##maf version=1 scoring=roast.v3.3 a score=563830.000000 s hg38.chr3_KI270937v1_alt 1 318 + 165607 AATTCTTCCCTGAGACTTTGTCTCTCTGAGTATCATCTTGCCAACTATCTAGGAGCACTGAGGTTG-AAAAAAAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacaccagcctaggcaacatagcaagattccacctctacagaaataaaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT-ACACCGCTGAACTTCAGCCTGGGTGACAGAAGACCCTGtctctctttctctctctctct s panTro4.chr3 2528325 318 - 202329955 AATTCTTCCCTGAGGCTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTAG-AAAAAAAGGGTgggagcggtggctcacacctttaatcccagtactttgagagtctgaagcaggaggatcgcttgaggccgggagttcgacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaaattacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggccaatt-acaccgctgaacttcagcctgggtgacagaagaccctgtctctctttctctctctctct i panTro4.chr3 N 0 C 0 s nomLeu3.chr11 2773006 318 - 123690457 AATTCTTCCCTGAGACTTTGTCTCTCTGAATATCATCTTGCCAACTATCTAGGAGCACTGAGGTTA-AAAAAAAGGGTgggagcggtggctcacacatttaatcccggtactttgagaggctgaagcaggaggatcgcttgaggccaggagttcgacaccagcctaggcaacatagcaagattccacctttacaaaaataaaaaaattacccaggcatgattgtgtgtgcctgtagtcccagctactcagaaggcCAATT-ACACCGCTGGACTTCAGCCTGGGTGGCAGAAGACCctctctctctctctctctctctct i nomLeu3.chr11 N 0 C 0 s rheMac3.chrUn_JH291127 37913 319 - 111706 aattcttccctgagactttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGATTTAAAAAAAAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaagccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaaatgacccaggcgtggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT-ACACGGCTGAACTTCAGCCTGGGGGACAGAAGACCTTGTTTCCCTCTCTCTCTCTCTCt i rheMac3.chrUn_JH291127 N 0 I 599 s macFas5.chr2 192353801 314 - 192460366 aattcttccctgagactttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGGTTTAAAAAAAAGGGTgggagcggtggttcacacctttaatcccagtgctttgagaggctgaagccggaggatcacttgaagccgggagttccacaccagccttggcaacatagcaagattccacctctacaaaaataaaaaaatgacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAATT-ACACGGCTGAACTTCAGCCTGGGGGACAGAAGACCCTGTTTCCctctctctctc----- i macFas5.chr2 N 0 C 0 s papAnu2.chr2 187275750 317 + 187378091 AATTCTTCCCTGAGGCTTTATCTCTCTGAATATCATCTTGCCAACTATCCAGGAGCACTGAGGTTT-aaaaaaaGGGTGggagcggtggttcacacctat-attccagtgctttgagaggctgaagcaggaggatcacttgaggccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaataaaaaagtgacccaggcatggttgtgtgtgcctgtagtctcagccactcagaaGGCCAATT-ACACcgctgaacttcagcctgggggacagaagactctgtctctctctctctctctctct i papAnu2.chr2 N 0 C 0 s chlSab2.chr15 91299229 320 + 91754291 aattcttccctgagactttatctctctgaatatcatcTTGCCAACTATCTGGGAGCACTGAGGTTTAACAAAAAGGGTgggagcagtggttcacacctttaatcccagtgctttgagaggctgaagcaggaggatcacttgaggccgggagttccacaccagcctaggcaacatagcaagattccacctctacaaaaattaaaaaatgacccaggcatggttgtgtgtgcctgtagtcccagctactcagaaggcCAGTTAACACCGCTGAACTTCAGCCTGGGGGACAGAAGACActctctctctctctctctctctct i chlSab2.chr15 N 0 C 0 a score=14059.000000 s hg38.chr3_KI270937v1_alt 319 20 + 165607 ttctttctctctctctctct s panTro4.chr3 2528643 20 - 202329955 ttctctctctctctctttct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773324 20 - 123690457 ctctctctctctctctatat i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187276067 20 + 187378091 ctctctctctctctctctct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91299549 20 + 91754291 ctctctctctctctatatat i chlSab2.chr15 C 0 I 37 e macFas5.chr2 192354115 0 - 192460366 C e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=-2530.000000 s hg38.chr3_KI270937v1_alt 339 4 + 165607 ttct-- s panTro4.chr3 2528663 2 - 202329955 tc---- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773344 4 - 123690457 atat-- i nomLeu3.chr11 C 0 I 7 s papAnu2.chr2 187276087 4 + 187378091 --atat i papAnu2.chr2 C 0 I 69 e chlSab2.chr15 91299569 37 + 91754291 I e macFas5.chr2 192354115 0 - 192460366 C e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=1008.000000 s hg38.chr3_KI270937v1_alt 343 4 + 165607 tctc s panTro4.chr3 2528665 4 - 202329955 tctc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773355 4 - 123690457 tata i nomLeu3.chr11 I 7 C 0 s macFas5.chr2 192354115 4 - 192460366 tctc i macFas5.chr2 C 0 C 0 e chlSab2.chr15 91299569 37 + 91754291 I e papAnu2.chr2 187276091 69 + 187378091 I e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=4576.000000 s hg38.chr3_KI270937v1_alt 347 12 + 165607 tctctctctctc s panTro4.chr3 2528669 12 - 202329955 tctctctctctc i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773359 12 - 123690457 tatatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354119 12 - 192460366 tctctctctctc i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91299606 12 + 91754291 tatctatctata i chlSab2.chr15 I 37 C 0 e papAnu2.chr2 187276091 69 + 187378091 I e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=5624.000000 s hg38.chr3_KI270937v1_alt 359 6 + 165607 tctATA s panTro4.chr3 2528681 6 - 202329955 tctATA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773371 6 - 123690457 tatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354131 6 - 192460366 tctata i macFas5.chr2 C 0 I 122 s papAnu2.chr2 187276160 6 + 187378091 tctatc i papAnu2.chr2 I 69 C 0 s chlSab2.chr15 91299618 6 + 91754291 tctatc i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=25595.000000 s hg38.chr3_KI270937v1_alt 365 19 + 165607 TATATATGTTTAAAAAGAA s panTro4.chr3 2528687 19 - 202329955 TATATATGTTTAAAAAGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773377 19 - 123690457 tatatatGTTTAAAAAGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354259 19 - 192460366 tatatatGTTTAAAAAGAA i macFas5.chr2 I 122 C 0 s papAnu2.chr2 187276166 19 + 187378091 tatatatgtttaaaaagaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91299624 19 + 91754291 tatatatGTTTAAAAAGAA i chlSab2.chr15 C 0 C 0 e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=302703.000000 s hg38.chr3_KI270937v1_alt 384 215 + 165607 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAGAGAAAAAAA--------------------------------AAGGCAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGGCT---AAGGTAATATTCACGAAGATG----------------------------GTATGTGGCTAGTG--CAGGTGCTGTG-AAATATTTTAAACAAAAAAA-GCCAATATTTAAACATTCTGCCTGGGAAATA s panTro4.chr3 2528706 217 - 202329955 AAAAAGAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAGAGAAAAAAG--------------------------------AAGGCAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGACT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTGTG-AAATATTTTAAACAAAAAAAAGCCAATATTTAAACATTCTGCCTGGGaaata i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773396 217 - 123690457 AAAA-GAAAGAAGTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTCAGTTTCTAAAAGAAAAAAG------------------------------AAAAGGCAAGTTTTCTTGGTTTCTTCTTAG--TTCAGAGACTCAGAGACT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTGTAAACAAAAAAA-GCCAATATTTAAACATTCTGCCTGGGAAATA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354278 205 - 192460366 AAAA--------GTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAGAAAAAAAAA-----------------------------------GCAAGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGACT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAAA-TCCAATATTTAAACATTCTGCCTGGGAAAta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276185 205 + 187378091 aaaa--------gtttgagaacagcttgggaaCTAATGAAAACCCAAAAGAGTAagtttctaaggaaaaaaaa-----------------------------------gcaagttttcttggtttcttcctgg--ttcagagaCTCAGAGACT---AAGGTAATATTCAGGAAGATG----------------------------GTATGTGGCTAGTG--TAGGtgctatg-aaatattttaaacaaaaaaa-tccaatatTTAAACATTCTGCctgggaaata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91299643 205 + 91754291 AAAA--------GTTTGAGAACAGCTAGGGAACTAATGAAAACCCAAAAGAGTAAGTTTCTAAGAAAAAAAAA-----------------------------------GCAGGTTTTCTTGGTTTCTTCTTGG--TTCAGAGACTCAGAGACT---AAGGTAATATTCAAGAAGATG----------------------------GTATGTGGCTAGTG--TAGGTGCTATG-AAATATTTTAAACAAAAAAA-TCCAATATTTAAACATTCTGCCTGGGAAATA i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2283129 283 - 31377067 AAAA-AAAAAATGTTTGAATACAGCTAGGGAGCTAATGAAAACCAAAAAGAGTAAGTTCCTAAAaaaacaaaacaaaacaaaacaaaaAAACACACACACAAAAAGACTCAATGTTTTGGGGTTTCTTCTTTGATTTAAAAGACTCAAAGTCCCTAAAGGTAAAATTCAGGGGGATGATCGGGTCTACTGGTTGACTGAGGCTTTGTCTGTGACTAGTGACTAGTGGGAGTACAAATATTTTAAACCGAACAA-TTTGATACTTAAATATCCTGCCTACCAGATA i canFam3.chr33 N 0 I 8 e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=103065.000000 s hg38.chr3_KI270937v1_alt 599 106 + 165607 TTtttctttatttatttaatatctatttttattattattat---tATTatttttattttttaagacacagggtctcgctatcttgcccaggctggtctcaaactcctgg s panTro4.chr3 2528923 96 - 202329955 tttttctttattta----atatctatttttattattattat---t------tttattttttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctgg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773613 95 - 123690457 TTTTTCTTTATTTATTTAATATTTATTTT-----TTTttat---t------tttattttttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctgg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354483 98 - 192460366 tttttctttctttatttaatata-----ttattattattattact------attactaTTTAagacacagggtctcgctatgttgcccaggctggtctcaaactcctgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276390 95 + 187378091 tttttctttctttatttagtata-----ttattattattat---t------attactatttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctgg i papAnu2.chr2 C 0 M 50 s chlSab2.chr15 91299848 95 + 91754291 TTTTTCTTTCTTTATTTAGTATA-----TTATTATTAttat---t------attactatttaagacacagggtctcgctatgttgcccaggctggtctcaaactcctgg i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=12159.000000 s hg38.chr3_KI270937v1_alt 705 14 + 165607 cctcgagtgatcct s panTro4.chr3 2529019 14 - 202329955 cctcaagtgatcct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773708 14 - 123690457 cctcaagtgatcct i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192354581 14 - 192460366 cctcaagtggtcct i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91299943 14 + 91754291 cctcaagtggtcct i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I e papAnu2.chr2 187276485 50 + 187378091 M e rheMac3.chrUn_JH291127 38232 599 - 111706 I a score=100392.000000 s hg38.chr3_KI270937v1_alt 719 81 + 165607 cccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCCTGGGAAATAATTTTTTTTT s panTro4.chr3 2529033 80 - 202329955 cccacct-ggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCCTGGGAAATAATTTTTTTTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773722 81 - 123690457 cccaccttggcctcccaaaatgctgggattacagacatgagccaccatgcctggccTCTGCCTGGGAAATAATTTTCTTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38831 81 - 111706 cccaccttggactcccaaagtgctgggattacagacatgagctaccatgcctggccTCTGCCTGGGAAATAATGTTTTAAA i rheMac3.chrUn_JH291127 I 599 C 0 s macFas5.chr2 192354595 81 - 192460366 cccaccttggactcccaaagtgctgggattacagacatgagccaccatgcctggccTCTGCCTGGGAAATAATGTTTTAAA i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91299957 81 + 91754291 cccaccttggactcccaaagtgctggaattacagacatgagccaccattcctggccTCTGCCTGGGAAATAATGTTTTTTA i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2283412 8 - 31377067 I e papAnu2.chr2 187276485 50 + 187378091 M a score=93599.000000 s hg38.chr3_KI270937v1_alt 800 67 + 165607 AAAAAGTGGTTATGGTCAATAATATTAGCTTCTTGGTAGTCTGTGACCAGGGCAAGAGTATATGCAT s panTro4.chr3 2529113 67 - 202329955 AAAAAGTGGTTATGGTCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773803 67 - 123690457 TTAAAGTGGTTATGATCAATAATATTAGCTTCATGGTAGTCTGTGACCAGGGCAAGAGTATATGCAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38912 67 - 111706 AAAAAGTAGTTATGACCGATGATATTAGCTTCATGGTAGTCTGTGACCAGGACGAGAGTATATGCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192354676 67 - 192460366 AAAAAGTAGTTATGACCAATGATATTAGCTTCATGGTAGTCTGTGACCAGGACGAGAGTATATGCAT i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91300038 67 + 91754291 AAAAAGTAGTTATGACCAATGATATTAGCCTCATGGTAGTCTGTGACCAGGACAAGAGTATATGCAT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2283420 64 - 31377067 AAAAAATAGACATGATCAATTAAATTAA---CATTGTATGACATGATGAGAGATAGAATATGTACAC i canFam3.chr33 I 8 C 0 e papAnu2.chr2 187276485 50 + 187378091 M a score=382470.000000 s hg38.chr3_KI270937v1_alt 867 215 + 165607 TTACCCCTTGGGTTTTTTA-CCAGATTGGCACAGATGTTAACAACGAAAAAGAAAAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAATGCTA-TAATTCAAGTTGAGAGAGTTAACCCGGCTTATAGCAGGGGTACTGTTTGCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACCTTCCTCCTCACAAGGAAGAC s panTro4.chr3 2529180 215 - 202329955 TTACCCCCTGGGTTTTTTA-CTAGATTGGGACAGATGTTAACAACGAAAAAGAAAAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAATGCTA-TAATTCAAGTTGAGAGAGTTAACCCGGCTTATAGCAGGGGTACTGTTTCCCTCTTCCCATGGAGTTTAACACAGTTAATTCACCATTCTAGTCTAACCTCACTTTCCTCCTCACAAGGAAGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2773870 214 - 123690457 TTA-CCCTTGGGTTTTTTA-CTAGATTGGGACAAATGTTAATAACGAAAAAGAAAAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAATGCTA-TAATTCAAGTTGAGAGAGTTAACCCAGCTTATAGCAGAGGTACTGATTCCCTTTTCCCATGGAGTTTAACACAGTTCATTCACCATTCTAGTCTAACCTCACCTTCCCCCTCACAAGGAAGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 38979 211 - 111706 TTACCGCTTGGGTTTTTTA-TTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAACGCTG-TAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTTCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACGAAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192354743 211 - 192460366 TTACCGCTTGGGTTTTTTA-TTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAACGCTG-TAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTTCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACGAAGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276535 214 + 187378091 TTACCGCTTGGGTTTTTTATTTAGATTGGGATAAATGTT---AACGAAACAGAACAgtagaaatttaat-----ttattttttaaaaaagataacgCTGTTAATTCAAGGTGAGAGAGTTAACCCGGCTTACAGCAG-GGTACCGTTGCCGTCTTCCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCTAACCTTACCTTCCTCCCCACAACGAAGAC i papAnu2.chr2 M 50 C 0 s chlSab2.chr15 91300105 211 + 91754291 TTACCGCTTGGGTTTTTTA-TTAGATTGGGATAAATGTT---AACGAAACAGAACAGTAGAAATTTAAT-----TTA-TTTTTAAGAAAGATAATGCTG-TAATTCAAGGTAAGAGAATTAACCCGGCTTACAGCAG-GGTACTGTTTCCGTCTTGCCATGGAGTTTAAAACAGTTCATTCACCATTCTAGTCCAACCTTACCTTCCTCCCCACAAGGAAGAC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2283484 181 - 31377067 TTACTCCTTAGG-TTTCTG-CTAGA-----ACAAATGTTTAAGATGAGGGGGGGAAGTAGACatttaattattatta-tttttaa-------aatGTTC-TAGTTC----TGCAAGAGCTAAC------------------ATTGTCTCCCACT----GAGGGGTTTAAAACAGTCTGGTAACCATTCTAGTCTAACCTTGTCCTCCTCTTCATAAGGAAAAC i canFam3.chr33 C 0 I 288 a score=44691.000000 s hg38.chr3_KI270937v1_alt 1082 25 + 165607 AGGCGGGAGCTGGAGAAGACCATTG s panTro4.chr3 2529395 25 - 202329955 AGGTGGGAGCTGGAGAAGACCATTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2774084 25 - 123690457 AGGCGGGAGCTGGAGAAGACCATTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39190 25 - 111706 AGCCGGGAGCTGGAGAAGACCATGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192354954 25 - 192460366 AGCCGGGAGCTGGAGAAGACCATGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276749 25 + 187378091 AGCCGGGAGCTGGAGAAGACCATGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91300316 25 + 91754291 AGCCGGGAGCTGGAGAAGACCATTG i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2283665 288 - 31377067 I a score=193459.000000 s hg38.chr3_KI270937v1_alt 1107 101 + 165607 GCTATATTCCTGCAACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGGCCTTCCTCTGTGGGAATCCTGCACCCCCATCTCTCTCTCCtttt s panTro4.chr3 2529420 100 - 202329955 GCTATATTCCTGCAACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTATCAGGGGCCTTCCTCTGTGGGAATACTGCACTCCCAtctctctctccttt- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2774109 100 - 123690457 GCTATATTCCTGCGACTGTGCTTTTTCTAGACGA-TTGAAGCAGTGCCTATCAGGGGCCTTCCTCTGTGGGAATTCGGCACCCCTATCTCTCtctctctct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39215 101 - 111706 GCTGTACTCCTGGGACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTCTCAGGGGCCTTCCTCCGTGGGGATCCTGCACCCCCATCtctctctctctct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192354979 101 - 192460366 GCTGTACTCCTGGGACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTCTCAGGGGCCTTCCTCCGTGGGGATCCTGCACCCCCAtctctctctctctct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276774 99 + 187378091 GCTGTACTCCTGGGACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTCTCAGGGGCCTTCCTCCGTGGGGATCCTgcacccccatctctctctctct-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91300341 100 + 91754291 GCTATACTCCTGGGACTGTGCTTTTTCTAGGCGATTTGAAGCAGTGCTTTTCAGGTGCCTTCCTCTGTGGGGATCCTGCACCCCCATCtctctctctct-t i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2283953 100 - 31377067 GTTATATTTCTGAAATCTTTTCTTTTGTA-ACAATTTGCAGCAGTCCTGATCAGGTGCCTTACTCTGTAGGAATCCTGCACCTCCACCCTTTAGTCTTGTT i canFam3.chr33 I 288 I 3246 a score=1068325.000000 s hg38.chr3_KI270937v1_alt 1208 641 + 165607 ttattttatttatttattttttttttgagacagaatcttgctctgtcgcccaggctgcagtgaagtggcatgatgtctgctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctatttctgta--tttttttttctagtagagacggggttttgccatattgcccaggctggtctc-----------------gcactcctgacctcaagtgatccacccatctcagcctcccaaagtgctgggattgcaggtggg-gctaccatgcccggccCCATCTCTTATTATTTTTTTATCCCCCAAATATGTACAGTTGTGATATATTAATTTTTCA-TTTTTTCTTtttatttcttttca--tttttactttaagtttcaggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatcacctgcatgtattagctatttatcctgacgctcttcctccccttgtcccgtccctgacaggcgccagtgtgtgttgttcccctctctgtgtccatgtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttt s panTro4.chr3 2529520 626 - 202329955 ----------------ttttttttttgagacagaatcttgctctgtcgcccaggctgcagtgtagtggcatgatgtctgctcactgcaacctccacctcctgggttcaagcaaatctcctgcctcagccttttgagtaactgggattacaggcacccaccaccacgcccagctatttctgta--tttttttttctagtagagacggggttttgccatgttgcccaggctggtctc-----------------gcactcctgacctcaagtgatccacccgtcttggcctcccaaagtgctgggattgcaggtggg-gctaccatgcccggccCCATCTCTTATTATTTTTTTATCCCCAAAATATGCACAATTGTGATATATTAATTTTTCA-TTTTTTCTTtttatttcttttca-ttttttactttaagtttcgggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatcacctgcatgtattagctatttatcctgacgcttttcctccccttgtcccgtccctgacaggcgccggtgtgtgttgttcccctccctgtgtccaagtgttctcattgttcaactccaacttatgagtgaaaacatgcagtgtttggttt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2774209 640 - 123690457 ctcttttttt------ttttttttttgagacagaatcttgctctgtcgcccaggctgcagtgcagtggcatgatctctgctcactgcaacctccacctcctgggttcaagcaattctcctgcctcagccttttgagtagctgggattacaggaacccaccaccatgcccagccatttctgtatttttttttttctagtagagatggggttttgccatgttgcctgggctggtctt-----------------gcactcctgacctcaagtgatccactcatctcggcctcccaaagtgctcggattgcaggtggg-actaccatgcctggtcCCATCTCTTATTATTTTTTTATCCCTCAAATATGTACAATTGTGATATATTAATTTTTCATTTTTTTCTTTTTAtttcttttcatttttttactttaagtttcgggatacatgtgcagaacgtgcaggtttgttacacaggtatatatgtgccatggtggtttactgcacctatcaacccatcacctgcatacattagctatttatcctgacgctcttcctccccttgtcccgcccctgacaggcgctggtgtgtgttgttcccctccctgggtccatgtgttctcattgttccactccaacttctgagtgagaacatgcagtgtttggttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 39316 625 - 111706 ctctttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctggagtgcagtggcgtgatctctgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttttgta-ttttttttttctggtagagacggggttttgtcatgttgcccaggctggtctcnnnnnnnnnnnnnnnnn---------------------ccactcacctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA-TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-ttttttcttttta-----tttcacttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacatagatatatgtgtgtcacggtggtttgctacacctatcaacccatcacttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacagg-cctggtatgtgctgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttt i rheMac3.chrUn_JH291127 C 0 I 7772 s macFas5.chr2 192355080 629 - 192460366 ctctttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctggagtgcagtggcgtgatctctgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccaccatgcccagccatttctgta-ttttttttttctggtagagacggggttttgtcatgttgcccaggctggtctc-----------------acactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccCTATCTCTTATTA-TTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTCTtttta-----tttcacttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacataggtatatgtgtgtcatggtggtttgctacacctatcaacccatcacttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacagg-cctggtatgtgctgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187276873 629 + 187378091 -tttttt---------ttttttttttgagacagaatcttgctctgtcgcccaggctggagtgcagtggcgtgatctctgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcatccgccaccatgcccagccatttctgta--tttttttctctggtagagacagggttttgtcatgttgcccaggctggtctt-----------------gaactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtgggagctaccatgcccagccctatctcttattatttttttattccccaaatatgtacaattgcaatatattaatttttca-ttttttcttttta-----tttcacttttttactttaagtttcgAGATACATGTGCAgcaaatgcaggtttgttacataggtatatgtgtgtcatggtggtttgctacacctatcaacccatcacttgcatgcattagctatttatcctgacaCTCTTCCTCCCCTTGTCCCGCCCCctacaggccctggtatgtgctgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91300441 630 + 91754291 ttttttt---------ttttttttttgagacagactcttgctctgtcacccaggctggagtgcagtggcgtgatctctgctcactgcgacctccacctcctgggttcaagtgattctcctgcctcagagttttgagtagctgggattacaggcacccgccagcatgcccagccatttctgta--tttttttttctggtagagacagggttttgtcatgctgcccaggctggtctc-----------------gcactcctgacctcaagtgatccactcgcctcggcctcccaaagtgctgggattgcaggtggaagctaccatgcccagccCTATCTCTTATTATTTTTTTATTCCCCAAATATGTACAATTGCAATATATTAATTTTTCA-TTTTTTCTtttta-----tttcacttttttactttaagtttcgagatacatgtgcagcaaatgcaggtttgttacataggtatatgtgtgccatggtggtttgctacacctatcaacccatcacttgcatgcattagctatttatcctgacactcttcctccccttgtcccgccccctacaggccctgggatgtgctgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgcagtgtgtggttt i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I a score=773910.000000 s hg38.chr3_KI270937v1_alt 1849 621 + 165607 tctgttcccctgttagtttgttgaggatgatggctttcagcttcatccatgtacctgcaaaggacgtgatcccattcc-tttttcatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtaaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagcgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgagtggtgtgagatgatatccctttgtagttttgatttgcatttctctaatgatccatgatgatgagccttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcctgctttttgatggggttgtttatttttttcttgtaaatttaagttcct s panTro4.chr3 2530146 621 - 202329955 tctgttcccctgttagtttgttgaggatgatggcttccagcttcatccatgtacctgcaaaggatgtgatcccattcc-ttttttatggctgcatagtattccgtgctgcatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcagtaaacatacgtgtgcatgtatctttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcgccacactgtcttccacaatggttgaactgatttacactcccaccaacagtgtaaaagtgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatgatatcccattgtagttttgatttgcatttctctaatgatccatgatgatgagctttttttcatatgtttgttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcctgctttttgatggggttgtttatttttttcttgtaaatttaagttcct i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2774849 619 - 123690457 tctgttcctctgttactttgttgaggatgatggctttcagcttcatccatgtacctgcaaaggacatgatcccattcc-ttttttatggctgcatagtattctgtgctgtatatgtaccacattttctttatccagtctatcactgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcagtaaagatacatgtacatgtatccttataacagaatgatttatattcctttgggcatatacccagtaatgggattgctgggtcaaatggtatttctggttctagatccttgaggaatcaccacactgtcttccacaatggttgaactaatttacactcccaccaagagtgtaaaaccgttcctatttcaccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgggagatgatatcccattgtggttttgatttgcatttccctaatgatccatgatgatgagcttttttgc--atgttggttggtggcataaatgtcttcttttgataagtgtctgttcatatcctttgcccgctttctgatggggttgtttatttttttctcgtaaatttaacttcct i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192355709 614 - 192460366 tctgttcgtgtgttagtttgctgag---gatgtcttccagcttcatccatgtccctgcaaaggacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatacatgtgcatgtatctttataacggaa-gatttatattcctttgggtatatagccagtaatgggatggctgagtcaaatggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagcgttcatatttctccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggtgtgagatggtatcccattgtggttttgatttgcatttctctaatgatccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagtgccta-tcatatcctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaaattcct i macFas5.chr2 C 0 I 5347 s papAnu2.chr2 187277502 617 + 187378091 tctgttcgtgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaagacatgatcccattgctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaatagtgctgcaataaacatatatgtgcatgtatctttataacggaa-gatttatattcctttgggtatataaccagtaatgggatggctgagtcaaatggtatttctggttttagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagttttcgtatttctccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcatgagatggtattccattgtggttttgatttgcatttctctaatgatccatgattataagctttttttcatatgtttgctggtggcataaatgtcttcttttgataagtgccta-tcatatcctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaagttcct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91301071 618 + 91754291 tctgttcgtgtgttagtttgctgaggatgatgtcttccagcttcatccatgtccctgcaaaagacatgatcccattcctttttttatggctgcatagtattccatgctgtatatgtaccacattttctttatccagtctgtcagtgatggacatttgggttggtttcatgtctttactattgtgaataatgctgcaataaacatacatgtgcatgtatctttataacggaatgatttatattcctttgggtatatacccagtaatgggatggctgagtcaaatggtatttctggttctagatccttgaggaatccccacactgtcttccacaatggttgaactgatttacattcccaccaagagtgtaaaagtgttcgtatttctccacagccttgccagcatctgctgtttcttgactttttaataattgccattctgactggcgtgagatggtatcccattgtggttttgatttgcatttctctaatgatccatgattataagctttttttcatatgtttgctggcggcataaatgtcttcttttgataagtgccta-tcatattctttgcccactttttgatgggtttgt---tttttgtcttgtaaatttaagttcct i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I a score=80024.000000 s hg38.chr3_KI270937v1_alt 2470 96 + 165607 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttgtaggttgcctgtttgctctgatgatagtttctttt s panTro4.chr3 2530767 96 - 202329955 tgtaaattctggatattagacctctgtcagatggttagattgcaaaaattttctcattttgtaggttgcctgtttgcgctgatgatagtttctttt i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775468 96 - 123690457 tgtaaattcgggatattagacctctgtcagatggttagattgcaaaaattttctcatttcacaggttgcctgtttgctctgataataatttctttt i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187278119 96 + 187378091 ggtaaattctggatattagacctctctcagatgggtagattgcaaaaattttctcattttgtaggtttcctgtttgctctgatgatagtttctttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91301689 96 + 91754291 gataaattctgtatattagacctctctcagatgggtagattgcaaaaattttctcattttgtaggttgcctgtttgctctgatgatagtttctttt i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I a score=148882.000000 s hg38.chr3_KI270937v1_alt 2566 288 + 165607 gctgtgcagagctctttagtttaattagatcccatttgtcaattttagcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacctgccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttattgaatagagaatcctttcccc s panTro4.chr3 2530863 288 - 202329955 gctgtgcagagctctttagtttaattagatcccatttgtcaattttggcttttgttgcaagtgcttttggagatttcatcataaaatctttgcctatgtctatgtcctgaatggtattgcctaggttttcttctagggttttcatggtttggggttttacatgtaagtctttaacccgccttgagttaatttttgtataaggtgtgaggaaggggtccagtttcagttttctgcatatggctaaccagttttcccagcaccatttattgaatagagaatcctttcccc i panTro4.chr3 C 0 M 3000 s papAnu2.chr2 187278215 284 + 187378091 gctgtgcagagctctttagtttaattagatcccatttgtctattttatcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggtttggggctttacatttaagtctttagtccaccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaatcctttcccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91301785 284 + 91754291 gctgtgcagagctctttagtttaattagatcccatttgtctattttatcttttattgcaattgcttttggagatttcatcataaaatctttgcccattcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggtttggagctttacatttaagtctttagtccaccttgagttaatttttgtataaggtgtaaggaaggggtccagtttcagttttctgcatatggctagccagttttcccagcaccatttat----tagagaatcctttcccc i chlSab2.chr15 C 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=73306.000000 s hg38.chr3_KI270937v1_alt 2854 273 + 165607 attgcctgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtatctattctgttccattggtttatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcttaggattgtcttggctatttgggttcttttttgattccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt s papAnu2.chr2 187278499 272 + 187378091 attgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaAGGTCTCTATTCtg-tccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggactGTCTTGGTtattcgggctcttttttggttccatatgaattttaaagtagtttgttctcattctgtgaagaatggtagttt i papAnu2.chr2 C 0 I 7105 s chlSab2.chr15 91302069 272 + 91754291 attgcttgcttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtcttatttccaaggtctctattctg-tccattggtctatatgtcagttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcctcccactttgttctttttgcctaggattgtcttggttattcgggctcttttttggttccatatgaattttaaagtagtttgttctcattctttgaagaatggtagttt i chlSab2.chr15 C 0 I 5969 e canFam3.chr33 2284053 3246 - 31377067 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=0.000000 s hg38.chr3_KI270937v1_alt 3127 101 + 165607 tcacatcctttgttagctgtattcctaggtattttattctatttgtagcaattgtgaataggagttcattcatgatttagctctctgcttgcctattttgg e canFam3.chr33 2284053 3246 - 31377067 I e chlSab2.chr15 91302341 5969 + 91754291 I e papAnu2.chr2 187278771 7105 + 187378091 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=311.000000 s hg38.chr3_KI270937v1_alt 3228 2 + 165607 tT s papAnu2.chr2 187285876 2 + 187378091 TC i papAnu2.chr2 I 7105 C 0 s calJac3.chr17 73787656 2 + 74750902 TC i calJac3.chr17 N 0 C 0 e canFam3.chr33 2284053 3246 - 31377067 I e chlSab2.chr15 91302341 5969 + 91754291 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 39941 7772 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=153534.000000 s hg38.chr3_KI270937v1_alt 3230 164 + 165607 CACTCCAGGAACCACAGAGGACACATTAATAACTGGAAGTAAAACTGCTGCCCCAGTCACCTCAACAGGCTCAACAACAGCGACACTAGAGGGACAATCAACTGCAGCTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCATCTCAGAACCACCAGACTA s rheMac3.chrUn_JH291127 47713 164 - 111706 CACTCCAGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAAATCCTACTGCAGTCACCTCAGCAGGCTCAGTAGCAATGACACTAGAGGGACAATCAACTGCAACTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCATCTCAGAACCACCAGACTA i rheMac3.chrUn_JH291127 I 7772 C 0 s papAnu2.chr2 187285878 164 + 187378091 CACTCCGGGAACCACAGGGGAAACATCAACAACTGGAAGTAAAACTCCTGCCGCAGTCATCTCAGCAGGCTCAGCAGCAGTGACACTCGAGGGACAATCAACTGCCACTTCTTCAAGGACCTCTAATCAGGACATATCAGCTTCATCTCAGAACCACCAGACTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91308310 161 + 91754291 CACTCCAGGAACCACAGGGGAAA---CAACAACTGGAAGTAAAAATCCTACTGCAGTCACCTCAGCAGGCTCAGTAGCAATGACACTAGAGGGACAATCAACTGCAACTTATTCAAGGACCTCTAATCAGGACATATCAGCTTCATCTCAGAACCACCAGACTA i chlSab2.chr15 I 5969 I 2217 s calJac3.chr17 73787658 164 + 74750902 CACTCCAGGAAGCACAGAGGAAACATCAACAACTGGAAGTGAAAACACTGCCCTAGTCACCTCAGCAGGCTCGATAACAGCTACACTAGAGGGACAATCAACAGCAACTTCTTTAAGAACCTCTAATCAGGGAATATCAGCTTCATCTCAGAACCACCAGACTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2287299 164 - 31377067 CACTGCTGTCAACACAGGGTCCATGCCACCAGGTGTCACGGGAAGTGTTACTCCAGTCAGCTCAACAGGCTCAATGACAAGTGGACCAGAGGGACACTCAACAGCACATTCCACCCTGACTTCTACTCCGGAGACAACAGTGTCATCTCAGGGTCACACGACCC i canFam3.chr33 I 3246 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=8429.000000 s hg38.chr3_KI270937v1_alt 3394 9 + 165607 AGAGCACGG s rheMac3.chrUn_JH291127 47877 9 - 111706 AGAGCATGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187286042 9 + 187378091 AGAGCATGG i papAnu2.chr2 C 0 I 357 s chlSab2.chr15 91310688 9 + 91754291 AGAGCACAG i chlSab2.chr15 I 2217 C 0 s calJac3.chr17 73787822 9 + 74750902 ATGGCACGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2287463 9 - 31377067 AGACCATGG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=4230.000000 s hg38.chr3_KI270937v1_alt 3403 3 + 165607 AGA s rheMac3.chrUn_JH291127 47886 3 - 111706 AGA i rheMac3.chrUn_JH291127 C 0 I 3497 s papAnu2.chr2 187286408 3 + 187378091 AGA i papAnu2.chr2 I 357 C 0 s chlSab2.chr15 91310697 3 + 91754291 AGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73787831 3 + 74750902 AGA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2287472 3 - 31377067 AGA i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=64587.000000 s hg38.chr3_KI270937v1_alt 3406 82 + 165607 CCACCAGCAAAGCTCAAACCGACACCCTCACGCAGATGATGACATCAACTCTTTTTTCTTCCCCAAGTGTACACAATGTGAT s rheMac3.chrUn_JH291127 51386 82 - 111706 CCACCAGTGAAGCTCAAACCAGCACCCTCACACAGATGATGACATCAACACTTTCCTCTTCCCCAAGTGTACTCAATGTGAC i rheMac3.chrUn_JH291127 I 3497 C 0 s papAnu2.chr2 187286411 82 + 187378091 CCACCAGAAAATCTCAAATCAGCACTCTCACACAGATGACGACATcaactctttccttctctccaagTACACACAATGTGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91310700 82 + 91754291 CCACCAGTGAAGCTCAAACCAGCACCCTCACACAGATGATGACATCAACACTTTCCTCTTCCCCAGGTGTACTCAATGTGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73787834 82 + 74750902 GCACCAGAGAAGCTCAAACCAGCACCCTCACACAGGGAACTACATCAACTCCTTCCTCTTCCCCAGGTGTACTGAATGTGAC i calJac3.chr17 C 0 I 2241 s canFam3.chr33 2287475 68 - 31377067 CCAGCACAGAGTCTGCAACCAGCAGTGTCTCAGCGATGATCACATCCTCTCCCTCATCCTCCCAAAGA-------------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=7465.000000 s hg38.chr3_KI270937v1_alt 3488 6 + 165607 GGAGAC s rheMac3.chrUn_JH291127 51468 6 - 111706 GGAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187286493 6 + 187378091 AGGGAC i papAnu2.chr2 C 0 I 1503 s chlSab2.chr15 91310782 6 + 91754291 GGAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73790157 6 + 74750902 GGAGAC i calJac3.chr17 I 2241 C 0 s canFam3.chr33 2287543 6 - 31377067 GGAGAC i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=63.000000 s hg38.chr3_KI270937v1_alt 3494 2 + 165607 AG s rheMac3.chrUn_JH291127 51474 2 - 111706 GG i rheMac3.chrUn_JH291127 C 0 I 1146 s chlSab2.chr15 91310788 2 + 91754291 GG i chlSab2.chr15 C 0 I 1146 s calJac3.chr17 73790163 1 + 74750902 -A i calJac3.chr17 C 0 I 1 s canFam3.chr33 2287549 1 - 31377067 -A i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187286499 1503 + 187378091 I e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=3742.000000 s hg38.chr3_KI270937v1_alt 3496 6 + 165607 CTCCTC s rheMac3.chrUn_JH291127 52622 6 - 111706 CTCCTG i rheMac3.chrUn_JH291127 I 1146 C 0 s chlSab2.chr15 91311936 6 + 91754291 CTCCTG i chlSab2.chr15 I 1146 C 0 s calJac3.chr17 73790165 6 + 74750902 CCCCTC i calJac3.chr17 I 1 C 0 s canFam3.chr33 2287550 6 - 31377067 CTCCTA i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187286499 1503 + 187378091 I e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=6485.000000 s hg38.chr3_KI270937v1_alt 3502 5 + 165607 CAGAT s rheMac3.chrUn_JH291127 52628 5 - 111706 CAGAT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187288002 5 + 187378091 CAGGT i papAnu2.chr2 I 1503 C 0 s chlSab2.chr15 91311942 5 + 91754291 CAGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73790171 5 + 74750902 CAGAT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2287556 5 - 31377067 CAGAT i canFam3.chr33 C 0 I 537 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=439996.000000 s hg38.chr3_KI270937v1_alt 3507 495 + 165607 GAAATGACCACATCAT-----TTCCC-------------------TCCAGTGTCACCAACACACTCATGATGACATCAAAGACTATAACAATGACAACCTCCACAGACTCCACTCTTGGAAACACAGAAGAGACATCAACAGCAGGAACTGAAAGTTCTACCCCAGTGACCTCAGCAGTCTCAATAACAGCTGGACAGGAAGGACAATCACGAACAACTTCCTGGAGGACCTCTATCCAAGACACATCAGCTTCTTCTCAGAACCACTGGACTCGGAGCACGCAGACCACCAGGGAATCTCAAACCAGCACCCTAACACACAGAACCACTTCAACTCCTTCTTTCtctccaagtgtacaca-atgtgacagggactgtttctcaGAAGACATCTCCTTCAGGTGAAACAGCTACCTCATCCCTCTGTAGTGTCACAAACACATCCATGATGACATCAGAGAAGATAACAGTGACAACCTCCA------------------------------------------------------------------------------CAGGCTCCACTCTTGGAAACCCAGGGGAGACATCATCA s rheMac3.chrUn_JH291127 52633 492 - 111706 GAAATGACCACATCAT-----TTCCC-------------------TCCAGTGTCACCAACACGCTCATGATGACATCAAAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACATAGAAGAGACATCAACACCAGGAACTGAAAGTTCTACCCCAGTGACCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACGAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCTTCGCAGAACCACCAGACTCAGAGCACTGAGACCACCAAAGAATCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCGTCTCCCCAAGTGTACACA-ATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACAAACACACCCATGATGACATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA---CATCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187288007 492 + 187378091 GAAATGACCACCCCAT-----TTCCC-------------------TCCAGTGTCACCAACACACTCATGATGACATCAAAGACTATAACAATGACAACCTCAACAGGCTCCACTGTTGGAAACACAGAAGAGACATCAACACCAGGAACTGAAAGTTCTACCCCAGTGATCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACGAACAACGTCCTCAAGAACTTCTATCCAGGACACATCAGCTTCTTCGCAGAACCACCAGACTCAGAGCACTGAGACCACCAAAGAATCTCAAACCAGCACTCTTACACAGAGAACCACATcaattccttccttctccccaagTGTACACA-ATGTGAAAGGGACTATttctcagaagacatttcctcCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACAAACACACCCATGATGACATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA---CATCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91311947 492 + 91754291 GAAATGACCACATCAT-----TTCCC-------------------TCCAGTGTCACCAACACGCTCATGATGACATCAAAGACTATAGCAATGACAACCTCCACAGACTCCACTCTTGGAAACATAGAAGAGACATCAACACCAGGAACTGAAAGTTCTACCCCAGTGATCTCAGCAGTCTCAATAACAGCTGAACTGGAAGGACAATCACACACAACGTCCTCAAGGACTTCTATCCAGGACACATCAGCTTCTTCGCAGAACCACCAGACACAGAGCACAGACACCACCAGAGAGTCTCAAACCAGCACTCTTACACAGAGAACCACATCAATTCCTTCCTTCTCCCCAAGTGTACACA-ATGTGAAAGGGACTATTTCTCAGAAGACATTTCCTCCAGGTGAAACAACTACCTCATCCCTCTTTAGTGTCACAAACACACCCATGATGATATCAAAGAAGATAACAACGACAACCTCCA------------------------------------------------------------------------------CAGACTCCACTCTTGGAAACACAGGGGAGA---CATCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73790176 492 + 74750902 GAAATGACCACCTCAT-----CCCCA-------------------TACGGTGTCACCAACACACCCATGATGACATCAAAGACTATAACAATGACAACATCTACTGAATCCACTCTTGGAAACCCAGAGGAGACATCAACACCTGGAACTAAAAGTTCTACCTCAGTGAGCTTAGCAGTGTCAATAACAGCTGAACCAGAAGGACACTCACAAACAACTTCTTCGAGGACCTCTATCCAGGACACATCAGCTTCCTCTCAGAACCACCAGATTCAGAGCACAGAGACCACTAGAGAGTCTCAAACCAGCACCTTCACACAGATGTCCACATCAACTCTTTCATCCTCCCCAAGTGTACACA-ATGTGGCCACAACAGTTTCTCAGGACACATTTCCTCCAGATGAAACAACTGCCTCATTCCTCTCTAGTGTCACGGACGCATCCACGGTGACATCAAAGGTTATAACAATGGCAGCCTCCA------------------------------------------------------------------------------CAGACACCACTCTTGGAAGCACAGCAGAGA---TATCA i calJac3.chr17 C 0 I 375 s canFam3.chr33 2288098 594 - 31377067 GAAATGGCCACACCATCAGCCTCCCCTGGTGACACTTCAAGATCTTCCAGTGGAAGCAACACATCAGCAACGACATCACAGGTCCCGACGACATCGATTGCAACAGACACCCCAGCAGGAACCACGGGACACACGTCACCACCTGAAACGGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAGGTGGACCAGGGGGACACTCACCAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACATCGTCATCTCAGGGTCACATGACCCAGACCATAGAGACCAGCACAGAGTCTGCAACCAGCAGTGTCTCAGCGATGATCACATCCACTCCCTCATCCTCCCGAAGTGAACACACACCTACAGATGACT-CGACCCAGGACATGGCCTTGTCTGACACACCAGGTACTTCATCCCTTTCCAGTGTCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTGGGGACACTTCAAGATCTTCCAGTGGAAGCAACACATCACCAATGACATCACAGGTCCCGACGACACTGATTGCATCAGACACCCCAGCAGGAACCACGGGACACA---CGTCA i canFam3.chr33 I 537 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=118359.000000 s hg38.chr3_KI270937v1_alt 4002 120 + 165607 GTACCTGTTACTGGAAGTCTTATGCCAGTCACCTCAGCAGCCTTAGTAACATTTGATCCAGAAGGACAATCACCAGCAACTTTCTCAAGGACTTCTACTCAGGACACAACAGCTTTTTCT s rheMac3.chrUn_JH291127 53125 120 - 111706 GTACCTGTTACAAGAAGTCTTATGCCAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACTACAGGTTTTTCT i rheMac3.chrUn_JH291127 C 0 I 378 s papAnu2.chr2 187288499 120 + 187378091 GTACCTGTTACAAGAAGTCTTATGCCAGTCACTTCAGCAGCCTCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACAACAGATTTTTCT i papAnu2.chr2 C 0 I 378 s chlSab2.chr15 91312439 120 + 91754291 GTACCTGTTACAAGAAGTCTCATGCCAGTCACTTCAGCAGCCCCAATAACAGCTGAGCCAGAAGGACAATTACCAGCAACTTCCTCAAGGACTTCTACTCAGGACACAACAGGTTTTTCT i chlSab2.chr15 C 0 I 4894 s calJac3.chr17 73791043 117 + 74750902 GTACCTGTTACAGGAAGTCTTATGCCAGTCACCTCAGTAGCCTCAATAACAGTCGAACCAGAAGGAGAATCCTCTGCAACTTTCTCAAGGACTT---CTCAGTACACAACAGCTTTTCCT i calJac3.chr17 I 375 C 0 s canFam3.chr33 2288692 120 - 31377067 CCACCTGAAACAGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACAGCGTCATCT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=1146288.000000 s hg38.chr3_KI270937v1_alt 4122 1434 + 165607 AAGAACCACCAGACTCAGAGCGTGGAGACCACCAGAGTATCTCAAATCAACACCCTCAACACCCTCACACCGGTTACAACATCAACTGTTTTATCCTCACCAAGTGGATTCAACCCAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACCTCATCCCCTTCCAGTGTCAGCAATACA-------------------------------------TTCCTGGT-----------------------------------------AACATCAAAGGTGTTCAGAA---TGCCAACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAGACATCACTATCTGTAAGTGGAACCATTTCTGCAATCACTTCCAAAGTTTCAACCATATGGTGGTCAGACACTCTGTCAACAGCACTCTCCCCCAGTTCTCTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCA----CAGGACGGCCTCATGAGAGGAGCTCATTCTCTCCAGGTGTGTCTCAA------------GAAATATTTACTCTACATGAAACAAC----------AACATGGCCT--------------------TCCTCATTCTCCAGCAAAGGCCACACAACTTGGTCACAAACAGAACTGCCCTCAACATCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAATCCATCTA------------------------CAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTAAGGTCTCAGCAATAGGGGAACCAGGAGA--GCCCACCA-CATACTCCTCCCACAGCACAACTCTCCCAAAAACAACAGGGGCAGGCGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGCTCTTCTCAGCAGCCCAAGCTACAGTGTGACTCAGATGATAAAAACGGCCACATCCCCATCTTCTTCACCTATGCTGGATAGACACACATCCCAACAAATTACA-ACGGCACCATC---AACAAATCATTCAACAATACATTCCACAAGCACCTCTCCTCAGGAATCACCAGCTGTTTCCCAAAGGGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CACAAACCACGAGGTCCGTCTCCCCCATGACTGACA---CCAAGACAGTCACCACCCCAGGTTCTTCCTTCACAGCCAGTGGGCACTCGCCCTCAGAAATTGTTCCTCAGGACGCACCCACCATAAGTGCAGCAACAACCTTTGCCCCAGCTCCCACCGGGGATGGTCACACAACCCAGGCCCCGACCACAGCACTGCAGGCAGCACCCAGCAGCCATGATGCCACCCTGGGGCCCTCAGGAGGCACGTCACTTTCCAAAACAGGTGCCCTTACTCTGGCCAACTCTGTAGTGTCAACACCAGGGGGCCCAGAAGGACAATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCATACCCACCAGGCTGAGAGCACAGAGGCCTCTGGACAAACACAGACCAGCGAACCGGCCTCCTCAGGGTCACGAACCACCTCAGCG s rheMac3.chrUn_JH291127 53623 1419 - 111706 CAGAACCACCAGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA---------TCAACACCCTCACACCGGTTACAACATCAACTGTTTTATCCTCACCAAGTGGATTCAACCCAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACGCA-------------------------------------TTCCTGGT-----------------------------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGACCA----TAGGACGGCCTTATGAGAGGAGTTCAGTGTCTCCAGGTGTGTCTCAT------------GAGACATTTCCTCCACATGAAACCAT----------AACATGGCCT--------------------TCCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGAATCAGGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGCACCATC---AACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTTTCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCACCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCAGCTCCCACTGGGGATGGTCACACAACCCAGGCCCCAACCACAGTACTGCAGGCGGCACCTAGCAGCCCTGACTCCACCCTGGCGCCCTCAGGAGGCGCATCACTTTCCATAACAGGTGCCCTT--CCTGG-------TGTAGTGTCAACACCAGGGGTCCCAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGAAACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAGAAACACAGACCAGTGAACCGGCCTCCTCAGGGTCGGGCACCACCTCAGAG i rheMac3.chrUn_JH291127 I 378 C 0 s papAnu2.chr2 187288997 1419 + 187378091 CAGAACCACCAGACTCAGAGCATAGAGACCACCAGAgtatctcaaa---------tcaacaccctcACACCGGTTACAACATCAACTGTTTTATCCTCACCAAGTGGATTCAACCCAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACGCA-------------------------------------TTCCTGGT-----------------------------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTGTAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAGCTTTCCACACCCAGCAGAGTGAA---GGTGCAGAGGCCA----TAGGATGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTCAT------------GAGACATTTCCTCCACATGAAACCAT----------AACATGGCCT--------------------TCCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCGGGGACAGCCGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGTGAATCAGGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAACGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAATACGGCCACATCCCCATCTTCTTCACCTATGCTGGATGGACACACATCACAACAAATTACA-ATGGCACCATC---AACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTTTCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCACCCTCAGAAATTGCTCCTCAGGACACACCTACCATAAGTGCAGCGACAACCTTGGCCCCAGCTCCCACTGGGGATGGTCACACAACCCAGGCCCCAACCACAGTACTGCAGGCCACACCCAGCAGCCCTGACTCCACCCTGGCGCCCTCAGGAGGCGCATCACTTTCCATAACAGGTGCCCTT--CCTGG-------TGTAGTGTCAACACCAGGGGTCCCAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAGAAACACAGACCAGTGAACCGGCCTCCTCAGGGTCGGGCACCACCTCAGAT i papAnu2.chr2 I 378 C 0 s chlSab2.chr15 91317453 1413 + 91754291 CAGAACCACCAGACTCAGAGCATAGAGACCACCAGAGTATCTCAAA---------TCAACACCCTCACACCGGTTACAACATCAACTGTTTTATCCTCACCAAGTGGATTCAACCCAAGTGGAACAGTTTCTCAGGAGACATTCCCTTCTGGTGAAACAACCACTTCATCCCCTTCCAGTGTCAGCAACACA-------------------------------------TTCCTGGT-----------------------------------------GACATCAGAGGTGTTCAGAA---TGCCCACCTCCAGAGACTCTACTCTTGGAAACACAGAGGAAATATCACTACCTATAAGGGGAACCATTTCTGCAATTACTTCTAGAGTTTCAACCATATGGTTGTCAGACACACTGTCAACAGCACTCTCCCCCAGTTCTTTACCTC---------CAAAAATATCCACAACTTTCCACACCCAGCAGAGCGAA---GGTGCAGAGACCA----TAGGACGGCCTCATGAGAGGAGTTCAGTCTCTCCAGGTGTGTCTCAT------------GAGACATTTCCTCCACATGAAACCAT----------AACATGGCCT--------------------TCCTCATTCTCCAGTGAAGACCGCACAACTCGCTCACCAAAAGAACTGCCCTCAACACCA-----------------------------------------------------------ACAGGTGCTGCC-ACTAGGCTTGTCACAGGAAGTCCAATAG---------------------TGCCAGGGACAGCTGGCACTATTCCAAGGGTCCCCTCTGAGGTCTCAACAATAGGGGATTCAAGACA--GCCCACCA-CACACCCCTCCCACAGCACAACTCTCCTGGAAACAACAGGGGCAGGTGCCCAGACACAATGGACACAAGAAACGGGGACCACTGGAGAGGTTCCTATCAACAGCCCAAGCTACAGTGTGACTCAGATGATAAAT------ACAACCCCATCTTCTTCACCTATGCTGAATGGACACACATCACAACAAATTACA-ATGGCACCATC---AACAAATCATTCAACAATACATTCCACAAACACCTCTCCTCAGGAATCACTGGCTGTTTCCCAGAGAGGTCACACTCAAGCCCCGCAGACCACACAAGAAT-CCCAAACCACAAGGTCCATCTCCCCTGTGACTGACA---CCAAGACAGTCACCACCCCAGGCTCTTCCTTCACAGCCAGTGGGCACTCATCCTCAGAAATTGCTCCTCAGGACGCACCTACCATAAGTGCAGCGACAACCTTTGCCCCAGCTCCCACTGGGGATGGTCACACAACCCAGGCCCCAACCACAGTACTGCAGGCGGCACCTAGCAGTCCTGACTCCACCCTGGCGCCCTCAGGAGGTGCATCACTTTCCATAACAGGCGCTCTT--CCTGG-------TGTAGTGTCAACACCAGGGGTCCTAGAAGGACGATGGACATCAGCCTCTGCCAGCACCT---CACCTGACACAGCAGCAGCCATGACCCAAACCCACCAGGCTGAAGGCACAGAGGCCTCTGGAGAAACACAGACCAGTGAACCGGCCTCCTCGGGGTCGGGCACCACCTCAGAG i chlSab2.chr15 I 4894 C 0 s calJac3.chr17 73791160 1413 + 74750902 CAGAACCAGCAGACTCAGAGCGTGGGGACCACCAGAGGACCTCAGA---------TCAACACCCTCACACTGGTT---GCATCAACTGTTTTATCCTCACCAAGTGGACTCACTCTGAGTGGAACAGTTTCTCAGGAGACACTCCCTTATGCTGAAACAACCACTTCGTCCCCTTCCAGTGTCAGCAGCGCA-------------------------------------TTCCTGGT-----------------------------------------AACATCAGAGGTGTCCCGAA---TGCCAACCTCCGCAGCTTCTACTCTTGGAAACACAGAGGAGACAGCGCGATCTGTAAGGGGAACGACTTCTGCCATCACTTCTCAAGTTTCAACCAGATGGTGGTCAGACACCCTGTCAACAGCACTCTCCCCGAGTTCTTTACCTC---------CAAAACTACCCCCAGCTTTCCACACCCACCCGAGTGAG---GGTGCAGAGACCA----CAGGACGGCCTCATGAAAGGAGCTCAGTCTCTCCAGGTGTGTCTCAT------------GAGACGTTTACTCCACATGAAAC-------------AACACTGACT-----------------------------TCCAGCGAAGGCCTCACAACTTGGTTACCAAAAGAGCTGCCCTCAACACCA-----------------------------------------------------------ACAAGTGTTGCC-ACTATGCTGGTCACAGGAAGTCCATCTA------------------------CGTGGACAACTGGCACTATTCCAGGAGTCCCTTCTGAGGTCTCAACAATAGGGGAACCAGGGCA--GCCCACCA-CACGCCCCTCCCATAGCACAGCTCTCCCAGAAACAACAGGGGCAAGTGCCCAGACACAATGGACACAAGAAATGGGGACCACTGGAGAGGTTCTTGTCCACAGCCCAAGATACAGTGTGACCCAGATGACAAAAGCAGCCACATCGCCCCCTTCCTCACCGATGCTGGATGGACACACACCACCACAAAGTACA-ACGGCACCGTC---AACATATCCTCCAACAACACACCCTGTGAGCACCTCTCCTCGGAGACCGTCGGCTGTTTCCCACAGAGGTCACACTCCAGCCTCGAAGACCACACGAGAAT-CCCAAACCACGAGGTCCGTCTCCCCCGTGACTGACAGCCTCAAGACAGCCACCACCCCAGCTTCTTCCTTCACAGCCAGCGGACACTCGCCCTCAGAAACTGTTCCTCAGGACGCATCCGCCGTCAGTGCAGCAACAACCTTCACCCCAGCCCCCTCCAGGGACGGTCACAGGCCCCAGGCCCCAGCCACAGCACCGCAGGCAGCACCCGGCAGCCCTGACGCCACCCTGGGGCCCTCAGGAGGCACATCGCTTTCCATCACAGGCACCATTCCTCCGGCCACCTCTGCGGTGTCAACACCAGTGGATGCAGAAGGACGATGGACATCAGCCTCTGCCAGCACGT---CACCCAGCACAGCACCCGCTATGACCCAACCCCACCAGGCTCGGGGCACAGAGGCCTCCGGAGAAACACAGACCAGCCAACCGGCCTCCTCAGGGTCAGGCCCCATCCCAGCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2288812 1440 - 31377067 CAGGGTCACTCCACCCAGACCATGGAGACCAGCACAGAGTCTGCAA---------CCAGCAGTGTCTCAGCGATGATCACATCCTCTCCCTCATCCTCCCGAAGTGAACACACACCTACAGATGACTCGACCCAGGACATGGCCTTGTCTGACACACCAGGTACTTCATCCCTTTCCAGTGTCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTGGTGACACCTCTTTGGTTCCCAGTGTAAGCAACACATCAGCAACGACATCAGAGGTCCCGACAACACCACCAATTGCAACAGACACCTCAGCAGGAACCACAAGGCACACGTCACTACCGGTAATGGGAAGTGTTACCCACATCAGCTCAACAGGCCTAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCTGGAGACAACAGAGTCATCTCAGGGTCACTCCACCCAGGCCATGGAGATCAGCACAGAGTCTGGAGCCAGCAGTGTCTCA-GCGATGATCACATCCTCTCC--------CTCATCCTCCCGAAGAGGAGACA-CTCCTACAGATGGCACGACCCAGGACATGGACACAGCCTTGTCTGACACACCAAGCAGTTCGTCCCCTTCCAGTGTCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCTTCCCCTGGGGACACCTCATCATCTTCCAGTGAAAGCAGCACATCACCAACAGTATCACAGGTCCTGACGACACTGATGGCAACAGACACCCCAGCAGGCACAACAAGGCACACGTCACCACCTGAAACGGGAAGTGTTACTCCA---GTCAGCTCAACAGGCTCAATGACAGGTGGACCAGGGGGACACTCACCAGCACACTCTTCCCTGACTTCTACT---CCAGAGACAACAGAGTCA---TCTCAGGGTTACACGACCCAGACCATGGAGACCAGCACAGAGTCTGCAACCAGCA--------------GTGTCTCAG-CGATGATCACATCCACTCCCTCATCCTCC---------CGAAGTGAACACACACC---------TACAGATGACTCAACCCAGGACATGGCCTTGTCTGACACAC----CAAGCACTTCATCCC---------------TTTCCAGTGTCAGCCACACACC--TTCCGCAG---TGACAGAAATACCCACACCA-----TCAGCCTCCCCTGGG---GACA------------------CTTCAAGATCTT---------CCAGTGGA-----------------------------------------------AGCAACA-----------------CATCACCAATG-----ACATCACAGGTCCCGACGACA------CTGATTGCATCAGACACCCCAG---------CAGGAACCACGGGACACACGTCACCACCTGAAACGGGAAGTGTTACACCAGTCAGCTCAACAGACTCAATGACAAGTGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGACAACAGC-GTCAT--CTCAGGGTCACTCCACCCAGACCATGGAGACT--------AGCACAGAGTCTACAACCAGC----------------AGTGTCTCAGCG i canFam3.chr33 C 0 I 537 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=158296.000000 s hg38.chr3_KI270937v1_alt 5556 197 + 165607 GGCACAGCTACCCCTTCCTCATCCGGGGCGAGTGGCACAACACCTTCAGGAAGCGAAGGAATATCCACCTCAGGAGAGACGACAAGGT----TTTCATCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTG--TCCGCCTCAGCCAGTCATGGT-G---------------CCATCCCAGTAAG---CACAGGAATGGCGTCTTC s rheMac3.chrUn_JH291127 55042 197 - 111706 GGCACAGCTACCCCTTCCTCATCCAGGGCGAGCAGCACAACACCTTCAGGAAGCGAAGGAATATCCATCACAGGAGAGACCACATGGT----TCTCGCCAAACCCCTCCAGGGACAGTAACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTCATGAT-G---------------CCACCCCAGTAAG---CACAGGAATGGTGTCTGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187290416 197 + 187378091 GGCACAGCTACCCCTTCCTCATCCAGGGCGAGCAGCACAACACCTTCAGGAAGCGAAGGAATATCTATCACAGGAGAGACCACATGGT----TCTCGCCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTCATGAT-G---------------CCACCCCAGTAAG---CACAGGAATGGTGTCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91318866 197 + 91754291 GGCACAGCTACCCTTTCCTCATCCAGGGCGAGCGGCACAACACCTTCAGGAAGCGAAGGAATATCCATCACAGGAGTGACCACATGGT----TCTCACCAAACCCCTCCAGGGACAGTCACACAACCCAGTCAACAACCGAATTGCTA--TCTGCCTCAGCCAGTCATGAT-G---------------CCACCCCAGTAAG---CACAGGAATGGTGTCTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73792573 212 + 74750902 GGCACAGCTACCCCTTCCTCATCCAGGACAAGTGGCACAACACCTTCAGGAAGCCACGGAATGTCCACCTCAGGGGAGACCACGCGGT----TCTCACCAAGACCCTCCAGGGACACTCACATCCCCCAGTCAACAAGCGAATTGCCG--TCCCCCTCAGCCAGTCCGGAC-GTCACTCGGGCAAGCACCATCCTGGCAAG---CATGGGAACGGGGTCCCC i calJac3.chr17 C 0 I 1048 s canFam3.chr33 2290789 197 - 31377067 GGCACACCAAGCACTTCATCGTCTTCTACTATCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCC-TGGTGACACCTCATCA---TCTTCCAGTGGAAGCAACACA------TCAGCAACGACATCACAGGTCCCGACGACACCGATTACAATAG---------------ACACCCCAGCAAGCACCACAGGACACACGTCACC i canFam3.chr33 I 537 C 0 e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=173377.000000 s hg38.chr3_KI270937v1_alt 5753 322 + 165607 GATCGTCCCCGGCACCTTTCATCCCA-CCCTCTCTGAGGCCTCCACTGCAGGGAGACCGACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACAGCCGCCATTTCCCGGATGGCCCA-GACTCAGAGGACAAGAACCAGCAGAGGGTCTGACACTATCAGCCTGGCGTCCCAGGCAACCGACACCTTCTCAACAGTCCCACCCACACCTCCATCGATCACATCCACTGGGCTTACATCTCCACAAACCGAGACCCACACTCTGTCACCTTCAGGGTCTGGTAAAACCTTCACCACGGCCCTCATCAGCAAC s rheMac3.chrUn_JH291127 55239 322 - 111706 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCTCCACTGCAGGGAGACCAACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCCGCCATTTCCCGGATGGCGCA-GACTGAGAAGACAGGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACTGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACACTCTGTCACCTTCAGGGTCTGGTACAACCTTCAACATGGCCCTTGTCAGCAAC i rheMac3.chrUn_JH291127 C 0 I 620 s papAnu2.chr2 187290613 322 + 187378091 GATTGTCCCCAGCACCTTTCCTGTCA-CTCTCTCTGAGGCCTCCACTGCACGGAGACCGACAGGACAGTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGATGGCCGCCATTTCCCGGATGGCGCA-GACTCAGAGGACAGGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGCGACTGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACACTCTGTCACCTTCAGGGTCTGGTACAACCTTCAACATGGCCCTCGTCAGCAAC i papAnu2.chr2 C 0 I 616 s chlSab2.chr15 91319063 322 + 91754291 GATTGTCCCCAGCACCTTTCCTGTCA-CCCTCTCTGAGGCCTCCACTGCAGGGAGACCGACAGGACACTCAAGCCCAACTTCTCCCAGTGCCTCTCCTCAGGAGACGGCTGCCATTTCCCAGATGGCGCA-GACTCAGAGGACAGGAACCAGCAGAGGGTCTGACACCATCAGCCTGGTGTCCCAGGTGACCGACACTTTCTCAACAGTCACACCCACACCTCCTTCGATCACATCCAGTGGGCTCACATTTCCACAAACCGAGACCCACGCTCTGTCACCTTCAGGGTCTGGTACAACCTTCAACATGGCCCTCATCAGCAAC i chlSab2.chr15 C 0 I 620 s canFam3.chr33 2290986 273 - 31377067 -ACCTGAAACGGGAAGTGTTATACCAGTTAGCTCAATAGGCTCAATGACAAGCGGACCAGGGGGACACTCAACAGCACACTCTTCCCTGACTTCTACTCCAGAGAAAACAGCATCATCTCAGG-GTCACATGACCCAGACCATGGAGACCAGCACAGAGTCTGCAACCAGCA-----GTGTCTCAG----------------CGATGATCACATCCA---CTCCCTCATCCTCCCGAAGTGAACACACACCTACAGATGACTCGACCCAGGACATG--GCCTT----GTCTGACACA-------------------CCAAGTAC i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e macFas5.chr2 192356323 5347 - 192460366 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=668.000000 s hg38.chr3_KI270937v1_alt 6075 26 + 165607 GCCACCCCTCTTCC-TGTCACCTACGC s canFam3.chr33 2291259 27 - 31377067 TTCATCCCTTTCCAGTGTCAGCCACAC i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187290935 616 + 187378091 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C e panTro4.chr3 2531151 3000 - 202329955 M a score=187.000000 s hg38.chr3_KI270937v1_alt 6101 9 + 165607 ---TTCCTCGGC s panTro4.chr3 2534219 9 - 202329955 ---TTCCTCAGT i panTro4.chr3 M 3000 C 0 s canFam3.chr33 2291286 9 - 31377067 ACCTTCCGC--- i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187290935 616 + 187378091 I e macFas5.chr2 192356323 5347 - 192460366 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=5244.000000 s hg38.chr3_KI270937v1_alt 6110 33 + 165607 ATCCACAGG-----TCACACCACCCCTCTTCATGTCAC s panTro4.chr3 2534228 33 - 202329955 ATCCACAGG-----TGACACCACCCCTCTTCCTGTCAC i panTro4.chr3 C 0 T 97 s macFas5.chr2 192361670 33 - 192460366 ATTCACAGG-----TCACGCTACCACTCTTCCTGTCAC i macFas5.chr2 I 5347 C 0 s canFam3.chr33 2291295 22 - 31377067 AGTGACAGAAATACCCACACCA---------------- i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187290935 616 + 187378091 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=3084.000000 s hg38.chr3_KI270937v1_alt 6143 14 + 165607 CGATGCTTCCTCAG s panTro4.chr3 2534164 14 - 202329955 CGACGCTTCCTCAG i panTro4.chr3 T 97 C 0 s macFas5.chr2 192361703 14 - 192460366 GGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 s canFam3.chr33 2291317 4 - 31377067 ----------TCAG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187290935 616 + 187378091 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=18003.000000 s hg38.chr3_KI270937v1_alt 6157 57 + 165607 TATCCACAGGTCACGCCACCC-CTCTTCCTGT--CACCAGCC-CTTCCTCAGTATC--CACAG s panTro4.chr3 2534178 58 - 202329955 TATCCACAGGTGACACCACCT-CTCTTCCTGT--CTTTTGACACTTCCTCAGTATC--CACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCA-CTCTTCCTGT--CACGGGTG-CTTTCTCAGCATC--CACAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCC-CTCTTGCCGT--CAGCAGCG-CATCCTCAGCATC--CACAG i papAnu2.chr2 I 616 T 56 s canFam3.chr33 2291321 62 - 31377067 CCTCCCCTGGGGACACTTCAAGATCTTCCAGTGGAAGCAACA-CATCACCAATGACATCACAG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=11183.000000 s hg38.chr3_KI270937v1_alt 6214 48 + 165607 GTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGAATCCACAG s panTro4.chr3 2534236 48 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGAAGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s canFam3.chr33 2291383 46 - 31377067 GTCCCGACGACACTGATTGCATCA--GACACCCCAGCAGGAACCACGG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=4015.000000 s hg38.chr3_KI270937v1_alt 6262 11 + 165607 --GTCACGTCACC s panTro4.chr3 2534284 11 - 202329955 --GTCACGCCACC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 11 - 192460366 --GTCACGCTACC i macFas5.chr2 T 48 C 0 s canFam3.chr33 2291429 13 - 31377067 GACACACGTCACC i canFam3.chr33 C 0 T 917 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=4917.000000 s hg38.chr3_KI270937v1_alt 6273 37 + 165607 CCTCTTCC------------TGTCACCAGCTTTTCCTCAGCATCCACAG------ s panTro4.chr3 2534295 37 - 202329955 CCTCTTCC------------TGTCACCGACGCTTCTTCAATATCCACAG------ i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361689 37 - 192460366 ACTCTTCC------------TGTCACGGGTGCTTTCTCAGCATCCACAG------ i macFas5.chr2 C 0 T 56 s canFam3.chr33 2290525 55 - 31377067 TCACTACCGGAAATGGGAAGTGTTACCCACATCAGCTCAACAGGCCTAATGACAA i canFam3.chr33 T 917 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=1173.000000 s hg38.chr3_KI270937v1_alt 6310 38 + 165607 GTGA-----------------CAGCACCCCTCTTCCTGTCACTGACACTTC-----------------CTCA s panTro4.chr3 2534332 38 - 202329955 GTCA-----------------CGCCACCCCTCTTCCGGTCACCGACACTTC-----------------CTCA i panTro4.chr3 C 0 C 0 s canFam3.chr33 2290580 70 - 31377067 GTGGACCAGGGGGACACTCACCAGCACACTCTTCCCTG--ACTTCTACTCCAGAGACAACAGAGTCATCTCA i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2775564 0 - 123690457 C a score=-742.000000 s hg38.chr3_KI270937v1_alt 6348 2 + 165607 -GC s panTro4.chr3 2534370 2 - 202329955 -GT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775564 2 - 123690457 -gc i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2290650 2 - 31377067 GG- i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=23625.000000 s hg38.chr3_KI270937v1_alt 6350 56 + 165607 ----ATCCA--CAGGTCACG----TCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG s panTro4.chr3 2534372 56 - 202329955 ----ATCCA--CAGGTGACG----CCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775566 56 - 123690457 ----ATCCA--CAGGTCACA----CCACCTCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ----ATTCA--CAGGTCACG----CTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 s canFam3.chr33 2290652 59 - 31377067 GTCACTCCACCCAGGCCATGGAGATCAGCACAGAGTCTGCAACCAGCAGTGTCTCAGCG------- i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=9887.000000 s hg38.chr3_KI270937v1_alt 6406 40 + 165607 ---GTGACACCACCCCTCTTCCTGTCACT-------GACACTTCCTCAGC s panTro4.chr3 2534428 40 - 202329955 ---GTGACACCACCTCTCTTCCTGTCACC-------GACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775622 40 - 123690457 ---GTCACACCACCTCTCCTCCTGTCACT-------GACACATCCTCAGC i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2290711 50 - 31377067 ATGATCACATCCTCTCCCTCATCCTCCCGAAGAGGAGACACTCCTACAGA i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=22127.000000 s hg38.chr3_KI270937v1_alt 6446 47 + 165607 ATCCACAGGTCACGCCACCTCTCTTCCTGTCA---CCGACACTTCCTCAG s panTro4.chr3 2534468 47 - 202329955 ATCCACAGGTCACGCCACCTCTCTTCCTGTCA---CCGACACTTCCTCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775662 47 - 123690457 ATCCACAGGTCACACCACCTCTCCTCCTGTCA---CCAGCACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 47 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCA---CGGGTGCTTTCTCAG i macFas5.chr2 T 56 T 48 s canFam3.chr33 2290761 50 - 31377067 TGGTACAACCCAGGACACAGCCATGTCTGGCACACCAAGCACTTCATCGT i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=27054.000000 s hg38.chr3_KI270937v1_alt 6493 57 + 165607 TATCCACAGGTCACACCACCCCTCTTCCTGTCACCGA------CACTTCCTCAGCATCCACAG s panTro4.chr3 2534515 57 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGA------CGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775709 57 - 123690457 CATCCACAGGTCACACCACCTCTCTTCCTGTCACTGA------CACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGG------TGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s canFam3.chr33 2290811 63 - 31377067 CTTCTACTATCAGCCACACACCTTCCGCAGTGACAGAAATACCCACACCATCAGCCTCCCCTG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=16957.000000 s hg38.chr3_KI270937v1_alt 6550 39 + 165607 GTCACGCCACCTC-TCTTCC--TGTCACCGACACTTCCTCAG s panTro4.chr3 2534572 39 - 202329955 GTCACGCCACCCC-TCTTCC--TGTCACCGACGCTTCCTCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775766 39 - 123690457 GTCACACCAGTTC-TCTTCC--TGCCACTGACACGTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCAC-TCTTCC--TGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 s canFam3.chr33 2290874 42 - 31377067 GTGACACCTCATCATCTTCCAGTGGAAGCAACACATCAGCAA i canFam3.chr33 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=6964.000000 s hg38.chr3_KI270937v1_alt 6589 12 + 165607 ---TATCCACAGGTC s panTro4.chr3 2534611 12 - 202329955 ---TATCCACAGGTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775805 12 - 123690457 ---CATCCACAGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 12 - 192460366 ---TATTCACAGGTC i macFas5.chr2 T 48 C 0 s canFam3.chr33 2290916 14 - 31377067 CGACAT-CACAGGTC i canFam3.chr33 C 0 I 1063 e calJac3.chr17 73792785 1048 + 74750902 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=20579.000000 s hg38.chr3_KI270937v1_alt 6601 45 + 165607 ACACCACCCCTCTTCATGTCACTGATGCTTCCTCAGCATCCACAG s panTro4.chr3 2534623 45 - 202329955 ACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775817 45 - 123690457 ACACCACCTCTCTTCCTGTCACCAGCGCTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361681 45 - 192460366 ACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=19728.000000 s hg38.chr3_KI270937v1_alt 6646 88 + 165607 GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2534668 88 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775862 88 - 123690457 GTCACACCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAGGTCACACCACCCCTCTTCCTGTCAGTGACACTTCCTCAGC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=25040.000000 s hg38.chr3_KI270937v1_alt 6734 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCTTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2534756 56 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2775950 56 - 123690457 ATCCACAGGTCACACCACCTCTCTTCCTGTCATCAGCACTTCCTCAACATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=12444.000000 s hg38.chr3_KI270937v1_alt 6790 25 + 165607 GACACGCCACCCCTCTTCCTGTCAC s panTro4.chr3 2534812 25 - 202329955 GTCACGCCACCCCTCTTCCTGTCAC i panTro4.chr3 C 0 T 673 s nomLeu3.chr11 2776006 25 - 123690457 GTCACACCACCCCTCTTCCTGTCAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 25 - 192460366 GTCACGCTACCACTCTTCCTGTCAC i macFas5.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=9329.000000 s hg38.chr3_KI270937v1_alt 6815 23 + 165607 CGACGCTTCCTCAGTGTCCACAG s panTro4.chr3 2534164 23 - 202329955 CGACGCTTCCTCAGTATCCACAG i panTro4.chr3 T 673 C 0 s nomLeu3.chr11 2776031 23 - 123690457 TGACACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361703 23 - 192460366 GGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=5130.000000 s hg38.chr3_KI270937v1_alt 6838 22 + 165607 ATCACGCCACCTCTCTTCCTGT s panTro4.chr3 2534187 22 - 202329955 GTGACACCACCTCTCTTCCTGT i panTro4.chr3 C 0 I 673 s nomLeu3.chr11 2776054 22 - 123690457 GTCACACCACCTCTCCTCCTGT i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=2494.000000 s hg38.chr3_KI270937v1_alt 6860 18 + 165607 AACCATCCCTTCCGCAGC s panTro4.chr3 2534882 18 - 202329955 CACCGACGCTTCCTCAGT i panTro4.chr3 I 673 C 0 s nomLeu3.chr11 2776076 18 - 123690457 CACCAGCACTTCCTCAAC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=25935.000000 s hg38.chr3_KI270937v1_alt 6878 56 + 165607 ATCCACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2534900 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2776094 56 - 123690457 ATCCACAGGTCACACCACCCCTCTTCCTGTCACTGACACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=11110.000000 s hg38.chr3_KI270937v1_alt 6934 50 + 165607 GTCAGGCCACCTCTCTTCTTGTCACCGACACTTCCTCAGTATCCACAGGT s panTro4.chr3 2534956 50 - 202329955 GTGACACCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCAGAGGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2776150 50 - 123690457 GTCACACCACCCCTCTTCCTGTCACTGACACGTCCTCAGCATCCACAGGT i nomLeu3.chr11 C 0 M 3534 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=6292.000000 s hg38.chr3_KI270937v1_alt 6984 86 + 165607 GACACCACGCCTCTTCCTGTCACTAGCACTTCCTCAGCATCCACAGGTCACGTCACTCCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2535006 86 - 202329955 GACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGAGATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=21324.000000 s hg38.chr3_KI270937v1_alt 7070 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG s panTro4.chr3 2535092 56 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAGCG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 57 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 56 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7739.000000 s hg38.chr3_KI270937v1_alt 7126 87 + 165607 GTGACACCATGCCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535148 87 - 202329955 GTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12769.000000 s hg38.chr3_KI270937v1_alt 7213 57 + 165607 TATCCACAGGTCACACCACCCCTCTTCATGTCACTGATGCTTCCTCAGCATCCACAG s panTro4.chr3 2535235 57 - 202329955 TATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7042.000000 s hg38.chr3_KI270937v1_alt 7270 88 + 165607 GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535292 88 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13241.000000 s hg38.chr3_KI270937v1_alt 7358 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCTTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535380 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10107.000000 s hg38.chr3_KI270937v1_alt 7414 48 + 165607 GACACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro4.chr3 2535436 48 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2005.000000 s hg38.chr3_KI270937v1_alt 7462 40 + 165607 ATCACGCCACCTCTCTTCCTGTAACCATCCCTTCCGCAGC s panTro4.chr3 2535484 40 - 202329955 GTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12651.000000 s hg38.chr3_KI270937v1_alt 7502 56 + 165607 ATCCACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535524 56 - 202329955 ATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9339.000000 s hg38.chr3_KI270937v1_alt 7558 136 + 165607 GTCAGGCCACCTCTCTTCTTGTCACCGACACTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCACTTCCTCAGCATCCACAGGTCACGTCACTCCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2535580 136 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=24607.000000 s hg38.chr3_KI270937v1_alt 7694 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG s panTro4.chr3 2535716 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 57 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 56 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6034.000000 s hg38.chr3_KI270937v1_alt 7750 87 + 165607 GTGACACCATGCCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535772 87 - 202329955 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=11358.000000 s hg38.chr3_KI270937v1_alt 7837 26 + 165607 TATCCACAGGTCACACCACCCCTCTT s panTro4.chr3 2535859 26 - 202329955 TACCCACAGGTGACACCACCCCTCTT i panTro4.chr3 C 0 T 1200 s macFas5.chr2 192361669 26 - 192460366 TATTCACAGGTCACGCTACCACTCTT i macFas5.chr2 T 57 C 0 s papAnu2.chr2 187291551 26 + 187378091 TACTCACAGGTCATGCCACCCCTCTT i papAnu2.chr2 T 57 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=11800.000000 s hg38.chr3_KI270937v1_alt 7863 31 + 165607 CCTGTCACCAGCCCTTCCTCAGCATCTACAG s panTro4.chr3 2534685 31 - 202329955 CCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 T 1200 C 0 s macFas5.chr2 192361695 31 - 192460366 CCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291577 31 + 187378091 GCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4277.000000 s hg38.chr3_KI270937v1_alt 7894 18 + 165607 GTCACACCACCCCTCTTC s panTro4.chr3 2534716 18 - 202329955 GTCACACCACCCCTCTTC i panTro4.chr3 C 0 I 1151 s macFas5.chr2 192361678 18 - 192460366 GTCACGCTACCACTCTTC i macFas5.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6497.000000 s hg38.chr3_KI270937v1_alt 7912 30 + 165607 CTGTCACCGACACTTCCTCAGCATCCAAAG s panTro4.chr3 2535885 30 - 202329955 CTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 I 1151 C 0 s macFas5.chr2 192361696 30 - 192460366 CTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3426.000000 s hg38.chr3_KI270937v1_alt 7942 40 + 165607 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2535915 40 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10491.000000 s hg38.chr3_KI270937v1_alt 7982 56 + 165607 ATCTACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCC-ACAG s panTro4.chr3 2535955 57 - 202329955 ATCCACAGGTGACAACACCCCCTCTTCTGTCACCGACGCTTCCTCAGCATCCAACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCC-ACAG i macFas5.chr2 T 56 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1589.000000 s hg38.chr3_KI270937v1_alt 8038 22 + 165607 GTGACACCACCCCTCTTCCTGT s panTro4.chr3 2536012 21 - 202329955 GTGACA-CACCCCTCTTCCTGT i panTro4.chr3 C 0 T 1151 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1170.000000 s hg38.chr3_KI270937v1_alt 8060 17 + 165607 CACCAATGCTTCCTCAT s panTro4.chr3 2534882 17 - 202329955 CACCGACGCTTCCTCAG i panTro4.chr3 T 1151 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=19927.000000 s hg38.chr3_KI270937v1_alt 8077 49 + 165607 TATCCACAGGTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2534899 49 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 49 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 57 T 48 s papAnu2.chr2 187291551 49 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGC i papAnu2.chr2 T 57 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=21692.000000 s hg38.chr3_KI270937v1_alt 8126 54 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCAC s panTro4.chr3 2534948 54 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 54 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 48 T 54 s papAnu2.chr2 187291552 54 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCAC i papAnu2.chr2 T 48 T 54 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13256.000000 s hg38.chr3_KI270937v1_alt 8180 186 + 165607 CGGTCACGCCACCCCTCTTCCTGTCACCGGCCTTTCCTCAGCTACCACAGATGACACCACCCGTCTTCCTGTCACCGACGTTTCCTCGGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535002 186 - 202329955 AGGTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGAGATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAGCGGTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e macFas5.chr2 192361724 54 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6338.000000 s hg38.chr3_KI270937v1_alt 8366 31 + 165607 ATCCACAGGTCACGCCAGCCCTCTTCTTGTC s panTro4.chr3 2535188 31 - 202329955 ATCCACAGGTGACATCACCCCTCTTCCTGTC i panTro4.chr3 C 0 I 814 s macFas5.chr2 192361670 31 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTC i macFas5.chr2 T 54 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5501.000000 s hg38.chr3_KI270937v1_alt 8397 25 + 165607 ACTGACGCTTCCTCAGCATCCACAG s panTro4.chr3 2536033 25 - 202329955 ACGGATACTTCCTCAGTATCCACAG i panTro4.chr3 I 814 C 0 s macFas5.chr2 192361701 25 - 192460366 ACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3802.000000 s hg38.chr3_KI270937v1_alt 8422 22 + 165607 GTCAGGCCACCCCTCTTCCTGT s panTro4.chr3 2536058 21 - 202329955 GT-AAGCCACTCCTCTTCCTGT i panTro4.chr3 C 0 T 813 s macFas5.chr2 192361678 22 - 192460366 GTCACGCTACCACTCTTCCTGT i macFas5.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5779.000000 s hg38.chr3_KI270937v1_alt 8444 26 + 165607 CACCGACACTTCCTCAGTATCCACAG s panTro4.chr3 2535266 26 - 202329955 CACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 T 813 C 0 s macFas5.chr2 192361700 26 - 192460366 CACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 76 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6464.000000 s hg38.chr3_KI270937v1_alt 8470 88 + 165607 CTCACGCCACCCCACTTCCTGTCACCGGCCTTTCTTCAGCTTCCACAGATGACACCACCCGTCTTCCTGTCACCGACGTTTCCTCGGC s panTro4.chr3 2535292 88 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 54 + 187378091 T e macFas5.chr2 192361726 76 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=11958.000000 s hg38.chr3_KI270937v1_alt 8558 56 + 165607 ATCCACAGGTCAGGCCATCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG s panTro4.chr3 2535380 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 54 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 76 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=5340.000000 s hg38.chr3_KI270937v1_alt 8614 58 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAGGTGACACCAC s panTro4.chr3 2535436 58 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAGGTGACACCAC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 76 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2088.000000 s hg38.chr3_KI270937v1_alt 8672 10 + 165607 CTCTCTTCCT s panTro4.chr3 2535494 10 - 202329955 CCCTCTTTCT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361650 10 - 192460366 CTTTCTTTCT i macFas5.chr2 T 76 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=100.000000 s hg38.chr3_KI270937v1_alt 8682 1 + 165607 G s panTro4.chr3 2535504 1 - 202329955 G i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361660 0 - 192460366 C e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1113.000000 s hg38.chr3_KI270937v1_alt 8683 9 + 165607 TCACCATCC s panTro4.chr3 2535505 9 - 202329955 TCACCGACG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361660 9 - 192460366 CCACCACCC i macFas5.chr2 C 0 I 1 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=833.000000 s hg38.chr3_KI270937v1_alt 8692 10 + 165607 CTTCCTCAGC s panTro4.chr3 2535514 10 - 202329955 CTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361669 1 - 192460366 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10006.000000 s hg38.chr3_KI270937v1_alt 8702 47 + 165607 ATCTTCAGGTCACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535524 47 - 202329955 ATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 47 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 I 1 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12152.000000 s hg38.chr3_KI270937v1_alt 8749 57 + 165607 TGTCCACAGGTCACGCCACCTCTCTTCTTGTCACCGACGCTTCCTCAGTATCCACAG s panTro4.chr3 2535571 57 - 202329955 TATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6791.000000 s hg38.chr3_KI270937v1_alt 8806 87 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTAACTCAGCATCCACAGGTGACACCACCCCTCTTCATGTCACCGACGCTTCCTCAG s panTro4.chr3 2535628 87 - 202329955 GTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15942.000000 s hg38.chr3_KI270937v1_alt 8893 39 + 165607 TATCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCC s panTro4.chr3 2535715 39 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCC i panTro4.chr3 C 0 T 1440 s macFas5.chr2 192361669 39 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 187291551 39 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCG i papAnu2.chr2 T 57 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7761.000000 s hg38.chr3_KI270937v1_alt 8932 18 + 165607 TTTCCTCAGCATCCACAG s panTro4.chr3 2534314 18 - 202329955 CTTCTTCAATATCCACAG i panTro4.chr3 T 1440 C 0 s macFas5.chr2 192361708 18 - 192460366 CTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 51 s papAnu2.chr2 187291590 18 + 187378091 CATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2618.000000 s hg38.chr3_KI270937v1_alt 8950 45 + 165607 GTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGCATCCT s panTro4.chr3 2534332 45 - 202329955 GTCACGCCACCCCTCTTCCGGTCACCGACACTTCCTCAGTATCCA i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 51 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6578.000000 s hg38.chr3_KI270937v1_alt 8995 29 + 165607 CAGGTCACACCACCCCTCTTCCTGTCACC s panTro4.chr3 2534377 29 - 202329955 CAGGTGACGCCACCCCTCTTCCTGTCACC i panTro4.chr3 C 0 T 192 s macFas5.chr2 192361675 29 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCACG i macFas5.chr2 T 51 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2735.000000 s hg38.chr3_KI270937v1_alt 9024 13 + 165607 GACGCTTCCTCAG s panTro4.chr3 2534214 13 - 202329955 GACACTTCCTCAG i panTro4.chr3 T 192 C 0 s macFas5.chr2 192361704 13 - 192460366 GGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=23069.000000 s hg38.chr3_KI270937v1_alt 9037 57 + 165607 TACCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro4.chr3 2534227 57 - 202329955 TATCCACAGGTGACACCACCCCTCTTCCTGTCACCGAAGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 57 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10967.000000 s hg38.chr3_KI270937v1_alt 9094 48 + 165607 GTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro4.chr3 2534284 48 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCGACGCTTCTTCAATATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=17198.000000 s hg38.chr3_KI270937v1_alt 9142 232 + 165607 GTCATGCCACCCCTCTTCCGGTCACCGACACTTCCTCAGTATCTACAGGACAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACTGGTGACACCACGCCGCTTCCTGTCACCGATACTTCCTCAGCATCCACAGGTCAGGACACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAACCCTTCCTCAGC s panTro4.chr3 2534332 232 - 202329955 GTCACGCCACCCCTCTTCCGGTCACCGACACTTCCTCAGTATCCACAGGTGACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10920.000000 s hg38.chr3_KI270937v1_alt 9374 47 + 165607 ATCCACAGGTCACGCCACCCCTCTTCTTGTCACCGACGCTTCCTCAA s panTro4.chr3 2534564 47 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 47 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 56 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13037.000000 s hg38.chr3_KI270937v1_alt 9421 57 + 165607 TATCCACAGGTCACGCCACCTCTCTTCTTGTCACCGACGCTTCCTCAGTATCCACAG s panTro4.chr3 2534611 57 - 202329955 TATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9588.000000 s hg38.chr3_KI270937v1_alt 9478 48 + 165607 GTCACGCCACCGCTCTTCATGACACCGATGCTTCCTCATTATCCACAG s panTro4.chr3 2534668 48 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7256.000000 s hg38.chr3_KI270937v1_alt 9526 87 + 165607 GGGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAACATCCACAGGTGACACCACCCCTCTTCCTGTCACCGAAACTTCCTCAG s panTro4.chr3 2534716 87 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATACTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=24603.000000 s hg38.chr3_KI270937v1_alt 9613 57 + 165607 TATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2534803 57 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAACCCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 48 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 57 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=8622.000000 s hg38.chr3_KI270937v1_alt 9670 40 + 165607 GTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2534860 40 - 202329955 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 40 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3825.000000 s hg38.chr3_KI270937v1_alt 9710 8 + 165607 ATCCACAG s panTro4.chr3 2534900 8 - 202329955 ATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361718 8 - 192460366 ATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291552 8 + 187378091 ACTCACAG i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=15806.000000 s hg38.chr3_KI270937v1_alt 9718 40 + 165607 GTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2534908 40 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 40 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291560 40 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGC i papAnu2.chr2 C 0 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3825.000000 s hg38.chr3_KI270937v1_alt 9758 8 + 165607 ATCCACAG s panTro4.chr3 2534948 8 - 202329955 ATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361718 8 - 192460366 ATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291552 8 + 187378091 ACTCACAG i papAnu2.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=14318.000000 s hg38.chr3_KI270937v1_alt 9766 40 + 165607 GTCAGGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2534956 40 - 202329955 GTGACACCACCCCTCTTCCTGTCACCAACACTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 40 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291560 40 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGC i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3516.000000 s hg38.chr3_KI270937v1_alt 9806 8 + 165607 ATCCACAG s panTro4.chr3 2534996 8 - 202329955 ATCCAGAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 8 - 192460366 ATTCACAG i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291600 8 + 187378091 ATCCACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9357.000000 s hg38.chr3_KI270937v1_alt 9814 48 + 165607 GTCACGCCATCCCTCTTCTTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535004 48 - 202329955 GTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6831.000000 s hg38.chr3_KI270937v1_alt 9862 87 + 165607 GACAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535052 87 - 202329955 GTGAGATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10780.000000 s hg38.chr3_KI270937v1_alt 9949 57 + 165607 TGTCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAG s panTro4.chr3 2535139 57 - 202329955 TATCCAGCGGTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2863.000000 s hg38.chr3_KI270937v1_alt 10006 40 + 165607 GTGACACCACTCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535196 40 - 202329955 GTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=18707.000000 s hg38.chr3_KI270937v1_alt 10046 48 + 165607 ATCCACAGGTCACGCCACCCCTCTTCATGTCACCGACGCTTCCTCAGC s panTro4.chr3 2535236 48 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 48 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 56 C 0 s papAnu2.chr2 187291552 48 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGC i papAnu2.chr2 T 56 T 48 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3825.000000 s hg38.chr3_KI270937v1_alt 10094 8 + 165607 ATCCACAG s panTro4.chr3 2535284 8 - 202329955 ATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361718 8 - 192460366 ATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291552 8 + 187378091 ACTCACAG i papAnu2.chr2 T 48 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=20529.000000 s hg38.chr3_KI270937v1_alt 10102 48 + 165607 GTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGCATCCACAG s panTro4.chr3 2535292 48 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s papAnu2.chr2 187291560 48 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2769.000000 s hg38.chr3_KI270937v1_alt 10150 40 + 165607 GTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535340 40 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=13075.000000 s hg38.chr3_KI270937v1_alt 10190 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCATGTCACCGACGCTTCCTCAGTATCCACAG s panTro4.chr3 2535380 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 51 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3404.000000 s hg38.chr3_KI270937v1_alt 10246 45 + 165607 GTGACACCACCCCTCTTCCTGTCACCAGCTCTTCCTCAGCATCCT s panTro4.chr3 2535436 45 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCA i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 51 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=11634.000000 s hg38.chr3_KI270937v1_alt 10291 51 + 165607 CAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGCATCCACAG s panTro4.chr3 2535481 51 - 202329955 CAGGTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361675 51 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 51 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=3472.000000 s hg38.chr3_KI270937v1_alt 10342 40 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2535532 40 - 202329955 GTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=4597.000000 s hg38.chr3_KI270937v1_alt 10382 20 + 165607 ATCCACAGGTCACGCCACCC s panTro4.chr3 2535572 20 - 202329955 ATCCACAGGTCACACCACCC i panTro4.chr3 C 0 T 288 s macFas5.chr2 192361670 20 - 192460366 ATTCACAGGTCACGCTACCA i macFas5.chr2 T 56 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=7356.000000 s hg38.chr3_KI270937v1_alt 10402 36 + 165607 ATCTTCCTGTCACCGGCCTTTCCTCAGCTTCCACAG s panTro4.chr3 2535304 36 - 202329955 CTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panTro4.chr3 T 288 C 0 s macFas5.chr2 192361690 36 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=2994.000000 s hg38.chr3_KI270937v1_alt 10438 40 + 165607 GTGACACCACCCGTCTTCCTGTCACCAACGTTTCCTCGGC s panTro4.chr3 2535340 40 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=546.000000 s hg38.chr3_KI270937v1_alt 10478 1 + 165607 A s panTro4.chr3 2535380 1 - 202329955 A i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 56 C 0 s papAnu2.chr2 187291552 1 + 187378091 A i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73792785 1048 + 74750902 I e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=37639.000000 s hg38.chr3_KI270937v1_alt 10479 55 + 165607 TCCACAGGTCATGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro4.chr3 2535381 55 - 202329955 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s papAnu2.chr2 187291553 55 + 187378091 CTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 56 s calJac3.chr17 73793833 55 + 74750902 TCCACAGGCCACGCGGCCCCTCTTGCTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 I 1048 T 55 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=21132.000000 s hg38.chr3_KI270937v1_alt 10534 280 + 165607 GTGACACCACCCCTCTTCCTGGCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCTTGTCACCGACGCTTCGTCAGTATCCACAGGTGACACCACCCGTCTTCCTGTCACCAGCCCTTCCTCAGCATCTACAGGTCACACCACCCCTCTACCTGTCACCGACACTCCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCAATGCTTCCTCATTATCCACACGTCACGCCACCTCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2535436 280 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAGGTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGTATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10371.000000 s hg38.chr3_KI270937v1_alt 10814 48 + 165607 ATCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCGCAGC s panTro4.chr3 2535716 48 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 48 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 56 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=546.000000 s hg38.chr3_KI270937v1_alt 10862 1 + 165607 A s panTro4.chr3 2535764 1 - 202329955 A i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291552 1 + 187378091 A i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=37072.000000 s hg38.chr3_KI270937v1_alt 10863 55 + 165607 TCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro4.chr3 2535765 55 - 202329955 TCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361671 55 - 192460366 TTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s papAnu2.chr2 187291553 55 + 187378091 CTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 56 s calJac3.chr17 73793833 55 + 74750902 TCCACAGGCCACGCGGCCCCTCTTGCTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 T 55 T 55 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9338.000000 s hg38.chr3_KI270937v1_alt 10918 136 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTACTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535820 135 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTACCCACAGGTGACACCACCCCTCTT-CTGTCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=9034.000000 s hg38.chr3_KI270937v1_alt 11054 53 + 165607 ATCCACAGGTCACGCCA-CTCCTCTTCTTGTCACCGACGCTTCCTCAGCATCCA s panTro4.chr3 2535955 53 - 202329955 ATCCACAGGTGACAACACCCCCTCTTC-TGTCACCGACGCTTCCTCAGCATCCA i panTro4.chr3 C 0 T 575 s papAnu2.chr2 187291552 53 + 187378091 ACTCACAGGTCATGCCA-CCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCA i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=873.000000 s hg38.chr3_KI270937v1_alt 11107 3 + 165607 CAG s panTro4.chr3 2535433 3 - 202329955 CAG i panTro4.chr3 T 575 C 0 s papAnu2.chr2 187291605 3 + 187378091 CAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=6086.000000 s hg38.chr3_KI270937v1_alt 11110 88 + 165607 GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535436 88 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAGGTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=12101.000000 s hg38.chr3_KI270937v1_alt 11198 56 + 165607 ATCCACCGGTCATGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535524 56 - 202329955 ATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 57 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=10578.000000 s hg38.chr3_KI270937v1_alt 11254 136 + 165607 GTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATACACAGGTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCATCATCCACAGGTGACACCACCCCTCTTCTTGTCACCGAGACTTCCTCAGT s panTro4.chr3 2535580 136 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2776200 3534 - 123690457 M a score=1146.000000 s hg38.chr3_KI270937v1_alt 11390 4 + 165607 ATCC s panTro4.chr3 2535716 4 - 202329955 ATCC i panTro4.chr3 C 0 I 288 s nomLeu3.chr11 2779758 4 - 123690457 ATCC i nomLeu3.chr11 M 3534 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=8229.000000 s hg38.chr3_KI270937v1_alt 11394 44 + 165607 ACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2536008 42 - 202329955 ACAGGTGACA-CACCCCTCTTCCTGT-ACGGATACTTCCTCAGT i panTro4.chr3 I 288 C 0 s nomLeu3.chr11 2779762 44 - 123690457 ACAGGTCACACCACCTCTCTTCCTGTCACTGATGCTTCCTCAGA i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=11615.000000 s hg38.chr3_KI270937v1_alt 11438 30 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGT s panTro4.chr3 2536050 29 - 202329955 ATCCACAGGT-AAGCCACTCCTCTTCCTGT i panTro4.chr3 C 0 T 285 s nomLeu3.chr11 2779806 30 - 123690457 ATCCACAGGCCACCCCACCCCTCTTCCTGT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187291552 30 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGT i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=6734.000000 s hg38.chr3_KI270937v1_alt 11468 17 + 165607 CACCAACACTTCCTCAG s panTro4.chr3 2535794 17 - 202329955 CACCGACGCTTCCTCAG i panTro4.chr3 T 285 C 0 s nomLeu3.chr11 2779836 17 - 123690457 CACTGACACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187291582 17 + 187378091 CAGCAGCGCATCCTCAG i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=7303.000000 s hg38.chr3_KI270937v1_alt 11485 9 + 165607 TATCCACAG s panTro4.chr3 2535811 9 - 202329955 TATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2779853 9 - 123690457 CATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 9 - 192460366 TATTCACAG i macFas5.chr2 T 57 C 0 s papAnu2.chr2 187291599 9 + 187378091 CATCCACAG i papAnu2.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=34630.000000 s hg38.chr3_KI270937v1_alt 11494 48 + 165607 GTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCATCCACAG s panTro4.chr3 2535820 48 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTACCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2779862 48 - 123690457 GTCACATCACCCCTCTTCCTGTCACCAGCGCTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291560 48 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 48 T 53 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=7082.000000 s hg38.chr3_KI270937v1_alt 11542 17 + 165607 GTCACACCACCCCTCTT s panTro4.chr3 2535868 17 - 202329955 GTGACACCACCCCTCTT i panTro4.chr3 C 0 T 1152 s nomLeu3.chr11 2779910 17 - 123690457 GTCACACCACTTCTCTT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 17 - 192460366 GTCACGCTACCACTCTT i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=8458.000000 s hg38.chr3_KI270937v1_alt 11559 22 + 165607 CCTGTCACCGACGCTTCGTCAG s panTro4.chr3 2534733 22 - 202329955 CCTGTCACCATCTCTTCCTCAG i panTro4.chr3 T 1152 C 0 s nomLeu3.chr11 2779927 22 - 123690457 CCTGTCACCAGTGCTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361695 22 - 192460366 CCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=24359.000000 s hg38.chr3_KI270937v1_alt 11581 57 + 165607 TGTCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTGTTCACAG s panTro4.chr3 2534755 57 - 202329955 CATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2779949 57 - 123690457 CATCCACAGGTCACATCACTTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 66 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=5325.000000 s hg38.chr3_KI270937v1_alt 11638 21 + 165607 GTCATGCCACCTCTCTTCCTG s panTro4.chr3 2534812 21 - 202329955 GTCACGCCACCCCTCTTCCTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780006 21 - 123690457 GTCACACCACCCCTCTTCCTG i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e macFas5.chr2 192361726 66 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=2457.000000 s hg38.chr3_KI270937v1_alt 11659 9 + 165607 TCACCATCC s panTro4.chr3 2534833 9 - 202329955 TCACCAACC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780027 9 - 123690457 TCACTGACA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361660 9 - 192460366 CCACCACCC i macFas5.chr2 T 66 I 1 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=2482.000000 s hg38.chr3_KI270937v1_alt 11668 10 + 165607 CTTCCTCAGC s panTro4.chr3 2534842 10 - 202329955 CTTCCTCAGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780036 10 - 123690457 CGTCCTCAGC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e macFas5.chr2 192361669 1 - 192460366 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=21241.000000 s hg38.chr3_KI270937v1_alt 11678 47 + 165607 ATCCTCAGGTCACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAG s panTro4.chr3 2534852 47 - 202329955 ATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780046 47 - 123690457 ATCCACAGGTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 47 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 I 1 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=22815.000000 s hg38.chr3_KI270937v1_alt 11725 52 + 165607 TGTCCACAGGTCACGCCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTGTC s panTro4.chr3 2534899 52 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780093 52 - 123690457 CATCCACAGGTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAGCATC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 52 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATC i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=4820.000000 s hg38.chr3_KI270937v1_alt 11777 5 + 165607 CACAG s panTro4.chr3 2534951 5 - 202329955 CACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780145 5 - 123690457 CACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361721 5 - 192460366 CACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291555 5 + 187378091 CACAG i papAnu2.chr2 T 53 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=32138.000000 s hg38.chr3_KI270937v1_alt 11782 48 + 165607 GTCATGCCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTGTCCACAG s panTro4.chr3 2534956 48 - 202329955 GTGACACCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCAGAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780150 48 - 123690457 GTCACACCACCTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291560 48 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=18812.000000 s hg38.chr3_KI270937v1_alt 11830 48 + 165607 GTCACGCTACCCCTCTTCCTCTCACCAGCCTTTCCTCAGTATCCACAG s panTro4.chr3 2535004 48 - 202329955 GTGACACCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780198 48 - 123690457 GTCACACCACCTCTCTTCCTGTCACTGACACGTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=3337.000000 s hg38.chr3_KI270937v1_alt 11878 18 + 165607 GTGACACCACGCCTCTTC s panTro4.chr3 2535052 18 - 202329955 GTGAGATCACCCCTCTTC i panTro4.chr3 C 0 I 815 s nomLeu3.chr11 2780246 18 - 123690457 GTCACACCACCTCTCTTC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=27900.000000 s hg38.chr3_KI270937v1_alt 11896 118 + 165607 CTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2535885 118 - 202329955 CTGTCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAGCATCCACAGGTGACAACACCCCCTCTTCTGTCACCGACGCTTCCTCAGC i panTro4.chr3 I 815 C 0 s nomLeu3.chr11 2780264 118 - 123690457 CTGTCACTGACACTTCCTCAGCATCCACAGGTCACACCACCTCTCTTCCTGTCACCAGTGCTTCCTCAGCATCCACAGGTCACATCACTTCTCTTCCTGTCACTGACACTTCCTCAGC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=21248.000000 s hg38.chr3_KI270937v1_alt 12014 56 + 165607 ATCC-ACAGGTCACGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2536003 55 - 202329955 ATCCAACAGGTGACA-CACCCCTCTTCCTGT-ACGGATACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780382 56 - 123690457 ATCC-ACAGGTCACATCACTTCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTC-ACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=7505.000000 s hg38.chr3_KI270937v1_alt 12070 21 + 165607 GTCACGCCACCCCTCTTCCTG s panTro4.chr3 2536058 20 - 202329955 GT-AAGCCACTCCTCTTCCTG i panTro4.chr3 C 0 T 813 s nomLeu3.chr11 2780438 21 - 123690457 GTCACATCACCTCTCTTCCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 21 - 192460366 GTCACGCTACCACTCTTCCTG i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=11325.000000 s hg38.chr3_KI270937v1_alt 12091 27 + 165607 ACACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535265 27 - 202329955 TCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 T 813 C 0 s nomLeu3.chr11 2780459 27 - 123690457 TCACCAGCGCTTCCTCAGAATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361699 27 - 192460366 TCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=21065.000000 s hg38.chr3_KI270937v1_alt 12118 48 + 165607 GTCACGCCACCCTTCTTCCTGTCACCGACACTTCCTCAGCATCCATAG s panTro4.chr3 2535292 48 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780486 48 - 123690457 GCCACCCCACCCCTCTTCCTGTCACTGACACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 48 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=4506.000000 s hg38.chr3_KI270937v1_alt 12166 12 + 165607 GTCACGCCACCT s panTro4.chr3 2535340 12 - 202329955 GTGACACCACCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780534 12 - 123690457 GTCACACCACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 12 - 192460366 GTCACGCTACCA i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=8373.000000 s hg38.chr3_KI270937v1_alt 12178 36 + 165607 CTCTTCCTGTCACCGACACTTCCTCAATATCCACAG s panTro4.chr3 2535352 36 - 202329955 CTCTTCCTGTCACCGATGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361690 36 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9920.000000 s hg38.chr3_KI270937v1_alt 12214 46 + 165607 GTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCATCCAC s panTro4.chr3 2535388 46 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 46 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 48 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10279.000000 s hg38.chr3_KI270937v1_alt 12260 50 + 165607 CGGTCACGCCACCCCGCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535434 50 - 202329955 AGGTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361676 50 - 192460366 AGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2350.000000 s hg38.chr3_KI270937v1_alt 12310 40 + 165607 GTCACGCCAACCCTCTTCATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2535484 40 - 202329955 GTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9548.000000 s hg38.chr3_KI270937v1_alt 12350 48 + 165607 ATCCACCGGTCACGCCACCCCGCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2535524 48 - 202329955 ATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 48 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 56 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=23070.000000 s hg38.chr3_KI270937v1_alt 12398 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAG s panTro4.chr3 2535572 56 - 202329955 ATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 56 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 56 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=3164.000000 s hg38.chr3_KI270937v1_alt 12454 40 + 165607 GTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535628 40 - 202329955 GTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10361.000000 s hg38.chr3_KI270937v1_alt 12494 48 + 165607 ATCCACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2535668 48 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGT i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 48 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=3825.000000 s hg38.chr3_KI270937v1_alt 12542 8 + 165607 ATCCACAG s panTro4.chr3 2535716 8 - 202329955 ATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361718 8 - 192460366 ATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291552 8 + 187378091 ACTCACAG i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4710.000000 s hg38.chr3_KI270937v1_alt 12550 12 + 165607 GTCAGGCCACCG s panTro4.chr3 2535724 12 - 202329955 GTCACGCCACCC i panTro4.chr3 C 0 T 144 s macFas5.chr2 192361678 12 - 192460366 GTCACGCTACCA i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291560 12 + 187378091 GTCATGCCACCC i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=15050.000000 s hg38.chr3_KI270937v1_alt 12562 36 + 165607 CTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro4.chr3 2535592 36 - 202329955 CTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAG i panTro4.chr3 T 144 C 0 s macFas5.chr2 192361690 36 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 s papAnu2.chr2 187291572 36 + 187378091 CTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10411.000000 s hg38.chr3_KI270937v1_alt 12598 136 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535628 136 - 202329955 GTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=12146.000000 s hg38.chr3_KI270937v1_alt 12734 56 + 165607 ATCCACAGGTCACGCCACTCCTCTTCTTGTCACCGACGCTTCCTCAGCATCCACAG s panTro4.chr3 2535764 56 - 202329955 ATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 56 T 57 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5563.000000 s hg38.chr3_KI270937v1_alt 12790 65 + 165607 GTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTT s panTro4.chr3 2535820 65 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTACCCACAGGTGACACCACCCCTCTT i panTro4.chr3 C 0 T 528 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1357.000000 s hg38.chr3_KI270937v1_alt 12855 23 + 165607 CCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535357 23 - 202329955 CCTGTCACCGATGCTTCCTCAGT i panTro4.chr3 T 528 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=12691.000000 s hg38.chr3_KI270937v1_alt 12878 56 + 165607 ATCCACCGGTCATGCCACCTCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535380 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1606.000000 s hg38.chr3_KI270937v1_alt 12934 18 + 165607 GTGACACCACCTCTCTTC s panTro4.chr3 2535436 18 - 202329955 GTGACACCACCCCTCTTC i panTro4.chr3 C 0 I 431 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7131.000000 s hg38.chr3_KI270937v1_alt 12952 96 + 165607 CTGTCACCGACACTTCCTCAGCATACACAGGTGACACCACCTCTCTTCCTGTCACCGACACTTCCTCATCATCCACAGGTGACACCA-CCCCTCTTC s panTro4.chr3 2535885 97 - 202329955 CTGTCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAGCATCCACAGGTGACAACACCCCCTCTTC i panTro4.chr3 I 431 T 432 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1541.000000 s hg38.chr3_KI270937v1_alt 13048 21 + 165607 TTGTCACCGAGACTTCCTCAG s panTro4.chr3 2535550 21 - 202329955 CTGTCACCGACGCTTCCTCAG i panTro4.chr3 T 432 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6099.000000 s hg38.chr3_KI270937v1_alt 13069 28 + 165607 TATCCACAGGTCACGCCACTCCTCTTCT s panTro4.chr3 2535571 28 - 202329955 TATCCACAGGTCACACCACCCCTCTTCC i panTro4.chr3 C 0 I 383 s papAnu2.chr2 187291551 28 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGC i papAnu2.chr2 T 57 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4456.000000 s hg38.chr3_KI270937v1_alt 13097 21 + 165607 TGTCACCGACGCTTCCTCAGC s panTro4.chr3 2535982 21 - 202329955 TGTCACCGACGCTTCCTCAGC i panTro4.chr3 I 383 C 0 s papAnu2.chr2 187291579 21 + 187378091 CGTCAGCAGCGCATCCTCAGC i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2445.000000 s hg38.chr3_KI270937v1_alt 13118 5 + 165607 ATCCA s panTro4.chr3 2536003 5 - 202329955 ATCCA i panTro4.chr3 C 0 T 383 s macFas5.chr2 192361670 5 - 192460366 ATTCA i macFas5.chr2 T 56 C 0 s papAnu2.chr2 187291600 5 + 187378091 ATCCA i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1746.000000 s hg38.chr3_KI270937v1_alt 13123 3 + 165607 CAG s panTro4.chr3 2535625 3 - 202329955 CAG i panTro4.chr3 T 383 C 0 s macFas5.chr2 192361675 3 - 192460366 CAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291605 3 + 187378091 CAG i papAnu2.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=16562.000000 s hg38.chr3_KI270937v1_alt 13126 44 + 165607 GTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCATCC s panTro4.chr3 2535628 44 - 202329955 GTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCC i panTro4.chr3 C 0 I 336 s macFas5.chr2 192361678 44 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291560 44 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCC i papAnu2.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2292.000000 s hg38.chr3_KI270937v1_alt 13170 4 + 165607 ACAG s panTro4.chr3 2536008 4 - 202329955 ACAG i panTro4.chr3 I 336 C 0 s macFas5.chr2 192361722 4 - 192460366 ACAG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 187291604 4 + 187378091 ACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1910.000000 s hg38.chr3_KI270937v1_alt 13174 39 + 165607 GTGACACCACCCCTGTGCCTGTCACCGACACTTCCTCAG s panTro4.chr3 2536012 37 - 202329955 GTGACA-CACCCCTCTTCCTGT-ACGGATACTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6247.000000 s hg38.chr3_KI270937v1_alt 13213 31 + 165607 TATCCACAGGTCACGCCACCCCTCTTCCTGT s panTro4.chr3 2536049 30 - 202329955 TATCCACAGGT-AAGCCACTCCTCTTCCTGT i panTro4.chr3 C 0 T 333 s macFas5.chr2 192361669 31 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGT i macFas5.chr2 T 57 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5181.000000 s hg38.chr3_KI270937v1_alt 13244 26 + 165607 CACCGGCCTTTCCTCAGCTTCCACAG s panTro4.chr3 2535746 26 - 202329955 CACCAGCCCTTCCTCAGCATCCACAG i panTro4.chr3 T 333 C 0 s macFas5.chr2 192361700 26 - 192460366 CACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2564.000000 s hg38.chr3_KI270937v1_alt 13270 40 + 165607 GTGACACCACCCGTCTTCCTGTCACCGACATTTCCTCGGC s panTro4.chr3 2535772 40 - 202329955 GTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=12239.000000 s hg38.chr3_KI270937v1_alt 13310 56 + 165607 ATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAACACTTCCTCAGTATCCACAG s panTro4.chr3 2535812 56 - 202329955 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGTACCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1281.000000 s hg38.chr3_KI270937v1_alt 13366 17 + 165607 GTGACACCATGCCTCTT s panTro4.chr3 2535868 17 - 202329955 GTGACACCACCCCTCTT i panTro4.chr3 C 0 T 1248 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1488.000000 s hg38.chr3_KI270937v1_alt 13383 23 + 165607 CCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2534637 23 - 202329955 CCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 T 1248 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=22394.000000 s hg38.chr3_KI270937v1_alt 13406 54 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCAC s panTro4.chr3 2534660 54 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 54 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 56 T 54 s papAnu2.chr2 187291552 54 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCAC i papAnu2.chr2 T 56 T 55 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1094.000000 s hg38.chr3_KI270937v1_alt 13460 17 + 165607 CGGTCACGCCACCCCTG s panTro4.chr3 2534714 17 - 202329955 AGGTCACACCACCCCTC i panTro4.chr3 C 0 I 288 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361724 54 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2196.000000 s hg38.chr3_KI270937v1_alt 13477 25 + 165607 TTCCTGTCACCAGCACTTCCTCAGC s panTro4.chr3 2535019 25 - 202329955 TTCCTGTCACCAGCCCTTCCTCAGC i panTro4.chr3 I 288 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361724 54 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=11817.000000 s hg38.chr3_KI270937v1_alt 13502 56 + 165607 ATCTACAGGTCACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535044 56 - 202329955 ATCCACAGGTGAGATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 54 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=6195.000000 s hg38.chr3_KI270937v1_alt 13558 88 + 165607 GTGACACCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCTACAGGTCACACCACCCCTCTTCATGTCACCATCCCTTCCTCAGC s panTro4.chr3 2535100 88 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAGCGGTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGC i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=11768.000000 s hg38.chr3_KI270937v1_alt 13646 54 + 165607 ATCCACAGGTGACACCAGCACTCTTCCTGTCACCGGCGCTTCCTCAGCATCCAC s panTro4.chr3 2535188 54 - 202329955 ATCCACAGGTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCAC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 54 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 56 T 55 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=1376.000000 s hg38.chr3_KI270937v1_alt 13700 20 + 165607 CGGTCACGCCACCCCTCTTC s panTro4.chr3 2535242 20 - 202329955 AGGTGACACCACCCCTCTTC i panTro4.chr3 C 0 I 623 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361724 55 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9971.000000 s hg38.chr3_KI270937v1_alt 13720 123 + 165607 CTGTCACCGACACTTCCTCAGTATCCACCGGTCACGCCACGCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCGGCATCCA s panTro4.chr3 2535885 123 - 202329955 CTGTCACCGACACTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAGCATCCACAGGTGACAACACCCCCTCTTCTGTCACCGACGCTTCCTCAGCATCCA i panTro4.chr3 I 623 T 623 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361724 55 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7609.000000 s hg38.chr3_KI270937v1_alt 13843 90 + 165607 CAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCTTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535385 90 - 202329955 CAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAG i panTro4.chr3 T 623 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291606 55 + 187378091 T e macFas5.chr2 192361724 55 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=23835.000000 s hg38.chr3_KI270937v1_alt 13933 57 + 165607 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535475 57 - 202329955 TATCCACAGGTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 55 T 57 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 55 T 57 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10536.000000 s hg38.chr3_KI270937v1_alt 13990 135 + 165607 GTGACACCACCCGTCTTCCTGTCACGGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCTTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535532 135 - 202329955 GTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=23189.000000 s hg38.chr3_KI270937v1_alt 14125 57 + 165607 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAG s panTro4.chr3 2535667 57 - 202329955 CATCCACAGGTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 57 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 57 T 56 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=9864.000000 s hg38.chr3_KI270937v1_alt 14182 135 + 165607 GTGACACCACCCGTCTTCCTGTCACGGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCATCCCTTCCTCATCATCCTCAGGTCACACCACCCCTCTTCCTGTCACCAGCACTTCCTCAG s panTro4.chr3 2535724 135 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=5071.000000 s hg38.chr3_KI270937v1_alt 14317 26 + 165607 TATCTACAGGTCACGTCACCCCTCTT s panTro4.chr3 2535859 26 - 202329955 TACCCACAGGTGACACCACCCCTCTT i panTro4.chr3 C 0 T 960 s macFas5.chr2 192361669 26 - 192460366 TATTCACAGGTCACGCTACCACTCTT i macFas5.chr2 T 57 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4326.000000 s hg38.chr3_KI270937v1_alt 14343 23 + 165607 CATGTCACCAGCCCTTCCTCAGC s panTro4.chr3 2534925 23 - 202329955 CCTGTCACCAGCCCTTCCTCAGT i panTro4.chr3 T 960 C 0 s macFas5.chr2 192361695 23 - 192460366 CCTGTCACGGGTGCTTTCTCAGC i macFas5.