGGGACACCCATTT--GTCCTTCCTTCTCCCCTCCCAAGGCATCTGATGGGGACAGAATGGGGTGAATGGAAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986280 222 - 74750902 AGATCTGGGCGTGTGCACTCCT-GTTCACCTCTTCCCTGCCCACACCCGTTTCCCTTCT-------GCTTT----CCAGCTCCC-CTCACCTTGCCCATTTTCCAGAGTGAGGAT-GCGTCTCGGTCTCTTTGATAAATGATTCCTCCTTCCTCTGGGTTGGCTCACAGGACACCCATTT--GTCCTTCCTTCTCCCTTCCCAAGGCATCTGATGGGGACAGAGTGGGGTGAATGGGG-- i calJac3.chr17 C 0 C 0 s mm10.chr16 65474005 192 - 98207768 AGCTCTGTG-ATATTCCCCCAT-CTTCTCCCTGTCTCT-CTCAGGTCTCTTTGACTTTC-------CCTTTGAGGCCAGCTCCA---TGGCTTGTTCATTTTCCAGTGTT--------------GTGTCTGTAGT-AATGCCTCTCTCTCTGCCCAGG-TGAATCTTGAGG-----ATTTTGTTCTTTCCTTCTGCCCTCCCAATGCATCCTACAGG--TCGGTTAGG------------ i mm10.chr16 C 0 C 0 s canFam3.chr33 29114799 217 + 31377067 AGACATCGGTGTGTGCACACCTCATTCATCTTTTCTCTGCCTGCCTCCACTTCCCCTCTCGGTTGCCCTTTCTGCCTGGCTCCTTCTCAACTGGCTCCTTTTCCAGAGCTGGGATGGCTCCTGTGTCTCTGCAACAAATGCCTCTGTCTTTGTCTG---------------------TTT--GTCCTTCCTTCTCCCCTCCCAAGGCATCCGATGGGGACACAGAGGGGAGAGTAAGAGA i canFam3.chr33 I 290 C 0 a score=302740.000000 s hg38.chr3_KI270935v1_alt 184560 92 + 197351 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCGAAAAACCTCCTAGGCCCGCATACTGCTGGGTCTGCATAGGG---GCAGGAGTCTGAAG s panTro4.chr3 199823044 92 + 202329955 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCGAAAAACCTCCTAGGCCCGCATACTGCTGGGTTTGCATAGGG---GCAGGAGTCTGAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199836771 92 + 202140232 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGGGGCCGAAAAACCTCCTAGGCCCGCATACTGCTGGGTTTGCATAGGG---GCAGGAGTCTGGAG i ponAbe2.chr3 I 442 C 0 s nomLeu3.chr11 120945669 91 + 123690457 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCGAAAAACCTCCTAGG-CCACGTACTGCTGGGTGTGCATAGGG---GCAGGAGTGTGAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94609 92 + 111706 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCGAAAAATCTCCTAGGCCTGCATGCTGCTGGGTTTGCACAGGG---GCAGGAGTCTGAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125710 92 + 192460366 GGACAAAATGAGTGGCTTCTCT----AGTTCCTTGTGGCCGAAAAATCTCCTAGGCCTGCATGCTGCTGGGTTTGCACAGGG---GCAGGAGTCTGAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123433 92 - 187378091 GGACAAAATGAGtggcttctct----agttccttgtgGTCGAAAAACCTCCTAGGCCTGCATGCTGCTGGGTGTGCACAGGG---GCAGGAGTCTGAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 475129 91 - 91754291 GGACAAAATGAGTGGCTTCTCT----AGTTTCTTGTGGCCGAAAAGTCTCCTAGGCCTGCATGCTGCTGGGTGTGCACA-GG---GCAGGAGTCTGAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986502 91 - 74750902 GGACAAAATGAATGGCTTCTCT----AGTTCCATGTGGCTGAAAAACCTCCCAGGCCCACATACTGCTGGCTTTGC-CGGGG---GCATAAATCTGAAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65474197 94 - 98207768 GGAAGAAACCACTGGCTTCTCCTAGATGTGCCCTGT-----CAAGACCTCCCATGGCTCTAGGCTGCTGAGTTTGCTTCAGGCATGAAGAACTCTGTAG i mm10.chr16 C 0 I 1552 s canFam3.chr33 29115016 90 + 31377067 GGAGGCCATGAGTGGATTCTCTC---CGTCCTGTTTGGT--GGAGACCTCCTAGGCCTGCAGACCATGGTGCTTACTCA-CA---GCAGGAACCTGAAA i canFam3.chr33 C 0 C 0 a score=957978.000000 s hg38.chr3_KI270935v1_alt 184652 303 + 197351 TCAGGTGTAAGTTAATATTCCACGGGAG-GCAGGAAGAGCTTAGTGTGGATGTGGGGTGTAAGTAAATTGGAGCAAGGAT--AAGATCATGAGATTCTCCCAGACTTGGCTTGAAGAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTCCAAGAGAGATTCCCCTTCTAAGCTACCCA-AGTAGGAGTCCCTA----GTTTTTT--------GGGTCCCCTAAAATTGCTTACCTTTATATCATTTATGCC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGATCTCGAGCAGGAAG s panTro4.chr3 199823136 303 + 202329955 TCAGGTGTAAGTTAATATTCCACGGCAG-GCAGGAAGAGCTTAGTGTGGATGTGGGGTGTAAGTAAATTGGAGCAAGGAT--AAGATCATGAGATTCTCCCAGACTTGGCTTGAAGAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTTCAAGAGAGATTCCCCTTCTAAGCTACCCA-AGTAGGAGTCCCTA----GTTTTTT--------GGGTCCCCTAAAATTGCTTACCTTTATACCATTTATGCC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199836863 300 + 202140232 TCAGTTGTAAGTTAATATTCCGTGGGAG-GCAGGAAGAGCTTAGTGTGGGTGTGGGGTGTAAGTAAACTGGAGCAACGGTAAAAGATCATGAGATTCTCCCAGACTTGGCTTGAATAGAC---AGCTGGATTTGAGGCAGCAAAGCCAGGATCTCCAAGACAGATTCCCCTTCTAAGCTACCCA-AGTAGGAGTCCCTC----GTTTTTT--------GGGTCCCCTAAAATTGCTTACCTTTATATCATTTATGCC-----------TCGTGCTGTGAATAAAGTTCA-----GTCAGACTTAGGACAATTAGGCTGACCTCGGGCAGGAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120945760 303 + 123690457 TCAGGTGTAAGTTAATGTTCCATGGGAG-GCAGGAAGAGCTTAGTGTGGATGTGGGGTGTGAGTAAATTGGAGCAAGGAT--AAGATCGTGAGATTTTCCCAGACGTGGCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGCCAGGATCTCCAAGGGAGATTCCCCTTCTAAGCTACCCA-AGTAGGAGTCCATA----GTTTTTT--------GCATCCCCTAAAATTGCTTACCTTTATATCATTTATGCC-----------TCGTGCTGTGAATAAAGTTCAATCTTGTCAGACTTAGGACAACTAGGCTGAGCTCGAGCAGGAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94701 303 + 111706 TCAGGTGTAAGTTAATATTCCCTGGGGG-GCAGGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGAT--AAGATCATGAGATTCTCCCAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCTA-AGTAGGAGTCCCTA----GTTTTTT--------GGGTCCCCTAAAATTGCTTGCCTTTATATCATGTATGCC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 125802 303 + 192460366 TCAGGTGTAAGTTAATATTCCCTGGGGG-GCAGGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGAT--AAGATCATGAGATTCTCCCAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCCCTA-AGTAGGAGTCCCTA----GTTTTTT--------GGGTCCCCTAAAATTGCTTGCCTTTATATCATGTATGCC-----------TCGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123525 302 - 187378091 TCAGGGGTAAGTTAATATTTCCTGGGGG-GCAGGAAGAGCTTAGTGTGGATGTGAGGTGTGAGCAAATTGGAGCAAGGAT--AAGATCATGAGATTctcccagactggccttgaataGAC---AGGTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGACAGATTCCCCTTCTAAGCTCCCTA-AGTAGGAGTCCC-A----GTTTTTT--------GGGTCCCCTAAAATTGCTTGCCTTTATATCATTTATGCC-----------TCGTGCTGTGAATAAAGTTCAATATTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 475220 303 - 91754291 TCAGGTGTAAGTTAATGTTCCCTGGGGG-GCAGGAAGAGCTTAGTGTGGATGTGAGGTGTGAGTAAATTGGAGCGAGGAT--AAGATCATGAGATTCTCCCAGACTGGCCTTGAATAGAC---AGCTGGGTTTGAGGCAGCAAAGTCAAGATCTCCAAGAGAGATTCCCCTTCTAAGCTCTCTA-AGTAGGAGTCCCTA----GTTTTTT--------GGGTCCCCTAAAATTGCTTGCCTTTATATCATTTATGCC-----------TTGTGCTGTGAATAAAGTTCAATCTTGCCAAACTTAGGACAACCAGGCTGAGCTGGAGCAGGAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986593 302 - 74750902 TGAGGTGTAAGTT-ATATTCCATGGGAG-GCAGAAAGAGCTTGGTGTGGATGTGGGGTGTGAGTGAACTGGAGCAAGGAT--AAGATCATGAGCTCTTCGAGGACTGGGCTTGAATAGAC---CACTGGATTTGGGGCAGCAAAGTCAGGATCTCCAAGAGAGGTTCCCTTTCTAAGCTACCCA-AGTAGGAGTCCCTA----GCTTTTT--------GGGTCCCCTAAAATTGGTTACCTCCATATCATTTATGCC-----------TCGTGCTGTGAATAAAGCTAACTCTGGTCAGACTTAGAACAACTAGGCTGAGAGAGGGCAGGAAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29115106 327 + 31377067 CCAACTTTACACTGATGCTTCATGGGGACATCTAGAAAGCTCCGTCTGGATTTGCGGTATAAGTAAATTGGACCAAGGAT--AAGATTATGACCTTCTC--AGAGTTGGC-TGAACAGACTCAGCCTGGGTTCAGGGCACTGGAGTCAAGATCCCAAAAGGAGATTTCTCTTCTAAGCTAACCAGAGTGGGAGGGCCTAGGAGGGTTTTTGGGGGGAGGGGGTTGCCAAAATTGCTGACATCCTTATAATATATGCCCTGATAGACAGTCAGGCTGCTAATTACGTTCCTTCTCACCAGACCTACAGTACCTAGA-TGAGATGGGGCAGGAgg i canFam3.chr33 C 0 I 192 e mm10.chr16 65474291 1552 - 98207768 I a score=211880.000000 s hg38.chr3_KI270935v1_alt 184955 78 + 197351 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTCCCTAGTCAGTGACCCAGC s panTro4.chr3 199823439 78 + 202329955 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTTCCTAGTCAGTGACCCAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837163 78 + 202140232 CTGGATGTTTATTAAGTTTGATTTGCCTACTCAGTCTGGACTAAAAAGGTGTGTGGATTCTCTAGTCAGTGACCCAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946063 78 + 123690457 CTGGATGTTTATTAAGTCTGATTTACCTACTCAGTCTGGACTAAAAGGGTGTGCGGATTCTCTAGTCAGCGACCCAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95004 75 + 111706 CTGGATAT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126105 75 + 192460366 CTGGATAT---TTAAGTCTGATGTGCCTCCTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 123827 75 - 187378091 CTGGATGT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGGCAGTGACCCAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 475523 75 - 91754291 CTGGATGT---TTAAGTCTGATGTGCCTACTCAGTCTGGACTAAAAAGGCGTGTGGATTCTCTAGTCCGTGACCCAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 986895 77 - 74750902 CTGGATGCTTATGAAGTCTGATTTACCTACTAAGTCTGGGCTGAAAAGGC-TGTGGGTTCTCTAGTCGGTGACCCAGC i calJac3.chr17 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29115433 192 + 31377067 I a score=313216.000000 s hg38.chr3_KI270935v1_alt 185033 105 + 197351 ATGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGCCCTGTGAAGTACAAAGCGCTGCCCTAC------CTCTCAAGTGAGCACGCTGAGGCTCCAGGAG s panTro4.chr3 199823517 105 + 202329955 ATGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGCCCCGTGAAGTACAAAGCGCTGCCCTAC------CTCTCACGTGAGCATGCTGAGGCTGCAGGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837241 105 + 202140232 ATGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGCCCCGTGAAGTACAAAGCGCTGCCCCAC------CTCTCATGTGAGCACACTGAGGCTCCAGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946141 104 + 123690457 ATGAAACCGGTCA-CTAGAGTGCCAGG-CCTGAGCCTGTCCCCACGGCCCCGTGAAGTACAAAGCGCTGCCGCAC------CTCTCACGTGAGCACGCTGAGGTTCCAGGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95079 105 + 111706 GTGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGTCCCATGAAGTGCAACGCGCTGCCCCAC------CTCTCGTGTGAGCACGCTGAGGCTCCAGGAG i rheMac3.chrUn_JH291127 C 0 I 15 s macFas5.chr2 126180 105 + 192460366 GTGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGTCCCATGAAGTGCAACGCGCTGCCCCAC------CTCTCGTGTGAGCATGCTGAGGCTCCAGGAG i macFas5.chr2 C 0 I 7 s papAnu2.chr2 123902 98 - 187378091 GTGAAGCCGGTCA-CTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGTCCCATGAAGTGCAACGCGCTGCCCCAC------CTCTCAGA-------GCTGAGGCTCCAGGAG i papAnu2.chr2 C 0 I 7 s chlSab2.chr15 475598 105 - 91754291 GTGAAGCCGGTCA-GTAGAGTGCCAGGCCCTGAGCCTGTCCCCATGGTCCCATGAAGTGCAACGCGCTGCCCCAC------CTCTCGTGTGAGCACGCTGAGGCTCCAGGAG i chlSab2.chr15 C 0 I 15 s calJac3.chr17 986972 102 - 74750902 AAGAAGTTGGTCA-CTGGAGTGCCAGGCCCTGTGCATGTGCCA--GACCCCGTGAAGTCCAAAGCACTGCCC-AC------CTCACCTGTGAGCACGCTGAGGTTCCAGGAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29115625 112 + 31377067 GTTAAGTCAGACATCGGGAGTGCCAGGTCCTGCGTGTGTCCCCATAACCCTGTGAGGTGCATGTGTCTCCCCCACCCCCGGCTCACGCGGGAGAGCATCCGGGTTCAGGGAG i canFam3.chr33 I 192 I 12 e mm10.chr16 65474291 1552 - 98207768 I a score=-12886.000000 s hg38.chr3_KI270935v1_alt 185138 3 + 197351 C------------TT- s panTro4.chr3 199823622 3 + 202329955 C------------CT- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837346 15 + 202140232 ATGAGCACGTGCGCC- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946245 15 + 123690457 ACGGGCACGTGCGCC- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 126292 3 + 192460366 -------CGT------ i macFas5.chr2 I 7 I 5 s papAnu2.chr2 124007 3 - 187378091 -------CGT------ i papAnu2.chr2 I 7 I 5 s calJac3.chr17 987074 15 - 74750902 ATGAACACGTGTGCC- i calJac3.chr17 C 0 C 0 s canFam3.chr33 29115749 3 + 31377067 -------------CCC i canFam3.chr33 I 12 C 0 e rheMac3.chrUn_JH291127 95184 15 + 111706 I e mm10.chr16 65474291 1552 - 98207768 I e chlSab2.chr15 475703 15 - 91754291 I a score=256746.000000 s hg38.chr3_KI270935v1_alt 185141 89 + 197351 CATCATCCCCGAGTCACCGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTGTTAACTCCGC-AGTTACAGCCTTCTGGGCCACACACT s panTro4.chr3 199823625 89 + 202329955 CATCATCCCCGAGTCACCGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTGCTAACTCCGC-AGTTACAGCCTTCTGGGCCACACACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837361 88 + 202140232 CATCATCCCCGAGTCACGGGCCAGGTCGGGCCATCTAGGGAAACTGGAGAGTG-TAACTCTGC-AGTTACAGCCTTCTGGGCCACATACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946260 89 + 123690457 CATCTTCCCCGAGTCACGGGCCAGGTCAGGCCATCTAGGGAAACTGGAGCGTGCTAACTCCGC-AGTTACAGCCTTCCGGGCCACACACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95199 89 + 111706 CATTATCCCCGAGTCACGGGCCAGGTCAGGCCATCTGGTGAAACTGGAGAGTGCTAACTCCAC-AATCACAGCTTTCCGGACCACACACT i rheMac3.chrUn_JH291127 I 15 I 2 s macFas5.chr2 126300 89 + 192460366 CATTATCCCCGAGTCACGGGCCAGGTCAGGCCATCTGGTGAAACTGGAGAGTGCTAACTCCAC-AATCACAGCTTTCCGGACCACACACT i macFas5.chr2 I 5 I 2 s papAnu2.chr2 124015 89 - 187378091 CATCATCCCCGAGTCACAGGGCAGGTCGGGCCATCTGGTGAAACTGGAGAGTGCTAACTCCAC-AATCACAGCTTTCCGGACCACACACT i papAnu2.chr2 I 5 M 1311 s chlSab2.chr15 475718 89 - 91754291 CATCATCCCCGAGTCACGGGCCAGGTCAGGCCATCTGGTAAAACTGGAGAGTGCTAACTCCAC-AATCACAGCTTTCCGGACCACACACt i chlSab2.chr15 I 15 I 2 s calJac3.chr17 987089 88 - 74750902 CGTGGTCACTGAGTCACGGG-CAGGTCGGGTGATCTAGGGAAACTGGAGAATGCTAACTCCCT-GGTCACAGTTTTCTGggccacacaat i calJac3.chr17 C 0 I 2 s canFam3.chr33 29115752 90 + 31377067 TGGCCTCGCGGAGTCACTGTCCAGGCTGGGCGATGAGGCGAATCGGGAGACCGTGAGCTCCCCTGATCACTCGGGCACAGGCCACGCAGG i canFam3.chr33 C 0 I 1 e mm10.chr16 65474291 1552 - 98207768 I a score=152017.000000 s hg38.chr3_KI270935v1_alt 185230 87 + 197351 GTCCcaaagctggaatttgagctctgttctgcctggctccaaagcAAAAGAAGGGCAATCACCTGGGCTGACCG--------------------------------------------------C-CCACGACATCCT s panTro4.chr3 199823714 87 + 202329955 GTCCcaaagctggaatttgagctctgttctgcctggctccaaagcAAAAGAAGGGCAATCACCTGGGCTGAGCG--------------------------------------------------C-CCATGACATCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837449 87 + 202140232 GTCCcaaagctggaatttgagctctgttctgtctggctccaaagcAAAAGAAGGGCAATCACCTGGGCTGAGTG--------------------------------------------------C-CCACGACATCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946349 87 + 123690457 GTCCcgaagctggaatttgagctctgttctgcctggctccaaagcAAAAGAAGGGCAGTCACCTGGGCTGAGCG--------------------------------------------------C-CCACGACATCGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95290 121 + 111706 GTCACAGAGCTGGAATTTGA---------------GCTCCAAAGCAAAAGAAGGACA-TCACCTGGGCTGAGCGCCCACGACATCCTCCGCTCCAGGCCATCTCCCGATCACCTGGGCTGAGCAC-CCACGACATCCT i rheMac3.chrUn_JH291127 I 2 C 0 s macFas5.chr2 126391 71 + 192460366 GTCACAGAGCTGGAATTTGA---------------GCTCCAAAGCAAAAGAAGGACA-TCACCTGGGCTGAGCG--------------------------------------------------C-CCACGACATCCT i macFas5.chr2 I 2 C 0 s chlSab2.chr15 475809 86 - 91754291 gtcacagagctggaatttgagttccattctgcctggttccaaagcAAAAGAAGGACA-TCACCTGGGCTGAGTG--------------------------------------------------C-CCACGACATCCT i chlSab2.chr15 I 2 C 0 s calJac3.chr17 987179 87 - 74750902 gccacaaagctggcatttcagctctgttctgcctggccccaaagcAAAAGAAGGGCAATCACCTGGGCTGAGCA--------------------------------------------------C-GCACGACATCCT i calJac3.chr17 I 2 I 20 s canFam3.chr33 29115843 76 + 31377067 GTCCCGGAGCTG------TAGGGCAGCCCAGGCGGCCTCCGGGCTCAGGAGGGGACG--GAACCGAGCCCAGTG--------------------------------------------------CTCCACGGAA---- i canFam3.chr33 I 1 C 0 e mm10.chr16 65474291 1552 - 98207768 I e papAnu2.chr2 124104 1311 - 187378091 M a score=274300.000000 s hg38.chr3_KI270935v1_alt 185317 149 + 197351 TCGCTCCGGGTCCTTTCCCGGTGGCAGGTGGAGACGGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagctcccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctcatgctcttct s panTro4.chr3 199823801 149 + 202329955 TCGCTCCGGGTCCTTTCCCACTGGCAGGTGGAGACAGccttttggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctcatgctcttct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837536 148 + 202140232 TTGCTCCGGGTCCTTTCATGGTGGCAGGTGGAGACGGCCTTTCAGAGGGGCCTCGCTGTccagctgcaaggatagtggttagtggacagcccccagctgc-ggccccttcagggtgggcctt-gcctttatgatgagctcatgctcttct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946436 148 + 123690457 T-ATTCCAGGTCCTTTCCCGGTGGCAGGCGGAGACGGcctttcggaggggcctcgctgtccagctgcaaggatagtggttagtggacagcccccagctgctggcccctgcagggtgggcctt-gcttttatgctgagctcatgctcttct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95411 150 + 111706 CCGCTCCGGGCCATTTCCCGGTGGCAGGTGGAGACGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacattcctcagctgctggcccctgcagggtgggccttggcttttatgctgagctcatgctcttct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126462 150 + 192460366 CCGCTCTGGGCCATTTCCCGGTGGCAGGTGGAGACGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacattcctcagctgctggcccctgcagggtgggccttggcttttatgctgagctcatgctcttct i macFas5.chr2 C 0 C 0 s chlSab2.chr15 475895 150 - 91754291 CCACTCCAGGCCATTTCCCGGTGGCAGGTGGAGACGGcctttcagaggggcctcgctgtccagctgcaaggacagtggttagtggacatcccccagctgctggcccctgcagggtgggccttggcttttatgctgagctcatgctcttct i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29115919 111 + 31377067 -------------------GGGCGCCGGCAGGGAGGGC---------------tgctgcccagctgcacaggt-gtgatgagttgaca-ccttccgcttctagctccttcgcggtgcacctcagctctca---aaacctcgcgctcttcT i canFam3.chr33 C 0 I 98 e mm10.chr16 65474291 1552 - 98207768 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=310014.000000 s hg38.chr3_KI270935v1_alt 185466 179 + 197351 ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccccacaagactccgccaacaggcagtctgcccctcagagcgccccatgggcaggagctttgtggctgtgtcagctgtgccacatcctcctgcccagcccggcctccttcttcttaCA s panTro4.chr3 199823950 179 + 202329955 ccaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccccacaagactccgccaacaggcggtctgcccctcagagcgtcccgtgggcaggagctttgtggctgtgtcagctgtgccacatcctcctgcccggcccggcctccttctccttACG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837684 178 + 202140232 ctaggtgaccctgtggccgatgactaagcaaagtggcatcacagtgacctcaccatttccaccccacaagactcctccaacaggcggtctgccccccagagcgccccatgagtaggagctctgtggctgtgtcggctgtgccacatcctcctgcccggcccggcctccttctcctcac- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946584 176 + 123690457 ccaggtgaccctgtggctgatgactcagcaaagtggcatcgcagtgacctcaccatttccacc---caagacttctccagcaagcggtctgcccctcagagcaccccatgagcaggagctatgtggctgtgtcagctgtgccacatcctcctgcccggcccggcctccttctccttaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95561 179 + 111706 ccagaagaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccccacaagactcctccaacaggcgatctGCCCCTCAGAGCATCCCACAAGCAGGAGCTTTGTGGTTGTGTCAGCTGTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126612 179 + 192460366 ccagaagaccctatggccgatgactaagcaaagtggcatcgcagtgacctcaacatttccaccccacaagactcctccaacaggcgatctGCCCCTCAGAGCATCCCACAAGCAGGAGCTTTGTGGCTGTGTCAGCTGTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTACC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476045 179 - 91754291 ccagatgaccctatggccgatgactaagcaaagtggcctcgcagtgacctcaacattttcaccccacaagactcctccaacaggcgatctgcccctcagagcatcccacgagcaggagctttgtggctgtgtcagctgtgccgcgtcctcccgcccggcccgccctccttctccttACG i chlSab2.chr15 C 0 T 42 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=66167.000000 s hg38.chr3_KI270935v1_alt 185645 79 + 197351 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACGCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCC s panTro4.chr3 199824129 79 + 202329955 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACACAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCC i panTro4.chr3 C 0 I 10 s ponAbe2.chr3 199837862 78 + 202140232 cAGATGCCACATCCTCCTGCCCGGCCCAGCCTCCTTCTCCTCAC-CAGATGCCACATCCTCCTGTCCGGCCCGGCCTCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95740 79 + 111706 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126791 79 + 192460366 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCGCCTGGCCCGGCCTCC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=4944.000000 s hg38.chr3_KI270935v1_alt 185724 10 + 197351 TTCTCCTTAC s ponAbe2.chr3 199837940 10 + 202140232 TTCTCCTCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95819 10 + 111706 TTCTCCCTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126870 10 + 192460366 TTCTCCTTAC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824208 10 + 202329955 I a score=38.000000 s hg38.chr3_KI270935v1_alt 185734 1 + 197351 G s rheMac3.chrUn_JH291127 95829 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126880 1 + 192460366 G i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199837950 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824208 10 + 202329955 I a score=14876.000000 s hg38.chr3_KI270935v1_alt 185735 18 + 197351 CAGGTGCCACATCCTCCT s panTro4.chr3 199824218 18 + 202329955 CAGGTGCCACATCCTCCT i panTro4.chr3 I 10 I 31 s ponAbe2.chr3 199837950 18 + 202140232 CAGATGTCACATCCTCCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95830 18 + 111706 CAGGTGCCACGTCCTCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126881 18 + 192460366 CAGGTGCCACGTCCTCCC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=12546.000000 s hg38.chr3_KI270935v1_alt 185753 28 + 197351 GCCCAGCCCGGCCTCCTTCTCCTTACGC s ponAbe2.chr3 199837968 27 + 202140232 GCCCGGCCCGGCCTCCTTCTCCTCAC-C i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95848 28 + 111706 ACCCGGCCCAGCCTCCTTCTCCCTACAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126899 28 + 192460366 GCCCGGCCCGGCCTCCTTCTCCCTACGC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824236 31 + 202329955 I a score=1422.000000 s hg38.chr3_KI270935v1_alt 185781 2 + 197351 AG s panTro4.chr3 199824267 2 + 202329955 AG i panTro4.chr3 I 31 C 0 s ponAbe2.chr3 199837995 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95876 2 + 111706 AG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126927 2 + 192460366 AG i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476224 42 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=45561.000000 s hg38.chr3_KI270935v1_alt 185783 40 + 197351 GTGCCACATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTA s panTro4.chr3 199824269 44 + 202329955 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199837997 40 + 202140232 ATACCACATCCTCCTGTCCGGCCCGGCCT----CCTTCTCCTCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95878 40 + 111706 GTGCCACGTCCTCCCACCCGGCCCAGCCT----CCTTCTCCCTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126929 40 + 192460366 GTGCCACGTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCTTA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476182 40 - 91754291 gtgccgcgtcctcccgcccggcccgccct----ccttctccttA i chlSab2.chr15 T 42 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=1000.000000 s hg38.chr3_KI270935v1_alt 185823 1 + 197351 C s panTro4.chr3 199824313 1 + 202329955 C i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95918 1 + 111706 C i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126969 1 + 192460366 C i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476222 1 - 91754291 C i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838037 