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270937v1_alt 14366 1 + 165607 A s panTro4.chr3 2534948 1 - 202329955 A i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 1 - 192460366 A i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291552 1 + 187378091 A i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=15971.000000 s hg38.chr3_KI270937v1_alt 14367 25 + 165607 TCCACAGGTCACGTCACCCCTCTTC s panTro4.chr3 2534949 25 - 202329955 TCCACAGGTGACACCACCCCTCTTC i panTro4.chr3 C 0 I 911 s macFas5.chr2 192361671 25 - 192460366 TTCACAGGTCACGCTACCACTCTTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291553 25 + 187378091 CTCACAGGTCATGCCACCCCTCTTG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73793833 25 + 74750902 TCCACAGGCCACGCGGCCCCTCTTG i calJac3.chr17 T 55 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=19991.000000 s hg38.chr3_KI270937v1_alt 14392 30 + 165607 CTGTCACCAGCACTTCCTCAGCATCCACAG s panTro4.chr3 2535885 30 - 202329955 CTGTCACCGACACTTCCTCAGTATCCACAG i panTro4.chr3 I 911 C 0 s macFas5.chr2 192361696 30 - 192460366 CTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291578 30 + 187378091 CCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 53 s calJac3.chr17 73793858 30 + 74750902 CTGTCACCAGCACCGCCTCGGCACCCACAG i calJac3.chr17 C 0 T 56 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=7881.000000 s hg38.chr3_KI270937v1_alt 14422 39 + 165607 GTCACGCCACCCCTCTTCTTGTCACCGACGCTTCCTCAG s panTro4.chr3 2535915 39 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCCCTTCCTCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=369.000000 s hg38.chr3_KI270937v1_alt 14461 4 + 165607 TGTC s panTro4.chr3 2535954 4 - 202329955 CATC i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 4 - 192460366 TATT i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=18548.000000 s hg38.chr3_KI270937v1_alt 14465 49 + 165607 CACAGGTCACGCCACGCCTCTTCCTGTCACCGACGCTTCCTCAGCATCC s panTro4.chr3 2535958 49 - 202329955 CACAGGTGACAACACCCCCTCTTCTGTCACCGACGCTTCCTCAGCATCC i panTro4.chr3 C 0 T 911 s macFas5.chr2 192361673 49 - 192460366 CACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291555 49 + 187378091 CACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCC i papAnu2.chr2 T 53 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2292.000000 s hg38.chr3_KI270937v1_alt 14514 4 + 165607 ACAG s panTro4.chr3 2535096 4 - 202329955 ACAG i panTro4.chr3 T 911 C 0 s macFas5.chr2 192361722 4 - 192460366 ACAG i macFas5.chr2 C 0 T 56 s papAnu2.chr2 187291604 4 + 187378091 ACAG i papAnu2.chr2 C 0 T 56 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10970.000000 s hg38.chr3_KI270937v1_alt 14518 136 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGC s panTro4.chr3 2535100 136 - 202329955 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGTATCCAGCGGTGACATCACGTCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAGGTGACATCACCCCTCTTCCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=12044.000000 s hg38.chr3_KI270937v1_alt 14654 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTCACCATCCCTTCCTCAGTATCCACAG s panTro4.chr3 2535236 56 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2900.000000 s hg38.chr3_KI270937v1_alt 14710 40 + 165607 GTGACACCATGCCTCTTCCTGTCACTAGCCCTTCCTCAGC s panTro4.chr3 2535292 40 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=11660.000000 s hg38.chr3_KI270937v1_alt 14750 56 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGTTACCGGCCTTTCCTCAGCTTCCACAG s panTro4.chr3 2535332 56 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGATGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 56 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=3378.000000 s hg38.chr3_KI270937v1_alt 14806 40 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2535388 40 - 202329955 GTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=11678.000000 s hg38.chr3_KI270937v1_alt 14846 56 + 165607 ATCCACACGTCACGCCACCCCTCTTCCTGTCACCGACACTTCCTCAGCTTCCACAG s panTro4.chr3 2535428 56 - 202329955 ATCCACAGGTGACACCACCCCTCTTCCTGTCACCGACGCTCCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361670 56 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 56 T 57 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2994.000000 s hg38.chr3_KI270937v1_alt 14902 40 + 165607 ATGACACCACCCGTCTTCCTGTCACCGACGTTTCCTCGGC s panTro4.chr3 2535484 40 - 202329955 GTGACACCACCCCTCTTTCTGTCACCGACGCTTCCTCAGT i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=11425.000000 s hg38.chr3_KI270937v1_alt 14942 56 + 165607 ATCCACAGGACATGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAGCATCCACAG s panTro4.chr3 2535524 56 - 202329955 ATCCACAGGTGACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s papAnu2.chr2 187291552 56 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 56 T 57 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=2972.000000 s hg38.chr3_KI270937v1_alt 14998 39 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAG s panTro4.chr3 2535580 39 - 202329955 GTCACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAG i panTro4.chr3 C 0 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=22415.000000 s hg38.chr3_KI270937v1_alt 15037 57 + 165607 TATCCACAGGTCACGCCACCTCTCTTCCTGTCACCAGCCGTTCCTCAGCATCCACAG s panTro4.chr3 2535619 57 - 202329955 CATCCACAGGTGACACCACCCCTCTTCCTGTCACCATCTCTTCCTCAGCATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 48 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 57 T 57 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=8058.000000 s hg38.chr3_KI270937v1_alt 15094 39 + 165607 GTCACGCCACCCCCCTTCCTGTCACCGACACTTCCTCAG s panTro4.chr3 2535676 39 - 202329955 GTGACACCACCCCTCTTCCTGTCACTGATACTTCCTCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 57 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=20336.000000 s hg38.chr3_KI270937v1_alt 15133 48 + 165607 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCACTTCCTCAG s panTro4.chr3 2535715 48 - 202329955 TATCCACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 48 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291551 48 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAG i papAnu2.chr2 T 57 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=23471.000000 s hg38.chr3_KI270937v1_alt 15181 57 + 165607 TATCTACAGGTCACGCCACCCCTCTTCCTGTCACCAGCCCTTCCTCAGCATCCACAG s panTro4.chr3 2535763 57 - 202329955 CATCCACAGGTCACGCCAACCCTCTTCCTGTCACCGACGCTTCCTCAGTATCCACAG i panTro4.chr3 C 0 C 0 s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291551 57 + 187378091 TACTCACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 T 48 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=10224.000000 s hg38.chr3_KI270937v1_alt 15238 23 + 165607 GTCACGCCACCCCTGTTCCTGTC s panTro4.chr3 2535820 23 - 202329955 GTCACGCCACCCCTCTTCCTGTC i panTro4.chr3 C 0 I 165 s macFas5.chr2 192361678 23 - 192460366 GTCACGCTACCACTCTTCCTGTC i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291560 23 + 187378091 GTCATGCCACCCCTCTTGCCGTC i papAnu2.chr2 T 48 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C a score=4872.000000 s hg38.chr3_KI270937v1_alt 15261 25 + 165607 ACCAGCACTTCCTCAGCATCCACAG s macFas5.chr2 192361701 25 - 192460366 ACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 57 s papAnu2.chr2 187291583 25 + 187378091 AGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 53 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=0.000000 s hg38.chr3_KI270937v1_alt 15286 39 + 165607 GTGACACCACCCCTCTTCCTGTCACCAATGCTTCCTCAT e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e macFas5.chr2 192361726 57 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=3744.000000 s hg38.chr3_KI270937v1_alt 15325 57 + 165607 TATCCACAGGTCACGCCACCCCTCTTCATGTCACCAGCCCTTCCTCAGCATCCAGAG s macFas5.chr2 192361669 57 - 192460366 TATTCACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 T 57 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=3239.000000 s hg38.chr3_KI270937v1_alt 15382 46 + 165607 GTGACACCAGCACTCTTCCTGTCACCGATGCTTCCTCAGCATCCAC s macFas5.chr2 192361678 46 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCAC i macFas5.chr2 T 48 T 49 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=0.000000 s hg38.chr3_KI270937v1_alt 15428 191 + 165607 CGGTCACGCCACCCCTCTTCCTCTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACCGACACTTCCTCTGCATCCACAGGTCAGGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAGTATCCACAGGTGACACCACGCCTCTTCCTGTCACCATCCCTTCCTCAGCATCCT e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e macFas5.chr2 192361724 49 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=2971.000000 s hg38.chr3_KI270937v1_alt 15619 42 + 165607 CAGGTCACACCACCTCTCTTCCTGTCACCGACGCTTCCTCAG s macFas5.chr2 192361675 42 - 192460366 CAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 49 T 48 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=91.000000 s hg38.chr3_KI270937v1_alt 15661 1 + 165607 T s macFas5.chr2 192361669 1 - 192460366 T i macFas5.chr2 T 48 C 0 e calJac3.chr17 73793888 56 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=349.000000 s hg38.chr3_KI270937v1_alt 15662 3 + 165607 GTC s macFas5.chr2 192361670 3 - 192460366 ATT i macFas5.chr2 C 0 C 0 s calJac3.chr17 73793832 3 + 74750902 GTC i calJac3.chr17 T 56 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 53 + 187378091 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=6562.000000 s hg38.chr3_KI270937v1_alt 15665 17 + 165607 CACAGGTCACGGCACCC s macFas5.chr2 192361673 17 - 192460366 CACAGGTCACGCTACCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291555 17 + 187378091 CACAGGTCATGCCACCC i papAnu2.chr2 T 53 C 0 s calJac3.chr17 73793835 17 + 74750902 CACAGGCCACGCGGCCC i calJac3.chr17 C 0 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e nomLeu3.chr11 2780546 0 - 123690457 C e panTro4.chr3 2535843 165 - 202329955 I a score=21852.000000 s hg38.chr3_KI270937v1_alt 15682 32 + 165607 CTCTTCCTGTCACCAGCACTTCCTCAGCATCC s nomLeu3.chr11 2780546 32 - 123690457 CTCTTCCTGTCACCAGCGCTTCCTCAGCATCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361690 32 - 192460366 CTCTTCCTGTCACGGGTGCTTTCTCAGCATCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291572 32 + 187378091 CTCTTGCCGTCAGCAGCGCATCCTCAGCATCC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73793852 32 + 74750902 CTCTTGCTGTCACCAGCACCGCCTCGGCACCC i calJac3.chr17 C 0 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e panTro4.chr3 2535843 165 - 202329955 I a score=5730.000000 s hg38.chr3_KI270937v1_alt 15714 4 + 165607 ACAG s panTro4.chr3 2536008 4 - 202329955 ACAG i panTro4.chr3 I 165 C 0 s nomLeu3.chr11 2780578 4 - 123690457 ACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361722 4 - 192460366 ACAG i macFas5.chr2 C 0 T 56 s papAnu2.chr2 187291604 4 + 187378091 ACAG i papAnu2.chr2 C 0 T 56 s calJac3.chr17 73793884 4 + 74750902 ACAG i calJac3.chr17 C 0 T 55 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=6768.000000 s hg38.chr3_KI270937v1_alt 15718 40 + 165607 GTGACACCACCCCTCTTCCTGTCACCGACACTTCCTCAGC s panTro4.chr3 2536012 38 - 202329955 GTGACA-CACCCCTCTTCCTGT-ACGGATACTTCCTCAGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2780582 40 - 123690457 GTCACGCCACCTCTCTTCCTGTCACCAGCGCTTCCTCAGC i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e papAnu2.chr2 187291608 56 + 187378091 T e macFas5.chr2 192361726 56 - 192460366 T e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=19141.000000 s hg38.chr3_KI270937v1_alt 15758 30 + 165607 ATCCACAGGTCACGCCACCCCTCTTCCTGT s panTro4.chr3 2536050 29 - 202329955 ATCCACAGGT-AAGCCACTCCTCTTCCTGT i panTro4.chr3 C 0 M 1364 s nomLeu3.chr11 2780622 30 - 123690457 ATCCACAGGTCACAGCACCTCTCTTCCTGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361670 30 - 192460366 ATTCACAGGTCACGCTACCACTCTTCCTGT i macFas5.chr2 T 56 C 0 s papAnu2.chr2 187291552 30 + 187378091 ACTCACAGGTCATGCCACCCCTCTTGCCGT i papAnu2.chr2 T 56 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I a score=10877.000000 s hg38.chr3_KI270937v1_alt 15788 26 + 165607 CACCGACACTTCCTCAGCATCCACAG s nomLeu3.chr11 2780652 26 - 123690457 CACCAGCACTTCCTCAGCATCCACAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361700 26 - 192460366 CACGGGTGCTTTCTCAGCATCCACAG i macFas5.chr2 C 0 T 48 s papAnu2.chr2 187291582 26 + 187378091 CAGCAGCGCATCCTCAGCATCCACAG i papAnu2.chr2 C 0 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=14644.000000 s hg38.chr3_KI270937v1_alt 15814 39 + 165607 GTCACGCCACCCCTCTTCCTGTCACCAGCCTTTCCTCAG s nomLeu3.chr11 2780678 39 - 123690457 GTGACACCACCCCTCTTCCTGTCACCAGCACTTCCTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361678 39 - 192460366 GTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAG i macFas5.chr2 T 48 T 48 s papAnu2.chr2 187291560 39 + 187378091 GTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAG i papAnu2.chr2 T 48 T 48 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=726.000000 s hg38.chr3_KI270937v1_alt 15853 2 + 165607 TA s nomLeu3.chr11 2780717 2 - 123690457 CA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361669 2 - 192460366 TA i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187291551 2 + 187378091 TA i papAnu2.chr2 T 48 C 0 e calJac3.chr17 73793888 55 + 74750902 T e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=627.000000 s hg38.chr3_KI270937v1_alt 15855 2 + 165607 TC s nomLeu3.chr11 2780719 2 - 123690457 TC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192361671 2 - 192460366 TT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291553 2 + 187378091 CT i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73793833 2 + 74750902 TC i calJac3.chr17 T 55 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e chlSab2.chr15 91319385 620 + 91754291 I e rheMac3.chrUn_JH291127 55561 620 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=100767.000000 s hg38.chr3_KI270937v1_alt 15857 68 + 165607 CACAGGTCACGCCACCCCTCTTGCTGTCAGCAGTGCTACCTCAGCTTCCACAGTATCCTCGGACTCCC s nomLeu3.chr11 2780721 68 - 123690457 CACAGGTCACAGCACCTCTCTTCCTGTCAGAAGCACTTCCTCAGCATCTACAGCATCCTCGGGCTCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 56181 68 - 111706 CACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAGTATCCTCGGGCTCCC i rheMac3.chrUn_JH291127 I 620 C 0 s macFas5.chr2 192361673 68 - 192460366 CACAGGTCACGCTACCACTCTTCCTGTCACGGGTGCTTTCTCAGCATCCACAGTATCCTCGGGCTCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291555 68 + 187378091 CACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAGTATCCTCGGGCTCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91320005 68 + 91754291 CACAGGTCATGCCACCCCTCTTGCCGTCAGCAGCGCATCCTCAGCATCCACAGTATCCTCGGGCTCCC i chlSab2.chr15 I 620 C 0 s calJac3.chr17 73793835 68 + 74750902 CACAGGCCACGCGGCCCCTCTTGCTGTCACCAGCACCGCCTCGGCACCCACAGTGTCCTCGGGCGCAG i calJac3.chr17 C 0 C 0 e canFam3.chr33 2290930 1063 - 31377067 I e panTro4.chr3 2536079 1364 - 202329955 M a score=183272.000000 s hg38.chr3_KI270937v1_alt 15925 113 + 165607 CTCTGAAGATGGAAACACCAGGTAGCTGCCAACTGCCTCG--CCTTTATGTCTCCCAGTGGGCCCCTT-GGCGGAATTCAGCCTA-AGGAGTACCTGAG-AACACTGGTGCATTCGCA s nomLeu3.chr11 2780789 113 - 123690457 CTCTGAAGAAGGAAACATCAGGTAACTGCCATCTGCCTCG--TCTTCATCTCTCCCAGTGGGCCCCTT-GGTGGAATTCAGCCTC-AGGAGTACCTGAG-AACACTGGTGCATTCGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 56249 113 - 111706 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGGCCCCCTT-GGCTGAATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCGCATTCACA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192361741 113 - 192460366 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCATCTCTCCCAGTGGCCCCCTT-GGCTGAATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCACATTCACA i macFas5.chr2 C 0 I 147 s papAnu2.chr2 187291623 113 + 187378091 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGGCCCCCTT-GGCTGAATTCAGCCTA-AGGAGTACTTGAG-AACACTGGCGCATTCATA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91320073 113 + 91754291 CTCTGAAGACGGAAACATCAGGTAGCTGCCATCTGCCTTG--TCTTCGTCTCTCCCAGTGGCCCCCTT-GGCTGAATTCGGCCTA-AGGAGTACTGGAG-AACACTGGCGCATTCACA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73793903 105 + 74750902 CTCGGAAGACGGAAGCACCTGGTAGCGGCCCCCTTCCTTG--CCTTCGTCTCTCCCACTGACCCCCCTAGGTTCAATCCAGCCT----GAGTGCTTGCC-AGCACTGGTGAA------ i calJac3.chr17 C 0 C 0 s canFam3.chr33 2291993 115 - 31377067 CTCTGAGCACTCAGACGTCAGGTAG--GCCGGGAGTCCGGGATATTTGTCTCTCACTGTGGCCTCATT-CGTTCAGTTCGACCTAGAGGAGGGCTTGAGCGATGATGGTGCGTTCGCC i canFam3.chr33 I 1063 C 0 e panTro4.chr3 2536079 1364 - 202329955 M a score=148136.000000 s hg38.chr3_KI270937v1_alt 16038 88 + 165607 TTACCTGGTGGGGCCGTGTCAGGTCCCACAGGGGAGGAGGTGA---TGGGTGTGGTGGGTGACAGGCTCACCCTCCTTTGTGCCGCAATCG s nomLeu3.chr11 2780902 88 - 123690457 TTACCTGGTGTGGCTGAGTCAGGTCCCACAGGGGAGGAGGCGA---TGGGTGTGGTGGGTGACAGGCTCACTCTCCTGTGTGCCCCAATCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 56362 88 - 111706 TTATCCGGTGGGACTGAGTCAGGTCCCACAGAGGAGGAGGTGA---TGGGTGTGGTGGGTGACAGGCTCACCCCACTCTCTGCCCCAGTCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192362001 88 - 192460366 TTATCCGGTGGGACTGAGTCAGGTCCCACAGAGGAGGAGGTGA---TGGGTGTGGTGGGTGACAGGCTCACCCCACTCTCTGCCCCAGTCG i macFas5.chr2 I 147 C 0 s papAnu2.chr2 187291736 88 + 187378091 TTATCCGGTGGGACTGAGTCAGGTCCCACAGAGGAGGAGGTGA---TGGGTGTGGTGGGTGACAGGCTCACCCCACTCTCTGCCCCAGTCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91320186 86 + 91754291 GTATCCGGTGGGACTGAGTCAGGTCCCACAGAGGAGGAGGTGA---TGGGTGTGGTGGGCGACAGGCTTACCCCA--CTCTGCCCCAGTCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73794008 86 + 74750902 TTACCTGGTGGGGCCGGGTTAGGGCCCACAGAGGAGGAGGCGA---TGGGTGTGG-GGGTGACAGGC-CACCCTCCTCCCTGCCCCCGTAG i calJac3.chr17 C 0 I 303 s canFam3.chr33 2292108 83 - 31377067 -TAGTTTGAGGG-------CAGTTCCACTAGAAGACGAATTGAGTGCGAGTGTGGAGAGTGACAGGCGGACCATCCACTCTACCCCAGAGG i canFam3.chr33 C 0 C 0 e panTro4.chr3 2536079 1364 - 202329955 M a score=244589.000000 s hg38.chr3_KI270937v1_alt 16126 145 + 165607 AAAAGCACTGA-TGTCGAGAGTAGTTTGGATATGAGCAGGGGAGA----GACAAG-GA-GTTTCCAGCTCCCTCTTCCAGCTCCTGATTTCTTTGAATCTCTTTGACTCTCCTGTTTTGTTACTGTAAGAAACACCCC-GCCTTGTCTTTTCA s nomLeu3.chr11 2780990 146 - 123690457 AAAACCACTGA-TGTCGAAAGTAGTCTGGATATGACCAGCGGATA----GACAAG-GA-GTTTCCAGCTCTCTCTTCCACCTCCTGATTTCTTTGAATCTCTTCGACTCTGCTGTTCTCTTACTGTAAGAACCACCCCTGCCTTCTCTTTTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 56450 146 - 111706 AAAACCGCTGA-TGTCGAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GA-GTTTCCAGCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTCTTTGACTCTGCTGTTTTCTTACTGTAAGAACCACCCCTGCCTTCTCTTTTCA i rheMac3.chrUn_JH291127 C 0 I 13 s macFas5.chr2 192362089 146 - 192460366 AAAACTGCTGA-TATCGAGAGTGGTTTGGATATGACCAGTGGACA----GACAAG-GA-GTTTCCAACTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTCTTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCCTGCCTTCTCTTTTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187291824 146 + 187378091 AAACCCGCTGA-TGTCCAGAGTGGTTTGGATATGACCAGCGGACA----GACAAG-GA-GTTTCCAGCTCTCTCTTCCAGCTCCTGATTTCTTTGAATCTCTTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCCTGCCTTCTCTTTTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91320272 145 + 91754291 AAACCCGCTGA-TGTCGAGAGTGGTTTGGATATGACCAGCGGACA----GACACG-GA-GTTTCCAGCTC-CTCTTCCAGCTCCTGATTTCTTTGAATCTCTTTGACTCTGCTGTTCTCTTACTGTAAGAACCACCCCTGCCTTCTCTTTTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73794397 146 + 74750902 aaaaCCTCTTA-TGTGGAGAGTGCCTTGGACGTGACCAGTAGACAGATGGACAAG-GAGGTTTCTAGCT--CTCTTCCAGCTCCTGATTTCTCTGAATCTCTCTAACTCTGCTGTTC---TACTGTAAGAGCCACCCCTGCCTTCTCTGTTCA i calJac3.chr17 I 303 C 0 s canFam3.chr33 2292191 131 - 31377067 ACTGTTTCTTATTGTCGGGAGCAGTTTGGGTTTGAGCAGAAGATG----GATGAGAGA-GTT----------TCTTCCATCTCCTGAAATCTGTGACACTGTT------TGCTACTTTCAGATAATAAGACCCACTGCAATCTTCTCTCCTA- i canFam3.chr33 C 0 C 0 e panTro4.chr3 2536079 1364 - 202329955 M a score=91831.000000 s hg38.chr3_KI270937v1_alt 16271 97 + 165607 CGTGTCCAGGAATGACAACACCGTCACTGAAGACAGACGGTGGGAGACGCACAGCCACATCACC---------------------------------------------------------------------------------------ACCCCCCACAACCTCCCAGACCATCATTTCCAC s nomLeu3.chr11 2781136 97 - 123690457 CCTGTCCCGGGATGACAACACCGTCACTGAAGACAGACGGTGGGGGACGCACAGCCACATCCCC---------------------------------------------------------------------------------------ACCCCCCACAACCTCCCAGACCATCATTTCCGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192362235 97 - 192460366 TGTGTCCAGGAATGATGACAACCTCAGTGAAGACAAGCAGCGAGAGTCACCGAGTCACATCACT---------------------------------------------------------------------------------------ACCCCCAACAACCTCCAAGACCACCACAGCCAC i macFas5.chr2 C 0 M 14732 s papAnu2.chr2 187291970 97 + 187378091 CGTGTCCAGGAATGACGACAACCTCAGTGAAGACAGGCAGCGAGAGTGGCCGAGTCACATCACT---------------------------------------------------------------------------------------acccccaacaacctcccagaccgccacagcccc i papAnu2.chr2 C 0 I 39 s chlSab2.chr15 91320417 184 + 91754291 CGTGTCCAGGAATGACGACAACGTCAGTGAAGACAGGCAGCGAGAGTGGCCGAGTCACCTCACTACCCCCGACCACCTCCCAGACCGCCACAGCCACATCCACACCCCCAACGACCTCTGAGACCGCCACCTCCACCACAGCCCCATCCCCACCCCCGACCACCTCCCAGGCCGCCACCTCCGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73794543 97 + 74750902 CATGTCCAGGAATGATGACACCCTCCCTGAAGACCGACACTGGGAGAAGCACGGCCGCATCACT---------------------------------------------------------------------------------------GCCCCCAACAACCTCCCGAACCATCACCTCCGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2292322 97 - 31377067 TATGCCCAGGAACCACGGTAACTTCCCTGGCGATAGGCAGCCAGAGTAGCACAACAACATCACT---------------------------------------------------------------------------------------ATCTTCAACAACCTCGCGGACGCTCACTACTCT i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 56596 13 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=31621.000000 s hg38.chr3_KI270937v1_alt 16368 37 + 165607 CATTCCCAGCA-CTGCCATGCACACCCGCTCCACAGCT s nomLeu3.chr11 2781233 37 - 123690457 CGCTCCCAGCA-CTGCCACGCACACCCGCTCCACAGCC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187292106 37 + 187378091 cactcccagca-ctgccacgcacacccgctccacagcc i papAnu2.chr2 I 39 I 6 s chlSab2.chr15 91320601 37 + 91754291 CACTCCCAGCA-CTGCCACGCACACCCGCTCCACAGCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73794640 37 + 74750902 CATTCCCAACA-CTTCCACAGACACCCGATCCACAGCT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2292419 34 - 31377067 -CCCTCCAGCAGCATCCACG---GCACACTCAACGGCT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56596 13 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=419008.000000 s hg38.chr3_KI270937v1_alt 16405 366 + 165607 GCCCCCATCCCCATCCTGCCTGAGAGAGGTG----AGGCCATACAGGTGAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTTTTGAGGGGTGATGTAACTGAAGGCTCCCTCTCAGCCTACT-T-CCCACAGTCTCCGCTCTCTCGGGTGGGGAGGGCCTTACCGAGGACAGGGACACAGCATCGGAGTC-GCTCCTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATGACCCCAGTGCCATTCAGCAAGGGATAGATGGACGGTC-------------CGGTAGCGGCGGTTAGAGGACTCATCCCAGGGTCTAAGTGCACACAATGGAAGGCCCTAAGGAATGC-----------------------------------------------AGAGCCGGGGATGGAGGAGCACCCCAGGCAGGGAGGAGGG s nomLeu3.chr11 2781270 370 - 123690457 GCCCCCATCCCCATCCCGCCTGAGAAAGGTGAGTCAGGCCATACAGGCGAGGCC------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CCTTTTGAGGGGCGACGTAACTGAAGGCTCCCGCTCAGCCTGCT-T-CCCACAGTCTCTGCTCTCTCGGGTCGGGAGGGCCTTACCAAGCACAGGAACACAACATCGGAGTC-GCTGCTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGAGCTGGAGACAGAGAAATGACCTCGGTGCCATTCAGCAAGAGACAGATGGACTGTC-------------TCATAGAGGCGGTTAGAGGGCTTATCCCAGGGTCTAAGTGCACACAATGGAAGGCCCTGAGGAATGC-----------------------------------------------AGAGACAGGGATGGAGGAGCACCCCAAGCAGGGAGGAGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 56609 383 - 111706 gcccccgtccccgtcccGCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACT------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTTTTGGGCGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-T-CCCACAGTCTCTGCTCTTTCGGGTCGGGAGGGCCTTACTGAGGACAGGGACACAGCATTGGAGTC-GCTGCTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATGACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGTCNNNNNNNNNNNNNNNNNNNNNNNGGTTAGAGGACTCATGCCAGGGTCTAAGCACACACAATGGAAAGCCCTAAGGAAGGC-----------------------------------------------AGAGCCAGGGGGTGGAGAGCACCCCGGGCAGGGAGGAGGG i rheMac3.chrUn_JH291127 I 13 I 40 s papAnu2.chr2 187292149 370 + 187378091 gcccccgtgcccgTCCCGCCTGAGAAAGGTGAGTGAGGCCGTACAGGTGAGACA------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTTTTGAGCGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-T-CCCACAGTCTCTGCTCTTTCGGGTCGGGAGGGCCTTACTGAGGACAGGGACACAGCATCGGAGTC-GCTGCTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATGACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGTC-------------TGGTAGAGGCGGTTAGAGGACTTGTGCCAGGGTCTAAGCACACACAATGGAAAGCCCTAaggaaggc-----------------------------------------------agagccgggggatggagagcaccccgggcagggaggaggg i papAnu2.chr2 I 6 I 13 s chlSab2.chr15 91320638 370 + 91754291 GCCCCCGTCCCCGTCCCGTCTGAGAAAGGTGAGTGAGGCCGTGCAGGTGAGACA------------------------------------------------------------------------------------------------------------------------TGTG-------------------------------------------CGTTTTGAGCGGTGACGTAACTGATGGCTCCCTCTCAGCCTGCT-T-CCCACAGTCTTTGCTCTTTCGGGTCGGGAGGGCCTTACTGAGGACAGGGACACAGCATCGGAGTC-GCTGCTGAGGGCTGGCTTTGTGCATGGCACTGGGCCAGGGGCTGGAGACAGAGAAATGACCCTGGTGCCATTCAGCAAGGGACAGATGGACTGTC-------------TGGTAGAGGTGGTTAGAGGACTCGTGCCAGGGTCTAAGCGCACACAATGGAAAGCCCTAAGGAAGGC-----------------------------------------------AGAGCCCGGGGGTGGAGAGCACCCCGGGCAGGGAGGAGGG i chlSab2.chr15 C 0 I 13 s calJac3.chr17 73794677 327 + 74750902 GCCCCCGTCCCCATCCCGTCTGAGAAAGGTGAGTCATGCTGTAGAGGTGTGCCC------------------------------------------------------------------------------------------------------------------------CATG-------------------------------------------CCTTTTGAGGGGTGACATAACTAAAGGTTGCTTCTCAGCCTGCTGG-CCCATGGTCTCTGCGCTCTTGGGTGGGAAGGGCCTTACCGAGGACAGGGAGACAGCATCAGAGTC-GCTGCTGAGGGCTGGCTTTGT------------GCCTGGAGCTAGAGACAGAGAAATGACCCTAGTGCCATTCAGCAAGGGGCAGAT-CACTATC-------------TGGTAGAGGCAGTTAGAGGATTAATCCCAGGGCATAAGCACACACAATGGAAAACGC------------------------------------------------------------------------------CTCAGGGCAGGGAGGAGGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2292453 569 - 31377067 GCCCCAGTCCCCATCAAGCCAGAGAAAGGTAAATGTCCCTGGAGAGGTGGGGTCCCTCCACTCTGGGATATAGAGATCTGAGCTAGATGTGGATGCTGTAGTTTTGGCAGCTCGATTAGATCTACCAGTGAGGGCTCTTTTGGGGGAGCAGGGGGAGCTGGTTCTGTGGGTATGTGTGCTGCCTCCTCTGGGCCATCGGTAGTCCAGCTGCTCCCCTACCCCCTTTAGAGGGGAGATGGAACTGAAGACT-CGTCTCAGCCCGCC-TGCTCATAG-----ACTCTCTCGGGTCGTCAACTCC-CACAGTGGGCTATGGGACAGCATCAGAGTTGGGTGCGGAGGGCTGGCTCTGTACATGGCACCAGGCTGGGAGGTGG----AGAGAAGTGACCACGGTACTGTTTAGTAAGAGACGGACCTGCTGCC------------TTGATAGGTGCGATTAGAGGAATAAATGCAGGGTATTAG---ACACAATGGAAGGTCCCAGGGGAGGTCGGGGTATGCTCAAGGCGAAGAGGCGGCTTCCTGGAAAGAATGAATAGGAGCTGGAGAAGGAGAAGCATCCCAAGGAGGCAAGAGGG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2536079 1364 - 202329955 M a score=10142.000000 s hg38.chr3_KI270937v1_alt 16771 10 + 165607 CGGGAACAGC s nomLeu3.chr11 2781640 10 - 123690457 CAGGAACAGC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187292532 10 + 187378091 cgggaACAGC i papAnu2.chr2 I 13 C 0 s chlSab2.chr15 91321021 10 + 91754291 CGGGAACAGC i chlSab2.chr15 I 13 C 0 s calJac3.chr17 73795004 10 + 74750902 CGGGAACAGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2293022 10 - 31377067 CTTGAAGAAC i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e panTro4.chr3 2536079 1364 - 202329955 M a score=12360.000000 s hg38.chr3_KI270937v1_alt 16781 17 + 165607 TGGAACAAAGGTGTGGA s papAnu2.chr2 187292542 17 + 187378091 TGGAACAAAAGTGCGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321031 17 + 91754291 TGGAACAAAAGTGCGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795014 17 + 74750902 TGGAAGGAAGGTGTGGA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2293032 17 - 31377067 TGGAATAAAAGTGTAGA i canFam3.chr33 C 0 I 17 e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro4.chr3 2536079 1364 - 202329955 M a score=4218.000000 s hg38.chr3_KI270937v1_alt 16798 8 + 165607 AGGTATGG s papAnu2.chr2 187292559 8 + 187378091 AGGTATGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321048 8 + 91754291 AGGTATGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795031 8 + 74750902 AGGCATGG i calJac3.chr17 C 0 I 3 e canFam3.chr33 2293049 17 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro4.chr3 2536079 1364 - 202329955 M a score=499.000000 s hg38.chr3_KI270937v1_alt 16806 5 + 165607 GTGTG s papAnu2.chr2 187292567 5 + 187378091 CCATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321056 5 + 91754291 CCGTG i chlSab2.chr15 C 0 C 0 e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro4.chr3 2536079 1364 - 202329955 M a score=0.000000 s hg38.chr3_KI270937v1_alt 16811 883 + 165607 GAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTG e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro4.chr3 2536079 1364 - 202329955 M a score=89552.000000 s hg38.chr3_KI270937v1_alt 17694 1046 + 165607 TGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGCGGAAGGTATGGGTGTGGAAGGTATGGGTGCGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGCGGAAGGTATGGGTGTGGAAGGTATGGGTGCGGAAGGTATGGGTGCGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAG-TTATGGCCGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATG s panTro4.chr3 2537443 1046 - 202329955 TggaaggtatgggtgtggacggtaagggtgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatggctgtggaaggtatgggtgtggaaggtatgagtgtggaaggtatgagtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgcgtgtggaaggtatgagtgtggaaggtatgggtgtggaaggtatgagtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatggatgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatggccgtggaaggtatggatgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgagtgtggaaggtatgagtgtggaaggtatgagtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatggatgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatgggtgtggaaggTATGAGTGTGGAAGGTATGGCCGTggaaggtatgggtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtatgagtgtggaaggtatgagtgtggaaggtatgagtgtggaaggtatgggtgtggaaggtatgggtgtggaaggtaagggtgtggaaggtatggatgtggaaggtatgggTGTGGAACGTATGGGTGTGGAAGGTATGGATGTGGAAGGCTCCGCACGTGGAAGGTATGGATGTGGAAGGTATGGGTGT-GAAGGTATG i panTro4.chr3 M 1364 M 696 e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C a score=0.000000 s hg38.chr3_KI270937v1_alt 18740 158 + 165607 ACTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGA e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781650 0 - 123690457 C e panTro4.chr3 2538489 696 - 202329955 M a score=1718.000000 s hg38.chr3_KI270937v1_alt 18898 25 + 165607 AGGTATGACCGTGGAAGGTATGGCC s nomLeu3.chr11 2781650 25 - 123690457 AGATATGCCCGTCGAAGGTACGGCC i nomLeu3.chr11 C 0 I 1 e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e panTro4.chr3 2538489 696 - 202329955 M a score=0.000000 s hg38.chr3_KI270937v1_alt 18923 270 + 165607 GTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTAAGGGTGTGGAAGGTATGGATGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATCGGTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGACT e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e nomLeu3.chr11 2781675 1 - 123690457 I e panTro4.chr3 2538489 696 - 202329955 M a score=13292.000000 s hg38.chr3_KI270937v1_alt 19193 170 + 165607 GTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGCTGTGGAAGGTATGGGTGTGGAAGGTATGACTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTATGGGTGTGGAAGGTACGAGTGTGGT s nomLeu3.chr11 2781676 170 - 123690457 GTGAAAGGTATGTCCGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGTCCGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTATGGGTGTGGAAGGTATGGCCGTGGAAGGTACGAGTGTGGT i nomLeu3.chr11 I 1 C 0 e calJac3.chr17 73795039 3 + 74750902 I e canFam3.chr33 2293049 17 - 31377067 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 56992 40 - 111706 I e panTro4.chr3 2538489 696 - 202329955 M a score=3267.000000 s hg38.chr3_KI270937v1_alt 19363 13 + 165607 AGGTATGGCTGCA s nomLeu3.chr11 2781846 13 - 123690457 AAGTATGGCTGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57032 13 - 111706 AGGTATGGCGGTG i rheMac3.chrUn_JH291127 I 40 C 0 s canFam3.chr33 2293066 13 - 31377067 AAGTGTAGACATG i canFam3.chr33 I 17 C 0 e calJac3.chr17 73795039 3 + 74750902 I e chlSab2.chr15 91321061 0 + 91754291 C e papAnu2.chr2 187292572 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=10100.000000 s hg38.chr3_KI270937v1_alt 19376 13 + 165607 GAAAGTCGTCCCG s nomLeu3.chr11 2781859 13 - 123690457 GAAAATCGTCTCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57045 13 - 111706 GAAAGTGGACCCG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187292572 13 + 187378091 GAAAGTGGACCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321061 13 + 91754291 GAAAGTGGACCCG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2293079 13 - 31377067 AAAAGGAGTCCCA i canFam3.chr33 C 0 C 0 e calJac3.chr17 73795039 3 + 74750902 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=109230.000000 s hg38.chr3_KI270937v1_alt 19389 92 + 165607 GTGCTGCATGGGG-GTGGATCCCCGAAGCATTTGGGGTGGCTGAAAATGAGAAGAAGGGTAGCAAAAAGTGCGGCCGGCATGCGGGGAATCCT----- s nomLeu3.chr11 2781872 93 - 123690457 GTGCTGCATGGGGAGCAGATCCCCGAAGCATTTGGGGTGGCTCGAAATGAAAAGAAGGGTAGCAAAAAGTGCGGCCGGCATGCGGGGCACCCT----- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57058 89 - 111706 GTGCTGCATGGGGAGCGGATCCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAGAGGAGCAAAAAGTGCGGCCAGCATGC----AATCCT----- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187292585 89 + 187378091 GTGCTGCATGGGGAGTGGATCCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAGAGGAGCAAAAAGTGCGGCCAGCATGC----AATCCT----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321074 89 + 91754291 GTGCTGCATGGGGAGTGGATCCCCGAATCATTTGGGGTGGCTGAAAATGAGAACAAGAGGAGCAAAAAGTGCGGCCAGCATGC----AATCCT----- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795042 90 + 74750902 GTCCTGCATGGGGAGGGGAGCCCCAAAGCATTTGGGGTTGCTGAAAATGAGAAGAAGAGGAGC--AAAGTGCGGCTGGCATGC-GGGAATCCT----- i calJac3.chr17 I 3 C 0 s canFam3.chr33 2293092 92 - 31377067 GTATTGCATGGGGAGGAGACCCCCAAGACACTTGGGGGTG-TGGAAACCAGGTGAAGAAT-GTTGAGAATGAGGCCGTCATGT----GATACAATCAG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=338761.000000 s hg38.chr3_KI270937v1_alt 19481 266 + 165607 GTAGGCAACGGGAGCCAGGGAGGACTCAGTTTTGCATTGTACAAATGGCATTTAACAAGTGGTGCCTGGAG---CGGTCCGATTTGCAGG------------------CAGTGAGGAGGCCAGGAGAG-CCTGCGGGTT---------TCCAAGCAGGACCAGGGGAGGGCGCC--------AAGGAGTCGGCAGCTGCGAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGGCCTCTAGGGAGTCCTAGGTTAAATTGGAGG----------AGTCTTCAAGTTTATCTGGAGAAAGGCCGTCTT s nomLeu3.chr11 2781965 265 - 123690457 GTAGGTAAGGGGAGCCTGGGAGGACTCAGTGTTGCATTGTACAAATGGCATTTAACAAGTGGTGCCTGGAG---TGGTGAGATTTGCAGG------------------CAGTGAGGAGGCCAGGAGAG-CCTGCAGGAT---------TCCAAGCAGGACCAGGGGAGGGTGCC--------AAGGAGTCGGCAGCTGGGAGAAATATTTGGGACAAGGTTTCTCAAACTGGAGCCCGAGGACCTCTAGGGAGTTATAGGTTAAATTCGAGG----------AGTCCTCAAGTTTATCTGGAGAAAGGCCAG-TT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57147 264 - 111706 GTAGGTAAGGAGAGCCAGGGAGGACT--GTTTTGCATTGTACAAATGGCATTTAACAAGTGGTGCCTGCAG---CGGCCAGATGTGCAGG------------------CAGCGACGAGGCCAGGAGAG-CCTACAGGAT---------TCCAAGCAGGACCAGGGGAGGGCCCC--------AAGGAGTCGGCAGCTGCGAGAAATATTTGGGACCAGGTTTCTCAAACCGGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAGG----------AGTCTTCACGTTTAACCGGAGAAAGGCCATCTT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187292674 264 + 187378091 GTAGGTAAGGAGAGCCAGGGAGGACT--GTTTTGCATTGTACAAATGGCATTTAACAAGTGGTGCCTGCAG---CGGCCAGATGTGCAGT------------------CAGCGACGAGTCCAGGAGAG-CCTACGGGAT---------TCCAAGCAGGACCAGGGGAGGGCCCC--------AAGGAGTCGGCAGCTGCGAGAAATATTTGGGACAAGGTTTCTCAAACCGGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAGG----------AGTCTTCAAGTTTAACCGGAGAAAGGCCATCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321163 264 + 91754291 GTAGGTAAGGAGAGCCAGGGAGGACT--GTTTTGCATTGTACAAATGGCATTTAACAAGTGGTGCCTGCAG---TGGCCAGATGTGCAGG------------------CAGCGACCAGGCCAGGAGAG-CCTACGGGAT---------TCCAAGCAGGACCAGGGGAGGGCCCC--------AAGGAGTCGGCAGCTGCGAGAAATATTTGGGACAAGGTTTCTCAAACCCGAGCCCAAGAACCTCTAGGGAGTCCTAGGTTAAATTCGAGG----------AGTCTTCAAGTTTAACCGGAGAAAGGCCGTCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795132 252 + 74750902 GGAGGTAAGGAGCGCCAGGGAGGACT----CCTGCATTTTACAAATGGCACC-------CTGTGGCTGGAG---TGGTCAGATTTGCAGG--------------------GTGAGGAGGCCAGGAAAG-CCTGCGGGAT---------TCCAGGCAGGACCAGGGGAGGGCGCC--------AAGGAGTCAGCAGCTGTGAGAATTGTTTGGGACAGGGTTTCTCAAACTGGAGCCTAAGGACCTCTAGGGCGGCCTAGGCTAAATTCGAGG-----------GTCTTTAAGTTTCTCTGGAGAAATGCCATCTT i calJac3.chr17 C 0 C 0 s mm10.chr16 32758571 270 + 98207768 GTGGGTAAGG-GAATCAGGGAGGATACAGATCTGCAC--------------------AGTGGTGGCTGGTA---TGGATAAACCTGGATGGTCAATCGAGGGAGGCATCAGTGAGGAAGCCAAGAGA---CTGTGCTAA---------GCCAATCAAGGCCA-TGTAGTATATA--------TAGAGTTAGATCCATGTGGGAAACACTTAAGACATAGTTTCCCAAACTGGAATCTGAGGACATACAGGGTGGCCTTGGGCAATTCCGGGGTGGGTGGGAGTGTCTTCAAGTTTATCTGAAGAAGTACCGCTGT i mm10.chr16 N 0 C 0 s canFam3.chr33 2293184 264 - 31377067 --------GTAGGACCCGGCCAGGTTTATACTTGGATGGTGC---------------CGTGGTGGGTGGGGTGTTGGGTGAATTTCCAGG--------------------------AGGCCGAGTGGGCCCTATGAGATGCGGTGGTATCCAGGCC--AACAGGGAGGGCTGCCAAGAACGAAAGGGGGAGACTCGTTTGAGAAATATTTAAGACAAGCTTTCTCAAGCTAGAACCCAAGGACATCTGAGGGGTCCAAGGACAAATTCGGGCGGGGGAGGGGTATCTACCCGTGTATCTGGACAAATACCGACTT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=84335.000000 s hg38.chr3_KI270937v1_alt 19747 63 + 165607 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGCAGTTACTCATCTTCATTGCGCTGGACtt s nomLeu3.chr11 2782230 63 - 123690457 AGGAAACAAGTCTCATTCCCTGAAAAGGGCTTTGCAGTTGCTCATCTTCATTGCGCTGCACtt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57411 63 - 111706 AGGAAGCAAGTCTCATTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGCACTGGACtt i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187292938 63 + 187378091 AGGAAGCAAGTCTTATTCCCTGAAAAGGGTTCTGCAGTCACGAATCTTCACTGCACTggactt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321427 63 + 91754291 AGGAAGCAAGTCTCATTCCCTGAAAAGGGCTCTGCAGTCACGAATCTTCACTGCACTGGACtt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795384 62 + 74750902 AGGAAACAAGTCTCGTTTCCTGAAAAGGACT-TGCAGTTTCTCATCTTCACTGTGTTGGGCTT i calJac3.chr17 C 0 I 20 s mm10.chr16 32758841 62 + 98207768 AGGAAATAGGTGTCATTTTATGAAAAGGTCTTTA-AGTGACTAGTCTTTGCTGTTTTGGAGTT i mm10.chr16 C 0 C 0 e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=209.000000 s hg38.chr3_KI270937v1_alt 19810 17 + 165607 ttgtcta--tttttttttt s nomLeu3.chr11 2782293 19 - 123690457 ttgtcttcttttttttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57474 15 - 111706 ttgtcat----tttttttt i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293001 13 + 187378091 ttgtca------ttttttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321490 9 + 91754291 ttgtca----------ttt i chlSab2.chr15 C 0 C 0 s mm10.chr16 32758903 17 + 98207768 TCGTCTTTTCGCCCTTT-- i mm10.chr16 C 0 I 24 e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=52189.000000 s hg38.chr3_KI270937v1_alt 19827 70 + 165607 tttttttgagatggagttttcgctcttgttgcccaggctggagtgcagtggcgcgatctcagctcactgg s nomLeu3.chr11 2782312 70 - 123690457 tttttttgagacggagtttccgttcttgttgcccagactggagtgcaatggcgcgatctcagctcactgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57489 69 - 111706 tttttttgaaacggagggtt-gctcttgtcgcccaggctggggtgcagtggagcaatcttggctcactga i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293014 69 + 187378091 tttttttgaaacggagggtt-gctcttgtcgcccaggctggagtgcagtggagcaatcttggctcactga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321499 69 + 91754291 tttttttgaaacggagggtt-gctcttgtcgcccaggctggagtgcagtggagcaatcttggctcactga i chlSab2.chr15 C 0 C 0 e mm10.chr16 32758920 24 + 98207768 I e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2538489 696 - 202329955 M a score=85558.000000 s hg38.chr3_KI270937v1_alt 19897 68 + 165607 aacctcagcctcccgggttcaagcaattctcctgcctcagcctcccgagtggctgggattacaggcat s panTro4.chr3 2539185 68 - 202329955 aacctcagcctcccgggttcaagcgattctcctgcctctgcctcccgagtggctgggattacaggcat i panTro4.chr3 M 696 C 0 s nomLeu3.chr11 2782382 68 - 123690457 aacctccgcctcctgggttcaagcaattctcctgcctcagcctccggagtagctgggattacaggcga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57558 68 - 111706 aacctccacctcccgggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgt i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293083 68 + 187378091 aacctccacctcccgggttcaagagattctcctgcctcagcctcccgagtagctgggattacaggcat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321568 68 + 91754291 aacctccacctcccgggttcaagagattctcctgcctcagcctcccgagtagctgagattacaggcgc i chlSab2.chr15 C 0 I 132 e mm10.chr16 32758920 24 + 98207768 I e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M a score=-282.000000 s hg38.chr3_KI270937v1_alt 19965 1 + 165607 g s panTro4.chr3 2539253 1 - 202329955 g i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2782450 1 - 123690457 a i nomLeu3.chr11 C 0 I 3 s rheMac3.chrUn_JH291127 57626 1 - 111706 c i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293151 1 + 187378091 g i papAnu2.chr2 C 0 C 0 e mm10.chr16 32758920 24 + 98207768 I e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e chlSab2.chr15 91321636 132 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=220839.000000 s hg38.chr3_KI270937v1_alt 19966 200 + 165607 cgccaccacacccggctaatttttgtattttaagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcgtgatcctcccgcctcagcct-cccaaagtgctgggattacaggcgtgagccaccgcacccagcATAGACTTTTGTCTTTTAACCCTGAAAAGGATTGAG----ACTAAGAGATTGAGA s panTro4.chr3 2539254 200 - 202329955 cgccaccacactcggctaatttttgtattttaagtagagacagggcttctccattttggtcaggctggtctcgaactcctgacctcgtgatcctcctgcttcatcct-ctcaaagtgctgggattacaggcgtgagccactgcacccagcATGGACTTTTGTCTTTTAACCTTGAAAAGGACTGGG----ACTAAGAGATTGAGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2782454 202 - 123690457 cgccaccacgcccggctaatttttgtattttaagtagagacagggcttctccatgttggtcaggctggtctcgaactcctgacctcatgatcctcctgcctcagcct-cccaaagtgctgagattacaggcgtgagccaccgcgcccggcATGGGCTTTTGTCTTTTAACCCTGAAAAGGATTGGGGT--ACTAAGAGATTGAGA i nomLeu3.chr11 I 3 C 0 s rheMac3.chrUn_JH291127 57627 205 - 111706 caccaccacaccaggctagtttttgtatttttagtagagacgaggtttctccatcttggtcaggctggtctcgaactcctgacctcgtgatccacccgcctcggcctaccaaaagttctgggattacaggcgagagccaccgcgtccgTCATGGACGTTTGTCATTTAACCCTGAAAAGGATTGGGACTACCTAAGAGATGGCGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293152 183 + 187378091 cgccaccacaccaggctagtttttgtatttttagtagagacgaggtttctccatgttggtcaggctggtctcgaactcctgacctcgtgatccacccgcctcggcct-cccaaagttctgggattacaggcgagagccacc---------------------caTTTAACCCTGAAAAGGATTGGGACTACCTAAGACATGGCGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321768 204 + 91754291 cgccaccacgcctggctaatttttgtatttttagtagagacgaagtttctccatgttggtcaggctggtctcgaactcctgacctcgtgatccacccgcctcggcct-cccaaagttctgggattacaggcgagagccaccgcgtccgCCATGGACGTTTGTCATTTAACCCTGAAAAGGATCGGGGCTACCTAAAAGATGGCGA i chlSab2.chr15 I 132 C 0 e mm10.chr16 32758920 24 + 98207768 I e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M a score=22005.000000 s hg38.chr3_KI270937v1_alt 20166 15 + 165607 ATCGTTTGCTGGTAT s panTro4.chr3 2539454 15 - 202329955 ATCGTTTGCTGGTAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2782656 15 - 123690457 ATCGGTTGCTGGTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57832 15 - 111706 ATCGTTTGCTGGTAT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293335 15 + 187378091 ATCGTTTGCGGGTAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321972 15 + 91754291 ATCGTTTGCTGGTAT i chlSab2.chr15 C 0 C 0 s mm10.chr16 32758944 15 + 98207768 ATCCTATGGTGCTAT i mm10.chr16 I 24 C 0 e calJac3.chr17 73795446 20 + 74750902 I e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M a score=351385.000000 s hg38.chr3_KI270937v1_alt 20181 231 + 165607 TCTGACAGCAGGA----CCTGTT---TTTCTCCAAGCTGGGGAAGGATGAGAGGCGCAGTTTAGGGAGTAAAATGACCACATGCATTTAATGTGGGTGGAGAGGGAGCGAGAAGC-----ACCCTAGATGGCT----------GCCTCTGGGGCCCTCGGGGAACACAGGACAGGTGT-GGGCAGCCTGCAGGGAGCGCTCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTTCCTGCTC s panTro4.chr3 2539469 231 - 202329955 TTTTATTTCAGAA----CCTGTT---TTTCTCCAAGCTGGGGAAGGATGAGAGGCGCAGTTTAGGGAGTAAAATGACCACATGCATTCAATGTGGGTGGAGAGGGAGTAAGAAGA-----ACCCTCGATGGCT----------GCCTCTGGGGCCCTCGGGGAACACGGGACAGGTGT-GGGCAGCCTGCGGGGAGCGATCTGGGATCCCTTTCAGCCCTAAAGAAGGCCCAGGCCCACTTGGACTTCCTGCTC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2782671 231 - 123690457 TCTGACAGCAGGA----CCTGTT---TTTCTCCAAGCTGGGGAAGGATGAGAGGCGCAGTTTAGGGAGTAAAATGACCACATGCATTCAGTGTGGGTGGAGAGGGAGCAACAAGA-----ACCCTCGATGGCT----------GCCTCTGGGGCCCTCGGGGAACAGGGGACAGGTGC-GGGCAGTGTGCGGGGAGCACTCTGGGATCCCTTTCAGCCCTAAAGCAGGCCCAGGCCCACTTGGGCTTCCTGCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 57847 228 - 111706 TCTGCCAGCAGGA----CCTGTT---TTCCTCCGAGCTGGGGAAGGATGAGAGGCGCAGTTC-GGGAGTAAAATGACCACATGCGTTCAGTGTGGGTGGAGAGGGAGCCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTCGGGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGGGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGTCCTGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293350 228 + 187378091 TCTGCCAGCAGGA----CCTGTT---TTTCTCCGAGCTGGGGAAGGATGAGAGGCGCAGCTC-GGGAGTAAAATGACCCCATGCGTTCGGTGTGGGTGGAGAGGGAGCCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTCGGGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGCGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCGGGCCCCCTCGGACGTCCTGCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91321987 227 + 91754291 TCTGCCAGCAGGA----CCTGTT---TTCCTCCGAGCTGGGGAAGGATGAGAGGCGCAGTTC-GGGAGTGAAATGACCACATGCGTTCGGTGTGGGTGGAGAGGGAGCCACAAGA-----GCCCTTGCTGGCT----------GCCTCTGGGGCCCTC-GGGAAC--GGGGCAGGTGC-GCGCAGCGCGCGGGGAGCGCTCTGGGATCCCTTTCGGCCCTAAAGAAGGCCCAGGCCCCCTCGGACGTCCTGCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795466 225 + 74750902 TCTGACAGCAGGA----CCTGTT---TTTCTCCAAGCTGGGGAAGGATGCCAGGCACAGTGTAGGGAGTAAAATGACGGCGTGCGCTCAACGCGGGTGGAGAGGGAGC---AAGA-----ACCCTGGATGGCTGGCTGGCAGGGCCTCTGGGGCCATCGGGGTGGAGAGGGCAGGTGCGGGGCAGCGTG--GGGGGGTCTCTGGGATCCCTTCCA------------GCCCAGGCCCACTTGGACGTCCTGCTC i calJac3.chr17 I 20 C 0 s mm10.chr16 32758959 207 + 98207768 CCTAACAGCAGGACGGTCATGTCAGGATGCTCTAACCTGAGGGATGATGAGGGTTCCAGCTG-AGAAGTAAACAGA--------------TGTGTATGGAGAGGTGGAACGAAGAGTAAGGTCTACGGGAGTT----------GCTTCT-----------GAAAGAGGAGACAGGTTA-GG----------GGAAGCTCTCTCAGGGTCCTCCTGAACCTGAAAGGAGGGATGACCCTCAAGGACTCTGCTCTC i mm10.chr16 C 0 C 0 e canFam3.chr33 2293448 0 - 31377067 C e macFas5.chr2 192362332 14732 - 192460366 M a score=527621.000000 s hg38.chr3_KI270937v1_alt 20412 295 + 165607 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGGAGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACTGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTC-C----GGGCTGCGGCCCG------------CGCAGCCTGAACTCCCAG-------GGC-CCACTTCTCTCTCCTG--CTTCGAGACGG------------------AACCCAGAGGAAGCGGGAATGGAAGCAGC---------CTTGGCTGGGCCCC-----TCGTCCATCCCC----ACAGCCTCC-TTAATGTCAG s panTro4.chr3 2539700 295 - 202329955 TTCTCTGTC---CTGGCCCAGGAGTTTCCCTCTTCCCCTATGGGGCAGGCGCCGGGGACCTGAAGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCACTCTTCAAGCCGGCGACAGGCTTCCCCCTTGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTC-C----GGGCTGCGGCCCG------------CGCAGCCTGAACTCCCCG-------GGC-CCACTTCTCTCTCCTG--CTTCGAGATGG------------------AACCCAGAGGCAGAGGGAATGGAAGCAGC---------CTTGGCTGGGCCCC-----TCGTCCACCCCC----GCAGCCTCC-TTAATGTCAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2782902 280 - 123690457 TT------------------GGAGTTTCCCTCTTCCCCTACGGGGCAGGCACCGGGGACCTGGAGTTCGTCAGGAGGACTGTGGACTTCACCTCCCCACTCTTCAAGCCAGCGACTGGCTTCCCCCTCGGCTCCTCTCTCCGTGATTCCCTCTACGTGAGTC-T----GGGCTGCGGCCTA------------TGCGGCCTGAGCTCCCTG-------GGC-CCACTTCTCTCTCCAG--CTTGGAGATGG------------------AACCCAGAGGAAGCGGGAGTGGAAGCAGC---------CTTGGCTGGGCCCC-----TCGTCCACCCCC----ACAGCCTCC-TTAATGTCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58075 281 - 111706 GTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGTCGGCGCCGGGGACCTGGAGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCTCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTCCGCGATTCCCTCTACGTGAGTC-C----CGGCGGCG---------------------GCCTCGGCTCCCTG-------GG--CCGCTTCTCTCCCCAG--CTCCGAGAC--------------------AACCCAGAGGAAGCAGGAGTGGAGGCAGC---------CTCGGCGGGGCCCC-----TCGTGCG-CCCC----ACAGCCCCC-TTAATGTCAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293578 281 + 187378091 GTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGCCGGCGCCGGGGACCTGGAGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCTCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTCCGCGATTCCCTCTACGTGAGTC-C----CGGCGGCG---------------------GCCTCAGCTCCCTG-------GG--CCGCTTCTCTCCCCAG--CCTCGAGAC--------------------AACCCAGAGGAAGCAGGAGTGGAGGCAGC---------CTCGGCGGGGCCCC-----TCGTGCG-CCCC----ACAGCCCCC-TTAATGTCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322214 281 + 91754291 TTCTTTGTC---CTGG-CCAGGAGCTTCCCTCCTCCCCTACGGGGCCGGTGCCGGGGACCTGGAGTTCGTCAGGAGGACCGTGGACTTCACCTCCCCGCCCTTCAGGCCCGCGACTGGCTTCCCCCTCGGCTCCTCGCTGCGCGATTCCCTCTACGTGAGTC-C----CGGCGGCG---------------------GCCTCAGCTCCCTG-------GG--CCGCTTCTCTCCCCGG--CTTCGAGAC--------------------CACCCAGAGGAAGCAGGAGAGGAAGCAGC---------CTCGGCGGGGCCCC-----TCGTGCG-CCCC----ACAGCCCCC-TTAATGTCAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795691 295 + 74750902 TTCTTTGTC---CTGGCCCAGGAGTTTCCCTCCTCCCCTACGGGTCGGGCGCTGGGGACCTGGAGTTCGTCAGGAGGACTGTGGACTTCACCTCCCCACTCTTCAAGCCCCTGACTGGCTTTCCCCTCGGCTCTTCTCTCCGGGATTCTCTCTATGTGAGTT-CACTGAGGCCGCA-------------------CAGCCTGAGCTCCCTG-------GGC-CCGCTTCTCTCTCCAG--CTTCAGGATGG------------------AACCC--AGGAACTGGGAGTGGAAGCAGC---------CTTGGCTGGGCCTCTAGTTTCGTTCACCTCC----ACAGCCTTC-TTACTGTCAG i calJac3.chr17 C 0 C 0 s mm10.chr16 32759166 306 + 98207768 TCCTCTGTC---CTTGTCTAGGCATTTCCCTCTTCCCCTACGGGTCTGAAGTCGGAGACCAGAATTTGTTTGCCAGGACTGTGGATTTTAACTCACCAATCTTCAAGATCCTGATTGGCTTTCCCCTCGGTTCCTCCCTGCGGGATTCCTTCTACGTGAGTCTC----TGACTGTAGCCTT--GGGTCATGTCTGTGGCCTGTGTTCTTTGTTCTTTTGGG-CCCTGTTTCTCTGCAG-------AGATGGC-------------CCATGACAGAGCAGAAGAAAGAATGAGGTCA-----------CTTTGCTGTACAAC-----ACTTTTG----------TAGCCTTCTTTTATGTCAG i mm10.chr16 C 0 I 67 s canFam3.chr33 2293448 334 - 31377067 TCCTTTGTCCTGCTGGCCCAGGCGTTTCCCTCTTCCCTTACGGGCCAAGTGTTGGAGACAGGGAGTTTGTCGAGAGGACCACGGACTTCACCTCACCACTCTTCAGGCCCCAGATTGGCTTCCTTCTTGGCTCCTCTCTCCGGGATTACCTCTATGTGAGTCCC----CAGGTGTAGACCAAAGGGCAGGACCTGTGACCTGTGCTTCCCA-------GACTCTACTTCTCTCTCTAGGGCTTGACGATGGCCCTGTGACCATGACCATGGCCCAGAGGAAGGAAGTGTGCGACAAGCAACTGGGAGCTAGGCAAGGCCCT-----CC---TACCCTCAGGGACAAGTGTC-TT-------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=51390.000000 s hg38.chr3_KI270937v1_alt 20707 49 + 165607 GCCTCTGCCTGAGGAACACAGGGTGCCAGGCGAGGGCTGCCCACCTGCT s panTro4.chr3 2539995 43 - 202329955 GCCTCTGCCTGAGGAACACCGGGTGCCAGGCGAGGGCTGCCCA------ i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2783182 49 - 123690457 GCCTCTGCCCGAGGAACACCGGGTGCCAGGCGAGGGCTGCCCACCTGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58356 47 - 111706 GCGTCTGCC-GAGGAACACGGGGCGCCAGGCGAGGGCGG-ACGCCTGCT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293859 47 + 187378091 GCCTCTGCC-GAGGAACACGGGGCGCCAGGCGAGGGCGG-ACGCCTGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322495 47 + 91754291 GCGTCTGCC-GAGGAACACGGGGCGCCAGGCGAGGGCGG-ACGCCTGCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73795986 49 + 74750902 GCCTCTGGCCGAGTAACACGGGGAGCCAGGCGAAGGCTGCCCACCTGCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2293782 30 - 31377067 TACCTTACTATAGAGGTCTCGGGGTCCAGT------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32759472 67 + 98207768 I e macFas5.chr2 192362332 14732 - 192460366 M a score=302243.000000 s hg38.chr3_KI270937v1_alt 20756 211 + 165607 GG-----------GCCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAGCTACACTTGGGAAACTGGACTGTTCCTGCCGTTTCCACCTTCTGGGATTTGTCTCTGGCCCCCTGGTCCC--------TGCCTCCTGGAGCAGAGTTGGAGGGACAGTCCTGGCTCCTGTGGCCCTGAGGG-------AGGAGGCTGAGTCCGAACACAGCATGAGAGGGCGACTGAGCGATG s panTro4.chr3 2540038 209 - 202329955 -------------ACCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAGCTACTCTTGGGGAACTGGACTGTTCCTGCCGTTTCCACCTTCTGGGATTCGTCTCTGGCCCCCTGGTCCC--------TGCCTCCTGGAGCAGAGTTGGAGGGACAGTCCTGGCTCCTGTGGCCCTGAGGG-------AGGAGGTTGAGTCCGAACACAGCATGAGAGGGCGACTGAGCGATG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2783231 205 - 123690457 GG-----------GCCCACCGCTGCTTCTGCGGGGCCTTCTC-------AGGAGTAAAAAGCTACACTTGGGAAACCAGA------CTGCCATTTCCACCTTCTGGGATTAGTCTCTGGCCCGCTGGTCCC--------TGTCTCCTGGAGCGGAGTTGGAAGGACAGTCCTGGCTCCTGTGGCCCTCAGGG-------AGGAGGCTGAGTTGGAACACACCATGAGAGGGCGACTCAGCGATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58403 205 - 111706 GG-----------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------CGGAGCAAAACGCTGCGCTTGGGAAACGGAGCTGTTCCCGCCGTGCCCGCGTTCTGGCATTAGTCTCTGGCCCCCCGGTCCC--------TGTCCCCTGGA-CGGAGTTGGAGGGGCCGTCCTGGCTCCCGCGGCCCTCAGGG--------GGAGGCTGTG---GGACGCACCATGAGAGGGCGACTCAGCAATG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187293906 193 + 187378091 GG-----------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------CGGAGCAAAACGCTGCGCTTGGGAAACGGAGCTGTTCCCGCCGTGCCCGCGTTCTGGC------CACCGccccccc---------------GTCCCCTGGAGCGGAGTTGGAGGGGCCGTCCTGGCTCCCGCGGCCCTCAGGG--------GGAGGCTGTG---GGACGCACCATGAGAGGGCGACTCAGCAATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322542 192 + 91754291 GG-----------GCCCAGCGCTGC-TCTGCGCGGCCTTCCC-------AGGAGCAAAACGCTGCGCTTGGGAAACGGAGCTGTTCCCGCCCTGCCCGCGTTCTGGC-------------CCCCTGGTCCT--------TGTCCCCTGGA-CGAAGTTGGAGGGGCCGTCCTGGCTCCCGCGGCCCTCAGGG--------GGAGGCTGTG---GGACGCACCATGAGAGGGCGACTCAGCAATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796035 219 + 74750902 GGCCCGGCCCCCAGCTCACCGCTACTTCTGCGGGGCCTTCTT-------ATGAGTAAAAAGCTAAGCTTGGGAAACTTGACTGTTCCTGTCGTTTCCATGTTCTGTGATTAGTCTCTGGCCCCCGGGTCTC--------TGTCTCCTGGAGC--AGTTGGAAGGGCAGTCCTGGCTCCTGCACCCCACAGGG-------AGGAGGCTGAG-AGGAATACACCATCAGAGGGCGACTCAATGATG i calJac3.chr17 C 0 C 0 s mm10.chr16 32759539 189 + 98207768 GG-----------GATCCTGGCTGC-TTCACAGATTTTTTTTTTTTAAACTGAGGAAGAAGCTAAGCTTAGAAACTTGATTGGTTCTCGCCATTTCTATTTCCCTGGGTTACTTCCTGATTCCCTG--------------------------------GGAACAGCAAACCTGGCTTTTCTTGCCCTCAGGG--------ACAGGAGTAG---GGACACCCAATGAGAGCTCAGCACAGTAAGG i mm10.chr16 I 67 C 0 s canFam3.chr33 2293812 223 - 31377067 -----------AAGCTCTCCACTA--TTTTCAGGGCCTTTTT-------ATGAGGAGAAAGCTCTATTTGGGAAACTG-CCTTTTAATGCTGTGTACATTTTCTATGAATGTTTCCTGGTTCCTCAGGCCAAGTAGCCGCGTCTCCTGGAGGAGAGTTGGAATGGCAGCCATGGCCCCTGCAGCCCTCAGGGGCGGGGTGGCGGGCTGAGGCAGGACACCCTAAGGTAGGGCAACACCGTGATG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=-1077.000000 s hg38.chr3_KI270937v1_alt 20967 2 + 165607 -GA s panTro4.chr3 2540247 2 - 202329955 -GA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58608 2 - 111706 -GT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294099 2 + 187378091 -GT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322734 2 + 91754291 -GT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796254 2 + 74750902 -GA i calJac3.chr17 C 0 C 0 s mm10.chr16 32759728 2 + 98207768 -GA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294035 2 - 31377067 GG- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=2100.000000 s hg38.chr3_KI270937v1_alt 20969 1 + 165607 G s panTro4.chr3 2540249 1 - 202329955 G i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58610 1 - 111706 G i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294101 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322736 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796256 1 + 74750902 G i calJac3.chr17 C 0 C 0 s canFam3.chr33 2294037 1 - 31377067 G i canFam3.chr33 C 0 I 3 e mm10.chr16 32759730 0 + 98207768 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=1365.000000 s hg38.chr3_KI270937v1_alt 20970 1 + 165607 A s panTro4.chr3 2540250 1 - 202329955 A i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58611 1 - 111706 A i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294102 1 + 187378091 A i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322737 1 + 91754291 A i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796257 1 + 74750902 A i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=300.000000 s hg38.chr3_KI270937v1_alt 20971 1 + 165607 G s panTro4.chr3 2540251 1 - 202329955 G i panTro4.chr3 C 0 C 0 s calJac3.chr17 73796258 1 + 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322738 0 + 91754291 C e papAnu2.chr2 187294103 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58612 0 - 111706 C e nomLeu3.chr11 2783436 0 - 123690457 C a score=9423.000000 s hg38.chr3_KI270937v1_alt 20972 14 + 165607 GGTGTCCACACCTG-------------- s panTro4.chr3 2540252 14 - 202329955 GGTGTCCACACCTG-------------- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58612 14 - 111706 GGTGTCTACACCTG-------------- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294103 14 + 187378091 GGTGTCTACACCTG-------------- i papAnu2.chr2 C 0 I 27 s chlSab2.chr15 91322738 14 + 91754291 GGTGTCTACACCTG-------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796259 27 + 74750902 -AGGGCTGCACCCCCCACGCCCCGAGGG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=6639.000000 s hg38.chr3_KI270937v1_alt 20986 10 + 165607 CTGAGCGATA s panTro4.chr3 2540266 10 - 202329955 CTGAGCGATA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58626 10 - 111706 CTGAGCCATG i rheMac3.chrUn_JH291127 C 0 I 6 s chlSab2.chr15 91322752 10 + 91754291 CTGAGCCATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796286 10 + 74750902 ATGAGCGATG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294117 27 + 187378091 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=1072.000000 s hg38.chr3_KI270937v1_alt 20996 7 + 165607 GAGAGAG s panTro4.chr3 2540276 7 - 202329955 GACAGAG i panTro4.chr3 C 0 C 0 s chlSab2.chr15 91322762 6 + 91754291 GAAAGA- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796296 7 + 74750902 GAGAGAC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294117 27 + 187378091 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58636 6 - 111706 I e nomLeu3.chr11 2783436 0 - 123690457 C a score=476.000000 s hg38.chr3_KI270937v1_alt 21003 1 + 165607 G s panTro4.chr3 2540283 1 - 202329955 G i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58642 1 - 111706 G i rheMac3.chrUn_JH291127 I 6 C 0 s chlSab2.chr15 91322768 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796303 1 + 74750902 A i calJac3.chr17 C 0 I 27 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294117 27 + 187378091 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=834.000000 s hg38.chr3_KI270937v1_alt 21004 13 + 165607 GTGTCCACACCTG s panTro4.chr3 2540284 13 - 202329955 GTGTCCACACCTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58643 8 - 111706 ATTTCCAC----- i rheMac3.chrUn_JH291127 C 0 C 0 s chlSab2.chr15 91322769 8 + 91754291 ATTTCCAC----- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796331 10 + 74750902 -GCTCCACCCC-- i calJac3.chr17 I 27 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294117 27 + 187378091 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=30595.000000 s hg38.chr3_KI270937v1_alt 21017 30 + 165607 CTGAGCGATGGCGAGAGGGTGTCCACACCT s panTro4.chr3 2540297 30 - 202329955 ATGAGCAATGGAGAGAGGGTGTCTACACCT i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58651 30 - 111706 CCGAGCGATGGAGAGAGGGTGTCTACACCC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294144 30 + 187378091 CCGAGTGATGGAGAGAGGGTGTCTACACCC i papAnu2.chr2 I 27 C 0 s chlSab2.chr15 91322777 30 + 91754291 CCGAGCGATGGAGAGAGGGTGTCTACACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796341 27 + 74750902 CTGAGTGATAGAGAGAG---ATCTCCACCC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=38.000000 s hg38.chr3_KI270937v1_alt 21047 1 + 165607 G s panTro4.chr3 2540327 1 - 202329955 G i panTro4.chr3 C 0 C 0 s calJac3.chr17 73796368 1 + 74750902 A i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322807 0 + 91754291 C e papAnu2.chr2 187294174 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58681 0 - 111706 C e nomLeu3.chr11 2783436 0 - 123690457 C a score=11781.000000 s hg38.chr3_KI270937v1_alt 21048 10 + 165607 CTGAGCGATG s panTro4.chr3 2540328 10 - 202329955 CTGAGCAATA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58681 10 - 111706 CCGAGCGATG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294174 10 + 187378091 CCGAGCGATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322807 10 + 91754291 CTGAGCGATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796369 10 + 74750902 CTGAGCAATG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=8848.000000 s hg38.chr3_KI270937v1_alt 21058 15 + 165607 GCGAGAGGGTGTCCA s rheMac3.chrUn_JH291127 58691 15 - 111706 GAGAGAGGGTGTCTA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294184 15 + 187378091 GAGAGAGGGTGTCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322817 13 + 91754291 --GAGAGGGTGTCTA i chlSab2.chr15 C 0 I 36 s calJac3.chr17 73796379 15 + 74750902 GAGAGAGACACTCCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=7914.000000 s hg38.chr3_KI270937v1_alt 21073 37 + 165607 CACCTGCTGAGCGATGGCGAGAGGGTGTCCACACCTG s rheMac3.chrUn_JH291127 58706 35 - 111706 CACCC-CCGAGCGATGGAGAGAGGGTGTCTACACCC- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294199 33 + 187378091 CACCC-CTGAGTGATGGAGAGAGGGC-TCCAC-CCC- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796394 33 + 74750902 -CCCC-CTGAGTGATGGAGAGAGACACTCCAC-CCC- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322830 36 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=27492.000000 s hg38.chr3_KI270937v1_alt 21110 61 + 165607 CTGAGCGATAGAGAGAGGGTGTCCACACCTGCTGAGCGATGGCGAGAGGGTGTCCACACCT s rheMac3.chrUn_JH291127 58741 57 - 111706 CTGAGTGATGTAGAGATGATGTCTACGCACCT-GAGTGATG--GAGAGGGTGTCTAAAAT- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294232 60 + 187378091 CTGAGTGATGGAGAGAGGGTGTCTACACCCCC-GAGTGATGGAGAGAGGGTGTCTACACCC i papAnu2.chr2 C 0 T 118 s chlSab2.chr15 91322866 59 + 91754291 CTGAGTGATG--GAGAGGGTGTCTACACCCCCTGAGTTATGGAGAGAGGGTGTCTACACCC i chlSab2.chr15 I 36 C 0 s calJac3.chr17 73796427 56 + 74750902 CTGAGTGATGGAGAGAG---ATCTCCACCCCCTGAGTGATGGAGAGAGAGC-TCCACACC- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=-125.000000 s hg38.chr3_KI270937v1_alt 21171 1 + 165607 G s rheMac3.chrUn_JH291127 58798 1 - 111706 C i rheMac3.chrUn_JH291127 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e calJac3.chr17 73796483 0 + 74750902 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322925 0 + 91754291 C e papAnu2.chr2 187294292 118 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=1422.000000 s hg38.chr3_KI270937v1_alt 21172 2 + 165607 CT s rheMac3.chrUn_JH291127 58799 2 - 111706 CT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294174 2 + 187378091 CC i papAnu2.chr2 T 118 C 0 s chlSab2.chr15 91322925 2 + 91754291 CT i chlSab2.chr15 C 0 T 148 s calJac3.chr17 73796483 2 + 74750902 CT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=11941.000000 s hg38.chr3_KI270937v1_alt 21174 16 + 165607 GAGCGATAGAGAGAGG s rheMac3.chrUn_JH291127 58801 16 - 111706 GAGTGTTGGAGCGAGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294176 16 + 187378091 GAGCGATGGAGAGAGG i papAnu2.chr2 C 0 T 88 s chlSab2.chr15 91322779 16 + 91754291 GAGCGATGGAGAGAGG i chlSab2.chr15 T 148 C 0 s calJac3.chr17 73796485 16 + 74750902 GAGTGATGGAGAGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=2296.000000 s hg38.chr3_KI270937v1_alt 21190 4 + 165607 GTGT s rheMac3.chrUn_JH291127 58817 4 - 111706 GTGT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294104 4 + 187378091 GTGT i papAnu2.chr2 T 88 C 0 s chlSab2.chr15 91322795 4 + 91754291 GTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796501 1 + 74750902 ---T i calJac3.chr17 C 0 T 198 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=41648.000000 s hg38.chr3_KI270937v1_alt 21194 98 + 165607 CCACACCTGCTGAGCGATGGAGAGAGGGTGTCCACACCTGCTGAGTGATAGAGAGAGGGTGTCCACACCTGCTGAGCGATGGAGAGAGGGTGTCCACA s rheMac3.chrUn_JH291127 58821 93 - 111706 CTACACCC-CAGAGTGATGGAGAGAG---GGCTCCACCCCCTGAGTGATGTAAAAACGGAGTCTACACCC-CTGAGTGATGGAGAGAGGGTGTCTACA i rheMac3.chrUn_JH291127 C 0 T 278 s papAnu2.chr2 187294108 93 + 187378091 CTACACCTGCTGAACCATGGAGAGAG---ATTTCCACACCC-GAGTGATGGAGAGAGGGTGTCTACACCC-CCGAGCGATGGAGAGAGGGTGTCTACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322799 90 + 91754291 CTACACCC-CTGAGCGATGGAGAGGG--TGTCTACACCCCCTGAGTTATGGAGAGAGGGTGTCTACACCC-CTGAGTGATG--GAGAGGGTGTCTA-- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796304 85 + 74750902 CTCCACCCCCTGAGTGATGGGGAGAG---AGCTCCACCCCCTGAGTGATAGAGAGAG---ATCTCCACCCACTGAGCAATGGAGAGAGACA------- i calJac3.chr17 T 198 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=300.000000 s hg38.chr3_KI270937v1_alt 21292 1 + 165607 C s papAnu2.chr2 187294201 1 + 187378091 C i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796389 1 + 74750902 C i calJac3.chr17 C 0 T 86 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322889 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58914 278 - 111706 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=403.000000 s hg38.chr3_KI270937v1_alt 21293 11 + 165607 CTGCTGAGTGA s papAnu2.chr2 187294202 10 + 187378091 CC-CTGAGTGA i papAnu2.chr2 C 0 I 2 e mm10.chr16 32759730 0 + 98207768 C e calJac3.chr17 73796390 86 + 74750902 T e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322889 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58914 278 - 111706 T e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540338 0 - 202329955 C a score=4176.000000 s hg38.chr3_KI270937v1_alt 21304 9 + 165607 GAGAGAGGT s panTro4.chr3 2540338 9 - 202329955 GAGAGAGGT i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58636 9 - 111706 GAGAGAGAT i rheMac3.chrUn_JH291127 T 278 C 0 s papAnu2.chr2 187294214 9 + 187378091 GAGAGAGGG i papAnu2.chr2 I 2 C 0 e mm10.chr16 32759730 0 + 98207768 C e calJac3.chr17 73796390 86 + 74750902 T e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322889 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=59363.000000 s hg38.chr3_KI270937v1_alt 21313 64 + 165607 TTCCACCCCCTAAGTGATGGAGATGGGGTGTCTGCACCCCTGAGTGATGGAGAGAGGGTGTCTA s panTro4.chr3 2540347 64 - 202329955 TTCCACCTGCTAAGAGATGGAGATGGGGTGTCTGCACCCCTGATCGATGGAGAGAGGGTGTCTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58645 61 - 111706 TTCCACCC---GAGCGATGGAGAGAGGGTGTCTACACCCCCGAGCGATGGAGAGAGGGTGTCTA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294223 64 + 187378091 CTCCACCCCCTGAGTGATGGAGAGAGGGTGTCTACACCCCCGAGTGATGGAGAGAGGGTGTCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322889 61 + 91754291 ---CACCCCCTGAGTTATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGTGTCTA i chlSab2.chr15 C 0 T 212 s calJac3.chr17 73796304 59 + 74750902 CTCCACCCCCTGAGTGATGGGGAGAGAGC-TCCAC-CCCCTGAGTGATAGAGAGAG---ATCTC i calJac3.chr17 T 86 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=10260.000000 s hg38.chr3_KI270937v1_alt 21377 21 + 165607 CACCC-CTGAGCGATGGAGGGG s panTro4.chr3 2540411 14 - 202329955 CACCC-GTGAGCGAT------- i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58706 21 - 111706 CACCC-CCGAGCGATGGAGAGA i rheMac3.chrUn_JH291127 C 0 T 115 s papAnu2.chr2 187294287 21 + 187378091 CACCC-CTGAGTGATGGAGAGA i papAnu2.chr2 C 0 I 1 s calJac3.chr17 73796363 22 + 74750902 CACCCACTGAGCAATGGAGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322950 212 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=1476.000000 s hg38.chr3_KI270937v1_alt 21398 2 + 165607 GG s rheMac3.chrUn_JH291127 58612 2 - 111706 GG i rheMac3.chrUn_JH291127 T 115 C 0 s papAnu2.chr2 187294309 2 + 187378091 GG i papAnu2.chr2 I 1 T 206 s chlSab2.chr15 91322738 2 + 91754291 GG i chlSab2.chr15 T 212 C 0 s calJac3.chr17 73796385 2 + 74750902 GA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C e panTro4.chr3 2540425 0 - 202329955 C a score=9820.000000 s hg38.chr3_KI270937v1_alt 21400 22 + 165607 TGCCTACACCTGCTGAGCGATA s panTro4.chr3 2540425 1 - 202329955 ---------------------A i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58614 22 - 111706 TGTCTACACCTGCTGAGCCATG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294105 22 + 187378091 TGTCTACACCTGCTGAACCATG i papAnu2.chr2 T 206 C 0 s chlSab2.chr15 91322740 22 + 91754291 TGTCTACACCTGCTGAGCCATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796387 21 + 74750902 -CACTCCACCCCCTGAGTGATG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2783436 0 - 123690457 C a score=16291.000000 s hg38.chr3_KI270937v1_alt 21422 17 + 165607 GAGAGAGGT-TTCCACCC s panTro4.chr3 2540426 8 - 202329955 GAGAGAGG---------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2783436 17 - 123690457 GAGAGAGGT-TTCCACCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58636 17 - 111706 GAGAGAGAT-TTCCACCC i rheMac3.chrUn_JH291127 C 0 I 117 s papAnu2.chr2 187294127 17 + 187378091 GAGAGAGAT-TTCCACAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322762 17 + 91754291 GAAAGAGAT-TTCCACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796408 18 + 74750902 GAGAGAGACACTCCACCC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1902.000000 s hg38.chr3_KI270937v1_alt 21439 3 + 165607 CCT s nomLeu3.chr11 2783453 3 - 123690457 CCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58770 3 - 111706 CCT i rheMac3.chrUn_JH291127 I 117 C 0 s papAnu2.chr2 187294144 2 + 187378091 -CC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796426 3 + 74750902 CCT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322779 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2540434 0 - 202329955 C a score=74037.000000 s hg38.chr3_KI270937v1_alt 21442 90 + 165607 AAGTGATGGAGATGGGGTGTCTGCA-CCCCTGAGCGATGGAGAGAGGGTATCTACACCTGCTGAGTGATAGAGAGAGGTTTCCACCCCCTA s panTro4.chr3 2540434 74 - 202329955 ----------------GTGTCTACA-CCTCTGAGCGATGGAGAGAGGGTGTCTACACCTGCTGAGCGATAGAGAGAGGTTTCCACCCGCTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2783456 87 - 123690457 AAGTGATGGAGAGGGGGTGTCTACA-CCCCTGAACAACGGAGGGAGGG---CTCCGCTCCCTGAGTGATGGAAGGAGGGCTCCACCCCCTG i nomLeu3.chr11 C 0 I 9651 s rheMac3.chrUn_JH291127 58773 87 - 111706 GAGTGATG--GAGAGGGTGTCTAAA-ATCCTGAGTGTTGGAGCGAGGGTGTCTACACCC-CAGAGTGATGGAGAGAGGGCTCCACCCCCTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294146 89 + 187378091 GAGTGATGGAGAGAGGGTGTCTACA-CCCCCGAGCGATGGAGAGAGGGTGTCTACACCC-CTGAGTGATGGAGAGAGGGCTCCACCCCCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322779 43 + 91754291 -------------------------------GAGCGATGGAGAGAGGGTGTCTACACCC-CTGAGCGATGGAGAG---------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796429 85 + 74750902 GAGTGATGGAGAGAG---ATCTCCACCCCCTGAGTGATGGAGAGAGAG---CTCCACACCCTGAGTGATGGAGAGAGATCTCCACCCCCTG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=8411.000000 s hg38.chr3_KI270937v1_alt 21532 7 + 165607 AGTGATG s panTro4.chr3 2540508 7 - 202329955 AGTGATG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793194 7 - 123690457 AGCGATG i nomLeu3.chr11 I 9651 I 57 s rheMac3.chrUn_JH291127 58860 7 - 111706 AGTGATG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294235 7 + 187378091 AGTGATG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796514 7 + 74750902 AGAGATG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322822 0 + 91754291 C e macFas5.chr2 192362332 14732 - 192460366 M a score=19339.000000 s hg38.chr3_KI270937v1_alt 21539 22 + 165607 GAGATGGGGTGTCTGCACCCCT- s panTro4.chr3 2540515 22 - 202329955 GAGATGGGGTGTCTGCACCCCT- i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793258 22 - 123690457 GAGAGGGGGTGTCTACACCCCT- i nomLeu3.chr11 I 57 C 0 s rheMac3.chrUn_JH291127 58867 22 - 111706 TAAAAACGGAGTCTACACCCCT- i rheMac3.chrUn_JH291127 C 0 T 236 s papAnu2.chr2 187294242 22 + 187378091 GAGAGAGGGTGTCTACACCCCC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322822 15 + 91754291 -------GGTGTCTACACCCCC- i chlSab2.chr15 C 0 T 58 s calJac3.chr17 73796521 20 + 74750902 ---GAGAGAGATCTCCACCCCGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=58319.000000 s hg38.chr3_KI270937v1_alt 21561 40 + 165607 GAGCGATGGAGAGAGGGTGTCTACAC-CCCTGAGCGATGGA s panTro4.chr3 2540537 40 - 202329955 GAGCAATGGAGAGAGGGTGTCTACAC-CCCTGAGTGATGGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793280 38 - 123690457 GAACAATGGAGGGAGGG---CTCCACTCCCTGAGTGATGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58653 40 - 111706 GAGCGATGGAGAGAGGGTGTCTACAC-CCCCGAGCGATGGA i rheMac3.chrUn_JH291127 T 236 C 0 s papAnu2.chr2 187294264 40 + 187378091 GAGTGATGGAGAGAGGGTGTCTACAC-CCCTGAGTGATGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322779 40 + 91754291 GAGCGATGGAGAGAGGGTGTCTACAC-CCCTGAGCGATGGA i chlSab2.chr15 T 58 I 59 s calJac3.chr17 73796541 38 + 74750902 GAGTGATGGAGAGAGAG---CTCCACACCCTGAGAGATGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=24472.000000 s hg38.chr3_KI270937v1_alt 21601 24 + 165607 GAGGGGGTGTCTACACCCCT-GAGC s panTro4.chr3 2540577 24 - 202329955 GAGGGGGTGTCTACACCCCT-GAGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793318 22 - 123690457 GGGAGGGC-TCCAC-CCCCT-GAGC i nomLeu3.chr11 C 0 T 149 s rheMac3.chrUn_JH291127 58693 24 - 111706 GAGAGGGTGTCTACACCCCC-GAGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294304 24 + 187378091 GAGAGGGTGTCTACACCCCT-GAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322878 23 + 91754291 --GAGGGTGTCTACACCCCCTGAGT i chlSab2.chr15 I 59 C 0 s calJac3.chr17 73796579 22 + 74750902 -GAGAGATCTCCAC-CCCCT-GAGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=6530.000000 s hg38.chr3_KI270937v1_alt 21625 8 + 165607 GATGGAGA s panTro4.chr3 2540601 8 - 202329955 GATGGAGA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58717 8 - 111706 GATGGAGA i rheMac3.chrUn_JH291127 C 0 I 236 s papAnu2.chr2 187294328 8 + 187378091 GATGGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322901 5 + 91754291 TATGG--- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796601 8 + 74750902 GATGGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T a score=10756.000000 s hg38.chr3_KI270937v1_alt 21633 43 + 165607 GAGGATGTCTACACC-CCGAACGATA--GAGAGGGTGTCCACACCC- s rheMac3.chrUn_JH291127 58961 46 - 111706 GAGGTTGTCTACACCGCTGAGTGATGGAGAGAGGGTGTCTACACCG- i rheMac3.chrUn_JH291127 I 236 C 0 s papAnu2.chr2 187294336 44 + 187378091 GAGGGTGTCTACACCGCTGAGTGATG--GAGAGGGTGTCTACATCC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322906 19 + 91754291 ---------------------------AGAGAGGGTGTCTACACCC- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796609 43 + 74750902 GAGACACTCCACCCC-CTGAGTGATG--GAGAGAG-ATCTCCACCCC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793340 149 - 123690457 T e panTro4.chr3 2540609 0 - 202329955 C a score=11543.000000 s hg38.chr3_KI270937v1_alt 21676 14 + 165607 CTGAGCGATGAAGG s nomLeu3.chr11 2793191 12 - 123690457 CTCAGCGATGGA-- i nomLeu3.chr11 T 149 C 0 s rheMac3.chrUn_JH291127 59007 12 - 111706 CTGAGTGATGGA-- i rheMac3.chrUn_JH291127 C 0 T 294 s papAnu2.chr2 187294380 14 + 187378091 CTGAGTGATGGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322925 14 + 91754291 CTGAGTGATGGAGA i chlSab2.chr15 C 0 T 120 s calJac3.chr17 73796652 14 + 74750902 CTGAGTGATGGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2540609 0 - 202329955 C a score=20255.000000 s hg38.chr3_KI270937v1_alt 21690 16 + 165607 GAGGGTGTCTACACCC s panTro4.chr3 2540609 16 - 202329955 GAGGGTGTCTACACCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793203 16 - 123690457 GAGGGTGTCTACACCT i nomLeu3.chr11 C 0 I 1 s rheMac3.chrUn_JH291127 58725 16 - 111706 GAGGGTGTCTACACCC i rheMac3.chrUn_JH291127 T 294 C 0 s papAnu2.chr2 187294394 13 + 187378091 GAGGG---CTCCACCC i papAnu2.chr2 C 0 T 290 s chlSab2.chr15 91322819 16 + 91754291 GAGGGTGTCTACACCC i chlSab2.chr15 T 120 I 1 s calJac3.chr17 73796666 13 + 74750902 ---GAGATCTCCACCC i calJac3.chr17 C 0 I 1 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4011.000000 s hg38.chr3_KI270937v1_alt 21706 2 + 165607 CT s panTro4.chr3 2540625 2 - 202329955 CT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793220 2 - 123690457 CT i nomLeu3.chr11 I 1 C 0 s rheMac3.chrUn_JH291127 58741 2 - 111706 CT i rheMac3.chrUn_JH291127 C 0 T 90 s papAnu2.chr2 187294117 2 + 187378091 CT i papAnu2.chr2 T 290 C 0 s chlSab2.chr15 91322836 2 + 91754291 CT i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73796680 2 + 74750902 CT i calJac3.chr17 I 1 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=17537.000000 s hg38.chr3_KI270937v1_alt 21708 28 + 165607 GAGCGATGGAGAGA----------------------------GGGTGTCCACACCC s panTro4.chr3 2540627 56 - 202329955 GAACGATGGACAGAGGTTTCCACCCGCTAAGTGATGGAGATGGGGTGTCTGCACCC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793222 26 - 123690457 GAGCGATGGAGAGA-----------------------------GGTTTCCACCCC- i nomLeu3.chr11 C 0 T 57 s rheMac3.chrUn_JH291127 58653 28 - 111706 GAGCGATGGAGAGA----------------------------GGGTGTCTACACCC i rheMac3.chrUn_JH291127 T 90 C 0 s papAnu2.chr2 187294119 25 + 187378091 GAACCATGGAGAGA----------------------------G---ATTTCCACAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322838 28 + 91754291 GAGTTATGGAGAGA----------------------------GGGTGTCTACACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796682 27 + 74750902 GAGCGATGGAGAGA----------------------------GACACTCCACCCC- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=102690.000000 s hg38.chr3_KI270937v1_alt 21736 80 + 165607 CTGAGCGATGGAGAGAGGGTGTCTACACCC-CT-GAGCGATGGAGAGAGGGTATCTACACCCCTGAGCGATGGAGAGAGGGT s panTro4.chr3 2540683 80 - 202329955 CTGAGCGATGGAGATGGGGTGTCTGCACCC-CT-GAGCGATGGAGATGGGGTGTCTGCACCCCTGAGTGATGGAGAGAGGGT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793191 77 - 123690457 CTCAGCGATGGAGA--GGGTGTCTACACCTGCT-GAGCGATGGAGAGAGGTT-TCCAC-CCCCTAAGTGATGGAGAGGGGGT i nomLeu3.chr11 T 57 C 0 s rheMac3.chrUn_JH291127 58681 80 - 111706 CCGAGCGATGGAGAGAGGGTGTCTACACCC-CC-GAGCGATGGAGAGAGGGTGTCTACACCCCTGAGTGATGTAGAGATGAT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294144 80 + 187378091 CCGAGTGATGGAGAGAGGGTGTCTACACCC-CC-GAGCGATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322866 79 + 91754291 CTGAGTGATG--GAGAGGGTGTCTACACCC-CCTGAGTTATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796709 78 + 74750902 CTGAGTGATGGAGAGAGACACTCCAC-CCC-CT-GAGTGATGGAGAGAGACACTCCAC-CCCCTGAGTGATGGAGAGAGAGC i calJac3.chr17 C 0 I 56 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4637.000000 s hg38.chr3_KI270937v1_alt 21816 5 + 165607 -GTCTA s panTro4.chr3 2540763 5 - 202329955 -GTCTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793268 5 - 123690457 -GTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58761 5 - 111706 -GTCTA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294224 4 + 187378091 --TCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322945 5 + 91754291 -GTCTA i chlSab2.chr15 C 0 T 89 s calJac3.chr17 73796843 6 + 74750902 GCTCCA i calJac3.chr17 I 56 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=2616.000000 s hg38.chr3_KI270937v1_alt 21821 21 + 165607 CACCCCTGAGCGATGAAGGGA s panTro4.chr3 2540768 21 - 202329955 CACCCCTGAGCGATGAAGGGA i panTro4.chr3 C 0 I 129 s nomLeu3.chr11 2793273 21 - 123690457 CACCCCTGAACAATGGAGGGA i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73796849 1 + 74750902 ----------C---------- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322950 89 + 91754291 T e papAnu2.chr2 187294228 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58766 0 - 111706 C a score=269.000000 s hg38.chr3_KI270937v1_alt 21842 4 + 165607 GGGT s nomLeu3.chr11 2793294 4 - 123690457 GGGC i nomLeu3.chr11 C 0 T 107 e mm10.chr16 32759730 0 + 98207768 C e calJac3.chr17 73796850 0 + 74750902 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322950 89 + 91754291 T e papAnu2.chr2 187294228 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58766 0 - 111706 C e panTro4.chr3 2540789 129 - 202329955 I a score=0.000000 s hg38.chr3_KI270937v1_alt 21846 15 + 165607 GTCTATAGCCCTGAG e mm10.chr16 32759730 0 + 98207768 C e calJac3.chr17 73796850 0 + 74750902 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91322950 89 + 91754291 T e papAnu2.chr2 187294228 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 58766 0 - 111706 C e nomLeu3.chr11 2793298 107 - 123690457 T e panTro4.chr3 2540789 129 - 202329955 I a score=8594.000000 s hg38.chr3_KI270937v1_alt 21861 35 + 165607 CACCCCTGAGCGATGAAGGGAG-GGTGTCTATACCC- s panTro4.chr3 2540918 35 - 202329955 CACCCCTGAGCGATGGAGGGAG-GGTGTCTACACCC- i panTro4.chr3 I 129 C 0 s rheMac3.chrUn_JH291127 58766 33 - 111706 CGCACCTGAGTGATGGA--GAG-GGTGTCTAAAATC- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294228 6 + 187378091 CCCCCT------------------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322861 33 + 91754291 CACCCCTGAGTGATGGA--GAG-GGTGTCTACACCC- i chlSab2.chr15 T 89 C 0 s calJac3.chr17 73796850 33 + 74750902 --CCCCTGAGAGATGGA--GAGAGACATCTCTACCCC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 107 - 123690457 T a score=2255.000000 s hg38.chr3_KI270937v1_alt 21896 2 + 165607 CT s panTro4.chr3 2540953 2 - 202329955 CT i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793191 2 - 123690457 CT i nomLeu3.chr11 T 107 C 0 s rheMac3.chrUn_JH291127 58799 2 - 111706 CT i rheMac3.chrUn_JH291127 C 0 T 148 s chlSab2.chr15 91322894 2 + 91754291 CC i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73796883 2 + 74750902 CT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294234 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M a score=61736.000000 s hg38.chr3_KI270937v1_alt 21898 48 + 165607 GAGCGATGGAGAGAGGGTGTCTACACCC-CTGAGCGATGGAGAGGGGGT----- s panTro4.chr3 2540955 49 - 202329955 GAACGATGGGGAGAGGGTGTCTACACCTGCTGAGCGATAGAGAGAGGTT----- i panTro4.chr3 C 0 T 215 s nomLeu3.chr11 2793193 47 - 123690457 CAGCGATG--GAGAGGGTGTCTACACCTGCTGAGCGATGGAGAGAGGTT----- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58653 48 - 111706 GAGCGATGGAGAGAGGGTGTCTACACCC-CCGAGCGATGGAGAGAGGGT----- i rheMac3.chrUn_JH291127 T 148 C 0 s papAnu2.chr2 187294234 48 + 187378091 GAGTGATGGAGAGAGGGTGTCTACACCC-CCGAGTGATGGAGAGAGGGT----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322897 48 + 91754291 GAGTTATGGAGAGAGGGTGTCTACACCC-CTGAGTGATGGAGAGAGGGT----- i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73796885 51 + 74750902 GAGAGATGGAGAGAG---ATCTCCACCCCCTGAGTGATGGAGAGAGAGAAGAAT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=23879.000000 s hg38.chr3_KI270937v1_alt 21946 26 + 165607 GTCTACACCCCTGAGCGATGGAGAGG s nomLeu3.chr11 2793240 24 - 123690457 -TCCAC-CCCCTAAGTGATGGAGAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58701 26 - 111706 GTCTACACCCCCGAGCGATGGAGAGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294282 26 + 187378091 GTCTACACCCCTGAGTGATGGAGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322945 26 + 91754291 GTCTACACCCCTGAGTGATGGAGAGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796936 24 + 74750902 CTCCAC-CCCCCGAGAGATGGAGAG- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3 2541004 215 - 202329955 T a score=47867.000000 s hg38.chr3_KI270937v1_alt 21972 34 + 165607 GGGTGTCTACACCCCTGAGCGATGGAGAGAGGAT s panTro4.chr3 2540789 34 - 202329955 GGGTGTCTACACCCCTGAGCGATGGAGAGAGGGT i panTro4.chr3 T 215 C 0 s nomLeu3.chr11 2793264 34 - 123690457 GGGTGTCTACACCCCTGAACAATGGAGGGAGGGC i nomLeu3.chr11 C 0 T 97 s rheMac3.chrUn_JH291127 58727 34 - 111706 GGGTGTCTACACCCCTGAGTGATGTAGAGATGAT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294308 34 + 187378091 GGGTGTCTACACCCCTGAGTGATGGAGAGAGGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322971 34 + 91754291 GGGTGTCTACACCCCTGAGTGATGGAGAGAGGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796960 32 + 74750902 AGATCTCCAC-CCCCTGAACAATGGAGAGAAGT- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=5360.000000 s hg38.chr3_KI270937v1_alt 22006 5 + 165607 GTCTA s panTro4.chr3 2540823 5 - 202329955 GTCTA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58761 5 - 111706 GTCTA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294342 5 + 187378091 GTCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91323005 5 + 91754291 GTCTA i chlSab2.chr15 C 0 T 60 s calJac3.chr17 73796992 5 + 74750902 CTCCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=7361.000000 s hg38.chr3_KI270937v1_alt 22011 8 + 165607 CACCCCTG s panTro4.chr3 2540828 8 - 202329955 CACCCCTG i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58766 8 - 111706 CGCACCTG i rheMac3.chrUn_JH291127 C 0 I 176 s papAnu2.chr2 187294347 8 + 187378091 CACCGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322950 8 + 91754291 CACCCCTG i chlSab2.chr15 T 60 C 0 s calJac3.chr17 73796997 7 + 74750902 -CCCCCTG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=36170.000000 s hg38.chr3_KI270937v1_alt 22019 39 + 165607 AGCGATGAAGGGAG-GGTGTCTACACCCCTGAGGGATGGA s panTro4.chr3 2540836 39 - 202329955 AGCGATGGAGAGAG-GGTGTCTACACCCCTGAGCGATGGA i panTro4.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 58950 39 - 111706 AGCGATGGAGAGAG-GTTGTCTACACCGCTGAGTGATGGA i rheMac3.chrUn_JH291127 I 176 C 0 s papAnu2.chr2 187294355 37 + 187378091 AGTGATGGAGAGGG---TGTCTACATCCCTGAGTGATGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322958 39 + 91754291 AGTGATGGAGAGAG-GGTGTCTACACCCCTGAGTGATGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797004 39 + 74750902 AGCCATGGAAAGAGAGATCTCCAC-CCCCTGAGCCATGGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793298 97 - 123690457 T a score=12018.000000 s hg38.chr3_KI270937v1_alt 22058 7 + 165607 GAGAGGG s panTro4.chr3 2540875 7 - 202329955 GGGAAGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793201 7 - 123690457 GAGAGGG i nomLeu3.chr11 T 97 C 0 s rheMac3.chrUn_JH291127 58989 7 - 111706 GAGAGGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294392 7 + 187378091 GAGAGGG i papAnu2.chr2 C 0 T 294 s chlSab2.chr15 91322997 7 + 91754291 GAGAGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797043 7 + 74750902 GAGAGAG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=2499.000000 s hg38.chr3_KI270937v1_alt 22065 2 + 165607 TG s panTro4.chr3 2540882 2 - 202329955 TG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793208 2 - 123690457 TG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58996 2 - 111706 TG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294105 2 + 187378091 TG i papAnu2.chr2 T 294 C 0 s chlSab2.chr15 91323004 2 + 91754291 TG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797050 1 + 74750902 -A i calJac3.chr17 C 0 T 264 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4011.000000 s hg38.chr3_KI270937v1_alt 22067 2 + 165607 TC s panTro4.chr3 2540884 2 - 202329955 TC i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2793210 2 - 123690457 TC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58998 2 - 111706 TC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294107 2 + 187378091 TC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91323006 2 + 91754291 TC i chlSab2.chr15 C 0 T 58 s calJac3.chr17 73796787 2 + 74750902 TC i calJac3.chr17 T 264 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4875.000000 s hg38.chr3_KI270937v1_alt 22069 7 + 165607 CACACCT s panTro4.chr3 2540886 7 - 202329955 TACACCC i panTro4.chr3 C 0 N 0 s nomLeu3.chr11 2793212 7 - 123690457 TACACCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59000 6 - 111706 TACACC- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294109 7 + 187378091 TACACCT i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796789 7 + 74750902 CACCCCT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M a score=10659.000000 s hg38.chr3_KI270937v1_alt 22076 15 + 165607 GCTGAGTGATAGAGA s nomLeu3.chr11 2793219 15 - 123690457 GCTGAGCGATGGAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59006 15 - 111706 GCTGAGTGATGGAGA i rheMac3.chrUn_JH291127 C 0 T 247 s papAnu2.chr2 187294116 15 + 187378091 GCTGAACCATGGAGA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796796 13 + 74750902 --TGAGTGATGGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M a score=2359.000000 s hg38.chr3_KI270937v1_alt 22091 5 + 165607 GAGGT s nomLeu3.chr11 2793234 5 - 123690457 GAGGT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187294131 5 + 187378091 GAGAT i papAnu2.chr2 C 0 I 263 s calJac3.chr17 73796809 5 + 74750902 GAGAT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59021 247 - 111706 T a score=5972.000000 s hg38.chr3_KI270937v1_alt 22096 12 + 165607 TTCCACCCCCTA s nomLeu3.chr11 2793239 12 - 123690457 TTCCACCCCCTA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187294399 12 + 187378091 CTCCACCCCCTG i papAnu2.chr2 I 263 C 0 s calJac3.chr17 73796814 12 + 74750902 CTCCACCCCCTG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59021 247 - 111706 T a score=9867.000000 s hg38.chr3_KI270937v1_alt 22108 22 + 165607 AGTGATGGAGATGGGGTGTCTG s nomLeu3.chr11 2793251 22 - 123690457 AGTGATGGAGAGGGGGTGTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 58774 20 - 111706 AGTGATGGAG--AGGGTGTCTA i rheMac3.chrUn_JH291127 T 247 C 0 s papAnu2.chr2 187294411 22 + 187378091 AGTGATGGAGATAGGCTGTTTA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73796826 21 + 74750902 AGTGATGGAGAGAGACAGCTC- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91323008 58 + 91754291 T e macFas5.chr2 192362332 14732 - 192460366 M a score=6884.000000 s hg38.chr3_KI270937v1_alt 22130 13 + 165607 -CACCCCTGAGCGA s nomLeu3.chr11 2793273 13 - 123690457 -CACCCCTGAACAA i nomLeu3.chr11 C 0 T 9860 s rheMac3.chrUn_JH291127 58794 13 - 111706 -AAATCCTGAGTGT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294433 13 + 187378091 -CACTTGTGACTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91322950 13 + 91754291 -CACCCCTGAGTGA i chlSab2.chr15 T 58 C 0 s calJac3.chr17 73796847 14 + 74750902 CACCCCCTGAGAGA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=24782.000000 s hg38.chr3_KI270937v1_alt 22143 44 + 165607 TGGAGAGAGG-GTGTCTACACCCCTGAGCGGTGGAGAG-AGGGTGT s rheMac3.chrUn_JH291127 58807 44 - 111706 TGGAGCGAGG-GTGTCTACACCCCAGAGTGATGGAGAG-AGGGCTC i rheMac3.chrUn_JH291127 C 0 I 28 s papAnu2.chr2 187294446 45 + 187378091 TGGAGAGAGA-GTGTCTACACTCCTGAGTGATGGAGAGCAGGGTTT i papAnu2.chr2 C 0 T 295 s chlSab2.chr15 91322963 44 + 91754291 TGGAGAGAGG-GTGTCTACACCCCTGAGTGATGGAGAG-AGGGTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73796861 43 + 74750902 TGGAGAGAGACATCTCTAC-CCCCTGAGAGATGGAGAG-AGATCT- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=2332.000000 s hg38.chr3_KI270937v1_alt 22187 3 + 165607 CTA s rheMac3.chrUn_JH291127 58879 3 - 111706 CTA i rheMac3.chrUn_JH291127 I 28 C 0 s papAnu2.chr2 187294196 3 + 187378091 CTA i papAnu2.chr2 T 295 C 0 s chlSab2.chr15 91323007 3 + 91754291 CTA i chlSab2.chr15 C 0 T 6951 s calJac3.chr17 73796904 3 + 74750902 CCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=103411.000000 s hg38.chr3_KI270937v1_alt 22190 198 + 165607 CACCCCTGAGCGATGAAGGGAGGGTGTCTACACCCCTGAGCGATGAAGGGAGGGTGTCTACACCCCTGAGCGATGGAGAGAGGGTGTCTACACCCCTGAGCGATGGAGGGAGGGTGTCTACACCCCTGAGCGATGAAGGGAGGGTGTCTACA-CCCCTGAGCGATGAAGGGAGGGTGTCTACACCC-CTGAGCGATGGAG s rheMac3.chrUn_JH291127 58882 197 - 111706 CACCCCTGAGTGATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGTGTCTACACCCCCGAGCGATGGAGAGAGGTTGTCTACACCGCTGAGTGATGGAGAGAGGGTGTCTACACCGCTGAGTGATG--GAGAGGGTGTCTATACCCCCTGAGTTATGGAGAGAGGGTGTCTACACCC-CTTAGTGATGGAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294199 194 + 187378091 CACCCCTGAGTGATGGAGAGAGGGC-TCCAC-CCCCTGAGTGATGGAGAGAGGGTGTCTACACCCCCGAGTGATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGTGTCTACACCCCTGAGTGATGGAGAGAGGGTGTCTACA-CCGCTGAGTGATG--GAGAGGGTGTCTACATCC-CTGAGTGATGGAG i papAnu2.chr2 C 0 T 58 s chlSab2.chr15 91316059 192 + 91754291 TAGCCCTGAGTGATGGAGAGAGGGTGTCTACACCGCTGAGTGATG--GAGAGGGTGTCTATAGCCCTGAGTGATGGAGAGAGGGTGTCTACACCGCTGAGTGATG--GAGAGGGTGTCTATAGCCCTGAGTGATGGAGAGAGGGTGTCTACA-CCGCTGAGTGATG--GAGAGGGTGTGTACATCC-CTGAGTGATGGAG i chlSab2.chr15 T 6951 C 0 s calJac3.chr17 73796907 167 + 74750902 -CCCCCTGAGTGATGGAGAGAGAGA-------------------------AGAATCTCCAC-CCCCCGAGAGATGGAGAGAGA-TCTCCAC-CCCCTGAACAATGGAGAGA-AGTCTCCAC-CCCCTGAGCCATGGAAAGAGAG-ATCTCCACCCCCTGAGCCATGGAGAGAGAG-ATCTCCACCCTCTGAGTGATGGAG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=4137.000000 s hg38.chr3_KI270937v1_alt 22388 18 + 165607 AGAG-GGTGTCTACACCT-G s rheMac3.chrUn_JH291127 59079 17 - 111706 AGAG-GGTGTCTACACCG-- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294335 17 + 187378091 AGAG-GGTGTCTACACCG-- i papAnu2.chr2 T 58 C 0 s chlSab2.chr15 91316251 18 + 91754291 ATAG-GCTGTCTACACTTG- i chlSab2.chr15 C 0 I 26 s calJac3.chr17 73797074 17 + 74750902 AGAGAGGTCTCCACCCC--- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e nomLeu3.chr11 2793286 9860 - 123690457 T a score=5786.000000 s hg38.chr3_KI270937v1_alt 22406 11 + 165607 CTGAGCAATAG-- s nomLeu3.chr11 2783426 11 - 123690457 CTCAGCGATGG-- i nomLeu3.chr11 T 9860 C 0 s rheMac3.chrUn_JH291127 59096 11 - 111706 CTGAGTGATGG-- i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294352 11 + 187378091 CTGAGTGATGG-- i papAnu2.chr2 C 0 I 30 s calJac3.chr17 73797091 13 + 74750902 CTGAGCAATGGAA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91316269 26 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=137.000000 s hg38.chr3_KI270937v1_alt 22417 2 + 165607 AT s nomLeu3.chr11 2783437 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59107 2 - 111706 AG i rheMac3.chrUn_JH291127 C 0 C 0 s calJac3.chr17 73797104 2 + 74750902 AC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91316269 26 + 91754291 I e papAnu2.chr2 187294363 30 + 187378091 I e macFas5.chr2 192362332 14732 - 192460366 M a score=7228.000000 s hg38.chr3_KI270937v1_alt 22419 12 + 165607 AGAGGGTTCCAC s nomLeu3.chr11 2783439 12 - 123690457 AGAGGTTTCCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59109 12 - 111706 ACAGGGCTCCAG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294393 12 + 187378091 AGAGGGCTCCAC i papAnu2.chr2 I 30 C 0 s calJac3.chr17 73797106 12 + 74750902 AGAGATCTCCAC i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e chlSab2.chr15 91316269 26 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=23448.000000 s hg38.chr3_KI270937v1_alt 22431 39 + 165607 CCCCTAAGTGATGGAGATGGGGTGTCTGCACCCCTGAGC s nomLeu3.chr11 2783451 39 - 123690457 CCCCTAAGTGATGGAGAGGGGGTGTCTACACCCCTGAAC i nomLeu3.chr11 C 0 T 30 s rheMac3.chrUn_JH291127 59121 39 - 111706 CCACTGAGGGATGGAGATAGGCTGTCTACACTTGTGACT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294405 39 + 187378091 CCCCTGAGTGATGGAGATAGGCTGTTTACACTTGTGACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91316295 37 + 91754291 CTCCTGATTGATGGAG--AGGGTGTCTACACTCCTGAGT i chlSab2.chr15 I 26 C 0 s calJac3.chr17 73797118 17 + 74750902 CCCCTGAGTGATGGAGA---------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=31266.000000 s hg38.chr3_KI270937v1_alt 22470 37 + 165607 GATGGAGAGAGGGTGTCTACACCCCTGAGCGACGGAG s nomLeu3.chr11 2783460 37 - 123690457 GATGGAGAGGGGGTGTCTACACCCCTGAACAACGGAG i nomLeu3.chr11 T 30 C 0 s rheMac3.chrUn_JH291127 59160 37 - 111706 GATGGAGAGAGGGTGTCTACACTCCTGAGTGATGGAG i rheMac3.chrUn_JH291127 C 0 I 8 s papAnu2.chr2 187294444 37 + 187378091 GATGGAGAGAGAGTGTCTACACTCCTGAGTGATGGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91316332 35 + 91754291 GATG--GAGAGGGTGTCTATACTCCTGAGTGATGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797135 29 + 74750902 -------GAAGGATTTCCAC-CCCATGAGTGATGGTG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4788.000000 s hg38.chr3_KI270937v1_alt 22507 21 + 165607 GG-AGGGC-TCCAC-CCACTGAGC s nomLeu3.chr11 2783497 21 - 123690457 GG-AGGGC-TCCGC-TCCCTGAGT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187294481 23 + 187378091 AGCAGGGTTTCCAC-CTCCTGAGC i papAnu2.chr2 C 0 T 13 s chlSab2.chr15 91316367 21 + 91754291 ---AGGGTGTCTACACTCCTGAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797164 21 + 74750902 AG-AGATC-TTCAC-CCCATGACT i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59197 8 - 111706 I a score=1146.000000 s hg38.chr3_KI270937v1_alt 22528 2 + 165607 GA s nomLeu3.chr11 2783518 2 - 123690457 GA i nomLeu3.chr11 C 0 I 9766 s chlSab2.chr15 91316388 2 + 91754291 GA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797185 2 + 74750902 GA i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294504 13 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59197 8 - 111706 I a score=9188.000000 s hg38.chr3_KI270937v1_alt 22530 31 + 165607 TGGAGGGAGGGCTCCACCCCCTGAGCGATGG s nomLeu3.chr11 2793286 31 - 123690457 TGGAGGGAGGGCTCCACTCCCTGAGTGATGG i nomLeu3.chr11 I 9766 C 0 s chlSab2.chr15 91316390 31 + 91754291 TGGAGAGGGTGTCTACACTCCTGAGTGATGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797187 30 + 74750902 TGGAGAGAG-GTTTCTACCCCTGAGAAATGG i calJac3.chr17 C 0 C 0 e mm10.chr16 32759730 0 + 98207768 C e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294504 13 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59197 8 - 111706 I a score=595.000000 s hg38.chr3_KI270937v1_alt 22561 3 + 165607 AGA s nomLeu3.chr11 2793317 3 - 123690457 AGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91316421 3 + 91754291 AGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797217 3 + 74750902 GGA i calJac3.chr17 C 0 C 0 s mm10.chr16 32759730 3 + 98207768 AAT i mm10.chr16 C 0 C 0 e canFam3.chr33 2294038 3 - 31377067 I e papAnu2.chr2 187294504 13 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59197 8 - 111706 I a score=1731.000000 s hg38.chr3_KI270937v1_alt 22564 5 + 165607 GAGGG- s nomLeu3.chr11 2793320 5 - 123690457 GAGGG- i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91316424 5 + 91754291 GCAGG- i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73797220 5 + 74750902 GGGGG- i calJac3.chr17 C 0 I 1 s mm10.chr16 32759733 5 + 98207768 GAGGA- i mm10.chr16 C 0 I 2 s canFam3.chr33 2294041 5 - 31377067 -AGGGG i canFam3.chr33 I 3 C 0 e papAnu2.chr2 187294504 13 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59197 8 - 111706 I a score=-3932.000000 s hg38.chr3_KI270937v1_alt 22569 2 + 165607 --TT s nomLeu3.chr11 2793325 2 - 123690457 --CT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59205 2 - 111706 --TT i rheMac3.chrUn_JH291127 I 8 C 0 s chlSab2.chr15 91316430 2 + 91754291 --TT i chlSab2.chr15 I 1 I 1 s calJac3.chr17 73797226 2 + 74750902 --CT i calJac3.chr17 I 1 C 0 s mm10.chr16 32759740 1 + 98207768 --T- i mm10.chr16 I 2 C 0 s canFam3.chr33 2294046 2 - 31377067 AG-- i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187294504 13 + 187378091 T e macFas5.chr2 192362332 14732 - 192460366 M a score=1036012.000000 s hg38.chr3_KI270937v1_alt 22571 681 + 165607 CCACTCCCTGAGCCCCACCTAATGTGTCGCAAACTTCAGGATGGGGCCCAGGGGAC---TGGCCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTGCAGTGAAACAGGACCAAGCCTACCACCCGAGGACGCA----------AGGGATGGCCTG--AGGGCGGAGCAT-TCTGTGAGAATA-TATGGAAAGGGCTCTCCCCAAA----ACAGGACACAGGAGGTGACTT-CCAGGGGTTGTTAGCATCTCTAAAGCTCTA----------CCCTTGGGGGTCACGCTTTTGAGGAGCTGGACCAAGGCTGGGAC-TTTCCTCCCCA-------------CTTCCCTCCCTGAATGCTGACCACAAAACCCATGTGCTCAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTCCCAACAGGCTTCACAGGCCGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGTCAGGATCCCCCAGCAGCTGGCAGGGGAGACAAAGAGCTGTGTGGAAGGCTTTGCCAGAGTTGCTGC-----------TGTGACAGC-------CCCTGCAGCAGGGGACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCAGTCAAGGGACATTAAGCTGACT s nomLeu3.chr11 2793327 668 - 123690457 CCACCCCCTGAGCCCCACCTAATGTGTCACAAACTTCAGGATGGGGCCCAGGGCAC---TGGCCAAGAGGGGTGTG-CCTGTGA-GGGGCTGGTCCACAGCCAGGGATCTGCAGTGAAACAGGACCAAGCCTACCACCCGA---CGCA----------AGGGATGGCCTG--AGGGGGGAGCAC-TCTGTGAGATTA-TATGGAAAGGGCTCTCCCCAAG----CCAGGACACAGGAGGTGACTT-CCAGGGGTT---AGCATCTCTAAAGCTCTA----------CCCT-------CACGCTTCTGAGGAGCTGGACCAAGGCTGGGAC-TTTCCTCCCCA-------------CTTCCCTCCCTGAATGCTGACCACAAAACCCGTGTGCTCATTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCCAACCCACTGCGAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCGGGGGACCACATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGTCAGGATCCCCCAGTAGCTGGCAGGGGAGACAAAGAGTTGTGTGGAAGGCATTGCCAGAGTTGCTGC-----------TGTGACAGC-------CCCTGCAGCAGGGGACTGAGGCTTAAATATGGGTGT-GGGAGGAACCAGGCAAGGGACATTAAGCTGACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59207 681 - 111706 CCATCTCCTGAGCCCCACATGATGTGTCACAAGCTTCAGGATGGGGCCCAGGGGAC---TGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTGCAGTGAAACAGGACCAAGCCGACCACCCAAGGACCCA----------AGGGATGCCTTA--AGGGTGGAGTAT-TCTGTGAGATTA-TACGGAAAGGGCTCTCCCAAAG----CCAGGACACAGGAGGTGACTT-CCCGGGGTTGTTAGCACCTCTAAAGCTCTA----------CCCTTGGGGGTCACGCTTCTGTGGAGCTGGACCAAGGCTGGGAC-TTTCCTCCCCA-------------CCTTCCTCCCTGAATGGTAACCACAAAACCTGTGTGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCGGTCAGGATCCCGCAGCAGCTGGCAGAGGAGAAAAAGAGCTGTGTGGAAGGCATTGCCAGAGTCGCTGC-----------TGTGACAGC-------CCCTGCAGCAGGGGACTGAGGCTTAAATATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAGCTGACT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187294491 672 + 187378091 CCACCTCCTGAGCCCCACATGATGCGTCACAAGCTTCAGGAtggggcccaggggac---tggccAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTGCAGTGAAACAGGACCAAGCCGACCACCCAAGGACCCA----------AGGGATGCCTTA--AGGGTGGAGTAT-TCTGTGAGATTA-TATGGAAAGGGCTCTCCTGAAG----CCAGGACACAGGAGGTGACTT-CCCGGGGTTGTTAGCACCTCTAAAGCTCTA----------CCCTTGGGGGTCACGCTTCTGTGGAGCTGGACCAAGGCTGGGAC-TTtcctcccca-------------ccttcctccctgAATGGTAACCACAAAACCTGTGTGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCAGAGTCAGACTCCCAGATTTTCTCCTATCCCAACCCACTCCCAACAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCATTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGTCAGGAT-CCGCAGCAG--------GGAGAAACAGAGCTGTGTGGAAGGCATTGCCAGAGTCGCTGC-----------TGTGACAGC-------GTCTGCAGCAGGGGACTGAGGCTTAAGTATGGGTGT-GGGAGGAAGCTGGCAAGGGATATTAAGCTGACT i papAnu2.chr2 T 13 C 0 s chlSab2.chr15 91316433 674 + 91754291 CCACCTCCTGAGCCCCACATGATGTGTCACAAGCTTCAGGATGGGGCCCAGGGGAC---TGGCCAAGAGGGATGTG-TCTGTGA-TTGGCTGGTCCACAGCCGGGGATCTGCAGTGAAACAGGACCAAGCCGACCACCCAAGGACCCA----------AGGGATGCCTTA--AGGGTGGAGTAT-TCTGTGAGATTA-TATGGAAAGGGCTCTCCCGAAG----CCAGGACACAGGAGGTGACTT-CCCGGGGTTGTTAGCACCTCTAAAGCTCTA----------CCCTTGGGGATCACGCTTCTGTGGAGCTGGACCAAGGCTGGGAC-TTTCCTCCCCA-------------CCTTCCTCCTTGAATGGTAACCACAAAACCTGTATGCTTAGTTCACAGACAATGGCCAGATCATCTTCCCACAGTCAGACTACCAGATTTTCTCCTATCCCAACCCACTCCCAAGAGGCTTCACAGGCTGGGACCCTGTGGCCCTGGTGGCTCCGTTCTGGGACGATGCTGACTTCTCCACTGGTCAGGGGACCATATTTTATCAGGTGAGCCTTTCAAAGCC-TGGCAGTCAGGATCCCGCAGCAG-------GGGAGAAAAAGAGCTGTGTGGAAGGCATTGCCAGAGTCGCTGC-----------TGTGACAGC-------CCCTGCAGCAGGGGACTGAGGCTTAAATATGGGTAT-GGGAGGAAGCTGTCAAGGGATATTAAGCTGACT i chlSab2.chr15 I 1 I 4 s calJac3.chr17 73797228 651 + 74750902 CTACCCCCTGAGCCTCATCTGATGTGTCACAAGCTTCAGGATGGGGCCCAGAGGAC---TGGCCAAGAGAGGTGTG-CCTGTGAGGGGGCTGGTCCACAGCCAGGGGTCTGTACTGAAGCAGGACCAAGCCTACCACCTGAGGACCCA----------AGGGATGGCC---------------------------CA-TACGGAAAGGTCTCTCCTGAAA----TCAGGACATAGGAGATGACTT-CCAGGGGTTGTTAG--TCTCTAAAGCTCCACCCAGAGAGGCCCCTGGGGGTCG-GCTTCTGAGGAGCTGGGCCAAGGCTGGGGCGTTTCCTCCCCA-------------CCTCCCTCCCTGAATGCTCA-CACAAAACCCTTGTGCTCAGTTCACAGACAACGGCCAGATCATCTTCCCAGAGTCAGACTACCAGATTTTCTCCTACCCAAACCCGCTCCCAACAGGCTTCACAGGCTGGGAGACTGTGGCCCTGGTGGCTCCGTTCTGGGATGATGCTGATTTCTCCGACGGTCGAGGGACCGTATTTTACCGGGTGAGCCTCTCAAAGCC-TGGCAGTCAGGATCCCCCAGCAGCTGGCAGGGGAGGCAAAGAGCTGTGTGGAAGGCTTTGTCAGAGTTACTGC-----------TGCCACAGC---------------CAG------GAGGCTTAAATATGGCTGT-GGAAGGAAGCAGGCAAGGGATATCAAGCTGACT i calJac3.chr17 C 0 C 0 s mm10.chr16 32759741 677 + 98207768 TGACCCCTTTACCCTCATCTGATATGTCACAAGCTTCAAGAAAGGGT----GAAACACTTTACCAAGAAGGCTTTG--CTCTGA---GGCAAGCCTGGATGCAGG--------------CCGAACACCGCCCACTATTTT-GGACTGATGT-------GGGAATGTCCTGATAGGGATGAGTAT-T-TGTGAGGTTGCTAAGTTTTGAGTTCTCCTGGAAGGCTAAAAAGTGCACAAGGGGGCCG-TCAAGG----TTGATACCTCAAACCCTCTGCACAGATGGGCTTTTAAGGGGAGCTCTTCCGAGGAACTGGTCCTAGACTAGGAT-AACCCTTCCCT-------------CATCCCTCCCTAA--------CCAAGAACCCTTGTGCTCAGGTTACAGATAATGGTCAGATCATTTTCCCAGAGTCAGACTATGACGTCTTCTCCTACCCCAACCCACCTCAAAGAGGCTTCACCGGAAGGGAGCGCGTGGCCATGGTGGCCCCGTTCTGGGCTGATGCTGATTTCTCTAGCTCCAGGGGAGCCATATTTTACCAGGTGAGTCATTCAAGTCCTTGGCAGTCAGTAACTCCCAGCATCCTGCCTGGAGGGATCAAGGTCATGTCAAGAGCA-CATCAAGGTCATTGTATCCCATGGAATGTGA---T-------TTTCATGGAAAGGGACTGAAGTTTAAATACAGGGTG-CAGAGGGAGCTGAGGAAGAATGCTAAATAGACT i mm10.chr16 C 0 C 0 s canFam3.chr33 2294048 720 - 31377067 CAATCCTCTTAGCCCCATCTGATGCTGCTGGGACTTCAGGAAGGCTCCGTGGGGAT---CCACCCAGAGGGCTCCGCCCCGCGC-TGGGGCCGGCTATGGATGGGGTTGGCCGCCGAGGCAGGGCAAAACCTACCTTGTCAGGAAGGACTTAAAACAGAGGAGTGTCCTG--CAGGTGAAGAGCATCTGTGTGAGGA-CTAAGCAAGGTGGCCCAGCAGG----CGGGGACGAATGGGACGACCTGGCAGTGGTTGTTGACATCCCTAAAGTTCCACCCAGAGAGGTCCTTGGGGATCACACTTCTGAGGAACCGGCCCACGCCTGGGAC-GTtctctccctgcctcccccgctccctccctccctGGACACTAACCAGAACTTCTGTGTTCCCAGTTCACAGATAATGGCCAGATCATTTTCCCGGAGTCAGAGTACCAGATTTTCTCCTACCCCAATCCTCCCCTTAGAGGCTTCACAGGCAGGGACCCTGTGGCCATGGTGGCTCCATTCTGGGACGATGCTGATTTTTCCAGTGGCCAGGGGACCATATTTTACCAGGTGAGCCTTTCAAAGTC-CAGCATTCAGGATCTCCCAGCAGCCAGCA-AGGAGAGACAAAGGTGTGAACGTGG----GCAAGCGTGACTGC-----------TGTCAGAGCCTGGGCTCCCTGTGGGCAGAGAGTGATGTTTAAATATGAGGGTGGGGAGGAAACAGAGCAGGGCTGTTACATACACT i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=36394.000000 s hg38.chr3_KI270937v1_alt 23252 19 + 165607 CAGGAGTACCCCAACCCAA s nomLeu3.chr11 2793995 19 - 123690457 CAGGAATATCCCAACCCAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59888 19 - 111706 CAGGAATACCCCAACCCAA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295163 19 + 187378091 CAGGAATACCCCAACCCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91317111 19 + 91754291 CAGGAATACCCCAACCCAA i chlSab2.chr15 I 4 C 0 s calJac3.chr17 73797879 19 + 74750902 CAGGAATACCCCAACCCAA i calJac3.chr17 C 0 C 0 s mm10.chr16 32760418 19 + 98207768 CTGGAACACCCTACTCCAA i mm10.chr16 C 0 C 0 s canFam3.chr33 2294768 19 - 31377067 CGGGAATCCCCCCTCACAG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=2536.000000 s hg38.chr3_KI270937v1_alt 23271 10 + 165607 CCACGAGACT s nomLeu3.chr11 2794014 10 - 123690457 CCACGAAACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317130 10 + 91754291 CCATGAGACT i chlSab2.chr15 C 0 T 32 s canFam3.chr33 2294787 9 - 31377067 CCATGAGGT- i canFam3.chr33 C 0 C 0 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=2346.000000 s hg38.chr3_KI270937v1_alt 23281 4 + 165607 GACC s nomLeu3.chr11 2794024 4 - 123690457 GACC i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 4 + 91754291 GACC i chlSab2.chr15 T 32 C 0 s canFam3.chr33 2294796 4 - 31377067 GACC i canFam3.chr33 C 0 I 5 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=7543.000000 s hg38.chr3_KI270937v1_alt 23285 28 + 165607 AGGAATACCCCAACCCAACCACGAGACT s nomLeu3.chr11 2794028 28 - 123690457 AGGAATACCCCAACCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317112 28 + 91754291 AGGAATACCCCAACCCAACCATGAGACT i chlSab2.chr15 C 0 T 32 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=7993.000000 s hg38.chr3_KI270937v1_alt 23313 32 + 165607 GACCAGGAATACCCCAACCCGGCCGCGAGACT s nomLeu3.chr11 2794056 32 - 123690457 GACCAGGAATACCCCAGCCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 32 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACT i chlSab2.chr15 T 32 T 32 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=33315.000000 s hg38.chr3_KI270937v1_alt 23345 126 + 165607 GACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGA s nomLeu3.chr11 2794088 126 - 123690457 GGCCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAACCCAGCCACGAGACTGACCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAGCCCAGCCACGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 126 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGA i chlSab2.chr15 T 32 T 32 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=8472.000000 s hg38.chr3_KI270937v1_alt 23471 32 + 165607 CTGACCAGGAATACCCCAACCCAACCACGAGA s nomLeu3.chr11 2794214 32 - 123690457 CTGACCAGGAATACCCCAGCCCAGCCACGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317202 32 + 91754291 CTGACCAGGAATACCCCAACCCAACCATGAGA i chlSab2.chr15 T 32 T 64 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=16516.000000 s hg38.chr3_KI270937v1_alt 23503 64 + 165607 CTGACCAGGAATACACCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGA s nomLeu3.chr11 2794246 64 - 123690457 CTGACCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAGCCCAGCCACGAGA i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317170 64 + 91754291 CTGACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGA i chlSab2.chr15 T 64 T 126 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=2908.000000 s hg38.chr3_KI270937v1_alt 23567 34 + 165607 CTGACCAGGAATACCCCAACCCGGCCGCGAGACT s nomLeu3.chr11 2794310 34 - 123690457 CTGACCAGGAATACCCCAGCCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e chlSab2.chr15 91317234 126 + 91754291 T e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=8237.000000 s hg38.chr3_KI270937v1_alt 23601 32 + 165607 GACCAGGAATACCCCAACCCGGCCACGAGACT s nomLeu3.chr11 2794344 32 - 123690457 GACCAGGAATACCCCAGCCCAGCCACGAGACT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 32 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACT i chlSab2.chr15 T 126 T 32 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=15464.000000 s hg38.chr3_KI270937v1_alt 23633 66 + 165607 GACCAGGAATACCCCAACCCGGCCACGAGACTGACCAGGAATACCCCAACCCAACCACGAGACTGA s nomLeu3.chr11 2794376 60 - 123690457 GACCAGGAATACCCCAGCCCAGCCACGAGACTGACCAGGAATACCCCAACCCAACCACGA------ i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91317108 66 + 91754291 GACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGA i chlSab2.chr15 T 32 T 4396 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C a score=7195.000000 s hg38.chr3_KI270937v1_alt 23699 84 + 165607 CCAGGAATACCCCAACCCAACCACGAGACTGACCAGGAATACCCCAACCCGGCCGCGAGACTGACCAGGAATACCCCAACCCGG s chlSab2.chr15 91312778 84 + 91754291 CCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAACCATGAGACTGACCAGGAATACCCCAACCCAA i chlSab2.chr15 T 4396 C 0 e mm10.chr16 32760437 0 + 98207768 C e calJac3.chr17 73797898 0 + 74750902 C e canFam3.chr33 2294800 5 - 31377067 I e papAnu2.chr2 187295182 0 + 187378091 C e macFas5.chr2 192362332 14732 - 192460366 M e rheMac3.chrUn_JH291127 59907 0 - 111706 C e nomLeu3.chr11 2794436 0 - 123690457 C a score=64366.000000 s hg38.chr3_KI270937v1_alt 23783 48 + 165607 CCACGAGAAGACCTACAGGTGACGGGGGATGGGGGCTGACAATTCAGC s nomLeu3.chr11 2794436 47 - 123690457 CCACAAGAAGACCTGCAGGTGAT-AGGGATGGGGGCTGACAATTCAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59907 47 - 111706 CCATGAGAAGACCTGCAGGTGAT-GGGGATGGGAGCTGACAATTCAGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295182 47 + 187378091 CCATGAGAAGACCTGCAGGTGAT-GGGGATGGGAGCTGACAATTCAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91312862 47 + 91754291 CCATGAGAAGACCTGCAGGTGAT-GGGGATGGGAGCTGACAATTCAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797898 46 + 74750902 TCATGAGAAGACCTGCAGGTGTC-GGGG-TCGGGGCTAACAGTGCAGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32760437 45 + 98207768 CCATGTAAGGACTTGCAGGTGAC-AGGGACAGAGGTTG--AGTCCAGC i mm10.chr16 C 0 I 20 e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=72483.000000 s hg38.chr3_KI270937v1_alt 23831 63 + 165607 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAACAAGAGTGAGTCAAG-AGGGCCCGT s nomLeu3.chr11 2794483 63 - 123690457 CTTTGATTATAAAATCAGGCTGTAGGGGGTCTATCCTAACAAGAGTGAGTCAAG-AGGGCCCGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 59954 63 - 111706 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAACAAGAGTGAGTCAAG-AGGGCCTGT i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295229 61 + 187378091 CTTTGATTGTAAAATCA-GCTGTA-GGGGTCTATCCTAACAAGAGTGAGTCAAG-AGGGCCTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91312909 63 + 91754291 CTTTGATTGTAAAATCAGGCTGTAGGGGGTCTATCCTAACAAGAGTGAGTCAAG-AGGGCCTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73797944 64 + 74750902 ATTTGATTGTGAAATCAGGCTGCAGGGTATTGATCCTAACAGGAGGGAGTCCAGTAGGGCCTGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32760482 20 + 98207768 I e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=79379.000000 s hg38.chr3_KI270937v1_alt 23894 65 + 165607 CCTGTGCTCCTGGACTGGGTGAATAACTCCAATCAGAGGAA--ATGTGATGAAAGCTACTGCAGG-----------------------------AA s nomLeu3.chr11 2794546 67 - 123690457 CCTGTGCTCCTGGACTGGGTGAATAACTCCAATCAGAGGAAGCATGTGATGAAAGCTACTGCAGG-----------------------------AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60017 96 - 111706 CCTGTGCTCCTGGACTGGGTGAATAACTCCAGTTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAAGTGTGGACCATGTGCCTGCCATGGACGAA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295290 96 + 187378091 CCTGTGCTCCTGGACTGGGTGAATAACTCCAATTAGAGGAAGCACGTGATGAAAGCTACTGCAGGAAGTGTGGACGATGTGCCTGCCATGGACCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91312972 96 + 91754291 CCTGTGCTCCTGGACTGGGTGAATAACTCCAATGAGAGGAAGCACGTGATGAAAGCTACTGCAGGAAGTGTGGACCATGTGCCTGCCATGGACGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73798008 67 + 74750902 CCTGGGCTCCTGGACTGGGTTAGTAACGCCAAGCAGGGGAAGCCTGTGACGAAAGCCACTGTGGC-----------------------------AA i calJac3.chr17 C 0 I 413 s mm10.chr16 32760502 67 + 98207768 CCAACACTCCTGAATTAAGTTAATAATGCCAGCCTGTGAACGTGCAGAGCAGAGGCTGTCATAGC-----------------------------AA i mm10.chr16 I 20 C 0 e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=75996.000000 s hg38.chr3_KI270937v1_alt 23959 61 + 165607 GTGTGGACCGTGCCCCTGCCACGGACAGGGCAGTGTGGAGGCTCC-AAGAGGAAGAGACTCA s nomLeu3.chr11 2794613 61 - 123690457 GTGTGGACCATGCCCCTGCCACGGATAGGGCAGTGTGGAGGCTCC-AAGAGAGAGAGACTGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60113 61 - 111706 GTGTGGACCATGCCCCTGCCATGGACACGGCAGTGTAGAGGCTCC-AAGAGGGAGCGTCTCA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295386 61 + 187378091 GTGTGGACTGTGCCCCTGCCATGGACAGGGCAGCGTGGAGGCTCC-AAGAGGGAGAGTCTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313068 61 + 91754291 GTGTGGACCGTGCCCCTGCCATGGACAGGGCAGTGTGGAGGCTCC-AAGAGGGAGAGTCTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73798488 61 + 74750902 GCGTGGACTGTGCCCCTGCCACGGGCAGAGCAGTGTAAAGGCTCC-AAGATGGAGAGAACCA i calJac3.chr17 I 413 I 281 s mm10.chr16 32760569 62 + 98207768 ATACATTTTGTGTGCCTGCCGCTGACAAAGCTCTACCTAGGTTTCAAAGATGGACAGACCTG i mm10.chr16 C 0 C 0 e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=367082.000000 s hg38.chr3_KI270937v1_alt 24020 300 + 165607 CGCCTGTTCTCAAGAAGCTGCAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGGCCAGTTTGAGCTA--AGATGCTTGAGTTCAAGTCCAGAGGTCTTGGACGTCTGGGCCACGACCCTGCATTCTGCACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAATTGAACTTCACCTCAGAAAAGCTCACGGCAAAAATGCAGGCCTGGGACAGGGGAGGGCAGGCC-AT-TGGGTGGGCTGAAGTGGGCAGGGTCCTCAGGCAGAAAGTGGGGGG------------------------------------------------------CCCATGTGTAGGA s nomLeu3.chr11 2794674 302 - 123690457 TGCCTGTTCTCAAGGAGCTGCAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTCTGCTCTCTGGGCCACTTTGAGCTAAGAGACGCTTGAGTTCAAGTCCAGAGGTCTTGGACGTCTGGGCCACGACCCTGCATTCTGCACACTGCAGGCCTTCCTGCAGCCCAAGTTTGAATTGCACTTCACCTCAGAAGAGGTCATGGCAAAAATGCAGGCCTGGGACAGGGGAGGGCAGGCC-ATGTGGGTGGGCTAAAGTGGGCAGGGTCCCCAGGCAGAAAGT-GGGGG------------------------------------------------------TCCATGTGTAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60174 287 - 111706 TGCCTGTTCTCAAGGAGCTGCAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGACGCTTGAGTTCAAGTCCAGAGGTCTTGGACGTCTGGGCCAGGACTCTGCATTCTGCACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAATTGAACTTCATGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAGGGAAGGGCAGGCC-ATGTGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG------------------------------------------------------TCCATGTGCGGGA i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295447 287 + 187378091 TGCCTGTTCTCAAGGAGCTGCAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGATGCTTGAGTTCAAGTCCAGAGGTCTTGGACGTCTGGGCCAGGACTCCGCATTCTGCACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAATTGAACTTCATGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAGGGGAGGGCAGGCC-ATGTGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG------------------------------------------------------TCCATGTGCGGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313129 287 + 91754291 TGCCTGTTCTCAAGGAGCTGCAGATTAGGCATGGGGAGGTAAAAGTGGGCCCGAGTGGCTTTGCTCTCTGGGCCAGTTTGAGCTAAGAGACGCTTGAGTTCAAGTCCAGAGGTCTTGGACGTCTGGGCCAGGACTCTGCATTCTGCACACTGCAGGCCTTCCTGCAGCCCGAGTTTGAATTGAACTTCACGTCAGAAGAGCTCACGGCAAAAATGCAGGCCTGGGACAGGGGAGGGCAGGCC-ATGCGGGT---------------GGGTCCCCAGGCAGAAAGT-GGGGG------------------------------------------------------TCCATGTGCGGGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73798830 281 + 74750902 CGCCTGTCCTCAAGCAGCT-CAGATTAGGCAT-GGGAGGTGAAAGAGGGCCCGAGTGGCTCTGCCCTCTGGGACAGT----------------TTGAGTTCAAGTCCAGAGGTCTTGGATGTCATGGCCAGGACCCTGCATCCCACATGCTGCAGGCCTTCCTGCAGCCCAGGTTTGAATTGAACTTCACTTCAGAAGAGCTCATGGTAAAAACGCAGGCCTGGGACAGGGGAGGGTAGGCC-ATGTGGGTGGGCTAAAGTGGGCAGGATCCCCAGGCAGAA----GGAAG------------------------------------------------------TCCATGGGTGGGA i calJac3.chr17 I 281 C 0 s mm10.chr16 32760631 335 + 98207768 CATCTGTCTTTAAGGAGTTACAAGCTAGACATGGGAATGTAAAAGTAGACACAAATGGTCATACCATGCAAGCTGTTTTAAACTAAGGGATGTATCAATTCAATTCCAGAAGGCTTGGCTTTCTGGATAGAGCCCCTCTAGTTCACATGTCCCAGATTCTCC-----------------TTGATTTTAAAATCATAAGGGTTT---GTAAAAATTCACACTTGGGAAAAAGATGTACCGGTAGACATGGGC--AACGAAGTGATAAGCATCCCCATGAAGGAAGC-GGGGACCCCTTAGGGcagcaattttcaatcctgctaatgctgtgagcctttaatatggttccttgtgttgta i mm10.chr16 C 0 C 0 e canFam3.chr33 2294800 5 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=8148.000000 s hg38.chr3_KI270937v1_alt 24320 3 + 165607 GTG s nomLeu3.chr11 2794976 3 - 123690457 GTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60461 3 - 111706 GTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295734 3 + 187378091 GTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313416 3 + 91754291 GTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73799111 3 + 74750902 GTG i calJac3.chr17 C 0 C 0 s mm10.chr16 32760966 3 + 98207768 gtg i mm10.chr16 C 0 I 177 s canFam3.chr33 2294805 3 - 31377067 GTG i canFam3.chr33 I 5 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=639280.000000 s hg38.chr3_KI270937v1_alt 24323 413 + 165607 GGACCCTCGTTGGCTTGTTTTCATCTGCCCTCCTTTCCTAGGAATACGAGACGTTCTATGGTGAACACAGCCTGCTAGTCCAGCAGGCCGAGTCTTGGATTAGAAAGATGACAAACAACGGGGGCTACAAGGCCAGGTGGGCCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTCGGGGTGAGTAGACCCCTGGGCAGCTCCC-AGGAGCTATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCCACTCTTCCAAAATCCTCTCTGGCTCTAG-GAAAGATTGCTAATTATAGCAAGCCC--------CCCCACCGCCACCCC-CCCACTGCCAccactgttggctgagcactcaccgtgggcccggcctgtctcggccctttgcctacttgacctcaca s nomLeu3.chr11 2794979 394 - 123690457 GGACCCTCGTTGGCTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGGACACAGCCTGCTAGTCCAGGAGGCCGAGTCTTGGATTAGAAAGATCACAAACAACAGGGGCTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCTCACGCCTATCCTGCCCAGTGGACCCTCGGGGTGAGTAGACCCGTGGGCAGCTCCT-GGGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAACATCCTCTCTGGCTCTAG-GAAAGATTGCTAATTACAGCAAG----------------------------CCACTGCCAccactgttggctgagcactcaccgtgggcccggcctgcctcggccctttgcctacttgacctcact i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60464 412 - 111706 GGACCCTCGTTGGCTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGGCTGCCAGTCCTGCAGACCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCTTATCCTGCCCAGTGGACCCTCGGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGGGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGGCTCTAG-GAAAGATTGCTAATTATAGCAAGCCC--------ACCCACTGCCA-CCC--CCGCTCCTCCCACTGCTGGCAgaccactcactgtgggcccggccggcctcagccctttgcctacttgacctcacc i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187295737 412 + 187378091 GGACCCTCGTTGGCTTGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGGCTGCCAGTCCTGCAGGCCGAGTCTTGGATTAGAAAGATCACAAACAATGGTGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTCGGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATGTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCTTCCAAAATCCTCTCTGGCTCTAG-GAAAGATTGCTAATTATAGC-AGCCC--------ACCCACTGCCACCCC--CCGCTGCTCCCACTGCTGGCAGAGCACTCACTGTGGGCCCGGCCGGCCTCAGCCCTTTGCCTACTTGACCTCACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313419 420 + 91754291 GGACCCTCGTTGGCTGGTTCTCATCTGCCCTCCTTTCCTAGGAATACGAGACGCTCTATGGTGAACGCAGCCTGCCAGTCCTGCAGGCCGAGTCTTGGATTAGAAAGATCACAAACAATGGCGGCTTCAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAATGCCCACGCCTATCCTGCCCAGTGGACCCTCGGGGTGAGTAGACCCGTGGGCAGCTCCCAGGGAGCCATCTGGGAGTCAGACATCCTAGAATCCTAGGCAGGGGCTACTCGTCCAAAATCCTCTCTGGCTCTAG-GAAAGATTGCTAATTACAAC-AGCCCACCCGCTGACCCACTGCCACCCG--CCGCTGCTCCCACTGCTGGCGgagcactcgctgtgggcccggcccgcctcagccctttacctgcttgacctcacc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73799114 400 + 74750902 GGACCCTCGTTGGCTTGTTCTCATCTGCTCTCCTTTCCAAGGAATATGAGACGCTCTACGGTGAACACAACCCACTAGTCCTGCAGGCTGAGTCTTGGATTAGAAAGATTACAAACAACGGGGACTACAAGGCCAGGTGGACCCTAAAGGTCACGTGGGTCAGTGCCCACGCCTATCCTGCCCAGTGGAGCCTCGGGGTGAGTAGATCCGTGGACAGCTCCCTGGGAACCATCTGGGAGTCAGACATCCTCAAATTCTAGGCAGAGGCTACTCTTCCGAAGCCCTCTCTGGCTCTAG-GAAAGACTGCTAATTACAGCAAGCCC--------ACC-----CCACCCTGCTTACCGCCACCACTGTTGGCCGAGCACTCACCGT------GGCCTGCCTCGGCCCTTTGcctatttgacct---- i calJac3.chr17 C 0 C 0 s mm10.chr16 32761146 371 + 98207768 GGACCCTCACTTCCTTGTTCTTACCTACCTTCCTTTCCTAGGAATATGTCACATTTTACAATGAACACCATCAGCTAATCCGGGAAGTGGAGACTTTGATTAATGATTTCACAAGTAGCTGGGGCTACAGAGCCAAGTGGACACTGAAGGTCACCTGGGTCAATGTTCCTGCCTATACTGCCCAAGAGAGCTTTGGGGTGAGTGGATCATGGAACGGCTCCT-GTGGCCCTTTTGGGAGTCGAACATACCATTATCCTATGTGGGAGCTATCTTTTCAAGA-CCACCCTGGCTGGAGAAAAAAATTGCTGCTTATAGT-ATCCC----------------------------TCGAGAGCATGGTCTACTGAGTGCCCACAGTGGGCCAGGCCTGCCTTACG---------------------- i mm10.chr16 I 177 C 0 s canFam3.chr33 2294808 310 - 31377067 GGACCCTCATTTGCTTGCCTTC-TCTGCCTTCCTTTCCCAGGAATATGACACGCTCTATCGTGAACACAACCTGCTAGTCCAGCAGGTGGAGTCTTGGATTAATAAATTCACTGACACCAGGAACTACAAAGCCGAGTGGACCCTAAAGGTCACCTGGGTCAATGCCCCTGCCTATCCTGCCGGGCGGACCTTCGGGGTGAGTGGACCAAAGGACAACTCCCTGCGAACCATCTGGAAGTCATACGTCCTGGAACCCTAGGCAGGG-----------------TTCCCTGCCTCCCC------------------------CCC--------ACC--------------------------CTGTTTGCTGAGCACTCACCGA---------------------------TAC----------- i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=181032.000000 s hg38.chr3_KI270937v1_alt 24736 102 + 165607 gcagcccagcaaaccgggtattattaggctgaaacatagcaagtggcatttttgtaagtcaaaaatgtct----------ggctattcacaatttcacgtggctcagtctgg s panTro4.chr3_GL389630_random 0 102 - 103936 GCAGCCCAGCAAACCGGGTATTAttaggctgaaacatagcaagtggcatttttgtaagtcaaaaatgtct----------ggctattcacaatttcacgtggctcagtctgg i panTro4.chr3_GL389630_random N 0 C 0 s nomLeu3.chr11 2795373 102 - 123690457 gcagcccagcaaactgggtattattaggctgaaacatagcaagtggaatttttgtaagtcaaaaatgtct----------ggctattcgcaatttcatgtggctcaatctgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60876 102 - 111706 gcagcccagcaaaccagatattattaggttgaaacatagcaagtggcatttttgtaagtcaaaaatgtct----------ggctcttgggaatttcatgtggctcaactagg i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187296149 102 + 187378091 GCAGCCCAGCAAACCAGGTATTATTAGGTTGAAACATAGCAACTGGCAtttttgtaagtcaaaaatgTCT----------GGCTGTTGGGAATTTCATGTGGCTCAACTGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313839 94 + 91754291 --------gcaaactggatattattaggttgaaacatagcaagtggcgtttttgtaagtcaaaaatgtct----------ggctattgggaatttcatgtggctcaactggg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73799514 98 + 74750902 ----ctcagcaaaccaggtgtcattaggttgaaacacagtaggtggcatttctgtaagtcaaaaatgtct----------ggctattggcaatttcacgtggctcaatctgg i calJac3.chr17 C 0 C 0 s mm10.chr16 32761517 69 + 98207768 -----------------------------TCAGAAACAACAGCT-GCGTTTAC---AGGCAAGAATGTCT----------GGTGACTGACGACTTCATATGCCTTACACGAG i mm10.chr16 C 0 I 538 s canFam3.chr33 2295118 87 - 31377067 --------------------TCACTGGTTTAAAACATAGGAAATGGAATTTTTGTAAGTCAGAAGTGGCTGCCAGTAGCCGGCCATT-----TTTGAGATGGCTCAACCTga i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=797203.000000 s hg38.chr3_KI270937v1_alt 24838 427 + 165607 tattatgctccccattttacagatgaggaagacaatggttagagaggttaagtaactcgttcagagtcacgccactggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctctGAAGCACAGGCTCATCCAA--CGGGCACAGGGTGCGCCACACCATCTCCTCTGTCCTCCCTCCGAGGACCCCGCTCTTGTAGTCACCAAGTTCTTCCTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgtgTGCGCCTTCAGTGAACC-CCAGT-------------GTCATCCATGCTGTTTAGATGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGCTCTCTGGTATCTTGG s panTro4.chr3_GL389630_random 102 427 - 103936 tattatgctccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcagagtcacgccgctggcaaatggcaaagccaggcctg-agtggagcttcttctgactccagcctctggctcttAAGCACAGGCTCATCCAG--CGGGCACAGGGTGCACCACACCATCTCCTCTGTCCTCCCTCCGAGGACCCCGCTCTTGTAGTCACCAAGTTCTTCCTTATGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacaaaagttcactggtcacctactgtggacaa-----------cgtgTGCGCCTTCAGTGAACC-CCAGT-------------GTCATCCATGCTGTTTAGATGGAGGAGACAATTTGGGCAATGTCCTT--AAATATCCGCGCGGGAGCTAATGAAGCCTCCTCTCTAGCTCTCTGGTATCTTGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2795475 427 - 123690457 tattatgatccccattttacagatgaggaagacaatggttagagaggttaagtaacttgttcaaagtcacgctgctggcaaatggcaaagccaggcctgcagtggagcttcttctgactccagcctctggctcttAAGCACAGGCTCATCCAG--TGGGCACGGGGCACACCACACTGTCTCCTCTGTCCTCCCTCCGAGGACCCCGCTCTTGTAGTCACCAAGTTCTTCCTTACGCCTGGTCTAAAGTCACTCATTTCttcattcactcgacgaaagctcactggtcacctactgtgGACAA-----------CGTGTGCGCCTTCAGTGAACC-CCAGT-------------GTCATCCATGCTGTTCAGGTGGAGGAGACAATTTGGGCAATGTCCTT--AACTATCCGCAAGGGAGCTAATG-AGCCTCCTCTCTAGCTCTCTGGTATCTTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 60978 426 - 111706 tattctgatccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccact-gcaaatggcaacgccaggcctgcagtggagcttcttctgactccaGCCTCTGGCCATTAAGCATGGGCTCATCCAA--CGGGCATGGGGCACACCACACCATCTCCTCTGTCCTCCCTCCGAGGA-CCCGctcttgtagtcaccaagttcttccttatgtctgatctaaagtcactcatTTCttcattcacttgacaaaagttcactagtcacctaccgtgGACAA-----------CGTGTGCACCTTCAGTGAACC-CCAGT-------------GTCATCCATGCTGTTCAGGTGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACAAAGCCTCCTCTCTAGCTCTCTGGTATCTTGG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187296251 427 + 187378091 TATTCtgatccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgcCCCTGGCAAATGACAATGCCAGGCCTGCAGTGGAGCTTCTTCTGACTCCAGCCTCTGGCCGTTAAGCACAGGCTCATCCAA--TGGGCATGGGGCACACCACACCATTTCCTCTGTCCTCCCTCCGAGGA-CCCGCTCTTGTAGTCACCAAGTTCTTCCTTATGTCTGATCTAAAGTCActcatttcttcattcacttGACAAAAGTTCACTGGTCACCTACCATGGACAA-----------CGTGTGCGCCTTCAGCGAACC-CCAGT-------------GTCATCCATGCTGTTCAGGTGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACGAAGCCTTGTCTCTGGCTCTCTGGTATCTTGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91313933 426 + 91754291 tattctgatccacattttacagatgaggaagacaatggttagagaggttaagtaacttgctcaaagtcatgccactggaaaatggcaacgccaggcctgcagtggagcttcttctgactccaGCCTC-GGCCGTTAAGCACGGGCTCATCCAA--TGGGCATGGGGCACAGCACACCATCTCCCCTGTCCTCCCTCCGAGGA-CCCGctcttgtagtcaccaagttcttccttatgcctgatctaaagtcactcatTTCTTCATTCACCTGACAAAAGTTCACGGGTCACCTACCACGGACAA-----------CGTGTGCGCCTTCAGCGAACC-CCAGT-------------GTCATCCATGCTGTTCAGGTGGAGGGGACAATTTGGACAATGTCCTT--AAATATCCGCGAGGGAGCTAACGAAGCCTCCTCTCTAGCTCTCTGGTATCTTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73799612 436 + 74750902 gattcttatccacattatagggtggaggccgaccgtggtcagagagattaa-taacttgctc--agtcacga----agcagatggcagagccaggcctgcagtggaggttcttctgactccagcctctggctcttaagcacaaagccattcagtTTTGACATGGGGCTCCTGGCGCCCTCCCCTCTGTCCTCCCTCTGCGGACCCCgctcttgtagtcacaaagttcttcctcatgcctggcctaaagtcactcatTTCTTCATTCACTCAACAGAAGTTCACCGGTCACCTCCGGCGGACAA-----------GGCGTGTGCCTTCAGCAAACC-CCAGTGTCACCTGAGCCAGTCATCCATGCTGTTCAGGTGGAGGGGACAATTTGGGCAATGTCCTT--AAATGTCCCCCAGGCAGCTAATTAAGTCCCCTCTCGAGCTCTCTGGTATCTTGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2295205 436 - 31377067 tattattatccacgttttagagatgaggaggatgacggtgagagaggttagacaatctgctcaaggtcacccagctagaaagtgacaaagccaggcttggaatggaggct-ttctgacttccaactccagctctcagctgcaAAGCCAGCCAG--TGGCCAT-GGTCACAGCACACAGTGTCCTCAGTCTTCCGCCCGGGGACTCCGCTCTTACAG------------CCCCTGTGTGTGGTCTAAAGTCACTCGTTTCCTCATTGGTTCAAC--AAGTTCATTGGTTTCCTACTTTGTACAAGCACAGTGCTTGGCATCTGCCTTCAGAGAGCCTCCAGGCCCACCTCTGTGGTCCATCCACGATATTTAGGTTGAGGGGAC-ATTTGAACAATGTCCTTACAAATATCCCAGAGGAAGCTAAGTAGGCCTC-TCTC-GGCTCTCTGGGGTCGTGG i canFam3.chr33 C 0 C 0 e mm10.chr16 32761586 538 + 98207768 I e macFas5.chr2 192362332 14732 - 192460366 M a score=1419660.000000 s hg38.chr3_KI270937v1_alt 25265 672 + 165607 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATC-TCCCCTCCTGG------AAGAAAGTCACCA-AAAGGCAAATCCACCGT-------------------------------------GGTAAGTGC-----GTTCGCA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGC---CAGCATTTT-GGGCCCATGTCTTTGCTGTGGGCAGACCAGGAACAGGTGCTGTGC--GTGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACATAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCCCAGCGCTCAGGCAACCCGGTGCTCATGGGCTTCTCTAGGTAGGAT-GGGAGGGGCT----GTCAGCACTGAGCAGTTGGCAGGGAG-GGGTGTAGAGTCGGCTTT-CGCTGCACACACA----CTCCCATCCT--GGGGCAAGGCGGGAACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCAGGCATCTGGCTGCTTCCCACGACAAGAT---CACCCATTTGTCC-GCCATGCCCTTTCCCATCCCAGTCCCCGTG s panTro4.chr3_GL389630_random 529 672 - 103936 CTGA--TCTCAGGTTCT-------GGTAGCTTTCTCTAACAAACACTCATCTAACT---GAATTGTAACCCAGAACCCTTTATC-TCCCCTCCTGG------AAGAAAGTCACCA-AAAGGCAAATCCACCGT-------------------------------------GGTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCAAAACTTGC---CAGCATTTT-GGGCCCATGCCTTTGCTGTGGGCAGACCAGGAACAGGTGCTGTAC--ATGTCAGAGCAGGGCTGTGGGACGGGCGGGGGGACATAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-GCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCCCAGCGCTCAGGCAACCCGGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGCT----GTCAGCACTGAGCAGTTGGCAGGGAG-GGGTGTAGAGTCGGCTTT-CGCTGCACACACA----CTCCCATCCT--GGGGCAAGGCGGGAACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CACCCATTTGTCC-GCCATGCCCTTTCCCATCCCAGTCCCCGTG i panTro4.chr3_GL389630_random C 0 M 922 s nomLeu3.chr11 2795902 714 - 123690457 CTAA--TCTCAGGTTCT-------GGTAGCGTTCTCTTACAAACACTGATGTAACT---GAATTGTAACCCAGAACCCTTTATC-TCCCCTCCTGG------AAGAAAGTCACCA-AAAGGCAAATCCACCGTGGTGGATTCACACCCAGGGTGAAAAGTTCACACCCAGGGTAAGTGTGGTAAGTTCACA--CCCAGGGTGAAAGCTGCCCTCACTGACCCACAACTTGC---CAGCATTTT-GGGCCCATGCCTTTGCTGTGGGCAGACTAGGAACAGCTGCTGTAC--ATGTCCAAGCAGGGCTGTGGGATGGGTGGGGGGACATAAGAGAGGAGACCCCGGATCTCTCACAGGCATCCCTGTGTTT-GCTTCCACCCACCCCCAGAGCAACACCTACCAAGCCATCCTCTCCACGGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGAATGCAGTGGGACGTGGCCCAGCGCTCAGGCAACCTGGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGCT----GTCAGCACTGAGTAGATGGCAGGGAG-GGGTGTAGAGTCAGGTTT-CGCTGCACACACA----CTCCCATCCT--GGGGCAAGGCGTGAACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTACCACTGGGGCCAGGCATCTGGCTGCTTCCCATGACAAGAT---CATCCATTTGTCC-GCCATGCCCCTTCCCATCCCAGTCCCCGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 61404 672 - 111706 CTGATCTCTCAGGTTCT-------GGTAGCTTTCTCTTACAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTCTC-TCCCTTCCTGG------AAGAAAGTCACCA-AAAGGCAAATCCACTGT-------------------------------------GGTAAGTGT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGC---CAGCATTTT-GGGCCCATGCCTTTGCTGTGGGCAGACCAGGAACAGGTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGTGGACATAAGAGAGGAGACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCCCAGCGCTCAGGCAACCTCGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGTGGGGTTT-CACTGCACACACA----CTCCCACCCT---GGGCAAGATGTGAACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCGGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC-ACCACGCCCTCTCCCATCCCAGTCCCTGTG i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187296678 673 + 187378091 CTAATCTCTCAGGTTCT-------GGTAGCTTTCTCTTACAAACACTCATCTAACT---GAATTATAACCCAGAACCCTTTATC-TCCCTTCCTGG------AAGAAAGTCACCA-AAAGGCAAATCCACCGT-------------------------------------GGTAAGTGT-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACTTGC---CAGCATTTT-GGGCCCATGTCTTTGCTGTGGGCAGACCAGGAACAGGTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCGGGGGGACATAAGAGAGGAAACCCCGTATCTCTCACGGGCatccctgtgttt-tcttccacCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGACGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCCCAGCACTCAGGCAACCTCGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGGA--GGGTGCAGAGTGGGGTTT-CACTGCACACACG----CTCCCACCCT--GGGGCAAGATGTGAACCCTCCTGGCTGGTGCTTCTGACTCACGCTGACTCCAGCTCCCGCTGGGGCCGGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC-ACCACATCCTCTCCCATCCCAGTCCCTGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91314359 672 + 91754291 CTAATCTCTCAGGTTCT-------GGTAGCTTTCTCTTGCAAACACTCATCTAACT---GAATTAGAACCCAGAACCCTTTATC-TCCCTTCCCAG------AAGAAAGTCACTG-AAAGGCAAATCCACCAT-------------------------------------GGTAAGTGC-----GTTCACA--CCCAGGGTGAAAGCTGCCCTCATTGACCCAAAACATGC---CAGCATTTT-GGGCCCACGCCTTTGCTGTGGGCAGACCAGGAACAGGTGCTGTAC--ATGTCCAGGCAGGGCTGTGGGACGGGCAGGGGGACATAAGAGAGGAAACCCCGGATCTCTCACGGGCATCCCTGTGTTT-TCTTCCACCCACCCCCAGAGCAACACCTACCAGGCCATCCTCTCCACAGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGTGGCCCAGCGCTCAGGCAACCTCGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGTT----GTCAGCACTGAGCAGATGGCAGGTA--GGGTGCAGAGTGGGGTTT-CACTGCACACACG----CTCCCACCCT--GGGGCAAGATGTGAACCCTCCTGGCTGGTGCTTCTGACTCACACTGACTCCAGCTCCCGCT-GGGCCGGGCATCTGGCTGCTTCCCACGACAAGAA---CACCCATTTGTCC-ACCACGCCCTCTTCCATCCCAGTCCCCGCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73800048 634 + 74750902 CTCAGCGATCAGGTTCT-------GGTAGCTTCCTCTTATAAAGACTTATCTAACT---GAATTATAACCCAGAACCCTTTATC-TCCCCTCCTGG------AAGATAGTCACAA-AAAGGCAAATACACCGT-------------------------------------GGTAAGTGC-----TTTCCCA--CCCAGGGTG-ATGCTGCCCTAGCTGACCAGAAACTTGC---CCGCCTTTTGGGGCCCATGCCTTTGCTGTGGGCAGACCTGGAACAGGTGATGTGC--ACGTCAGAGCAGCGCTGTGGGACGGGTGGGAGGACGTAAGAGAGGAGACCCCGG-TCACTCACCGGCATCCCTGTGTTT-GCT----------CCCAGACCAACACCTACCAGGCCATCCTCTCCACGGACGGAAGCAGGTCCTATGCCCTGTTTCTCTACCAGAGCGGTGGGATGCAGTGGGACGCGGCCCGGCACGCAGGCAGCCCGGTGCTCATGGGCTTCTCCAGGTAGGAT-GGGAGGGGCT----GTCCGCACTGAGCAGATGGCAAGAG--GGGTGCAGAGCGGGGTTT-CACTGCACACACA----TGCCCATCCT---GGGCCGGGCATAAACCCACCTGGCTGATGCTTCTGACTCACTCTGGCT---------------------------GCTGCTTCACATGAAAAGAT---CACCCATTTGTCC-ATCATTCCCTTTCCCATCTGAGTCCCCGTC i calJac3.chr17 C 0 C 0 s mm10.chr16 32762124 586 + 98207768 ttga--actcaggacctttggaagagcagtcagtgctcttaaccactcagccatctctccagccccAACCCACAGCCCTTTATT-TCCTCTCCCTGAAAAAAAAAAAAGTTACAAGGAAGGAAAATAGGGCAT-------------------------------------GCTAAGATC-----TTCTGCA--CCCAGGGTAAGTGTTACTCTAAT-----CACAGCAAGCACGCAGCAGGTG-CAGCCCA-------------GATGGACCAGGAATAGGTGACGTCCCTGTGTCTGCTCAGAGGTGTGGGA----------GACACCAGGGAGGAAACCTCAGATCTCTCAATGACATCTGTTTGT----CTCTCCCCAACTTCCAGACCAATACCTACCAAGCCATCCTCTCCACAGATGGGAGCAGGTCCTATGCCCTGTTTCTCTACCAGAACAGTGGCATGAGGTGGGATGTGACCCAGGAACCATACAACCGGGTGCTCATGGGCTTCTCCAGGTAAGAC-GGGATGGGCTTGCCGTCAGCACTGGACTGC-----------GAGAGCTAAGTGTGCCCT-------GCTCACA----CTCCTATCCC-----------------------------GTCCTT----------------------------------GAATATGTAGCTCTTCCTGATG--AAACC---CCCCCACTCATCCTGGCA---CTGTCCCCATTCCAACACTTGTG i mm10.chr16 I 538 C 0 s canFam3.chr33 2295641 652 - 31377067 CTAATCTTTCTGAGTCC-------TGAGGCTTTCTCACACAAACTCTCTTCTGACT---GGATCCTAAACCAGAACGCTTTATCACCCCTTCCTGG------ACAGAAGTCACAAAAAAGGCAGGTCCACCAC-------------------------------------GGTAGACGC-----TTTGACAGCCCGGGGGGGAAAGCTGCCCTG--------------------CACAATCCC-AAG--------TTTGCTCTGAGTAGGCTAGGGAAAGAGGATGTGT--GTATCGGGGCAGGGTTGTGGGGAGGGTGATGGGACATTGGGGAGGAGACCCCAGATCGCTCACAGGCATCCCTGTGTTTGTCTTCAACAAACCTCCAGACCAGCACCTACCAGGCCATCCTCTCCACAGACGGCAGCAGGTCCTACGCCCTGTTTCTTTATCAGAGCGGCGGCATGCAGTGGGATGTGACCCAGCGCCCAGGCAACCCGGTGCTCATGGGCTTCTCCAGGTAGGACAGGGATGGACG----GCCAGCGCTGAGCACGTAATGGGAGGTGGTGGCAGGGTCAGGTTTTTGAGGCACACACACCTCCTCCCATCCCCCGGGACAGGGTATGAATCCTTCTTATTGACGTTTCTGACCCACGCCTGCTCCAATCCCCCCT-----------TCTTGCTGTTTCAAATGAAAAGATACCCATCCACTGG----GCCATTCTCTTTCCCACCCCAGTACTCATG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192362332 14732 - 192460366 M a score=920910.000000 s hg38.chr3_KI270937v1_alt 25937 765 + 165607 AGTTGTAATCATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATATCG-----TGataataacagccaagactgatgacactaac-acttcgtgtac--attactgcatgtcatgatcacagccacc-ccacgaggcagatactatt-------tatcatccccattctacagatcaggaaactgagatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC-------CTGAGAATTACCCACTTATCCAGGGGGCACCCAAAAGCTTATATGGAGC----CGGTGGTGAAGGGAG--AGAGGAGGCACGGGGCTGTGGGCGGTTGAAATGTGGATTCCCGT-----GTGTGGGAGGCTGTCTCCGATGTAGCAGTG------------CGCCATCTCTG--------TTCCCATA-TGCTGGGGTGTGGCAATCAGTACGAAGGCCAC--------------------------------------------ATGTCTTTTGTTCTTGATAATTGCTGCAAAT-GTCTTCTCTTACATT-GAGTGTGTTCA-GGTTACCCCTTTGATTACACTGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAAAGGAGGGGAATTACCCAACT--CT--------AGGAATTTCACACGGTCC-AGGTACACCCAAGGAAGGTGTCACGCAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGGTGGGGCTGCAGGCGGC s nomLeu3.chr11 2796616 765 - 123690457 TCTTGTAATAATGCCCAGAGCTTTGGCTTCCCTGA----TTTCCACTGACATTAGCTGGCCTCTCTTACCTTCTCAAATATCG-----TGATAATAACAGCCAAGACTGATTACActaac-actttatgtac--cttattgcatgtcatgatcacagccact-ccatgaggcagatactact-------taccatccccattctacagatcaggaaactgagatacaaatagactagcaatttgcctaaagtcccagagctgggaagtggcaacatggagatttgaacccagacatctgaggctagaatctgccttcctgacTTC-------CTGCGAATTACCCACTTATCCAGGGGACACCCAAAAGCTTATATGGAGC----CGGTGGTAAAGGGAG--AGAGGAGGCACGGGGCTGTGGGTGGTTGAAATGTGGATTCCTGT-----GTGTGGGAGGCTGTCTCCGACGCAGCAGTG------------CGCCATCTCTG--------TTCCCATA-TGCTGGGGTGTGGCAATCAATACGAAGGCCAC--------------------------------------------ATGTCTTTTGTTCTTGATAATTGCTGCAAATGGTCTTCTCTTACATT-GAGTGTGTTCA-GGTTACCCCTTTGATTTCACTGCTTTCACTAGTTTCTTGGTGTGCTATGAAGGAGAA---AGGGGAGTTCCCCAACTGCCT--------AGGAATTTCACACGGTCC-AAGTACACCCGAGGAAGGTGTCACGCAGGGGTGCATCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTTCCCACTCTGCAGCAGGCATCCAGGGTGGGGCTGCAGGCGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 62076 796 - 111706 CGTTGTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTACCTTCTCAAATATCA-----TGATAATAACAGCCAAGACTGATGACActaac-acttcacgtac--attattgcatgtcatgatcacaaccacc-ccatgaggcggatacgatt-------tatcatccccactctacagatcaggaaactgagatacaaatagactgacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgccttcccgacTTC-------CTGAGAAT----------TCCAGGGGGCA-CCAAAAGCTTATAAGGAGC----TGGTGGTGAAGGGAG--AGAGGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTCCGT-----GTGTGGGAGGCCGTCTCCGATGCAACAGTG------------CACCGTCTCTG---------TCCCATA-TGCTGGTGTGTGGCAATCAGTGCAAAGGCCACATGTCTTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTTGTCCTTGATAATTGCTGCAAATGGTCTTCTCCTACACT-GAATGTGCTCA-GGTTACCCCTTTGATTACACTGCTTTCACTGGTTACTTGGTGTGCTGTGAAGGTGAAAGGAGGGGAATTACCCAACTGCCT--------AGGAATTTCACATGGTCC-AAGTACACCCAAGGAAGGTGTCACACAGGGGTGCGTCATCCTGCTTGTGTCAGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGGCTACAGGCCGC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187297351 795 + 187378091 CGTTGTAATAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACATTAGCTGGCCTCTCTTATCTTCTCAAATATCA-----TGATAATAACAGCTAAGACTGATGACACTAAC-ACTTCACTTAC--ATTATTGCATGTCATGATCACAACCACC-CCATGAGGCGGATACGATT-------TATCATCCCCACtatacagatcaggaaactgagataCAAATAGACTGACAATTTGCCTAAAGTCCCAGAGCTGGGAAGTGGCAATGT---GATTTGAACCCAGACATCTGAGGCTAGAATCTGCCTTCCCGACTTC-------CTGAGAAT----------TCCAGGGGGCA-CCAAAAGCTTATAAGGAGC----TGGTggtgaagggag--agaggaagcacGGGGCTGTGGGCGGTTGAAATATGGATTTCCGT-----GTGTGGGAGGCCGTCTCCGATGCAACAGTG------------CACCGTCTCTG---------TCCCATA-TGCTGGTGTGTGGCAATCAGTGCAAAGGCGACATGTCGTGTtcttcacttgatcttagccaaaaggccgagaagcgatgTCTTTTGTCCTTGATAATTGCTGCAAATGGTCTTCTCCTACACT-GAGTGTGCTCA-GGTTACCCCTTTGATTACATTGCTTTCACTGGTTACTTGGTGTGCTATGAAGGTGAAAGGAGGGGAATTACCCAACTGCCT--------AGGAATTTCACATGGTCC-AAGTACA-CCGAGGAAGGTGTCACACAGGGGTGCGTCATCCTGCTTGTGTTCGGGA-GGAGGAAAAGCCCAAGAGTCCCCACTCTGCAGCAGGCACCCAGGATGGGGCTACAGGCCGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91315031 796 + 91754291 CGTTGTAGTAATTCCCAGAGCTTTGGCTTCCCTGA----TTTCCACT-ACACTAGCTGGCCTCTCTTACCTTCTCAAATATCA-----TGataataacagccaagactgatgacactaac-acttcatgtac--attattgcatgtcatgatcacaaccacc-ccatgaggcagatacgatt-------tatcatccccactctacagatcaggaaactgagatacaaatagactgacaatttgcctaaagtcccagagctgggaagtggcaatgt---gatttgaacccagacatctgaggctagaatctgccttcccaacTTC-------CTGAAAAT----------TCCAGGGGGCA-CCAAAAGCTTATAAGGAGC----TGGTGGTGAAGGGAG--AGAGGAGGCACGGGGCTGTGGGCGGTTGAAATATGGATTTCCGT-----GTGTGGGAGGCCGTCTCCAACGCAACAGTG------------CACCGTTTCTG---------TCTCATA-TGCTGGTGTGTAGCAATCAGTGCAAAGGCCACGTCTTTTGTTcttcacttgatcttagccaaaaggccgagaagcgatGTCTTTCGTTCTTGATAATTACTGCAAATGGTCTTCTCCTACACT-GAGTGTGCTCa-ggttacccctttgattacactgctttcactagttacttggtgtgctatgaaggtgaaaggaggggaattacccaactgcct--------aggaatttcacatggtcc-aagtacatccgaggaaggtgtcacacaggggtgcgtcatcctgcttgtgtcaggga-ggaggaaaagCCCAAGAGTCCCCACTCTGCAGCAGGCACCCGGGATGGGGCTACAGGCCGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73800682 761 + 74750902 -ATTGTAATAATT-CCAGAGCTCTGGCTTCCCTGA----TTTCCGCTGACATCAGCTGGCCTCTCTTAACTTCTCAGATATCA-----CGATAGCAacatgcaaggctgattgcactaac-acttcgtggac--attgttgcatttgcttctcacgacc-cc-ccatgaggcagacactatt-------tattatccacattctacggatcgggccactgagctacaaatagactagcaatttgcctcaagtcccagagctgggaagtggcaacatggaggtttgaacccagacgtctgaggctagaatctgccttcctgacTTC-------CTGAGAATTACTCACTCACCCAGGGGGCACCCGAAAGCTTAAACGAAGC----CGGTGGTGAGGGGAG--AGAAGAAGCAGGGGGCCGTGGGTGGTTGGAATGTGGATTCCCCTGTCTCGTGGAGGAGGCTCTCTCCGACGTGACGGTGCCCACTTCTGCTCCCTGCTTCTG--------TTCCCACA-GGCTGGTGTGTGGCAGTCGGTGTGAAGGTCAC--------------------------------------------ATGTCTCTTGTTCTTGATCATTGCAGCGCATGTTCTTCCCTTACAAC-AAGTGTGTTCA-GGTCACCCCTTTAGTCACACTGCTGTCGCTAGTT-TTTGGTGTGCTATGAAGGAGTAAGGAGTGGAAGTGCCCAACTACCT---------GGGATGTCACATGGTCC-ACGTACGCCCGAGGAAGGTGCCACGCAGGGGTGCACCATCCCACTTGTGTCAGGGAGGGAGGAAAAGCC--------------------CAGGCACCCAGGGTGGGGCTGCAAGCAGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32762710 618 + 98207768 ---TACCGGAGTCCTTTAACCTTTGACCTCCTTGGTTTCTTTCCACTGACATTAGCTGA----------CTTCTCAGCTAGTAGCCACTTATTATACCTATTACGACATAT-ACATTA-----TTTATTTACTGTTTGTTTTCTTTGGTGATCACAGCCACCAACGATAGTTGacaactatcctacagataaaacccttatcctataggtaaggaaacctaggttcaagcagatgagtcatttgcccaaagtcagagagtttcaaagtggcaaagtgggcatcagaacacaggccctccagaGTGGAATTTGTGATCC--------------------------------------------ACGCAGGTT--------GT----TAGATGGGAAGGAGG--TGAGGAGA---AGGGCCGTGGCTGG------------------------CTGTGGCA--------------------TG------------ATCTGTTACTG------------------------------------------------------------------------------------------------------------GGTGGTTGTCACAGATGGGTTTCTTTTACATTAGGGTGTGTTCG-GCCTGCC-------TAGCATGGCTTTGACTGACT-TTTGATGTGCAATGAAGGAAGAAAGCATGTAATTACTCAGGCAGCT--------AGCAATTCCACACTGTCCTCAGTAAACCCAACT-GGACATCATGCATGTATTTGTCCTCTAGCCTGCGTGACTAT-AGAGCAAAGACC-AGGAGTCGCTTTCTGTGGGCATGCTCCTGTAGTAGCAGTG-AGGCTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2296293 737 - 31377067 CCTTATAATAATTCCCGGAGCGTTGACTTCCCCGA----GTTCTACTGTCCTTAGCTAACCTCTCTCGACCTCTCAAGTACTG--Taataataataatagccaccatttattacactaactacttaatatgc--attatttcatttaatcatcaccaccacc--catgaaggggctactctt-------tac--tgcccattctacagataagaaagcggaggta-aaatggatctggaa-ttgccccaagtcccagagctg-gaggtggccaagcaggaactggccccccgccggttgaggccaagctctgccttcgtgacccctGGTGGGCTGAGCACCAGCCTGTGACCCGGGGCACC-CGGGGGGCTTGGGCGGGGTCCGGTGGGGGGAAAGGCAGACAGAGCAGGCAAGGGGCTGCGGGGGC----GCCGCAGACTCCTGT-----GTGTGGGG-------------------GTGA-----------CTCAGTCTCTGACCGCGGGTCTCAACACCGCTCGGGTGAGCCACCGGTTGTGAAGGGCAC----------------------------------------------GTCCCGTACCCCCG--------------------------------GCTTGTGACCAGGGCTGACCCCGTCATTCCACCGCCTTCGCTCTCTTTCTGATGCGCTTAGAGGGGCAAAGGGCTGGAATCGGCCGGCTCGCTGGGGCGCGAGGGCTGTCGCACGTCCC-GAGTACGCCTTGGGCGGGTGTCCGCC--GTGTGGCCCGCCTGGCCCGTGTCACACA-GGGGGTGGGGGGCTGCAGGCTCCCCTCCCAGAGAAGCGCC--GGGGGGTGCTCCTCGCGGC i canFam3.chr33 C 0 I 66 e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3_GL389630_random 1201 922 - 103936 M a score=49576.000000 s hg38.chr3_KI270937v1_alt 26702 46 + 165607 TG-CTCCAGGCTTTCCTCCTTCCCGGGCCATGCTCGGACCCCACACC s nomLeu3.chr11 2797381 46 - 123690457 CG-CTCCAGGCTTTCCTCCTTCCCGAGCTCTGCTCGGACCCCATACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 62872 45 - 111706 CG-CTCCAGGCTTCTCTCCTTCCTGAGC-ATGCTCGGACCCCACACC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187298146 45 + 187378091 CG-CTCCAGGCTTCTCTCCTTCCTGAGC-ATGCTCGGACCCCACACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91315827 45 + 91754291 CG-CTCCAGGCTTCTCTCCTTCCTGAGC-GTGCTTGGACCCCACACC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73801443 46 + 74750902 CGTTTCTAGGCTTTCCTCTTCCCCGAACCGCGCTCAAACCCCACA-C i calJac3.chr17 C 0 C 0 s mm10.chr16 32763328 34 + 98207768 TG-CTGCAGACTTCCTTCCGTCCTGGAC------------CCACACT i mm10.chr16 C 0 C 0 e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3_GL389630_random 1201 922 - 103936 M a score=18602.000000 s hg38.chr3_KI270937v1_alt 26748 20 + 165607 TGGGGACggtgatggcgata s nomLeu3.chr11 2797427 20 - 123690457 TGCGGACGGTGATGGCGATA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 62917 20 - 111706 TGCAGAtggtgatggccata i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187298191 20 + 187378091 TGCAgatggtgatggccata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91315872 20 + 91754291 TGCAGAtggtgatggccata i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73801489 16 + 74750902 TGCAGACGGTGATGGA---- i calJac3.chr17 C 0 C 0 e mm10.chr16 32763362 0 + 98207768 C e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M e panTro4.chr3_GL389630_random 1201 922 - 103936 M a score=28565.000000 s hg38.chr3_KI270937v1_alt 26768 22 + 165607 ---gtggtggtggtggtggtggtgg s panTro4.chr3_GL389630_random 2128 22 - 103936 ---gtggtggtaattgtggtgatgg i panTro4.chr3_GL389630_random M 922 C 0 s nomLeu3.chr11 2797447 22 - 123690457 ---gtggtggtggtgatggtggtgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 62937 22 - 111706 ---gtggtggtcgtggtggcgatgg i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187298211 22 + 187378091 ---gtggtggtcatggtggcgatgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91315892 22 + 91754291 ---gtggtggtcgtggtggcgatgg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73801505 20 + 74750902 AAGGTGCTGG-----GTGGTGGTGG i calJac3.chr17 C 0 I 300 e mm10.chr16 32763362 0 + 98207768 C e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=103430.000000 s hg38.chr3_KI270937v1_alt 26790 122 + 165607 tggtggtagtggcggtggaggtggcagtggcgatggtgatggtggtgatggtggtggtgatggtggtgatggtggtggtgttgggggtgatggtggcgatggtggtggtggtgatggtggtg s panTro4.chr3_GL389630_random 2150 119 - 103936 tggtggtggtggtggtgccgatgatggtggtgatggtggtgatggtggtgttggaggtgatggtggcgatggtggtggtgatgg---tggtggtggtgatggtggtggtggcaatggtggta i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2797469 122 - 123690457 tggtgatgttggtggcggtgatggcggcagtggcggtggcgatggtggtggtggaggtggcaatggtgatggcggtggtggtggcagcaatggtagtgttggcggtggcgatggtggtggca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 62959 122 - 111706 tggtagtgttggtggtggtggcggtgatgatagggttggtgttgatggtggtgctgatagtggtgggggtggaagtggtgatggtggtagtggtggtgatggtggtgattttggtggtagtg i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187298233 122 + 187378091 tggtagtgttggtggtgatggcggtgatgatagtgttggtgttgatggtggtgctgatagtggtggtggtggaagtggtgatggtggtagtggtggtgatggtggtgattttggtggtagtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91315914 118 + 91754291 tggtagtgttggtggtggtggcggtgatgatagtgttggtgttgatggtggtgctgat----gtggtggtgaaagtggtgatggtggtggtggtggcgatggtggtagtgttggtggtggtg i chlSab2.chr15 C 0 I 6988 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e macFas5.chr2 192362332 14732 - 192460366 M a score=92642.000000 s hg38.chr3_KI270937v1_alt 26912 185 + 165607 gtggtggtgatggtggtgatgatggtggtggcaatgatggtggtgatggtggtggtggtggtgatggtggtggtggcgatggtgatggtggtggtgatggtggtggtggccgatggtggtattttttggggggtg--gccagtgatggtggtgatggtgatggtggtggtggtggtggtggcgatgg--- s panTro4.chr3_GL389630_random 2269 175 - 103936 gtgttgggtgtggcggtgatggtggtggtggtagtgttggtggtg---gtgatggtgatggtgatggtggtgatggtgatggtggtggtggtggcgatggtggtggtg----atggtggtgtt-----gggggtgatggtggcgatggtggtggtgatggtggtggtggttatggtggtgatgatgg--- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2797591 175 - 123690457 atggtggtgatggtggcgatggtggtggtggtggtgatggtggtg---atggtggtggtggtggtggtgatggtggcgatggtggtggtggtggtggtggtggtgatg----gtggcgatggt-----ggtgatgttggcaatggtggtggtggcgatggtggtgatggtggtggtggtggtgatgg--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63081 160 - 111706 ---ttggcagtggtggtggtggc---agtggtggcgatggtggta---gtgttggtgttggtggtagtgctgatggtggtagtgttggtggtggtggtggaagtggtg----atggtggtaat-----ggtggtg------------atggtggcgatggtggtagtggtggtggtggtggtggcggtgg i rheMac3.chrUn_JH291127 C 0 I 259 s papAnu2.chr2 187298355 158 + 187378091 ---ttggcagtggtggtggtggcggtggtggtggcgatggtggta---gtgttggtgttggtggtggtgctgatggtggtagtgttggtggtggtggtggaagtgtt------tggtggtaat-----ggtggtg------------atggtggcgatggtggtagtgttggtggtggtggcaatgg--- i papAnu2.chr2 C 0 C 0 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=25799.000000 s hg38.chr3_KI270937v1_alt 27097 37 + 165607 tggtggtgatggtggtgatggtggtggcaatggtgat s panTro4.chr3_GL389630_random 2444 34 - 103936 tggtggcgatggtggtgatggtggtgg---tggtggt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2797766 37 - 123690457 tggtggtgatggtggtggtggtggtagtggtggtggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63500 37 - 111706 tggtggtggtggcggtggtggtggtggcaatggtggt i rheMac3.chrUn_JH291127 I 259 C 0 s papAnu2.chr2 187298513 37 + 187378091 tggtagtgttggtggtggtggtggaggcggtggtggt i papAnu2.chr2 C 0 M 1652 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e chlSab2.chr15 91316032 6988 + 91754291 I e macFas5.chr2 192362332 14732 - 192460366 M a score=4017.000000 s hg38.chr3_KI270937v1_alt 27134 10 + 165607 gatggtggtg s panTro4.chr3_GL389630_random 2478 10 - 103936 gatggtggTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2797803 10 - 123690457 gatgttggcg i nomLeu3.chr11 C 0 I 3 s rheMac3.chrUn_JH291127 63537 10 - 111706 agtggtggtg i rheMac3.chrUn_JH291127 C 0 C 0 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e chlSab2.chr15 91316032 6988 + 91754291 I e papAnu2.chr2 187298550 1652 + 187378091 M e macFas5.chr2 192362332 14732 - 192460366 M a score=72026.000000 s hg38.chr3_KI270937v1_alt 27144 124 + 165607 gtggtgatggtggtggtgatggtggtg------gcaatggtaatggtgatggtgatgatggtggtggcgatggtggtggtgatggtgatggtggtggtgatggtgatggtggtggtgatggtgatggtgg s panTro4.chr3_GL389630_random 2488 118 - 103936 GTGGCAATGGTGGTAGTGTTGGGTGTG------GCAGTG---Atggtggtggtggtagtgttggtgg---tggtgatggtgatggtggtgatggtgatgatgatggtggtggtggtgatggtgatggtgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343061 125 - 202140232 gtgatgatggtggtggtgatggtggtg--tggtgtgatggtgatggtggtggtggtggaggtggtag---tgttggtggtggtgatggtggtggtggaggtggtgttggtggtggtgatggtggtggtgg i ponAbe2.chr3 N 0 C 0 s nomLeu3.chr11 2797816 121 - 123690457 gtgatgttggcaatggtgatggtggtg------atggtggtggcgatggtggtggtagtggtggtgg---tgatggtggcgatggtggtggtagtgttagcggtgatggtggtggcgatggtggtgatgt i nomLeu3.chr11 I 3 C 0 s rheMac3.chrUn_JH291127 63547 127 - 111706 gtggcgatggtggtagtgttggtggtggtggaggcggtggtggtggtggtggtgatggtggtggtgg---tggaagtggtgatggtggtagtggtggtagtggtgatggtggttgtggaggtggtgatgg i rheMac3.chrUn_JH291127 C 0 C 0 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e chlSab2.chr15 91316032 6988 + 91754291 I e papAnu2.chr2 187298550 1652 + 187378091 M e macFas5.chr2 192362332 14732 - 192460366 M a score=34893.000000 s hg38.chr3_KI270937v1_alt 27268 45 + 165607 tggtagtgttggtggtggtggtggtgatggtgatggtgatggtag s panTro4.chr3_GL389630_random 2606 39 - 103936 tggtagtgttggtggtggtg------atggtgatggtggtggtag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343186 39 - 202140232 aggtggtgttggtgatggtg------atggcggcgatggtggtgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2797937 39 - 123690457 tggcaatggtggtgatggtg------atggtggtggcgatggtgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63674 45 - 111706 tggcagtgttggtagtgttggtggtggtggtggtggtgatggtag i rheMac3.chrUn_JH291127 C 0 I 12 s chlSab2.chr15 91323020 45 + 91754291 tggtggtggtggtggtggaagtggtgatggtggcagtgttggtag i chlSab2.chr15 I 6988 I 3 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e papAnu2.chr2 187298550 1652 + 187378091 M e macFas5.chr2 192362332 14732 - 192460366 M a score=44343.000000 s hg38.chr3_KI270937v1_alt 27313 36 + 165607 tgttggtggtgacgatgatggtggtggtggtggtag s panTro4.chr3_GL389630_random 2645 33 - 103936 tgttggtggtga---tgatggtggtggtggtggtag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343225 36 - 202140232 tggtggaggtggtagtgttgatggtggcgttggtgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2797976 36 - 123690457 tgatgttggcaatggtggtgatggtgatggtggtgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63731 36 - 111706 tggtggtggtggtggtggcggtggaggtggtgatgg i rheMac3.chrUn_JH291127 I 12 C 0 s macFas5.chr2 192377282 36 - 192460366 tgttggtggtggtggtggcggtggaggtggtgatgg i macFas5.chr2 M 14732 C 0 s chlSab2.chr15 91323068 36 + 91754291 tggtggtggtggtggtggcgatggaggtggtgatgg i chlSab2.chr15 I 3 C 0 e mm10.chr16 32763362 0 + 98207768 C e calJac3.chr17 73801525 300 + 74750902 I e canFam3.chr33 2297030 66 - 31377067 I e papAnu2.chr2 187298550 1652 + 187378091 M a score=32841.000000 s hg38.chr3_KI270937v1_alt 27349 20 + 165607 tgctggcgatggtggtggtg s panTro4.chr3_GL389630_random 2678 20 - 103936 tgctggcgatggtggtggtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343261 20 - 202140232 tggcgatggtggtggtggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2798012 20 - 123690457 tgatggtggtggtggtggtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63767 20 - 111706 tggtagcgttggtgttggtg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192377318 20 - 192460366 tggtagcgttggtgttggtg i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91323104 20 + 91754291 tggtagtgttggtggtggtg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73801825 20 + 74750902 TGCAGACGGTGATGGAGATG i calJac3.chr17 I 300 C 0 e mm10.chr16 32763362 0 + 98207768 C e canFam3.chr33 2297030 66 - 31377067 I e papAnu2.chr2 187298550 1652 + 187378091 M a score=867839.000000 s hg38.chr3_KI270937v1_alt 27369 391 + 165607 gtggtAGCAGCAGTGGCagcatctgttgtatcaaggcctcactcagttctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtagatgccactgtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtaacttgtctgtggtcaccaagctagtaagtggggggatcagcagttgaatccatcactgcctaactccagaaactgggtcttaaccatcacaatacactgtccctAGAGTCTGTCCCGCTCCAAACCCTCTGCTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGTTGTTTTCACGCCCCTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGAT s panTro4.chr3_GL389630_random 2698 391 - 103936 gtggTGGCAGCAGTGGCagcatctgttgtatcaaggcctcactcagttctgagggatttgcagatgttactgcatttaatcctcacaatacagtgaggtaggtgccactgtaatcctttttatacagatgtgaaaag-taagaatcagagagggtcagtaacttgtctgtggtcaccaagctagtaagtggggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccatcacaatacactgtccctAGAGTCTGTCCCGCTCCAAACCCTCTGCTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGTTGTTTTCACGCCCCTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343281 391 - 202140232 gtggtggcagcggtggCagcatctgttgtatcaaggcctcactcaattctgagggatttgcagatattactgcatttaatcctcacaatacagtgaggtaggtgctactgtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtgacttgtccgtggtcaccaagctagtaagtgtggggatcagcagttgaatccatcactgtccaactccagaaactggctcttaaccatcacaatacactgtccctAGAGTCTGTCCCGCTCCAAACCCTCTGCTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGCTGTTTTCACGCCCCTGTCTCATGACCAAGCGGACCTGCCAGTTTCTTGCAGCTAGCGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2798032 391 - 123690457 gtggtggCAGCAGTGGCagcatctgttgtatcaaggcctcactgagttctgagggatttgcagatggtactgcatttaatcctcacaatacagcgaggtaggtgctactgtaatcccttttatacagatgtgaaaac-taagaatcagagagggtcagtaacttgtccatggtcaccaagctagaaagtgtggggatcagcagttgaatccatcactgcctaactccagaaactggctcttaaccatcataatacactgtccctAGAGTCTGTCCTGCTCCAAACCCTCTGCTTCTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGTTGTTTTCACGCCCCTGTCTCATGACCAAGCAGACCTGCCAGTTTCTTGCAGCTAGCGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 63787 377 - 111706 gtggtgACAGCAGTGGCagcacctgttgtatcgaggcctcactcagttctgagggattcgcagatgttactgcattgaatcctcaccgtacagctaggtcg-tgctactttaatcccttttacacagatgtgaaaac-taagaaccagagagggtcagtaagttgtccgtggtcaccaagctagtaagtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccatcacaatacactgtCCCTAGAGTCTGTCCCGCTCCAAACCCTCTGCCTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGTTGTTTTCACGCCC--GTCTCGTGACCAAGCGGACCTGCCAGTTTCTTG----------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192377338 377 - 192460366 gtggtgACAGCAGTGGCagcacctgttgtatcgaggcctcactcagttctgagggattcgcagatgttactgcattgaatcctcaccgtacagctaggtcg-tgctactttaatcccttttacacagatgtgaaaac-taagaaccagagagggtcagtaagttgtccgtggtcaccaagctagtaagtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccatcacaatacactgtCCCTAGAGTCTGTCCCGCTCCAAACCCTCTGCCTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTCTGTTGTTTTCACGCCC--GTCTCGTGACCAAGCGGACCTGCCAGTTTCTTG----------- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91323124 381 + 91754291 gtggtgACAGCAGTGGCagcacctgttgtatcgaggcctcactcagttctgagggattcgcagatgttactgcattgaatcctcactgtacagctaggtag-tgctactttaatcccttttacacagatgtgaaaacttaagaatcagagagggtcagtaagttgtccgtgatcaccaagctagtaagtgtggggatcagcagttgaatccgtcactgcctaactccagaaactggctcttaaccatcacaatacactgtCCCTAGAGTCTGTCCTGCTCCAAACCCTCTGCTTGTTGAAGGGAAACAAACAGAAATGAGGCCTGAACTC--TTGTTTTCATGCCCCTGTCTCGTGACCAAGCGGACCTGCCAGTTTCTTGCAG-------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73801845 352 + 74750902 GTGCTGGTGGTGGTGGCAGCAGCTGTTGTATTGAGGCCCcactcagttctgagcgattcgcaggtgttactgcatttaatccccacaatactgcaaggtaggtgctactgtaatccc-tctacac-gacgtgaaaac-taagactcagagacggtc------------------------------agtGTGGGGATCAGCAGTTGAATCCATCCCTGTCTAACTCCAGAGACTGGCTCTTAG-CATCACAATACACTGTCCCTACAGACTGTCCCTCTCCAATCCCTCTGTTT----AAGGGAAACAAACAGAAAGGAGGCCTGAACTCTGTTGTTTCCACACCC--ATCTCATGACCAAGCTGACCTGCCACTTCCTTGCAGCTGGTGAT i calJac3.chr17 C 0 C 0 s mm10.chr16 32763362 317 + 98207768 GTGACAGTGGAGGTGGTAGGCCCTTCAATGT--GGTCTCCACTCAGATGTGAGAGATTTACAAATGTCACTGCATTGAAGCCTTA-----------------GACGACGGAAGGCTCTTTCACTCAGATATAAAACCcccaaagtcagaccagatcacc--------------------gttagtaagtgc-agaatcaagggctgaa--agtgactgcctgacccc-gaaacTGACCTGGAAGCACC------------TCCTGTAGTATGTCCT--TAGATAGCATC---------AGAGGAAACAAAGGAAAATCTGGCCTCAACTCTGTGGCTTCCACACCG--GGTGTGT-ACTGAGTGAGCCTGCTGATGTCTCCCTGAT------ i mm10.chr16 C 0 C 0 e canFam3.chr33 2297030 66 - 31377067 I e papAnu2.chr2 187298550 1652 + 187378091 M a score=142455.000000 s hg38.chr3_KI270937v1_alt 27760 46 + 165607 CAGATGTGGAATCGGTTAGAGCCT-CCTACCTCTGCCCAGCCATCTT s panTro4.chr3_GL389630_random 3089 46 - 103936 CAGATGTGGAATCGGTTAGAGCCT-CCTACCTCTGCCCATCCATCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343672 46 - 202140232 CAGATGTGGAATCGGTTAGAGCCT-CCCACCTCTGCCCATCCATCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2798423 46 - 123690457 CAGATGTGGAATCGGTTAGAGCTT-CCTCCCTCTGCCCATCTGTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 64164 46 - 111706 CAGAAGCGGAATTGGTTAGAGCCT-CCTACCTCTGCCCATCCGTCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192377715 46 - 192460366 CAGAAGCGGAATTGGTTAGAGCCT-CCTACCTCTGCCCATCCGTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187300209 46 + 187378091 CAGAAGCGGAATTGGTTAGAGCCT-CCTACCTCTGCCCATCCGTCTT i papAnu2.chr2 M 1652 C 0 s chlSab2.chr15 91323505 43 + 91754291 ---AAGCGGAATTGGTTAGAGCCT-CCTACCTCTGCCCATCTGTCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73802197 46 + 74750902 CAGATGTAGAATCGGTTAGAGCCT-CCCACCTCTGCCCATCCATCTT i calJac3.chr17 C 0 C 0 s mm10.chr16 32763679 45 + 98207768 GAGATGTGGGATAACACAGAACCTCCCCACCCCCACCCATC--TTCT i mm10.chr16 C 0 C 0 e canFam3.chr33 2297030 66 - 31377067 I a score=1971945.000000 s hg38.chr3_KI270937v1_alt 27806 599 + 165607 GTCCCCTCTCCTGCTCAGTG------CTGGGGCTTGA---CGATGGGGGCTGG--------CTGACCCACTGACCCACTGCCCGCCTAGCTGGTTGAC--CAGCTGC-----TGACCG---------GCTAGCGGGA-TGA-ATGGACGCCTTGC-AACCGCGAGGCAAGAGCCTGTGCACGG--CAGAGGCCTGAG--AGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTCAAGCCCTCGCGTGTCC-----------------------------------TCCAGCCCATACACCATCGCAGTCCTAGAGGGCACCTCCCTAACATCACGGCCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCACCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACCAGCCCAAGAGGGCTCTC------GGGGGGCCCAGATCCTGGA--AGTGAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA s panTro4.chr3_GL389630_random 3135 634 - 103936 GTCCCCTCTCCTGCTCAGTG------CTGGGGCTTGA---CGATGGGggctgg--------ctgacccactgacccactgcccgcctagctggttgac--cagctgc-----tgaccg---------gctagcggga-tga-atggACGCCTTGC-AACCGCGAGGCAAGAGCCTGTGCACGG--CAGAGGCCTGAG--AGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGCCTCAAGCCCTCGCGTGTCCCCCAGCCCATACACCATCACAGTCCTCGTGTGTCCTCCAGCCCATACACCATCGCAGTCCTAGAGGGCACCTCCCTAACATCACGGCCATCCTGAAGGGCCTCCCCCACACAGTTCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACCAGCCCAAGGGGGCTCTC------GGGGGGCCCAGATCCTGGA--AGTGAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2343718 617 - 202140232 GTTCCCTCTCCTGCTCAGTG------CTGGGGCTCGA---CGATGGGggctgg--------ctgacccactgacccactgcctgcctagctggttgac--cagctgc-----tgaccg---------gctagAGGGA-TGA-ACAGACGCCTTGC-AACCACGAGGCAAGAGCCTGTGCATGG--CAGAGGCCTGAG--AGTCTCTCCTTT-CTTGCAGTGGAGATGGCTATTTCGAAAACGGCCCACTGATGTCCCAGCCAGTGTGGGAGAGGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCCCAAGCCCTCGCGTGTCC-----------------------------------TCCAGCCCATACACCATCGCAGTCCTAGAGGGCACCTCCCTAACATCACGGCCATTCTGAAGGGCCTCCCCCACACAGTCCAATGTCCTATAGGTCTAGGTGGGATGTGGCATTCGCCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCTGTGCACAGCCCCTCTGAGGGAGGGGGCT-ACATCTCCTCCCTCAGATGA-ACCAGCCCAAGAGGGCTCTC------GGGGAGCCCAGATCCTGGA--AGTAAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2798469 597 - 123690457 GTCCCCTCTCCTGCTCAGTG------CTGGGGCTCAA---CGATGGGGGCTGG--------CTGACCCACTGACCCACTGCCTGCCTAGCTGGTTGAC--CAGCTGC-----TGACCG---------GCTAGCGGGA-TGA-ACGAACACCTTGC-AACTATGAGGCAAGAGCCTGTGCACGG--CAGGGGCCTGAG--CGTCTCTCCTTT-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGCGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAACTCAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTCAAGCCCTCGTGTGTCC-----------------------------------TCCAGCCCATACACCATCGCAGTCCTAGAGGGCACCTCACTAACATCACTGCCATCCTGAAGGGCCTCCCC--CACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGAGCAGCTGGCACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCTAACATCTCCTGCCTCAGATGA-ACCAACCCAAGAGGGCTCTC------GGGGGGCCCAGATCCT-GA--AGTGAGGACCGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 64210 602 - 111706 GTCCCCTCTGCTGCTCAGTG------CTGGGGCTGGA---CAATGGGGGTTGG--------CTGACCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCTGC-----TGACCG---------GCCAGCGGGA-TGA-ATGGACGCCTTGC-AACCGCGAGGCAAGAGCCTGTGCATGA--CGGAGGCCTGAGACAGTCTCTCGTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGCCTCAAGCCCTCGTGTGTCC-----------------------------------TCCAGCCCACACACCACCGCAGTCCTAGAGGGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACCAACCCAAGAGGGCTCTC-----AGGGGGGCCCAGATCCCAGA--AGTGAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192377761 602 - 192460366 GTCCCCTCTGCTGCTCAGTG------CTGGGGCTCGA---CAATGGGGGTTGG--------CTGACCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCTGC-----TGACCG---------GCCAGCGGGA-TGA-ATGGACGCCTTGC-AACCGCGAGGCAAGAGCCTGTGCATGA--CGGAGGCCTGAGAGAGTCTCTGCTTT-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGCCTCAAGCCCTCGTGTGTCC-----------------------------------TCCAGCCCACACACCACCGCAGTCCTAGAGGGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACCAACCCAAGAGGGCTCTC-----AGGGGGGCCCAGATCCCAGA--AGTGAGGACAGGGTC-TTGTGGGAGGTGAGATT-TGAATGGGCAGTTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187300255 610 + 187378091 GTCCCCTCTGCTGCTCAGTG------CTGGGGCTCGA---CAATGGGGGTTGGctgacccactgacccactgacccactgCCCGCCTAGCTGGCTGAC--CAGCTGC-----TGACCG---------GCCAGCGGGA-TGA-ATGGACGCCTTGC-AACCGCGAGGCAAGAGCCTGTGCATGA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGACGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGAGCTGGTCTCAAGCCCTCGTGTGTCC-----------------------------------TCCAGCCCACACACCACCGCAGTCCTAGAGGGCCGCTCCCTAACGTCACCACCGTCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTTCTCCCTCAGATGA-ACCAACCCAAGAGGGCTCTC-----AGGGGGGCCCAGATCCCAGA--AATGAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGgcagttca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91323548 601 + 91754291 GTCCCCTCTGCTGCTCAGTG------CTGGGGCTCGA---CAATGGGGGTTGG--------CTGACCCACTGACCCACTGCCCGCCTAGCTGGCTGAC--CAGCTGC-----TGACTG---------GCCAGCGGGA-TGA-ATGGACGCCTTGC-AACCGCGAGGCAAAAGCCTGTGCATGA--CAGAGGCCTGAGAGAGTCTCTCCTTC-CCTGCAGTGGAGATGGCTATTTCGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCTGATAGATTCCTGAATTCCAGCTCAGGTAAAAGTGCCACCTTATCACCCCTGCGCTGGTCTCAAGCCCTCGTGTGTCC-----------------------------------TCCAGCCCACACACCACCGCAGTCCTAGAGGGCCGCTCCCTAACGTCACCACCATCCTGAAGGGCCTCCCCTGCACAGTCCAACCTCCTACAGGTCTAGGTGGGATGTGGCA-CCGCCCAGGGGGCCGCTGGTACCTCCTGCACCCCTGGACACAGCACCGTCT-----------------CAGA-GGGGCT-ACGTCTTCTCCCTCAGATGA-ACCAACCCAAGAGGGCTCTC-----AGGGGGGCCCAGATCGCAGA--AGTGAGGACAGGGTC-TTGTGGGAGGTGGGATT-TGAATGGGCAGTTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73802243 601 + 74750902 GTCCCCTCTCCTGCTCAGTG------CTGGGACTCAA---CAATGGGGGTCGG--------ATGACCAGCTGACCCACTGACTGCCTAGCTGGTTGGC--CAGCTGC-----TGACCA---------GCTAGCCGGAGTGA-ATGGTTGCCTTGC-AACCAGGAGGCAAGGGCCTGTTCCTGG--CAGAGGCCTGAG--CATCTTTCCTTTGCCTGCAGCGGAGATGGCTATTTTGAAAACAGCCCACTGATGTCCCAGCCAGTGTGGGAGAAGTATCGCCCCGACAGGCTCCTGAATTCCAACTTAGGTAAAAGTGCCACCTTATCACACCTGAGCTGGTCTCAAGCCCTGGTTTGTCC-----------------------------------TCCAGCCCATATGCCATCACAGTCCTAGAGGGCAGCTCCCGGGCATCACCACCATCTTGAAGGGTGTCCCCCACACAGTCCAACCTCCTACAGGTCTAAGTGGGACATGGCA-CTGCCCAGGGAGCAGCTGGCATCTTCTGCACCCCTGGACACAGCACAGTCT-----------------CAGAGGGGGCT-ACATCTCCTCCCTCGGATGT-ACCAACCCAAGAGGGCTCTC------GGGGGGTCCAGCTCCTGGA--AGTGAAGACAGGGCC-TTGTGGGAGGTGGGATG-TAAATGGGTAGAATG i calJac3.chr17 C 0 I 240 s mm10.chr16 32763724 576 + 98207768 CTTCCTTCTCCCCCTTGGGA------CTGGCACTGTGATTCAATCTGAGCTGC--------TCAGCTGACTGAGCCATGGGCTACC-AGCT-GCTGAC--CGGGAGCTGGGATGACTG---------ACAAACTCAA-CGA-ATGAGTAGCTTTCAAAATGAGAGCGAAGAGCTTGAGTGTGACCCAGAGGCCTGAG----TCTTTCCTTTGCCTGCAGTGGAGATGGGTATTTTGAAAACAGCCCGCTGACATTCCGGCCAGCAATGGAGAAGTACCGTCCAGATCGATTCCTGAATTCCAAATTAGGTAAAAGTGCCACC-CACCACATACGAGCTGGCTTCAGG-CTTCCCTTGCCC-----------------------------------TCTATACCATATGCCATGACAGTCCTAGACAGATG-----TAACCTCTCCATCACCCCGAAGAGCAT--CCTGCACAAACCAGCCACCTACAGGT------------------GCATCCA-----CAGTTAATCCTGCCTGGACCTTTTCATAC-TCTCAGCCC-----------------CTA-------T-AAATCTTATTCTGTAGAAGAGACAAACCCAGAATGTCTGTCTATCTGTAGGCACCCTGGTCCTGGAGTGGGGATGACAAGGTCACTGCAGGAAGGGAGATA-GGTGTGG--AGTTAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2297096 584 - 31377067 gtcccctctttcccccaatgtggaaactgaggcggga---agaggtgaagcag--------gtggctca-gggCTCCCTGCTCCCAGGGCGGCCCGCCGACGGGTGC-----AGGCCGCCACCTGCCGCCGCTGGGG-TGGCACAGGCGCTGGGC-CCCGACGGCGGGACCGCC--------G--CGACAGCCT-----GGCTTCTCCCCCGCCCGCAGCGGAGACGGGCTCTGCGGCCACAGCGCGCTGTCCTCTGGGCCCACGTGGAAGAGGTACCAGCCCGACCGGCTCCTGAACACCCACACAGGTAACAGCGCCCCG----CACACCTG-GCTGGACCCTAAATGCCCTCTGTCC-----------------------------------TCCG--CCATGCGGCGCGGGGGTCCTCGAGCCGCGGCTCCCGGCGTCTCCTCCATCCCACGGGG--GTCCCCGGACAGGGCGGCTCCACTATGATC-----AGGACCTGCCC-CCCCGCCCGGGACACCAGG-ACCTTCTGGGCCCTCGGGTGGGGCA---TCT-----------------TGGGCGGGGCG-AGGTCTCCGCC-----GGGG-ACCAGCCGAACCCAGCTCTC------GGGGAGGCCGGGTCCTGGA--GGTGACAACAGGGCC-GCGCAGGAGGTGGGGCTATGCGTGGGCAGTTAG i canFam3.chr33 I 66 C 0 a score=235966.000000 s hg38.chr3_KI270937v1_alt 28405 68 + 165607 GACAATAC-T-CCAAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA s panTro4.chr3_GL389630_random 3769 68 - 103936 GACAATAC-T-CCAAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2344335 68 - 202140232 GACAATAC-T-CCAAGTGTCCTG-TCCAGAGCAGGAATGAGAACCTAGGTGAGATCCTTTAAGAAAATCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799066 68 - 123690457 GACAATAC-T-CCAAGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 64812 68 - 111706 GACAATTC-T-CCAAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192378363 68 - 192460366 GACAATTC-T-CCAAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATCTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187300865 68 + 187378091 gacaattc-t-ccaaGTGTCCTG-TCCAGAGCAGGAATGAGAACCCAGGTGAGATCCTTTAAGAAAATcta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324149 68 + 91754291 GACAATTC-T-CCAAGTGTCCTG-CCCAGAGCAGGAATGAGAACCCAGGTGAGCTCCTTTAAGAAAATCTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803084 69 + 74750902 GACAGTAC-TCCCAAGTGTCCTG-TCCAGAGCTGGAATGAGAACCCAGGGGAGATCCCTTAAGAAAATCTA i calJac3.chr17 I 240 C 0 s mm10.chr16 32764300 57 + 98207768 GATAACACAT-ATAAATACCCAATTCCAGAGCTGGAGTAAGATCC-------------TTAAAGATATCTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2297680 65 - 31377067 GCCGCTAC-T-CCAGGTGGCC-G-AGCGGAGCTGGA--GGGCGTCCGGGTGAGATCCCAGAAGGGACCCTA i canFam3.chr33 C 0 C 0 a score=498395.000000 s hg38.chr3_KI270937v1_alt 28473 188 + 165607 CCggct-gggcgccatggctcacacctgtaatcccagcattttgggaggctgaggtgggcggatcacttgagatcaggagttcgagaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacgttgtggtgcacacctgtaattccagctactcaataggttgag s panTro4.chr3_GL389630_random 3837 188 - 103936 CCAgct-gggcgccatggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaattctgtctctactaaaaatacaaaaattagccagacgttgtggcgcacacctgtaattccagctactcaagaggctgag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2344403 188 - 202140232 CCggct-gggcgccgtggctcacacctgtaatctcagcactttgggaggctgaggtgggcggatcacttgaggtcaggagttcgagaccagcctggccaacatcgtgaaacctcgtctctattaaaaatacaaaaattagccgggcattgtggcgcacacctgtaactccagctactcaagaggctgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799134 188 - 123690457 CTggct-gggcgccgtggctcacacctgtaatcccagcactttgggaggctgaggtgggcagatcacttgaggtcaggagttcgagaccagcctggccagcatggtgaaattctgtctctagtaaaaatacaaaaattagctgggcgttgtggcgcacacctgtaattccagctactcaagaggctgag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 64880 189 - 111706 CCggccggggtgcggtggctcacgcctgtgatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccagtcattgtagcgcacacctgtaattccagctactcgagaggctgag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192378431 189 - 192460366 CCggccggggtgtggtggctcacgcctgtgatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagctactcgagaggctgag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187300933 188 + 187378091 ccggcc-gggcgcagtggctcacgcctgtgatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccaggcattgtagcgcacacctgtaattccagttactcgagaggctgag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324217 188 + 91754291 CCggcc-gggcgcagtggctcacgcctgtgatcccagcactttgggaggctgaggtgggcggatcacttgaggtcaggagtttgagacccgcctgggcaacatggtgaaactctgtctctactaaatacacaaaaattagccgggcatcgtagcgcacacctgtaattccagctactcgagacgctgag i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803153 179 + 74750902 CT-GTT-gggcaagatggttcatgcctgtaatcccggcactttgggaggtcgaggt-ggcagatcacttgaggtcaggagttcgagaccagcctgggcaacagggtgaaac-------ctgctaaaaacacacaaattagccaggcgttgtggtgcacacctgtaatcccagctactcagcaggctgag i calJac3.chr17 C 0 C 0 s canFam3.chr33 2297745 98 - 31377067 ---------------------------------CCAACA-----GGAGGTC-----------------------CAGGAGCCTGA----CGTGCAGTCATCGTCACGGAAGCACGTCTCCACC--------------------TGCTGCGTGCTGCACG-CTGTGCTGAGAGC----CAGGAGTAGGA- i canFam3.chr33 C 0 C 0 e mm10.chr16 32764357 0 + 98207768 C a score=209609.000000 s hg38.chr3_KI270937v1_alt 28661 76 + 165607 gcaggagaattgtttgaacctgggaggtggaggttgcagcgagccgagatcgcgccactgcactccagcctgggtg s panTro4.chr3_GL389630_random 4025 76 - 103936 gcaggagaattgtttgaacctgggaggtggagtttgcagcgagccgagatcgcgccactgctctccagcctgggtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2344591 76 - 202140232 gcaggagaattgtttgaacctgggaggtggaggttgcagcgagccgagatcgcaccactgcactccagcctgggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799322 76 - 123690457 gcaggagaattgtttgaacctgggaggtggaggttgcagcgagccgagatcacgccactgcactccagcctgggtg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65069 76 - 111706 gcagcagaatcgtttgaacccgggaggtggaggttgcagcgagccgagatcgctccactgcactcccgcctgggtg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192378620 76 - 192460366 gcaggagaatcgtttgaacccgggaggtggaggttgcagcgagccgagatcgctccactgcactcccgcctgggtg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187301121 76 + 187378091 gcaggagaatcgtttgaacccgggaggtggaggttgcagcaagccaagatcgctccactgcactcccacctgggtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324405 76 + 91754291 gaaggagaatcgtttgaacccggaaggtggaggttgcagcgagccgagatcactccactgcactcccgcctgggtg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803332 75 + 74750902 gcaggacaatcttttgaacctgggaga-ggaggttgcagtgagccgagatcacattactgcactccagcctggatg i calJac3.chr17 C 0 C 0 s mm10.chr16 32764357 15 + 98207768 GCAGGAGA-----------------------------------------------CATTGCA-------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2297843 62 - 31377067 AGGGGAGGAATGggggcgcccgggggg-------ctcagtg-gctgagcgc------ctgccttccacccagggcg i canFam3.chr33 C 0 I 187 a score=292289.000000 s hg38.chr3_KI270937v1_alt 28737 113 + 165607 acagagtgagactccatctcaaaaagagagaaTCCACCAAGAAGAGGCCCGGGGGTCTCAcgttcatt--gtcatcatttactgggcacctgccgtgtgctggacaccgtgctaa s panTro4.chr3_GL389630_random 4101 113 - 103936 acagagtgagactccatctcaaaaagagagaaTCTACCAAGAAGAGGCCCGGAGGTCTCAcgttcatt--gtcatcatttactgggcacctgccgtgtgctggacaccgtgctaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2344667 113 - 202140232 acagagcaagactccatctcaaaaagagagaaTCTACCAAGAAGAGGCCCGGAAGTCTCAcgttcatt--gtcatcatttactgggcacctgccgtgtgctggacactgtgctaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799398 111 - 123690457 acagagtgagactccgtctcagaaagagagaaTCTACCAGGAAGAGGCCCGGAGGTCTCAcattcatt--gtcatcaattattgggcacctgccgtgtgctggacac--tgctaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65145 104 - 111706 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCC---------GAcattcatc--atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192378696 104 - 192460366 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAGAGGCC---------GAcattcatc--atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187301197 104 + 187378091 acagagcgagactccatttcagaaagaGAGAATCTACGAAGGAGAGGCC---------Gacattcatc--atcatcatttactgggcacctgctgtgtgctggaCACTGTGCTAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324481 104 + 91754291 acagagcgagactccatctcagaaagagagaaTCTACGAAGGAAAGGCC---------GAcattcatc--atcatcatttactgggcacctgctgtgtgctggacactgtgctaa i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803407 109 + 74750902 acagagcaggactctatctcaaaaagagagaaTCTACCAAGA----GTCCAGAGGTCTGAcattcatt--atcatcattgattgagcacctgccgtgtggtagacactatgctaa i calJac3.chr17 C 0 C 0 s mm10.chr16 32764372 64 + 98207768 ------------------------------------------AAGGGCT---------GGcatttactcggtcaacatttattgagcatttactatctgccagatggtaggttaa i mm10.chr16 C 0 C 0 e canFam3.chr33 2297905 187 - 31377067 I a score=886726.000000 s hg38.chr3_KI270937v1_alt 28850 271 + 165607 cagccagaaa----------caaaggaaaaagaccaactgtgttttctctcaaagagctttcatgcgggtagaaagacaagcgtcaagaggcaaacaatGGCG-CCTTCTCCATGACTC-----A-------GTCC-------AGAGGCcccaatgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCGTCAGAAGCAGACGCTAAGTCAA s panTro4.chr3_GL389630_random 4214 271 - 103936 cagccagaaa----------caaaggaaaaagaccaactgtgttttctctcaaagagctttcatgcgggtagaaagacaagcgtcaagaggcaaacaatGGCG-CCTTCTCCATGACTC-----A-------GTCC-------AGAGGCcccaatgggaaagaaataatagtttccaaaatgtg-ataggttgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACGTTTGGTCGTCAGAAGCAGACGCTAAGTCAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2344780 278 - 202140232 cggccggaaacatttt----caaaggaaaaagaccaactgtgttttcgctcaaagagctttcatgtgggtagaaagacaaacgtcaagaggcaaacgatggtgcccTTCTCCATGACTC-----A-------GTCC-------AGAGGCcccaatgggaaagaaataacaatttccaaaatgtg-ataggacgaaggacattttaggctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCACATTTGGTCATCAGAAGCAGACGCTAAGTCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799509 277 - 123690457 tggccagaaacatttt----caaaggaaaaagaccaactgtgttttctctcaaagagctttcacgtgggtagaaagacaagcgtcaagaggcaaatgaTGGTG-CCTTCTCCATGACTC-----A-------GGCC-------AGAGGCcccaatgggaaagaaataatagtttccaaaatgtg-ataggacgaaggacattttagcctt----agaaaccagccacgtgaactgtgaagtgtaaatccagttctatttgttctgtggcaACCATGTTTGGTCATCAGAAGCAGACGCTAAGTCAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65249 274 - 111706 cagccagaaacatttt---aaaacggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagacaagtgtcaagaggcaGACGATGGCG-CCTTCTCC--GACTC-----A-------GTCC-------AGAGGCcccaatgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccatgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192378800 274 - 192460366 cagccagaaacatttt---aaaaaggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagacaagtgtcaagaggcagacgatgaCG-CCTTCTCC--GACTC-----A-------GTCC-------AGAGGCcccagtgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccatgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187301301 274 + 187378091 CAgccagaaacatttt---aaaacgGAAAAAGATCAACTATGTTTACTCTCAAAGAGCTTTCATGTGGGTAGAAAGACAAGTGTCAAGAGGCAGACGATGGCA-CCTTCTCC--GACTC-----A-------GTCC-------AGAGGCCCCAATGGGAAAGAAACAATAGTTTCCAAAATGTG-ATAGGATAAAGGACAGTTTAGCCTT----AGAAACCAGCCACGTGAATTGTGAAGTATAAATCCAGTTCTATTTGTTCTGTGGCAACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324585 274 + 91754291 cagccagaaacatttt---aaaatggaaaaagatcaactatgtttactctcaaagagctttcatgtgggtagaaagacaagtgtcaagaggcaGACGATGGCG-CCTTCTCC--GACTC-----A-------GTCC-------AGAGGCcccaatgggaaagaaacaatagtttccaaaatgtg-ataggataaaggacagtttagcctt----agaacccagccacgtgaattgtgaagtataaatccagttctatttgttctgtggcaACCACTTTTGGTAA--AGAAACAGACGCTAAGTCAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803516 266 + 74750902 cagccagaaacatttt---taaaaggaaaaagaccaactatgtttgctctcaaagagctttcatgcaggtaa-------------aaggggcaaacGATGGCA-CCTGCTCCATGACTCTGTCAC-------GTCC-------AGCGGCCGCAATGGGAAAGAAAT--CAGTTTCCAAAATGTG-ATAGGACAAAGGACATTTTCACCCT----GGCAG-CAGCCCCGTGAGTTGCGAAGTGTAAATCCACTTCTATTTGTTCTCTGGCAACCACGTCTGGTAATCAGAAACAGGTGCTAAATC-A i calJac3.chr17 C 0 C 0 s mm10.chr16 32764436 290 + 98207768 ctgacagaaaaatggaGAGAAAGAGGATGAAGGCCAGCTATGTTGGCTCTCAACAAGCATTCACTATGGTGGAGACCCTAGTGTCCAGAGGCAAACTGTGGGG-CTTCCTCTGAGACTC-----A-------GTCTAATATAGAGAGGTTCCAACAGGAAAGAAATGTCAGCTTCCAAAATGTG-ATGGAGAAAAGGGCATGCTAGCCTTCGGAAGAGGTCAGTCAGGCAGATG--CAAGTGTGAGTCCAGGTCTAGTTGATCTGGGACAAAGAAGTTTGGCAATCAGGCACGTAAGTTGGGTCAG i mm10.chr16 C 0 I 779 s canFam3.chr33 2298092 260 - 31377067 --aaaagaaaaA--------CAAAAGGAGCAGACTGCCTACGTTTGCTCTCAAATAGCTGTTAGGAATGCCGGTGCTTCAGTATCAGGAGGCC-----------CCATGGACGTGACTC-----AATCTATTGTCC-------GGAAGCCCCAAGAGGAAAGAAATTACAGTTCCCCAAATGTGCATAGAACGAAGGACGGTTTAGCGTT----Agacatcagccacgcagatggtgaaacataaac---gtgctatttgttctgcgacaaacacttctg------cgaaacagcagctaagtcaa i canFam3.chr33 I 187 C 0 a score=24769.000000 s hg38.chr3_KI270937v1_alt 29121 8 + 165607 GCGAGGGG s panTro4.chr3_GL389630_random 4485 8 - 103936 GCGAGGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345058 8 - 202140232 GCGAGGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799786 8 - 123690457 GCGAGGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65523 8 - 111706 GTAATGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192379074 8 - 192460366 GCAATGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187301575 8 + 187378091 GCAATGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324859 8 + 91754291 GCAATGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803782 8 + 74750902 GTGATGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32765505 8 + 98207768 GCAAGGTG i mm10.chr16 I 779 C 0 s canFam3.chr33 2298352 8 - 31377067 atcatggg i canFam3.chr33 C 0 I 864 a score=104898.000000 s hg38.chr3_KI270937v1_alt 29129 34 + 165607 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG s panTro4.chr3_GL389630_random 4493 34 - 103936 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345066 34 - 202140232 CTTTGGGGGAGGAATTGTTGCCCATCTGACTTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799794 34 - 123690457 CTTTGGGGGAGGAATTATTGCCCATCTGACTTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65531 34 - 111706 CTTTGGGGGAGGAATCCTTGCCCACCTGACGTGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192379082 34 - 192460366 CTTTGGGGGAGGAATCCTTGCCCACCTGACGTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187301583 34 + 187378091 CTTTGGGGGTGGAATCCTTGCCCACCTGACGTGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91324867 34 + 91754291 CTTCGGGGGAGGAATCCTTGCCCACCTGACGTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73803790 34 + 74750902 CACTGGGGGAGGAATCGTTGCCCGTCTGAATTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32765513 33 + 98207768 GTTT-GGAGAGAAATCACTGCCATTCTGAAGTGG i mm10.chr16 C 0 C 0 e canFam3.chr33 2298360 864 - 31377067 I a score=16833.000000 s hg38.chr3_KI270937v1_alt 29163 4 + 165607 GTCC s panTro4.chr3_GL389630_random 4527 4 - 103936 GTCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345100 4 - 202140232 GTCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799828 4 - 123690457 GTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65565 4 - 111706 GCCC i rheMac3.chrUn_JH291127 C 0 I 34 s macFas5.chr2 192379116 4 - 192460366 GCCC i macFas5.chr2 C 0 I 20 s papAnu2.chr2 187301617 4 + 187378091 GCCC i papAnu2.chr2 C 0 I 27 s chlSab2.chr15 91324901 4 + 91754291 GCCC i chlSab2.chr15 C 0 I 34 s calJac3.chr17 73803824 4 + 74750902 GTCC i calJac3.chr17 C 0 I 18 s mm10.chr16 32765546 4 + 98207768 ATCC i mm10.chr16 C 0 I 20 s canFam3.chr33 2299224 4 - 31377067 GTCC i canFam3.chr33 I 864 C 0 a score=48342.000000 s hg38.chr3_KI270937v1_alt 29167 47 + 165607 AAAGAGGTGAGAAGTGGCAGGAGGGGGTGCATTTGTGAGTTTTGGTT-- s panTro4.chr3_GL389630_random 4531 47 - 103936 AAAGAGGTGAGAAGTGGCAGGAGGGGGTGCATTTGTGAGTTTTGGTT-- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345104 47 - 202140232 AGAGAGGTGAGAAGTGGCATGAGGGGGTGCATTTGTGAGTTTTGGTT-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799832 47 - 123690457 AAAGAGGTGAGAAGCGGCATAAGGGGGTGCATTTGTGAGTTTTGGTT-- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73803846 45 + 74750902 AAAGAGGTGAGAAGTGGCAC--GGGGGTGCATTTGTGAGTTTTCGTT-- i calJac3.chr17 I 18 C 0 s mm10.chr16 32765570 45 + 98207768 AGAGAGGCAGGACATGGATG--GAGGATGCAGCCAGGAGTTTGCGTT-- i mm10.chr16 I 20 C 0 s canFam3.chr33 2299228 46 - 31377067 CGAGAGGC-AGAGGCGGTAGCAGAAGGTGCATCTGTGAGTC--GGTCTC i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91324905 34 + 91754291 I e papAnu2.chr2 187301621 27 + 187378091 I e macFas5.chr2 192379120 20 - 192460366 I e rheMac3.chrUn_JH291127 65569 34 - 111706 I a score=26786.000000 s hg38.chr3_KI270937v1_alt 29214 26 + 165607 GACCCTAAAGCTGAGACAGGGCCTGC s panTro4.chr3_GL389630_random 4578 26 - 103936 GACCCTAAAGCTGAGACAGGGCCTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345151 26 - 202140232 GACCCTAAAGCTAAGACAGGGCCTGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799879 26 - 123690457 GACCCTAAAGCTAGGACAGGGCCTGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192379140 7 - 192460366 GACCCCA------------------- i macFas5.chr2 I 20 C 0 s calJac3.chr17 73803891 26 + 74750902 GACCCTAAAGCTAAGACAGGGCCTCC i calJac3.chr17 C 0 C 0 s mm10.chr16 32765615 26 + 98207768 GAGTCTGAAGCTGGAACTGAGCTTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2299274 21 - 31377067 GGTC-----GCTAATGCAGAGCGTGC i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91324905 34 + 91754291 I e papAnu2.chr2 187301621 27 + 187378091 I e rheMac3.chrUn_JH291127 65569 34 - 111706 I a score=12574.000000 s hg38.chr3_KI270937v1_alt 29240 7 + 165607 AGCCCCA s panTro4.chr3_GL389630_random 4604 7 - 103936 AGCCCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2345177 7 - 202140232 AGCCCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799905 7 - 123690457 AGCCCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192379147 6 - 192460366 -GGCCCA i macFas5.chr2 C 0 I 1 s papAnu2.chr2 187301648 6 + 187378091 -ggccca i papAnu2.chr2 I 27 I 1 s calJac3.chr17 73803917 7 + 74750902 AGCCCCA i calJac3.chr17 C 0 I 1 s mm10.chr16 32765641 7 + 98207768 AGCCTGT i mm10.chr16 C 0 C 0 s canFam3.chr33 2299295 7 - 31377067 GGCCCTG i canFam3.chr33 C 0 I 2 e chlSab2.chr15 91324905 34 + 91754291 I e rheMac3.chrUn_JH291127 65569 34 - 111706 I a score=2448661.000000 s hg38.chr3_KI270937v1_alt 29247 644 + 165607 GCCCT-GG-ATAAGC-CCTTTCCCC---CCCAT-CCCCGACCTCAGGCCTCCAAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC--------------------CCCCCACAAGCCCACCCACCACCCTCTCTGCTCACGCC--CTCAGC---------------------------------------------------------------------------------CTCTCCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCACCCCGCCCCTGGCAGCCCCAG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGTAGGCAGCTGTGCAGCTTCACCTCTTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCTTGGCAGTTGGGTGCGT--GAGTCCGT---GATCTCA-ACCCCAC--------CTTCCC---------------------------------------------GGCCAAGT-AG-GGGACCCTCAGCATGAAGCCTCTCGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatcgggtaac-gttaggaagcttccaacatccccac s panTro4.chr3_GL389630_random 4611 643 - 103936 GCCCT-GG-ATAAGC-CCTTTCCCC---CCCAT-CCCCGACCTCAGGCCTCCAAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC--------------------CCCCCACAAGCCCACCCACCA-CCTCTCTGCTCATGCC--CTCAGC---------------------------------------------------------------------------------CTCTCCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCACCCCGCCCCTGGCAGCCCCAG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCGCTGGGGCCTTGGCAGCAGGCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCTTGGCAGTTGGGTGCGT--GAGTCCGT---GATCTCA-ATCCCAC--------CTTCCC---------------------------------------------AGCCAAGT-AG-GGGACCCTCAGCATGAAGCCTCTTGTCCTCATT-CCTTCCCAGACCCTTCCCCTCTCTGGGCCTCCACTTCCTGATCGGGTAAC-GTTAGGAAGCTTCCAACATCCCCAC i panTro4.chr3_GL389630_random C 0 I 2340 s ponAbe2.chr3 2345184 650 - 202140232 GCCCTGGG-ATAAGC-CCTTTCCCC---CGCATCCCCCAACCTCAGGCCTCCGAGGACTGCAGTTCTACAGGCTACACCAGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGCAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGACGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC--------------------CCCGCACAAGCCGACCCACCACCCTCTCTGCTCACGCC--CTCAGC---------------------------------------------------------------------------------CTCTCCCC----AGAAACAG-CCCC-------------------------------------------------TGCTGGTTCCCGCTCCGTCCCTGGCAGCCCTGG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCGCTGGGGCCTCGGCAGCGGGCAGCTGTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCCGCGTCCTTGGCAGTTGGGTGCGT--GAGTCTGTGGAGATCTCA-ACCCCAC--------CCTCCC---------------------------------------------AGCCAAGC-AG-GGGACCCTCAGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatctggtaactgttaggaagcttccaacatccccac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2799912 649 - 123690457 GCCCT-GG-ATAAGC-CCTTCCCCCCT-CCCAT-CCCCGACCTCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCTGGAAGAAAGGCCCAACTACTGTCTTGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCGGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCTCCTTCCCGC--------------------CCCCCACAAGCCCACCCACCACCCTCTCTGCTCATGCC--CTCAGC---------------------------------------------------------------------------------CTCTCCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCGCCCCGCTCCTGGCAGCCCCGG---CCTGGGCCTGAGTGGGACTGGGCTTGTTTCAGGACGCCGGAGCCTCGGCAGCAGGCAGCTGTGCAGCTTCACATCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCTTGGCAGTTGGGTGCGT--GAGTGCGTGGAGATCTCA-ACCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-AGGACCCTCAGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccacttcctgatctggtaac-attaggaagcttccaacatccccac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 65603 732 - 111706 GCCCT-GG-ATAAGC-CCTTTCTCTCTCCCCATCTCCTGACCCCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCtcagtggcccagctggggctggaaccaggtctcctgCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACAccaccttcccgc--------------------cccccacaagctcacccaccaccctctctgctcgcgcc--ctcagcctcccgccctctctgctcgcgccctcagcctcccgccctctctgctcgcgccctcagcctcccgccctctctgctcgcgcgctcTTCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCGCCCCGCCCCTGGCATCCCCGG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAGGCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCCTGGCAGTTCGGTGCGT--GAGTCCATGGAGATCTCA-ACCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-GGGACCCTCAGCGTGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccatttcctgatctggtaac-attaggaagcttccaacatccccac i rheMac3.chrUn_JH291127 I 34 C 0 s macFas5.chr2 192379154 674 - 192460366 GCCCT-GG-ATAAGC-CCTTTCTCTCTCCCCATCTCCTGACCCCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC--------------------CCCCCACAAGCTCACCCACCACCCTCTCTGCTCGCGCC--CTCAGCCTCCCGCCCTCTCTGCTCGCGCC----------------------------------------------------------CTCTTCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCGCCCCGCCCCTGGCATCCCCGG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAGGCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCCTGGCAGTTCGGTGCGT--GAGTCCATGGAGATCTCA-ACCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-GGGACCCTCAGCGTGAAGCCTCTTGTCCTCATT-CCTTCCCAGACCcttcccctctctgggcctccatttcctgatctggtaac-attaggaagctTCCAACATCCCCAC i macFas5.chr2 I 1 C 0 s papAnu2.chr2 187301655 673 + 187378091 gccct-gg-ataagc-cctttctctctccccatctcctgACCCCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCCAACTACCGTCTCGAGTGCCTGCAGTGGCTGAAGAGCCAGCCTCAGTGGCCCAGCTGGGGCTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCCGTCAGCATAGGT--GACACCACCTTCCCGC--------------------CCCCCACAAGCTCACCCACCACTCTCTCTGCTCGCGCC--CTCAGCCTCCCGCCCTCTCTGCTCGCGCC----------------------------------------------------------CTCTTCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCGCCCTGCCCCTGGCATCCCCGG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCTCTTGGGCCTAGGCAGCAGGCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGGCACGTGCAGCGTCCCTGGCAGTTCGGTGCGT--GAGTCCATGGAGATCTCA-ACCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-GGGACCCTCAGCATGAAGCCTCTTGTCCTCATT-CCTTCCC-gacccttcccctctctgggcctccatttcctgATCTGGTAAC-ATTAGGAAGCTTCCAACATCCCCAC i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 91324939 645 + 91754291 GCCCT-GG-ATAAGC-CCTTTCTCTCTTCCCATCTCCTGACCCCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACCGGGAAGAAAGGCCTAACTACCGTCTCGAGTGCCTGCAGTggttgaagagccagcctcagtggcccagctggggctggaaccaggtctcctgCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCAACCTGTCAGCATAGGT--GACACCACCTTCCCGC--------------------CCCCCACAAGCTCACCCA-------------------------------CCGCCCTCTCTGCTCGCGCC----------------------------------------------------------CTCTTCCC----AGAAACAG-CCCC-------------------------------------------------TGCTTGTTCCCGCCCTGCCCCTGGCATCCCCGG---CCTGGGCCTGAGTGGGACTGGACTTGTTTCAGGTCTCTTGGGCCTCGGCAGCAGGCAGCTCTGCAGCTTCACGTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCGTGGGGAGAGTTTCGTGAAGGCTGGCATGTGCAGCATCCCTGGCAGTTCGGTGCGT--GAGTCCATGGAGATCTCA-ACCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-GGGACCCCCAGCATGAAGCCTCTTGTCCTCATT-CCTTCCCagacccttcccctctctgggcctccatttcctgatctggtaac-attaggaagctTCCAACATCCCCAC i chlSab2.chr15 I 34 C 0 s calJac3.chr17 73803925 644 + 74750902 GCCCTGGG-ATAAGC-CCTTTTTTCCTCCCCATCCCCCAACCCCAGGCCTCCGAGGGCTGCAGTTCTACAGGCTACACAGGGAAGAAAGGCCCAACTACCGTCTCATGTGCCTGCAGTGGCTGAGGAGCCAGCCTCAGTGGCCCAGCTGGGGTTGGAACCAGGTCTCCTGCCCTTGTTCCTGGCAGCAGGGACGATGGGACTTACGATTCCGACCCGTCAGCATAGGT--GACACTTCCTTCCTGT--------------------CCCCCACAAGCCCACCCACCATCCTCTCTGCTCATGCC--CTCAGC---------------------------------------------------------------------------------CTCTTCCC----AGAAACAACCCCC-------------------------------------------------TGCTTGTTCCCGGCCCACCCCTGGCAGCCCCAG---CCTGGGCCTGAGCACGACTGGACTTGTTTCAGGTCGGTGGGCCCCCGGCAGCAGGCAGCTCTGCAGCTTCACCTCCTGGCGAGGAGGCGTGTGCTGCAGCTACGGGCCCTGGGGAGAGCTTCGTGAAGGCTGGCACGTGCAGAGTCCTCGGCAGTTTGGTG-GT--GAGTCC-------TCTCA-GCCCCAC--------CTTCCC---------------------------------------------AGCCAAGC-AG-GGGATCCTCAGGATGAAGCCTCT-GTCCTCATTCCCTTCCCagacccttcccc-atctgggcctccatttcctgatcttgtaaa-gttaggaagcttccaacatcctcac i calJac3.chr17 I 1 C 0 s mm10.chr16 32765648 713 + 98207768 GTTCT-GACATAAGC-ACTGCTTTC---CTTGT------TCCTCAGGCATCCGGGGACTGCAGGTCTACAGGCTGCACAGGGAGGAGCGGCCCAACTACCGGCTCAAATGTCTGCAGTGGCTGGAGAGTCAGCCTCAGCAGCCCAGCTGGGGCTGGAGCTCAGTTTCCTGCCCTTGCTCCTGGCAGCAGGGACAACGGGACTTTCGGTTCAGGCCCATCAACCCAGGT--GATACTTCCTTCCTGC--------------------CCTTGACAAGCCCACCGGCCATCACCTCTGCTCACACCTGTCCTGCCCTCTCCCAGACACGCTGAGCCC----------------------------------------------------------CTCCCCCCACAGAGAGACAG-CACcacacacacacacacacacacacacacacacacacacacacacacaaacacaGCCCCTCCCGCCTCACCTGTCACAAGCT------CCTGGACCTGAGGATGTCTGGTCTCTTTGCAGGTTGGTGGGAC---------AGGCAGCTGTGCAGCTTCTCCTCCGGGCGAGGGGGTGTGTGCTGCAGCTATGGTGCCTGGGGAGAGTTTCGAGAAGGCTGGAGAATGCACAGTCCTTGGCAGTTTGGTAAGT--ATCTTCCTGGAGACCTTA-ACCCCGCCCGCGGCTCTTCTC---------------------------------------------AGACAGGCTAT-GGGACCTTCCGGATGAAGCCTCTTGATCCCAAT-GCTTCCCAGATGCTTTCTCTCT---GGTCCCAGTCCCCTGATCTTGAAAA-GTTCAGAACCTGCCATCTTCCTT-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2299304 737 - 31377067 GCCCT-GG-AGCAGCATCCCTCCCT---CCTCTGTTCCG---CTAGGCCTCCGGGGCCTGCAGCTCTACAGCCTGCACCAGGAAGAAAGGCCCAACTACCGTCTCAGGTGCCTGCAGTGGTTGAAGACACAGCCTCAGTGGCCCACGTGGGGCTGGAACCAGGTCTCCTGCCCTTGCTCCTGGCAGCAGGGACTGTGGGACTTGCGGTTCCAGCCTAGCAGCATAGGTAAGAGAGCTCCTCCCTGCCTCTTGGGGCATGCCCACCGCCCCCGTAAGCCCACCCACCAACC-CTCCGGTCACGCCTGACCTGTCCCTTCCAGGGCACCCTCGGCCC----------------------------------------------------------CTC-CCCC----AGGGTCCC-CCCC-------------------------------------------------AGC---CTCCCGTCCCTCCCC---CGCTCCCGGGCCTCTGGGCCTGAGCGTGTCTGTACCCGTTGCAGGCTGGTGGGGCCTCGGCAGCAGGCAGCTGTGCAGCTTCTCCTCCTGGCGCGGGGGCGTGTGCTGCAGCTACGGGCCCTGGGGCGAGCTTCTCCAAGGCTGGAGGGTGCACGATCCTTGGCAGTTTGGTACGTGCGTGTTCACGGACATCTCACCCCCCAC--------CTTCTCTGGAGTCTCTACCCTTCTCTGTCAGAGACCAGGCCTGGGCCTCCGAGCCAAGT-AGTGGGATCTGAAGAAAGAAGCCTTTCGCCCCCCTT-CCCTCCCAGCCCCTTACCCTCTCTGGCCACTGATTTCCTCATGTTGTAAC-ACTGGGAAGCTTCCAGCAGCCCTTC i canFam3.chr33 I 2 C 0 a score=654346.000000 s hg38.chr3_KI270937v1_alt 29891 233 + 165607 cagcggacattc-ggggatgtatgaGCTGAGAGCCTCTTTCCTCATCTCTATACCTGGCTCCACATCCCCAGGCCAGAGTGGGGCCATTTCTCCAGGCAAGAAGAGAGCGCCTAGGCTGACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACGCTCCAAGGGAGCTGGAGAGCGCAGGGGTGT--GGGGTCA-------------------------C-GTGGTCT s ponAbe2.chr3 2345834 233 - 202140232 cagcggacattc-ggggatgtatgaGCTGAGTGCCTCTTTCCCCATCTCTATACCTGGCTCCGCATCCCCAGGCCAGAGTGGGGCCATCTCTCCAGGCAAGAAGAGAGCGCCTAGGCTGACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CTACAGAGACGCTCCAAGGGAGCTGGAGAGCGCAGGGGTGT--GGGGTCA-------------------------C-GTGGTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2800561 233 - 123690457 cagcagacattc-ggagatgtatgaGCTGAGTGCCTCTTTCCCCATCTCTATACCTGGCTCCGCATCCCCAGGCCAGACTGGGGCCATCTCTCCAGGCAGGAGGAGAGCGCTTAGGCTGACCCCGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCACAGAGACCCTCCAAGGGAGCTGGAGAGCGCAGGGGTGT--GGGGTCA-------------------------C-GTGGTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 66335 232 - 111706 cagcggacattc-ggggatGTGTGAGCTGAGTGCCTCTTTGCCCATCTCCGTACCTGGCTCCGCATCCCTAGGCCAGAGTGGGGCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTGACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTGCAGAGCGCAGGGGCGT---GGGTCA-------------------------C-GTGGTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192379828 232 - 192460366 CAGCGGACATTC-GGGGATGTGTGAGCTGAGTGCCTCTTTGCCCATCTCCGTACCTGGCTCCGCATCCCTAGGCCAGAGTGGGGCCATCTCTCCAGGCAAGAAGAGAGCACCTAGGCTGACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTGCAGAGCACAGGGGCGT---GGGTCA-------------------------C-GTGGTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302328 232 + 187378091 CAGCAGACATTC-GGGGATGTGTGAGCTGAGTGCCTCTTTGCCCATCTCCGTACCTGGCTCCGCATCCCTAGGCCAGAGTGGGGCCATCTCTCCAGGCAAGAAGAGAGCGCCTAGGCTGACCCTGTCCCTGTAGACCCGGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTGCAGAGCACAGGGGTGT---GGGTCA-------------------------C-GTGGTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91325584 232 + 91754291 CAGCGGACATTC-GGGGATGTGTGAGCTGAGTGCCTCTTTGCCCATCTCCGTACCTGGCTCCACATCCCTAGGCCAGAGTGGGGCCATCTCTCCAGGCAAGAAGAGAGCGCCTAGGCTGACCCTGTCCCTGTAGACCCAGATGAGCAGGATGTTT--GGGGGAAGACTGAGAATCAGCTC-CCGCAGAGACCCTCCAAGGGAGCTGCAGAGCACAGGGGTGT---GGGTCA-------------------------C-GTGGTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73804569 232 + 74750902 cagctgacattc-GGGGATGAATGAGCTGAGTGCCTCTTTCCCCATCTCC--ACCTGGCCCCGTAGCCCCAGGCCAGAGTGGAGTCATCTTTCCAGGCAAGAAGAGAGCACATAGTCTGACCCTGTCCCTGTAGACCCAGATGAGCAGGCTGTTT--GGGGGAAGACTGAGAGTCAGCTC-CCATAGAGACCCTCCAACAGAGCTGGAGAACACAGGGACGA--GGGGTCA-------------------------CGGTGGTCT i calJac3.chr17 C 0 C 0 s mm10.chr16 32766361 225 + 98207768 --GTAGTCTCTC-AGA----TTAGGACAGAATGTGTCTT---CTATCTTC--ATTTGGCCTTGTGCCCTCAGCCCAAAGTGGAG-AATCTTTCTAGGCCAAGGAAGAGGGCCTACTTTGATGTTAT-CCTCTGGTCCCATGATAACAGGATGTTTTGGGGGAAAGACTTAGAATCACCTCACCATAAAGACCTTCCAAGGGAGCCAGGGTACACAGAGGTAAATAGAAAAG-------------------------G-GTGGCTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2300041 253 - 31377067 CAGCTGCCATCCTAGGGACTTATGA-TTGAGTGCCTCTTGCCCCATCTTC--ACTTGGCCACAGGGCCCCAGACAAGAATGGGGCCATGT-TCTGGGGAAGGAGGGGGC-CCCAGTCTGACCCTGTGCCTCAGGACCCAGATTACCTGGCTGTCT--CGGGGGAGACATGGAGTCATCTC-CCACAGAGACCTTCCAGAAGAGCCAGAGagcacggggctgg---gggccagggctcaatctcacaacactgagatc-atgatct i canFam3.chr33 C 0 I 122 e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=451863.000000 s hg38.chr3_KI270937v1_alt 30124 214 + 165607 --GTGTCCTCCCGTTCTCTCCCCCGTC-------------------CCATGGCAGTTTCCACAGTTCCCAGACCGTCAGCCGTGCCCTCCCCACTCCCAGCACGTTGAGAGCAGCAGTACTTGGCTCTCCACCCTCAAGACAGGAAATTTGCTTAGCTCCTACCATGCG-------CCCTGCTGCACAGTGGCCCCAAT--GCCTGCAAAAGAGACAGCACCCTATTCACTGCCCAAGGTC-ATG- s ponAbe2.chr3 2346067 212 - 202140232 --GTGTCCTCCCCTTCTCTCCCCTGTC-------------------CCGTGGCAGTTTCCACAGTTCCCAGACTGTCAGCCGTGCCCTCCCCACTCCCAGCACGTTGAGAGCAGCAGTACTTGGCTCTCCACCCTCAACACAGG-AATTTGCTTAGCTGCTACCATGCG-------CCCTGCTGCACAGTGGCCCCCAT--G-CTGCAAAAGAGACAGCACCCTGTCCACTGCCCAAGGTC-ATG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2800794 211 - 123690457 --GTGTCCTCCCCTTCTCTCCCCTGTC-------------------CCACGGCAGTTTCCACAGTTCCCAGACTGTCAGCCATGCCCTCCCCACTCCTAGCCCATTGAGAGCAGCAGTACTTGGCTCTCCACCCTCAAGACG---AATTTGCTTAGCTCCTACCATACG-------CCCTGCTGCACAGTGGCCCCAAT--GCCTGCAAAAGAGACAGCACCCTGTCCACTGCCCAAGGTC-ACG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 66567 214 - 111706 --GTGTCCTCCCGTTCTCTCCCCTGTC-------------------CCTTGGCAGTTTCCACAGTTCCCTGACTGTCAGCCGTGCCCTCCACACTCCCATTATGTTGAGAGTGTCAGTACTTGGCTGTCCACCCTCAGGACAGGAAATCTGCTTATCCCCTACCATGCA-------CCCTGCTGCACAGTGGCCCCAGT--GCCTGAAAAAGAGACAGCACCCTGTCCACTGCCCAGGGTC-ACG- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380060 214 - 192460366 --GTGTCCTCCCGTTCTCTCCCCTGTC-------------------CCTTGGCAGTTTCCACAGTTCCCTGACTGTCAGCCGTGTCCTCCCCACTCCCATTATGTTGAGAGTGTCAGTACTTGGCTGTCCACCCTCAGGACAGGAAATCTGCTTATCCCCTACCATGCA-------CCCTGCTGCACAGTGGCCCCAGT--GCCTGAAAAAGAGACAGCACCCTGTCCACTGCCCAGGGTC-ACG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302560 214 + 187378091 --GTGTCCTCCCATTCTCTCCCCTGTC-------------------CCTTGGCAGTTTCCACAGTTCCCTGACTGTCAGCCAtgccctccccactcccattATGTTGAGAGTGTCAGTACTTGGCTGTCCACCCTCAGGACAGGAAATCTGCTTATCCCCTACCATGCA-------CCCTGCTGCACAGTGGCCCCAGT--GCCTGCAGAAGAGACAGCACCCTGTCCACTGCCCAGGGTC-ATG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91325816 205 + 91754291 --GTGTCCTCCCGTTCTCTCCCCTGTC-------------------CCTTGGCAGTTTC--CCGTTCCCTGACTGTCAGCCATGCCCTCCCCACTCCCAGCACGTTGAGAGCGTCAGTACTTGGCTGTCCACCCTCCAGACAGGAAATCTGCT-----CCTACCATGCG-------CCCTGCTGCACAGTGGCCCCAGT--GCCTG--AAAGAGACAGCACCCTGTCCACTGCCCAGGGTC-ACG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73804801 214 + 74750902 --GTGTCCTCTCGTTCTCTCACCCGTC-------------------CCATGGCAGTTTCCACAGTTCCTGGACTGTCAGCCGCACCCTCCCCACTCCCAGCATGTTGAGGGCGGTGGTTCTTGGCTCTCCACCCTCAAGAAAGGAAATGTGCTTAGCTCCTACCATGTG-------CTCTGCTGCACAGT-CCCCCAAT--GCCTGCAAAAGAGACAGCGCCCTGTCCACCGCACAAGGTCAATG- i calJac3.chr17 C 0 C 0 s mm10.chr16 32766586 136 + 98207768 --GCATCTGCCCACCCTGGGGACTGCT-------------------C-----TAGTCTCTCGTATCTTCATGCCATCATCTCTGTTCTCCCTTCTGCTGGCTCTCTGAGGG--------CTTG-------------------------------------TACTATG------------TGCTATGTAATAACCCCA-------------------------CCATTCGTTCAACGAGGAC-ATA- i mm10.chr16 C 0 I 58 s canFam3.chr33 2300416 239 - 31377067 GTGGGTCCTCC--TTCCACCCCCTGCCACTGCTCTGCCCCCGGCCATCACAGCAGCCTCCAGGGTCCCCAGACTGGCGGTCATACCCTCC-CGCTCCT-GCACTTTGGGGGCAGGGGGACCCA--CCGCCACCCTTCAAGAAAGCAAGCCCCTTAGCCACAGCCACGAGCTCGGGCCCCTGGGGCTTTGCTGCCCCAGCAAGCGTGCGAGGGAGATGGTGACCGGTCCACGGCCCGAGGTT-ACCA i canFam3.chr33 I 122 C 0 e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=59563.000000 s hg38.chr3_KI270937v1_alt 30338 29 + 165607 AGAAGGGCCATGCTGGATTCCAAAGCCAT s ponAbe2.chr3 2346279 29 - 202140232 AGAAGGGCCATGCTGGATTCCAAAGCCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801005 29 - 123690457 AGAAGGGCCACGTTGGATTCCAAAGCCAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 66781 28 - 111706 AG-AGGGCCGTGCTGGATTCCAAAGCCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380274 28 - 192460366 AG-AGGGCCGTGCTGGATTCCAAAGCCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302774 28 + 187378091 AG-AGGGCCGTGCTGGATTCCAAAGCCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326021 28 + 91754291 AG-AGGGTTGtgctggattccaaagccat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805015 25 + 74750902 AGAAGGGCCATGCTGCATTCCAAAG---- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2300655 29 - 31377067 AGCAGGGCAGGACCCGAGTCCGGCGCCGT i canFam3.chr33 C 0 C 0 e mm10.chr16 32766722 58 + 98207768 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=73468.000000 s hg38.chr3_KI270937v1_alt 30367 41 + 165607 GCTCTTGCCACCAACACCGCCCTGCCCTACCAAGCTCTCCA s ponAbe2.chr3 2346308 41 - 202140232 GCTCTTGCCACCAACActgccctgccctgccaagctctcca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801034 41 - 123690457 GCTCTTGCCACCAACACCGCCCTGCCCTGCCAAGCTCTCCA i nomLeu3.chr11 C 0 I 6 s rheMac3.chrUn_JH291127 66809 41 - 111706 GCTCTTGCCACCAACACCACCCCGTCCTACCCAGCTCTCCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380302 41 - 192460366 GCTCTTGCCACCAACACCAccccgtcctacccagctctcca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302802 41 + 187378091 GCTCTTGCCACCAACACCACCCCGTCCTACCCAGCTCTCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326049 41 + 91754291 gctcttgccaccaacaccaccctgccccACCCAGCTCTCCA i chlSab2.chr15 C 0 C 0 e mm10.chr16 32766722 58 + 98207768 I e calJac3.chr17 73805040 0 + 74750902 C e canFam3.chr33 2300684 0 - 31377067 C e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=12568.000000 s hg38.chr3_KI270937v1_alt 30408 12 + 165607 CCAACACC-----GCCC s ponAbe2.chr3 2346349 17 - 202140232 ccaacaccgccctgccc i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 66850 12 - 111706 CCGACACT-----GCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380343 12 - 192460366 ccgacact-----gccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302843 12 + 187378091 CCGACACT-----GCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326090 12 + 91754291 CCAACACC-----GCCC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32766722 58 + 98207768 I e calJac3.chr17 73805040 0 + 74750902 C e canFam3.chr33 2300684 0 - 31377067 C e nomLeu3.chr11 2801075 6 - 123690457 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=1962.000000 s hg38.chr3_KI270937v1_alt 30420 31 + 165607 TGCCCTGCCAAGCTCTCCACCAACACCGCCC s ponAbe2.chr3 2346366 31 - 202140232 tgccctgccAAGCTCTCCACCAACACCGCCC i ponAbe2.chr3 C 0 I 351 s rheMac3.chrUn_JH291127 66862 10 - 111706 TGCCCTGCCA--------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380355 10 - 192460366 tgccctgcca--------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302855 10 + 187378091 TGCCCTGCCA--------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326102 4 + 91754291 TGCC--------------------------- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32766780 17 + 98207768 TGCCACGCCTGACTCCT-------------- i mm10.chr16 I 58 C 0 e calJac3.chr17 73805040 0 + 74750902 C e canFam3.chr33 2300684 0 - 31377067 C e nomLeu3.chr11 2801075 6 - 123690457 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=23056.000000 s hg38.chr3_KI270937v1_alt 30451 31 + 165607 TGCCCTGCCAAGCTCTCCACCAACACCGCCC s ponAbe2.chr3 2346748 31 - 202140232 tgccctgccaagctctccaccaacaccgtcc i ponAbe2.chr3 I 351 C 0 s rheMac3.chrUn_JH291127 66872 24 - 111706 -------CCAAGCTCTCCACTGACCCCACCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380365 24 - 192460366 -------ccaagctcttcactgaccccgccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302865 24 + 187378091 -------CCAAGCTCTCCACTGACCCTGCCC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73805040 24 + 74750902 -------CCATGCTCTTCAGCAACACCGTCC i calJac3.chr17 C 0 C 0 s mm10.chr16 32766797 19 + 98207768 ------------CTTGCTGCTGATATCACCA i mm10.chr16 C 0 C 0 e canFam3.chr33 2300684 0 - 31377067 C e chlSab2.chr15 91326106 0 + 91754291 C e nomLeu3.chr11 2801075 6 - 123690457 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=-134.000000 s hg38.chr3_KI270937v1_alt 30482 44 + 165607 TGCCCTGCCAAGCTCTCAACCAACACC--ACCCTGCCCTGCCAAGC s ponAbe2.chr3 2346779 46 - 202140232 tgccctgccaagctctccaccaacaccccaccctgccctgccaagc i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 66896 23 - 111706 TGCC--ACCCAGCTCTCCGGCTGGG--------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380389 23 - 192460366 tgcc--ACCCAGCTCTCCGGCTGGG--------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302889 22 + 187378091 TGCC--ACCC-GCTCTCCGGCTGGG--------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326106 21 + 91754291 --CC--ACCCAGCTCTCCGGCTGGG--------------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805064 21 + 74750902 TGCCCTGCCACGCTCTCCAGC------------------------- i calJac3.chr17 C 0 I 4 s mm10.chr16 32766816 24 + 98207768 TACTCTTCCAAACATGCCAGTTGC---------------------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300684 20 - 31377067 -----TGCCCAAACCCCCAGCTGGG--------------------- i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 2801075 6 - 123690457 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=1057539.000000 s hg38.chr3_KI270937v1_alt 30526 420 + 165607 TTCTCCAGGTCCTCAACCTCCCCGACTCAC-TGCTGTTCTCCGCAGCCCAGGAACTGGAGCCACAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCACGTGGGCTGTGCTACATACAGGCCCCCACAGCCCGGTGAGCGACAGGGCCCAGGCCCAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCGGGAGGTGGCATCTGGATAAGGAGTAGGGGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGTGGATGGTCAGTGGAGGGGCTTTGTACCTGA-GTTGGGGAAGGAGTGAGAATAGCGG---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCTGTGAACATCTCCCCAGCTG- s ponAbe2.chr3 2346825 405 - 202140232 t-ctcca--------------ccaactcac-cgccctgccctgcAGCCCAGGAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAGTGACAAGCCCTACCTCTGTGCCCGGTACCAGCAGAGGCGGCCCCGCATGGGCTGTGCTACATACAGGCCCCCACGGCCCGGTGAGCGACAGGGCCCAGGCCCAGGAAGAGCCTCTGGGGAGGGGGACCTTCTGGGCTTCCGGGAGGTGGCGTCTGGATGAGGAGTAGGAGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGTCAGCGGAGGGGCTTTGTACCTGA-GTTGGGGAAGGAGTGAGAATAGCGG---GGCACGAAAATGCAAGGAGGCTTGAGGGGAGGATTCTGTGCTCCGTGAACATCTCCCCAGCTG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801081 417 - 123690457 TTCTCCAGGTCCTCAGCCTCCCCAGCTCAC-TGCTCTTCTCCGCAGCCCAGGAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAAGCGGCCCCGCGTGGGCTGTGCTACATACAGGCCCCCACGGCCTGGTGAGTGACAGGGCCCAGGCCCAGGAAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCGTCTGGATGAGCAGTAGGGGCAGAGCCGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGTCAGTGGAGGGGCTTTGTACCTGA-GTTGGGGAAGGAGTGAGAGTAGCGG---GGCATG-AAATGCAAGAAGCCTTGAGGGGAGGATTCTGTGCTCTCTGAACA--TCCCCAGCTG- i nomLeu3.chr11 I 6 C 0 s rheMac3.chrUn_JH291127 66919 421 - 111706 TCCTCCAGGTCCTCAGCCTCACCGACTCAC-TGCTCCTCTCTGCAGCCCCGGAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAGCCTCAGGGCCCAGGCCCAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCATCTGGATGAGGAGTAGGGGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGCCAGCGGAGGGGCTTTGTACCTGGTGTTGGGGAAGGAGTGAGAATAGTGG---GGCACAAAAGGGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTGCTG- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380412 421 - 192460366 TCCTCCAGGTCCTCAGCCTCCCCGACTCAC-TGCTCCTCTCTGCAGCCCCGGAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAGCCTCAGGGCCCAGGCCCAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGGCTTCCAGGAGGTGGCATCTGGATGAGGAGTAGGGGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGCCAGTGGAGGGGCTTTGTACCTGGTGTTGGGGAAGGAGTGAGAATAGTGG---GGCACAAAAGTGCAAGGAGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTGCTG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187302911 409 + 187378091 TCCTCCAGGTCCTCAGCGTCCCCGACTCAC-TGCTCTTCTCTGCAGCCCCGGAACTGGAACCGCAGAACTGGTGCTGCCTCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAGCCTCAGGGCCCAGGCCCAGGCAGAGCCtctggggagggggagcttcTGGGCTTCCAGGAGGTGGCGTCTGGATGAGGAGTAGGGGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGCCAGTGGAGGGGCTTTGTACCTGGTGTTGGGGAAGGAGTGAGAATAGTGG---GGCAC------------AGCCTTGAGGGGAGGAATCTGTGCTCCGTGAACATCTCCCCTGCTG- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326127 421 + 91754291 TCCTCCAGGTCCTCAGCCTCCCTGACTCAC-TGCTCTTCTCTGCAGCCCCGGAACTGGAACCGCAGAGCTGGTGCTGCCTCTGGAATGACAAGCCTGACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGTGTGGGCTGTGCTACATACAGACCCCCACGGCCTGGTGAGCGTCAGGGCCCAGGCCCAGGCAGAGCCTCTGGGGAGGGGGAGCTTCTGGACTTCCAGGAGGTGGCATCTGGATGAGGAGTAGGGGCAGAGCTGTGGCCACAAGGG-AAGATGGAGATGACGCCAGTGAT-GGGCGGACGGCCAGTGGAGGGGCTTTGTACCTGGTGTTGGGGAAGGAGTGAGAATAGTGG---GGCACAAAAGTGCAAGGAGCCTTGAGGGAAGGAATCTGTGCTCCGTGAACATCTCCCCTGCTG- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805089 412 + 74750902 ATCTCCAGGTCCTCGGCCTCCCCGACTCAC-TGCTCTTCTCCACAGCCCAGGAACTGGAGCCGCAGAGCTGGTGCTGCCGCTGGAATGACAAGCCCTACCTCTGTGCCCTGTACCAGCAGAGGCGGCCCCGAGTAGGCTGCGCTGCATACAGGCCACCACGGCCCGGTGAGGGTCAGGG-CCAGGCTCAGGCAGAGCATCTGGGGA-GGGGAGCTTCTGGGCCTCCGGGA--TGACGTCTGAATGAGGAGTAGGGGCAGAGCTGTGGCCACAAGGGAAAGATGGAGAGGGTGCCAGTGATGGGGCTGATGGCAAATGGAGGCCCTTTGTACCTGGTGCTGGAGAAGGAGTGAGAATGG-GG---GGCACGAAAGTGC-AGGGGCCTTGAGGGGAGGATTCGATGA-----GAACATCTCCCCAGCTG- i calJac3.chr17 I 4 I 3 s mm10.chr16 32766840 374 + 98207768 TTCCCCGGGGCCCCCGCC-CTCTGACAAAC-TGTCCTTCTTCACAGATGAGGAGCAGGAGGCACAGAACTGGTGCTGCCAATGGAACGACAAGCCCTCGTTCTGTGTCTGGTACCAGCTTAGGCGGCCCCGTGTCAGCTGTGCTGGGTACAGGCCCCCACGGCCCGGTGAGCATCATGG--------------------TTGGGGTGGATTAGC--------------AAGGGGCCAACTTCCTAA---------ACAGAACTGCAGCCAC-AGGG-ATGATGTTGACAGGTCTTGCGTG-AAGCTAACAGCAAAC--AGGGACTTTGGACATGGCTTTTGCAAAGGGATGAGGACTGAGGCCAGGGACTACAAGGGAAGAGGACTTTGGGGGTAGATTCTGGATGCCTGGAGAATTTGCCCAA---- i mm10.chr16 C 0 C 0 s canFam3.chr33 2300704 314 - 31377067 TGCTGCAGGTCCTGCGTCTCCCCGCAACATGTGCTCTCCCCCACAGGCCGAGAACTGGAGCCCCAGAACTGGTGCTGCCGCTGGAGCGACCGGCCCATGCTCTGCGCCCTGTACCAGCAGAGGCGGCCCCGCGTGGGCTGCGCCGGGTACCGGCCCCCGAGGCCCGGTGAG--------------CCTGGGCAGGGC----GGTGGGGCCCAACCGAGGGGCCTT--GTGGGTGGCACCGGGA--------GGGGGCCGAA--------GCAACCG-TAGATG----TGACTTgggcgcc-gggggg---------gggggcgcTTTG------------------------------------GGGATG---------------------------TTCTCTACTCCGTGAGCATCTCGCGGGCCTG i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=5348.000000 s hg38.chr3_KI270937v1_alt 30946 2 + 165607 AG s ponAbe2.chr3 2347230 2 - 202140232 AG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801498 2 - 123690457 AG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 67340 2 - 111706 AG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192380833 2 - 192460366 AG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303320 2 + 187378091 AG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326548 2 + 91754291 AG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2301018 2 - 31377067 AG i canFam3.chr33 C 0 C 0 e mm10.chr16 32767214 0 + 98207768 C e calJac3.chr17 73805501 3 + 74750902 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=35018.000000 s hg38.chr3_KI270937v1_alt 30948 16 + 165607 TCCGCCCGGACAAGTG s ponAbe2.chr3 2347232 16 - 202140232 TCGGCCTGGACAAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801500 16 - 123690457 TCCGCCTGGACAAGTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 67342 16 - 111706 TCCACCTGGACAAGTG i rheMac3.chrUn_JH291127 C 0 I 327 s macFas5.chr2 192380835 16 - 192460366 TCCACCTGGACAAGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303322 16 + 187378091 TCCACCTGGACAAGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326550 16 + 91754291 TCCACCTGGACAAGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805504 16 + 74750902 TCCACCTGGACAAGTG i calJac3.chr17 I 3 C 0 s mm10.chr16 32767214 1 + 98207768 ---------------G i mm10.chr16 C 0 C 0 s canFam3.chr33 2301020 10 - 31377067 TTGGCCTGGA------ i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=1906.000000 s hg38.chr3_KI270937v1_alt 30964 28 + 165607 CCCCAGTCGACTGCAGTGAGGAACCTCA s ponAbe2.chr3 2347248 6 - 202140232 CCCCAG---------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801516 6 - 123690457 CCGCAC---------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192380851 28 - 192460366 TCCCCCCTGACTACAGTGAGGAATCCCA i macFas5.chr2 C 0 I 151 s papAnu2.chr2 187303338 28 + 187378091 TCCCCCCTGACTACAGTGAGGAATCCCA i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 91326566 28 + 91754291 TCCCCCCTGACTACAGTGAGGAATCCCA i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73805520 28 + 74750902 CCCTATCTGACTGCAGTGAGGAATCTCA i calJac3.chr17 C 0 I 1 s mm10.chr16 32767215 19 + 98207768 CTCTAGCCAACTAAGATGG--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2301030 14 - 31377067 -----------GGCCGTGGGGGGCT--- i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 67358 327 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=1826.000000 s hg38.chr3_KI270937v1_alt 30992 4 + 165607 CCCT s macFas5.chr2 192381030 4 - 192460366 CCCT i macFas5.chr2 I 151 C 0 s papAnu2.chr2 187303367 4 + 187378091 CCCT i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 91326595 4 + 91754291 CCCT i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73805549 3 + 74750902 CCC- i calJac3.chr17 I 1 T 51 e ponAbe2.chr3 2347254 0 - 202140232 C e mm10.chr16 32767234 0 + 98207768 C e canFam3.chr33 2301044 0 - 31377067 C e rheMac3.chrUn_JH291127 67358 327 - 111706 I e nomLeu3.chr11 2801522 0 - 123690457 C e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=4288.000000 s hg38.chr3_KI270937v1_alt 30996 11 + 165607 GAGTCCTCCT-G s macFas5.chr2 192381034 10 - 192460366 GAGTCCACCT-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303371 10 + 187378091 GAGTCCACCT-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91326599 11 + 91754291 GAGTCCACCTG- i chlSab2.chr15 C 0 I 314 s calJac3.chr17 73805501 10 + 74750902 GAGTCCACCT-- i calJac3.chr17 T 51 I 1 s mm10.chr16 32767234 7 + 98207768 AAGTCCT----- i mm10.chr16 C 0 C 0 e ponAbe2.chr3 2347254 0 - 202140232 C e canFam3.chr33 2301044 0 - 31377067 C e rheMac3.chrUn_JH291127 67358 327 - 111706 I e nomLeu3.chr11 2801522 0 - 123690457 C e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=-2456.000000 s hg38.chr3_KI270937v1_alt 31007 16 + 165607 GACAAGTGCCGCACCT s ponAbe2.chr3 2347254 2 - 202140232 --------------CC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801522 2 - 123690457 --------------CT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381044 14 - 192460366 GACAGGTGCCCC--CC i macFas5.chr2 C 0 I 1 s papAnu2.chr2 187303381 14 + 187378091 GACAGGTGcccc--cc i papAnu2.chr2 C 0 I 1 s calJac3.chr17 73805512 16 + 74750902 GACAAGTGCCCTATCT i calJac3.chr17 I 1 C 0 s mm10.chr16 32767241 5 + 98207768 ------TACCT----- i mm10.chr16 C 0 C 0 e canFam3.chr33 2301044 0 - 31377067 C e chlSab2.chr15 91326610 314 + 91754291 I e rheMac3.chrUn_JH291127 67358 327 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=41466.000000 s hg38.chr3_KI270937v1_alt 31023 25 + 165607 GACTGCAGTGAGGAACCTCAGCCCT s ponAbe2.chr3 2347256 25 - 202140232 GACTGCAGGGAGGAACCTCGGCCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801524 25 - 123690457 GACTGCAGTGAGGAATCTCAGCCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381059 25 - 192460366 GACTGCAGTGAGGAATCTCAGCCGG i macFas5.chr2 I 1 C 0 s papAnu2.chr2 187303396 25 + 187378091 AACTATAATGAGGAATCTCAGCCCT i papAnu2.chr2 I 1 I 365 s chlSab2.chr15 91326924 25 + 91754291 GACTGCAGTGAGGAATCTCAGCCGG i chlSab2.chr15 I 314 C 0 s calJac3.chr17 73805528 25 + 74750902 GACTGCAGTGAGGAATCTCAGCCCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32767246 25 + 98207768 GCTGGGAGTAAGAGTCCATGGCCCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2301044 15 - 31377067 ----------GGGATCCGCACCCCG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 67358 327 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=8741.000000 s hg38.chr3_KI270937v1_alt 31048 15 + 165607 ACACATGATTTGTCA s ponAbe2.chr3 2347281 15 - 202140232 ACGCATGATTTGTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801549 15 - 123690457 ACGCATGATTTGTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192381084 15 - 192460366 GCACTTGGTTTGTCA i macFas5.chr2 C 0 I 17 s chlSab2.chr15 91326949 15 + 91754291 GCACTTGGTTTGTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805553 15 + 74750902 ACCCATGGTGTGTCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32767271 7 + 98207768 -------AATTGGC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2301059 7 - 31377067 --------CCAGCCG i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 67358 327 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=752553.000000 s hg38.chr3_KI270937v1_alt 31063 335 + 165607 TGCTGAGGCAGCATCT--CTTTTTTCCTTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAGTTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAAGACGGGAACTCCTCCTTCCTGCTTCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAGTGA--------------------------------------------GGGGTGCCGGGAAC------CTCCCTGCATTCC-----------ACCCACAGG-----GA----------------------CCTTCAGCCACATACTGAGGCCGAGGAGAa----------------------------------------------------------ggaagagagcgaaggaggg s ponAbe2.chr3 2347296 333 - 202140232 TGCTGAGGCGGCATCT--C--TTTTCCTTCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAGTGA--------------------------------------------GGGGCGCCGGAGAC------CTCCCTTCATTCC-----------ACCCACAGG-----GA----------------------CCTTCAGCCACACACTGAGGCCGAGGAGAA----------------------------------------------------------GGAAGAGAGCGAAGGAGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801564 335 - 123690457 TGCTGAGGCGGCATCT--CTTTTTTCCTTCCAGCCTGGATGTTCGGGGACCCCCACATTACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTGGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCGGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTGAGTGA--------------------------------------------GGGGCGCCAGGGAC------CTCCCTGCCTTCC-----------ACCCACAGG-----GA----------------------CCTTCCGCCACATACTGAGGCCGgggagaa----------------------------------------------------------ggaagagagcgaagaaggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 67685 332 - 111706 TGCTGAGGCGGCATCT--CTTTTTT--CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAGTGA--------------------------------------------GGGGCG-CGGGGAC------CTCCCTGCATTGC-----------ATCCACAGG-----GA----------------------CCTTCAGCCACACACTGAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG i rheMac3.chrUn_JH291127 I 327 C 0 s macFas5.chr2 192381116 332 - 192460366 TGCTGAGGTGGCATCT--CTTTTTT--CCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGAGACTTCCTGCTGGTCGGGGCCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACGGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCTCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAGTGA--------------------------------------------GGGGCG-CGGGGAC------CTCCCTGCATTGC-----------ATCCACAGG-----GA----------------------CCTTCAGCCACACACTGAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAAGAG i macFas5.chr2 I 17 C 0 s chlSab2.chr15 91326964 306 + 91754291 TGCTGAGGCAGCATCT--CTTTTTTCCCCCCAGCCTGGATGTTCGGGGACCCCCACATCACCACCTTGGATGGTGTCAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCAGGACCCAGGACGGGAACTCCTCCTTCCTGCTGCAGGGCCGCACCGCCCAGACTGGCTCAGCCCAGGCCACCAACTTCATCGCCTTTGCGGCCCAGTACCGCTCTGGCAGCCTGGG---CCCCGTGACGGTGAGTGA--------------------------------------------GGGGCG-CG------------------------------------------GG-----GA----------------------CCTTCAGCCACATACTGAGGCTGAGGAGAA----------------------------------------------------------GGAAGACAGCGAAGAC--- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805568 339 + 74750902 TGCTGATGTGGTATCT--CTTTTTTCCTTCCAGCCTGGATGATCGGGGACCCCCACATCACCACCTTAGACGGTGTGAATTACACCTTCAATGGGCTGGGGGACTTCCTGCTGGTCCAGGCCCAGGACGGGAACTCCTCCTTCCAGCTGCAGGGCCGCACCGCCCAGACCGCCTCAGCCCAGGCCACCAACTTCGTTGCCTTTGCTGCTCAGTACCGCTCCAGCAGCCTGGG---CCCCGTCACGGTTCGTGA--------------------------------------------GGGGCACCTGGGAC------CT-CCTGCATTTC-----------ACCCACAGGCATTTCA----------------------CCTTCAGCCGGATATTGAGGCCCAGGAGAA----------------------------------------------------------GGAAGAGGAGAAAGAAGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32767278 335 + 98207768 --------TAGCATGTAACCTCCTTTCTTTTAGCTTGGACATTTGGTGATCCCCACATCACCACTTTGGATAATGCCAACTTCACCTTCAACGGGCTGGGAGACTTTCTGCTGGTCCAGGCCCAGGACAGAAATTCTTCCTTCCTGCTGGAAGGCCGCACTGCCCAGACTGGCACTGCCAAGGCCACTAACTTCATTGCCTTTGCGGCTCAATACAACACCAGCAGCCTGAAGTCTCCCATCACGGTAAGTGA--------------------------------------------GGGGTACCTAGGGT------ATCCTTGCAATCCCTTCCCCAGAACCCCTTAGA-----GA----------------------CCGTCAGCTGGACACT--------GGAAAA----------------------------------------------------------GGAAGAGTACAAAGAAAGG i mm10.chr16 C 0 I 1009 s canFam3.chr33 2301066 455 - 31377067 CGCCAGCGTGGCCTCT--CCTTTCT---TCCAGCCTGGATGTTTGGGGACCCCCACATCACCACCTTGGACGGTGCCAATTACACGTTCAATGGGCTGGGTGACTTCCAGCTGGTCCGGGCCTGGGACGGAAACTCCTCCTTCCTGCTGCTGGGTCGCACCGCCCAGACCGGCTCCGCCCGGGCCACCAACTTCATTGCCTTTGCAGCGAGCTATGAGGCCCGCAGCCTGAG---CCCCGTCACGGTGAGCCAGGGGGTGCTCCAAGGAGGGGAGGAGGCAGAGGGAGCAGAGGGAGGGGGTGCCGGGGGCGGGGGACACCTCGAGAGTC-----------GACCCTATG-----AACGGTGCCAtttgggtcatggctccatcagccg-----tgtgatcctggaggaactactgaccttccagtgcctcacttttcttttcttaagattttatttatttattcatgagagacacagagagag-- i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=493663.000000 s hg38.chr3_KI270937v1_alt 31398 324 + 165607 gaagccgggcaggagg--gagggaggACACAGCCCATCCACGCAG-----CTGTCCCGGAGTAAATCCTGGGGATGG-tggattagggctctggccccacggtttcccagctgcttggcttcgaagaaactac----------ttaatttggttttctcctagtaagaatgggg---atgacattacctgcctcac-gggctgttgtaagagctaaagggcataatccgaaaaccatgc--------ctggccc-tgccgagcac-acggtagacgGCGGC-TGGCATCACC-TCAGGCCGCGGCCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCAGGGGCTCTC s ponAbe2.chr3 2347629 323 - 202140232 GAAGCTGGGCAGGAGG--GAGGGAGGACACAGCCCATCCACGCAG-----CTGTCCCGGAGTAAATCCTGGGGATGG-tggattagggctctggccccacggtttcccagctgtttggcttcgaagaaactac----------ttaacttggttttctcctagtaagaatgagg---atgacattacctgcgtcac-ggggtgttgtaagagctaaagggcataatccgaaaaccatgc--------ctggccc-tgccgagcac-acggtagacgGCGGC-TGGCATCACC-TTGGGCCGCGGCCTCCAGCGCCTTCCTCCCGGCCCAGGGCGCAGCTTCCAG-CCCGGGGGCTCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2801899 324 - 123690457 gaagctgggcaggagg--gagggaggACACATCCTATCCACGCAG-----CTGTCCCGGAGTCAATCCTGGGGATGG-tggattagggctctggccccacggtttcccagctgtttggcttcgaagaaactac----------tgaacttggttttctcctagtaagaatgggg---ataacattacctgcctcat-gggctgttgtaagagctaaaggggataatccgaaaactatgc--------ctgaccc-tgctgagcac-agggtagacgGCGGC-TGGCATCACC-TCGGGCGGCGGCCTCCAGCGCCCTCCTCCCGGCCCAGGGCGCAGCTTCCAGCCCCGGGGGCTCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68017 321 - 111706 GAAGCCGGGCAGGAGG--GAGGGA-GCCACACCCCATCCGCGCAG-----CTGTCCCGGAGTAAATCGTGCGGATGG-GGGATTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------ttaacttggttttctcctggtaagaacgggg---ataacatgacttgcctcac-gggctgttgtgagagctaaaggggctcatccgaaaaccatgc--------ctggccc-tgcggagcac-acggtagac-gGGGC-TGGCGTCA-C-TCGGGCCGCGGCCTCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGGGCTCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192381448 321 - 192460366 GAAGCCGGGCAGGAGG--GAGGGA-GCCACACCCCATCCGCGCAG-----CTGTCCCGGAGTAAATCGTGCGGATGG-GGGATTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------ttaacttggttttctcctggtaagaacgggg---ataacatgacttgcctcac-gggctgttgtgagagctaaaggggctcatccgaaaaccatgc--------ctggccc-tgcggagcac-acggtagac-gGGGC-TGGCGTCA-C-TCGGGCCGCGGCCGCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGGGCTCTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327270 321 + 91754291 -AAGCCGGGCAGGAGG--GAGGGA-GCCACACCCCATCCGCGCAC-----CTGTCCCGGAGTAAATCCTGGGGATGG-GGGATTACGGCTctggcgccacggtttcccagctgtttggcttcgaagaaactac----------ttaacttggttttctcctggtaagaacgggg---ataacatgacttgcctcac-gggctgttgtgagagctaaaggggatcatccgaaaaccatgc--------ctggccc-tgcggagcac-accgtagacgGGGGC-TGGCGTCA-C-TCGGGCCGCGGCCTCCAGCGCCTTCCTCCAGGCCCAGGGCGCAGCTTCCAGCCCCGGGGGCTCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73805907 282 + 74750902 GAAGCCGGGCAGGAGG--GAGGGAGGTCACATTCCACCCTCACAG-----CTGTCCCCGAGTAAATCCTGGGGGTGGCAGGATGAGGTttctggcaccacggtttcccagctgtttggtttcaaagaaactac----------ttaacttgg-tttcttctagtcggaatggggataataacgttacctgcctcac-aggctgctgtgggagttgaaggggatcatctgaaaaccaggc--------ctgg----tgcagagcac-acagt-------------------------GGCTGCAGCCTCCAGCCCCTTCCTC-------------------CCAGCCCCAGGCACTCTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2301521 318 - 31377067 ---gcagagacacaggcagaggga-gacgcaggc--tccctgcaggagcccgatgcaggactcgatcccacgaccca-gggatcacg-ccctgggcccgagg-----cagaggct---cacccaaggagccacccgggcgcctctgcctcccttttcttggagtaa-actgagg---atgacaata-ttgcctcacggggctgttgtgagctttaaatgagatcatctgagaaacgtgcgctctCAGCCGGCCCATGCCGCGCCCTAGCGCTGTCGGCGGCGCAACCTCACCGTCAGGC-----CCACCCGCCTCGTCCTCGGGGCTCGGG--------------TCCAGGCCCTCTG i canFam3.chr33 C 0 C 0 e mm10.chr16 32767613 1009 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=385528.000000 s hg38.chr3_KI270937v1_alt 31722 169 + 165607 CCAGCTGCTTT-CCTGGGCGTCGGCTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGACGCAATCCGTGTCCTGCTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGACGGCGGAGGTAGGTTGGG s ponAbe2.chr3 2347952 169 - 202140232 CCAGCCGCTTT-CTTGGGCGTCGGCTCCACCTGCGGGTCGGGCTCAGGCCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGACGCAATCCGTGTCCTGCTGGATAACCAGACTGTGACATTTCAGCCTGACCATGAAGGCGGCGGAGGTAGGCTGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802223 169 - 123690457 CCAGCCGCTTT-CCTGGGCGTCGGCTCCACCTGCGAGTGGGGCTCAGGTCCCCTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCACGACGCAATCCATGTCCTGCTGGATAACCAGACTGTGACATTTAAGCCTGGCCATGAAGACGGCAGAGGTAGGCTGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68338 169 - 111706 CCAGCCGCTCT-CCTGGGCGTCGGCTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGATGGAATCCATGTCCTGCTGGATAACCAGACTGTGACATTTGAGCCTGGACATGGAGACGGCGGAGGTGGGCTGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192381769 169 - 192460366 CCAGCCGCTCT-CCTGGGCGTCGGCTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGATGGAATCCATGTCCTGCTGGATAACCAGACTGTGACATTTGAACCTGGACATGGAGACGGCGGAGGTGGGCTGGG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327591 169 + 91754291 CCAGCCGCTCT-CCTGGGCGTCGGCTCCACCTGCGGGTCGGGCTCAGACCCCTTCCCATCTCCTTCCAGGTCCAATGGCTCCTTGAGCCTCATGATGGAATCCATGTCCTGCTGGATAACCAGACTGTGACATTTGAGCCTGGCCATGGAGACGGCGGAGGTGGGCTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73806189 169 + 74750902 CCCTATGCTTT-CCTGGGCATCTGCTGCACCTGCGGGTCGGCCTCAGCTCCCCTCCCATCTCCTTGCAGGTTCAGTGGCTCCTTGAGCCTCACGACAGAATCCGTGTTCTGCTTGACAACCAGAATGTGACGTTTGAGCCTGACCACGAAGACGATGGAGGTAGGGTGGG i calJac3.chr17 C 0 I 678 s mm10.chr16 32768622 163 + 98207768 CTGGCCTCATT-TCCAGGCCTCTGCTGTGCCTGCTGGTTGGGCTTAGGCCTCCTCCAATTCTTTCCCAGGTTCAGTGGTTTCTTGAGCCCAGTGACAAAATCCGAGTCGTATACAATAACCAGACTGTGGCCTTTAACAC------CAGAGACACTGAAGGTAGGCTCCG i mm10.chr16 I 1009 C 0 s canFam3.chr33 2301839 160 - 31377067 -TGGCCTCCATGCTCAGGCCCTGGGCCCACCCGAGGGTCCGGCTTAGGCCTCCTCCAATTCTCTCCCAGGTCCGATGGCTCCTCGAGCCCAATGACACGGTCCGCGTGCAGGTCAACAACCAGACTGTGACGTTTGAGACTCAGCA---------CGAAGGTAGGCTGGG i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=10992.000000 s hg38.chr3_KI270937v1_alt 31891 10 + 165607 GAGCGCCGGC s ponAbe2.chr3 2348121 10 - 202140232 GAGCGCCGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802392 10 - 123690457 GAGCGCCGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68507 10 - 111706 GAGCCCCTGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192381938 10 - 192460366 GAGCCCCTGC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327760 10 + 91754291 GAGCGCCTAT i chlSab2.chr15 C 0 C 0 s mm10.chr16 32768785 10 + 98207768 TAATGTCAGC i mm10.chr16 C 0 I 351 s canFam3.chr33 2301999 10 - 31377067 GACAGCCGTC i canFam3.chr33 C 0 C 0 e calJac3.chr17 73806358 678 + 74750902 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=56651.000000 s hg38.chr3_KI270937v1_alt 31901 65 + 165607 CGCCCCCTCCCCGCACCGGGAGCAGCGAGGTGGGCGGGAAGCCGCGTTGCGGTGCAGGGCCGGGC s ponAbe2.chr3 2348131 65 - 202140232 CGCCCCCTCCCCGCACCGGGAGCAGTGAGGTGGGCGGGAAGCCgcgttgcggtgcagggccccgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802402 65 - 123690457 CGCCCCCTCCCCGCACCGGGAGCAGTGAGGTGGGCGGGAAGCCGCGTTGCGGTGCAGGGCCGAGC i nomLeu3.chr11 C 0 T 50 s rheMac3.chrUn_JH291127 68517 52 - 111706 CT-------------CCGGGAGCAGCGAGCTGGGCGGGAAGCCGTGTTGCGGTGCAGGGCCGAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192381948 52 - 192460366 CT-------------CCGGGAGCAGCGAGCTGGGCGGGAAGCCGTGTTGCGGTGCAGGGCCGAGC i macFas5.chr2 C 0 T 23 s chlSab2.chr15 91327770 52 + 91754291 CT-------------CCGGCAGCAGCGAGCTGGGCGGGAAGCCGTGTtgctgtgcagggccgagc i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302009 26 - 31377067 ---------------------------------------AGCTCCCCTGCCTCCTCGGGTCGGGC i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=4088.000000 s hg38.chr3_KI270937v1_alt 31966 16 + 165607 GCGTGGCGGTGCAGGG s ponAbe2.chr3 2348196 16 - 202140232 gcgtggcggtgcaggg i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 68569 16 - 111706 GCATTGCGGTTCAGGG i rheMac3.chrUn_JH291127 C 0 C 0 s canFam3.chr33 2302035 16 - 31377067 TTGGGGGGGCTTGGGG i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e chlSab2.chr15 91327822 0 + 91754291 C e papAnu2.chr2 187303421 365 + 187378091 I e macFas5.chr2 192382000 23 - 192460366 T e nomLeu3.chr11 2802467 50 - 123690457 T e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=4781.000000 s hg38.chr3_KI270937v1_alt 31982 27 + 165607 CCGGGTGCGTTGTGGTGCAGGGCCGGG s ponAbe2.chr3 2348212 27 - 202140232 ccgagcgcgttgcggtgcagggcccag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802417 27 - 123690457 CCGGGAGCAGTGAGGTGGGCGGGAAGC i nomLeu3.chr11 T 50 C 0 s rheMac3.chrUn_JH291127 68585 27 - 111706 TCCAGTGTGTGGCGGTGCAGGGTCCAG i rheMac3.chrUn_JH291127 C 0 C 0 s chlSab2.chr15 91327822 21 + 91754291 ------gcgttgcggtgcagggtccag i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302051 3 - 31377067 -------------------GGG----- i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e papAnu2.chr2 187303421 365 + 187378091 I e macFas5.chr2 192382000 23 - 192460366 T e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=26718.000000 s hg38.chr3_KI270937v1_alt 32009 30 + 165607 CGCGTGGCGGTGCCGCGCCGAGTGCTTTGC s ponAbe2.chr3 2348239 30 - 202140232 tgcgtggcggtgcagggcccagtgcgtggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802444 30 - 123690457 CGCGTTGCGGTGCAGGGCCGAGCGCGTTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68612 30 - 111706 TGCGTGGCGATCCAGGGCCCAGCGCGTTGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192381977 30 - 192460366 CGTGTTGCGGTGCAGGGCCGAGCGCATTGC i macFas5.chr2 T 23 C 0 s chlSab2.chr15 91327843 30 + 91754291 cgtgtggcggtgcagcgtccagggcgttgc i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302054 21 - 31377067 CAC---------CCACCCCGGGAGCCTCGC i canFam3.chr33 C 0 I 85 e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=11904.000000 s hg38.chr3_KI270937v1_alt 32039 11 + 165607 GGTGCAGGGCC s ponAbe2.chr3 2348269 11 - 202140232 ggtgcagggcC i ponAbe2.chr3 C 0 I 19 s nomLeu3.chr11 2802474 11 - 123690457 GGTGCCGGGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68642 11 - 111706 GGGGCAGGGTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192382007 11 - 192460366 GGTTCAGGGTC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327873 11 + 91754291 ggtgcagggtc i chlSab2.chr15 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=5119.000000 s hg38.chr3_KI270937v1_alt 32050 26 + 165607 GGGTGCGTTGTGGTGCAGGGCCCGGT s nomLeu3.chr11 2802485 26 - 123690457 GGGTGCGTTGTGGTGCAGGGCCCGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 68653 26 - 111706 CAGGGCGTGGCCATGCAGGGCCCAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192382018 26 - 192460366 CAGTGTGTGGCGGTGCAGGGTCCAGT i macFas5.chr2 C 0 T 44 s chlSab2.chr15 91327884 4 + 91754291 cagg---------------------- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=43529.000000 s hg38.chr3_KI270937v1_alt 32076 71 + 165607 GCGTGGCGGTGCAGGGCCCGGTGCGTGGCGGTGCAGGGCCGGGTGCGTGGCGGTGCAGGGCCGGGTGCGTG s nomLeu3.chr11 2802511 71 - 123690457 GCGTGGCAGTGCAGGGCCGACTGCGTGGCGGTGCAGGGCCCGGTGCGTGGCGGTGCAGGGCCAAGAGCGCG i nomLeu3.chr11 C 0 T 115 s rheMac3.chrUn_JH291127 68679 71 - 111706 GCGTTGCGGTGCAGGGTCCAGGGCGTGGCGATCCAGGGCCGAGCGCGTTGCGGTGCAGGGTCCAGTGTGTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192382000 71 - 192460366 GCATTGCGGTTCAGGGTCCAGTGTGTGGCGGTGCAGGGTCCAGTGCGTGGCGATCCAGGGCCCAGCGCGTT i macFas5.chr2 T 44 C 0 s chlSab2.chr15 91327888 62 + 91754291 gcgtggcggtgcagggtccagtgcgtggcggtgcagggtccagggcgtggcggtgcagggtc--------- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=2484.000000 s hg38.chr3_KI270937v1_alt 32147 13 + 165607 GCGGTGCAGGGCC s rheMac3.chrUn_JH291127 68750 13 - 111706 GCTGTGCAAGGCC i rheMac3.chrUn_JH291127 C 0 I 6 s macFas5.chr2 192382071 13 - 192460366 GCGGGGCAGGGTC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e chlSab2.chr15 91327950 0 + 91754291 C e papAnu2.chr2 187303421 365 + 187378091 I e nomLeu3.chr11 2802582 115 - 123690457 T e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=492.000000 s hg38.chr3_KI270937v1_alt 32160 4 + 165607 CGGT s macFas5.chr2 192382084 4 - 192460366 CAGG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327950 4 + 91754291 cagt i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68763 6 - 111706 I e nomLeu3.chr11 2802582 115 - 123690457 T e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=18651.000000 s hg38.chr3_KI270937v1_alt 32164 56 + 165607 GCGTTGCGGTGCAGGGCCGGGTGCGTTGCGGTGCAGGGCCCGG---------TGCGTGGCGGTGC s nomLeu3.chr11 2802467 56 - 123690457 GCGTTGCGGTGCCGGGCCGGGTGCGTTGTGGTGCAGGGCCCGG---------TGCGTGGCAGTGC i nomLeu3.chr11 T 115 C 0 s macFas5.chr2 192382088 56 - 192460366 GCGTGGCCATGCAGGGCCCAGAGCGTTGCGGTGCAGGGTCCAG---------GGCGTGGCGATCC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91327954 58 + 91754291 gcgtggcggtgcagggccgagcgcgttgcggtgcAGGGTCCAGNNNNNNNNNNGTGTG------- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e canFam3.chr33 2302075 85 - 31377067 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68763 6 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=9668.000000 s hg38.chr3_KI270937v1_alt 32220 67 + 165607 AGGGCCGAGTGCGTTGTGGTGCCGGGCCCGGTGCGTGGCGGTGCAGGGCCCGGTGCGT---GGCGGTGCA----- s nomLeu3.chr11 2802523 45 - 123690457 AGGGCCGACTGCGT----------------------GGCGGTGCAGGGCCCGGTGCGT---GGCGGTGCA----- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382144 45 - 192460366 AGGGCCGAGCGCGT----------------------TGCGGTGCAGGGTCCAGTGCGT---GGCGGTGCA----- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91328012 30 + 91754291 -------------------------------------GCGGTGCAGGGTCCAGGGCGT---GGCGGTGCA----- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2302160 52 - 31377067 AAGAAGGGGTGTCC----------------------TGTGG-GCTTGGCTCGGGGCCCCTGGGAAAGGCATCCCC i canFam3.chr33 I 85 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e calJac3.chr17 73806358 678 + 74750902 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68763 6 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=3976.000000 s hg38.chr3_KI270937v1_alt 32287 11 + 165607 GGGCCAAGAGA s nomLeu3.chr11 2802568 11 - 123690457 GGGCCAAGAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382189 11 - 192460366 AGGCCAAGTGC i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91328042 11 + 91754291 GGGTCCAGTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807036 11 + 74750902 GAGCCGAGTGC i calJac3.chr17 I 678 C 0 s canFam3.chr33 2302212 4 - 31377067 AGGC------- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68763 6 - 111706 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=8746.000000 s hg38.chr3_KI270937v1_alt 32298 12 + 165607 GCGCAGCCTCTA s nomLeu3.chr11 2802579 12 - 123690457 GCGCAGCCTCTT i nomLeu3.chr11 C 0 I 4 s rheMac3.chrUn_JH291127 68769 12 - 111706 GCGCAGCCTCTT i rheMac3.chrUn_JH291127 I 6 I 1 s macFas5.chr2 192382200 12 - 192460366 GCGCAGCCTCTT i macFas5.chr2 C 0 I 1 s chlSab2.chr15 91328053 12 + 91754291 GCGCAGCCTCTT i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73807047 11 + 74750902 GGACAGCCTTT- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302216 6 - 31377067 -CCCAGG----- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2348280 19 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=113764.000000 s hg38.chr3_KI270937v1_alt 32310 76 + 165607 CCCCCGAGCGGGGCGTGCAG-CTCGCCGGCCT--CTTCT-CCGCCTCCAGTGCAGACCCCTCCCGGCTTCAGCCCCAGGG s ponAbe2.chr3 2348299 76 - 202140232 CCCCCCAGCGGGTCCTGCAG-CTTGCCGGCCT--CTTCT-CTGCCTCCAGTGCGGATCCCTCCCGGCTTCAGCCCCGGGG i ponAbe2.chr3 I 19 C 0 s nomLeu3.chr11 2802595 76 - 123690457 CCCCGCAGCGGGGCCTGCAG-CTCGCCGGCCT--CTTCT-CCGCCTCCAGTGCAGATCCCTCCCGGCTTCAGCCCTGGGG i nomLeu3.chr11 I 4 C 0 s rheMac3.chrUn_JH291127 68782 77 - 111706 CCCCGGAGCGGGGCCTGCAG-CTCGCCGGCCT--CTTCTCCCGCCTCCAGTGCAGATTCCTGCAGGCTTCAGTCCCGGGG i rheMac3.chrUn_JH291127 I 1 M 489 s macFas5.chr2 192382213 77 - 192460366 CCCCGGAGCGGGGCCTGCAG-CTTGCCGGCCT--CTTCTCCCGCCTCCAGTGCAGATTCCTCCAGGCTTCAGTCCCGGGG i macFas5.chr2 I 1 M 584 s chlSab2.chr15 91328066 77 + 91754291 CCCCGGAGCGGGGCCTGCAG-CTCGCCGGCCT--CTTCTCCCGCCTCCAGTGCAGATTCCTCCCGGCTTCAGCCCCgggg i chlSab2.chr15 I 1 I 23 s calJac3.chr17 73807058 78 + 74750902 CCTGGGAGTCGGGCCTG-AG-CTCCGCGGCCTCCCTTCTCCCGCCTCCAGTGCGGAGCCCTCCGGGTGTCAGCCTCGGGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302222 61 - 31377067 CCCCCAAGCGGCCCTCGGAGCCTCGCC--CCG--CCCCTGCCCCTTCC----------CCCCCAAGTCTTGGGCC----- i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=3320.000000 s hg38.chr3_KI270937v1_alt 32386 8 + 165607 GCGGGGTG s ponAbe2.chr3 2348375 8 - 202140232 GCggggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2802671 8 - 123690457 GCGGGGTG i nomLeu3.chr11 C 0 I 379 s chlSab2.chr15 91328166 8 + 91754291 gcaggggg i chlSab2.chr15 I 23 I 1 s calJac3.chr17 73807136 6 + 74750902 GAGGGA-- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302283 7 - 31377067 GCGGGGT- i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e macFas5.chr2 192382290 584 - 192460366 M e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=685.000000 s hg38.chr3_KI270937v1_alt 32394 4 + 165607 GGGG s ponAbe2.chr3 2348383 4 - 202140232 gggg i ponAbe2.chr3 C 0 I 907 s nomLeu3.chr11 2803058 4 - 123690457 GGGG i nomLeu3.chr11 I 379 C 0 s chlSab2.chr15 91328175 4 + 91754291 ggCG i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73807142 2 + 74750902 GG-- i calJac3.chr17 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e canFam3.chr33 2302290 0 - 31377067 C e papAnu2.chr2 187303421 365 + 187378091 I e macFas5.chr2 192382290 584 - 192460366 M e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=2519.000000 s hg38.chr3_KI270937v1_alt 32398 14 + 165607 TGGTGCGGGCCCGG s nomLeu3.chr11 2803062 14 - 123690457 TGGTGCCGGCCGGG i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91328179 14 + 91754291 GGGTGCGGGCCGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807144 13 + 74750902 TGGTGTGGCCCGG- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302290 5 - 31377067 --------CCCGG- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2348387 907 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e macFas5.chr2 192382290 584 - 192460366 M e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=13270.000000 s hg38.chr3_KI270937v1_alt 32412 38 + 165607 CAGGGCGCGGGTTTGGTGCGGGCCGTGGTGCCGACCTG s nomLeu3.chr11 2803076 38 - 123690457 CAGGGCCCGGATTTGGTGGGGGCCGCGGTGCCGACCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382877 38 - 192460366 CAGGGCGCGGGTTCGGTGGGGGCCGCGGTGCCGACCTG i macFas5.chr2 M 584 C 0 s chlSab2.chr15 91328193 38 + 91754291 CGGGGCGCGGGTTCGGTGGGGGCCGCGGTGCCGACCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807157 36 + 74750902 -CTGGAAGGTGTCTGGCA-GGTCTGCGTGTCGGATCTG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302295 6 - 31377067 ----------------------CCCCGG---------- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2348387 907 - 202140232 I e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=49294.000000 s hg38.chr3_KI270937v1_alt 32450 39 + 165607 GCTTCCTCTCCGCTGCCTCCCGATGCTCCAGGCCAGGAG s ponAbe2.chr3 2349294 39 - 202140232 GCTTCCTCTCCGCTGCCTCCGGATGCTCCAGGCCAGGAG i ponAbe2.chr3 I 907 C 0 s nomLeu3.chr11 2803114 39 - 123690457 GCTTCCTCTCCGCTGCCTCCCGATGCTCCAGGCCAGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382915 39 - 192460366 GCTTCCTCTCCGCGCCCTCCCGATGCTCCAGGCCAGGAG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91328231 39 + 91754291 GCTTCCTCTCCGCGCCCTCCCGATGCTCCAGGCCAGGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807193 38 + 74750902 GTGTCCT-TCAGCTGCCTCCCGGAATTCCAGGCCCAGAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2302301 35 - 31377067 GCTCCCCATCTGTCTCCCCACG----TCCAGGCCGGGAG i canFam3.chr33 C 0 C 0 e mm10.chr16 32768795 351 + 98207768 I e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=382641.000000 s hg38.chr3_KI270937v1_alt 32489 285 + 165607 ACGTTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCTGAGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCGCTCTCCAACATCCTCCACGCCTCCGCCAGCCTCCCGCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGGGCGGCTCGGACCTGCCTCTGAGGCTCCGCGGAGCCAGCCGGAGCTC----GGACCCCCACGCCGGC---GGCCCGGGCAGCCCTGCTCGGCCTCCCTTTCTCCGCCTCCTTGGAGCAGAACCCTTG s ponAbe2.chr3 2349333 284 - 202140232 ACGTCCATTAAAAAGGGAGTCCTCCTGGGCCGCAACGGCTCCGTGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGATCGCG-TCTCCAACATCCTCCACGCCTCCGCCAGCCTCCCGCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGGGCGGCTCGGACCTGCCTCTGAGGCTCCGCGGAGCCAACCGGAGCTC----GGACTCCCACGCCGGC---GGCCCGGGCAGCCCTGCTCGGCCTCCCTTTCTCCACCTCCTTGGAGCAGAACCCTCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2803153 285 - 123690457 ACGTTCAACGCCACCGGAGTCTTCCTGAGCCGCAACGGCTCTGTGGTCTCGGCCAGCTTCGACGGCTGGGCCACCGTCTCGGTGACCGCGCTCTCCAACATCCTCCACGCCTCCGCCAGCCTCCCACCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGGGCGGCTCGGACCTGCCTCTGGGGCTATTCGGAGCCAGCCGGAGCTC----GGACCCCCACGCCCGC---GGCCCGGGCAGCCCTGCTCGGCCTCCCTTTCTCCGCCTCCTTGGAGCAGAACCCTCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192382954 282 - 192460366 ACGGTCAACGCCACCGGAGTCCTCCTGAGCCGCAACGGCTCCGTGGTCTCTGCCAGCTTCGACGGCTGGGCTGCCGTCTCGGTGATCGCGCTCTCCGACATCCTCCACGCCTCCGCCAGCCTCCCGCCCGAGTACCAGAACCGCACGGAGGGGCTCCTGGGTGAGGGCGGCGCGCACCTGCCTCTGAGGCTCTACGGAG----CCGGAGCTC----GGACCCCCACGCCCGCG--GGCCCGGGCAGCCCTGCTCGGCCTCCCTTTCTCCGCCTCCTTGGAGCAGAACCCTCG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91328270 277 + 91754291 ACGGTCAACGCCACCGGAGTCGTCCTGAGCCGCAGCGGCTCCGTGGTCTCTGCCAGCTTCGATGGCTGGGCCGCCGTCTCGGTGGTCGCGCTCTCCGGCATCCTCCACGCCTCCGCCAGCCTCCCGCCCGAGTACCAGGACCGCACGGAGGGGCTCCTGGGTGAG---GGCGCGGACCTGCCTCTGAGGCTCTACGGAG----CCGGAGCTC----GGACCCCCACGCCCGCG--GGCCCGGGCAG--CTGCTCGGCCTCCCTTCCTCCGCCTCCTTGGAGCAGAGCCCTCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807231 257 + 74750902 ACGGTCAGCGCCCCCGGAGTCCTCCTGAGCCACAGCGGCCACGAGGTCTCGGCCAGCTTCGACGGCTCTGCCACGGTCTCGGTGACGGCGCTCTCCAGCATCCTCCACGCCTCCGCCAGCCTCCCGCAGGAGTATTGGAACCTCACCGAGGGCCTCCTGGGTGAGGGCGGCTCAGACCTGCCTCTGTGGCTCTGCGG---CAGCAGGAGGTC----GATTCCCGA----------------------------AGGCTTCCCTTTCCCGGCCTCCTCGGAGCAGAACCCTCG i calJac3.chr17 C 0 C 0 s mm10.chr16 32769146 245 + 98207768 ATATTCAATACCACCGGTGTTCTGCTGACCCAAAATGGCTCCCAAGTCTCAGCCAACTTTGATGGGACAGTGACTATCTCTGTGATTGCTCGCTCCAACATCCTTCATGCCTCCTCCAGCCTATCAGAGGAATATCGAAACCACACAGAGGGCCTTCTGGGTAA----GATGCAGA------GCTCAGACTATACCAAGGCAGCTATCCCTCCTTTGGACTTCCCTGCC-------------------CTGCCCAGTT---CTTCCTCAGTCCCCTA--------------- i mm10.chr16 I 351 C 0 s canFam3.chr33 2302336 229 - 31377067 ACATTCAACAGCACCGGCGTCACGGTGACCCGCGCGGGCTCCGTGGTGTCGGCCGCCTTCGACGGGGCGGTGGCCGTCTCGGTGAGGGCCCTGTCCAACATCCTCCACGCCTCGTGCGGCCTCCCCGCGGAGTACCGGGGGCGCACCGAGGGCCTCCTGGGTGA-----------------------------------------GAAGCTG----GCACCACCCTGCCCGGGGCGGCGGGGACGAGACCTCTCAGCTTCCCTGT------------------GAGCCTTTG i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187303421 365 + 187378091 I e rheMac3.chrUn_JH291127 68859 489 - 111706 M e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=898229.000000 s hg38.chr3_KI270937v1_alt 32774 474 + 165607 GGGCACAGAGCGGGCCGGGAGCCGAGGGGCTTCTCCAGCCTCCCCCGAGGCTCCCTTCCTGTCCTCCGCCCGCTCTAAGGGAGCATCAGGGG-GGGCTGCGGGGAGGCG-----GG-GGGCACAGCCATC-CTTTCTCCCTTTCCTCTTGCCTCCCACA-------------------------------TCC-TCCCGCCCTCCTCCACCGCTGCCCGCGTTTCCT-CCCGCCCCTCCCGAAGGCAGACGGGCAGGGTGTGAGGGCCC-GTCCTCCCGGCTCCCCTGGA------GGCCTGACAGCAGG--TGCAAG-AGCAGAGGCTGCCAGGCCCTGGCCTCTCCCCACTGCGTCCGCCGGATGCTCCCCAGGAAGGGGACAGCCGCGTGCCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCCAGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTTTGGAATG s ponAbe2.chr3 2349617 476 - 202140232 GGGCACAGAGCAGGCCGGGAGCGGAGGGGCTTCTCCAGCCTCCCCCGAGGCTCCCTTCCTGTCCTCCTCCCGCTCTAAGGGAGCATCAGGGGTGGGCTCCGGGGAGGCG-----GG-GGGCACAGCCATC-CTTTCTCCCTTTCCTCTTGCCTCCCACA-------------------------------CCC-TCCCGCCCTCCTCCATCGCTGCCCGCGTTTCCTGCCTCCCCCTCCCGAAGGCAGACGGGCAGGGTGTGAGGGCCC-GTCCTCCCAGCTCCCCTGGA------GGCCGGACAGCAGG--TGCAAG-AGCAGAGGCTGCCAGGCCCTGGCTTCTCCCCACTGCGTCCGCCGGATGCTCCCCAGGAAGGGGACAGCCGCGTGCCCAGGGTGGCCAACCTCCCACT----CTGTCCCTCAGGGGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTATGGAATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2803438 475 - 123690457 GGGCACAGAGCGGGCCGGGAGCCGAGGGGCTTCTCCAGCCTCCCCCGAGGCTCCCTTCCTGTCCTCCTCCCGCTCTAAGGGAGCATCAGGGATGGGCTCCGGGGAGGCG-----GG-GGGCACAGCCATC-CTTTctccctttcctcttgcctcccaca-------------------------------tcc-tcccgccctcctccatcgctgcctgcgtttcct-cccgcccctcccGAAGGCAGACGGGCAGGGTGTGAGGGCCC-GTCCTCCCGGCTCCCCTGGA------GGCCTGACAGCAGG--TGCAGG-AGCAGAGGCTGCCAGGCCCTGGCCTCTCCCCACTGCGTCCTCCGGATGCTCCCCAGGAAGGGGACAGCCGTGTGCCCAGGGTGGCCAACCTCCCACT----CTGTCCTTCAGGGCTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATCCCCCCAGGGAGCCCTGAGGAGATGCTTTTCCACTATGGAATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69356 483 - 111706 GGGCACGGAGCGGGCCGGGAGCGGAGGGGCTTCTCCAGCCGCCACCGAGGCACCCTTTCTGGCCACCTCCCGCTCTAAGGGAGCATCAGGGGTGGGCTCCGGAGAGTCGGGGGCGG-GGTCACAGCCATC-CTTTGGCCCTTTCCTCTTGCCTCCCACA-------------------------------TCC-TCCCGCCCTCTTCCACGGCTGCCCGCG-TTCCT-CCCACCCCTCCGGGAGGCAGCTGGGCAGGGTGTGAGGGCCC-GTCCTCCCGGCTCCCCTGGA------GGCCTGACAGCAGG--TGCGAC-GGCAGAGGCTGCCAGGCCCTGGCCTCTCCCCACTGCGTTCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTGCCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATG i rheMac3.chrUn_JH291127 M 489 C 0 s macFas5.chr2 192383236 483 - 192460366 -GGCACGGAGCGGGCCGGGAGCGGAGGGGCTTCTCCAGCCGCCACCGAGGCACCCTTTCTGGCCACCTCCCGCTCTAAGGGAGCATCAGGGGTGGGCCCCGGAGAGTCGGGGGCGG-GGTCACAGCCATC-CTTTGGCCCTTTCCTCTTGCCTCCCACA-------------------------------TCC-TCCCTCCCTCCTCCATGGCTGCCCGAGTTTCCT-CCCACCCCTCCTGAAGGCAGCCGGGCAGGGTGTGAGGGCCC-GTCCTCCCGGCTCCCCTGGA------GGCCTGACAGCAGG--TGCGAC-GGCAGAGGCTGCCAGGCCCTGGCCTCTCCCCAGGGCGTTCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTGCCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTCCCCCCAGGGAGCTCTGAGGAGACGCTTTTCCACTACGGAATG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91328547 482 + 91754291 GGGCACGGAGCGGGCCGGGAGCGGAGGGGCTTCTCCAGCCGCCACCGAGGCACCCTTTCTGGTCACCTCCCGCTCTAAGGGAGCATCAGGGGCGGGCTCCGGGGAGTCGGGGGCGG-GGTCGCAGCCATC-CTTTGGCCCTTTCCTCTGGCCTCCCACA-------------------------------TCC-TCCCGCCCTCCTCCATGGCTGCCCGCG-TTCCT-CCCACCCCTCCCGGAGGCAGCCGCGCAGGCTGTGAGGGCCC-GTCCTCCCGGCTCCCCTGGA------GGCCTGACAGCAGG--TGCCAC-GACAGAGGCTGCCAGGCCCTGGCCTCT-CCCACTGTGTTCACTGGATGCTCCCCAGGAAGGGGACAGCTGTGTGCCCAGGGTGGCCAACCTCCCACTCTGACTGTCCCTCAGGAGTCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCGTTCCCCCAGGGAGCTCCGAGGAGACGCTTTTCCACTACGGAATG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807488 478 + 74750902 GGGCACGGAGCGGGCCTAGGG--GAGGGACTTCTCCAGCCTCCGATAAGTCTCCCTTCCTGCCCTCCTCCCGCTCTAAGGGAGCATCAGGGGTGTGCTCCAGGGAGGCGGGGGTGGCGGCCGCTGCCGTC-CTTCCT-CCTTTCTTCTTGCCTCCCACA-------------------------------TCCTTCCTGTCCTCCTGTATCTCTGCCAGTGTTTCCC-GCCGACCCTCCCTAA-GCAGAGGGGCAGCGCATGAAGGCCCGGTCCTCCGGGTTCCCCTGGA------GGCCTGACAGCAGG--TGCAAA-GGCAGAGGCTGCCAGGTCCTGGCTGCTCCTCCCTGCATCCCCC-GATGCTCGAGGGGAAGGGGACAGCCGAATGCCCAGCGTGGCCAACCTCCCACT----CTGTCCCTCAGGGATCTGGAATAACAATCCGGAGGACGACTTCAGGATGCCCAATGGCTCCACCATTCCCCCAAGTAGCTCTGAGGCCACGCTTTTCCACTATGGAATG i calJac3.chr17 C 0 C 0 s mm10.chr16 32769391 458 + 98207768 GGGCACAGA--------------GAGGGGCTGCTTCACACACTGTTTAGGCTAATTTCCTGCTTGGCATTT-TTTTAAGGGAATATGAAGGAAATGCTATGGGGAAAGT-----GG-CGGCTCAGCTTTCtccttcctcccctccccttcccttccctacttttcctgtttttagtcttgtctccttccttcc-tcccatcttcccccacattcttcttggctttct-tct--ccttttttAAAGCACAATGGCAGGGTATGAGTGCATGGTCCTCTCCCACCTCCTGGA------A--CCGACCCTAGGCCTGGGAC-AGTTGCAGCTGCC-------------------------CCATTGAATGCCCCCGGGAGAAG--------GTGAGCCTGTGGTATCGAACCTCCTGCT----CTGTCTCACAGGAGTGTGGAATGACAATCCAGAAGATGACTTCAGGATGCCCAATGGCTCCACCATTCCCTCAAACAGCTCTGAGGAGACCCTTTTCTACTATGGAATG i mm10.chr16 C 0 C 0 s canFam3.chr33 2302565 355 - 31377067 ----------------------------GCTTC-----------CTAAAGCTCCGGTTCAGGGCAGC--------CAGGGGGGCTTGGAGGATGGGCTCTGG------------GA-------AGccctc--------------------cctcccgcg-----------------------------------ccccttcttcctccacccccgcctccatttccc-ctc-ttcatccccGGGACAGA-GGGTGGGCTATGAGGTACG-GTCCTCTCTCCTCCCCCGGAAGGACTGGGCCAAGGACAGA--TGCAACTGGAAGGGGTTTCC-----------------------------------CTC--------GGGGGGAGCCACAGTCCCAGGATGGCCAACCTCCTGTT----CTGTCCCTCAGGAGTTTGGAATGGCAATCCAGGAGACGACTTCAGGATGCCCAATGGCTCCAGCATTCCCGGCAATAGCAGCGAGGCCTCACTTTTTCACTACGGAATG i canFam3.chr33 C 0 C 0 e papAnu2.chr2 187303421 365 + 187378091 I e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=47036.000000 s hg38.chr3_KI270937v1_alt 33248 14 + 165607 ACCTGTGAGTCTGG s ponAbe2.chr3 2350093 14 - 202140232 ACCTGTGAGTCTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2803913 14 - 123690457 ACCTGTGAGTCTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69839 14 - 111706 ACCTGTGAGTCTGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192383719 14 - 192460366 ACCTGTGAGTCTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303786 14 + 187378091 aCGTGTGAGTCTGG i papAnu2.chr2 I 365 C 0 s chlSab2.chr15 91329029 14 + 91754291 ACCTGTGAGTCTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807966 14 + 74750902 ACCTGTGAGTCTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32769849 14 + 98207768 ACATGTGAGTCTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2302920 12 - 31377067 ACCTGTGAGTGA-- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=72615.000000 s hg38.chr3_KI270937v1_alt 33262 39 + 165607 GCAGGGTCCTGGGGCAG-AGGGGCAGGTGAG---GGGAGCCGG s nomLeu3.chr11 2803927 39 - 123690457 GCAGGGTCCTGGGGCAG-AGGGGCAGGTGAG---GGGAGCCGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69853 40 - 111706 GCAGGGTCTCGGGGCAGAAGGGGCAGGTAAG---GAGAGCCAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192383733 40 - 192460366 