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=14266.000000 s hg38.chr3_KI270935v1_alt 185824 11 + 197351 GCAGGTGCCAC s panTro4.chr3 199824314 10 + 202329955 -CAGGTGCCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838037 11 + 202140232 GCAGATGCCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95919 11 + 111706 ACAGGTGCCAC i rheMac3.chrUn_JH291127 C 0 T 225 s macFas5.chr2 126970 11 + 192460366 GCAGGTGCCAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476223 11 - 91754291 GCAGGTGCCAC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=35252.000000 s hg38.chr3_KI270935v1_alt 185835 34 + 197351 ATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCCTAC s panTro4.chr3 199824324 38 + 202329955 ATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC i panTro4.chr3 C 0 T 144 s ponAbe2.chr3 199838048 29 + 202140232 ATCCTCCTGCCCGGCCT---------CCTTCTCCTCAC i ponAbe2.chr3 C 0 T 40 s rheMac3.chrUn_JH291127 95705 34 + 111706 GTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCCTAC i rheMac3.chrUn_JH291127 T 225 C 0 s macFas5.chr2 126981 34 + 192460366 GTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCTTAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476234 34 - 91754291 ATCCGCCCGCCCGGCCCGGCCT----CCTTCTCCCTAC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=205.000000 s hg38.chr3_KI270935v1_alt 185869 1 + 197351 G s ponAbe2.chr3 199838037 1 + 202140232 G i ponAbe2.chr3 T 40 C 0 s rheMac3.chrUn_JH291127 95739 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127015 1 + 192460366 A i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476268 1 - 91754291 G i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824362 144 + 202329955 T a score=58358.000000 s hg38.chr3_KI270935v1_alt 185870 55 + 197351 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTACGCAGGTGCCAC s panTro4.chr3 199824218 58 + 202329955 CAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACG-AGGTGCCAC i panTro4.chr3 T 144 C 0 s ponAbe2.chr3 199838038 49 + 202140232 CAGATGCCACATCCTCCTGCCCGGCCT---------CCTTCTCCTCACC-AGATGCCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95740 55 + 111706 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCCTACACAGGTGCCAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127016 55 + 192460366 TAGGTGCCACATCCTCCTGCCTGGCCCAGCCT----CCTTCTCCTTACGCAGGTGCCAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476269 55 - 91754291 CAGGTGCCACATCCTCCCGCCCGGCCTGGCct----ccttctccttacacaggtgccac i chlSab2.chr15 C 0 T 113 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=26080.000000 s hg38.chr3_KI270935v1_alt 185925 34 + 197351 ATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTAC s panTro4.chr3 199824276 38 + 202329955 ATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838087 34 + 202140232 ATCCTCCTGCCCGGCCCGGCCT----CCTTCTCCTCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95795 34 + 111706 GTCCTCCCGCCCGGCCCGGCCT----CCTTCTCCCTAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127071 34 + 192460366 ATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTAC i macFas5.chr2 C 0 T 90 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=68036.000000 s hg38.chr3_KI270935v1_alt 185959 101 + 197351 GCAGGTGCCACATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTACGCAGGTGCCACATCCTCCTGCCCAGCCCGGCCT----CCTTCTCCTTACGCAGGTGCCAC s panTro4.chr3 199824314 106 + 202329955 -CAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACG-AGGTGCCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838121 93 + 202140232 -CAGATGCCACATCCTCCTGCCCGGCCCGGCCT----CCTTCTTCTCAC-CAGGTGCCACATCCTCCTGCCCGGCCT---------CCTTCTCCTCACC-AGATGCCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95829 101 + 111706 ACAGGTGCCACGTCCTCCCACCCGGCCCAGCCT----CCTTCTCCCTACACAGGTGCCACGTCCTCCCACCCGGCCCAGCCT----CCTTCTCCCTACACAGGTGCCAC i rheMac3.chrUn_JH291127 C 0 T 90 s macFas5.chr2 127015 101 + 192460366 ATAGGTGCCACATCCTCCTGCCTGGCCCAGCCT----CCTTCTCCTTACGCAGGTGCCACATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTACGCAGGTGCCAC i macFas5.chr2 T 90 T 90 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=9616.000000 s hg38.chr3_KI270935v1_alt 186060 12 + 197351 ATCCTCCTGCCC s panTro4.chr3 199824420 12 + 202329955 ATCCTCCTGCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838214 12 + 202140232 ATCCTCCTGCCC i ponAbe2.chr3 C 0 I 43 s rheMac3.chrUn_JH291127 95840 12 + 111706 GTCCTCCCACCC i rheMac3.chrUn_JH291127 T 90 C 0 s macFas5.chr2 127026 12 + 192460366 ATCCTCCTGCCT i macFas5.chr2 T 90 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=61068.000000 s hg38.chr3_KI270935v1_alt 186072 78 + 197351 AGCCCGGCCT----CCTTCTCCTTACGCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACACAGGTGCCAC s panTro4.chr3 199824432 81 + 202329955 AGCCTGGCCTCCGCCCTTCTCCTTAC-CAGGTGCCACAtcctcctgcccagcccggcctccttctccttaagcaggtgccac i panTro4.chr3 C 0 T 45 s ponAbe2.chr3 199838269 78 + 202140232 GGCCCGGCCT----CCTTCTCCTTAAGCAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAAGCAGGTGCCAC i ponAbe2.chr3 I 43 C 0 s rheMac3.chrUn_JH291127 95852 78 + 111706 GGCCCAGCCT----CCTTCTCCCTACACAGGTGCCACGTCCTCCCACCCGGCCCAGCCTCCTTCTCCCTACACAGGTGCCAC i rheMac3.chrUn_JH291127 C 0 T 45 s macFas5.chr2 127038 78 + 192460366 GGCCCAGCCT----CCTTCTCCTTACGCAGGTGCCACATCCTCCCACCCGGCCCGGCCTCCTTCGCCTTACGCAGGTGCCAC i macFas5.chr2 C 0 T 45 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=22422.000000 s hg38.chr3_KI270935v1_alt 186150 34 + 197351 ATCCTCCTGCCCAGCCCGGCCTCCTTTTCCTTAC s panTro4.chr3 199824468 34 + 202329955 Atcctcctgcccagcccggcctccttctccttaa i panTro4.chr3 T 45 C 0 s ponAbe2.chr3 199838347 29 + 202140232 ATCCTCCTGCCCA-----GCCTCCTTCTCCTCAC i ponAbe2.chr3 C 0 I 44 s rheMac3.chrUn_JH291127 95885 34 + 111706 GTCCTCCCACCCGGCCCAGCCTCCTTCTCCCTAC i rheMac3.chrUn_JH291127 T 45 C 0 s macFas5.chr2 127071 34 + 192460366 ATCCTCCCACCCGGCCCGGCCTCCTTCGCCTTAC i macFas5.chr2 T 45 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=67.000000 s hg38.chr3_KI270935v1_alt 186184 1 + 197351 A s panTro4.chr3 199824502 1 + 202329955 g i panTro4.chr3 C 0 T 285 s rheMac3.chrUn_JH291127 95919 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127105 1 + 192460366 G i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838376 44 + 202140232 I e nomLeu3.chr11 120946760 0 + 123690457 C a score=9206.000000 s hg38.chr3_KI270935v1_alt 186185 10 + 197351 CAGGTGCCAC s panTro4.chr3 199824218 10 + 202329955 CAGGTGCCAC i panTro4.chr3 T 285 C 0 s ponAbe2.chr3 199838420 10 + 202140232 CAGATGCCAC i ponAbe2.chr3 I 44 C 0 s rheMac3.chrUn_JH291127 95920 10 + 111706 CAGGTGCCAC i rheMac3.chrUn_JH291127 C 0 T 51 s macFas5.chr2 127106 10 + 192460366 CAGGTGCCAC i macFas5.chr2 C 0 T 45 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=15391.000000 s hg38.chr3_KI270935v1_alt 186195 39 + 197351 ATCCTCCTGCTCAGCCCGGCCTCCGCCCTTCTCCTTACG s panTro4.chr3 199824228 39 + 202329955 ATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTACG i panTro4.chr3 C 0 T 179 s ponAbe2.chr3 199838430 35 + 202140232 ATCCTCCTGCCCGGCCCGGCCT----CCTTCTCCTTAAG i ponAbe2.chr3 C 0 T 515 s macFas5.chr2 127071 35 + 192460366 ATCCTCCCACCCGGCCCGGCCT----CCTTCGCCTTACG i macFas5.chr2 T 45 C 0 e rheMac3.chrUn_JH291127 95930 51 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=902.000000 s hg38.chr3_KI270935v1_alt 186234 4 + 197351 CAGA s ponAbe2.chr3 199837950 4 + 202140232 CAGA i ponAbe2.chr3 T 515 C 0 s macFas5.chr2 127106 4 + 192460366 CAGG i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 95930 51 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824267 179 + 202329955 T a score=5296.000000 s hg38.chr3_KI270935v1_alt 186238 6 + 197351 TGCCAC s panTro4.chr3 199824088 6 + 202329955 tgccac i panTro4.chr3 T 179 C 0 s ponAbe2.chr3 199837954 6 + 202140232 TGTCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95879 6 + 111706 TGCCAC i rheMac3.chrUn_JH291127 T 51 C 0 s macFas5.chr2 127110 6 + 192460366 TGCCAC i macFas5.chr2 C 0 T 90 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=18731.000000 s hg38.chr3_KI270935v1_alt 186244 22 + 197351 ATCCTCCTGCCCGGCCCGGCCT s panTro4.chr3 199824094 22 + 202329955 atcctcctgcccggcccggcct i panTro4.chr3 C 0 I 151 s ponAbe2.chr3 199837960 22 + 202140232 ATCCTCCTGCCCGGCCCGGCCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95885 22 + 111706 GTCCTCCCACCCGGCCCAGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127026 22 + 192460366 ATCCTCCTGCCTGGCCCAGCCT i macFas5.chr2 T 90 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=1200.000000 s hg38.chr3_KI270935v1_alt 186266 2 + 197351 CC s ponAbe2.chr3 199837982 2 + 202140232 CC i ponAbe2.chr3 C 0 I 171 s rheMac3.chrUn_JH291127 95907 2 + 111706 CC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127048 2 + 192460366 CC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824116 151 + 202329955 I a score=2522.000000 s hg38.chr3_KI270935v1_alt 186268 11 + 197351 TTCTCCTTACC- s ponAbe2.chr3 199838155 11 + 202140232 TTCTTCTCACC- i ponAbe2.chr3 I 171 C 0 s rheMac3.chrUn_JH291127 95909 12 + 111706 TTCTCCCTACAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127050 12 + 192460366 TTCTCCTTACGC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824116 151 + 202329955 I a score=8730.000000 s hg38.chr3_KI270935v1_alt 186279 9 + 197351 AGGTGCCAC s panTro4.chr3 199824267 9 + 202329955 AGGTGCCAC i panTro4.chr3 I 151 C 0 s ponAbe2.chr3 199838166 9 + 202140232 AGGTGCCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95921 9 + 111706 AGGTGCCAC i rheMac3.chrUn_JH291127 C 0 T 232 s macFas5.chr2 127062 9 + 192460366 AGGTGCCAC i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=2748.000000 s hg38.chr3_KI270935v1_alt 186288 7 + 197351 ATCCTCC- s panTro4.chr3 199824276 7 + 202329955 ATCCTCC- i panTro4.chr3 C 0 T 47 s ponAbe2.chr3 199838175 7 + 202140232 ATCCTCC- i ponAbe2.chr3 C 0 I 1 s macFas5.chr2 127071 8 + 192460366 ATCCTCCC i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=5330.000000 s hg38.chr3_KI270935v1_alt 186295 14 + 197351 GCCCAGCCTGGCCT s panTro4.chr3 199824236 14 + 202329955 GCCCAGCCTGGCCT i panTro4.chr3 T 47 C 0 s ponAbe2.chr3 199838183 9 + 202140232 -----GCCCGGCCT i ponAbe2.chr3 I 1 C 0 s macFas5.chr2 127079 14 + 192460366 ACCCGGCCCGGCCT i macFas5.chr2 C 0 T 135 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=-120.000000 s hg38.chr3_KI270935v1_alt 186309 4 + 197351 CCGC s panTro4.chr3 199824250 4 + 202329955 CCGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838192 2 + 202140232 CC-- i ponAbe2.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e macFas5.chr2 127093 135 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=600.000000 s hg38.chr3_KI270935v1_alt 186313 2 + 197351 CC s panTro4.chr3 199824254 2 + 202329955 CC i panTro4.chr3 C 0 T 48 s macFas5.chr2 126958 2 + 192460366 CC i macFas5.chr2 T 135 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838194 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=17578.000000 s hg38.chr3_KI270935v1_alt 186315 42 + 197351 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCTCAGCCTGGCCT s panTro4.chr3 199824208 42 + 202329955 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 T 48 C 0 s ponAbe2.chr3 199838194 37 + 202140232 TTCTCCTCAC-CAGATGCCACATCCTCCTGCCC-----GGCCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126960 43 + 192460366 TTCTCCTTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 T 254 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=4941.000000 s hg38.chr3_KI270935v1_alt 186357 19 + 197351 CCGCCCTTCTCCTTACAAG s panTro4.chr3 199824250 19 + 202329955 CCGCCCTTCTCCTTACGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838231 19 + 202140232 CCGCCCTTCTCCTTACCAG i ponAbe2.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e macFas5.chr2 127003 254 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=32719.000000 s hg38.chr3_KI270935v1_alt 186376 79 + 197351 GTGCCACATCCTCCTGCTCAGCCTGGCCTCCGCCGTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCC s panTro4.chr3 199824269 79 + 202329955 GTGCCACATCCTCCTGCCCAGCCTGGCCTCCGCCCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCTCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838250 74 + 202140232 ATGCCACATCCTCCTGCCCGGCCCGGCCTCC----TTCTCCTTAAGCAGGTGCCACATCCTCCTGCCCGGCCCGGCCT-- i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126749 76 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCC----TTCTCCTTACCCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 T 254 I 223 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=200.000000 s hg38.chr3_KI270935v1_alt 186455 2 + 197351 GC s panTro4.chr3 199824348 2 + 202329955 GC i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e macFas5.chr2 126825 223 + 192460366 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838324 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=6159.000000 s hg38.chr3_KI270935v1_alt 186457 13 + 197351 CCTTCTCCTTACG s panTro4.chr3 199824350 13 + 202329955 CCTTCTCCTTACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838324 13 + 202140232 CCTTCTCCTTAAG i ponAbe2.chr3 C 0 T 44 s macFas5.chr2 127048 13 + 192460366 CCTTCTCCTTACG i macFas5.chr2 I 223 I 1 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=16343.000000 s hg38.chr3_KI270935v1_alt 186470 31 + 197351 AGGTGCCACATCCTCCTGCCCAGCCTGGCCT s panTro4.chr3 199824363 31 + 202329955 AGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838293 31 + 202140232 AGGTGCCACATCCTCCTGCCCGGCCCGGCCT i ponAbe2.chr3 T 44 C 0 s macFas5.chr2 127062 31 + 192460366 AGGTGCCACATCCTCCCACCCGGCCCGGCCT i macFas5.chr2 I 1 T 344 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=3470.000000 s hg38.chr3_KI270935v1_alt 186501 17 + 197351 CCGCCCTTCTCCTTACG s panTro4.chr3 199824394 17 + 202329955 CCGCCCTTCTCCTTACG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838324 13 + 202140232 ----CCTTCTCCTTAAG i ponAbe2.chr3 C 0 T 111 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e macFas5.chr2 127093 344 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=191.000000 s hg38.chr3_KI270935v1_alt 186518 2 + 197351 AG s panTro4.chr3 199824411 2 + 202329955 AG i panTro4.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e macFas5.chr2 127093 344 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838337 111 + 202140232 T e nomLeu3.chr11 120946760 0 + 123690457 C a score=5746.000000 s hg38.chr3_KI270935v1_alt 186520 24 + 197351 GTGCCACATCCTCCTGCCCAGCCT s panTro4.chr3 199824413 24 + 202329955 GTGCCACATCCTCCTGCCCAGCCT i panTro4.chr3 C 0 C 0 s macFas5.chr2 126749 24 + 192460366 GTGCTACGTCCTCCCGCCCGGCCC i macFas5.chr2 T 344 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838337 111 + 202140232 T e nomLeu3.chr11 120946760 0 + 123690457 C a score=3786.000000 s hg38.chr3_KI270935v1_alt 186544 11 + 197351 GGCCTCCGCCC s panTro4.chr3 199824437 11 + 202329955 GGCCTCCGCCC i panTro4.chr3 C 0 T 48 s ponAbe2.chr3 199838226 11 + 202140232 GGCCTCCGCCC i ponAbe2.chr3 T 111 C 0 s macFas5.chr2 126773 7 + 192460366 GGCCTCC---- i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=4449.000000 s hg38.chr3_KI270935v1_alt 186555 13 + 197351 TTCTCCTTACCAG- s panTro4.chr3 199824400 13 + 202329955 TTCTCCTTACGAG- i panTro4.chr3 T 48 C 0 s ponAbe2.chr3 199838237 13 + 202140232 TTCTCCTTACCAG- i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126780 14 + 192460366 TTCTCCTTACCCAG i macFas5.chr2 C 0 T 45 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=11099.000000 s hg38.chr3_KI270935v1_alt 186568 24 + 197351 GTGCCACATCCTCCTGCTCAGCCT s panTro4.chr3 199824413 24 + 202329955 GTGCCACATCCTCCTGCCCAGCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838250 24 + 202140232 ATGCCACATCCTCCTGCCCGGCCC i ponAbe2.chr3 C 0 T 290 s macFas5.chr2 126749 24 + 192460366 GTGCTACGTCCTCCCGCCCGGCCC i macFas5.chr2 T 45 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=1353.000000 s hg38.chr3_KI270935v1_alt 186592 9 + 197351 GGCCTCCGC s panTro4.chr3 199824437 9 + 202329955 GGCCTCCGC i panTro4.chr3 C 0 C 0 s macFas5.chr2 126773 7 + 192460366 GGCCTCC-- i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 113 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838274 290 + 202140232 T e nomLeu3.chr11 120946760 0 + 123690457 C a score=600.000000 s hg38.chr3_KI270935v1_alt 186601 2 + 197351 CC s panTro4.chr3 199824446 2 + 202329955 CC i panTro4.chr3 C 0 C 0 s chlSab2.chr15 476211 2 - 91754291 cc i chlSab2.chr15 T 113 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126780 0 + 192460366 C e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838274 290 + 202140232 T e nomLeu3.chr11 120946760 0 + 123690457 C a score=50101.000000 s hg38.chr3_KI270935v1_alt 186603 65 + 197351 TTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTACGCAGGTGCCAC s panTro4.chr3 199824448 65 + 202329955 TTCTCCTTAC-CAGGTGCCACAtcctcctgcccagcccggcctccttctccttaagcaggtgccac i panTro4.chr3 C 0 T 163 s ponAbe2.chr3 199837984 64 + 202140232 TTCTCCTCAC-CGGATACCACATCCTCCTGTCCGGCCCGGCCTCCTTCTCCTCA-GCAGATGCCAC i ponAbe2.chr3 T 290 C 0 s macFas5.chr2 126780 66 + 192460366 TTCTCCTTACCCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476213 66 - 91754291 ttctccttACGCAGGTGCCACATCCGCCCGCCCGGCCCGGCCTCCTTCTCCCTACGCAGGTGCCAC i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=5539.000000 s hg38.chr3_KI270935v1_alt 186668 11 + 197351 ATCCTCCTGCC s ponAbe2.chr3 199838048 11 + 202140232 ATCCTCCTGCC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126846 11 + 192460366 GTCCTCCCGCC i macFas5.chr2 C 0 T 108 s chlSab2.chr15 476279 11 - 91754291 ATCCTCCCGCC i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824513 163 + 202329955 T a score=673.000000 s hg38.chr3_KI270935v1_alt 186679 6 + 197351 CGGCCT----- s ponAbe2.chr3 199838059 6 + 202140232 CGGCCT----- i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476290 11 - 91754291 CGGCCTGGCct i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126857 108 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824513 163 + 202329955 T a score=6966.000000 s hg38.chr3_KI270935v1_alt 186685 15 + 197351 CCTTCTCCTTAC-CAG s panTro4.chr3 199824350 15 + 202329955 CCTTCTCCTTAC-CAG i panTro4.chr3 T 163 C 0 s ponAbe2.chr3 199838065 15 + 202140232 CCTTCTCCTCAC-CAG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476301 16 - 91754291 ccttctccttacacag i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95930 232 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126857 108 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=8518.000000 s hg38.chr3_KI270935v1_alt 186700 7 + 197351 GTGCCAC s panTro4.chr3 199824365 7 + 202329955 GTGCCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838080 7 + 202140232 ATGCCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95698 7 + 111706 GTGCTAC i rheMac3.chrUn_JH291127 T 232 C 0 s macFas5.chr2 126749 7 + 192460366 GTGCTAC i macFas5.chr2 T 108 C 0 s chlSab2.chr15 476317 7 - 91754291 gtgccac i chlSab2.chr15 C 0 T 122 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=18785.000000 s hg38.chr3_KI270935v1_alt 186707 22 + 197351 ATCCTCCTGCCCAGCCCGGCCT s panTro4.chr3 199824372 22 + 202329955 ATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 C 0 T 307 s ponAbe2.chr3 199838087 22 + 202140232 ATCCTCCTGCCCGGCCCGGCCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95705 22 + 111706 GTCCTCCCGCCCGGCCCGGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126756 22 + 192460366 GTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=6056.000000 s hg38.chr3_KI270935v1_alt 186729 15 + 197351 CCTTCTCCTTAC-CAG s ponAbe2.chr3 199838109 15 + 202140232 CCTTCTCCTCAC-CAG i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95727 16 + 111706 CCTTCTCCCTACACAG i rheMac3.chrUn_JH291127 C 0 T 45 s macFas5.chr2 126778 16 + 192460366 CCTTCTCCTTACCCAG i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824394 307 + 202329955 T a score=67216.000000 s hg38.chr3_KI270935v1_alt 186744 87 + 197351 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACGCAGGTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTACA s panTro4.chr3 199824087 87 + 202329955 gtgccacatcctcctgcccggcccggcctccttctccttACGCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACA i panTro4.chr3 T 307 C 0 s ponAbe2.chr3 199838124 80 + 202140232 ATGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTTCTCAC-CAGGTGCCACATCCTCCT-----GCCCGGCCTCCTTCTCCTCAC- i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95698 87 + 111706 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACA i rheMac3.chrUn_JH291127 T 45 I 45 s macFas5.chr2 126794 87 + 192460366 GTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCGCCTGGCCCGGCCTCCTTCTCCTTACG i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=55398.000000 s hg38.chr3_KI270935v1_alt 186831 76 + 197351 CAGATGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC-CAGGTGCCACATCCTTCTGCCCGGCCCGGCCT s panTro4.chr3 199824174 76 + 202329955 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 C 0 T 44 s ponAbe2.chr3 199838204 74 + 202140232 CAGATGCCACATCCTCCTGCCCGGCCT-CCGCCCTTCTCCTTAC-CAGATGCCACATCCTCCTGCCCGGCCCGGCC- i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95830 77 + 111706 CAGGTGCCACGTCCTCCCACCCGGCCCAGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCACCCGGCCCAGCCT i rheMac3.chrUn_JH291127 I 45 C 0 s macFas5.chr2 126881 77 + 192460366 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=6510.000000 s hg38.chr3_KI270935v1_alt 186907 12 + 197351 CCTTCTCCTTAC s panTro4.chr3 199824206 12 + 202329955 CCTTCTCCTTAC i panTro4.chr3 T 44 C 0 s rheMac3.chrUn_JH291127 95907 12 + 111706 CCTTCTCCCTAC i rheMac3.chrUn_JH291127 C 0 T 134 s macFas5.chr2 126958 12 + 192460366 CCTTCTCCTTAC i macFas5.chr2 C 0 I 1 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838278 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=4479.000000 s hg38.chr3_KI270935v1_alt 186919 18 + 197351 CGGGTGCCACATCCTCCT s panTro4.chr3 199824218 18 + 202329955 CAGGTGCCACATCCTCCT i panTro4.chr3 C 0 C 0 s macFas5.chr2 126971 18 + 192460366 CAGGTGCCACGTCCTCCC i macFas5.chr2 I 1 T 240 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476324 122 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838278 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=1514.000000 s hg38.chr3_KI270935v1_alt 186937 9 + 197351 GCCCGGCCT s panTro4.chr3 199824236 9 + 202329955 GCCCAGCCT i panTro4.chr3 C 0 T 116 s ponAbe2.chr3 199838278 1 + 202140232 --------T i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476202 9 - 91754291 gcccgccct i chlSab2.chr15 T 122 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126989 240 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=2128.000000 s hg38.chr3_KI270935v1_alt 186946 12 + 197351 CCTTCTCCTTA-C s ponAbe2.chr3 199838279 13 + 202140232 CCTTCTCCTTAAG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476211 12 - 91754291 ccttctccttA-C i chlSab2.chr15 C 0 I 1 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126989 240 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824245 116 + 202329955 T a score=1746.000000 s hg38.chr3_KI270935v1_alt 186958 3 + 197351 CAG s panTro4.chr3 199824129 3 + 202329955 CAG i panTro4.chr3 T 116 C 0 s ponAbe2.chr3 199838292 3 + 202140232 CAG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476224 3 - 91754291 CAG i chlSab2.chr15 I 1 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126989 240 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=50882.000000 s hg38.chr3_KI270935v1_alt 186961 60 + 197351 GTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTATGCAGGTGCCACATCCTCCT s panTro4.chr3 199824132 60 + 202329955 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACACAGGTGCCACATCCTCCT i panTro4.chr3 C 0 T 18 s ponAbe2.chr3 199838295 60 + 202140232 GTGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAAGCAGGTGCCACATCCTCCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126749 60 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTACCCAGGTGCCACGTCCTCCC i macFas5.chr2 T 240 C 0 s chlSab2.chr15 476227 60 - 91754291 GTGCCACATCCGCCCGCCCGGCCCGGCCTCCTTCTCCCTACGCAGGTGCCACATCCTCCC i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=2607.000000 s hg38.chr3_KI270935v1_alt 187021 5 + 197351 GCCCG s ponAbe2.chr3 199838355 5 + 202140232 GCCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126809 5 + 192460366 GCCCG i macFas5.chr2 C 0 T 65 s chlSab2.chr15 476287 5 - 91754291 GCCCG i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824192 18 + 202329955 T a score=1173.000000 s hg38.chr3_KI270935v1_alt 187026 4 + 197351 GCCT s ponAbe2.chr3 199838360 4 + 202140232 GCCT i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 476292 4 - 91754291 GCCT i chlSab2.chr15 C 0 T 72 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 126814 65 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824192 18 + 202329955 T a score=1024.000000 s hg38.chr3_KI270935v1_alt 187030 12 + 197351 CCTTCTCCTTAC s ponAbe2.chr3 199838364 12 + 202140232 CCTTCTCCTCAC i ponAbe2.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476296 72 - 91754291 T e macFas5.chr2 126814 65 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824192 18 + 202329955 T a score=873.000000 s hg38.chr3_KI270935v1_alt 187042 3 + 197351 CAG s panTro4.chr3 199824174 3 + 202329955 CAG i panTro4.chr3 T 18 C 0 s ponAbe2.chr3 199838376 3 + 202140232 CAG i ponAbe2.chr3 C 0 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476296 72 - 91754291 T e macFas5.chr2 126814 65 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=820.000000 s hg38.chr3_KI270935v1_alt 187045 3 + 197351 GTA s panTro4.chr3 199824177 3 + 202329955 GTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838379 3 + 202140232 ATA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 126749 3 + 192460366 GTG i macFas5.chr2 T 65 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476296 72 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=6617.000000 s hg38.chr3_KI270935v1_alt 187048 26 + 197351 CCACATCCTCCTGCCCAGCCCGGCCT s panTro4.chr3 199824180 26 + 202329955 CCACATCCTCCTGCCCAGCCCGGCCT i panTro4.chr3 C 0 T 119 s macFas5.chr2 126752 26 + 192460366 CTACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476296 72 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=1146.000000 s hg38.chr3_KI270935v1_alt 187074 12 + 197351 CCTTCTCCTTAC s macFas5.chr2 126778 12 + 192460366 CCTTCTCCTTAC i macFas5.chr2 C 0 I 1 e rheMac3.chrUn_JH291127 95919 134 + 111706 T e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476296 72 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824206 119 + 202329955 T a score=1746.000000 s hg38.chr3_KI270935v1_alt 187086 3 + 197351 CAG s rheMac3.chrUn_JH291127 95785 3 + 111706 CAG i rheMac3.chrUn_JH291127 T 134 T 90 s macFas5.chr2 126791 3 + 192460366 CAG i macFas5.chr2 I 1 T 45 s chlSab2.chr15 476224 3 - 91754291 CAG i chlSab2.chr15 T 72 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824206 119 + 202329955 T a score=75438.000000 s hg38.chr3_KI270935v1_alt 187089 87 + 197351 GTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACGCAGGTGCCACATCCTCCTGCCCGGCCTGGCCTCCTTCTCCTTACA s panTro4.chr3 199824087 87 + 202329955 gtgccacatcctcctgcccggcccggcctccttctccttACGCAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTACA i panTro4.chr3 T 119 C 0 s rheMac3.chrUn_JH291127 95698 87 + 111706 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACA i rheMac3.chrUn_JH291127 T 90 C 0 s macFas5.chr2 126749 87 + 192460366 GTGCTACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTACCCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACA i macFas5.chr2 T 45 C 0 s chlSab2.chr15 476227 87 - 91754291 GTGCCACATCCGCCCGCCCGGCCCGGCCTCCTTCTCCCTACGCAGGTGCCACATCCTCCCGCCCGGCCTGGCctccttctccttaca i chlSab2.chr15 C 0 T 132 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=36466.000000 s hg38.chr3_KI270935v1_alt 187176 76 + 197351 CAGATGCCACTTCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAC-AAGGTGCCACATCCTCCTGCCCAGCCCGGCCT s panTro4.chr3 199824174 76 + 202329955 CAGGTGCCACATCCTCCTGCCCAGCCCGGCCTCCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 C 0 T 44 s rheMac3.chrUn_JH291127 95785 77 + 111706 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCCTACACAGGTGCCACGTCCTCCCACCCGGCCCAGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126836 77 + 192460366 CAGGTGCCACGTCCTCCCGCCTGGCCCGGCCTCCTTCTCCTTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476314 132 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=20744.000000 s hg38.chr3_KI270935v1_alt 187252 44 + 197351 CCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCGGCCCAGCCT s panTro4.chr3 199824206 44 + 202329955 CCTTCTCCTTAC-CAGGTGCCACATCCTCCTGCCCAGCCTGGCCT i panTro4.chr3 T 44 T 121 s rheMac3.chrUn_JH291127 95862 45 + 111706 CCTTCTCCCTACACAGGTGCCACGTCCTCCCACCCGGCCCAGCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126913 45 + 192460366 CCTTCTCCCTACGCAGGTGCCACGTCCTCCCGCCCGGCCCGGCCT i macFas5.chr2 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476314 132 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=2932.000000 s hg38.chr3_KI270935v1_alt 187296 12 + 197351 CCTTCTTCTTAC s rheMac3.chrUn_JH291127 95907 12 + 111706 CCTTCTCCCTAC i rheMac3.chrUn_JH291127 C 0 I 1 s macFas5.chr2 126958 12 + 192460366 CCTTCTCCTTAC i macFas5.chr2 C 0 T 179 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476314 132 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C e panTro4.chr3 199824250 121 + 202329955 T a score=1746.000000 s hg38.chr3_KI270935v1_alt 187308 3 + 197351 CAG s panTro4.chr3 199824129 3 + 202329955 CAG i panTro4.chr3 T 121 C 0 s rheMac3.chrUn_JH291127 95920 3 + 111706 CAG i rheMac3.chrUn_JH291127 I 1 C 0 s macFas5.chr2 126791 3 + 192460366 CAG i macFas5.chr2 T 179 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476314 132 - 91754291 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=6332.000000 s hg38.chr3_KI270935v1_alt 187311 7 + 197351 GTGCCAC s panTro4.chr3 199824132 7 + 202329955 GTGCCAC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95923 7 + 111706 GTGCCAC i rheMac3.chrUn_JH291127 C 0 T 225 s macFas5.chr2 126794 7 + 192460366 GTGCCAC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476182 7 - 91754291 gtgccgc i chlSab2.chr15 T 132 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=19816.000000 s hg38.chr3_KI270935v1_alt 187318 24 + 197351 ATCCTCCTGCCCGGCCCGGCCTCG s panTro4.chr3 199824139 24 + 202329955 ATCCTCCTGCCCAGCCCGGCCTCC i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95705 24 + 111706 GTCCTCCCGCCCGGCCCGGCCTCC i rheMac3.chrUn_JH291127 T 225 C 0 s macFas5.chr2 126801 24 + 192460366 GTCCTCCCGCCCGGCCCGGCCTCC i macFas5.chr2 C 0 I 45 s chlSab2.chr15 476189 24 - 91754291 gtcctcccgcccggcccgccctcc i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=14979.000000 s hg38.chr3_KI270935v1_alt 187342 17 + 197351 TTCTCCTTACACAGGTG s panTro4.chr3 199824163 17 + 202329955 TTCTCCTTACACAGGTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95729 17 + 111706 TTCTCCCTACACAGGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 126870 17 + 192460366 TTCTCCTTACGCAGGTG i macFas5.chr2 I 45 C 0 s chlSab2.chr15 476213 17 - 91754291 ttctccttACGCAGGTG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838382 0 + 202140232 C e nomLeu3.chr11 120946760 0 + 123690457 C a score=15762.000000 s hg38.chr3_KI270935v1_alt 187359 13 + 197351 CCACATCCTCCTG s panTro4.chr3 199824180 13 + 202329955 CCACATCCTCCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838382 13 + 202140232 CCACATCCTCCTG i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 95746 13 + 111706 CCACGTCCTCCCG i rheMac3.chrUn_JH291127 C 0 I 338 s macFas5.chr2 126887 13 + 192460366 CCACGTCCTCCCG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476230 13 - 91754291 CCACATCCGCCCG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=21055.000000 s hg38.chr3_KI270935v1_alt 187372 15 + 197351 CCCGGCCCGGCCTCC s panTro4.chr3 199824193 15 + 202329955 CCCAGCCCGGCCTCC i panTro4.chr3 C 0 I 240 s ponAbe2.chr3 199838395 15 + 202140232 TCCGGCCCGGCCTCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 96097 15 + 111706 CCCGGCCCGGCCTCC i rheMac3.chrUn_JH291127 I 338 C 0 s macFas5.chr2 126900 15 + 192460366 CCCGGCCCGGCCTCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476243 15 - 91754291 CCCGGCCCGGCCTCC i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=13223.000000 s hg38.chr3_KI270935v1_alt 187387 10 + 197351 TTCTCCTTAC s panTro4.chr3 199824448 10 + 202329955 TTCTCCTTAC i panTro4.chr3 I 240 C 0 s ponAbe2.chr3 199838410 10 + 202140232 TTCTCCTTAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 96112 10 + 111706 TTCTCCTTAC i rheMac3.chrUn_JH291127 C 0 I 1 s macFas5.chr2 126915 10 + 192460366 TTCTCCCTAC i macFas5.chr2 C 0 I 1 s chlSab2.chr15 476258 10 - 91754291 TTCTCCCTAC i chlSab2.chr15 C 0 I 46 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=37320.000000 s hg38.chr3_KI270935v1_alt 187397 44 + 197351 CAGGTGCCACAtcctcctgcccagcccggcctccttctccttaa s panTro4.chr3 199824458 44 + 202329955 CAGGTGCCACAtcctcctgcccagcccggcctccttctccttaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838420 44 + 202140232 CAGATGCCACATCCTCCTGCCCGGCCCGGCCTCCTTCTCCTTAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 96123 44 + 111706 CAGGTGCCACGTCCTCCCACCCGGCCCGGCCTCCTTCGCCTTAC i rheMac3.chrUn_JH291127 I 1 C 0 s macFas5.chr2 126926 44 + 192460366 CAGGTGCCACGTCCTCCCGCCCGGCCCGGCCTCCTTCTCCTTAC i macFas5.chr2 I 1 I 135 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476268 46 - 91754291 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=1000.000000 s hg38.chr3_KI270935v1_alt 187441 1 + 197351 g s panTro4.chr3 199824502 1 + 202329955 g i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838464 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 96167 1 + 111706 G i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127105 1 + 192460366 G i macFas5.chr2 I 135 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476268 46 - 91754291 I e papAnu2.chr2 124104 1311 - 187378091 M e nomLeu3.chr11 120946760 0 + 123690457 C a score=358882.000000 s hg38.chr3_KI270935v1_alt 187442 208 + 197351 caggtgccactcccctatag----ccttcacattccttccaccaactcagcatttgcttctgggaggacccgacCCGAGACACTCACGTAAAAGAGGATGCCCACGTACAGATGTGGCAGCAGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaatctttcctcctCTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG s panTro4.chr3 199824503 208 + 202329955 caggtgccactcccctatag----ccttcacattccttccaccaactcagcatttgcttctgggaggacccgacctgagacaCTCACGTAAAAGAGGATGCCCACGTACAGATGTGGAAGCAGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaatctttcctcctCTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838465 208 + 202140232 CAGGTGCCACTCCCCTATAG----CCTTCGCATTCCTTCCACCAGCTCAGCATTTGCTTCTGGGAGGACTCAACCCTAGACACTCACGTAAAAGAGGATGCCCATGTACAGATGTGGAAGCCGGCCCTCCAagctgggattcagacccaggtcagcatgactccaaaacctgtcctcctCTGCGGCTCCTTATTCCACAGTTCAGGAAGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946760 208 + 123690457 caggtgccactcccctatag----ccttcacattccttccaccagctcagcatttgcttctgggaggacccgacCCGAGACACTCACATAAAAGAGGATGCCCATTTACAGACGTGGAAGCTGGCCCTCCTagctgggattcagacccaggtcagctcgactccaaaacctgtcctcctCTGCAGCTCCTTATTCCATGGTTCAGCAGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96168 211 + 111706 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCAGCTCAGCATTTGCTTCCAGGAGGACCTGACCCGAGACACTCACTTAAAACAGGATGCCCGTGTACAGATGTGGAAGCTGGGCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcctct-cagctctgtattccacAGTTCAGCAGGGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127106 212 + 192460366 CAGGTGCCACTCCCCTATAGCCTCCCTCCACATTCCTTCCACCAGCTCAGCATTTGCTTCCAGGAGGACCTGACCCGAGACACTCACTTAAAACAGGATGCCCGTGTACAGATGTGGAAGCTGGTCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctgtcctcctccGCAGCTCTGTATTCCACGGTTCAGCAGGGAG i macFas5.chr2 C 0 I 3 s chlSab2.chr15 476314 211 - 91754291 caggtgccactcccctatagcctccctccacattccttccaccagctcagcgtttgcttccaggaggaccAGACCCGAGACACTCACTTAAAACAGGA-GCCCGGGTACAGATGTGGAAGCTGGCCCTCCgagctgggattcagacccaggtcagcacgactccaaaacctatcctcctccGCAGCTCTGTATTCCACGGTTCAGCAGGGAG i chlSab2.chr15 I 46 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=4500.000000 s hg38.chr3_KI270935v1_alt 187650 3 + 197351 GCG s panTro4.chr3 199824711 3 + 202329955 GCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838673 3 + 202140232 GCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946968 3 + 123690457 GCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96379 3 + 111706 GCG i rheMac3.chrUn_JH291127 C 0 C 0 s chlSab2.chr15 476525 3 - 91754291 GCG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e macFas5.chr2 127318 3 + 192460366 I e papAnu2.chr2 124104 1311 - 187378091 M a score=28864.000000 s hg38.chr3_KI270935v1_alt 187653 19 + 197351 GGCGGGCTG-GAGGCCCCGG s panTro4.chr3 199824714 19 + 202329955 GGCGGGCTG-GAGGCCCCGG i panTro4.chr3 C 0 I 211 s ponAbe2.chr3 199838676 19 + 202140232 GGTTGGCTG-GAGGCCCCGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946971 20 + 123690457 CGTGGGCTGTGGGGCCCCTG i nomLeu3.chr11 C 0 I 1 s rheMac3.chrUn_JH291127 96382 19 + 111706 GGTGGGCTG-GGGGCCCCGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127321 19 + 192460366 GGTGGGCTG-GGGGCCCCGG i macFas5.chr2 I 3 C 0 s chlSab2.chr15 476528 19 - 91754291 GGTGGGCTG-GGGCCCCCGG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=72592.000000 s hg38.chr3_KI270935v1_alt 187672 46 + 197351 CACCTGCTGTATGTGGTCTCTATCCGAGGCCATGGTGAAAGCAGGG s panTro4.chr3 199824944 46 + 202329955 CACCTGCTGTATGTGGTCTCTATCCGAGGCCATGGTGAAAGCAGGG i panTro4.chr3 I 211 C 0 s ponAbe2.chr3 199838695 34 + 202140232 CACCTGCTGTATGTGGTCCCTGTCCGAGGCCACG------------ i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120946992 46 + 123690457 CACCTGCTGTATGTGGTCCCTATCCGAGGCCATGGCGAAAGCAGGT i nomLeu3.chr11 I 1 C 0 s rheMac3.chrUn_JH291127 96401 46 + 111706 CACCTGCTGTGTATGGTCCCTATCCGAGGCCACGATGAAAGCAGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127340 46 + 192460366 CACCTGCTGTGTGTGGTCCCTATCCGAGGCCACGACGAAAGCAGGG i macFas5.chr2 C 0 T 68 s chlSab2.chr15 476547 46 - 91754291 CACCTGCTGTGTGTGGTCCCTATCCGAGGCCACGATGAAAGCAGGG i chlSab2.chr15 C 0 C 0 e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=573.000000 s hg38.chr3_KI270935v1_alt 187718 2 + 197351 AG s panTro4.chr3 199824990 2 + 202329955 AG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120947038 2 + 123690457 AG i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 96447 0 + 111706 C e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476593 0 - 91754291 C e macFas5.chr2 127386 68 + 192460366 T e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838729 0 + 202140232 C a score=9646.000000 s hg38.chr3_KI270935v1_alt 187720 35 + 197351 GTGGGTGGGCTG-------------------------------------------------------------------------GGGGCCC-AGCACCTGCTGTATGT s panTro4.chr3 199824992 36 + 202329955 GTGGGTGGGCTG-------------------------------------------------------------------------GGGGCCCGGGCACCTGCTGTATGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120947040 109 + 123690457 GCGGGCGGGCTGTGGGGCCCCTGGTACCTGCTGTATGTGGTCCCTATCCGAGGCCATGGCGAAAGCAGGTAGGCGGGCGGGCTGTGGGGCCCCGGCACCTGCTGTATGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 127318 36 + 192460366 GCGGGTGGGCTG-------------------------------------------------------------------------GGGGCCCCGGCACCTGCTGTGTGT i macFas5.chr2 T 68 C 0 e rheMac3.chrUn_JH291127 96447 0 + 111706 C e mm10.chr16 65474291 1552 - 98207768 I e canFam3.chr33 29116030 98 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476593 0 - 91754291 C e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838729 0 + 202140232 C a score=2187.000000 s hg38.chr3_KI270935v1_alt 187755 3 + 197351 GGC s panTro4.chr3 199825028 3 + 202329955 GGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120947149 3 + 123690457 GGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 127354 3 + 192460366 GGT i macFas5.chr2 C 0 C 0 s canFam3.chr33 29116128 3 + 31377067 GGC i canFam3.chr33 I 98 C 0 e rheMac3.chrUn_JH291127 96447 0 + 111706 C e mm10.chr16 65474291 1552 - 98207768 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 476593 0 - 91754291 C e papAnu2.chr2 124104 1311 - 187378091 M e ponAbe2.chr3 199838729 0 + 202140232 C a score=138308.000000 s hg38.chr3_KI270935v1_alt 187758 103 + 197351 CTCTAT-CTGAGGCCATG----------------------------------------------------------------------GCGAAAGCAGGGGCCCTGGTACTAGGGTCACACAAA---GGCCACTGTCATTCTCTTGGGATTCGGTTTCT-----CCTTTCCCTAAAAGTGCC s panTro4.chr3 199825031 173 + 202329955 CTCTAT-CTGAGGCCATGGCGAAAGCAGGGAGGCGGGAGGGCTGGGGGGCCGGGCACCTGCTGTGTGTGGTCTCTATCCGAGGCCACAGCGAAAGCAGGGGCCCTAGTACTAGGGTCACACAAA---GGCCACTGTCATTCTCTTGGGATTCGGTTTCT-----CCTTTCCCTAAAAGTGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838729 86 + 202140232 ----------------------------------------------------------------------------------------GTGAAAGCAGGCGCCCTGGTACTAGGGTCACACAAA---GGCCACTGTCATTCTCTTGGGACTCGGTTTCT-----CCTTTCTCTAAAAATGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120947152 103 + 123690457 CTCTAT-CCGAGGCCACG----------------------------------------------------------------------GAGAAAGCAGGGGCCCTGGTGCTAGGGCCACACAAA---GGCCACTGTCGTTCTCTTGGGATTCAGTTGCT-----CCTTTCTCTAAAAGTGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96447 77 + 111706 ----------------------------------------------------------------------------------------------------GCCCTGGTACTAGGGCCACACAAAAAGAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127357 106 + 192460366 CCCTAT-CCGAGGCCACG----------------------------------------------------------------------ACGAAAGCAGGGGCCCTGGTACTAGGGCCACACAAAAAGAGCCAGTGTCATTCTCTTGGGTTTGAGTTTCT-----CCATTCTCTAAAAGTGCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476593 77 - 91754291 ----------------------------------------------------------------------------------------------------GCCCTGGTACTAGGGCCACACAACAAAAGCCAGAGTCATTCTCTTGGGTTTGGGTTTCT-----CCTTTCTCTAAAAGTGCC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65475843 100 - 98207768 CTCTGTCCCAAGTCCACG----------------------------------------------------------------------GAGAAGGCG-----TTTGGCATTTGGGCCGCACAAA------GACAGTCCTCCTCCCAGGATTGAGTTTCTCAGCCCCTTTCTCT-GAAGTGCC i mm10.chr16 I 1552 C 0 s canFam3.chr33 29116131 109 + 31377067 CTCGGCTCCCAGACCCCG----------------------------------------------------------------------GGGAAAGTGGGGGCCCTGGCGTTTGGGCCACATAAA---GGCCCCCATCATTCTTCCAAGATGGGGTTTCTCAGCCCACGTCTTTAAAAGTGCC i canFam3.chr33 C 0 I 103 e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=329683.000000 s hg38.chr3_KI270935v1_alt 187861 176 + 197351 AAGCATTCTCACGCCAATTAGCTCATTTCCTGTCTCATCTCACCTCTGTGGTGGAGCAGGGCATGATTTTTACGCATGCAACGTCTTCTTACG-GGCATCCCTGTGAAGCAG-GGCCACCCC-----------GGG-GCACAGGAGG--------GCCTGGAGG------------TCCAGGGATCTAAACTCATTCCATTCACCCAGCC s panTro4.chr3 199825204 176 + 202329955 AAGCATTCTCACGCCAATTAGCTCATTTCCTGTCTCATCTCACCTCTGTGGTGGAGCAGGGCATGATTTCTACGCACGCAACGTCTTCTTACG-GGCATCCCCGTGAAGCAG-GGCCACCCC-----------GGG-GCACAGGAGG--------GCCTGGAGG------------TCCAGGGATCTCAACTCATTCCATTCACCCAGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838815 175 + 202140232 AAGCATTCTCACA-CAATTAGCTCATTTCCCGTCTCATCTCACCTCTGTGGTGGAGCAGGGCATGAGGCCTACGCACGCAACATCTTCTTACC-GGCATCCCCGTGGAGCAG-GGCCACCCC-----------GGG-GCACAGGAGG--------GCCTGGAGG------------TCTAGGGATCTAAACTCATTCCATTCACCCAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120947255 175 + 123690457 AAGCGTTCTCACACCGATGAGCTCATTTCCCATCTCATCTCACCTCTGT-GTGGAGCGGGACATGATGCCTACGCATGCAACGTCTTCTTACG-GGCATCCCCGTGAAGCAG-GGCCACCCC-----------AGG-GCACAGGAGG--------GCCTAGAGG------------TCCAGGGATCTAAACTCATTCCATTCACCCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96524 175 + 111706 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATCTTACCTCTGTGGTGGAGTGGGACACGATGCCTACACACACAACGTCTTCTTGAG-GGCGTCCCCGTGAAGCAG-GGCC-TCCC-----------GGG-GCACAGGAGG--------GCCTGGAGG------------CCCAGGGATCTAAACCCATTCCATCCACCCAGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127463 175 + 192460366 AAGCATTCTCACGCCAATTAGCTCATGTCCCATCTCATCTTACCTCTGTGGTGGAGTGGGACACGATGCCTACACACACAACGTCTTCTTGAG-GGCGTCCCCGTGAAGCAG-GGCC-TCCC-----------GGG-GCACAGGAGG--------GCCTGGAGG------------CCCAGGGATCTAAACCCATTCCATCCACCCAGCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476670 