GCAGGGTCTCGGGGCAGAAGGGGCAGGTAAG---GAGAGCCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303800 40 + 187378091 GCAGGGTCTTGGGGCAGAAGGGGCAGGTAAG---GAGAGCCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329043 40 + 91754291 GCAGGGTCTTGGGGCAGAAGGCGCAGGTAAG---GAGAGCCAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73807980 40 + 74750902 GCAGAGTCCTGGGGCAGATAGGGCAGATGGG---GCAGGCCAG i calJac3.chr17 C 0 I 15 s mm10.chr16 32769863 40 + 98207768 ---GGGTCCTCAGGCCACTGGGGCAGGTCAGTGAGGGAGCTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2302932 40 - 31377067 GGAGGGCTTGAGGGTCCTCGGGGCAGGTGCG---GCTGGGCGG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2350107 0 - 202140232 C e panTro4.chr3_GL389630_random 5254 2340 - 103936 I a score=179991.000000 s hg38.chr3_KI270937v1_alt 33301 71 + 165607 TATGTTTAT-GTCGTCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTGT- s panTro4.chr3_GL389630_random 7594 71 - 103936 TATGTTTAT-GTCGTCCCCCTCGGCCCTGTGGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGAGGAATCTGT- i panTro4.chr3_GL389630_random I 2340 C 0 s nomLeu3.chr11 2803966 71 - 123690457 TATGTTTAT-GTCGTCCCCCTCGGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCTGATGAATCTGT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69893 71 - 111706 TGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTGT- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192383773 71 - 192460366 TGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTGT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303840 71 + 187378091 TGTGTTTAG-GTCGTCCCCCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTAAGG--------------------------TCCGAGGAATCTGT- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329083 71 + 91754291 TGTGTTTAG-GTCGTCCCGCTCAGCCCTGTAGGAAGCAGACCTCCATCCTCCCTGAGG--------------------------TCTGGGGAATCTGT- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73808035 68 + 74750902 TATGTTTAT-GTCGTCTCCCTCGGGCCTGTAGGAAGCAGA---CCATCCTTCGTAAGG--------------------------TCTGAGGAATCTAT- i calJac3.chr17 I 15 C 0 s mm10.chr16 32769903 62 + 98207768 ------TGT-GTTGTCTCCCTTATGCTTGTAGGATCT---TATGCATCCTTGGGAAGG--------------------------TCTGAAGACCTTGC- i mm10.chr16 C 0 I 1 s canFam3.chr33 2302972 98 - 31377067 GATGGAAAGCGTCGTGTCCCTCAGGCCTGTGGGA-CCGGACCTCCATCCTTTGTGAGGGAGGAGTGGAAAGGCCAGGAGGAAGTGCTGAGGATTCTGGT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2350107 0 - 202140232 C a score=26992.000000 s hg38.chr3_KI270937v1_alt 33372 8 + 165607 GCCCCCCC s panTro4.chr3_GL389630_random 7665 8 - 103936 GCCCCCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350107 8 - 202140232 GCCCCCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2804037 8 - 123690457 GCCCCCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69964 8 - 111706 GCCCCCCC i rheMac3.chrUn_JH291127 C 0 I 10 s macFas5.chr2 192383844 8 - 192460366 GCCCCCCC i macFas5.chr2 C 0 I 10 s papAnu2.chr2 187303911 8 + 187378091 Gccccccc i papAnu2.chr2 C 0 I 10 s chlSab2.chr15 91329154 8 + 91754291 GCCCCCCC i chlSab2.chr15 C 0 I 9 s calJac3.chr17 73808103 8 + 74750902 GCTATCCT i calJac3.chr17 C 0 C 0 s mm10.chr16 32769966 8 + 98207768 ACTGTCCC i mm10.chr16 I 1 C 0 s canFam3.chr33 2303070 8 - 31377067 GCGGTCCC i canFam3.chr33 C 0 C 0 a score=29625.000000 s hg38.chr3_KI270937v1_alt 33380 14 + 165607 AGGGCTGTCCCCAC s panTro4.chr3_GL389630_random 7673 14 - 103936 AGGGCTGTCCCCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350115 14 - 202140232 AGGACTGTCCCCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2804045 14 - 123690457 AGGGCTGTCCCCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 69982 13 - 111706 AGGACTGTCCCCT- i rheMac3.chrUn_JH291127 I 10 C 0 s macFas5.chr2 192383862 13 - 192460366 AGGACTGTCCCCC- i macFas5.chr2 I 10 C 0 s papAnu2.chr2 187303929 13 + 187378091 aggactgtccccc- i papAnu2.chr2 I 10 C 0 s calJac3.chr17 73808111 14 + 74750902 AGGTCTGTCCCCTC i calJac3.chr17 C 0 C 0 s mm10.chr16 32769974 12 + 98207768 ATGTCTGTCCCC-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2303078 13 - 31377067 AGACTTGTCCCCC- i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91329162 9 + 91754291 I a score=2090867.000000 s hg38.chr3_KI270937v1_alt 33394 691 + 165607 CACCACCAGCCCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGGAGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCTGGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAAGCCATCTAAAGTGAGGGGTAGAGGTGGACACAGATGGAATAAGGCTGA-GTGCCATGCCTGGT------ACCACCGCGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGATAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGCGAACGCCACCCTCAGTAAGTGGCCCGAG----GC---CTGGGGAGGCCTTTTCAGAG-TCGGG-AGCAGATGAGGAGCTGCCCTTGCCTGACCCTGCTTTTCCCTGTGCATCTGCATTCACTGAGCAGATTCTTCCACTCCTGGCATTCCTCTGCTCAAACCCTTCAGAGACTTCCCTGGCTCTCTCCATCCTTGCAGTGGCCTTCGGCCCAGTTCA-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACGCCTTCCC s panTro4.chr3_GL389630_random 7687 691 - 103936 CACCACCAGCCCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGGGGACGTGGAGTGTCCTCTCTCACTGCAGCAGGTGTTTCTAGACTCAGAAGCTGGAAACCGCTCTGGCCCTGC--ACTCCCA--CCAC-CC-----TGCTCCAAGCCATATAAAGTGAGGGGTAGAGGTGGACACAGATGGAATAAGGTTGA-GTGCCATGCCTGGT------ACCACCACGCTCTGTGTGTTACAGGGCAGATCAATGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGCAAAAAAACAGCTCCTGGGCTGAACATTTGATCTCCAA-CTGTGACGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGAAGTCAGTAAAAACTACGAGCAGGCGAACGCCACCCTCAGTAAGTGGCCCGAG----GC---CCGGGAAGGCCTTTTCAGAG-TCGGG-AGCAGATGAGGAGTTGCCCTTGCCTGACCCTGCTTTTCCCTGTGCACCTGCATTCACGGAGCAGATTCTTCCACTCCTGGCATTCCTCTGCTCAAACCCTTCAGAGACTTTCCTGGCTCTCTCCATCCTTGCAGTGGCCTTCGGCCCAGTTCA-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACGCCTTCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350129 691 - 202140232 CACCACCAGCCCACCTGCCTCTCTCGACCTGGAGGAGAGAATGGGGGATGTGGAGTGTCCTCTCTCCCTGCAGCAGGCATTTCCAGACTCAGAAGCTGGAAACCGCTCTGGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAAGCCATATAAAGTGAGGGGTAGAGGTGGACACAAATGGAATAAGGCTGA-GTGCCATGCCTGGT------GCCATCGCGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGCAAAAAAACAGCTCCTGGGCTGAAGATTTGATCTCCAG-CTGTGACAGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACGTCACACGAGGGAAGTCAGTAAAAAATACGAGCAGGTGAACGCCACCCTCAGTAAGTGGCCCGAG----GC---CCCGGGGGGCCTTTTCAGAG-TCGGG-AGCAGATGAGGAGCTGCCCTTGCCTGGCCCTGCTTTTCCCTGTGCATCTGCTTTCACTGAGCAGATTCTTTCGCTCCTGTTATTCCTCTGCCCAAACCCTTCAGTGACTTTCCCGGCTCTCTCCATCCTTGCAGTGGCCTTCGGCCCAGTTCA-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACGCCTTCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2804059 672 - 123690457 --CCACCAGCCCACCTGCCTCTCTCTACCTGGAGGAGAGAATGGAGGACGTGGAGTGTCCTCTCTCACTGCAGCAGG----------CTCAGAAGCTGGAAACCGCTCTGGCCCTGC--ACTCCCA--CCGC-CC-----CACCCCAAGCCATATAAAGTGAGGGGTAGAGGCGGACACAGGTGGAATAAGGCTGA-GTGCCACGCCTGGT------ACCATCGTGCTCTGTGTGTTACAGGGCAGATCAACGGCACAGGCCTCCTTGGCAATAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGCAAAAAAACAGCTCCTGGGCTGAAGCTTTGAT-------CTGTGACGGAGACAGCTCATGCATCTATGACACTCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCAGTCAGTAAAACCTACGAGCAGGTGAATGCCACCATCAGTAAGTGGCCCGAG----GC---CCCGGGAGGGCTTTTCAGAC-TTGGG-AGCAGATGAGGAGCTGCCCTTGCCTGACTCTGCTTTACCCTGTATATCTGCATTCACTGAGCAGATTCTTCCACTCCTGTTATTCCTCTGCTCAGACCCTTCAGTGACTTCCCTGGCTGTCT-CATCCTTGCAGTGGCCTTTGGCCTGGTTCA-------------GCTTCTCAGAGTTCTTCTCCTAGTGCTGGACCCCTTCCC i nomLeu3.chr11 C 0 I 6469 s rheMac3.chrUn_JH291127 69995 687 - 111706 CAGGACCAGTGCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCGAGCGTCCTCTCTCACCGCAGCAGGCGTTTCCAGACTCAGAAGCTAGTAACCGCTGTTGCCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCTGA-GTGCCATGCCCGGT------ACCATCACGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACACAAGCATCGGACTTCACACGAGGGCCGTCAGCAAAACCTACAAGCAGGTGAACGCCACCCTCAGTAAGTGGCCCGAG----CC---CCTGGGAGGCCTTTTCAGAG--CAGA-AGCAGATGAGGAGCTGCCCTTCCCTGACCCTGCTTTACCCTGTGCATCTGCATTCACTGAACAGATTCTTTTGCTCCTGTTATTCCTCTGCTCAGACCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGGGGCCTTTGGCCCAGTTCG-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACCCCTTCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192383875 687 - 192460366 CAGGACCAGTGCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCGAGCGTCCTCTCTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGTCGCCCTGC--ACTCCCA--CCGC-CC-----TGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCTGA-GTGCCATGCCCGGT------ACCATCACGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTTCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGC---AAAACAGCTCCTGGGCTGAAGATGTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCATCAGCAAAACCTACAAGCAGGTGAATGCCACCCTCAGTAAGTGGCCCAAG----CC---CCTGGGAGGCCTTTTCAGAG--AAGA-AGCAGATGAGGAGCTGCCCTTCCCTGACCCTGCTTTACCCTGTGCATCTGCATTCACTGAACAGATTCTTTTGCtcctgttattcctctgctcagaccctccagtggcttcccCCGCTCTCTCCATCCTAGCAGGGGCCTTTGGCCCGGTTCA-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACCCCTTCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187303942 688 + 187378091 cAGGACCAGTGCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCGAGCGTCCTCTCTCACCGCAGCAGACGTTTCCAGACTCAGAAGCTAGAAACCGCTGTCACCCTGC--ACTCCCA--CCGC-CC-----CGCTCCAGGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCTGA-GTGCCATGCCCGGT------ACCATCACGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGC---AAAACAGCTCCTGGGCTGAAGATATGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCTGTCAGCAAAACCTACAAGCAGGTGAACGCCACCCTCAGTAAGTGGCCCGAG----CC---CCGGGGAGGCCTTTTCAGAG-TCAGA-AGCAGATGAGGAGCTGCCCTTCCCTGACCCTGCTTCACCCTGTGCATCTGCATTCACTGAACAGATTCTTTTGCTCCTGTTATTCCTCTGCTCAgaccctccagtggcttccccCGCTGTCTCCATCTTAGCAGTGGCCTTTGGCCCGGTTCG-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGaccccttccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329171 689 + 91754291 CAGGACCAGCGCACCTGCCTTTCTCTAGCTGGAGGAGAGAATGGGGTAGGTCGAGTGTCCTCTGTCACTGCAGCAGGCGTTTCCAGACTCAGAAGCTAGAAACCGCTGTGGCCCTGC--ACTCCCA---CGG-CC-----TGCTCCAAGCCACATAAAGTGAGGGGTAGGGGTGGACACAGAAGGAATAAGGCTGA-GTGCCATGCCCGGT------ACCATCACGCTCTGTGTGTTACAGGGCAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCTTCCAACTTCACCCCTGTTTTCTACTCACAACTGCAAAAAAACAGCTCATGGGCTGAAGATTTGATCTCCAG-CTGTAATGGAGACAGCTCATGCATCTATGACACCCTGGCCCTGCGCAACGCAAGCATCGGACTTCACACGAGGGCCGTCAGCAAAACCTACAAGCAGGTGAACGCCACCCTCAGTAAGTGGCCTGAG----CC---CCCGGGAGGCCTTTTCAGAG--CAGA-AGCAGATGAGGAGCTGCCCTTCCCTGACCCTGCTTTACCCTGTGCATCTGCATTCACTGAAGAGATTCTTTTGCTCCTGTTATTCCTCTGCTCAGACCCTCCAGTGGCTTCCCCCGCTCTCTCCATCCTAGCAGTGGCCTTTGGCCTGGTTCA-------------GCTTCTCAGAGCTCTTCTCCTAGTGCTGGACCCCTTCCC i chlSab2.chr15 I 9 C 0 s calJac3.chr17 73808125 668 + 74750902 CACTGCCATCCCACCTG--TATCTCTACCTGGAGGAGAGAA-GGGCGGGGTGGAGGGTCCTC--TCATTGCAGCATGCGTTTCCAGACTC--AAGCTGGAAACTGCTCTGGCTCTGC--ACTCCCA--CAGC-CC-----CCC------------AAAGTGAGGGGTAGGGGTGGACACAGACAACATGAGGCTGA-GTG-CACACCTGATA-CACGACCATAGAGCCCTGTGTGTTACAGGGGAGATCAACGGGACAGGCCTCCTTGGCAAGAGGAATGACCAGCTGCCCTCCAACTTCACCCCTGTTTTCTATGACCAACTGCGAACAAACAGCTCCTCGGATCAAGATTTGATCTCCAGCCTGCAACGGAGATAGATCCTGCATCTATGACGCCCTGGCCACGCGCAACACAAGCATTGGACATCACACGCTGGCGCTCCATAAAA-CTACGAGCGGGTGAACGCCACCTTCAGTAAGTGGCCCAAC----GC---CCCAGGAGGCCTTTTCAGAG-CTGGG-AGCTG-TGAGGAGCAG-CCTTCCGTGACCCTGCTGGACCCTGCGCAACTGCATTCAcggagcagattc--------------ttcctctgctcaaatcctccactgacttccc-ggctctctccatccttaccgtggccttaggcct-gttcagtctggtcccgccgcttcttagaggtcttctc---atgctatacccgctccc i calJac3.chr17 C 0 C 0 s mm10.chr16 32769986 572 + 98207768 TGCTCCCACCCTAGCTGCACGTCTCTTCC---AGGAAAGGAGGAAAGGAGTGGGTGGTCTTCACTCACTGAAGCAGGGATTTCCAGACTCTGAAATTA-------TCCTGTTCCTACCAGCTCCCAGGCCAC-CCCCTTACGCACAAAACCATATACA--GAGAGCTAGGGGTGGGCACAAGTGAAATATGACTGGTGTCTTATACC----------ACCCTCGTACCTCCTGTGTTACAGGGCACGTCAACGGAACAGGCCTCCTTGGGATAAGGGCAGACCCGCTGCCTACCAAGTTCACCCCCATCTTTCTGTCTCAACTGTTGAATCAGAGTGCCTCAGGTGAAGACTTGGCCTCTGG-GTGCAAAGGCGACAGAAAGTGCATGTTTGACATCCTGGCCACGGGAAACAGAACTATTGGACAAAGCACCAATTCCATCCTTAATGAGTTCCAACATATGAATGACACCCTCAGTAAGTGACACGAG----GAAGGTCGGGGAGACCTTTCCAGAGATGGGG-AGCAGGCAAGGA-------------------------------------------------------CCCCCATTCATGGCATTCC----CTCAAGCTCCACG----------------TCTTTATTCCTTTAGTG------------GGTCA-------------AATCC------------------------------TCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2303091 594 - 31377067 GACTCCCATCCCATCTGCGCTTCTCTACCTGGAAGAGGAGACAAGGGCAGGGGTG-GCTCTCACTGACCAGAGTAGGCATTTCCGGCCTCAGAAGCCAGAAGTCACTCCAGCCCTCC--GCATCTG--CCTCGCT-----CACCCCCAGGCACATAAAGTGAGGGGAGGGAGTAGA---------------GCTGG-AGACCATCCCTGGTGCCACCGCCATTGCATCCTGTGTCTTACAGGGAAAACCAATGATACGGGACTCCTTGGCGAGAGAGGTGACCATCCGCCTTCCAACTTCACCCCCGATTTCCTTACCAGCCTGCAGAAAAATAAAACCTTAAATGAAATGCTGCTCTCCAA-GTGTCATGAAGATGAGCGGTGCATCTATGACAGCCTGGCCACAGGAAACACAGACACGGGCCTGAACACCAGGATGCTCTTCGCAAGTCAGCAGCGGATGAACGCCACCCTCAGTAAGTGGCGTGCGTCGCGC---GCGGGGAGACGTTTGCAGAG-TTAGGTGGCAGATTAGGAGCC-CCCCTCCCGCCCCACCCTTTTCACGATATTCCTTTAAAAATTTAACAGATTCTTTTGCTCAGGTTGTTCCT---CCCATGACTCCCA------------------------------------------------------------------------------------------------------ i canFam3.chr33 C 0 C 0 a score=15642.000000 s hg38.chr3_KI270937v1_alt 34085 7 + 165607 AGCCCCC s panTro4.chr3_GL389630_random 8378 7 - 103936 AGCCCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350820 7 - 202140232 AGCCTCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2811200 7 - 123690457 AGCCCCC i nomLeu3.chr11 I 6469 C 0 s rheMac3.chrUn_JH291127 70682 7 - 111706 AGCTCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192384562 2 - 192460366 AG----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187304630 7 + 187378091 acctccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329860 7 + 91754291 AGCTCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73808793 7 + 74750902 tgctccc i calJac3.chr17 C 0 C 0 s mm10.chr16 32770558 7 + 98207768 AGCTCCC i mm10.chr16 C 0 I 35 s canFam3.chr33 2303685 7 - 31377067 GGCTCAC i canFam3.chr33 C 0 C 0 a score=3276.000000 s hg38.chr3_KI270937v1_alt 34092 1 + 165607 T s panTro4.chr3_GL389630_random 8385 1 - 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350827 1 - 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2811207 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 70689 1 - 111706 T i rheMac3.chrUn_JH291127 C 0 I 48 s papAnu2.chr2 187304637 1 + 187378091 t i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329867 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73808800 1 + 74750902 t i calJac3.chr17 C 0 C 0 s canFam3.chr33 2303692 1 - 31377067 T i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e macFas5.chr2 192384564 0 - 192460366 C a score=4683.000000 s hg38.chr3_KI270937v1_alt 34093 2 + 165607 CC s panTro4.chr3_GL389630_random 8386 2 - 103936 CC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350828 2 - 202140232 CC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2811208 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187304638 2 + 187378091 cc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329868 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73808801 2 + 74750902 cc i calJac3.chr17 C 0 I 452 s canFam3.chr33 2303693 2 - 31377067 CT i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e macFas5.chr2 192384564 0 - 192460366 C e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=700.000000 s hg38.chr3_KI270937v1_alt 34095 1 + 165607 G s panTro4.chr3_GL389630_random 8388 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2350830 1 - 202140232 A i ponAbe2.chr3 C 0 I 267 s nomLeu3.chr11 2811210 1 - 123690457 A i nomLeu3.chr11 C 0 I 1408 s papAnu2.chr2 187304640 1 + 187378091 a i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 91329870 1 + 91754291 A i chlSab2.chr15 C 0 I 1 s canFam3.chr33 2303695 1 - 31377067 G i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e macFas5.chr2 192384564 0 - 192460366 C e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=5792.000000 s hg38.chr3_KI270937v1_alt 34096 11 + 165607 TCCATCCTAGC s panTro4.chr3_GL389630_random 8389 11 - 103936 TCCATCCTAGC i panTro4.chr3_GL389630_random C 0 I 153 s ponAbe2.chr3 2351098 11 - 202140232 TCCATCCTAGT i ponAbe2.chr3 I 267 C 0 s nomLeu3.chr11 2812619 11 - 123690457 TCCATCCTAGT i nomLeu3.chr11 I 1408 C 0 s papAnu2.chr2 187304642 11 + 187378091 TCCATCCTACT i papAnu2.chr2 I 1 I 45 s canFam3.chr33 2303696 1 - 31377067 -------T--- i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e chlSab2.chr15 91329871 1 + 91754291 I e macFas5.chr2 192384564 0 - 192460366 C e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=31661.000000 s hg38.chr3_KI270937v1_alt 34107 74 + 165607 GCTGGATGCCTTCCCAGCCCCCTTCACTCCATAC---------------------------------------TAGCGCTGGA-CGCCTTCCCAGCCCCCTCCACTCCATCCTA s panTro4.chr3_GL389630_random 8553 74 - 103936 GCTGGACGCCTTCCCAGCCCCCTCCACTCCATCC---------------------------------------TAGTGCTGGA-CGCCTTCCCAGCCCCCTCCACTCCATCCTA i panTro4.chr3_GL389630_random I 153 C 0 s ponAbe2.chr3 2351109 74 - 202140232 GCTGGACGCCTTCCCAGCCCCCTCCACTCCATCC---------------------------------------TAGTGCTGGA-CGCCTTCCCAGCCCCCTGCACTCCATCCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2812630 74 - 123690457 GCTGGACCCCTTCCCAGCCCCCTCCACTCCATCC---------------------------------------TAGTGCTGGA-CCCCTTCCCAGCTCCCTCCACTCCATCCTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192384564 39 - 192460366 -----------------CTCCCTGCACTCCAGCCCGCTCAGTCTGCCCCCCG------------------------------------------------------CCAT---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187304698 114 + 187378091 GCTGGACCCCTTCCCAGCTCCCTGCACTCTAGCCCGCTCAGTCTGCCCCCCGCATTTCTCAGAGCTCTTCTCCTAGTGCTGGacccccttcccacctccctccacTCCATCCTa i papAnu2.chr2 I 45 I 135 s canFam3.chr33 2303697 24 - 31377067 ---GATGACATTCACAGCCCTTTCCAA--------------------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e chlSab2.chr15 91329871 1 + 91754291 I e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=13313.000000 s hg38.chr3_KI270937v1_alt 34181 28 + 165607 GCGCTGGACCCCTTCCCAGCCCCCTCCA s panTro4.chr3_GL389630_random 8627 28 - 103936 GCGCTGGACGCCTTCCCAGCTCCCTCCA i panTro4.chr3_GL389630_random C 0 I 337 s ponAbe2.chr3 2351183 28 - 202140232 GTGCTGGACCCCTTCCCAGCCCCCTCCA i ponAbe2.chr3 C 0 I 1 s nomLeu3.chr11 2812704 28 - 123690457 GTGCTGGACCCCTTCCCAGCTCCCTGCA i nomLeu3.chr11 C 0 I 1 s macFas5.chr2 192384603 15 - 192460366 ------------TTCTCAGAGCTCTTC- i macFas5.chr2 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2303721 0 - 31377067 C e chlSab2.chr15 91329871 1 + 91754291 I e papAnu2.chr2 187304812 135 + 187378091 I e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=3820.000000 s hg38.chr3_KI270937v1_alt 34209 4 + 165607 TCCA s panTro4.chr3_GL389630_random 8992 4 - 103936 TCCA i panTro4.chr3_GL389630_random I 337 C 0 s ponAbe2.chr3 2351212 4 - 202140232 TCCA i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 2812733 4 - 123690457 TCCA i nomLeu3.chr11 I 1 C 0 s chlSab2.chr15 91329872 4 + 91754291 TCCA i chlSab2.chr15 I 1 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2303721 0 - 31377067 C e papAnu2.chr2 187304812 135 + 187378091 I e macFas5.chr2 192384618 0 - 192460366 C e rheMac3.chrUn_JH291127 70690 48 - 111706 I a score=36853.000000 s hg38.chr3_KI270937v1_alt 34213 15 + 165607 TCCTAGCGCTGGATG s panTro4.chr3_GL389630_random 8996 15 - 103936 TCCTAGTGCTGGACG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2351216 15 - 202140232 TCCTAGTGCTGGACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2812737 15 - 123690457 TCCTAGTGCTGGACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 70738 15 - 111706 TCCTAGTGctggacc i rheMac3.chrUn_JH291127 I 48 C 0 s macFas5.chr2 192384618 15 - 192460366 TCCTAGTGCTGgacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187304947 15 + 187378091 TCCTAGTGCTGGacc i papAnu2.chr2 I 135 C 0 s chlSab2.chr15 91329876 15 + 91754291 TCCTAGTGCTGGACC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2303721 14 - 31377067 -CCTGAccccagaag i canFam3.chr33 C 0 C 0 e mm10.chr16 32770565 35 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I a score=127903.000000 s hg38.chr3_KI270937v1_alt 34228 53 + 165607 CCTTCCCAGCcccctccactccatcctagcgctggaccccttcccagctccct s panTro4.chr3_GL389630_random 9011 53 - 103936 CCTTCCCAGCCCCCTCCACTCCATCCTAGTGCTGGACGCCTTCCCAGCCCCCT i panTro4.chr3_GL389630_random C 0 I 792 s ponAbe2.chr3 2351231 53 - 202140232 CCTTCCCAGCCCCCTCCACTCAATCCTAGTGCTGGACGActtcccagccccct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2812752 53 - 123690457 CCTTCCCAGCTCCCTGCACTCCATCCTGGTGTTGGAccccttcccagctccct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 70753 53 - 111706 ccttcccagctccctgcactccatcctactgctggaccccttcccacctccct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192384633 53 - 192460366 ccttcccagctccctgcactccatcctactgctggacgccttcccacctccct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187304962 53 + 187378091 ccttcccacctccctccactccatcctactgctggaccccttcccacctccct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329891 53 + 91754291 CTTTCCCAGCTCCCTCCACTCCATCCTAGTGCTGGaccccttcccagctccct i chlSab2.chr15 C 0 C 0 s mm10.chr16 32770600 45 + 98207768 CCTTCACTGCCCTATGCACTC--TGCCACTAC----CCCCTTCTCCTCCCC-- i mm10.chr16 I 35 C 0 s canFam3.chr33 2303735 40 - 31377067 -ctctccaactctc-cctctccttc-----------tccctgccctgctccct i canFam3.chr33 C 0 C 0 e calJac3.chr17 73808803 452 + 74750902 I a score=1035046.000000 s hg38.chr3_KI270937v1_alt 34281 508 + 165607 gcactccagccccgcaggctcctctgtgttcttcaaacacgctag----gtgcgctcagctc-ccaggcttcacacgtgctgttctcttgcctggaatacc-cttccttccctggacagccacacgcttgcccctcaccttctttacgtcttcattc---caatgtcccctccttggtgaggcctctcttggccgccctgtctaaaatgtcacattcacccacacttcatgtttgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-aattattcattcatgactgtatcctcaccacccagaacagtgccagccactta------gctcaataaatgtttgttaaatgactgaCTGAATGAATGTGTGAAGCAactatgaaatggaaatggcagggctccgagaaacagacccgtgaagaggtttcactccctctctatttctggacaaatgcaatgtccctttagatgtgacccTC s ponAbe2.chr3 2351284 508 - 202140232 ccactccagccccgcaggctcctctgtgttcttcaaacacgccag----gtgtgctcagctc-ccaggcttcacacatgctgttctcttgcctggaatacc-cttccttccccggacagccacacgcttgcccctcacctcctttacgtcttcattc---caatgaaccctcctcggcgaagcctctcttggccgccctgtctaaaatgtcacattcacccacacttcgtgtttgccttctctgctttatttttttctccttagcatttataattactcaa-------cctattttataattttcacaggtatcttttt-tattattcattcatgactgtatcctcaccacccagaacagtgccagccactta------gctcaataaatatttgttaaatgactgaCTGAACGAATGCGTGAAGCAactatgaaatggaaatggcagggctccgagaaacagacccgtgaagaggtttcactccctctctatttctggacaaatgtaatgtccgtttagatgtgacccTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2812805 504 - 123690457 acactccagccctgtaggctcctctgtgttcttcagacacaccag----gtgtgctcagctc-ccaggcttcacacgtgctgttctcttgcctggaatacc-cttcattccctggacagccacacgcttgcccctcacctcctttatgtcttcattc---caatgtcccctccttggcaatgcctttcttggccaccctgtccaaaatgtcacattcacccacacttcctgtttgccttccctgc----cttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattattcattcatgactgtatcctcatcacccagaacagtgccagccactta------gctcaataaatatttgttaaatgactgaCTGAATGAATGCGTGACGCAactatgaaatggaaatggcagggctccgagaaacagacccgtggagaggtttcactccctctctatttctggacaaatgcaatatccgtttagatgtgatcctc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 70806 511 - 111706 ccactccagccccgcaggctcctctgtgttcctcaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacgtgctgttctcttgcct-gaatgccttttccttccctggacagccacacgcttgcccctcacctcctttatgtctttattc---caat-tcccctcctcagcaagggctctcttggccgccctgtctaaaatggcacattcacccacacttcctgtttgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattattcattcatgactgtatcctcactacccagagcaatgccagccactta------gctcaataaatatttgttaaatgaCAGATTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccgagaaacagccccgtgaaaaggtttcactccctctctatttctggacaaatgtgatgtgcgtttcgatgtgactctc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192384686 508 - 192460366 ccactccagccccgcaggctcctctgtgttcctcaaacacaccaggcatgtgcgctcagctc-ccaggcttcacacatgctgttctcttgcct-gaatgcc-tttccttccctggacagccacacgcttgcccctcacctcctttatgtctttattc---cagt-tcccctcctcagcgagggctctcttggccgccctgtctaaaatggcacattcacccacacttcctgtttgcctttccttctttatttttttctccttagcatttataattactcaa-------c--attttataattttcacaggtatcttttt-tattattcattcatgactgtatcctcactacccagagcaatgccagccactta------gctcaataaatatttgttaaatgaCAGATTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccgagaaacagccccgtgaaaaggtttcactccctctctatttctggacaaatgtgatgtgcgtttcgatgtgactctc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187305015 511 + 187378091 ccactccagccccGCAGGGTCCTCTGTGTTCCCCAAACACACCAGGCATGTGCGCTCAGCTC-CCAGGCTTCACACGTGCTGTTCTCTTGCCT-GAATGCC-TTTCCTTCCCTGGACAGCCACATACTTGCCCCTCACCTTCTTTATGTCTTTATTC---CAATGTCCCCTCCTCAGCGAGGGCTCTCTTGGCCGCCCTGTCTAAAATGGCACATTCACCCACACTTCCTGTTTgccttccctgctttatttttttctccttagcattTATAATTACtcaa-------catattttataattttcacaggtatcttttt-tattattcattcatgaCTGTATCCTCACTACCCAGAGCAATGCCAGCCACtta------gctcaataaatatttgttaaatgacagATTGAATGGATGTGTGAACCAACTATGAAATGGAAATGGCAGGGCTCCGAGAAACAGACCTGTGAAAAGGTTtcactccctctctctttctggaCAAATGTGATGTGCGTTTCGATGTGACCCtc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91329944 512 + 91754291 ccactctagcccggcaggctcctctgtgttcctcaaacacaccaggcatgcgcgctcagctc-ccaggcttcacacgtgctgttctcttgcctagaatgcc-tttccttccctggacagcaacacgcttgcccctcacctcctttatgtctttattc---caatgtcccctcctcagtgagggctctctgggctgccctgtctaaaatggcacattcacccacacttcctgtttgccttccctgctttatttttttctccttagcatttataattactcaa-------catattttataattttcacaggtatcttttt-tattattcattcatgactgtatccttactacccagagcaatgccagccactta------gctcaataaatatttgttaaatgactgaCTGAATGGATGTGTGAACCAACTatgaaatggaaatggcagggctccaagaaacagaccagtgaaaaggtttcactccctctctatttctggacaaatgtgatgtccgtttagatgtgaccctc i chlSab2.chr15 C 0 C 0 s mm10.chr16 32770645 412 + 98207768 TCCCTCCA----------CTCCACTGGCTTCTTTGGGCTCACTGG--------------------AAACTCTGCATGTGCCTTTCTCTTAC----AAGGCT-CT---CTCCACAGCCAGCCACAGGCAGGTCAC-------------------------------TGCCTTCTTAAGC-------CCCCAGACTGCCATGTCTTTTATTTCACGTTTATTCACACCC--------CCTTTCCTGATTTTTTTTTT-----TTAGCATTTCTAACTAGTAAGAGCATCTTATAATTTATAATTCCCTTAAGCCTCTTTTTCTATCACTTGTTCATTGCTATAG-----------AGATTAGGGCCATCTGTATATCACATGCTCAATACATCT--------------ATTGATGAAACTTAttaatatgcaatgggatggaaataataggcttccaagatacggagctttgagagagcttgac-----ctctctttctgggaagatggaatgtccatctacataccacactc i mm10.chr16 C 0 C 0 s canFam3.chr33 2303775 474 - 31377067 ccactccagccctcctggcttctccgtgttcaccaaccacagcgg----gctcgctcctcactccaggctccatccatggccctctctgccct--gacacc-cttcct---ccaggcagccccaggctcacc-ctctcctcctccaaggctgcgtgcaagcagagtcgcctcctccgcaatgcccttcttggccggcctgccc-aaatctcacatttacccatacttcctatttgccgtccctgctttgtttttttctcctcagcatttataactatctag-------catatttcctagtttccataggtatccttct-cagtact-gtttactgctgtgtcctcactacctagagccctaccagccatacggtaggcgctcagtgcgtgt--gttcagcgactgaCCGAATGACTG--------AACAGGGAAATGGAAATTGCATG--TCCA----------CCGTG-------TTc-------ctctatttcctggcaaatgcaatgcccatctggagatcaccctc i canFam3.chr33 C 0 C 0 e calJac3.chr17 73808803 452 + 74750902 I e panTro4.chr3_GL389630_random 9064 792 - 103936 I a score=16691.000000 s hg38.chr3_KI270937v1_alt 34789 14 + 165607 CAGGTTTtgtgcgt s ponAbe2.chr3 2351792 14 - 202140232 CAGGTTTtgtgtgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813309 14 - 123690457 catgttttggtttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71317 14 - 111706 caggtttttttcgt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192385194 14 - 192460366 caggtttttttcgt i macFas5.chr2 C 0 I 31 s papAnu2.chr2 187305526 14 + 187378091 caggtttttttctt i papAnu2.chr2 C 0 I 32 s chlSab2.chr15 91330456 14 + 91754291 caggTTTTtttctt i chlSab2.chr15 C 0 I 32 s mm10.chr16 32771057 14 + 98207768 atgggtttcagctt i mm10.chr16 C 0 I 105 e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C e panTro4.chr3_GL389630_random 9064 792 - 103936 I a score=-799.000000 s hg38.chr3_KI270937v1_alt 34803 3 + 165607 gtg- s ponAbe2.chr3 2351806 3 - 202140232 gtg- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813323 3 - 123690457 gtt- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71331 3 - 111706 -ttt i rheMac3.chrUn_JH291127 C 0 I 27 e mm10.chr16 32771071 105 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C e chlSab2.chr15 91330470 32 + 91754291 I e papAnu2.chr2 187305540 32 + 187378091 I e macFas5.chr2 192385208 31 - 192460366 I e panTro4.chr3_GL389630_random 9064 792 - 103936 I a score=-855.000000 s hg38.chr3_KI270937v1_alt 34806 10 + 165607 tgtgtgtgtg------------- s ponAbe2.chr3 2351809 10 - 202140232 tgtgtgtgtg------------- i ponAbe2.chr3 C 0 I 32 s nomLeu3.chr11 2813326 23 - 123690457 ttattttgttttttttttgtttt i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32771071 105 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C e chlSab2.chr15 91330470 32 + 91754291 I e papAnu2.chr2 187305540 32 + 187378091 I e macFas5.chr2 192385208 31 - 192460366 I e rheMac3.chrUn_JH291127 71334 27 - 111706 I e panTro4.chr3_GL389630_random 9064 792 - 103936 I a score=1092.000000 s hg38.chr3_KI270937v1_alt 34816 2 + 165607 tT s panTro4.chr3_GL389630_random 9856 2 - 103936 TT i panTro4.chr3_GL389630_random I 792 C 0 s ponAbe2.chr3 2351851 2 - 202140232 TT i ponAbe2.chr3 I 32 C 0 s nomLeu3.chr11 2813349 2 - 123690457 tt i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32771071 105 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C e chlSab2.chr15 91330470 32 + 91754291 I e papAnu2.chr2 187305540 32 + 187378091 I e macFas5.chr2 192385208 31 - 192460366 I e rheMac3.chrUn_JH291127 71334 27 - 111706 I a score=534823.000000 s hg38.chr3_KI270937v1_alt 34818 231 + 165607 gacggagtttcgctcttgttgcccaggctggagtgcagtgacgtgatctcggctcgtcgcaacctctgcttcccgggttcaagcgattcttctgtttcagcctcctgaatagctgagattacaggcacccgccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtcgcgaactcctgacctcaggttatccaccggcct s panTro4.chr3_GL389630_random 9858 231 - 103936 gatggagtttcgctcttgttgcccaggctggagtgcagtgatgtgatctcggctcatcgcaacctctgcctcccgggttcaagcgattcttctgtttcagcctcctgagtagctgagattacaggcatcctccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctggtcgcgaactcccgacctcaggttatccaccggcct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2351853 231 - 202140232 gatggagtttcgctcttgttgcccaggctggagtgcagtgacgcgatcttggctcatcgcagcctctgcctcccgggttcaagcgattcttctgcttcagcctcctgagtagctgagattacaggcacccgccaccattcctgactaa-ttttgtatttttagtagagacagggtttcaccgtgttggtcaggctggtctcgaactccggacctcaggttatccgccagcct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813351 231 - 123690457 gatggagtttcgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcatcacaacctctgcctcctgggttcaagcgattctcctgcttcagcctcctgagtagctgagattacaggcacccgccaccatgcctgactaa-ttttgtatttttagtagagacagggtttcaccatgttggtcaggctgggctcgaactcccaacctcaggtgatccgccggcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71361 232 - 111706 gatggagtttcactcttgttgcccaggctggagtgcagtggcgtgatctcggctcacggcaacctctgcctcccgggttcaagctattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcactacgcctgactaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtcttgaactcccgacctcaggtgatctgccggcct i rheMac3.chrUn_JH291127 I 27 C 0 s macFas5.chr2 192385239 231 - 192460366 gatggagtttcactcttgttgcccaggctggagtgcaatggcgtgatctcggctcacggcaacctctgcctcccgggttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggtgcctgtcactacgcctgactaa-ttttgcatttttagtagagacggggtttcaccatgttggtcaggctggtcttgaactcccgacctcaggtgatctgccggcct i macFas5.chr2 I 31 C 0 s papAnu2.chr2 187305572 231 + 187378091 gatggagtttcactcttgttgcccaggctggagtgcagtggcatgatctcagctcacggcaacctctgcctcctgggttcaagtgattctcctgcttcagcctcctgagtagctgggattacaggtgcccatcaccatgcctgactaa-ttttgcatttttagtagagacagggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgatctgccggcct i papAnu2.chr2 I 32 C 0 s chlSab2.chr15 91330502 227 + 91754291 gacggggtttcactcttgttgcccaggctggagtgcagtggcatgatctcagctcacggcaacctctgcctcccgagttcaagcgattctcctgcttcagcctcctgagtagctgggattacaggtgcccgtcaccatgcctaa-----ttttgcatttttagtagagacagagtttcaccatgttggtcagcctggtcttgaactcccgacctcaggtgatctgctggcct i chlSab2.chr15 I 32 C 0 e mm10.chr16 32771071 105 + 98207768 I e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C a score=79472.000000 s hg38.chr3_KI270937v1_alt 35049 31 + 165607 cggcctcccaaagtgctgggattacagacat s panTro4.chr3_GL389630_random 10089 31 - 103936 cggcctcccaaagtgctgggattacagacat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2352084 31 - 202140232 cggcctcccaaagtgctgggattacagacat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813582 31 - 123690457 cggtctcccaaagtgctgggattacaggcat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71593 31 - 111706 cggcctcccaaagtgctgggattacaggcat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192385470 31 - 192460366 cggcctcccaaagtgctgggattacaggcat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187305803 31 + 187378091 cggcctcccaaagtgctgggattataggcgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91330729 31 + 91754291 cggcctcccaaagtgctgggattacaggcat i chlSab2.chr15 C 0 C 0 s mm10.chr16 32771176 28 + 98207768 cgttcttccagaggacctgggtt-cagtt-- i mm10.chr16 I 105 C 0 e calJac3.chr17 73808803 452 + 74750902 I e canFam3.chr33 2304249 0 - 31377067 C a score=26414.000000 s hg38.chr3_KI270937v1_alt 35080 13 + 165607 gagaca-----ccCAGCA s panTro4.chr3_GL389630_random 10120 13 - 103936 gagaca-----ccCAGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2352115 13 - 202140232 gagaca-----cTCAGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813613 13 - 123690457 gagaca-----cccagca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71624 18 - 111706 gagacaccacgcccggca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192385501 18 - 192460366 gagacaccacgcccggca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187305834 18 + 187378091 gagacaccacgcccggca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91330760 18 + 91754291 gagataccacgcccggca i chlSab2.chr15 C 0 C 0 s mm10.chr16 32771204 7 + 98207768 -----------tctagca i mm10.chr16 C 0 C 0 s canFam3.chr33 2304249 13 - 31377067 gtggct-----cctagcc i canFam3.chr33 C 0 C 0 e calJac3.chr17 73808803 452 + 74750902 I a score=2166998.000000 s hg38.chr3_KI270937v1_alt 35093 655 + 165607 CCCTTCAGGTTTTCAGCCCTTTGCCAAAGGTACAACCCT--TTGGTCTAAGGGTACAACCCTTTGTAATGGTCCAAACAAATCTGCTCTCTAATTCACTT----------------TTTGTCATACCCAGCATAGCACTGTGTTCAGGAAAGAATCTGAAAGG-AGCTCTTTTTGAGGAGGTGGGGG--GAGAGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTCGGAACCCCCATTCCC----TCTTTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGATTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAATGCTGAGGATGCCAACTTCACGCTCAGAGACAGCTGCACCGACTTGGAGCTCTTTGGTAGGACTATTTGGCTGGCTGGGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTACACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA s panTro4.chr3_GL389630_random 10133 634 - 103936 CCCTTCAGGTTTTCAGCCCTTTGCCAAAGGTACAACCCT--TTG---------------------TAATGGTCTAAACAAATCTGCTCTCTAATTCACTT----------------TTTGTCATACCCAGCATAGCACTGTGTTCAGGAAAGAATCTGAAAGG-GGCTCTTTTTGAGGAGGTGGGGG--GAGAGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCGGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCACACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATGAAGCGGGAGACTGTCCTGCCTCGGAACCCCCGTTCCC----TCTCTGTGTTTCAGATCAGTTCCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACTAGCAACGCCGAGGATGCCAACTTCACGCTCAGAGACAGCTGCACTGACTTGGAGCTCTTTGGTAGGAATATTTGGCTGGCTGGGGAGAGCGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAA-TTT---GGGAAATTCTGCATTGCTACACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2352128 629 - 202140232 CCCTTCAGGTTTTCAGTCCTTTGCCAAAGGTACAACCC----TG---------------------TAATGGTCTAAACAAATCTGCTCTCTAATTCACTT----------------TTTGTCATACCCAGCATAGCACCGTGTCCAGGAAAGAATCTGAGAGG-AGCTCTTTTTGAGGAGGTTGGGG--GAGAGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGTGTCAGTC-G-AGAGCAGGTACACAGAATAACTCCTTCTTCCAGAGGTGGGTCACAGTCCTGGGAATGCCTCATACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTTGGAACTCCCATTCCC----TCTTTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCAGATTCAGTACACCAGCAATGCTGAGGATGCCACCTTCACGCTCAGAGACAGCTGTACCGACTTTAAACTCTTTGGTAAGAATATTTGGCTGGTT----AGAGTGGGGAGGTGGGTAGGGGATGAGGTCAGAGTCAAACTTT---GGGAAATTCTGCATTGCTGTACCCAGCAACACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2813626 631 - 123690457 cccttcaggttttcagccctttgccaaaggtacaaccc----tg---------------------taatggtctaaacagatctgCTCTCTAATTCACTT----------------TTTGTCATACCCAGCATAGCACCATGTTCAGGAAAGAATCTGAAAGG-AGCTC--TTTGAGGAGGTGGGGG--GAGAGAAAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCCGTCTGCTGTGCGTTACTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGATGGGTCACAGTCCTGGGAAAGCCTCACACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGTCCTGCCTGGGAACTCCCATTCCC----TCTTTGTGTTTCAGATCAGTACCCACCCTCCATCAATGGTAGTCATGTGGTTGAAGCCTACAAGGGGCAGATCACGCTGATTCAGTACACCAGCAATGCAGAGGATGCCACCTTCACGCTCAGAGACAACTGTACCGACTTTAAGCTCTTTGGTAAGAATATTTGGCTGGCTGAGGAGAGTGGGGAGGTGGGTAGGGGATGAGGTCGGAGTCAAACTTT---GGGAAATTCTGCACTGCTGTACCCAGCAACACTTGCTGTCAATCTTTC-----ATTCGAATATCCAGGACCGGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 71642 628 - 111706 cccttcaggttttcagccctttgccgaaggtacaactc----tg---------------------taacggtctaaacaaatctgCTCTCGAATTCGCTT----------------TTTGTCACACCCAGCATAGCACCATGTTCAGGAAAGAATCCGAAAGG-AGCTCTTTTGGAGGAGGCTGGGG--GAGAGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCGGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATATTATAT---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCC----TCTTTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCATGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGGACTGACTTTAAGCTCTTTGGTAAGAATGTTTGGCTGG----GGAGAGTGGGGAGGTGGGTA-GGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTGCCATCACTCTTTC-----ATTTGAATATCCAGGACCAGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192385519 628 - 192460366 cccttcaggttttcagccctttgccgaaggtacaactc----tg---------------------taatggtctaaacaaatctgCTCTCGAATTCGCTT----------------TTTGTCATACCCAGCATAGCACCATGTTCAGGAAAGAATCCGAAAGG-AGCTCTTTTTGAGGAGGCTGGGG--GAGAGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCGGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATATTAGAT---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCC----TCTTTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCATGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACACTTAGAGACAACTGGACTGACTTTAAGCTCTTTGGTAAGAATGTTTGGCTGG----GGAGAGTGGGGAGGTGGGTA-GGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATCGCTATACCCAGCAAAACTTGCCATCACTCTTTC-----ATTTGAATATCCAGGACCAGCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187305852 630 + 187378091 cCCTTCAGGTTTTCAGCCCTTTGCCGAAGGTACAACTC----TG---------------------TAATGGTCTAAACAAATCTGCTCTCTAATTCACTT----------------TTTGTCATACCCAGCATAGCACCATGTTCAGGAAAGAATCCGAAAGG-AGCTCTTTTtgaggaggctgggggagagagagagag-gctaaAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACAGTCCTGGGAATGCCTCACACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCC----TC-TTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGGTTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACGCTCAGAGACAACTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTGgctgg----ggagagtggggaggtgggTAGGGGATGAGGTCAGAGTCAAACTTT---GGGAAATTTTGCATTGCTATACCCAGCAAAACTTGCTGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91330778 630 + 91754291 cccttcaggttttcagtcctttgccaaaggtacaactc----tg---------------------taatggtctaaacaaatctgCTCTCTAATTCGCTT----------------TTTGTCATACCCAGCATAGCACCATGTTCAGGAAAGAATCCGAAAGG-AGCTCTTTTTGAGGAGGCTGGGGGAGAGAGAGAGAG-GCTAAAGATTTGGCTAGGTGGGCAGTACAGTCCCAGCCTGCTGTGCGTCAGTC-G-AGAGCAGGTACACAGAATAATTCCTTCTTCCAGAGGTGGGGCACCATCCTGGGAATGCCTCACACATATTAGAG---TTG--AGAAAGAGAGGAGGCTGATAAAGCAGGAGACTGCCCTCCCTCGGAACCCCCATCCCC----TCTTTGTGTTTCAGATCAGTACCCGCCCTCCATCAATGGTGGTCGTGTGATTGAAGCCTACAAGGGGCAGACCACGCTGATTCAGTACACCAGCAACGCTGAGGATGCCACCTTCACACTCAGAGACAGCTGTACTGACTTTAAGCTCTTTGGTAAGAATGTTTGGCTGG----GGAGAGTGGGGAGGTGGGTA-GGGATGAGGTCAGAGTCAAACTTC---GGGAAATTTTGCATTGCTATACCCAGCAAAACTTGCCGTCACTCTTTC-----ATTTGAATATCCAGGACCGGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73809255 630 + 74750902 ccctccaggttttcagccctttgccaaaggcacaactc----tg---------------------tgatgatctaaacAAGCGTGCTCTGTAATTCACTT----------------TTTGCCACACCCGGCATAGCACTGTGTTCAGGAAAGAATATGAAAGGAAACTCTTTTTGAGGAGGT-GGGG--GAGAGAAAGAGAGCTGAAGATTTGGATAGGTGGGCAGCACAGTCCCAGCCTGCTGTTCATCGGTCTG-AGAGCAGGTACCCAGAATAGTTCCTTCTTCCAGAGGTGGGTCCCAGTCCTGGGAATGCCTCACGTATCTTGTAG---TTG--AGAAGGAGAGGAGGCTGATGAAGCAGGAGACTGTCCCACCTCGGAACCCCCATCCCC----TCTTTGTCTTTCAGATCAGTACCCACCCTCCATCGAGGGTCGCCATGTGGTTGAAGCCTACAAGGGGCAGACCGTGCTGATTCAGTACACCAGCAATGCTGAGAATGTCACCTTCATGCTCAGAGACAATTGTACTGACTTGAAGCTCTTCGGTAAGAATGTTTGACTGG----GGAAAGTGGGGAGGTGGGTAGGGAATGAGGTCGGAATCAAACTTT---GGG-ATTTCTGCATCGCTATACCCAGCAAAACTTCCTGTCACTTGCTC-----ATTTGAATATCCAGGACTGGCA i calJac3.chr17 I 452 C 0 s mm10.chr16 32771211 618 + 98207768 cccacatgg----cagctcacaacc--atctttaactccagttg---------------------caatggatccaaca--ccttcacaccgacacacgtacatacaagcaaaaacattgacgtacacacaataaaa----ataCAGTTCTAATTTTAAAAGA-ATATATACAAAAAGAAAAGGAAA--GGAAAAGGGAG-TCTAAAGGTTAGAC--AGTGGGCAGCACAAACCCAACATGCTCGGCACCATTT-GCAGAGCACAGAGGAAGACTGAGTTCTGCTCCCAGAGGCCGGCCGCAGGCGTGGTAAGGACTCGGAGGAAGAGTCA---TGG--GGAAAGAGCAGAAA--GGGAAGAGTGGAGAGCGCCCTGT----GAATAACTAGTCTCCGTGCTTCTCTGTTTCAGATCAGTACCCACCCTCTATCAACTGCAGCAGCAAGATTCAAGCCTACAAGGGGCAGACAGTGACCACTGAGATCACCAGCAACTCTAAGGATGCCACACTCAGCCTCTCCAAGAAATGTAGTGGCTTTAAGCTCTTTGGTATGAATCTTTGGCTGG----CAATAG------GATGGGAG-------------GAGTCAT--CTT---GGGCTGCCTTACGTCTCTTTATTCTGTACAGTGCCCTGCCTCTTTTTTTTTTAATTTGAATAATCAAGACCAACA i mm10.chr16 C 0 I 1951 s canFam3.chr33 2304262 604 - 31377067 ------------------ctcttccaagggcaaaactc----tg---------------------tgatggtctgaataaccctggttccTGATTCACTT----------------TGTACCACGCCCAGCAGAGCGCTCTGATCAGGAGAGAGCTTGACCTG-AACCCTGTCTGGGGAG---GGAA--GATAAAGCGAG-GGTAAGGATTTGGCCAGGTGGGCAATTCAACCCCCACCTGCTCTACAGAAATCTG-AAAGCAGGTACATGGAGTAATTCCTGCTTCCAGAGGTGGGTCCTAGCCCTGAGAACACCTCCCACAAACCAGAGGACTAGACAGAGAGAGACGAGGCCCATGAGGCAAGAGAGTGTCCTGCCCCCAAACCCGAATCTCC----TGTTTGTGTTTCAGATGAGTACCCCCCGTCGATCGAGGGTCCACAGGCGGTGCAAGCCTACCTGGGGCAGACCACGCTGGTTCAGTACACCAGCCACCCTGAGCACGTCACATTCACTCTGAGGAACAGCAATAGTGACTTCAAGCTCTTCGGTAAGAGCCCTTGGGTGC---------------GGGTGG--AAGGGATGAGCTCAGAGTCAAGCTTTTTAAGGTAATTTTGCATTATCACGCCCTGGGCAATTTCATGTCACTTTTCC-----ACCGGAATATCTAGGACCAGCA i canFam3.chr33 C 0 C 0 a score=112460.000000 s hg38.chr3_KI270937v1_alt 35748 34 + 165607 TTTCCGAGGAGCGATATCTATAACTCAAATAGGT s panTro4.chr3_GL389630_random 10767 34 - 103936 TTTCCGAGGAGCGATATCTATAACTCAGATAGGT i panTro4.chr3_GL389630_random C 0 M 702 s ponAbe2.chr3 2352757 34 - 202140232 TTTCCGAGGAGCGATACCTGTAACTCAAATAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814257 34 - 123690457 TTTCCGAGGAGCGATACCTATAACTCAAATAGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72270 34 - 111706 TTTCTGAGGAACGATACGTATAACTCAAATAGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386147 34 - 192460366 TTTCTGAGGAACGATACGTATAACTCAAATAGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306482 34 + 187378091 TTTCTGAGGAACGATACATATAACTCAAATAGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331408 34 + 91754291 TTTCTGAGGAACGATACATATAACTCAAATAGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73809885 34 + 74750902 TTTCTTTGGAATGATACCTATAACTCAAATAGGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2304866 33 - 31377067 TTTCCGA-GAATGATCCCTATGATTCAGATAGGT i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I a score=2960.000000 s hg38.chr3_KI270937v1_alt 35782 2 + 165607 GC s ponAbe2.chr3 2352791 2 - 202140232 GC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814291 2 - 123690457 GC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72304 2 - 111706 GC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386181 2 - 192460366 GC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306516 2 + 187378091 GC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331442 2 + 91754291 GC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73809919 2 + 74750902 GC i calJac3.chr17 C 0 I 332 s canFam3.chr33 2304899 1 - 31377067 G- i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e panTro4.chr3_GL389630_random 10801 702 - 103936 M a score=279962.000000 s hg38.chr3_KI270937v1_alt 35784 116 + 165607 CCCCCAGTAAGTAGTAGTGACGGGCTTACGGCG-GTTTGGCCAGATAGCTAGAGTGACTCTGGGCACATAGAACTGATTCAAggctgggcgcggtggctcatgcctgtcat----cccagc s ponAbe2.chr3 2352793 116 - 202140232 CCCCCAGTAAGTAGTAGTGACGGGCTTATGGCA-GTTTGGCCAGATAGCTAGAGTGACTCTGGGCACATAGAACTGATTCAAggctgggcacagtggctcacacctgtcat----cccagt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814293 116 - 123690457 CCCCCAGTAAGTAGTAGTGACGGGCTTATGGCG-GTTTGGCCAGATAGCTACAGTGACTCTGGACACACAGAACTGATTCAAggccgggcgcggtggctcacgcctgtcat----ctcaga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72306 116 - 111706 CCCCCAGTAAGTAGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATGTGGGCACATAGAACTGATTCAAggctgggcgtggtggctcaggcctgtcat----cccagc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386183 116 - 192460366 CCCCCAGTAAGTAGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATGTGGGCACATAGAACTGATTCAAggctgggcgtggtggctcaggcctgtcat----cccagc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306518 116 + 187378091 CCCCCAGTAAGTAGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATCTGGGCACATAGAACTGattcaaggctgggcgcggtggctcatgcctgtcat----cccagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331444 116 + 91754291 CCCCCAGTAAGTAGTAGTGACAGGCTTATGGTG-ATTTGGTCAGATAGGTAGAGTGAATCTGGGCACATAGAACTGATTCAAggctgggcgcggtggctcatgcctgtcat----cccagc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810253 121 + 74750902 CCCCCAGTAAGTAGTAATGACAGGCTTATGGTGAATTTGGCCAGATAGGTAGAGTGACTCTGGGCACATAGGACAGATTCAAggctgggcacagtggctcacacctgtcctcacacctagc i calJac3.chr17 I 332 C 0 s canFam3.chr33 2304900 93 - 31377067 CCCCCAGTGAACAGCAGCGATGGCCTTCTGGAA-GTCTGGCCAGCGAGCAAAGCTGTCTC-GGGCCCGCGCAAGTGATTCAAAG----------------------GTCAT----TCCACC i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e panTro4.chr3_GL389630_random 10801 702 - 103936 M a score=368905.000000 s hg38.chr3_KI270937v1_alt 35900 174 + 165607 gctttgggaggccgaggtgggcggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctgtactaaaaatacaaaaaaaaaaaaaaaagccaggcatggtggtgcatgcctgtaatcccagctactcaggagactgaggcaggagaatcgc-tt s ponAbe2.chr3 2352909 167 - 202140232 gctttgggaggccgaggcaggaggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaata-------gccgggcatggtggtgcatgcctgtaatcccagctactcaggagactgaggcaggagaatcac-tt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814409 167 - 123690457 gctttgagaggccgaggcgggcggatcatctgaggtcaggagttcgagaccagtctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaata-------gccgggcgtggtggtgcatgcctgtaatcccagctcttcaggagactgaggcaggagaatcgc-tt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72422 167 - 111706 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata-------gccaggcatggtggcgggtgcctgtaatcccagctcttcgggagactgaggcagaagaatcgc-tt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386299 167 - 192460366 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata-------gccaggcatggtggcgggtgcctgtaatcccagctcttcgggagactgaggcagaagaatcgc-tt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306634 168 + 187378091 actttgggaggccgacgcgggtggatcatctgaggtcaggagtttaagaccagcctggccaacacggtgaaaccccatctctactaaaaaaacaaaaaaata-------gccaggcatggtggcgggtgcctgtaatcccagctcttcgggagactgaggcagaagaatctcttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331560 167 + 91754291 actttgggaggccgacgcaggtggatcatctgaggtcaggagtttaagaccagcctggccaacacagtgaaaccccatctctactaaaaaaacaaaaaaata-------gccaggcatggtggcgggtgcctgtagtcccagttcttcgggagactgaggcagaagaatcgc-tt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810374 166 + 74750902 actttgggaggccacggtgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaagcccttctgtactaaaaatat-aaaagata-------gccaggcgtagtggcaggcgcctgtaatcccagttacttgggaggctgaggcaagagaatcac-tt i calJac3.chr17 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e canFam3.chr33 2304993 0 - 31377067 C e panTro4.chr3_GL389630_random 10801 702 - 103936 M a score=27318.000000 s hg38.chr3_KI270937v1_alt 36074 10 + 165607 gaacccagga s ponAbe2.chr3 2353076 10 - 202140232 gaacccagga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814576 10 - 123690457 gaacccagga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72589 10 - 111706 gaacctagga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386466 10 - 192460366 gaacctagga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306802 10 + 187378091 gaacctagga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331727 10 + 91754291 gaacctagga i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810540 10 + 74750902 gagcccggga i calJac3.chr17 C 0 C 0 s canFam3.chr33 2304993 10 - 31377067 AAACCCAGTA i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e panTro4.chr3_GL389630_random 10801 702 - 103936 M a score=113004.000000 s hg38.chr3_KI270937v1_alt 36084 36 + 165607 ggcagatgttgcagtgagctgagatcgcgtcactgc s panTro4.chr3_GL389630_random 11503 36 - 103936 ggcagatgttgcagtgagctgagatcgcgtcactgc i panTro4.chr3_GL389630_random M 702 C 0 s ponAbe2.chr3 2353086 36 - 202140232 ggcagatgttgcagtgagctgagatcacatcactgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814586 36 - 123690457 ggcagatgttgcagtgagctgagatcgcgtcactgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 72599 36 - 111706 ggcagatgttgcagtgaactgagatcgcgtcactgc i rheMac3.chrUn_JH291127 C 0 I 528 s macFas5.chr2 192386476 36 - 192460366 ggcagatgttgcagtgaactgagatcgcgtcactgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306812 36 + 187378091 ggcagatgttgcagtgaactgagatcgcgtcactgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331737 36 + 91754291 ggcagatgttgcagtgaactgagatcgcatcactgc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810550 36 + 74750902 ggcagatgttgccgtgagccgagatcgagtcactgt i calJac3.chr17 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e canFam3.chr33 2305003 0 - 31377067 C a score=73745.000000 s hg38.chr3_KI270937v1_alt 36120 48 + 165607 actccagcct-ggtgacagagcgagactctgtctcaaaaaaaa-------------gaTTTG s panTro4.chr3_GL389630_random 11539 61 - 103936 actccagcct-ggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaaaaaaagaTTCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353122 55 - 202140232 acttcagcct-ggtgacagagtgagactctgtctcaaaaaaaa------aaaaaaagaTTCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814622 54 - 123690457 actccagcct-ggtgacagagcaagactctgtctcaaaaaaaa-------aaaaaagaTGCG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192386512 49 - 192460366 actccagcctgggcaatagagcaagactccatctcaaaaa---------aaaaaacaa---- i macFas5.chr2 C 0 I 15 s papAnu2.chr2 187306848 58 + 187378091 actccagcctgggcaatagagcgagactccatctcaaaaaacaaaaaacaaaaaacaa---- i papAnu2.chr2 C 0 I 14 s chlSab2.chr15 91331773 58 + 91754291 actccagcctgggcaatagagcgagactccatctcgaaaaaaagaaaaagaaaaaaaa---- i chlSab2.chr15 C 0 I 11 s calJac3.chr17 73810586 55 + 74750902 actccagcctgagcaacagagcaagattctgtctcaataaaaa-------ggaaCTAATTCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e canFam3.chr33 2305003 0 - 31377067 C e rheMac3.chrUn_JH291127 72635 528 - 111706 I a score=88696.000000 s hg38.chr3_KI270937v1_alt 36168 27 + 165607 AAGATCATTTAATCTCAATCTGATCAT s panTro4.chr3_GL389630_random 11600 27 - 103936 AAGATCATTTAATCTCAATCTGATCAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353177 27 - 202140232 AAGATCATTTAATCTCAATCTGATCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814676 27 - 123690457 AAGATCATTTAATCTCAATCTGATCAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73163 27 - 111706 AAGATCATTTAATCTCAATCTGATCAT i rheMac3.chrUn_JH291127 I 528 C 0 s macFas5.chr2 192386576 27 - 192460366 AAGATCATTTAATCTCAATCTGATCAT i macFas5.chr2 I 15 C 0 s papAnu2.chr2 187306920 27 + 187378091 AAGATCATTTAATCTCAATCTGATCAT i papAnu2.chr2 I 14 C 0 s chlSab2.chr15 91331842 27 + 91754291 AAGATCATTTAATCTCAATCTGATCAT i chlSab2.chr15 I 11 C 0 s calJac3.chr17 73810641 27 + 74750902 GAGATTATTTAATCTCAATCTGATCAT i calJac3.chr17 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I e canFam3.chr33 2305003 0 - 31377067 C a score=120503.000000 s hg38.chr3_KI270937v1_alt 36195 40 + 165607 ATATAGTCATCTTTAGTCA---T---TATGCATTCACCAAATTATT s panTro4.chr3_GL389630_random 11627 37 - 103936 ATATAGTCATCATCAGTCA---T------GCATTCACCAAATTATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353204 40 - 202140232 ATACAGTCATCTTTAGTCA---T---TATGCATTCACCAAATTATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814703 40 - 123690457 ATACAGTCATCTTTAGCCA---T---TATGCATTCACCAAATTATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73190 40 - 111706 ACGCAGTCATCTTTAATCA---T---TATGCATTCACCAAAGTATT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386603 40 - 192460366 ACGCAGTCATCTTTAATCA---T---TATGCATTCACCAAAGTATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306947 40 + 187378091 ACGCAGTCATCTTTAATCA---T---TATGCATTCACCAAAGTATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331869 40 + 91754291 ATGCAGTCATCTTTAATCA---T---TATGTATTCACCAAAGTATT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810668 43 + 74750902 ATGCAGTCATCTTTAATTA---TCCTTATGCATTCACCAAATTATT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2305003 43 - 31377067 ACACGATCATCTTTAACCAGCTT---GATGCGGTCACCGAATTACT i canFam3.chr33 C 0 C 0 e mm10.chr16 32771829 1951 + 98207768 I a score=960392.000000 s hg38.chr3_KI270937v1_alt 36235 303 + 165607 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGCTCTAATGTAGGACAAGATTTAAAGAAATATGAAAAATACTTTCGTTTGGTACCTTTCTTGCTCTTTT--TGTCTGGCAACCATGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAGAGTGCCATCGCTCCCTCTCCGTAAAGGTGTTAGAGACCCCGAGCCCTACATCCATGATCAGGGCCAAAGGCTCCA--AGCACAAGGGACGCTGCTTTCGTCTGTT s panTro4.chr3_GL389630_random 11664 303 - 103936 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGTTCTAGTGTAGGACAAGATTTAAAGAAATATGAAAAATACTTTCGTTTGGTGCCTTTCTTGCTCTTTT--TGTCTGGTAACCATGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCCTCTCCGTAAAGGTGTTAGAGACCCCGAGCCCTACATCCATGATCAGGGCCAAAGGGTCCA--AGCACAAGGGATGCTGCTTTCGTCTGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353244 303 - 202140232 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGATTTAAAGAAATATAAAAAATACTTTTGTTTGGTACCTTTCTTGCTCTTTT--TGTCTGGTAACCATGTTTACC--TAGCCGTGTCTCTCCTTGTCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCCTCTCCGTAAAGGTGTTAGAGACCCTGAGCCCTACATCCATGATCAGGGCCAAAGGGTCCA--AGCACAAGGGATGCTGCTTTCGTCTGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2814743 298 - 123690457 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATGTAATGTAGGACAAGATTTAAAGGAATATAAAAAATACTTTTGTTTGGTACCTTTCTCGCTCTTTT--TGTCTGGTAACCATGTTTACCTATAGCCATGTCTCTCCTTGCCTGGTTTCCTGGGCTAGGACCCAGTAAAGTGCCATCGCTCCCTCTCCGTAAAGGTGTTAGAGACCCCGAGCCCTACATCCATGATCAGGGCGAAAGGGTCCA--AGCACAAGGGATGCCACTTTC------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73230 295 - 111706 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTTTCTTGCTCTTTTTATGTCTGGTAACCGTGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCCTCTCCATAAAGGTGTTAGAGACCCTGAGCCCTGCATCCACGATCAGGGCCAAAGGGTCCC--AGCACAAGGGATGCCGCT---------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386643 295 - 192460366 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTTTCTTGCTCTTTTTATGTCTGGTAACCGTGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACGTACCATCGTTTCCTCTCCATAAAGGTGTTAGAGACCCTGAGCCCTGCATCCACGATCAGGGCCAAAGGGTCTC--AGCACAAGGGATGCCGCT---------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187306987 295 + 187378091 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACaacatttttatatctattaaagGAAGGATCTAATGTAGGACAAgacttaaagaaatataaaaaatactttcatttggTACCTTTCTTGCTCTTTTTATGTCTGGTAACCGTGTTTACC--TAGCTGTGTCTCTCCTTGTCTGATTTCCTGGGCTAGGACCCAGTAACATACCATCGCTTCCTCTCCATAAAGGTGTTAGAGACCCTGAGCCCTGCATCCACGATCAGGGCCGAAGGGTCCC--AGCACAAGGGATGCCGCT---------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91331909 291 + 91754291 AGAATAATCAAGTGCAACA-TTTAA-AATGACCAATTTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGGACAAGACTTAAAGAAATATAAAAAATACTTTCATTTGGTACCTTTCTTGCTCTTTTTATGTCTGGTAACCGTGTTTACC--TAGCTGTGTCTCTCCTTGCCTGATTTCCTGGACTAGGACCCAGTAACGTACCATCGCTTCCTCTCCATAAAGGTGTGAGAGACCCTGAGCCC----TCCACGATCAGGGCCAAAGGATCCC--AGCACAAGGGATGCCGCT---------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73810711 296 + 74750902 AGAA-AATCAAGTGCAACAGTTTAA-AATTACCAG-TTACAACATTTTTATATCTATTAAAGGAAGGATCTAATGTAGG--AAAATTTAAAGAAATAT-AAAAATACTTTTGTTTACTACCTTTCTTGCTCTTTTTGTCTGTGGTAACCATGTTAACC--TAGCTGTGTCTCTCCTCGTCTGGTTTCCTGGA-TAGGACCCAGTAAGGCGTCACGGGTCCCTCTCTGTAAAGGTGTTAGAGACTCCAAGACCTGCATCCATGATCAGGGCCAAAGGGTCTCAAAGAATAGGGGATGCCGCTCTCT------ i calJac3.chr17 C 0 C 0 s mm10.chr16 32773780 255 + 98207768 AAGATAAATAAATGTGATA----AA-ACCAATGAGTTTAAAGCATTATCATATCTATTAAATGAATAACACACTGTGGAATGAGATCAAAACATAT-----AAATAGCTTCA-CTGGTACTTTTC--GTTGTTTTTATGGCCATTAGCTATGCTTATC--TGGTTTTCTGTCTCCTTGTCTGATTTTCTGGATTGGGAC----TAACACAAT-TCTTCCCTTCTTAGTAATGGGATCTGAGAACCTGGG--------CTGGCAGCTGGATTGAAGGGCCAA--AG-------------------------- i mm10.chr16 I 1951 C 0 s canFam3.chr33 2305046 297 - 31377067 ---AGAATAGAGTGTAACAATTTAACAAATACTGATCTAAAGCATTTTCAAATCTATTAAAAGAAGGCTATCACGTGGAACAGGATTTAAAGGTAT-----AAATAGCTTCATTCGGCGTGGTTCTCATTATTTTTATGTCGGTCAACCACGATTGCC--CAACTCTGTCTCTCCCTGT-TGCTCTTCTGTACTGGGACCAAGCAAAGCCTCATTTCTGCCTGTCAGTACTGGTGT-GGAGACCCCTCGTCCTAAAACCGTGACCTGGGTGGAAAAGTCAA--AGCCCACAGGATGCAACTTCCCTTCTTT i canFam3.chr33 C 0 I 192 a score=12360.000000 s hg38.chr3_KI270937v1_alt 36538 43 + 165607 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC s panTro4.chr3_GL389630_random 11967 43 - 103936 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353547 43 - 202140232 GCCAGCACTAATTCAAAGGGTCCAAGGGCATCAAAGGGATGCC i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32774035 0 + 98207768 C e calJac3.chr17 73811007 0 + 74750902 C e canFam3.chr33 2305343 192 - 31377067 I e chlSab2.chr15 91332200 0 + 91754291 C e papAnu2.chr2 187307282 0 + 187378091 C e macFas5.chr2 192386938 0 - 192460366 C e rheMac3.chrUn_JH291127 73525 0 - 111706 C e nomLeu3.chr11 2815041 0 - 123690457 C a score=216128.000000 s hg38.chr3_KI270937v1_alt 36581 72 + 165607 ACTTTCTGTCTGTTGCCAGCACTAATTCTGAGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCGGGGGG-CATA- s panTro4.chr3_GL389630_random 12010 73 - 103936 ACTTTCTGTCTGTTGCCAGCACTAATTCTGAGGGTGACTGTTCTTGGCTAAACCAAAG-CCCTGGGGGGGCATA- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353590 72 - 202140232 ACTTTCTGTCTGTTGCCAGCACTAATTCTGCGGGTGACTGTTCTTGGCTAAATCAAAG-CCCCAGGGGG-CATA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2815041 65 - 123690457 -------GTCCATTGCCAGCACTAATTCTGCGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCAGGGGG-CATA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73525 65 - 111706 -------GCCTGTTGCCAGCACTAATTCTGTGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCAGGGGG-CATA- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192386938 65 - 192460366 -------GCCTGTTGCCAGCACTAATTCTGTGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCAGGGGG-CATA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187307282 65 + 187378091 -------GCCTGTTGCCAGCACTAATTCTGTGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCAGGGGG-CATA- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91332200 65 + 91754291 -------GCCTGTTGCCAGCACTAATTCTGTGGGTGACTGTTCTTGGCTAAACCAAAG-CCCCAGGGGA-CATA- i chlSab2.chr15 C 0 I 8 s calJac3.chr17 73811007 65 + 74750902 -------GTCTGTTGCCAGCACTAATTCTGC-GGTGGCTGTTCTTGGCTAAACCAAAGCCCCCAGGGAG-CGTG- i calJac3.chr17 C 0 C 0 s mm10.chr16 32774035 50 + 98207768 ------------TTGGAAGGGAT---------GGTGACT-TTCTTTGCTAAACCAGAA-TCATCAGGGA-CCTG- i mm10.chr16 C 0 I 1 s canFam3.chr33 2305535 73 - 31377067 ACTTCCCTTCAGTTGCCAGCACCACTTATGCTAAAGACTATTCTTTGCTAAACTAAAG-CCATTAGGGA-CCTTA i canFam3.chr33 I 192 C 0 a score=17110.000000 s hg38.chr3_KI270937v1_alt 36653 10 + 165607 TTTTGCGTTC s panTro4.chr3_GL389630_random 12083 10 - 103936 TTCTGCGTTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353662 10 - 202140232 TTCTGCGTTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2815106 10 - 123690457 TTCTGCGTTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73590 8 - 111706 -TCTGCATT- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192387003 8 - 192460366 -TCTGCATT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187307347 8 + 187378091 -TCTGCATT- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73811072 10 + 74750902 TTCTGCGTTC i calJac3.chr17 C 0 C 0 s mm10.chr16 32774086 10 + 98207768 CTCTGGACTC i mm10.chr16 I 1 C 0 s canFam3.chr33 2305608 10 - 31377067 TTTTGAGCTC i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91332265 8 + 91754291 I a score=3256039.000000 s hg38.chr3_KI270937v1_alt 36663 994 + 165607 ------TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCTGTGTCTCAGAAGGGACTGCTTTGCC-TGCATCCCTTTTGCCC------------------------------------------CAT-GT-GCGTCCTCCCAGGTGCGAGACAATGGCACTGAGAGGTTTTCT-TCTCCACGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATTCTCTG---TCACTTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA-----AAAATATCAG------TTTGATCTGAA-----------GATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG-AAAGGTCCAGGAAGT----GGGGGGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCCGTGAGAGTGAAGCCAGTTTGGCCGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTGCCCTTTGGGGTTTCTTCA----GGAGGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACGTCCTTCCAGCTGGGAGCGTGACCAGGATCACCCC--CG-ATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTGTCTgggga-gggggagggtggcctgagaggggtgggggaAGCCCCGTATCAGCAATCAGACCACAGAGCCG--AGGA------------------------GTCTCCCAGCTCTCAACATTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAATCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGTGGGGGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGC s panTro4.chr3_GL389630_random 12093 1017 - 103936 ------TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGTGTCTCAGAAGGGACTGCTTTGCC-TGCATCCCTTTTGCCC------------------------------------------CAC-GT-GCGTTCTCCCAGGTGCGAGACAATGGCACCGAGAGGTTTTCT-TCTCCACGGGCCCCACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATTCTCTG---TCACTTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA-----AAAATATCAG------TTTGATCTGAA-----------GATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG-AAAGGTCCAGGAAGT----GGGGAGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGAGTGAAGCCAGTTTGGCTGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTCCCATCCTGGTGTGAGCCCGGCCAGGGCTGCCCTTTGGGGTTTCTTCA----GGAGGAAACTGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGATCACCCC---G-ATACCAGCCTTGCACAAAGGAAATGACCAATGAGATTTGTCTGGGGC-GGGGGAGGGTGGCCTGAGAGGGGTGGGGGAAGCCCCATATCAGCAATCAGACCACAGAGCTG--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCCAGCTCTCAACATTCTCATCTTCCCTGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGCGGGGGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2353672 1017 - 202140232 ------TCTTTGCCTC-----TCTGCCTGATGTTCCTTCTCCCCGTGTCTCAGAAGGGACTGCTTTGCC-TGCATCCCTTTTGCCC------------------------------------------CAC-GT-GCGTCCTCCCAGGTGCGAGACAATGGCATTGAGAGGTTTTCT-TCTCCACGGGCCCTACCCCTGAAGGACGATGGTCTGGAAATTACGTTCGT------CTATTCTCTG---TCACTTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCTTATTTTCTTGA-----AAAATATAAA------TTTGATCAGAA-----------GATATGTAGTAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG-AAAGGTCCAGGAAGT----GGGGGGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGAGTGAAGCCAGTTTGGCTGGCAGCGCAGCCTGAGGAGGTGTCTGGAGGATTCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTGCCCTTTGGGGTTTCTTCA----GGAGGAAACTGCTTTCCCCTCTGTGGCATTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGATCACCCC--CG-ATACCAGCCTTGCTCAAAGGAAATGA-CAATGAGATTTGTCTGGGGAGGGGGGAAGGTGGCCTGAGAGGGGTGGGGGAAGCCCCGTATCAGCAATCAGGGTGT-TAGATG--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCCAGCTCTCCACATTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGTCTTGGCCTCTGCACTCCAGCCCAGGACCGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTCGTACAACCAGACCAGCAGGGTAGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGCGCGTGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAATGGATGC i ponAbe2.chr3 C 0 I 830 s nomLeu3.chr11 2815116 1017 - 123690457 ------TCTTTGCCTC-----TCTGCCTGATGTTCTTTCTCTCCGCGTCTGAGAAGGGACTGCTTTGCC-TGCAACCCTTTTGCCC------------------------------------------CAC-GT-ACGTCCTCCCAGGTGCGAGACAATGGCATTGAGAGATTCTCT-TCTCCACGGGCCCCACCCCTGAAGGACGATGATCTGGAAATTACGTTCGT------CTATTCTCTG---TCACTTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCCTATTTTCTTGA-----AAAATATAAG------TTTGATCAGAA-----------GATATGTAGCAGTGTTTCACTACAGTCTGGTGTCTGAAGGGGGTGTCTGGG-AAAGGTCCAGGAAGT----GGGGGGTGGG----TGAGAAACCAGGGCAAAGGATGGGGCTGCTGTGAGACTGAAGCCAGTTTGGCCGGCAGCGCAGCCTGGGGAGGTGTCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTCCCATCCTGGTGTGAGCCCAGCCAGGGCTG-CCTTTGGGGTTTCTTCA----GGGGGAAACCGCTTTCCCCTCTGTGGCGTTCCCCGCTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACTAGGATCACCCC--CG-ATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTGTCTGGGGAGGGGGGAGGGTGGCCTGAGAGGGGTGGGGGAAGCCCAGTATCAGCAGTCAGGGTGT-TAGATG--AGGATGCGTCAGACCACAGAGCTGAGGAGTCTCCCAGCTCTCAACGTTCTCATCTTCCCCCGGGCAGAGAATGGGACGTTGCTGTGGACACCCAAGTCGCTGGAGCCATTCACTCTGGAGATTCTAGCAAGACGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACCGTGGTCTGCCATTGCAGTGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGCTGGGAGGCGGGTGAGGAG----TGTCTGTGCCGAGGGGAGAGGAAATGGGAGTGGAACGGATGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 73598 1046 - 111706 ------TCTTTACCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCC-CACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAACTGTGCCC------CAC-GT-GCGTCCTTCCAGGTGCAAGACAACGGCGTTGGGAGATTTTAT-TCTCCACGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTTCTCTG---TCACTTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA-----AAAGTGTAAG------TTGGATCAGAA-----------GATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGT-TGGG-AAAGGCCCAGGAAGT----GGGGGGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGAATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCGTTG-------ATCCTCCATCCC-CCAGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTTCA----GTGGGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGATCACCC----G-ATACCAGCCTTGCTCAGAGGAAATCACCAATGAGATTTGTCTGGGGAGTGGGGA-GGTGGCCTGAGATGGGTGGGAGAAGCCCCGCATCAGCAATCAGGGTGT-TGGATG--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGCAGGTGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192387011 1047 - 192460366 ------TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCC-CACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGCCC------CAC-GT-GCGTCCTTCCAGGTGCAAGACAATGGCGTTGGGAGATTTTAT-TCTCCACGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTTCTCTG---TCACTTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA-----AAAGTGTAAG------TTGGATCAGAA-----------GATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGTCTGGG-AAAGGTCCAGGAAGT----AGGGGGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGAATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTGCCATCCTGGTGCAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTTCA----GTGGGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCATGACCAGGATCACCC----G-ATACCAGCCTTGCTCAAAGGAAATCACCAATGAGATTTGTCTGGGGAGTGGGGA-GGTGGCCTGAGATGGGTGGGAGAAGCCCCGCATCAGCAATCAGGGTGT-TGGATA--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCCGGCTCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCACTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGCAGGTGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187307355 1049 + 187378091 ------TCTTTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTGTGCCAGAAGGGACTGCTTTGCC-CACATCCCTTTTGCCTCACATGCGTCCTCCCAAGTGTGAGACAATTGTGCCC------CAC-GT-GCGTCCTTCCAGGTGCAAGACAACGGCGTTGGGAGATTTTAT-TCTCCACGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCGT------CTGTTCTCTG---TCACTTCCTTTCAATCTGCTGTTCT----AGGCTTTCCTATTTTCTTGA-----AAAGTGTAAG------TTGGATCAGAA-----------GATGTGTAGCAGTGTTTCACTACAGTGTGGTGTCTGAAGGGGGTGT-TGGG-AAAGGTCCAGGAAGT----GGGGGGTGGG----TGAGAAATCAGGGCAAAGGATGGGGCTGCTGTGAGAATGAAGCTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGATCCTGGCCTTG-------ATCCTCCATCCC-CCAGGATGTGCCATACTGGTGCAAGCCCAGTGAGGGCTGCCCTTTGGGGTTTCTTCA----GTGGGAAACTGCTTTCCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGATCACCCC--TG-ATACCAGCCTTGCTCAAAGGAAATCACCAATGAGATTTgtctggggagtggggagggtggcCTGAGAGGGGTGGGAGAAGCCCCGCATCAGCAATCAGGGTGT-TAGATG--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCCGGCGCTCAACGTTCTCATCTTCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCGAGAAGTGCCAAGATTGGCTTGgcatctgcactccagcccaggactGTGGTCTGCCATTGCAAAGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAGCTCCTCCCTGGAGGTGAGTGTTGGGAGGCAGGTGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACAGATGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91332273 958 + 91754291 ------TCATTGCCTC-----TCTGCCTGACGTTCTTTCTCTCCGTATGTCAGAAGGGACTGCTTTGCC-CACATCCCTTTTGCCTCACATGCGTCCTCCTAGGTGTGAGAC------AATTTTGCCCCAC-GT-GCGTCCTTCCAGGCGCAAAACAACGGCGTTGGGAGATTTTGT-TCTCCACGGGCTCCATCCCTGGAGGACGATGGTCTGGAAATTGCGTTCAT------CTGTTCTCTG---TCACTTCCTTTCAATCTGCTGTTCTAGGGAGGTTTTCCTATTTTCTTGA-----AAAGTGTAAG------TTGGATC---A-----------GATGTGTAGCAGTGTTTCACTACAGT-----------------------------------------------------------------------------------------------------CTGGTTTGGCTGGCAGCATAGCCTGGGGAGGTGCCTGGAGGACCCTGGCCTTG-------ATCCTCCATCCC-CCAGCATGTGCCATCCTGGTGAAAGCCCAGCGAGGGCTGCCCTTTGGGGTTTCTTCA----GTGGGAAACTGCTTTTCCCTCTGTGGTGTCCCCCGTTACAATCAGTATGTTGGACTGGTGCCACCTCCTTCCAGCTGGGAGCGTGACCAGGATCACCCC---G-ATACCAGCCTTGCTCAAAGGAAATGACCAATGAGATTTGTCTGGGGAGTGGGGAGGGTGGCCTGAGAGGGGTGGGAGAAGCCCCGCACCAGCAATCAGGGTGT-TGGATG--AGGATGCATCAGACCACAGAGCTGAGGAGTCTCCTGGCTCTCAACGTTCTCATCTCCCCCGGGGCAGAGAATGGGACGTTGCTATGGACACCCAAGTCGTTGGAGCCATTCACTCTGGAGATTCTAGCAAGAAGTGCCAAGATTGGCTTGGCATCTGCCCTCCAGCCCAGGACTGTGGTCTGCCATTGCAATGCAGAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTGGGCAACTCCTCCCTGGAGGTGAGTGTTGGGAGGCAGGTGAGGAG----TTTCTGTGCCGAGGGGAGAGGAAACGGGAGTGGAACGGATGC i chlSab2.chr15 I 8 C 0 s calJac3.chr17 73811082 991 + 74750902 ------CCTTTGCCTCAGGAGGGTGCCTGAGTTCCTTCCTCTCTGTGTGTCAGAAGGGACTGCTCTGCC-TGCATCCCCTTTGCCC------------------------------------------CCC-GT-GTGTCCTCCCAGGTGTAAGACAATGGCACTGGGAGATTTTCT-GCTCCACCGG-TCCACCCTTGAAGAATGAGGGTCTGGAAATTACATTCA-------------TCTG---TGACTTCCTTTCAATCTGCTGTTTTAAGGAGACTTTCGTATTTTCTTGA-----AAAATATAAA------TTTGATCAGAA-----------GATATATCG------------------------CTGGAGGGGCTGTCTGGTCAAAGGTCCAGGAAGT-----GGGGGTGGG----TGAGAAATCAGGGAAAAGTATGGGACTGCCATGAGACTGAAACCAGTTTGACTGGCAGCATAGCCTGGGGAGGTGTCTGGAGGACCCTGGCCTTT-------ATCCTGCATCCC-CCAGGAGGTCCCATCCTAGTGCAAGCCCAGGCGGGGCTGCCCTTTGGGGTTTCTTCA----GGGGGAAACTGCTTTCCCCTCTGTGGAGTCCCCTGCTACAGTCAGTAAGTTGGGCTGGTGCTACCTCCTTCCAGCTGGGAGTTTGACCAGTATTACCCC--CGCATACCAGCCTTGCTCAAAGAAAATGACCAGTGAGATCTGTCTGGGGC-AGGGGAGGGTGGTCTGAGAGTGG-GGGGGAAGCCC-GCATCAGCAATCAGGGTGT-TAGATGCCAGGATGCATCAGACCACGGAGCAGAGGAGTCTCCCAGCTCTCAATGATCTCATTTTCCCCCGGGCAGAGAATGGGACATTGCTGTGGACACCCAAGTCACTGAAGCCATTCTCTCTGGAGATTCTAGCAAGAAGTGCCAAGACTGGCTTGTCGTCTGCACTCCAGCCCAGGACCATGGTCTGCTACTGCAGTGCAAAGAGCCAGTGTTTGTACAACCAGACCAGCAGGGTAGGCAGCTCCTCCCTTGAGGTGAGTGTTGGGAGGAGGGTGGTTAG----TGTCTGTGCTAAGGGGTGAGGAAATGGGAGTTGAAGGGATGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32774096 863 + 98207768 ----------TGACCA-----CCAAACTATCTCCTTTTGCTTTTCTGGGCACGGAGGGGTCACTCCGTCACACGTTCTTTGTTCCT------------------------------------------TATGGC-ACAACCT------TGGCATGCAGTGGCATTACACGGCTTTCT-GCCACCCTGGGCAT---CCTGAAAATCGATGGTATGAAGTTAACTCCCTTCCACCCCTACTCTCTG-------TTCCTTCCAAGCTGTTCTTTA--------TTCTCTGTATTCTGAC-----A---------------TTTGAT-------------------------------------------------------GAGGTATC-----CCAGGCCTGGAAAGT---CAGAGGACGGGACGTTAAAAAGGCAGAAGAGAGGCTGGGA----------GGTGAAGCCATTCC-----ACACTGAAGTTTGGGGATGTGTTAAGAGGACCATG--CTTG-------GT--------CC-CCATCATGACCCATCCTGGTACAGCCACAGGCAGGGATGCATTCAGGGGCCTCTTCATTAGGGGGTGGGTAGCCTTCCCTTATGT-GTATTTCTACCTACACCCAGCATGTTCAGCAGGTGCTGCCTCCCTCCAGCTAGGAGCATGACCACCATCACCCTGGGA-ACCCCAGCTCTACTCA------------------------------------GAAGGATGCCTGAG---GGTGTGGGAAGACC-ACCTCCGTAGTTCGAGTGT-TAGATGCCAGGATGCA-CTGACCACAGAGCGGAGGGCTCCCCCAGACACTGA-GGTCTCCTTTTCTCT-GGACAGAAAACGGGAGTTTGCAGTGGACACCAACATCCCCAGAAGCGTGTACCCTGGAGATTCTAGCGAGGGATGTCAGGACTAACTTGTCATGGGTACTCCAGCCCAAGACCGTGGCTTGCTTCTGCAGTAAGGAGGAGCAGTGTTTGTACAATGAAACCAGCAAAGAGGGCAATTCTTCCCTTGAGGTGAGTAGTGGAGGCTGGGGGAGGCG-----------GGCAAGTGGAG------------------GGATGC i mm10.chr16 C 0 I 2 s canFam3.chr33 2305618 974 - 31377067 AGAGCACCT----CTC-----TCTGGCCCATTTTCTTTCTTTCT------------------CTTTGCG------CCCTTTGGCGC------------------------------------------CAG-GTGGCAGCCTCCCAGGTGCCAGCCAA-----TCAGGAGATTTTCTCCCTCCCTGGGCTCCTCTCCTGAAGAGTGATAGTCTGGGAGCTGCTCTTGT------CTGTCCCCTACTATCAACGATTCTCAACCTGCTGTTTTAAGGAGACTTTC-------CGTAAGAGACAAACCATAAGACACCTTTGGATCAGAAGAGTCCTTGCTGATACGTAGCAGCGTTTCACTGTAGTCTGGTGTCTGAAGGTC----------AAAGGTGCAAGAAGCGGGAGGAGGGTGGG----CAAGAAATCAGGGCCAGGGATGGGGCTGCTGTGAAGGGGAAGCCAGTTTTGCCTACAGGGTAGCCTGGGGAAGCATCAAGGGGATCCTAGCCTTGGGGCCTTATTCTCTGTCCCTCCTAGATGTCCCGTCCCGGTGCAGGCCTGGGCAGGGTTGC--------ATCTCTTCA----GGGGGCAACTGCCTT-CCCTCTCTGGAGTTCCAC-CTGCAATCACTCAGTGGGGCTCATGCTACC----TCCAGCGTGGGGC--GACCAAGATCACTCC-AGG-AAGCCAGCCGAGCTCA-AGGAAATGCCTGATGACTTT--------------GAGGGGTGGCCTGAGAGAGGCAGAGAAAGGCCCACATCAGCTCTC----------------AGGACGTGTCAGACAGCA-AGCAGCCGAGGCCCCCAGCCCT-AACGGTCTTGTCTTCCCTGGGGCAGAGAACGGGACACTGCTGTGGACACCAAAGTCCTTGGAACCATTCACCCTGGAGATTCTAGCAAGAAACGTCAAAGTCAACTTGTCATCTGTGCTCCAGCCAAGGACAGTGGTCTGCGCTTGCAAGGACAGGAGCCAGTGTCTATATAATCAGACGGGCTGGATGGGCAATTCCTCCCTGGAGGTGAGTGAAAGGAGGAGGGTGGGAGGGAGACTTCCTTGTTGAGGGGAAAGGCAGTGGGAACGGAAGCGATGT i canFam3.chr33 C 0 C 0 a score=188408.000000 s hg38.chr3_KI270937v1_alt 37657 92 + 165607 TGTGATTCTGCCTGTCCTGGGTGTGTCTGTGTTGGGAGATGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC s panTro4.chr3_GL389630_random 13110 92 - 103936 TGTGATTCTGCCTGTCCTGGGTGTGTCTGTCTTGGGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGCAGATTCCAGTCTCAGGCCACAAAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816133 92 - 123690457 TGTGATTCTGCCTCTCCTGGGTGTGTCTGTGTTGGGAGGTGGGTGGAGCAGTGGTAGGTGAGTAGAGAAGACTCCAGTCTCAGGCCATAAAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74644 73 - 111706 TGTGATTCTGCCTCTGCTGGGTGTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388058 73 - 192460366 TGTGATTCTGCCTCTGCTGGGTGTGTTGGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308404 73 + 187378091 TGTGATTCTGCCTCTGCTGGGTGTGttggtgttgggaggtgggtggagc-------------------aGATTCCAGTCTCAGGCCATAAAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333231 73 + 91754291 TGTGATTCTGCCTCTCCTGGGTGTGTCTGTGTTGGGAGGTGGGTGGAGC-------------------AGATTCCAGTCTCAGGCCATAAAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73812073 92 + 74750902 CGTGTTTCTGCCTCTCCTGGGCGTGTCTGTGTTGGGAGGTGGGTGGAGCTATGGTAGATGAGTGGAGCGGATACCAGTCTTAGGTCATAAAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32774961 91 + 98207768 TGTGTGTGTTTTCTCCCGGGGAAAGTGTATCTAGGGAGGAGGGTGGAGCTGTGGTGGGTAAGTGGCGCAGGGGCCA-TCTTGGGCTACAAAC i mm10.chr16 I 2 I 468 s canFam3.chr33 2306592 71 - 31377067 -----------CTCGGTGGGAATTGTATGTGTTG----------GGAACCAAGGCAGGGGAGGACAGTCAACCTCaatctcaggccatgaac i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I a score=68319.000000 s hg38.chr3_KI270937v1_alt 37749 26 + 165607 TCACATG-GGAAGAAAGAGAACTTTCT s panTro4.chr3_GL389630_random 13202 26 - 103936 TCACATG-GGAAGAAAGAGAACTTTCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816225 26 - 123690457 TCATGTG-GGAAGAAAGAGAACTTTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74717 26 - 111706 TCACATG-GGAAGAAAGAGAACTTTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388131 26 - 192460366 TCACATG-GGAAGaaagagaactttct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308477 24 + 187378091 TCACA---AGAAGAAAGAGAactttct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333304 26 + 91754291 TCACATG-GGAAGAAAGAGAACTTTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73812165 26 + 74750902 TCACCTG-GGAAGAAAGAGAACttttt i calJac3.chr17 C 0 I 138 s canFam3.chr33 2306663 27 - 31377067 ttacatgtgtaagaaacagaactgtct i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I a score=92129.000000 s hg38.chr3_KI270937v1_alt 37775 50 + 165607 ggccgggtgcagtggctcacgc---ctttaatctc--ag----cacttttggaggctga s panTro4.chr3_GL389630_random 13228 50 - 103936 ggccgggtgcagtggctcacac---ctttaatctc--ag----cacttttggaggctga i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816251 50 - 123690457 ggcctggtgcagtggctcacgc---ctttaatctc--ag----cacttttggaggctga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74743 50 - 111706 ggccgggtgcaggggctcatgc---ctttaatccc--ag----cacttttggaggctga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388157 50 - 192460366 ggccgggtgcagtggctcacgc---ctttaatccc--ag----cacttttggaggctga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308501 50 + 187378091 ggccgggtgcagtggctcatgc---ctttaatcac--ag----cacttttggaggctga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333330 50 + 91754291 ggctgggtgcagtggctcatgc---ctttaatcac--ag----cacttttggaggctga i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2306690 57 - 31377067 --tcacggcttatcgctcaaccgaattttaatcccctagctcccactctgccaggctga i canFam3.chr33 C 0 I 107 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I a score=506261.000000 s hg38.chr3_KI270937v1_alt 37825 323 + 165607 ggcaagcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggcaggcgcctgtagtcccagctactcgggaggctgcggcaggaaaatcgcttgcacccgggaggtggaggttacagtgagccaagattgcgccattgtactccagcctgggcaacagagtgagactctatgtcaaaaagaaaga---aaagaaaagaaaagaaa-----------agaaaagaaagaaa----------gaagg-------agggaaagaaaggaa-aggaaagaaagga--aaggaaagaaa------------------------gggaaag s panTro4.chr3_GL389630_random 13278 332 - 103936 ggcaagcggatcacaaggtcaggagatcaagaccatcctgaccaacatggtggaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcaggtgtctgtagtcccagctactcgggaggctgcggcaggaaaatcgcttgcacccgggaggtggaggttacagtgagccgagattgcgccattgtactccagcctgggcaacagagtgagactctatctcaaaaagaaaga---aaagaaaagaaaagaaagaa--aagaaaagaaaagaaagaaa----------gaagg-------agggaaagaaaggaa-aggaaagaaagga--aaggaaagaaa------------------------aggaaag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816301 294 - 123690457 ggaaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtgaaaccccgtctctactaaaaataccaatattagctgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaaaga---aaag------------------------------gaaagaaa----------gaagg-------aatgaaa-----------aaaggaaagga--aagaaaagtaa------------------------aggaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 74793 355 - 111706 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaaccccatctctactaaaaatacaaaaatcagccgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgagaggcagaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaagagaaagaatgaaaagaaaggaaagaaagaaggaaggaaagaaaggaaaggag----agacagaaaga-------aaagaaagaaagaga-aagaaggaaggaaggaaggaaagag--------------aaagaaaggggaaggaag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388207 366 - 192460366 ggcagacggatcacaaggtcaggagatcgagaccagcctgaccaacatggtggaaccccatctctactaaaaatacaaaaatcagccaggtgtggtggcgggcgcctgttgtcccagctacttgggaggctgaggcaggagaatcgcttgaacgcgggaggcggaggttacagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaaagaatgaaaagaaaggaaagaaagaaggaaggaaagaaaggaaaggagagacagacagaaaga-------aaagaaagaaagaaa-aaaagagagagaaagaaagaaagaaa-------agaaataaagagaaaggaaggaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308551 369 + 187378091 ggcaggcggatcacaaggtcaggagatcgagaccatcctgaccaacatggtggaaccccatctctactaaaaatacaaaaatcagctgggtgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaatgcgggaggcggaggttacagtgagccaagattgcaccactgcactccagcctgggcaagagagtgagactccatctcaaaaagaaagaatgaaaagaaaggaaagaaagaaggaaggaaagaaaggaaaggag----agacagaaaga-------aaagaaagaaagaaa-aggaaggaaggaaggaaagaaagaaagagaaagaaagagaaagaaaggggaaggaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333380 357 + 91754291 ggcaggcggatcacaaggtcaggagatcaagaccatcctgaccaacatggtggaaccccatctctactaaaaatacaaaaactagccgggcgtggtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggttatagtgagccaagattgcgccactgcactccagcctgggcaacagagtgagactccatctcaaaaagaaagaatgaaaagaaaggaaagaaagaaggaaggaaagaaaggaaaagagagacagacagacagacagacagaaagaaagaaagaaagaagaaagaaagaaggaaggaaagaaa------------------------ggggaag i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e canFam3.chr33 2306747 107 - 31377067 I a score=26264.000000 s hg38.chr3_KI270937v1_alt 38148 17 + 165607 ga---gaaaaagaaagaaag s panTro4.chr3_GL389630_random 13610 17 - 103936 ga---gaaaaagaaagaaag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816595 17 - 123690457 ga---gaaaaagagagaaag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75148 20 - 111706 gaaaagaaagagaaagaaag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388573 20 - 192460366 gaaaagaaagagaaagaaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308920 20 + 187378091 gaaggaaaagaaagagaaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333737 20 + 91754291 gaaaggaaagagaaacaaag i chlSab2.chr15 C 0 I 14 s canFam3.chr33 2306854 17 - 31377067 ---GAGACAGAGAGAGAGGG i canFam3.chr33 I 107 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I a score=660.000000 s hg38.chr3_KI270937v1_alt 38165 14 + 165607 aaagaaacta----------------------------------tatt s panTro4.chr3_GL389630_random 13627 48 - 103936 aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaatatt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816612 38 - 123690457 aaagaatgaatgaatgaaagaaagaaactaactt----------tatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75168 14 - 111706 aaagaaactt----------------------------------tatt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388593 14 - 192460366 aaagaaactt----------------------------------tatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308940 14 + 187378091 aaagaaactt----------------------------------tatt i papAnu2.chr2 C 0 C 0 s canFam3.chr33 2306871 14 - 31377067 AGAGAGGGTG----------------------------------CACG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e chlSab2.chr15 91333757 14 + 91754291 I a score=107858.000000 s hg38.chr3_KI270937v1_alt 38179 105 + 165607 ggagaaaaagaagg----------------acgaaagaaagaaaaaggaaggaagg-------------------------------------------aaggaaagag---gaaagaaCcttactt----tattgcttat---------agttcaactggatttttatctcccacctcc s panTro4.chr3_GL389630_random 13675 105 - 103936 ggagaaaaagaagg----------------acgaaagaaagaaacaggaaggaagg-------------------------------------------aaggaaagag---gaaagaaCctttctt----tattgcttat---------agttcaactggatttttatctcccacctcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816650 87 - 123690457 ggagaaaaag------------------------------gaagaaagaaggaagg-------------------------------------------aaggaaagag---gaaagaaC----ctt----tattgcttat---------agttcaactggatttttatctcccacctcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75182 153 - 111706 ggagaaaaagaaag----aagaaagaaggaaggaaggaaagaaaggggaaggaagggaaagaaagag--agaaaaaggaagagagaaagaaaaga----aaagaaagagaaagaaagaaa----ctt----gatcgcttat---------agttcaactggacttttctctcccacctcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388607 159 - 192460366 ggagaaaaagaaagaagaaagaaagaaggaaggaaggaaagaaaggggaaggaaaggaaagaaagagaaagaaaaaggaagagagaaagaaaaga----aaagaaagaaagagaaagaaa----ctt----gattgcttat---------agttcaaccggacttttctctcccacctcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187308954 159 + 187378091 ggagaaaaagaaag----aagaaagaaggaaggaaggaaagaaaggggaaggaagggaaagaaagagaaagaaaaaggaagagagaaagaaaagaaaagaaagaaagagaaagaaagaaa----ctt----gatTGCTTAT---------AGTTCAACTGGACttttctctcccacctcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333771 98 + 91754291 ---------------------------agagagaaagaaagaaaagaaaagaaaagaaaag--------------------------------------aaagaaagagaaagaaagaaa----ctt----gattgcttac---------agttcaaccggacttttctctcccccctcc i chlSab2.chr15 I 14 C 0 s canFam3.chr33 2306885 112 - 31377067 --------------------------CGTGTCgagggggtgcgtgcacaagcagggggagg--------------------------------------aacagaggagggggaaagaat----ctcaacagactcctcactgagcaGCAAgcccaatgggggctccagctcacgaccct i canFam3.chr33 C 0 I 85 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I a score=154974.000000 s hg38.chr3_KI270937v1_alt 38284 83 + 165607 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc---------------ccacagctctgcggcgaagcccagcagagggc s panTro4.chr3_GL389630_random 13780 83 - 103936 ccttctgccaggttggcaggaaacttccacctccgtctttctcacagcgcc---------------ccacagctctgcggcgaagcccagcagagggc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2816737 98 - 123690457 ccttctgccaggttggcaggaaacttccacctcagtctttctcacagtgcccagtggttcccagttccacagctctgcggcaaagcccagcagagggc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75335 97 - 111706 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcccaatggtttccagttccacagctctgtggcaaagctcagcagagggc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388766 97 - 192460366 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcccaatggtttccagttccacagctctgtggcaaagctcagcagagggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187309113 97 + 187378091 cc-tctGCCAGGTTGGCAGGAAGCCTCCACCTCAGTCTTTCTCACAGTGCCCAATGGTTTCCAGTTCCACAGCTCTGTGGCAAAGCTCAGCAGAGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333869 97 + 91754291 cc-tctgccaggttggcaggaagcctccacctcagtctttctcacagtgcccagtggttcccagttccacagctctgtggcaaagctcagcagagggc i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2354689 830 - 202140232 I e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e canFam3.chr33 2306997 85 - 31377067 I a score=13748.000000 s hg38.chr3_KI270937v1_alt 38367 5 + 165607 cctgc s panTro4.chr3_GL389630_random 13863 5 - 103936 cctgc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2355519 5 - 202140232 CCTGC i ponAbe2.chr3 I 830 C 0 s nomLeu3.chr11 2816835 5 - 123690457 cctgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75432 5 - 111706 cctgc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388863 5 - 192460366 cctgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187309210 5 + 187378091 CCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333966 5 + 91754291 cctgc i chlSab2.chr15 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e canFam3.chr33 2306997 85 - 31377067 I a score=1628976.000000 s hg38.chr3_KI270937v1_alt 38372 674 + 165607 ggtgtggggtggaaggtggttgt-gggtccctgggcgtgagtccacacaggtttccatcacagctccgccccacttccccttcagacccagggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttctgaggccgcttacagtcctgtctgcctagaagcaccccacagtcatttctccctaggatgtcatcatcacggtgctgggaagagagctgcgggtccct--ctatcttgacacctccaagcccctttg-ctttctcttttactatctccttccagctaaaagaaacatcttttccagtttggagaaactacttctccatgt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATCTGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTcaccacttacac----------------------------acacacgcatgcacacgcaca----------------------------cacagacacacacacaca--TCCTTCTGAAGCATGAGCAGAGAATGGGTACTCGAAAGGGATAGAGGTAGGGACGGTTGGTGGGGTAGGGGGTAGA-AAAGCATAAAATACACAATGGGAAAA--AGAGATTGAAATCAATATACTATTCCACAGATCCCCAAATATCCACTCTTGGGAGTAG s panTro4.chr3_GL389630_random 13868 675 - 103936 ggtgtggggtggaaggtggtcgt-gggtccctgggcgtgagtccacacaggtttccatcacagctccgccccacttccccttcagacccagggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttctgaggccgcttacagtcccgtctgcctagaagcaccc-acagccatttctccctaggatgtcatcatcacggtgctgggaaaagagctgcgggtgcct--ctatcttgacacctccaagcccctttg-ctttctcttttactatctccttccagctaaaagaaacatcttttccagtttggagaaactacttctccatgt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGCCCTATCTGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAACACAAAACTACCTCCTTCACCACTTacac----------------------------acacatgcatgcacacgcaca----------------------------cacagacacacacacacacaTCCTTCTGAAGCATGAGCAGAGAATGGGTACTTGAAAGGGATAGAGGTAGGGATGGTTGGTGGGGTAGGGGGTAGA-AACGGATAAAATACACAATGGGAAAA--AGAGATTGAAATCAATATACTATTCCATAGATCCCCAAATATCCACTCTTGGGAGTAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2355524 699 - 202140232 GGTGAGAGGTGGAAGGTGGTCGT-GGGTCCCTGGGCCTGGGTCCACACA-GTTTCCATCACAGCTCCGCCCCACTTccccttcagacccagggagaggcactgctgcttctgtgccttgctcaaacacaggacaccttttctgaggccgcttacagtcccgtctgcctagaagcaccccacagccatttctccctaggacgccatcatcacggtgctgggaagagagctgtgggtccct--ctatcttgacacctccaagcccctttg-ctttctcttttactatctccttccagctaaaagaaacatcttttccagtttggagaaactacttctccatgt---ttctagccaagata-cttGGCCTAATTCCACAACTCTTGTCCTATCTGCTTTTTTA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCAGAAAGGAAAGTGTTTATCTGGCAAAACAAAACTACCTCCTTCACCACTTacacacacacac----acacacgcacacgcagacacacacacacacacgcaca----------------------------cacagacacacacacaca--TCCTTCTGAAGCATGAGCAGAGAATGGGTACTTGAAAGGGATAGAGGTAGGGATGGTTGGTGGGGTAGGGGGTAGA-AAAGGATAAAATACACAATGGGAAAAAGAGAGATTGAAATCAATATACTATTCCATAGATCCCCAAATATCCACTCTTGGGAGTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2816840 677 - 123690457 ggtgtggggcggaaggtggtcatggggtccctgggcctgagtccacacaggtttccatcacagctctgccccacttcccc-tcagacccagggagaggctctgctgcttctgtgccttgctcagacaaaggacaccttttctgaggccgcttacagtcccgtctgcctagaagcaccccacagccgtttctccctgggatgc---catcacggtgctggggagagagctgtgggtccct--ctatcttgacacctccaagcccctttg-ctttctcctttactatctccttccagctaaaagaaacatcttttccagtttggagaaattacttctgcatgt---ttctagccaagata-cttggcctaattccacaactcttgtcctatctgctttttta------------tttttatttttggttgtaaaagaagagccagaaagGAAAGTGTTTATCTGGCAACACAAAACTACCTCCCTCACCACTTacacacac------------------------acacacacacacacagacaca----------------------------cacacacacagacacaca--TCCTTCTGAAACATGAGCAGAGAATGGGTACTTGAAAGGGATAGAGGTAGGGATGGTTGGTGGGGTAGGGGGTAGA-AAAGGATAAAATACACAATGGGAAAAAGAGAGATTGAAATCAATATACTATTCCATAGATCCCCAAATATGCACTCTTGGGAGTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 75437 652 - 111706 ggtgtggggtggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatcccagctctgccccacttccccttcagacccagggagaggctctgctgcttctgtgccttgctcagacataggacaccttttacgaggccgcttatggtcctgtctgcctagaagcaccccacagccatttctccctaggatgtcatcatcacggtgctgggaagagagctgctggtcgct--ctatcttgacacctccaagcccctttg-ctttctcttttactctctccctctggctaaaagaaacatctttttcagtttggagaaattacttctccatgt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATCTGCTTTTTAG------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCA-----GAAAGTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCTTTacacacacacac------------------gcacacacacatgcacacgcaca----------------------------cagacacatacacatacacaTCCTTCTGAAGCATGAGCAGAGAATGGGGACTTGAAAGGGATAGAGGTAGTGATGGTTGGTGGGGTGGGGGGTAGA-AAAGGATAAAATACACAATGGGAAAAAGACAGATTAAAATCAATCTACTATTCT-------------------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192388868 652 - 192460366 ggtgtggggtggaaggtggtcatggggtccctgggcatgagtccacacaggtttccatcccagctctgccccacttccccttcagacccagggagaggctctgctgcttctgtgccttgctcagacataggacaccttttacgaggccacttacggtcctgtctgcctagaagcaccccacagccatttctccctaggatgtcatcatcacggtgctgggaagagagctgctggtcgct--ctatcttgacacctccaagcccctttg-ctttctcttttactctctccctctggctaaaagaaacatcttttccagtttggagaaattacttctccatgt---ttctagccaagata-tttggcctaattccacaactcttgtcctatgtgctttttaa------------tttttatttttggttgtaaaggaagagcca-----gaaagTGTTTATCTGGCAACACAAAACCACCTCCTTCACCCTTTacacacacacac----------------atgcacacacacatgcacacacaca----------------------------cagacacatacacatacacaTCCTTCTGAAGCATGAGCAGAGAATGGGGACTTGAAAGGGATAGAGGTAGTGATGGTTGGTGAGGTGGGGGGTAGA-AAAGGATAAAATACACAATGGGAAAAAGACAGATTAAAA--AATCTACTATTCT-------------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187309215 654 + 187378091 AGTGTGGGGTGGAAGGTGGTCATGGGGTCCCTGGGCATGAGTCCACACAGGTTtccatcccagctctgccccactTCCCCTTCAGACCCAGGGAGAGGCTCTGCAGCTTCTGTGCCTTGCTTAGACATAGGACACCTTTTACGAGGCCGCTTATGGTCCTGTCTGCCTAGAAGCACCCCACAGCCATTTCTCCCTAGGATGTCATCATTACGGTGCTGGGAAGAGAGCTGCTGGTCGCT--CTATCTTGACACCTCCAAGcccctttg-ctttctcttttactCTCTCCCTCTGGCTAAAAGAAACATCTTTTTCAGTTTGGAGAAATTACTTCTCCATGT---TTCTAGCCAAGATA-CTTGGCCTAATTCCACGACTCTTGTCctatctgctttttaa------------tttttatttttggttgtaaAGGAAGAGCCA-----GAAAGTGTTTATCTGGCAACACAAAACCACCTCCTTCaccctttacacacacacac----------------acgcacacacacatgcacacacaca----------------------------cagacacatacacatacacatcctTCTGAAGCATGAGCAGAGAATGGGGACTTGAAAGGGATAGAGGTAGTGATggttggtggggtggggggtaga-aaaggataaaatacacaatgggaaaaagacaGATGAAAATCAATCTACTATTCT-------------------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91333971 698 + 91754291 ggtgtggggtggaaggtggtcgtggggtccctgggcatgagtccacacaggttcccatcgcagctctgccccactttcccttcagacccagggagaggctctgctgcttctgtgccttgctcagacacaggacaccttttacgaggccgcttacggtcctgtctgcctagaagcaccccacagccatttctccctaggatgtcatcatcacggtgctgggaagagagctgctggtggcc--ctatcttgacacctccgagcccctttg-ctttctcttttactctctccctctggctaaaagaaacatctttttcagtttggagaaattacttctccatgt---ttctagccaagata-cttGGCCTAATTCCACGACTCTTGTCCTATCTGCTTTTTAA------------TTTTTATTTTTGGTTGTAAAGGAAGAGCCA-----GAAAGTGTTTATCGGGCAACACAAAACTGCTTCCTTCACCCCTTGcacacacacacacgcacacacgcacacacgcacacacacatgcacacacacatgcacatacacgcacacgcacacacgtgcacacacagacacatacacaTCCTTCTGAAGCATGAGCAGAGAATGGGAACTTGAAAGGGATAGAGGTAGTGATGGTTGGTGGGGTGGGGGGTAGA-AAAGGATAAAATACACAATGGGAAAAAGACAGATTAAGATCAATCTACTATTCT-------------------------------- i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2307082 651 - 31377067 GGTgggggagggaggcc--tcctgtggtccctgggcacgtgcctacaca-gctcaca----ggcgccgtgctccctcctcttcaggcccagggaggtgctccatggcttcggtgctttgctcagacacggggcaccttttataaggcgcccta-ggctgcgtctgcctacaagcaccacacgcctatttctctctgggctctcctcgttgtggcgttgggaagaggggtgtaggtcccctatgatgttgacgcccctacaccccttcgtttttctcttctactgtctccttccagctaaaagaaggatctttt-cattttagagaCTATCTTGGTGCATGCCGGTTCTAACCACGACAGTTTGGCCTTAGTCTATCCATCCTGCCCCATTTGCTTTTTTAAAAACTTTGTTTTGTTTTGTTTGGGTTGTAAAGCAGGAGCCATAAAGGGGAGTGTTTGGCTGGCGATACCCCACCGCCCCGCTCGCTCCTTACAC--------------------------------------CTACAGGCGCC----------------------------C-------------------TTCTCGGGAAGCACGATC-GAGCATTCCCACCGGGAAGGGGTAGAGGTGGAG---------GAGCCCGGGGGCAGAGAGGGGACAAGACACAGACGAGGAAAAACAGAGATTGGCATCAATGTATTAGTTTAGGTGTCCCCAGATGTCCAGTCCTGGAAGTAG i canFam3.chr33 I 85 I 4 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I a score=12231.000000 s hg38.chr3_KI270937v1_alt 39046 23 + 165607 CAAGTGTTAGAGGATTCCATTTT s panTro4.chr3_GL389630_random 14543 23 - 103936 CAAGTGTTAGAGGATTCCATTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2356223 23 - 202140232 CAAGTGTTAGAGGATTCCATTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2817517 23 - 123690457 CAAGTGTTAGAAGGTTCCATTTT i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73812191 138 + 74750902 I e canFam3.chr33 2307733 4 - 31377067 I e chlSab2.chr15 91334669 0 + 91754291 C e papAnu2.chr2 187309869 0 + 187378091 C e macFas5.chr2 192389520 0 - 192460366 C e rheMac3.chrUn_JH291127 76089 0 - 111706 C a score=1875621.000000 s hg38.chr3_KI270937v1_alt 39069 670 + 165607 AGGGAGATTCCCCGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGCGCAGGGAGCTTGGTGAGGTCTCGGCGCCGCAGCCTTTGCTGAGCTGCTGTACTGGCTGCTGTGTTTTCTCACAGTGCTCAGCAGGGAGGCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAGGTC--AATTTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtaggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcacaagaattgctttaacttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcat-------taaaaaaaaaagcagaagaaaaatacaaaaattagtgggcgtggtggtgcatgcctgtagccccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataaggaaTCCAGTTTTCAAGCAATAGGaca s panTro4.chr3_GL389630_random 14566 669 - 103936 AGGGAGATTCCCCGAGTCGCTTCAGT--AAGGGAGTTAGAAAGGGGAGC-CAGGGAGCTTGGTGAGGTCTCGGCGCCGCAGCCTTTGCTGAGCTGCTGTACTGGCTGCTGTGTTTTCTCACAGTGCTCAGCAGGGAGTCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAGGTC--AATTTCAGCTTATATGAAATCCAGTTTGCAGGCCACACAggagcctgaggcaggcggattgcttgagctcaggactttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaatcagctgggcgtggtggcatatgcctgtaatctcaagtatttgggaggctgaggcacaagaattgctttaacttgggagggggacattgcagtgagccgagatcgagacactgcactgcagcgtgggaaacagaacgaga--ctgtctcat-------aaaaaaaaaaagcagaagaaaaatacaaaaaTTAGTgggcgtggtggtgcatgcctgtagccccagctcctc------gggaggct--gaggtgggaggatggc--ttgaacttgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggcaaccgagtgggaccctgtctca--------aaataaataaggaaTCCAGTTTTCAAGCAATAGGaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2356246 677 - 202140232 AGGGAGATTCCCTGAGTCGTTTCAGT--AAGGGAGTTAGAAAGGGGAGCGCAGGGAGCTTGGTGAGGTCTCGGAGCTGCAGCCTTTGCTAAGCTGTTGTTCTGGCTGCTGCGTTTTCTCACAGTGCTCAGCAGGGAGGCTCTGTCTTCTTGGTTTGGGAGTCAGCAAGGGAGGTC--AATTTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtaggagcctgaggcaggcggattgcttgagctcagaagtttgagaccagcctgggcaatatggcaagaccctgtctctactaaaaatcaaaaaattagctgggtgtggtggcatatgcctgtaatctcaactattggggaggctgaggcacaagaactgctttaacttgggagggggacattgcaatgagccgagatcgagacactgcactgcagcctgggaaacagaacgaga--ctgtctcattagaaaaaaaaaaaaaaagcagaagaaaaatacaaaaatgagtgggcgtggtagtgcacgcctgtagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggcgttttcagtgagccaagatcaagacattgcactccaggctgggcaacagagtgggaccctgtctca--------aaataaataaGGAGTCCAGTTGTCAAGCAATAGGaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2817540 671 - 123690457 AGGGAGATTCCCTGAGTCGATTCAGT--AAGGGAGTTAGAAAGGGAAGTGCAGGGAGCTTGGTGAGGCCTGGGCGCCGCAGCCTTTGCTGCGCTGTTGTTCTGGCTGCTGCGTTTTCTCACAGTGCTCAGCAGGGAGGCTCTGTGTTCTTGGTCTAGGAGTCAACAAGGGAGGTC--AATTTCAGCTTCTATGGAATCCAGTTTGCAGGCCACACAggagcctgaggcaggcggattgcttgagctcaggactttgagatcagcctgggcaatatggcaagaccgtgtctctactaaaaatcaaaaaattagctgggcgtgttggcatatgcctgtaatctcaactatttgggaggctgaggcacaagaattgctttaacttgggcgggggacattgcaatgagccgagatcgagacactgcactgcagcctgggaaacagaatgaga--ttgtctcatt------aaaaaaaaaaagcagaagaaaaatacaaaaaTTAGTgggcgtggtggtgcatgcctgtagtcccagctcctt------gggaagct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccaagatcaagacattgcactccagcctgggtgacacagtgggaccctgtctca--------aaataaataaggaaTCCAGTTTTCAAGCAATAGAaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 76089 669 - 111706 --GGAGCTGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGAGCGTGGGGAGATATTGGAGCCACAGCCTTTGCTGGGCTGTTGTTCTGGTTGCTGTGTTTTCT--CAGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGGGTCAGCAAGGGAGGTCAAAATGTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtagaagcctgaggcaggtggattgcttgggctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcgagacattacactgcagcctggaaaacagaacgaga--ctgtctcat----------aaaaaaaagaaaaagaaaaatacaaaaaTTAGTgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacatagtgcgaccctgtctca----aaataaataaataaggaaTCCAGTTTTCAAGCAATAGtaca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192389520 669 - 192460366 --GGAACTGCCCCGAGTTGCTTCAGT--AAGGGAGTTAGAAAGGGGAGTGCAGGGAGCGTGGGGAGATATTGGAGCCACAGCCTTTGCTGGGCTGTTGTTCTGGTTGCTGTGTTTTCT--CAGTACTTAGCAGGGAGGTTCCGTCTTCTTGGTTTGGGAGTCAGCAAGGGAGGTCAAAATGTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatgtgaagacgctgtctctaataaaaatcaaaaaattagctgggcatggtggcatatgcctgtaatcccagctatttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcaagacattacactgcagcctggaaaacagaacgaga--ctgtctcat----------aaaaaaaagaaaaagaaaaatacaaaaattagtgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacatagtgcgaccctgtctca----aaataaataaataaGGAATCCAGTTTTCAAGCAatagtaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187309869 669 + 187378091 --GGAGATGCCCCGAGTTGCTTCAGT--AAGGGAGTTGGAAAGGGGAGTGCAGGGAGCGTGGGGAGATATTGGAGCCACAGCCTTTGCTGGGCTGTTGTTCTGGTTGCTGTGTTTTCT--CAGTACTTAGCAGAGAGGTTCTGTCTTCTTGGTTTGGGGGTCAGCAAGGGAGGTCAAAATGTCAGCTTCTATGAAATCCAGTTTGCAGGTCacacaggagcctgaggcaggtggactgcttgagctcaggactttgagaccagcctgggcaatatgtgaagacgctgtctctactaaaaataaaaaaatgagctgggcatggtggcatatgcctgtaattccagctctttgggaggctgaggcacaagaattgctttaactcaggagggggacattgcagtgagccgagatcgagacattacactgcagcctggaaaacagaacgaga--ctgtctcat----------aaaaaaaagaaaaagaaaaatacaaaaattagtgggcatggtagtacatgcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtagagtttgcagtgagccgagatcaagacactgcactccagcctgggtgacagagtgtgaccctgtctca----aaataaataaataaggaatccAGTTTTCAAGCAatagtaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91334669 674 + 91754291 --GGAGATGCCCCAAGCTGCTTCAGTAAAAGGGAGTTAGAAAGGGGAGGGCAGGGAGCTTGGTGAGATATTGGAGCCACAGCCTTTGCTGGGCTGTTGTTCTGGTTGCTGCGTTTTCT--CAGTACTTAGCAGGGAGGTTCTGTCTTCTTGGTTTGGGGGTCAGCAAGGGAGGTCAAAATGTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtaggagcctgaggcaggtggattgcttgagctcaggacttcgagaccagcctgggcaatatggcaagatgctgtctctactaaaaatcaaaaaattagctgggcgtggtggcatatgcctgtaatcccagctatttgggaggctgaggtacaataattgctttaactcgggagggggacattgcagtgagctgagatcgagacactgcactgcagcctggaaaacagaacaaga--ctgtctcat-----------aaaaaaagaaaaagaaaaatacaaaaaCTGGTgggcatggtggtacaagcctatagtcccagctcctc------aggaggct--gaggtgggaggatggc--ttgaacctgggaggtggagtttgcagtgagctgagatcaaaacactgcactccagcctgggcgacggagtacgaccctgtctcaaaataaataaataaataaGGAGTCCAGCTTTCAAGCAACAGAaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73812329 671 + 74750902 aGGGAGATTCCCTGAGTCGTTTCAGT--AAGGGAGTTAGAAAGGGGAGT-CTGGGAGCTTGGTGA---------ACCACGGCCTTTGCTGGGCTGTTGTTCTGGTTGCTGCATTTTCTTACGGTGCTTAGCAGGGAGGCTCTGTCTTCCTGGCTCGGGAGTCAGCAAAGGAGGTCAAAACTTCAGCTTATATGAAATCCAGTTTGCAGGCCACAtgggaggctgaggcaggcagattgcttgagctcaggacttcgagaccagcctgggcaatatgaccagaccccatgtctactaaaaatcaaaaaattagctgggcatggtggcacgtgcctgtaatcccagcttttcgggaggctgaggcacaagaattgctttaactcgggaggtggacgttgcagtgagccgatattgaaacactacactccagcg-gggcaacagaatgcgactctgtctcat-------------aaaaaaaaaaagaaaaatacaaaaa---GTgggcataatagagcatgcctgtagtcctggcccctccctagtgggaggatgggaggcgggaggatagcttttgagcct-ggaggcggaggttgcagtgagcagagatcaagacactgcactccaacctgggtgacagagtgagaccctgtctcaaaataaataaataaaTTAGGAATCCAGTTTTCAAGCAATAGTAGA i calJac3.chr17 I 138 C 0 e mm10.chr16 32775052 468 + 98207768 I e canFam3.chr33 2307733 4 - 31377067 I a score=19131.000000 s hg38.chr3_KI270937v1_alt 39739 11 + 165607 tacatggatac s panTro4.chr3_GL389630_random 15235 11 - 103936 tacatggatac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2356923 11 - 202140232 tacatggatac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2818211 11 - 123690457 tacatggatac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 76758 11 - 111706 tacacacatac i rheMac3.chrUn_JH291127 C 0 I 3 s macFas5.chr2 192390189 11 - 192460366 tacacacatac i macFas5.chr2 C 0 I 3 s papAnu2.chr2 187310538 11 + 187378091 tacacacatac i papAnu2.chr2 C 0 I 3 s chlSab2.chr15 91335343 11 + 91754291 tacatacatga i chlSab2.chr15 C 0 I 3 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73813000 0 + 74750902 C e canFam3.chr33 2307733 4 - 31377067 I a score=137564.000000 s hg38.chr3_KI270937v1_alt 39750 133 + 165607 atacacacatggatacatacacacatg-------------------gatacacaca--tatggatacatacatggatacatgcatacatgcatg-acacacacatacatacatgg---atacatacatggatacatacat---tgatacatatctacatgg s panTro4.chr3_GL389630_random 15246 136 - 103936 atacacacatggatacatacacacatg-------------------gatacacacacatatggatacatacatggatacatgcatacgtgcatggatacacacatacatacatgg---atacatacatggatacatacat---tgatacatctctacatgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2356934 130 - 202140232 atatacacatggatacatacacatatg-------------------gatacatacatggatacatacacacatggatacatgtatacatggata--------catacacatatgg---atacatacat-gatacatacatacatgatacatggatacacat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2818222 96 - 123690457 atacacacatggatgcatacacacatg-------------------gatacatacacatatggatacatac--------------acatggata--------catacacacacgg---atacatacacggatacatacac--------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 76772 153 - 111706 atacatacattgatacatacatacatg------atacacatacatggatatatacatacattcatacatacatggatacatacatacatacatggatacatgcatacatacatgatacatacatacattgatacatgcat--acgatacatacatgcatgg i rheMac3.chrUn_JH291127 I 3 C 0 s macFas5.chr2 192390203 149 - 192460366 atacatatattgatacatacatacatg------atacacatacatggatatatacatacattgatacatacatgg----atacatacatacatggatacatgcatacatacatgatacatacatacattgatacatgcat--acgatacatacatgcatgg i macFas5.chr2 I 3 C 0 s papAnu2.chr2 187310552 151 + 187378091 atacatacattgatacatacatacatacatgatacacacatacatggatatatacatacattgatacatacatggatacatacatacatacatggatacatacatacatg--------atacatacattgatacatgcat--atgatacgtacatgcatgg i papAnu2.chr2 I 3 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73813000 0 + 74750902 C e canFam3.chr33 2307733 4 - 31377067 I e chlSab2.chr15 91335354 3 + 91754291 I a score=99663.000000 s hg38.chr3_KI270937v1_alt 39883 77 + 165607 atacatacat----g-atacatacacacatggatacacacatggatacatac----atgcatacatgcatggatacacacatacat s panTro4.chr3_GL389630_random 15382 73 - 103936 atacatacat----g-atacatacacacatggatacacacatggatacat--------gcatacatgcatggatacacacatacat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2357064 81 - 202140232 atacatacat----gaatacatacacacatggatacatacatggatacatacat-gatacatacatacatggatacacatatacat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2818318 57 - 123690457 --acatacgt----ggatacatgcatgcatagatacacacatg--------------------catacatggatacacacata--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 76925 85 - 111706 atacatacacacatggatacatacatacatga-tacatacattgatacatacgtggatatatacgtgcatggatatatacacacat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390352 83 - 192460366 atacatacacac--ggatacatacatacatga-tacatacattgatacatacgtggatatatacgtgcatggatatatacacacat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187310703 81 + 187378091 atacctgcat----ggatacatacatacatga-tacatacattgatacatacgtggatacatacatgcatggatatatacacacgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335357 70 + 91754291 atacatgca-----tgatacatacatacatgg----atac----atacatacatggttacatacatgcatggatacatacatg--- i chlSab2.chr15 I 3 C 0 e mm10.chr16 32775052 468 + 98207768 I e calJac3.chr17 73813000 0 + 74750902 C e canFam3.chr33 2307733 4 - 31377067 I a score=17639.000000 s hg38.chr3_KI270937v1_alt 39960 15 + 165607 acatggatacataca s panTro4.chr3_GL389630_random 15455 15 - 103936 acatggatacataca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2357145 15 - 202140232 acatgaatacataca i ponAbe2.chr3 C 0 I 327 s rheMac3.chrUn_JH291127 77010 14 - 111706 g-atacatatataca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390435 14 - 192460366 g-atacatatataca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187310784 14 + 187378091 g-atacatatataca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335427 9 + 91754291 ------atacacaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813000 15 + 74750902 ACATGCATACATACA i calJac3.chr17 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e canFam3.chr33 2307733 4 - 31377067 I e nomLeu3.chr11 2818375 0 - 123690457 C a score=136787.000000 s hg38.chr3_KI270937v1_alt 39975 68 + 165607 tacatggatacatacatctatacatggata----cattca-ttcattcattcatgc-ttcaatcattcatgcat s panTro4.chr3_GL389630_random 15470 48 - 103936 t----------------ctatacatggata----cattca-ttcattcat----gc-ttcaatcattcatgcat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2357487 68 - 202140232 tacatggatacatacatatatacacggata----cattca-ttcattcatTAATGC-TTCAATCATTCATGCAT i ponAbe2.chr3 I 327 C 0 s nomLeu3.chr11 2818375 50 - 123690457 ------------------tgtacatggata----cattca-ttcattcattaatgc-ttcaatcattcatgcat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77024 68 - 111706 tacatggatacatacatagatacatggata----cattca-ttcattcatTAATGC-TTCAATCATTCACGCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390449 68 - 192460366 tacatggatacatacatagatacatggata----cattca-ttcattcatTAATGC-TTCAATCATTCACGCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187310798 68 + 187378091 cacatggatacatacatagatacatggata----cattca-ttcattcattaatgc-tTCAATCATTCACGCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335436 72 + 91754291 tgcatggatacatacatacatacacggatacattcattca-ttcattcattaatgc-ttcaatcattcatgcat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813015 50 + 74750902 --------------------TACACGTACA----CACTCATttcattcatgcattcagtcaatcattcattcat i calJac3.chr17 C 0 C 0 e mm10.chr16 32775052 468 + 98207768 I e canFam3.chr33 2307733 4 - 31377067 I a score=34537.000000 s hg38.chr3_KI270937v1_alt 40043 10 + 165607 CCCCCATCTT s panTro4.chr3_GL389630_random 15518 10 - 103936 ATCCCATCTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2357555 10 - 202140232 CCCCCATCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2818425 10 - 123690457 CCCCCATCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77092 10 - 111706 CCCCTGTCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390517 10 - 192460366 CCCCCGTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187310866 10 + 187378091 CCCCCGTCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335508 10 + 91754291 CCCCCGTCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813065 10 + 74750902 CCCCTGTCTT i calJac3.chr17 C 0 C 0 s mm10.chr16 32775520 10 + 98207768 CCCCTATCTT i mm10.chr16 I 468 C 0 e canFam3.chr33 2307733 4 - 31377067 I a score=1347231.000000 s hg38.chr3_KI270937v1_alt 40053 406 + 165607 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAGGGGGTCAGGGT-AAACAATGACCCAGGGAGGCCAGCTGGGCAGGACTACCGTGTGGCTTTAGGCAGGGCCTTGCCGCCCCACGGCCTGGTCAAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----CAGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AGTCAGAAACACCCAGAAGCCCTTCCCAGTTTGGTCTCCTGGCCGCCC-GTGATCGGCAACCCTCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGC s panTro4.chr3_GL389630_random 15528 406 - 103936 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCGGGTGCAGG-GCCAGGCAGGGGGTCAGGGT-AAACAATGACCCAGGGAGGCCAACTGGGCAGGACTACCGTGTGGCTTTAGGCAGGGCCTTGCCGCCCCACGGCCTGGTCAAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----CAGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AGTCAGAAACACCCAGAAGCCCTTCCCAGTTTGGTCTCCTGGCCGCCC-GTGATCGGCAACCCTCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGGGCTCCGAGGATGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCACTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2357565 406 - 202140232 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAGGTGGTTAGGGT-AAACAATGACCCAGGGAGGCCAACTGGGCAGGACTACCGTGTGGCTCTAGGCGGGGCCTTGCTGCCCCACGGCCTGTTCAGGAATGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAT-GACT----CAGGGTCCACGGGTTCTCAAGCCAAAGGGGTC--AGTCATAAACACCCACAAGCCCTTCCCAGTTTGGTCTCCTGGCCACCC-GTGATCAGCAACCCTCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGATACTGCCAGTGCATATAGGATGTCTGTGAGGAGCAGTGCTTCCCGAGAGTCCACTGC i ponAbe2.chr3 C 0 M 1691 s nomLeu3.chr11 2818435 409 - 123690457 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCCGGTGCAGG-GCCAGGCAGGGGGTCAGGGTAAAACAATGACCCAGGGAGGCCAACTGGGAAGGACTACTGTGTGGCTTTAGGCAGGACCTTGCAGCCCCACGGCCTGGTCAAGAAGGTGCTCAGCAGGTGCTGGTGGGGCTGAGACAC-AAAT----CAGGGTCCACGGGTTCTCAGGCCAAAGGGGTCAGAGTCAGAAACACCCAGAAGCCTTTCTCAGTTTGGTCTCCTGGCCGCCC-GTGATCAGCAACCCTCCTCCAGGTGGCTGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCGAGGATGCCTGTGAGGAGCCGTGCCTCCCGAGTGTCCGCTGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77102 406 - 111706 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAAGGAGTCGGAGT-AAATAATGAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGGCTTT----AGGGCCTTGCAGCCCCAGGGCCTGGTCAAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGCAGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AGTCAGAGACAGCCAGAAGCCCTTACCAGTTTGGTCTCCTGGCCGCCC-GTGATCAGCAACCTTCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCACTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390527 406 - 192460366 ACTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAAGGAGTCGGAGT-AAATAATGAACCAGGGAAGCCAAATGGGCAGGACTACCGTGTGGCTTT----AGGGCCTTGCAGCCCCAGGGCCTGGTCAAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGCAGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AGTCAGAGACAGCCAGAAGCCCTTACCAGTTTGGTCTCCTGGCCGCCC-GTGATCAGCAACCTTCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCACTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187310876 406 + 187378091 ACTCTAGAAAGGATTTCAGGCAAAGAGCGAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAAGGAGTCGGGGT-AAATAATGAACCAGGGAGGCCAAATGGGCAGGACTACCGTGTGGCTTT----AGGGCCTTGCAGCCCCAGGGCCTGGTCAAGAAGATACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGCAGGGTCCACGGGTTCCCAGGCCAAAGGGGTC--AGTCAGAGACAGCCAGAAGCCCTTACCAGTTTGGTCTCCTGGCCGCCC-GTGATCAGCAACCTTCCTCCAGATGGCCGGCTGCAAGTGTGACGGGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335518 410 + 91754291 CCTCTAGAAAGGATTTCAGGCAAAGAGCTAGAGTGTGAGAGGGAAGAGGCTGAGATCCTGGTGCAGG-GCCAGGCAGGGAGTCAGGGT-AAATAATGAACCAGGGAGGCCAAATGGGCAGGAGCACCGTGTGGCTTTAGGCAGGGCCTCGCAGCCCCAGGGCCTGGTCAAGAAGGTACTCACCAGGTGCTGGTGGAGCTGAGACAT-GACTCAGGCAGGGTCCACGGGTTCTCAGGCCAAAGGGGTC--AGTCAGAAACACCCAGAAGCCCCTACCGGTTTGGTCTCCTGGCCGCCT-GTGATCAGCAACCTTCCTCCAGATGGCCGGCTGCAAGTGTGATGCGGGCACCTTCGGCCGCTACTGCGAGCGCTCCAAGGACGCCTGTGAGGAGCCGTGCTTCCCGAGTGTCCGCTGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813075 405 + 74750902 ACTCTAGAAAGGATTTTAGGCAAGGAGCTAGAGTGCGAGAGGGAAGAGGCTGAGCTCCTGTTGCAGG-ACCAGTCAGGGGGTCAGCAT-AAACAATGACCCAGGGAGGCCGGATGGGCAGCACTGCCGTGTGGCTTTAAACAGGGCCTTGCAGCCCCCAGGCACGGTCAAGACGGTGCTCAGTAGGTGCTGGAGGAACTAAGACAT-GACT----C--GGTCCCCGGGTTCTCAAGCCAGAGGGATC--CGTCAGAAACACCCAGAAGCCCTTACTACTTTGGCTTCCTGGCTACCCTGTGATCAGCAACCCTTCTCCAGGTGGCTAGCTGCAAGTGTGACAGGGGCACCTTCGGCCACTACTGCGAGCGCTCTGCGGACGCCTGTGAGGAGCCATGCTTTCCAAATGTCAGCTGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32775530 320 + 98207768 GCTCTACCAAGGATTCCAGAGAAGGAGGTATGCTCTGAGAGAGGCGAAGCTGAGAGCCTGCTACAGG-GCCAGGCGGGGGAT-----T---------------------------------------GTGTAGCTTTGGGAAGGTACTCACAGTCTT--GGCCTGTTCAGGAC-----------GGTGCTGGAGGGACTGAGACAG---------CGGGGC-------TTCTCATGACAGAAGTGTC--AG---------GGCAGGTGGTCTT--CAGCTTG------TGGACACCA-GCAGCC--CTGCTGTCATTCAGGTGACCAGCTGCAAGTGTGATGGGGACACCTTTGGCCGCTTGTGTGAACGCTCCAAGGACCCGTGTGATGAGCCATGCTTCCCTAACGTGAACTGC i mm10.chr16 C 0 C 0 s canFam3.chr33 2307737 353 - 31377067 ACTCTAAGAAGGGGTTCGGGCAAGGAGATGTGGTGCG-----------GCTGGGGTCCCAGGGCTGGCACCGGGCAGAGCGGTCGGGG-AGAGAACCGTCCAGCGAGGC----------------CCAGGGGGCTCGGAGCAGGACCACAGCGGGCTCCGGC--------------GCTCGGCACGTGCTGGCAGGATCGGGACGGGGACT----CGGAGTCTGTGGGTTCCCAGGCCCGGGGTGGG--GGGCGCAGAAACACGG--------------TCGGTCTCCCGGCTGCGCAGTAACCAGCCACCCAT-TCCAGGTGGCCCGCTGCAGGTGTGGCTCCAGCACCTTTGGCCACTACTGCGAGCGCTCCAGGGACCAGTGCGAGGCGCCGTGCTTCGCGGGTGTGGCCTGC i canFam3.chr33 I 4 C 0 a score=466051.000000 s hg38.chr3_KI270937v1_alt 40459 162 + 165607 GTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAGCCGGGAACAGGGCCTGGAGCAGGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGACAGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA s panTro4.chr3_GL389630_random 15934 162 - 103936 GTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCGGGTGAGCCGGGAACAGGGCCTGGAGCAGGCGCTTCTGGGAGCAGCTGATAGCTCAAGGGTGTAGACGGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2818844 162 - 123690457 GTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAAACCTGACTGGGGATGGGCGGCACTGTGCCGGTGAGCCGGGAACAGGGCCTGGAGGAGGCACTTCTGGGAGCAGCTGACAGCTCAAGGGTGTAGACAGCCAAAGGCAAACCATTTCTCTCCTTTTTCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77508 162 - 111706 ATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGTGCTGGTGAGCCGGGAACAGGGCCTGGAGGAGGGACTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGACAGCCAAAGGCAAACTATTTCTCTCCCTTCTCCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192390933 162 - 192460366 ATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCATACCTGACTGGGGATGGACGGCACTGTGCTGGTGAGCCGGGAACAGGGCCTGGAGGAGGGACTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGACAGCCAAAGGCAAACTATTTCTCTCCCTTCTCCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187311282 162 + 187378091 ATTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCACACCTGACTGGGGATGGACGGCACTGTGCTGGTGAGCCGGGAACAGGGCCTGGAGGAGGGGCTTCTGGGAGCAGCTCACAGCTCAAGGGTGTGGACAGCCAAAGGCAAAccatttctctcccttctccg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91335928 160 + 91754291 ATTCCTGGGAAGGGCTGCGGGGCCTGCCCTCCACACCTGACTGGGGATGGGCGGCACTGCGCTGGTGAGCCGGGAACA-GGCCTGGAGGAGGGGCTTCTGGGAGCAGCTCACAGCTCAAGGCTGTAGACA-CCAAAGGCAAACCATTTCCCTCCCTTTTCCG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813480 162 + 74750902 GTTCCTGGGAAGGGCTGCGAGGCCTGCCCTCCAGACCTGACCGGGGATGGGCGGCACTGTGCCGGTGAGCTGGGAGCAGGGCCTGGAGGAGGGACATCTGGGGACAGGTGGTAGCTCAAGTGTGGTGACAGCCACAGGTAATCTCTTTCTCTCCCTTTTCCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32775850 140 + 98207768 ATTCCTGGGAAGGGCTGTGAGGCCTGCCCTCCAAACACAACTGGAGATGGACGTCATTGTGCAGGTGAGTGTGGGACAGGGCCCTGGCAAGAGG-----AGGTCCAGGTGATTGGTCAAGGGTCCTGGTG-----------------TTTCTGTCTTTAGCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2308090 159 - 31377067 GTCCCCGGGAGGGGCTGCGAGGCCTGCCCCCCGCACCTGACGGGCGACGGGCGTCACTGTGCAGGTAAGCGGGGACCTGCCCTGGCAGGAGCACGGCCTGGGGACAGTTGACACCGGGAGGGCCTGG--GGCCTGGGACCAACC-TTTGTCTCCCTTCTCCA i canFam3.chr33 C 0 I 151 e ponAbe2.chr3 2357971 1691 - 202140232 M a score=1184357.000000 s hg38.chr3_KI270937v1_alt 40621 567 + 165607 GCAGATCTTTAGAATGCTC-------------AATCTAGGCAGGTGT-------------------GGGAAATCTAGGCAGGTGTGGGAAATCATCTAGGCAGGTATGGGAAATCTAGGCAGGCCTGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGGTTGTACAGGCATAGGGGAGGGGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGGAGCCCCGGGCGAAAGACTGAAGATGGTTT-----GGGGAGGAGACTTCAGCAGCCGCCAGAGAACCGGGCAAGCTGGGTCCTCGGGATCCCTGGGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCATCTGTTCCTCCCGCTCTGAGTCACCAGAGTC-TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCACCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTTTTATAAAGGCAGAAAAGGAGAT s panTro4.chr3_GL389630_random 16096 526 - 103936 GCAGATCTTTAGAATGCTC-------------AATCTAGGCAGGTGT-------------------GGGAAATCTAGGCAGG-----------------------------------------CCTGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGGTTGTACAGGCATAGGGGAGGGGACGGGGCT-GGGCATCCCTGAGGCATTGATGGGGGAAGCCCGGGGCGAAAGACTGAAGATGGTTT-----GGGGAGGAGACTTCAGCAGCCGCCAGGGAACCGGGCAAGCTGGGTCCTCGGGATCCCTGGGGATCTTCAGAGACACGAGGCTCAGGATCTCTGCATCTCACGAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCATCTGTTCCTCCCGCTCTGAGCCACCAGAGTC-TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCACCCAAATAAAATCTACAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTTTTATAAAGGCAGAAAAGGAGAT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819006 451 - 123690457 GCAAATCTTTAGAATGCTC-------------AATCTAGGCAGGTAT-------------------GGGAAATCTAGGCAGG-----------------------------------------CCTGGAAAGGGGGTGGTGGATGGTGTGGGGCTGAAGGAGAAGAGGTTGTACAGGCATAGCGGAGGGGACGGGGCT-GAGCATCCCTGAGGCATTGATGGGGGGAACCCCGGGCAAAAGACTGAAGATGGTTTGGCCAGGGGAGGAGACTTCAGCAGCT-CCAGGGAACCGGGCAAGCTGGGTCCTCG-----------------------------------------------------------------------------GTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCT--TCCCAGCCATCTGTTCCTCCCGCTCTGAGCCACCAGAGTC-TGATGAGGGAGATCACAGCGAGGCCTTTACCAAGCCCCCTAAGGCACCCAAATAAAATCTACAGATCACTGCG--TTCAGAGCCGAGGCCAGAGTGGGTAGAACCGCAGCTGTTATAAAGGCAGAAAAGGAGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 77670 563 - 111706 GCAAGCCTTTAGAATGCACAATCTAGGTAGGTAATCTAGGCAGGTAT-------------------GGGAAATCTAGGCAGG----------------------TACGGGAAATCTAGGTAGGCCTGGAAAGGGGGTGGCAGATGGTGTGGTGCTGAAGGAGAAGAGGTTGTACAGGCATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCCAGGGGAGGAGACTTCAGCAGCGGCCAGGGAACCGGGCAAGCTGGCTCCTCGGGCTCCCTGGGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCACCTGTTCCTCCCGCTCTGAGCCATCAGAGTC-TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCACCCAAATAAAATCTAGAGGTCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192391095 582 - 192460366 GCAAGCCTTTAGAATGCACAATCTAGGTAGGTAATCTAGGCAGGTATGGGAAATCTAGGCAGGTACGGGAAATCTAGGCAGG----------------------TACGGGAAATCTAGGTAGGCCTGGAAAGGGGGTGGCAGATGGTGTGGTGCTGAAGGAGAAGAGGTTGTACAGGCATAGGGGAGGGGACGGGGCT-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGGGCAAAAGACTGAAGATGGTCTGCCCAGGGGAGGAGACTTCAGCAGCGGCCAGGGAACCGGGCAAGCTGGCTCCTCGGGCTCCCTGGGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCACCTGTTCCTCCCGCTCTGAGCCATCAGAGTC-TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCACCCAAATAAAATCTAGAGGTCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGCAGAAGAGGAGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187311444 582 + 187378091 GCAAGCCTTTAGAATGTGCAATCTAGGTAGGTAATCTAGGCAGGTATGGGAAATCTAGGCAGGTATGGGAAATCTAGGCAGG----------------------TATGGGAAATCTAGGTAGGCCTGGAAAGGGGGTGGTGGATGGTGTGGTGCTGAAGGAGAAGAGGTTGTACAGGCAtaggggaggggatggggct-AAGCATCCCTGAGGCATTGATGGGGGAAACCCTGggcaaaagactgaaaatagTCTGCCCAGGGGAGGAGACTTCAGCAGCAGCCAGGGAACCGGGCAAGCTGGCTCCTCGGGCTCCCTGGGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGTGTGGGGATCTGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCATCTGTTCCTCCCGCTCTGAGCCATCAGAGTC-TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCACCCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTTTATAAACGTAGAAGAGGAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91336088 563 + 91754291 GCAAGCCTTTAGAATGCTCAATCTAGGTAGGTAATCTAGGCAGGTAT-------------------GGGAAATGTAGGCAGG----------------------TATGGGAAATCTAGGCAGGTCTGGAAAGGGGGTGGCAGAGGGTGTGGTGCTGAAGGAGAAGAGGTTGTACAGGCATAGGGGAGGGGACGGGGCT-GAGCATCCCTGAGGCATTGATGGGGGACACCCTGGGCAAAAGACTGAAGATGGTCTGCCCAGGGGAGGAGACTTCAGCAGCGGTCAGGGAACTGGGCAAGCTGCCTCCTCGGGCACCTTGGGGGTCTTCAGAGACACGAGGCCCAGGATCTCTGCATCTCACAAGTCAGGACGTTTGGAGGGGCTGGCGTGGGGATCCGGCAGCAAAGGTGCCTGATTTTCCCTTTGAGTCC--TCCCAGCCACCTGTTCCTCCCGCTCCGAGCCACCAGAGTC-TGATGAGGGAGATCACAGCAAGGCCTTTACCAAGCCCCCTTAGGCACCCAAATAAAATCTAGAGATCACTGTGCCTTCAGAGCCGAGGCCAGAGTGGGTAGAACCACAGATTCTATAAATGCAGAAGAGGAGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73813642 509 + 74750902 GCAAGCC-TTAGAATGCTC-------------AGTCTAGGTCAGTAT-------------------GGGAAATGTAGGTAGG-----------------------------------------CTTGAAAAGGGGGTGGTAGGTGGTGTGGGGCTGAAGGAAAAGAGGTTGTACAGGCACAGGGGAGGGGATAGCACT-CAGCATCCCTGAGACATTAATGGGGAAAACCCCAGGCAAAAGACCGAAGATGATCTGGTGAAAAGAGGAGACTTCAGTGG---CCCGCGAACCGGGAAAGCTGGGTCCTCGGGCTCTCTAGGCGTCTTCAGAGACACGGGGCCCAGG-TCTCTGCATCTCACAAATCAGGACATTTGTGGGTGCTGGCACAGGGATCCAGCAGTAAAGGTGCCTCATTTTCCCTTTGAGTCC--TCCCAGCCATCTGTCCCTCCCG-----------------C-TGATGAGGGAGGTCACAGGGAGGCCTTTACCAAGCCCCCTAAGGCACCCAAATAAAATCTAGAGATCACTGTGTCTTCAGAGCCAAGGCCAGAGTGGGTGGAACTGCAGCTTCTATAAAGGCAGAAAAGGAGAT