176 - 91754291 AAGCATTCTCACGCCAATTAGCTCATGTCCCGTCTCATTTTACCTCTGTGGTGGAGTGGGACATGATGCCTACACACGCCACGTCTTCTTGAG-GGCGTCCCCGTGAAGCAG-GGCCACCCC-----------GGG-GCAGAGGAAG--------GCCTGGAGG------------CCCAGGGATCTAAACCCATTCCATCCACCTAGCC i chlSab2.chr15 C 0 C 0 s mm10.chr16 65475943 151 - 98207768 AAGCATTTTCTTAGCGATTAGCTCACTTCTCTTTAC------------------------------------------CAACATCT--GGGCA-AGCGTCCCCATGAACCAG-GGGCTGCTTTGGGTGCGCAGGAG-GCATAGGAGGCCAGGGTTGGCTTAAAG------------CCCAGGAATCTCAAATTGTTCAGTTAGGCCAGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 29116343 188 + 31377067 GAGCATCTTCATGCCAATTAGCTCAGTTCCT-TCTCATTTGACTTCTGAGGCATTGGGGGGCATAATGCTTACCCCAGCAGCATCTTCCTGCCTGGGGTCTCTGTGAAGGGGAAGCCGCCCT-----------GAGTGTGCAGGCAG--------AGATCGAGGGGAGATACTGACTCAGGGGCCCCCAAGTC--TGCATTTACCCATCC i canFam3.chr33 I 103 I 203 e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=204132.000000 s hg38.chr3_KI270935v1_alt 188037 102 + 197351 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCAAGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGGGCT s panTro4.chr3 199825380 102 + 202329955 TTAAGGAGAA-GAAAACCGAGGCCAGGAAGTCAGCAAGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTTGTGGGGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199838990 78 + 202140232 TT-------------------------AAGTCAGCGAGAACATGAAGTCGGTGACCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGGGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120947430 102 + 123690457 TTAAGGAGAA-GAAAACTGAGGCAGGGAAGTCAGCGAGAGCACGAAGTCGGTGACCCAGCCTCCGGGTCCCTGGGTTGGCCGCCTGTGTCCTTCGGTGGGGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96699 102 + 111706 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCGAGAACGTGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGGGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127638 102 + 192460366 TTAAGGAGAA-GAAAGCCCAGGCCAGGAAGTCAGCGAGAACGTGAAGTCGGTGAGCCAGCATCCAGGTCCCCGGATTTGCCACCTGTGTCCTTTGGTGGGGCT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476846 102 - 91754291 TTAAGGAGAA-GAAAACCAAGGCCAGGAAGTCAGCGAGAACAGGAAGTTGGTGAGCCAGCATCCAGGTCCCTGGATTTGCCACCTGTGTCCTTTGGTGGGGCT i chlSab2.chr15 C 0 C 0 s mm10.chr16 65476094 102 - 98207768 TTAGTCAGAAGGAAGACCTAGGCCAGGAAGTTCACCGCAACAGCAAGTGGGAAAGAC-GTATCCAAGCCCTCCAACTTACCACCCCCATCCTACTGCTGGGCT i mm10.chr16 C 0 I 1750 s canFam3.chr33 29116734 102 + 31377067 TTAAAGGGAA-GAAAACCAAGGCCAGGAAGGTAACCACAGGGCTAAGTCAAAAACCCAGCTCCTTGGGCCCCAGATTTGCTCTCCGTGTCCTACACTTAGGTT i canFam3.chr33 I 203 C 0 e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=1119786.000000 s hg38.chr3_KI270935v1_alt 188139 606 + 197351 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtcatccgaagccctcattctaccgtggaggaggtgtgggcccagagagaagggag-gtccttgttggcgcagccggtgagcggcagggtgtgtcccggagcccgggtttccagcgccctctctgtcttgct-gccgagcGTCCACGTCTGTTCGGTTGTCTTTGCACACTCCTGGCTCCCAG---TTAGACCGCTGCTCCCAGGCGGAACGTCTGCCACAGGGGACACGTACATGCGGCCACCATGGGGACTGAATG----------------------AGGGTGGGCCCACAAAGCTCTCCAACGCGGGGTTCTGACAGAAAGCCCAACCCGGGCCGAAAGCCATCTTTTAAAATGAAGTTTAC-------TGGGtttcttttttcattat-aaagtaatgcacactgtccacag-agatatgaaaa-tatttaaaagtagagagaagaaaaa--catcatcaatgtttcaccacccaggaacaaccctattaacgcgttgagagatttctggcttgtttctcatacataGCTCATATCCATAGTTTAAATCTATC--ATATCCTAGATATA s panTro4.chr3 199825482 605 + 202329955 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgaccatgtcgtccgaagccctcattctaccgtggaggaggtgtgggcccagagagaagggag-gtcctcgctggcgcagccggtgagtggcagg-tgtgtcccggagcccgggtttccagcgccctctctgtcttgct-gccgagcGTCCACGTCTGTTCGGTTGTCTTTGCACGCTCCTGGCTCCCAG---TTACACCGCTGCTCCCAGGCGGAATGTCTGCCACAGGGGACACATACATGCGGCCACCATGGGGACTGAATG----------------------AGGGTGGGCCCACAAAGCTCTCCAATGCGGGGTTCTGACAGAAAGCCCAACCCAGGCCGAAAGCCATCTTTTAAAATAAAGTTTAC-------TGGGTTTCTTTTTTCATTAT-AAAGTAATGCACACTGTCCACAG-AGATATGAAAA-TATTTAAAAGTAGAGAGAAGAAAAA--CATCATCAATGTTTCAGCACCCAGGAACAACCCTATTAATGCGTTGAGAGATTTCCGGCTTGTTTCTCATACACAGCTCATACCCATAGTTTAAATCTATC--ATATCCTAGATATA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839068 626 + 202140232 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacataattttaaaactggaagagaccctggtgactgtgtcgtccgaagtcctcattctaccgtggaggaagtgtgggcccggagagaagggag-gtcctcgttggcacagccggtgagcggcagg-tgcgtcccggagcccgggtttccggcgccctctctgtC-TGCT-GCCAAGCGTCCACGTCTGTTCGGTTGTTTTTGCACACTCCTGGCTCCCAG---TTAGACCGCTGCTCCCAGGCGGAACCTCTGCCACAGGGGACACATACATGCGGTCACCATGGGGACCAAATGAGGGTGGGCCATCTTCTCAGACAGGGTGGGCCCACAAAGCTCTCCAACGCGGGGTTCTGACAGAAAGCCCAACCCAGGCCGAAAGCCGTCTTTTAAAATAAAGTTTAC-------TGGGtttcttttttcattat-aaagtaatgcacactgtccatgg-agatatgaaaa-tacttaaaagtagagagaagaaaaa--catcatcaatgtttcaccacccaggaacaaccctattaatgcgttgagagatttctggcttgttcctcatacataGCTCATATCCATAGTTTAAATCTATC--ATATCCTAGATATA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120947532 598 + 123690457 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacgtaattttaaaactggaagagaccctggtgaccgtgtcgtccgaagtcctcattctaccgcgggggaggtgtgggcccagagagaagggag-gtcctcgttggcgcagccggtgagcggcagg-tgcgtcccggagcccgggtttccggcgccctctctgtcttgct-gcCGAGTGTCCACGTCCGTTCGGTTGTCTTTGCACACTCCTGGCTCCCAG---TTAGACCGCTGCTCCCAGGCGGAACCTCTGCCACAGGGGACACGTACATGTAGCCACCATGGGGAC----------------------------AAGGTGGGCCCACAAAGCTCTCCAAC-CGGGGTTCTGACAGAAAGCCCAACCCAGGCCGAAAGCCATCTTTTAAAATAAAGTTTAC-------TGCGTTTCTTTTTCCATTAT-AAAGTAATGCACACTCTGCACAG-AGATATGAAAA-TACTTAAACGTAGAGAGAAGAAAAA--CATCATCAACGTTTCACCACCCAGGAACAACCCTACCAACGCGTTGAGAGAGTTCTGGCTTGTTCCTCATACATAGCTCATATCCATGGTTTAAATCTATC--ATATCCTAGATATA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96801 622 + 111706 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgggcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccggagcccgggtttccggcgccttctctgtcttgct-gctgagcGTCCACGTCCGTTTGGTTGCCTTTGCACACTCCTGGCTCCCGG---TGAGACCACTGATCCCAGGCTGAACCTCTGCCGCAGCGG-CACGTACATGTGGCCACCATGGGGACTGAATGGGGGTGGGCCATCTTCCCGGACAGGGTGGGCCCACAAAGCTCTTCGACGTGGGATTCTGACAGAAAGCCCAACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTAC-------TGGGT---TTTTACCATGGT-AAAGTAATGCACACTCTCCACAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAGAAAAA--CATCATTGATGTCTCGCCACCCTAGAACAAGCC-ACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATAGTTTAAATCGGTC--GTATCCTAGATACA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 127740 622 + 192460366 TCCCTTTGTAAAGCTTGAAAgaataagaggatcttaacatgattttaaaactggaagagaccctggtgaccgtgtcgtccaaagtcctcattctactgtgggggaggtgtgggcccagggggaagggag-gccctcgttggcacagccggcgagcggcagg-tgcgtcccggagcccgggtttccggcgccttctctgtcttgct-gccgagcGTCCACGTCCGTTTGGTTGCCTTTGCACACTCCTGGCTCCCGG---TGAGACCACTGATCCCAGGCTGAACCTCTGCCGCAGCGG-CACGTACATGTGGCCACCATGGGGACTGAATGGGGGTGGGCCATCTTCCCGGACAGGGTGGGCCCACAAAGCTCTTCGACGTGGGATTCTGACAGAAAGCCCAACCCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTAC-------TGGGT---TTTTACCATGGT-AAAGTAATGCACACTCTCCACAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAGAAAAA--TGTCATTGATGTCTCGCCACCCTAGAACAAGCC-ACTAACGCGCTGAGAGAGCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATAGTTTAAATCGGTC--GTATCCTAGATACA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 476948 618 - 91754291 TCCCTTTGTAAAGCTTGAAAgaataagaggattttaa-atgattttaaaactggaagagaccctggtgaccatgtcgtccaaagtcctcattctactgtgggggaggtgtgggcccagggggaagggag-gccctcgttggcacagccggcgagcagcagg-tgcgtcccggagcccaggtttccggcgccttctctgtcttgct-gccgagcGTCCACGTCCGTTTGGTTGCCTTTGCACACTCCTGGCTGCCGG---TGAGAGCGCTGATCCCAGGCTGAACCTCTGCCGCAGCGA-CACGTACATGTGGTCACCGTGGGGACAGAATGGGGGCGGGCCATCTTCCCAGACGGG--GGGCCCACAAAGCTCCTCAACGCGGGATTCTGACAGAAAGCCCAA-CCAGGCCAAAAGCCATCTTTTAAAATAAAGTTTAC-------TGGGT---TTTTTCCATTAT-AAAGTAATGCACACTCTCCATAG-AGACATGAAAA-CACTTGAAAGTAGAGAGAAGAAAAA--CATCATCGATGTGTCGCCACCCTAGAACAAGCC-ACTAACGCACTGAGAGGTCTCTGGCTTTTTCCTCAAACACAGCTCAGAGCCATGGTTTAAATCGGTC--GTATCCTAGATACA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29116836 622 + 31377067 TCTCTCTCTAAATTCTGAAAGACAAAGAGAA-CTCAGCGTCACTttaggactggaagagacctgggcgatcgtgtggt-cacactccccattgtacccgggaggacgtgcaggcccagagggaagggagcatccgagttcacagagtccatgagtggcaCG-TGT------GGGTCCACGTTTCCCGTGCTCATTTGGCTTTGCTCTCCGGCCTCCCACGTTTATCCGGTTGTTCTGGCACATTCCTGGCACCCCGACCAGAGACC-TTGCCCCTAGTGCCAACCCCGTGCTCACAGGCCACACTCA---GGCCA----------TGAATAATGGCGACTGTCCCGCTCACGCTGGACGGCCAGCTGACGCCTCCGACCTCAGCCTTCTGACGGAGAGTCCTGGCCAGCCTAAAGAC--TCTTTTAAAATAAAGCTTACCAGTTGTTGGGtttttttccccattataaaagtaatataggcccattatagcaaatatggaaactatttcaaagtaaagagaaaaaaaaaccatcaccaatgattcaccaccgagaaaaacctgcctaaatacattgataggtttctagcctcttccccatgaatggctcgtacacacagttttaatctatcatatatcaTGGATACA i canFam3.chr33 C 0 I 1 e mm10.chr16 65476196 1750 - 98207768 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=71175.000000 s hg38.chr3_KI270935v1_alt 188745 48 + 197351 GTTTGATCTCCTCTTTACCACCTAACtttatttattta----tttatttatt s panTro4.chr3 199826087 52 + 202329955 GTTTGATCTCCTCTTTACCACCTAACtttatttatttacttatttatttatt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839694 44 + 202140232 GTTCGATCTCCTCTTTACCACCTAACtttattta--------tttatttatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948130 43 + 123690457 GTTCGATCTCCTCTTTACCACCTAAC-TTACtta--------tttatttatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97423 48 + 111706 GTTTGGCCTCCTCGTTACCACCTAACtttatttattta----tttatttatt i rheMac3.chrUn_JH291127 C 0 I 134 s macFas5.chr2 128362 48 + 192460366 GTTTGGCCTCCTCGTTACCACCTAACtttatttattta----tttatttatt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 477566 48 - 91754291 GTTTGGCCTCCTCGTTACCACCTAACTCtatttattta----tttatttatt i chlSab2.chr15 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e papAnu2.chr2 124104 1311 - 187378091 M a score=726.000000 s hg38.chr3_KI270935v1_alt 188793 2 + 197351 ca s panTro4.chr3 199826139 2 + 202329955 ta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839738 2 + 202140232 ta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948173 2 + 123690457 ta i nomLeu3.chr11 C 0 C 0 e rheMac3.chrUn_JH291127 97471 134 + 111706 I e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e calJac3.chr17 987266 20 - 74750902 I e chlSab2.chr15 477614 0 - 91754291 C e macFas5.chr2 128410 0 + 192460366 C e papAnu2.chr2 124104 1311 - 187378091 M a score=87203.000000 s hg38.chr3_KI270935v1_alt 188795 68 + 197351 ttt--ttattatt----------------tatttatttattttgagacagagtctcgctctgtcacccaggctggagtgcagtggt s panTro4.chr3 199826141 68 + 202329955 ttt--ttattatt----------------tatttatttattttgagacagagtctcgttctgtcacccaggctggagtgcagtggt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839740 68 + 202140232 tct--ttattatc----------------tatttatttattttgagacagagtctcgctctgtcacccaggctggagtgcagtggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948175 70 + 123690457 ttttatttatatt----------------tatttatttattttgagacacagtctcgctctgttgcccaggctagagtgcagtggt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 128410 57 + 192460366 -----------------------------ttattatttattttgagacggagtctggctctgtggcccaggctggagtgcggtggc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 477614 81 - 91754291 -----tatttatttatttatttattttattaattatttattttgagacggagtctcgctctgtcgcccaggctggagtgcagtgac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987286 67 - 74750902 ttc--tttttctt----------------ttttttttttttttgagacggagtct-gttctgtcacccaggctggagtgcagtggc i calJac3.chr17 I 20 C 0 e rheMac3.chrUn_JH291127 97471 134 + 111706 I e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e papAnu2.chr2 124104 1311 - 187378091 M a score=338308.000000 s hg38.chr3_KI270935v1_alt 188863 160 + 197351 gcgatcttggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggattataggctcgtgcccccatgcctggctaa--tttttgtattttcagtagagacggggtttcaccatgttggtcaggctggtccca s panTro4.chr3 199826209 160 + 202329955 gcgatctcggctcactgcaacctccgcctcctgggttcatgccattctcctgcctcagcctcccgagtagctgggattataggctcgtgcccccatgcctggctaa--tttttgtattttcagtagagacggggtttcaccatgttggtcaggctagtccca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839808 160 + 202140232 gcgatctcggctcactgaaacctccacctcctgggttcacaccattctcctgcctcagcctcccgagtagctgggattataggctcgtgcccctgtgcctggctaa--tttttgtatttttagtggagacggggtttcaccacattgttcaggctggtccca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948245 160 + 123690457 gtgatcttggctcactgcaacctccgcctcctgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggctcatgcccccatgcctggctaa--tttttgtatttttggtagagacggggtttcaccatgttggttgggctggtctca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97605 158 + 111706 gcgatctcggctcactgcaagctccacctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgc-cgccaccacaccgggctaa--tttttgtgttttc-gtagagatggggtttcaccatgttggtcaggctggtctca i rheMac3.chrUn_JH291127 I 134 C 0 s macFas5.chr2 128467 158 + 192460366 gcgatctcggctcactgcaagctccacctcccgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcgc-cgccaccacaccgggctaa--tttttgtgttttc-gtagagacggggtttcaccatgttggtcaggctggtctca i macFas5.chr2 C 0 C 0 s chlSab2.chr15 477695 158 - 91754291 gcgatctcaactcaccacaagctccgcctcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgc-cgccaccacacccggctaa--tttttgtgttttc-gtagagacaaggtttcaccatgttgatcaggctggtctca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987353 162 - 74750902 acgatctcagctcactgcaacctccacctcctgggttcaagtgattctcctgcctcagcctcccgagtaggtgggattacaggcacccactaccacacctggctaaattttttgtatttttagtagagatggggtttgagcatgttggtcaggctggtctcg i calJac3.chr17 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I e papAnu2.chr2 124104 1311 - 187378091 M a score=225726.000000 s hg38.chr3_KI270935v1_alt 189023 76 + 197351 aactcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccgggc s panTro4.chr3 199826369 76 + 202329955 aactcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgcgccaggc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199839968 76 + 202140232 aactcctgaccttgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccacggcgcccggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948405 76 + 123690457 aactcctgaccttgtgatccacccgccttggcctcgcaaagtgctgggattacaggcgtgagccaccgcgcccggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97763 76 + 111706 aaatcctgaccttgtgatccacctgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 128625 76 + 192460366 aactcctgaccttgtgatccacctgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125420 76 - 187378091 AACTCCTGaacctgtgatccgcccgccttggcctcccaaaatgctgggattacaggcgtgagccaccatgcccggc i papAnu2.chr2 M 1311 C 0 s chlSab2.chr15 477853 76 - 91754291 aactcctgaccttgtgatccgcccgccttggcctcccaaaatgctgggattacaggcatgagccaccatgcccggc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987515 75 - 74750902 aactcctgaccttgtgatctgcccgccttggcccctcaaagtgctgggattacaggtgtgagcc-ctgcgcccggc i calJac3.chr17 C 0 C 0 e mm10.chr16 65476196 1750 - 98207768 I e canFam3.chr33 29117458 1 + 31377067 I a score=87733.000000 s hg38.chr3_KI270935v1_alt 189099 51 + 197351 cATGACCTAGCTTTAAACCTAAAAGTCTC-CCCAATTATTATAAA-ACTCCAT s panTro4.chr3 199826445 51 + 202329955 cATGACCTAGCTTTAAACCTAAAAGTCTC-CCCAATTATTATAAA-ACTCCAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840044 51 + 202140232 cATGACCTAGCTTTAAACCTAAATGTCTC-CCCAATTATTACAAA-ACTCCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948481 50 + 123690457 cACGACCTAGCTTT-AGCCTAAATGTCTC-CCCAGTTATTACAAA-ACTCTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97839 51 + 111706 cCCCATCTAACTTTAAACCTAAACACCTC-CCCCATTATTACAAA-ACTTCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 128701 51 + 192460366 cCCCATCTAACTTTAAACCTAAACACCTC-CCCCATTATTACAAA-ACTTCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125496 51 - 187378091 ccccaccTAACTTTAAACCTAAACGTCTC-CCCCATTATTACAAA-ACTTCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 477929 51 - 91754291 cCCCACCTAATTTTAAACCTAAACGTCTC-CCCCATTATTACAAA-ACTTCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987590 5 - 74750902 c------------------------------------------------TCAT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29117459 53 + 31377067 CACCACGTAAGGTTAAACCCGAGCATTTCTTCCTGTCAGTATGAACACGTCAG i canFam3.chr33 I 1 C 0 e mm10.chr16 65476196 1750 - 98207768 I a score=241462.000000 s hg38.chr3_KI270935v1_alt 189150 83 + 197351 TCACACATTTCTGAAGGCCACGTGATACTGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT s panTro4.chr3 199826496 83 + 202329955 TCACACATTTCTGAAGGCCACGTGATACTGCATTGGCTA----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGG-CGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840095 83 + 202140232 TCACACATTTCTGAAGGCCACGTGATACTGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTACTCTCGG-CGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948531 83 + 123690457 TCACACATTTCTGAAGGCCACGTGATACGGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAT-TGTGTTATTCACGG-CGT i nomLeu3.chr11 C 0 M 319 s rheMac3.chrUn_JH291127 97890 84 + 111706 TCACACATTTCCAAAGGCCACATGATACTGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACGGTCGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 128752 84 + 192460366 TCACACATTTCCAAAGGCCACGTGATACTGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACAGTCGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125547 84 - 187378091 TCACACATTTCCGAAGGCCATGTGATACTGCATTGGCTG----CCACCATAACTGAAC----------TAACTTGGACAC-TGGGTTATTCACAGTCGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 477980 84 - 91754291 TCACACATTTCTGAAGGCCACGTGATACTGCATTGGCTG----CCACCATAACTGAAC----------TCACTTGGACAC-TGGGTTATTCACGGTCGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987595 82 - 74750902 TCGCACTTTTCTAAAGGCCACGTGATATTGCATTGACTG----CCATCGTATCTGAAC----------TAACTCGGACAT---GGTTATTCTCGGTCAC i calJac3.chr17 C 0 C 0 s mm10.chr16 65477946 88 - 98207768 TCACATACTTTTAAAGACAACATAATACGCCACCGAATG----CCACCATG--TGCACCCTGTGTATATAACTTGTTTAAATGAGTCAGACAGT----- i mm10.chr16 I 1750 I 2 s canFam3.chr33 29117512 73 + 31377067 TCACGTA----CAAATTTCTCATGACATTCCATCGAGTGGACTCTACCATA--TG-------------TTGTTTAGTTAT-------GTTCACAGTTGT i canFam3.chr33 C 0 C 0 a score=634374.000000 s hg38.chr3_KI270935v1_alt 189233 247 + 197351 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGCCTTCTGTGTTCAGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTT---CTACAGTCAGAAGTCCATAAACATGAGCTTGCTC-TGTCCAGGATGTC-GGCACTTTTTTGGACACTT--GTGATCAATTAACCCTTTTAATGTTGATGGTCTAATGGCGGAAGCAGAGCTGACAATGG s panTro4.chr3 199826579 247 + 202329955 CCCTGTTACAGGTAATGCCCGGATCAGAGGCTTTGTACCCAAAGTGACTTCTGTGTCCAGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCAGCGGCTCTGACCTTCCTT---CTACAGTCAGAAGTCCATGAACATGAGCTTGCTC-TGTCCAGGATGTC-GGCACTTTTTTGGACACTT--GTGGTCAATTAACCCTTTTAATGTTGATGGTCTAATGGCGGAAGCAGAGCCAACAATGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840178 247 + 202140232 CCCTGTTACAGGTAATGCCCAGATCAGAGGCTTTGTACCCAAAGTGCCTTCTGTGTTTAGGATCATTTCCTGAACCTG-GAAGCAGAGCTGGTGTGTTCTGATCAGCGGCTCTGACCCTCCTT---CTACAGTCAGAAGTCCGTGAACATGAGCTTGCTC-TGTCCAGGACATC-GTCACTTTTTTGGACACTT--GTGGTCAATTAACTCTTTTAATGTTGATGGTCTAATGGTAGAGGCAAAGCCGACAATGG i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 97974 251 + 111706 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTTTGTGCCCAGCGTGCCTTCTGCGTTTAGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTCCAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCAAAGCCAACAATGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 128836 251 + 192460366 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTTTGTGCCCAGCGTGCCTTCTGCGTTTAGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTCCAGGACGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTATCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCAAAGCCAACAATGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125631 252 - 187378091 CCCTGTTACGGGTAATGCCCGGAGAAGAGGCTCTGTGCCCAGCATGCCTTCTGTGTTTAGGGTCATTTCCTGAACATGAAAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTTCTCCTACAGTCAGAAGCCCAAGAACATGAGCTCGCTC-TGTCCAGGATGTCGGGCACTTTTTTGGATACCT--GTGGCCAATTGTCTCTTTTAATGTTGATGGTCTCATGGTGGAGGCAAAGCCAACAAtgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478064 248 - 91754291 CCCTGTTACAGGTAATGCCGGGAGAAGAGGCTTTGTGCCCAAAGCACCTTCTGTGTTTAGGGTCATTTCCTGAACCTG-AAAGCAGAGCTGGTGTGTTCTGATCGGCGGCTCTGACCCTCCTT---CTACAGTCGGAAGCCCAAGAACATGAGCGCGCTC-TGTCCAGGATGTTGGGCACTTTTTTTGATACCT--GTGGCCAATTGTCTCTTTTAATGTTGATGGTCTCAAGGTGGAGGCAAAGCCAACAATGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987677 251 - 74750902 TCCTGCTACAGGTAACGCCCAGATGAGAGGCTTTGTACCCAAAGTGCCCTCTGTGTTTACGCTCATTTCCTGGACGTG-GAAGCAGGGCAGCTGTGTTCTGATCGGCGGCTCTGACCCTCCTTATCCTACAGTCGGAAGTCCATGAACGTGAGCTCGCTC-TGTCCAGGATGTTGGGCACTTTTTTGGACACTT--GTGGTCAATTAACTCTTTTAATGTTGATGGTCTAATGGTGGAGGCAAAGCCCACAACAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65478036 223 - 98207768 GGTTGTTACAAGGCATGTAGAGATAACAGTTTCGGTACCCACAGCCCCTCCTGT----------ATTTTCTCAAGCTA-GACCCAGTCCTGGATCGCTTTGCTCCACAGG----------------TTATAGCAGGAAGTT----GACAGGGACTAGCTT-ATTACAGGATATAAAATGTTTTCTTGGACATTTAGGGGGTCCATTAGATCTGTTAATGTTGACAACCTAATGGGAGAGGCACAGCCGAGAGCAG i mm10.chr16 I 2 C 0 s canFam3.chr33 29117585 241 + 31377067 CCTTATTACGAGTAATGTAGAATTGAGAGTCT-TGTGCCTAAAGCTCCTTGCATATCTAAGCTCTTT-----GGATTA-GGGTCAGGCTTTGTGTGTTTTTGTACACTGCTCTGACCTTCCTT---CTAGAGCAGGAAGTCAATGAACACGAATTAGCTTGTCTACAGGATGTGGGGTGCATTCTTGAACACTT--GGGGCCCATTGAGTCT-CTAATGCTGACAGACTGATGGTAGAGGTGAAACCAACAGAA- i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120948614 319 + 123690457 M a score=890.000000 s hg38.chr3_KI270935v1_alt 189480 1 + 197351 g s panTro4.chr3 199826826 1 + 202329955 g i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840425 1 + 202140232 a i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 98225 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129087 1 + 192460366 A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125883 1 - 187378091 a i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478312 1 - 91754291 A i chlSab2.chr15 C 0 C 0 s mm10.chr16 65478259 1 - 98207768 G i mm10.chr16 C 0 I 14 s canFam3.chr33 29117826 1 + 31377067 G i canFam3.chr33 C 0 C 0 e calJac3.chr17 987928 0 - 74750902 C e nomLeu3.chr11 120948614 319 + 123690457 M a score=163596.000000 s hg38.chr3_KI270935v1_alt 189481 93 + 197351 gccgggcgc---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcgggagttcaagaccagc--ctgac--- s panTro4.chr3 199826827 93 + 202329955 gccaggcgc---tgtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcgggagttcaagaccagc--ctgac--- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840426 93 + 202140232 gccgggtgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaggagttcaagaccagc--ctgac--- i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 98226 93 + 111706 gccgggcac---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaagcaggaggatcacctgaggtcgggggttcaagaccagc--ctgac--- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129088 93 + 192460366 gccgggcat---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaagcaggaggatcacctgagatcgggagttcaagaccagc--ctgac--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125884 93 - 187378091 gctgggcgc---agtggctca---------tgcctgtaatcccagcactttgggaggccgaggtgggaggatcacctgaggtcgggagttcaagaccagc--ctggc--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478313 93 - 91754291 gccgggtgc---ggtggctca---------cgcctgtaatcccagcactttgggaggccgaggtgggaggatcacctgaggtcgggagttcaagaccagc--ctgac--- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29117827 92 + 31377067 GAgggacacttgggtggctcagtggatgagcgtctgc----------ctttg---gcccagggcgtgat-----cctggagacccaggatcgagtcccacatctggctcc i canFam3.chr33 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I e calJac3.chr17 987928 0 - 74750902 C e nomLeu3.chr11 120948614 319 + 123690457 M a score=450131.000000 s hg38.chr3_KI270935v1_alt 189574 209 + 197351 aaacatggagaaaccccatctctactaaaaat--acaaacttagtagaaatgttggtggtgtgcacctgtagtcccagctacctgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagcgaaactccgtcttgaaataataaaataaaata s panTro4.chr3 199826920 209 + 202329955 aaacatggagaaaccccatctctactaaaaat--acaaacttagtagaaatgttggtggtgggcacctgtagtcccagctacttgggaggctgagggaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcataccactgcactccagtctgggcaacaagagcgaaactccgtcttgaaaaaataaaataaaata i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840519 209 + 202140232 aaacatggagaaaccccatctctactaaaaat--acaaacttagtagaaatgttggtggtgtgcacctgtagtcccagctacttgggaggctgagggaggagaatcgcttgaacctgggaggcagaagttgcagtgagctgagatcacaccactgcactccagcctgggcaacaagagtgaaactccgtctcaaaaaaataaaacaaaata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120948935 211 + 123690457 Aaacatggagaaaccccatctctactaaaaataaaaaaatttagtagaaatggtggtggtgtgcacctgtagtcccagctacttgggaggctgagggaggagaatcgcttgaacctgggaggcggaggttgcggtgagccgagatcgcaccactgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaataaaataaaata i nomLeu3.chr11 M 319 C 0 s rheMac3.chrUn_JH291127 98319 206 + 111706 caacatggagaaaccccgtctctactaaaaat--acaaacttagtagaaa---tcgtggcaggcgcttgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcctgcgcaacaagagagaaactccatcttaaaaaaataaaataaaata i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129181 206 + 192460366 caacatggagaaaccccgtctctactaaaaat--acaaacttagtagaaa---ttgtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaactcgggaggcagaggttgtagtgagctgagatcacgctactgcactccagcctgcgcaacaagagagaaactccatcttaaaaaaataaaataaaata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 125977 206 - 187378091 caacatggagaaaccccgtctctactaaaaat--acaaacttagtagaaa---tggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagatcacgctactgcactccagcctgagcaacaagagagaaactccatcttaaaaaaataaaataaaata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478406 206 - 91754291 caacatggagaaaccccgtctctactaaaaat--acaaacttagtagaaa---tggtggtgggcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacttgggaggcagaggtagtagtgagctgagatcacgctactgcactccagcctgcgcaacaagagagaaactccatcttaaaaaaataaaataaaata i chlSab2.chr15 C 0 C 0 s canFam3.chr33 29117919 90 + 31377067 ctgcatggag----cctgcttctccc-----t------------------------------ctgcctgt-gtctctgcctct------------------------------------------------------------------------cactc----atgaataaataaataaaatct-----ttaaaaaaaaAAAAAAAAAGA i canFam3.chr33 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I e calJac3.chr17 987928 0 - 74750902 C a score=162723.000000 s hg38.chr3_KI270935v1_alt 189783 47 + 197351 ----aataga-----ataaTTACTCCGGAAGCCTAAAAATGATGGGTGGATTAAAG s panTro4.chr3 199827129 47 + 202329955 ----aaTAGG-----ATAATTACTCCGGAAGCCTAAAAATGATGGGTGGATTAAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840728 47 + 202140232 ----aataga-----ataaTTACTCAGGAAGCCTAAAAATGATGGGTGGATTAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120949146 47 + 123690457 ----aataga-----ataaTTACTCAGGAAGCCTAAAAATGATGGGTGGATTAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98525 47 + 111706 ----aataga-----ataaCTACTCAGGAGGCCTAAAAATGACAGGTGGATTAAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129387 47 + 192460366 ----aataga-----ataaCTACTCAGGAGGCCTAAAAATGACAGGTGGATTAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 126183 47 - 187378091 ----aataga-----ataattacTCAGGAGGCCTAAAAATGACAGGTGGATTAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478612 47 - 91754291 ----aataga-----ataaTTACTCAGGAGGCCTAAAAATGACAGGTGGATTAAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987928 47 - 74750902 ----AACAGA-----ATAATTACTCAGGTGGCCTAAAAATGAGGGGTGGATTAAGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29118009 56 + 31377067 AACCAACAGAAGGAGATAATGACTCAGGTGAGCTAAAAATGATGGGTGGATTAAGG i canFam3.chr33 C 0 C 0 e mm10.chr16 65478260 14 - 98207768 I a score=79125.000000 s hg38.chr3_KI270935v1_alt 189830 22 + 197351 ACTCTGCAGGTGGGTGGGGAAA- s panTro4.chr3 199827176 22 + 202329955 ACTCTGCAGGTGGGTGGGGAAA- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840775 21 + 202140232 ACTCTGCAGGT-GGTTGGGAAA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120949193 22 + 123690457 ACTCTGCAGGTGGGTGGGGAAA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98572 22 + 111706 ACTCTGCAGGTGGGTGGGGAAA- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129434 22 + 192460366 ACTCTGCAGGTGGGTGGGGAAA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 126230 22 - 187378091 ACTCTGCAGGTGGGTGGGGAAA- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478659 22 - 91754291 ACTCTGCAGGTGGGTGGGGAAA- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 987975 22 - 74750902 ATCCTGCAGGTGGGTGGGAAAA- i calJac3.chr17 C 0 I 493 s mm10.chr16 65478274 22 - 98207768 ACTTTGCACGGGGTTAGCAAGA- i mm10.chr16 I 14 I 1 s canFam3.chr33 29118065 21 + 31377067 --ACTGCAGGTGGGTTGAGGAAC i canFam3.chr33 C 0 C 0 a score=1670961.000000 s hg38.chr3_KI270935v1_alt 189852 689 + 197351 AGGTGGAGAACCCCTTCCCATCCCAGCTCTTTCCTGGGTGAGCTCCCAGCTATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT--ATGCTTAGCCCA-GCGACTGTCCTGAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA----------------AGAAGGCAGTGAGATTAGCCC---------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTGCTCCCTGGGGAGAGGAGGCACCAGCTGAAGC--TGGCCAGGG----GACAGAAGAGGGG--------------TCTGGTGAGCTCTGCTCCCCGGTGTGCA--GGGGAGGCAGAATGCAGGCAGAGGAGCAGCCTGACAATGCGACGGACACATTACCACGTGGCCCTATGTGCC------------------------------------------------------CTCACGGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCA-TTTA-------GCAACA--------GGGTCTGTGGCCCTGG-GC-ATGACTGTGTGCCAGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCTCTGCCTTAGTGCTc-----------------------acaaactcggtggcttcaaacaaacaggaatttattctttcacagtt-tggaacccagaa-gtccaaaatcaaggcgtgggcagaaccacactccctccggaggttctggggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccgggctg s panTro4.chr3 199827198 700 + 202329955 AGGTGGAGACCCCCTTCCCATCCCAGCTCTCTCCTGGGTGAGCTCCCAGCCATGATCCAGGACCAACTGCCAGGCTTCTCATTTTGATACTGGACACT--ATGCTTAGCCTA-GTGACTATCCTAAAGAAAGTGATCCAGACAAAATTTGAA-----CAGAGAA----------------AGAAGGCAGTGAGATTAGTCC---------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTGTTCCCCTTGCTCCCTGGGGAGAGGAGCCACCAGCTGAAGC--TGGCCAGGG----GACAGAAGAGGGG--------------TCTGGTGAGCTCTGCTCCCCGGTGTGCA--GGGGAGACAGAATGCAGGCAGAGGAGCAGCCTGGCAATGCGACTGACACATTACCACGTGGCCCTGTGTGCCGGGC-------------------------------------------CCACACGCTCACAGGGTCACGAGCTAGTGGAATCTAAACATGGAGAGAGGATCA-TTTA-------GCAACA--------GGGTCTGTGGCCCTGG-GC-ATGACTGTGTGCCGGGCAACAGACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCTCTGCCTTAGTGCTc-----------------------acaaacttggtggcttcaaacaaacaggaatttattcttttacagtt-tggaacccagga-gtccaaaatcaaggcgtgggcaaaaccacactctctccagaggttcttaggtggagccctcctggcctctctcctggtttccaggggtggctggccattctccgcattcccaggctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199840796 701 + 202140232 AGGTGGAGACCCCCTCCCCATCCCAGCTCTTTCCTGGGTGAGCTCCCAGCCACGATCCAGGACCAACTGCCAGGCCTCTCATTTTGATACTGGACACT--ATGCTTAGCCCAGGTGACTATCCTGAAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA----------------AAAAGGGAGTGAGATTAGCCC---------ATCAGGCTGGAAAGTGAGACTTGTTCC-TTAGTCCCCTTGCTCCCTGGGGAGAGGAGCCACCAGCTGAAGC--TGGCCAGGG----GACAGAAGAGGGG--------------TCTGATGAGCTCTGCTCCCCAGTGTGCA--CGGGCGGCAGAATGCAGGCAGAGGAGCAGCCCGGCAATG-GACAGCCACATTCTCACGTGGTCCTGTGTGCCGGGC-------------------------------------------CCACACCCTCACGGGGTCACGAGCTAGTGGAATCTACACATGGAAGGAGGAGCATTTTA-------GCAACA--------GGGTCTGTGGCCCTGG-GC-ATGACTGTGTGCCGGGCAACAGACAAGAATCAGTGAGGGCCATCCAGGAAGGCCTCTGCCTTAGTGTTc-----------------------acaaacttggtggcttcaaacaaacaggaatttattcttttacagtt-tggaacccagaa-gtccaaaatcaaggcatgggcagaaccacactccctccggaggttctggggtggagccgtcctggcctcgctcctggttttcaggggtggctggccattctccacattcccgggctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120949215 695 + 123690457 AGGTGGAGA-CCCCTCCCCATCCCAGCTCTTTCTTCGGTGAGCTCCCAGCCATGATCCAGGACCAACTGCCAGGCCTCTCATTTTGATACTGGAAACT--ATGCTTAGCCCAGGTGACTATCCTAAAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA----------------AAAAGGGAGGGAGATTAGCCC---------ATCAGGCTGGAAAGTGAGACTTGCTCCTTTGTTCCCCTTGCTCCCTGGTGAGAGGAGCCACCAGCTGAAGC--TGGCCAGGG----GACAGAAGAGGGG--------------TCTGGTGAGCTCTGCTCCCCCGTGTGCA--GGAGAGACAGAATGCAGGGAGAGGGGCAGCCTGGCAATGCGACGGCCGCATTACCACGTGGCCCTGTGTGCTGGGC-------------------------------------------CCACGCCCTCATGGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCA-TTTA-------GCAACA--------GGGTCTGTGGCCCTGG-GC-ATGACTGCATGCTGGGCA----ACAAGCCTCAGTGAGGGCCATCCAGGAAGGCCTCAGCCTTAGTGTTc-----------------------acaaacttggtgacttcaaacaaacaggaatttattctttcacagtt-tggaacccagaa-gtccaaaatcaaggcgtgggcagaaccacactccctccgggggttct--ggtggagcccccctggcctctctcctggtttccaggggcggctggccgctctccacattcccgggctg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98594 672 + 111706 AGGTGGAGGCCCCCTCCCCATCCCAGCTTGTTCCCGGGTGAGCTCCCAGCCATGAAATAGGACCAATTGTCAGCCCTCTCATTTTTATCCTAGAAACT---------------GTGACTATCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA----------------AAAAGGGAGTGAGATTAGCCC---------ATCAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTGCTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGGCCAGGG----GACAGAAGAGGAG--------------GCTGGTGAGCCC------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGTCTGGCAACGTGACGGCCACATTACCACGGGGCCCTGTGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCA-TTTA-------GCAACA--------GGGTCTGTGGTCCCGG-GC-ATGGGTGTGTGCTGGGCAACAGGCGAGCCTCAGTGAGGGCCACCCAGGAAGGCCTCCGTCTTAGTGTcc-----------------------acaaacttggcagcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaa-gtccaaaatcaaggcatgggcagaaccacactctgtccggaggttctggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcgttcccgggctg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 129456 672 + 192460366 AGGTGGAGGCCCCCTCCCCATCCCAGCTTGTTCCTGGGTGAGCTCCCAGCCATGAAACAGGACCAATTGTCAGCCCTCTCATTTTTATACTAGAAACT---------------GTGACTATCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA----------------AAAAGGGAGTGAGATTAGCCC---------ATCAGGCTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTGCTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGGCCAGGG----GACAGAAGAGGAG--------------GCTGGTGAGCCC------------------GGGGAGGCAGCATGCAGGCAGAGGGGCAGTCTGGCAACGTGACGGCCACATTACCACGGGGCCCTGTGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCA-TTTA-------GCAACA--------GGGTCTGTGGTCCCGG-GC-ATGGGTGTGTGCTGGGCAACAGGCGAGCCTCAGTGAGGGCCACCCGGGAAGGCCTCCGTCTTAGTGTcc-----------------------acaaacttggcagcttcaaacaaaccggaatttattctttcacagtt-tggaaccgagaa-gtccaaaatcaaggcatgggcagaaccacactccgtccggaggttctggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccgcattcccgggctg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 126252 672 - 187378091 AGGTGGAGGCCCCCTCCCCATCCCAGCTCGTTCCTGGGTGAGCTCCCAGCCATGAAACAGGACCAGTTGTCAGGCCTCTCATTTTGATACTAGAAACC---------------GTGACTATCCTACAGAAAGTGATCCAGAcaatatttgaa-----aagagaa----------------aaaagggagtGAGATTAGCCC---------ATCAGGTTGGAAAGTGAGACTTGCTCC-TTGTTCCCCTTGCTCCCTGGCGAGAGGAGTCACCAGCTGAAGC--TGGCCAGGG----GACAGAAGAGGAG--------------GCTGGTGAGCCC------------------GGGGAGGCAGCATGCAGGCAGAGGGTCAGTCTGGCGATGTGACGGCCACATTACCATGGGGCCCTGTGTGCCGGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGTGGAATCTAGACATGGAGGGAGGAGCA-TTTA-------GCAACA--------GGGTCTGTGGTCCCGG-GC-ATGGGTGTGTGCTGGGCAACAGGCAAGCCTCAGTGAGGGCCATCCAGGAAGGCCTCTGTCTTAGTgtcc-----------------------acaaacttggtggcttcaaACAAACCggaatttattctttcacagtt-tgGAACcgagaa-gtccaaaatcaaggcatggGCAGAACCACACTCCACGCGGAGGTTCCGGGGTGGAGTCGTCCTGGCCTGTCTCCTGGTTTCCAGGGGTGCCTGGCCATGCTCCGCATTCCCGGGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 478681 671 - 91754291 AGGCGGAGGCCCCCTCCCCATCCCAGCTCGTTCCTGGGTGAGTTCCCAGCCATGAAACAGGACCAATTGTCAGGCCTCTCATTTTGATACTAGAAGCT---------------GTGACTATCCTACAGAAAGTGATCCAGACAAAATTTGAA-----AAGAGAA----------------AAAAGGGAGTGAGATTAGCCC---------ATCGGGCTGGAAAGCGAGACTTGCTCC-TTGTTCCCCTTGCTCCCTGGTGAGGGGAGTCACCAGCTGAAGC--CGGCCAGGG----GACAGAGGAGGAG--------------GCTGGTGAGCCC------------------GGGAAGGCAGCATGCAGGCAGAGGGGCAGTGTGGCGATGTGACGGCCACATTACCACGGGGCCCTGTGTGCCAGGC-------------------------------------------CCATGCCCTCACAGGGTCACGAGCTAGCGGAATCTAGACATGGAGGGAGGAGCA-TTTA-------GCAACA--------GGGTCTGTGGTCCCGG-GC-ATGGGTGTGTGCTGGGCAACTGGCAAGCCTCAGTGAGGGCCACCCAGAAAGGCCTCTGCCTTAGTGTcc-----------------------acacacttggtggcttcaaacaaagcggaatttattctttcacagtt-tggaacccagaa-gtccaagatcaaggcacgggcagaaccacactccgtccgg-ggttctggggtggagccgtcctggcctgtctcctggtttccaggggtggctggccatgctccacattccggggctg i chlSab2.chr15 C 0 C 0 s mm10.chr16 65478297 659 - 98207768 AGGTGGAG--------TCCACCAAGAGTCCTTCCTGGGTGAACTTTCAGCCATAATGCATGACCAAATACCAGGCATCTCGACTGAATACCTTAGCCTCGATCCTTAGTCAG-GTGAAGATTCTAGAGAAAATGATGCAAAAGTAATCTGAA-----GAGGGAACAAGGAGACATAGAGCAGAAGGCAATGGAAGTGGTCT---------GACA-GCTAGGGAGTGAGGCTTGCTCT-TC----------CTCCACACAGAGA-GACAGACTGGCTGACCCAGAGGCCAAAGCGACAGCAGAAGCAGAG--------------TCAGGGGGTCTT------AGCAAGTACA--TTAGAAGCAGAACTTAGACAGAGG-TCAGCCTGGCAACCCAACAGCCG-GTAACTGCCCAGCCCCAGGTCCCAGGCACCATGTCTAGTGCAGAGACTGATGAAAGGGACAAGAAGAAGACCTTGCATTGCCAGGGTCACTGTCTAGGGGAAGCTAGGAAAGAAGGGAGGGACA-TGTATGGAGAGGCCTCT--------GGGTCTGTGACTTTAATGA-GTGCTTGTTTGCTGAGCA-TGGAGGAAGATCAATAAAGGTGGGTCA--AAGGCCTCTGTATGAGCTTCCC----------------CGTGTAacagatttggcagcttcaagc-cacagaaagctgttctctcacagtt-aggggaacataaggtcaaaaatcagggtg-------------------------------------------------------------------------------------------tcccaggcc- i mm10.chr16 I 1 C 0 s canFam3.chr33 29118086 786 + 31377067 AGGTGGAG-------TCCCTTAAGGAGGCCTTCCTGGGTGGGCTCCCAGCCCTGATCCATGACCAACTGCCACACTTCTCATTTGAATATCTGAGGTTTGATACATAGCCCAGGAGGCGATTCTAGGGAAAGTGATTCAGAAGGAATTGGAATTAGCCAGGGGG---------TCAAAGCAAAAGAAAATGGAAATGGTCCAGAGACACAATCTAGCTG---AGCGAGGTCCGTGCT-CT-------------CCTAGGGCAATGAACTACGTAACACGGA--AGGCCACGC----GGAGCAAGAGGAGCAGAACCAGGGAGCCCCAGCAAGCCCTGCTCCCCAGCATACAATGGAGCAACAGAACCCGGACGGAGCACTAGCCTGGCCCtccaacagccgatttaccctgtgagcttgtgtgccgggcactgtgcctggcccaggggatgctgagatgagcaaggccctgcccctgtcctcacacagtcacattctagACGGATCTAGACCTGGGTGGAGGGGCA-TTTG-------GGGGCAGGCCCTCTGGGTCTGTGGCCCTGA-GCTCTGGGGGGGAGTTGGGCAATGGAGGAAGCTCACTGAGGGCCATCGAAGAGGATCTCAgtatcagtgtcctacggctgctgtaacaaagcaccacaaactaggtggcttaaagc-aacacagttgtattctctcacaattctggaggccagaa-gtcctaaatcaaagcgctgatgggaacatcctccctccaaatctctaggggagaatccttctttgcct--cttctagct---ggtggttgctgg-catcctcggtgttccttagcct i canFam3.chr33 C 0 C 0 e calJac3.chr17 987997 493 - 74750902 I a score=1671783.000000 s hg38.chr3_KI270935v1_alt 190541 549 + 197351 gcagccgtgtccctccagcctctg-cctccatcgtgttgtgtggc--catcttct---cccctgtgcgtgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataaggtcaca------ttctgagtgacatgaattttg-ggggacacgtactcaccccagtacaACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGGGTCATGACA-------------ATAGATGAT----------------TCTTGCCGAATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG-ACCAGCTTGACT--ATTCCTCGATCTAACTTCTT-GGATCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCTCAGCTGTA----GCTCATCAGGCCCGTGCTGAGACCACCCCCT----------CCCCTGCCCAGGAGGGC s panTro4.chr3 199827898 549 + 202329955 gcagctgtgtccctccagcctctg-cctccatcgtgttgtgtggc--catcttct---cccctgtgcatgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataaggtcaca------ttctgagtgacatgaattttg-ggggacacgtactcaccccagtacaACCTCCTTGAAGAAAATTTGGGGCAGGGTAGGTGTATGGGTCATGACA-------------ATAGAAGAT----------------TCTTGCCGAATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACATCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGAGTCA-GGAGCCAGGCGGCATGACCAAGGG-ACCAGCTTGACT--GTTCCTCGATCTAACTTCTT-GGGTCATGAGGCCAGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACCCCCT----------CCCCTGCCCAGGAGGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199841497 549 + 202140232 gcagccgtgtccctccagcctctg-cctccatcgtgttgcgtggc--catcttct---cccctgtgtgtgtgtctctgtttcctcttctcataaggacac------cagtcactggattaggctttgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataaggtcatg------ttctgagtgacatgaattttg-ggggacatgcattcaccccaGTACAACCTCCTTGAAGACAATTTGGGGCAGGGTAGGTGTATGGGACATGACA-------------ATAGATGAT----------------TCTTGCCGAATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGCGTCA-GGAGCCAGGCTGCGTGACCAAGGG-ACCAGCTTGACT--ATCCCTCGATCTAACTTCTT-GGGTCACGAGGCCGGGCAGATGGCAGCCCCAGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACCCCCT----------CCCCTGCCCAGGAGGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120949910 548 + 123690457 gcagccgtgtccctccagcctctg-cctccatcgtgctgcgtggc--cgtcgtct---cccccgtgtgtgtgtctctgtttcctcttctcataaggacac------cagtcactggatcaggctctgcctcaattcggcatgacctcagtttaacttaactaataacctc----tgcaaagaccctatttccaaataaggtcacg------ttctgagtgacatgaatttag-ggggacacgtattcaccccaGTACGACCTCCTTGAAGACAATTTGGGACAGGGTAGGTGTATGGGTCATGATA-------------ATGGATGAT----------------TCTTGCCGAATGATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCACGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCGT-GCTCTTGTCAGCACTGAGTCC-AGGGCCAGGCTGCGTGACCAAGCG-ACCAGCTTCACT--ATCCCTTGATCTAACTTCTT-GGGTCATGAGGCCGGGCAGATGGCAGCCCCGGGAGCCCCCAGCTGTA----GCTCATCAGGCCCATGCTGAGACCACCCCCT----------CCCCTGCCCAGGAGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99266 541 + 111706 gcagccgtgtctctgcagcctctg-cctccatcgtgtcgcgaggccgcgtcttct---cccctgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataaggtcaca------ttctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCAGGTGTGTGGGTCATTACA-------------ATAGATTAT----------------TCTTGCCGAATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG-ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGATCACCCCACCCCCCCACCCCCCCCGCCCAGGAGGG- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 130128 537 + 192460366 gcagccgtgtctctgcagcctctg-cctccatcgtgtcgcgaggc--cgtcttct---cccctgtgcgtgtg--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactgggcatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttccaaataaggtcaca------ttctgagtgacatgaattttg-ggggacacgtattcaccccaGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCCGGTGTGTGGGTCATTACA-------------ATAGATTAT----------------TCTTGCCGAATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCCGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG-ATCAGCTTCGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCTCGTCAAGCCCATGTTGAGATCACCCCACCCCCCCA---CCCCCGCCCAGGAGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 126924 529 - 187378091 GCAGCCGtgtctctgcagcctctg-cctccatcgTGTCGCGAGGC--CATCTTCT---CCCCTGTGCGtgtg--tctgttttctcttctcataaggacac------cagtcactggATTAGGCTCTGCCTCAACGGGGCATGACCTCAGTTTAACTTAACTAGTAATCTC----TGCAAAGACcctacttccaaataaggtcacg------ttctgagtgacatgaattttg-ggggacacgtATTCACCCCAGTACAACCTCCCTGAAGAAAATTTGGGGCAGGGCAGGTGTACGGGTCATTACA-------------ATAGATTAT----------------TCTTGCCGAATAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAGATCTCGGCTCTTGTCACCACTGAGTCA-GGAGCCAGGCTGCGTGACTGAGCG-ATCAGCTTCGCT--ATCCCTCGCTCTAACTTcct-gggtcacgagg-----------------tcaggagcccCCAGCTGTA----GCTCGTCAAGCCCATGTTAAGACCACCGcc-----------cccccGCCCAGGAGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 479352 530 - 91754291 gcagccgtgtctgtgcagcctctg-cctccatcgtgttgcgaggc--catcttct---cccctgtgcgtgtc--tctgttttctcttctcataaggacac------cagtcactggattaggctctgcctcaactggggatgacctcagtttaacttaactaataatctc----tgcaaagaccctacttcaaaataaggtcatg------ttctgagtgacatgaattttg-ggggacacatattcaccccagtacaACCTCCCTGAAGAAAATTTGGGGCAGGGTAGGTGTACGGGTCATTACA-------------GTAGATTAT----------------TCTTGCCTAAAAATGACCTATTTGG---GAAGACCAGCAGGTGTGCCCATGTCACCCTGGGCTGGCTCTGGAAATCCCCCAAATCTCGGCTCTTGTCACCACTGAGTCC-GGAGCCAGGCTGCGTGACCGAGCC-ATCAGCTTGGCT--ATCCCTCGCTCTAACTTCCT-GGGTCACGAGG-----------------TCAGGAGCCCCCAGCTGTA----GCGCATCAGGCCCATGTTGAGACCACCCCCT----------CCCCTGCCCAGGAGGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 988490 492 - 74750902 GTGGCCGTCTCC------Cctctg-cctccatcatgttttgtggc--ca---tct---cccctgtgcgagtgtctccgtcttctctt---ataaggatgc------cagtcaccggattaggctctg----------------cctcagtttaactgaactaataacctc-----------------------------ATCATG-------TCTGAGGGACATGAATCTTG-GGGGACAATTATTCACCCCAGCACAACCTCCTTGAAGAAAATTTGGGGAAGGGTAGGTGTATGGGTCATTACA-------------ATAGATGCT----------------TCTTGCCGAATGATGACCCATTTGA---GAAAACCAGCAGGTGTACCCATGTCACCCTGGGCTGGC-CTGGAAATGCCCCAAATCTCTGCTCTCGTCACCACTGAGTCA-GGAGCCAGGCTGTGTGACCAAGGG-ACCAGCTTGACT--ATCCCTCAATCTAACTCCCT-AGGTCATGAAGCCGGGCAGATGGCAGCCTCAGGAGCCCCCAGCTGTG----CCTCATCAGGCCCATGTTAAGACCACTGCT-----------CCCCTGCCTA-GAGGGC i calJac3.chr17 I 493 C 0 s mm10.chr16 65478956 536 - 98207768 -catctttgcccctatagcttttg----------ggacatgcagc--agtccttgatactcctacacttacccctctgatctcttttttcactgtcacatgtcacatggtcactgggccagggtccaccctcatc--------tatcagtctgacataaccaataacatc----ttctaagac---atttccaaataaatccaca------ttctgag--------actcta-ggTGACATTCTGGGAGTCTAGTACAAACCCCTTAAATA-AACTTGGGGAAGAATAAATGTTTGGGTCATTACATGGAAGTTGTGGGAGGGATCATTTGCCTACTACAGTGCTCTAGCTGATTAGTGATCTTACAGGAGTGCATGCCAGCAAGTG-ACTCATTTCATCCTGGGCTGGTCCTGGAAAT------------------------CAAGGAGTCA-CAAGCCAGGCTGGGTACCCAAGAGAAACAGCCAGTTA--ATTCCTAACCAGATTTCCTT-AGGGCTTGAAATCTGGCAGGCAGCTGTTCTGGAA--TTCTAGCCTTACAGGCCTCATCA-GCCCATGCTGAGAGC-CCCCAT----------CCTGTGTCCAAGAGGGC