i calJac3.chr17 C 0 C 0 s mm10.chr16 32775990 444 + 98207768 ATGTGTCTTTTAC---CTC-------------ATGATAAGAAGCTGT-----------------------AATGGGGGAGGA-----------------------------------------CTTAGAAA-GGGGTGGGAGGTAGTGTGGGGATGCAGGAGAGGA-----TGCAGAAGCCGAGGATGAGCCTGGACCAGAGCAGCCTCAAGACCCTGCTGGAGAAAACATAGGG--AAAGACTGATG------------GATAAGGCTAATTGATCAG-------------AGGCTAGCTAGGCTCTCAGG-TACCTGGGCATCTTCAGAAACACGGTGCTCAGGGGCTCTGCCTTTGACAAGTTGGAGAATCTGGAGGTGTTGCTATGGGGACCT--------CGGAACCTCAGTTTTCCTTTGGGTTCTTTCCTATGCGTCTGCTCCTCTTCCTCTGAGCCAGTGTTGTCACCATGACAGAGGTGACAGTGCAACCTTT--CCAATCCTCTAAGGCTGCCAAACACAACCAGGAGACTG--GCGCCTTC----------------TGGGTGGGACC----------------------AGGAGAC i mm10.chr16 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e canFam3.chr33 2308249 151 - 31377067 I a score=1330615.000000 s hg38.chr3_KI270937v1_alt 41188 500 + 165607 GGACGTGAGAGGGGAGGGCGTGAGGAAAGCCAGCTGGGGGCCCCTCCTCTGCCAGCCTTCGGGGTCCTTTCTGAAGCAGAGGGTCTGAGAAACACTCCAGTCCCTCCACAAAAGTGGAAGAATACCTGTCTGGCCGGGGAAAGGGGTTGCCCTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCCGAGTGGCCCGAAGTGGAACACTG-----------------GGG----GAAAGCAAGCC----TGTCCCGGAGCGGGTTTCCACGG---GCTGGGCCG-----------------TCCCTCTGCTG-CCCTGCGCGCTGCTGCTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCAGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCATGTGCACCTGCCCCCC-AGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCAACCTAGGTA s panTro4.chr3_GL389630_random 16622 499 - 103936 GGACGTGAGAGAGGAGGGCATGAGGAAAGCCAGCTGGGGGCCCCTCCTCTGCCAGCCTTCGGGGTCCTTTCTGAAGCAGAGGGTCTGAGAAACACTCCAGTCCCTCCACAGAAGTGGAAGAATACCTGTCTGGCCGGGGAAAGGGGTTGCCCTGCAGAGAAACTCCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCCGAGTGGCCCGAAGCGGAACACTG-----------------GGG----GAAAGCAAGCC----TGTCCCGGAGCGGGTTTCCACGG---GCTGGGCTG-----------------TCCCTCTGCTG-CCCAGCGCGCTGCTGCTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTG-GTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGTCAGCCCACGTGCACCTGCCCCCCGGGCCTTCACTGACAGCCGCTGCTTCCTGGCTGGGAACAACTTCAGTCC-ACTGTCAACCTAGGTA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819457 483 - 123690457 GGACGTGAGAGGGGAGGGCGTGAGGAAAGCCAGCTGGGGGCCCCTCCTCTGCCAGCCTTCGGGGTCCTTTCTGAAGCAGAGGGTCTGAGACACACTCCAGTCCCTCCACAGAAGTGGAAGAATACCTGCCTGGCCAGGGAAAGGGGTTGCCCTGCAGAGAAACGCCTGGAAAAG--CAGGGAAGGATGGTTTGGGGTTCCGAGTGG--------GGGAAA---------------------------GAAAGCAGGCC----TGTCCCGGAGCGGGTTTCCACGG---GCTGGGCTG-----------------TCCCTCTGCTC-CCCAGCGC---GCTGCTGACCTCCCTACTCACTCTGCAGCTCTGGGGAGCTCTTTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCATCTGTCCCCC-GGCCTTCACCGACAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCAACCTAGGTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 78233 505 - 111706 GGAAGTGAGAGGCGAGGGCGTGAGGAAAGCCGGCTGGGGGCCCCTCCTCTGCCAGCCTTCAGGGTCCTTTCTGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGGAAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCTGAGTGGCCCACAGCAGAACACTG-----------------GGGGAAAGAAAGCAGGCC----TGTCCCAGAGCGGGTTTCCACGG---GCTGGGCGC-----------------TCCCTCCGCTGCCCCAGTGCGCTGCTGCTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACTTGCCCCCC-GGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCCACCTAGGTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192391677 505 - 192460366 GGAAGTGAGAGGCGAGGGCGTGAGGAAAGCCGGCTGGGGGCCCCTCCTCTGCCAGCCTTCAGGGTCCTTTCTGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGGAAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCTGAGTGGCCCACAGCAGAACACTG-----------------GGGGAAAGAAAGCAGGCC----TGTCCCAGAGCGGGTTTCCACGG---GCTGGGCTC-----------------TCCCTCCGCTGCCCCAGTGCGCTGCTGCTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCC-GGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCCACCTAGGTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187312026 505 + 187378091 GGAAGTGAGAGGCGAGGGCGTGAGGAAAGCCGGCTGGGGGCCCCTCCTCTGCCAGCCTTCAGGGTCCTTTCTGAAGCAGAAGGCCTGAGAAACACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGTCGAGGAAAGGGGTTGCCTTGCAGAGAAACGCCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCTGAGTGGCCCACAGCAGAACGCTG-----------------GGGGAAAGAAAGCAAGCC----TGTCCCAGAGCGGGTTTCCACGG---GCTGGGCTC-----------------TCCCTCCGCTGCCCCAGTGCGCTGCTGCTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCGACGTGCACCTGCCCCCC-GGCCTTCACCGatagcctctgcttcctggctgGGAACAACTTCAGTCCAACTGTCCACCTAGGTa i papAnu2.chr2 C 0 I 315 s chlSab2.chr15 91336651 505 + 91754291 GGAAGTGAGAGGCGAGGGCGTGAGGAAAGCCGGCTGGGGGCCCCTCCTCTGCCAGCATTCAGGGTCCTTTCTGAAGCAGAAGGTGTGAGAAGCACTCCAGTCCCTCTCTAGAAGTGGAAGAATACCTGCCTGGCCGAGGAAAGGGGTTGCCCTGCAGAGAAACACCTGGAAAAG--GGGGGAAGGATGGTTTGGGGTTCTGAGTGGCCCACAGCAGAACACTG-----------------GGGGAAAGAAAGCAGGCC----TGTCCCGGAGCAGGTTTCCACGG---GCTGGGCTC-----------------TCCCTCCGCTGCCCCGGTGCGCTGCTGCTGACCTCCCTGCTCACTCTGCAGCTCTGGGGAGCTCTCTCCTGTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCGCTGCTACATCTCCCAGACTCTGGGCTGCCAGCCCACGTGCACCTGCCCCCC-GGCCTTCACCGATAGCCTCTGCTTCCTGGCTGGGAACAACTTCAGTCCAACTGTCCACCTAGGTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73814151 486 + 74750902 GGAAGTGAGAGGGGAGAGTATGAGGAAAGCTGGCTGGGGA-CCCTCATCTGCCAGCCTTCCGGGTCCTTTCTGAAGCAGAGGGTCTGAGAAACACTCCACTCCTGCTGCAGAAGTGGACGAATGCCTGCCTGGCTGAGGAAGGGGGTTTCCCTGC--AGAAATGCCTGGAAAAG--GGGAGAAG----------------GAGTGGCCCACAGCAGAACACTG-----------------CGGGAAAGAAACCAGGCC----TGTCCCAGAGCAGGTTTCCACCGGCTGCTGGGCTC-----------------TCCCTCTGCTG-CCTGCTGC--TGCTGCTGACCTCCCTGCTCCCTCTGCAGCTCTGGGCAGCTCTTCCCTCTGTCGGAACCAGTCCTGCCCTGTGAATTACTGCTACAATCAAGGCCACTGCTATATCTCTGAGGCTCTGGGCTGCCGGCCCTCGTGCACCTGCCCCCC-AGCCTTCACCGATAGCCGCTGCCTCCTGGCTGGAAACAACTTCACTCCGACTGTCCGCCTAGGTA i calJac3.chr17 C 0 C 0 s mm10.chr16 32776434 529 + 98207768 AGATGTGAGGGGAGAAGG---GGAGGAAGCAGACTGACAT-CTTTCTCCCACCAGCTTCTGGGTCCCTCTCTGGCGAGGATGCTCTGGTCAGCAAGCCATGCCCTGTGCAGAGGGGAAAAACCACTCACCTGGCAGA-CAGAACGGTTGCTTTACAGAGACATGCTTGGGGAAGATGTGGGGAAGGCAGTGTGGGGTTCAGAGTAGT---GAGCACAATACAGATTGGGCAAGCATTGTCGGGGAGGGAGAACCAAACAAGATATCCTAGA--AGATATCCTAGG---GTTAGGCTCCAACAGGCGGCTCATTGCCCATCAGCTGCCTCGTCGCGGCGTGGCTGATTCCCCTTCTCCCTTTACAGCTCTGGAGGACTCCT------GCCCAAACCGTTCCTGTCCCATGAATTACTGCTATAACAATGGCCATTGCGACATCTCTGAGGCTCCAGGCTGCCAGCCCACTTGCACCTGTCCCCC-TGCCTTCACTGATAACCGCTGCTTCCTGGCTGGGAACAGTTTCACTCCCACCATCTCTATGGGTA i mm10.chr16 C 0 C 0 s canFam3.chr33 2308400 440 - 31377067 GGGCGGGAGGAAGGAGGGGGCGAGACAAGCAGGCTGGGGCTCCCCACTCCG-CGGCCTTGGGGTCCCTTCCCGCTGCAGCAGGTCTGCTAAAT---------------------------------------GCAGAGGAAAGGCTTCG---GGCAGGGGA---CCAGGAGAAG--GGAGGGGGAGACTTCAGGGGTCGGGGACTGCT--AGGCAGGCCGAGA-----------------GGGCTTGGGGGGCCCGAG----CGTCCTGGGGGGG---CCCCTGG---GCTGGG--G-----------------ATCCTGGGCCT-CCCTGCCT-----------CCTGCCTCCTCCCTCCGCAGCTCTGGCCCCCGGGCTGCACTGTGGGAACCGGTCCTGCCCCGCCAGTTACTGCTACAACCGGGGCCACTGCCACGTGTCCCCCGAGAGGGACTGCCAGCCGGCCTGCACCTGCCACCC-CGCCTTCTCGGACAGCCGCTGCCTGGTGGCGGGGAACCCCTTCACTCCGGCCGCCCCTGCAGGTA i canFam3.chr33 I 151 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M a score=3104.000000 s hg38.chr3_KI270937v1_alt 41688 5 + 165607 C-CGCC s panTro4.chr3_GL389630_random 17121 6 - 103936 TGGGCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819940 5 - 123690457 C-TGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 78738 5 - 111706 C-CGCC i rheMac3.chrUn_JH291127 C 0 I 425 s macFas5.chr2 192392182 5 - 192460366 C-CGCC i macFas5.chr2 C 0 I 118 s chlSab2.chr15 91337156 5 + 91754291 C-CGCC i chlSab2.chr15 C 0 I 186 s calJac3.chr17 73814637 5 + 74750902 C-CACC i calJac3.chr17 C 0 C 0 s mm10.chr16 32776963 5 + 98207768 -TGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2308840 5 - 31377067 C-CACC i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e papAnu2.chr2 187312531 315 + 187378091 I a score=-2140.000000 s hg38.chr3_KI270937v1_alt 41693 2 + 165607 AG- s panTro4.chr3_GL389630_random 17127 2 - 103936 AG- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819945 2 - 123690457 AG- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73814642 2 + 74750902 AG- i calJac3.chr17 C 0 C 0 s mm10.chr16 32776968 1 + 98207768 A-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2308845 2 - 31377067 -GG i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e chlSab2.chr15 91337161 186 + 91754291 I e papAnu2.chr2 187312531 315 + 187378091 I e macFas5.chr2 192392187 118 - 192460366 I e rheMac3.chrUn_JH291127 78743 425 - 111706 I a score=-969.000000 s hg38.chr3_KI270937v1_alt 41695 3 + 165607 -AGA s panTro4.chr3_GL389630_random 17129 3 - 103936 -AGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819947 3 - 123690457 -AGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392305 3 - 192460366 -AGG i macFas5.chr2 I 118 C 0 s papAnu2.chr2 187312846 3 + 187378091 -agg i papAnu2.chr2 I 315 C 0 s calJac3.chr17 73814644 3 + 74750902 -ATG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2308847 3 - 31377067 CCG- i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32776969 0 + 98207768 C e chlSab2.chr15 91337161 186 + 91754291 I e rheMac3.chrUn_JH291127 78743 425 - 111706 I a score=14752.000000 s hg38.chr3_KI270937v1_alt 41698 7 + 165607 CCCCGCC s panTro4.chr3_GL389630_random 17132 7 - 103936 CCCCGCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2819950 7 - 123690457 CCCCGCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392308 7 - 192460366 CTCCGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187312849 7 + 187378091 ctccgcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91337347 7 + 91754291 CCCCGCC i chlSab2.chr15 I 186 C 0 s calJac3.chr17 73814647 7 + 74750902 CCCTGCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2308850 7 - 31377067 CCTGGCC i canFam3.chr33 C 0 I 113 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32776969 0 + 98207768 C e rheMac3.chrUn_JH291127 78743 425 - 111706 I a score=16665.000000 s hg38.chr3_KI270937v1_alt 41705 10 + 165607 -CTCTCACCCC s panTro4.chr3_GL389630_random 17139 10 - 103936 -CTCTCACCCC i panTro4.chr3_GL389630_random C 0 I 840 s nomLeu3.chr11 2819957 10 - 123690457 -CTCTCACCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392315 10 - 192460366 -CTCTTACCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187312856 10 + 187378091 -ctctcacccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91337354 10 + 91754291 -CTCTCACCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73814654 11 + 74750902 ACCCTCACCAT i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32776969 0 + 98207768 C e canFam3.chr33 2308857 113 - 31377067 I e rheMac3.chrUn_JH291127 78743 425 - 111706 I a score=4072.000000 s hg38.chr3_KI270937v1_alt 41715 31 + 165607 C--------------------------------GCACTCTTCCTGGGCCCCACCCTCTCACCC s nomLeu3.chr11 2819967 63 - 123690457 TGCACCCCGCCTGGGCCCCGCCCTCTCACCCCGGCACTCCTCCCGGGCCCCACCCTCTTGCCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392325 31 - 192460366 --------------------------------TGCGCCCCACCCGGGCCCCGCCCTCTCACCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187312866 31 + 187378091 --------------------------------tgtgccccacccgggccccgccctctcacct i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91337364 31 + 91754291 --------------------------------CACACTCCACCCAGGCCCCGCCCTCTCACCC i chlSab2.chr15 C 0 I 294 s calJac3.chr17 73814665 9 + 74750902 --------------------------------TGCACTCTT---------------------- i calJac3.chr17 C 0 C 0 s mm10.chr16 32776969 16 + 98207768 -----------------------------------ACTGCTCCTG---CCAGCC--------- i mm10.chr16 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e canFam3.chr33 2308857 113 - 31377067 I e rheMac3.chrUn_JH291127 78743 425 - 111706 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=28276.000000 s hg38.chr3_KI270937v1_alt 41746 25 + 165607 CCGCACTCCGCCCACCTTTGGGGAA s nomLeu3.chr11 2820030 25 - 123690457 CCGCACTCCGCCCACCTTTGGAGAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392356 25 - 192460366 CCACACTCCTCCCACCTTTGGGGAA i macFas5.chr2 C 0 I 16 s papAnu2.chr2 187312897 25 + 187378091 ccacactcctcccacctTTGGGGAA i papAnu2.chr2 C 0 I 16 s chlSab2.chr15 91337689 25 + 91754291 CCACGCTCCTCCCACCTTTGGGGAA i chlSab2.chr15 I 294 I 16 s calJac3.chr17 73814674 15 + 74750902 ----------CCCACCTTTGGGGAT i calJac3.chr17 C 0 C 0 s mm10.chr16 32776985 25 + 98207768 CCAGTCGTCTCTCGTATATGGGGAT i mm10.chr16 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e canFam3.chr33 2308857 113 - 31377067 I e rheMac3.chrUn_JH291127 78743 425 - 111706 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=338297.000000 s hg38.chr3_KI270937v1_alt 41771 206 + 165607 GATGAGGAAGC-----TCTGGGGTCACAG---------GACAGAGCTCCAGATTTCTCTGGGATGGTGTAAGGTGCGGGCTATGGGAGCTGGCGAGGCAAGCTGTCACGGCAAGGACCACGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAGCGCTGGGGAGGCCCGGAGCATAGTGGAGTGAGCCC s nomLeu3.chr11 2820055 206 - 123690457 GATGAGGAAGC-----TCTGGGGTCACAG---------GACAGAGCTCCAGATTTCTCTGGGACGGTGTAAGGTGCAGGCTATGGGAGCTGGCGAGGAAAGCTGTCATGGCAAGGACCATGGGCCTGTGTGGCCTATGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAGCGTCGGGGAGGTCCGGAGCATAGTGGAGTGAGCGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79168 203 - 111706 GATGGGGAAGC-----TCTGGGGTCACAG---------GAC--AGCTCCGGATTTCTCTGGGATGGTGTAAGGTGCGGGCTGTAGGAGCTGGCGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGAGCGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i rheMac3.chrUn_JH291127 I 425 C 0 s macFas5.chr2 192392397 203 - 192460366 GATGGGGAAGC-----TCTGGGGTCACAG---------GAC--AGCTCCGGATTTCTCTGGGATGGTGTAAGGTGCGGGCTGTAGGAGCTGGCGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACTTCACAGCTGGCTCAGTGAGATGAGCGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i macFas5.chr2 I 16 C 0 s papAnu2.chr2 187312938 205 + 187378091 GATGGGGAAGC-----TCTGGGGTCACAG---------GACAGAGCTCCAGATTTCTCTGGGATGGTGTAAGGTGCGGGCTGTAGGAGCTGGGGAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGGAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCCGTGAGATGAGCGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i papAnu2.chr2 I 16 C 0 s chlSab2.chr15 91337730 203 + 91754291 GATGGGGAAAC-----TCTGGGGTCACAG---------GAC--AGCTCCGGATTTCTCTGGGATGGTGTAAGGTGCGGGCTGTAGGAGCTGGCCAGGGCAGCTGTCACAGCAAGGACCACGGGGCTGTGTGGCCTGTGGAGAAAGGACGGAGGCAGA------------------------------------------------------------------------GACCTCACAGCTGGCTCAGTGAGATGAGCGGC-CGGAGGCCCGGGGCATAGTGGAGTGAGCGC i chlSab2.chr15 I 16 C 0 s calJac3.chr17 73814689 204 + 74750902 GATGGGGAAGC-----TCTGGGA-CACAG---------CACAGAGCTCCAGGTTTCTCTGGGATGGGGTAAGGTGTGGGCTGCGGGAGCTGGCGAGGGCAGCTGTCACGGCAAGGACCGTGGGCCTGTG-GACCTTCTGAGGAAGGGTGGAGGCAGA------------------------------------------------------------------------GACCTCATGGCTGGCTCAGGGAGAAGACAGTCAGGGAGGCCCTAACCACAACTGAATGAGCAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32777010 281 + 98207768 GATGGGAAAACCAGTGTCTGAGGTCCAAGTTCCTCAAAGGCACAGATCAGAA-----CTGAGGTGGTG--AGTTTGGGGCTGGAGGACATGATGAGGAGAGCTCTCCCAGTGTGAACCACCGGCCTTGGTCATCTGCAGAGGACAGACGGAGGCAGAAGAAGCCTCGGCAGtgtagagagaatctcttgtgcatcgtgtggaagcatcaagtgtcaataagacgctgttggcctcctagcttaggcaggaaatagggaggt-agaagttcc--agcacagagaggggattt- i mm10.chr16 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e canFam3.chr33 2308857 113 - 31377067 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=23626.000000 s hg38.chr3_KI270937v1_alt 41977 33 + 165607 TAGCGTGAGGGCCACTTCTCCCGGTTTCTTCAG s nomLeu3.chr11 2820261 33 - 123690457 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392600 32 - 192460366 TAGGGTGAGGGCCACTTCT-CCGGTGTCTTCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187313143 32 + 187378091 TAGGGTGAGGGCCACTTCT-CCGGTGTCTTCAG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73814893 33 + 74750902 TAGGGTGAGGGTCACTTGTACTGATTTCTTCAG i calJac3.chr17 C 0 C 0 s mm10.chr16 32777291 32 + 98207768 cagtg-gagagagatttgcttcaaactcttaag i mm10.chr16 C 0 I 221 e ponAbe2.chr3 2357971 1691 - 202140232 M e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=11029.000000 s hg38.chr3_KI270937v1_alt 42010 18 + 165607 CAACCTTCTGTCACTGTG s nomLeu3.chr11 2820294 18 - 123690457 CGACCTTCTGTCACTGTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192392632 15 - 192460366 TGAC---CTGTCACTGTG i macFas5.chr2 C 0 T 47 s papAnu2.chr2 187313175 15 + 187378091 TGAC---CTGTCACTGTG i papAnu2.chr2 C 0 T 47 s calJac3.chr17 73814926 18 + 74750902 TGACCTTCTGTCACTGTG i calJac3.chr17 C 0 T 51 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=473.000000 s hg38.chr3_KI270937v1_alt 42028 5 + 165607 GAATG s nomLeu3.chr11 2820312 5 - 123690457 GAATG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e calJac3.chr17 73814944 51 + 74750902 T e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e papAnu2.chr2 187313190 47 + 187378091 T e macFas5.chr2 192392647 47 - 192460366 T e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=6130.000000 s hg38.chr3_KI270937v1_alt 42033 27 + 165607 TAGGGTGAGGGCCACTTCTCCCGGTTT s nomLeu3.chr11 2820317 27 - 123690457 TAGGGTGAGGGCCACTTCTCCTGGTTT i nomLeu3.chr11 C 0 I 9685 s calJac3.chr17 73814893 27 + 74750902 TAGGGTGAGGGTCACTTGTACTGATTT i calJac3.chr17 T 51 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e papAnu2.chr2 187313190 47 + 187378091 T e macFas5.chr2 192392647 47 - 192460366 T e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=7067.000000 s hg38.chr3_KI270937v1_alt 42060 29 + 165607 GCTCAGCGACCTTCTGTCACTGTGGAATG s nomLeu3.chr11 2830029 29 - 123690457 GGTCAGCGACCTTCTGTCACTGTGGAATG i nomLeu3.chr11 I 9685 C 0 s calJac3.chr17 73814920 29 + 74750902 CTTCAGTGACCTTCTGTCACTGTGGAATG i calJac3.chr17 C 0 T 56 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e papAnu2.chr2 187313190 47 + 187378091 T e macFas5.chr2 192392647 47 - 192460366 T e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=14190.000000 s hg38.chr3_KI270937v1_alt 42089 56 + 165607 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGCGACCTTCTGTCACTGTGGAATG s nomLeu3.chr11 2830058 56 - 123690457 TAGGGTGAGGGCCACTTCTCCCGGTTTCTTCAGTGACCTTCTGTCACTGTGGAATG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73814893 56 + 74750902 TAGGGTGAGGGTCACTTGTACTGATTTCTTCAGTGACCTTCTGTCACTGTGGAATG i calJac3.chr17 T 56 C 0 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e chlSab2.chr15 91337933 0 + 91754291 C e papAnu2.chr2 187313190 47 + 187378091 T e macFas5.chr2 192392647 47 - 192460366 T e rheMac3.chrUn_JH291127 79371 0 - 111706 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=4692.000000 s hg38.chr3_KI270937v1_alt 42145 3 + 165607 TAG s nomLeu3.chr11 2830114 3 - 123690457 TAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79371 3 - 111706 TAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192392600 3 - 192460366 TAG i macFas5.chr2 T 47 C 0 s papAnu2.chr2 187313143 3 + 187378091 TAG i papAnu2.chr2 T 47 C 0 s chlSab2.chr15 91337933 3 + 91754291 TAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73814949 3 + 74750902 GAG i calJac3.chr17 C 0 T 56 e ponAbe2.chr3 2357971 1691 - 202140232 M e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=47658.000000 s hg38.chr3_KI270937v1_alt 42148 24 + 165607 GGTGAGGGCCACTTCTCCCGGTTT s ponAbe2.chr3 2359672 24 - 202140232 GGTGAGGGCCACTTCTCCCGGTTT i ponAbe2.chr3 M 1691 C 0 s nomLeu3.chr11 2830117 24 - 123690457 GGTGAGGGCCACTTCTCCCGGTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79374 23 - 111706 GGTGAGGGCCACTTCT-CCGGTGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192392603 23 - 192460366 GGTGAGGGCCACTTCT-CCGGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187313146 23 + 187378091 GGTGAGGGCCACTTCT-CCGGTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91337936 23 + 91754291 GGTGAGGGCCACTTCT-CCGGTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73814896 24 + 74750902 GGTGAGGGTCACTTGTACTGATTT i calJac3.chr17 T 56 C 0 e mm10.chr16 32777323 221 + 98207768 I e canFam3.chr33 2308857 113 - 31377067 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=42768.000000 s hg38.chr3_KI270937v1_alt 42172 22 + 165607 CTTCAGTGACCTTC-TGTCACTG s ponAbe2.chr3 2359696 23 - 202140232 CTTCAGTGACCTTCGTAAAAGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830141 22 - 123690457 CTTCAGTGACCTTC-TGTCACTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79397 19 - 111706 CTTCAGTGACC----TGTCACTG i rheMac3.chrUn_JH291127 C 0 I 2 s macFas5.chr2 192392626 19 - 192460366 CTTCAGTGACC----TGTCACTG i macFas5.chr2 C 0 I 2 s papAnu2.chr2 187313169 19 + 187378091 CTTCAGTGACC----TGTCACTG i papAnu2.chr2 C 0 I 2 s chlSab2.chr15 91337959 19 + 91754291 CTTCAGTGACC----TGTCACTG i chlSab2.chr15 C 0 I 2 s calJac3.chr17 73814920 22 + 74750902 CTTCAGTGACCTTC-TGTCACTG i calJac3.chr17 C 0 I 2 s mm10.chr16 32777544 20 + 98207768 TTTCAGTGACCT---TGCCATGG i mm10.chr16 I 221 I 1 e canFam3.chr33 2308857 113 - 31377067 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=43304.000000 s hg38.chr3_KI270937v1_alt 42194 19 + 165607 GAATGGAGCAGTCAACTTG s ponAbe2.chr3 2359719 18 - 202140232 GAATGGAGCA-TCGGCCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830163 19 - 123690457 GAATGGAGCAGTCGGCCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79418 19 - 111706 GAATGGAGCCGTTGCCCTG i rheMac3.chrUn_JH291127 I 2 C 0 s macFas5.chr2 192392647 19 - 192460366 GAATGGAGCCGTTGCCCTG i macFas5.chr2 I 2 C 0 s papAnu2.chr2 187313190 19 + 187378091 GAATGGAGCCGTCGCCCTG i papAnu2.chr2 I 2 C 0 s chlSab2.chr15 91337980 19 + 91754291 GAATGGAGCCGTCGCCCTG i chlSab2.chr15 I 2 C 0 s calJac3.chr17 73814944 19 + 74750902 GAATGGAGTAGTCTCCCTG i calJac3.chr17 I 2 C 0 s mm10.chr16 32777565 19 + 98207768 GGATGGAGCTGTCTCTCTG i mm10.chr16 I 1 C 0 e canFam3.chr33 2308857 113 - 31377067 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=586763.000000 s hg38.chr3_KI270937v1_alt 42213 204 + 165607 GGCTG-GCCCGACAGACTTTTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAAGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCTGGGTGGGAGGGGGCGCTTGGCGGGTTCAGGC s ponAbe2.chr3 2359737 203 - 202140232 GGCTG-GCCCGACAGACTTTT-GGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCCTGCTCAGTGGAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGAGCTCTGGGTGGGAGGGGGCGCTTGGCGGGTTCAGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830182 204 - 123690457 GGCTG-GCCCGACAGACTTTTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGACACATTTGCTTCTCCCATCTCCAGAACTTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGCTCAACGCCTTGGTCAGTGCTGCAGGCCATGCTCTGGGTGGGAGGGGATGCTTGGCGGGTTCAGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79437 204 - 111706 GGCTG-GCCCGACGGACTTCTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGACGCTTGGCGGGTTCAGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192392666 204 - 192460366 GGCTG-GCCCGACGGACTTCTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTTTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCACGCTCCGGGTGGGAGGGGACGCTTGGCGGGTTCAGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187313209 204 + 187378091 GGCTG-GCCCGACGGACTTCTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCGGGCCGCGCTCCGGGTGGGAGGGGACGCTTGGCGGGTTCAGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91337999 204 + 91754291 GGCTG-GCCCCACGGACTTCTTGGGTAAG-----------------------------------------TCTGGGTAAACCGTGGGGTGATGATACATTTGCTTCTCCCATCTCTAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGTGAAGAGGAAAATGCCTCCATGGCAGAGGTCAACGCCTCGGTCAGTGCTGCAGGCCGCGCTCCGGGTGGGAGGGGACGCTTGGCGGGTTCAGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73814963 243 + 74750902 GGCCG-ACCCAACAAACTTCTTGGGTAAGTATGGGTAAACCATGGGGTGCTGATGAATTTCCTTCTCCCATCTGTGTAAACCATGGGGTGATGATGAATTTCCTTCTCCCATCTCCAGAACCTCCCTTAAGAGTCATCCAGCTCTTGCTCAGCGAAGAGGAAAATGCCTCCATGGCAGACATCAACGCCTCGGTCAGTGCTGCAGGCTGCACTCTGGGCGGGAAGGAGAGCTTG--GGGTTCAGGC i calJac3.chr17 C 0 I 3982 s mm10.chr16 32777584 191 + 98207768 AGCCGCACAGGATAGAAG--TTGGATAAG-----------------------------------------TCTGGGAACCCTCTGGGTCTGAGATGGGTCTTCTTT----ATCTCCAGAGCTTCCCTTAAGGACCATCGTGCTCTCTCTCAGGGAGGATGAAAATGCCTCCGCCGCTGACGTCAACGCCTCGGTCAGTGCTG-------GGCTCCCAGTGGGAAGTGGATCTTGAAAGGGTCTCC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2308970 181 - 31377067 GACAG-GCCCAGCCACCTCCCCGGG---G-----------------------------------------CCGGGGGTGACCGTGG------------CCTGCGTCTCCCGTTTCCAGGGCTTCCGGTGAGGCTCATCCAGCTCTGGCTCAGTGAAGAAGAAAATGCCTCCGTGGCCGATGTCAACGCCTCGGTCGGTGCTGCAGGCCAG---CAGGGTGGGGAGGCG-GCCTGGCAGG---GGG- i canFam3.chr33 I 113 C 0 e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=980597.000000 s hg38.chr3_KI270937v1_alt 42417 488 + 165607 CAGGGCGGAACCATCGCTGTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCCAAGA--------------------CAGAAACCTC-----GACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCCCAGCCGAGACCTCTAAGCATCTT------------------GGTTATGATCTGAAAG--AAACTaaagga---catttcacctcccgggagtcttccctgacttcccagagggaacgggcggctccctcttcttggctgccATG---------CCATACCTCAGTCACAGGCAAAGTGGCACAACTGCTGAGTGGTTGgggctgtagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagcaggtgtgctaactagacacatcatata-acaggtcatctgtaaacacagggacaat----catagcacctgagtcaacaggccgtatcaccgtttaa s ponAbe2.chr3 2359940 487 - 202140232 GAGGGCGGAACCATCACTGTG--CGGTCTTCGTCT-TGTCATCCATCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCCGGGA--------------------CAGAAACCTC-----AACTCATCATAAGCAGAGGCCAGGGT-GCCAAGTCACCCCAGCCGAGACCTCTAAGCATCTT------------------GGTTATGATCTGAAAG---agctaaagga---catttcacctccagggagtcttccctgacttcccagagggaaggggcggctccctcttcttggctgccATG---------CCATACCTCAGTCACAGGCAAAGTGGCACAACTGCCGAGTGGTTGgggctctagaaccctgcacacccagaatcagaatccctgctctgcccc----------------------tcactggagcaggtgtgctaactagacacatcatata-acaggtcatctgtaaacacggggacaat----catagcacctgagtcaacaggccgtatcaccgtttaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830386 487 - 123690457 GAGGGCAGGACCATCACTGTG--TGGCCTTCGTCT-TGTCATCTCTCTGGATTCAACTGCCAGAGGAGG-CCGGAGCCTCTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCCAGGA--------------------CAGAAACCTC-----GACTCATCATAAGCAGAGGCCAGGAT-GCCAAGTCACCCCAGCTGAGACCTCTAAGCTTCCT------------------GGTTATGATCTGAAAG--AAACTaaagga---catttcacctccagggagtcttccctgacttccaagagggaactggcagctccctcttcttggctgccATG---------CCATACCTCAGTCACaggcaaagtggcgcaactgccgagtggttggggctctagaatcctgcacacccagaatcagaatccctgctctgcccc----------------------tcactagagca-gtgtgctaactagacacatcatata-acaggtcatctgtaaacacagggacaat----catagcacctgagtcaacaggctgtatcaccatttaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 79641 488 - 111706 GAGGGCGGAACCATCCCTGTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGAAGG-CCGGAGCCTGTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCGGGGA--------------------CAGAAACCTC-----AGCTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCCCAGCCGAGACCTCTAAGCATCTC------------------GGGTATGACCTGGAAG--AAACCAAAGGA---CGTTTCAcctccagggagacttccctgacttcccagagggaactgggtgctccctgctcttggcttccatg---------ccataccccaatcacagGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcctgcacacccagaatcaaaacctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatgta-acaggtcatctgtaaacacagggacaag----catagcacctgagtcaacaggctgtctcaccgtttaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192392870 488 - 192460366 GAGGGCGGAACCATCCCTGTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGAAGG-CCGGAGCCTGTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCGGGGA--------------------CAGAAACCTC-----AGCTCACCACAAGCAGAGGCCAGGGT-GCCAAGTCACCCCAGCCGAGACCTCTAAGCATCTC------------------GGGTATGACCTGGAAG--AAACCAAAGGA---CGTTTCAcctccagggagtcttccctgacttcccagagggaactgggtgctccctgctcttggcttccatG---------CCATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagcatcctgcatacccagaatcaaaacctctgcgctgcccc----------------------tcactagagcaggtatgttaattacacacattatgta-acaggtcatctgtaaacacagggacaag----catagcacctgagtcaacaggctgtctcaccgtttaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187313413 488 + 187378091 GAGGGCGGAACCATCCCTGTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCCAGAGGAGG-CCGGAGCCTCTTGCCCC----ACGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCCGGGGA--------------------CAGAaacctc-----agctcaccacaagcaGAGGCCAGGGT-GCCAAGTCACCCCAGCCGCGACCTCTAAGCATCTC------------------GGGTATGACCTGGAAG--AAACCAAAGGA---CGTTTCACCTCCAGGGAGTCTTCCCTGACTTCCCAGAGGGAACTGGGTGCTCCCTGCTCTTGGCTTCCATG---------CCATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAGGCTCTAGCATCCTGCACACCCAGAATCAAAATCTCTGCGCTGCCCC----------------------TCACTAGAGCAGGTATGTTAATTACACACATTATGTA-ACAGGTCATCTGTAAACACAGGGACAAG----CATAGCACCTGAGTCAACAGGCTGTCTCACCGTTTAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91338203 483 + 91754291 GAGGGCGGAACCATCCCTGTG--CGGCCTTCATCT-TGTCATCCATCTGGATTCAATTGCC--AGGAGG-CCGGAGCCTCTTGCCCC----ATGGGAGGTGCAGGGCATTAGGAAGTGAGGAAGGCGGGGGA--------------------CAGAAACCTC-----AACTCACCATAAGCAGAGGCCAGGGT-GCCAAGTCACCCCATCCGAGACCTCTAAGCATCTC------------------GGGTATGATCTGGAAG--AAACGAAAGGA---CGTTTCAcctccaggcagtcttccctgacttcccagagggaactgggtgctccctgttcttggcttccatG---------CCATACCCCAATCACAGGCAAAGTTGCACAACTGCCGAGTGTTTGAggctctagaatcctgcacacccagaatcaaaatctctgcgctgctcc----------------------tcactagagcaggcatgttaattacacac---atgta-acaggtcatctgtaaacacagggacaag----cacagcacctgagtcaacaggctgtctcaccgtttaa i chlSab2.chr15 C 0 C 0 s mm10.chr16 32777775 492 + 98207768 -----CAGGGACCTTGCAGT----AGCTTACA----CATCCTTCAGCTACCTTAATTTCCCAAAGAGGG---GGAGCCTCTTG-CCC----AGGGGTCGTTCAAGGGCCTAGGATGCCAGGAAGCTTCAGGATTAGAGACCACAGAATGTGTTAGAATCACC-----AGCTTGCCCTGAGAAGAATCTCGGGT-GGCACGTCACTCCAGTCTGTCCCTCTGGGTACTCCTCATGATTCGCACTCTCTGGCTGCTATATGGcag--aag---------------tcacctcc---------tccctgattccccaaagggcacagggacccctct-------gataccatga--cctcgtctatatccccat--taagcaAAGTAGCCAGATTGGTGAATGGCAGGACCTCTAGACTCCTATACA-CAGGAACCTGAAACTCTACCCTGCCTC----------------------TCTCTAGAGCAGGAGCAATAATTAAACAAGTTATTTATATCAActttgtatataaaagtggacgatagtaagtagtacc--ggtcagtaggttgtattaagatttaa i mm10.chr16 C 0 C 0 s canFam3.chr33 2309151 548 - 31377067 CAAGCAGGGGCCAGCCCTGCTCCCGGGCTCCACATCTGCCACCCATCGAGACTTGACTGCCAGAGGAGGCCCAGAGCCTCCTGCCCCCAGGAGGGCCGGCGGAAGG-ATGGGGAAGGCAGGAAG-CCCAGGA--------------------CAGTGACCCCCCAGGGGACTGGAATAACTCGGGTGTAGGGTGGCCGAGTCACCCCAGCCTC-CCTCCTGAGTGTCCCTAGAGACTTGCACTT---GGGTGTCATATGGTATTTCAACCCCAGGAAGGTATTTCAcctccaggaagccctcctcgacttcccagagggaaccagcagctccttcctcttggcc-ccgtaggcccctgtccatCCCTCAACCACACGCCAAgtagcacaatagctgaagcgctgaggctccagagtcatacatacccgggttctaatcctctagaacattccctagaacaggtgcaataatcattccctagaacaggtgcaataattagacaaactatttg-atgtctcatctgtaaa-gtagaaatacc----cataatacctgtgtcaacgggttgtgtcaaggtttaa i canFam3.chr33 C 0 C 0 e calJac3.chr17 73815206 3982 + 74750902 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=163015.000000 s hg38.chr3_KI270937v1_alt 42905 88 + 165607 atgataacgcgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgatgact---gctattatCACTACTGCAAGCCTAG s ponAbe2.chr3 2360427 84 - 202140232 atgagaacgtgtgtcaagcatttagtccagtgcctgacacacag-----gtattcaaacatgatga------ttatt-TTACTACTGCAAGCCTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830873 85 - 123690457 atgataacgtgtgtcaagcatttagtccagtgcctgacacacaa-----gtattcaaacatgattg------ctattattACTACTGCAAGCCTAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80129 85 - 111706 atgat---gtgcgtcaagcatttagtacggtgcccgacacgcaa-----gtattcaaacattgtaatt---gctattattACTACTGCACACATAG i rheMac3.chrUn_JH291127 C 0 I 317 s macFas5.chr2 192393358 85 - 192460366 atgat---gtgcgtcaagcatttagtacggtgcccgacacacaa-----gtattcaaacattgtaatt---gctattattACTACTGCACACATAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187313901 85 + 187378091 ATGAT---GTGCGTCAAGCATTTAGTACGGTGCCCGACACGCAA-----GTATTCAAACATTGTAATT---GCTATTATTACTACTGCACACATAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91338686 85 + 91754291 atgat---gtgcgtcaagcatttagtacggtgcccgacacgcaa-----gtattcaaacattctaatt---gctattattACTACTGCAAGCATAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73819188 81 + 74750902 ATAACAATGCATGTAAAGC----AGTATGGTGGCCGACACACAG-----GTATTCGAAAACTATTT------TTGTTATTACTGCTGTTAGCGTGG i calJac3.chr17 I 3982 C 0 s mm10.chr16 32778267 86 + 98207768 atgataa-tagtgtaaagcacttagta------ctgaaacacaacaggcataattcaaagtgattatt---actATTAATACCCTGACTGCCAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2309699 91 - 31377067 atgataatgtatgtaaagcgcttaccatggtgcctaaaatacaa-----gtgctcaaaaattataATGATAATAATTATTCCTACTGCTGGTACAA i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=10384.000000 s hg38.chr3_KI270937v1_alt 42993 5 + 165607 ---CACTC s ponAbe2.chr3 2360511 5 - 202140232 ---cactc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2830958 5 - 123690457 ---CACTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80531 5 - 111706 ---cactc i rheMac3.chrUn_JH291127 I 317 C 0 s macFas5.chr2 192393443 5 - 192460366 ---cactc i macFas5.chr2 C 0 I 358 s papAnu2.chr2 187313986 5 + 187378091 ---cactc i papAnu2.chr2 C 0 I 438 s chlSab2.chr15 91338771 5 + 91754291 ---CACTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73819269 5 + 74750902 ---CACTC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2309790 5 - 31377067 CAGCA--- i canFam3.chr33 C 0 C 0 e mm10.chr16 32778353 0 + 98207768 C e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=19587.000000 s hg38.chr3_KI270937v1_alt 42998 15 + 165607 CCCACTCCACACTCC s ponAbe2.chr3 2360516 15 - 202140232 cccactcctcactcc i ponAbe2.chr3 C 0 M 20226 s nomLeu3.chr11 2830963 15 - 123690457 CACATTCCACACTCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80536 15 - 111706 cccactccccactcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192393806 15 - 192460366 cccactccccactcc i macFas5.chr2 I 358 C 0 s papAnu2.chr2 187314429 15 + 187378091 cccactccccactcc i papAnu2.chr2 I 438 C 0 s chlSab2.chr15 91338776 15 + 91754291 CCCACTCCACACTCC i chlSab2.chr15 C 0 I 884 s calJac3.chr17 73819274 3 + 74750902 --CAT---------- i calJac3.chr17 C 0 C 0 s mm10.chr16 32778353 12 + 98207768 ---ACATTAAATCCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2309795 10 - 31377067 -----TCTAGACCCT i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=43949.000000 s hg38.chr3_KI270937v1_alt 43013 28 + 165607 ACACGGTAAAATCTGTTGACATTTGTCA s nomLeu3.chr11 2830978 28 - 123690457 ACACGGTAAAATCTGTTGACATTTGTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80551 28 - 111706 acGTGGTAAAATCTGTTGACATTTGTCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192393821 28 - 192460366 ACGTGGTAAAATCTGTTGACATTTGTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187314444 28 + 187378091 acaTGGTAAAATCTGTTGACATTTGTCA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73819277 23 + 74750902 -----GTAAAATCTGTTGCCATTTGTCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32778365 28 + 98207768 AACGAATCAGGTCTGATGACATTCATCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2309805 28 - 31377067 GTAAGGGGAAGTCCGTTGACACCTGTCT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2360531 20226 - 202140232 M e chlSab2.chr15 91338791 884 + 91754291 I e panTro4.chr3_GL389630_random 17149 840 - 103936 I a score=92465.000000 s hg38.chr3_KI270937v1_alt 43041 54 + 165607 CCTGCGCCAGACAATGCACTCTTTGAGTTTAGACTCCACCTAAGTCACCTTGAC s panTro4.chr3_GL389630_random 17989 54 - 103936 CCTGCGCCAGATGGTGCACTCTTTGAGTTTAGACTCCACCTAACTCACCTTGAC i panTro4.chr3_GL389630_random I 840 C 0 s nomLeu3.chr11 2831006 54 - 123690457 CCTGCGCCAGACAATGCACTCTTTGAGTTTACACTCCACCTAAGTCACCTTGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80579 54 - 111706 CCTGCACCAGACTATGCACTCTTTGAGTTTAGACTCCACCTAAGTCACCTTGAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192393849 54 - 192460366 CCTGCACCAGACTATGCACTCTTTGAGTTTAGACTCCACCTAAGTCACCTTGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187314472 54 + 187378091 CCTGCACCAGACTATGCACTCTTTGAGTTTAGACTCCACCTAAGTCACCTTGac i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73819300 52 + 74750902 CCTGCACCAGACTATGCACTC--TGAATTTAGACTCCTCCTAAGTCACCTTGAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32778393 40 + 98207768 GCTGCCCTTGACCAAAGGCTCTTTGGATATAA--------CAGGTGAC------ i mm10.chr16 C 0 C 0 s canFam3.chr33 2309833 38 - 31377067 ACTTCACCA-ACTAGGGGTCTTT---------------CCTGAGTCAGCTTGAC i canFam3.chr33 C 0 C 0 e ponAbe2.chr3 2360531 20226 - 202140232 M e chlSab2.chr15 91338791 884 + 91754291 I a score=187309.000000 s hg38.chr3_KI270937v1_alt 43095 125 + 165607 ACCCCCAGCCCC-GACCATCTCCTA----GGT----CT------AAACAACC-CATGTTCAATATACTGGGGAG-------GAGGTCATGAGTC----ATGTGTCAGAGGC-AAGGTAGGGGCCATTCATGTCAGATTCTCTGCTCGTCATAT s panTro4.chr3_GL389630_random 18043 126 - 103936 ACCCCCAGCCCCTGACCATCTCCTA----GGG----CT------AAACAACC-CATGTTCAATATACTGGGGAG-------GAGGTCATGAGTC----ATGTGTCAGAGGC-AAGGTAGGGGCCATTCATGTCAGATTCTCTGCTCGTCATAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 171701 127 - 20583478 ACCCCCAGCCCCTGACCATCTCCTA----GGT----CT------AAACAACCTCAAGGTCAATATACTGGGGAG-------GAGGTCATGAGTC----ACGCGTCAGAGGC-AAGGCAGGGGCCATTCATGTCAGTGTCTCGGCTCGTCATAT i ponAbe2.chr3_random n 0 C 0 s nomLeu3.chr11 2831060 125 - 123690457 ACCCCCAGCCCCTGACCATCTCCTA----GGT----CT------AAACAACC-CATGTTCAATATAC-GGGGAG-------GAGGTCATGAGTC----ATGCATCAGAGGC-AAGGTAGGGGCCATTCATGTCAGATTCCCCGCTCGTCATAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80633 84 - 111706 ACCCACAGCCCCTGACCACCTCCTA----GGT----CT------ACTTAACC-CATGTTCAGTATACTGTGGAG-------G-GGTCATGAGTC----ATGCATCAGAGGC------------------------------------------ i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192393903 84 - 192460366 ACCCACAGCCCCTGACCATCTCCTA----GGT----CT------ACTTAACC-CATGTTCAGTATACTGTGGAG-------G-GGTCATGAGTC----ATGCATCAGAGGC------------------------------------------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187314526 84 + 187378091 acccccagcccctgaccaCCTCCTA----GGT----CT------ACTTAACC-CATGTTCAGTATACTGTGGAG-------G-GGTCATGAGTC----ATGCATCAGAGgc------------------------------------------ i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73819352 129 + 74750902 ACCTGCAGCACCTGACCAGCTCCTACTTCTGC----CT------AAACAATC-GATGTCCAATATACTGGGGCA-------GGGGCCAAGAGTC----GTGGACCAGAGGC-AAGG-AGGGGCCATGCACATCAGATTCTCCGCTTGTCATAT i calJac3.chr17 C 0 C 0 s mm10.chr16 32778433 121 + 98207768 ATTCCTGGCACCTGGACATCTCTAG----GGCTTAGCT------GAAGAGTT-TGTGTTTGGTACA-TATGAGG-------GTGGACTGGGATCAGAGATGGAGCAGAGAT-------------GTTCGTCTCACATGTTCCCCTGGCAACAT i mm10.chr16 C 0 I 1 s canFam3.chr33 2309871 138 - 31377067 --CCCCAGCACCCGACCATCCCCTA----GGT----CTAGCTGGACATAATC-AATGTTTAAAAACATGTGGGGCGAGAACGAGAGCGTGAGTC----AGGGGGCGGAGGCAAAGGTAGGGGCCACTCATTTCAGATTCCCCCCTTGTCATGG i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91338791 884 + 91754291 I a score=564581.000000 s hg38.chr3_KI270937v1_alt 43220 218 + 165607 GAGGCTGAGG-GGGGGACAGAATGGAAAACCCttcactct-caacaaacatt-attaagcaaggacccatgacactcactgagctaggctagagtgcaagggtgcagagacaggtgaggaaggtgctg-gggt-----------------------------------------------------------------cctggggctcccg-ttccaggaggaaacag----ggatgaataCACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGAGGGCGTCTCCCC--CCCGGATGGGGCCT---CACC--CCCA s panTro4.chr3_GL389630_random 18169 217 - 103936 GAGGCCGAGG-CGGGGACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATTAAGCAAGGACCCGTGACACTCACTGAGCTAGGCTAGAGTGCAAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GGGT-----------------------------------------------------------------CCTGGGGCTCCCG-TTCCAGGAGGAAACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGAGGGCGTC-ACCC--CCTGGATGGGGCCT---CACC--CCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 171828 219 - 20583478 GAGGCCAAGGAGGGGGACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATTAAGCAAAGACCCATGACAGTCACTGAACTTCGCTGGACTGTGAGGGTGCAGAGACGGGTGAGGAAGGTGCTG-GGGT-----------------------------------------------------------------CCTGGGGCTCCCTCTTTCAGGAGGAAACAG----GTATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CATGGTGGGAGGGGGTC-TCCC--TCTGGATGAGGACT---CACC--CTCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2831185 219 - 123690457 GAGGCCAAGGAGGGGGACAGAATGGAAAACCCTTCACTCT-CAACAAACATT-ATGAAACAAGGACCCATGACAGTCACTGAGCTAGGCCAGAGTGTGAGGGTGCAGAGACAGGTGAGGAAGGTGCTG-GGGT-----------------------------------------------------------------CCTAGGGCTTGCG-TTCCAGGAGGAAACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGAGGGGGTCTCCCC--CCTGGATGGGTCCT---CACC--CCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80717 218 - 111706 GAGGCTGAGGAGGGGGACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAT-GGTGAGGAATGTGCTG-GGGT-----------------------------------------------------------------CCTGGGGCTCCCG-TTCCAGGAGGAAACAG----GGATGAATACACCCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGAGGGGATCTCCCC--TCTGGATGGGGCCT---CACC--CCCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192393987 302 - 192460366 GAGGCTGAGGAGGGGGACAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTCGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GGGT-----------------------------------------------------------------CCTGGGGCTCCCG-TTCCAGGAGGAAACAG----GGATGAATACACCCATCAAGGTGGGAGGGGGTCTCCCCTGGGGCTCCTGTTCCAGGAGGAAACAGGGATGAATACATGCATCAAGGTGTATGTATTG--------------------------ATG---CAAGGTGGGAGGGGATCTCCCC--TCTGGATGGGGCCT---CACC--CCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187314610 283 + 187378091 gaggctgaggagggggaCAGAATGGAAAACCCTTCACTCA-CAACAAACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAT-GGTGAGGAATGTGCTG-GGGT-----------------------------------------------------------------CCTGGGGCTCCCG-TTCCAGGAGGAAACAG----GGATGAATATACCCATCAAGGTAGGAGGGGGTCTCCCCTGGGGCTCC------------------------------------------------TGTTCCAGGAGGAAACAGGGATGAATACATGCATCAAGGTGGGAGGGGATCTCCCC--TCTGGATGGGGCCT---CACC--CCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91339675 282 + 91754291 GAGGCTGAGGA-GGGGACAGAACGGAAAACCCTTCACTCA-CAACACACATT-ATTAAGCAAGGACCCGCGACAGTCACTGGGCTAGGTTAGAGTGCGAGGATGCAGAGAC-GGTGAGGAATGTGCTG-GGGTCCTGCGGCTCCCGTTCCAGGAGGAAACAGGGATGGATACACCCATCCAGGTGGGAGGGGGTCTCCCCTGGGGCTCCTG-TTCCAGGAGGAAACAG----GGATGAATACATGCAT-----------------------------------------------------------------------------------------------------------------CAAGGTGGGAGGGGGTCTCCCC--TCTGGATGGGGCCT---CACC--CCCA i chlSab2.chr15 I 884 C 0 s calJac3.chr17 73819481 215 + 74750902 GAGGCCTAGGATGGGGAGAGAATGGAAAACCCTCCCCTCA-CAAA------T-ATTAAACAAGGACCCGTGACCGTCACTGGACTAGGCTAGAGGGCGAGGATGCAGAGATAGGTGAGAAATGTATCC-AGGT-----------------------------------------------------------------CCTGGGACTCACA-TTCAAGGAGGAAACAG----GGGTGAATAAACGGAT-----------------------------------------------------------------------------------------------------------------CAAGGCGGGAGAGGCTCTCCTC--TGTGTATGGGGCCT---CACCCACCCA i calJac3.chr17 C 0 I 257 s mm10.chr16 32778555 170 + 98207768 ATGGCAGAAG-----GGAAGAATGCCACATTCTTCACCCA-CTGAATAT-TT-ATTAAGCAAGGACCCAGGTCAGTCACTGACCTGAGCCTGGGTGTGGGAATGAAAAG---AGCAA---------------------------------------------------------------------------------TCTAGGCCCCACA-TT---------------------------------------------------------------------------------------------------------------------------------------------------CAAAATTGGGAGAGACCTCTCTAATCCTCATTAGGCCTATATCCT--CCCA i mm10.chr16 I 1 I 1 s canFam3.chr33 2310009 214 - 31377067 GAGGCAGGGA--------GGTGTGCAGAGTCCTTGACTCTCCAGCAAATGTTCAGTAAGCAGGGACCCACGAGGGCCACCAGGCTAGGCTGGGGCGTGGGGATGCAGAT---GGTGAGAAGCAGTCTGTGGGT-----------------------------------------------------------------CCTGGTGCTCGTG-TGCAAAACGGAGCCAGATGTGGACAAATAAGTACAT-----------------------------------------------------------------------------------------------------------------GCAAGTGGGAGAGG-TGTCCTC--TTCGGGTGGGGCCT---CACT--CCCA i canFam3.chr33 C 0 C 0 a score=2011302.000000 s hg38.chr3_KI270937v1_alt 43438 588 + 165607 --CC--CCCA-TCTGCCATCCTCTAACCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGTGT-CCCCCTAagcccccagat-ctcttcctcatcccccaccccc-agccccccaccccccc--------TCACCGTTGCCCTCCCACACAGCGATTCT---GCAGCACCGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCGGTCATTGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCCAC------------GG------------AGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCGGGGAAGACGTGCGCGATGTGACAGCCCGTGAGTCCGTCCATTCCGGGGACACTATGGGGGTC------------ACTGC-GGGGGGC------------------------------GGGCAAACAGA-GGTGCTTCA-----GCCCACA---CAAACAAGCTAATTGAGTTTTTCTGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGCT--TTTTAGATTCGAGAGCAGGAGCAGCCAGCACTGCT s panTro4.chr3_GL389630_random 18386 596 - 103936 --CC--CCCA-TCCGCCATCCTCTAACCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGGA------ACGAATGTAAGTGGGACTGTGT-CCCCCTGAGCCCCCAGAT-CTCTTCCTCATCCCCCAccccc-agccccccagccccccagccccccTCACCGTTGCCCTCCCACACAGCGATTCC---GCAGTACCGGCCTCGGGAAGCCCCATCCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTCGGGGCCCCGTCATTGACTTCCTGAACAACCAGCTGCTGGTCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCCAC------------GG------------AGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGACGTGTCAGCCCGTGAGTCCGTCCATTCCGGGGACACTATGGGGGTC------------ACTGC-GGGGGGC------------------------------GGGTAAACAGA-GGTGCTTCA-----GCCCACA---CAAACAAGCTAATTGAGTTTTTCTGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTGTCCAGCTGCT--TTTTAGATTCAAGAGCAGGAGCAGCCAGCGCTGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 172047 589 - 20583478 --CC--CCCA-TCTGCCATCGTCTGGCCTAGGTGGCATACAGACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCGAAGTGAA------ACGAATGTAAGTGGGACTGTGT-CCCCCTGAGCCCCCAGAtcctcttcctcatcccccaccccctagccccctaggccccc--------tcaccgtcgccctcccACACAGTGATTCC---CCAGCACCGGCCTCGGGAAGCCCCATTCAACAGTGGATGGTCATCTCGGAGTTCCAGTACCGTCCTCGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAC---GTTCCAT------------GG------------AGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGATGTGACAGCCCGTGAGTCCGTCCATTCCGGGGACACTATGGGGGTC------------ACTGC--GGGGGC------------------------------GGGTAAACAGA-GGTGCTTCA-----GCCCACA---CAAACAAGCTAATTGAGTTTTTCTGTTTGTTTGGTTTTGAGCGAAAACG-TGAACATTTTATCCAGCCGCT--TGTTAGATTCAAGAGCAGGAGCAGCCAGCGCTGCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2831404 584 - 123690457 --CC--CCCA-TCCCCCATCCTCTGGCCTAGGTGGCATACAGACTGGGATCCCTGGACATGCGGGCCTTTCTCCACAACAGCCAAGTGAA------ACAAATGTAAGTGGGACTGTGT-CTCCCTGAGCCCCCAGATCCTCTTCCTCATCCCCCACCCCC-AGCCCCCCAGCCCCC---------TCACTGTCGCCCTCCCACACAGCGATTCC---CCAGCACCGGCCTCGGGAAGCCCCATTCAACACTGGGTAGTCATCTCAGAGTTCCAGTACCGCCCTCGGGGCCCTGTCATCGACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTATACCAT---GTTCCAC------------GG------------AGGAGTGAGAAGCCCAGGAATGACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGCGCGACGTGTCAGCCCGTGAGTCCGTCCATTCCGGGGACAGTATGGGGGTC------------ACTGC-GGGGGGC------------------------------GGGTAAACAGA-GGTGCTTCA-----GCCCACA---CAAACAAGCTAACTGAGTTTTTC----TGTTTGGTTTTGAGCGAAAACG-TGAACATTTTATCCAGCTGCT--TTTTAGATTCAGGAGCAGGAGCAGCCAGCGCTGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 80935 584 - 111706 --CCCGCCCA-TCCCCCATCCTCTGTCCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGTGT-CCCCCTGAGCCCCCAGGTCCTCTTCCTCATCCCCCGCTCCC--------TGGCCCCCC--------TCACCGTCACCCTCCCACACAGCGATTCC---CCAGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTAGTGGAGGCGTTCTTCTACCAG---GTTCCAC------------GG------------AGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATGTGACAGCCCGTGAGTCCATCCATTCCAGGGACAATGTGGGGGTC------------ACTGC-AGGGGGC------------------------------GGGTAAACGGA-GGTGCTTCC-----GCCCACA---CAAACAAGTTAGTTGAGTTTTTCTGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTCC--TTTTAGATTCAAGAGCAGGAGTAGCCAGCACTGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192394289 584 - 192460366 --CCCGCCCA-TCCCCCATCCTCTGTCCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAGGTGAA------CCGAATGTAAGTGGGACTGTGT-CCCCCTGAGCCCCCAGGTCCTCTTCCTCATCCCCCGCTCCC--------TGGCCCCCC--------TCACCGTCACCCTCCCACACAGCGATTCC---CCAGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTAGTGGAGGCGTTCTTCTACCAG---GTTCCAC------------GG------------AGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATGTGACAGCCCGTGAGTCCATCCATTCCAGGGACAATGTGGGGGTC------------ACTGC-AGGGGGC------------------------------GGGTAAACGGA-GGTGCTTCC-----GCCCACA---CAAACAAGTTAGTTGAGTTTTTCTGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTCC--TTTTAGATTCAAGAGCAGGAGCAGCCAGCACTGCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187314893 584 + 187378091 --CCCGCCCA-TCCCCCATCCTCTGTCCTAGGTGGCATACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGTGt-ccccctgagcccccaggtcctcttcctcatcccccgctccc--------tggcccccc--------tcaccgtcaccctcccACACAGCAATTCC---CCAGCACCTGCCTCGGGAAGCCCCATTCAACACTGGATGGTCATCTCGGGGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCGGTGGTGGAGGCGTTCTTATACCAG---GTTCCAC------------GG------------AGGAGGGAGGAGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATGTGAGAGCCCGTGAGTCCATCCATTCCGGGGACAGTGTGGGGGTC------------ACTGC-AGGGGGC------------------------------GGGTAAACGGA-GGTGCTTCC-----GCCCACA---CAAACAAGTTAGTTgagtttttctgtttgcttggttttGAGAGAAAACG-TGAACATTTTATCCAGCTTCC--TTTTAGATTCAAGAGCAGGAGCAGCCAGCACTGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91339957 582 + 91754291 --CCCGCCCA-TCCCCCATCCTCTGTCCTAGGTGGCGTACATACTGGGGACCCTGGACATGCGGGCCTTTCTCCGCAACAGCCAAGTGAA------CCGAATGTAAGTGGGACTGTGTCCCCCCTGAGCCCCCAGGTCCTCTTCCTCATCCCCCGCTCCC--------TGGCCCCCC--------TCACCGTCACCCTCCCACACAGCGATTCC---CCAGCACCGGCCTCGGGAAGCCCCATTCAACACTGGAGGGTCATCTCGGAGTTCCAGTACCGCCCTTGGGGCCCCGTCATCGACTTCCTGAACAACCAGCTGCTGGCTGCAGTGGTGGAGGCGTTCTTATACCAG---GTTCCAC------------GG------------AGGAGTGAGGTGTCCAGGAACCACGTGGTCTTCCAGCCCATCTCCAGGGAAGACGTGTGGGATGTGACAGCCCGTGAGTCCATCCATTCCGGGGACAGTGTGGGGGTC------------ACTGC-AGGGGGT------------------------------GGGTAAACGGA-GGTGCTTCC-----GCCCACA---CAAACAAGTTAGTTGAGTTTTTCTGTTTGCTTGGTTTTGAGAGAAAACG-TGAACATTTTATCCAGCTTCC--GTTTAGATTCAAGAGCAGGAGCACCCAGCA---CT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73819953 574 + 74750902 --CC--CCCATTCCCTCATCCTCTGCCCTAGGTGGCGTACAGACTGCGGACCCTGCACGGGCAGGCCTTTCTCTACAACAGCGAAGTGAA------CCAAATGTAAGTGGGACGGTG--ACCCCTGAGCCCCCACGTCTTCTTCCTCA----CCGGCCCC--------CAGCCCCCC--------TCACCGTTGCCCTCCCATACAGCGATTCC---CCAGCACCAGCCTCAGGAAGCCCCATGCAATACTGGACGGTCATGTCGCAGTTCCAGTACCGCCCTTGGGGCCCTGTCATCCACTTCCTGAACAACCAGCTGCTGGCCGCGGTGGTGGAGGCGTTCTTACACCAGCATGTTCCCC------------GG------------AGGAGTGAGGAGCCCAGGAACGACGTGGTCTTCCAGCCCCTCTCCAGGGAAGACGTGCGCGATGTGGCGGCCCGTGAGTCAGTCCATCCCGGGGACAGTGT-GGGGTG------------ACTGGGGGGGGGC------------------------------GGGTAAACCGAGGGTGCTTCA-----GCCCACA---CATGCAAGTTAATTTAGTTTTTC--TTTGTTTGATTCTGAGAGAAAACG-TGAACATTTTATCCATCCGCT--TTTTAGATTCAAGAGCAGGA------AGTGCTGCT i calJac3.chr17 I 257 C 0 s mm10.chr16 32778726 633 + 98207768 --CC--CCCA-TCT----TCCTCCATTGTAGGTGGCGAACATACTAGAGAACCTGGACATGCGGGCTTTTTTCTCCAACAGCTTAGTGGAACTGATACGAACGTAAGTGAAGCTGT---CCCCCATGGCTCCC-----CTCTCCCTC-TCTCCTGCTCCT--------CAAACCCCC---------CACTGTACCCCTTCCATACAGCTCTCCC---GGAGCACAGCCCTCGAGCAAGTCCATTCATCACTGGAAGGTCACCTCCCACTTCAAGTACCGTCCCAGGGGCCCGCTCATCCACTATCTGAACAACCAGCTGATAGGCGCCGTGATGGAGGCCTTCCTCCTGCAG---GCTCGGCAGGAGAGGCAGAAG------------AGGAGTGGAGAAGCCAGGAAGGACGTCCACTTCTTCCCCATCTCGAGGGCAGATGTCCAGGACCAGATGGCTCGTGAGTCA--CTATCTTGGAGACAATGGAGGGATTTGTTAGAGGAGAAAAGC-AGAGGGCCATGACAGATCTGCAGGCCATGTCAACCCTTGGTAGAAAGT-AATGTGTGCAGCAGGTCCACAGCTGAAGCAGGTTAAGTTAGCTTGGATGTCTGTAAATCTTTGAATGAA---T-TTAAAACTTCCCACAACAGCTACTTTTAGACTC-AGAACAGGGACACAAGATGTAGCT i mm10.chr16 I 1 I 387 s canFam3.chr33 2310223 562 - 31377067 CGCC--CCCA--CCCCCATCCT-TGCCCTAGGTGGCCTACAGACTGGGGAACCTGAATGTGCGGGCCTTTCTCCAGAACTCCGAAGTGCT------ACAGATGTAAGTGGGACTGT---CCCCCTTGGCCCCCGCGTCTCCCCCCTCCACCTGCACCCTT-----------ACCACC--------TCACGGTGCCCCTCCCACGCAGCAATTCCAGTGCAGCGCCGGCCTCGGGAAGTTTACGTAGACACTGGAGAGTCTTCTCGAAGTTCCAGTACCTTCCTCAGGGTCCCGTCATCGACTTCCTGAACACCAAGCTGCTGGATGCAGTGGTGGAAGCGTTCTTACCCCAG---GCCTCGT------------GGTGGAGGAAGAACAGAAGTGGGAGGCCCAGGACCGACGTGAACTTCCACTCCATCTCCAGGGAAGACGTGCACAGTGTGCTGGCTCGTGAGTCACTC--TCCTGGCCATAGTCACAGAGAC------------AGCCA-AGGGGGC------------------------------AGGTGAACAGG-GG------------GACTAGA------------------------TTTTTTTTATCATTTTTGAGGGAAATCGTTAAACATTTCACCCACCAGCT--TTCTAGACTCAAGAGCA-GAGCACCAAACATTGCT i canFam3.chr33 C 0 C 0 a score=748751.000000 s hg38.chr3_KI270937v1_alt 44026 252 + 165607 -GAGGCAGTCACACGTATACAGCTTCACGGAGCAAGCACCC-AGCCAGGGCCTTGCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTAGTTTC-----ATAAAATTGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACACCCCCATCGTCTCTGCTCTCCAGCGGGAGGATATGAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTACTCCCTGAAATGGTGTCACCCTGTGCA s panTro4.chr3_GL389630_random 18982 252 - 103936 -GAGGCAGTCACACGTATACAGCTTCACGGAGCAAGCACCC-AGCCAGGGCCTTGCTGACTGTGGCTGCTAATAAAACAGCAGCAATTTAGTTTC-----ATAAAATTGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAGCATACACAGGGACACCCCCATCGTCTCTGCCCTCCAGCGGGAGGATATGAAGCTGGAGACTGGAGACTGG--CTGGGGACAGAGGCAACTACTCCCTGAAATGGTGTCACCCTGTGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 172636 252 - 20583478 -AAGGCAGTCACACGTACACAGCTTCACGGAGCAAGTACCC-AGCCAGGGCCTTGCTTACTATGGCTGCTAATAAAACAGCAGCAATTTATTTTC-----ATAAAATTGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAACATACACAGGGACACCCCCATCGTCTCTGCCCTCCAGCGGGAGGATATGAAGCTGGAGACTGGAGACTAG--CCAGGGACAGAGGCAACTACTCCCTGAAATGATGTCACCCTGTGCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2831988 252 - 123690457 -AAGGCAGTCACATGCAGACAGCTTCACAGAGCAAGTACCC-AGCCAGGGCCTTGCTGACTGTGGCTGCTAATCAAACAGCAGCAATTCATTTTC-----ATAAAATTGCTAATAGTTTTCTTAAAATGCCATTGCATT---TAAACATACACAGCGACACCCCCATCGTCTCTGCCCTCTAGCGGGAGGATATGAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTACTCCCTGAAATGATGTGACCCTGTGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 81519 252 - 111706 -AAGGCAGTCCCATGTATGCAGCTTCACAGAGCAAGTACTC-AGCCAGGGCCTTGCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAACATTGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACACCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTCTTCCCTGAAATGATGTGACCCTGTGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192394873 252 - 192460366 -AAGGCAGTCCCATGTATGCAGCTTCACAGAGCAAGTACTC-AGCCAGGGCCTTGCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----ATAACATTGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACACCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTCTTCCCTGAAATGATGTGACCCTGTGCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315477 252 + 187378091 -AAGGCAGCCCCATGTATGCAGCTTCACAGAGCAAGTACTC-AGCCAGGGCCTTGCTGACTGTGGCCGCTAATAAAACAGCAGCAATTTATTTTC-----AGAACATTGCTAATAGTTTTCTTAAGATGCCATTGCACT---TAAACATACACAAGGACACCCCCATCATGTCTGTCCTCCAGCTGCAGGCTATTAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTCTTCCCTGAAATGATGTGACCCTGTGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340539 252 + 91754291 -AAGACAGTCACATGTATGCAGCTTCACAGAGCAAGTACCC-AGCCAGGGCCTTGCTGACCGTGGCTGCTAATAAAACAGCAGCAATTTATTTTC-----ATAACATTGCTAATAGTTTTCTTAAAATGCCATTGCACT---TAAACATATACAAGGACACCCCCATCATGTCTGTCCTCCAGCTGCAGGATATTAAGCTGGAGACTGGAGACTGG--CCAGGGACAGAGGCAACTCTTCCCTGAAATGATGGGACTCTGTGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73820527 216 + 74750902 -AAGGCAGCCACGTGCCTGCGGTTTCACAGAGCGAGTGCTC-CGGCCCAGCCTTGCTGACTGCCGCTGCTCAGGAAACAGCAGCAATTTGTTTTC-----ATAAAATTGCTACTGGTTTTCTGAAAGTGCCATTGCACT---TAAACCTACACAAGGGCATTCCCGTCATCTCTGCCCTCCAGCTGGTGGGTGTGAAGCTGGAGACTGG------------------------------CCCGGAAATGA--------TCTGCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2310785 250 - 31377067 TGGTGAGTCCCCAGGGATATGGTTTCACAGACCAATTACTCTAATTGCCACCTTCCTGACCATCACTGCTGA-----------CGGTTTTCTTTCTTTTGATGAAATTGGTAATGATTTTGTTAAAAAACCATTGTGCTTTATAAACATAAACAAGGACATCCCTTTTGCCTTTGCCCTCCAGCTGGAGGAAATTCAGTTGAAGGCTGGAGACCTGACCTAGGGGCAGAGGTTTCCCCTCCTTGAA---GGgtgaccctgtgca i canFam3.chr33 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I a score=46240.000000 s hg38.chr3_KI270937v1_alt 44278 15 + 165607 AGCACCTTCCCCAGG s panTro4.chr3_GL389630_random 19234 15 - 103936 AGCACCTTccccagg i panTro4.chr3_GL389630_random C 0 I 224 s ponAbe2.chr3_random 172888 15 - 20583478 AGCACCTTCCCCAGG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832240 15 - 123690457 AGCCCCTTCCCCAGG i nomLeu3.chr11 C 0 I 34 s rheMac3.chrUn_JH291127 81771 15 - 111706 ACCACCTTCCCCAGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395125 15 - 192460366 ACCACCTTCCCCAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315729 15 + 187378091 ACCACCttccccagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340791 15 + 91754291 ACCACCTTCCCCAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73820743 15 + 74750902 AGCACCTTCCCCAGG i calJac3.chr17 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e canFam3.chr33 2311035 0 - 31377067 C a score=5400.000000 s hg38.chr3_KI270937v1_alt 44293 2 + 165607 CC s panTro4.chr3_GL389630_random 19473 2 - 103936 cc i panTro4.chr3_GL389630_random I 224 C 0 s ponAbe2.chr3_random 172903 2 - 20583478 CC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832289 2 - 123690457 CG i nomLeu3.chr11 I 34 C 0 s rheMac3.chrUn_JH291127 81786 2 - 111706 cc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395140 2 - 192460366 CC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315744 2 + 187378091 cc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340806 2 + 91754291 CC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73820758 2 + 74750902 CC i calJac3.chr17 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e canFam3.chr33 2311035 0 - 31377067 C a score=104631.000000 s hg38.chr3_KI270937v1_alt 44295 49 + 165607 AGGCCAGGCCTCAACACCCCCC--------------------------------------------------------------------AGCACCTTCCCCAGGCCAGGCCAGGCC s panTro4.chr3_GL389630_random 19475 49 - 103936 aggccaggcctcaacacccccc--------------------------------------------------------------------agcaccttccccaggccaggccaggcc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 172905 49 - 20583478 AGGCCAGGCCTCAACACCCCCC--------------------------------------------------------------------AGCACCTTCCCCAGGCCACGCCAGGCC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832291 49 - 123690457 AGGCCAGGCCTCAACACCCCCA--------------------------------------------------------------------AGCACCTTCCCCAGGCCAGGCCAGGCC i nomLeu3.chr11 C 0 I 292 s rheMac3.chrUn_JH291127 81788 49 - 111706 aggccaggcctcaacacccccc--------------------------------------------------------------------agcaccttctccaggccaggccaggcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395142 83 - 192460366 AGGCCAGGCCTCAACACCCCTC----------------------------------AGCACCTTCCCCAGGCGAGGCCTCAACACCCCCAAGCACCTTCCCCAGGCCAGGCCAGGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315746 117 + 187378091 aggccaggcctcaacaccccccagcattttccccaggccaggcctcaacaccccccagcaccttccccaggccaggccTCAATACTCCCCAGCACCTTCccaaggccaggccaggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340808 49 + 91754291 AGGCCAGGCCTCAACACTCCCC--------------------------------------------------------------------AGCACCTTCCCCAGGCCAGGCCAGGCC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311035 0 - 31377067 C a score=100677.000000 s hg38.chr3_KI270937v1_alt 44344 57 + 165607 TCAACACCCCCCAGCACCTTCCCCAGGCCAGGCCTCAACACCCCC------------------------------------------------------------------------------CAGCACCTCCCC s panTro4.chr3_GL389630_random 19524 57 - 103936 tcaacaccccccagcaccttccccaggccaggcctcaacaccccc------------------------------------------------------------------------------cagcaccttccc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 172954 57 - 20583478 TCAATACTCCCCAGCACCTTCCCCAGGCCAGGCCTCAACACCCCC------------------------------------------------------------------------------CACCACCTTCCC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832632 57 - 123690457 TCAACACCCCCCAGCACCTTCCCCAGGCCAGGCCTCAACACCCCC------------------------------------------------------------------------------CAGCACCTTCCC i nomLeu3.chr11 I 292 C 0 s rheMac3.chrUn_JH291127 81837 57 - 111706 tcaacaccccccagcaccttccccagaccaggcctcaacgctcct------------------------------------------------------------------------------cagcaccttccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395225 135 - 192460366 TCAACACCCCCCAGCACCTTCCCCAGGCCAGGCCTCAACACCCCTAAGCACCTTCCCCAGGCCAGGCCAGGCCTCAACACCCCCCAGCACCTTCCCCAGGCCAGGCCAGGCCTCAACACCCCCCAGCACCTTCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315863 57 + 187378091 tcaACACCCCCCAGCACCTTCCCCAGGCCAGGCCTCAACACTCCT------------------------------------------------------------------------------CAGCACCTTCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340857 34 + 91754291 TCAACACCCCCAAGCACCTTCCCCAGGCCAGGCC----------------------------------------------------------------------------------------------------- i chlSab2.chr15 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311035 0 - 31377067 C a score=20872.000000 s hg38.chr3_KI270937v1_alt 44401 15 + 165607 GAGGCCAGGCC-----TCAA s panTro4.chr3_GL389630_random 19581 20 - 103936 caggccAGGCCAGGCCTCAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173011 15 - 20583478 CAGGCCAGGCC-----TCAA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832689 15 - 123690457 CAGGCCAGGCC-----TCAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 81894 15 - 111706 caggcgaggcc-----tcaa i rheMac3.chrUn_JH291127 C 0 I 287 s macFas5.chr2 192395360 15 - 192460366 CAGGCCAGGCC-----TCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315920 15 + 187378091 CAGGCAAGGCC-----TCAA i papAnu2.chr2 C 0 I 10 s chlSab2.chr15 91340891 9 + 91754291 ------AGGCC-----TCAG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2311035 7 - 31377067 gaagcca------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C a score=6693.000000 s hg38.chr3_KI270937v1_alt 44416 3 + 165607 CAC s panTro4.chr3_GL389630_random 19601 3 - 103936 CAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173026 3 - 20583478 CGC i ponAbe2.chr3_random C 0 I 234 s nomLeu3.chr11 2832704 3 - 123690457 CAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82196 3 - 111706 CAC i rheMac3.chrUn_JH291127 I 287 C 0 s macFas5.chr2 192395375 3 - 192460366 CGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187315945 3 + 187378091 CAC i papAnu2.chr2 I 10 C 0 s chlSab2.chr15 91340900 3 + 91754291 CAC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311042 0 - 31377067 C a score=205.000000 s hg38.chr3_KI270937v1_alt 44419 1 + 165607 T s nomLeu3.chr11 2832707 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82199 1 - 111706 C i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395378 1 - 192460366 T i macFas5.chr2 C 0 I 184 s papAnu2.chr2 187315948 1 + 187378091 C i papAnu2.chr2 C 0 I 28 e ponAbe2.chr3_random 173029 234 - 20583478 I e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311042 0 - 31377067 C e chlSab2.chr15 91340903 0 + 91754291 C e panTro4.chr3_GL389630_random 19604 0 - 103936 C a score=11945.000000 s hg38.chr3_KI270937v1_alt 44420 5 + 165607 CCCca s panTro4.chr3_GL389630_random 19604 5 - 103936 CCCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173263 5 - 20583478 CCCca i ponAbe2.chr3_random I 234 C 0 s nomLeu3.chr11 2832708 5 - 123690457 CCCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82200 5 - 111706 CCCCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395563 5 - 192460366 CCCCG i macFas5.chr2 I 184 C 0 s papAnu2.chr2 187315977 5 + 187378091 CCCCA i papAnu2.chr2 I 28 I 190 s chlSab2.chr15 91340903 5 + 91754291 CCCCG i chlSab2.chr15 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311042 0 - 31377067 C a score=8148.000000 s hg38.chr3_KI270937v1_alt 44425 3 + 165607 agc s panTro4.chr3_GL389630_random 19609 3 - 103936 AGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173268 3 - 20583478 agc i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832713 3 - 123690457 AGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82205 3 - 111706 AGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395568 3 - 192460366 AGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316172 3 + 187378091 AGC i papAnu2.chr2 I 190 C 0 s chlSab2.chr15 91340908 3 + 91754291 AGC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32779359 387 + 98207768 I e calJac3.chr17 73820760 0 + 74750902 C e canFam3.chr33 2311042 0 - 31377067 C a score=56108.000000 s hg38.chr3_KI270937v1_alt 44428 19 + 165607 accttccccaggccaggcc s panTro4.chr3_GL389630_random 19612 19 - 103936 ACCTTCCCCAGGCCAGGcc i panTro4.chr3_GL389630_random C 0 I 5 s ponAbe2.chr3_random 173271 19 - 20583478 accttccccaggctaggcc i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832716 19 - 123690457 ACCTTCCCCAGGCCAGGCC i nomLeu3.chr11 C 0 I 78 s rheMac3.chrUn_JH291127 82208 19 - 111706 ACcttccccaggccaggcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395571 19 - 192460366 ACCTTCCCCAGGccaggcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316175 19 + 187378091 ACCTTCCCCAGGCCAGGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340911 19 + 91754291 ACCTTCCCCAGGccaggcc i chlSab2.chr15 C 0 C 0 s mm10.chr16 32779746 19 + 98207768 GCCCAACTCAAGCCAGAAC i mm10.chr16 I 387 C 0 s canFam3.chr33 2311042 15 - 31377067 ---tcccccatccaaggc- i canFam3.chr33 C 0 C 0 e calJac3.chr17 73820760 0 + 74750902 C a score=1030404.000000 s hg38.chr3_KI270937v1_alt 44447 304 + 165607 tcagcacccccatct-gaaaatgagatgggatttctgagccccctttcagtgctgacagc----ccccggttttCCTGGAACAGGAATA-----AGTTGGCAAGCTTGTCAGAGAAACAAAGGAATAACACG--TCCTATTTTCTG-TATAGGGCAGAGAACAGGGCAGGGGC--CGCCCCAAACACAACAGGAACTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCCAGAATCCAGGCTAAGCCCGCTCTCTCCC-GGAGCAGG-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG s panTro4.chr3_GL389630_random 19636 303 - 103936 tcagcacccccatct-gaaa-tgagatgggatttctgagccccctttcagtgctgacagc----ccccggttctCCCGGAACAGGAATA-----AGTTGGCAAGCTTGTCAGAGAAACAAAGGAATAACACG--TCCTATTTTCTG-TATAGGGCAGAGAACAGGGCAGGGGC--TGCCCCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCCAGAATCCAGGCTAAGCCCGCTCTCTCCC-GGAGCAGG-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i panTro4.chr3_GL389630_random I 5 C 0 s ponAbe2.chr3_random 173290 304 - 20583478 tcagcacccctatct-gaaaatgagatgggatttctgagccccctttcagtgctgacagc----ccctggttctCCCGGAACAGGAATA-----AGTTGGCAAGCTTGTCAGAGAAACAAAGGAATAACACA--TCCTATTTTCTG-TATAGGGCAGAGAACAGGGCAGGGGC--CGCCTCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCCAGAATCCAGGCTAAGCCAGCTCTCTCCC-GGAGCAGT-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2832813 299 - 123690457 tcagcacccccatct-gaaaatgagatgggatttctgagccccctttcagtgctgacagc----ccctgtttctTCCAGAACAGGAATA-----AGTTGGCAAGCTTGGCAGAGAAACAAAGGAATAACGCA--TCCTATTTTCTG-TATAGGG-------CAGGGCAGTGGCCACACCCCAAACACAACAGAAACTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCCAGAATCCAGGCTAAGCCCACTCTCTCCC-GGAGCAGG-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i nomLeu3.chr11 I 78 C 0 s rheMac3.chrUn_JH291127 82227 304 - 111706 tcagcacccccatct-gaaaatgagatgagatttctgagccccctttcagtgctgacagc----ccctggttctCCTGGAACAGGTATA-----AGTTGGCAAGCTTGTCAGAGTAACAAACGAATAACACA--TCCTATTTTCTG-TATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCTAGAATGCAGGCTAAGCCTGCTCTCTCCT-GGAGCAGT-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395590 304 - 192460366 tcagcacccccatct-gaaaatgagatgagatttctgagccccctttcagtgctgacagc----ccctggttctCCTGGAACAGGTATA-----AGTTGGCAAGCTTGTCAGAGTAACAAACGAATAACACA--TCCTATTTTCTG-TATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGTTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCTAGAATGCAGGCTAAGCCTGCTCTCTCCT-GGAGCAGT-GGGTGAAATCTCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316194 304 + 187378091 TCAGCACCCCCATCT-GAAAATGAGATGGGATTTCTGAGCCCCCTTTCAGTGCTGACAGC----CCCTGGTTCTCCTGGAACAGGTATA-----AGTTGGCAAGCTTGTCAGAGTAACAAAGGAGTAACACA--TCCTATTTTCTG-TATAGGGCAGAGAATAGGGCAGTGGC--CACCCCAAACACAACAGAAAGTGCTGGTTTACTTGGGTCTGGGACCAAGCAAGAGCTTCTCCTAGAATGCAGGCTAAGCCTGCTCTCTCCT-GGAGCAGT-GGGTGAAATCCCTCAGAACTACTGTATGT--------TGGGGAGTTGGGGTAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91340930 296 + 91754291 tcagcacccccatct-gaaaatgagatgggatttctgagccccctttccgtgctgacagc----ccctggttctCCTGGAACAGGTATA-----AGTTGGCAAGCTTGTCAGAGTAACAAAGGAATAACACA--TCCTATTTTCTG-TATAGGGCAGAGAATAGGGCAGTGGC--CACCTCAAACACAACAGAAAGTGCTGTTTTACTTGGTTCTGGGACCAAGCAAGAGCTTCTCCTAGAATGCAGGCTAAGCCTGCTCTCTCCT-GGAGCAGT-GGGTGAAATCCCTCAGAACTACTTTATGT--------TGGGGAGT-------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73820760 308 + 74750902 TCA-CACCCCCACCT-GAAAATGAGGTGGGATTTCTGAGCCCCGTTTCAGTGCTGACAGCCCAGCCCCTGTTCTCCCAGAACAGGAATG-----AGTTGGCAAGCTTGTCAGAGAAAGAAAAGAATAACGCA--CCCTATTTTCTG-GATGGGGCAGAGAATAGAGCAGCGGC--CATCCCAAACACAACAGAAACTGCTGTTTTACTCGGGTCCAGGAGCAAGCAAGAGCTTCTTCTAGAATCCAGGTTAAGCCCCCTCTCTCCT-GGAGGAACAAGATGAAATCCCTTAGAACTGCTGTATGT--------TGGCGAGCTGGGGTAG i calJac3.chr17 C 0 I 912 s mm10.chr16 32779765 273 + 98207768 GCATGGTCCCAATGG-GAAAATGGGATGGGGTTT------------------CTGGCAGC----CTCTGGTTCTCCTGG-GCAGGGA--------------------GCAAGGGAGACAGAGGAACAGCCCCCTCCCTAGCTTCTGAAATGGAGCAGAGAATAGGGTAGGGAC--TATGCCCAACTTGGGAGAAACTGCTATTCAACTTGGGTCTAGCACCTGATGAGAGCGGCTTCTAGAAACCAGTTTATGTTTCCTGCCTTTT-GGAGCAGTAAAGTGAAGTCACTCC-AACTACTGTGCAT--------TGGGTAGCTGCAGTGG i mm10.chr16 C 0 I 5 s canFam3.chr33 2311057 285 - 31377067 ttgacacccccatgtggaaaaatagatgggatttctgaggtccccgtcagctgtgatgat----ccctgattACCCCGAAACAAGAATGGGATCAGTTGGTAAGCTTGCCAGAGGAGGAAAGGAATAGACCA--CCCTATCCTAGG-------------AGTGAGGCAGTGAC--CACACCAAACCCTGCGGAAGCCGCTGTGTCACTGAGGG-TGGGATT------------------GAATCCAGGCAGTGCCTCCTCCCTCCTGGGGGCAACAATGTGAAATCCTCCA-AACTACTTTGTGTATGTGTGGTAGGGCGTTAGGG--- i canFam3.chr33 C 0 C 0 a score=68967.000000 s hg38.chr3_KI270937v1_alt 44751 29 + 165607 GAGGCGCAGGGAGGCA--------AG-------CCCTGACTATG s panTro4.chr3_GL389630_random 19939 29 - 103936 GAGGCACAGGGAGGCA--------AG-------CCCTGACTATG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173594 29 - 20583478 GTGGCACAGGGAGGCA--------AG-------CCCTGACTATG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2833112 29 - 123690457 GAGGCGCAGGGAGGCA--------AG-------CCCTGACTATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82531 29 - 111706 GAGGCCCAGGGAGGCA--------AA-------CCCTGACTATG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395894 29 - 192460366 GAGGCCCAGGGAGGCA--------AA-------CCCTGACTATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316498 29 + 187378091 GAGGCCCAGGGAGGCA--------AA-------CCCTGACTATG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341226 13 + 91754291 ------------------------AA-------CCCTGACTATG i chlSab2.chr15 C 0 C 0 s mm10.chr16 32780043 36 + 98207768 CAGGCACAGTCAGGTA--------AGGGGGCATCCCCGACTGTG i mm10.chr16 I 5 I 573 s canFam3.chr33 2311342 37 - 31377067 GTGGCATACGGACACAACTCCCCTAG-------ACCTGACTGTG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73821068 912 + 74750902 I a score=16344.000000 s hg38.chr3_KI270937v1_alt 44780 8 + 165607 ------------------CAATTAAG s panTro4.chr3_GL389630_random 19968 8 - 103936 ------------------CAATTAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173623 8 - 20583478 ------------------CAATTAAG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2833141 8 - 123690457 ------------------CAATTAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82560 8 - 111706 ------------------CAATTAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395923 8 - 192460366 ------------------CAATTAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316527 8 + 187378091 ------------------CAATTAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341239 8 + 91754291 ------------------CAATTAAG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2311379 25 - 31377067 CCTTTTGTTAAAGAAAGCCAACCAA- i canFam3.chr33 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e calJac3.chr17 73821068 912 + 74750902 I a score=1004807.000000 s hg38.chr3_KI270937v1_alt 44788 322 + 165607 GAAAACCTATAAtttttattatacaagcatcgtatgtttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagg---aaaaaaaccc--tgtaatcccaatccccagagagacaacagtatttcctacatatccttctgaactttcttttatgc-ctaggaaccttcagacatcc----attttttactgaa---ggatcaAATCATTCCTAATGTTGGAAAACCTCCTCA-TTAAACAGTTGTGAACAGGTTGTCTCATATATTCTGTCCACATTCCCATTTGACATATTA--TGATGGTATGTTTGAATATAGTGT--CATATTTTA s panTro4.chr3_GL389630_random 19976 321 - 103936 GAAAACCTACAAtttttattatacaagcatcgtacatttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagg---aaaaaaaccc--tgtaatcccaatccccagagagacaacaatatttcgtacatatccttctgaactttcttttatgc-ctaggaaccttcacacattg----attttttattgaa---g-atcaaatcatTCCTAATGCTGGAGAACCTCCTGA-TTAAACAGTTGTGAACAGGTTGTCTCATATATTCTGTCCACATTCCCATTTGCCATATTA--TAATGGTATGTTTGAATATAGTGT--CATATTTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173631 320 - 20583478 GAAAACCTATAAtttttattatacaagcatcgtatgcttattgcagaaactttaggaaacacaaacttaacaaaaagaaaagagg-----aaaacccc--tgtaatcccaatccccagagagacaacaatatttcgtacatatccttctgaactttctcttatgc-ctaggaaccttcatacatcc----attttttattgaa---ggatcaaatcattcataatgttggataacctgctCG-TTAAACAATTGTGAAGCGATTGTCTCATATATTGTGTCCATATTCCCATTCGACATATTA--TAATGTTATGTTTGAATATAGTGT--CACATTTTA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2833149 321 - 123690457 GAAAACCTATAAtttttattatacaagcatcgtatgtttattgcagaaactttaggaaac-caaacttaacaaaaagaaaaaagg---aaaaaaaccc--tgtaatcccaacccccagagagacaacaatatttcatacatatccgtctgaactttcttttatgc-ctaggaaccttcacacatcg----attttttattgaa---ggatcaaatcattcctaatgttggataacctgctCG-TTCAACAATTGTGAACAGGTTGTCTCATATATTGTGTCCATATTCCCATTTGACATATTA--TAATGGTATGTTTGAATATAGTGT--CATATTTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82568 321 - 111706 GAAAACCTATAAtttttattatacaagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagg---gaaaaaaccc--tgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaactttcatttatgc-ctaagaa-cttcacacatcg----attttttaTTGAA---GGATCAAATCATTCCTAATGTTTGATAACCTCCTCG-TTAAACATTTGTGAACAGATTGTCTCATATATTGTATCCATATTCCCATTTGACATATTA--TAATGGTAGGTTTGAATATAGTGT--CATATTTTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192395931 321 - 192460366 GAAAACCTATAAtttttattatacaagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagg---aaaaaaaccc--tgtaatcccaatccccagagagacaacaatattttgtacatatccttctgaactttcatttatgc-ctaagaa-cttcacacatcg----attttttattgaa---ggatcaaatcattcctaatgtttgataacctcctCG-TTAAACATTTGTGAACAGATTGTCTCATATATTGTATCCATATTCCCATTTGACATATTA--TAATGGTAGGTTTGAATATAGTGT--CATATTTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316535 318 + 187378091 GAAaacctataatttttattatacaagtatcctatgtttattgcagaaacTTTAGGAAacacaaatttaacaaaaagaaaagagg---aaaaaacccc--tgtaatcccaatcccCAGAGAG---ACAATATTTTGTACATATCCTTCTGAACTTTTGTTTATGC-CTAAGAA-CTTCACACATCG----ATTTTTTATTGAA---GGATCAAATCATTCCTAATGTTTGATAACCTCCTCG-TTAAACATTTGTGAACAGATTGTCTCACATATTGTATCCATATTCCCATTTGACATATTA--TAATGGTAGGTTTGAATAtagtgt--catatttta i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341247 320 + 91754291 GAAAACCTATAAtttttattatacaagtatcctatgtttattgcagaaactttaggaaacacaaatttaacaaaaagaaaagagg---aaaaaacccc--tgtaatcccaatccccagagagacaacaata-tttgtacatattcttctgaactttcgtttacac-ctaagaa-cttcacatatcg----attttttattgaa---ggatcaaatcattcctaatgtttgataacctcctCG-TTAAACAATTGTGAACAGATTGTCTCATATATTGTATCCATATTCCCATTTGACATATTA--TAATGGTAGGTTTGAATATAGTGT--CATATTTTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73821980 322 + 74750902 GAAAACCTAAAAtttttgttatataagtatcatatgtttactgcagaaactgtaggaaacaaacatttaacaaaaagaagagagaagaaagaaaaacc--tgtaattcccgtgcccagag-----acaatattttgtgcatttccttctgagctttcttttatgc-cgaggaaccttcacacggtg----gctttttactgaa---ggatcaaatcgttcctaatgtttggtaacctccttc-ttCAACAGTTGTGAACAGACAATCTCATGTGCTGTGTCCATGTTCCCATTTCACATATTGCTTTATAATACATTTGAATATAGTGT--CACATTTTA i calJac3.chr17 I 912 C 0 s canFam3.chr33 2311404 329 - 31377067 GAAACCCCACAGtttttattatacaagtacaatatgtttattgtagaaacttgaggagacacaga-ttaacaaaaggaagagaga---aaaaaaatcacgtgtaattccaagccccaaag--acaagtccattttgcacctatccttctgaattttcttttatgcattaggagtcttcacacataccaatattttttataataaggggatcaagtagtacctaatgtttggtgaccttattacttaagcaattgtgaacatattaccttgtatattgtatatgtgttcccatttattattttA--TCA---TACATTTTAATGTGGTGTGCTATAtttta i canFam3.chr33 C 0 I 572 e mm10.chr16 32780079 573 + 98207768 I a score=373348.000000 s hg38.chr3_KI270937v1_alt 45110 131 + 165607 AAATACATTataataatcattaccattgtttgagtgcttactgtgtgtccggcactgtactgagtactgtggacacattatctcatttaaatctcacagcagcataagtgctattatgatcatttcctttt s panTro4.chr3_GL389630_random 20297 127 - 103936 AAATACATTataataatcattaccattg----agtgcttactgtgtgtccggcactgtactgagtactgtggacacattatctcatttaaatctcacagcagcataagtgctattatgatcatttcctttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 173951 131 - 20583478 AAATACATTataataatcattaccattctttgagtgcttactgtgtgtcaggcagtgtactgagtactgtggacacattatcttatttaaatctcacagcagcataagtgctattatgatcatttcctttt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2833470 131 - 123690457 AAATACGTTataataatcattaccatttttggagtgcttactgtgtgtcaggcagtgtactgagtactgtggacacattatctcatttaaatctcacagcagcataagtgctattatgatcatttcctttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 82889 130 - 111706 AAATACATTAGaataatcatttcca-tttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtggacatattacctcatttaaatctcacagcagcataagtgctattatgatcatttcctttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192396252 131 - 192460366 AAATACATTAGaataatcatttccattttttgagtgcttactgtgtgtcaggcagtgtactgagtactgtggacatattacctcatttaaatctcacagcagcataagtgctattatgatcatttcctttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316853 131 + 187378091 aaatacattagaaTAATCATTACCAttttttgagtgcttactgtgtgtcaggcagtgTACTGAGTACTGTGGacatattacctcatttaaatcTCACAGCAGCATAAGTGCTATTATGATCATTTcctttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341567 131 + 91754291 AAATACGTTAGaataatcattaccattttttgattgcttactgtgtgtcaggcagtgtactgagtactgtggacatattaccccatttaaatctcacagcagcataagtgctattatgatcatttcctttt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73822302 121 + 74750902 AAATACGTTataataaccattttcgttttttgagggtttactgtgtgtcaggcagtgtacggagtattgtggacacgttatctcatttaaatctcacagcagcgtaagt----------tcctgtgctttt i calJac3.chr17 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e canFam3.chr33 2311733 572 - 31377067 I a score=400381.000000 s hg38.chr3_KI270937v1_alt 45241 127 + 165607 aaagataaggaaactgaagctgaaagagtgaaggaat-----------------------------gttccctgaattacacatctagttactagcagagtttcagtttccacccaagtctggccaccttcaaagcatgtgctcttCAGGAAAGCA s panTro4.chr3_GL389630_random 20424 127 - 103936 aaagataaggaaactgaagctgaaagagtgaaggaat-----------------------------gttccctgaattacacatctagttactagcagagtttcagtttccacccaagtctggccaccttcaaagcatgtgctcttCAGGAAAGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 174082 127 - 20583478 aaagataaggaaactgaagctgaaagagcgaaggaat-----------------------------gttccctgaattccacatctagttactagtagagtttcagtttccacccaggtctggccaccctcaaagcatgtgctcttCAGGAAAGCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2833601 127 - 123690457 aaagataaggaaactgaagctgaaagagtgaaagagt-----------------------------gttccctgaattacacgtctagtaactagcagagtttcagtttccacccaggtctggccaccttcaaagcatgtgctcttCAGGAAAGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83019 127 - 111706 aaagataaggaaactgacactgaaagagttaaggaat-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagcatacgctctttAGGAAAGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192396383 127 - 192460366 aaagataaggaaactgacactgaaagagttaaggaat-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccaggtctggccaccttcaaagcatacgctctttAGGAAAGCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187316984 127 + 187378091 aaagataaggaaactgacacTGAAAGAGTTAAGGAAT-----------------------------GTTCCCTGAATTACACATCTAGTTACTAGTAGAGTTTCAGTTTCAACCCAGGTCTGGCCACCTTCAAAGCATACGCTCTTTAGAAAAGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341698 126 + 91754291 aaagataaggaaactgacactgaaagagttaa-gaat-----------------------------gttccctgaattacacatctagttactagtagagtttcagtttcaacccgggtctggccaccttcaaagcatacgctctttAGGAAAGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73822423 106 + 74750902 agacataaggaaactgaagctg-cagagataaggagt-----------------------------gttccctgaattacacaactagctaccagt-gagtttgagtttcaactcaggtctggccaccttcaaagcA------------------- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2312305 156 - 31377067 AAagataaggaaactgaggctgaaggagttaagaaatttccccCCCCCCCAAAAAAAAAAaagaaatttccccaaagcacacaactagttagtagtagagcttgaatttcaacgtaggtctggtttacttcaaagcgtatgctcttaaaaaaaaaa i canFam3.chr33 I 572 I 30 e mm10.chr16 32780079 573 + 98207768 I a score=48269.000000 s hg38.chr3_KI270937v1_alt 45368 61 + 165607 TTTTCCATAGGAACCTTTTTCCACAGGAACCTTTTTCCCTAGGAAACTTTTTCCCTAGGAA s panTro4.chr3_GL389630_random 20551 61 - 103936 TTTTCCATAGGAACCTTTTTCCCTAGGAACCTTTTTCCCTAAGAAACTTTTTCCCTAGGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 174209 61 - 20583478 TTTTCCATAGGAAACTTTTTCCATAGGAACCTTTTTCCCTAGGAAACTTTTTCCATAGGAA i ponAbe2.chr3_random C 0 I 2711 s nomLeu3.chr11 2833728 61 - 123690457 TTTTCCCTAGGAACCTTTTTCCATAGGAACCTTTTTCCCTAGGAAACTTTTTCCATAGGAA i nomLeu3.chr11 C 0 I 48 s rheMac3.chrUn_JH291127 83146 29 - 111706 TTTTCCATAGAAAACTTTTTCCATAGGAA-------------------------------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192396510 29 - 192460366 TTTTCCATAGAAAACTTTTTCCATAGGAA-------------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187317111 29 + 187378091 TTTTCCATAGAAAACTTTTTCCATAGGAA-------------------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341824 15 + 91754291 TTTTCCATAGGAAAC---------------------------------------------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73822529 17 + 74750902 -TTTCCATAGGAAACTGG------------------------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 32780079 573 + 98207768 I e canFam3.chr33 2312461 30 - 31377067 I a score=221502.000000 s hg38.chr3_KI270937v1_alt 45429 107 + 165607 ACTTTTTCCATAGGAAGCACCatcccttggtaa--ggatgtgcagtagt--ttatttaaccagaccctacttctgaaa---cgttactattatccaccacactgatctgaacgt s panTro4.chr3_GL389630_random 20612 107 - 103936 ACTTTTTCCATAGGAAGCACCatcccttggtaa--ggatgtgcagtagt--ttatttaaccagactctacttctgaaa---cgttactattatccaccacgctgatctgaacgt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2833837 110 - 123690457 ACTTTTTCCATGGGAACCACCatcccttggtaa--ggatgtgcagtagt--ttatttaaccagaccccacttctgaaatgttgttactattatccaccacgctgatctgaatgt i nomLeu3.chr11 I 48 C 0 s rheMac3.chrUn_JH291127 83175 107 - 111706 ACTTTTTCCATAGGAACTGTCATCCCTTGGTAA--GGATGTGC---AGT--TTATTTAACCCGACCCCACTTCTGAAACGTTGTTACTATTATCCACCACGCTGATCTGAATAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192396539 107 - 192460366 ACTTTTTCCATAGGAACTGTCATCCCTTGGTAA--GGATGTGC---AGT--TTATTTAACCCGACCCCACTTCTGAAACGTTGTTACTATTATCCACCACGCTGATCTGAATAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187317140 106 + 187378091 A-TTTTTCCATAGGAACTGTCATCCCTTGGTAA--GGATGTGC---AGT--GTATTTAACCCGACCCCACTTCTGAAACGTTGTTACTATTATCCACCACGCTGATCTGAATAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341839 105 + 91754291 --TTTGTCCATAGGAACTGTCATCCCTTGGTAA--GGATGTGC---AGT--TTATTTAACCCGACCCCACTTCTGGAACGTTGTTACTATTACCCACCACGCTAATCTGAATAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73822546 88 + 74750902 --------------------CATCCCTTGGTAA--CGATCCGCAGTAGT--TCATTTAACCAGACCCCACTTCTGAAACATTGTTGC-ATT-TCCACCATGCTGATCCGAATGC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2312491 104 - 31377067 GCATTTTCCA----------CACCATGTGCTTACTGGTTGCACAGTATTCCTTGTTTAACAAAACCTCACCTATTAAACACTGttgctattataaaccacgctgctctggacgt i canFam3.chr33 I 30 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32780079 573 + 98207768 I a score=1645965.000000 s hg38.chr3_KI270937v1_alt 45536 597 + 165607 ccaggggcatatgtatctgtgcacttctccaattatttctcaggat--------aaaca----cccgaaaa-ggaattcgtggctgaaaaggtaCTGATTTAGTGTTCATCGGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAACACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCAGGA----------------------------ATTAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGTTGtgagtgcctgctctgtgtggagaataaaggcgctatattac---aaactctgaaacccaaaagagccatag--gg--gggcttagaactatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgccccagg-acgcagtaggttaagcagcagggca s panTro4.chr3_GL389630_random 20719 597 - 103936 ccaggggcatatgtatctgtgcacttctttaattatttctcaggat--------aaaca----cccgaaaa-ggaattcgtggctgaaaaggtatTGATTTAGTGTTCATCGGTTGCTTCCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAGATGCGATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGTGGCCAGGAGGTGGAGGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCAGGA----------------------------ATTAGGATGGCTC--------------GAGAGATCAGAGACCAGGGAAGAGAGGACAGTGG--AAAAGGAGAGTTGTGAGTGCCTGCTCTGTGTGGAGAATAAAGGCGCTATATTAC---AAACTCTGAAACCCAAAAGAGCCATAG--GG--GGGCTTAGAAccatttcgaagatgagaaa-actgcagcttagagatgacaaggaacctgccccagg-acgcagtaggttaagcagcagggca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2833947 609 - 123690457 ccaggggcatatgtatctgtgcacttctttacttatttctcaggat--------aaaca----cccaaaaa-ggaattcgtggctgaaaaggtatTGATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTACGACCTGGTCTACAGCCCCCAGAGTGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACTGCAAGGGGTCCAGGA----------------------------ATTAGGATGGCTCCCTTTGTAAA--GAGagagatcagagaccagggaagaggggacagtgg--aaaaggAGAGTTGTGAGTGCCTGCTGTGTGTGGAGAATAAAGGCGCTATATTAC---AAACTCTGAAACCCAAAGGAGCCACAA--GG--GGCattagagccattttgaagatgagaaa-actgcggcttagagatgacaaggaagctgccctggg-atgcagcaggttaagcagcagggcg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83282 600 - 111706 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGAAAA-AGAATTCGTGGTTGAAAAGGTATTGATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTATAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGAGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCAGAA----------------------------ATTAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGTTGTGAGTGCCTGCTCTGTGTGGAGAA---------TATATTAC---AAACTCTGAAACCCAAAGGAGCCAcag--gg--ggtattgaaaccatttcgaagatgagaaa-actgcagcttaaagatgaccgggaacttgcccgggg-agccagtaggttaagcagcagggca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192396646 600 - 192460366 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGAAAA-AGAATTCGTGGTTGAAAAGGTATTGATTTAGTGTTCATCAGTTGCTTTCTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTATAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGAGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCAGAA----------------------------ATTAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGTTGTGAGTGCCTGCTCTGTGTGGAGAA---------TATATTAC---AAACTCTGAAACCCAAAGGAGCCACAG--GG--GGTATTGAAAccatttcgaagatgagaaa-actgcagcttaaagatgaccaggaacttgcccgggg-agccagtaggttaagcagcagggca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187317246 600 + 187378091 GCAGGGGCATATGTATCTGTGCATCTCTCTAATTACTTCTCAGGAG--------AAACA----CCTGAAAA-GGAATTCGTGGTTGAAAAGGTATTGATTTAGTGTTCATCAGTTGCTTTGTGTGTTAATCTATGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTGCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGTCCAGAA----------------------------ATTAGGATGGTTCCCTTTGTAAC--GAGAAAGATCGGAGACCTGGGAAGAGGGGACAGTGG--GAAGGGAGAGTTGTGAGTGCCTGCTCTGTGTGGAGAA---------TATATTAC---AAACTCTGAAACCCAAAGGAGCCACAG--GG--GGTACTGAAACCATTTCgaagatgagaaa-actgcagCTTAAAGATGACCAGGAACTTGCCCGGGG-AGCCAGTAGGTTAAGCAGCAGGGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91341944 596 + 91754291 GCAGGGGCATATGTATCTGTGCACCTCTC----TATTTCTCAGGAG--------AAACA----CCTGAAAA-GGAATTCGTGGTTGAAAAGGTATTGCTTTAGTGTTCATCAGTTGCTTTCTGTGTTAACCTGTGTCCTTCCCGACAGTGAACGTGAGCACGCTGAAGGCTTACTTCGAATGCAATGGCTACAAGGGCTATGACCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTAGGGGCTACTGTGACCATGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCATAGGG--CTTCGGCCAGGAGGTGGATGACAGTGCTGGGGAACCCAAGCTGGGCA-AGACACCGCAAGGGGCCCAGAA----------------------------ATTAGGATGGCTCCCTTTGTAAC--GAGAAAGATCGGAGACCAGGGAAGAGGGGACAGTGG--GAAGGGAGAGTTGTGAGTGCCTGCTCTGTGTGGAGAA---------TATATTAC---AAACTCTGAAACCCAAAGGAGCCACAG--GG--GGTACTGAAAccatttcgaagatgagaaa-actgcagcttaaagatgacaaggaacttgcccgggg-agccagtaggttaagcagcagggca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73822634 567 + 74750902 CCAGGGACATACGTATC-GTGCACTTCTCTAGTCGTTTCTCAGGAG--------------------------------------------------GATTTTGTGTCCATCGGTTGCTTTCTGTGTTCACCTGTGTTCTTCCTGACAGTGAACGTGAGCATGCTGAGGACTTACTTCAAATGCAGTGGCTACGAGGGCTACAACCTGGTTTACGGCCCCCAGAGCGGCTTCACCTGTGTGTCCCCGTGCAGTAGGGGCTACTGTGACCACGGAGGCCAGTGCCAGCACCTGCCCAGTGGGCCCCGCTGCAGGTGCGTAGGG--CCACGGCCAGGAGGCGGATG--AGTGCTGGGGAACTCAAGCTGGGCA-AGACCCTGCAA-AGGCCCAGGA----------------------------ATTAGGATGGCTCCCTTTGAGATTGGAGAGAAACCAGAGACCAGGGAAGAGGGGACAGTGGAAGAAAGGAGGGTTGTGAGTGCCTGCTCTGTGTGGAGAATAAGGGCGCTATATTAC------CTCGGAGGCCCAAAGGAGCCACagttgg--gtatttagaaccatttcgaagatgagaaa-atggcagctgagagat---aaggaaactgccccggc-acccagtcggttaaa-agcagggta i calJac3.chr17 C 0 C 0 s mm10.chr16 32780652 631 + 98207768 CTACGGATACAGGACTCTAGGCACTTGACCAGATGTTTCTCAGAAACATCTCATAAACACCTGCCTGAAAC-TTGACTACCTGATGGAAAGGAATGAATTTA-CCTCTGTGGTTTGCTTACTCCATGTATCCTTTTCCTGCCT-ACAGTGAACCTAAGTATGCTGGAGGAGTACTTCACATGTGATGGCTACAAAGGCTACCACCTGGTCTACAGCCCACAGGATGGTGTCACCTGTGTGTCCCCATGTAGTGAGGGCTACTGTCACAATGGAGGCCAATGCAAGCACCTGCCAGATGGGCCCCAATGCAGGTGGGTAGGGGCCTGGGGCAGGAAAGCAA-----AGCACTGGGGAACTCAGATTTGACG-AGACACCACAGTAGGCCCAGGAAGACAATGTCCTCTCCTAA-GACTTGACAGTGGGATGACTC-CCCAGTGGC----TGGAGGGTGAAAAGCAGAGAA-AGTGGGCAGTAG--GAGAAGGG---TGTGTGGCACTCCTCTGCATGGAGGAGAAAGACA-TGCATTGC------TTCTGAAAGTCAAGCTAGTCACAA-AAG--GTTACTTCAACCATTCCAGACTTGGGGAATACTGCATTGAAGAGA----GAGGAGGCTCCAGTAGGCACCCAGGAAGTAAAATACCAGGGTA i mm10.chr16 I 573 I 363 s canFam3.chr33 2312595 605 - 31377067 ccatgaacatacagatttgcatgcttttccaaggatttctcaggat--------aaatg----cctgaaaacagaattcccgattgaagaggtatagaTCCGGTGCT-ATTGATTGCTTTCCATGTTCATCTGTGTCCT----GACAGTGAACGTGAGCACGCTGAAGGCTTACTTCAAATGCAACAGCTACAAGGACTACCGCCTGGTCTACAGCCCCCAGAGCGGCTTCACCTGCGTGTCCCCGTGCAGTGAGGGCTATTGTAAGCACGGAGGCCAGTGTCAGCACCTGCCCCAAGGGCCCCGCTGCAGGTGAGTCGGG--GAGAGGGCAGGACGAG-----CAGAGCCGGAGACTCCAGGCCGGGCACAGATACCGCAAGGGGCGTAGAAATGCCACGGTACCTGGTGGTGTCTGGAAGTTAGGATGGTTCTCTGATGACT----CAGAGAGCAGGGATCAGAGAAAAAGGGACCATAG--AAAAGATG---TGTGAGCACTTACTCTGTGTGGATAA---AGATGCTGCATGACTTCTAACACTGACACTT-----AGCTTCTG--GGTAGGTAGTATGACCCTTTTAAAGAAGAGGTA-----------------GGTAATGAATCTGCCCAGGT-AGCCAGGAGGTTAAATAACAGAACA i canFam3.chr33 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I a score=53544.000000 s hg38.chr3_KI270937v1_alt 46133 17 + 165607 tggtttccaaagccaaa s panTro4.chr3_GL389630_random 21316 17 - 103936 tggtttccaaAGCCAAA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2834556 17 - 123690457 tggtttccaaAGCCAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83882 17 - 111706 tggtttccaaagccaaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192397246 17 - 192460366 tggtttccaaagccaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187317846 17 + 187378091 CGGTTTCCAAAgccaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91342540 17 + 91754291 tggtttccaaagccaaa i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73823201 17 + 74750902 tggtttccaaAGCCAAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2313200 17 - 31377067 TGGGTTCCAAAGGCAAA i canFam3.chr33 C 0 I 403 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I a score=61122.000000 s hg38.chr3_KI270937v1_alt 46150 39 + 165607 cattttttatatttttatgttttgagatggagtgtcatt s panTro4.chr3_GL389630_random 21333 39 - 103936 CAttttttatatttttatgttttgagatggagtgtcatt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2834573 39 - 123690457 CAttttttatatttttatgttttgagatggagtgtcatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83899 31 - 111706 c-------at-tttttattttttgagatggagtgtcatt i rheMac3.chrUn_JH291127 C 0 I 1 s macFas5.chr2 192397263 31 - 192460366 c-------at-tttTTATTTTTTGAGATGGAGTGTCATT i macFas5.chr2 C 0 M 425 s papAnu2.chr2 187317863 38 + 187378091 cattttttat-tttttattttttgagatggagtgtcatt i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 91342557 38 + 91754291 cattttttat-tttttattttttgagatggagtgtcatt i chlSab2.chr15 C 0 I 1 s calJac3.chr17 73823218 34 + 74750902 C-ttttttat-ttttta---tttgagactgagtatctct i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e canFam3.chr33 2313217 403 - 31377067 I a score=407571.000000 s hg38.chr3_KI270937v1_alt 46189 260 + 165607 -tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgggactacaggcacgcaccaccacgcccagctgatttttgcatttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggcgtgagccaccgcgcc s panTro4.chr3_GL389630_random 21372 260 - 103936 -tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgcaacgtccttctcccgcgttcaagcgattctcctgcctcagcctcccgagtagttgggactacaggcacgcaccaccacgcccagctgatttttgcatttttagtagagac-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggcgtgagccaccgcgcc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2834612 260 - 123690457 -tgtcgcccaggctggagtgcagtggtgcgttctcggctcactgccacgtccttctcccgagttcaagcgattctcttgcctcagcctcccaagtagttgggactacaggcatgcaccaccacgcccagctgatttttgcatttttagtagagat-ggggtttcgccatgttgg-tcaggctggtctcgaactcctgacctcaggtgatccgtccaccttggcctcccaaagtgctgagattacaggcgtgagccaccgcgcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 83931 249 - 111706 -cgtcgcccaggctggagtgcagtggcgtgatctcgactcactgcaacctccacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagctgatttttgtatttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgagattacaggcgtga----------- i rheMac3.chrUn_JH291127 I 1 C 0 s papAnu2.chr2 187317902 248 + 187378091 -cgtcgcccgggctggagtgcagtggtgcgttctcg-ctcactgcaacctccagctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagctgatttttgtatttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaactcctgacctcaggtgatccgcccacctcagcctcccaaagtgctgagatgacaggcgtga----------- i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 91342596 247 + 91754291 -cgtcgcccaggctggagtgcaatggtgcgttctcg-ctcactgcaacctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgtgactacaggcgcgcaccaccacacccagctgatttttgtatttttagtagaaac-aaggtttcgccatgttgg-ccaggctggtctcaaact-ctgacctcaggtgatccgcccacctcagccttccaaagtgctgagatttcaggcgtga----------- i chlSab2.chr15 I 1 C 0 s calJac3.chr17 73823252 263 + 74750902 cggttacccaggctggagtgcagtggtgcattctcagctcacagcaacctctgcctcccgggttcaagcgattcttctgcctccacctccccagtagctgagatgataggtgcacgccaccacacctggctaacttttgtatttttagtagagatgggggtttcaccatattggttcaggctggtcttgaactcccaacctcaggtgatccacccgccttggcctcccaaagtgctgggattacaggtgggaaccaccatgcc i calJac3.chr17 C 0 I 1 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e canFam3.chr33 2313217 403 - 31377067 I e macFas5.chr2 192397294 425 - 192460366 M a score=124458.000000 s hg38.chr3_KI270937v1_alt 46449 97 + 165607 agggcccaaagtcaaaccctcccacctgatctggctgctgcttccctgctgtctccttgTGGGAAAAGAACCTGCG--GTCCTGTGTCTA-GGCCAGTCC s panTro4.chr3_GL389630_random 21632 99 - 103936 gggGCCCAAAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTTCTTGTGGGAAAAGAACCTGTGCAGTCCTGTGTCTA-GGCCAGTCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2834872 97 - 123690457 aggGCCCAGAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGCCTCCTTGTGGGAAAAGAACCTGCA--GTCCTGTGTCTA-GGCCAGCCC i nomLeu3.chr11 C 0 M 186 s rheMac3.chrUn_JH291127 84180 96 - 111706 --ggcccaaagtcaaaccctcccacctgatctggctgctgcttccctgctgtctccttgTGGGGAAGGAACCTGCA--GTCCTGTGTCTAGGGCCAGCCC i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187318150 96 + 187378091 --ggcCCAAAGTCAAACCCTCCCACCTGATCTGGCTGCTGCTTCCCTGCTGTCTCCTTGTGGGGAAGGAACCTGCA--GTCCTGTGTCTAGGGCCAGCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91342843 96 + 91754291 --ggcccaaagtcaaaccctcccacctgatctggctgctgcttccctgctgtctccttgTGGGGAAGGAACCTGCA--GTCCTGTGTCTAGGGCCAGCCC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I e macFas5.chr2 192397294 425 - 192460366 M a score=103212.000000 s hg38.chr3_KI270937v1_alt 46546 138 + 165607 TGCCCCTCAGTCAAGCGAGGCGCCTTTGCCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTTAACAGCGCAGGAAGCCGCGGCCCCACGCAGACCTGGGCTCCGGGCCCTCCGCCAGCTGCAGTTCCAGATCC s panTro4.chr3_GL389630_random 21731 133 - 103936 TGCCCCTCAGTCAAGCGAGGCGCCTTTGCCCCTGCCCTCACCAGCAGTCCCCGGGGCTCCGCTGGTT-----CACAGGAAGCCGCGGCCCCACGCAGGCGTGGTCTCCGGGCCCTCGGCCAGCTGCAGTTCCAGATCC i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 84276 136 - 111706 TGCCCCTCAGTCACGGGAGGCGCCTTTGCCCCTGCCCTCACCAGCAGTCCC-GGGGTTCCGCTGGTGAACAGCGCAGGAAGCCGCGG-CGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCAGCTGCAGTTCCAGATCC i rheMac3.chrUn_JH291127 C 0 I 21 s papAnu2.chr2 187318246 136 + 187378091 TGCCCCGCAGTCACGGGAGGCGCCTCGGCCCCTGCCCTCACCAGCAGTCCC-GGGGTTCCGCTGGTGAACAGCGCAGGAAGCCGCGG-TGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCTGCTGCGGTTCCAGATCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91342939 135 + 91754291 TGCCCCTCAGTCACGGGCGGCGCCTTTGCCCCTGCCCTCACCGGCAGTCCC--GCGTCCCGCTGGTGAACAGCGCAGGAAGCCGCAG-CGCACGCAGGCCTGGTCTCCGCGCCCTCCGCCTGCTGCGGTTCCAGATCC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I e macFas5.chr2 192397294 425 - 192460366 M e nomLeu3.chr11 2834969 186 - 123690457 M a score=26314.000000 s hg38.chr3_KI270937v1_alt 46684 82 + 165607 CGCCGAAGGAGggggcgggcggagcgcgggtggggcggggcCCGGCTCTCCGGGTggg------cggggcggggcggggccgggctgg s panTro4.chr3_GL389630_random 21864 88 - 103936 CGCCGAAGGAGGGGGCGGGCGGAGCGCGGGTGGGGCGGGGCCCAGCTCTCCgggcggggcggggcggggcggggcggggccgggctgg i panTro4.chr3_GL389630_random C 0 C 0 s papAnu2.chr2 187318382 68 + 187378091 -GCCGAAGAAgggggtgggcggggcg-----ggggcggggcccagctctccgggcggg----------gaggggcggggccggg---- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343074 64 + 91754291 CGCCCAAGAACGGGATgggcggggcg-----gggccggggcccagctctccgggc---------------ggggcggggccggg---- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I e macFas5.chr2 192397294 425 - 192460366 M e rheMac3.chrUn_JH291127 84412 21 - 111706 I e nomLeu3.chr11 2834969 186 - 123690457 M a score=29659.000000 s hg38.chr3_KI270937v1_alt 46766 34 + 165607 ggcggggGTGTGACTGCGCATGCCCACCTGTGGC s panTro4.chr3_GL389630_random 21952 34 - 103936 ggcggggGTGTGACTGCGCGTGCCCACCTGTGGC i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192397724 34 - 192460366 GGCGGGGCTGTGACTGCGCATGCCCACTTGTGGC i macFas5.chr2 M 425 I 4 s papAnu2.chr2 187318450 33 + 187378091 -gcggggctgTGACTGCGCATGCCCACTTGTGGC i papAnu2.chr2 C 0 I 4 s chlSab2.chr15 91343138 33 + 91754291 -gcggggcTGTGACTGCGCATGCCCACTTGTGGC i chlSab2.chr15 C 0 I 4 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I e rheMac3.chrUn_JH291127 84412 21 - 111706 I e nomLeu3.chr11 2834969 186 - 123690457 M a score=22850.000000 s hg38.chr3_KI270937v1_alt 46800 16 + 165607 CGGCATCCCTGCCGCC s panTro4.chr3_GL389630_random 21986 16 - 103936 CGGCATCCCTGCTGCC i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 84433 16 - 111706 CGGCATCCCTGCTGCC i rheMac3.chrUn_JH291127 I 21 C 0 s macFas5.chr2 192397762 16 - 192460366 CGGCATCCCTGCTGCC i macFas5.chr2 I 4 C 0 s papAnu2.chr2 187318487 16 + 187378091 CGGCATCCCTGCTGCC i papAnu2.chr2 I 4 C 0 s chlSab2.chr15 91343175 16 + 91754291 CGGCATCCCTGCTGCC i chlSab2.chr15 I 4 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I e nomLeu3.chr11 2834969 186 - 123690457 M a score=572874.000000 s hg38.chr3_KI270937v1_alt 46816 332 + 165607 CAGGTGCAGCTGACTGCACGTGCAGCTGAATTCACACCAGGtttttgt-------ttttgttttttgagacggagtcttgctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaacctccacctcccaggttcaagcgattctgcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggctaa-ttttgtatttttagtagagat-ggggtttcaccgtgttggccagtctggtctcgaacccctgacctcaagtgatgcgcccgcctcagcctctcaatgtgctgggattacaggcgtgagcccccgcg-cc s panTro4.chr3_GL389630_random 22002 332 - 103936 CAGGTGCAGCTGACTGCACGTGCAGCTGAATTCACACCAGGtttttgt-------ttttgttttttgagacggagtcttgctctgtcccccaggctggagtgcagtgttgcaatctgggctcactgcaacctccacctcccaggttcaagcgattctgcctcagcctcctgagtagctgggattacaggtgcgcaccaccacgcctggctaa-ttttgtatttttagtagagat-ggggtttcaccatgttggccagtctggtctcgaacccctgacctcaagtgatccgcccgcctcagcctctcaatgtgctgggattacaggcgtgagcccccgcg-cc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835157 340 - 123690457 CAGGTGCAGCTGACTGCACATGCAGCTGAATTCACACCAGGtttttgtttttttgttttgttttttgagacggagtcttgctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaacctccacctcccaggttcaagcgattctgcctcagcctcctgagtagctgggactacaggtgcgcaccaccatgcctggctaa-ttttgtatttttagtagagatgggggtttcaccatgttggccagtctggtctcgaacccctgacctcaagtaatccacccacctcagcctctcaatgtgctgggattacaggctgagccccccgcg-cc i nomLeu3.chr11 M 186 C 0 s rheMac3.chrUn_JH291127 84449 331 - 111706 CAGGCACAGCTGACTGCACGCGCAGCTGAATTCACTCCACGtttttgt-------ttttg-tttttgagacggggtct--ctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattctgcctcagcctcccgagtagctgggactacaggtgcgcgccaccacgcctggctaatttttgtatttttagtagagat-ggggttttaccgtgttggccagtctggtcttgaactcctgatctcaagtgatccgcccgcctcagcctttcagagtgctgggattccaggcgcgagccaccaggccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192397778 331 - 192460366 CAGGCACAGCTGACTGCACGCGCAGCTGAATTCACTCCACGtttttgt-------ttttg-tttttgagacggggtct--ctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattctgcctcagcctcccgagtagctgggactacaggtgcgcgccaccacgcctggctaatttttgtatttttagtagagat-ggggttttaccgtgttggccagtctggtcttgaactcctgatctcaagtgatccgcccgcctcagcctttcagagtgctgggattccaggcgtgagccaccaggccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187318503 331 + 187378091 CAGGCACAGCTGACTGCACGCGCAGCTGAATTCACTccacgtttttgt-------ttttg-tttttgagacggggtctcgctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaagctccgcctcccgggttcaagcgattctgcctcagcctcccgagtagctgggactacaggtgcccgccaccacgcctggctagtttttgtatttttagtagagat-ggggttttaccgtgttggccagtctg--cttgaactcctgatctcaagtgatccgcccgcctcagcctttcagagtgctgggattccaggcgtgagccaccaggccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343191 333 + 91754291 CAGGCGCAGCTGACTGCACGCGCAGCTGAATTCACTCCACGtttttgt-------ttttg-tttttgagatggagtctcgctctgtcccccaggctggagtgcagtgttgcaatctcggctcactgcaagctccacctcccaggttcaagcgattctgcctcagcctcccgagtagctggcactacaggtgtgcgccaccacgcctggctcatttttgtatttttagtagagat-ggggctttaccgtgttggccagtctggtcttgaactcctgacctcaagtgatccgcccgcctcagcctctcaaagtgctgggattccaggcgtgagccaccaggccc i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e calJac3.chr17 73823515 1 + 74750902 I e canFam3.chr33 2313217 403 - 31377067 I a score=4683.000000 s hg38.chr3_KI270937v1_alt 47148 2 + 165607 gg s panTro4.chr3_GL389630_random 22334 2 - 103936 gg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835497 2 - 123690457 gg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84780 2 - 111706 gg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398109 2 - 192460366 gg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187318834 2 + 187378091 gg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343524 2 + 91754291 gg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73823516 2 + 74750902 ag i calJac3.chr17 I 1 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32781283 363 + 98207768 I e canFam3.chr33 2313217 403 - 31377067 I a score=45316.000000 s hg38.chr3_KI270937v1_alt 47150 21 + 165607 ccCAGGCCCATGTTTTTAAAG s panTro4.chr3_GL389630_random 22336 21 - 103936 ccCAGGCCCATGTTTTTAAAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835499 21 - 123690457 ccCAGGCCCAGGTTTCTAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84782 20 - 111706 ccCAGGCCCATGTTT-TAAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398111 20 - 192460366 ccCAGGCCCATGTTT-TAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187318836 20 + 187378091 cccagGCCCATGTTT-TAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343526 20 + 91754291 ccCAGGCCCATGTTT-TAAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73823518 20 + 74750902 ccTAGACCCACATTT-TAAAG i calJac3.chr17 C 0 C 0 s mm10.chr16 32781646 19 + 98207768 CCCAGACATG-GTTT-TTAAG i mm10.chr16 I 363 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e canFam3.chr33 2313217 403 - 31377067 I a score=330161.000000 s hg38.chr3_KI270937v1_alt 47171 151 + 165607 CCCACACCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG----TCTCTCCGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTTCTTCCCCAGCAGAAGAGGA----------------------GGGGCTGGGAGGCTGAGCTCCCGCC- s panTro4.chr3_GL389630_random 22357 151 - 103936 CCCACGCCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCACGGCCTCAGGGCTGACTCAG----TCTCTCCGGAGAGTGGGGCAAGCCCAGCCTCTCCTACAGAACCTCTTCTTCCCCAGCAGAAGAGGA----------------------GGGGCTGGGAGGCTGAGCTCCCGCC- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835520 151 - 123690457 CCCACACCTGCCTCCTTTGCCCAGTGGTCTCACTTCAGCGCAGCCTCAGGGCTGACTCAG----TCTCTCTGGAGAGTGGGGCGAGCCCAGCCTCTCCTACAGAACCTCTTCTTCCCCAGCAGAAGAGGA----------------------GGGGCTGGGAGGCTGAGCTCCCGCC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 84802 151 - 111706 CCCACAGCTGCCT-CTTGGCCCAGTGGCCTCACTTCAGAACGGCCTCAGGGCTGACTCACCCTTTCTCTCCGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---TCTTCCCCAGCGGAAGAGGC----------------------GGGGCTGGGAGGCTGAGCTCCCGCC- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398131 151 - 192460366 CCCACAGCTGCCT-CTTGGCCCAGTGGCCTCACTTCAGAACGGCCTCAGGGCTGACTCAGCCTTTCTCTCCGGAGAGTGGGGCAAGCCCAGCCTCTCCTAGAGAACA---TCTTCCCCAGCGGAAGAGGC----------------------GGGGCTGGGAGGCTGAGCTCCCGCC- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187318856 151 + 187378091 CCCACAGCTGCCT-CTTTGCCCAGTGGCCTCACTTCAGCACGGCCTCAGGGCTGACTCAGTCTTTCTCTCCGGAGAGTGGGGCGAGCCCAGCCTCTCCTAGAGAACA---TCTTCCCCAGCGGAAGAGGC----------------------ggggctgggaggctgagctcCCGCC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343546 174 + 91754291 CCCACAGCTGCCTCCTTTGCTCAGTGGCCTCACTTCAGCACGGCCTCAGGGCTGACTCAGCCTTTCTCTCCGGAGAGCGGGGCAAGCCCAGCCCCTCCCAGAGAACC---TCTTCCCCAGCGGAAGAGGCGGGGCTGGGAGGCGGAAGAGGTGGGGCTGGGAGGCTGAGCTCCCGCC- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73823538 153 + 74750902 CCCACACCTGCCTCCTTTGCCCAATGGTCT--CTTCAGCATGACCTCAGGGCTGACTCAGTCTCTCTCTCCAGAGAGTGGGGCGAGCCCAGCCTCTCCTAGAGAACCTCCTCTGCCCCAGCAGGAGAAGA----------------------GAGGCTGGGAGGCTGAGCACCCACC- i calJac3.chr17 C 0 C 0 s mm10.chr16 32781665 129 + 98207768 GTTATGCCTCCCTCCTTTGATTGGTGACCTCAATTCAAAATGGCCTTAGAGCTGGCTGGACCCTCCACCCAGCTGAT-------AGCCCTGCCTGTCTTGCATAACC-CCTGGTCCCCAGGAGTGGAAGG----------------------AA------------------TCGTC- i mm10.chr16 C 0 C 0 s canFam3.chr33 2313620 101 - 31377067 CCCCTGCCAGTCTCCCCTACCCAGTAGGC--ACTTCGGTTCTGCCTC--------------CTTCCCCAGAGGAGAGT--------CCCAGCCTGTGGAGGGAAACC---TCCT--------------------------------------GGGGC------------CTCCCCACT i canFam3.chr33 I 403 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I a score=826142.000000 s hg38.chr3_KI270937v1_alt 47322 355 + 165607 TCTGA-CCGCCTGTCTGTCTCTCTTGGTCACCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCTGCGCTTCTGGGGTTGCT------------CCGGGGCCAGGTTCTCCTATTTCCTGAACTC----AGC----TGAGGCCTTGCCTTGAAGGGGCAGCTGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CCGCACATTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT s panTro4.chr3_GL389630_random 22508 355 - 103936 TCTGA-CCACCTGTCTGTCTCTCTTGGTCACCAGCTGTGTGTCCTTCTCCATCTACATGGCCTGGGGCGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTCGGCATCTTCTTTGGGGCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGACGTTCGTGGTCCTGCGCTTCTGGGGTTGCT------------CCGGGGCCAGGTTCTCCTATTTCCTGAACTC----AGC----TGAGGCCTTGCCTTGAAGGGGCAGCCGTGGCCTAGGCTACCTCAAGACTCACCTCATCCTTA-CCGCACATTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT i panTro4.chr3_GL389630_random C 0 C 0 s rheMac3.chrUn_JH291127 84953 353 - 111706 TCTGA-CACGCTGTC--TCTCTCTCGGTCCCCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCTGCGCTTCTGGAATTGCT------------CCAGGACCAGCTTCTCCTATCTCCTGCACTC----AGC----TGAGGCCTCGCCTTGAAGGGACAGCTGTGGTCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398282 353 - 192460366 TCTGA-CACGCTGTC--TCTCTCTCGGTCCCCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCTGCGCTTCTGGAATTGCT------------CCAGGACCAGCTTCTCCTATCTCCTGCACTC----AGC----TGAGGCCTCGCCTTGAAGGGACAGCTGTGGTCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187319007 353 + 187378091 TCTGA-CACGCTGTC--TCTCTCTCGGTCGCCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGTGTTCTTCGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGCCCTGCGCTTCTGGAATTGCT------------CCAGGACCAGCTTCTCCTATCCCCTGCACTC----AGC----TGAGGCCTCGCCTTGAAGGGACAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91343720 353 + 91754291 TCTGA-CACGCTGTC--TCTCTCTCGGTCCCCAGCTGTGTGTCCTTCTCCATCTACACGGCCTGGGGAGAGCACTGTGAGCACCTGAGCATGAAACTCGACGCGTTCTTTGGGATCTTCTTTGGGTCCCTGGGCGGCCTCTTGCTGCTGGGGGTCGGGGTGTTCGTGGTCCTGCGCTTCTGGAATTGCT------------CCAGGACCAGCTTCTCCTATCTCCTGCGCTC----AGC----TGAGGCCTCGCCTTGAAGGGACAGCTGTGGCCTAGGCTACCTCAAGACCCACCCCATCCTCA-CCGCACACTTAA----GGCGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGGCTGTCAGGATTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73823691 357 + 74750902 TCTGACCACGCTGTC--TCTCTCTCGGTCCCCAGCTGCGTGTCCTTCTCCATCTACACAGCCTGGGGTGAGCGCTGTGAGCACCTGAGCATGAAACTCAAAGCGTTCTTCGGGATCTTCTTTGGGGCCCTCAGTGCCCTCTTGCTGCTGGGGTTCGGGATGTTTGTGGTCCTGCACTTCTGGGGTTGCT------------CCAGGACCAGATTCTCCTACCCTCTGGACTCGGAAAGC----TGAGGCCTCACCTTGAAGGGGCAGCTGTGA-CTAGGATACCTTAAGACCCACCCCGTCCTCA-CCACACACCTAA----GATGCCATTGCTTTTGGGAGACTGGAAAAGG----------GAAGGTGACTGAAGACTACTGGGATTCT i calJac3.chr17 C 0 C 0 s mm10.chr16 32781794 339 + 98207768 ACTGACCACAATG-C--ATTCTCTCTGTCTTCAGCTGCGCATCCTTCACCATCTACTCATCCTCGGGCGAACACTGTGAGCACCTAAGTGTGAAACTTGGGGCATTCTACGGGATCCTCTTCGGAACCCTGGGCGCCCTCTTGCTACTGGGGATCTTAGCATTTATGATCTTTCACTTCTGCGGCTGCT------------CCAAGAACAAGTTCTCCTACCCTTTGGACTC----AGAATTGTAAGGCCCTGTCCCAGATGGGCAGCTGC-ACCTAGG--ACCTCGGGACCCATCCC----------------TCAG----TCTGCCCCTGC-TCTGTGGGACTGGAAAGGGCCTGCGGCATGAAGATGATTTGAGACTCT--------- i mm10.chr16 C 0 C 0 s canFam3.chr33 2313721 371 - 31377067 GCTGA---CCTTGTCC-CTTCCCTCTGTCCACAGCTGTGTGCCTTTCTCCATCTACACGCCCTGGGGCGAGCGCTGTGAGCATCTGGGCATGAAGCTCAGTGCCTTCTTTGGAATCCTCTTTGGAGCCCTGTTCATCCTCCTGCTGCTGGGGGCTGTGGGGTTTGCAGTCCTGTACTTCTGGCGCTTCTGGCGCTACTCCCCCGGGAACCACTACTCCCACCGCCTGGACTCAGAAGGC----TGAGGCCTGGCCCCAAAGGGGCAGCTGTGACCTAGGATACCTCAGGACCCACCCCAGCCTCACCCACACACTTGCAGGTGGCACCGATCCTTTGAGGAGACTCAGAAAAATGTGCTT---AAAGGTGACT---------CAGGATTCT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e nomLeu3.chr11 2835671 0 - 123690457 C a score=350939.000000 s hg38.chr3_KI270937v1_alt 47677 166 + 165607 TCAAGGAGAATGAATAC-TGGGAATCAAGACAAGACTATACCTTATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATGC--ATGGATGGGTCCTCACGCAGACACACCC-ACAG---AAGGACACTAGCCTGTGCACG---------CGCGCGTGcacac----------acacacaca s panTro4.chr3_GL389630_random 22863 166 - 103936 TCAAGGAGAATGAATAC-TGGGAATCAAGACAAGACTATACCTTATCCATAGGCGCAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATAC--ATGGATGGGTCCTCACGCAGACACACCC-ACAG---AAGGACACTAGCCTGTGCACG---------TGCGCGTGCACAC----------ACACACACA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835671 156 - 123690457 TCAAGGAGAATGAATAC-TGGGAATCAAGACAAGAC----------CCACAGGCACAGGTGC--ACAGGGGGAGGCCATAAAGATCAAACATGC--ATGGATGGGTCCTCACGCAGACACACCC-ACAG---AAGGACACTAGCCTGTGCACG---------CGTGCGTGCGTAC----------ACACACACA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85306 163 - 111706 ACAAGGGGAGTGAATAC-TGGGACTCAAGACAAGACTATGCCTTATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCC-ACAG---AAGGACACTGGCCTGTGcacg---------catgcgcgcacat--------acacacacaca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398635 169 - 192460366 ACAAGGGGAGTGAATAC-TGGGACTCAAGACAAGACTATGCCTTATCCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCC-ACAG---AAGGACACTGGCCTGTGCACG---------CGTGCGCGcacat--acacacacacacacaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187319360 169 + 187378091 ACAAGGGGAGTGAATAC-TGGGACTCAAGACAAGACTATACCTTATTCATAGGCTCAGGTGC--ACAGGGGGAGGCCATAAAGA-CAAACAAGC--GTGGAGGGGTCCTCACGCAGACGGCCCC-ACAG---AAGGACACTGGCCtgtgcacg---------cgtgcacacacac------atacacacacaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91344073 171 + 91754291 ACAAGGGGAGTGAATAC-TGGGACTCAAGACAAGACTATACCTTATCCATAGGTTCAGGTGC--ACAGGGGGAGGCCATAATG-----ACAAGC--GTGGAGGGGTCCTCACGCAGACACCCCC-ACAG---AAGGACACTGGCCTGTGCACG---------CGTGCGTGcacatacacacacacacacacaca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73824048 168 + 74750902 TCAAGGAGAATGAATAC-CGGGAATCAAGACAAGACTACGCCTTGTGGGTAGGCGCAGGGAC--ACATGGGGAGGCCATAAGGATCC-AGTGGC--ATGGATGGGTCCTCACACAGACACACCC-ACAGCCACAGGACACTGGCCTGTGcacg---------cacgcacacatgc----------acacataca i calJac3.chr17 C 0 I 116 s mm10.chr16 32782133 162 + 98207768 TCAA---GAGTGAAT------------AAACCAGACTCTACCTGTTTAGTAGACT-GGGGGT--ACAGGAAAAGGCCATGGTGGCCAAATATACAGATGGATGGGTTCCTACACAGATATATCAGGAAG---GAGGATATT-GCTTATATATGAATGCAGACTGTGTGTGCATAC----------ACACACACA i mm10.chr16 C 0 C 0 s canFam3.chr33 2314092 133 - 31377067 TCAAGGA-----AATACATAATAATAAAGACAAGACCACACCTTCTCAGTCAATACAGAGACAGACAGGAAGGAGCCATAAAG---------AC--CCGGATGAATTCTCTCACAGATGTACCC-AC-----AAGGATACCGATCCACAAACA---------CA------------------------------ i canFam3.chr33 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I a score=907781.000000 s hg38.chr3_KI270937v1_alt 47843 372 + 165607 cacacacGAGTTCAT-AATGTGGTGATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACACAA-AACTCTCTGGTTTACTTCAAATT-AACTCTATTTAAATAAAGTCTCTCTGAC-TTTTTGTGTCTTCAAAACCAGGAATTCCATTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGACACAGAC--TTCTCCCAACCATCAGAGGGCACAGAGTGTGGAGGTTAAGTGCTGGGCA-GCAGTGGAGCATTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-C---GGTTACCCATGCTGGAAACCCTCAGTTGCTCCACCCCAA------CCTTGCTTCATGCTCCACATCACCTTCTTCTTCCCCCACCC---------CAGCAC--AGGCCAAAGCTT s panTro4.chr3_GL389630_random 23029 369 - 103936 CACAAAAGAGTTCAT-AATGTGGTGATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACACAA-AACTCTCTGGTTTACTTCAAATC-AACTCTATTTAAATAAAG----TCTGAC-TTTTTGTGTCTTCAAAACCAGGAATTCCATTCCTGATTTTCTTCTCGTGGCCGAAGGGCTGGACACAGGC--TTCTCCCAACCATCAGAGGGCACAGCGTGTGGAGGTTAAGTGCTGGGCAGGCAGTGGAGCATTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-C---GGTTACCCATGCTGGAAACCCTCAGTTGCTCCACCCCAA------CCTTGCTTCATGCTCCACATCACCTTCTTCTTCCCCCACCC---------CAGCAC--AGGCCAAAGCTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2835827 367 - 123690457 CACAAAAGAGTCCAT-AATGCGGTGATGGCCCTAAGTTAAG---CAAAATGCTTCTGCACACAA-AACTCTCTGGTTTACTTCAAATTAAACTCTATT----TAAAGTCTCTCTGAC-TTTTTGTGTCTTCAAAACCAGGAATTCCATTCCTGATTTTCTTCTGGTGGCTGAAGGGCTGGGCACAGGC--TTCTCCCAACCATCAGAGGGCACCGAGTGTGGAGGTTAAGTGCTGGGCAGGCGGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-T---GGTCACCCATGCTGGAAGCCCTCAGTTGCTCCACCCCAA------CCTTGCTTCATAATCCACATCAC---CTTCTTCCCCTACCC---------CAGTGC--AGGCCATAGCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85469 371 - 111706 cacacCAGAGTTCAT-AATGCAGTGATGGCCCTAAGTTAAG---CAAAATATTTCTGCACACAA-AACTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAAC-TTTTTGTGTCTTCAAAACCAGAGATTCTATTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGGC--TTCTCCCAACCATCCGAGGGCACAGTGTGTGGAGGTTAAGTGTTGGGCAGGCGGTGGAGCAGT-GGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-C---GGTCACCCATGCTGGAAATCCTCAGTTGCTCCACCCTAA------CCTTGCTTCAGGCTCCACATCATCTTCTTCTTCCCCCACCC---------CAGCAC--AGGCCAAAGCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192398804 371 - 192460366 cacacCAGAGTTCAT-AATGCAGTGATGGCCCTAAGTTAAG---CAAAATATTTCTGCACACAA-AACTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAAC-TTTTTGTGTCTTCAAAACCAGAGATTCTATTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGGC--TTCTCCCAACCATCCGAGGGCACAGTGTGTGGAGGTTAAGTGTTGGGCAGGCGGTGGAGCAGT-GGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-C---GGTCACCCATGCTGGAAATCCTCAGTTGCTCCACCCTAA------CCTTGCTTCAGGCTCCACATCATCTTCTTCTTCCCCCACCC---------CAGCAC--AGGCCAAAGCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187319529 372 + 187378091 cacaccaaagttCAT-AATGCAGTGATGGCCCTAAGTTAAG---CAAAATATTTCTGCACACAA-AACTCTCTGGTTTACTTCGAATTAAAGTCTATTAAA-TAAAG-CTGTCTAAC-TTTTTGTGTCTTCAAAACCAGGGATTCCATTCCTGATTTTCTTCTGGTGGCCGAAGGGCTGGGCACAGGC--TTCTCCAAACCGTCAGAGGGCACAGTGTGTGGAGGTTAAGTGTTGGACAGGCAGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-A---GGTCACCCATGCTGGAAATCCTCAGTTGCTCCACCCTAA------CCTTGCTTCAGGCTCCACATCATCttcttcttcccccaccc---------cagcac--aGGCCAAAGCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91344244 369 + 91754291 cacacTAGAGTTCAT-AATGCAGTGATGGCCCTAAGTTAAG---CAAAATAATTCTGCACACAA-AACTCTCTGGTTTACTTCGAATTAAAGTCTATTTAA-TAAAG-CTGTCTAAC-TTTTTGTGTCTTCAAAACCAGGGATTCCATTCCTGATTTTCTTCTGGTGGCCAAAGGACTGGGCACAGGC--TTCTCCCAACCGTCCGAGGACACAGTGTGTGGAGGTTAAGTGTTGGGCAGGCAGTGGAGCAGTAGGGGCAGCTGG----ATCCAGTCCTA-ATCAGCC-C---GGTCACCCATGCTGGAAATCCTCAGTTGCTCCACCCTAA------CCTTGCTTCAGGCTCCACATCA---TCTTCTTCCCCCACCC---------CAGCAC--AGGCCAAAGCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73824332 369 + 74750902 cacGCCAGATTTCAT-CATGCAGGGATGGCTCTAAGTTAAC---CAGAATGCTTCCGCACATAA-AATTCTCTGGTTTACTTCTAATTAAAGTCTATTTAAATGAAGTCCCTCTGTCTTTTTTTTGTGTTCAGAAGCAGGGATTCTATTCCTGATTTTCTTCTGGTGGCCAAAGGGCTGGGCACAGGC--TTCTCCCAA----CAGAGGGTGCAGGGTGTGGAGGTGGTGTGTTGGGCAGGTGGTAGAGTAGTAGGGGCAGCTGG-----TCCAGCCCTG-GTCAGCC-CTT-GGTTAGCCATGTTGGAAATCCTCCATTGCTC--CCCCAA------CCTTGCTTCATGCTCCACATCATCTGCTTCTTCCCCCA-CC---------CAACAC--AGGCCAAAGTTT i calJac3.chr17 I 116 C 0 s mm10.chr16 32782295 366 + 98207768 CACACCAGAGTTAATGGATGTGAC--TGGCTTTACATTTAC---CAAGATGTTTTTACATATAA-----CACAGGCTTACTTCTCATTAAAATCTATTTAAATAAAG--TCTCTATC-TTTTTATGTCTTCA-AACTATGGATTCCATACCAGG-TTTCTTCTGGTGGCTGTAGTGTTAGGCACAGCACGTTCTTCCATTCCTCATA-AACATAGT-TGTGACAGTTGCATATTAGGGAGGGTGGGGGGTGGAAAATTCAGATGGTGGAGCCCAGCCCTACGACAGCT-CCCGGCTGCCCCATGCTGCTG--CATCGGTGGCCACAACGCTG------GCTTGGTCCTTGCTTC-------CTCCTTTCTCACCCAGCC---------CTGCACCTCAGCCAGTGCTT i mm10.chr16 C 0 I 928 s canFam3.chr33 2314225 320 - 31377067 CACATCAGAGTTACT-AATGGGCTGATGGCTCCAAGTTAAAAGCCAAAATTCATCTGTATAAAAAAACCCTCCAGTTTCCTTCTAGTTGAAGTCTATTTAAGTAAAATCCTTCTGAC---TTTGTGTTTCCAAAGCTGTGAATTCCACTGGTGATTTTCCTTGTGTGGCTGACAGGCTAGGTACAGGG-----------------------------------------------------------AGCGGAGGGGAGAGGTGG---------GTTGGA-ACCAGCCAC---GGTC-----TGTTGGGAAGCTT--GTTGCTCCAGCCCACCCGGGTCCTTGCTTCCGCCTCCACGTCAC---CTTCTTCCCCTTCCCAGGGGGAAGAAATGC--AAGCCAAAGCCT i canFam3.chr33 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I a score=1802320.000000 s hg38.chr3_KI270937v1_alt 48215 678 + 165607 TG-CCCGCTAAGGAGGAGAGCGAAAGAGTTACCCCAAGATGGAGTGCCCCAGAC--TCTCTCCCAGGACCCCTCCCTGCCTGCCTGTCCATCAGTTTCACAAAAGTCGTAAAAGGATCAATGCACAGTGTGTTTACCTGTCTGGTGGCTGTCCCCACCGCCTGCGTTTCATGGAAGAGCGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGGCCCGACCCCTCATATACCC-TCTCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGGTTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTG-CCCCAGCAACCTGATCAGCTTCCACAGAATCCTCTC----AGCAGGCGGGACTTTTACACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaatccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgtag-tcatggggtcagaaaggaggtcacatggtgcaaagcaggtgttcaagctcattcttgcgggtgggTAAGTGCTGTTGAAGGAAGCTC s panTro4.chr3_GL389630_random 23398 680 - 103936 CG-CCCGCTAAGGAGGAGAGCGAAAGAGTTACCCCAAGATGGAGTGCCCCAGAC--CCTCTCCCAGGACCCCTCCCTGCCTGCCTGTCCATCAATTTCACAAAAGTCGTAAAAGGATCAATGCACAGTGTGTTTTCCTGTCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTCATATACCCTTCTCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGGTTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACAGAATCCTCTC----AGCAGGTGGGACTTTTACACCTATCTGGTGTAATAACTCCAAC-ACAATTGGTccacaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaatccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatggtgcaaagcaggtgttcaagctcattcttgcgggtgggTAAGTGCTGTTGAAGGAAGCTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2836194 679 - 123690457 CG-CCCGCTAAGGACGAAAGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGAC--TCTCTCCCAGGACCCCTCCCTGCCTGCCTGTCCATCAATTTCACAAAAGTCGTAAAAGGATCAATGTAGAGTGTGTTTTCCTGTCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCATTTCCAGGAACCAGCTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGAGCCCTAATATACCT-TCTCTGTCCTTTCCCGGACCCCAGATGGAGTCCTCTGAGGTTCTCCAT--------CCCACAGCCCTTCACCTCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATCCTCTC----AGGAGGCGGGACTTTTACACATATCTGGTGTAATAACTCCAAC-GCAATTGGTccacaattcctgtgtctagaaaatttcagttcc----aactttatgcagaaactaggtagctgcctcttagttctaaaccccaaatccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaggtcacatggtgcaaagcaggtgttcaagctcattcttgtgggtgggTAAGTGCTGTTGAAGGAAGCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 85840 675 - 111706 C--CCCTCTAAGGAGGAGGGCGAAAGAGATACCCCAAGATGGAGTGACCCAGAC--TCTCTCCCAGGACCCCTCCCCACCTGCCTGTCCATCAATTTCAA-AAAGTCATAAAAGGATCAATGTACAGTGTGTTTTCCTGTCTGGTGGCTGTCCCCACTGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTA--ATACCT-TCTCTGTCCTTTCCTGGACCCCAGATGGAGTCTTCTGAGGTTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATCCTCTC----AGCAGGCAGGACTTTTACACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTccccaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaatccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatggtgcaaagcaggtgttcaagctcactcttgcgggtgggTAAGTGCTGTTGAAGGAAGCTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192399175 675 - 192460366 C--CCCTCTAAGGAGGAGGGCGAAAGAGATACCCCAAGATGGAGTGACCCAGAC--TCTCTCCCAGGACCCCTCCCCACCTGCCTGTCCATCAATTTCAA-AAAGTCATAAAAGGATCAATGTACAGTGTGTTTTCCTGTCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTA--ATACCT-TCTCTGTCCTTTCCTGGACCCCAGATGGAGTCTTCTGAGGTTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCGGCAACCTGATCAGCTTCCACATAATCCTCTC----AGCAGGCAGGACTTTTACACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTccccaattcctgtgtctagaaaatctcaattcc----aactttatgcagaaactaggtagctgcctcttagttctaaatcccaaatccctgaagagagaatctgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatggtgcaaagcaggtgttcaagctcactcttgcgggtgggTAAGTGCTGTTGAAGGAAGCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187319901 681 + 187378091 C--CCCTCTAAGGAGGAGGGCAAAAGAGATACCCCAAGATGGAGTGCCCCAGAC--TCTCTCCCAGGACCCCTCCCCACCTGCCTGTCCATCAATTTCAC-AAAGTCATAAAAGGATCAATGTACAGTGTGTTTTCCTCTCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTAAACCATTTCAGCTCCCTTTCCAGGAGCCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCGATCCCTAATATACCT-TCTCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGGTTCTCCAT--------CCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATCCTCTG----AGCAGGCAGGACTTTTACACCTATCTGGTGTAACAACTCCAAC-ACCATTGGTCCCCAATTCCTGTGTCTAGAAAATCTCAATTCTGCAAACCTTTATGCAGAAACTAGGTGGCTGCCTCTTAGTTCTAAATCCCAAATCCCTGAAAAGAGAATCTGACTGGTCCAATTTACATCAGTTGTTTATGCCTGGTCCAATAAAATGCAG-TCATGGGGTCAGAAAGGAAGTCACATGGTGCAAAGCAGGTGTTCAAGCTCGCTCTTGCGGGTGGGTAAATGCTGTTGAAGGAAGCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91344613 