i mm10.chr16 C 0 I 494 s canFam3.chr33 29118872 500 + 31377067 --------------gcagctttcgtcctcc---------catggc--catcttct---cctccaggcatctgtgtctgttcactcttcttataaggacac------gagtcattggagtagagcccatgccaagccagcgtgatctccatttaacacaactgatcatatcttcattcaaagaatctgtctctaggtaaggtcacaacgaggttcttggtgacatggattttgcggggacacttatccaacccaGTATAACCGC--TGAAGAAAGTTTGGGA-AGGGTAAATGTACGAGTCGTTCCA-------------ATAGATGAC----------------CTCCAC----------------AGG---GAGGCCCAGCAGGTGAGC-CACTTCACCCT-GGCTGGC-CTGGAAGT--CCCAAACCCCTGCCTCGGTCACTACTGAGCTATGAAGCCAGTCGGGGTGACCAAAGGAAACGTCTGTACTCGATCCCTTGGTCAAACTTCCCAGGGGTGGGAGGCTGGGCAGGCAGCAGACCCAGGAGCTCCCCACCCTG----TCTCCTTATGTC-----------------------------CCGCTGCCCAGGAGGGC i canFam3.chr33 C 0 C 0 a score=531217.000000 s hg38.chr3_KI270935v1_alt 191090 168 + 197351 -----AGAAA-------AGCAGGG------CCCAGGCAGCAGTGGCCACACCTGCCTCAGT-----GGTTTCAGCCC---------TGCTCTCTCAAAGGTTGAC-----CTGCTATTG----ACTGGAAGGTATCACATTCCCTTGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGGGTAAGGGTGGGAGAGGGGAGAGAGACAGGA s panTro4.chr3 199828447 168 + 202329955 -----AGAAA-------AGCAGGG------CCCAGGCAGCAGTGGCCACACCTGCCTCAGT-----GGTTTCAGCCC---------TACTCTCTCAAAGGTTGAC-----CTGCTATTG----ACTGGAAGGTATCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGAAGGTAAGGAGTAAGGGTGGGAGAGGGGAGAGAGACAGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199842046 161 + 202140232 -----AGAAG-------AGCAGGG------CCCAGGCGGCACTGGCCACACCAGCCTCCAT-----GGTTTCAGCCC---------TGCTCTTTCAAAGGTGGAC-----CTGCTATTG----ACTGGAAGGTATCACATTCCCTCGTTTCCTTCCATAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGAGAGACAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120950458 161 + 123690457 -----AGAAG-------AGCAGGG------CCCAGGCAGCACTGGCCACACCAGCCTCCGT-----GGTTTCAGCCC---------TCCTCTCTCAAAGGTGGAC-----CTGCTATGG----ACTGGAAGGTAGCACATTCCCTCGTTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGAGAGACAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99807 158 + 111706 --------AG-------AGCAGGG------CCCAGGTGGTGCTGGCCACACCTGCCTCCGT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTGTTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTACCCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGAGAGACAGGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 130665 161 + 192460366 -----AGAAG-------AGCAGGG------CCCAGGTGGTGCTGGCCACACCTGCCTCCGT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CTGCTATTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCTGTACCCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGAGAGACAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 127453 161 - 187378091 -----AGAAG-------AGCAGGG------CCCAGGCGGTGCTGGCCACACCTGCCTCCGT-----GATTTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTATTG----ACTGGAAGGTATCACCTTCCCGCATTTCCTTCAGTACCCAGGGAAGA-------GGGtaagggtgggagaggggagagagacagga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 479882 161 - 91754291 -----AGAAG-------AGCAGGG------CCCAGGTGGTGCTGGCCACACCTGCCTCCAC-----GATCTCAGCCC---------TGCTCTCTCAAAGGTGGAC-----CCGCTATTG----ACTGGAAGGTATCACCTTCCCTCATTTCCTTCTGTAACCAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGACAGACCGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 988982 161 - 74750902 -----AGAAG-------ATCAGGT------CCCAGGCGGTGCTGGCCACACCTGCCTCCGT-----GATCTCAGCCC---------TGCACTCTTGAAGGTGAAC-----TTGCTACTG----ACTGGAAGGCGTCACACTCCCTAGTTTCCTTCTGTAAACAGAGAAGA-------GGGTAAGGGTGGGAGAGGGGAGGGAGAGAGGA i calJac3.chr17 C 0 C 0 s mm10.chr16 65479986 169 - 98207768 -----agaaA-------GGCAAGA------CCCTGGAGATACCAGCCATACCAGCCATCCC-----TGCCCCACCCCAAGCCCCAATCTTCTCTCAAAGGTGAAC-----TGGCTACAGTTAAATTCGAATTTAACAAATT--ATAGTTTCCTGCATAACTCC---AAGA-------GAGTAAAGGTGAGAGAGGGTATAGGGACAGGA i mm10.chr16 I 494 I 1891 s canFam3.chr33 29119372 187 + 31377067 TGGAGAGAAGTGGTGGAAACAGGGGGGCGACCCAGCTGGAGCTCACCACACCTGCCCCTGCCCTGAGATTTCAACCC---------CATTCTTTCAAAGGCGGACTTACACTACAGCTG----AGT-GAAGGCCTCGTACTTCCTGGTTTCCTCTTGAATCCCACTAAGA-------GAAC-AGGGTAGGCAGGGGGAGAGGGACAGGA i canFam3.chr33 C 0 C 0 a score=2583626.000000 s hg38.chr3_KI270935v1_alt 191258 904 + 197351 CAGTATATCTAAAAATAAACGTACCCCACCTCA-ACCTCAAGCATTGCACAGAAAGGTGTGTCCGCCTGCTCTTCACCCGCC---TGTGACCCCCGCATTCCCTCCAGG--TGAGCAGGAGCCCGACCTAGACAC--TCTCTTTAGCCTACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACA--CCCCTTGAAACTGCTTCCTCGG-GTGCACCTGGAGTGTTCTCACTCCTCGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGCAAGAGGGTGATGCGTCATAAGCC-----TGCAT----------------------------------GGACATTGTCACTGAAATGAAAGCTCAGCTTCCAGGGTCCGGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCCAGGGGGCGAGCCTTCGGGCAACATCTAGCCTGGCACTCCTGGTTTCGTGCTGGAGGAGCAGGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTGGGTGCT---GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgggc-aagccacttcctagctgagcctcagtctccatgtctgcacagtggggagagtagacgtaattcctaTTAGCTTAGTACGTCGTAGATTCTCAGC-----AAATGTTAG--CGTCCCCACGCCACCGCCCCCC---AGATGTGGGCATGGAAAGAGAAACA---AACTATTTGGAAGGAGAGTCTGGGGTTGTTCTGGGTGGAGGGCCAGGTCATAGACATGATGTGGTGGCAATGCCTGATTCTGGCTGAGGGAATCATTCTGGAATGGTGAGGGGG-T----GGATCTGGCCACAGGGCTCAGGAGACTATTGTCGTCTCAGGGGTCCTCACAAAGTG----------------GCTGGGCCAGGTGAGCTGGTGTT s panTro4.chr3 199828615 904 + 202329955 CAGTATATCTAAAAATAAACGTACCCCACCTCA-ACCTCAAGCATTCCACAGAGAGGTGTGTCCGCCTGCTCTTCACCTGCC---TGTGACCCCCGCATGCCCTCCAGG--TGAGCAGGAACCCGACCTAGATAC--TCTCTTTAGCCTACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACTTCTCACCAAGCCACA--CCCCTTGAAACTGCTTCCTCGG-GTGCACCTGGAGTGTTCTCACTCCTTGG-CCCCAGTTCCCACTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGCAAGAGGGTGATGCGTAATAAGCC-----TGCAT----------------------------------GGACATTGTCACTGAAATGAAATCTCAGCTTCCAGGGTCCGGAGATGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCCAGGGGGCAAACCTTCGGGCAACATCTAGCCTGGCCCTCCTGGTTTCGTGCTGGAGGAGCAGGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTGGGTGCT---GGGGGAAAGAGCAGGAGCTTTGGAgtcactgtgggc-aagccacttcctagctgagcctcagtctccatgtctgcacagtggggagattagacgtaattcctaTTAGCTTAGTACATCGTAGATTCTCAGC-----AAATGTTAG--CGTCCTCACGCCACCGCCCCCC---AGATGTGGGCATGGAAAGAGAAACA---AACTATTTGGAAGGAGAGTCTGGGGTTGTTCTGGGTGGAGGGCCAGGTCATAGACATGATGGGGTGGCAATGCCTGATTCTGGCTGAGGGAATCATTCTGGAATGGTGAGGGGG-T----GGTTCTGGCCACAGGGCTCAGGAGACTATTGTCGTCTCAGGGGTCCTCAGAAACTG----------------GCTGGGCCAGGTGAGCTGGTGTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199842207 896 + 202140232 CAGTATATCTAAAAATAAACGTACCCCACCTCA-ACCTCAAGCATTCCACAGAAAGGTGTGTCCACCTG--CTTCACCCACC---TGTGACCCTCGTGTTCCCTCCAGG--TGAGGAGGAGCCAGACCTGGACAC--TCTCTTCAGCCCACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGGACATCTTACCAAGCCACA--CCCCTTGAAACTGCTTCCTCAG-GTGCACCTGGAGTGTTCTCACTCCTCGG-CCTCAGTTCCCACTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGCAAGAGGGTGATGACTAATAAGCC-----TGCAG----------------------------------GGACATTGTCACTGAAGTGAAAGCTCAGCTTCCAGGGTCCGGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCC-GGGGGTGAGCTTTCAGGCAACATCTAGCCTGGCCCTCCTGGTTTCCCGCTGGAGGAGCAGGGTGAGAGAGGG-GCTACTGTTGAGCTGTAGGAGGCAGAGTGGGTGCT---GGGGGAAA-AGCAGGAGCTTTGGAgtcactgtgggc-aagccacgtcctagctgagcctcagtctccatgtctgcacagtggggagagtagatgtaattcctattagcttagcacatcgtagattctCAGC-----AAATGTTAG--CGTCCCCGCCCCACCGCCCCCC---AAATGTGGGCATGGAAAGAGAAACA-------ATTTGGAAGGAGAATCTGGGGTGGTTCTGGGTGGAGGGCCAGATCACTGACATGATGGCATGGCAAAGCCTGATTCTGGCTGAGGGAATCATTCTGGAAGGGTGAGGGGG-T----GGGTCTGGCCACAGGGCTCAGGAGACTGTTGTCCCTTCAAGGATCCTCGCAGACTG----------------GCTGGGCCAGGTGAGCTGGTGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120950619 883 + 123690457 CAGTATATCTAAAAATAAACGTATCCCACCTCA-ACCTCAAGCATTCCACAGAAAGGTGTGTCCACCTGCTCTTCACCCGCC---TGTGACCCCCGCGTGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACAC--TCTCTTTAGCCCACA-CA-TGCCAGACTCTCCCATTAGAGGAAAAAGGGACTTCTCACCAAGCCACA--GCCCTTGAGACTGCTTCCTCAG-GTGTGCCTGGAGTGTTCTCACTCCTCAG-CCCCAGTTCCCACTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGCAAGAGGGTGATGACTAATAAGCC-----TGCAT----------------------------------GGACATTGTCACTGAAATGAAAGCTCAGCTTCCAGGGTCCAGAGACGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAACTGCCGGGACCTGCCGAGGCCCAGGGGGCGAGCCTTCGGGCAGCATCTAGCCTGGCCCTCCTGGTTTCCCGCTGGAGGAGCAGGG-------------------TGAGCTGTAGGGGGCAGAGCGGGTGCT---GGGGAAAC-AGCAGGagctgtggagtcactgtgggc-gagccacgtcctagctgagcctcagcctccatgtctgcacagtggggagagcagacGGAATTCCTATTAGCTTAGCACAGCGTAGATTCTCAGC-----AAATGTTAG--CGTCCC--CCCCACCGCCCCCC---AAATGTGGGCATGGAAAGAGAAACA---AACTATTTGGAAGGAGAGTCTGGGGTTGTTCTGGGTGGAGGGCCAGATCACAGACATGATGGGGTGGCAATGCCCGATTCTAGCTGAGGGAATCATTCTGGAAGGGTGAGGGGG-T----GGGTCTGGCCACAGGGTTCAGGAGACTGTTGGCCCCTCAAGGGTCCTCGAAAACTG----------------GCTGGGCCAGGTGAGCTGGTGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99965 901 + 111706 C-GTGTATCTAAAAATAAACGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCTGCTTTTCACCCACC---TGCGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTGGCCCACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCA---CCCCTGACACTT-TGCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGCAT----------------------------------GGACATT-TCACTGAAATGAAAGCTCAGCTTCCAGGGCCCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGGGCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCGGGTGCC---AGGGAAAG-AGCAGGAGCTTTGCAgtcactgcgggcgaagccacttcctagctgagccccaggctccacgtctgcacagtcaggagagtagacgtgatTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG--CGTCCCC-TGCCCCTGCCCCCC---GAATGTGGACGTGGGAAGAGAAACA---AACTCTTTAGAAGGAGAGTCTAGGGTTGTTCTGGGTGGAGGGCCCGATCATAGACATGACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGG-T----GGGCATGGCCACAAGGCTCGGGAGGCTATTGTCCCCTCAAGGGTCCTCGCAAACTG----------------GCTGGGTCAGGTGAGCTGGTGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 130826 901 + 192460366 C-GTGTATCTAAAAATAAACGCGCCCCACCTCA-ACCTCAAGCATTCCACAGACAGGGGCGTCCGCCTGCTTTTCACCCACC---TGCGACCCCTGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCCCACA-CA-CGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCA---CCCCTGACACTT-TGCCTCAG-GTGCACCTGGAGTGTTCTCAGTCGTCGG-CCCCAGTTCCCGCTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGCAT----------------------------------GGACATT-TCACTGAAATGAAAGCTCAGCTTCCAGGGCCCGCAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCCAGGGTTCGAGCCTTCGGGCAGCACCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCGGGTGCC---AGGGAAAG-AGCAGGAGCTTTGCAGTCACTGCGGGCGAAGCCACTTCCTAGCTGAGCCCCAGGCTCCACGTCTGCACAGTCAGGAGAGTAGACGTGATTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG--CGTCCCC-TGCCCCTGCCCCCC---GAATGTGGACGTGGGAAGAGAAACA---AACTCTTTAGAAGGAGAGTCTAGGGTTGTTCTGGGTGGAGGGCCCGATCATAGACATGACGGAGTGACAATGCCTGATTCTGGCTGAGGGAATAATTCTGGAAGAGGGAGGGGG-T----GGGCATGGCCACAAGGCTCGGGAGGCTATTGTCCCCTCAAGGGTCCTCGCAAACTG----------------GCTGGGTCAGGTGAGCTGGTGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 127614 901 - 187378091 cagtgtatctaaaaataaatgcGCCCCACCTCA-ACCCCAAGCATTCTACAGACAGGGGCGTCCGCCTGCTTTTCACCCACC---TGTGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCCAGACACCTTCTCTTTAGCCCACA-CA-TACCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTCACCAAGCCCCA----CCCTGACACTG-TGCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCCCGG-CCCCAGTCCCCGCTAACACTTcctggagct----------------------ggaggaggggGTGAGAGGGTGATGACTGAGAAGCC-----TGCAT----------------------------------GGACATT-TCACTGAAATGAAAGCTCAGCTTCCAGGGCCCACAGCCGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCCGGGACCTGGCGAGGCCCAGGATTCGAGCCTTCGGGCAGCATCTAGCCCGGCCCTCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCAGGTGCC---AGGGAAAG-AGCAGGAGCTTTGCAGTCACTGCGGGCGAAGCCACTTCCTAGCTGAGCCCCAGGCTCCACGTCTGCACAGCCGGGAGAGTAGACGTGATTCCTGCGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG--cgtcccc-tgcccctgcccccc---gAATGTGGACGTGGGAAGAGAAACA---AACCCTTTAGAAGGAGAGTCTAGGGTTGCTCTGGGTGGGGGGCCCGATCATAGACATGACGGAGTGACAATGCCTGATTCTGGCTGAGGGAGTAATTCTGGAAGAGGGAGGGGG-T----GGGCATGGCCACAAGGCTCAGGAGGCCATTGTCCCCTGAAAGGTCCTCGCAAACTG----------------GCTGGGTCAGGTGAGCTGGTGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 480043 902 - 91754291 CAGTGTATCTAAAAATAAATGCACCCCACCTCA-ACCTCAAGCATTCCACAGACAGGTGCGTCCGCCTGCTTTTCACCCACC---TGTGACCCCCGCATGCCCTCCAGG--TGAGGAGGAGCCAGACCTAGACACCTTCTCTTTAGCCCACA-CA-TGCCAGACTCTCCCTTTAGAGGAAAAAGGAACTTCTTACCAAGCCCCA---CCTCTGACACTGCTTCCTCAG-GTGCACCTGGAGTGTTCTCAGTCCTCGG--CCCGGTTCCCGCTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGTGAGAGGGTGATGACTGATAAGCC-----TGCAT----------------------------------GGACATT-TCACTGAAATGAAAGCTCAGCTTCCAGGGCCCGGAGCTGGCTTTGGCCCCAAGGTGCCAGGGACAGCATAAGCTGCTGGGACCTGGCGAGGCCCAGGGTTCGAGGCTTCGGGCAGCACCTAGCCCGGCCCCCCTGGTTTCCCGCTGGAGGAGCGGGGTGAGAGAGGG-GCCGCTGCTGAGCTGTAGGAGGCAGAGCGGGTGCC---AGGGAAAG-AGCAGGAGCTTTGCAGTCACTGCGGGCAAAGCCGCTTCCTAGCTGAGCCCCAGGCTCCACGTCTGCACAGTCGGGAGAGTAGACGTGATTCCTGTGAGCTTAGCACATCGCAGGTTCTCAGC-----AAATGTGAG--CGTCCCC-TGCCCCTGCCCCCC---GAATGTGGACGTGGGAAGAGAAACA---AACTCTTTAGAAGGAGAGTCTAGGGTTGTTCTGGGCGGGGGGCCCGATCATAGACCTGACGGAGTGACAATGCCTGATTCTGGCTGAGGGAGTAATTCTGGAAGAGGGAGGAGG-T----GGGTATGGCCACAAGGCTCAGGAGGATATTGTCCCCTCAAGGGTCCTCGCAAACTG----------------GCTGGGTCAGGTGAGCTGGTGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 989143 880 - 74750902 CAGTATATCTAAAAATAACTGTACCCCACCTCG-ACCTCAAGCATTCCACAGACAGGTGTGTCCACCCGCTCCTCACCCGCC---CGTGACCCCCGTGTGCCCTCCAGG--TGGGGAGGAACTAGACCTGGACACTTCTTCTTCAGCCCACACCA-TGCCAGACTCTCCCTTTAG-TGAAAAAGGGACCTCTTCCCAGGCCCCA-CCCCATTGAACCTGCTTCCGCAG-GTGCACCTGGAATGTTCTCAGTCCTCCGCCCCCACTTCTCACTCACACTTCCTGGAGCT----------------------GGAGGAGGGGGCAGGAGGAGGATGATGAATAAGGCTCCATTTCAT----------------------------------GGACATTGTCACTGAAATGAAAGCTCAGCCTCCGAGGTCCGGAGACGGCTTTGCATCCAAGAAGCCAGGGACAGCATAAGCTGCCAGAATCTGGTGAGGCCTAGGAGGCGAGCCTTTGGGCAGCCTCTCGCCTTGTTCCCCTGGTTTCCTGCTGGAGGAGCACGGTGTGAGAGGG-GCTGCAGCTGCGCTGTAGGAGCCAGGGTGGGTGCT---GGGGAAAG-AGCAGGAGCTTTGGAgtcactgtgggg-aagcc-cttcctagctgagcctcagtctccacatctgcacagccgggaGAGGGGATGTCATTCCTATCAGCTTAGTGCATCGTGGGCTCTCAGC-----AAATGTTAGTTCTTCCCT-CCCCACCCTCCGCCCGGGAACGCGGGCATGGGAAGAGAAAGA---AACTATTTGGAAGGAGAGTCTGGGGT---TCTGGATGGAAGGGCAGATCA-----------------------CTGATTCTGG--AAGGGAGACGT--------GGTGAGGGGGTT----GGGCCTGGCCACAGGGCTTAGGAGGCTGCTGTCCCCTCAAGGATCCTCGCAAACTG----------------GCTGGGTCAGGTGAGTTGGTGTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29119559 937 + 31377067 CAGTA----AAAACATAAAGGAACCCTACCCTGTGACCCAGGCATTCCACAGCCAGGCTTGG-AGCCAACTCTCCACCCCCCACACCAGACCCCTCCCTGCTCTCCGGGGTTGGGAAAGA-----ACCTACACGTCTTCCCCTCTGCTCACA-CAGTCCCAGACTCTTCCTTTATAGGAAAAAGTGACTTCTCACTTTGCTCTGTCCCCCTTGAAATGCCTTCTTCCGAATGTGCCTGGAACGTTGTCTCCCCCTAGCCCTCAATTGCCACCCACACTTCCTGGAGCCCCGGAGAGCTGGGGGTCAGATGGGAGAAGGAGGCAAGAGGATTATCATCGCTAAGCC-----TGCGTCCCATGTCCCATGTGGGGGTGCGGTACTGCAAGATGAGGTTGGCTCTGAGGTGAGCATGAAGCTT-CGGGGCCAGGAGGCTGTGTTAGCCGTGAGGTGCCAG--------------GTCAGGG---GAGGGGGCCTGAGGGAGGGGCCACCAG------------CTGGTTCTCC-----TTCCAATGAAGG---GGAATGTGAGGGGGAGCTGCGGCCAAGCCCCAGAAGGCAGAGTGGGTGCTCCAGGGGAAAG-AACAGG-GCTTTGGGgtcaccatgggc-aacctgctttccagttgaacctcagtctccccatctgcacaatgggaatagta---atgatttctaTTAGGTTAACACATAGAAGTTTCTTGACTTTCTCTGTATCAG--TGTTCCC-TCCCCCTGCCCCAC--------CCCCCACAGAAAAAGAGCCAAGGAGTTGTTTAGAGCAAGAGCCTAGG--TCTTTGGGGGGCGGGGTCAGCTCTT-----TGAGGGGATTACAGTA--TAACTGGAGTGGAGTGACTAGCTGGGGAAGGGAAATAGGG-CAGAGAGGCCTGGCTATAGGGCTCAGGAGCCTACTATCCCCACCAGGCTCCTGGTAAACTGGGAGGTGATCTGCTCTGCTAGATCACGTGAACTGATGTT i canFam3.chr33 C 0 I 5 e mm10.chr16 65480155 1891 - 98207768 I a score=36780.000000 s hg38.chr3_KI270935v1_alt 192162 16 + 197351 TCTTATATGCGGGTAA s panTro4.chr3 199829519 16 + 202329955 TCTCATATGCGGGTAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843103 16 + 202140232 TCTCATACACAGGTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951502 16 + 123690457 TCTCATACGCAGGTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100866 16 + 111706 TCTCCTGTGCAGGTAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 131727 16 + 192460366 TCTCCTGTGCAGGTAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 128515 16 - 187378091 TCTCCTGTGCaggtaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 480945 16 - 91754291 TCTCGTGTGCAGGTAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990023 16 - 74750902 TCCCACAGGCAGATGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I a score=2548.000000 s hg38.chr3_KI270935v1_alt 192178 1 + 197351 A s panTro4.chr3 199829535 1 + 202329955 A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843119 1 + 202140232 A i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951518 1 + 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100882 1 + 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 131743 1 + 192460366 A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 128531 1 - 187378091 a i papAnu2.chr2 C 0 N 0 s chlSab2.chr15 480961 1 - 91754291 A i chlSab2.chr15 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C a score=25752.000000 s hg38.chr3_KI270935v1_alt 192179 21 + 197351 GGTGTTGCTCGTATGCAGGTA s panTro4.chr3 199829536 21 + 202329955 GGTATTTCTCCTATGCGGGTA i panTro4.chr3 C 0 T 44 s ponAbe2.chr3 199843120 21 + 202140232 GGTGTTTCTCATACGCGGGTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951519 19 + 123690457 GGTGTTTCTCATA--CGGGTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100883 19 + 111706 GGTGTTTCTCA--TGCAGGta i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 131744 21 + 192460366 GGTGTTTCTCATGTGCAGGTA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 480962 21 - 91754291 GGTGTTTTTCATACACAGGTA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C a score=2730.000000 s hg38.chr3_KI270935v1_alt 192200 2 + 197351 AA s ponAbe2.chr3 199843141 2 + 202140232 AA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951538 2 + 123690457 AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100902 2 + 111706 aa i rheMac3.chrUn_JH291127 C 0 N 0 s macFas5.chr2 131765 2 + 192460366 AA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 480983 2 - 91754291 AA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e panTro4.chr3 199829557 44 + 202329955 T a score=20648.000000 s hg38.chr3_KI270935v1_alt 192202 23 + 197351 GGTGTTTCTCGTATGCGGGTAAA s panTro4.chr3 199829513 23 + 202329955 GGTGTTTCTCATATGCGGGTAAA i panTro4.chr3 T 44 C 0 s ponAbe2.chr3 199843143 23 + 202140232 GGTGTCTCTCATACATGGGTAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951540 21 + 123690457 GGTGTTTCTC--ATGCGGGTAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 131767 21 + 192460366 GGTGTTTCTCA--TGCAGGtaaa i macFas5.chr2 C 0 N 0 s chlSab2.chr15 480985 23 - 91754291 GGTATTCCTCATGTGCAGGTAAA i chlSab2.chr15 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C a score=1200.000000 s hg38.chr3_KI270935v1_alt 192225 2 + 197351 GG s panTro4.chr3 199829536 2 + 202329955 GG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843166 2 + 202140232 GG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951561 2 + 123690457 GG i nomLeu3.chr11 C 0 I 8 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C a score=2006.000000 s hg38.chr3_KI270935v1_alt 192227 10 + 197351 TGTTTCTCGT s panTro4.chr3 199829538 10 + 202329955 TATTTCTCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843168 10 + 202140232 TGTTTCTCAT i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951563 8 + 123690457 I a score=21895.000000 s hg38.chr3_KI270935v1_alt 192237 49 + 197351 ATGCGGGTAAAGGTGTTTCTCGTATGCGGGTAAAGGTGTTTCTCGTATG s panTro4.chr3 199829548 49 + 202329955 ATGCGGGTAAAGGTGATTCTCATATGCGGGTAAAGGTGATTCTCATATG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843178 49 + 202140232 ACGTGGGTAAAGGTGTTTCTCATACGCGGGTAAAGGTGTTTCTCATACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951571 47 + 123690457 ATGCAGGTAAAGGTGTTTCTCATAT--GGGTAAAGGTGTTTCTCATACG i nomLeu3.chr11 I 8 T 55 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C a score=4.000000 s hg38.chr3_KI270935v1_alt 192286 8 + 197351 CGGGTAAA s panTro4.chr3 199829597 8 + 202329955 CGGGTAAA i panTro4.chr3 C 0 T 48 s ponAbe2.chr3 199843227 2 + 202140232 CG------ i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951618 55 + 123690457 T a score=0.000000 s hg38.chr3_KI270935v1_alt 192294 1 + 197351 G e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C e ponAbe2.chr3 199843229 0 + 202140232 C e nomLeu3.chr11 120951618 55 + 123690457 T e panTro4.chr3 199829605 48 + 202329955 T a score=8925.000000 s hg38.chr3_KI270935v1_alt 192295 63 + 197351 TGTTTCTCATGCAGGTAAAGGTGTTTCTCATATGTGGGTAAAGGTGTTTCTGATATGCAGGTG- s ponAbe2.chr3 199843229 48 + 202140232 -------------GGTGAAGGTGTTTCTCATACGTGGGTAAAGGTGTTTCT--CATGCAGGTA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951563 60 + 123690457 TGTTTCTCATGCAGGTAAAGGTGTTTCTCATA--TGGGTAAAGGTGTTTCT--CATACGGGGTA i nomLeu3.chr11 T 55 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C e panTro4.chr3 199829605 48 + 202329955 T a score=8872.000000 s hg38.chr3_KI270935v1_alt 192358 19 + 197351 AAGGTGTTTCTCATATGCG s panTro4.chr3 199829557 19 + 202329955 AAGGTGATTCTCATATGCG i panTro4.chr3 T 48 C 0 s ponAbe2.chr3 199843277 19 + 202140232 AAGGTGTTTCTCACATGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951623 19 + 123690457 AAGGTGTTTCTTATATGCA i nomLeu3.chr11 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C a score=6982.000000 s hg38.chr3_KI270935v1_alt 192377 30 + 197351 GGTAAAGGTG-ATTCTCACATGCGGGTAAAA s panTro4.chr3 199829576 30 + 202329955 GGTAAAGGTG-ATTCTCATATGCGGGTAAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843296 31 + 202140232 GGTAAAGGTGTTTTCTCATATGCGGGTAAAA i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e calJac3.chr17 990039 0 - 74750902 C e chlSab2.chr15 481008 0 - 91754291 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=53377.000000 s hg38.chr3_KI270935v1_alt 192407 79 + 197351 GGTGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGAGAGAAGTC----TGTGAGA s panTro4.chr3 199829606 79 + 202329955 GGTGTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCCCTGTGATTTCGAGATGGGGAGAGAAGTC----TGTGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843327 79 + 202140232 GGTTTTTCATGCAGCAGTT-GGCAAGTTGGTAACTTCTTCAAGCACCGTGATTTCGAGATGGGGAGAGAAATC----TGTGAGA i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 481008 82 - 91754291 GGTGTTTCATGCAGCAGTT-GGCAAGGTGGTAACTTCTTCAAGTACTGTGGTTTCGAGGTGTGGAGAGAAGTC-GTTTGAGAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990039 84 - 74750902 