689 + 91754291 C--CCCTCTGAGGAGGAGGGCGAAAGAGATACCCCAAGATGGAGTGCCCCAGAC--TCTCTCCCAGGACCCCTCCCCACCTGCCTGTCCATCAATTTCAC-AAAGTCATAGAAGGGTCAGTGTACGGTGCGTTTTCCTGTCTGGTGGCTGTCCCCACCGCCTGTGTTTCATGGAAGAGGGATTACACCATTTCAGCTCCCTTTCCAGGAACCAACTCAAGAAACATGCCA-CCACCCCACCCTTAGATCTGGAGGACCCAATCCCTAATATACCT-TCTCTGTCCTTTCCCGGACCCCAGATGGAGTCTTCTGAGGTTCTCCATCCCACAGCCCCACAGCCCTTCAGCCCTACCCTGCCTCCACTTGTCCCCAGCAACCTGATCAGCTTCCACATAATCCTCTC----AGCAGGCAGGACTTTTACACCTATCTGCTGTAACAACTCCAAC-ACCATTGGTCCCCAATTCCTGTGTCTAGAAAATCTCAATTCTGCAAAACTTTATgcagaaactaggtggctgcctcttagttctaaatcccaaatccctgaagagagaaactgactggtccaatttacatcagttgtttatgcctggtccaataaaatgcag-tcatggggtcagaaaggaagtcacatggtgcaaagcaggtgttcaagctcactcttgcgggtgggTAAACGCTGTTGAAGGAAGCTC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73824701 659 + 74750902 CA-CCCTCTAAGGAGG------ACAGAGATACCCCAAGATGGAGTGCCCCAGACTGTCTCTCCCAGGACCCCTCCCCGCCTGCTTGTCTATCAATTTCAC-AAAGTTGTAAAAGGATAAATGCA------GTTTTCCTGTCTGGTGGCTGTCCCCAC-GCCTGTCTTTCATGGAAGAGGGATTAAACCATTTTGGCTCCCTTTCCAGGAACCAACTCAAGAAACGTGCCA-CCCACCCACCCTTAGATCTGGAGGACCTGATCCCTAATATGCCT-TCTCCGTCCTTTCCGGGACCCCAGATGGAGTGTTCTGAGGTTCTCCAT--------TCCACAGCCCCTCAGCCCTACCCTGCCTCTACTAGTCCCCAGCAACCTGATCAGCTCCCGCATGATCCTCTC----AGCAGGCAGGACTTCTACACCTATCTGGTGTAACAACTCCAAC-ACAATTGGTCCACACTTCCTGC------AAAACCTCA-TTCC----AACTTCATGCAGAAACTAGGTAGCTGCCTCTTAGTTCTAAATCCCAAATCCCTGAAGACAGAATCTGATTGGTCCCATTTACATCAGTTGTTTATGCCTGGTCCAATAAAATGCAA-TCATGGGGTGAGAAAGGAGGTCACGTGGTGCAAAGTCAGTGTTCAAGCTTACTCTTGTGGGTGGGTAAGTGGTG-TGAAGGAAGCAC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2314545 634 - 31377067 -GGCCTTCTGAGGAGGACAGT---AGAGACACCCCCACATGGAGTAGCCCAGAC----TCACCCGGGCACCCTCTA-------------------------ACAGTTCCGAGAGGGTAAATACACAGTGCCTTTACCTATCTGCT-CTTGCTCCCAC----TGTGTTCCCTGGAGGAGGGCTTACAC--------CTCCCTTTCCAAGAACCAATTTGAGAAGCGTGCCACCCACCCCCTCCTTAGACCTGGAGCACACAAT-CCTAATATACTC-TCTCTGTCCTTTCCTGAGCCCCA-CTGGAGCCTTCTGAGTCTCTTCAC--------CCCATGATCCCTTGGTCCCTCTCTGCCC------ATTCCCAGCCACATGATCGGTTTCCACCTCATCTTCTCTCCTAGCAGAAAGAACGTC-ACACCTATCTGGTGTAACTAGTCCAACAAAAACTGGTccacagctcctaggtctagaatacctcaattcc----acctctatggagaaactagagagctgcctcttgctcctaaatcccaactccctgaggggagaatatgattagtccagcttatgtcaattgtctatcactggtccaaataagtgtggaccatagggtaggaaaggaggtcacatgacatgatcctggtgctcaggctcactcttgtgggtgagcaagtggtGCTGGAGGAAGTTC i canFam3.chr33 C 0 I 13 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I a score=686854.000000 s hg38.chr3_KI270937v1_alt 48893 300 + 165607 CCAAAGGAAT---ATCTTTggttgggcacggtggctcacgcctgtaatcccaacattttgggaggccaaggcgggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcatggtggcacacgcctataatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc---aaa s panTro4.chr3_GL389630_random 24078 300 - 103936 CCAAAGGAAT---ATCTTTggttgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaggcgggcagatcacttgaggccaggagtttgagaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcgctgggcatggtggcagacgcctataatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagattgtgccactgcactccagcctgggcaacagagcaagactctgtctc---taa i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2836873 300 - 123690457 CCAAAGGAAT---ATCTTTggctgggcaccgcggctcatgcctgtaatcccaacactttgggaggtcgaggcgggtggatcacttgaggccaggagtttgaaaccagcctggccaacatagtgaaaccctgtctctact-aaaatacaaaaattcactgggcatggtggcacacgcctgtaatcccagctactcaggaggctgaggcaggagaatctgttgaacccaggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggtgacagagcaagactctgtctc---aaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86515 301 - 111706 CCAAAGGAAT---ATCTTTggttgggcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaatgctgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagactctcttgaacccaggaggcagaggttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagcaagactctgtctcaaa--- i rheMac3.chrUn_JH291127 C 0 I 47 s macFas5.chr2 192399850 298 - 192460366 CCAAAGGAAT---ATCTTTggttgggcacagtggcttacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaatgctgtctctactaaaaatacaaaaattagctgggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaagactctgtctc------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187320582 298 + 187378091 CCAAAGGAAT---ATctttggttgggcacagtggctcacgcctgtaatcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggccgacatggtgaaacgcggtctctactaaaaatacaaaaattagctgggcgtgggggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtagaggttgcagtgagctgagatcatgtcactgcactccagcctgggtgacagagcaagactctgtctc------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345302 296 + 91754291 CCAAAGGAAT---ATCTTTggttgggcacagtggctcacgcctgtagtcccaacactttgggaggctgaggcgggcggatcacttgaggccaagagtttgagaccagcttggctgacatggtgaaacgctgtctctactaaaaatacaaaaattagctgggcgtgggggcacgtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttgcagtgagctgagatcatgccactgcactccagcctgggtgacagagcaaga--ctgtctc------ i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73825360 300 + 74750902 CCAAAGAAATATGATCTTTGATTgggtgcggtggctcacgcctgtaattccaacactttggaaggccaaggcaggcggaccacttgaggccaggagtttgagaccagcctggccaacatggtgaaaccctgtctctact-aaaatacaaaaattagccaggcatggtggtgcacacctgtaatcccagctactcaggaggcagaggcaggaggatctcttgaatctgggaggtagaggttgcagtgagctaagatcacgccactgcactccagcctgggcggcagagcaagcctctctctc------ i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I a score=-2456.000000 s hg38.chr3_KI270937v1_alt 49193 18 + 165607 aaaaaaaaaaaaaaaaaa s panTro4.chr3_GL389630_random 24378 18 - 103936 aaaaaaaaaaaaaaaaaa i panTro4.chr3_GL389630_random C 0 I 5 s nomLeu3.chr11 2837173 12 - 123690457 aaaaaaaTtata------ i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192400148 3 - 192460366 ----aaa----------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187320880 3 + 187378091 ----aaa----------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345598 3 + 91754291 ----aaa----------- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73825660 0 + 74750902 C e canFam3.chr33 2315179 13 - 31377067 I e rheMac3.chrUn_JH291127 86816 47 - 111706 I a score=7922.000000 s hg38.chr3_KI270937v1_alt 49211 16 + 165607 --tatatatatatatata s nomLeu3.chr11 2837185 16 - 123690457 --tatatatatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192400151 14 - 192460366 ----tatgtatgtgtata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187320883 14 + 187378091 ----tatatatatataca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345601 14 + 91754291 ----tatatatatataca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73825660 16 + 74750902 TCTCTCTTTATATGTA-- i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I e rheMac3.chrUn_JH291127 86816 47 - 111706 I e panTro4.chr3_GL389630_random 24396 5 - 103936 I a score=-701.000000 s hg38.chr3_KI270937v1_alt 49227 12 + 165607 tatatataaaga s nomLeu3.chr11 2837201 12 - 123690457 tatatatataAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192400165 10 - 192460366 tatatataaa-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187320897 10 + 187378091 cacatatata-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345615 1 + 91754291 c----------- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73825676 0 + 74750902 C e canFam3.chr33 2315179 13 - 31377067 I e rheMac3.chrUn_JH291127 86816 47 - 111706 I e panTro4.chr3_GL389630_random 24396 5 - 103936 I a score=0.000000 s hg38.chr3_KI270937v1_alt 49239 26 + 165607 atatatatatatatatatatatatat e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73825676 0 + 74750902 C e canFam3.chr33 2315179 13 - 31377067 I e chlSab2.chr15 91345616 0 + 91754291 C e papAnu2.chr2 187320907 0 + 187378091 C e macFas5.chr2 192400175 0 - 192460366 C e rheMac3.chrUn_JH291127 86816 47 - 111706 I e nomLeu3.chr11 2837213 0 - 123690457 C e panTro4.chr3_GL389630_random 24396 5 - 103936 I a score=4635.000000 s hg38.chr3_KI270937v1_alt 49265 76 + 165607 aaagaatatatatatatatatatatataaagaatatatatatatatatatatatatatatatatatatataaagaa s panTro4.chr3_GL389630_random 24401 61 - 103936 aaaaaatatatatatat---------------atatatatatatatatatatatatatatatatatatataaagaa i panTro4.chr3_GL389630_random I 5 C 0 s papAnu2.chr2 187320907 17 + 187378091 -----------------------------------tatatatataaatacat------------------------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345616 41 + 91754291 --------------------------------acatatatacacacacacacacacacatatatatatataaa--- i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73825676 0 + 74750902 C e canFam3.chr33 2315179 13 - 31377067 I e macFas5.chr2 192400175 0 - 192460366 C e rheMac3.chrUn_JH291127 86816 47 - 111706 I e nomLeu3.chr11 2837213 0 - 123690457 C a score=546.000000 s hg38.chr3_KI270937v1_alt 49341 2 + 165607 ta s panTro4.chr3_GL389630_random 24462 2 - 103936 ta i panTro4.chr3_GL389630_random C 0 C 0 s calJac3.chr17 73825676 2 + 74750902 TA i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I e chlSab2.chr15 91345657 0 + 91754291 C e papAnu2.chr2 187320924 0 + 187378091 C e macFas5.chr2 192400175 0 - 192460366 C e rheMac3.chrUn_JH291127 86816 47 - 111706 I e nomLeu3.chr11 2837213 0 - 123690457 C a score=5640.000000 s hg38.chr3_KI270937v1_alt 49343 8 + 165607 tatatata s panTro4.chr3_GL389630_random 24464 8 - 103936 tatatata i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192400175 8 - 192460366 tacatatG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187320924 3 + 187378091 -----atg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345657 8 + 91754291 tacatatG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73825678 8 + 74750902 TATATACG i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I e rheMac3.chrUn_JH291127 86816 47 - 111706 I e nomLeu3.chr11 2837213 0 - 123690457 C a score=19203.000000 s hg38.chr3_KI270937v1_alt 49351 11 + 165607 ATCTTtgtatt s panTro4.chr3_GL389630_random 24472 11 - 103936 ATCTTtgtatt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2837213 11 - 123690457 ATCTTtgtatt i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192400183 11 - 192460366 ATCTTtgtgtt i macFas5.chr2 C 0 I 4 s papAnu2.chr2 187320927 11 + 187378091 atcTTTGTAtt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345665 11 + 91754291 ATCTTtgtatt i chlSab2.chr15 C 0 I 4 s calJac3.chr17 73825686 11 + 74750902 GCCTTtgtatt i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I e rheMac3.chrUn_JH291127 86816 47 - 111706 I a score=1244214.000000 s hg38.chr3_KI270937v1_alt 49362 541 + 165607 agggttccctagagggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatcgactcacacgatcacaaagtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagtgtaaccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtccgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacattcctctgcctgcttta-ttctggctatgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccattgccaacaccctcacagagagacacccaggaacaatacgttgcatccttcagtccaatcaagttgacactcaatattaaccttcacaG s panTro4.chr3_GL389630_random 24483 541 - 103936 agggttccctagagggtcaggactaataggatagaggtatatataaaggggagtttatgaaggagtatcgactcacacaatcacaaggtgagg-tccacaataggctgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaaactgacagtgcagccttaagtctgtggcagaaggcccaagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaagtccgatgtttgagggcaggaagcatccagcacgggagaaagatgaaggctggaagacttagccagtgtaa-tccttccacattcctctgcctgcttta-ttctggctacgctggcagctgattagattgtgtccacccagactgagagtgagcctgcctctcccagtccactgattcaaatattagtctccgttgccaataccctcacagagagacacccaggaacaatacgttgcatccttcagtccaatcaagttgacgctcaatattaaccttcacaG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2837224 541 - 123690457 agggttccctagatggtcaggactaataggatagatgtatatataaaggggagtttatgaaggagtatcgactcacaggatcacaaggtgagg-tccacaataggccgtctgcaagctgacaagcagggaagccagtctgaatcccaagatctcaaaagtagggaagccgacagtgcagccttaagtctgtggtcaaaggcccgagagcccctgacaaaccaccagtgtaagtccaagagtccaaaagctgaagaactggaaatccaatgttcgagggcaggaagcatccagcatgggagaaagatgaaggctggaagtcttagccagtataa-tccttccacgttcctctgcctgcttta-ttctggctatactggcagctgattagattgtgtccacccagactgagagtgagtctgcctctcccagtccactgattcaaatattagtctccgttgccaacaccctcacagagagacacccaggaacaatactttgcatccttcagtccaatcaagttgacgctcaatattaaccttcacaG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 86863 542 - 111706 agggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatcgacttacacaatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtacggaagccgacaatgcagcctcaagtctgtggccgaaggcccgagagcccctggcaaaccaccagtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcacgggggaaagatgaaggctggaagactcagccagtgtaa-tccctccatgttcctctgcctgctttatttctagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaagaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i rheMac3.chrUn_JH291127 I 47 C 0 s macFas5.chr2 192400198 542 - 192460366 agggttccctagagggacaggactaataggatagatgtatatataaaggggagtttatgaaggagtatcgactcacacaatcacaaggtgagg-tccacaataggccgtctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtacggaagccgacagtgcagcctcaagtctgtggccgaaggcccgagagcccctggcaaaccaccagtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcatgggggaaagatgaaggctggaagactcagccagtgtaa-tccctccatgttcctctgcctgctttatttctagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccgttgccaagaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacaG i macFas5.chr2 I 4 C 0 s papAnu2.chr2 187320938 541 + 187378091 agggttccctagagggacaggactgataggatagatgtatatataaaggggagtttatgaAGGAGTAtcgactcacacgatcacaaggtgagg-tccacaataggccgtctgcaagctgagagGCAGGGAAGCTAGTCTGAATCCCAAgatctcaaaagtagggaagccgacagcgCAGCCTTAAGTCTGTGGCCAAAGGtccgagagcccctggcaaaccactggtgtaagtccaagagtccaaaagctgaagaacttgaagtccgatgttcgagggcaggaagcatctagcacgggggaaagatgaaggctggaagactcagccagtGTAA-TCCTTCcgtgttcctctgcctgcttta-ttctagctacactggcagctgattagattgtgtctACCCAGATTgagagtgggtctgcctctcccagtccactggtTCAAATATTAGTCTCCGTTGCCAACaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccatcacag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91345680 541 + 91754291 agggttccctagagggacagggctaataggatagatgtatatataaaggggagtttatgaaggagtatcgactcacacgatcacaaggtgagg-tccacaataggccatctgcaagctgagaagcagggaagctagtctgaatcccaagatctcaaaagtagggaagccgacagtgcagccttaagtctgtggccaaaggcctgagagcccctggcaaaccaccggtgtaagtccgagagtccaaaagctgaagaacttgaaatccgatgttcgagggcaggaagcatctagcacgggggaaagatgaagcctggaagactcagctagtgtaa-tccttccatgttcctctgcctgcttta-ttctagctacactggcagctgattagattgtgtctacccagattgagagtgggtctgcctctcccagtccactgattcaaatattagtctccattgccaacaccctcacagagatacacccaggaacaatactttgtgtccttcagtccaatcaggttgacactcaatattaaccattgcaG i chlSab2.chr15 I 4 C 0 s calJac3.chr17 73825697 533 + 74750902 agggttctccagagggacaggacta-----atagatgtgtatacgaaggggagtttattaaggagtattgactcacatgatcatatggtgaagttccacaacaggctgtctgcaagctaagaagtaaggaagccggtctgaatcccaagacctcagaagtagggaagccgatagtgcagccttcagtctgtggccgagggcccaagggcccctggcaaaccgcaggtgtaagtgcaagagtcccacagctgaagaacctggagtctgatgtttgagggcaggaagcacccagcctgggaggatgatg-aggctggaagactcagcaagaggaactccttccatgttcctctgcctgcctta-ctcgaggtatgctggcaactgataagattgtggctacccagattcagggtgggtctgcctctcccagt-cactgattcaaatattagcctccattggcaacagcctcac--agatacacccaggagcaacactttgcctcc-tcagtccaatcaagttgacactcactattagccatcacaG i calJac3.chr17 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315179 13 - 31377067 I a score=363893.000000 s hg38.chr3_KI270937v1_alt 49903 140 + 165607 TCTTTGATCTGAGCAGACTCCAAAC--------TTACATGGAGAATGACTTCTCC---CAATAGGTGAAGCCACTCTCCTACATACAAAGCTGTAGCTTTACCCTCATATGGCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGC s panTro4.chr3_GL389630_random 25024 140 - 103936 TCTTTGATCTGAGCAGACTCCAAAC--------TTACATGGAGAATGACTTCTCC---CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACAAAACTGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2837765 140 - 123690457 ACTTTGATCTGAGCAGACTCCAAAC--------TTATATGGAGAATGACTTCTCC---CAATAGGTGAAGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGGCCCAAAGTGGAATGTAATGGAATCTCCATACAAAACCGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87405 148 - 111706 TCTTTGATCTGAGCAGACTCCAAACTGTCTACGTTATATGGAGAATGACTTCTCC---CAATGGGTGATGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTAGAATGTAATGAAGTCTCCATACGAAACCAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192400740 148 - 192460366 TCTTTGATCTGAGCAGACTCCAAACTGTCTACGTTATATGGAGAATGACTTCTCC---CAATAGGTGATGCCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATACGAAACCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187321479 148 + 187378091 tcttTGATCTGAGCAGACTCCAAACTGTCTACGTTATATGGAGAATGACTTCTCC---CAATAGGTGAAGTCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCCATGCAAAACCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91346221 148 + 91754291 TCTTTGATCTGAGCAGACTCCAAACTGTCTACATTACATGGAGAATGACTTCTCC---CAATAGGTGAAGTCACTCTCCTATGTACAAAGCTGTAGCTTTACCCTCATATGCCCCAAAGTGGAATGTAATGAAGTCTCTATACAAAACCAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73826230 147 + 74750902 TCCTTGATCTGAGCAGACTCCAAACTGCCCACTTTATCTGGAGGAGGA-TTCCCC---CAGTGGGCAAAGCCACCCTCTTATGTACAGAGCCGTAGCTCTACCACCATACTCCCCAAAGTGTAATGTAATGAAGTCTCCATACAAAACCAC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2315192 127 - 31377067 TCTCTGACCTGAGCAGACCCTAAAC-----------TATG--------CTTTTCTTAACAGTAGGTGAAGCCCCTCCCATACATGCAACGTTGTGACTTTACCCTCAAACACCCCAAAG-----TGTAATCAAGCCTCCATATAAAACCAC i canFam3.chr33 I 13 I 127 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I a score=747699.000000 s hg38.chr3_KI270937v1_alt 50043 292 + 165607 AGTCACAGCATTCATTTATCAAGAagcaagcacacagcacagatgagttcgctggtgaattttagcagatatt-taaggggaaataatacctattttctgcaatcttttccagaagatagaagcaggaggaatacttcctaagtcattt------gtcactgtcaccctaatgccaaaacgggacaaagacattacaagac----gactatagaccaatatatctc----acatagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaagaattataggccattac s panTro4.chr3_GL389630_random 25164 292 - 103936 AGTCACAGCATTCATTTATCAAGAagcaagcacacagcacagatgagttcgctggtgaattttaccaaatatt-taaggggaaataatacctattttctgcaatcttttccagaagatagaagcaggaggaatatttcctaagtcattt------gtcactgtcaccctaatgccaaaaccagacaaagacattacaagac----gactatagaccaatatctctc----acatagatgcaaaaattaccaacaaaatattagcaaatacagttcaacaatatgtaaaaagaattataggccatgac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2837905 292 - 123690457 AGTCACAGCATTCATTTATCaagaagcaagcacacagcacagatgagttcgctggtgcattttaccgaatatt-taaggggaaataatacctattttctgcaatcttttccagaagatagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctagtaccaaaaccagacaaagacattacaagat----gactatagaccaatatctctc----acacagatgcaaaaattaccaacaaaatattagcaaatagagttcaacaatatgtaaaaagaattataggccatgac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87553 296 - 111706 AGTCACAACATTCATTTATCAAGAagtaagcacacagcatagatgacttcgctggtgaattttaccaaatatt-taagggaaaataatacctattttctgcaatcttttctagaagacagaagcagcaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaccattacaagacgactgactatagaccaatatctctc----acatagatgcaaaaattaccaaccaaatattagcaaattgagttcaacaatacgtaaaaagaattataggccatcac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192400888 296 - 192460366 AGTCACAACATTCATTTATCAAGAagtaagcacacagcatagatgacttcgctggtgaattttaccaaatatt-taagggaaaataatacctattttctgcaatcttttctagaagacagaagcagcaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaccattacaagacgactgactatagaccaatatctctc----acatagatgcaaaaattaccaaccaaatattagcaaattgagttcaacaatacgtaaaaagaattataggccatcac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187321627 296 + 187378091 AGTCACAGCATTCATTTATCAAGAAGTAAGCACACAGCATACATGACTTCGCTGGTGGATTTAACCAAATATT-TAAGGGGAAATAATATCTATTTTCTGCAATCTTTTCTGGAAGACAGAAGCAGGAGGAATACTTCCTAAGTCATTT------GTCAGTGTCACCCTaatgccaaaaccagacaaaaacattaCAAGACGACTgactatagaccaatatctctc----acatagatgcaaaaattaccaacaaaatattagcaaattgagtTCAACAATACGTAAAAAGAATTATAGGCTATCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91346369 296 + 91754291 AGTCACAACATTCATTTATCAAGAagcaagcacacaacatagatgacttagctggtgaattttaccaaatatt-taaggggaaataatgcctattttctataatcttttctggaagacagaagcaggaggaatacttcctaagtcattt------gtcagtgtcaccctaataccaaaaccagacaaaaacattacaagacaactgactatagaccaatatctctc----acatagatgcaaaaattaccaacaaaatattagcaaattgagttcaacaatacgtaaaaagaattataggccatcac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73826377 282 + 74750902 AGTCACAGCATTCATTTCTCAAGAATTaagcacacaacacagaggggttcgctggtgaattgtgcaaaatatt-taaggagaa--aatacctattttgtgcaatcttttccagaagacagaagc---aggactaccccctaagtcattg------gtcagtgtcaccctaataccgaaac----caaagacgttaccagaa----gactatagaccagtatctgtc----acgaagatgcaaaaattagcaac-aaatattagcaaatcaagttcaacaatatataaaaagaattataggccatgac i calJac3.chr17 C 0 I 3482 s canFam3.chr33 2315446 301 - 31377067 AATCCTAGCATTCATTTATCAAGAATTaagtacatagcccaaatggattcactggtgagttctaccaaacactgcaggaagagactctttcagttctctataatctctttcagaagattgaagcagagggaatacctcctaactcagtctatgaggccagcgttacccta-taccaaaaccagaaagaaaaaaaaaaaaa-----aaccctacaggaatatctctcatgaacatagatgcaaaaatcttcaacaaaacattagcaaataaaatccaacagtgaataaaaagaattacatgccatgaa i canFam3.chr33 I 127 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I a score=208132.000000 s hg38.chr3_KI270937v1_alt 50335 93 + 165607 caacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccgttacatcaacaggctagagaagaaaaat s panTro4.chr3_GL389630_random 25456 93 - 103936 caacagagatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgcaatccattacatcaacaggctagagaagaaaaat i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2838197 93 - 123690457 caacagggatttatcccaggtatgcaagactagttcactattcaaaaatcagctaatgcaatccgtgacatcaacaggctagagaagaaaaat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 87849 93 - 111706 caatagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i rheMac3.chrUn_JH291127 C 0 I 461 s macFas5.chr2 192401184 93 - 192460366 caatagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaagctagagaagaaaaat i macFas5.chr2 C 0 I 449 s papAnu2.chr2 187321923 93 + 187378091 CAACagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagcTAATGTAATCTGTTACATCAACAagctagagaagaaaaat i papAnu2.chr2 C 0 I 1913 s chlSab2.chr15 91346665 93 + 91754291 caacagggatttatcccaggtatgcaagactggttcaatattcaaaaatcagctaatgtaatctgttacatcaacaaactagagaagaaaaat i chlSab2.chr15 C 0 I 203 s canFam3.chr33 2315747 92 - 31377067 caagtggcatttagtccaggt-tgcaaggctgattcaacaatcgaaaatcaattagtgcaatctatcacatcaacagaataaagaagaaaaat i canFam3.chr33 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I a score=4137.000000 s hg38.chr3_KI270937v1_alt 50428 8 + 165607 cacatgat s panTro4.chr3_GL389630_random 25549 8 - 103936 cacatgat i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2838290 8 - 123690457 cacatgat i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2315839 8 - 31377067 catatgat i canFam3.chr33 C 0 I 669 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e chlSab2.chr15 91346758 203 + 91754291 I e papAnu2.chr2 187322016 1913 + 187378091 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I a score=2225.000000 s hg38.chr3_KI270937v1_alt 50436 11 + 165607 cggccaggcat s panTro4.chr3_GL389630_random 25557 11 - 103936 cggccaggcgt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2838298 11 - 123690457 cggctgggcac i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91346758 203 + 91754291 I e papAnu2.chr2 187322016 1913 + 187378091 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I a score=123584.000000 s hg38.chr3_KI270937v1_alt 50447 293 + 165607 ggtggctcacgtctgtaatcccagcactttgggaggccgaggcaggcggatcacgagttcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaacacaaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggtgtgaacccaggaggcggagattgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctcaaaaaataaataaataaataaa s panTro4.chr3_GL389630_random 25568 275 - 103936 ggtggctcacgtctgtaatcccagcactttgggaggccgaggtgggcggatcacgaggtcgggagatcgagactatcctggctaacacggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtggtgggcgcctgtagtcccagctgcttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagattgcagtgagccgagatcacaccactgcactccagcctgggtgacagagtgagactctgtctcaaaa------------------ i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2838309 293 - 123690457 ggtggcttacgcctgtaatcccagcactttgggaggttgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaaacacaaaaaattagctgggcgtggtggcgggcacctgtagtcccaactacttgggaggctgaggcaggagaatggcgtgaacccaggaggtggagattgcagggagctgagatcgtgccactgcactccaggctgggcgacagagcgagactccgtctcaagaaaaaaaaagaagaagaaa i nomLeu3.chr11 C 0 I 2287 s chlSab2.chr15 91346961 268 + 91754291 ggtggctcatgcctataatcccagcactttggaaggctgaggcgggcgaatcacaaggttaggaattcaagaccagcctggccaatatggtgaaaccctgtctctattaaaaatacaaggag-tagccaggcatggtggtcagcgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccgagaggcgaaggttgcagtgagctgagaacgcacc-ctgcattccagcctgggcgacagagtgagactctgtct----------------------- i chlSab2.chr15 I 203 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e papAnu2.chr2 187322016 1913 + 187378091 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I a score=16594.000000 s hg38.chr3_KI270937v1_alt 50740 72 + 165607 taaataaataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaa s panTro4.chr3_GL389630_random 25843 71 - 103936 -aaaaaaataaataaataaataaaagaatatctacaaaaacctacagctaacatcatccttaacggtgagaa i panTro4.chr3_GL389630_random C 0 I 4277 s chlSab2.chr15 91347229 67 + 91754291 -----aaatagacaaataaataaaagaatatctacaaaaaccaactgctaacatcatccttaatggtgagaa i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e papAnu2.chr2 187322016 1913 + 187378091 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I e nomLeu3.chr11 2838602 2287 - 123690457 I a score=81536.000000 s hg38.chr3_KI270937v1_alt 50812 1047 + 165607 attagatgctttcccctaagattagtaacaaggcaagaacgtcccctctcaccatcgattctcaacatcctgctggaggtcttggccaatgcaactagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaacaaaactgcttt-gttcacagatgacacaatcatctatgttaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagacaagtttcatgatataaggttagtgtcctaacgtcaacagctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaatatttgagcaagacaggaaacaaaaaaa-gaaaaatgaataataaaattaaatacatatgaccatttacattagcatcccccaaaatgaaatactgaggtgtaaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatgaacaggaagactc----ttttttttttttttttttgagatggagtctccctctgtcacccaggctggagtgcagtggcaccatctcagctcactgcaacctcagcctcccgggttcaagcaattctcttgcctcagcctcatgagtagctgggattacaggcacacaccaccacgcctggctaatttttttttgtatttttagtagagatagggtttcggcattttggccaggctgatctcaaactcctgacctcaggtgatccaccctcctcggcatcccaaagtgctgggattataggtgtgcgccagcacaacaggccagaagactcaatattattaagatagcagttctcaatattatcaagatagcagcagatcaagatagccaacttgatctacagattctacataatgacacaatcttaatcaaaatcccaggaagttatttgtagatatggataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaaatcaatattgat s chlSab2.chr15 91347296 1016 + 91754291 actagatgctttcccctaagatgaggaagaaggccaggatgtcccctcctacca---attttcaacatcatactggaggtcttggccaatgcaacaagacacaaaagggaaataaaaggtatacagaataaaaaggaagaaataaaactgtttttgttcacagatgacacaatcatctatgtaaaaaaatctaagagttgacaaaaggaaaaaaccccagaacaaagaagcaatttcagccaagtttcatgatgtaaggttagtgtcccagcgtcaatggctttcgtgtgtgccagcaaagaacaattggaatttagaattaaaaacaTTTGAGCAAGATAGGAAGCAAAAAAAAGAAAAACTAATAAtaaaattaaatacacattaccatttacattagcatcccccaaaatgaaatactgaggtataaatgtaacaaaatatgtacaagatctatatgagaaaaactataaaactctgatgaaagatatcaaagaacttcataaatgggatgacattctatgtttatggacaggaagattcaaatttattttattttatttttgagacggagtctccctctgtcacccaggctggagtgcaatggcgccatctcagctcactgcaacctcagcctcccaggt--------------------------------agctgggattacaggtacacatcaccatgcctagctagttttttt--gtatttttagtagagacagggtttcaacattttggccaggctgatctcaaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattataggtgtgagccactgcgccaggccagaagactcagtattattaagatagcagttctcaatattatcaagatagcaacagatcaagatagccaacttgatctacagattgtacataataacacaatcttaatcaaaatcccaggaagttatttgtagagattgataaactggctctaaagtttatgtggagaggcaaaagatccaaaatagccaactcagtattgat i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e papAnu2.chr2 187322016 1913 + 187378091 I e macFas5.chr2 192401277 449 - 192460366 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I e nomLeu3.chr11 2838602 2287 - 123690457 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=2025.000000 s hg38.chr3_KI270937v1_alt 51859 12 + 165607 ggagaatggtca s macFas5.chr2 192401726 12 - 192460366 ggcgaacagttg i macFas5.chr2 I 449 C 0 s chlSab2.chr15 91348312 12 + 91754291 ggagaacagtcg i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e papAnu2.chr2 187322016 1913 + 187378091 I e rheMac3.chrUn_JH291127 87942 461 - 111706 I e nomLeu3.chr11 2838602 2287 - 123690457 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=65514.000000 s hg38.chr3_KI270937v1_alt 51871 120 + 165607 gaggactgataccacctgacttcaaggcttactctaaagctatagtcatgaaagcagcatgatactggcaaaagaatagacaaatagatcaatggaacagaatagagagcccagaatatt s rheMac3.chrUn_JH291127 88403 120 - 111706 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaaccgcatgatactggcaaaagaatagacaaatagatcaatgggacagaatagagagcccagaatatt i rheMac3.chrUn_JH291127 I 461 C 0 s macFas5.chr2 192401738 120 - 192460366 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaaccgcatgatactggcaaaagaatagacaaatagatcaatgggacagaatagagagcccagaatatt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91348324 120 + 91754291 gaggactgatatcacctgacttcaaggcttactctaaagctatagtcatgaaaactgcatgatactggcaaaagaatagacaaatagatcaatggaacagaacagagagcccagaatatt i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e papAnu2.chr2 187322016 1913 + 187378091 I e nomLeu3.chr11 2838602 2287 - 123690457 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=273240.000000 s hg38.chr3_KI270937v1_alt 51991 358 + 165607 aaaagtaatatttctaatagacctgtataaatgtgtcaactgatctttgacaaagcagcagaggccacacaatggagcagagatagtgttttcaataaatgacgctgggacaaccggacatccacaaggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatctagacacagaccttatacctttcataaaaactcaaaatgaatcataaacctcaat------aaaatgcaaaactgtaagactcccagaagataatataggagaaaatctaaatgaccttgagtatggtgatgacattttagatacaatagcaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt s rheMac3.chrUn_JH291127 88523 354 - 111706 aaaagtaatatttctaatcgacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgtttacaacaaacgatactgggacaactggacattcacatgc---------aaaaaaataaatatatttatatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaaaataacataggagaaaatctaaatgaccttggggatggtgatgacttcttagatacaataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192401858 355 - 192460366 aaaagtaatatttctaatcgacctgtataaatgtgtcaactgatctttgacaaaggagcagaggctatgcaatggagcagagatagtgtttacaacaaacgatactgggacaactggacattcacatgc--------aaaaaaaataaatatatttatatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgaccttggggatggtgatgactttttagatacaataccaagggcatgatccatgaaggaaataattgatgagctgaacttcattaacatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187323929 328 + 187378091 aaaagtaaTATTTCTAATAGACCTGTATAAATgtgtcaactgatctttgacaaaggagcagaGGCTATGCAATGGAGC------------------------CTCTG---CAACTGGACATTCACacgc--------aaaagaaataaatatatttatatatagacacAGACTTTATACCTTTCATaaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatGACCTTGGagatggtgatgactttttagatacgaTACCAAGGGCATGATCCATGAAGGAAATAATTGATGAGCTGAACTTCATTAACATT i papAnu2.chr2 I 1913 C 0 s chlSab2.chr15 91348444 353 + 91754291 aaaagtaatatttctaatcggcctgtatacatgtgtcaactgatctttgacaaaggagcagaggccatgccatggagcagagatagtgttttcaacaaacgatactgggacaactggacattcacacgc----------aaaaaataaatatatttatatatagacacagaccttatacctttcataaaaactcagaatgaatcataaacctcaataaaatgaaaatgaaaaactgaaagac-ccaagaagataacataggagaaaatctaaatgacctgggagatggtgatgactttttagatacgataccaagggcatgatccatgcaggaaataattgatgagctgaacttcattaacatt i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e nomLeu3.chr11 2838602 2287 - 123690457 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=324758.000000 s hg38.chr3_KI270937v1_alt 52349 246 + 165607 aaaaacttcttctctgtgaaaggcaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagacttttatct-aaaatatacaaagagccgggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaagcggatcaattgaggtcaggcgttggagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcg s nomLeu3.chr11 2840889 246 - 123690457 aaaaacttcttctctgtgaaaggcaatggcaagaaaatgaaaatatttgcaaaagtctcatctgattaaagactgttatct-aaaatatacaaagagccaggtgcactggctcagacctgaaatctcagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaccagcctggccaacatgttgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcg i nomLeu3.chr11 I 2287 C 0 s rheMac3.chrUn_JH291127 88877 247 - 111706 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcacacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i rheMac3.chrUn_JH291127 C 0 I 7 s macFas5.chr2 192402213 247 - 192460366 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcacacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcatttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187324257 247 + 187378091 AAAAACTACCTCTCTGTGAAAGACAATggcaagagaatgaaaatatatgCAGAAGTCCCATCTGATTAAAGACTGTTatctaaaaatacacaaagagccaggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcagatcacttgaggtcaggcgtttgagaacagcctggccaacatggggaaaccctgtctctattaaaaacacaaaaattagctgggtgtggtggtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91348797 247 + 91754291 aaaaacttcctctctgtgaaagacaatggcaagagaatgaaaatatttgcaaaagtcccatctgattaaagactgttatctaaaaatacacaaagagccaggtgcactggctcagacctgaaatcccagcactttgggaggctgaggtaggcggatcacttgaggtcaggcgtttgagaacagcctggccaacatggggaaaccctgtctctattaaaaatacaaaaattagctgggtgtggtggtg i chlSab2.chr15 C 0 I 7 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=-1169.000000 s hg38.chr3_KI270937v1_alt 52595 25 + 165607 ggcgccattactactaccagtagta s nomLeu3.chr11 2841135 7 - 123690457 gacgcct------------------ i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192402460 7 - 192460366 catgcct------------------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187324504 7 + 187378091 catgcct------------------ i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91349044 7 + 91754291 I e rheMac3.chrUn_JH291127 89124 7 - 111706 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=377633.000000 s hg38.chr3_KI270937v1_alt 52620 324 + 165607 gtaatcccagctactcgggaggctgaggcaggataatcacttgaacccaggaggcggagattgcagtgaactgagatcgcgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaata---ttaattaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccagttttttaaatgggtaaaaaaactgaacatacatatca---ccaaagaagacattcacatggcacataagcatctacaaagatgttcaacatcgtatgtcattagggaaccgcaaacaacgcgaaacccatg s nomLeu3.chr11 2841142 318 - 123690457 gtaatcccagctactcaggaggctgaggcaggataatcacttgaatccgggaggtggaggttgcagtgagctgagatcacatcactgcatgccagcctgggcaacagagtgagagtctgtctcaaaaaataacattaattaattaacgaaatatacaaataactcttacaactcaacaataagaaaatgaataacccagttttt------------aaaactgaacatacatatcatcaccaaagaagatattcacatggcacataagcatctacaaagatattcaacatcgtatgtcattagggaactgcaaacaacgtgaaaccaata i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 89131 320 - 111706 gtaatcccagctactcggaaggccgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgaactgagatttcacctctgcgcgggagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaactgaacatacatatca---ccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--atgtccttagggaactgcaaacatcgcacaac----- i rheMac3.chrUn_JH291127 I 7 C 0 s macFas5.chr2 192402467 320 - 192460366 gtaatcccagctactcggaaggccgaggcaggagaatcgcttgaacccgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaactgaacatacatatca---ccaaagaaggtattcatatggcacataagcatctaaaaagacgttcaacatc--atgtccttagggaactgcaaacatcgcacaac----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187324511 320 + 187378091 gtaatcccagctactcagaaggccgaggcaggagaatcgcttgaatccgggaggcggagattgcagtgaactgagattgcacccctgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaaaCTGAACATACATATCA---CCAAAGAAGGTATTCACATGGCACATAAGCATCTAAAAAGGCGTTCAACATC--ATGTCATTAAGGAACTGCAAACATCGCACAAC----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91349051 315 + 91754291 gtaatcccagctactcagaaggccgaggcaggagaatcgcttgaacctgggaggcggagattgcagtgaactgagattgcaccactgcacgtcagcctaggcaaaagagtgagattctgtctcaaaaaataataatatttaattaattaaatatacaaataactcttacaactcaacaataagaaaatgaacaacccaattttttaaatgggtaaaaaacctgaacatacatatca---ccaaagaaggtattcacatggcacataagcatctaaaaagacgttcaacatc--a-----ttagggaactgcaaacatcgcacaac----- i chlSab2.chr15 I 7 C 0 e ponAbe2.chr3_random 174270 2711 - 20583478 I e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=1066623.000000 s hg38.chr3_KI270937v1_alt 52944 666 + 165607 cacacccgttagaatgaccacaatcgccaggcatcgtggctcacaactgtactcaatacacacctgttagaatgaccacagtcaccaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcaggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaattaaaaaattatatgggcacggtagcatgtgactgtggtcccagctactctggaggctgagatggcaggattgcttgagcccaggaggttgaggctgcagtgagccgcgatccagccttcactccagcctgagcaatggagtgagaccccgtctc------------aaaagaaaaagaaaaaaagaatgatcaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattgctggtgggaaggcaacatggtacaaccactttggaagacaatttggcagtttcttttttttttttttttttggagatggagtct--ggctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcaagctccgcctcccgggttcacgcgattctcctgcctcagcctcctcagcagctgggaccacaggcgcccgcaattt s ponAbe2.chr3_random 176981 658 - 20583478 CACACCTGTTAGAATGATCACAATCGCCAGGCACCGTGGCTCACACCTGTACTcaatacacacctgttagaatgaccacaatcaccaggcactgtggctcacacctgtactcccagcactttgggaggctgaagcaggaggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaacattaaaaaattatatgggcacggtagcctgtggctgtggtcccagctactctggaggctgaggtggcaggattgcttgagcccaggaggttgaggctgcagtgagccgtgatccagccttcactccagcctgagcaatggagtgagaccctgtctc------------aaaggaaaaagaacaaaagaatgatcaaaatccacagcgctgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattgctggtgggaaggcaacatggtacaaccactttggaagacaattcagcagtttctttttttttt--------ggagatggagtct--ggctctgtcacccaggctggagtgcagtggcgcgaactcggctcactgcaagctccgccttccgggttcacgcgattctcctgcctcaccctcctgagtatctggaaccacaggtgcccgcaattt i ponAbe2.chr3_random I 2711 C 0 s nomLeu3.chr11 2841460 666 - 123690457 cacacctgttacaatgaccacaatcgccaggcaccgtagctcacagctgtgctcaatacacacccgttacaatgaccacaatcgccaggcactgtggctcacacctgtgctcccagcactttgggaggctgaagcaggcggatcactggagcccaggagtttgagaccagcctgggcaacaaagcaagatcccatctctacaaaaaatttaaaaattgtatgggcacggtggcacgtgactgtggtcccagctactctggaggctgaggtgagaggatggcttgagcccagg-ggttgaggctgcagtgaaccatgatccagcctgcactccagcctgagcaacagagtgagaccctgtctc------------aaaagaaaaagaaaaaaagaatgatccaaatccacagcactgaaaacttcaaacgctgtccgggatgtggagcaaacaggaaccctccttcattgctggtgggaaggcagcatggtacaaccactctggaagacaatttggcagtttgtttttttctt--ttttttggagatggagtctccgcttttgtcgcccaggctggagtgtagtggcacaatcttggctcactgcaagctccgcctctcaagttcacacgattctcctgcctcagcctcctgagtagctgggaccacaggtgcccgcaattt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 89451 616 - 111706 -----------------------------------------------------caatacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgatgctggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcattgaaaacttcaaatgctgttcaggatgtggagc-aacaagaactctccttcattaccggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatt---tttcttgagacggagttt--caccctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccgcaattt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192402787 616 - 192460366 -----------------------------------------------------caatacacacctgttagaatgaccacaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactctggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaaaatccacagcattgaaaacttcaaatgctgttcaggatgtggagc-aacaagaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatt---tttcttgagacggagttt--caccctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccgcaattt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187324831 616 + 187378091 -----------------------------------------------------CAatacacacctgttagaatgaccACAattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcaTGGTAGCaggtgactgtggtcccagctactccagaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctgtaccccagcctgagcaacacagtgagaccctgtctc------aaaagaaaaagaaaaagaaaaaaagaatgaccaAAATCCACAGCACTGAAAACTTCAAATGCTGTtcaggatgtggagc-aacaggaacccTCCTTCATTACTGGTGGGAAGGCAACATGggacaaccactttggaagacaattcggtagtttatttttttatt---tttcttgagacggagttt--cactctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagccctgcctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccgcaattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91349366 622 + 91754291 -----------------------------------------------------caatacacacctgttagaatgaccgcaattgccaggcattgtggctcacacctgtactcccagcactttgggagactgaagcaggaggatgacttgagcccaggagtttgagaccagtctgggcaacaaagcaagatcccatctctacaaaatattaaaaaattatatgagcatggtagcaggtgactgtggtcccagctactccggaggctgaggtgggaggattgcttgagcccaggaggttgaggctgcagtgaggcatgatccagcctataccccagcctgagcaacacagtgagaccctgtctcaaaagaaaaagaaaaagaaaaagaaaaaAAGAAtgaccaaaatccacagcactgaaaacttcaaatgctgttcaggatgtggagc-aacaggaaccctccttcattactggtgggaaggcaacatggtacaaccactttggaagacaattcggtagtttatttttttatt---tttcttgagacggagttt--cactctgtcacccaggctggagtgcagtggcgtgatctcggctcactgcaagctctggctcctgggttcacgcgattctcctgcctcagtctcccgagtagctggaactacaggtgcccacaattt i chlSab2.chr15 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73826659 3482 + 74750902 I e canFam3.chr33 2315847 669 - 31377067 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=1147754.000000 s hg38.chr3_KI270937v1_alt 53610 521 + 165607 ggcactttcttaccaaact-aaaccatactcttactatgcagtccagcgatcacactccttgatatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttatagcagctttattcataatttatagcagctttattcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataacctatggtgcattcagacgatggaatattattcagtactaaaatgaaatgaactacacagccatgaaaatacat-------acagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctatttaccttacggttgcaattatatgacattctggaaaaggtaaaactatggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagcacagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaaca---tttatgtta----- s ponAbe2.chr3_random 177639 520 - 20583478 ggcagtttcttaccaaact-aaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcatatggaggtttatagcagctttattcataatttatagcagctttattcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgagtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactacacagccatgaaaatacat-------acagaaaatttaaatgcata-tactatgtgaaagaag-caatctgaaaagtctatttaccttacaactgcaattatatgacactctggaaaaggtaaaactatgaagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagcacagaggatttttagggcatggaaactagttatttttctgtatgatgctacaatggcagaaaca---tttatgtta----- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2842126 521 - 123690457 ggcagtttcttaccaaact-aaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggacagaaaacgtttttgtccacacgaaaacctgcacatggaggtttatagcagctttattcataatttatagcagctttattcataattgccaaaacttggaagcaaccaagatgtccttcagcaggtgaacgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactacacagccatgaaaatacat-------acagaaaacttcaatgcata-tactgtgtgaaagaagacaatctgaaaaggctatttaccttatgactgcaattatatgacattctggaaaaggtaaaactatggagacagtgaaaagatcagtggttgccaggggttggggatgaataagtgaagcacagaggatttttagggcactgaagctactaatttttctgtatgatgctacaatggcagaaaca---tttatgtta----- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 90067 499 - 111706 ggcagtttcttaccaaacc-aaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacacgaaaacctgcacatggag----------------------atttatagcagctttattcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgaatgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacat-------acagaaaacttaaatgcata-tactatgtgaaagaagagaatctgaaaaggctacttacctcatgattgcaattatatggtattctggaaacggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagcacagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaaca---tttatttta----- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192403403 521 - 192460366 ggcagtttcttaccaaacc-aaaccatactcttactatgcagtccagcaatcacactccttggtatttacccaaagggatggaaaatgtttttgtccacacgaaaacctgcacatggagatttatagcagctttattcataatttatagcagctttattcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgaatgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacat-------acagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatggtattctggaaacggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagcacagaggatttttagggcactgaaactacttatttttctgtatgatgctacaatggcagaaaca---tttatttta----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187325447 528 + 187378091 ggcagtttcttaccaAACC-AAACCATACTCTTACTATGCagtccagcaatcacactccttggtatttacccaaagggaTGGAAAATGTTTTTGTCCACATGAAAACCTGCACATGGAgatttatagtagctttattcataatttatagcagctttattcataattgccaaaacttggaagcaatcaagatgtccttcagcaggtgaatggGTAAACAATCTATGGTACATTCagatgatggaatattattcagtgctaaaatgAAATGAACTATACAGCTATgaaaatacatacagaaaacagaaaacttaaatgcata-tacTATGTGAAAGAagacaatctgaaaaggctacttACCTCATGATTGCaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgTTAGGGATGAATAAGtgaagcacagaggatttttagggcaccgaaactatttatttttctgtatgatgctacaatggcagaaaca---tttatttta----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91349988 521 + 91754291 ggcagtttcttaccaaacc-aaagcatactcttactatgcagtccagcaatcatactccttggtatttacccaaagggatggaaaatgtttttgtccacatgaaaacctgcacacggagatttatagcagctttattcacaatttatagcagctttattcataattgccaaaacttggaagcaatcaagatgcccttcagcaggtgagtgggtaaataatctatggtacattcagacgatggaatattattcagtgctaaaatgaaatgaactatacagctatgaaaatacat-------acagaaaacttaaatgcata-tactatgtgaaagaagacaatctgaaaaggctacttacctcatgattgcaattatatgatattctggaaaaggtaaaattatggagacagtaaaaagatcagtggttgccaggcgttagggatgaataagtgaagcacagaggatttttagggcactgaaactacttatgtttctgtatgattctacaatggcagaaaca---tttttttaa----- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73830141 495 + 74750902 ggcagtttcttacaaaaatgaaaccattctcttactacccagtctagcaatcacactcgggggtatttacccaaagggacggaaaacttttttgtccacacaaaaacctgtacgtggat----------------------gtttatagcagccttattcataattgccaaaacttggaagcaaccacgatgtccttcagcagggg------------acgtacggaacactcagacgacggaatagtgttcagcgctaaaatgaca--aactatacagccacaaaaagccat-------acagaaaactgcaatgcatgttgccatgtgaaagaaggcaatctgaaaaggctacttaccttatgattcccatcacatgacgttctggaaagggcaaaattatggagacagtaaaaagatccgtggttgccagggcttagggctgaacaggtggagcacagaggaggtttagggcactgaaaatacttgtttttctatatgatgctacaatggcagaaacatattttattttgttttg i calJac3.chr17 I 3482 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I e panTro4.chr3_GL389630_random 25914 4277 - 103936 I a score=2245903.000000 s hg38.chr3_KI270937v1_alt 54131 828 + 165607 ttttattttttgagattgagtctcactctgtcgcccagaatggagtgcagtggtgcgatctctgctcactgcaacctccacctcccgggttcaagcgattctcctgcctcagc--------------------cttccatgtagctaagactacaggcatgcgccaccacacccggctaatttttgtatttttagtagagatgggttttcgccgtgttggccaggctggtctcgaactcctga-tctcaaagagatccacccgcctccacctcccaaagtgctgagattacaggcatgagccactgcgccgggccagccgatacgttgttgaatagagaatggagaatatccaacgccaaaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcatcgactgtcacac--gtgccacct--ggtgcagggcgttggtggtgggggaggctgggcgtaggtatatgtgtgtgtggcagggggcatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct--aaaaagcaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAAAAGAATTAAGCACACATGGCACTAACGGGGCGGCTAGGGAGCCAACCATCCATCAGTTGTGAGGAAGGGGGAGGCCTGCAGGCATGAAGGAGCTGGTGAGACCGCCCTCACCTGGCTGCCAGAATCCCAATTCCATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCAGAAGGTCCAAAAGTTACAACTTACCTGAAACCCACCAGGCACTATTGGCAAAGGATTCAC--CC s panTro4.chr3_GL389630_random 30191 827 - 103936 ttttattttttgagatggagtctcactctgtcccccagaatggagtgcagtggtgtgattttgactcaatgcaacctctgcctcccaggctcaagcgattctcctgcctcagc--------------------cttccaagtagctaagactacaggcatgcgccaccacacccgggtaatttttgtatttttagtagagatgggttttcgc-gtgttggccaggctggtctagaactcctga-tctcaa-gagatccacccgcctccacctcccaaagtgctgagattacaggcatgagccactgtgcctggccAGCCGATACATTGTTGAATAGAGAATGGagaatatccaacgccagaaatgtgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcctcgactgtcacac--gtgccacct--ggtgcagggcgctggtggtgggggaggctgggcgtaggtatatgtgtgtgtggcagggggcatatgggaactttctgtattttccactcaggacaattttgctgtaaacgcaaaactgctct--aaaaagcaaattttattatttaaaaGATGatttttaaaattaatatatttaaatttttaaaaGAATTAAGCACACATGGCACTAAGGGGGCGGCTAGGGAGCCAACCATCCATCAGTTGTGAGGAAGGGGGAGGCCTGCAGGCACGAAGGAGCTGGTGAGACCGCCCTCACCTGGCTGCCAGAATCCCAGTTCCATGAGGACCTTGTCATGTGACTCAAAGTCAGAGACAGCAGACGGTCCAAAAGTTACAACTCACCTGAAACCCACCAGGCACTACTGGTAAAGGATTCAC--CC i panTro4.chr3_GL389630_random I 4277 C 0 s ponAbe2.chr3_random 178159 829 - 20583478 ttttattttttgagactgagtctcactctgtcgcccaggatggagtgcagtggtgtgatctcgactcactgcaaccaccgcctcccaggctcaagcagtgctcctgcctcagc--------------------cttccgtgtagctgggattacaggtgtgcaccaccacacccggctaatttttgtatttttagtagaaatgggttttcaccatgttggccaggctggtctagaactcctga-tctcaa-gagatccacccccctcgacctcccaaagtgctgggattacaggcatgagccactgcgcctggccagcggatacattgttgaatagagaatggagaatatccaacgccaaaaatgcgctgtcaactctggactt----tgatgaggatatgttgacgtggacgcatcgactgtcacacatgtgccacct--ggtgcagggcgttggtggtgggggaggctgggcataggtatacgcatgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct--aaaaagtaaattttattatttaaaaGATGatttt-aaaattaatatatttaaatttttaaaaGAATTAAGCACACATGGCACTAAGGGGGCGGCTAGGGAGCCAACCGTCCCTCAGTTGTGAGGAAGGGGGAGGCCCGCAGGCATGAAGCAGCTGGTGAGACCGCCCTCGCCTGGCCGCCGGAATCCCAATTCCATGAGGACTTTGTCATGTGACTCAAAGTCAGAGACAGCAGAAGGTCCAAAAGTTACAACTTACCTAAAATGCACCAGGCACTATTGGCAAAGGATTCAC--CC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2842647 825 - 123690457 ttttattttttgagac-gagtctcactctgtcgcccaggatggagtgcagtggtgcaatcttgactcactgcaacctccgcctcctgggttcaagcgactgtcctgcctcagc--------------------cttccacgtagctgagactacacgtgtgcgccatcatgcccggctaatttttgtatttttagtagagatgggttttcgccatgttggccaggctggtctagaactcctga-tctcaa-gagatccacccgcctcgacctcccaaagtgctgggattacaggcatgagccactgcacccggccagccgatacattgttgaatagagaatggagaatatccagtgccaaaaatgcgctgtcgactctggactt----tgatgaggatatgttgacgtggacgcatcgactgtcacacgtgtgccacct--ggtgcagggcgttcgtggtgggggaggctgggcgtaggtatatgcgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtaaacccaaaactgctct--aagacgtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTGAAAAGAATTAAGCACATATGGCACTAAGGGGGCGGCTAGGGAGCCCACCGTCCATCAGTTGTGAGGAAGGGGGAGGCC-GCAGGCACGAAGGAGCTGGTGCGACCGCCCTCACCTGGCCGCCAGGATCCCAATTCCATGAGGACTTTGTCATGTGACTC--AGTCAGAGACAGCAGAAGGTACAAAAGTTACAACTTACCTGAAACCCACCAGGCACTATTGGCAAAGGATTCAC--CG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 90566 842 - 111706 ttttattttttgagatgcagtctcgctctatcgcccaggatggagtgcagtggtatgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaaccagctcctcagtcttccaagtagctgagactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagat-gggtttcgccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcccgaccagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggacgcatggactgtcacacatgtgcccccc---gtgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgcttt--aaaaagtaaattttattatttaaaaGATGatttt-aaaattaatatatttaaatttttaaaaGAATTAAGCACACATTGTACTGAGGGGGTGGCTAGGGAGTCAACCGTCCGTCAGTTGTGAGGAAGTGGAAGGCCAGCAGGCACGAAGGAACTGATGAGACAGCCCTCACCTGGCCGCCAGAATCCCACTTCCGTGAGGACTTCGTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGAAACCCACCAGGGACTATTGGCAAAGGATTCAC---- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192403924 843 - 192460366 ttttattttttgagatgcagtctcgctctatcgcccaggatggagtgcagtggtatgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaggcatgaaccaccgcgcccgaacagccgatacattgttgaatagagaat---gaatgtccaacgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacgtggacgcatggactgtcacacatgtgcccccc---gtgcagggtgttgatggtgggggaagctgggcgtatggatatgtgtgtgtggcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgcttt--aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAAAAGAATTAAGCACACATTGTACTGAGGGGGTGGCTAGGGAGTCAACCGTCCGTCAGTTGTGAGGAAGGGGGAGGCCAGCAGGCACGAAGGAACTGATGAGACAGCCCTCACCTGGCCGCCAGAATCCCACTTCCGTGAGGACTTCGTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGAAACACACCAGGGACTATTGGCAAAGGATTCAC---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187325975 843 + 187378091 ttttattttttgagatggagtctcgctctatcgcctaggatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgagactacaggtgtgcgtcaccacatccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctga-ccccaa-gagatccacctgccttggcctcccaaactgctgggattacaggcatgaaccatcgcgcCTGACCAGCCGATACATTGTTGAATAGAGAAT---GAATGTCCAACGCCAAAAATGAACTGTAAACTCTGGACTT----TGATGAGGATATGCTGATGTGGACGCATGGACTGTCACACATGTGcccccc---cTGCAGGGTGTTGATGGTGGGGGAAGCTGGGCatatggatatgtgtgtgtggcagggggtatatgggaactttctgtattttccacttaggaaaattttgctgtgaacctcaaactgctct--aaaaagtaaattgtattatttaaaagatgatttt-aaaattaatatatttaaatttttaaaagaattaagcaCACATTGTACTGAGGGGGTGGCTAGGGAGTCAACCGTCCGTCAGTTGCGAGGAAGGGGGAGgccagcaggcaggaaggaaCTGATGAGACAGCCCTCACCTGGCCGCCAGAATCGCAATTCCCTGAGGACTTCCTCATGTGACTCAGAGTCGGAGCCAGCAGAAGGCCCAAAAGCTACGACTCACCCGAAACCCACCAGGGACTATTGGCAAAGGATTCAC---- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91350509 827 + 91754291 ttttattttttgagatggagtctcactctatcgccgaggatggagtgcagtggtgtgatctcgactcactgcaacctctgcctcccaggctcaagcgattctcctgcctcagctttccaactagctcctcagtcttccaagtagctgatactacaggtgtgcgtcatcacacccagctaatttttgtatttttagtagagatggggtttcgccatgttgaccaggctggtcttgaactcctgatccccaa-gagatccacctgcctcggcctcccaaactgctgggattacaagcatgaaccaccgcgcctgaccagccgatacattgttgaatagagaat---gaatgtccagcgccaaaaatgaactgtaaactctggactt----tgatgaggatatgctgacacagactcatggactgtcacacacgtgcccccc---gtgcagggtgttgatggtgggggaggctgggcatatggatatgcgtgtgt-gcagggggtatatgggaactttctgtattttccactcaggaaaattttgctgtgaacctaaaactgctct--aaaaagtaaattttattatttaaaaGATGATTTT-AAAATTAATATATTTAAATTTTTAAAAGAATTAAGCACACATCGTACTGAGGGGGCGGCTAGGGAGTCAACTGTCCGTCAGTTGCGAGGAAGGGGGAGGCCAGCAGGCACGAAGGA------------------ACCTGGCCGCCAGAATCCCAATTCCGTGAGGACTTCGTCATGTGACTCAGAGTCGGAGACAGCAGAAGGCCCAAAAGCTACGACTCACCCGAAACCCACCAGGGACTATTGGCAAAGGATTCACCC-- i chlSab2.chr15 C 0 I 524 s calJac3.chr17 73830636 810 + 74750902 ttttattttttgagacggagcctcgctctgtcacccaggctggagtgcagcggcatgaccttggttcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagc--------------------ctcccaagtagctgggattataggcgcgcgacaccatgctcagccaatttttgtatttttagtagagtcagggttttaccatgttgcccaggtt-ttcttgaactcctga-cctcaa-gagatctgcctacctcaacctcccaaattgctgggattacaggcatgagccaccgcgcccggccagcagatacactgttgaatgga-------gaatgtccgacgccaaaagtgaactgtagacgctggaccttgagtgatgaggataggttgctgtggatgcatcggctgtcacaaatgtaccccctctggcgcaggatgttgatggtgggggaggctgtgcgtgcgcagatg-gtgtgtggcagggggtatatgggaactttctgtatctcccactctggaaaattttgctgtgaacctaaaactgctctaaaaaaagtaaattttattgtttaaaaGATGatttt-taaattaatatacttaaatttttaaaaGAATAAAGCACACATGGCACTAAGGGGGCAGCTTGGGAGCCAAGCACCCGTCAGTTGCGAGGAAGAG--AGGCCCGTAGGCACG-TGGAGCTGGTGAGACTGCCCTCACCTGGCCAGCAGAATCCCAAGTCCATGAGGGCTTTGACGTGTGACTCAAGGTCAGAGACAGCAGAAGGTCCAAACGTGACAATTCATCCGATACCCCC---------------AAGGACTCAC--CC i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I a score=54044.000000 s hg38.chr3_KI270937v1_alt 54959 31 + 165607 CCACCATGGAAGGCACGTGAGCGCTGTGGGT s panTro4.chr3_GL389630_random 31018 31 - 103936 CCACCATGGAAGGCATGTGAGCGCTGTGGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 178988 31 - 20583478 CCACCGTGGAAGGTATGTGAGCGCTGTGGGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2843472 31 - 123690457 CCACCATGGAAGGCATGTGAGCGCTGTGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 91408 31 - 111706 CCGCCATGGAAGACGTGGGAGCGCTGTGGGC i rheMac3.chrUn_JH291127 C 0 I 697 s macFas5.chr2 192404767 31 - 192460366 CCGCCATGGAAGACGTGGGAGCGCTGTGGGC i macFas5.chr2 C 0 I 628 s papAnu2.chr2 187326818 31 + 187378091 CCGCCATGGAAGACGTGGGAGCGCTGTGGGG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73831446 31 + 74750902 ATGCGCAGTTAGATATACGACTGCTGTAGGC i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91351336 524 + 91754291 I a score=6736.000000 s hg38.chr3_KI270937v1_alt 54990 5 + 165607 GCCCT s panTro4.chr3_GL389630_random 31049 5 - 103936 GCCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 179019 5 - 20583478 GCCCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2843503 5 - 123690457 GCCGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92136 5 - 111706 GCCGC i rheMac3.chrUn_JH291127 I 697 C 0 s macFas5.chr2 192405426 5 - 192460366 GCCGC i macFas5.chr2 I 628 C 0 s papAnu2.chr2 187326849 5 + 187378091 GCCGC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73831477 5 + 74750902 ACTGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I e chlSab2.chr15 91351336 524 + 91754291 I a score=1977807.000000 s hg38.chr3_KI270937v1_alt 54995 708 + 165607 GTGTCATCAACTGCGGAGA-AAGGAAACCAGAAAGAGCAAAAGCAAAGCAGCGAGTGGGGAGCAGACCCGCCCCAAACCCAAGGTCCCTCCTCCCCTGTCCACCTTCACA------------------CACTAAGCAATGGAGGGAGCGGGAGGACAGAGCCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGCTGGGAGCTTGCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGCCAGGGACCGTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTCTGggccaggtgtggtggctcacacctataatcccagcactttgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttctaccaaaaatataacaaattagctgggcgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagcgagactgggtctcaat---aataataataataataat-------------gaaaGtagggctgtccaatttagcaaatgaaaatacaagcagcccagcttaaatttcagattaaccacaaataattgttttagtttaaagatatcccatgaact s panTro4.chr3_GL389630_random 31054 708 - 103936 GTGTCATCAACTGCGGAGA-AGGGAAACCAGAAACAGCAAAAGCAAAGCAGCGAGTGGGGAGCAGAACCGCCCCGAACCCAAGGTCCCTCCTCCCCCGTCAACCTTCGGA------------------CACTAAGCAATGGAGGGAGCGGGAGGACAGAGTCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGTTGGGAGCTTGCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTCTGGCccaggtgtggtggctcacacctataatcccagcactttgggaggccgaggcaggcaagtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtttctaccaaaaatataacaaattagctgggcgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccaggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggtgacagagtgagactcggtctcaat---aataataataataataat-------------GAAAGtagggctgtccaatttagcaaatgaaaatacaagcagcccagtttaaatttcagattaaccacaaataattgttttagtttaaagatatcccctgaact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 179024 711 - 20583478 GTGTCAGCAACTGTGGAGA-AGGGAAACCAGAAAGAGCAAAAGCAAAGTAGCGAGTGGGGAGCAGAACCACCCCAAACCCGAGGTCCCTCCTCCCCCGTCCACCTTCGGA------------------CACTAAGCAATGGAGGGAGCGGGAGGACAGAGTCTGTGTTTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAGGGTTGGGAGCTTGCTACCCCTGAAGGAGACCCACAGATTGGAGGGAAGAGAGGAGGCAGGGACCCTCGTGGGAGAGGATGCATTAAAAGTAGGGCTGTCTGggccaggtgtggtggctcacacctataatcccagcactttgggaggccgaggcaggcaggtcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccatttctaccaaaaatataaaaaattagctgggtgtggtggcgcacacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccgggaggcggagcttgcagtgagccgagatggcaccactgcactccagcctgggcaacagagtgagacttggtctcaataacaataataataataataat-------------aaAAGtagggccgtccaatttagcaaatgaaaatacaagaagcccagcttaaatttcagattaaccacaaataattgttttagtttaaagatatcccatgaact i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2843508 709 - 123690457 GTGTCATCAGCTGCGG-------------CGAAAGAGCAAAAGCAAAGCGGCGAGTGGGGAGCAGAACCGCCCCAAACCCAAGGGCCCTCCTCCCCCGTCCATCTTCGGA------------------CACTAACCAATGGAGGGAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCCCCTCCCGAGGCAGAGGAGAGGCCCAATACCTGGGAGAAGGCTGGGAGCTTGCTACCCCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACTCTGGTGGGAGAGGATGCCTTAAAAGTAGGGCTGTCTGggccaggtgcggtggctcacacctataatcccagcactttgggaggccgaggcaggcaggtcacctgaggccaggagttcaagaccagcctgaccaacatggtgaaaccccgtttctaccaaaaatataaaaaattagctgggcgtggtggcacatacctgtaatcccagctacttgggaggctgagacaggagaatcccttgaaaccgggaggcggagcttgcagtgagctgagatggcaccactgcactccagcctgggcgacagagcgagactcggtcttaat---aataataataataataataacaataataataaAAAGtagggctgtccaatttagcaaatgaaaatacaagaagccaagcttaaatttcagattaaccacaaataattgttttagtttaaagatatctcatgaact i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 92141 710 - 111706 GTGTCATCAACTGTGGAGATTGGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGCAGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCGCGTCCA-CTTCCGA------------------CGCTGAGCAATGGAGGGAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCGTGGGGGGAGGTTGAGAGCTTGATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTCTGggccaggtgcggtggcttacgcctataatcccagcactttgggaggccgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcttggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacccaggaggtgatggttgcaatgagcccagttggcaccactgcgctccagcctgggagacagagcgagactcggtctcaaataaaatacaaacaaaaataat-------------aaaaGtagggctgtccgatttagcaaatgaaaatgtaggaagctcagcttaaatttcagattaaccacaaataattgttttagtgtaaagacatcccatgaact i rheMac3.chrUn_JH291127 C 0 I 184 s macFas5.chr2 192405431 710 - 192460366 GTGTCATCAACTGTGGAGATTGGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGCAGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCCCGTCCA-CTTCCGA------------------CGCTGAGCAATGGAGGGAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCGTGGGGAGAGGTTGAGAGCTTGATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCTGTCTGggccaggtgcggtggctcacgcctataatcccagcactttgggaggccgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcttggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacccaggaggtgatggttgcaatgagcccagttggcaccactgcgctccagcctgggagacagagcgagactccgtctcaaataaaatacaaacaaaaataat-------------aaaaGtagggctgtccgatttagcaaatgaaaatgtaggaagctcagcttaaatttcagattaaccacaaataattgttttagtgtaaagacatcccatgaact i macFas5.chr2 C 0 I 183 s papAnu2.chr2 187326854 710 + 187378091 GTGTCATCAGCTGTGGAGATTGGGAAACCGGAAAGAGCAAAAGCAAAGTGGTGAGTGGGGAGCAGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCCCGTCCA-CTTCCGA------------------CACTGAGCAATGGCGGAAGCGGGAAGACAGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCCTGGGGGAAGGTTGAGAGCTTGATA-CGCTGAAGGAGACCCGCAGAttggagggaagagaggaggcgGGGACCCTGGTGGGAGGCGATGCATTAAAAGTAGGGCtgtctgggccaggtgcggtggctcacgcctataatcccagcactttgggaggccgaggcaggcggatcaccagagatcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctatcaaaaatataaaaaattagctgggcctggtggcacacacctgtaatcccagctacttgggaggctgagacaggagactcccttgaacctgggaggcgatggttgcaatgagccgagttggcaccactgcactccagcctgggagacagagcgagactcagtctcaaataaaataaaaacaaaagtaat-------------aaaagtagGGCTGTCCGATTCAGCAAATGAAAATGTAGGAAGCTCAGCTTAAATTTCAGATTAACCACAAATAATTGTTTTAGTTTAAAGATATCCCATGAACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91351860 708 + 91754291 GTGTCATCAACTGTGGAGATTGGGAAACCGGAAAGAGCAAAAGCAAAGTGGCGAGTGGGGAGCAGAGCTGCCCCAAACCCAAGGTCCGTCCTCCCCCGTCCA-CTTCCGA------------------CACTGAGCAATGGAGAGAGCGAGAAG--AGAGTCTGTGTGTGATGGACAGCTCCTCCCGAGGCAGAGGAGAGGCCTGATGCCTGGGGGGAGGTTGAGAGCGTGATA-CGCTGAAGGAGACCCGCAGATTGGAGGGAAGAGAGGAGGCGGGGACCCTGGTGGGAGGCGGTGCATTAAAAGTAGGGCTGTCTGggccaggtgcggtggctcacgcctataatcccagcactttgggaggctgaggcaggcggatcaccagaggtcaggagttcaagaccagcctgaccaacatggtgaaaccctgtctctaccaaaaatataaaaaattagctgggcgtggtggcacacacctgtaatcccagctactcgggaggctgagacaggagactcccttgaacctcggaggctatggttgcaatgagccaagttggcaccactgcactccagcctgggcaacagagcgagactcagtctcaaataaaataaaaacaaaaataat-------------aaaaGtagggctgtccgatttagcaaatgaaaatatgggaagctcagcttaaatttcagattaaccacaaataatcgttttagtttaaagatatcccatgaact i chlSab2.chr15 I 524 C 0 s calJac3.chr17 73831482 711 + 74750902 GCGCCATCAACTGTGGGGA-AGGAAAACCAGGAAGAGCAAAAGCAAAGTGGCAAACGGGAAGCAGGCCCGCCCCAAACCCAAGGTCCCTCCTCCCCCGTCCATCTTCAGACACAGCTTCCCCTGCTGCCACTGTGCAATGGAGGAAGCAGGAGGACGGAGTTCGTGTGT-----------TCTCCCGAAGCAGACAAGAGATGCAGTGCCTGGGAGAATGATGGGGGCTTGCTACCGCTGAAGGAGCCCTGCAGATTGGAGAGAAAAGAGGAGGTGGGGAGCCTGGTGGGAGAGGATACATGAAAAGTTGGGCTTTCTAggccaggcatggtggctcacgcctataatcccagcactttgggagaccgaggcaggtggatcacctgaagtcaggagtttgagaccagcctgaccagcacgatgaaaccccatctctaccaaaaatataaaaaactagccaggggtggtgacgcacgcctgtagtcccagctactcaggaggttgagtcaggagggtcccttgaacctgggaggcagaggttgcagtgagccaagatggtgccactacactccagcctgggcgacagagtgagactccggcttaaa------aaaaaataaactaat-------------aaaaGtaaggctgtctgattcagcaaatgaaaatacaggaggc-cagcttaaatttcagattaaccacaaataactggtttagtataaagacatcccatgaacc i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I a score=498892.000000 s hg38.chr3_KI270937v1_alt 55703 179 + 165607 atttggaacattcttgtatatttttaagtgttcaccgtttatccgaggttctcatttaagtggctgttctgtgttttCTTGGTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCCAAGAAAGGAGAGGGCACCTGGGGACACCCTTCTCTAGCTGGAC s panTro4.chr3_GL389630_random 31762 179 - 103936 atttggaacattcttgtatatttttaagtgttcaccgtttatctgaggttctcatttaagtggatgtcctgtgttttCTTGGTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACAGCACGGGAGGAGGAGGCGTCCCGAGAAAGGAGAGGGCACCTGGGGACACCCTTCTCTAGCTGGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 179735 174 - 20583478 atttggaacattcttgtatattttcaagtgttcaccatttatccaaggttctcatttaagtggacgtcttgtgttttCTTGGTG-----AGTCAAAGCCGCTGAGGCCCTGACTACACAGGAGGAGGAGGTGTCCCGGGAAAGGAGAGGGCAGCTGGGGACACCCTTCTCTAGCTGGAC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2844217 178 - 123690457 atctggaacattcttgtctatttttaagtgttcatcatttatctgaggttctaatttaactgggcgtcctgtgttttCTTGTTGAGCCCAGTCAAAGCCGCTGAGGCCCTGACTGCATGGGCGGAGGAGGCGT-CCGGGAAAGGAGAAGGCACCTGGGGACACCCTTCTCTAGCTGGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93035 176 - 111706 atttGGAACATTCTTGTATATTTTTaagtgttcatcgtttatctgaggttctcatttaactggacgtcctgtgttttCTTGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCGTCCCAAGAAAGGAGAGGGCACCTGGGGACACCCTTCTCTAGCTG--- i rheMac3.chrUn_JH291127 I 184 C 0 s macFas5.chr2 192406324 176 - 192460366 atttGGAACATTCTTGTATATTTTTaagtgttcatcgtttatctgaggttctcatttaactggacgtcctgtgttttCTTGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGAGGCGTCCCAAGAAAGGAGAGGGCACCTGGGGACACCCTTCTCTAGCTG--- i macFas5.chr2 I 183 C 0 s papAnu2.chr2 187327564 176 + 187378091 ATTTGGAACattcttgtatatttttaagtgttcatCGTTTATCTGAGGTTCTCATTTAACTGGACATCCTGTGTTTTCTTGGTGAGCCCAGTCAAAACCACTGAAGCCCTGACTGCATGGGAGGAAGAGGCGTCCCAGGAAAAGAGAGGGCACCTGGGGACACCCTTCTCTAGCTG--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91352568 176 + 91754291 atttggaacattcttgtatatttttaagtgttcatcgtttatctgaggttctcattgaactggacatcttgggttttCTTGGTGAGCCCAGTCAAAGCCACTGAGGCCCTGACTGCATGGGAGGAAGGGGCGTCCCAGGAAAGGAGAGGGCACCTGGGGACACCCTTCTCTAGCTG--- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73832193 177 + 74750902 atttcggacgttcctg--tgtttttaagtgtccgtcatttatccaaggttctaatttaactggacgtcctgtgttttcttggtgaacccAGTCAAAGCTGCTGAGGCCCTGACTGTGAGGGAGGAGGAGACATCACAGGAAGGGAGAGGGCACCGGGGAACACCCTCCTCTAGCTGGAC i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2315847 669 - 31377067 I a score=82114.000000 s hg38.chr3_KI270937v1_alt 55882 31 + 165607 AGGGAGCTGCCCCTTCACGAGTGGGACAGTC s panTro4.chr3_GL389630_random 31941 31 - 103936 AGGGAGTTGCCCCTTCACGAGTGGGACAGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 179909 31 - 20583478 AGGGAGCTTCCCCTTCACGAGTGGGACAGTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2844395 31 - 123690457 AGGGAGATGCCCCTTCACAAGTGGGACAGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93211 22 - 111706 ---------CCCCTTCATGAGTGGGACAGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192406500 22 - 192460366 ---------CCCCTTCATGAGTGGGACAGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187327740 22 + 187378091 ---------CCCCTTCATGAGTGGGACAGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91352744 22 + 91754291 ---------CCCCTTCATGAGTGGGACAGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73832370 31 + 74750902 AGGGAGCTGCCCCTTCATGAGTGGGACAGTT i calJac3.chr17 C 0 I 316 s canFam3.chr33 2316516 31 - 31377067 AAGGAAAGGCCTCTTGGTGAGTGGTGCAGTC i canFam3.chr33 I 669 C 0 e mm10.chr16 32782661 928 + 98207768 I a score=1850458.000000 s hg38.chr3_KI270937v1_alt 55913 581 + 165607 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTACAAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCA---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGACCCCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAAGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTGATAGGTCACTGGCATGATGCACCCCTTTACGCATTTACTGGCACCAGAAAGTGATATCATGGCCACT-ATTAAAGTGTGGGGCGCACCCACGGAATTCGTTTCCATTCAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGACTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT s panTro4.chr3_GL389630_random 31972 584 - 103936 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTTGCTACAAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCATGGGGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGACCTCTG------CTGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGAG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCACAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTAACAGGTCACTGGCATGATGCACCCCTTTACGCATTTACTGGCACCAGAAAGTGATACGATGGCCACT-ATTAAAGTGTGGGGCGCACCCACGGAATTCGTTTCCATTCAAATGCTTTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGACTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 179940 581 - 20583478 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTACGAGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACTGACTGACCCT--------TCCCCA---GGGTGCCAGGTATGAGTTTGCTTGGAAGAGAGAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCA-GCAGCTGGGACAACTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTGGGGCAAAGCTTAGCCAAATACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGTAGGCCTGAAGTAAGTGGC--TTAATGACTGGGATGATGAGTAATAGGTCACTGGCATGAGACACCCCTTTACGCATTTACTGGCACCAGAAAGTGATATGATGCCCACT-ATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCGTTCAAATGCTCTGCGTACTTTGGTGGCCAATC------------------CCCCTCTCAAAGGATGAAGGCAGGACTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCAGCTCATGTTGTCTTCATCATTGCTGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2844426 589 - 123690457 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTACAGGTGGTCTGGATTCTGTCGCTTTGGCCCCTGGAATAAAATAACAGACTGACCCTTAGCAAACTTCCCA---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAGAGAAGGGCGCAGAC-CCCCATCCCCTG------CAGGTGGCA-GCAGCTGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTGGGGTGAAGCTTGGCCAAAGACACAGACTCCCTTGTGCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGTAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATGATGAGTAATAGGTCACTGGCATGATATACCCCTTTACGCATTTATTGGCACCAGAAAGTGATATGATGCCCACG-ATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATTCAAATGCTCTGCATACTTTGGTGGCCAATC------------------CCCCTCTCAAGGGATGAAGGCAGGACTGGCTGTGGCAGAAGCTTCAGATGAGGTCTCTGGTGAGAGAAGTTCCACCTCACGTTGTCTTCATCATTGCTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93233 583 - 111706 AGAAGGACAAGAACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCAAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGCGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTCTCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATAATGAGTAACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGACATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATTCAAATGCTTTGCATAATATGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGACTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTAT i rheMac3.chrUn_JH291127 C 0 I 15 s macFas5.chr2 192406522 583 - 192460366 AGAAGGACAAGAACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGCGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTCTCTGGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAGTGGC--TTAATGACTAGGATAATGAGTAACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGACATGCTGTCCACTCATTAAAGTGTGGGGCACACCCATGGAATTTGTTTCCATTCAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGACTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187327762 583 + 187378091 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGGCTCGGG--AGTGGCAAAGGGAGCTATCTAGGGCAAAGCTTGGCTAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGGAGCCTTCCAGAAACTCCCCGCAGGCCTGAAGTAAATGGC--TTAATGACTAAGATAATAAGTAACAGGTAACTGGCATGATACACACCTTTACGCATTTATTGGCACCAGAAAGTGACATGCTGTCCACTCATTAAAGTGTAGGGCACACCCATGGAATTTGTTTCCATTCAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGACTGGCTATGGCAGAAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91352766 582 + 91754291 AGAAGGACAAGGACACAACCATCCATTTTCGTCAGCTCATTCCCTGGCTCCGAGTGGTCTGAATTCTGTCGCTTTGGCCCCTGGAATAAAAGAACTGACTGACCCT--------TCCCCG---GGGTGCCAGGTGTGAGTTTGCTTGGAAGAAATAAGGGTGCAGAC-CCCCGTCCCCTG------CTGGTGGCAGGCAGCCGGGACACCTTCAGTGGACTCGGG--AGTGGCAAAGGGAGCTATCTAGGGCAAAGCTTGGCCAAAGACACAGACTCCCTTGCCCATTCTTCCCTGCT-TCAAAGAAGCCTTCCAGAAACTCCCCGTAGG-CTGAAGTAAGTGGC--TTAATGACTAGGATAATAGGTAATAGGTAATTGGCATGACACACACCTTTACACATTTATTGGCACCAGAAAGTGACATGCTGCCCACACATTAAAGTGTGGGGCACACCCATGGAATTTGTTCCCTTTCAAATGCTTTGCATAATTTGGTGGCCAATT------------------CCCCTCACAAGGGATGAAGGCAGGACTGGTTGTGGCAGGAGCTTCAGATGAGGTCTCTGGTCAGAGAAGTTCCACCTCACATTGTCTTCATCATTGCTGT i chlSab2.chr15 C 0 I 15 s calJac3.chr17 73832717 574 + 74750902 agaaGGACATGGGCACAACCATGCGTTTTCCTCAGCATACTCCCTGGTTCTGAGTGCTCTGGATTCTGTCACTTTGG-GCCTGGAATGAAAGAACTGACTGGCTCT--------TCTCCA---GGGTGCCAGGCATGAGTTTGCTTGGCAGAGAGAAGAGCGCGGAC-CCCTGTCTCCTGCTCTTCCTGGTGGCAGGCAGCTGGAACACCTTCAGTGGGCTCAGC--AGTG---------GCCATCTGGGACAAAGCGCGACCAGAGACACAAATTCCCTTGCCCCTTCTTCCCTGCTCTTGAAGGAGCCTTCCAGAAATTCCCCACAGG-CTGAAGTCAGGGGC--TTAATGACCAGGATGATGAGTAATAGGTAACTGGCGTGATATGCCCCTTCAAGCATTTACTGGCACCAGAAAGTGGTGTGCCGCCCACTCATGAAGGTATGGGGCGTGCCCATGGAATGTACGTCCATTC-ACTGCTTTGTATAATTTGGTGGCCAGT-------------------CCCCTCACAAAGGATGAAGGCAGGACTGGCTGTGGCCGAAGCTTCAGATGAGGTCTCTGGGCAGAAAAGTTCCACCTCATGCTGTCT---TCATTGCTGT i calJac3.chr17 I 316 C 0 s canFam3.chr33 2316547 545 - 31377067 AGA----------------------------TCAGCCCACCCGCCGAATCTGTGTGATGTGGATTCTGCTGCTTATGCACCTAGAATG-AAGAACTGATGGACCCT--------TCTTCA---GGGTTCCAGGCCCGTGTTAGCCTGGCAGAGGGGGAGAAGCCTCCACCCCATTCCCAG------TTGGT-GCAGGCAGTTGAAACACCCTCAGTGGGCCCGGGGCACCCTTAAAGGGAGCTGTCTGG----------------AGACA----------TGCTTATACTTCCCTGTTCTCCAAGGAACCTTCCAGAAAATCCCCATGAGCTTAAGATGAGCAGCTTTTAAAGACCAAGATAGCAAACAATGGATAACTGGCATCGTAGACCAATGTAAACATTTATTGATGCCAAAAAATGAC-----GCCCACTCATTTGAATTTGGGGTACACCCGTGGGATCAGTTGCCATTC-AGTGCTTTCCACTCACTGGTggcggcccccccccgccccccccccgccccTTACAGAGGTTGAACAAAGGACTGGCTGTGGCGGGAGCTTCAGCTGAAGTCTCTTGTCACAATAGTCCCACCTCACGTTGTCTTCGTCACGGCCTT i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I a score=6363.000000 s hg38.chr3_KI270937v1_alt 56494 8 + 165607 GGAGTTTC- s panTro4.chr3_GL389630_random 32556 8 - 103936 GGAGTTTC- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 180521 8 - 20583478 GGAGTTTC- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845015 8 - 123690457 GGAGTTTT- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192407105 4 - 192460366 ----CTTC- i macFas5.chr2 C 0 I 11 s papAnu2.chr2 187328345 4 + 187378091 ----CTTC- i papAnu2.chr2 C 0 I 11 s calJac3.chr17 73833291 8 + 74750902 GGAGTTTC- i calJac3.chr17 C 0 C 0 s canFam3.chr33 2317092 8 - 31377067 -GTGTTTTT i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e chlSab2.chr15 91353348 15 + 91754291 I e rheMac3.chrUn_JH291127 93816 15 - 111706 I a score=679945.000000 s hg38.chr3_KI270937v1_alt 56502 207 + 165607 GCCGTCTCAGAGCTCACACCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCATGCTTAAATTTGTCTTTATAAAAC--GTGGCATTTTTACCTCATATACACACA-CTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA s panTro4.chr3_GL389630_random 32564 209 - 103936 GCCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCACGCTTAAATTTGTCTTTATAAAACATGTGGCATTTTTACCTCATATACACACA-CTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGGACTTCTGGCTCCTGTTAGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA i panTro4.chr3_GL389630_random C 0 I 3019 s ponAbe2.chr3_random 180529 209 - 20583478 ACTGCCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGTCATCTTGTTTAGGTCCATGCTTAAATTTGTCTTTATAAAACATGTGGCATTTTTACCTCATATACACACA-CTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGTACTTCTGGCTCCTGTTGGCTTGGTAACATTACTCCTGCTATCTTTGGTTATCCCCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845023 207 - 123690457 GCCGTCTCAGAGCTCACGCCGAGTCACAGGTGACTTTAGACAGGCCATCTGGTTTAGGTCCACGCTTAGATTTGTCTTTATAAAAC--GTGGCATTTTTACCTCATATACATACA-CTTCAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGCTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 93831 210 - 111706 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCACGCTTAAATTTGTCTTTATAAAACATGTGACATTTTTACCTCATATACACACACCTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA i rheMac3.chrUn_JH291127 I 15 C 0 s macFas5.chr2 192407120 210 - 192460366 GCCGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCACGCTTAAATTTGTCTTTATAAAACATGTGACATTTTTACCTCATATACACACACCTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA i macFas5.chr2 I 11 C 0 s papAnu2.chr2 187328360 210 + 187378091 GCTGTCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAGACAGGCCATCTTGTTTAGGTCCACGCTTAAATTTGTCTTTATAAAACATGTGACATTTTTACCTCATATACACGCACCTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACGTTACTCCTGCTAACTTTGGTCATCTCCA i papAnu2.chr2 I 11 C 0 s chlSab2.chr15 91353363 210 + 91754291 GCCATCTCAGAGCTCACGCCAAGTCACAGGTGACTTTAAACAGGCTATCCTGTTTAGGCGCACGCTTAAATTTGTCTTTATAAAACATGTGACATTTTTACCTCATATACACACACCTTTAGAATCTTAAATAGCTGGAGAGTTTTCTCCAGGCACTTCTGGCTCCTGTTGGTTTGGTAACATTACTCCTGCTAACTTTGGTCATCTCCA i chlSab2.chr15 I 15 C 0 s calJac3.chr17 73833299 204 + 74750902 ACCAACTCACAGTTCACGCAGAGTCGCCGGGGACTTCAGACGGGCTGTCTTG-TTAGGACTACGCTTCCATTTGTCTTTATAAAAC--GTGACAGTTTTACCTCACATGCACCC--CTTTGGAATCTTCAATCTCTGGAGAGTTTTCTCCGGGTGCTTTTGGCTCCTGCTGGTTTGGTAACATTACTCCTGGTAAGGTTGACCAT-TCCA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2317100 202 - 31377067 ---GCCTGTGTGTTTGTGCT--GTCACAGGTGACTTTAGCCAGGCTATCTTGTTTAAGTCCACACCCCGCTCCATTTTCATGAAATATGTGCCA-TTTCACCTCATACACACACA-CCTTTAAGTCTTAAATAACTGGAGAATTTTCCCCAGGC-CTTCGGGTTCTTGCTGCTGTTCTTGCATTAGTTCTGCTAATTCTGGTCATCTCCA i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I a score=27568.000000 s hg38.chr3_KI270937v1_alt 56709 20 + 165607 GTAATACAGGCGTGcacaca s ponAbe2.chr3_random 180738 20 - 20583478 GTAATACAGGCGTGcacaca i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845230 20 - 123690457 GTAATACAGGCATGCACGCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94041 20 - 111706 GTAATAGAGGTGTGCGcaca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192407330 20 - 192460366 GTAATAGAGGTGTGCGcaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187328570 20 + 187378091 GTAATATAGGTGTGTGCgcg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91353573 20 + 91754291 GTAATACAGGTGTGTGcacg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73833503 14 + 74750902 GGAATACA------CACACA i calJac3.chr17 C 0 I 49 s canFam3.chr33 2317302 7 - 31377067 GTAATtc------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=135775.000000 s hg38.chr3_KI270937v1_alt 56729 119 + 165607 cacacacacacac----------------acacacacacacacacacacacacacacaGTCTCTCTTCCTCTTTATTGTCCCCCCCCAACCCAC---CCACATGCAATCATAATGATACATTTTAGTTCCCAAATGCT s ponAbe2.chr3_random 180758 90 - 20583478 cacacacacacac----------------acaca--------------------------cTCTCTTCCTCTTTCTTCTCCCCCC---ACCCAC---CCACAGGCAATCGTAATGATACATGTTAGTTCCCAAATGCT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845250 111 - 123690457 cacacacacacac----------------acacacacacacacaTTCTCT----------CTTTCTTCCTCTTTATTGTTCCCCC-CAACCCCCGCACCACATGCAATCATAATTATACTCTTTAGTTCCCAAATGCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94061 111 - 111706 cacacacgcacat--------acacatttacacacacacacacaTTCTC------------TTTCTTCCTCTTTATTGTTCCTCC----CACCA---CCACATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192407350 115 - 192460366 cacacacgcacata----cacacacatttacacacacacacacaTTCTC------------TTTCTTCCTCTTTATTGTTCCTCC----CACCA---CCACATGCAATCATAATGAAACATTTTAGTTCCCAAATGCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187328590 124 + 187378091 tacatacacacatacgcgcacacacatacacacacacacacacattctctctt-------ttttcttcttctttattgtCCCCCC----TACCA---CCACATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91353593 107 + 91754291 cacacacacacat----------------acatacacacacacaTTCTCTCTC--------TTTCTCCCTCTTTATTGTCCCCCC----CCCCA---CCACATGCAATCATAATGATACATTTTAGTTCCCAAATGCT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2317309 75 - 31377067 -----------------------------------------------------------tctctctctctctctctctctctctc-tcacacac---acacacacacacaTAATTATACACTTTAGTTCCCAAATGCT i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73833517 49 + 74750902 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=521574.000000 s hg38.chr3_KI270937v1_alt 56848 311 + 165607 TCTAATTTG---TGTTGTTCTTGTTGACGttttgagacacggtctcgctctgtca-ccaggctggagtgcagtgacgcaatctcagctcactgcaacctccgcctcccaggttcaagtgattctcctgcctcacccttttgagtagttgggattacaggcacctgccactatgcccagctaatttgtgtatttttagtagagacaggatttcaccatgttgcctgggttggtctcaaactcctggcctcaagtgatccgcctgcctcggcctctcaaagtgctgggattacaggcatgagccaccgcacccagtc s ponAbe2.chr3_random 180848 314 - 20583478 TCTAATTTGTGTTGTTGTTGTTGTTGATGttttgagacagggtctcgctctgtca-ccaggctggagtgcaatgatgtaatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcacctgccactacacccagctaatttgtgtatttttagtagagacaggatttcaccatgttgcctaggttggtctcaaacttctgtcctcaagcgatctgcccgcctcggcctctcaaagtgctgggattacaggcgtgagccaccacacccagcc i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845361 310 - 123690457 TCTAATTCG---TGTTGTTGTCGTTGATGttttgagacacggtctcgctctgtcacccaggctggagggcagtgacgcagtctcagctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcctgagtaactgggattacaggcacctgccactacacccagctaatttgtgtatttttagtagagacagtttttcaccatgttgcctaggttggtctcaaactcctgacctc--gtgatccgcccgcctcggcctctcaaagtgctgggattacaggcgtcagccaccgcacccagcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94172 308 - 111706 TCTAAtttg---ttttgttgttgtt---gttttgagacaggggctcgctctgtcg-ccaggctggagtgcagtgatccaatctctgctcacggcaacctccacttcccgggttcaagtgattctcctgcctcagcttcctgagtagttgggattccagccacatgccaccacacccagctaatttgtgtatttttagtagagacaggatttcaccatgttgcctaagttggtctcaaacttctggcctcaagtgatctgcccgccttcgcttctcaaagtgccgggattacgggcgtgagccaccgcacccagcc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192407465 308 - 192460366 TCTAAtttg---ttttgttgttgtt---gttttgagacaggggctcgctctgtcg-ccaggctggagtgcagtgatgcaatctctgctcagggcaacctccacttcccgggttcaagtgattctcctgcctcagcttcctgagtagttgggattacagccacatgccaccacacccagctaatttgtgtatttttagtagagataggatttcaccatgttgcctaagttggtctcaaacttctggcctcaagtgatctgcccgccttggcctctcaaagtgccgggattacaggcgtgagccaccgcaccctgcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187328714 308 + 187378091 tctaatttg---ttttgttgttgtt---gttttgagacaggggctcgctctgtcg-ccaggctggagtgcagtgacgcaatctcagctcacggcaacctccacttcctgagttcaagcgattctcctgcctcagcctcctgagtagttgggattacagccacatgccaccacgcccagctagtttgtgtatttttagtagagacaggatttcaccatgttgcctaagttggtctcaaacttctggcctcaaatgatccacccaccttggcctctcaaagtgctgggattacaggcgtgagccaccgcacccagcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91353700 308 + 91754291 CCTAAtttg---ttttgttgttgtt---gttttgagacaggggctcgctctgtcg-ccaggctggagtgcagtgacacaatctcagctcacagcaacctccacttcctgggttcaagcgattctcctgcctcagcctcctgagtagttgggattgcagccacatgccaccacgccctgctaatttgtgtatttttagtagagacaggatttcaccatgttgcctaagttggtctcaaacttctagcctcaagtgatccgcctgcctcggcctctcaaagtgctgggattacaggcgagagccaccgcacccagcc i chlSab2.chr15 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73833517 49 + 74750902 I e canFam3.chr33 2317384 0 - 31377067 C e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=293130.000000 s hg38.chr3_KI270937v1_alt 57159 164 + 165607 TCTAATTTGTGTATTCCATATTTTACAGATTTTTTAAGCTAGTCAAATTTTACAATTTTTTTACTTCCAAAAATAACAGTAATC-----------AGCATCATATGTACATGT-------------------------CCGTG---TCCTCATATGTA-GTAATTAAGATTACATGAGCCACTGTATTAAGTATCACCCACTTG s ponAbe2.chr3_random 181162 164 - 20583478 TCTAATTTGTGTATCCTATATTTTACAGATTTGTTAAACTAGTCAAATTTTACAATTTTTTTACTTCCAAAAATAACAGTAATC-----------AGCATTATATGTACATGT-------------------------CCGTG---TCCTCATATGTA-GTAATTAAGATTACATGAGCTACTGTATTAGGTATCACCCATTTG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845671 162 - 123690457 TCTAATTTGTGTATCCCATATTTTACAGATTTTTTAAGCTAGTCAAATTTTACAATTTTTTTACTTCCAAAAATAACAGTAATC-----------AGCACTATACGTACATGT---------------------------GTG---TCTTCATATGTA-GTAACTAAGATTACATGAGCCACTGTATTAGGTATCACCCATTTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94480 188 - 111706 TCTGATTTGTGTATCCCATATTTTACAGATTTTTAAAACTAGTCAAATTTTACA-TTTTTTTACTTCCAAAAATAACAATAATC-----------AACATTATATGTACATATATGTCATGTACATATATGTGTGTACATGTG---TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192407773 188 - 192460366 TCTGATTTGTGTATCCCATATTTTACAGATTTTTTAAACTAGTCAAATTTTACA-TTTTTTTACTTCCAAAAATAACAATAATC-----------AACATTATATGTACATATATGTCATGTACATATATGTGTGTACATGTG---TCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329022 189 + 187378091 tctgatTTGTGTATcccatattttacagattttttaaactagtcaaattttacactttttttacttccaaaaat---aataacc-----------agcattatatgtacataaatgtcatgtacatatatgtgtgtacatgtgtccTCCTCATATGTA-GTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354008 186 + 91754291 TCTGATTTGTGTATCCCATATTTTACAGATTTTTTAAACTAGTCAAAGTTTACACTTTTTTTACTTCCAAAAAT---AATAATC-----------AGCATTATATGTACATATATGTCATGTACATACATGTGTGTACATGTG---TCCTCATATGTA-CTAATTAATATTACATGAGCCCCTGTATTAGGTATCACCAATTTG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2317384 144 - 31377067 TCTAATTGGCATAGCCTATATTTTACAAA--------------------------ATTTTTGGCTTCCAATAAC---AGTAATCATGTTATTGGAAGCATTGCATGTACATAT---------------------------ATG---CCCTTATATGCATGTAATTAAAA-TAAATTATCCACTTTATCAGGTATCCTCGATTCA i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e calJac3.chr17 73833517 49 + 74750902 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=119190.000000 s hg38.chr3_KI270937v1_alt 57323 48 + 165607 AGGAAATACAAAGCAAGAGAAGAAAACCTATTTAAGAATTGGGTTTAT s ponAbe2.chr3_random 181326 48 - 20583478 AGGAGATACAAAACAAGAGGAGAAAACCTATTTAAGAATTGGGTTTAT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845833 48 - 123690457 AGGAAATACAAAGCAAGAGGAGAAAACCTATTTAAGAACTGGGTTTAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94668 48 - 111706 AGGAAGTACAAAGCAAGAGAAGAACAACTATTTAAGAATTGGGTTtat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192407961 48 - 192460366 AGGAAGTACAAAGCAAGAGAAGAACAACTATTTAAGAACTGGGTTTAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329211 48 + 187378091 AGGAAGTACAAAGCAAGAGAAGAACAACTATTTAAGAATTGGGTTTAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354194 48 + 91754291 AGGAAGTACAAAGCAAGAGAAGAACAACTATTTAAGAATTGGGTTTAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73833566 41 + 74750902 aaaaaaaacaaaacaaaacaaaaAC-------TAAGAATTGGGTTTAT i calJac3.chr17 I 49 C 0 s canFam3.chr33 2317528 48 - 31377067 AATAAATGCAAAGCAGGAAAAGAAAAACTACTTAAGAATAGGATTTAT i canFam3.chr33 C 0 I 416 e mm10.chr16 32782661 928 + 98207768 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=74146.000000 s hg38.chr3_KI270937v1_alt 57371 31 + 165607 ATAACAGTGGTG---TTgtcatttttgtaaactg s ponAbe2.chr3_random 181374 34 - 20583478 ATAACAGCGGTGTTATTGTCATTTTTGTAAACTG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845881 34 - 123690457 ATAACAGTGGTGttattgtcacttttgtaaactg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94716 34 - 111706 ataacagtggtgctgttgtcatttttgtcaactg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408009 34 - 192460366 ATAACAGTGGTGCTGTTgtcatttttgtcaactg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329259 34 + 187378091 ATAACAGTGGTGTTATTGTCATTTTTGTCAACTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354242 34 + 91754291 ATAACAGTGGTGttattgtcatttttgtcaactg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73833607 34 + 74750902 GTAACAGTGGTGTTATTGTCACTTTCGTAAACTG i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2317576 416 - 31377067 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=252965.000000 s hg38.chr3_KI270937v1_alt 57402 94 + 165607 ctctccattcatgccaaattatagagcagcttcggaacaattatatcattaaatTTACGTTTTGTGTGATTTCAGTACTGAATGCCCTTTTCTT s ponAbe2.chr3_random 181408 94 - 20583478 CTCTCCATTCATGCCTAACTACAGTGCAGCTTCAGAACAATGATATCATTAAATTTACATTTTGTGTGACTTCAATACCAAATGCCATTTTCTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2845915 91 - 123690457 ctctccattcatgcctaattatagtgcagcttcagaaca---atatcattaaatTTACATTTTGTGTGACTTCAATACCAAATGCCATTTTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 94750 94 - 111706 ctctccattcatgcctaattatagtgcagcttcagaacaattatatcattaaatTTACATTTTGTGTGACTTCAATACCGAATGCCATTTTCTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408043 94 - 192460366 ctctccattcatgcctaattatagtgcagcttcagaacaattatatcattaaatTTACATTTTGTGTGACTTCAATACCGAATGCCATTTTCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329293 94 + 187378091 CTCTCCATTCATGCCTAATTGTAGTGCAGCTTCAGAACAATTATAtcattaaatttacattttttgtgaCTTCAATACCGAATGCCATTTTCTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354276 94 + 91754291 ctctccattcatgcctaattataatgcagcttcagaacaatcatatcattaaatTTACATTTTGTGTGACTTCAATACCGAATGCCATTTTCTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73833641 94 + 74750902 CTCTTCATCCATCCCTAATTATAGTGCAGCTTCATAACAATTATATCATTACATTTACATTTTGTTTGACTTCAATACCAACTGCCATTTTCTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2317992 88 - 31377067 CAATCCATTCATGCCTAACTATAGTGTAGCTT------AATGATATCGTTAAATTAATATTTTGTTAGATTTCAATATTAAATACTATTTTCTC i canFam3.chr33 I 416 C 0 e mm10.chr16 32782661 928 + 98207768 I e panTro4.chr3_GL389630_random 32773 3019 - 103936 I a score=1181817.000000 s hg38.chr3_KI270937v1_alt 57496 369 + 165607 AACTTTCAGAGCCCA-----------CTG--AAAGTTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaatactaccggctgcttgtcctcgagcacgtacaatgtaacaaacttgtaaataaaataagcacattataatacagcatgttaagtgttacaacagaaacacaag-----agaccagaaaatcagcacctctgtagggaatctgatgaa----gtcatggagaggtgccatctgaactgggctttgaggaatgaataggagttttccaggtgaagggacca--------------------gggggaggaatcatgatgggcagacgctccagat s panTro4.chr3_GL389630_random 35792 374 - 103936 aactTTCAGAGCCCA-----------CTG--AAAGTTTCGGG-------GCTCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacgccagcttctgtgatgacagaggtgaataccaccggctgcttgtcctcgagcacgtacaatgtaacaaacttgtaaataaaataagcacattataatacagcatgttaagtgttacaatagaaacacaagtaaagagaccagaaaatcagcacctctgtagggaatctgatgaa----gtcatggagaggtgccatctgaactgggctttgaggaatgaataggagttttccaggtgaagggacca--------------------gggggaggaatcatgatgggcagacactccagat i panTro4.chr3_GL389630_random I 3019 C 0 s ponAbe2.chr3_random 181502 373 - 20583478 AACTTTTAGAGCCCA-----------CTG--AAAGTTTCGGG-------GATCACGTGGCCCACCATT-GTCCcagtcactcagcaaacacatcagtgccct-catgtggagggctccacactagcttctgtgatgacagaggtgaatactaccggctgcttgtcctagagcacatacaatgtaaaaaacttgtaaataaaataagcacattatagtacagcatgttaagtgttacaacagaaacacaagtaaagagaccagaaaatcagcacctctgtagggaatctgatgaa----gtcatggagaggtgccatctgaactaggctttgaggaatgaataggagttttccaggtgaagggacc---------------------gggggaggaatcatgataggcagaCACTCCAGAT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2846006 380 - 123690457 AACTTTCAGAGCTAAGAAAAAGTTAGCTG--AAAGTTTCGGGGCCATCTGCTCACGTGGCCCACCATG-GTCCCAGTCACTCAGCAAACACATCGTTGCCCT-GATGTGGAGGGCTCCACGCTAGCTTCTGTGATGACAGAGGT-----------GCTGCTTGTCCTAGAGCACGTACAATGTAacaaacttgtaaataaaataagcacattatagtacagcatgttaagtgttacaacagaaacacatgtaaagagaccagaaaatcagcacccctgcagggaatctgacgaa----gtcatggagaggtgccatctgaactgggctttcaggaatgaataggagttttccgggtgaagggacc---------------------gggggaagaatcatgatgtgcagacactccacat i nomLeu3.chr11 C 0 I 315 s rheMac3.chrUn_JH291127 94844 379 - 111706 AACTTTCAGAGCCCA-----------CTG--AAAGTTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCcagtcactctgcaaacacatcagtgccct-caggtggagggctccatgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaagagaccagaaaatcagcacctctgtagggaatctgacaaa----gtcatggagaggtgccacctgaactgggctttgaggaatgaata-gagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408137 380 - 192460366 AACTTTCAGAGCCCA-----------CTG--AAAGTTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactactgactgcttgtcctagagcacctacaatgtaacaaacttgtaaataaaataagcacattattgtacagcatgttaagtgttataacagaaacacaagtaaagagaccagaaaatcagcacctctgtagggaatctgacgaa----gtcatggagaggtgccacctgaactgggctttgaggaatgaataggagttttccaggcaaagggacc---------------------aggggaagaatcatgatgtgcagacactccagat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329387 380 + 187378091 AACTTTCAGAGCCCA-----------CTG--AAAGTTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACGCATCAGTGCCCT-CAGGTGGAGGGCTCCATGCTAGCTTCTGTGATGACAGAGGTGAATACTACTGACTGCTTGTCCTAGAGCACCTACAATGTAACAAActtgtaaataaaataagcacattATTGTACAGCATGTTAAGTGTTATAACAGAAACACAAGTAAAGAGACCAGAAAATCAGCACCTCTGTAGGGAATCTGACGAA----GTCATGGAGAGGTGCCACCTGAACTGGGCTTTGAGGAATGAATAGGAGTTTTCCAGGCAAAGGGACC---------------------AGGGGAAGAATCATGATGTGCAGACACTCCAGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354370 380 + 91754291 AACTTTCAGAGCCCA-----------CTG--AAAGTTTCAGGGCCATCTGCTTATGTGGCCCACCATT-GTCCCAGTCACTCTGCAAACACATCAGTGCCCT-CAGGTGGAGGGCTCCAtgctagcttctgtgatgacagaggtgaatactatcggctgcttgtcctagagcacctaaaatgtaacaaacttgtaaataaaataagcacattatagtacagcatgttatgtgttataacagaaacacaagtaaagagaccagaaaatcagcacctctgtagggaatctgacgaa----gtcatggagaggtgccacctgaactgggctttgaggaatgaataggagttttccaggcaaagggacc---------------------aggggaagaATCATGATGTGCAGACACTCCAGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73833735 362 + 74750902 AACTTTCAGAGCTCA-----------CTG--CAAGTTTTGGGGCCACCTGCTCACGTGGCCCGCCATTCGTCTCGGTCACTCAGCCAACACATCAGCGCCCT-CATGTGGAGGGCTCCATGCTAGCTTCTGTGAAGAC--TGGCGAAGACTGGCGGCTGCTTGTCCCA-------------GTAACAAACTTGTAAATAAAATAAGCACTTTATAATACAGCATGTTCCGAGTT-----AGAAACACAAGTAAAGAGATCAGGAAATCAGTGCCTCTGCAgggaatctgacaaa----gtcatggagaggtgccatctgaactgggctttgaggaatgaataggagttttccaaggggagggacaa--------------------gggggacgaatcacgatgggcagaaactccaaat i calJac3.chr17 C 0 C 0 s canFam3.chr33 2318080 396 - 31377067 ACCTTTCAGAGCCCA-----------GTGCCCATATTTCATGGTCACCTGCTCACGTGGCCCATC----CTCtcagttatgcagcgaacagctgagtatcctccaggtacagagctctgcactaggttctgtggctacagggaggagtaccgcatggcacctgtcctgaagcacagatgacttaaccaactcataagcgaatgaagcagg-----atgtagtatgttaagtgtcataacagaaaca----taaagggacgatgaaactagaccctcctcagggaatttgaggaaagccaccacaaggaggcaccgaatgaactgggcctctaagcatgaacagaagttttccagatggagggaccagagagcgggagagcatcctgggggcaagagtcatgatgtacaaactctctggat i canFam3.chr33 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I a score=699266.000000 s hg38.chr3_KI270937v1_alt 57865 218 + 165607 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaagcagcataggatatggaagatggggccgt--gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACGAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAGCTCTGCAGATGGTGTAAAAGGTAGGTTGGAGT s panTro4.chr3_GL389630_random 36166 218 - 103936 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaagcagcataggatatggaagatggggccgt--gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACGAAGGTGGGGATTCCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAAGCTCTGCAGATGGTGTAAAAGGTAGGTTGGAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 181875 218 - 20583478 GAAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTTCCTGTGCAAGCAGCATAGGATATGGAAGATGGGGCCGT--GACCTGGAGCTAAGATAGTTGGCTGAGGCCATATCATGAAGACCTTTGCATACCAAGGTGGGGATTTCATCCTGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGTAAAGCTCTGCAGATGGTGTAAAAGGTAGCTTGGAGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2846701 218 - 123690457 gaaagcaggtgtgcctggg-gttagcgagctgcttcctgtgcaaggagcataggatatggaagatggggtggc--gacctggagctaagatagttggctgaggccatatcatgaagACCCTTGCATACCAAGGTGGGGGTTTCATCCTGGAGATAGGAACAGGAGTGGCTTTGATTTGGGAGAGGAAAGCTCTGGAGATGGTGTAAAAGGTAGCTTGGAGT i nomLeu3.chr11 I 315 C 0 s rheMac3.chrUn_JH291127 95223 217 - 111706 ggaagcaggtgtgcctggg-gttagcgagctgctccctgtgcaaggagcacaggatatggaagatggggccac--gacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGGCTCT-GAGATGGTATAAAAGGTAGCTTGGAGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408517 217 - 192460366 ggaagcagatgtgcctggg-gttagcaagctgctccctgtgcaaggagcacaggatatggaagatggggccgc--gacctggagctaaggtagttggctgaggccgtatcatgaagACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAACAGGAGTAGCTTTGATTTGGGAGAGGAAGGCTCT-GAGATGGTATAAAAGGTAGCTTGGAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329767 214 + 187378091 GGAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTCTCTGTGCAAGGAGCACAGGATATGGAAGATGGGGCCGC--GACCTGGAGCTAAGGTAGTTGGCTGAGGCCGTATCATGAAGACCCTTGCATACCGAGGTGGGGATTTCATCCCGGAGGTAGGAATAGGAGTAGCTTTGATTTGGGAGAGGAAGGCTCTGGAGATGGTATAAAAgg----ttagagt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354750 214 + 91754291 GGAAGCAGGTGTGCCTGGG-GTTAGCGAGCTGCTCCCTGTGCAAGGAGCACAGGATATGGAAGATGGGGCCGC--GACCTGGAGCTAAGGTAGTTGGCTGAGGCCGTATCATGAAGACCCTTGCATACCAAGGTGGGGATTTCATCCCGGAGGTAGGAATAGGAGTAGCTTTGATTTGGGAGAGGAAAGCTCTGGAGATGGTATAAAAGG----TTAGAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73834097 220 + 74750902 gaaagcaggtgtgcctggg-gttggcgaggtgccccctgtggaaggagcatagaatctggaagatggggtcacagaacctggaactaaggaagttggctgaggccaaatcttgaagGCCCTTGCACACCAAGGTGGGGATTTCATCCTGGAGGTGGGAAGAGGAGTAGCTTTGATTTGGGAGAGAAAAGCTCTAGAGATAGTGTAAAAGGCAGCTTGGAGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2318476 205 - 31377067 caaagcaggtatgacagggaagtagtgagaagttacctgtggaagtaacataAGACATAGCAGGCGGGTCTACGAGACACAGAGCTGG-----------GAACCCTGATCACGAGGACCCTGATATACAAGGCTGGGAGTTTTGTTCCTTTGGTAGGAACAGGACTAGC-----TTTTGGAAAGGGAGCCCTTAAAGACAGTGTGAAAGGTACTTGGGAac i canFam3.chr33 C 0 I 36 e mm10.chr16 32782661 928 + 98207768 I a score=325604.000000 s hg38.chr3_KI270937v1_alt 58083 132 + 165607 T-AAAAAAATTTTTTTTAAGTTCCATTTTAAGAAAA-AAGA--AGATAAAATAACATTTCATGAATTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACGCTATAGTGT s panTro4.chr3_GL389630_random 36384 134 - 103936 T-AAAAAAAATTTTTTTAAGTTCCATTTTAAGAAAA-AAGAGAAGATAAAATAACATTTCATGAACTTTTTTCTGTCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGCGTAAAATAACACTATAGTGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 182093 132 - 20583478 T-AAAAAAAATTTTTTTAAGTTCCATTTTAAGAAAA-AAGA--AGATAAAAGAACATTTCATGAACTTTTTTCCATCCTAATAAATATATGTTTCAACAATGCTTCTGTAGCTTGTGTAAAATAACACTACAGTGT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2846919 134 - 123690457 T-AAAAAAAA-ATTTTAAAGTTTGATTTtaagaaaataagagaagataaaataatatTTCATGAACTTTTTTCCATCCTAATAAATATATGTTTCAACAACGCTTCTGTAGCTTGCGTAAAATAACACTACAGTGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95440 130 - 111706 T--AAAAAAAATTTTTTTAGTTCCACTTTTAGAAAATAAGAGAAGATAAAATAATATTTCATGAACTTTTTTCCATCTT----AATACATGTTTCAACAACGCTTCTGTAGCTTGCAAAAAATAACACTATAGTGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408734 130 - 192460366 T--AAAAAAATTTTTTTTAGTTCCACTTTTAGAAAATAAGAGAAGATAAAATAATATTTCATGAACTTTTTTCCATCTT----AATACATGTTTCAACAACGCTTCTGTAGCTTGCAAAAAATAACACTATAGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187329981 135 + 187378091 t-aaaaaaaaatttttttagttccatttttagaaaataagagaagataaaataatatttcatgaacTTTTTTCCAtcttaataaatacatgtttcaACAACGCTTCTGTAGCTTACAAAAAATAACACTATAGTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91354964 136 + 91754291 TAAAAAAAAAATTTTTTTAGTTCCATTTTTAGAAAATAAGAGAAGATAAAATAATATTTCATGAACTTTTTTCCATCTTAATAAATACATGTTTAAACAACGCTTCTGTAGCTTACAAAAAATAACACTATAGTGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73834317 128 + 74750902 T-TAAAAAAA---TGTTAAGTTCCGTTTTAAGAAAATAAGAGAAGATAAAATAATATTTCATGAACTTCTCTCCATCTTAATAAATAC--GTTTCAACAAAACTTC--TAGATTATGCAAAGTAACACTACAATGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32782661 928 + 98207768 I e canFam3.chr33 2318681 36 - 31377067 I a score=1581925.000000 s hg38.chr3_KI270937v1_alt 58215 552 + 165607 TTAAGCAAACTGTTACATGGGGAGATTTGAGGTTACTTGTGTTTTGTTTTGCCTTTTTCATCT--------------------ATGAGTTATTGTAAACAGT-----------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt---aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaaggttgtaccaatttcttccctactaggagtgtttaagaatgcccgtttgcccagcacc--cagtatag--------------atcag--------tac-agacatacaataagcaatatctcactgtattaatggacctgtttttgc-tactgaagtcacacgttctttttcat------ggggggtggtggcgggaggagaggacatttgtatttcttcttttgtgaatt------------------------------------------------acctgttgc--------------------------------------------------------------cattta---cccatttttctactggtatgtttgcc--------tttttattttcttgcgctgtaagagttctctatat----------------------------------------attaagggcatcctgttgttgctatatgcggtgtaaataagttctttcaACTTA-TTATTGCTGTACGTGT-------------CTAACTTCAATC s panTro4.chr3_GL389630_random 36518 552 - 103936 TTAAGCAAACTGTTACATGGGAAGATTTGAGGTTACTTGTGTTTTGTTTTGCCTTTTTCATCT--------------------ATGAGTTATTGTAAACAGT-----------------------------TAGGCACAGATTCTAAattacttccttaagataaatcagt---aacgaaactgctgagttaaaggtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaagattgtaccaatttcttccctactaggagtgtttaagaatgcccatttgcccagcacc--cagtatag--------------atcag--------tac-agacatacaataagcaatatctcactgtattaatggacctgtttttgc-tactgaagtcacacgttctttttcat------ggggggtggtggcaggaggagaggacatttgtatttcttcttttgtgaatt------------------------------------------------acctgttgc--------------------------------------------------------------cattta---cccatttttctactggtatgtttgcc--------tttttattttcttgcgctgtaagagttctctatat----------------------------------------attaagggcatcctgttgttgctatatgcagtgtaaataagttctttcaACTTA-TTATTGCTGTACGTGT-------------CTAACTTCAATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 182225 555 - 20583478 TTAAGCAAACTGTTACATGGGGAGATTTGAGGTTATTTGTGTTTCGTTTTGCCTTTTTCATCT--------------------ATTAGTTGTTGTAAACAGT-----------------------------TAGgcacagattcttaattacttccttaagataaatcagt---aatgaaactgctgagttaaagatatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaaggttgtaccaatttcttccctactaggagtgtttaagaatgcccgtttgcccagcacc--aagtatag--------------atcag--------tac-agacatacaataagcaatatctcactgtattaatggacctgtttttgc-tactgaagtcacacgttctttttcat-----gggggggtggtggcgggagaagaggacatttgtatttcttcttttgtgaatt------------------------------------------------acctgttgc--------------------------------------------------------------cattta---cccatttttctactggtgtgtttgcc------ttttttttttttcttaccctgtaagaattctctatac----------------------------------------attaagagcatcctgttgttgctatgtgtggtgtaaataagttctttcaACTTA-TTATTGCTGTACATGT-------------CTAACTTCAATC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2847053 546 - 123690457 TTAAGCAAACTGTTACTTGGGGAGATTTGAGGTTATTTGTGTTTTGTTATGTCTTTTTCATCT--------------------ATTAGTTGTTATAAAC---------------------------------AGgcacagattcttaattacttcctt-agataaatcagt---aacgaaactgctgagttaaaagtatgtacatttttcgggctttaaataaatcagttaaattgtcctccggaaaggctgtaccaatttctttcctactaggagtgtttaagaatgcccatttgcccagcgcc--cagcatag--------------atcag--------tac-agacatacaataagcaatatctcactgtattaatgggcctgtttttgc-tactgaagtcacacgttctttttcat------ggggggtggtggtgggaggagaggacatttgtatttcttcttttgtgaatt------------------------------------------------acctgttgc--------------------------------------------------------------cattta---tccatttttctactggtgtgtttgcc--------ttttt-ttttcttgctctgtaagagttctctgtat----------------------------------------attaagggcatcctgttgtcgctatgtgcggtgtaaataagttctttcaACTTA-TTATTGCTGTACATGT-------------CTAACTTCAATC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 95570 558 - 111706 GTAAGCAAACTGTTACATAGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTCTTTTTCATCT--------------------ATTAGTTGTTATAAA-AAT-----------------------------TAGGCACGGattcttaattacttccttaagataaatcagt---cacgaaactgctgagttaaa-gtgtgtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaatttctttcctcctaggagtgtttgagaacgcccgtttgcccagcacc--cagtacgg--------------atcag--------tac-agacatgcaacaagcaatttctcactgtattaatggacctgtttttgt-tagtgaaatcacacgttctttttcat----tgcgggagtggtggtgggaggagaggacatttgtatttcctcttttgtgaact------------------------------------------------acctgttgc--------------------------------------------------------------ccttta---tccatttttctactggtgtgttcgcc-tttttttttttttttttcttgctctgtaagagttctctatat-----------------------------------------ttaagtgcatcctgttgttgctatatgtggtataaataagttctttcaattta-tTATTTCTGTACATGT-------------CTAACTTCGATC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192408864 556 - 192460366 GTAAGCAAACTGTTACATAGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTCTTTTTCATCT--------------------ATTAGTTGTTATAAA-AAT-----------------------------TAGGCACGGattcttaattacttccttaagataaatcagt---cacgaaactgctgagttaaa-gtgtgtacatttttcaggctttaaataaatcagttaaattgtcctccagaaaggctgtaccaatttctttcctcctaggagtgtttgagaacgcccgtttgcccagcacc--cAGTACGG--------------ATCAG--------TAC-AGACATGCAACAAGCAATTTCTCACTGTATTAATGGACCTGTTTTTGT-TAGTGAAATCACACGTTCTTTTTCAT----TGCGGGGGTGGTGGTGGGAGGAGAggacatttgtatttcttcttttgtgaact------------------------------------------------acctgttgc--------------------------------------------------------------ccttta---tccatttttctactggtgtgttcgcc---tttttttttttttttcttgctctgtaagagttctctatat-----------------------------------------ttaagtgcatcctgttgttgctatatgcggtataaataagttctttcaattta-tTATTTCTGTACATGT-------------CTAACTTCGATC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187330116 579 + 187378091 TTAAGCAAACTGTTACATGGGGAGATTTTAGGttatttgtgtttcattttgtctttttcatctaAATTGATGAAAACGATTTCATCTATTGTTATAAA-AAT-----------------------------TAGGCACAGAttcttaattacttccttaagATAAATCAGT---CACGAAACTGCTGAGTTACA-GTAGGTACATTTTTCAGGCTTTAAATAAATCAGTTAAATTGTCCTCCAGAAAGGCTGTACCAATTTCTTTCCTCCTAGGAGTGTTTGAGAATGCCCGTTTGCCCAGCACC--CGGTACGG--------------ATCAG--------TAC-AGACATACAATAAGCAATTTCTCACTGTATTAATGGACCTGTTTTTGT-TAGTGAAATCACACGTTCTTTTTCACTGGGTGGGGAGGCGGTGGCGGGAGGAGAggacatttgtatttcttcttttgtgaatt------------------------------------------------acCTGTTGC--------------------------------------------------------------CCTTTA---TCCATTTTTCCACTGGtgtgtttgcc----ttttttttttttttcttactctgtaAGAGTTCTCTATAT-----------------------------------------TTAAGTGCATCCCGTTGTTGCTATATGCGGTATAAATAAGTTCTTTCAATGTA-TTATTTCTGTACATGT-------------CTAACTTCAATC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91355100 559 + 91754291 TTAAGCAAACTGTTACATGGGGAGATTTTAGGTTATTTGTGTTTCATTTTGTCTTTTTCATCT--------------------ATTAGTTGTTATAAA-AAT-----------------------------TAGgcacagattcttaattacttccttaagataaatcagt---cacgaaactgctgagttaaa-gtatgtacatttttcaggctttaaataaatcggttaaattgtcctccagagaggctgtgccaatttctttcctcctaggagtgtttgagaatgcccgtttgcccagcacc--cAGTACGG--------------ATCAG--------TAC-AGACAAGCAACAAGCAATTTCTCACTGTATTAATGGACCTGTTTTTGT-TAGTGAAATCACACGTTCTTTTTCAC----TGGGGGGGTGGTGGCGGGAGGAGAggacatttgcccctttccttttgtgaatt------------------------------------------------acctgttgc--------------------------------------------------------------ccttta---tccatttttccactggtgtttttgccttttttttttttttttttcttactctgtaagagttctctatat-----------------------------------------ttaagTGCATCCCGTTGTTGCTATATGCGGTATAAATAAGTTCTTTCAATTTA-TTATTTCTGTACATGT-------------CTAACTTCAATC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73834445 576 + 74750902 TTAACCAAAGTGTCACGC-GGGAGATTTTAGGTTATTTGTGTTTCGTTTTGTCTTTTTCATCT--------------------ATTGGTTGTTATAAA---------------------------------CAGGCACAGATGCTtaatta-ttccttaaggtaaaccact---aatgaaactgctgaattaaaggtatgtacatttttcaggctttaaatgaatgagttaaattgtcctccagaaaggctgcaccaatttcattcccactaggagtgtctgag-atgccccttcgcccagcacc--cagcatag--------------atcgg--------tacgagacgcacggtaagcactatctcactgtattaattgacctgtttctgc----tgaagtcaaaccttctttctcac-----ggtggggtggtggcgggaggagaggacgcttgtgtttcttcttttgtgaact------------------------------------------------gcctgctgc--------------------------------------------------------------aattta---ttcatttttctgctggtgtgtctgcc-----------ttttttccctgctctctaagagttctctgtatagtaaaggcatCCTGTTGTTGCTCTAAGAGTTCTCTGTATATTAAAGGCATCCTGTTGTTGCTCTGTGAGGTGTAAGTCA---CTTTCAGTTTG-TTATTTCTGCAC--GT-------------CTAACTTTAATC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2318717 683 - 31377067 TTAACCAAATGACTACACTGAgacattt-----------tgttttgtct----tttttccttt--------------------attagctgttataaacagttctgtaatgaatacattgatttattggtctttgcacagattcctaattatttctttaagataaaccctttggaatgaaattgctcagttaaagggatgcacatttttaagtctttagat-----agtcaaatggtcctcccgaaaggctgtgccgatttcattcacaccaacagtgtttaagactatcctttccctccacaccctcatcatggaaattataatttttataagtccttacctat-tggcacatagttag-aatacctcactgtatcaatttactttttttttcctactgg--------tttctttttcat-------------------------ggaaaacatttatattcctgcttttgtgttttgttttgttttgttttgtttttttgccttgcacatcttttatttctcAAATCTGTGGTGTGGGGTTCATCTGAACACAGCTCTTACCCAAAAAGGAAGAtatattcctgcttttggaaaacatttatagtcctactttcctctggcatatttccc-------------tttttattgctttgtaagaactctttgtat----------------------------------------attaaggagattctggttttgccatatatggtgtaaataagttcttttggtttgttttttTCTGTATATGTCCACCCTCCCCTACTAAGTTTAGCC i canFam3.chr33 I 36 C 0 e mm10.chr16 32782661 928 + 98207768 I a score=1105218.000000 s hg38.chr3_KI270937v1_alt 58767 333 + 165607 CCTG-GGAGAAGAGACAGATTTGAAT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGCGGCAGCTGCCC----------------------------------------------------------------AACATATATGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCGAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCTGTCAAACGTTCAGA----------CTCCCCTTGCTC------ACAGCAGC-ATCAACATTGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactagggaaaccataatgggcaaaatctttcattctagttggaggactcagataataaaga s panTro4.chr3_GL389630_random 37070 333 - 103936 CCTG-GGAGAAGAGACAGATTTGAAT---CCTCCATGGCACATAGCTCAGTCTCTCTTCTGCGGCAGCTGCCC----------------------------------------------------------------AACATATATGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGTTCAGA----------CTCCCCTTGCTC------ACAGCAGC-ATCAACATTGTCTCCTTGTTTCCttcattcatctaaca------------------------------------------------aatattt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactagggaaaccataatgggcaaaatctttcattctagttggaggactcagataataaaga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 182780 339 - 20583478 CCTG-GGAGCAGAGACAGATTTGAAT---CCTCCACGGCACATAGCTCAGTCTCTTTTCTGTAGCAGGTGCTC----------------------------------------------------------------AACACATATGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCAGGCTACTTTATGAAACTCATT-CCGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGTTCAGA----------CTCCCCGTGCTCACAGCAACAGCAAC-ATCAACATTGTCTCCTTGTTTCCtccattcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttgttggcactagggaaagcgtaatgggcaaaatctttcattctagttgggggactcagataataaaga i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2847599 333 - 123690457 CCTG-GGAGAAGAGACAGATTTGAAT---CCTCCACGGCACATAGCTCAGTCTCTCTTCTGTGGCAGGTGCTC----------------------------------------------------------------AACATATATGCC----AAG---------------------ATGGG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGTTCAGA----------CTCCCCTTGCTC------ACAGCAAT-ATCAACACTGTCTCCTTGTTTCCttcactcatctaaca------------------------------------------------aatgttt--------------------------actgagcc---cctggtatgtgccaggtac------tgttcttggcactaggaaaaccataatgggcaaaatctttcattctagttgggggacacagataataatga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96128 333 - 111706 CCTG-GGAGAAGAGACAGGTTTGAAT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTC----------------------------------------------------------------AACATATTTGCC----AAG---------------------ATGAG----CGAATTATTTTTGTTCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGCTCACA----------CTCCCCTTGCTC------ACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactagggaaaccgtaaagggcaaaacctttcattctagttgggggacacagataataaaga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192409420 333 - 192460366 CCTG-GGAGAAGAGACAGGTTTGAAT---CCTCCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTC----------------------------------------------------------------AACATATTTGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCAAGCTACTTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGCTCACA----------CTCCCCTTGCTC------ACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactagggaaaccgtaaagggcaaaacctttcattctagttgggggacacagataataaaga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187330695 333 + 187378091 CCTG-GGAGAAGAGACAGGTTTGAAT---CCTTCACGGCACGTAGCTCAGTCTATCTTCTGAGGCAGGTGCTC----------------------------------------------------------------AACATATTTGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCAAGCTACCTTATGAAACTCATT-CTGCCTCACTCCAGAAATGGAAGGG-ATCCGTCAAACGCTCACA----------CTCCCCTTGCTC------ACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCTTCATTCATCTAACG------------------------------------------------AATGTTT--------------------------ACTGAGCC---CCCggcatgtgccaggtac------tgttcttgGCACTAGGGAAACCGTAAAGGGCAAAACCTTTCATTCTAGTTGGGGGACacagataataaaga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91355659 333 + 91754291 CCTG-GGAGAAGAGACAGGTTTGAAT---CCTCCACGGTACGTAGCTCCGTCTATCTTCTGAGGCAGGTGCTC----------------------------------------------------------------AACATATTTGCC----AAG---------------------ATGAG----CGAATTATTTTTGTCCAAGCTACCTTATGAAACTCATT-CTGCCCCACTCCAGAAATGGAAGGG-ATCCGTCAAACGCTCACA----------CTCCCCTTGCTC------ACAGCAAT-GTCAACGTTGTCTCCTTGTTTCCttcattcatctaacg------------------------------------------------aatgttt--------------------------actgagcc---cccggcatgtgccaggtac------tgttcttggcactagggaaactgtaaagggcaaaatctttcattctagttgggggacacagataataaaga i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73835021 324 + 74750902 CCTG-GGAGAAGAAACAGATTTGAAT---CCTCCATGGCACACAGCTCAGTCTCTCTTCTGCGGCAGGTACTC----------------------------------------------------------------AACAGATGTGCC----AAG---------------------ATGAG----TGGGTTATTTTTGTCCAAGCTACTTTATGAAACCCATT-CTGCCCTACTCCAGAAAT-GAAGGG-ACCAGTCGAACATTCACA----------CTCCCCTTGCTC------ACAGCAAT-GTCAATGTTGTCTCCTTG-TTCTttcattcatccaaca------------------------------------------------aatgttt--------------------------cctgagcc---cctgatatgtgccaggtgc------cattctgggcacgagggttaccataatgggcaaaatctttcattgtagttgagggactcagata------- i calJac3.chr17 C 0 C 0 s mm10.chr16 32783589 511 + 98207768 ccca-ggacctgAGACATCTTTGAAT---GTTCTTCAGCATACAGCATGGTCTCTCTTCTGTTTAAGGCACTCACCAACCACACCAAacacacacaccaaacacacacaccaaataccacaccaaacacacacaccaaacacacacacC----AAATACCACACCAAACACACCATCATAAGAGTTTGAATCATTTGC-----AACCACTCTATGAAGCTCATTCCTGCCCCACACCGAGAACACAAGGACGTCAGCTGAGAGCACACACAAACACCCCCCCCCCTTATTC------AGAGCAAC-CACAGAGCCATCT-GTTGTTTTTATTAACTACTTAACATACTCATGGAGCAGCTTGGTCAttatttcaatgccgggaattaaaaccagtgttttgttcctgctgagaaattgctccaagactgagctacaaccacaacACACAAAGTACTGACTATGTGCAAGGAGCTAGGGACATCACAATAGGCAAAGGATATGATTATAGTTGAAGGACTCTGGTGATAAAGA i mm10.chr16 I 928 I 96 s canFam3.chr33 2319400 337 - 31377067 CCTGTGGGGAAGAGACATCAGCGAATAACCCCCCATGGCACACACCAT-GCCTCTCTTCTGTTGCAGG-GCCT----------------------------------------------------------------GGCAAAAATGCTGGGAAGG---------------------ATGAT----TGAATTATTTTTGTCCAACCTACTTTATAAACCTCACC-CTGCCTCATCATGCAAGGGGGAGGGGATCAGCTGAATACACGTA----------CTGCCCTTATGC------ACAGCAATAGTCGAAGTTGTCT---GGTTTCCtccactcatttaact------------------------------------------------aatattt--------------------------accgagca---cctttcatgcggcaggcac------tgtgcgggacgctaggga-gccggagtgagcgaacgctcacattccagttgagggagacggataataagac i canFam3.chr33 C 0 C 0 a score=120865.000000 s hg38.chr3_KI270937v1_alt 59100 36 + 165607 aaac----aaaatatgtatgacgttcaattgtgatcagca s panTro4.chr3_GL389630_random 37403 40 - 103936 aaacaaataaaatatgtatgatgttcaattgtgatcagca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183119 40 - 20583478 aaacaaataagatacgtatgatgttcaattgtgatgagcg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2847932 40 - 123690457 aaatgaataaaatacgtatgatgttcaattgtgatcagcg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96461 40 - 111706 aaacaaataaaatacgtatgatgttcaactgtgatcagca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192409753 40 - 192460366 aaacaaataaaatacgtatgatgttcaactgtgatcagca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331028 40 + 187378091 aaacaaataaaatacgtATGATGTTCAATTGTGATCAGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91355992 40 + 91754291 aaacaaataaaatatgtatgatgttcaattgtgatcagca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73835345 29 + 74750902 -----------atatgtatgatgttccatcgtgatcagcg i calJac3.chr17 C 0 C 0 s canFam3.chr33 2319737 40 - 31377067 aaatacataaaatatgtattatgttaggttggaatcagca i canFam3.chr33 C 0 C 0 e mm10.chr16 32784100 96 + 98207768 I a score=107542.000000 s hg38.chr3_KI270937v1_alt 59136 33 + 165607 ctataaagtacgtcaaagtacagaaggggagac s panTro4.chr3_GL389630_random 37443 33 - 103936 ctataaagtacgtcaaagtatagaaggggagac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183159 33 - 20583478 ctatgaagtacatcaaagtacagaagcggagac i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2847972 33 - 123690457 ctataaagtacatcaaagtacagatggggagac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96501 33 - 111706 ctgtaaagtacatcaaagtacagaaggggagac i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192409793 33 - 192460366 ctgtaaagtacatcaaagtacagaaggggagac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331068 33 + 187378091 CTGTAAAGTACATCAAAGTACAGAAGGGGAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356032 33 + 91754291 ctgtaaagtacatcaaagtacagaaggggagac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73835374 33 + 74750902 ctataatgtacatcaaaatacagaaggggaggc i calJac3.chr17 C 0 I 1651 s mm10.chr16 32784196 33 + 98207768 ctacagagtgagttctaggacagccagggctac i mm10.chr16 I 96 I 54 s canFam3.chr33 2319777 27 - 31377067 ttaagaagaaaatcaaagcagaggagg------ i canFam3.chr33 C 0 C 0 a score=529680.000000 s hg38.chr3_KI270937v1_alt 59169 223 + 165607 tg--aatttgtaggcagcat-----ggtcat----ggtagacctcgctgagaaggggcatga--aggtggaggtagagggtttagacaagtggatatgtagaggagaaggcttctgagcagactaagcaatgcacagaaaggtcccaagg--caa-----gagcaggcccagcgcattcaagggacaagaaagacgtccg---tgtggctgcggtgcagtcagcaaattaaggaggcag-gggaggg s panTro4.chr3_GL389630_random 37476 223 - 103936 tg--aatttgtaggcagcat-----ggtcat----ggtagacctcacagagaaggggcatga--aggtggaggtagagggtttagacaagtggatatgtagaggagaagccttctgagcagactaagccatgcacagaaaggtcccaagg--caa-----gagcaggcccagcgcattcaagagacaagaaagacgtccg---tgtggctgcggttcagtgagcaaattaaggaggcag-gggaggg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183192 223 - 20583478 tg--aatttgtaggcaacac-----agtcat----cgtagacctcgctgagaaggggcgtga--aggtggaggtagagggtttagacgagtggatatgtagaggagaaggcttctgagcagacgaagcaatgcacagaaaggtcctaagg--caa-----gagcaggcccagtgcattcaagggacaagaaagacatccg---tgtggctgcagtgcagtgagcaaattaaggaggcag-gggaggg i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848005 223 - 123690457 tg--aatttgtaggcagcat-----ggtcat----ggtagaactcgctgagaaggggcgtga--aggtggaggtagagggtttagacaagtggataggtggaggagaaggcttctgagcagactaagcaacgcacagaaagggcccaagg--caa-----gagcaggcccactgcatttaagggacaagaaagacgtccg---tgtggctgcagtgcagtgagcaaattcaggaggcag-gggaggg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96534 206 - 111706 tg--aatttttaagcagcat-----ggtcat----ggcagaccttgctgagaagggacgtga--aggtggaggtagaggg-ttagccaagtggatatgcagaggag---------gagcagactgagcaatgcacagaaaggtcccaagg--caa-----gagcaggcccagtgcattcaagggacaagaaagacgtcag---tgtggctgtggt-------gcaaattaaggaggcag-gggaggg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192409826 206 - 192460366 tg--aatttttaagcagcat-----ggtcat----ggcagaccttgctgagaagggacgtga--aggtggaggtagaggg-ttagccaagtggatatgcagaggag---------gagcagactgagcaatgcacagaaaggtcccaagg--caa-----gagcaggcccagtgcattcaagggacaagaaagacgtcag---tgtggctgtggt-------gcaaattaaggaggcag-gggaggg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331101 217 + 187378091 TG--AATTTGTAAGCAGCAT-----GGTCAC----GGCAGACCTCGCTGAGAAGGGACGTAA--AGGTGGAGGTAGAGGG-TTAGCCAAGTGGATATGCAGAGGAGGAGGCTCCTGAGCAGACTGAGCAACGCACAGAAAGGTCCCAAGG--CAA-----GAGCAGGCCCAGTGCATTCAAGGGACAAGAAAGAC----G---TGTGGCTGTGGTGCAGTGAGCAAAttaaggaggca--gggaggg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356065 214 + 91754291 tg--aatttttaagcagcat-----ggtcat----ggcagacctcgctgagaagggacgtga--aggtggaggtagaggg-ttagccaagtggatatgcagaggagaaggctcctgagcagactgagcaacgcacagaaaggtcccaagg--caa-----gagcaggcccagtgcattcaagggacaagaaagatgtcag---tgtggctgtggt-------gcaaattaaggaggca--gggaggg i chlSab2.chr15 C 0 C 0 s mm10.chr16 32784283 242 + 98207768 TGGCAGTCGGTATGTAGCGTGAAAAGGGCATTGTGGGTAGAGTATAttgaggaggggcagaaggaggtggagagggagga-ggcattgagcagatgtctggaggagaggccttctaagcagacagaacaatacacacaaaggccccaaggcccaagacctgagcagatctggcacatcccaggaacagccaagttccttgctttgcggct----tacaaagagcaggctagagaggcggctacagca i mm10.chr16 I 54 C 0 s canFam3.chr33 2319804 176 - 31377067 -------------------t-----ggTC------GGGTGGCCCCACCGAGAGGGGG-AAGG--AGGTGGAGCTG------TTGGTCAGGTCGGTATCTGCAGGAGAAGGCCTCTGAGCAAACTGAGCAGTGCAT--------------G--CGA----------GGCCTGATGGGTTCCCGGGCGCCGAGAG--GTCAG---CGTCCCTGCAGTGAAGTGAGCAAGTTCAGGGGGCGG-GGGGGGG i canFam3.chr33 C 0 I 318 e calJac3.chr17 73835407 1651 + 74750902 I a score=319419.000000 s hg38.chr3_KI270937v1_alt 59392 124 + 165607 gcgcaggtcgtgca-cggctttgca-gctgttgtcgga-----gcttttcttctgagtgaaatgggaggat-tggagcaaagaagtggtgtgttctgccttatgttgtaaaaagacagccctggctgacaca s panTro4.chr3_GL389630_random 37699 124 - 103936 gcgcaggtcgtgca-cggctttgca-gctgttgtcaga-----gtttttctcctgagtgaaatgggaggat-tggagcaaagaagtggtgtggtctgccttacgttgtaaaaagacagccctggctgacaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183415 127 - 20583478 gcgcaggtcgtgca-cggctttgca-gctgttgtcagaactctgcttttcttctgagtgaaatgggaggat-tggagcaaagaagtggtgtggtctgccttatgttgtgaaaagacagccctggctg--aca i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848228 129 - 123690457 gcgcaggtcgtgca-tggctttgca-accgttgtcagaactctgcttttcttctgagtgaaatgggaggat-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagcccttgctgacaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96740 129 - 111706 gtgcaggttctgta-tggctttgta-gccgttgtcagaactctgcttttcttctaagtgaaatgggaggat-tggagcaaggaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacata i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410032 129 - 192460366 gcgcaggttctgta-tggctttgta-gccgttgtcagaactctgcttttcttctaagtgaaatgggaggat-tggagcaaggaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331318 129 + 187378091 gcgcAGGTCCTGTA-TGGCTTTGCA-GCCGTTGTCAGAACTCTGCTTTTCTTCTGAGTGAAATGGGAGGAT-TGGAGCAAAGAAGTGGTGTGGTCTGCCTTATGTTGTAAAAAGACAGCCCTGGCTGACACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356279 129 + 91754291 gcgcaggtcctgta-tggctttgca-gccgttgtcagaactctacttttcttctgagtgaaatgggaggat-tggagcaaagaagtggtgtggtctgccttatgttgtaaaaagacagccctggctgacaca i chlSab2.chr15 C 0 C 0 s mm10.chr16 32784525 122 + 98207768 gtacccattattcacctgttctacaggctgttgcccaaacttggcttttcctctgaatgaaacggaagagtatgaagcaca----------ggcctgccacatgctaggaagagaaatttccagctaacatc i mm10.chr16 C 0 C 0 e calJac3.chr17 73835407 1651 + 74750902 I e canFam3.chr33 2319980 318 - 31377067 I a score=254124.000000 s hg38.chr3_KI270937v1_alt 59516 92 + 165607 ctgggactagact-ggg-----gtgggggctgagctggaaacagggagacctg-------tagtagtgcaggtgagagatgatggcatcgtggaccatctcggtg-- s panTro4.chr3_GL389630_random 37823 93 - 103936 ctgggactagactgggg-----gtgggggctgagctggaaacagggagacctg-------tagtagtgcaggtgagagatgatggcatcgtggaccaTCTCGGTG-- i panTro4.chr3_GL389630_random C 0 T 2788 s ponAbe2.chr3_random 183542 92 - 20583478 ctgggactagact-ggg-----gtgggggctgagctggaaacagggagacctg-------tagtagtgcaggtgagagatgatgatgtcgtggaccatctcggtg-- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848357 92 - 123690457 ttgggactagact-ggg-----gtgggggcagagctggaaacagggagacctg-------tagtagtgcaggtgagagatgatggcatcgtggaccatctcggtg-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96869 92 - 111706 ttgggactagact-ggg-----gtgggggcagagctggaaacaggaagacccg-------tagtagtgcaggtgagagatgacggcatcgtggaccatcttggtg-- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410161 