GTTGTTTGATGCAGCAGTTCTGCAAGGGGGTAAGTTCTTCAAGCCCTGTGGTTACCAGATGAGGAGACAAGCCTGTTTGAGACA i calJac3.chr17 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120496 5 + 31377067 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=258832.000000 s hg38.chr3_KI270935v1_alt 192486 325 + 197351 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGTCGCATCAGCCTACTGCCGAGCATAACACACAAGGGCAAAGAAGACGGGGGTCTGGGA--------TTGGA-------GGGCTTCTTA-AAATTCTGACACTAGACCAACTTTCCAAGTTGTTAAAGCCTGCAGACCCCAGATGTAATCTGTCAGTGTGAGAGGAGTTAA-ATGTCAGCTCCAATATCTACATTATAATAATTGATACATATTACCTAATAATCAATATATTGTGATGTTATATCA-TAGCATTTATTACATACAACACAGTTACTATTATATTAGCTTCATCTACATGTGAGATCTGCTTTT s panTro4.chr3 199829685 325 + 202329955 ATGCAGTTTTGAGAAGCAGAAGCAATGAGGTCGAATCAGCCTACTGCCGAGCATAACACACAAGGGCAAAGAAGACGGGGGTCTGGGA--------TTGGA-------GGGCTTCTTA-AAATTCTGACACTAGAGCAACTCTCCAAGTTGTTGAAGCCTGCAGACCCCAGATGTAATCTGTCAGTGTGAGAGGAGTTAA-ATGTCAGCTCCAATATCTACGTTATAATAATTGATACATATTACCTAATAGTCAATATATTGTGATGTTATATCA-TAGCATTTATTACATACAACACAGTTACTATTATATTAGCTTCATCTACATGTGAGATCCGCTTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843406 324 + 202140232 ATGCAGTTTTGAGAAGCAGAAGCATTGAGTTCGAATCAGCCTACTGCCGAGCATAACGCACAAGGGCAAAGAAGACGGGGGTCT-GGA--------TTGGA-------GGGCTTCCTA-AAATTCTGACACTATACCAACTCTCCAAGTTGTTAAAGCCTGCAGAGCCCAGATGTAATCTGACTGTGTGAGAGGAGTTAA-ATGTCAGCTCCAATATCTACATTATAATAATTGATACATATTACCTAAGAATCAATATATTGTGATGTTATATCA-TAGCATTTATTACATATAACACAGTTACTATTATATTAGCTTCATCTAAATATGAGATCTGCTTTT i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 481090 321 - 91754291 ATGCAATTTTGAGAAGCAGAAGCAATGAGGTTGGGTCGGCCTACTGCCGAACATAACACACAAGGGCAAAGAA---GGGGGCCCCGGA--------TCAGA-------GGGCTTCCT--AAGTTCTGACACTAGACCAACCCTCCAAGCTGATAGAGCCTGCAGACCCCAGATGTAATGTGACTGTGTGAGAGGAGTTAA-ATGTCGGCTCCAATATCCACATTATAATAATTGATACATATTACCTAATACTCAATACATTGTGACGTTATATCA-TAGCATTTATTACATACAACATAGTTATTATTATATTAGCTTCATCTAAATGTGAGATCCGCTTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990123 313 - 74750902 ATGCGGTTTTCAGAAG----AATAATGAGGTTGAATCAGCCCACTGCCGGGCGTAACACACCAGGGCAAAGAA-GCAGGGGTCCTGGG--------TTGGA-------GGGCTTTCCACGTATTCCCA-GCTAGACCAGCTCTCCAGGTTGTCAACGCCTGCAGA-CCCGCATGCAAGCTGACTGTGTGAGAAGAGTTCA-ATGTAGGCTCCAATATCCACGTGATAATAA-TGATACACATTACCTAGTGATCAATATATTGTGATGTTATATC---AGCATTTATTACATACAGCACAGTTAC---TATATTAGCCTTATCTAAATGTAAGATTCACTTTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 29120501 315 + 31377067 ATGAGGCTTGGAGACTCAGAACCAGCGGTACCGAATCAATCTGCTAAAAAGCATAACATGCAAAGGCAAGGAAGAGGCATGTCCTGGGCAGATATTTTCGATTCAATCGAGTTTTTTT---ATCCTGACACTAGACCATCTCACAG-------GAAGCCCGCAGACCCTTGATGC--CCTGACTGTGTTGG--GAGTTCAGATGTAGACTCCAATATCT-TATTAGAATAATTAATATGTAGTA-----TAATAAATATTGCAACATGTGATAGAATTAGCATATTTTATATAGA--------ATTATTGCATTAGCCTAATTTGAATGTGAGATTGGTTCTT i canFam3.chr33 I 5 C 0 e mm10.chr16 65480155 1891 - 98207768 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=260143.000000 s hg38.chr3_KI270935v1_alt 192811 364 + 197351 T------AAAAAA-CTTACTTtattttttatagagatagggtcttactttgttgcccaggctggtcttttttttttttttttttt----tttttgagacagagtctcactctgttgcccaggctggagt------gcatgatctctctgcctcccggattcaagcgattctcctgcctcaccctcctgagtagctgggattacaggcgtgcgccaccacgcccaggtaatttttgtatttttagtagaaacggggtttcaccatgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgagccaccacgcct-------------------------------------------------ggccAAGATTCACTTAAAAAAAA s panTro4.chr3 199830010 362 + 202329955 T------AAAAAAACTTACTttattttttatagagatagggtcttactttgttgcccaggctggtcttttttttttttttttttt----tt---gagacagagtctcactctgttgcccaggctggagt------gcatgatctctttgcctcccgggttcaagcgattctcctgcctcaccctcctgagtagctgggattacaggcgtgcgccaccacgcccaggtaatttttgtatttttagtagagacggggtttcaccatgctggccaggctggtctcaagcccctgacctcaagtgatccacccgcctcggcctcccaaaatgctgggattacaggcatgaaccaccacgcct-------------------------------------------------ggccAAGATTCACTTAAAAAAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199843730 354 + 202140232 T------AAAAAA---CAttttattttttatagagatagggtcttactttgttgcccaggctggtctttttttttttttttt------------gagacagagtctcgctctgttgcccgggctggagt------gcatgatcgctctgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcgtgtgccacgacgcccaggtaatttttgtatttttagtagagacggggttttaccgtgctggccaggctggtctcaatcccctgacctcaagtgatccacctgccttggcctccgaaaatgctgggattacaggcgtgagccaccacgcct-------------------------------------------------ggccGAGATTAACTTAAAAAAAA i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 481411 359 - 91754291 T------AAAAAT-CTTAttttagtttttaaagagatagggtctcactttgttgcccaggctGGtcttttttttttttttttttc---------gagacagagtctcgctccgttgcccaggctcgagt------gcatgatctgtccgcctcccgggtccaagcgattctcctgcctcggcctcccgagtagctgggattacaggcatgagtcaccacgcccaggtaatttttgcatttttagtagagatggggtttcaccatgttggccaggctggtctcaagcccctgaccacaagtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccactgcaccc-------------------------------------------------ggccGAGATTCACTTACAAAAAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990436 429 - 74750902 TTTTAAAAAAAAA-AGTAttttatttcttatagagataggatctcactttgttgcccaggctggtttatttatttatttatttttaatttttttggcacagagtcttgctctgttgcccaggctggagtgcagcggcacaatctctctgcctcctgagttcaagcaattctcctgcctcagcctcccgagtacctgaagttacaggcaagtgcctccacacacagctcatttttgcgtttttagtagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccaccttggcctctcaaagtgctgggattacaggtgtgagccactgcgattacagtgtgattacagctgggattacaGGTGTGAATCACAGCTTTTTGAAAGCTGAGATTCGCTTTCAAAAAG i calJac3.chr17 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e canFam3.chr33 29120816 0 + 31377067 C e nomLeu3.chr11 120951642 0 + 123690457 C a score=-1911.000000 s hg38.chr3_KI270935v1_alt 193175 7 + 197351 AAA---ACTG s panTro4.chr3 199830372 6 + 202329955 AAA----CTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199844084 8 + 202140232 AAA--AACTG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 481770 10 - 91754291 AAAAAAACTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990865 4 - 74750902 AAT------G i calJac3.chr17 C 0 C 0 s canFam3.chr33 29120816 7 + 31377067 ---AAAAATG i canFam3.chr33 C 0 C 0 e mm10.chr16 65480155 1891 - 98207768 I e nomLeu3.chr11 120951642 0 + 123690457 C a score=593330.000000 s hg38.chr3_KI270935v1_alt 193182 678 + 197351 CTTTAAAAACATTCATAAGCCGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACACGCAGGAGCAGCCAATCCCCAAAGCCCTGGTCACGTGATGACAATTAGGCCACCTACCCTCCGTTATTCTGGCCCCTCTGCCAAGAGGCAGGCCCTCACCCAACTGACCCTACCAGCGCAGGGGCCTGAGTGCGGCTCTCCAAAGAAACTTGATGTT---------GGCATTCAGCC---ACAAGCCCGGCTCTCAGAGGAACCTGG-TGTGGGAAAGAC-G-CCCCACCTCCAGCCCCTGTGCCGTCAGAGTCAAGATCACTGTACTTTGCATAAAGTATTAGGAA---AAAACCCAAATTCTTGCTCTTTGATTAGAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGCAAGAGGCAAAAC-TAAAA----CTCAG-GTGTTTTTATCC------GTGAGTCTGTGTTTCTGTGTAAGTGATCTATGCATTTAAAAACCAATAACTTACTTTATCCTTCTCAGGACCTGAAGTATGGTCTTTCATCAGATGCCTACAGAGGGT-AGGAAGGCCAGGAAGAGGTGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTAGAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGGAGAGCACAGAGCCCCCAGGGACACGGGAAGAC s panTro4.chr3 199830378 679 + 202329955 CTTTAAAAACATTCATAAGCTGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACACGCAGGAGCAGCCAATCCCCAAAGCCCTGGTCACATGATGACAATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTGCCAAGAGGCAGGCCCTCACCCAACTGACCCTACCAGCGCAGGGGCCTGAGTGCGGCTCTCCAAAGAAACTTGACGTT---------GGCATTCAGCC---ACAGGCCCGGCTCTCAGAGGAACCTGG-TGTGGGAAAGAC-G-CCCCACCCCCAGCCCCTGTGCCGTCAGAGTCAAGATCACTGTACTTTGCATAAAGTATTAGGAA---AAAACCCAAATTCTTGCTCTTTGATTACAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGCAAGAGGCAAAAC-TAAAA----CTCAG-GTGTTTTTATCC------GTGAGTCTGTGTTTCTGTATAAGTGATCTATGCATTTAAAAACCAATAACTTACTTTATCCTTCTCAGGACCTGAAGTATGGTCTTTCATCAGATGCCTACAGAGGGTTAGGAAGGCCAGGAAGAGATGGGGAGGGCAGGAGGGGAGCGCTGAACAAATGTACAGGTTGGATCCAGGCGTGCGGATCAGACCTTGAACTAAGGAGCCATGGAGAGTGCAGAGCCCCCAGGGACACGGGAAGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199844092 677 + 202140232 CTTTAAAAACATTCATAAGCCGTTATTGCCTGGAGAGTCTTTGAATGTGTCACACCCTTTAACACGCACGGGCAGCCAATCCCCACAGCCCTGGTCACATGATGACAATTAGGCCACCTACCTTCAGTTATTCTGGCCCCTCTGCCAAGAGGCAGGCCCTCACCCAACTGACCCTACCAGCACAGGGGCCTGAGTGCGGCTCTCCAAAGAAACTGGATGTT---------GACATTCAGCC---ACAAGCCTGGCTTTCAGAGGAACCTGG-TGTGGGAAAGAC-GCCCCCACCTCCAGCCCCTGTGCCTTCAGAGTCAAGATCACTGTATTTTGCATAAAGTATTAGG-A---AAAACCCAAACTCTTGCTCTTTGATTAGAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGTGAGAGGCAAAAC-TAAAA----CTCAG-GTGTTTTTATCCATATCTGTGAGTCTGTGTTTCTGTATAAGTGATCAATTCATTTAAAAACCAATAACCTACTTTATCCTTCTGAGGACCTGAAGTATGGTCTTTCATCAGATGCCTACAGAGGGTTAGGAAGGCTAGGAGGAGGTGGGGAAGGCAGGAGGGGAGCGCTGAGCAAATGTACAGGTTGGATCCAGGTGTGCGGACCAGACCTTGAACTAA--------GGAGAGCGCAGAGCCCCCAGGGACACGGGAAGAC i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 481780 675 - 91754291 CTTTAAAAACGTTCCTAAGTCGTTACTGCCTGG-GAGTCCCTGAATGTGTCACACCCTTTAACACACGTGGGCAGTCAACCCCCAAAGCCCTGGTCACGTGACGACAATTAGGCCACCCACCCTCCGTTATTCTGGCCCCTGTGCCAAGAGGCAGGCCCTCACCCAACTCCCCCTACCCGCCCGGGCGCCTGAGCGCGGCTCTCCAAAGAAACTGGATGCT---------GACGTTCAGTC---ACAAGCCCAGCTTTCAGAGGAACCTGG-GGTGGG-AAGAC-A-CCGCACCTCCAGCCCCTGTGCCGTCGAAGTCGAGATCACGGTACTTCGCCTAAAGTACTAGGAA---ACAACT--AATTCTTGCTCTTTGATTAGAGTCTC-----CTTTCCCCACCAGCCCTCTGCAGAAGCCAGAGGCAAAAC-TAAAG----CTCAC-GTGTTTCTATGCGTATCTGTGAGTCTGTGTTTCTGTATAAGTGATCAATGCATTTAAAAACCAGTAACTTACTTTATCCTTCTCAGGACCTGAAGTATGGCCTTTCATCAGATGCCTACAGAGGGTGAGGAAGGC-AGGAGGAGGTGCAGAGGGCAGGAGGGGAGCACTGAGCAAATGTACAGGTTGGATCCAGGCGTGCGGACCAGATGTTGAGCCAAGGAGCCACAGAGAGCGCAGAGCCCCCAGGGACTCGAGAAGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 990869 662 - 74750902 CTTTGAAAACATTCATAAGCCATCATTGCCTGGGGAGTC--TGAATGTCTGATGCCCTTTAACACGTATGGGCCACTAACCTCCAAA-CCCCGGTCACGTGACGACAATTAGGCCACCTACCCTCAGTTATTCTGGCCCCTCTGCCAGGAGGCGGG---------------CCCTACCAGCAGAGGCGCCTGAGTGCGGCTCTCCAAAGAAACAGGGTGTT---------GACACTCAGCCT--ATAAACCCAGCTTTCAGAGGAACCTGG-TGTGGGAAAGAC-A-CCGCAC------CCCCTCTGCTGTCACAGTAAAGATCACCGCACTTTGCCTAAAGTATTAGAAACAGGAAACCCAAATTCTCGCTCTTTGATTCAAGCCTCTCCTTCTTTCCCCACCAGCCCTCTGCAGAAGCAGGAGGCAAAACTTAAAA----CTCAC-GTGTTTTTATCTGTAT--GTGAGTCTGTGTTTCTACATAAATGATCAGCGCATTTAAAACACAATGACTGACTTTATCCTTCTCAGGACCTGAGGTACGGTCTTTCAACAGACGCCTACAGAGGGAGAGGAAGGCAAGGAGGAGGTGGGGAGGGCAGGAGGGGAGTGCTGAGCAAATGGACA-GTGGGGTCCAGGCGTGCGGACCAGACCCTGAACTCAGGAACCACGGAGAGCGCAGAGCCCCCAGGGA-ACGGGAAGAT i calJac3.chr17 C 0 C 0 s mm10.chr16 65482046 572 - 98207768 CTTTTAAAAGAT------GCTGTTATTGCTTGAGGTGGCCCTGAATGTCTGATGCTTCTTAACATGTCTGGGCAGTGACACCTCAAGCCCCAGGTTCCCTTGAGGCAATTAAGCCAACTGCCCTAGGTTAACTGGGCCCTCCCGCC---------------TCCCAGGTGACACCTTCA------GGGTCTG---------------TGAAGCCGAATGTCAAATGTCGGGGCTTCTGGCCTGCAAAGGCCTGGCTTTCTGAGAACTCTGGCTGTAGAGAAGAC-A-GTTCACCTCAGGCC---------TCAGAGTAAAGGCCACT-CACTCTGCCTCCAATATT--------AATCCTCAACTTCT-----GTTGAGTA------------------------------TTCAGAA-TGAGAGGTCAGAT-GAAAAGCCCCTCAT-G---TTCTATAC----------------ATTTCTACACATCTG---TATGCA-TTAAAGAACAGCAGC--AATGTGTCTTCCTCAGGGCCTTAAGTCTGTGTTTCTGTCCCACACATA---AAGGTAAGGAAAGCCAGCAGGAAGTGGGGCAGCCAGCTGGGAAGTGCTAAGCACGCTCGCAAGTTCTATTCGGGCTTGGGGCTCAGATCTTGAAC--------CACTGAGGGGACTAGGTTCATAGGCTC-TGGAAAGGC i mm10.chr16 I 1891 I 2 s canFam3.chr33 29120823 557 + 31377067 CTTTCAAAGTTTTCACGA-CTGTTCTTGCCTGGAGAGCCCCTGAACGTACGATTCTCTTTAGCAGGTCTGCA-AGCCAAAGCCCAAGCCCCTGGTCCCTCCGAGGCTATCAAGCCACCCACCCTTGTTAATTT--GTCCCTCTGCCAAGA--------------------------------CAGGTACCCG---------------------------CT---------G---------C---AAGGCCCTGGCTTTCTGAGGACACTGACTATGGGAAAACCTA-CCCCACTGCA--CCCCGGGGCCATCAGAGTAAAGATCCCTGCA-TTTACTTAAAGTATTAAGAACA-TGAACCCAA--CCCTGTTGTTTGGTTTGAACCTC---TTCCTTCTCCGCCAGCCCCACGTAGGAGAAAGAGACAAGAT-TAACA----TTTGCTATGATTTCATTCATCTC-TTGAGTCTGTGTTTCTGTATAAATGGCCGATGCATTAAAGA---AAAGACTCCTTGTACCCTTCTCAGGGCC--GAACATGGCCTTTCATCAGAGGAATACAGGGGGTGAGGAAGGCAAGAAGGAAATGGGGAGAGCAGGCGGGGAGCGCTGGACAAACTTACAGGCCCGCT-CAGGCGTCTG-----------------------------------------CTCAAGGCCACAGG----- i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120951642 0 + 123690457 C a score=24662.000000 s hg38.chr3_KI270935v1_alt 193860 17 + 197351 GGTTGTCCTGGGTAGAT s panTro4.chr3 199831057 17 + 202329955 GGTTGTCCTGGGTAGAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199844769 17 + 202140232 GGTTGTCCTGGGTAGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951642 17 + 123690457 GGTTGTCCTGGGTAGAT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 482455 17 - 91754291 GGTTGTCCTGGGTAGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991531 17 - 74750902 AGTTGTCCTGGGCAGAG i calJac3.chr17 C 0 C 0 s mm10.chr16 65482620 17 - 98207768 TCCCGTCTAGGGTGGAT i mm10.chr16 I 2 I 464 e canFam3.chr33 29121380 0 + 31377067 C a score=287041.000000 s hg38.chr3_KI270935v1_alt 193877 254 + 197351 GGCAGCTCCAGAAGCCCCCAGCTGTGCCTCATCAGGCCCATGCTGAGACTACGGTCTCCTCTGCCCAGGAGGGCCACAGACAAGTGGAGAAAGCAGAAAAGCAGGGCCTGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGTGGACGCAGCCCAGGCCAAGCCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCTTT-----GGCGCT---TGTGCAACCGCC s panTro4.chr3 199831074 254 + 202329955 GGCAGCTCCAGGAGCCCCCAGCTGTGCCTCATCAGGCCCATGCTGAGACTACGGTCTCCTCTGCCCAGGAGGGCCAAAGACAAGTGGAGAAGGCAGAAAAGCAGGGCCTGGGTGGCGCTGGCCTCACCTGCCTCCATGAGGCGGACA-GGAGCCTCGCAGCCGTGGACGCAGCCCAGGCCAAGGCATGCAGGGAGTAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCTTT-----GGCGCT---TGTGCAACCGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199844786 259 + 202140232 GGCAGCTCCAGGAGCCCCCAGCTGTGCCTCATCAGGCCCATGCTGAGACTACCATCTCCTCTGTCCAGGAGGGCCAAAGACAAGCGGAGAAAGCAGAAAAGCAGGGCCCGGGTGGCGCTGGCCTCACCTGCCTCCGTGAGGCGGACA-GGAGCCTCGCAGCTGTGGACTCAGCCCAGGCTAGGGCATGCCGGGAGCAGTAACAAGAATAAATGAAGCCGTGAAGCCAGGGCCCCTTTGGCAGGGCGCT---TGTGCAACTGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120951659 259 + 123690457 GGCAGCTCCAGGAGCCCCCAGCTGTGCCTCATCAGGCCCATGCTGAGACTACCGTCTCCTGTGCCCAGGAGGGCCAAAGACAAGTGGAGAAAACAGAAAAGCAGGGCCTGGGTGGCACCGGCCTCACCTGCCTCCATGAGGCAGACA-GGAGCCTTGCAGCTATGGACTCAGCCCAGGCCAGGGCATGCAGGGAGTAGTGACAAGAATAAATGAAGCTGTGAAGCCAGGGCTCCTTTGGCAGGGCACT---TGTGCAACCGCC i nomLeu3.chr11 C 0 M 1779 s chlSab2.chr15 482472 259 - 91754291 GGCAGCTCCAGGAGCCCCCAGCTGTGCCTCATCAGGCCCATGCCGAGACCACCCTCTCCCCTGCCCAGGAGGGCCAAAGACATGTGGAGAAAACAGAAAAGCAGGGCCCAGGTGGTGCTCGCCACACCTGCCTCCACGAGGCGGGCA-GGAGCCTCGCAGCCATGGACTCAGCCCCGGCCAGGGCATGGAGGGAGCAGTAACAAGAATGAATGAAGCCGTGAAGCCAGGGCCCCTCTGGCAGGGTGCT---TGTGCAACTGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991548 258 - 74750902 GGCAGTCCCAGGAGCCCCCAGCTGTGCTTCATCAGGCCCATGCTGAAACCATCCTCTCCCCAGCCCAGGAGGGCCATAGAAAAGTAGAGAAAGCAGAAACGCAGGGCCCAGATGGCACGGGCCACACCTGCCTCCATGAGGCAGACA-AGAGCCT-ACAGCCATGAACTCAGCCCAGGCCAGGGCATGGAGGGCACAGTAACAAGAATAAATGAAGCTTCGAAACCAGGGCCCCTTTGGCAGGGCGCG---TGTTCCATGAGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29121380 157 + 31377067 ----------GAAGGCC---GCTGTG-------------------------------------------------------------------------GGCAGGGTCCCTGGGGCACAGGACAGGCCT-CCTGATGGGGGCAGACAGGGAGTCGGGGCGCTGGGGAGGCAACTCTGGGGTGCGGGTGAAGGGAGTGCCTGTGGG---------------GAAGCCAGAGCCCTTGT--CAGCGCACTAGGAGTTTAATGT-- i canFam3.chr33 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I a score=50544.000000 s hg38.chr3_KI270935v1_alt 194131 58 + 197351 AACCTGCGTAGTTCTGTGAGCACTGGGACACGTGTT-GGTGCTGACTCATCAAAATCCC s panTro4.chr3 199831328 58 + 202329955 AACCTGCGTAGTTCTGTGAGCACTGGGACACGTGTT-GGTGCTGACTCATCAAAATCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845045 58 + 202140232 AACCTGCATAGTGCTGTGAGCACTGGGACACGTGTT-GGTGTTGACTCATCAAAGTCCC i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 482731 57 - 91754291 AACCTGCGAAGTGCTGTGAGAACT-GGACACGTGTT-GGTGCGGACTCATCAAAATCGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991806 58 - 74750902 CACCTGCATAGCGCTGTGAGCACGGTGACACGTGTT-GGTGCTGACTCACCAGAATTCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 29121537 59 + 31377067 GGCCTGAGTGGCACCATGAGAAATGTGAGGAGTACTGGGGGCTGACTCACCCAAATTCC i canFam3.chr33 C 0 I 21 e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=3115.000000 s hg38.chr3_KI270935v1_alt 194189 4 + 197351 GGGA s panTro4.chr3 199831386 4 + 202329955 GGGA i panTro4.chr3 C 0 I 36 s ponAbe2.chr3 199845103 4 + 202140232 GGGA i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 482788 4 - 91754291 AGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 991864 4 - 74750902 AGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=2432.000000 s hg38.chr3_KI270935v1_alt 194193 5 + 197351 CTGTG s panTro4.chr3 199831426 5 + 202329955 CTGTG i panTro4.chr3 I 36 C 0 s ponAbe2.chr3 199845107 5 + 202140232 CTGTG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 482792 5 - 91754291 CTGTG i chlSab2.chr15 C 0 I 15 s calJac3.chr17 991868 4 - 74750902 -AACG i calJac3.chr17 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=7634.000000 s hg38.chr3_KI270935v1_alt 194198 31 + 197351 TGG--------TTTTGGACAC--TGCTGGAGTCC-------AGGTGCC s panTro4.chr3 199831431 31 + 202329955 TGG--------TTTTGGGCAC--TGCTGGAGCCC-------AGGTGCC i panTro4.chr3 C 0 T 72 s ponAbe2.chr3 199845112 32 + 202140232 CGG-------CTTTTGGGCAC--TGCTGGAGTCC-------AGGAGCT i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 991872 48 - 74750902 TGGCTGCAGTCCTTTGGGAACGTGGCTGGAGTCCTTTGGGAAGGTGGC i calJac3.chr17 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=8982.000000 s hg38.chr3_KI270935v1_alt 194229 29 + 197351 CTGTGTGG------TTTTGGGCACTGCTGGAGTCC s panTro4.chr3 199831390 29 + 202329955 CTGTGTGG------TTTTGGGCACTGCTGGAGTCC i panTro4.chr3 T 72 C 0 s ponAbe2.chr3 199845144 30 + 202140232 CTGTGTGG-----CTTTTGGGCACTGCTGGCGTCC i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 991920 30 - 74750902 -----TGGAGTTCTTTGTGTACATGGCTGGAGTCC i calJac3.chr17 C 0 I 869 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=873.000000 s hg38.chr3_KI270935v1_alt 194258 3 + 197351 AGG s panTro4.chr3 199831419 3 + 202329955 AGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845174 3 + 202140232 AGG i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=391.000000 s hg38.chr3_KI270935v1_alt 194261 4 + 197351 TGCC s panTro4.chr3 199831422 4 + 202329955 TGCC i panTro4.chr3 C 0 T 36 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e ponAbe2.chr3 199845177 0 + 202140232 C e nomLeu3.chr11 120951918 1779 + 123690457 M a score=3474.000000 s hg38.chr3_KI270935v1_alt 194265 36 + 197351 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro4.chr3 199831390 36 + 202329955 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panTro4.chr3 T 36 T 36 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e ponAbe2.chr3 199845177 0 + 202140232 C e nomLeu3.chr11 120951918 1779 + 123690457 M a score=3474.000000 s hg38.chr3_KI270935v1_alt 194301 36 + 197351 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro4.chr3 199831390 36 + 202329955 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC i panTro4.chr3 T 36 T 36 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e ponAbe2.chr3 199845177 0 + 202140232 C e nomLeu3.chr11 120951918 1779 + 123690457 M a score=10178.000000 s hg38.chr3_KI270935v1_alt 194337 108 + 197351 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCC s panTro4.chr3 199831390 108 + 202329955 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCC i panTro4.chr3 T 36 T 108 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e ponAbe2.chr3 199845177 0 + 202140232 C e nomLeu3.chr11 120951918 1779 + 123690457 M a score=28657.000000 s hg38.chr3_KI270935v1_alt 194445 306 + 197351 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGACACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC s panTro4.chr3 199831390 306 + 202329955 CTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGCCCAGGTGCCCTGTGTGGTTTTGGGCACTGCTGGAGTCCAGGTGCCCTGTGTGGTTTTGGGCAC i panTro4.chr3 T 108 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e ponAbe2.chr3 199845177 0 + 202140232 C e nomLeu3.chr11 120951918 1779 + 123690457 M a score=6914.000000 s hg38.chr3_KI270935v1_alt 194751 27 + 197351 TGCTGGAGTCCAGGTGCCCTGTGTGGT s panTro4.chr3 199831696 27 + 202329955 TGCTGGAGTCCAGGTGCCCGGTGTGGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845177 27 + 202140232 TGCTGGAGCCCAGGTGCTCTGTGTGGT i ponAbe2.chr3 C 0 C 0 e mm10.chr16 65482637 464 - 98207768 I e canFam3.chr33 29121596 21 + 31377067 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=3990.000000 s hg38.chr3_KI270935v1_alt 194778 10 + 197351 TTTGGGCACT s panTro4.chr3 199831723 10 + 202329955 TTTGGGCACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845204 10 + 202140232 TTTGGACACT i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 29121617 10 + 31377067 TCCGGGCCCT i canFam3.chr33 I 21 C 0 e mm10.chr16 65482637 464 - 98207768 I e calJac3.chr17 991950 869 - 74750902 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=7906.000000 s hg38.chr3_KI270935v1_alt 194788 17 + 197351 -GCTGGAGTCCAAG-----TGCC s panTro4.chr3 199831733 17 + 202329955 -GCTGGAGTCCAAG-----TGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845214 17 + 202140232 -GCTGGAGTCCAAG-----CTCT i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 992819 17 - 74750902 -GCTGCAGTTCAGG-----TGCT i calJac3.chr17 I 869 C 0 s canFam3.chr33 29121627 23 + 31377067 GCTTGGAATCCAGGACACCTGCC i canFam3.chr33 C 0 I 1 e mm10.chr16 65482637 464 - 98207768 I e chlSab2.chr15 482797 15 - 91754291 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=149011.000000 s hg38.chr3_KI270935v1_alt 194805 201 + 197351 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTCC-AGAAGAGCTTACGG---------------AAGAGCCTGCGGCTTGGG-AGCAGCATCCCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTT------CTCGGGACGGCTGTTTTCTACTTGAAATGGGGGTCCTGGAGTTCAT---GGGGAATGAGAGA s panTro4.chr3 199831750 202 + 202329955 GCTGGGGCTGCCTCGGGGAGGAGGAAAGTTTCC-AGAAGAGCTTACGG---------------AAGAGCCTGCGGCTTGGG-AGCAGCATCCCCCAGCTCGC-GTGCTGGGTGGGAAGTGCCGAGGGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTT------CTCGGGACGGCTGTTTTCTACTTGAAATGGGGGTCCTTGAGTTCAT---GGGGAATGAGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845231 201 + 202140232 GCTGGGGCTGCCTCAGGGAGGAGGGAAGTTTCC-AGAAGAGCATGAGG---------------AAGAGCCTGCCACTTGGG-AGCAGCATCCTCCAGCTCTC-GTGCTGGGTGGGAAGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCATGTTTGGGGATTTT------CTCCGGACGGCTGTTTTCTACTTGAAATGGGGGTCCTCGAGCTCAT---GGGGAATGAGAGA i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 482812 184 - 91754291 