92 - 192460366 ttgggactagact-ggg-----gtgggggcagagctggaaacaggaagacccg-------tagtagtgcaggtgagagatgacggcatcgtggaccatcttggtg-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331447 92 + 187378091 TTGGAACTagact-ggg-----gtgggggcagagctgGAAACAGGAAGACCCG-------TAGTAGTGCAGGTGAGAGATGACGGCATCATGGACCATCTTGGTG-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356408 92 + 91754291 ttggaactagact-ggg-----gtgggggcagagctggaaacaggaagacctg-------tagtagtgcaggttagagatgacggcatcgtggaccatcttgttg-- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32784647 93 + 98207768 cggggatgagagc-gggtgttcaggtgggcacaggtaccaacagggag-tctg-------tagtcat---ggtgagagacagtagcatctcagcccacctgagtg-- i mm10.chr16 C 0 C 0 s canFam3.chr33 2320298 97 - 31377067 CTGGGACGACACC-GGG----CGTgggggcaaaggtggaaagagagagccgcgagggtatcaggaatccaggagagggacggtggcagctggg-----cttggaggg i canFam3.chr33 I 318 C 0 e calJac3.chr17 73835407 1651 + 74750902 I a score=32831.000000 s hg38.chr3_KI270937v1_alt 59608 13 + 165607 gtagcactggaga s ponAbe2.chr3_random 183634 13 - 20583478 gtagcactggaga i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848449 13 - 123690457 gtagcactggaga i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96961 13 - 111706 gtagcactggaga i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410253 13 - 192460366 gtagcactggaga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331539 13 + 187378091 GTAGCACTGGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356500 13 + 91754291 gtagcactggaga i chlSab2.chr15 C 0 C 0 s mm10.chr16 32784740 13 + 98207768 atggctgccgaga i mm10.chr16 C 0 I 8 s canFam3.chr33 2320395 13 - 31377067 ggggcagtggaga i canFam3.chr33 C 0 C 0 e calJac3.chr17 73835407 1651 + 74750902 I e panTro4.chr3_GL389630_random 37916 2788 - 103936 T a score=447686.000000 s hg38.chr3_KI270937v1_alt 59621 159 + 165607 tgctgaggaggggccacattctgggcacagtttgatggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggggaataaag-acggtgccgaggatttcggcctgagcacctgaaggatgcaactgacgttaactgagatggggaagatgcag s panTro4.chr3_GL389630_random 35128 160 - 103936 tgctgaggaggggccacattctgggcacagttagatggccttagagccagcagaatttcct---------ggtgcaaaatgtgag------aggggaataaagaacggtgccgaggatttcggcttgagcaactgaaggatgcaattgacgttaactgagatggggaagatgcag i panTro4.chr3_GL389630_random T 2788 C 0 s ponAbe2.chr3_random 183647 159 - 20583478 tgctgaggaggggccacattctgggcatagttagatggcagtagagccagcagaatttccc---------ggtgcaaaatgtgag-------ggggaataaagaacggtgccgaggatttcggcttgagcaactggaggatgcaattgacgttaactgagatagggaagatgcaa i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848462 160 - 123690457 tgctgaggaggggccacattctgggcatagtttgatggcagtagagccagcagaatttccc---------agtgcaaaatgtgag------ataggaataaagaacggtgccgcggatttcagcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 96974 162 - 111706 tgctgaggaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410266 162 - 192460366 tgctgaggaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagag----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgacattaactgagatggggaagatgcag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187331552 162 + 187378091 TGCTGAGGAGGGGCCAGATTCTGGGCACAGTTTGATGGCAGTAGAGCCAGCAGAATTTCCT---------GGTGCAACATGTGAGAG----AGAGGAATAAAGAACAGTGCCGAGGATTTCGGCTTGAGCAACTGAAGGATGCAATTGACATTaactgagatggggaagatgCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91356513 162 + 91754291 tgctgaggaggggccagattctgggcacagtttgatggcagtagagccagcagaatttcct---------ggtgcaacatgtgagac----agaggaataaagaacagtgccgaggatttcggcttgagcaactgaaggatgcaattgatattaactgagatggggaagatgcag i chlSab2.chr15 C 0 C 0 s mm10.chr16 32784761 145 + 98207768 tcgtggggagag---------tgggcattgttcga-ggaagagaaaccggttgaattttct---------tgtataaaatatgagaa----aggaaaatgattaatggttcag-------cggcaggagcggctgaagggtgcaagaggaatgaactgagcaaagggagacacag i mm10.chr16 I 8 I 961 s canFam3.chr33 2320408 165 - 31377067 ggctgagaaagg-ccggactctgg--agaatttgacaacaggagagccagtggaatcctctggcgagctgggtgtaaagagtgagggaactaggggaatgaagactggttttgagaactttggcttgagcaactgaaggacgtggctg-------ccaggagggagcggacacag i canFam3.chr33 C 0 C 0 e calJac3.chr17 73835407 1651 + 74750902 I a score=113797.000000 s hg38.chr3_KI270937v1_alt 59780 45 + 165607 gtggggcaggtccagaggaaaagatcagaacttcgattttagaaa s panTro4.chr3_GL389630_random 35288 45 - 103936 gtggggcaggtccagaggaaaagatcagaacttcgattttagaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183806 45 - 20583478 gtggggcaggtccagaagaaaaggtcagaacttcaattttagaaa i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848622 45 - 123690457 gtggggcaggtccagaggaaaagatcagaactttgattttagaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97136 45 - 111706 gtggggcaggtccagaggaagagatcagaacttcgattttagaAA i rheMac3.chrUn_JH291127 C 0 I 23 s macFas5.chr2 192410428 45 - 192460366 gtggggcaggtccagaggaagagatcagaacttcgattttagaAA i macFas5.chr2 C 0 I 1 s papAnu2.chr2 187331714 45 + 187378091 GTGGGGCAGGTCCAGACAAAGAGATCAGAActtcaattttagaaa i papAnu2.chr2 C 0 I 24 s chlSab2.chr15 91356675 45 + 91754291 gtggggcaggtccagacgaagagatcagaactttgattttagaAA i chlSab2.chr15 C 0 I 23 s canFam3.chr33 2320573 44 - 31377067 gcagagccgg-cttgggatccagattaagactctggctttggacg i canFam3.chr33 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e calJac3.chr17 73835407 1651 + 74750902 I a score=-2790.000000 s hg38.chr3_KI270937v1_alt 59825 5 + 165607 ---tgtg---g s panTro4.chr3_GL389630_random 35333 5 - 103936 ---cgtg---g i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183851 5 - 20583478 ---tgtg---g i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848667 5 - 123690457 ---tgtg---g i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187331783 8 + 187378091 ---TGTAtata i papAnu2.chr2 I 24 C 0 s canFam3.chr33 2320617 5 - 31377067 taccg------ i canFam3.chr33 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e calJac3.chr17 73835407 1651 + 74750902 I e chlSab2.chr15 91356720 23 + 91754291 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac3.chrUn_JH291127 97181 23 - 111706 I a score=10617.000000 s hg38.chr3_KI270937v1_alt 59830 10 + 165607 aggccaggag s panTro4.chr3_GL389630_random 35338 10 - 103936 aggccaggag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183856 10 - 20583478 aggctgggag i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848672 10 - 123690457 aggccgggag i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187331791 10 + 187378091 aggctgggca i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73837058 10 + 74750902 Aggctgggca i calJac3.chr17 I 1651 C 0 s canFam3.chr33 2320622 10 - 31377067 aatgtaggaG i canFam3.chr33 C 0 I 42 e mm10.chr16 32784906 961 + 98207768 I e chlSab2.chr15 91356720 23 + 91754291 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac3.chrUn_JH291127 97181 23 - 111706 I a score=259098.000000 s hg38.chr3_KI270937v1_alt 59840 287 + 165607 c-agtgctcattaactggaatcccagcactttgggaggccgaggtgggtggatcacttgaggtcaggagtttgagaccaggctggctgacacggtgaaactccgtctctactaaaaattc-aaaaaattagccgagcatggtggtggca--cctgtagtcccagatactcaggaggctgaggcaggagaatcacgtgaacccaagaggtggagcttgcagtgagctgagatcacgccactgcactccagcctgggtgacagagccaggctcctt-tccatctcaaaaagaaa s panTro4.chr3_GL389630_random 35348 287 - 103936 c-ggggctcattaactggaatcccagcactttgggaggccgaggcgggtgggtcacttgaggtcaggagtttgagaccaggctggctgacatggtgaaactccgtctctactaaaaatac-aaaaaattagccgaacatggtggtggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcacatgaacccaagaggcggagcttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagccaggctcctt-tccatctcaaaaaggaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 183866 281 - 20583478 c-ggtgctca-tgcctggaatcccagcattttgggaggctgaggcgggtggatcacttgaggtcaggagtttgagaccaggctggccgacatggtgaaactccatctctactaaaaatac-aaaaaattagctgagcatggtggcggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcatgtgaacccaagaggcggagcttgcagtgagcccaggtcacgccactgcactccagcctgggcgacagagccaggctgcat-tccatctcaa-----aa i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848682 287 - 123690457 t-ggtgctca-tgcctggaatcccagcactttgggaggctgaggcgggtggatcacttgaggtcaggagtttgagaccaggctggccgacacggtgaaactccgtctctactaaaaatacaaaaaaattagctgagcatggtggcggca--cctgtagtcccagctactcaggaggctgaggcaggagaatcacgtgaacccaagaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagactccgt-tccatctcaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187331801 286 + 187378091 caggggctca-tgcctgtaatcccagcactttgtgagtcagagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttacaaaaaaagtacaaaaattagccaagtgtggtggc-aca--tctgtggtcccagctcctcaggaggctaagacgggaggatcactggagcctgggaggttgaggctgcagtgagccatggtcgcaccactgcactgcagtttgagtg--agagtgagaccctgtctctattttaaaaaataa i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73837068 279 + 74750902 cagtggctca-tgcctgtaatcccagcactttgggaggctgaggcgggaggattccttgaactcagcagattgagacaaacctgggcaacatgggaaagtcccgtctctacagaaaaata-caaaagttagccaggtgtggt----gcaactctgtggtcccagctactcgggaggctgaggtgggaggatcacccaagcatgggaggtcgaggctgcagtgagctgtggcagcaccactccactgcag-ttgggtgacagagtgaggccctgt-ctcaatttgaaa----- i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320632 42 - 31377067 I e chlSab2.chr15 91356720 23 + 91754291 I e macFas5.chr2 192410473 1 - 192460366 I e rheMac3.chrUn_JH291127 97181 23 - 111706 I a score=35860.000000 s hg38.chr3_KI270937v1_alt 60127 88 + 165607 aaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaaatgaatacacAGTAT s panTro4.chr3_GL389630_random 35635 87 - 103936 aaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagaGAAAAAG-ATTGAAATGAATACACAGTAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184147 88 - 20583478 aaaaaaaagaaagaaatgttgaatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaattgaatacacAGTAT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2848969 88 - 123690457 aaagaaaagaaagaaatgttgcatgtgaggtatgtatttcatcaacatccaagtggagagattaagaattgaattgaatacacAGTAT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73837347 13 + 74750902 --------aaataaaTTGTTg------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320632 42 - 31377067 I e chlSab2.chr15 91356720 23 + 91754291 I e papAnu2.chr2 187332087 0 + 187378091 C e macFas5.chr2 192410473 1 - 192460366 I e rheMac3.chrUn_JH291127 97181 23 - 111706 I a score=13023.000000 s hg38.chr3_KI270937v1_alt 60215 16 + 165607 ACATTAATAATAATAG s panTro4.chr3_GL389630_random 35722 16 - 103936 ACACTAATAATAATAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184235 16 - 20583478 ACATCAATAATAATAG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849057 16 - 123690457 ACACTAATAATAATAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192410474 16 - 192460366 ACACTAATAATAATAG i macFas5.chr2 I 1 I 6 e mm10.chr16 32784906 961 + 98207768 I e calJac3.chr17 73837360 0 + 74750902 C e canFam3.chr33 2320632 42 - 31377067 I e chlSab2.chr15 91356720 23 + 91754291 I e papAnu2.chr2 187332087 0 + 187378091 C e rheMac3.chrUn_JH291127 97181 23 - 111706 I a score=40466.000000 s hg38.chr3_KI270937v1_alt 60231 21 + 165607 CTGTATATAAggctgggcaca s panTro4.chr3_GL389630_random 35738 21 - 103936 AGGTATATAAggctgggcaca i panTro4.chr3_GL389630_random C 0 I 2908 s ponAbe2.chr3_random 184251 21 - 20583478 CTGTATATAAggctgggcaca i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849073 21 - 123690457 CTGTATATAAggctgggcaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97204 21 - 111706 CTGTATATAAggctgggcaca i rheMac3.chrUn_JH291127 I 23 C 0 s macFas5.chr2 192410496 21 - 192460366 CTGTATATAAggctgggcaca i macFas5.chr2 I 6 C 0 s chlSab2.chr15 91356743 21 + 91754291 CTGTATATAAggctgggcaca i chlSab2.chr15 I 23 C 0 s calJac3.chr17 73837360 10 + 74750902 -----------gccaggtgca i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320632 42 - 31377067 I e papAnu2.chr2 187332087 0 + 187378091 C a score=570834.000000 s hg38.chr3_KI270937v1_alt 60252 270 + 165607 gtggctcatgtctgtaatcccagcactttgcgagtctgaggcaggaggactgcttgagctcagaagatcgagaccaacctgctcaacatggtaaagccccttttttac-aaaacaaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagc-tgggaggtggaggctgcagtgagccatggtcgcaccactgcactgcagtttggg---tgagagtgagaccctgtctcaattttaaaaaataa---------- s panTro4.chr3_GL389630_random 38667 271 - 103936 gtggctcatgtctgtaatcccagcactttgcgagtctgaggcaggaggactgcttgagctgagaagatagagaccaacctgatcaacatggtaaagccccttttttac-aaaaaaaagtacaaaaattagccag----------------ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtgagccatggccgcaccactgcactgcagtttggg---tgagagtgagaccctgtctcaattttaaaaaataa---------- i panTro4.chr3_GL389630_random I 2908 C 0 s ponAbe2.chr3_random 184272 286 - 20583478 gtggctcatgcctgtaatcccagcactttgtgagtctgaggcaggaggattgcttgagctcaggagatcgagactaacctggtcaacattgtaaagccccttttttacaaaaaaaaagcacaaaaattagccaggtgtggtggtgcac--ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagggagccatggtcgcaccactgcactgcagtttggg---tgagagtgagacgctgtctcaattttaaaaaataa---------- i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849094 285 - 123690457 gtggctcatgcctgtaatcccagcactttgcgagtctgaggcaggaggattgcttgagctcaggagatcgagatcaacctggtcaacatggtaaagccccttctttac-aaaaaaaagtacaaaaatcagtcaggtgtggtggcgcac--ctgtggtcccagctcctcaggaggctgaggtgggaggatcactggagcctgggaggtggaggctgcagtaagccatggtcgcaccactgcactgcagtttggg---tgagagtgagaccctgtctcaatttaaaaaaataa---------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97225 284 - 111706 ggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgggctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac--aaaaaaagtacaaaaattagccaggtgtggtggcgcat--ctgtggtcccagctcctcaggaggctaagaagggaggatcactggagtctgggaggttaaggctgcagtgtgccatggtcgtaccactgcactgcagtttggg---tgagagtgagaccctgtctctattttaaaaaataa---------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410517 284 - 192460366 ggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac--aaaaaaagtacaaaaattagccaggtgtggtggcgcat--ctgtggtcccagctcctcaggaggctaagatgggaggatcactggagcctgggaggttaaggctgcagtgtgccatggtcgcaccactgcactgcagtttggg---tgagagtgagaccctgtctctattttaaaaaataa---------- i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91356764 284 + 91754291 ggggctcatgcctgtaatcccagcactttgtgagtctgagacaggaggattgcttgagctcaggagatcgagaccaacctggtcaacatggtaaagccccttctttac--aaaaaaagtacaaaaattagccaggtgtggtggcacat--ctgtggtcccagctcctcaggaggctaagacgggaggatcactggagcctgggaggttgaggctgcagtgagccatggtcgcaccactgcactgcagtttgag---tgagagtgagaccctgtctcTATTTTTAAAAATAA---------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73837370 298 + 74750902 gtggctcacgccggtaatctcagcaccttgggaggccaagacaggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagaaacgccatctctac-taaaagta--aaaaaaattagctggatgtgatggtgcatgcctgtagtcccagcaactcgggcggctgaggcaggagaaccacttgaatcagagaggcagaggttgccgtgacccaagatcatgccactgcactccatgctgggcaacaagagtgaaacttcatctcaaaaaataataataaaataaaataa i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320632 42 - 31377067 I e papAnu2.chr2 187332087 0 + 187378091 C a score=6504.000000 s hg38.chr3_KI270937v1_alt 60522 3 + 165607 aTC s panTro4.chr3_GL389630_random 38938 3 - 103936 aTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184558 3 - 20583478 aTC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849379 3 - 123690457 aTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97509 3 - 111706 aTC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410801 3 - 192460366 aTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187332087 3 + 187378091 atc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91357048 3 + 91754291 ATC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73837668 1 + 74750902 --a i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320632 42 - 31377067 I a score=373526.000000 s hg38.chr3_KI270937v1_alt 60525 111 + 165607 GTTGTATCTAAGAGGTGGGATTATAGAAAAGTTTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTGGT-CTTTGGAATATTTCAAAATTTTGAAATCATAAACAAGtttt s panTro4.chr3_GL389630_random 38941 111 - 103936 GTTGTATCTAAGAGGTGGGATTATAGAAAAGATTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTGGT-CTTTGGAATATTTCAAAATTTTGAAATCATAAACAAGtttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184561 111 - 20583478 GTTGTATCTAAGAGGTGGGATTATAGAAAAGTTTTTCTTTCTC--------CTCTTCCTACTTCTTACTTTGCTTGGT-CTTTGGAATATTTCAAAATTTTGAAATCATAGACAAGtttt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849382 111 - 123690457 GTTGTGTCTAAGTGATGGGATTATAGAAAAGTTTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTGGT-CTTTGGAATTTTTCAAAATTTTGAAATCATAAACAAGtttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97512 111 - 111706 GTTGTATCTAAGAGGTGGGATTATAGGACATGTTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTGGT-CTTTGGAATTTTTCAAAATTTTGAAATCATAAACAAGTTTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192410804 111 - 192460366 GTTGTATCTAAGAGGTGGGATTATAGGACATGTTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTGGT-CTTTGGAATTTTTCAAAATTTTGAAATCATAAACAAGtttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187332090 111 + 187378091 gtTGTATCTAAGAGGTGGGATTATAGgacatgttttctttctc--------ctcttcccactTCTTACTTTGCTTGGT-Ctttggaatttttcaaaattttgaaatcataaacaagtttt i papAnu2.chr2 C 0 I 323 s chlSab2.chr15 91357051 111 + 91754291 GTTGTATCTAAGAGGTGGGATTATAGGACATGTTTTCTTTCTC--------CTCTTCCCACTTCTTACTTTGCTTAGT-CTTTGGAATTTTTCAAAATTTTGAAATCATAAACAAGTTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73837669 111 + 74750902 CTTGTGTATAAGAGGTGGGATTATAGACAACTTTTTCTTTCTC--------TTCTTCCTACTTCTTACTTTGCTTGGT-CTTTGGAATTTTTAAAAATTTTGAAATCATAAGCAAGTTTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2320674 117 - 31377067 GCTGTGTATAGGAAGTGGGGCT-TACAGATGTTTTTCTTTCTCTCCCACTTCTCTTTCTGCCTTTT--TTTTCTCGGTCCTTTTGAATTTTTCAAAATCGTGAACTCACAAGCAAGGTTT i canFam3.chr33 I 42 I 202 e mm10.chr16 32784906 961 + 98207768 I a score=24580.000000 s hg38.chr3_KI270937v1_alt 60636 8 + 165607 acttttat s panTro4.chr3_GL389630_random 39052 8 - 103936 acttttat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184672 8 - 20583478 acttttat i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849493 8 - 123690457 acttttat i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97623 8 - 111706 ACTTTTAt i rheMac3.chrUn_JH291127 C 0 I 278 s macFas5.chr2 192410915 8 - 192460366 acttttat i macFas5.chr2 C 0 I 14 s papAnu2.chr2 187332524 8 + 187378091 actttcat i papAnu2.chr2 I 323 I 8 s chlSab2.chr15 91357162 8 + 91754291 ACTTTTAT i chlSab2.chr15 C 0 I 10 s calJac3.chr17 73837780 8 + 74750902 GCTTTTAt i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320791 202 - 31377067 I a score=113313.000000 s hg38.chr3_KI270937v1_alt 60644 78 + 165607 ---------tt--taaatttatttatttat--gagacagagtcttgcccttttgcccaggctggggtgcagtggtaggatcttgggtcact s panTro4.chr3_GL389630_random 39060 78 - 103936 ---------tt--taaatttatttatttat--gagacagagtcttgcccttttgcccaggctggggtgcagtggcaggatcttggctcact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184680 78 - 20583478 ---------tt--taaatttatttatttat--gagacagagtcttgaccttttgcctaggctggagggcagtggtgggatcttggctcact i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849501 77 - 123690457 ---------tt--taagtttatttatttat--gagacagggtcttgccctttcgcccaggctggagggcagtttcgggatcttggg-cact i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192410937 80 - 192460366 ---------tttatctatttatttatttat--gagacagagtcttgccctttcacccaggctggagtgcagcggcgggatcctgggtcact i macFas5.chr2 I 14 C 0 s papAnu2.chr2 187332540 80 + 187378091 ---------tt--tttattcatttactttttggagacagggtctcacctcgccacccaggttggagtgcagaggtgtgaccTCAGCTGacg i papAnu2.chr2 I 8 C 0 s chlSab2.chr15 91357180 80 + 91754291 ---------tttatttatatatttatttat--gagacagagtcttgccctttcacccaggctggagtgtagcagtgggatcttgggtcact i chlSab2.chr15 I 10 C 0 s calJac3.chr17 73837788 76 + 74750902 ttcattttatc--tttattcatttattttt-------tgggtctcaccttgtcacc------ggagtgcagaggcgtgatctcagctgact i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320791 202 - 31377067 I e rheMac3.chrUn_JH291127 97631 278 - 111706 I a score=489674.000000 s hg38.chr3_KI270937v1_alt 60722 192 + 165607 gcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgggattacaggcacctgccaccacacccagctaattttcgtgtttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctc--gtgatccaccggcctcggcctcccaaagtgctggg s panTro4.chr3_GL389630_random 39138 192 - 103936 gcaacctctgcctcccgggttcaagtgattctcccgtctcagcctcctgggtagctgggattacaggcacctgccaccacacccagctaattttcgtgtttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctc--gtgatccaccggcctcggcctcccaaagtgctggg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184758 192 - 20583478 gcaacctccgcctcctgggttcaagcaattctcctgtctcagcctcctgggtagctgggattacaggcacctgccaccacacccagctaatttttgtggttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctc--gtgattcacccgcctcagcttcccaaagtgctggt i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849578 192 - 123690457 gcaacctccgcctcccgggttcaagcgattctcccgcctcagactccctggtagctgggattacaggcacctgccaccacgcccagctaatttttgtgtttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctc--atgatccaccggcctcggcctcccaaagtgctggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 97909 194 - 111706 gcaacctctgtctcccgggttcaagtgatcctcccacctcagcctcacgagtacctgggaatacaggtgtccacaattacacccagctaacttttgtatttttcgtagagacagggctttgccatgttgttcaggccagcctcaaacccctgagctcaagtgatccacccactccagcctcccaaagtgctggt i rheMac3.chrUn_JH291127 I 278 C 0 s macFas5.chr2 192411017 192 - 192460366 gcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccgagtagctaggattacaggcccctgccacgacacccagctaatttctgtgttttttgtagagacagagtttcaccatgctggccaggttggtctcaaactcctgacctc--gtgatccgcctgcctcggcctcccaaagtgctggg i macFas5.chr2 C 0 I 319 s papAnu2.chr2 187332620 193 + 187378091 gcaacctccgtctcccgggttcaagtgatcctcccacctcagcctcacgagtacctgggaatacaggtgtccacaatcacacccagctaacttctgtatttttcgtagagacag-gccttgccatgttgttcaggccagtctcaaacccctgagctcaagtgatccacccactccagcctcccaaagtgctggt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91357260 192 + 91754291 gcaacctctgcttctcaggttcaagcaattctcctgcctcagcctcccaagtagctaggattacaggcacctgccaccacacccagctaatttctgtgttttttgtagagacagggtttcaccatgctggccaggctggtctcaaactcctgacctc--gtgatctgcctgcctcggcctcccaaagtgctggg i chlSab2.chr15 C 0 I 319 s calJac3.chr17 73837864 192 + 74750902 gcaatctccatctcccgggttcaagtgatcctcccacctcagtcgcgagagtacctggga-tacaggtgtgcgccattacacctagctaatttgtgtattttt-gtagagacagagtttcaccatgttacccaggccagtctcagactcctgagctcaagcgatccgcccagctcagccttccaaagtcctggg i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320791 202 - 31377067 I a score=32357.000000 s hg38.chr3_KI270937v1_alt 60914 10 + 165607 attacaggcg s panTro4.chr3_GL389630_random 39330 10 - 103936 attacaggcg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184950 10 - 20583478 attacaggca i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849770 10 - 123690457 attacaggca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98103 10 - 111706 attacaggca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192411528 10 - 192460366 attacaggca i macFas5.chr2 I 319 C 0 s papAnu2.chr2 187332813 10 + 187378091 attacaggca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91357771 10 + 91754291 attacaggca i chlSab2.chr15 I 319 C 0 s calJac3.chr17 73838056 10 + 74750902 attacaggca i calJac3.chr17 C 0 C 0 e mm10.chr16 32784906 961 + 98207768 I e canFam3.chr33 2320791 202 - 31377067 I a score=718550.000000 s hg38.chr3_KI270937v1_alt 60924 245 + 165607 tgagccact---gagcc---tggccAAGTTTTACTTT----TATAATAAAAAGTA-AACCATATTAATTTTTTAAAAAAATAATAGCATGTAAGTTATAACATATA--AGAGGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgcgatcccactgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgctgcagcGGGCT s panTro4.chr3_GL389630_random 39340 245 - 103936 tgagccact---gagcc---tggtcAAGTTTTACTTT----TATAATAAAAAGTA-AACCatattaattttttaaaaaaataataGCATGTAAGTTATAACATATA--AGAGGAATAACTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgcgatcccaccgcaggccagacactctgcta-gttcaggggatactgagatgaacaaaggtggtccctgccctgccgcagcgggct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 184960 244 - 20583478 tgagccact---gagcc---tggccAAGTTTTACTTT----TATAATAAAAAGTA-AACCatattaatttttt-aaaaaataataGCATGTAAGTTATAACATATA--AGAGGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgcaatcccaccacaggccagacactctgcta-gttcaggggatattgagatgaacaaaggtggtccctgccctgccgcagcatgct i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2849780 245 - 123690457 tgagccact---gtgcc---cggccAAGTTTTACTTT----TATAATAAAAAGTA-AACCATATTAATTTTTTAAAAAAATAATAGCATGTAAGTTATAACATATA--AGAGGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgcaatcccaccgcaggccagacgctctgcta-gttcaggggatattgagatgaacaaaggtggttcctgccctgccacagtgcatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98113 242 - 111706 tgagccagt---gtgcc---tgaccAAGttttaa--t----tataataaaaagta-aaccatattaatttttt-aaaaaataataGCATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgtgatcccaccgcaggccagacgctctgcta-gttcaggagatactgagatgaacaaaggtggcccctgccctgccacagcgccct i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192411538 244 - 192460366 tgagccagt---gtgcc---tgaccAAGTTTTACTTT----TATAATAAAAAGTA-AACCATATTAATTTTTT-AAAAAATAATAGCATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgtgatcccaccgcaggccagacgctctgcta-gttcaggagatactgagatgaacaaaggtggcccctgccctgccatagcgccct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187332823 239 + 187378091 ggagccagt---gtgcc---tggccaagttttacttt----tctaataaa----a-aaccatattaatttttt--aaaaataatagcatgtAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGACATTTAAATTTAGGTCAATTCCA----CATTCTCTGCGATCCCACCGCAGGCCAGACGCTCTGCTA-GGTCAGGGGATACTGAGATGAACAAAGGTGGCCCCTGCCCTGCCATAGAGCACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91357781 239 + 91754291 tgagccagt---gtgcc---tggccAAGTTTTACTTT----TCTAATAAA----A-AACCATATTAATTTTTT--AAAAATAATAGCATGTAAGTTATAACATATA--AGAAGAATAATTGAG------------------------GCTTGTGTCCAGAACTTGAAATTTAAATTTAGGTCAATTCCa----cattctctgtgatcccactgcaggccagacgctctgccg-gttcaggggatactgagatgaacaaaggtggcccctgccctgccgtagcgcact i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73838066 255 + 74750902 tgagccact---gcacc---tggccAAGTTTTA----------TAATAAAAAGTA-AACCACATTTAATTTTA--AAACATAGTAACACGTACGTTATAAGACATG--AGAGGAATAATCAAGTATCGCAGACTTTCTTTTGAATCTGCTTGTGTCCAGAACTTG------AAATTCAGGTCAATTCCA----CAGTCTCTGCGTCCTTACCACAGGCTCGATGCCCTGCCA-GCTCAAGGGATACTGAGGTGAACAGAGGTGGCCTCTGCCCTGCTGTCACTCACT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2320993 272 - 31377067 tgagccacccaggagccccATAACCACATTTAATTTTAAAATataataataataataataataataataataa-taataataataaCTCG--ACTTACGAGCTAGAGGAGAGGAATAATTGAGTACTGCAGACTTTCCTGTGATCT-GCTTATGTCCAGAACTTG------AAattcaagtcaatccaacaggcattctctgtgatcctaccacaggccaggcgctctgctaggttcaaaggatactgaga-----aaatatggtccctgctctgaaggagctcaaa i canFam3.chr33 I 202 C 0 e mm10.chr16 32784906 961 + 98207768 I a score=2941145.000000 s hg38.chr3_KI270937v1_alt 61169 875 + 165607 GTTCGACAGGCTCCA-GGCCCGTCTCAGTAAATGCTATCATCAAAGTCCAAACCAAGACCTGGGGGAGTAGAAGG-AGGA-GGTAGCAGTGAGACTATACAC--AATCCCTGTACTATAAAAATGGCGAAAG-----------------CATGCAGA---TC-AATAGACAGCCTCTG-GGCCACACTGAGT-GAATTTTAATGCAGGATGGAAGCACACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---ACACATACACTCCGGTGGATGTGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACATGCTGCCCTTCATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCTAGGGGCAGCAC--C-CTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCAAAAGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCGCCAGAGGCAGAGGAC-AGGAAGGGACACTGGGGCAGAGTGCATGCGGAGGACGGCAACCCTTCCTGGgcctcctacatgctggacacaggctggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttaggatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagttgggaactagaattcacacccagatctagctggttcctaagctcattgtctAATCCCCGA s panTro4.chr3_GL389630_random 39585 874 - 103936 gttcaacaggCTCCA-GGCCCGTCTCAGTAAATGCTATCATCAAAGTCCAAACCAAGACCTGGGGGAGTAGAAGG-AGGA-GGTAGCAGTGAGACTACACAC--AATCCCTGTACTATAAAAATGGCGAAAG-----------------CATGCAGA---TC-AATAGACAGCCTCTG-GGCCACACTGAAT-GAATTTTAATGCAGGATGGAAGCACACAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTTCCC---ACACATACACTCCGGTGGATGTGAGCAAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTCATGGGAAACTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCTAGGGGCAGCAC--C-CTCTTTTGGCATACGGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACACGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCCGGTGGAGCTGGAGAGCAAGAGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCGCCAGAGGCAGAGGAC-AGGAAGGGACACTGGGGCAGAGTGCATGCGGAGGACGGCAACCCTTCCTGg-cctcctacatgctggacacaggctggtgcctcacacacattatgtcatctaaacctcacagcaaccttataaagcaggtgttacgatcctcattttataagggatgaaagtcgcatagaataacttatccaagatcacacagttgggaactagaattcacacccagatctagctggttcctaagctcattgtctAATCCCTGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 185204 854 - 20583478 gttcaacaggCTCCA-GGCCCGTCTCAGCAAATGCTATCATCAAAGTCCAAACCAAGACCT-GGGGAGTGGAAGG-AGGA-GGTAGCAGTGAGACTATACGC--AATCCCT-TACTGAGAAAAGGGCGAAAG-----------------CATGCAGA---TC-AATAGACAGCCTCTG-GGCCACGCTGTGT-GAATTCTAATACAGGATGAAAGCACACAGATG------GGTGACCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---ACACATACACTCCGGTGGACGTGAGCAAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTCATGGGAACCTTCTGGGTACCTCTCAGCACAGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCCAGGGGCAGCAC--T-CTCTTTGGGCGTACGGGACATGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGACGTGCAGTAAGGAGACCTGGAAGTGAGGCGCATGGGCGTGGAGTTCCTGGTGGAGCTGGAGAGCAAGGGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTTGCCACAGGCAGAGGAC-AGGAAGGGGCAGTGGGGCAGAGTGCATGCGGGg-------------------cctcctacatgcttgacacaggctggtgccttacacacattatgtcatctaaacctcacagcaaccttgtaaagcaggtgttacgatcctcattttataagggatgaaagtcgcatggaataactcatccaagatcacacagctgggaactagaattcacacccagatctagctggttccgaagctcattgtctAATCCCTGA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2850025 867 - 123690457 gttcaacaggCTCCA-GGCCCATCCCAGTAAATGCTATCATCAAAGTCCTAACCAAGACCTGGGGGAGTAGGAGG-AGGA-GGTAGCAGTGAGACTATACAC---ATCCCTGTACTGTAAAAATGGCGAAAG-----------------CATGCAGA---TC-AGT----AGCCTCTG-GGCCACACCGAGT-GAATTTTAATGCAGGACGGAAGCACACAGATG------GGTGAGCAGGTCTCTCTTTACTGAAACACAGAATATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---ACACATATACTCTGGTGGACGGGAGCGAGGGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCTGCTGCCCTTCCTGGGAACCT--TGTGTACCTCTCAGCACCGTAACGCAGCTGCAGTCTGTCGGTGG-----GGG-CCCAGGCC-GGGGCAGCAC--C-CTCTTTTGGTGTACAGGACATGCCTGGCTGCAGCTGATGTCCGTTAGCCTCTCCTGACGCGCAGTAAGGAGACCTGGAGGCGAGGCACGTGGGCATGGAGTTCCCGGCGGAGCTGGAGAGCAAGGGAGCCAGCT-GTCCTTTCAGCCC--ATCTGGCCCATGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGTGGGACAGAGTGCATGCGGAGGACGGCAACCCTTCCTGGgcctcctacatgcccgacacaggctggtgcctcacacacattatgtcatctagacctcacagcaaccttgtaaagcaggtgttacgatcctcattttataagggatgaaagtcgcgtggaataacttatcgaagatcacacagttgggaactagaattcacacccagatccagctggttccgaagctcattgtctAATCCCTGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 98355 872 - 111706 gttcaacaggctcca-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagtggaagg-aggA-GGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAACGGCGAAAG-----------------CATACAGA---TC-AACAGACAACCTCTG-GACCACGCTGAGT-GAATTTTCATGCAGGATGGAAGCACACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---GCATATATGCTCCGGTGGCCGTGAGCGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTCACAGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCATCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCAC--C-TTCTTTTGGCATACAGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCTGGCGGAGCTGGAGAACAAGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGGGGCAGAGTGCATGtgatggacggcaacccttcctggaccccttacatgccggacacaggctggtgcttcacacacattatgtcatctaaacctcacagaaaccttataaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttgggaactagaattcacacccagatctagctggttccgacgctcattgtctaattccTGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192411782 872 - 192460366 gttcaacaggctcca-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagtggaagg-agga-ggT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAACGGCGAAAG-----------------CATACAGA---TC-AATAGACAACCTCTG-GACCACGCTGAGT-GAATTTTAATGCAGGATGGAAGCACACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---ACATATATGCTCCGGTGGCCGTGAGCGA-GGTCCTGTTGCCACATCTGGGGTCAGGGGCTTGGACCGGCTGCCCTTCACAGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCAC--C-TTCTTTCGGCATACAGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTTCCTGGCGGAGCTGGAGAACAAGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGGGGCAGAGTGCATGTGATGGACagcaacccttcctggaccccttacatgctggacacaggctggtgcttcacacacattatgtcatctaaacctcacagaaaccttttaaagcaggtgttatgatcctcattttataagggatcaaagtcgcatagaataacttatccaagaccacacagttgggaactagaattcacacccagatctagctggttccgaagctcattgtctaattccTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187333062 872 + 187378091 GTTCAACAGGCTCCA-GGCCCGTCTCAGTAAATGCTATCATCAAAGTGCAAACCAAGACCTGGGGGAGTGGAAGG-AGGA-GGT-GCAGTGAGAATATTCAC--AATCCCTCTACCGTAAAAACGGCGAAAG-----------------CATACAGA---TC-AATAGACAACCTCTG-GACCATGCTGAAT-GAATTTTAATGCAGGATGGAAGCACACAGATG------GCTGATAAGGTCTCTCTTTACTGAA--ACAGAACACGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCC---GCATATACGCTCCGGTGGCCGTGAGCGA-GGTCCTGTTGCCACATCTAGGGTCAGGGGCTTGGACCGGCTGCCCTTCACGGGAAACTTCTTGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTTGGTGG-----GGG-CCCAGGCCATGGGCAGCAC--C-TTCTTTTGGCGTACGGGACAGGCCTGGCTGCAGCTGATGTCTGTTAGCCTCTCCTGATGCGCAGTAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTCCCTGGCGGAGCTGGAGAACAAGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCGCCATAGGCAGAGGAC-AGGAAGGGACAGTGGGGCAGAGTGCATGTGGAGGACGGTAACCCTTCCTGGGCCCCTTACATGCTGGACACAGGCTGGTGCTTCACACACATTATGTCATCTAAACCTCACAGAAACCTTCTAAAGCAGGTGTTATGATCCTCATTTTATAAGGGATCAAAGTCGCATAGAATAACTTATCCAAGACCACACAGTTGGGAACTAGAATTCACACCCAGATCTAGCTGGTTCCGAAGCTCATTGTCTAATTCCTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91358020 872 + 91754291 gttcaacaggctcca-ggcccgtctcagtaaatgctatcatcaaagtgcaaaccaagacctgggggagtggaagg-aggA-GGT-GCAGTGAGAATATCCAC--AATCCCTCTACCGTAAAAACGGCGAAAG-----------------CATACAGA---TC-AATAGACAACCTCTG-GACCACGCTGAGT-GAATTTTAATGCAGGATGGAAGCACACAGATG------GCTGATCAGGTCTCTCTTTACTGAA--ACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAG--CCCCTCCCT---GCATATATGCTCCGGTGGCCGTGAGCGA-GGTCCTGTTGCCACATCTAGGGTCAGGGGCTTGGACCGGCTGCCCTTCACAGGAAACTTCTGGGTACCTCTCAGCACAGTAATGCAGCTGCAGTCTGTGGGTGG-----GGG-CCCAGGCCATGGGCAGCAC--C-TTCTTTTGGCGTACGGGACAGGCCTGGCTGCAGCCGATGTCTGTTAGCCTCTCCTGACGCGCAGCAAGGAGACCTGGAAGTGAGGCGCGTGGGCGTGGAGTCCCTGGCGGAGCTGGAGAACAAGGGAGCCAGGTGGTCCTTTCAGCCC--CTCTGACCCATGAGCTCACCGTAGGCAGAGGAC-AGGAAGGGACAGTGGGGCAGAGCGCATGTGGAGGACGGCAACCCTTCCTGGGCCCcttacgtgctggacacaggctggtgcttcacacacatgatgtcatctaaacctcacagaaaccttataaagcaggtgttacgatcctcattttataagggatcaaagtcgcagagaataacttatccaagaccacacagttggggactagaattcacgcccagatctagctggttccgaagctcattgtctaattccTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73838321 868 + 74750902 GTTCCACTGGCTCCA-GGCCAGTCTCACTAAATGCT-TAATCAAAGTCCAAAGCAAGACCTGGGGCATTGGAAGGAAGGA-GGGAGCCATGAGCACATTCAC--AACCCCTAGACTGTAAAGATGGCGAGAG-----------------CACACAAG---TC-AACGGACAG---CTG-GGTCATACTGAGT-GAAGGTTAAGGCAGG----AAGCACGCAGATG------GGTGATCAGGTCTCTCTTTACTGAAACACAGAACATGTGCCAAG---GTGAGTCCAAGGACACCTCTGGGAACAGGTGAAGCCCCCCTCCCC---ACACATATACTCCACTATACGGGAGCTAGGGTCCTGTTACCACATCTGGGGTGAGGGGCTTGGGCCGGCTGCCCTTCATGAGAAACTTCTGGGTGCCTCTCCACACAGCAATGCAGCTCCAGTCTGCTGGTAG-----GGG-CCCAGGCCGTGGGCAGCCC--C-CTCTTTTGGCATATGAAACATGCCTGGTTGCAGCTGATGTCCGCTAGCCTCTCCTGATGCGCAGTAAGGAGACTTGGAGGAGAGGCACGTGGGCGTGGAGTTCGCGGCGGACCTGGAGAGCAAGGGAGCCAGGCGGTCCTTTCAGACC--ATCTG-CCCGTGAGCTCACCACAGGCAGAGGAC-AGGAAGGGACAGTGGG-CAGAGCGCGTGAGGAGGACGGCAACCCTCCCCGGGCCTCCCACACgctagactcaggctgggggctt-cacacacgatgtcatcaaaacttcacagcaaccttataaagcaggtgttatgaccctcatattgtaagggacgaaagtcgcaacgaatcactcatccaacgccacacagttaggaactagaattcacacccaaatctggctggttccaaagtccattgtccaatccctga i calJac3.chr17 C 0 C 0 s mm10.chr16 32785867 775 + 98207768 GTTCAACAGGCTCCAGGGCAAGTCTTGGTAA-----------AAATGTCAAACCAA--------------------ATCA-GGCAACAG-GAAATCACTCCCCAAATTCCCACGTAGTAAAAACATCTAAGG-----------------CACCTGGGATCCC-TACAGATAATCTCTGAGGTTATACTGAGG-GTCACTGAGTACAAAACAGAAGAGCACAGGTG------AGTGATCAGGTCTCCCTTTACCGAAATACAATAACCAGGCAGAGGATGTGAG-----GGACATCTCTGAAAAGAGGT-CAG--CCCCTCCCCTT-GCACATACACTCAGGCATAAGTGGACCAAGGTCTTGTGGTCAGGTATGGGGGAGGGCTCTCGAGCCAGCTGGCCTTCATGAGAAACTTTGGAGTCCAT---AGCACAGAACTGTGGCTGTGGTCTGTTGGTAGCGTTTGGG-CCTCGGT----GGCATCAC--CGTTCTTCTGGCACAGAGGCCATGCCTGGTTGCAGCTAGCATTCCTCAACCCCTCCTGATGCTCAGGAAGGACATGTGGACAAGTGGCATGCGGGCGTGCAGTTCACGGCGGAGCTGGAAAACAAAATAA-CATGTGGGGTACCCAGCCT--ATCTG-CCTGGGAGCCCACCGTACGGCAAGGACGAGAAAGGGGCAGTGGAG------------GGACATCCACAATGCTTCCTGGGC--------------------------------------------CACTTAAAACTcac-------------agcaggtgctctgaacctcattctgtaggatgtaaaggtagtaaggactgaagtaatcaaacctacacagct----aatagaacccaacctcagatctgcctgactcctgggc-cattgGCCAGATCTCAA i mm10.chr16 I 961 I 279 s canFam3.chr33 2321265 883 - 31377067 gttcaacagactccagggccagcctccgtaagtgccataatcaaggtccaaaccaagaaccaggggagaatgagg-agggcGGTTGTAGGGAGGATGCACAA--AATCCCTGTATCATAAAAACGTAAAAAAACCTTAACCAAACAACCTATATGGC---TCAAACAGATAACCTCTG-GGCCACACCGTGCAGAATTCTAATGTCCGAGAGAAGCACAACGAGGGTGACAGGTGATCAGATCACTCTTTACTGCAACATGACACATGTGCCAGA---GGGAGTCCAAGGGCATCTTTG-GAACAAGGGAAG--CCCCCCCACCCAACACACACAC-CTGGCATATGTGGGCCAGGGTCCCGCTGCAGTGTCTGGGG-CAAGGCCTTAGGC-AGCTGACCTTCG-GGGAAGCTTCCAGGTACAT-GCAGC-CTGTAGCGTAGCTCCAGTCGGGAAGTGG-----GGGTCCCAGGCCGCCGGCAGCGCTGC-CCCTTTGGGCCCACA-GCCACCCCTGGCTGCGGCTGATGTGCCTCAGCCCCTCGTGACATGCAGCAGAGAGACCCGGGTGGGAGGCAGGTGGGCATGCAGTTCACGGCAGAGCTGGAGGGCAAAAGGAGCAGAAGGTACTTCCAGCCCGAATGTGGCCCGTGAGCTCCCCACAGGCCGAGAAC-AGGACGAGACAGTGGGAGCAAACGCACAGGGAGGCCAGCAGCAGTCTCCGCGCCC----CAGCCTGGGCCCGGACT-gtgcttcgcgcacattatgtcgtcca-acctcactgtaaccttaggaagcaggtgctgt-accttcgttttatagaggaagaaaataacatggaacaacctacccaagttcacagagtcaggaagtggaattcacccccagatccatatggctccagagc-------------ccCGA i canFam3.chr33 C 0 C 0 a score=110182.000000 s hg38.chr3_KI270937v1_alt 62044 40 + 165607 GCCC--AAACTGTTGGGCTGTCCCCGG--ACGAGAACTGATGCC s panTro4.chr3_GL389630_random 40459 40 - 103936 GCCC--AAACTGTTGGGCTGTCCCCGG--ACGAGAACTGATGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186058 40 - 20583478 GCCC--AAACCATTGGGCTGTCCCCAG--ATGAGAACTGACACC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2850892 42 - 123690457 GCCC--AAACTGTTGGGCTGTCCCCGGACACGAGAACTGACACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99227 39 - 111706 GCCC--AAACCGT-GGGCTGTCCCCGG--ACGAGAACTGACGCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192412654 39 - 192460366 GCCC--AAACCGT-GGGCTGTCCCCGG--ACGAGAACTGACGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187333934 39 + 187378091 GCCC--AAACCGT-GGGCTGTCCCCGG--ACAAGAACTGACGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91358892 38 + 91754291 GCCC--AAACCGT--GTCTGTTCCCGG--ACGAGAACTGACGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839189 39 + 74750902 gccc--aaactgt-cAGCTGTCCCCAG--ACAAGAACTGACACC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2322148 40 - 31377067 GCCCTGGGTCTGT-GTCCTACTCCCA---ACGAGAACTCACACC i canFam3.chr33 C 0 C 0 e mm10.chr16 32786642 279 + 98207768 I a score=301962.000000 s hg38.chr3_KI270937v1_alt 62084 91 + 165607 CAACC-CCATGTGGCCTGGTGCCTGCGCCTCAGCTGCTTGACCTGCTCCTGATCTCG-CGGTTTCTTTCCGATTCCTGAAATCATTTCTGGTT s panTro4.chr3_GL389630_random 40499 91 - 103936 CAACC-CCACGTGGCCTGGTGCCTGTGCCTCAGCTGCCTGACCTGCTCCTGATCTCC-CGGTTTCTTTCCGATTCCTGAAATCATTTCTGGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186098 90 - 20583478 CAACC-CCACATGGCCTGGTGAGTGCACCTCACCTGCCTGACCTGCTCCTGATCTCC-CAGTTT-TTTCTGATTCCTGAAATCGTTTCTGGTT i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2850934 91 - 123690457 CAACC-CCACATGGCCTGGTGCCTGCGCCTCAGCTGCTTGACCTGCTCCTGATCTCC-CAGTTTCTTTCCGATTCCTGAAATCATTTCTGGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99266 91 - 111706 CAACC-CTACAGGGCCTGGTGCCTGCGCCTCAGCTGCCCGACCTGCTCCCGATCACC-CAGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192412693 91 - 192460366 CAACC-CTACAGGGCCTGGTGCCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-CAGTTTCTTTCCGATTCCTGAAATCGTTTCCGGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187333973 91 + 187378091 CAACC-CTACAGGGCCTGGTGCCCGCGCCTCCGCTGCCCGACCTGCTCCTGATCACC-CAGTTTCTTTCCGATTCCTGAAAACATTTCCGGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91358930 91 + 91754291 CAACC-CTACAGGGCCTGGTGCCTGCGCCTCAGCTGCCCGACCTGCTCCTGATCACC-CAGTTTCTTTCCGATTCCTGAAATCATTTCCGGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839228 78 + 74750902 CAACCTCCACATGGCCTGGTGCCTGCGCCTCAGCTACCGGGCCTGTTC----------CGGTGTCTTTCCGATTCCTGAAATCATTTC----- i calJac3.chr17 C 0 C 0 s mm10.chr16 32786921 92 + 98207768 CAATC-CCATGTGGCCTCACTCCTAGACCTCAGCTGCCTGACCTGATCCTGAACTCCACGGTTGCTCTCTGACCTCTGAAACATCTGCTAGTT i mm10.chr16 I 279 I 26 s canFam3.chr33 2322188 86 - 31377067 CAGCA-CCC----GCATGGTGCTTGCACTTCAGCT-CCTGACCTGCTTCCTCCTCCC-TGGCCCCTTTCTGACTCCTGAAATGGTTTCCAGTT i canFam3.chr33 C 0 C 0 a score=44856.000000 s hg38.chr3_KI270937v1_alt 62175 16 + 165607 -TGGGGGCTTAGACCTG s panTro4.chr3_GL389630_random 40590 16 - 103936 -TAGGGGCTTAGACCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186188 16 - 20583478 -TGGGGGCTTAGACCTG i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851025 16 - 123690457 -TGGGGGCTTAGACCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99357 16 - 111706 -TGGGAGCGCAGACCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192412784 16 - 192460366 -TGGGAGCGCAGACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334064 16 + 187378091 -TGGGAGCGCAGACCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359021 16 + 91754291 -TAGGAGCGCAGACCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839306 15 + 74750902 --GGGGGTTCAGACCTG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2322274 17 - 31377067 TAGGGGGCTCGCATCTG i canFam3.chr33 C 0 I 254 e mm10.chr16 32787013 26 + 98207768 I a score=889409.000000 s hg38.chr3_KI270937v1_alt 62191 325 + 165607 AGATTCAAAACTGGCTTCCCggccgggtgcggtggctcacgccaataatcccagtgctttgggaagcagaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggtagtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggtggaggttgcagtgagccgagatcgtgccattgcactccag-----cctggacgacagagcgagaatctgtctcaa---gaaaaataaaagaaaagaaa------------a s panTro4.chr3_GL389630_random 40606 325 - 103936 AGATTCAAAACTGGCTTCCCggctgggtgcggtggctcacgccaataatcccagtgctttgggaagcagaggcaggtgggtcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggtagtgtgcacctgtaatcccagctactagggaggttgaggcaggagaattgcttgaatccgggaggcggaggttgcagtgagccgagatcatgccattgcactccag-----cctggacgacagagagagaatccgtctcaa---gaaaaataaaagaaaagaaa------------a i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186204 325 - 20583478 AGATTCAAAACTGGCTTCCCggctgggtgcggtggctcacgccaataatcctggtgctttgggaagcagaggcgggtgggtcacctgaggccaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaattagccaggagtggtagtgtgcacctgtaatcccagctactagggaggttgaggcaggagaatcacttgaatccaggaggcggaggttgcagcgagccgagattgcaccgttgcactccag-----cctggacgacagagcgagaatctgtctcaa---gaaaaataaaagaaaagaaa------------a i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851041 323 - 123690457 AGATTCAAAACTGGCTTCCCAgccgggtgcagtggctcacaccaataatcccagtgctttgggaaacagaggtgggtgggtcaccttaggtcaggtgttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaatacaaaaattagccaggagtggtggtgggcgcctgtaatcccagctactagggaggttgaggcaggagaatcgcttgaatctgggaggcagaggttgcagtgagccaagattgcgccattgcactccag-----cctggatgacagagcgagaatctgtctcaa---gaaaaagaaaagaaaaaaa-------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99373 336 - 111706 AGACTCAAAACTGGCTTCCTggctagatgcggtggctcacgccaataatcccagtgctttgggaagctgaggtgggtgggtcatttgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaataatacaaaaattagccgggagtggtggtgggcacctgtagtcccaggtactcaggagactgaggcaggagaattgcttgaaccagggaggcggaggttgcagtgagccgagatcgcgccattgcactccattgcactctggacaacagagtgagaatctgtctcag---gaaaaagaagagaaagagaaagagaa------a i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192412800 326 - 192460366 AGACTCAAAACTGGCTTCCTggctagatgcggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatttgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggtggcgggcacctgtagtcccaggtactcaggagactgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccattgcactctgaacaacagagtgagaatctgtctcag---gaaaaagaagagaaag----------------a i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334080 326 + 187378091 AGATTCAAAACTAGCTTCCTGGCttgatgcggtggctcacgccaataatcccagtgctttgggaagctgaggcgggtgggtcatctgatgtcaggagttcaagaccaacctgaccaacatggagaaaccccgtctctactaaaaatacaaaaatcagccgggagtggtggcgggcacctgtaatcccaggtactcaggagactgaggcaggagaattgcttgaacctgggaggtggaggttgcagtgagccgagatcgcgccattgcactccattgcactctggacaacagagtgagaatctgtctcaa---gaaaaagaagagaaag----------------a i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359037 342 + 91754291 AGATTCAAAACTGGCTTCCTggctaggtgcggtggctcacgccaataatcccagtgctttgggaagctgaggtggatgggtcacctgatgtcaggagttcaagaccaacctgatcaacatggagaaaccccgtctctactaaaaacacaaaaatcagccgggtgtgctggtgggcacctgtaatcccagctactcgggagactgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcgcgccattgcactccattgcactctggacaacagagcgagaatctgtctcag---gaaaaagaagagaaagagaaagagaaagaaaga i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839321 326 + 74750902 ACATTCAAACCTGGCTTCCTggctgggcacgggggctcacacccataatcccatcactttgggaagccgaggcaggtggatttcctgaagtcaggagttcaagaccagcctggccaacatggcaaggccctgtctctactaaaaatacaaaaattagccaggtgtggtggtgggcacctccaatcccagctactcaggaggccaaggcaggacaatcacttgaacccgggagacggaggttgcagtgagccaagatcacagcatcgcacttcag-----cccggacgacagagcgaga--ctgtctcaaagcaataaataaaaggaaagaaa------------a i calJac3.chr17 C 0 I 1 e mm10.chr16 32787013 26 + 98207768 I e canFam3.chr33 2322291 254 - 31377067 I a score=774011.000000 s hg38.chr3_KI270937v1_alt 62516 389 + 165607 gaaaaagagaaag--aaaaagaaaaagaaaaag-----aaaaCTGGCTTCCCAgccggacacaatgactcaacgcctgtaatcccagcactttgggaggctgaggtgggtggatcatgaggtcaagagttcaagactagcctggccaagatgctgaaacctgaaactccatctctactaaaaatacaaaaattagccaggtatggtggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggcggaggttgtggtgagccaagatcgcaccactgcactccagcttggatgacagagtgagactcagtctcaGaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaGCAAT s panTro4.chr3_GL389630_random 40931 370 - 103936 gaaaaagagaaag--aaaaagaaaaagaaaaa---------ACTGGCTTCCCAgccgggcgcaatgactcaacgcctataatcccagcactttgggaggctgaggtgggtggatcacgaggtcaagagttcaagactagcctggccaagatgctgaaacctgaaactccatctctactaaaaatacaaaaattagccaggtatggtggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggcggaggttgtggtgagccaagatcgcaccactgcactccagcttgggcgacagagtgagactcagtctcagaaaacaaaacaaaacaaaacaaaacaaaacaaaa---------------GCAAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186529 374 - 20583478 gaaaaagaaaaag--agaaagaaaaagaaaaagaaaacaaaaCTGGCTTCCCagctgggcgcaatgactcaacgcctgtaatcccagcactttgggaggctgaggtgggtggatcacgaggtcaagagtttgagactagcctggccaagatgctgaaacctgaaactctgtctctactaaaaatacaaaaattagccaggtatggtggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggcggaggttgtggtgagccaagatcgcaccactacactccagcctgggtgacagagtgagactcagtctcagaaaacaaaacaaaacaaaacaaaacaaaa--------------------GCAAC i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851364 347 - 123690457 -----------------aaagaaaaagaaaac------aaaaCTGGCTTCCCAgccaggcgcaatgactc-atgcctataatcccggcactttgggaggccgaggcgggtggatcacaaggtcaagagctcaagactagcctgaccaacatggtgaaacctgaaactccatctctcctaaaaatacaaaaattagccgggtatggtggtgcgggcctgtaatcccagctactcagaaggttgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagccaagatcgcaccattgcactccaggctgggcgacagagcgagactcagtctcagaaaagaaaagaaaacaaaacaaaa-------------------------acaaC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 99709 363 - 111706 gaaagagaaagagagaaagggaaaaagaaaaa---aacaaaACTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctgaggtgagtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactaaacatgtaaaaattagcc-ggtttgctggcgcgggcttgtaatcccagctactcgggaggcagaggcaggagaatgtcttgaacctgggaggtggaggttgcagtgagccgagatctcaccactacactccagcct-ggcgacagagcgagacacactctcagaaaacaaaacaaaacaaaac------------aa---------------aCAAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413126 375 - 192460366 gaaagagaaagagagagagagaaaaagaaaAA---AACAAAACTGGCTTTCCAgccaggcgcaatgactc-atgcctgtaatcccagcactttgggaggctgaggtgagtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccctgtctctactaaacatgtaaaaattagcc-ggtttgctggcgcgggcttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaggtggaggttgcagtgagccgagatctcaccactacactccagcct-ggcgacagagcgagacacagtctcaGaaaacaaaacaaaacaaaacaaaacaaaacataa---------------acaaC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334406 364 + 187378091 gaaagagagaaagacaaaaagaaaaagaaaaa---aacaaaactggcttTCCAGCCAGgcgcaatgactc-atgcctgtaatcccagcactttgggaggctgaggtgggtggatcacaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactaaacatgtaaaaattagcc-ggtttGCTGGCGCgggcttgtaatcccacctactcgggaggcggaggcaggagaatgtcttgaacctgggaggtggaggttgcagtgagccgagatcgcaccactgcactccagcctgggcgacagagcgagacacagtctcagaaaacaaaacaaaacaaaac------------aa---------------acaac i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359379 366 + 91754291 gaaagagagaaagagaaagagaaaaagaaaAA---AACAAAACTGGCTTTCCAgccaggcgcaatgactc-acgcctgtaatcccagcactttgggaggctgaggtgggtggatcagaaggtcaagagttcgagactagcctggccaagatggtgaaacctgaaaccccgtctctactaaacatataaaaattagct-ggtttgctggcgcaggtttgtaatcccagctactcgggaggcggaggcaggagaatgtcttgaacctgggaggtggaagttgcagtgagccgagatcgcaccactatactccagcctgggcaacagagtgagacacagtctcagaaaacaaaacaaaacaaaac----------ataa---------------acaaC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32787013 26 + 98207768 I e calJac3.chr17 73839647 1 + 74750902 I e canFam3.chr33 2322291 254 - 31377067 I a score=2997.000000 s hg38.chr3_KI270937v1_alt 62905 1 + 165607 T s panTro4.chr3_GL389630_random 41301 1 - 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186903 1 - 20583478 T i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851711 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100072 1 - 111706 T i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413501 1 - 192460366 T i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334770 1 + 187378091 t i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359745 1 + 91754291 T i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839648 1 + 74750902 C i calJac3.chr17 I 1 C 0 s canFam3.chr33 2322545 1 - 31377067 T i canFam3.chr33 I 254 C 0 e mm10.chr16 32787013 26 + 98207768 I a score=644849.000000 s hg38.chr3_KI270937v1_alt 62906 214 + 165607 GGCTTCCCTCTCCCACAAGGATTCACACTCGCTACTTTGATTATCACATGCCGGgggcatttgtcacttatttggccatcgggtgtcgag-cccccgtgccatgtttagggaactcctc----acagtgggagtcacgATCGGCCTCACTGCTGCTAAGAGAACTCCAAGGACACAGA-----CATCCCTTCTTCCCGTCCCCTGGCACCTGGCTGTGGGCTCA s panTro4.chr3_GL389630_random 41302 214 - 103936 GGCTTCCCTTTCCCACAAGGATTCACACTCGCTACTTTGATTATCACGTGCCGGgggcatttgtcacttatttggccgtcgggtgtcgag-cccccgtgccatgtttagggaactcctt----acagcgggagtcacgatcggcctcgctgctgctgagagaactccaaggacgcaga-----catcccttcttcccgtcccctggcacctggctgggggctca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 186904 213 - 20583478 GGCTTCCCTCTCCCACAAGGATTCACACTCGCTACTTTGATTATCACGTGCCAGGGGCATTTGTCATTTATTTGGCCATCGGGTGTCGAA--CCCCGTGCCGTGTTTAGGGAACTCCTT----ACAGTGGGAGTCATGATGGGTCTCGCTGCTGCTAAGAGAACTCCAAGGACGCAGA-----TATCCCTTCTTCCCAACCCCTGGCTCCTGGCTGTGGGCTCA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851712 213 - 123690457 GGCTTCCCCCTCCCACAAGGATTCACACTCGCTGCTTTGCTTATCACGTGCC-Ggggcatttgtcatttatttggccatcgggtgtcaaa-cccccgtgccatgtttagggaactcctt----acagtgggagtcacgATGGGCCTCGCTGCTGCTAAGAGAACTCCAAGGACACAGA-----TATCCCTTCTTCCCATCCCCTGGCACCTGGCTGTGGGCTCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100073 214 - 111706 GGCTTCCCTCTTCCACAAGGATTCACACTCGCTACTTTGATTGTCATGTGCCGGGAGcatttgtcatttatttggccatcgggggtcgaa-tctccgtgctatgtttagggaactcctt----gcggtaggagtcttgatgggcctcgctgccactaagagaactccaaggatgcaga-----tatcccttcttcccatcccctggcacctggctgtggactca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413502 214 - 192460366 GGCTTCCCTCTTCCACAAGGATTCACACTCGCTACTTTGATTGTCACGTGCCAGGGGCATTTGTCATTTATTTGGCCATTGGGGGTCGAA-TCTCCGTGCTATGTTTAGGGAACTCCTT----GCGGTAGGAGTCTTGATGGGCCTCGCTGCCACTAAGAGAACTCCAAGGATGCAGA-----TATCCCTTCTTCCCATCCCCTGGCACCTGGCTGTGGACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334771 209 + 187378091 ggCTTCCCTCTTCCACAAGGATTCACAATCGCTACTTTGATTGTCACGTGCCGGGGGCATTTGTCATTTGTTTGGCCATCGGGGGTCGAA-TCTCCTTGCTATGTTTAGGGAACTCCTT----G-----GGAGTCTTGATGGGCCTCGCTGTCACTAAGAGAACTCCAAGGATGCAGA-----TATCCCTTCTTCCCATCCCCTGGCACCTGGCTGTGGACTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359746 211 + 91754291 GGCTTCCCTCTTCCACAAGGACTCACACTCGCTACTTTGATTGTCACGTGCCAGGGGCATTTGTCCTTTATTTGGCCATCGGGGGTCGAA-TCTCCGTGCTATGTTTAGGGAACTCCTT----GCGGTGGGAGTCTTGATGGGCCTCGCTGCCACTAAGAGAACTCCAAGGATGCAGA-----TATCCCTTCTTCCCATCCCCTGGCAC---GCTGTGGACTCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839649 198 + 74750902 GGCCTCCCTCTTCAACAGGGGTCCACACGTGCTCCTTTGGTTACTGTGTGCCGA-------------------GGCCACCTGGCATCAAA-CCCCCATGCCATGTTCAGGGAGCTCCTCCATGACAGTGGGAGTTATGATGGGCCTCGCTGCCACGGAGAGAACGTCAGGGATGCCCA-----TATCCCCTCTTCCCAGCCCCTGGCAACTGGGTGTGCACT-A i calJac3.chr17 C 0 C 0 s mm10.chr16 32787039 188 + 98207768 GGCTTCTCTCTCCCATGAGGATTTGCACTCGCCACTTTGATGTT--TGTGACAG--ACACCTGCCATCTGTCCTAC--------ATCAAA-CGTTGATGCTCTATGGACAGGAATCCTC----AGGAAGAAGGTCA--GTGAGCCTCCCTTGTTACCAGAGAG-TCTGGAAAGCCAGAATATTTATTCCCTCTTAATATCCCTGGGTA---------------- i mm10.chr16 I 26 C 0 s canFam3.chr33 2322546 213 - 31377067 GGCCTCCCTCCTTGGCGAGGGTTCACACTTCCCATTTTGATTATCATGCGCGGTAGGCATTGGTCATGTCTCT-GCTGTCCACTTTCAAAGCCGCCATGCGGCGTTCAGGGCGCTTCTT----ACTATGGGAGTCCCGACGGGCCCC-TTTCCACTAAGAGAACTTCAAGGGCCCGGT-----TATTCCCCCTTCTCATCCCCTGGCAGCAAGATGTGGCCACA i canFam3.chr33 C 0 I 8 a score=481832.000000 s hg38.chr3_KI270937v1_alt 63120 158 + 165607 TGGGAGTACAAGGGCTAAGCTCAGCCTATCAAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGTGAGACAAAAAGGCAGCGAGAACCTA--TGTGAA--TGTGTGTGCAGGCCACGTGATGCCCCTTGGCTGTGGCAGCATCCAATAGTGA s panTro4.chr3_GL389630_random 41516 158 - 103936 tgggagtacaagggctaagctcggcctatcaaatgttcctactcaggactttggctctggagcaaaaagtccagtgagacaaaaaggcagCGAGAACCTA--TGTGAA--TGTGTGTGCAGGCCGCGTGATGCCCCTTGGCTGTGGCAGCATCCAATAGTGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 187117 158 - 20583478 TGGGAGTACAAGGGCTAAGCTCGGACTATCGAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCTG--TGTGAA--CGTGTGCGCAGGCCGCGTGATGCCCGTTGGCTGTGGCAGCATCCAATAGTGA i ponAbe2.chr3_random C 0 C 0 s nomLeu3.chr11 2851925 158 - 123690457 AGGGAGTATAAGGGCTAAGCTCGGCCTATCGAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCTG--TGTGAA--CGTGTGCGCAGGCTGCGTGATGCCCGTTGGCTGTGACGGCATCCAATAGTGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100287 158 - 111706 cgggagcacaagggctaagctctgcctatcagatgttcctactcaggactttggctctggagcAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAA--CGTGTGCGCAGGCCGCATGACGCCCGTCGGCTGTGGCAGCGTCCAGTAGTGA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413716 158 - 192460366 CGGGAGCACAAGGGCTAAGCTCGGCCTATCAAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAA--CGTGTGCGCAGGCCGCATGACGCCCGTCGGCTGTGGCAGCGTCCAGTAGTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187334980 158 + 187378091 CGGGAGCACAAGGGCTAAGCTCGGCCTATCAAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGCGAGACAAAAAGGCAGCGAGAACCCG--TGTGAA--CGTGTGCGCAGGCCGCATGACGTCCGTCGGCTGTGGCAGCGTCCACTAGTGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91359957 158 + 91754291 CGGGAGCACAAGGGCTAAGCTCGGCCTATCAAATGTTCCTACTCAGGACTTTGGCTCTGGAGCAAAAAGTCCAGCAAGACAAAAAGGCAGCGAGAACCCG--TGTGAA--CGTGTGCGCAGGCCGCATGACGGCCGTCGGCTGTGGCAGCGTCCAGTAGTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73839847 154 + 74750902 TGGGAGCACAAGAGCTAAGCTCAGCCTATCGAATATTCCCACTCAGGAC--TGGCTCTG--ACAGGTGACCC--CGAGACAAAAAGGCAGCAAGAACCCA--TGTGAAATCGTGTGCATGGGCAGCATGATGCCCGTCAGCTGTGGCAGCATCCAATAGTGA i calJac3.chr17 C 0 I 800 s mm10.chr16 32787227 141 + 98207768 --GTGGTACAAGAGCCAAACATGGCTGATTGGACGCTCCTGCTCAGAGCTTTGGCCCTGCAACCAGCAGCCCA--AAGACGATGTCCCAGTGGGAACCCACTTGTGAC--GGCACATGGAGGAAGCACGACATCCACGGACAGTG--------CA------- i mm10.chr16 C 0 C 0 e canFam3.chr33 2322759 8 - 31377067 I a score=297643.000000 s hg38.chr3_KI270937v1_alt 63278 101 + 165607 CTGACCAGCAAGAGGGACAGTGTCCCAGCCAGCCTGATCCCACTGTCTGGACCTCAGAG----------CTCCTGGGGGCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCT s panTro4.chr3_GL389630_random 41674 101 - 103936 CTGACCAGCAAGAGGGACAGTGTCCCAGCCAGCCTGATCCCACCGTCTGGCCCCCAGAG----------CTCCTGGGGGCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3_random 187275 101 - 20583478 CTCACCAGCAAGAGGGACAGTGTCCCAGCCAGCCTGATCCCACTGTCTGGCCCCCAGAG----------CCCCTGGGGGCCCTCCTGCCTATTTTCCAAGCCTGCTGTCCT i ponAbe2.chr3_random C 0 n 0 s nomLeu3.chr11 2852083 101 - 123690457 CTGACCAGCAAGAGGGACAGTGTCCCAGCCAGCGTGATCCCATTGTCTGGCCCCCAGAG----------CCCCTGGGGGCCCTCCTGCCTATTTTCCAAGCCTGCTCTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100445 111 - 111706 CTCACCAGCAAGAGGGACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGGCCCCCAGAGCCCCCGCACTCCCCTGGGGGTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413874 111 - 192460366 CTCACCAGCAAGAGGGACCGTGTCCCAGCCAGCGTGGTCCCACTGTCTGGCCCCCAGAGCCCCCGCACTCCCCTGGGGGTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187335138 111 + 187378091 CTCACCAGCAAGAGGGACCGTGTCCCAGACAGCGTGGTCCCACTGTCTGGCCCCCAGAGCCCCCGCACTCCCCTGGGGGTCCTCCTGCCTATGTTCCAAGCCTGCTGTCCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91360115 110 + 91754291 CTCACCAGCAAGAGGGACCGTGTCCCAGCCAGCGTGACCCCACTGTCTGG-CCCCAGAGCCCCCGCACTCCCCTGGGGGTCCTCCTGCCTATGTTCCGAGCCTGCTGTCCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73840801 100 + 74750902 CTGACCAGCAAGAGTGACCGTGTCCCAGCCAGCGTGTTCCCGCTGTCTGG-CCCCAGAG----------CCCCTGGGGGTTCTCCTGCCTATGTCCCAAGCCTGCTGTCCT i calJac3.chr17 I 800 C 0 s mm10.chr16 32787368 58 + 98207768 -----CGGCAAGAG-GACAGTGTCCTAGGAAGCAT-------------------------------------------GTCTTTATGCTTGT----CAAAGCTGCTCTTCT i mm10.chr16 C 0 C 0 e canFam3.chr33 2322759 8 - 31377067 I a score=208780.000000 s hg38.chr3_KI270937v1_alt 63379 73 + 165607 GGCATTGCTTTGA-TTCTATGCACTCTGGGACGCTG-CCAACAAATCCCCCTTTTACTTACGACAGACAGA-----GGTT s panTro4.chr3_GL389630_random 41775 73 - 103936 GGCATTGCTTTGA-TTCTATGCACTCTGGGACACTG-CCAACAAATCGCCCTTTTACTTACGACAGACAGA-----GGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381037 80 - 202140232 GGCATTGCTTTGATTTCTATGCATTCGGGGACGCTGCCCAACAATTCCCATTTTAATTTACGACAGACAGACAGAGGGTT i ponAbe2.chr3 M 20226 C 0 s nomLeu3.chr11 2852184 73 - 123690457 GGCATTGCTTTGA-TTCTATGCACTCTGGGACGCTG-CCAGCAAATCCCCCTTTTACTTATGACAGACAGA-----GGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100556 72 - 111706 GGCATTGCTTTGA-TTCTATGCACTCTGGGAC-CTG-CCAACAAATCCCCCTTTTACTTATGACAGACAGA-----GGTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192413985 72 - 192460366 GGCATTGCTTTGA-TTCTATGCACTCTGGGAC-CTG-CCAACAAATCCCCCTTTTACTTATGACAGACAGA-----GGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187335249 72 + 187378091 GGCATTGCTTTGA-TTCTATACACTCTGGGAC-CTG-CCAACAAATCCCCCTTTTACTTATGACAGACAGA-----GGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91360225 72 + 91754291 GGCATTGCTTTGA-TTCTATGCACTCTGGGAC-CTG-CCAACAAATCCCCCTTTTACTTATGACAGACAGA-----GGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73840901 71 + 74750902 GGCATTCCTTTGA-TTCTATGCACTC--AGACCCTG-CCAACAAATCCCCCTTTTACTCATGACAGACAGA-----GGTC i calJac3.chr17 C 0 C 0 s mm10.chr16 32787426 63 + 98207768 GCCATTCCTTTGC-TTCTGTGCA-TCTGGGGTTCTC----------TCTCCCCTTGTTTGCAAAGCAAAGA-----GCTT i mm10.chr16 C 0 I 440 e canFam3.chr33 2322759 8 - 31377067 I a score=1162775.000000 s hg38.chr3_KI270937v1_alt 63452 465 + 165607 TTCTTTCGCCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCT-GCTAAGGGCAATCATTCCACCTGTCCAGCCTGGCTAT-GAACTCTACACCTGGCATAAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTGTCCCATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTGTCAAAGAGGCAATCCACATTAGACTGTGCACTGGGCCTGTTTTCAC-GGTTACATCTGTGAGCAGAGCTTAGACACTTCCCATCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTGAGGCCAGGCCCGTGACATCTGCA s panTro4.chr3_GL389630_random 41848 465 - 103936 TTCTTTCGCCTGCAACAAAGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCT-GCTAAGGGCAATCAGTCCACCTGTCCAGCCTGGCTAT-GAACTCTACACCTGGCATAAGTCCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTCAGCAGTGTGGCACCCATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTGTCCCATTGACTGTGAGAGGTGCTGAATGCAAGCTTCAGGTATTAGCAAGGGCACTGTCAAAGAGGCAATCCACATTAGACTATGCACTGGGCCTGTTTTCAC-GGTTACATCTGTGAGCAGAGCTTAGACACTTCCCATCATGCCCCATCTGCTACTTTGTACCACACATTAGGAGAACAACCCACCCCTCAGTGAGGCAAGGCCCGTGACATCTGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381117 409 - 202140232 TTCTTTCGCCTGCAACAAGGGATCCCACTCTCCACGGACATATCTTGCTTCCCTCTGGTTAAGGGCAATCATTCCACCTGTCCAGCCTGGCTAT-GAACTCTACACCTGGCATAAGACCCCCAGCCAGCATTTTTGCCAGGTTTACCC-TGCAAGGGATGACAGGAAGCCTGAGCCACTTTTAAGCGGTGCAGCACCCATTGACTGTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCAGATATTAGCAAGGGCACTGTCAAAGAGGCAATCCACATCAGACTGTGCACTGGGCCTGTTTTCAC-GGTCACATCTGTGAGCAGAGCTTAGACACTTCCCATCATGCCCCATCTGCTACTTTGTACCACACAGTAGGAGAACCAGCTACCCCTCAGCGACGCCAGGCCCGTGACATCTGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2852257 409 - 123690457 TTCTTTCGCCTGCAACAAAGGAGCCCACTCTCCACGGACATATCTTGCTTCCGTCT-GCTAAGGGCAATCACTCCACCTGTCTAGCCTGGCTGT-GAACCCTACACCTGGCATAAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAGGAAGCCTGAGCCACTTTTAAGCGGTGCGGCACCCATTGACTCTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCAGGTATCAGCAAGGGCGCTGTCAAAGAGGCAACCCACATTAGACTCTGCACTGGGCCTGTTTTCAC-GGTCACATCTGTGAGCAGAGCTTAGACACTTCCCATCATGCCCCATCTGCTACTTTGTACTGCACAGTAGGAGAACCACCGCCCCCTCAGCAAGGCCAGGCCCGTGACATCTGCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 100628 410 - 111706 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGATGTATCTTGCTTCCCTCT-GCAAAGGGCAATCACTTCACCTGTCCAGCCCGGCTAT-GAACTCTACACCTGGCATGAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAATAAGCCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCGGGTACTGACAAGGGCACTGCCAAAGAGGCAATCCACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACGTTTGTGAGCAGAGCTTAGATACTTCCCGTCATGCCCCATCTGCTACTGTGTACCGCACAGCAGGAGAACCACCCGCCCCTCAGCGAGGCCAGGCCCGTGAAATCTGCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192414057 410 - 192460366 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACAGACGTATCTTGCTTCCCTCT-GCAAAGGGCAATCACTTCACCTGTCCAGCCCGGCTAT-GAACTCTACACCTGGCATGAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAATAAGCCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCGGGTACTGACAAGGGCACTGCCAAAGAGGCAATCCACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACGTTTGTGAGCAGAGCTTAGATACTTCCCGTCATGCCCCATCTGCTACTGTGTACCGCACAGCAGGAGAACCACCCGCCCCTCAGCGAGGCCAGGCCCGTGAAATCTGCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187335321 410 + 187378091 TTCTTTCGCCTGCAACAAAGGATCCCATTCTCCACGGACGTATGTTGCTTCCCTCT-GCAAAGGGCAATCACTTCACCTGTCCAGCCCGGCTAT-GAACTCTACACCTGGCATAAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAATAAGCCTGAGCCACTTTTAAGTGGTACGGCCCCCATTGACTGTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCGGGTACTGACAAGGGCACTGCCAAAGAGGCAATCCACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACGTTTGTGAGCAGAGCTTAGATACTTCCCGTCATGCCCCATCTGCTACTGTGTACTGCACAGCAGGAGAACCACCCGCCCCTCAGCGAGGGCAGGCCTATGAAATCTGCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91360297 410 + 91754291 TTCTTTCACCTGCAACGAAGGATCCCACTCTCCACGGACGTATCTTGCTTCCCTCT-GCAAAGGGCAATCACTTCACCTGTCCAGCCCGGCTAT-GAACTCTACACCTGGCATAAGACCCCCAGCCAGCATCTCTGCCAGGTTTACCCTTGCAAGGGATGACAATAAGTCTGAGCCACTTTTAAGTGGTACGGTACCTATTGACTGTGAGAGGTGCTAAATG--------------------------------------------------------CAAGCTTCGGGTACTGACAAGGGCACTGCCAAAGAGGCAATCCACGTTAGACTGTGTACCGGGCCTGTTTTCACTGGTCACGTTTGTGAGCAGAGCTTAGATACTTCCCGTCATGCCCCACCTGCTACTTTGCACCGCACAGCAGGAGAACCATCCTCCCCTCAGCGAGGCCAGGCCCATGAAATCTGCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73840972 390 + 74750902 TTCCTTTGCCTGCAACAATGGGTCCCACTCTCAACGGACATATCTTGCTTCTGTCT-GCTAAGGGCAATCATTTCA-CTGTCCAGCCTGGCTAT-GAATTCTGCACCTGGCATAAGACCCCCCCACAATATCTCTGCCAGGATTACCCTTGCAAGGGATGACAGTAAGCCTGAGCCACTGATAAGCACTGTAGCACCCATGGACTGTGAGAGGTGCTAAACG--------------------------------------------------------CAAGCTCTGGGTACT-GCAAGGGCACCGTCAAAGAGGCCA-CCACGTTAGGCTCTATACTGGGCCTGTTTTCCGTGGTCACATCTGTGAGCAGAGC--------------TCATGCTCCCTCTGCTGCTTTGTACCGCACAGTGGGAGAACCATCCATGCCTCAGAGAGGCC---TCAGTGAAATCTGCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32787929 335 + 98207768 TTCTTTTGCATTCACCGAGGGATCCTTCTGGCAGGGATAACAGCAACTTCCGCTCT-G-TAAGGGCAACCACCTCACCTGTCTATTCTGGCAGCAGGACTGTACCCCTAACAGAAG-CTGCTGGTCTGCCCCTCGTCAGGGTCTATTCCTTTACTAGGTggcatggagcatgaacta----------atgtgactctcactgactatggaaggtgctggctg---------------------------------------------------------aagtctgagacatttgccagagtagggtggagaagcCA--TTATCTTAGGTGGTGCACCAGGTCTAGCCTCACTGTTCAC-------AGTACAGGTT--------------------------------------------CACGAGA---------CCAGCACTGA-GCTAGGCCTGTGACATTTATA i mm10.chr16 I 440 C 0 e canFam3.chr33 2322759 8 - 31377067 I a score=741264.000000 s hg38.chr3_KI270937v1_alt 63917 251 + 165607 CTGAGCTGACCCAGTCTAACC-TCCAACAAGCCACACCATCCCCA--------------------------------------------TCCTC-AAAACCCTGACCCCGGAACTTTACCATTGGAAGTTCTATCCAG-----TGGGTTTTAGGAGAATTTTCCCAACTTG---TACAAATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGCGG--TTTTTTCTGCCTAGCCTCCCTATTTTCT-TGGGGCTCATCCTTC---CT-CTATGGGATCCTGACTGGGTTGTCAGTCAT----------------------------------------------------------------------------------------------GGTGAC s panTro4.chr3_GL389630_random 42313 251 - 103936 CTGAGCTGACCCAGTCTAACC-TCCAACAAGCCACACCATCCCCA--------------------------------------------TCCTC-AAAACCCTGACCCCGGAACTTTACCATTGGAAGTTCTGTCCAG-----TGGGTTTTAGGAGAATTTTCCCAACTTG---TACAAATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGGGG--TTTTTTCTGCCTGGCCTCCCTATTTTCT-TGGGGCTCATCCTTC---CT-CTATGGGATCCTGACTGGGTTGTCAGTCAT----------------------------------------------------------------------------------------------GGTGAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381526 251 - 202140232 CTGAGCTGACCCAGTCTAACC-TCCAACAAGCCACACCATACCCA--------------------------------------------TCCTC-AAAACCCTGACCCCGGAACTTCACCATTGGAAGTTCTGTCCAG-----TGGGTTTTAGGATAATTTTCCCAACTTG---TAGAAATACATCCCAATCATGGTCCTCATCTAGAGTATACATCTCTGGGG--TTTTTTCTGCCTAGCCTCCCTATTTTCT-TGGAGATCATCCTTC---CT-CTATGGGATCCTGATTGGGTTGTCAGTCCT----------------------------------------------------------------------------------------------GGTGAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2852666 252 - 123690457 CTGAGCTGACGCAGTCTAACC-TCCAACAAGCCACACCATCCCCA--------------------------------------------TCCCC-AAAACCCTGACCCCGGAATTTCACCATCGGAAGTTCCGTCCAG-----TGGGTTTTAGGAGAATTTTCCCAGCCTG---TGCAAATACATCCCAGTCATGGTCCTCATCTACAGTGCCCATCTCTGGGG--ATTTTTCTGCCCAGCCTCCCTATGTTCT-TGGGGCCCATCCTTC---CTCCTGTGGGATCCTGATTGGGTTGTCAGTCAT----------------------------------------------------------------------------------------------GGTGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101038 296 - 111706 CGGAGCTGACCCAGCCTAACCTTCCAACAGGCCACAGCATCCGCATCCCCGAGAGCCCAGGCCCCGGGATTTCAGCCACACCACCCCCTTCCCCGAGAGCCCAGGCCCCGGGATTTCACCATCGGAAGTTCTGTCCAG-----TGGGCTTCAGGAGAATTTTCCCAACTTG---TACAAATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGGGG---TTTTTCTGCCTAGCCTCCCTGTTTTCT-TGGGGCTCGTCCTTC---CT-CTATGGGATCCTGATTGGGTAGTCAGTCGT----------------------------------------------------------------------------------------------GATGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192414467 252 - 192460366 CGGAGCTGACCCAGCCTAACCTTCCAACAGGCCACAGCATCCGCA--------------------------------------------TCCCCGAGAGCCCAGGCCCTGGGATTTCACCATCGGAAGTTCTGTCCAG-----TGGGCTTCAGGAGAATTTTCCCAACTTG---TACAAATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGGGG---TTTTTCTGCCTAGCCTCCCTGTTTTCT-CGGGGCTCGTCCTTC---CT-CTATGGGATCCTGATTGGGTTGTCAGTCGT----------------------------------------------------------------------------------------------GATGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187335731 252 + 187378091 CGGAGCTGACCCAGCCTAACCTTCCAACAGGACACAGCATCCGCA--------------------------------------------TCCCCGAGAGCCCCGGCCCCGGGATTTCACCATCGGAAGTTCTGTCCAG-----TGGGCTTCAGGAGAATTTTCCCAACTTG---TACAAATGCCTCCCAATCTTGGTCCTCATCTAGGGTGTACATCTCTGGGG---TTTTTCTGCCTAGCCTCCCTGTTTTCT-CTGGGCTCATCCTTC---CT-CTATGGGATCCTGATTGGGTTGTCAGTCGT----------------------------------------------------------------------------------------------GATGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91360707 296 + 91754291 TGGAGCTGACCCAGCCTAACCTTCCAACAAGCCACAGCATCCGCATCCCCGAGAGCCCCAGTCCCGGGATTTCAGCCACACCATCCGCATCCCCGAGAGTGCTGGCCCCGGAATTTCACCATCGGAAGTTCTGTCCAG-----TGGGCTTCAGGAGAATTTTCCCAACTTG---TACAAATGCCTCCCAATCTTGGTCCTCATCTAGAGTGTACATCTCTGGGG---TTTTTCTGCCTAGCCTCCCTGTTTTCT-CGGGGCTCATCCTTC---CT-CTATGGGATCCTGATTGGGTTGTCAGTCGT----------------------------------------------------------------------------------------------GGTGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841362 342 + 74750902 CTGAGCTGGCCCGGTCTAACCCTCCAGCAAGCCGCACCATCCCCA--------------------------------------------------GACGCCCTGACCC-AGAATTTCACCCTTGGAAGTCCTGTCCTG-----CGGGTTTTAGGAGAATTTTCCCGACTTG---TATAACTCCATCCCAATCTCCGTCCCCATCTGGAGTGTACATCTATGGGCTTTTTCTTCTGCTTCACCTCCCGCTTTCCT-TGGGGCTCATCCTTC---CT-CTGTGGGACCCTGATTGGGTTGTCAGTCAGTTTTTTGGTTTGTTTTTTAATTGCTTTCTTCTTTTAGTGGGAAGCAGACACAGGGTGGGAGGCAGTGCGACACCTCCTGGTGAGAACCAGGATAAGTGGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32788264 229 + 98207768 CTGAACTGACCCAGTCTAGTCTTCCAATCATTCATAGCATCCCCA--------------------------------------------------AGAGCCTTGACCCCAGAATTTTACTAATGG--------TCTAG-----GAA----TAAAAGAATTTCTCCAGATTGGTATTCAAAGACACCACAATCTTCCTCTTTGCCTGGAGCATATCTCCAAGGGG----TTTTATATCTAGCATCCCTATTTCAT------GTCTTTTCCC---AT-TTATGATGTGTT--TTGAGATGTAAATCAC----------------------------------------------------------------------------------------------AGTGGC i mm10.chr16 C 0 I 1147 s canFam3.chr33 2322767 255 - 31377067 CTGAGCTGCGCTAGTCTGATCCCCCACTGACTCACACCATTCCCA--------------------------------------------------AAAGCTCTGCCCCTGGATTTCGGACCCTGGGACCTTTGTCCTGTGATCTGGGTCTTAGGGGAATTTTCCCAACTTA---TACAAATATGTCCCAATCTTGGTCCTCATCTAGAACATGCATCCATGGGT---ATTTTCTGCCTGGCATCCCCAGCGCCTCTGAGGCCTGTCCTTCTCATT-CCACGTGGTTCATTTTGAGCTGTCAGTCAT----------------------------------------------------------------------------------------------GGTGGC i canFam3.chr33 I 8 C 0 a score=183185.000000 s hg38.chr3_KI270937v1_alt 64168 54 + 165607 CCTTGCAGGCCATGGAGACCTGCACTTCCCCAG-ATGACATGAAAATTTGGGGAG s panTro4.chr3_GL389630_random 42564 54 - 103936 CCTTGCAGGCCACGGAGACCTGCGCTTCCCCGG-ATGACATGAAAATTTGGGGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381777 54 - 202140232 CCTTGCAGGCCACGGAGACCTGCTCTTCCCCGG-ATGACATGAAAATTTGGGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2852918 54 - 123690457 CCTTACAGGCCACGGAGACCTGCTCTTCCCCGG-ATGACATGAAAATTTGGGGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101334 54 - 111706 CCTTGCAGGCCACGGAGACCTGCCCTTCCCCGG-ATGACATGAAAATTAGGGGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192414719 54 - 192460366 CCTTGCAGGCCACGGAGACCTGCCCTTCCCCGG-ATGACATGAAAATTAGGGGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187335983 54 + 187378091 CCTTGCAGGCCATGGAGACCTGCCCTTCCCCGG-ATGACATGAAAATTTGGGGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361003 54 + 91754291 CCTTGCAGGCCACGGAGACCTGCCCTTCCCTGG-ATGACATGAAAATTTGGGGAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841704 54 + 74750902 CCTTCCAGGCTAAGGAGACCTTTCCTTCCCTGG-GTGACATGAAAATTTGGGGAG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2323022 55 - 31377067 CCTTGCAGACCAGTAAGATCAGTCTTTCCCTAGTATAATATGCAGATCTTGGGAG i canFam3.chr33 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I a score=13022.000000 s hg38.chr3_KI270937v1_alt 64222 6 + 165607 AGGGgg s panTro4.chr3_GL389630_random 42618 6 - 103936 AGGGgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381831 6 - 202140232 AAGGgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2852972 6 - 123690457 AGGGgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101388 6 - 111706 AGGGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192414773 6 - 192460366 AGGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336037 6 + 187378091 AGGgcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361057 6 + 91754291 AGGGGC i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2323077 6 - 31377067 AGGGAG i canFam3.chr33 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I e calJac3.chr17 73841758 0 + 74750902 C a score=722295.000000 s hg38.chr3_KI270937v1_alt 64228 338 + 165607 ccgggtgcggtggctcatgtctgtaatcccagcactttgggaggccaagacgggtggatcacgaggtcaggagattgagactattctggctaacacggtgaaaccccgtctctactaaaaaaaaaaacataaaaattagttgggcgtggtggcgggcgcctgtagtcccagctactt-gggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcgcaccactgcactccagcctgggcgacagagcgagacttcgtctc----aaaaaacaaaaagaaaga-aagaaaaagaaaAAA-----GAAAAGAAAATGTGGGGAGAT s panTro4.chr3_GL389630_random 42624 337 - 103936 ctggacgcggtggctcatgtctgtaatcccagcactttgggaggccaagacgggtggatcacgaggtcaggagattgagactatcctggctaacacggtgaaaccccgtctctact-aaaaaaaatacataaaaattagtcgggcgtggtggtgggcgcctgtagtcccagctactt-gggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagctgagatcgcgccactgcactccagcctgggtgacagagcgagacttcgtctc----aaaaaacaaaaagaaaga-aagaaaaagaaaAAA-----GAGAAGAAAATTTGGGGAGAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2381837 339 - 202140232 cctggcgcggtggctcacacctgtaatcccagcactttgggaggccaagacgggcggatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccctgtctctactaaaaaaaaaaacataaaaattagccgggcgtggtggcaggcgcctgtagtcccagctactc-gggaggctgaagcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccaagatcacgccactgcaccctagcctgggcgacagagcaagacttcgtctc----aaaaaaaagaaagaaagagaaagaaaaaaGAAAA-----GAAAAGAAAATTTGGGGAGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2852978 343 - 123690457 ccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccaagacgggcagatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccccgtctctact-aaaaaaaatacaaaaaaaatagccgggtgtggtggcgggcgcctgtagtcccagctactg-gggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcaatgagctgagattgtgccactgcactccagcctgggcaacagagcgagactttgtctc---aaaaaaaaaaaaagaaaga-aagaaacagaaAAAAGAAAGGAAAAGAAAATTTGGGGAGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101394 326 - 111706 ccaggcgtggtggctcacacctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctact--aaaaaaatacaaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcgggggggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgaggtcacaccactgcactccagcctgggcaacagagcgagacttcatctc----aagaaaaaaaaagagaga-----------gagaa-----gaaaagaAAAGTTGGGGAGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192414779 326 - 192460366 ccaggcgtggtggctcacacctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctact--aaaaaaatacaaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcgggggggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagtcgaggtcacaccactgcactccagcctgggcaacagagcgagacttcatctc----aagaaaaaaaaagagaga-----------gagaa-----gaaaaGAAAAGTTGGGGAGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336043 328 + 187378091 ccaggcgtggtggctcacacctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctggcgaacacggtgaaaccccgtctctact----aaaaatacaaaaaaactagccgggtgtggtggc-ggcgccttcagtcccagctactcggggaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaagagaga-----------gaaaa-----gaaaagaaaagttgggGAGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361063 325 + 91754291 ccaggcgcagtggctcacgcctgtaatcccagcactttgggaggccgagatgggcaaatcatgaggtcaggagattgagaccatcctggctaacatggtgaaaccccatctctact--aaaaaaatacaaaaaaattagccaggcgtggtggc-ggcgcctgtagtcccagctactcggggaggctgaggcaggaaaatggcgtgaacccgggaggcagagcttgcagtgagccgaggtcacaccactgcactccagcctcggcgacagagcgagacttcatctc----aag-aaaaaaaagagaga-----------gagaa-----gaaaagaaAAGTTGGGGAGAG i chlSab2.chr15 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I e calJac3.chr17 73841758 0 + 74750902 C e canFam3.chr33 2323083 0 - 31377067 C a score=13752.000000 s hg38.chr3_KI270937v1_alt 64566 4 + 165607 GGAA s panTro4.chr3_GL389630_random 42961 4 - 103936 GGAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2382176 4 - 202140232 GGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2853321 4 - 123690457 GGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101720 4 - 111706 GGAA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415105 4 - 192460366 GGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336371 4 + 187378091 GGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361388 4 + 91754291 GGAA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841758 4 + 74750902 GGAA i calJac3.chr17 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I e canFam3.chr33 2323083 0 - 31377067 C a score=120997.000000 s hg38.chr3_KI270937v1_alt 64570 37 + 165607 GTCCCTTGTGAATCTATGGCTAACAAggctgcctttt s panTro4.chr3_GL389630_random 42965 37 - 103936 GTCCCTTGTGAATCTATGGCTAACAAggctgcctttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2382180 37 - 202140232 GTGCCTTGTGAATCTGTGGCTAACAAGGCTGCCTTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2853325 37 - 123690457 GTGCCTTGTGAATCTACGGCTAACAAGGCTGCCTTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 101724 37 - 111706 GTGCCTTGTGAATCTATGGCTAACAAAGCTGCCTTTT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415109 37 - 192460366 GTGCCTTGTGAATCTATGGCTAACAAAGCTGCCTTTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336375 37 + 187378091 GTGCCTTGTGAATCTATGGCTAACAAAGCTGCCTTTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361392 37 + 91754291 GTGCCTTGTGAATCTATGGCTAACAAGGCTGCCTTTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841762 37 + 74750902 GTGCCTCGTGAATCTAGGGCTAACAAGGCCGCCTTTT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2323083 34 - 31377067 GTGCCT-ATGACTC--GGGCTGTCACAGCCAACTTTC i canFam3.chr33 C 0 C 0 e mm10.chr16 32788493 1147 + 98207768 I a score=501606.000000 s hg38.chr3_KI270937v1_alt 64607 156 + 165607 catacacatgaagaaagactctgaagaatgaa-gggagtaaagctaagacagggaaagaaagagaaagtccctgtgatggcgttggagctgctggatccagcc-gt-actgaagct-gaagagacacttgtaggtttctcagaccttgcctttttttttt s panTro4.chr3_GL389630_random 43002 156 - 103936 catacatatgaagaaagactctgaagaatgaa-gggagtagagctaagatagggagagaaagagaaagtccccgtgatggcattggagctgctggatccagcc-gt-actgaagct-gaagagacacttctaggtttctcagACCCTGCCTTTTTTTTTT i panTro4.chr3_GL389630_random C 0 I 2346 s ponAbe2.chr3 2382217 153 - 202140232 CATACATATGAAAAAAGACTCTGAAGAATGAA-GGGAGTAGAGGT---ACAGGGAgagaaagagaaaatccccatgatagtgttggagctgctggatccagcc-at-actgaagct-gaagagatgcttctaggtttctcagaccttgcctttttgtttg i ponAbe2.chr3 C 0 I 3 s nomLeu3.chr11 2853362 154 - 123690457 CATACATATGAAGAAAGACTC--AAGAATgaa-gggagtagagctaagacagcgagagaaagagaaagcccccgtgatcgcgttgaagctgctggatccagcc-gt-actgaagct-gaagagaagcttctaggttcctcagaccttgcttttttttttt i nomLeu3.chr11 C 0 I 7 s rheMac3.chrUn_JH291127 101761 154 - 111706 CATACATATAAAGAAAGACTCTGAAGAATgaa-gggagtagagctaagacggggagagaaagagaaaatccccgtgatcacctttgagttgccggatccagcc-at-actgaagct-gaggagatgcttctaggtttctcagaccttgcc--tttttttt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415146 156 - 192460366 CATACATATAAAGAAAGACTCTGAAGAATgaa-gggagtagagctaagacggggagagaaagagaaaatccccgtgatcacgtttgagttgccggatccagcc-at-actgaagct-gaggagatgcttctaggtttctcagaccttgcctttttttttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336412 157 + 187378091 CATGCATATAAAGAAAGACTCTGAAGAATGAAGGGGAGTAGAGCTAAGACggggggagaaagagaaaatcccCGTGATCGCGTTTGAGCTGCTGGATCCAGCC-AT-ACCGAAGCT-GAGGAGATGCTTCTAGGTTTCTCAGaccttgccttttttttgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361429 153 + 91754291 CATACATATGAAGAAAGACTCTGAAGAATgaa-gggagttgagctaagacagggagagaaagagaaaatccccgtgatcgcgtttgagttgccggatccagcc-at-actgaagct-caggagatgcttctaggtttcttagaccttgcc---ttttttt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841799 152 + 74750902 CATATGCATGAAGAAagact--gaagaataaa-gggagtacagctgaggcagggagagaa--agaaaatccccacggccacatctgagctgcagggtccagcc-ataactgaaggtggaagagactcttccaggtttctcagagcttgcctgtttttt-- i calJac3.chr17 C 0 C 0 s mm10.chr16 32789640 147 + 98207768 CATATGTAtggagaaagtccatgaagaatgaa-gggcacagagct------gagtgggacagaggaaatctc-atgattgtgtttgcactgctggctccagctgac-tccaaagctggaggagccacctgtagatttctcagaccttgacttttcc---- i mm10.chr16 I 1147 C 0 s canFam3.chr33 2323117 151 - 31377067 CTTACATATGGAGAGAGATTCTGAACAACGAa--------gagctaagagaggtaaagaaagagaaaacccggatgagcgcatctgagctgctggatccagcc-agaactgaagcttgaacagtcacttctaggtgtctcagccactaccttcccttttc i canFam3.chr33 C 0 C 0 a score=360692.000000 s hg38.chr3_KI270937v1_alt 64763 138 + 165607 ttttttgcataaactgctctgacttgggtttctgccacttgcaaccaagagtccGACCTACCCTCCCATCAGTATCACTGACCTTTGCCTCAGAGGCCAGAAGGCC-AAGCTTCCAAGGACCAGAAGAA----ACTGGGGGCT s ponAbe2.chr3 2382373 138 - 202140232 gtttttgcataaactgctctcacttgggtttctgccacttacaaccaagagtccGGCCTCCCCTCCCATCAATATCACCGACCTTCGCCTCAGGGGCCAGAAGGCC-AAGCTTCCAAGGACCAGAAGAA----ATTGGGGGCT i ponAbe2.chr3 I 3 C 0 s nomLeu3.chr11 2853523 138 - 123690457 ttttttgcataaactgctctgacttgggtttctgccacttgcaaccaagagtccggcctaCCCTCCCATCAATATCACTGACCTTCACCTCAGGGGCCAGAAGGCC-AAGCTTCCCAGGACCAGAAGAA----ATTGGGGGCT i nomLeu3.chr11 I 7 C 0 s rheMac3.chrUn_JH291127 101915 135 - 111706 tttttttcataaactgctctgacttgggtttctgccacttacaaccaagagtcctgcctaC-CTCCCATCAATATCACTGACCTTCTCCTCAGGGGCCAG--GGCC-AAGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i rheMac3.chrUn_JH291127 C 0 I 19 s macFas5.chr2 192415302 135 - 192460366 tttttttcataaactgctctgacttgggtttctgccacttacaaccaagagtcctgcctaC-CTCCCATCAATATCACTGACCTTCTCCTCAGGGGCCAG--GGCC-AAGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i macFas5.chr2 C 0 I 6 s papAnu2.chr2 187336569 136 + 187378091 tttttttcataaaCTGCTCTGACTTGGGTTTCTGCCACTTACAACCAAGAGTCCTGCCTACGCTCCCATCAATATCACTGACCTTCTCCTCAGGGGCCAG--GGCC-AAGCTTCCAAGGACCAGAAGAA----ATTGGGGGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361582 136 + 91754291 tttttttcataaactgctctgacttgggtttctgccacttacagccaagagtcctgcctaCTCTCCCATCAATATCACCGACCTTCTCCTCAGGGGCCAG--GGCC-AAGCTTCCAAGGACCAGAAGAA----AGTGCGGGTT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73841951 130 + 74750902 ------gtataaaatgctataacttgggtttctgccacttgcaaccaagagtcctgcctaC-CGTCCCTCCGTATCACTGACCATCTCCTCAGGGGCCAGAAGGCC-AAGCTTCCAAGGACCGGAAGAA----GTTGGGGTT- i calJac3.chr17 C 0 C 0 s mm10.chr16 32789787 125 + 98207768 ------aagtaaactaccatgccct-ggttcctgcttcttgcaacccaaaTCTCTGCTTACTTTCCCATTAATATCATTGGCTCTTT----------CAAAAGGCC-TGCACTCCCAAGACCTGAAAAATTGGATCTGGGGCT i mm10.chr16 C 0 C 0 s canFam3.chr33 2323268 132 - 31377067 -----tgtataagctacgatgagttgggtgtctgctccttataaccaa-agtcctgcctaTCTGCCCGTTAATATCATTGATCTTCTCC-CAAGGGATAGAAGGCCTGAACTTCCTATGGCCTGAGGAA----ATTGGGGGCG i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=-4408.000000 s hg38.chr3_KI270937v1_alt 64901 3 + 165607 CCA- s ponAbe2.chr3 2382511 3 - 202140232 CTG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2853661 3 - 123690457 CCG- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192415443 3 - 192460366 TCA- i macFas5.chr2 I 6 I 10 s papAnu2.chr2 187336705 1 + 187378091 --G- i papAnu2.chr2 C 0 I 1 s chlSab2.chr15 91361718 1 + 91754291 --G- i chlSab2.chr15 C 0 I 2 s calJac3.chr17 73842081 3 + 74750902 GCG- i calJac3.chr17 C 0 C 0 s mm10.chr16 32789912 1 + 98207768 --G- i mm10.chr16 C 0 I 3 s canFam3.chr33 2323400 3 - 31377067 -AGG i canFam3.chr33 C 0 C 0 e rheMac3.chrUn_JH291127 102050 19 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=379557.000000 s hg38.chr3_KI270937v1_alt 64904 188 + 165607 GGAGTCACAAGTTTACATTGCAGAGAA-GGAAAT-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGATCCTCAGATTCAGCTCCCAATTCTCCGTAAGAAACGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCTGCGGGTCTTCCCTGCAGCCCCTGCGAACCTCGCCCC s ponAbe2.chr3 2382514 183 - 202140232 GGAGTCACGTGTTTACATTGCAGAGAA-GGAAAT-TAAGAACTCGGAGCAGCAA--CAGAAGCAAAGCCAGGC--AGATCCTCAGATTCAGCTCCTAATTCTCCATAAGAAACGAGACTCCCTTCCAAGTGCGGCAGCTGCTGTTCTGTGCCCTGTGGGTCTTCCCAGCAGCCCCTGCG-ACCTCGCCCC i ponAbe2.chr3 C 0 I 410 s nomLeu3.chr11 2853664 186 - 123690457 GCAGTCACGTGTTTACATTGCAGAGAA-GGAAAT-GAAGAACTCGGAGAAGGCA--CAGAAGCAAAGCCAGGCAGAGACCCTCAGATTCAGCTCCTAATTATCCGTAAGAAACGAGACTCCCTTCCAAATGTGGTAGCTGCTCTTCTGTGTCCTGCGGGTCTTCCCGGCAGCCCCTGCAAACCTCACCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 102069 188 - 111706 GCAGTCATGTGTCTACACTGCAGAGAA-GGAAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGATCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAACGAGACTCCCTTCCAAGTGCGGTAGCTGCGATTCCGTGTCCCGAGGGTCTTCCCGGCAGCCCCTGCAAACCTCACGCC i rheMac3.chrUn_JH291127 I 19 C 0 s macFas5.chr2 192415456 188 - 192460366 GCAGTCATGTGTCTACACTGCAGAGAA-GGAAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGATCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAACGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCCGTGTCCCGCGGGTCTTCCCGGCAGCCCCTGCAAACCTCACGCC i macFas5.chr2 I 10 C 0 s papAnu2.chr2 187336707 188 + 187378091 GCAGTCATGTGTTTACACTGCAGAGAA-GGAAAC-GAAGAACTCGGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGATCCTCCGATGCAGCTCCCAATTCTCTGTAAGAAACGAGACTCCCTTCCAAGTGCGGCAGCTGCTCTTCCGTGTCCCGCGGGTCTTCCCGGCAGCCCCTGCAAACCTCACGCC i papAnu2.chr2 I 1 C 0 s chlSab2.chr15 91361721 188 + 91754291 GCAGTCATGTGTTTACATTGCAGAGAA-GGAAAC-GAAGAACTCAGAGAAGGCAGGCAGAAGCAAAGCCAGGCAGAGATCCTCCGATTCAGCTCCCAATTCTCTGTAAGAAACGAGACTCCCTTCCAAGTGCGGTAGCTGCTCTTCTGTGTCCCGTGGGTCTTCCCGGCAGCCCCTGCAAACCTCACGCC i chlSab2.chr15 I 2 C 0 s calJac3.chr17 73842084 182 + 74750902 GGAGTCGCGTGTTCACATTGCAGAGAA-GGAAAT-GAGGAGCTCGGAGAAGGCCGGCAGAAGC-CAGCCAGGCAGGGGCCTCCTTCCCAAGCCTCC--TTCTCTGTAAG-AGCGAG-CTCCCTTCCATGTGCAGTGGTTGCTCTTTTGTGCCCCGCAGACGTTTCCTGCA-CCCCTGCCAACCTCACACC i calJac3.chr17 C 0 C 0 s mm10.chr16 32789916 158 + 98207768 AGATGTATTTATTCACATGGCAGAAAA-GAGATCAGAAGAACT--GAGAAGCTTGGCGAGATCAAAGCCAGGCA-AGAGCCCCTG-TTCAGCCCT--------------------AATGCCCTTTCA--TGGAGTCATTGACCTCCCTTGCCCTGAAGATGCTCCCTGGAGTTCCCAAGAGACCC----- i mm10.chr16 I 3 C 0 s canFam3.chr33 2323403 96 - 31377067 GAAAGAATCTTTTTACGTAGCACAGAAGGGGAAT-TCCCAACTCAGGAAAAATAGGCAGAAGCCAAGCCAAGCAGATA--------TTTAGTTCCTAATACTCGC------------------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=498168.000000 s hg38.chr3_KI270937v1_alt 65092 167 + 165607 TTCCTCTACTCCCCTGGCCCGGAAAGTGCCCACTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCGGGGAAGCCACACTCAGCCGCAGGAGGAGGAAACCTCCATTTTCACCTGCAAATGGAGAACAGTA--AGATGAAAATCAGggctgg s ponAbe2.chr3 2383107 167 - 202140232 TTCCTCTACTCCCCCCGCCCGGAAAGTGCCCGCTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAAGCCACACTCAGCCTCAGGAGGAGGGAACCTCCATTTTCACCTGCAAATGGAGAACAGTA--AGATCAAAATCAGggctgg i ponAbe2.chr3 I 410 C 0 s nomLeu3.chr11 2853850 167 - 123690457 TTCCTCTACTGCCCTGGCCTGGAAAGTGCCTGCTCACCTGCTGCATCAGCCTTTCTGCCACTCTGGGGTCAGTGAGGTCTTCCAGGGAGGCCACACTCAGTCGCAGGAGAAGGAAGCCTCCATTTTCACCTGCGAATGGAGAACAGTA--GGATGaaaatcagggctgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 102257 167 - 111706 TTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAAATGGAGAACAGTA--AGATGAAAATCAGggctgg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415644 167 - 192460366 TTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAAATGGAGAACAGTA--AGATGAAAATCAGggctgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187336895 167 + 187378091 TTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCCGCATCAGCCTCTCTGCCACTCTGGGGTCACTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTGCATTTTCACCTGCAAATGGAGAACAGTA--AGATGAAAATcagggccgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91361909 167 + 91754291 TTCCTCTACTCCCCTGGCCCAGAAAGTGTCCACTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCCGGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACATTTTCACCTGCAAATGGAGAACAGTA--AGATGAAAATCAGggctgg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73842266 142 + 74750902 TTCCTCTA------------------------CTCACCTGCTGCATCAGCCTCTCTGCCACTCTGGGATTAGTGAGGTCTTCCAGGGAGGCCACACTCAGCCGCAGGAGGAGGAAACCTACGTTTTCACCTGCAGATGGAGGACAGTA--AGATG-AAATTGGGgccag i calJac3.chr17 C 0 C 0 s mm10.chr16 32790074 150 + 98207768 -TCACTTACTCCT-----------GGTGTACATGTACCTGGTTCATCAGCTTCTCTCTGGCGTTGTGCTCAGTGAGGTCCTTAGGGGAGGCCACGGTCAGCCGTACAAGGAGGAAGCCTCCATCTTCACCTAAAAGTTGAGAA----A--AGACCAGAGGCAATGC-AA i mm10.chr16 C 0 C 0 s canFam3.chr33 2323499 166 - 31377067 TTCCTCT---TTCCTGGCCCCGAGAGTGCTCCCTTACCTGCTGCACCAGCCTCTCTGCCACTCTGGGGTCAGTGAGGTCTTCTGGGGAGGCCACACTCAGCCGCAGGAGGAAAAAGCCTCCATCCCCATCTGCGGGTTTAGGAAAGCAGGAGATGAGAACGTGGGTCAG i canFam3.chr33 C 0 I 1536 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=31868.000000 s hg38.chr3_KI270937v1_alt 65259 13 + 165607 gcacagtggctca s ponAbe2.chr3 2383274 13 - 202140232 gcgcagtggctca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2854017 13 - 123690457 gcgcggtggctca i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 102424 13 - 111706 gggcggtggctca i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415811 13 - 192460366 gggcggtggctca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187337062 13 + 187378091 gggcggtggctca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362076 13 + 91754291 gtgtggtggctca i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73842408 13 + 74750902 gtgtggtggctca i calJac3.chr17 C 0 C 0 s mm10.chr16 32790224 13 + 98207768 CCACAGTGACTCA i mm10.chr16 C 0 I 1400 e canFam3.chr33 2323665 1536 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=28022.000000 s hg38.chr3_KI270937v1_alt 65272 13 + 165607 cacctgtcatccc s ponAbe2.chr3 2383287 13 - 202140232 cacctgtaatccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2854030 13 - 123690457 cacctgtcatccc i nomLeu3.chr11 C 0 I 293 s rheMac3.chrUn_JH291127 102437 13 - 111706 cgcctgtaatccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415824 13 - 192460366 cgcctgtaatccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187337075 13 + 187378091 cgcctgtaatccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362089 13 + 91754291 cgcctataatccc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73842421 13 + 74750902 cgcctgttgtccc i calJac3.chr17 C 0 C 0 e mm10.chr16 32790237 1400 + 98207768 I e canFam3.chr33 2323665 1536 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=106804.000000 s hg38.chr3_KI270937v1_alt 65285 51 + 165607 agcactttgggaggcagaggcaggtggatcacctgagatcgggagtttgag s ponAbe2.chr3 2383300 51 - 202140232 agcactttgggaggccaaggcaggtggatcacctgaggccaggagttcgag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2854336 51 - 123690457 agcactttgggaggccgaggcaggtggatcacctgaggttgggagtttgag i nomLeu3.chr11 I 293 C 0 s rheMac3.chrUn_JH291127 102450 51 - 111706 agtactttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415837 51 - 192460366 agtactttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187337088 51 + 187378091 agcactttgggagggcgaggcaggtggatcacctgaggtcaggagttcgag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362102 51 + 91754291 agcactttgggagggcaaggcaggtggatcacctgaggtcaggagttcgag i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73842434 51 + 74750902 agctactcaggaggctcaggtgggaggatcacctgagccctggaggtggag i calJac3.chr17 C 0 I 2048 e mm10.chr16 32790237 1400 + 98207768 I e canFam3.chr33 2323665 1536 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=186649.000000 s hg38.chr3_KI270937v1_alt 65336 121 + 165607 accagcctgaccaacatgga-gaaatcccgtctttactaaaaacac-aaaatgagccgggcatggtggtgtgtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcctgaac s ponAbe2.chr3 2383351 122 - 202140232 accagcctggccagcattgt-gaaaccccatctctactaaaaatacaaaaatcagccaggcgtggtagctcacgcctgtcatcccagctactcaggaggctgaggcaggagagttgcttgaac i ponAbe2.chr3 C 0 I 1833 s nomLeu3.chr11 2854387 121 - 123690457 accagcctgacgaacatgga-gaaaccccgtctttactaaaaatac-aaaatgagccgggcatggtggtgcatgcctgtaatcccagctactcaggaggcggaggcaggagaatcgcctgaac i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 102501 123 - 111706 accagcctggccagcatagtagaaaccctgtctctactaaaaatacaaaaatcagctgggtgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192415888 123 - 192460366 accagcctggccagcatagtagaaaacctgtctctactaaaaatacaaaaatcagctgggtgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187337139 123 + 187378091 accagcctggccagtatagtagaaaccctgtctctactaaaaatacaaaaatcagctgggcgtggtggctcacgcctgtaatcccagctactcaggaggctgaagtgggaggatcacctgagc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362153 122 + 91754291 accagcctggccagcatggt-gaaaccctgtctctactaaaaatacaaaaatcagctggacgtggtggctcacgcctgtcattccagctactcaggaggctgaagtgggaggatcatctgagc i chlSab2.chr15 C 0 C 0 e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=19294.000000 s hg38.chr3_KI270937v1_alt 65457 17 + 165607 ctgggaggcggaggttg s nomLeu3.chr11 2854508 17 - 123690457 ctgggaggcagaggttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 102624 17 - 111706 cctggaggtggaggttg i rheMac3.chrUn_JH291127 C 0 I 857 s macFas5.chr2 192416011 17 - 192460366 cctggaggtggaggttg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187337262 17 + 187378091 ccaggaggtggaggctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362275 17 + 91754291 cctggaggtggaggttg i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=42995.000000 s hg38.chr3_KI270937v1_alt 65474 71 + 165607 tggtgatctgagatcgcagcactacactccaacctgggcaacaagagcgaaactgtctc----------------------aaaaaaaaaaaa s nomLeu3.chr11 2854525 93 - 123690457 tggtgagctgagatcgcagcattacactccagcctgggcaacaagagcgaaactctttctcaaaaaacaaaaaaaaaaaccaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416028 72 - 192460366 cagtgagtcgagatcacgccactgcactccagactgggtgac-agagtgagactccatctc--------------------aaaaaaaaaaaa i macFas5.chr2 C 0 I 737 s papAnu2.chr2 187337279 72 + 187378091 cagtgagtcgaggtcacgccactgcactccggactgggtgac-agagtgagactccatctc--------------------aaaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91362292 72 + 91754291 cagtgagtcgagatcacgccactgcactccagcctgggtgac-agagtgagactccatctc--------------------aaaaaaaaaaaa i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=1092.000000 s hg38.chr3_KI270937v1_alt 65545 2 + 165607 aa s nomLeu3.chr11 2854618 2 - 123690457 aa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187337351 2 + 187378091 aa i papAnu2.chr2 C 0 I 760 s chlSab2.chr15 91362364 2 + 91754291 aa i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=819.000000 s hg38.chr3_KI270937v1_alt 65547 3 + 165607 aaa s nomLeu3.chr11 2854620 3 - 123690457 aaa i nomLeu3.chr11 C 0 C 0 s chlSab2.chr15 91362366 3 + 91754291 aaa i chlSab2.chr15 C 0 I 850 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e papAnu2.chr2 187337353 760 + 187378091 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=101317.000000 s hg38.chr3_KI270937v1_alt 65550 1217 + 165607 aaaagaggaggatgaaatagtcacatatatttgcttccgtatgtacatttcatgtgcagaaaattacacacaagagacaatctcacgggttacatgtgtggagagaa---ctgggtgggggcacagccaggggagaaaggcattttatggtgaaccttttcgtacctttccatttcaaatcatatgaatgtcttatctaatcaacaaataataaaGTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctctgtagaaaggaaagacatgaga--ctccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttaatttgtaactttgccccaaccttgagctcataaaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaagcagtatacttggtagaagtcatcgccattctctagtctcaataaaccaggggcacaatgcactgtggaaagccgcagggacctctgcccttgaaagcagggtattgtccaagctttctccccatgtgatagtctgaaatatggcctcgtgggatgacaaagacctgaccgtcccccaggctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagcctcttgcagttgagctagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcagtataaaacccgattgtacatttgttcaattctgagacaggagaaaaaccaccctgtggcgggaggtgagacatgtttgcagcaatgctgctttattattctttactctgctgagatgtttgggtggagagaaacataaatctggcctacgtgcacatccaggcatagtatcttcccttgaacttaattatgacacagattcttttgctcacatgtttcttgctgaccttctccttattatcaccctgctctcctactacattcctttttgctaaaataatgaaaataataatcaataaaaactgagaaaactcagagactggtgccggtgcaggtccttggtatgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgccttatttcttttctcagtctctcatcccacccgactagaaatacccacaggtgtggaggggcaggccacccc s nomLeu3.chr11 2854623 1212 - 123690457 aaaagaggaggatgaaatagacacatatatttgcttccgtatgtacatttcatatgcagaaaatgacgcacaagaggcaaccccacgggttacatgtgtgaagagaagtgccgggtgggggcacggccagggcagaaagacatttaatggtgtacctttttgtacctttccatttccaatcatatgagtgtcttatctaatcaacaaataaTAA-GTATTTTTCTTTCCagggaaaagaaggagcgatcagactgtcactgtgtctatgtcgaaaggaaagacgtgagagactccattttgaaaaagacctgtactttaaacaagctttgctgagatgttgttaatttgtagctttgccccaacctcgagctcacagaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggacgtgccttgttaacaaaatgtttacaggcagtatacttggtaaaagtcatctccattctctagtctcaataaaccaggggcaccatgcactgtggaaagccgcagggacctctgccctggaaagcgggatattgtcccaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaaagacctgaccgtcccccagcctgacacccgtaaagggtctgtgctgaggtggattagtaaaagaggaaagcctcttgcagttgagagagaggaaggccactgtctcctgcctgcccctgggaactgaatgtctcggtataaaacccgatcgcatatttgctcaattctgagatag---aaaaaccgccctgtggtgggaggcgagacatgttggcagcaatgctgccttgttattctttactccactgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggcatagtaccttcccttgaacttaattatgacatagattcttttgctcacatgttttttgctgacct---ccttattatcaccctgctctcctactacattcctttttgctgaaataatgaaaataataatcaataaaaactgagggaactcagaggccggtgctggtgcaggtccttggtgtgctgagcgccggtcccctgggcccactgttgtttctctatactttgtctctgtgtcttatttcttttct--gtctcttgtcc-acccaactagaaatacccacagctgtggaggggcaggccacccc i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187337353 760 + 187378091 I e macFas5.chr2 192416100 737 - 192460366 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=50190.000000 s hg38.chr3_KI270937v1_alt 66767 95 + 165607 ttcaCTTTCCAGAGCAGTTTAGCTACCAtcttcaaccctgtcagatggggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg s nomLeu3.chr11 2855835 95 - 123690457 ttcaCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatggggtcgtgttacccacctcataaggctgttttgaaggttaaatagagg i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416837 95 - 192460366 TTTTCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCctgtcagatgcggtcgtgttacccacctcctaaggctgttttgaaggttaaatagagg i macFas5.chr2 I 737 C 0 s papAnu2.chr2 187338113 95 + 187378091 TTTTCTTTCCAGGGCAGTTTAGCTACCATCTTTAACCCTGTCAGATGCGGTCGTGTTACCCACCTCCTAAGGCTGTTTTGAAGGCTAAATAGAGG i papAnu2.chr2 I 760 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=1783.000000 s hg38.chr3_KI270937v1_alt 66862 19 + 165607 agataacatatgcaaagct s nomLeu3.chr11 2855930 19 - 123690457 agataacatatgcaaagct i nomLeu3.chr11 C 0 I 24 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338208 0 + 187378091 C e macFas5.chr2 192416932 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=0.000000 s hg38.chr3_KI270937v1_alt 66881 22 + 165607 ggtggcacactgcctggcaTCA e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338208 0 + 187378091 C e macFas5.chr2 192416932 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e nomLeu3.chr11 2855949 24 - 123690457 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=3820.000000 s hg38.chr3_KI270937v1_alt 66903 40 + 165607 TAACATATGCAAAGCTGGTGGCACACTGCCTGGCATCAGA s nomLeu3.chr11 2855973 40 - 123690457 taaCATATGCAAAGCTGGTGGCACACTGCCTGGCATCAGA i nomLeu3.chr11 I 24 T 40 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338208 0 + 187378091 C e macFas5.chr2 192416932 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=3689.000000 s hg38.chr3_KI270937v1_alt 66943 40 + 165607 TAACATATGCAAAGCTGGTGGTACACTGCCTGGCATCAGA s nomLeu3.chr11 2855973 40 - 123690457 taaCATATGCAAAGCTGGTGGCACACTGCCTGGCATCAGA i nomLeu3.chr11 T 40 I 2337 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338208 0 + 187378091 C e macFas5.chr2 192416932 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=0.000000 s hg38.chr3_KI270937v1_alt 66983 77 + 165607 TAACATATGCAAAGCTGGTGGTACACTGCCTGGCatcagataacatatgcaaagccggtggcacactgcctggcaTC e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338208 0 + 187378091 C e macFas5.chr2 192416932 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e nomLeu3.chr11 2856013 2337 - 123690457 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=8954.000000 s hg38.chr3_KI270937v1_alt 67060 19 + 165607 AGATAACATATACAAAGCC s nomLeu3.chr11 2858350 19 - 123690457 agataacatatgcaaagct i nomLeu3.chr11 I 2337 T 2420 s macFas5.chr2 192416932 19 - 192460366 agataacatacacgaagct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338208 19 + 187378091 AGATAACATACACGAAGCT i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=9034.000000 s hg38.chr3_KI270937v1_alt 67079 21 + 165607 GGTGGCACACTGCCTGGCatc s nomLeu3.chr11 2855949 21 - 123690457 gatggcacactgcctggcatc i nomLeu3.chr11 T 2420 C 0 s macFas5.chr2 192416951 19 - 192460366 ggtgg--cactgcctggcatc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338227 19 + 187378091 GGTGG--CACTGCCTGGCATC i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2383473 1833 - 202140232 I e mm10.chr16 32790237 1400 + 98207768 I e calJac3.chr17 73842485 2048 + 74750902 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=546.000000 s hg38.chr3_KI270937v1_alt 67100 1 + 165607 a s ponAbe2.chr3 2385306 1 - 202140232 a i ponAbe2.chr3 I 1833 C 0 s nomLeu3.chr11 2855970 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73844533 1 + 74750902 A i calJac3.chr17 I 2048 C 0 e mm10.chr16 32790237 1400 + 98207768 I e canFam3.chr33 2323665 1536 - 31377067 I e chlSab2.chr15 91362369 850 + 91754291 I e papAnu2.chr2 187338246 0 + 187378091 C e macFas5.chr2 192416970 0 - 192460366 C e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=5829.000000 s hg38.chr3_KI270937v1_alt 67101 23 + 165607 gataacatatgcaaagctggtgg s ponAbe2.chr3 2385307 23 - 202140232 gataacatatgcaaagctggtgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2855971 23 - 123690457 ggtaaCATATGCAAAGCTGGTGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192416970 14 - 192460366 ----acaC-TGC----CTGGCAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338246 1 + 187378091 ----A------------------ i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73844534 23 + 74750902 GAGAGCATATGCAGAGCTGGCGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2325201 23 - 31377067 GGTAACCCCTGCGAAGCTCGCAT i canFam3.chr33 I 1536 C 0 e mm10.chr16 32790237 1400 + 98207768 I e chlSab2.chr15 91362369 850 + 91754291 I e rheMac3.chrUn_JH291127 102641 857 - 111706 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=86662.000000 s hg38.chr3_KI270937v1_alt 67124 41 + 165607 cacactgcctggcacCGGAGAGAACGTTCTGCTGGGGCCAG s ponAbe2.chr3 2385330 41 - 202140232 cacactgcctggcacTGGAGAGAATGTTCACCTGGGGCCGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2855994 41 - 123690457 CACACTGCCTGGCATCAGAGAGAATGTTCAGCTGGGGCCAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103498 41 - 111706 cacaCTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i rheMac3.chrUn_JH291127 I 857 C 0 s macFas5.chr2 192416984 41 - 192460366 CACACTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338247 39 + 187378091 --CACTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363219 41 + 91754291 cacaCTGCCTGGCATCAGAGAGAACGTTCAGCGGGGGCCAA i chlSab2.chr15 I 850 C 0 s calJac3.chr17 73844557 29 + 74750902 ------------CATCAGAGAGAACCTTCAGCTGGTGCCAA i calJac3.chr17 C 0 C 0 s canFam3.chr33 2325224 35 - 31377067 GTTACTGCCTGACGTCAGCAAGCACGCACAGCCGG------ i canFam3.chr33 C 0 C 0 e mm10.chr16 32790237 1400 + 98207768 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=164033.000000 s hg38.chr3_KI270937v1_alt 67165 66 + 165607 TGCTTACTGGGTGTGAAACATGTTTATATCACCCCTGCCTATAACATGAAAGATATTCAATAATAT s ponAbe2.chr3 2385371 66 - 202140232 TGCTTACTGGGTGTGAAACATGTTTATAAAACCCCTGCCTACAATACAAAAGATATTGAATAATAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856035 66 - 123690457 TGCTTACTGGCTGTGAAATGTGTTTATATCACCCCTACCTACAATACAAAAGATATTCAATAATAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103539 66 - 111706 CGCTTACTGGGTGTGAAACATGTTTATATCACCCCTTTCTACAATACAAAAGATATTCAATAATAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417025 66 - 192460366 CGCTTACTGGGTGTGAAACATGTTTATATCACCCCTTTCTACAATACAAAAGATATTCAATAATAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338286 66 + 187378091 CGCTTACTGGGTGTGAAACATGTTTATATCACCCCTTTCTACAATACAAAAGATATTCAATAATAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363260 66 + 91754291 CGCTTACTGGATGTGAAACATGTTTATATCACCCCTGCCTACAATACAAAAGGTATTCAATAATAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73844586 64 + 74750902 CGCTCA-TGGGTGTGAAACGTTTTTATGTCA-CCCTGCCTACAACACAAAAGATACTCAACAATAT i calJac3.chr17 C 0 C 0 s mm10.chr16 32791637 66 + 98207768 TGCCTACTGACTGCAAAGTGTTTTTATATTAATCTTACCTAGAATAAAAAAGATATACAATAACAT i mm10.chr16 I 1400 I 545 s canFam3.chr33 2325259 52 - 31377067 ----TCCTGAGGG-------TTTCTCTCTCACTTCTCCCTGGCACATGAGTGATGTTCGGTAA--- i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=35412.000000 s hg38.chr3_KI270937v1_alt 67231 17 + 165607 CTTTATGTATTGAGTGG s ponAbe2.chr3 2385437 17 - 202140232 CTTTATGTATTGAGTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856101 17 - 123690457 CTTTCTGTACTGAGTGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103605 17 - 111706 CCTTATTTATTGAGTGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417091 17 - 192460366 CCTTATTTATTGAGTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338352 17 + 187378091 CCTTATTTATTGAGTGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363326 17 + 91754291 CTTTATTTATTGAGTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73844650 17 + 74750902 CTTTATTTATTGAGTGG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2325311 5 - 31377067 ------------GGCGG i canFam3.chr33 C 0 C 0 e mm10.chr16 32791703 545 + 98207768 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=594132.000000 s hg38.chr3_KI270937v1_alt 67248 206 + 165607 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGTAACAAGCTGCGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTG--GAGGTGGAGGCTACAGGCTGACCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCAGAGATGTAGCTTTAAACTCCC s ponAbe2.chr3 2385454 208 - 202140232 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGTAACAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGGAAGTGTGGAGGTGGAGGCTACAGGCTGACCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTGAGAAGTCCC----TGTTGCCTCCGAGATGTAGCTTTAAACTCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856118 206 - 123690457 TTGTGATTAATATTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGCGGATA----CACAGAGATGAGGCCCAAGTGCAGAGTGACAGGAAGTG--GAGGTGGAGGCTACAGGCTGACCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAACTTCTCCCCTTTGAAGTCCC----TGTTGCCTCAAAGATGTAGCTTTAAACTCCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103622 209 - 111706 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTG--GAGGTGGAGGCTACAGGCTGGCCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417108 209 - 192460366 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGAATA----CACAGAGATGAGGCCCAAGGGCAGAGTGACAGCAAGTG--GAGGTGGAGGCTACAGGCTGGCCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338369 209 + 187378091 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGATA----CACAGGGATGAGGCCCAAGGGCAGAGTGACAGCAagtg--gaggtggaggctacaggcTGGCCAGAAGCTGGACTGACCAAGCAGCCTCTGACAATGAAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGAGATGTAGCTTTAAACTCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363343 209 + 91754291 CTGTGATTAATGTTTGTATTCCCACCTCCCCCAGAAAGGTGGGAGCAAGCTGTGGACA----CACAGAGATGAGGCCCAAGGGGAGAGCGACAGGAAGTG--GAGGTGGAGGCTACAGGCTGGCCAGAAGCTGGACTGACCAAGCAGCCTCTGACATTGGAC-TCTCCCCTGAGAAGTCCCTGTTTGTTGCCTCAGGGATGTAGCTTTAAACTCCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73844667 199 + 74750902 TTGTGATTAACATTTGTATTCCCACCTCCTCCAGAAAAGTGGGAACAAGCTGTGG--A----CACAGAGATGAGGCCCAAGGACAGAGTGACGGGAGGTG--CAGGTGGAGGCTGCAGG----CCGGAAGCTGGACTGACCAGGCAGCCTCTGGCAACGAGT-CCTCCCCTGAGGAGTCCC----CGTTGCCTGAGAGATAGAGCTTTCAACTCCC i calJac3.chr17 C 0 C 0 s mm10.chr16 32792248 196 + 98207768 tcATGATTAACATTTTTATTCC--CCTTGCCCAAAAAAGTAG-AACAAGGCAAAGATA----CTCAGGAATGCACCATAAGGAGAAGATGA---GCAGTA--GAGGCAGACACTCCA-GCTGCCCACAAGCTGCCCTTACGGGAGAGTTGCTGACAATGCGC---CTCTCTGAGACGCTTC----TGTTGTTTCAGAAATGAAGGTTTAAACTCCC i mm10.chr16 I 545 I 12 s canFam3.chr33 2325316 202 - 31377067 CTGTCGTGGATATTTTTATTTC-ACGTCTCC---ACAGACCAGGGCCAGCTGAGGATAATACCACAGGGACGAGGCCCAAGGACAGTGTCA---GAAGTG--GAGGTGGAGGTTCCAGGCTGGCCAGAAGCTGGGCTGAC-ACGCAGCCTCTGACAAGGGGCTTCTTCCCTGAGAAGTACC----TGTTGTCTCAGACACGTAGCTTTAAACCCCC i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=32785.000000 s hg38.chr3_KI270937v1_alt 67454 16 + 165607 AAGCCTTCGCTGTAtt s ponAbe2.chr3 2385662 16 - 202140232 AAGCCTTCGCCGTATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856324 16 - 123690457 AAGACTTTGCCGTATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103831 16 - 111706 AAGACTTTGCTGTAtt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417317 16 - 192460366 AAGACTTTGCTGTAtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338578 16 + 187378091 AAGCCTTtgctgtatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363552 16 + 91754291 AACCCTTTGCTGTAtt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73844866 16 + 74750902 ATACCTTCACCACGtt i calJac3.chr17 C 0 C 0 s canFam3.chr33 2325518 16 - 31377067 AATCCTTCACCCCATT i canFam3.chr33 C 0 I 100 e mm10.chr16 32792444 12 + 98207768 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=9434.000000 s hg38.chr3_KI270937v1_alt 67470 9 + 165607 t----gcttattt s ponAbe2.chr3 2385678 13 - 202140232 TAtttgtttattt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856340 13 - 123690457 TAtttgtttattt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103847 9 - 111706 tatttgttt---- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417333 9 - 192460366 tatttgttt---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338594 9 + 187378091 tatttgttt---- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363568 9 + 91754291 tatttgttt---- i chlSab2.chr15 C 0 I 67 s calJac3.chr17 73844882 9 + 74750902 tatttgttt---- i calJac3.chr17 C 0 C 0 e mm10.chr16 32792444 12 + 98207768 I e canFam3.chr33 2325534 100 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=24561.000000 s hg38.chr3_KI270937v1_alt 67479 39 + 165607 ta-tcttaccttttttttttgagacggagtttcactc-cgt---------------------------- s ponAbe2.chr3 2385691 37 - 202140232 ta-tcttac--tttttttttgagacggagtttcactc-cat---------------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856353 38 - 123690457 ta-tcttac-ttttttttttgagatggagtttcactc-tgt---------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 103856 35 - 111706 ----gtttg--tttgtttttgagatggagtttcactctcat---------------------------- i rheMac3.chrUn_JH291127 C 0 I 28 s macFas5.chr2 192417342 35 - 192460366 ----gtttg--tttgtttttgagatggagtttcactctcat---------------------------- i macFas5.chr2 C 0 I 28 s papAnu2.chr2 187338603 35 + 187378091 ----gtttg--tttatttttgagatggagtttcactctcgt---------------------------- i papAnu2.chr2 C 0 I 28 s calJac3.chr17 73844891 67 + 74750902 tattattat--gattattttgatatggaatttcactcttgtcacccaggccagagtgcagtggtgtgat i calJac3.chr17 C 0 C 0 e mm10.chr16 32792444 12 + 98207768 I e canFam3.chr33 2325534 100 - 31377067 I e chlSab2.chr15 91363577 67 + 91754291 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=107658.000000 s hg38.chr3_KI270937v1_alt 67518 47 + 165607 ctcagctcactgtaacctccacctcccgggttcaagtgattctcctg s ponAbe2.chr3 2385728 47 - 202140232 ctcagctcactgcaacctccgcctcccgggttcaagtgattctcctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2856391 46 - 123690457 ctcagctcactgcaacctccacctcccgggttc-agtgattctcctg i nomLeu3.chr11 C 0 I 87802 s rheMac3.chrUn_JH291127 103919 47 - 111706 ctcggctcacttcaacctccacctcccgggctcaagcgattctcctg i rheMac3.chrUn_JH291127 I 28 C 0 s macFas5.chr2 192417405 47 - 192460366 ctcggctcacttcaacctccacctcccgggttcaagcgattctcctg i macFas5.chr2 I 28 C 0 s papAnu2.chr2 187338666 47 + 187378091 ctcggctcacttcaacctccacctcctgggttcaagtgattctcctg i papAnu2.chr2 I 28 C 0 s chlSab2.chr15 91363644 47 + 91754291 ctcggctcacttcaacctccacctcccgggttcaagtgattctcctg i chlSab2.chr15 I 67 C 0 s calJac3.chr17 73844958 47 + 74750902 ctcagctcactgtaacctccacctcctgggttcaagcagttcgcctg i calJac3.chr17 C 0 C 0 e mm10.chr16 32792444 12 + 98207768 I e canFam3.chr33 2325534 100 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=292014.000000 s hg38.chr3_KI270937v1_alt 67565 189 + 165607 cctcagtctcccaagtagctgggattacaggcgcccaccactgcgcccagctaattttcatatttttagtagagatggggtttcaccatgttggtcagcctggtctcgaactcctgacctcaggtgatccgcccgcctctgcctcccaaagtgctgggattacaggcataagccaccgctccagg------ccTG s ponAbe2.chr3 2385775 189 - 202140232 cctcagcctctcaagtagctgggattacaggcgcccgccaccaagcccagctaattttcatatttttagtagagatggggtttcatcatattggtcaggctggtctcaaacttctaacctcaggtgatccgcccacctctgcctcccaaagtgctgggattacaggcataagccaccgcactcgg------ccTG i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 103966 195 - 111706 cctcagcttgtggcctagctgttattacaggcgtgcgccaccacgcccggttccttttcaaatttttagtagagacggggtttcactatgttggacaggctggtcttaaactcctaacctcaggtgatttcccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccgctcccggccTGTACCTG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417452 195 - 192460366 cctcagcctcccgagtagctggtattacaggcgtgcgccaccacgcccggttcattttcaaatttttagtagagacggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccgctcccggccTGTACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338713 195 + 187378091 cctcagcctcccgagtagctggtattacaggcgtgcgccaccacgcccggttcattttcaaatttttagtagagacggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctcggcctcccaaagtgctggcgttacaggcgtgagccaccgctcccggcctgtacctg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363691 189 + 91754291 cctcagcctcctgagtagctggtattacaggcgtgcaccaccacgccccgttcattttcaaatttttagtagagacggggtttcactatgttggccaggctggtcttaaactcctaacctcaggtgatttaccctcctccacctcccaaagtgctggcgttacaggcgtgagccaccgctcccgg------ccTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845005 188 + 74750902 cctcagcctcctgagtagctggaattacaggcatgtgctactatacctggctaatttttgtatttttaatatagacggggtttcaccatgttgaccaggctggtctcgaactcctaaccttaggtggt-cacccccctcggcctcccaaagtgctgagattacaggcatgagccgccgcacccag------ccCG i calJac3.chr17 C 0 C 0 e mm10.chr16 32792444 12 + 98207768 I e canFam3.chr33 2325534 100 - 31377067 I e nomLeu3.chr11 2856437 87802 - 123690457 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=70472.000000 s hg38.chr3_KI270937v1_alt 67754 34 + 165607 TATTAATTTATTTTAAGTCACTATCTATGGCATA s ponAbe2.chr3 2385964 34 - 202140232 TATTAATTTATTTTAAGTCACTATCTATGGCATA i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 104161 34 - 111706 TATTCATTTATTTTAGGTCACTATCTATGGCATA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417647 34 - 192460366 TATTCATTTATTTTAGGTCACTATCTATGGCATA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338908 34 + 187378091 tattcatttattttaggtCACTATCTATGGCATA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363880 34 + 91754291 TATTCATTTATTTTAAGTTACTATCTATGGCATA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845193 34 + 74750902 TATGTATTTATTTTAAGTCACTATCTATGGCATA i calJac3.chr17 C 0 C 0 s mm10.chr16 32792456 34 + 98207768 TGTTGGTTTGTCTAAAATCACTCTTTATGGTGTA i mm10.chr16 I 12 C 0 e canFam3.chr33 2325534 100 - 31377067 I e nomLeu3.chr11 2856437 87802 - 123690457 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=589063.000000 s hg38.chr3_KI270937v1_alt 67788 246 + 165607 AATCCCAGGAAATGCATCCAGCAGGCCCCACTTTCATGGGGTCCCAGCCTG---TCAGAGAGCAGCAGCTTGGGCCTGATGCCTGCCTGCTGCTCCTCTGTGTGGCTATGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTCAACAGTGCACTtcacagaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aaatacaggtggagaaactga------------ggcccagaga----gggacagggacttgccc s ponAbe2.chr3 2385998 246 - 202140232 AATCCCAGGAAATGCATCCAGCAGGCCCCAATTTCATGGGGTCCCAGCCCG---TCAGAGAGCAGCAGCTTGGGCCTGATGCCCGCCTGCTGCCCCTCTGTGTGGCTATGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTCAACAGTGCACTtcacagaaggtcagagttggacaggacttcagtgcccatcccaaccttctcc---------------------------------------------------------------------------------aactatgggtgggaaaactga------------ggcccagaga----cggatggggacttgccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944239 246 - 123690457 AATCCCAGGAAATGCATCCAGCAGGCCCCACTTTCATGGGGTCCGAGCCCA---TCAGAGAGCAGCAGCTTGGGCCTGATGCCTGCCTGCTGCTCCTCTGTGTGGCTATGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTCAACAGTGCACTtcatggaaggtcagagctggacaggacttcagtgcccattccaaccctctcc---------------------------------------------------------------------------------aactatgggtggggaaactga------------ggcccagaga----gggacagggacttgccc i nomLeu3.chr11 I 87802 C 0 s rheMac3.chrUn_JH291127 104195 246 - 111706 AATCCCAGGAAATGCATCCAGCGTGTCCCACTTTCATGGGGTCCCAGCCTG---TCAGAGAACAGCAGCTTGGGCCTGATGCCTGCATGCTGCTCCTCTGTGTGGCTACGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTTAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggcccggaga----gggagagggacttgccc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417681 246 - 192460366 AATCCCAGGGAATGCATCCAGCGTGTCCCACTTTCATGGGGTCCCAGCCTG---TCAGAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTCTGTGCGGCTACGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTTAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctcc---------------------------------------------------------------------------------aactacaggtggggaaactga------------ggcccggaga----gggagagggacttgccc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187338942 246 + 187378091 AATCCCAGGAAACGCATCCAGCGTGCCCCACTTTCACGGGGTCCCAGCCCG---TCAGAGAACAGCAGCTTGGGCCTGATGCCTGCACGCTGCTCCTCTGTGTGGCTATGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTCAACAGTGAACTTCATAGAAGGTCAGAGCTGGACAGGACTTCGGTGCCCATCCCAACCCTCTCC---------------------------------------------------------------------------------AActgcaggtggggaaactga------------ggcccagaga----gggagagggacttgccc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91363914 327 + 91754291 AATCCCAGGAAATGCATCCAGCAGGCCCCACTTTCATGGGGTCCCAGCCCG---TCAGAGGGCAGCAGCTTGGGCCTGATGCCTGCATGCTGCTCCTCTGTGCGGCTATGGCTGGAATAGAAGCTTCCAG------------------------------------------------------AGCTGCTCAACAGTGAACTtcatagaaggtcagagctggacaggacttcggtgcccatcccaaccctctccaactacaggtggggaaactgaggctcggagagggagagggacttgcccaaggtcacttgtgttgttagagacagagcCAAAAACtacaggtggggaaactga------------ggcccggaga----gggagagggacttgccc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845227 246 + 74750902 AATCCTAGGAAATGCATCCAGAGGGCCCCACTTTCATGGGGTCCCAGCCTG---TCAGAGAGTAGCAGCTTGGGCCTGATGCCTGCGTGCTGCTCCTCTGTGGCGCAACGGCTGGAATAGAAGTTTCCAG------------------------------------------------------AGCTGCTCAACAGTGAACTtcacagaagttcagagctggaaaggacttcagtgcccatcccaagcctctcc---------------------------------------------------------------------------------aactacaggtggagaaactga------------ggcccagaga----gggagagggacttggtc i calJac3.chr17 C 0 C 0 s mm10.chr16 32792490 298 + 98207768 AAACACAGTAAATATGGCCACCAAGCCCCACTTGCGTG----CCCTGCACATGCTTGCAGGGCAGCGATTTGGACGC-ATTTGCACATTCTTTCCTTCTGTGTGGGCATTGCTGG-CTAGAGGCTTCCAAGGCGTGAGGGTCAAGTCTTTTGAATAGCATTACAGATCTCATCTGAAGCACAGTAGCCGCCCAATAGTTAACTTCACAGAAG-TTAGACCTGGAAAAGA---TGGCGCTCATCC--------------------------------------------------------------------------------------------ACCACAAAGCGAAGAAACTAGCTGCTTTTTACCAGCCAGGAGATCAGAGGAGAGGGGCAGGTCC i mm10.chr16 C 0 C 0 e canFam3.chr33 2325534 100 - 31377067 I e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=106392.000000 s hg38.chr3_KI270937v1_alt 68034 40 + 165607 aaggtcactcgggttgttacaggc-agagccgagaccgcaa s ponAbe2.chr3 2386244 40 - 202140232 aaggtcactcaggttgttagaggc-agagccgagaccacaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944485 40 - 123690457 aaggtcacttgggttgttagaggc-agagccgagaccgcaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 104441 40 - 111706 aaggtcactcgggttgttagaggc-agagctgagactgaaa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417927 40 - 192460366 aaggtcactcgggttgttagaggc-agagctgagactgaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339188 40 + 187378091 aaggtcactcggGTTGTTAGAGGC-AGAGCTGAGACCGAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364241 40 + 91754291 aaggtcactcgggttgttagaggc-agagctgagactgaaa i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845473 40 + 74750902 agggccgctcgggctgttaagggc-agagctgagatggcaa i calJac3.chr17 C 0 C 0 s mm10.chr16 32792788 36 + 98207768 AAGGTCTCTCAGGTT----AAAGC-ACAGCCAAGATCTCAA i mm10.chr16 C 0 I 113 s canFam3.chr33 2325634 41 - 31377067 AAGGTCACTTAACAACTTAAGGGCAAAAACCAGGATCTCAA i canFam3.chr33 I 100 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=225511.000000 s hg38.chr3_KI270937v1_alt 68074 89 + 165607 accatttctccggacttccatccccacc-c------------------------------------------------------ctttccatacacaaccctccatct-------gCCTTTTCCTGATTTCGCCAAGAACCACTAGAAGAT s ponAbe2.chr3 2386284 89 - 202140232 accatttctccagacttccatccccaca-t------------------------------------------------------ctttccatacacaaccctccatct-------gccTTTTCCTGATTTCGCCAAGAACCACTAGAAGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944525 87 - 123690457 accatttctccggacttccatctccac---------------------------------------------------------ctttccatacacaaccCTCCATCT-------GCCTTTTCCTGATTTCGTCAAGAACCACTAGAAGAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 104481 89 - 111706 accatttctccagacttccatctccacc-t------------------------------------------------------ctttccatacacaaccCTCCATCT-------GCCTTTTCCTGATTTCGCCAAGAACCACTAGAAGAT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192417967 89 - 192460366 accgtttctccagacttccatctccacc-t------------------------------------------------------ctttccatacacaaccctccatct-------gccTTTTCCTGATTTCGCCAAGAACCACTAGAAGAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339228 89 + 187378091 ACCATTTCTCCAGACTTCCATCTCCACC-T------------------------------------------------------CTTTCCATACACAACCCTCCATCT-------GCCTTTTCCTGATTTCGCCAAGAACCACTAGAAGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364281 89 + 91754291 accatttttccagacttccatctccacc-t------------------------------------------------------ctttccatacacaaccctccatct-------gCCTTTTCCCGATTTCACCAAGAACCACTAGAAGAT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845513 87 + 74750902 