GCTGGGGCTGCCTCAGGGAGGAGG--AGTTTCC-AGAAGAGCCTGAGG---------------AAGAGGCTGCAGTTTGGG-AGCAGCATCCCCCAACTCGC-GTGCCGGGTGGGACGTGCCGA-GGGGC--TGTGCAGAGGGCTCTCGTGTTTGGGGATTTT------CTCGGGATGGCTGTTTTC---------------TCCTTGAGTTCAT---GGGGAATGAGAGA i chlSab2.chr15 I 15 C 0 s calJac3.chr17 992836 175 - 74750902 GCTGAGGCGGCCTCGGGAAGGAGGAACGTTTCTGAGAAGAGCTCAGGG------------------------------------------CCCCCATCTTGT-GTGCTGGGTGGGGGCTGTGGA-GGAGC--TGTGCAGA-GGCTCTCGTGTTTGGCGGTTTT------CTGGGGACAGCTGTTTTCTACTTGAAATGGGGGACCTTGAGCTCAT---GGGGAATGAAGGA i calJac3.chr17 C 0 C 0 s canFam3.chr33 29121651 228 + 31377067 GAGGGGGGGAGCCCCAGAAGGTGGAAATTGCAG-AGAAGAATCTGAGGAGCCAACGGGGCTCCAGGGGCCTGCTTTGTAGACAGCAACAGCACCCACCTCACTGTGCTGGG-AGCAGGTGGGGG-GGTGCTTTGTGCAGAGGGCGCTGGGGTCTGCGGGGTTTGTAAGGCTGGGTGTCGCTGTTTCCCACCTGGGATGGAGGACTTGGAATTTGTGGAggggagtgagaga i canFam3.chr33 I 1 I 230 e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=107602.000000 s hg38.chr3_KI270935v1_alt 195006 149 + 197351 GGTGAGCGGGAGCCAGAA--CGGGAAAGTCCTTGTCC-------GGGGGCTTCCGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGC-CCCAGAGATTCCCCTCGGGGTCAGGCCCT--GCCTACCTGCCT----CGGCCTCGCGGTCG s panTro4.chr3 199831952 150 + 202329955 GGTGAGCGGGAGCCAGAA--CGGGAAAGTCCTCGTCC-------GGGGGCTTCTGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGCGCCCAGAGATTCCCCTCGGGGTCAGGCCCT--GCCTGCCGGCCT----CGGCCTCGCGGTCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845432 150 + 202140232 GGTGAGCAGGACCCAGAA--CGGGAAAGTCCTTGTCT-------GGGGGCTTCTGCAGGAGCCCCCTTGGCCCCTGGCCAGACACTTCCAGCTTCCCTCTGGCGCCCAGAGATTCCCCTCGGGGTCAGGCCCT--GCCTGCCGGCCT----CGGCCTCGCTGTCA i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 482996 151 - 91754291 GGTGAGCAGGACCCAGAA--CAGGACCATCCTCACCCCAGAGAGAGAGGCTTCTGCAGGAGCCCCCAGGGCCCTTGACCAGACACTTCCAGCTCCCCCCTGGTGCCCAGAGATTCCCTTCGGGGTCAGGCcct--gcctgc----------cagcctcgctgtcg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993011 123 - 74750902 GGTGAGTGGGAACCAGAA---GGGCAAGTCCTCGTCTCAGGAGAGGGGGCTTCTGCAGCAGCAGCCTTGGCCCTTGGCCAGACACTTCCAGCTTCCC----------------------------CTGGCCCT--GCCTTGC---------CAGCCTCGCTGTCG i calJac3.chr17 C 0 C 0 s canFam3.chr33 29122109 157 + 31377067 ggtgggggagagCCGGAGCGCGTGAAAGTCCTCATCT-GGGGAGGAGGCTTTCTGCAGGAA-------GAGCTTAGGCCAGAGACTTCCAGCTTCGCCCTGGTGCCCGAAGATGCTTCTGGCTTTCAGGCCCTTCGTCTGTGGCTCTGTGCCCACCTCCCACTCA i canFam3.chr33 I 230 C 0 e mm10.chr16 65482637 464 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=669064.000000 s hg38.chr3_KI270935v1_alt 195155 969 + 197351 CCTTCCTGCC--CCTCAGGAAGCCCTGCCAAGGTCCCCT--------------GAAGGCC------CGCATGCTTGCCCGGAGGAGGCCGCTCCTCATGTTGCCCCAGGGACTGC-CCCCAAG---GCTTCCTTCTT----CAGGGAAG-----------------------------AGGCGGCT--------------------------------C------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC-----------CCAGGCAAACCTTCGCTTCCTCTCCTGCCC---TCCTGCCCCGGGTTTTTCCCCAGACAGACCTACGGGTGCCAGTGCCAGTACGGGTGCCAGTGCCCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCCGAACACCATCGTTTCACAGTCCACTTACTGAGCTGAGA----AGACCTCCTCGtatgaagatctgggaa-ggcctgagctttcaccggcctgcaagctcacgggc-gagcctgccatggttgaa-ggacgctggcagaagaccagagaccctggcccagggcagaggactctgtcactcacggcacggcacgttgctcagtgtgaa-----------------cgagcttcctcttca----ctcccgtttcctttgctccccaaaccccacgggggctacgcagaggc----ccagg--tggattctgtgg--cacagctgggtttgcctcaccgccggggatccccgtgcttaggaaacgccggactgtcatgaggggctgcgaagcaaacctgcccaacctt------tccc--gggggtggacgtcgtctttgttacactggacagcgagcaaatctcgcttctgccccagagggagacgctgtccctgcgcgccgagact-ttcactatatacacgtccttgac--gagagtccagagcaaaaggcc-----gtcggcgcatctgctcctgagacttgcagaaacgtggggaaccagt--gaaaaattgtctcc-GACATCCGAGACCCAGAG-----GAAGCCCAGGC-CAACGGGCGCAGGGTGCTGGC-----------TTTTCCGCTGCCTTAGGTTTCAC----------CGCGGGTG------------------CCGTCTAGCCCCGTCCCCCACGTCTCCGT s panTro4.chr3 199832102 955 + 202329955 CCTTCCTGCC--CCTCAGGAAGCCCTGCCCAGGTCCCCT--------------GAAGGCC------CGCACGCTTGCCCGGAGGAGGCCGCTCCTCCCGTTGCCCCAGGGACTGC-CCCCAAG---GCTTCCTTCTT----CAGGGAAG-----------------------------AGGCGGCT--------------------------------C------------TTGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC-----------CCAGGCAAACCTTCGCTTCCTTTCCTGCCC---TCCTGCCCCGGGTTCTTCCCCAGACA---------GTGCCAGTGCCAGTACGGGTGCCAGTGCCCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCTGCACACCATCGTCTCACTGTCCACTTCCTGAGCTGAGA----ACACCTCCTCGtatgaaggtctgggaa-ggcctgagctgtcaccggcctgcaagctcacgggc-gagcctgccatggttgaa-ggacgctggcagaagaccagagaccctggcccagggca-aggactctgtcactcacggcacggcacgttgctcagtgtgaa-----------------cgagcttcctcttca----ctcccgtttcctttgctccccaaaccccacgggggctacgcagaggc----ccagg--tggattctgtgg--cacag-tgggtttgcctcaccgccgaggatccccgtgcttaggaagcgccggtctctcatga---gctgcgaagccaacctgcccagcctt------tccc---ggggtggacgttatcttggttacactggacagcgagcaaatctcgcttctgccccagagggagacactgtccccgagcgccgagact-ttcactatatacacgtccttgat--gagagtccagaacaaaaggcc-----gtcggcacatctgctcctgagacttgcagaaacgtgggaaaccagt--gaaaaattgttccc-gacaTCCGAGACCCAGAG-----GAAACCCAGGC-CAACGGGCGCAGGGTGCTGGCT----------TTTTCCGCTGCCTTAGGTTTCAC----------CGCGGGTG------------------CCGTCTACCCCCGTTCCCCACGTCTCCGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199845582 941 + 202140232 CCTTCCTGCC--TCTCGAGAAGCCCTGCCCAGGTCCCCT--------------GAAGGCC------TGCAAGCTTGCCCGGGGGAGGCCCCTCCTCACATTGCCCCAGGGACTGCTCCCCAAG---GCTTCCTTCTT----CAGGGAAG-----------------------------AGGCGGCT--------------------------------C------------TCGGCCAG------------------------------------------GGAGTTGT---------TGGGGCTGTTTCCAAC-----------CCAGGCAAACCTTCGCTTCCTTTCCTGCCC---TCCTGCC---------TCCCCAGACAGACC------------------TACGGGTGCCAGTGCCCCAGCCTCGCCTCCCCTGCAGCTCCCTCCTGGGCCAGGCGGAACACCATCGCTCCACAGTCCACTTACTGAGCTGAAA----AGACCTCCTCGtatgaagatctgggaa-ggcctgagctttcactggcctgcaagctcacaggc-gagcctgccgtggttgaa-ggacactggcagaagaccagagaccctggcccagggcaaaggactctgtcactcacggctcggcacattgct--gtgtgaa-----------------cgagcttcctcttca----ctcccgtttcctttgctccccaaaccccacaggggctacgcagaggc----ccaag--tggattgtgtgg--cacag-ggggtttgcttcaccaccgaggatccccgcgcttaggaaacgctggtctctcatgagtggctgcgaagcaaacctgcccaacctt------tccc---ggggtagacgttatctttgttacacgggacagcgagcaaatctcccttctgccccagagggaggcactgtccctgtgcgccaagact-ttcactgtatacacatccttgac--aagagtccagaacaaaaggcc-----atcggcgcgtctgctcctgagacttgcagaaatgtgggaaaccagt--gaaaaactgtctcctgacaTCCGAGACCCAGAG-----GAAACCCAGGC-CAACGGGCACAGGGTGCTGGCT----------TTTTCCGCTGCCGTAGGTTTCAC----------CTCGGGTG------------------CCATCTACCCCCGTTCCCCAGGTCTCCAT i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 483147 931 - 91754291 ccttcctgcc--CCTCAGGAAGCCCTGCCCAGGTCCCCT--------------GGAGGCC------TGCACACTC-CCCAGAGCAGGCCCCTCCTCACACTGCCCCAGGGACTCCTCCCCAAG---GCTTCCTTCTT----CAGGGAAG-----------------------------AGGTGGCT--------------------------------C------------TTGGTCAG------------------------------------------GGAGCTGT---------TGGGGCTGTTTCCGAC-----------CCAGGCGAACCTTCGCTTCCTTTCCTGCCC---TCCTGCCCCGGGTTTTTCCGGAGACAGACC------------------TGCAGGTGCCAATGCCCCAGCCTCACCTCCCCCGCAGCTCCCTCCTGGGCCAGGCTGAACGCCGTCGCTCCACAGTCCACTCACTGAGCTGAAA----AGACCTCCTCGTGTGAAGATCT----------------------GGcctgcaagctcacaggc-gagcctgccgtggttgaa-ggccgctggcagcagaccggagaccctcgtccagagcaaaggactctgtcactcacggcacggcacgttgctcagtgggaa-----------------caaacttcctcttca----ctcccgtttcctttgctccccgaactccacaggggctatgcagaggc----ccaag--tggattctgcgg--c-cgg-tgggtttgcctcacctccgagggtccctgtgcttaggaag-gccagtctctcgtgaggggttgtgaagcaaacctgcccaacctt------tccc--gggggcagacgttttctttactatactgaacagcaagcaaatctcccttctgtcccagagggagacatggtccccgtccgccaagact-ttcactatataaacgtccttgacaagagagtccagaacaaaaggcc-----gtcagcgcatgtgctcctgagacttgcagaaatgtgggaaaccggt--gaaaaattgcctcccgacaTCCGGGACCCAGAG-----GAAACCCAGGC-CGATGGGCACAGGTTGCTGGAT----------TTTTCCGCTGCCGTCGGTTTCAC----------CTCAGGTA------------------CCATCTACCTCCGTCCCGCAGGTCTCCGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 993134 869 - 74750902 CCTACCTGCC--CCTCAGGAAG-------------CCCT--------------GGAGGC--------ACCTGCTTGCCCGGAGGAGGCCCTTCCTCACATTGCTCCAGGGATTCCTCCCCGAG---GTTTCCTTCTT----CGGGGAAG-----------------------------AGGAGACT--------------------------------C------------TTGCTGGG------------------------------------------GGAGTTGT---------CAGGGCTGTTTCTAAG-----------CCAGGCAAACCTTGACTTCCTTACCCGCCT---TCCTGCCCTGGGTTTCTCT-CGCACAGACC------------------CATGGGTGCCTGGGGCCCAGCCTCTTCTCCCCCGCAGCTCCCTCCTGGGTCAGCCTGAACACCATCGCTTCAC-GTCC----------------------ACCTCCTGTtatcaagatctgggaa-ggcctgagctttcccccacctgcaggctgtcaagc-gagcctgccacggttgagtggacactggcagaagacaagagaccccgggtcagagccgagggctccaggactcacagcacg---cgctgttcggtgcgaa-----------------tgaacttcctcttca----catcagtgcccttcgctcctcaaaccccac-ggggccacgcagaggcag--ctacg--tggactgaatga--cgtgg-tgggtttgcctcgccga---------------------------ggtctctca---------gcgggg----cctgcccagcctttctttctccc--ggtggtacatgctgtcttcattccatagaacagcaagcagatctc-cttctgccccagagggggacactgacgccgtccgccaagcct-ttcactagataaacatccttgaccagagagtccagatcaaaaggcc-----ggcagcgcatctgctcctgagacttgcagaaatgagggaaaccaat--gaaaacttgtctcccaacaTCCGAG--CCACAG-----CACACCCAGCC-CAGCGGGCGCAGGCTGCTGGC-----------TTTTCCTC----------TTTAC----------CCCAGGTG------------------TAGCC--ACCCCGTGGCCCAGGCCTCCAT i calJac3.chr17 C 0 C 0 s mm10.chr16 65483101 1050 - 98207768 CCTTCTCACCCACCTCAGGAAGCTTGGGCCAGGTCCCCTTTACCACTacacacaaacaca------cacacacacacaca---cacacacacacTCATGATGCCCCAGGGATTCC-CTCTGGG---TCTTCCTTCTCCTTACAGGGAAG-----------------------------AGAAAGTTTGCAATGATGGCCTTTTGTGGTCATCACTCTCC------------TTGGCTGGTCTCCAAAGAGCCTCTGGGTTTGACTGAAGTTTAAGCAATACAGAGTAGT---------TGTGGCACTATGAGACCAGCCTGGTCTCCAGTCAGCCCTTAACTTCCTTACCTA------TTCCACCCTAG---TCTTTACAGAGAACCC------------------CAGAGGTGCCGGGTGTCCAGGCTTGCC-CACTTGCAG-------CTGGAT--------------TTACTTCACTGTCTGACAACTGGCCTGAAAACACAGACCGATGGAtgccaacaaccatgaagggtctgatattatatccactagtgaactaacaagc-tggcctgccacagttttacagatgttagcaaa----caaaaaaccataacaagaacaaag-------ccactcacagca-gaccctgggttagaggcaaagcgatttgttacagccgctaacatcagcttcagggttcattggttcctctgctacttg-----ccctgagacaatacagaggcaggcccaga--tgtgttctatgagccaaag-tgagcttacatcccagc------tacccaggct--aggaacaccaatatcttatctacagctataaaacaaacctgtccaacctt------ttccccagagctaaacgatatctctgtgctgttggacagtaaacagatcagcctcctg-cacaaagggagacactg-ccttgtcttccaatgct-ctcgctgtatgaacattctgg----aagatcccaaaacaaaaggacaaaatgtcaatgcatttgttcttaaaatttgcagaaatgtgattgagttgtagaaaaaaatgtctcccaacaTCCAGGAGCCAGGG-----AAGACCAAGGCTCCATTAGCATGAGCTGTTGGCT----------CTTTCCCTGTCTCTGGCTTTCGTGAGTGGCTCACACAGGTA------------------TCACAGAACCCCTTTCCTCAAGCCACCAT i mm10.chr16 I 464 I 2568 s canFam3.chr33 29122266 913 + 31377067 CCACCCAGCT--CCC---AAAGCTCTGACAAGGCCCCCA--------------GAAAACCTCCAGGTACCTGCTGCTGGGGAGGAGGACAGCCCTCCCGCCGTCCCAGGGGATCCTGCCTCAGCCTGCTTCCCCCCA----CAGCCAGGGCTCCATCTCCGCTCCCCCAGGTGCTCACAGGTGCCT--------------------------------CCGGTGCGCTGCACTGTGCAG------------------------------------------AGGCTTGTTCATCAGGCTGCAGCTTTTTCTATC---------TTCCAGGCA--CCTTAGCTTCCTTACCTGCTCAGGTACTGCC---------------TGCAGCCC------------------CCCAGGTGCCCAGAGCTCCCCTTCGCCTTCCTCTT--CCCCCTCCCAGACTGTCCTGAGCACCG-CGCTTCCCGGGCCATTTACTGAGCTGAAAACACATACCTGCCCGTG------------------------------------------TCACAGACAGGGCCTGCCACAGTGTCACGGGTGCTGGCGGGAGACCTGAGG---------AGAGCTGA--------------ACCTCAGGTCGGGTAGTCGGGTGTCGG------------------------CCGCCTTG---------------------------AGcccccagaggccacacggaggc----gccggcctgggctctgca---cacac-cgtgcttg--tcccaactgagaaaccctaagcttaggaca-gtcggatctttttaagaggctgccagg-aaacctgcccagcgtt------tcct-tggaggtaaacatcctctttatgatacgggacagccagcaaatctg-cttctg------------------tctctgtccctcaaagctgtcccccacccaaacacccttgaaaagatagtctagagcaaaaggcc-----aacggtatttctgctcctgagacttgtaaaaacatgag--actggt--ggaggactgtctcccaacaTCTGAGATccggcggggccgaggcccgggt-ccgcgggcgggggTCGTCACCTGCACCCCGTCAGCTCCGCCCCC------CACGC----------CGTAGGTGGGCCCGGTGACTCCCTCAGCACCACACCCCCCTTCCCGGGtctccgc i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 120951918 1779 + 123690457 M a score=18934.000000 s hg38.chr3_KI270935v1_alt 196124 17 + 197351 GGCCAGCACAGGGCCCG s panTro4.chr3 199833057 17 + 202329955 GGCCAGCACAGGGCCCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199846523 17 + 202140232 GGCCAGCACAATGCCCG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 484078 17 - 91754291 GGCCAGCACACGGCCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994003 17 - 74750902 GGCCAGCACAGTGCCTG i calJac3.chr17 C 0 I 128 s canFam3.chr33 29123179 16 + 31377067 -accagcgcagtgcccg i canFam3.chr33 C 0 N 0 e mm10.chr16 65484151 2568 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=49667.000000 s hg38.chr3_KI270935v1_alt 196141 63 + 197351 AAatgagaccgctcataaataactgaaaaaatcacacttacctcagattgtaccctactatgt s panTro4.chr3 199833074 63 + 202329955 AAatgaaaccactcataaataattgaaaatttcacacttacctcaaattgtaccctactatgt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199846540 63 + 202140232 AAatgaaactgcccataaataattgaaaaattcacacttacctcaaattgtaccctactatgt i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 484095 63 - 91754291 AAatgaaactgctcataaataattgaaaaattcacacttacctcaaattgtaccctgctatgt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994148 63 - 74750902 aaatgaaactgctcataaataattgcaaaattcacactttgctcaaattgtaccccactctgt i calJac3.chr17 I 128 C 0 e mm10.chr16 65484151 2568 - 98207768 I e nomLeu3.chr11 120951918 1779 + 123690457 M a score=60968.000000 s hg38.chr3_KI270935v1_alt 196204 115 + 197351 caatcatgttggaacaaattagcgtttctgaaacaagagttatggcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGATACTGTTC----GGTCCCAACCCCAGGAG s panTro4.chr3 199833137 115 + 202329955 caatcatgttggaacaaattagcgtttctgaaacaagagttacagcagaagtgactgCGATGTTCCGATGTTTCTAGGTGTTGGCACGGATACTGTTC----GGTCGCAACCCCAGGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199846603 115 + 202140232 caatcatgttggaacaaattagcttttctgaaacaagagttatagcagaagtaactgCAATGCTCTGACGTTTATAGGTGTTGGCACAGATACTGTTC----GGTCGTAACCCCAGGAG i ponAbe2.chr3 C 0 C 0 s chlSab2.chr15 484158 71 - 91754291 cagtcatgttgcaacaaattagcgtttctgaaacaagagctagagcagaagtgac-----------------tCTAGCT-------------------------------CACCGGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994211 118 - 74750902 caatcacactggaacaaatgagtgtttctgaaacaagagtcatagcagaagtgcctTCAGTGTTCTGGGGTGTAGCAGTGTTGCCACGTGTACTGTTCACA-GTAATCATCCCCGGGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 65486719 106 - 98207768 cgatcttgctggaacaa------gtttgtgaactgagagctatagctgcactgac-----tgGTCTAATGTTCAAAAGGATTGACTCAG--ACTGCTGCCATCACACTAACCCTGTGAG i mm10.chr16 I 2568 C 0 e nomLeu3.chr11 120951918 1779 + 123690457 M a score=381242.000000 s hg38.chr3_KI270935v1_alt 196319 345 + 197351 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGACTCCCCTCAACAAGGGGCTGTGGCCAAGGAAAGGGGCCCTGAGAGACCTCACACAGAGCCCCCCAGTCG----CATA----CGGCACGGCTGAACTCTCCTGGCTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCAGCCCCCGCCAGCCAGCTCAGGGGCAGACGGCCTAGTGGGGCCCTTGCCCAGCCACCCGCCTATCTATTGGCTAAAAAAATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTTTTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC s panTro4.chr3 199833252 344 + 202329955 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGAC-CCCCTCAATAAGGGGCTGTGGCCAAGGAAAGGGGCCCTGAGAGACCTCACACAGAGCCCACCGGTCG----CATA----CGGCGCGGCTGAACTCTCCTGACTTCCCAGAGAATCCAGAAGGAA--------AGGGCGGCCTCC------------------------------CGCAGCCCCGGCCAGCCAGCTCAGGGGCAGACGGCCTAGTGAGGCCCTTGCCCAGCCACCCGCCTATCTATTGGCTAAAAAAATGTAAAAACAAAAATCACTCTTCCCATACTACTCTTTTTCTCCTTCCCTCTTTTTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199846718 344 + 202140232 GTAGTTACTGGGAGCCATTCTGAGGAGGGAGTGCTGAGGACCCCCCTCAATAAAGGGCTGTGGCCAAGGAAAGGGATCCTGAGAGACCTCACACAGAGTCCACCGTTCA----CATA----CGGTGCGGCTGAACTGTCCTGGCTTCCCAGAGAATCCAGAAGGCA--------AGGGCGGCCTCC------------------------------CACAGCCCCCGCCAGCCAGCTCAGGGGCAGACAGCCTAGTGGGG-CCTTGCCCAGCCACCCACCTATCTATTGGCTAAAAAAGTGTAAAAACAAAAATCACTCTTCCCGTACTACTCTTTTTCTCCTTCCCTCTTTTTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120953697 344 + 123690457 GTAGTTACTGGCAGCCATTCTGAGAAGGGAGTGCTGAGGACCCCCGTCAATAAGGGGCTGTGACCAAGGAAAGGGGCCCTGTGAGACCTCATACAGAGTCCACCGTTCG----CATA----CGGCGCGGCTGAACTCTCCTGGCTTCCCAGAGATTCCAGAAGGAA--------AGGAT-GCCTCC------------------------------CACAGCCCCCACCAGCCAGCTCAGGGGCAGACGGCCTAGTGGGGCCCTTGCCCAGCCACCCACCTGTCTATTAGCTAAAAAAGTGTAAACACAGAAATCACCCTTCCTGTACTACTCTTTTTCTCCTTCCCTCTTTTTAAAATCCTGTTTTTGCTTTTGTTCATTGAC---AGCAGCC i nomLeu3.chr11 M 1779 C 0 s chlSab2.chr15 484229 344 - 91754291 GTAGTTCCTGGGAGCCCTTCTGAGGAGGGAGTGCTGAGGACCCCCCTCCATAAGGGGCTGTGGCCAAGGAAA-GAACCCCGAGAGGCCTCACACAGAGTCCACCGTTCG----CACT----CGGCGCAGCTGAACTCTCCAGGCTTCCCAGAGAATCCAGAAGGAA--------AGGGCCACCTCC------------------------------CACAGCCCCAGCCAGCCAGCTCAGGGGCAGACGGCCTAGTGGGGCCCCTGCCCAGCCACCCACCTAACCACTGGCTTTAAAAATGTAAAAACAAAAATCACTCTTTTCGCACTACTCTTTTTCTCCTTCCCTCTTTTTAAAATCTTGTTTTTGCTTTGGTTCACTGAC---AGCAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 994329 310 - 74750902 --AGTTACTGGCAGCCATTCCCAGGAGGGA-TGCTGAGGACCCGCCCCAGTGAGGGGCTGTGGCCGAGGAAAGGGACTCTGAGAGA-----------------------------------CGGCGTGGCTGAGCTCTCCAGGCTTCCCAGAGGATCCAGAAGGAA--------AGCGCTGCCTCC------------------------------CATGGCCCCCGCCAGCCTGCTCA-GGGCACGCTGCCTCATGGGCCCCTTGCCCAGCCGCCCACCTGCCGGCTG---AAGAAAACGTAAAAAGCGAAATTACCCTTCCTGGACTACTCTTTCTCT-CTCCCCTCTTTAAAAAACCCTGTTTTTGCTTTTGTTCACTGAC---AGCTGCC i calJac3.chr17 C 0 C 0 s mm10.chr16 65486825 326 - 98207768 GAAGTTTCTGTGAG--ATTCTAAAGAGCAAGGGGTGGGGACCCACCTATGTGAGG-----------AGGAA-------CTGTGAGA--------AGAACCAACCGTGCAAGTTCATAAACTCTGCATGGCCTAACTTTCAAGGCCTCCCAGAGAATCCGTAAGTAACTAATACTAAGGTGTCCGCCAACCCAAcccaccccgcaccccatccccatccccacccccaccc-ccaccccATAGCCAGCCTGCCTATCAATATACTTGTCCA--------TCAATCAGCTAGTTAG----------------------------CCAAACTGC-CTCTGCGTCTTTCCCTCTTTTTATACTAC--TTCTTGCTTTGGTTCAGTGACCAAAGCAGCC i mm10.chr16 C 0 N 0 a score=249768.000000 s hg38.chr3_KI270935v1_alt 196664 252 + 197351 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttctttttg-tttt--tttgagacggagtctcactcttgtcactgaggctggagtgcagtggtgtgatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacccccagctaattttttgtattttttg-------------tagagacggggtttcaccacgttggccaggatggtct s panTro4.chr3 199833596 251 + 202329955 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttctttttg-tttt--tttgagacggagtctcactc-tgtcactgaggctggagtgcagtggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacccccggctaattttttgtattttttg-------------tagagacggggtttcaccacgttggccaggatggtct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199847062 251 + 202140232 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttctttttg-tttt--tttgagatggagtgtcactc-tgaatcccaggctggagtgcagtggtgtgatctcagctcactgcaacctccgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggcgtgtgccaccacgcccggctaattttttgtatttttag-------------tagagatggggtttcaccatgttgaccagtctggtct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120954041 249 + 123690457 TAAAAAGTGTTCTTCCTCATATATGGGAGTTAAttctttttg-tttt--tttgaaacggagtctcactc-tgtcacccaggctggagtgca-tggtgcgatctcaactcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcatgtgccaccatgcccagccaa-tttttgtattttctg-------------tagagacggggtttcgccatgttggccaggatggtct i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 484573 251 - 91754291 TAGCAAGAGTTCTTCCTCGTATACAAGGGTTAAttctttttgttttt--tttgagacggagtcttgctc-tgttgcccaggctggagtgcagtggcacaatctcagctcactgcaagctccgtctccctggttcacgccattctcctgcctcagcctcctgagtagctggggctacaggtgcccaccaccatgcctggctaa-tttttgtatttttag-------------tagagacggggtttcaccatgttggccagaatgatct i chlSab2.chr15 C 0 N 0 s calJac3.chr17 994639 258 - 74750902 TAAC-AGTGTTCTGTTTCATATATGGAAGCCAAttctttttt-tttttctttgaggtggaatcctgctc-tgttgcccaggcttgagggcagtggcgtgatctccgttcacggaaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgacattataggcacccaccactacccccagctaa-tttctgtatttttaaatttctattttttttgaaacagagtctagctctgttccctaggc------ i calJac3.chr17 C 0 C 0 a score=140599.000000 s hg38.chr3_KI270935v1_alt 196916 246 + 197351 tgaact------cctgatctcaaggctcactgcaacttctgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaggcctgtgccaccacgccaggcc-aatttttgta-ttttcagtagagacggggtttcaccatgttggccaggatggtctcaatctcttgacctca---tgatcctcccacctcggcctcccaaaatgctgggattaca-gcgtgagtcactgtgcccagcct s panTro4.chr3 199833847 246 + 202329955 tgaact------cctgatctcaaggctccctgcaacttccgcctcccgggttcaagggattctcctgcctcagccttctgagtagctgggagtacaggcctgtgccaccatgcccggcc-AAtttttgta-ttttcagtagacacggggtttcaccatgttggccaggatggtctcaatctcttgacctca---tgatcctcccacctcggcctcccaaagtgctgggattaca-gcgtgagtcactgtgcccagcct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199847313 247 + 202140232 tgaact------cctgatctcaaggctcactgcaacctccacctcccaggttcaaggaattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccacgcccggcc-aattttttta-ttttcagtagagacggggtttcaccatgttggccaggctggtctcaatctcttgacctca---gcatcctcccacctcggcctcccaaagtgctgggattacaggcgtgagtcactgtgcccagcct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120954290 216 + 123690457 caatct------cttgacctcatg----------------------------------atcctcccacctcggcctcccaaaatgctgggattacaggcgtgagccaccgcacccagcctattttttgta-tttctggtagagacggagtttcaccgtctggtctggtctggtctgaaacttttgacctcaag-tgatccaccagcgttggcctcccaaaatgctgggattataggcgtgagccaccgcacccggccT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 994897 254 - 74750902 tgaagtgcatggcacaatctca--gctcattgcaacctctgcctccctggttcaagcgattct-cggcctcagcctcctgagtagctgggactacaggcatctgccactacaccccact-aatttttgtattttttagtagagatggggtttcaccattttagtcaggctggtctccaactcctggcctcaggttgatctgtctgcctcggcctccccaagtgctggggttacaggcgtgagccactgcacccggccT i calJac3.chr17 C 0 N 0 a score=726.000000 s hg38.chr3_KI270935v1_alt 197162 2 + 197351 aa s panTro4.chr3 199834093 2 + 202329955 aa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 199847560 2 + 202140232 aa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 120954506 2 + 123690457 GA i nomLeu3.chr11 C 0 N 0 a score=48424.000000 s hg38.chr3_KI270935v1_alt 197164 187 + 197351 tttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCGGTGAAAGTCTGAAGATTCTACATCTACTCCTTCAAATTTACTTCTAGGAATT s panTro4.chr3 199834095 187 + 202329955 tttttgtatttctggtagagatggggtttcaccgtctggtctggtctgaaactcctgacctcaagtgatccaccggcattggcctcccacaatgctgggattacaggcgtgagccaccgtgcccggccTGACGCGGTGAAAGTCTGAAGATTCTACATCTACTCCTTCaaatttacttctaggaatt i panTro4.chr3 C 0 N 0 s ponAbe2.chr3 199847562 187 + 202140232 tttttgtatttctggtagagactgggtttcaccgtctggtctggtctgaaactccagacctcaagtgatccgccagggttggcctcccaaaatgctgggattataggcgtgagccactgcacccggccTGACATGGTGaaagtcttaagattctacatctactccttaaaatttacttctaggaatt i ponAbe2.chr3 C 0 N 0