accatgtctccagacttccatctccacg--------------------------------------------------------ctctccacacgctg-cctccatct-------gccTTTTCCTGATTTAGCCAAGAACCACTGGAAGAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32792937 148 + 98207768 atcattacatcacacatacatcactaca-tcacacacacatcatgatatcacatatatatcatgacatcacacatacatcacaacgtcacctacacatcacTACATCTCATATACATCTTAGCTGCTTTTTACC--GACCCACCAGGAGGT i mm10.chr16 I 113 C 0 s canFam3.chr33 2325675 89 - 31377067 -ACATTTCTCCAGACTTCCAACCCCACAGT------------------------------------------------------GTTTCCATACACCTCCCTAACTGT-------CCTTGTTTCTGATTTTGGGAAGCATCACTAGAAGAT i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=260456.000000 s hg38.chr3_KI270937v1_alt 68163 120 + 165607 CACGAAGAGGCA-ACATCAGGAGC-AGGCTCTGAGTAGG-CTCCAGATCCTTCCCTCCTCTCCACTCCTCAAGTGCGGAGACGTCCTGGAAACTCCGCATCCCAAATCCCCGAAGAT-CACCAG s ponAbe2.chr3 2386373 120 - 202140232 TACAAAGAGGTA-ACATCAGGAGC-AGGCTCTGAATAGG-CTCCAGATCCTTCCTTCCTCTCCACTCCTCAAGTGAGGAGACCTCCTGGAAACTCCGCATCCCAAATCCCCGAAGAT-CACCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944612 120 - 123690457 CACGAAGAGGCG-ACATCAGGAGC-AGGCTCTGAATAGG-CTCCAGATCCTTCCTTCCTCTCCACTCCTCAAGTGCGGAGACGTCCTGGAAACTCCGCATCCCAAATCCCCGAAGAT-CACCGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 104570 119 - 111706 CACGAAGCGGCA-ACATCAGGGGC-AGGCTCTGAATAGG-CTCCAGATCCTTCCTTCCCCTCCACTCCTCAAGCGCGGAGACGTCCTGGAAACTCCGCATCCCAAAT-CCCAAAGAT-CACCAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418056 119 - 192460366 CACGAAGCGGCA-ACATCAGGGGC-AGGCTCTGAATAGG-CTCCAGATCCTTCCTTCCCCTCCACTCCTCAAGCGCGGAGACGTCCTGGAAACTCCGCATCCCAAAT-CCCAAAGAT-CACCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339317 120 + 187378091 CACGAAGCGGCA-ACATCAGGGGC-AGGCTCCAAATAGG-CTCCagatccttccttcctctccactcCTCAAGCGCGGAGACGCCCTGGAAACTCCGCATCCCAAATCCCCAAAGAT-CACCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364370 120 + 91754291 CACGAAGCGGCA-ACATCAGGGGC-AGGCTCCAAATAGG-CTCCAGATCCTTCCTTCCTCTCCACTCCTCAAGCGCGGAGACGTCCTGGAAACTCCGCATCCCAAATCCCCAAAGAT-CACCAG i chlSab2.chr15 C 0 C 0 s mm10.chr16 32793085 94 + 98207768 CATGAAATGCCA------AGGAGA-GGGTGCAATATTGGCCTTTAGCTCCTTCTTTCAACTCAACTCCTTAAG------------------GCT----ACTCCAAATCTCCAAAAAT-CTCTCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2325764 123 - 31377067 CATGAAAAGGGGGGCATCAGAGACGGGGCTCAGAATAGG-CCCCAGATCCTTCCTCCCTCCCCACCCCCTGAGCACGTAGACATCCTGGCAAGTCCAAACCCTGAATCCCCAAGCTCACACCCG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73845600 0 + 74750902 C e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=455662.000000 s hg38.chr3_KI270937v1_alt 68283 158 + 165607 CAGGAG--CCACTTACCTGCACTCATGTCTGTGGTCGGCCTCGTCCGGGCAGTCGTGGGCGTGGCTGTTGGGGGCTTCA---------------------TCGTGGTCTTCGCTGAGGTTGTGATCTTGGCTAAGGTGCTGTTCGTCCCTCGGCTGCTGTTGGTTGTAGTTGGAGGGACAG s ponAbe2.chr3 2386493 158 - 202140232 AGGGAG--CCACTTACCTGCACTCACGTCTGTGGTCAGCCTCGTCCGAGCAGTGGTGGGCGTGGCTGTTGGGGGTTTCA---------------------TGGGGGTCTTTGCTGAGGTTGTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGGCTGCTGTTGGTTGTAGTCGGAGGGACAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944732 158 - 123690457 CAAGAA--CCACTTACCTGCACTCCTGTCTGCGGTCGGCCTCGTCCGAGCAGTGGTGGGCATGGCTGTTGGGGGCTTCA---------------------TCAGGGTTTTCGCTGAGGTCGTGGTCTTGGCTAAGGAGCTGTTCGTCCCTTGGCTGCTGCTGGTTGTAGTCGGAGGGACAG i nomLeu3.chr11 C 0 I 39 s rheMac3.chrUn_JH291127 104689 158 - 111706 CAGGAG--CCACTTACCTGCACTCACGTCTGTGGTCGGCCTCGTCCGAGCAGTGGTGGGCGTGGCTGTTGGGGGCTTCA---------------------TCGGGGTCTTCGCTGAGGCTGTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGGCTGCTGTTGGCTGTAGTCGGAGGGACAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418175 158 - 192460366 CAGGAG--CCACTTACCTGCACTCACGCCTGTGGTCGGCCTCGTCCGAGCAGTGGTGGGCGTGGCTGTTGGGGGCTTCA---------------------TCGGGGTCTTCGCTGAGGCTGTGGTCTTGGCTAAGGTGCTGTTCATCCCTCGGCTGCTGTTGGCTGTAGTCGGAGGGACAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339437 158 + 187378091 CAGGAG--CCACTTACCCGCACTCACGTCTGTGGTCGGCCTCCTCCAAGCAGTGGTGGGCGTGGCTGTTGGGGGCTTCA---------------------TCGGGGTCTTCGCTGAGGCTGTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGGCTGCTGTTGGCTGTAGTCGGAGGGACAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364490 158 + 91754291 CAGGAG--CCACTTACCTGCACTCACGTCTGTGGTCGGCCTCGTCCGAGCAGCGGTGGGCGTGGCTGTTGGGGGCTTCA---------------------TTGGGGTCTTCGCTGAGGCTGTGGTCTTGGCTAAGGTGCTGTTCGTCCCTCGGCTGCTGTTGGCTGTAGTCGGAGGGACAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845600 140 + 74750902 CAGGGG--CCACCTACCTGCGCTGACGTTTGTGGTCTGCCCCGTCCGGGCAGTGGGGGACATGGCTGTCAGGGGCTCCA---------------------TCGGGG------------------TCTTGGCTGAGGTGCTGCTGGTTCCTGGGCTGCTGCTGGCTGTAGTCGGATGGATAG i calJac3.chr17 C 0 C 0 s mm10.chr16 32793179 157 + 98207768 TGGGAGTTTTGCTTACCTGGATCATGTTTTGTGGTTTTCCTTATCCAAGCAGT---GGATGCAGATGTTGTAGGATGCG---------------------TCGGGGGCTTTGGTGAGGCTGTGGTCTTGGTTAAGGTGATGTTTGGGTTTTTGCTGGTGCTAGCTGTAGTTGAATAGATAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2325887 179 - 31377067 AGGGAG--CCACTTACCCGCAGTGGCTTCTGTGGTCCACCTTGTCTGAACCACAGTGGGCATAGCTGTTGGGGTCTTCCCTCCAGCCACGCTGGCTGTCTTCAAGGTCTTTGCTAAGGCTGTGGTCCTAAATAAGGTGATGTTTGCCTCTTGGCTGCTGTTGGCCCTGGTCAGCTGGACAG i canFam3.chr33 C 0 C 0 e panTro4.chr3_GL389630_random 43158 2346 - 103936 I a score=270847.000000 s hg38.chr3_KI270937v1_alt 68441 81 + 165607 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTTGCGATGTCCGTGG--TCAGTGTCTCTGAAGGGGTGAAGTTCT s panTro4.chr3_GL389630_random 45504 84 - 103936 AAGGAAGAGGGTCCCCTGCTGTTGGGGAAGGGC-CCCTTTGGTTGGGATTTTCGGGGGTCCAGT-TCTTTGAAGGGGTGAAGTTCT i panTro4.chr3_GL389630_random I 2346 C 0 s ponAbe2.chr3 2386651 81 - 202140232 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTG-GGTTGTGATGTCCGTGG--TCGGTGTCTCTGAAGGGGTGAAGATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2944929 81 - 123690457 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTCGTGATGCCCGTGG--TGGGTGTCTCTGAAGGGGTGAAGTTCT i nomLeu3.chr11 I 39 C 0 s rheMac3.chrUn_JH291127 104847 81 - 111706 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTTGTGACGTCGGCAG--TCGGTGTCTCTGAAGGGGTGAAGTTCT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418333 81 - 192460366 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTTGTGACGTCGGCAG--TCGGTGTCTCTGAAGGGGTGAAGTTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339595 81 + 187378091 AAGGAAGACGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTTGTGACGTCTGCAG--TCGGTGTCTCTGAAGGGGTGAAGTTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364648 81 + 91754291 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAGGGC-CCCTT-GGTTGTGACGTCTGCAG--TCGGTGTCTCTGAAGGGGTGAAGTTCT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73845740 79 + 74750902 AAGGAAGAGGGTCCC-TGCTGGTGGGGAAAGGCGCCCTT-GGCTGTGAAGTCCATGG--TGG---TCTCTGACGGGGTGAAGTTCT i calJac3.chr17 C 0 I 2871 s mm10.chr16 32793336 81 + 98207768 AAAAAGGAGGGTGGC-TCTCTGTGAGGAAGGAG-CTGTT-GGTTGTATTGCCTGTGG--TTAAAGTCTCTGAGGTAGCAGAGCTCT i mm10.chr16 C 0 I 3 s canFam3.chr33 2326066 81 - 31377067 AAGGAGCGGGGCTCC-TGGTGATGGGGACAGAC-TCATT-GGTTGTGCCATCCGCGG--TAGAAGGCTGTGAGGGGGTGGTGCTCT i canFam3.chr33 C 0 C 0 a score=752713.000000 s hg38.chr3_KI270937v1_alt 68522 247 + 165607 ---TGAGGGCGGCTTCCGAGGG------GCTGTAGGAGGAAGCAGAGCTCCCAGCAAAGGAAGTTGTTTTGCCCACTGCTGACCCAGCCTCTATGGAGACCGGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCAACAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCC------CTGTGGCCAGAGCTCCACTGAGGGTCGTGGCCCCGGGTGCTGTCACTTCTCTTTCTATGGTGCTGTTGGTGGGGAGTGGGGT s panTro4.chr3_GL389630_random 45588 247 - 103936 ---TGAGGGCGGCTTCCGAGGG------GCTGTAGGAGGAAGCGGAGCTCCCAGCAAAGGAAGTTGTTTTGCCCACTGCTGACCCAGCCTCTATGGAGACCGGAGCTGCTCCTGAGACTTTCACGTAACTTGGTGTCTCAACAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCC------CTGTGGCCAGAGCTCCACTGAGGGTCATGGCCCTGGGTGCTGTCACTTCTCTTTCTATGGTGCTGTTGGTGGGGAGTGGGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2386732 253 - 202140232 ---TGAGGGTGGCTTCCGAGGG------GCTGTAGGAGGAAGCAGAGCTCCCAGCAAAGGAAGTAGTTTTGCCCACTGCTGACCCAGCCTCTATGGAGACCAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCAACAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCACTAACTGTGGCCAGAGCTCCACTGAGGGTCGTGGCCCTGGGTGCTGTCACTTTGCTTCCTGTGGTGCTGTTGGTGGGGAGTGGGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945010 253 - 123690457 ---CGAGGGCGGCTTCCGAGGG------GCTGTAGAAGGAAGCAGAGCTCCCAGCAAAGGAAGTGCTTTTGTCCACTGCTGACCCAGCTTCTATGGAGACCGGGGCTGCTCCTGAGACTCTGACGTAACTTGGTGTCTCAACAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTAACTGTGGCCAGAGCTCCACTGAGGGTTGTGGCCCTGGGTGCTGTCACTTCTCTTTCCGTGGCACTGTTGGTGGGGAGTGGGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 104928 253 - 111706 ---TGATGGTGGCTTTTGAGGG------GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCACAGAGAGGGCTGAGGTTTCTTCCAGGGGACTCCCGCTAACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCTGGGTGCTGTCACTTCTCTTTCTGTGGCGCTGTTGGTGGGGAGTGGGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418414 253 - 192460366 ---TGATGGTGGCTTTTGAGGG------GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGAGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCACAGAGAGGGCTGAGGTTTCTTCCAGGGGACTCCCGCTAACTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCTGGGTGCTGTCACTTCTCTTTCTGTGGCGCTGTTGGTGGGGAGTGGGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339676 253 + 187378091 ---TGATAATGGCTTCTGAGGG------GCTGTAGGAGGAAGCACAGCCCCCAGCAAAGGAAGCTGTTTTGCCCACTGTTGACCCGGCCTCTGTGGGGACGAGAGCTGCTCCTGAGACTTTGACGTAACTTGGTGTCTCCGCAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTACCTGTGGCCAGAGTTCCACTGAGGGTCGTGGCCCTGGGTGCTGTCACTTCTCTTTCTGTGGCGCTGTTGGTGGGGAGTGGGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364729 253 + 91754291 ---TGATGGTGGTTTTTGAGGG------GCTGCAGGAGGAAGCAGAGCCCCCAGCAAAGGAAGCTGTTTTGCACACTGCTGACCCGGCCTCTGTGGGGACGAGAGCTGCTCCTGAGACTTTGACGCAACTTGGTGTCTCAACAGAGAGGGCTGAGGTTTCTTCCAGGGGATTCCCGCTACCTGTGGACAGAGTTCCACTGAGGGTCGTGGCCCTGGGTGCTGTCACTTCTCTTTCTGTGGCGCTGTTGGTGGGGAGTGGGGT i chlSab2.chr15 C 0 C 0 s mm10.chr16 32793420 256 + 98207768 ---TGGTGACCACCACTGAGAGACTGCTGCTGTCGAGAGCCGTGAAACTC---ACGAAGGAGGCTGCTTCTCCCATTGTTGATCCAGCAACCATGGGGACTGTGATGGTGCCCAAGACCTCAGTGTGGCTTTGTGTCTCAATAGAGAGTGTTGAAGTGTTTTCCAGGGGGTTCCTTCTAACTGTCACCGAAGTTCCAACAGAGGTAAGAGTCTGGGCCACTGCTGTTTCGCTTTCTGTGATTGCACTAGTGGAGACTGTCCC i mm10.chr16 I 3 C 0 s canFam3.chr33 2326147 256 - 31377067 TGCTAGTGGCGATGTGGCTGTA------GCTGTGGGCCATAGTTGAGAGCCCAGCAGGTGAAGTCGCTTTCCCCACTGTTAACCCAGCCTCTGTGGAGACTGTCACTGCTCCCAAGACCTTGGTGTGGCTTGTCGTCTCAATAGAGAGGACTGAAGCTTCTTCCAAGGGGTTCACGCTGACTGAGACCAAAGTTGTGCTGGGGGTGGTGGTCGTAGCTGCTGTTGCTTCTCCTTCTGTAGGGCTATTGGCAGTTAGTGGGGT i canFam3.chr33 C 0 C 0 e calJac3.chr17 73845819 2871 + 74750902 I a score=903758.000000 s hg38.chr3_KI270937v1_alt 68769 239 + 165607 CCCAATCGTGGCATCAGGTGCAGCTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGACCTCAGTGATGTGTGGTTTTGCTTCAGTGGAGTCAGGCAGAGCTGGTGGATCGGAGGTGGACGAGGCCTTCACCCCTTCCGTGGGGATGGGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGCAATTAATAACCTCGATGT s panTro4.chr3_GL389630_random 45835 239 - 103936 CCCAACCGTGGCATCAGGTGCGGCTGACTCTGTGGTGCCAGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCAGTGATGTGTGGTTTTGCATCAGTGGAGTCAGGCAGAGCTGGTGGATCGGAGGTGGACGAGGCCTTCACCCCTTCCGTGGGGATGAGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCATTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCAATGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2386985 239 - 202140232 CCCAACTGTGGCACCAGGTGCGGCTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCAGTGATGTGTGGTTTTGCGTCAGTGGAGTCAGGCAGAGCTGGTGGATCAGAGGTGAACGAGGCCTTCACCCCTTCCGTGGGGACGTGATCTCTGTCTGAGGCCCCAGGGATGCTGGAAGTCAGTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCGATGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945263 239 - 123690457 CCCAACCGTGGCATCAGGTGCAGCTGACTCTGCGGTGCCGGCTGTGGACAGGGTCTCGGGAGAGGCTGTGGCCTCCGTGACGTGTGGTTTTGCGTCAGTGGAGTCAGGCAGAGCTGGTGGATGGGAGGTGGGCGAGGCCTTCACCCCTTCCGTGGGGATGTGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCGTTGTTTCTATTTCTGTGATGCTGCAATTGATAACCTCGATGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105181 239 - 111706 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCGGTGCTGTGTGGTTTTGCATCAGTGGAGTCAGGCAGAGCTGGTGGATTGGAGGTGGGCGAGGCCTTCATCCCTTCCGTGGGGATGTGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418667 239 - 192460366 CCCAACCGTGGCATCAGGTGCGGTTAACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCAGTGCTGTGTGGTTTTGCATCAGTGGAGTCAGGCAGAGCTGGTGGATTGGAGGTGGGCGAGGCCTTCATCCCTTCCGTGGGGATGTGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCGTTGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCAATGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187339929 239 + 187378091 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCGGGGCTGTGTGGTTTTGCATCAGTGGAGTCAGGCAGAGCTGGTGGATTGGAGGTGGGCGAGGCCTTCATCCCTTCCGTGGGGATGTGATCTGCGTCTGAGGCCCCAGGGATGCTGGAAGtccttgtttctgtttctgtgacgCTGCAATGGATAACCTCGATGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91364982 239 + 91754291 CCCAACCGTGGCATCAGGTGCGGTTGACTCTGTGGTGCCGGCTGTGGACAGGGTCTCGGCAGAGGCTGTGGCCTCGGTGCTGTGTGGTTTTGCCTCAGTGGAGTCAGGCAGAGCTGGTGGATTGGAGGTGGGCGAGGCCTTCATCCCTTCCGTGGGGATGTGATCTGTGTCTGAGGCCCCAGGGATGCTGGAAGTCGTCGTTTCTGTTTCTGTGATGCTGCAATTGATAACCTCGATGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848690 239 + 74750902 CTTAACTGTGGCATCAGGTGTGGCTGACTCTGTGGCGCTGGCTGTTGACGGGGTCTCAGCGGAGGCCGTGGCCTCCGTGACGTGTGGTTCTGTGGCAGTGGAGTCGGGCAGAGCTGGTGGATGCAAGGTGGGCGAGTCCTTCACTGCTGCTGTGGAGATGTGGTCTGTGTCTCGGGCCCCAGCGATGATGGAAGTGGCTGTTTCTATTTCTGGGATGCTGCAGTTGATAACCTCCATGT i calJac3.chr17 I 2871 C 0 s mm10.chr16 32793676 224 + 98207768 CTCAAGGGTGGTGGCAAGGG---------CCGGGGTGCCAGCAGTTGACAGGATCCCAGATAAGCTTGTGGTCTCGGGGAAAATTGGTTTTGCCTCAGTGGGTGGAGGCAAAGTTAATATCTCAGAAGTGAACAAAGCTGCCGTCGCTTCTGTAGGGCTGAGGCTCGCGCCTGGGGCCCCAGAGATGGTG---ATGGTTGTTTCTATTTCTGTGA---TGCAGTTGCTGAGTTTAATAT i mm10.chr16 C 0 I 10 s canFam3.chr33 2326403 233 - 31377067 CTCAACTGTGGTATCAGGTGTGGCTGCCTCTGTGGCACTGGCTGCTGACAAGGTCTCCGCGGATGGTGTGGTCTCGGTGATGTGTGATTCTGCTTCAGTGGAATTGAGCAAAGCTGACACCACAGGGGGAGATAGGACCTCTCCCCCT---GTGGGGTTGAGATCCATGTCCAAGGTCCCAAGGGTGGTGGCAGT---TGTTTCTATTTCTAGAATGCTGCAGTTGGCAACCTCAATGT i canFam3.chr33 C 0 C 0 a score=10969.000000 s hg38.chr3_KI270937v1_alt 69008 4 + 165607 TTGT s panTro4.chr3_GL389630_random 46074 4 - 103936 GGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387224 4 - 202140232 GGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945502 4 - 123690457 GGGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105420 4 - 111706 GGGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418906 4 - 192460366 GGGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340168 4 + 187378091 GGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365221 4 + 91754291 GGGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848929 4 + 74750902 GGGT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2326636 4 - 31377067 CAGT i canFam3.chr33 C 0 C 0 e mm10.chr16 32793900 10 + 98207768 I a score=12677.000000 s hg38.chr3_KI270937v1_alt 69012 3 + 165607 GAC s panTro4.chr3_GL389630_random 46078 3 - 103936 GAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387228 3 - 202140232 GAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945506 3 - 123690457 GAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105424 3 - 111706 GAC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418910 3 - 192460366 GAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340172 3 + 187378091 GAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365225 3 + 91754291 GAC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848933 3 + 74750902 GAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32793910 3 + 98207768 GAA i mm10.chr16 I 10 C 0 s canFam3.chr33 2326640 3 - 31377067 GAT i canFam3.chr33 C 0 I 7 a score=1722.000000 s hg38.chr3_KI270937v1_alt 69015 1 + 165607 A s panTro4.chr3_GL389630_random 46081 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387231 1 - 202140232 G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945509 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105427 1 - 111706 G i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418913 1 - 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340175 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365228 1 + 91754291 G i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848936 1 + 74750902 A i calJac3.chr17 C 0 C 0 s mm10.chr16 32793913 1 + 98207768 G i mm10.chr16 C 0 C 0 e canFam3.chr33 2326643 7 - 31377067 I a score=173582.000000 s hg38.chr3_KI270937v1_alt 69016 51 + 165607 GTCACCAGGGCTTCAGCGAGGAGAGTGACGTCAGATCCCGGGGACCATGAG s panTro4.chr3_GL389630_random 46082 51 - 103936 GTCACCAGGGCTTCAGCGAGGAGAGTGACATCAGATCCCGGGGACCATGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387232 51 - 202140232 GTCACCAGGGCTTCAGTGAGGAGAGTGACGTCAGATCCCGGGGACCATGAG i ponAbe2.chr3 C 0 I 399 s nomLeu3.chr11 2945510 51 - 123690457 GTCACCAGGGCTTCAGCGAGCAGAGTGACGTCAGATCCCGGGGACCATGAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105428 51 - 111706 GTCACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGGGGACCATGAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418914 51 - 192460366 GTCACCAGGGCTTCAGTGAGGAGAGCGACGTCAGATCCCGGGGACCATGAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340176 51 + 187378091 GTCACCAGGGCTCCAGCGAGGAGAGCGACGTCAGATCCCGGGGACCATGAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365229 51 + 91754291 GTCACCATGGCTTCAGTGAGGAGAGTGACGTCAGATCCCGGGGACCATGAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848937 51 + 74750902 GCCACCAGCGCTTCGGTGAGGACAGTGACGTCAGATGCGGGGGTCCATGAG i calJac3.chr17 C 0 C 0 s mm10.chr16 32793914 51 + 98207768 GCAACCAACCCCTTGGCTGGAGTTGCACTGTCGGGTCCCAGGACTCGTGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326650 51 - 31377067 GCAAACAAACCCTTAGCCGGAGTGCTCTTGTCAGGTGCGAGGGCCCGTGGG i canFam3.chr33 I 7 C 0 a score=127459.000000 s hg38.chr3_KI270937v1_alt 69067 36 + 165607 GGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCG s panTro4.chr3_GL389630_random 46133 36 - 103936 GGGGTGATGACTGGATGGGGGCCGTCAGAAGAGGCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387682 36 - 202140232 GGGGTGATGACTGGATGGGGGCTATCGGAAGAGGCA i ponAbe2.chr3 I 399 C 0 s nomLeu3.chr11 2945561 36 - 123690457 GGGGTGATGACCGGATGGGGGCCGTCGGAAGAGGCG i nomLeu3.chr11 C 0 T 50 s rheMac3.chrUn_JH291127 105479 36 - 111706 GGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192418965 36 - 192460366 GGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340227 36 + 187378091 GGGGTGACGGCTGGATGGGGGCCGTCGGAAGAGGTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365280 36 + 91754291 GGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848988 36 + 74750902 GTGGTGATGGCTGGCCGGGAGCCGTGGGAAGAAGCG i calJac3.chr17 C 0 T 48 s mm10.chr16 32793965 36 + 98207768 CTGCTGAGGACCCCAGCTGAACTGTCAGAGGAAGAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2326701 36 - 31377067 GCGGTGATGGCCAGAACTGAGCTGTCGGAGAAGGCG i canFam3.chr33 C 0 C 0 a score=14041.000000 s hg38.chr3_KI270937v1_alt 69103 7 + 165607 CTGCTCT s panTro4.chr3_GL389630_random 46169 7 - 103936 CCGCTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387718 7 - 202140232 CTGCTCT i ponAbe2.chr3 C 0 C 0 s rheMac3.chrUn_JH291127 105515 7 - 111706 CTGCTGT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419001 7 - 192460366 CTGCTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340263 7 + 187378091 CTGCTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365316 7 + 91754291 CTGCTGT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2326737 7 - 31377067 CTGCTCT i canFam3.chr33 C 0 C 0 e mm10.chr16 32794001 0 + 98207768 C e calJac3.chr17 73849024 48 + 74750902 T e nomLeu3.chr11 2945597 50 - 123690457 T a score=4852.000000 s hg38.chr3_KI270937v1_alt 69110 2 + 165607 CT s panTro4.chr3_GL389630_random 46176 2 - 103936 CT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387725 2 - 202140232 CT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945547 2 - 123690457 CC i nomLeu3.chr11 T 50 C 0 s rheMac3.chrUn_JH291127 105522 2 - 111706 CT i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419008 2 - 192460366 CT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340270 2 + 187378091 CT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365323 2 + 91754291 CT i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2326744 2 - 31377067 TT i canFam3.chr33 C 0 C 0 e mm10.chr16 32794001 0 + 98207768 C e calJac3.chr17 73849024 48 + 74750902 T a score=15990.000000 s hg38.chr3_KI270937v1_alt 69112 5 + 165607 GAGGC s panTro4.chr3_GL389630_random 46178 5 - 103936 GAGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387727 5 - 202140232 GAGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945549 5 - 123690457 GGGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105524 5 - 111706 GAGGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419010 5 - 192460366 GAGGC i macFas5.chr2 C 0 T 57 s papAnu2.chr2 187340272 5 + 187378091 GAGGC i papAnu2.chr2 C 0 T 57 s chlSab2.chr15 91365325 5 + 91754291 GAGGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73848976 5 + 74750902 GGGGT i calJac3.chr17 T 48 C 0 s canFam3.chr33 2326746 5 - 31377067 AAGGC i canFam3.chr33 C 0 C 0 e mm10.chr16 32794001 0 + 98207768 C a score=80968.000000 s hg38.chr3_KI270937v1_alt 69117 50 + 165607 CCGTGACGGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCGCTGCTCT s panTro4.chr3_GL389630_random 46183 50 - 103936 CCGTGACAGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCGCCGCTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387732 50 - 202140232 CCATGACGGGGTGATGACTGGATGGGGGCTATCGGAAGAGGCGCTGCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945554 50 - 123690457 CCATGAGGGGGTGATGACCGGATGGGGGCCGTCGGAAGAGGCGCCGCTCT i nomLeu3.chr11 C 0 T 57 s macFas5.chr2 192418958 50 - 192460366 CCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCGCTGCTGT i macFas5.chr2 T 57 T 57 s papAnu2.chr2 187340220 50 + 187378091 CCATGAGGGGGTGACGGCTGGATGGGGGCCGTCGGAAGAGGTGCTGCTGT i papAnu2.chr2 T 57 T 57 s calJac3.chr17 73848981 50 + 74750902 CCATGAGGTGGTGATGGCTGGCCGGGAGCCGTGGGAAGAAGCGCTGCTCC i calJac3.chr17 C 0 C 0 e mm10.chr16 32794001 0 + 98207768 C e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e rheMac3.chrUn_JH291127 105529 0 - 111706 C a score=2574.000000 s hg38.chr3_KI270937v1_alt 69167 2 + 165607 CT s panTro4.chr3_GL389630_random 46233 2 - 103936 CT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387782 2 - 202140232 CT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945547 2 - 123690457 CC i nomLeu3.chr11 T 57 C 0 s macFas5.chr2 192418951 2 - 192460366 CC i macFas5.chr2 T 57 C 0 s papAnu2.chr2 187340213 2 + 187378091 CC i papAnu2.chr2 T 57 C 0 s calJac3.chr17 73849031 2 + 74750902 CT i calJac3.chr17 C 0 T 57 e mm10.chr16 32794001 0 + 98207768 C e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e rheMac3.chrUn_JH291127 105529 0 - 111706 C a score=100057.000000 s hg38.chr3_KI270937v1_alt 69169 61 + 165607 GAGGCCCGTGACGGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCGCTGCTCTCTGAGG s panTro4.chr3_GL389630_random 46235 61 - 103936 GAGGCCCGTGACAGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCGCTGCTCTCTGAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387784 61 - 202140232 GAGGCCCATGACGGGGTGATGACTGGATGGGGGCTGTCAGAAGAGGCGCTGCTCTCTGAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945549 61 - 123690457 GGGGACCATGAGGGGGTGATGACCGGATGGGGGCCGTCGGAAGAGGCGCCGCTCTCTGAGG i nomLeu3.chr11 C 0 T 13 s macFas5.chr2 192418953 61 - 192460366 GGGGACCATGAGGGGGTGATGGCTGGATGGGGGCCGTCGGAAGAGGCGCTGCTGTCTGAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340215 61 + 187378091 GGGGACCATGAGGGGGTGACGGCTGGATGGGGGCCGTCGGAAGAGGTGCTGCTGTCTGAGG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73848976 61 + 74750902 GGGGTCCATGAGGTGGTGATGGCTGGCCGGGAGCCGTGGGAAGAAGCGCTGCTCCCTGAGG i calJac3.chr17 T 57 T 13 e mm10.chr16 32794001 0 + 98207768 C e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e rheMac3.chrUn_JH291127 105529 0 - 111706 C a score=1200.000000 s hg38.chr3_KI270937v1_alt 69230 2 + 165607 CC s ponAbe2.chr3 2387845 2 - 202140232 CC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192419014 2 - 192460366 CC i macFas5.chr2 C 0 T 1 s papAnu2.chr2 187340276 2 + 187378091 CC i papAnu2.chr2 C 0 T 1 e mm10.chr16 32794001 0 + 98207768 C e calJac3.chr17 73849037 13 + 74750902 T e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e rheMac3.chrUn_JH291127 105529 0 - 111706 C e nomLeu3.chr11 2945610 13 - 123690457 T e panTro4.chr3_GL389630_random 46296 0 - 103936 C a score=3382.000000 s hg38.chr3_KI270937v1_alt 69232 42 + 165607 CGTGACGGGGTGATGACTGGATGGGGGCCGTCGGAAGAGGCA s ponAbe2.chr3 2387847 42 - 202140232 AGTGAGGGGGTGATGACTGGATGGGGGCTGTCGGAAGAGGCG i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32794001 0 + 98207768 C e calJac3.chr17 73849037 13 + 74750902 T e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e papAnu2.chr2 187340278 1 + 187378091 T e macFas5.chr2 192419016 1 - 192460366 T e rheMac3.chrUn_JH291127 105529 0 - 111706 C e nomLeu3.chr11 2945610 13 - 123690457 T e panTro4.chr3_GL389630_random 46296 0 - 103936 C a score=10465.000000 s hg38.chr3_KI270937v1_alt 69274 14 + 165607 CTGCTCTCTGAGGA s panTro4.chr3_GL389630_random 46296 1 - 103936 -------------A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387889 14 - 202140232 CTGCTCTCTGAGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945597 14 - 123690457 CCGCTCTCTGAGGA i nomLeu3.chr11 T 13 C 0 s calJac3.chr17 73849024 14 + 74750902 CTGCTCCCTGAGGA i calJac3.chr17 T 13 C 0 s mm10.chr16 32794001 14 + 98207768 CTGCTCTCTGAAGA i mm10.chr16 C 0 C 0 e canFam3.chr33 2326751 0 - 31377067 C e chlSab2.chr15 91365330 0 + 91754291 C e papAnu2.chr2 187340278 1 + 187378091 T e macFas5.chr2 192419016 1 - 192460366 T e rheMac3.chrUn_JH291127 105529 0 - 111706 C a score=890753.000000 s hg38.chr3_KI270937v1_alt 69288 236 + 165607 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCAATGTCAATATGTCCATTGTGAGTGTCTTTGCCTCTTCAGAGCTGTCATCGGTGCAAAGGGTGTCAAAGATGGCTTCCTCGGGATCACTGCCTGTGATGGTCTGAACTGTGGTCATTCCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACGGAGGTGGCGATCAGCACCATGAAGTTGGGAGAT---G---TTTTTGTGAAAC s panTro4.chr3_GL389630_random 46297 236 - 103936 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCAATGTCAATATGTCCATTGTGAGTGTCTTTGCCTCTTCAGAGCTGTCATCGGTGCAAACGGTGTCAAAGATGGCTTCCTCGGGATCACTGCGTGTGATGGTCTGAACTGTGGTCATTCCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACAGAGGTGGTGATCAGCACCACGAAGTTGGGAGAT---G---TTTTTGTGAAAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2387903 236 - 202140232 CAGCACCTTAGCTTCTGTGGAGGTGTGAGCCAATGTCAATATGTCCATTGTGAGTGTCTTTGCCTCTTCAGAGCTGTCATCGGTGCAAAGGGTGTCAGAGATGGCTTCCTCTGGATCACTGCCTGTGACAGTCTGAACTGTGGTCATTCCAGCTCCCTCGGGGCTGCCACTGGCGGCTGATGTCTCCACAGAGGTGGCGATCAGCACCCTGAAGTCGGGAGGT---G---TTTTTGTGAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945611 236 - 123690457 CAGGCCCTTAGCTTCTTTGGAGGTGTGAGCCAATGTCAATATGTCCATTGCGAGTGTCTTTGCCTCTTCAGAGCTGTCATCGGTGCAAAGGGTGTCAAAGATGGCTTCCTCGGGATCACTGCCTGTGACGGTCTGAACTGTGGTCATTCCGCCTCTCTCGGGGCTTCCACTGGCGGCTGATGTGTCCACAGAGGTGGCAATCAGCACCATGAAGTCGGGAGGT---G---TTTTTGTGAAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105529 236 - 111706 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCACTGTCAATATGTCCGTTGTGCGTGTCTTTGCCTCTTCAGAGCTATCATCGGTGCGAAGGGTGTCAAAGACGGCTTCCTTGGGATCACTGCCTGTGACGGTCTCAGCTGTGGTCATTCCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCTCCACAGAGGTGGTGATCAGCACCGTGCGGTCGGGAGGT---G---TTTCTGTGGAAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419015 236 - 192460366 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCAATGTCAATATGTCCGTTGTGCGTGTCTTTGCCTCTTCAGAGCTATCATCGGTGCGAAGGGTGTCAAAGACGGCTTCCTTGGGATCACTGCCTGTGACGGTCTCAGCTGTGGTCATTCCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCTCCGCAGAGGTGGCGATCAGCACCGTGCGGTCGGGAGGT---G---TTTCTGTGGAAG i macFas5.chr2 T 1 C 0 s papAnu2.chr2 187340277 236 + 187378091 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCGACGTCGATATGTCCGTTGTGCGTGTCTTTGCCTCTTCAGAGCTATCATCGGTGCGAAGGGTGTCAAAGACGGCTTCCTTGGGATCACTGCCTGTGATGGTCTCAGCTGTGGTCATTCCAGGTCCCTCGGGGCGGCCAGTGGCGGCGGATGTCTCCGCAGAGGTGGCGATCAGCACCGTGCGGCCGGGAGGT---G---TTTCGGTGGAAG i papAnu2.chr2 T 1 C 0 s chlSab2.chr15 91365330 236 + 91754291 CAGGCCCTTAGCTTCTGTGGAGGTGTGAGCCAATGTCAATATGTCCATTGTGCGTGTCTTTGCCTCTTCAGAGCTATCATCGGTGCGAAGGGTGTCAAAGACGGCTTCCTTGGGATCACTGCCTGTGACGGTCTCAGCTGTGGTCATTCCAGGTCCCTCGGGGCTGCCAGTGGCGGCGGATGTCCCCGCAGAGGTGGCGATCAGCACCGTGCGGTCGGGAGGT---G---TTTCTGTGGAAG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73849038 239 + 74750902 CAGGCCCTCCGCTTCTGCGGAGCCGTGAGCCAGCGGCAACAGGGCAACAGTGAGTGTCTTTGCCTCTTCAGAGCTGTCATCGGTGCACAGGGTGTCAAAGACGATGTCCTCAGGATCACGGCCTGTGACGGTCTCAAGGGTGGTCGTTCCAGCTCCCTCGGGGCTGCCCCTGGTGACTGACGTCTCCAGGGAGGTGGCGATGACCACCACGAAGTCGGGAGGTACGA---TTTTTGTGACGA i calJac3.chr17 C 0 C 0 s mm10.chr16 32794015 233 + 98207768 CAGGTACTCCACTTCCGTGGAGGTGTGTGCCAACGTCAGGAGGTCAACTGTGATCTTCCTTGCCTCTTCAGAGCTGTCATCGGTACAAAGGGTGTCAAAGACGGCTTCTATGGAGTCCCACACTGTGCCAGTTTGGACAGTGCTCATCCCAGTTCT---GGGGCTGTTGCTTGGTGCCAATGTCTCTGTAGGGATGGTGTGCATAACCGTGAGGTCAGAAGGT---A---TTCTTATTGAAA i mm10.chr16 C 0 I 435 s canFam3.chr33 2326751 239 - 31377067 CAGGCCTTCAGCTTCCACAGAAGTGTGAGCCAATGTCAAGACGTCAATTGTGATCCTCTTTGCCTCTTCCGAACTGTCATCAGTACAAAGGGCATCGAAGACAGATTTTGCAAGATCACTGCCTGTAACAGTCTCAACTGTGGTCATCCCAGTTCCCACGGGGTTGCCACTGGTGGCCGATGCCTCCATAGGAGTGGTGATCACCACCGTGAACTTGGAAGGT---GTCATTTTGGTGAAGG i canFam3.chr33 C 0 C 0 a score=359282.000000 s hg38.chr3_KI270937v1_alt 69524 151 + 165607 TCCTGGTCTCTCTTGCAGGGGAAATTCTCTTGGATCCCCTGGTCTCTGCTTCTGGAACGGGGCCGGCTGGGGTTGAGGCCCTAGAAGAGGTCTCAGCGCTCAGTGTTTGAGTTTCCAGAGCGGC----------------GTGGCCCG-------------GTG---------------------------------------------------------CTA-------------GAGTCATAGCGGG s panTro4.chr3_GL389630_random 46533 151 - 103936 TCCTGGTCTCTCTTGCAGGGGAAATTCTCTTGGCTCCCCTGGTCTCTGCTTCTGGAATGGGGCCGACTGGGGTTGAGGCCCTAGAAGAGGTCTCAGCGCTCAGCGTTTGAGCTTCCAGAGCGGC----------------GTGGCCCG-------------GTG---------------------------------------------------------CTG-------------GAGTCATAGCGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2388139 151 - 202140232 TCCTGGTCTCTCTTGCAGGGGAAATTCTCTTGGCTTCTCTGGTCTCTGCTTCTGGAATGGGGCCGGCTGGGGTTGAGGCCCTAGAAGAGGTCTCAGCGCTCAGCGTTTGAGTTTCCAGAGCGGC----------------GTGGCCTG-------------GTG---------------------------------------------------------CTG-------------GAGTCATAGCGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945847 151 - 123690457 TCCTGGTCTCTCTTGCAGGGGAAATCCCCTTGGCTCCCCTGGGCTCTGCTTCTGGAATGGGGCCGGCTGGGGTTGCGGCCCTAGAAGAGGTCTCGGCACTCAGCGTTTGAGTTTCCAGAGAGGC----------------GTGACCCG-------------GTG---------------------------------------------------------CTG-------------GAGTCATAGCGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105765 115 - 111706 TCCTGGT------------------------------------CTCTGCTTCTGGAATGGGGCCGGCTGGGGTTAAGGACCTACAGGAGGTCTCGGCACTCAGAGTTCGAGTTTCCAGAGTGGC----------------GTGGCCTG-------------GTG---------------------------------------------------------CTG-------------GAATCATAGCGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419251 115 - 192460366 TCCTGGT------------------------------------CTCTGCTTCTGGAATGGGGCCGGCTGGGGTTAAGGACCTACAGGAGGTCTCAGTACTCAGAGTTCGAGTTTCCAGAGCGGC----------------GTGGCCTG-------------GTG---------------------------------------------------------CTG-------------GAATCATAGCGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340513 112 + 187378091 TCCTGGT------------------------------------CTCTGCTTCTGGAATGGGGCCGGCTGGGGTT---GACCTACAGGAGGTCTCGGCACTCAGAGTTTGAGTTTCCAGAGCGGC----------------GTGGCCTG-------------GTG---------------------------------------------------------CTG-------------GAGTCAGAGCGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365566 115 + 91754291 TTCTGGT------------------------------------CTCTGCTTCTGGAATGGGGCCGGCTGGGGTTGAGGACCTACAGGAGGTCTCAGCACTCAGAGTTTGAGTTTCCAGAGCGGC----------------GTGGCCTG-------------GTG---------------------------------------------------------CTG-------------GAATCATAGTGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73849277 151 + 74750902 TCCTGGTCTCTGTTGCAGGGGAAATGGTCTCGATTCCCCTGGTCTCTGCTACCGGAATGGGGCCGGCTGGGTCTGAGGTCCTTGAAGAGGTCTGGGGGCTCCGCGTTTGAGATTCTGAAGCAGC----------------GTGGCTGG-------------GTG---------------------------------------------------------CTG-------------AGGTCTCAGTGAG i calJac3.chr17 C 0 I 62 s mm10.chr16 32794683 193 + 98207768 TCCTGGTCTTTGTTACAAAAGAGGTGGTCTGAGTGTCTCTGGAATTGACCTCTGAACTGATACTAGTTGCACTTAAAGCATTAGAAGCAGATTCAGTGCTGAGAGTTTGCGTGTCTAGAGGTACATACTGAATCAGGTTGGTGGTCTGGAAAGCTCTCTCTGAG---------------------------------------------------------CTGGGCCTGTCCCTTTGAGTGAAGGTGGA i mm10.chr16 I 435 C 0 s canFam3.chr33 2326990 208 - 31377067 CCCTGCCTTCCATTGCAGGAAAAGTGGTTTTGGTGTCCCTGGTCTCTGCTTCTGAATTGCTGTTGGCCAGGATTAAGGTCCAATCAAACGTCTGGGGGCTCAGGGTTTGAGTTTCCAAAGGCAT----------------GTGGCTTG-------------GCACAGAGGTCTCAAGAAGGTCAGCGGTCTGGAAGGCTCCTTCTGAATTTGTCCTGACCCCTG-------------GAGTCATGGCAGG i canFam3.chr33 C 0 C 0 a score=53202.000000 s hg38.chr3_KI270937v1_alt 69675 17 + 165607 CACTTCTGTGTCGTCCG s panTro4.chr3_GL389630_random 46684 17 - 103936 CACTTCTGTGTCGTCCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2388290 17 - 202140232 CACTTCTGTGTCCTCCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2945998 17 - 123690457 CACTTCTGTGTCGTCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105880 17 - 111706 CACTTCTGTGTCGTCCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419366 17 - 192460366 CACTTCTGTGTCGTCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340625 17 + 187378091 CACTTCTGTGTCGTCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365681 17 + 91754291 CACTTCTGTGTCGTCCA i chlSab2.chr15 C 0 C 0 s mm10.chr16 32794876 17 + 98207768 CACTTCCATGTTGTTGG i mm10.chr16 C 0 C 0 s canFam3.chr33 2327198 17 - 31377067 CTCTTCTACGTGGTTTG i canFam3.chr33 C 0 C 0 e calJac3.chr17 73849428 62 + 74750902 I a score=1256536.000000 s hg38.chr3_KI270937v1_alt 69692 397 + 165607 TTGTCATCGCAGTGTCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGTTAAGACTGACTTGGTGAGCC-TGGGTTCCAGTG----GACT----TCACACAAGCTATTGCATTTACACCCTGGGCACTTCTGGGAGGAGGGTGGGGCAGGGGAG-TGCCGTTACCTCATTTTTCATCTACATAAGCGAACAAGAAGGAGGCAGTCCTGGGAAGCCCAGGCCTGTGTGGCAGCCATGGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAACCCTGACAACTCACTTGGGGCCAGCAAGCCCCAGGATC-TGCTGGCTATCGGCCTGCGTCTTTAAGAGGGGATGTGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----CCAGCGTCCAGGACTCGCAGAGC s panTro4.chr3_GL389630_random 46701 397 - 103936 TTGTCATCGCAGTGTCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGTTAAGACTGACTTGGTGAGCC-TGGGTTCCAGTG----GACT----TCACACAAGCTATTGCGTTTACGCCCTGGGCACTTCTGGGAGGAGGGCGGGGCGGGGGAG-TGCCGTTACCTCACTTTTCATCTACATAAGCGAACAAGAAGGAGGCAGTTCTGGGAAGCCCAGGCCTGTGTGGCAGCCATGGAGCTGGGGTTGCCATGGCTGGCGTCCTCTGAAGCCCTGACAACTCACTTGGGGCCAGCAAGCCCCAGGATC-TGCTGGCTATCGGCCTGCGTCTTTAAGAGGGGATGTGTGGGGC----CAGTGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----CCAGCGTCCAGGACTCGCAGAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2388307 397 - 202140232 TTGTTATCGCAGTGTCTGCTCTGCGGGTGCTGAGGCCTGTGTTGGTTAAGACTGACTTGGTGAGCC-TGGATTCCAGTG----GACT----TCACACAAGCTATTGTGTTTACACCCTGGGCACTTCTGGGAGGAGGGTGAGGAGGGGGAG-TGCCATTACCTCATTTTTCATCTACATAAGTGAATAAGAAGGAGGGAGTCCTGGGAAGCCCAGGCCGGTGTGGCAGCCACGGAGCTGGGGTTGCCGTGACTGGCATCCTCTGAAGCCCTGACAACTCACTTGGGGCCAGCAAGCCCCGGGATC-TGCTGGCTGTTGGCTTGCATCTTTAAGAGGGGATGTGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----CCAGCATCCAGGACTCGCAGAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2946015 395 - 123690457 TTGTCGTCGCAGTGTCTGCTCTGCGGGTGCTGGGGCCTGTGTTGGTTAAGACTGACTTGTTGAGCC-TGGGTTCCAGTG----GGCT----TCACACAAGCTATCGCGTTTACACCCTGGGCACTTCTTGGGGGAGGGTG-GGCAGGGGAG-TGCCGTTACCTCATTTTTCATCTACATAAGCGAACAAGAAGGAGGGAGTCCTGGGAAGCCCAGGCCCA-GCGGCAGCCACGGAGCTGGGGTTGCCATGACTAGCGTCCTCTGAAGCCCCGACAGCTCACTTGGGGCCAGCAAGCCCTGGGATC-TGCTGGCTCTCGGCCTGCGTCTTTAAGAGGGGATGTGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----CCAGCGTCCAGGACTCGCAGAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 105897 397 - 111706 TTGTCATCGCAGCGTCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGTTAAGATTGACTTGGTGAGCC-TGGGTTCCAGTG----GACT----TCACGCAAGCGATTTCGTTTACACCCTGGGCACTTCTGGGAGGAGGGTGGGGAGGGGAAG-TGCTGTTACCTCCTTTTTCATCTACATAAGCGAACAAGAAGGAGGCAGTCCTGGGAAGCCCAGGCCCATGTGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACTCACTAGGGGCCAGCAAGCCCCGGGATC-TGCTGGCTCTCGGCCTGCGTCTTTAACAGGGGATGAGTGGGGC----CAGCGCCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----GCAGCGTTCAGGACTCGCAGAGC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419383 397 - 192460366 TTGTCATCGCAGCGTCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGTTAAGATTGACTTGGTGAGCC-TGGGTTCCAGTG----GACT----TCACGCAAGCGATTTCGTTTACACCCTGGGCACTTCTGGGAGGAGGGTGGGGAGGGGAAG-TGCTGTTACCTCCTTTTTCATCTACATAAGCGAACAAGAAAGAGGCAGTCCTGGGAAGCCCAGGCCCATGTGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACTCACTAGGGGCCAGCAAGCCCCGGGATC-TGCTGGCTCTCGGCCTGCGTCTTTAACAGGGGATGAGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----GCAGCGTCCAGGACTCGCAGAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187340642 397 + 187378091 TTGTCATCGCGGCGTCTGCTCTGCGGCTGCTGGGGCCTGTGTTGGTTAAGATTGACTTGGTGAGCC-TGGGTTCCAGTG----GACT----TCACGCAAGCGATTTCGTTTACACCCTGGGCACTtctgggaggagggtggggaggggaag-tgcTGTTACCTCCTTTTTCATCTACATAAGCGAACAAGAAGGAGGCAGTCCTGGGAAGCCCAGGCCCGTGTGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACAACTCACTAGGGGCCAGCAAGCCCCCGGATC-TGCTGGCTCTCGGCCTGCGTCTTTAACAGGGGATGAGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----GCAGCGTCCAGGAGCCGCAGAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91365698 397 + 91754291 TTGTCATCGCAGCATCTGCTCTGTGGCTGCCGGGGCCTGTGTTGGTTAAGATTGACTTGGTGAGCC-TGGGTTCCAGTG----GATT----TCACACGAGCGATTTCGTTTACACCCTGGGCACTTCTGGGAGGAGGGTGGGGAGGGGAAG-TGCTGTTACCTCCTTTTTCATCTACATAAGCGAACAAGAAGGAGGCAGTCCTGGGAAGCCCAGGCCCGTGTGGCAGCCACAGAGCTGGGGTTGCCATGACTGGCGTCCTCTGAAGCCCTGACCACTCACTAGGGGCCAGCAAGCCACGGGATC-TGCTGGCTCTCGGCCTGCGTCTTTAACAGGGGATGAGTGGGGC----CAGCGTCCACCTTCCAGGGTGAGCCAAGAAG--------------------------GCAGA-----GCAGCGTCCAGGACTTGCAGAGC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73849490 299 + 74750902 CTGTCATCGCATTTTCTGGGCTGCTGGTGCCAGGGCCTGTGGTGGTTAAGACTGACTCGGTGA----------------------CT----TCACGCAAGCGACTGTGTTTATACCCTGCGCACCTCTGGGAGGAGGGTGGGGACGGGCAG-TGCTGTTACCTCGTTTTTCATCTGCATAAGCAAAGAAG---------------------------------------------------------------------------------GACAACCCACTTGGGGCCAGCAAGCCCCGGGATC-CTGTGGTTCTCGGCCTGCGGCTTTGAGAAGGGATGTGTGGGGC----CAGTGTCCGCCTTCCAGGGTGAGCCAAGAAG--------------------------ACAGA-----GCAGTGGCCAGGACTCGAGGAGC i calJac3.chr17 I 62 C 0 s mm10.chr16 32794893 348 + 98207768 TTGTCACCAAAGGAACTGATCTGCTAATGTCGAGACCTGTGTGGGATGAGAACAACCTGGTGA-------GTGCCAGTG----GACTGACATCACA-----------GTTTATGCCCTAGGTGCTATT----GGATGGCATGGAGGG-------------------TCATCATCTACATAAACCTAGAGGATGAAGGCAGCACAGAGAAGCCAAAGCCTTCACAGCAGCCCCGAAGAC-ATGCTACCCCAACTAGTGCTCTCTGAAGCCCTGACAACTGCCCCCTGCCCCAAAGGATCC-----C-AGCTGACCCCGGGTCTACAGCTC-----------------AGCCTCACAGCATATACCGACTAAGGCAGGCAAAGAAG--------------------------ACAGGAATCCACATGAGCCAAGGACTGCAGAGC i mm10.chr16 C 0 I 1607 s canFam3.chr33 2327215 418 - 31377067 CTGTCACCACAGGACCTGGTCTGCTGGTGCTGGGGCCTGTGTTGGGTAAGACCAGCTTTGTAAGCCACGAGTCCCAGTGGGCCGACT----TCGCACAAGCTCTTGTGCTTATGCCCTGGGCACC-CTGGGAGGAGGGTGGGGAGGGGAAGTTGCTTCTATTTCATTTTTCATCTACACATACAAGGAAGGAGGAGGTGTATC--AGAAGACCGGCCCCATGGGTCAACCATGGAACTGGGATC-CCCTGACTGATGTCCTCT--------GATGACCCTGTTGAGACAAGCAGGCCTCAGAATTGAGTTGATTATTGGTCTGAAGCCATCAGAGGGAAGGCTTGGGGC----CAGGACACAGCCTTGATGGGGGGCAAAGAAGCCAGGAGTCTAAGTGAGCCGAGAACTACAGA-----GCAGGGACCAGGACTCTCAGAAT i canFam3.chr33 C 0 C 0 a score=897333.000000 s hg38.chr3_KI270937v1_alt 70089 355 + 165607 TTTCTG-----AACCTCTGTCGCCTTCCC-CGGGTACTTTTCTCATCCAACACATAGTTCCCCATGGAAGTAAAAACCCTTAAAAGACGAGAAAGGCCTATGATTGTGCCTTTCGGGGTAGCTGGGTGGATTGAGGCGGGGGAACCTCCAGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGAGCCGGCAGAGTCCTTGGGGCTCCGGCAAGGGAAAGACGGCACCCCCCACCCTGCCGAGGCCCCTCCTGAATGAGGGCCGAGAACTGCAGGGTTGGAGCCTGGGAACCATGGAAACCGTGGCCAGGCATTTTCCACAGGACAC-------CGGGAGCC-CCTGAGGCAA---CACCTAGCTTTTCA-------- s panTro4.chr3_GL389630_random 47098 356 - 103936 TTTCTG-----AACCTCTGTCCCCTTCCC-CGGATACTTTTCTCATCCAACACATACTTCCCCATGGAAGTAAAAACCCTTAAAAGATGAGAAAGGCCTATGATTTTGCCTTTCGGGGTAGCTGGGTGGATTGAGGGGGGGGAACCTCCAGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGAGCCGGCAGAGTCCTTGGGGCTCCGGCAAGGGAAAGAGGGCACCCCCCACCCTGCCGAGGCCCCTCCTGAATGAGGGCTGAGAACTGCAGGGTTGGAGCCTGGGAACCATGGAAACCGTGGCCAGGCATTTTCCACAGGACAC-------CGGGTGCCAGCTGAGGCAA---AACCTAGCTTTTCA-------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2388704 354 - 202140232 TTTCTG-----AACCTGTGTCCCCTTCCT-CAGATACTTTTCTCATCCAACACATGCTTCCCTATGGAAGTAAAAACCGTTGAAAGATGAGAAAGGCCTATGATT-TGCCTTTCAGGGTAGCTGAGTGGATTGAGGGGAAGGAACCTCCTGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAACGAGGGAGCTGGCAGAGTCCTTGGGGCTCCAGCAAGGGAAAGAGGGCACTCCCCACCCTGCCGAGGCCCCTCCTG-ATGAGGGCTGAGGACTGCAGGGTTGGAGCCTGGGAACCATAGAAACCGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGCAA---AACCTAGCTTTTCA-------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2946410 355 - 123690457 TTTCTG-----AACCTGTGTCTCCTTCCC-CGGATACTTTTCTCATCCAACACAGGCTTCCCCATGGAAGTAAAAACCCTTAAAAGACGAGAAAGGCCTATGATT-TGCCTTTCGGGGTAGCTGGGTGGATTGAGGGGGAGGAACCTCCAGCGACAGGGTGGGCAGTGCTGCT-----GCCGAAGCGAGGGAGCTGGCAGAGTCCTTGGGGCTCTGGCAAGGGAAAGAGGGCGCTCGCCACCCTGCCGAGGCCCCTCCTGAATGAGGGCTGAGGACTGCAGGGTTGGAGCCTGGGAACCACAGAAACTGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGAAA---AACCTAGCTTTCCA-------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 106294 340 - 111706 TTTCTG-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACATACCTCCCCACGGAAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGGGTGGCTGGGTGGACCGAAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGGGCCGGCAGAGTCCTTGGGGCTCCGGCAAGGGAAACAGGGTG--CCCCACCCTGCCAAGGCCCCTCCTGAATGA-GGCTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAACTGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGCAA---AACCTAGCCTTTCA-------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192419780 340 - 192460366 TTTCTG-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACATACCTCCCGACGGAAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGGGTGGCTGGGTGGACCGAAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGGGCCGGCAGAGTCCTTGGGGCTCCGGCAAGGGAAACAGGGTG--CCCCACCCTGCCAAGGCCCCTCCTGAATGA-GGCTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAACTGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGCAA---AACCTAGCCTTTCA-------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187341039 340 + 187378091 TTTCTG-----AACCTGTGTCCCCTTCCC-TGGCCACGTTTCTCATCCAACACATACCTCCCCACGGAAGTCAAAACCCTTCAAAGATGAGAAAG------------GCCTTTCGGGGTGGCTGGGTGGACCGAAG-GGAGGAACCTCCAGAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGGGCCGGCAGAGTCCTTGGGGCTCCGGCCAGGGAAACAGGGCG--CCCCACCCTGCCAAGGCCCCTCCTGAATGA-GGCTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAACTGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGCAA---AACCTAGCCTTTCA-------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91366095 340 + 91754291 TTTCTG-----AACCTGTGTCCCCTTCCC-CGGCCACTTTTCTCATCCAACACATACTTCCCCACGGAAGTCAAAACCCTTCAAAGATGAGACAG------------GCCTTTCGGGGTAGCAGGGTGGACCGAAG-GGAGGAACCTCCAAAGACAGGGTGGGCAGTGCTGCT-----GCCAAAGCGAGGGGGCCGGCAGAGTCCTTGGGGCTCTGGCAAGGGAAACAGGGCG--CCCCACCCTGCCAAGGCCCCTCCTGAATGA-GGCTGAGAACTGCAGGGTTGGAGCCCGGGAACCACAGAAACAGTGGCCAGGCATTTTCCACAGGACAC-------AGGGAGCCAGCTCAGGTAA---AACCTAGCCTTTCA-------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73849789 281 + 74750902 -TTCTG-----AACCTGTGTCACCTTCCC-GGGACACTTTTCTCATCCACCATACGCTTCCCCATGGAAG-------------------------------------------CAGAGTGACGG-------------GGAGGAGCCGCCAGAGGCAGGGTGGGGAGCGCTGCTCAGAAGCCACAG---AGCAGCAGGCAGAGTCTTTGAGGCTCCGGCAAGTGAATCAGAGCACTCTCCGCCCTGCCG------------------GGCCAAGAACCACAGGGCGGGAGCAGGAGAGCCACAGAAAC--TGGCCAGGCATTTCCCACATGACAC-------ACGGAGCCAGCTCAGGCAA---AACCTAACTTTTCA-------- i calJac3.chr17 C 0 I 332 s canFam3.chr33 2327633 312 - 31377067 -TTTTGGAAGAAATCCCTGTCACCTGCCCATCGAAACTTCCCTCATCCAGCAGGTGTTTCCCCACGGAAGTAAAAACCCTTCAAATACAGGAAACATCTGTGGTTTTGTACTTAGAGGTAGCTGGGAGGAGTAGGGGAGAGGCAGCTACCCAGACCGAGCAGG---------T---------------GGGAGCAGGC-GAGTCTGGGGG--------AAGGG-------------CCAAGCTTCCCAGCGCTGCTC---------GCCCGA-----------------CCCCAGGGCCGCAGGAACAGGGCCCAGCCACGTGCCACGGGTAACGGAGCCGAGGGACGCAGCCCTGTCCACTTGACAGACCCTTGGAGGTTGTAT i canFam3.chr33 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I a score=86163.000000 s hg38.chr3_KI270937v1_alt 70444 27 + 165607 GAGAGC--GGCTG-CCGGCACTT-CTGCCCA s panTro4.chr3_GL389630_random 47454 27 - 103936 GAGAGC--GGCTG-CCGGCACTT-CTGCCTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2389058 27 - 202140232 GAGAGC--GGCTG-CTGGCACTT-CTGCCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2946765 27 - 123690457 GAGAGC--GGCTG-CTGGCACTT-CTGCCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 106634 27 - 111706 GAGAGC--GGCTG-CTGGCACTT-CTGCCTA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192420120 27 - 192460366 GAGAGC--GGCTG-CTGGCACTT-CTGCCTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187341379 27 + 187378091 GAGAGC--GGCTG-CTGGCACTT-CTGCCTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91366435 26 + 91754291 GAGAGC--GGCTG--TGGCACTT-CTGCCTA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850402 27 + 74750902 GAAAGG--GGCTC-CTGGCGCTT-CTGCCTA i calJac3.chr17 I 332 C 0 s canFam3.chr33 2327945 31 - 31377067 GAGTGCTGGGCTGGGTGGCACTCGCTGCCCA i canFam3.chr33 C 0 I 219 e mm10.chr16 32795241 1607 + 98207768 I a score=140494.000000 s hg38.chr3_KI270937v1_alt 70471 49 + 165607 GAGCAGAGGCCTGTTCCCTTGACTGGCCCTGAGGTGGGAGGAAT--GGGAG s panTro4.chr3_GL389630_random 47481 49 - 103936 GAGCAGAGGCCTGTTCCCTTGACTGGCCCTGAGGTGGGAGGAAT--GGGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2389085 49 - 202140232 GAGCAGAGGCCTGTTCCCTTAACTGGCCCTGAGGTGGGAGGAAC--AGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2946792 49 - 123690457 GAGCAGAGGGCTGCTCCCTTGCCTGGCCCTGAGGAGGGAGGAAT--GGGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 106661 49 - 111706 GAGCAGAGGCCTGTTCCCTTGACTGGCCCTGAGGTGGGAGGAAC--GGGGG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192420147 49 - 192460366 GAGCAGAGGCCTGTTCCCTTGACTGGCCCTGAGGTGGGAGGAAC--GGGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187341406 49 + 187378091 GAGCAGAGGCCTGTTCCCTTGACtggccctgaggtgggaggaac--ggGGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91366461 51 + 91754291 GAGCAGAGGCCTGTTCCCTTGACTGGCCCGGAGGTGGGAGGAACGGGGGGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850429 49 + 74750902 GAGCAGAGGCCTGTTTCTTTAACTGGCCTGGAGGCCATAGGAAC--AGAGG i calJac3.chr17 C 0 T 386 e mm10.chr16 32795241 1607 + 98207768 I e canFam3.chr33 2327976 219 - 31377067 I a score=688272.000000 s hg38.chr3_KI270937v1_alt 70520 293 + 165607 TCCCCGAGGGAGGCTACGGTAGGAtatcttccctagagacagggtcttgctctgttgcccaggcaggtcttgaattcctgggctcaagcgatcctcctgcctcagcctcttgagtagtttactacaagATCTTTTCTGGCCTGAGAAAGGGG----GCCTCCCCTGTCTAGAGGGAGATCGGGCTCTCCCTGTGAGTGGGCCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatacagggtactcggttaaatttgaactcgcagttcagataaatg---------acgaataa s panTro4.chr3_GL389630_random 47530 293 - 103936 TCCCCGAGGGAGGCTACGGTAGGATAttttccccagagacagggtcttgctctgttgcccaggcaggtcttgaattcctgggctcaagcgatcctcctgcctcagcctcTTGAGTAGTTTACTACAAGATCTTTTCTGGCCTGAGAAAGGGG----GCCTCCCCTGTCTAGAGGGAGATCGGGCTCTCCCTGTGAGTGGGCCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatacagggtactcggttaaatttgaacttgcatttcagataaacg---------acgaataa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2389134 293 - 202140232 TCCCTGAGGGAGGCTACGGTATGATAttttccccagagacagggtcttgctctgttgcccaggcaggtcttgaattcctgggctcaggcgatcctcctgcctcagcctcttgtgtagtttactacaagATCTTTTCCGGCCTGAAAAAGGGG----GCCTCCCCTGTCTAGAGGGAGATCGGGCTCTCCCTGTGAGTAGGGCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatacagggtacttggttaaatttgaacttgcatttcagataaatg---------acgaataa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2946841 291 - 123690457 -CCCCGAGGGAGGCTACGGTAGGATACtttccccagagacagggtcttgctctgttgcccaggcaggccttgaattcctgggctgaagcgaccctcctgcctcagcctcTTGCGTAGTTCACTACAAGATCTTTTCTGGCCTGAGAAA-GGG----GCCTCCCCTGTCTAGAGGGAGATGGGGCTCTCCCTGTGAGTAGGCCAAGGAGCCTCTTGGAGagagtttctagatttagcaaataaaaatacagggtactcggttaaatttgaacttgcatttcagataaatg---------acgaataa i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 106710 303 - 111706 -CCCCGAGGGAGGCCACGGTAGGATAttttccccagagacaggatcttgctttgttgcccaggcaggtcttgaattcctgggctcaagtgatcctcctgccccagcctcTTGAGTAGTTTACTGCAAGATCTTTTCTGGCCTGAGGAAGGGGGG--GCCTCTCCTGCCTGCAGGGAGATCGGGCTCTCCCTGGGAGTGGGCCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatatagggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192420196 303 - 192460366 -CCCCGAGGGAGGCCACGGTAGGATAttttccccagagacaggatcttgctttgttgcccaggcaggtcttgaattcctgggctcaagtgatcctcctgccccagcctctggagtagttTACTGCAAGATCTTTTCTGGCCTGAGGAAGGGGGG--GCCTCTCCTGCCTGCAGGGAGATCGGGCTCTCCCTGGGAGTGGGCCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatatagggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187341455 303 + 187378091 -CCCCGAGGGAGGCCACGGTAGGATATTTT-cccagagacaggatcttgctctgttgcccaggcaggtcttgaattcctgggctcaagtgatcctcctgccccagcctcttgagtagtttaCTGCAAGATCTTTTCTGGCCTGAGAAAgggggggTGCCTCTCCTGTCTAGAGGGAGATCGGGCTCT-CCTGTGAGTAGGCCACGGAGCCTCTTGGAGAGGGTTtctagatttagcaaataaaaatatagggtactcagttaaatttgaacttGCATTTCAGATAAATGCAAGTTTATCTGAATAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91366512 304 + 91754291 -CCCCGAGGGAGGCCACAGTAGGATAttttccccagtgacaggatcttgctctgttgcccaggcaggtcttgaattcctgggctcaagtgatcctcctgccccagcctgttgagtagttTACTGCAAGATCTTTTCTGGCCTGAGAAAGGGGGGGTGCCTCTCCTGTCTAGAGGGAGATCGGGCTCT-CCTGTGAGTAGGCCAAGGAGCCTCTTGGAGagggtttctagatttagcaaataaaaatatagggtactcagttaaatttgaacttgcatttcagataaatgcaagtttatctgaataa i chlSab2.chr15 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850478 386 + 74750902 T e canFam3.chr33 2327976 219 - 31377067 I a score=3026913.000000 s hg38.chr3_KI270937v1_alt 70813 1263 + 165607 ctttttagcatgagtatttctcatgcaatattggctacgtacttacact---------taaaaaaaaattgttacctgaaattcaaatgtaactggatgccctgtgttttatctggtaatcccaGTCTTGGAAGGAAAAGGATC-AAATACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTGCAGCCCACACAGCTGGAAGCCCAAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACAGGGTTTGAGATGGTCTTTACCCGGCTCCACTGGCCCAAAAGTAGCTCATAGA-CCCAAAAGAGGCCTAGCACC------TCTCCCCAGGACGTCAGGATGGGGCTCCAGGTCCCCAGCTGGTTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGGAGTCAAGAGCCTCGGTTGCAGCTCCCGCTGTGCCGCCCACGaccggctctggggtcagatgatctgctggttcaaatcctgactcagcctcctactagccaggccagtctctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaacgtggtgaggaccagcggagaagatgaaaggg------cttatattccaaagcccacaagg------taagcATCCCT-CCCCATGGAGTCCTCTCCCGGGCCCCTGGAAAGCACGCATAGTCGATTTGACTATAGTGAGGAGTGCGGGCTGCACCCCCAGGCAGTATAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCGGTGCGGCCCAGCTGCACACACAAATCTCACCTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAGCCCG-------ACTTCCCCTGGCACATTTTCTGGCTTATCCAGGAGCCCCGGGGTGTCCTTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCTC---------------GGGTCC------------------------------AAGGGGGTCTTCTCGAATACAGCAAATCCCAGCCCAGCCCCCTCAGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gccctgtgaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagctaaCGGGAC-------------ACGTGCAGCGCAGACCAGGCCACGGTGAGCACAGGCAG s panTro4.chr3_GL389630_random 47823 1257 - 103936 ctttttagcatgagtatttctcatgcaatattggctacatacttacact---------t-aaaaaaaattgttacctgaaattcaaatgtaactggatgccctgtgttttatctggtaatcccaGTCTTGGAAGGAAAAGGATC-AAATACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCCAAAGGTGGCGCTCTTGGAGTCTGACCTCCCCTGGCACAGGGTTTGAGATGGTCTTTACCCAGCTCCACTGGCCCAAAAGTAGCCCATAGA-CCCAAAAGAGGCCTAGCACC------TCTCCCCAGGATGTCAGGATGGGGCCCCAGGTCCCCAGCTGGTTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGGAGTCAAGAGCCTCGGTTGCAGCTCCCGCTGTGCCGCCCACGaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtctctagacccctcccagcctccatgtcctcacctcagaaaacagggt----cacaatacctgccttgccaacgtggtgaggaccagcggagaaggtgaaaggg------cttatattccaaagcccacaagg------taagcATCCCT-CCCCATGGAGTCCTCTCCCGGGCCCCTGGAAAGCACGCATAGTCGATCTGACTATAGTGAGGAGTGCGGGCTGCACCCCAAGGCAGTGTAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCCGGTGCGGCCCAGCTGCACACACAAATCTCACTTTTGCAGGAACTGTTCGTCTGCCTTCATAATACAGTTTGTTCTCCCCACTTCAA-GCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCTACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAGCCCG-------ATTTCCCCTGGCACATTTTCCG----ATCCAGGAGCCCCGGGGTGTCCTTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCTC---------------GGGTCC------------------------------AGGGGGGTCTTCTCAAATACAGCAAATCCCGGCCCAG-CCCCTCGGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgagttggagaatctgctctct---------gccctgtgaccctggccaagtctctcagctccaagcctgcatttccgcacctgtaaggtggagctaaCGGGAC-------------ACGTGCAGCGCAGACCAGGCCATGGTGAGCACGGGCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2389427 1263 - 202140232 ctttttagcatgggtatttctcatgcaatattggctacatacttacact---------taaaaaaaaattgttacctgaaattcaaatgtaactggatgccctgtgtttcatttggtaatcccaGCCTTGGAAGGAAAAGGATC-AAATACAAACCCCCTAA-TTCTCTGAGCCTTCTTTGTCCAGCCCACACAGCTGGAAGCCCGAAGGTGGTGCTCTTGGAGTCTGACCTCCCCTGGCACACGGTTTGAGATGGTCTTTACCGGGCTCCACTGGCCCAAAAGTAGCCCATAGA-CCCAAAAGAGGCCTAGCACC------TCTCCCCAGGGTGTCAAGATGGGGCCCCAGGTCCCTGGCTGGTTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGGAGTCAAGAGCCTTGGTTGCAGCTCCCGCTGTGCCGCCCACTaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtctctagacccctcccagcctccatgtccttacctgagaaaacagggt----tacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaaggg------cttatattccaaagcccacaagg------taagcATCCCT-CCCCCTGGAGTCCTCTCCCGAGCCACTGGAAGGCACGCACAGTCGATTTGACTGTAGTGAGGAGTGCGGGCTGCACCCCCAGGCAGTGTAGGCGAGTCCCGGGCACCCACTCTCATCCCTGGTCTGGTGCGGCCCAGCTGCACACACAAATCTCACTTTTGCAGGAACTGTTCATCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCGGCTTGTCCGGTAGCCCCGGGGTGTCCTTTCTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTCTC---------------GGGTCC------------------------------AGGGGGGTCTTCTCAAATACAGCAAAGCCCGACCCAG-TCCCTCGGTAGCTCTGGAACACTGCGGCTCTCCTGGTACAATCTTCAaat----ctggtggagaggaaagcgtgtggacttgggaccctgaggtggagaatctgctctct---------gccctgtgaccctggccaagtctctcagctccaagcctgcatttccgcacctgcaaagtggagCTCACGGGAC-------------ACGTGCAGCGCAAACCAGGCCATGGTGAGCACAGGCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2947132 1262 - 123690457 ctttttagcatgagtatttctcatgcaatattggctacatacttacact---------taaaaagaaattgttacctgaaattcaaatgtaactggatgccctgtattttatctggtaatcccaGTCTTGGAAGGAAAAGGATC-AAATACGAACCCCCTAA-TTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTGGAAGCCCGAAGGTGGAGCTCTTGGAGTCTGACCTCTCCTGGCACACGGTTTGAGATGGTCTTTACCCGGCTCCACTGGTCCAAAAGTAGCCCATAGA-TCCAAAAGAGGCCTAGCACC------TCTCCCCAGGGCGTCAGGATGGGGCCCCAGGTCCCCGGCTGCTTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGGAGTCAAGAGCCTCGGCTGCAGCTCCTGCTGTGCCGCCCACTaccggctctggggtcagatgatctgctggttcaaatcctgactcggcctcctactagccaggccagtatccagacccctcccagcctccacgtcctcacctgagaaaacagggt----cacaatagctgccttgccaaggtggtgagga-cagtggagaaggtgaaaggg------cttaTATTCCAAAGCCCACAAGG------TGAGCATCCCTCCCCCATGGAGTCCTCTCCCGGGCCACTGGAAAGCACACACAGTGGATTTGACCATAGTGAGGAGTGCGGGCTGCACCCCCAGGCAGTGTCGGCGAGTCCTGGGCGCCTGCTCTCATCGCTGCTCCGGTGCGGCCCAGCTGCACACACAAATCTCACTTTTGTAGGAACTGTTTGTCTGCCTTCATAATACAGTTTCTGCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCGGCTTGTCCAGGAGCCCCGGGGTGTCCTTTCTGCTGTGAAACCTCCTCGTGCTCCCCAAGCCCACAGTCTCTC---------------GGGTCC------------------------------AGGGGGGTCTCCTCAAATATGGCAAAGCCCGGCCCAG-CCCCTCGGTGGCTCCGGAACACTGCGGCTCTCCTGGTACAGTCTTCAAAT----Ctggtggagaggaaagcgtgtggacttgggaccctgagctggagaatctgctctcc---------gccctgtgaccctggccaagtctctcagctccaagcctgca-ttctgcacctgtaaggtggagCTCACGGGAC-------------ACGTGCAGCGTAAACCAGGCCACGGTGAGCACAGGCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 107013 1238 - 111706 ctttttagca----tatttctcatgcaatattggctacatacttacactaa-aaaaaaaaaaaaaaaattgttacctgaaattcaaatgtaactggatgccctgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATC-AAATACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCCAAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAGGCCTAGAACC------TCTCCCCAGGGCATCAGGACGGGGCCCCAGGTCCCC-GCTGGCTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGC--------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGctggctctggggccgga--------------------tgactcggcctcctactagcccggccagtctctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttatattccaaagcccacaagg------taagcATCCCTCCCCCATGGAGTCCTCTCCCCGGCCACCTGAAAGCACGCACAGTCGATGTGACTATAGTGAGGAGTACGGGCTGCACCCCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCAGCCCAGCTGCACACACAAATCTCAC-TTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCAGCTTCTCCAGGAGCCCCGGGGTGTCAGTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTTT---------------GGGTCC-------------------------------GGAGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAG-CCCCTCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtggactggggaccctgagttggagaacctgctctct---------gccctgtgaccctggccaagtctctcagctccaagcctgcatttctgcatccgtaaggtggagctaaCGGGAC-------------ATGTGC-----ACACCAGGCCACGGTGAGCACAGGCAG i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192420499 1239 - 192460366 ctttttagca----tatttctcatgcaatattggctacatacttacactaacaacaacaacaaaaaaattgttacctgaaattcaaatgtaactggatgccctgtgttttatgtagtaatcccaGTCGTGGAAGGAAAAGGATC-AAATACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCCAAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAGGCCTAGAACC------TCTCCCCAGGGCATCAGGACGGGGCCTCAGGTCCCC-GCTGGCTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGC--------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGctggctctggggccgga--------------------tgactcggcctcctactagcccggccagtctctagacccctcccagcctccatgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttatattccaaagcccacaagg------taagcATCCCTCCCCCATGGAGTCCTCTCCCCGGCCACCTGAAAGCACGCACAGTCGATGTGACTATAGTGAGGAGTATGGGCTGCACCCCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCATTGCAGCCCAGCTGCACACACAAATCTCAC-TTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCAGCTTCTCCAGGAGCCCCGGGGTGTCAGTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTTT---------------GGGTCC-------------------------------GGAGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAG-CCCCTCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCcaat----ctggtggagaggaaagcaggtggactggggaccctgagttggagaacctgctctct---------gccctgtgaccctggccaagtctctcagctccaagcctgcatttctgcatccgtaaggtggagctaaCGGGAC-------------ATGTGC-----ACACCAGGCCACGGTGAGCACAGGCAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187341758 1216 + 187378091 CTTTTTAGCA----TATTTCTCATGCAATATTGGCtacatacttacact---aaaaaaaaaaaaaaaattcttacctgaaattcaaatgtaactggatGCCCTGTGTTTTATGTAGTAATCCCAGTCGTGGAAGGAAAAGGATC-AAATACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGAAGCCCAAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATAGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAGACCTAGAACC------TCTCCCCAGGGCATCAGGATGGGGCCCCAGGTCCCC-GCTGGTTGTCCTGTGGACTT-------CAGGGAATGA----CGAGGCAGC--------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGCTGGCTCTGGGGCCGGA--------------------TGACTCGGCCTCCTACTAGCCCGGCCAGTCTCTAGACCCCTCCCAGCCTCCATGTCCTCACCTGAGAAAACAGGGT----CACAATACCTGCCTTGCCAAGGTGGTGAGGACCAGTggagaaggtgaaagggaaaaCCCTTATATTCCAAAGCCCACAA--------------------------GGAGTCCTCTCCCCGGCCACCTGAAAGCACACACAGTCAATGTGACTCTAGTGAGGAGTACGGGCTGCACCCCCAGGCAGCG--GGCGAGTCCTGGGCACCCGCTGCCACCACTGGTCCACTGCAGCCCAGCTGCACACACAAATCTCAC-TTTGCAGGAACTGTTCATCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTGGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCAGCTTTTCCAGGAGCCCCGGGGTGTCACTTTTGCTGTGAAACCTCCTCATGCTCCCCAAGCCCACAGCCTTTT---------------GGGTCC-------------------------------GGGGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAG-CCCCTCGGGAGCTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCCAGT----CTGGTGGAGAGGAAAGCAGGTGGACTGGGGACCCTGAGTTGCAGAACCTGCTCTCT---------GCCCTGTGACCCTGGCCAAGTCTCTCAGCTCCAAGCCTGCATTTCTGCATCTGTAAGGTGGAGCTAACGGGAC-------------ATGTGC-----ACACCAGGCCACGGTGAGCACAGGCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91366816 1230 + 91754291 ctttttagca----tatttctcatgcaatattggttacatacttacact----aaaaaaaaaaaaaaattgttacctgaaattcaaatgtaactggattccctgtgttttacgtagtaatcccaGTCGTGGAAGGAAAAGGATC-AAATACAAACCCCCTCATTTCTCTGAGCCTTCTTGGTCCAGCCCACACAGCTAGGAGCACAAAGGTGGCACTCTTGGAGTCTGACCTCCCCTGGCACATGGTTTGAGATGGTCTTTACCCAGCTCCACTGGTCCAAAAGTAGCCCATAGACCCCCAAAGAGGCCTAGAACC------TCTCCCCAGGGCGTCAGGATGGGGCCCCAGGTCCCC-GCTGGTTGTCCTGTGGACCT-------CAGGGAATGA----CGAGGCAGG--------TCCTTGGTTGCAGCTGCCGCTGTGCTGCCCACTGCTGGCTCTGGGGCCGGA--------------------tgactcggcctcctactagcccggccagtctctagacccctcccagcctccgtgtcctcacctgagaaaacagggt----cacaatacctgccttgccaaggtggtgaggaccagcggagaaggtgaaagggaaaacccttATATTCCAAAGCCCACAAGG------TAAGCATCCCTCCGCCATGGAGTCCTCTCCCCAGCCACCTGAAAGCACGCACAGTCGATGTGACTATAGTGAGGAGTACGGGCTGCACCCCCAGGCAGTGT-GACGAGTCCTGGGCACCCGCTGTCACCACTGGTCCCGTGCAGCCCAGCTGCACACACAAATCTCAC-TTTGCAGGAACTGTTCCTCTGCCTTCATAATACAGTTTCTTCTCCCCACTTCAAGGCCTGAGATCATTTCTCTGAGCCTTCTTGGTC-------------------------------CAGCCCACACAGCTAGAAGCCC--AGAGTGGTGCCCTTGGAGCCTG-------ACTTCCCCTGGCACATTTTCCAGCTTTTCCAGGAGCCCTGGGGTGTCATTTTTGCTGTGAAACCTCCTCCTGCTCCCCAAGCCCACAGCCTTTT---------------GGGTCC-------------------------------AGGGGGTCTTCTCAAATACAGCAAAGCCCGGCCCAG-CCCCTCAGTAGTTCTGGAACACTGCGGCTCTCCTGGTACCATCTTCCAAt----ctggtggagaggaaagcaggtggactggggaccctgagctggagaacctgctctct---------gtcctgtgaccctggccaagtctctcagctccacgcctgcatttctgcatctgtaaggtggagctaacgGGAC-------------GTGTGC-----ACACCA------GGTGAGCACAGGCAG i chlSab2.chr15 C 0 C 0 s canFam3.chr33 2328195 1208 - 31377067 -------------ctctctgtcatg-aata----------------aat---------aaataaaatattttta---aaaaTTCAAATGTAAGTGGATGTCCCAGGTTTTATCCAGGAACCTTCCTCTTGGAAGGAAAAGAATCAAAATATAAACCCTC--------------------------------------------------------CTTTTGGGGTTCCA-------------ATGGTTTGAGATGGTCGTTACTGAGGTCTACTGGCCCCAAAGTA-CCCAAGGA-CCCAACGGAAGTACGAGACCATGTGGTCACCTCTACCTGTCA-----GGGCCCCAGGTCCTCAGTTTGTCCTCCCATGTCTCTCCCTGAgcagtgaaagagcactggaccaggaagcgaaagactgggctccggccctaggcctgttgccaacta---gctctgGAGTCCAATGA----CTGGCTCAAATCCTGACTCCGCGTCCTACCGGCCAGG------------CCCCTCCGGGCCGC----------CCTCGTGAACCAGGGTTACCTACCAGACCTGCCTTGCC---GTGGTGAGGGCCTGAGGGGAAGGGGAACGGGAAAGT-CTTATATTCCAAAGCCTGCAAGGGGCCACTAAGCACCCCTCCCCAGCCGTGTCCTCTCAAAGAGGCATTGACAGCACACA--------------ACCTTCAGAAGGTCAGGCTGGCCCCACATGCGTATCAGGTGAGTCACGG-------CCTTCACCCTC------------CTCAGCTG--TTCACGAATCGTGCTTCTACGGG--------------------AATATACTTCCTTCTCCCCACTTCAAAGCCCAAG-CCATTTCTCTGAGCTTCCTCAATCCCCACCCGGTGGAATCAAAGCCTTTCTGTGTCAGCCCACACAAGCTAAGGCCCCAACAGAGGTATTCTTGGGGTCTGACCACCCACCTCCCCTGAAGTATTTTCTTCTTTATCCGGGAACCCCACAATATCATCCTT-CTGTGAAACCTCCTCATGCCTCCC-AGCCCCTAACCTCTTCACCCCCCCACCCTGGGGTCTCACAGCCCCCCCACCCAAGTCTCCTACCCAGCAGGGGTCTTCTCAGACGCAGCAAAGCCC-ACGCAG-CCCGC--ACAACTCTAGAATGTGGCAGCTCTCCTGGTCTATTCCTCAAATCACACtggcagagaggaaggtgcgtgttctttggggcctgagtctgaatccctgctctcctgctttccaaccatgtcaccctggccaggtctcctggctcccagcctgcactttctcatctgtaaaatggagctaagggcacctgtttcacagggatgtgaagagtaaatcaatccaagtgtaaaacgtgcag i canFam3.chr33 I 219 I 5697 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850478 386 + 74750902 T a score=638188.000000 s hg38.chr3_KI270937v1_alt 72076 297 + 165607 GAGGCCACGGGGTGCAGTGCTCAGGCCTGTGAGGAGTCAGATTCTGGCTCCGAGGAGTTGTTACTGGATGCCCAGAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTGGGGGGtggtaagaacagggccgatcttgcagggccgttgtgaggattaaaaatacaatgtatgataatgatgcatcaaagtaggttcctcagtcctatcaaatgtgccactctggtgggggacgctgatgatgggggaggctgtgagtggtggggatgggaactccagactctccactgcagcttt s panTro4.chr3_GL389630_random 49080 294 - 103936 GAGGCCATGGGGTGCAGTGCTCAGGCCTGTGGAGAGTCAGATCCTGGCTCCGAGGAGTTGTTACTAGATGCCCAGAAGCACAGTGGCCTCACCCTTAAAGCAGTGGAGGTGGTGGGtggtaagaacagggccgatcttgcagggccgttgtgagaattaaaAATACAAtgtatgataatgatgggtcaaagtaggttcctcagtcctaacaaatgtgccactctggtgggggatgctgatgatgggggaggctgtgagtggtggggatgggaactccagactctccactgcagc--- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2390690 295 - 202140232 GAGGCCGCGGGGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGTTGTTACTGGATCCCCAGAAGCACAGTGGCCCCGTCCTTAAAGCAGTGGAGGTGGGGGGTGGTAAGAACAGGGCCGATCTTGTGGGGTCATCGTGAGGATTAAAAATATAATGTAtgataatgatgtgtcaaagtagattcctcagtcctaacaaatgtgccactctggt-ggggacgttgatgatgggggaggctgtgagtggtggggatgggaattccatactcttcactccagt-tt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2948394 294 - 123690457 GAGGCCGCGGAGTGCAGTTCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCC--GGAGTTCTTACTGGATCCCCAGAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTGGGGGGTGGTAAGAACAGGGCGGATCTTGGAGGGCCATTGTGAGGGTTAAAAATATAAtgtatgataatgctgtgtcaaagtagattcctcggtcctaacaaatgtgccactctggtgggggacgtcgatgatgggggaggctgtgagtggtggggatgggaactccatactctccactccagt-tt i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 108251 294 - 111706 GAGGCTGAGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGagtcactggatccccagaagcacagtggcctcatccttaaagcagtgga-gtccggggtggtcagagcaggg-tcatcttgtagggccattgtgagggttaaaaatataatgtatgataatgatgcatcaaagtaggttcctcagtcctaacaaacgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaagt-tt i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192421738 294 - 192460366 GAGGCCGAGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGAGTCACTGGGTCCCCAGAAGCACAGTGGCCTCATCCTTAAAGCGGTGGA-GTCGGGGGTGGTCAGAACAGGG-TCAACTTGTAGGGCCATTGTGAGGGTTAAAAATATAATGTAtgataatgatgcatcaaagtaggttcctcagtcctaacaaacgtgccactctggtgggggatgttgatgatgggggaggctgtaagtggtggggatgggaactcgatactctctgctcaaGt-tt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187342974 296 + 187378091 GAGGCCGCGGCGTGCAGTGCTCAGGCCTGTGTGGAGTCAGATCCTGGCTCCGAGGAGGAGTCACTGGATCCCCAGAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTCGGGGGTGGTAAGAACAGGGCCCATCTTGTAGGGCCATTGTGAgggttaaaaatataatgtatgaTAATGATGCATCAAAGTAGGTTCCTCAATCCTAACAAACgtgccactctggtgggggatgtcgATGATGGGGGAGGCTGTAAGTGGTGGGGATGGGAACTCGATACTctctgctcaatt-tt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368046 290 + 91754291 GAGGCCGCGGCGTGCAGCGCTCAGGCCTGTGTGGAGTCAGAGCCTGGCTCCGAGGAGTCGTCACTGGATCCCCAGAAGCACAGTGGCCTCATCCTTAAAGCAGTGGAGGTCGGGGGTGGTCAGAACAGGG-TCATCTTGTAGGGCCATTGTGAGGGTTAAAAATAC--TATACgataatgatgcatcaaagtaggttcctcagtcctaacagacgtgctgctctggtgggggatgtc---gatggcagaggctgtacgtggtggggatgggaactcgatactctccgctcaagt-tt i chlSab2.chr15 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850478 386 + 74750902 T e canFam3.chr33 2329403 5697 - 31377067 I a score=608749.000000 s hg38.chr3_KI270937v1_alt 72373 227 + 165607 t-------------ttttttttttgaaacacagtttcacttttgttgccca--------ggccagagcgcaacggtgcgatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacctgctaccacccccggctaa-ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctc s panTro4.chr3_GL389630_random 49374 225 - 103936 ---------------tttttttttgaaacatagtttcactcttgttgccca--------ggccagagtgcaatggtgcgatctcagctcactgcaaactccacctcccaggttcaagcaattctcctgcctcagcctcccgagtaggtgggattacaggcacctgctaccacccccggctaa-ttttatatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcctgacctc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2390985 227 - 202140232 t-------------ttttttttttgaaacagagtttcacttttgttgccca--------ggctgcagtgcagtggtgcaatgtcagctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacctgctaccacacctggctaa-ttttgtatttttagtagagatggggtttctccatgttggtcaggctagtctcgaactcccaacctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2948688 227 - 123690457 c-------------ttttttttttgaaacagagtttcacttttgttgccca--------ggccagagtgcaatggcaagatctcagctcactgcaacccccacctcccaggttcaagcaattctcttgcgtcagcctcccaagtagctgggattacaggcacctgctaccacacccggctaa-ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctccaactcccgacctc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 108545 237 - 111706 tttgtttttttgtttttttttttttaaaa--agtttcactc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcgctgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcaaactcctgacctc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192422032 235 - 192460366 tttgtttttttg--tttttttttttaaac--agtttcactc-tgttgccca--------ggctggagtgcagtggcgtgatcttggctcgctccaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagggacggggtttctccatgttggtcaggctggtctcaaactcctgacctc i macFas5.chr2 C 0 I 1239 s papAnu2.chr2 187343270 223 + 187378091 --------------tttttttttttaaac--agtttcactc-tgttgccca--------ggctagagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcctgcctcagcctcctgagtagctgggattacaggcagctgctaCCACatcccgctaa-ttttgtatttttagtagggacggggtttctccatgttggtcaggctggtctcaaactcctgacctc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368336 233 + 91754291 tt------------tttttttttttaaac--agtttcactc-tgttgcccagtgcagtgggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcccaggttcaagcaattctcctacctcagcctcctgagtagctgggattacaggcagctgctaccacatcccgctaa-ttttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcaaactcctgacctc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850092 228 + 74750902 -------------tttatttttttgagatgaagtttcattctttttgagca--------ggctggagtgcagtgacgcaatcacggctcaccgcaacctccacctcctgggttcaggtgattctcccgcctcagcctcccaagtagctggcattacaggcacgcgccaccatggccggctaatttttgcatttttagtacagatggggtttcaccgggttggtcaggctggtctcgaattccagacctc i calJac3.chr17 T 386 C 0 e mm10.chr16 32795241 1607 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I a score=146912.000000 s hg38.chr3_KI270937v1_alt 72600 66 + 165607 aggtgatccacccacctcagcctcccaaaatgctgggattacaggtgtgagccaccacgcccggcc s panTro4.chr3_GL389630_random 49599 66 - 103936 aggtgatccgcccacctcggcctcccaaaatgctgggattacaggtgtgagccaccgtgcccggcc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391212 66 - 202140232 aggtgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccacacccaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2948915 66 - 123690457 aggtgatccgcccgcctcagcctcccaaaatgctgggattacaggtgtgagccactgcacccagcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 108782 66 - 111706 aggtgatctgcccgccttggcctcccaaaatgctgggattacaggtgtgagccactgcacccggcc i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187343493 66 + 187378091 aggtgatccgcccgccttggcctcccaaaatgctgggattacaggtgtgagccactgcacccggcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368569 66 + 91754291 aggtgatccacccgccttggcctcccaaaatgctgggattacaggtgtgagccactgcacctggcc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850320 66 + 74750902 aggtgatccacatgccccggcctctaaaagtgctgggattacaagcgttagcctctgcccctgacc i calJac3.chr17 C 0 I 106 e mm10.chr16 32795241 1607 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e macFas5.chr2 192422267 1239 - 192460366 I a score=67492.000000 s hg38.chr3_KI270937v1_alt 72666 39 + 165607 tctccactcgaggtttagagggagcatagaactgctcta s panTro4.chr3_GL389630_random 49665 39 - 103936 tctccactcgaggtttagagcgagcatagaactgctcta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391278 39 - 202140232 tctccactggaggtttagagcgaacctagaactgctcta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2948981 39 - 123690457 tctccactcgaggtttagagtgaacctagaactgctcta i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 108848 38 - 111706 -ctccactcaaggtttagagcaaacctagaactgctcta i rheMac3.chrUn_JH291127 C 0 C 0 s papAnu2.chr2 187343559 39 + 187378091 tctccaCTCAAGGTTTAGAGCAAACCTAGAActgctcta i papAnu2.chr2 C 0 I 27 s chlSab2.chr15 91368635 39 + 91754291 tctccactcaaggtttagagcaaacctagaactgctcta i chlSab2.chr15 C 0 I 22 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850386 106 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e macFas5.chr2 192422267 1239 - 192460366 I a score=-1728.000000 s hg38.chr3_KI270937v1_alt 72705 8 + 165607 aaaaaa----------aa s panTro4.chr3_GL389630_random 49704 13 - 103936 aaaaaaaaaat-----AA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391317 18 - 202140232 aaaaaataaaTAAATAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2949020 13 - 123690457 aacaaataaaT-----AA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 108886 7 - 111706 ---aaataaa-------- i rheMac3.chrUn_JH291127 C 0 I 315 s macFas5.chr2 192423506 8 - 192460366 --aaaataaa-------- i macFas5.chr2 I 1239 C 0 s papAnu2.chr2 187343625 8 + 187378091 --aaaataaa-------- i papAnu2.chr2 I 27 I 5 s chlSab2.chr15 91368696 8 + 91754291 --aaaataaa-------- i chlSab2.chr15 I 22 C 0 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850386 106 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I a score=13171.000000 s hg38.chr3_KI270937v1_alt 72713 8 + 165607 ataaatcc s panTro4.chr3_GL389630_random 49717 8 - 103936 ATAAATCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391335 8 - 202140232 ATAAATCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2949033 8 - 123690457 ATAAATCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192423514 8 - 192460366 aCAAATCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343638 8 + 187378091 acaaatcc i papAnu2.chr2 I 5 C 0 s chlSab2.chr15 91368704 8 + 91754291 ataaaTCC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32795241 1607 + 98207768 I e calJac3.chr17 73850386 106 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e rheMac3.chrUn_JH291127 108893 315 - 111706 I a score=-3289.000000 s hg38.chr3_KI270937v1_alt 72721 7 + 165607 ttttcta s panTro4.chr3_GL389630_random 49725 7 - 103936 TTTTCTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391343 7 - 202140232 TTTTTTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2949041 7 - 123690457 TTTTTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192423522 6 - 192460366 CCCCCT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343646 5 + 187378091 ccccc-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368712 4 + 91754291 CCCC--- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32796848 7 + 98207768 ttatcta i mm10.chr16 I 1607 C 0 e calJac3.chr17 73850386 106 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e rheMac3.chrUn_JH291127 108893 315 - 111706 I a score=11593.000000 s hg38.chr3_KI270937v1_alt 72728 6 + 165607 tttttt-- s panTro4.chr3_GL389630_random 49732 6 - 103936 TTTTTT-- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391350 6 - 202140232 TTTTTT-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2949048 6 - 123690457 GTTTTT-- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 109208 6 - 111706 TTTTTT-- i rheMac3.chrUn_JH291127 I 315 C 0 s macFas5.chr2 192423528 5 - 192460366 -TTTTT-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343651 6 + 187378091 TTTTTT-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368716 6 + 91754291 TTTTTT-- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32796855 6 + 98207768 --ttTTAA i mm10.chr16 C 0 C 0 e calJac3.chr17 73850386 106 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I a score=306769.000000 s hg38.chr3_KI270937v1_alt 72734 93 + 165607 aaTGTATGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCATTCCCGTCTTTCACAAAAGCCCTGC--CTGTCAGCATCCACCC s panTro4.chr3_GL389630_random 49738 93 - 103936 AATGTATGTGATGAGTTTGGCACAACTCCTATTAGCGACAGGTCAGGGTTCATTCCCGTCTTTCACAAAAGCCCTGC--CTGTCAGCATCCACCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391356 93 - 202140232 AATGTATGTGATGAGTTTGGCACAACTCCTGTTGGCGACAGGTCAGTGTTCATTCCCATGTTTCACAAAAGCCCTGC--CTCTCAGTATCCACCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2949054 93 - 123690457 AATGTATGTGATGAGTTTGGCACAACTCCTATTAACGACAGGTCAGGGTTCGTTCCCGTCTTTCACAAAAGCCCTGC--CTCTCAGCATCCACTC i nomLeu3.chr11 C 0 T 90437 s rheMac3.chrUn_JH291127 109214 93 - 111706 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCATCTTTCACAAAAGCCCTGC--CTCTCAGCATCCACCC i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192423533 93 - 192460366 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCATCTTTCACAAAAGCCCTGC--CTCTCAGCATCCACCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343657 93 + 187378091 AATGTATGTGATGAGTTTGGCACAGCTCCTATTAACGACAGGTCAGGGTTCCTTCCCGTCTTTCACAAAAGCCCTGC--CTCTCAGCATCCACCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368722 93 + 91754291 AACGTATGTGATGAGTTTGGCACAGCTCCTATTAGCGACAGGTCAGGGTTCGTTCCCGTCTTTCACAAAAGCCCTGC--CTCTCAGCATCCACCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850492 90 + 74750902 AATGTATGTGATTAGTTTGACACAA---GTATCAGTCACAGATCAGTGTTAGTTCCCGTCTTTCTCAGAAGCCCTGC--CTCTCAGCATTCACCC i calJac3.chr17 I 106 C 0 s mm10.chr16 32796861 93 + 98207768 AGTGTGTGTGATAGGTTTGGCACAGTGCCAGTTAGTAACAGATCACGGTTAGCTCCCATCTTTCAGAAAAG-TCTGCCTCTCTCAGAATCTCCC- i mm10.chr16 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I a score=20997.000000 s hg38.chr3_KI270937v1_alt 72827 6 + 165607 TTCCCA s panTro4.chr3_GL389630_random 49831 6 - 103936 TTCCCA i panTro4.chr3_GL389630_random C 0 I 1113 s ponAbe2.chr3 2391449 6 - 202140232 TTCCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2858710 6 - 123690457 TTCCCA i nomLeu3.chr11 T 90437 C 0 s rheMac3.chrUn_JH291127 109307 6 - 111706 TTCCCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192423626 6 - 192460366 TTCCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343750 6 + 187378091 TTCCCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368815 6 + 91754291 TTCCCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850582 6 + 74750902 TTCCCC i calJac3.chr17 C 0 C 0 s mm10.chr16 32796954 6 + 98207768 CGCCCA i mm10.chr16 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I a score=662340.000000 s hg38.chr3_KI270937v1_alt 72833 277 + 165607 AGCAGTTTGTGGCAGTTGGACTTTTCACACGAAATCTGTATTTTGAAGGAAATCCATGCTAGGTAATAAACTGGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACCTCCCTGCACCCCCGCTCCGTGCCCCACTTACTGTCCCACGTTCATAAACAGAAACTCTCAGCCACCCCTTACGATGGCAGCGTCATGTTTGATTAGTGTGTACTGCAGCGCCAGGCACGCTTACACTCACACACATCG s panTro4.chr3_GL389630_random 50950 277 - 103936 AGCAGTTTGTGGCAGTTGGACTTTTCACACGAAATCTGTATTTTGAAGGAAATCCATGCTAGGTAATAAACTGGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACCTCCCTGCACCCCCGCTCCGTGCTCCACTTACTGTCCCACGTTCATAAAGACAAACTCTCAGCCACCCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAGGCACGCTTACACTCACACACACCG i panTro4.chr3_GL389630_random I 1113 C 0 s ponAbe2.chr3 2391455 277 - 202140232 AGCAGTTTGTGGCAATTGGACTTTTCACACAAAATCTGTATTTTAAAGGAAATCCATGCTAGGTAATAAACTTGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACCTCCCTGCACCCCCGCTCCATGCCCCACTTACTCTCCCACATTCATAAAGACAAACTCTCAGCCACCCCTTATGATGGCAGCGTCATGGTTGATTAGTGTATACTGCGGTGCCAGGCACACTTACACTCACACACACCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2858716 277 - 123690457 AGCAGTTTGTGGCAGTTGGACTTTTCACACGAAATCTGTATTTTGAAGGAAATCCATGCTAGGTAATACACTTGGAGGAGTCAGAATCTTGTTAAGCCACATTCTTCAGCTTTCTGCACAATGATCACCAGCTGGCACCTCCCTGCACCCCGGCTCTGTGCCCCACTTACTCTCCCACGTTCATAAGGACAAACTCTCAGCCACCCCTTACGATGGCAGCGTCATGGTTGATTAGTGTGTACTGCAGCGCCAGGCACCCTTACGCTCACACACACCG i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 109313 238 - 111706 AGCAGTTTGTGGTAGTCGGACTTTTCACTCGGAATCTGTATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACCTCCCTGCACCCAC-CTCCCCACCCCACTCACTCT-CCACGTTCATAAAGGCAGACTCTCAGCCACCTCTCACCATGGCAGC----------------------------GCCAGGCAGGCTTACACTCA--------- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192423632 238 - 192460366 AGCAGTTTGTGGTAGTCGGACTTTTCACTCGGAATCTGTATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATTGCCAGCTGGCACCTCCCTGCACCCAC-CTCCCCACCCCACTCACTCT-CCACGTTCATAAAGGCAGACTCTCAGCCACCTCTCACCATGGCAGC----------------------------GCCAGGCAGGCTTACACTCA--------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343756 238 + 187378091 AGCAGTTTGTGGTAGTCGGACTTTTCACTCGGAATCTGTATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCGAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACCTCCCTGcacccac-ctccctgccccactCACTCT-ACACGTTCTTAAAGGCAGACTCTCAGCCACCTCTCACCATGGCAGC----------------------------GCCAGGCAGGCTTACACTCA--------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91368821 238 + 91754291 AGAAGTTTGTGGTAGTCGGACTTTTCACTCGGAATCTGTATTTTGAAGGAAATCCATGCCAGGTAATAAACTTGGAGGAGTCCAAATCTTGTTGAGCCACATTCTTCAGCTTTCTGCACAATGATCGCCAGCTGGCACCTCCCTGCACCCAC-CTCCCCGCCCCACTCACTCT-CCACGTTCATAAAGGCAGACTCTCAGCCACCTCTCACCATGGCAGC----------------------------GCCAGGCAGGCTTACACTGA--------- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850588 252 + 74750902 AGCAGTCTGTGACAGTCGACCTTTTCGCACGAAATCTGTATTTTGAAGGAGATCCATGCCAGGTAATAAACTTCGAGGAGTTAGAATGTTGTTAAGCCGCATTCTTCAGCTGTCTGCAAAATGATGACCAGCCGGCCCCTCCCTGCACCCCGCTTCCTCGC-------------CCACATTC-TAA-----------CAGCAACCCCGTGCAATGGCAGCGTCACGGTTTATTTGTGTGTGCTGCGGCGCCATGCACGCTTACACTGATACAAACCA i calJac3.chr17 C 0 T 56 s mm10.chr16 32796960 211 + 98207768 AGCAGTTTGTGACA----AACTTTTCATTCAAAAGGCAAATTTCAAAGAACAGCTGGGCTAGGTAACGATGTTGGAGGGAGCAGAGC-----------------------------TAAAATGATCACCAGCTGGCATCTCCCAAGCCCCTC-CTCCCTCCAC--CCCACTATCCCATGAC--TAAAGAGTGACTCCCAGAC-TCCCTTACAGTGATGGC----------------------CACAGGGCCAC-CATGTGTAAGCTGACCCAT---- i mm10.chr16 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I a score=14810.000000 s hg38.chr3_KI270937v1_alt 73110 18 + 165607 TCATGGTTGATTAGTGTG s panTro4.chr3_GL389630_random 51227 18 - 103936 TCATGGTTGATTAGTGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391732 18 - 202140232 TCATGGTTGATTAGTGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2858993 18 - 123690457 TCATGGTTGATTAGTGTG i nomLeu3.chr11 C 0 I 112 s calJac3.chr17 73850784 18 + 74750902 TCACGGTTTATTTGTGTG i calJac3.chr17 T 56 C 0 e mm10.chr16 32797171 0 + 98207768 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369059 0 + 91754291 C e papAnu2.chr2 187343994 0 + 187378091 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac3.chrUn_JH291127 109551 0 - 111706 C a score=16022.000000 s hg38.chr3_KI270937v1_alt 73128 19 + 165607 TACTGCAGCGCCATGCACG s panTro4.chr3_GL389630_random 51245 19 - 103936 TACTGCAGTGCCATGCACG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391750 19 - 202140232 TACTGCAGCGCCATGCACA i ponAbe2.chr3 C 0 I 168 s nomLeu3.chr11 2859123 19 - 123690457 TACTGCAGCGCCAGGCACG i nomLeu3.chr11 I 112 C 0 s calJac3.chr17 73850802 19 + 74750902 TGCTGCGGCGCCATGCACG i calJac3.chr17 C 0 C 0 s mm10.chr16 32797171 15 + 98207768 --CTGCCA-GCCA-GCACA i mm10.chr16 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369059 0 + 91754291 C e papAnu2.chr2 187343994 0 + 187378091 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac3.chrUn_JH291127 109551 0 - 111706 C a score=5170.000000 s hg38.chr3_KI270937v1_alt 73147 8 + 165607 CTTACACT s panTro4.chr3_GL389630_random 51264 8 - 103936 CTTACACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391937 8 - 202140232 CTTACACT i ponAbe2.chr3 I 168 C 0 s nomLeu3.chr11 2859142 8 - 123690457 CTTACACT i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73850821 8 + 74750902 CTTACACT i calJac3.chr17 C 0 I 11 s mm10.chr16 32797186 6 + 98207768 CTCGTC-- i mm10.chr16 C 0 C 0 e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369059 0 + 91754291 C e papAnu2.chr2 187343994 0 + 187378091 C e macFas5.chr2 192423870 0 - 192460366 C e rheMac3.chrUn_JH291127 109551 0 - 111706 C a score=11186.000000 s hg38.chr3_KI270937v1_alt 73155 10 + 165607 CACTCACACT---- s panTro4.chr3_GL389630_random 51272 10 - 103936 CACTCACACC---- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391945 10 - 202140232 CACTCACACC---- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2859150 10 - 123690457 CACACACACC---- i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 109551 6 - 111706 ----CACACC---- i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192423870 6 - 192460366 ----CACACC---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187343994 6 + 187378091 ----CACACC---- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91369059 6 + 91754291 ----CACACC---- i chlSab2.chr15 C 0 C 0 s mm10.chr16 32797192 10 + 98207768 ----TATTCCTCCG i mm10.chr16 C 0 C 0 e calJac3.chr17 73850829 11 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I a score=1326663.000000 s hg38.chr3_KI270937v1_alt 73165 474 + 165607 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACAAGTAGCACTGTGGTTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGTGGCTCATACTGAAATTCACTCCCAGAGCCCTACTAGGGGAGAGGCCCACCAGGCCCTTCTAGGCCTCCTTACCTGCAGAGCTCCCAGAGACCCCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGACAGCCCAT----CCTAGCC--GGCCACCGCT--GCTCCACAGAACTGCTGGCTGTCTCTCGCGGGTACCTTTTCCTGCTTCCTCAAACCAG-------GGAGGGGCAGCCTCCTGCCCAGGTGTGTGACCAGGTGAT----------------------CACAAATGTGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAAGCTGA-CCCCCCTGCCTTCCTTGCCCGGTAAACACTCCACTGAAATTTGATTTGAAGATATGGAATCA s panTro4.chr3_GL389630_random 51282 476 - 103936 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACAGGTAGCACTGTGGTTCATTATAATCAACCCGAGAGAGCCTGCCCTTGCCCATGAAGGGTGGCTCATACTGAAATTCACTCCCAGAGCCCCCCTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCCTCCTTACCTGCAGAGCTCCCAGAGACCCCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCAT----CCTAGCC--GGCCACCGCT--GCTCCACAGAACTGCTGGCTGTCTCTCGCGGGTACCTTTTCCTGCTTCCTCAAACCAGGGA----GGAGGGGCAGCCTCCTGCCCAGGTGTGTGACCGGGTGAT----------------------CACAAATGTGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAAGCTGA-CCCCCCTGCCTTCCTTGCCTGGTAAACACTCCACTGAAATTTGATTTGAAGATATGGAATCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2391955 475 - 202140232 GTCATTTGCACACTCTTTATCAACAATAATAGCACTTCACAGGTAGCACTGTGGTTCATTATCATCAACCCAAGAGAGCCTGCCCTTGCCCATGAATGGGGGCTCATACTGAAATTCACTCCCAGAGCCCCACTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCCTCCTTACCTGCAGAGCTCCCAGAGACGCCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGACAGCCCAT----CCTAGCC--AGCCACCGCC--GCTCCACAGAACTGCTGGCTGTCTCTCACGGGTACCTTTTCCTGCTTCCTCAAA-CAGGGA----GGAGGGGCAGCCTCCTGCCCAGGTGTGTGACCAGGTGAT----------------------CACAAATGTGCTGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAAGCTGA-CCCCCCTGCCTTCCTTGCCCGGTAAACACTCCACTGAAATTTGATTTGAAGATATGGAATCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2859160 476 - 123690457 GTCATTTGCACACTTTTTATCATCAATAATAGCACTTCACAGGTAGCCCTGTGGTTCCTTATAATCAACCCGAGAGAGCCTGCCCTTGCCCGTGAAGGGTGGCTCATACTGAAATTCCCTCCCAGAGCCCCACTAGGGGAGAGGCCCACCAGGCCCCTCT-GGCTTCCTTACCTGCAGAGCTCCCAGGGACCCCAACCTCCCAGCAGAAGAAGAAAAGAAGCAGAGTCAGACCCCAGAGACAGCCCAT----CCTAGTT--GGCCACTGCT--GCCCCACAGAACTGCTGGCTGTCTCTCACGGGTACCTTTTCCTGCTTCCTCAAACCAGGGAGGAGGGAGGGGCAGCCTCCTGCCCAGGTGTGTGGCCAGGTGAT----------------------CACAAATGTGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAGGCTGACCCCCCCTGCCTTCCTTGCCTAGTAAA-----CACTGAAATTTGATTTGAAGATATGGAATCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 109557 472 - 111706 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACAGGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCTCCTTACCTGCAGAGATCTCAGACACCGCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCAT----CCTAGCC--GGCCACCGCC--GCT--GCAGAACTGCTGGCCG--TCTCACGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCCGCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGCCA------CACAAATGTGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAAGCTGA--CCCCCTGCCTTGCTTGCCCAGTAAACACTCCGCTGAAATTTGATTTGAAGATGTGGAATCA i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192423876 472 - 192460366 GCCATCCGCACACTCTTTATCATCAACGATGGCACTTCACAGGTAGCACTGTGGTTCCTTGTCACCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGAGGGGGGAGGCCCACCA-GCCCCTCT-GGCCTCCTTACCTGCAGAGATCTCAGACACCGCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCAT----CCTAGCC--GGCCACCGCC--GCT--GCAGAACTGCTGGCCG--TCTCACGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCCGCCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGCCA------CACAAATGTGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTCA----GCAAGCTGA--CCCCCTGCCTTGCTTGCCCAGTAAACACTCCGCTGAAATTTGATTTGAAGATGTGGAATCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187344000 472 + 187378091 GCCATCCGCACACTGTTTATCATCAACGATGGCACTTCACAGGTAGCACTGTGGTTCCTTGTCATCAACCCAAGAGAGCCTGCCCTTGCC--------------CACACTGAAATTCACTCCCAGAGCCCCACGACGGGGGAGGCCCACCA-GCCCCTCT-GGCCTCCTTACCTGCAGAGATCTCAGACACCGCAACCTCCCAGCAGAAGAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCAT----CCTAGCC--GGCCACCGCT--GCT--GCAGAACTGCTGGCCG--TCTCACGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCCGCCTCCTGCCAAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGCCA------CACAAATATGCAGGCTGAGGGCTGGCAGGTTGAGGCTGTTA----GCAAGCTGA--CCCCCTGCCTTGCTTGCCCAGTAAGCACTCCGCTGAAATTTGATTTGAAGATGTGGAAtca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91369065 471 + 91754291 GTCATCCACACACTGTTTATCATCAACGATGGCACTTCACAGGTAGCACTGTGGTTCCTTGTCATCAACCCAAGAGAGCCTGCCCTTGTC--------------CACACTGAAATTCACTCCCAGAGCCCCATGAGGGGAGAGGCCCACCA-GCCCCTCT-GGCCTCCTTACCTGCAGAGATCTCAGACACCGCAACCTCCCAGCAGAATAAGAAAAGGGGCAGAGCCAGACCCCAGAGAGAGCCCAT----CCTAGCC--GGCCACCACC--ACT--GCAGAACTGCTGGCTG--TCTCACGGGTACCTTTTCCTGCTTCCTCAAGCCAGGGA----GGAGGGGCCATCTCCTGCCGAGGTGTGTGACTGGCTAGTTGCCAGGATGTGGCCA------CAGAAATGTGCAGGCTGCGGGCTGGCAGGTCGAGTCTGTCA----GCAAGCTGA---CCCCTGCCTTCCTGGCCCAGTAAACACTCGGCTGAAATTTGATTTGAAGATGTGGAATCA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73850840 469 + 74750902 ATTATTTGCACACTCTG----AACAGTAATAGCACTTTATGTGTAGCACTGTGGCTCATTCTAATCATCCT--GAGAGCCTACCC-TGCCCAGGAAAGGCTGCCCATACTGAAATTCACTCCCGGAGCCCCACTAGGGAAGAAGCCCACCA-GGAAGTCT-GGCCTCCTTACCTGCAGCACTCCCAGAGACCCCAGCCTCCCAGCAGAAAAAGAAAAGGGGCAGAACCAGACCCCAGAGAGAGCCCAT----CCTAGCCA-GGGCGCTGCCTGTCTCCGCAG-ACGGCCGGCCG-------------CTTTTTCCTGCTTCCTTAAACCGGAGA----GGAGGGGCAGCCTCCTGCCCAGGTGTGTGACTGGGGAGTTTCCGAGACGTAGCCAGATGATCAGAAACGTACA-----------GGCAGGTTGGGGCTGTCA----GCAAGCTAACACCCCCTGCCTTCCTTGCCCAGTAATTTCTCCTCTGAAATTTGATTTGAAGATATGAAATCA i calJac3.chr17 I 11 C 0 s mm10.chr16 32797202 423 + 98207768 GCCATTAATACA------ATTAACAAAAATGTC---------------------TCCCTTG-------CCCACAAAGAGCTGTCTTTGCC--------------AGCACTGAAA------CCCAGAGCTCCACCAGGGAGGATCCCCGGGG-GCTGTCCT-G--TTCCTTACCTGGAGAGCTCACACTGACGCCAACCTTCCAGCAGAAGACAAGGAGGGGCACAGCCAGGCCCCAGACAGAGCCCATCGTGCCTGGCCCTGACCACCGCT--GTCTGCCGGACCTGCCTGCTGTCTCTCCTCACCACCCTTTCCTGCTTCCTCAACCCCGGGA----GGAGGGGCAGACGACTGCCCAG--GTGTGACTGGGTAGGTTCCAGGAGGCAGCCGGGTGACCACAAATGTGCAGGCTGA----CAGCAGGTTCATGGTCCCACTCCCCACCCTGA-CTCCCATGCCTTGCCT----------------------CTCTGATTTGAAGATATGGCATCA i mm10.chr16 C 0 I 4922 e canFam3.chr33 2329403 5697 - 31377067 I a score=661286.000000 s hg38.chr3_KI270937v1_alt 73639 259 + 165607 CTAGC-------------tttt-----tttt----------tttttttttgagatggagtcttgctctgtcacccaggctggagtgtacagtaatgagatctcagctcaatgaaacctcttcctcccgggatccaacaattctcctgcctcagcctctggagtagctgggattataggcgcgcaccaccacgtccggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacctcaggtgatctacctacctca s panTro4.chr3_GL389630_random 51758 255 - 103936 CTAGC----------------------tttt----------tttttttttgagatggtgtcttgctctgtcacccaggctggagtgtacagtaatgagatctcagctcagtgaaacctcttcctcccgggatcaaacaattctcctgcctcagcctctggagtagctgggattacaggcgcgcaccatcacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctagtctcgaactcctgacctcaggtgatctacccacctca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2392430 268 - 202140232 CTAGCttttttttt----tttt-----tttt----------tttttttttgagatggagtctcgctctgtcacacaggctggagtgtacagtagtgagatctcagctcaatgaaacctcttcctcccggtatcaagcaattctcctgcctcagcctccggagtagctgggattacagatgtgcacaaccacgcccggctaatttttgcatttttagtagagacggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacctgcctca i ponAbe2.chr3 C 0 I 7739 s nomLeu3.chr11 2859636 253 - 123690457 CTAGC------------------------tt----------tttttttttgacatggagtcttgctctgttgcccaggctggagtgtacagtagtgagatctcagctcattgaaacctcttcctcctgggatcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccacgcccggataatttttatatttttagtagagacggggtttcaccatgttggccaggcttgtctcgaactcctgacctcatgtgatccgcctgccttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 110029 259 - 111706 CTAGC-------tt----tttt-----tttg----------tttgtttttgagatggagtctcgccctgtcgcccaggctggagtgtacagcagtgagatctcagctcactgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcggttgggattacaggcgc-cgccaccacgcccagct-attttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgattcgcccgccttg i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192424348 260 - 192460366 CTAGC-------tt----tttt-----tttg----------tttgtttttgagatggagtctcgccctgtcgcccaggctggagtgcacagcagtgagatctcagctcactgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgggattacaggcgc-cgccaccacgcccagctaattttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgattcgcccgccttg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187344472 256 + 187378091 ctagc-------tt----tttt-------------------tttttttttgagatggggtctcgccctgtcgcccaggctggagtgtacagcagtgagatctcggctcaccgaaacctcttcctcctgggttcaagcgattctcctgcctcagccgcccgagcagttgggatcacaggtgc-cgccaccacgcccggctaattttcgtatttatggtagagacggggtttcaccgtgctggccaggcttgtcttgaactcctgacctcaggcgatccgcccgccttg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91369536 266 + 91754291 CTAGC-------tt----ttttttttttttt----------tttttttttgagatggagtctcgctctgtcgcccaggctggagtgtacagcagtgagatctcagctcactgaaacctcttccccccgggatcaagcaattctcctgcctcagccacccgagtagttgggattacaggcgtgcgccaccatgcccagctaattttcgtatttatggtagagacggggtttcaccatgctggccaggcttgtcttgaactcctgacctcaggcgatccgcccgccttg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73851309 266 + 74750902 CTAGG-------TTCCTGttgt-----ttttggttttggggtttttttttgagatggagtctcgctctgtcgcccaggctggagtgcacagtagtgagatctcagctcactgaaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacagatgcctgccaccacgcctggctaattttggtatattt-------acaaaatgtcaccatgttggccaggctgttctcaacctcctgacctga-gcgat-tgcctgctttg i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I a score=132011.000000 s hg38.chr3_KI270937v1_alt 73898 46 + 165607 gcctcccaaagtgctgggagtacaggcatgagccactgcacccagc s panTro4.chr3_GL389630_random 52013 46 - 103936 gcctcccaaagtgctgggagtacaggcgtgagccactgcacccagc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400437 46 - 202140232 gcctcccaaagtgctgggagtacaggcgtgagccactgcacccagc i ponAbe2.chr3 I 7739 C 0 s nomLeu3.chr11 2859889 46 - 123690457 gcctcccaaagtgctgggattacaggcgtgagccaccacgcccagc i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 110288 46 - 111706 gcctcccaaagtgctgggatgacaggcctgagccaccgcgcccggc i rheMac3.chrUn_JH291127 C 0 C 0 s macFas5.chr2 192424608 46 - 192460366 gcctcccaaagtgctgggatgacaggcctgagccaccgcgcccggc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187344728 46 + 187378091 gcctcccaaagtgctgggatgacaggcctatgccaccgcgcccggc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91369802 46 + 91754291 gcctcccaaagtgctgggatgacaggcctgagccactgcgcccggc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73851575 46 + 74750902 gcctccaaaaatgctgggattacaggcatgagccaccgggcccagc i calJac3.chr17 C 0 I 9517 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I a score=7896.000000 s hg38.chr3_KI270937v1_alt 73944 3 + 165607 caa s panTro4.chr3_GL389630_random 52059 3 - 103936 caa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400483 3 - 202140232 caa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2859935 3 - 123690457 cAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chrUn_JH291127 110334 3 - 111706 cAA i rheMac3.chrUn_JH291127 C 0 N 0 s macFas5.chr2 192424654 3 - 192460366 cAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187344774 3 + 187378091 caa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91369848 3 + 91754291 cAA i chlSab2.chr15 C 0 I 7898 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I a score=1659.000000 s hg38.chr3_KI270937v1_alt 73947 2 + 165607 gt s panTro4.chr3_GL389630_random 52062 2 - 103936 gt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400486 2 - 202140232 gt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2859938 2 - 123690457 AT i nomLeu3.chr11 C 0 I 8064 s macFas5.chr2 192424657 2 - 192460366 AT i macFas5.chr2 C 0 I 7377 s papAnu2.chr2 187344777 2 + 187378091 at i papAnu2.chr2 C 0 I 7250 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369851 7898 + 91754291 I a score=42511.000000 s hg38.chr3_KI270937v1_alt 73949 173 + 165607 gcttttattttcttaagccaattaattagagctcttttatatattttcagtagcaaaacactgtgtacaca-----acaacacataaatacacagatgtattaggtatgctgaaagaagttcatcttatagattcataaagagc-ttttttcttacaccttcaaattcttttttac------ttt s panTro4.chr3_GL389630_random 52064 179 - 103936 gcttttattttcttaagccaattaattagagctcttttatatattttcagtagcaaaacattgtgtacaaa-----acaacacataaatacatagatgtattaggtatgctgagagaagttcatcttatagattcataaagagc-ttttttcttacaccttcaaattcttttttactttcttttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400488 178 - 202140232 gcttttattttcttaagccaagtaattagagcccttttatatattttcagtagcaaaacattgtgtacatgtgtacacaacacataaatacatagatgtattaggtatgctgaaagaagttcatcttatagattcataaagagctttttttcttacaccttcaaattcttttttac-------tt i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369851 7898 + 91754291 I e papAnu2.chr2 187344779 7250 + 187378091 I e macFas5.chr2 192424659 7377 - 192460366 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=172121.000000 s hg38.chr3_KI270937v1_alt 74122 225 + 165607 tttttttttttttttgagacagagtctcactctgttgcccaggc-tggagtgcaatggcttgatctcgactcactgcaacctctgcctcctggcttcaagtgattctcctgcctcagcttcctgagtagctgggattataggcacctgccaccacacctggctaa-ttttttttgtatttttagtagagacggggtttcaacatgttggccaagatggttttgaact s panTro4.chr3_GL389630_random 52243 226 - 103936 tttttttttttttttgagacagagtctcactctgttgcccaggc-tagagtgcaatggcttgatcttgactcactgcaacctctgcctcctggcttcaagtgattctcctgcctcagcttcctgagtagctgggattacaggcacctgccaccacacctgactaatttttttttgtatttttagtagagacggggtttcaacatgttggccaagatggttttgaact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400666 225 - 202140232 tttttttttttttttgagacagagtctcactctgttgcccaggc-tggagtgcaatggcttgatctcgactcactgcaacctctgtctccttgcttcaagcgattctcctgcctcagcttcctgagtagctgggattataggcacctgacaccacacctggctaa-ttttttttgtatttttagtagagacggggtttcaccatgttggccaggatggttttgaact i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192432036 221 - 192460366 tctttttttttttttgaggcggagtctcgctctgttgcccaggc-tggagtgcagtggccggatctcagttcgctgcaagctccacctcccgggttcctgccattctcctgcctcagcctcccgagtagctgggattacaggtgcctgccaccacgcccggctaa--ttcttttgtatttt---tagagacagggtttcaccatgttggccaggatggttttgaact i macFas5.chr2 I 7377 C 0 s papAnu2.chr2 187352029 222 + 187378091 tctttttttttttttgaggcagagtctcgctctgttgcccaggcatggagtgcagtggccggatctcagttcgctgcaagctccacctcccgggttcctgccattctcctggctcagcctcctgagtagctgggattacaggtgcctgccaccacgcccggctaa--ttcttttgtatttt---tagagacggggtttcaccatgttggccagaatggttttgaact i papAnu2.chr2 I 7250 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369851 7898 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1964384.000000 s hg38.chr3_KI270937v1_alt 74347 1618 + 165607 cctgacctcaagagatctttgcggctcagcctcccaaat-gctaggattacagacgtgagccaccgtgcccagccacaccttcgaattcttgataacctgttttactactctaagcggttgtcagctaaatagccttgaatttgcattttaaggaaactgaggtgaaaatcgaatagcaaaatttacatcataacgtatggagagaaaaagtctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattatagaaattataaaggccttttaaatatatacacacacacaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgcggtggctcacgcctgtaatcccagcaccttgggaggccgaggcgggcagatcacctgaggtcaggagttggagaccagcctgacgaacatggagaaaccccatctctactaaaaatacaaaaaattagccaggcgtggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcacttgaaccagggaagcggagactgtggtgacccaagatcacgccattgcactccagcctgggcaacaagagtgaaactctgcctcaaaaaaaaaagaaaaaaaaaagagaaagaaaagaaaaaaagaaatttagccatgaaataaatacaaattccccagtttacaaacagaaaaactatctgatccaaacagtgttttttatcttaataggaaaataacagcaaatttaaagcaggcagagaagaaactagagaaaaaagaggactcaggaactctacagtttgcaggtcaacctcagggct--ccttttttttttaatgtaaATGTGCAGAAAGACCATATTActtccactttacgtaaactctggcaagtagaggcgccatgaaccctatggagtactcg-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgacaacaacagttcagttcctcatgcaaat--acatagacaacccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagag---aaaaaaaaAAAAAAaaacagccaagaccattccctgtaaactgtgctcagccaccccttctttgtagttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaagacagcagagctttagacctaagaagaatccgcccatcactcttgaaactccacaaagaaaacagagcaccctggaaggggtgagtggcccctttgttccggatcctttaaaggggctcgagtcattggaagccttctctagat-ttttttggtcccgcagatggcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttG---TTTTTGTTTGTTTGTTTTTTAAGACAGAAAGCAAACACAGAAACCAAGCACGTGATTTGTTGgtttttttc-----------gtttag s panTro4.chr3_GL389630_random 52469 1617 - 103936 actgacctcaagagatctttgcggctcagcctcccaaat-gctaggattacagacgcgagccaccgtgcccagccacaccttcgaattcttgataacctgttttactactctaagcggttgtcagctaaatagccttgaatttgcattttaaggaaactgaggtgaaaatcgaatagcaaaatttacatcataacgtatggagagaaaaagtctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattatagaaatTATAAAGGCCTTTTAAatatatgcacacacgcaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgcggtgactcacgcctgtaatcccagcaccttgggaggctgaggcgggcagatcacctgaggtcaggagttggagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccaggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcacttgaaccagggaagcggagactgtggtaacccaagatcacgccgttgcactccatcctgggcaacaagagtgaaactctgcctcaaaacaaaaa-aaaaaaaagagagaaagaaaagaaaaaaagaaatatagccatgaaataaatacaaattcaccagttttcaaacagaaaaactgtcaggtccaaacagtgttttttatgttaacagaaaaataacagcaaatttaaagcaggcagagaagaaactagagaaaaaagaggactcaggaactctatagtttgcaggtcaacctcagggct---cttttttttttaatgtaaACATGCAGAAAGACCATATTActtccactttacataaactctggcaagtagaggcaccatgaaccctatggagtactcg-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcagtctctcatttacctatgacaacaacagttcagttcctcatgcaaat--acatagacaacccaaactgagattcattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagagaaaaaaaaAAAAAAAAAaaacagccaagaccattccctgtaaactgtgctcagccaccccttctctgtagttctcgtctgccattacacacgccaaggtcaaatcctctcacagtgcagggtcatctctggttcctccaaagccaaagaggtcacgtcatgccatacaggaaga---cagagctttagacctaagaagaatccgcccatcactcttgaaactccataaagaaaaaagagcaccctggaaggggtgagtggcccctttgttccgaatcctttaaaggggctcaagtcattagaagccttctctagat-ttttttggtaccgcagatggcaaaggcaggaggaggtatagggaggaagaaaagtaagtgaaagagcatttgttG--TTTTTTGTTTGTTTGTTTTTTAAGACAGAAAGCAAACACAGAAACCAAGCACATGATTTGTTGgtttttttc-----------gtttag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2400891 1600 - 202140232 cctgacctcaagagatctttgcggctcagcctcccaaagagctaggattacagatgtgagccactgcacccagccacaccttcaaattcttgataacctgttttactactctaagcagttgtcagctaaatagccttgaatttgcattttaagaaaactgaggtgaaaatcgaatagcaaaatttacatcataacatatggagagaaaaactctggtgtgctggagggaaattaaaacagatttaattgccaattaaacataaaattatagaaatTATAAAGGCCTTTTAAGTATATATacacacacaaagatcctatagcttttacttcagaaatttagccatgaaagctgggcgtgatgactcatgcctgtaatcccagcaccttgggaggccaaggcggccagatcacctgaggtcaggagtttgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccaggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaaccagggaggtggagattgtggtgacccaagatcacgccattgcactccagcctgggcaacaagagtgaaactctgtc--------------aaaaaaaaagagaaagaaaagaaaaaaagaaatgtagccatgaaataaatacaaattcaccagtttaccaacagaaaaactgtcagatccaaacagtgttttttatcttaatagaaaaataacagcaaatttaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaactctattgtttgcaggtcaaccttagggct---cttttttttttaatgtaaATGTGCACAAAGACCATATTActtccactttacataaactctggcaagtagaggcaccatgaaccctgtggagtactca-------gctgggaggagcaaacgccctttctctttggagctgagaaaactcaatctctcatttacctatgacaacaacagttcagttactcatgcaaatacacacagacaacccaaacggagattgattttgggagaaaaagcaatagagaagaccctttaggatgcatctctgaactagaattaggatccttaaatcacagcttcctagaagag------aaaaaaaaaaaacccagCCAAGaccattccctgtaaactgtgctcagccaccctttctttgtagttctcatctgccattacacacgccaaggtcaaatcctctcacagtgtagggtcatctctggttcccccaaagccaaagtggtcaggtcatgccatacaggaaga---cagagctttagatctaggaagaatccgcccatcactcttgaaactccacaaagaaaacagagcaccccagaaggggtgaatggcccctttgttctgaatcctttaaaggggctcgagtcagtagaagccttctctagat-ttttttggtactgcagatggcaaagggggcaggaggtatagggagaaagaaaagtaagtgaaagagcatttcttG---TTTTTTTTGGTTCGTTTTTTAAGACAGAAAGCAAACGCAGAAACCAAGCACATGATTTGTTGGTTTTTTGG-----------GTTTAG i ponAbe2.chr3 C 0 I 2 s rheMac3.chr2 192580555 1612 + 192599291 cctgacctcaagagatcttcgcgactcagcctcccaaagtgctaggattacgggcgtgagccactgcacctggccACacctttgaattcttgatagcctgttttacttctctaagcagttgtcagctaaatagcgttgaatttgcattttaaagaaactcaggtgaaaatcaaatagcaaagtttacatcataaggtatggagagaaaaagtctggtgtgctagagggaaattaaaacagatttaattgccaattaaacataaaattatagaaatTATAAAGGCCTTTTAAatatacatacacacacaaagatcctatagcttttacttcaaaaatttagccatgaaagctgggcacagtggctcatgcctgttatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcgtttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactccagcctgggcaacaagagtgaaactgtctc-------aaaaaaaaaaaagaaagaaaaagaaaagaaaaaaagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcggatccaaacagtgttttttatcttaatagaaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaattctgtcgtttgcaggtcaaccttagggtc-tttttttttttttaatgtaaATGTGCACAAAGACCATATTACAtccactttacataaactctggcaagtagaggcacca--gaactgatggagtactcgGGTTCATgctgggtggggcaaacgccctttctcttcggagctgagaaaactcaatttctcatttacctatgaaaacaacagttcagttcctcatccaaatgcacacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttacatcacggcttcctagaagag----------gaaaaaaaaccagccaagaCCATTCCCTGCaaac--tgctcagccaccacttct------ttctcgtctgccattacacacgccaaggtccaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcaccccgaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctaggtgttttttggtactgtagatggcaagggggaaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttggtttttttgttgg--tttttttTAAGACAGAAAGCAAACACAGAAACCAAGTGCAtggtt-gtttgtttgtttggttgttggttagtttag i rheMac3.chr2 N 0 I 7 s macFas5.chr2 192432257 1613 - 192460366 cctgacctcaagagatcttcgagactcagcctcccaaagtgctaggattacgggcgtgagccactgcacctggccACacctttgaattcttgatagcctgttttacttctctaagcagttgtcagctaaatagcgttgaatttgcattttaaagaaactcaggtgaaaatcaaatagcaaagtttacatcataaggtatggagagaaaaagtctggtgtgctagagggaaattaaaacagatttaattgccaattaaacataaaattatagaaatTATAAAGGCCTTTTAAatatacatacacacacaaagatcctatagcttttacttcaaaaatttagccatgaaagctgggcacagtggctcatgcctgttatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcgtttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactccagcctgggcaacaagagtgaaactgtctc-------aaaaaaaaaaaagaaagaaaaagaaaagaaaaaaagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcagatccaaacagtgttttttatcttaatagaaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcaggaattctgtcgtttgcaggtcaaccttagggtc-tttttttttttttaatgtaaatgtgcacaaagaccatattacatccactttacataaactctggcaagtagaggcacca--gaactgatggagtactcgGGTTCATgctgggtggggcaaacgccctttctcttcggagctgagaaaactcaatttctcatttacctatgaaaacaacagttcagttcctcatccaaatgcacacagacaagccaaactgagattcattttgggagaaaaagcaatagagaagaccctttagaatgcatctctgaactagaattaggatccttacatcacggcttcctagaagag----------gaaaaaaaaccagccaagaCCATTCCCTGCaaac--tgctcagccaccacttct------ttctcgtctgccattacacacgccaaggtccaatcctctcacagtgcaaggtcatctctggttcccccaaagccaaagaggtcaggtcatgccatacaggaaga---cagagctttagacctaagaagaatctgcctatcactcttgaaactccacaaagaaaacagagcaccccgaaagcggggagtggcccctttgtactgaatcctttaaagggatt--agtcattagaagccttctctaggtgttttttggtactgtagatggcaagggggaaaggaggtatagggtggaagaaaagtaagtgaaagagcatttgttggtttttttgttgg-tttttttTTAAGACAGAAAGCAAACACAGAAACCAAGTGCAtggtt-gtttgtttgtttggttgttggttAgtttag i macFas5.chr2 C 0 I 5 s papAnu2.chr2 187352251 1600 + 187378091 cctgacctcaagagatcttcgcgactcagcctcccaaagtgctaggattacgggcgtgagccactgcacctggccacacctTTGAATTCTTGATAGCCTGTTTTACTTCTCTAAGCAGTTGTCAGCTAAATAGCgttgaatttgcattttaaagaaactcaggtgaaaatcaaatagcaaaGTTTACATCATAAGGTATGGAGAGAAAAAGTCTGGTGTGCTAGAGGGAAATTAAAACAGATTTAATTGCCAATTAAACATAcaattatagaaattataaaggccttttaaatatacatacacacacaaagatccTATAGCTTTTACTTCAGAAATTTAGCCATGaaagctgggcacgatggctcatgcctgtaatcccagcaccttgggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaaaattagccgggcatggtggtgcatgcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgaaccagggagacggaggttgcagtgagccaagatcactccattgcactacagcctgggcaacaagagtgaaactctgtc-------tcaaaaaaaaaagaaagaaaaagaaaagaaaaaaagaaatttagccatgaaataaatacaaattcaccagtttgcaaacaaaaaaactgtcagATCCAAACAGTGTTTTTtatcttaatagaaaaataacagcaaattgaaagcaggcagagaagaaaatagagaaaaaagagaactcAGGAACTCTGTCGTTTGCAGGTCAACcttagggtcttttttttttttttaatgtaaatgtgcACAAAGACCATATTACATCCACTTTACATAAACTCTGGCAAGTAGAGGCACCA--GAACCGACGGAGTATTCGGGTTCATGCTGGGTGGGGCAAACGCCCTTTCTCTTCGGAACTGAGAAAACTCAATCTCTCATTTACCTATGAAAACAACAGTTCAGTTCCTCATCCAAATGCACACAGACAAGCCAAACTGAGATTCATTTtgggagaaaaagcaatagaGAAGACCCTTTAGAATGCATCTCTGAACTAGAATTAGGATCCTTAAATCACGGCTTcctagaagag----------gaaaaaaaaccagCCAAGACCATTCCCTGCAAAC--TGCTCAGCCACCGCTTTT------TTCTCGTCTGCCATTACACACGCCAAGGTCAAATCCTCTCACAGTGCAAGGTCATCTCTGGTTCCCCCAAAGCCAAAGAGGTCAGGTCATGCCATACCGGAAGA---CAGAGCTTTAGACCTAAGAAGAATCTGCCTATCACTCTTGAAactccacaaagaaaacagagcaCTTGGAAAGCAGAGAGTGGCCCCTTTGTACTGAATCCTTTAAAGGGATT--AGTCATTAGAAGccttctctagattttttttgGTACTGCAGATGGCAAGGGGGGAAGGAGGTATAGGGTGGAAGAAAAGTAAGTGAAAGAgcatttgttggtttttttgttgg---tttttttaagacagaaagcaaacacagaaaccaagtgcatggtt--tttgtttgtttg-----------gtttag i papAnu2.chr2 C 0 I 2 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91369851 7898 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=203250.000000 s hg38.chr3_KI270937v1_alt 75965 112 + 165607 ttttttcctcttttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat s panTro4.chr3_GL389630_random 54086 112 - 103936 ttttttcctcttttgcagctgcaaggaattttagccaaattagagaggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2402493 110 - 202140232 TTTTTTCCTTttttgcagctgcaaggaattttagccaaattagagaggttttgttacccataatttggaattctcacttggatttgaccaagtcaggt--agttggtcaaac i ponAbe2.chr3 I 2 C 0 s rheMac3.chr2 192582174 111 + 192599291 ttttTTCCTCttttgcagttgcaaggaatttttgccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i rheMac3.chr2 I 7 C 0 s macFas5.chr2 192433875 111 - 192460366 ttttttcctcttttgcagttgcaaggaattttagccaaattagag-ggctttgttacccataatttggaattctcacttggatttgaccaagtcaggtagagttggtcaaat i macFas5.chr2 I 5 C 0 s papAnu2.chr2 187353853 111 + 187378091 ttttttcctcttttgcagTTGCAAGGAATTTTAGCCAAATTAGAG-GGCTTTGTTACCCATAATTTGGAATTATCACTTGGATTTGACCAAGTCAGGTAGAGTTGGTCAAAT i papAnu2.chr2 I 2 C 0 s chlSab2.chr15 91377749 111 + 91754291 tttttTCCTCttttgcagttgcaaggaattttagccaaattagag-ggctttgttatccataatttggaattctcacttggatttgaccaagtcaggcagagttggtcaaat i chlSab2.chr15 I 7898 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73851621 9517 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1345877.000000 s hg38.chr3_KI270937v1_alt 76077 625 + 165607 ctgatgagagaaagaccagaaaa-aacaacaacaacagaagtcaaatgatatgaccacagactgctctaatgggaagaagaaattcagaccagctggttgttaaccttcagccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaagactgctctctaccatccttgaagcaggaaaaaaactcgaacttgtcttccctgctgggag---caagctcaaactccataaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttttgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggttagctcatgctgctaccaagcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttattgttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc s panTro4.chr3_GL389630_random 54198 626 - 103936 ctgatgagagaaagaccagaaaacaacaacaacaacaaaagtcaaatgatatgaccacagactgctctaatgggaagaagaaattcagaccagctggttgttaaccttcagccaagacaaaacctcagttcagctacttacctagggatgggtctcaggctgaagactgctctctaccatccttgaagcaggaaaaaaactcgaacttgtcttccctgctgggag---caagctcaaactccataaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttttgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggttagctcatgctgctaccaagcaccaatagatctgtcaaaggtcaggggcacctcaactcagaatccctccatggttaccaAAAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttattgttccaaggttgaagatgcacacccgtgacacagcctcaggatgtc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2402603 625 - 202140232 ctgatgagagaaagaccagaaca-aataacaacaaaaaaagccaaatgatgtgaccacagactgctctaatgggaagaagaaattaagaccagctggttgttaacctttagcccagacaaaatctcaattcagctacttacctagggatgggtctcaggctgaagactgctctccaccatccttgaagcaggaaaaaaacttgaacttgtcttccctactgggag---caagctcaaaatccataaaagagttgtcagccttccatcatcacggacccaggaaatcttgccttccttcttggaagcaaataaaactccaaaagaaggggagggggagttgtacatc-aaataaactttagatcacgaccaagttgtgagagatc-agggactctctggagggggtgctcccagacctcagcaaattgtcctgttggtttgagccataaggttagctcgtgctgctaccaagcaccaatagctctgtcaaaggtcaggggcatctccactcagaatccctccacggttaccaACAtgtgaaccccccaaatctgagacaggtctcagttaatttagaaagtttatttttccaaggttgaagatgcgcgtccgtgacacagcctcaggaggtc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192582285 623 + 192599291 ctgatgagagaaagtccagaaca-aacagcaacaaaaaaagcccaatgaaatgaccactgactgccctaatggtaagaagaaattcagaccagctggttgttaagctttaaccaagacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccatagaagagttgcctgccttccatcatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacaac-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtaaggttagctcatgttgctatcatgctccaatagatctgtcaaaggtcgggggcatctccactcagaatccctccatggctgcAAA-Atgtgaactccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaagtc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192433986 623 - 192460366 ctgatgagagaaagtccagaaca-aacagcaacaaaaaaagcccaatgaaatgaccactgactgccctaatggtaagaagaaattcagaccagctggttgttaagctttaaccaagacaaaacctcaatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctagaagcaggaaagaaactcgaacttgtcttccctattgggag---caagctcaaactccatagaagagttgcctgccttccaccatcatgcacccaggaaatcttgccttccttattggaagcaaataaaactccaaaagaaggggagggggaattgtacaac-aaataaactttagattacgaccaagttttgagagatc-aggggttctctggagtgggtgctcccagacctcagc-aattgtcctattggtttgagccgtagggttagctcatgttgctatcatgctccaatagatctgtcaaaggtcgggggcatctccactcagaatccctccatggctgcAAA-Atgtgaactccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaagtc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187353964 622 + 187378091 CTGATGAGAGAAAGTCCagaaca-aacagcaacaaaaaaagtccaaTGAAATGACCACTGACTGTCCTAATGGTAAGAAGAAATTCAGACCAGCTGGTTGTTAAGCTTTAACCACGACAAAACCTCAATGCAGCTACTTACCTAGGGATGGGTCCCAGGCTGAAGACTGCTctctaccatcctagaagcaggaaagAAACTCGAACTTGTCTTCCCTATTGGGAG---CAAGCTCAAACTCCATAGAAGAGTTGCCTGCCTTCCATCATCATGCACCCCGGAAATCTTGCCTTCCTTATTGGAAGCAAATAAAACTCCAAAAGAAGGGGAGGGGGAATTGTACAGC-AAATGAACTTTAGATTACGACCAAGTTTTGAGAGATC-AGGGGTTCTCTGGAGTGGGTGCTCCCCGACCTCAGC-aattgtcctattggtttgagcCGTAAGGTTAGCTCATGTTGCTACCAAGCACCAATAGATCTGTCAAAGGTCAGGGGCATCTCCACTCAGAATTCCTCCATGGCTGCCAA-ATGTGAACGCCCCAAATCTGAGACAGGTGTCAGTGAAATTagaaggtttattttgccaaggctgaGGACACATgtccgtgacacagcctcaggaggt- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91377860 619 + 91754291 ctgatgagagaaagtccagaacg-aacagcaacaagaaaagcccaatgaaatgaccactgactgccctaatggtaagaagaaattcagaccagctggttgttaagctttaaccaagacaaaacctctatgcagctacttacctagggatgggtcccaggctgaagactgctctctaccatcctggaagcaggaaagaaactcgaacttgtcttccctgttggg-------agctcaaactccatagaagacttgcctgccttccatcgtcatggacccgggaaatcttgccttccttattggaagcaaataaaactccaaaagaa-gggagggggaattgtacagc-agataaactttagatcacgaccaagttttgagagatcggggggttctctggagggggtgcttccagacctcagc-gattgtcctattggtttgagccgtaaggttagctcatgttgctaccaagcaccagtagatctgtcaaaggtcaggggcatctccactcagaacccctccatggctgccaA-Atgtgaaccccccaaatctgagacaggtctcagtgaaattagaaggtttattttgccaaggctgaggacacatgcccgtgacacagcctcaggaggtc i chlSab2.chr15 C 0 I 32 s calJac3.chr17 73861138 606 + 74750902 CTGATGAGAGAAAGACCAGAACA-AACAACAGAAAAAAAAACC-AACAatatagtcactgagtgctctcatgg-aaggagaaattaagaccaact-gttgttaaacttta----agacaaaaccccagttcagctgcttacctagggatgagtctcaggctgaaggctgctctctaccatcct---------aaaaagactccaacttgtcttccctgctgagaggttcaagctgaagccccgtagaggagttg-ctgccttccatcatcatggacgcaggaaatcgtgccttccttgctggaagcaagtaaaactccaaaaaca------ggggagttgtacagcaaaataaactttagatcacgaccaaattttgggagatc-agacattctttggagggggtgctcccagacctcagcaaattgtcccattggtttgaaccataaggttaactcatgcaggtaccaagcaccaacagacttgtcaaaggtcaggggcatctccactcagaatccctttatggttaccaAAAtgtgaaccccaaatatctgagataggtctcagtcaatttagaaactttattttgccaaggttgaggacgcacacccgtcacgcagcctcaggaggtc i calJac3.chr17 I 9517 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=19907.000000 s hg38.chr3_KI270937v1_alt 76702 24 + 165607 ctgacgacatgtg-ccaaggtgg------------------tc s panTro4.chr3_GL389630_random 54824 21 - 103936 ct---gacatgtg-ccaaggtgg------------------tc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403228 42 - 202140232 ctgacgacatgtg-ccaaggtggtcagagcacagcttgatttc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192582908 24 + 192599291 ctgacgacgtgtg-ccaaggtgg------------------tc i rheMac3.chr2 C 0 I 18 s macFas5.chr2 192434609 24 - 192460366 ctgacgacgtgtg-ccaaggtgg------------------tc i macFas5.chr2 C 0 I 18 s papAnu2.chr2 187354586 15 + 187378091 ctga----------ccaaggtgg------------------tc i papAnu2.chr2 C 0 I 18 s calJac3.chr17 73861744 43 + 74750902 ctgatgacctgggcccaaggtaggcggggcacagcctgggttc i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378479 32 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=999360.000000 s hg38.chr3_KI270937v1_alt 76726 454 + 165607 atacgttttagggagacatgagacatcaatcaacacatgtaagatgaacattggttcagtctggaaaaggccgggcaacgccaagcaaacgtgggacaactcgcagccaggagaaagcttccaggtcacaggtgggtgagagacaaa-ggtcgcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcaggtcggccctaagccattcctggcttgactttcccctttagcttagtgactttgggggcccaagatttattttcctttcacaAAACAATAAACATAACAAATAAGTGAATTATAGAAAGGTGAAAACTATGGAAAAAAAAGAAAAACAGGGAGAAAGAATCCTGAACACTGACGTGGGGAGGGCA-GGTGCCAGCTGCAGTACTA--A s panTro4.chr3_GL389630_random 54845 455 - 103936 atacgttttagggagacatgagacatcaatcaacatatgtaagatgaacattggttcagtctggaaaaggccgggcaacgccaagcaaacgtgggacaactcgcagccaggagaaagcttccaggtcacaggtgggtgagagacaaa-ggtagcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattttcctttcacaAAACAATAAACATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGGAAAAAAAAGAAAAACAGAGAGAAAGAATCCTGAACACTGACGTGGGGAGGGCAGGGTGCCAGTTGCAGTACTA--A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403270 454 - 202140232 atatgttttagggagacatgagacatcaatcaacatatgtaagatgaacatttgttcagtctggaaaaggcagggcaatgccaagcaaaggtgggacaacttgaagccaggagaaagcttccagggcacaggtgggtgagagacaaa-ggtagcattcttttgagtttctgatgggcctttccaaagaaggcaatcagatatgcatctatctcagtgagcag-ggggtgattttgaatagaatggggggcagtttgaccctaagccattcccagcttgactttcccctttagtttagtgattttgggggcccaagatttattttcctttcacaAAACAATAAACATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGGAAAAAAAAGAAAAACAGGGAGAAAGAATCCTGAGCACTGGCGTGGGGAGGGCA-GGTGTCGGCTGCAGTACTA--A i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192582950 454 + 192599291 acacattgtagggagacaagagacatcaatcagcatatgtaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagtctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG-GAAAAAAGAAAAACAGGGAGAAAGAATCCTGAGCACTGACTTGGGGAGGGCA-GGTGCCAGCTGCAGAACTAA-- i rheMac3.chr2 I 18 I 21 s macFas5.chr2 192434651 453 - 192460366 acacattgtagggagacaagagacatcaatcagcatatgtaagatgaacattggttcggtctggaaaaggcagggcaacgccaagcaaaggtggcacaactcgaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacggttacgttctttggagtttctgatgagtctctccaaagacggcactgagaaacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccgttcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGG-GAAAAAAGAAAAACAGGGAGAAAGAATCCTGAGCACTGACGTGGGGAGGGCA-GGTGCCAGCTGCAGAACTA--- i macFas5.chr2 I 18 C 0 s papAnu2.chr2 187354619 454 + 187378091 ACACATTGTAGGGAGACAAGAGACATCAATCAGCATATggaagatgaacattggttcggTCTGGAAAAGGCAGGGCAACGCCAAGCAAAGGTGGCACAACTCGAAGCCAGGAGaaagcttccaggtcacaggtgggTGAGAGACAAACGGTTACGTTCTTTggagtttctgatgagcctctCCAAAGACGGCAATCAGATacgcatctatctcagtgagcag-ggGGTGATTTTCAATAGAATCGGGGGCAGGTTGGCCCTAAGctgttcccagcttgactttcccctttagcttagtgattttgggggcccaagattTATTCTGCTTtcacaaaacaataaatataataaataagtgaattataGAAAGGTGAAAACtatggaaaaaaaagacaaacagggaGAAAGAATCCTGAGCACTGACGTGGGGAGGGCA-GGTGCCAGCTGCAGAACTA--- i papAnu2.chr2 I 18 C 0 s chlSab2.chr15 91378511 455 + 91754291 acacattgtagggagacaagagacatcaatcagcatacgtaagatgaacattggttcgatctggaaaaggcagggcaatgccaagcaaaggtggcacaacacaaagccaggagaaagcttccaggtcacaggtgggtgagagacaaacagttatgttctttagagtttctgatgagcctctccaaagacggcaatcagatacgcatctatctcagtgagcag-ggggtgattttcaatagaatcgggggcaggttggccctaagccattcccagcttgactttcccctttagcttagtgattttgggggcccaagatttattctcctttcacaAAACAATAAATATAATAAATAAGTGAATTATAGAAAGGTGAAAACTATGGAAAAAAAAGACAAACAGGGAGAAAGAATCCTGAGCACTGACGTGGGGAGGGCA-GGTGCCAGCTGCAGAACTA-A- i chlSab2.chr15 I 32 I 21 s calJac3.chr17 73861787 453 + 74750902 atacattttagggagacacgagacatcaatcaatatatgtaagaggaacattggttcagcctggaaaaggagggacaactccaagcaaaggtgggacaactggaagccagtagcaggcttccaggtcgcaggtagagaagagacacagggctgcattcttccgagtgtctgatcagcctctccaaaggaggcagttaaatatgcgtttatctcggtgagcagaggggtgactttggacagaacgggaggcaggtctgcccgaagcggttcccagcttgacttttcccttcagcttagtgactttggggccccaagatttattttcctttcacaAAACAATAAATGTAATATGTAAGTGAATTATTGAAAGGTGAAAACTATGG-AAAAAAATAAAAA-AAGGAGAAAGAATCATGAACACTGACATGGGCTGGG-G-GGTGCCAGCTGCAGTACTA--A i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=5813.000000 s hg38.chr3_KI270937v1_alt 77180 6 + 165607 ATAGCA s panTro4.chr3_GL389630_random 55300 6 - 103936 ATAGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403724 6 - 202140232 ATAGTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435104 6 - 192460366 ATAGCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187355073 6 + 187378091 ATAGCG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73862240 6 + 74750902 AGAGCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1618.000000 s hg38.chr3_KI270937v1_alt 77186 4 + 165607 -----GAGG s panTro4.chr3_GL389630_random 55306 4 - 103936 -----GGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403730 9 - 202140232 CTGGCATGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435110 4 - 192460366 -----GGGG i macFas5.chr2 C 0 I 2 s papAnu2.chr2 187355079 4 + 187378091 -----GGGG i papAnu2.chr2 C 0 I 2 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=2946.000000 s hg38.chr3_KI270937v1_alt 77190 5 + 165607 GGAGG s panTro4.chr3_GL389630_random 55310 5 - 103936 GGAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403739 5 - 202140232 GGAGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435116 5 - 192460366 GGAGG i macFas5.chr2 I 2 T 60 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=4976.000000 s hg38.chr3_KI270937v1_alt 77195 18 + 165607 GCAGGTGCCAGCTGCAGT s panTro4.chr3_GL389630_random 55315 18 - 103936 GCAGGTGCCAGCTGCAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403744 18 - 202140232 GCAAGTGCCAGCTGCAGT i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e macFas5.chr2 192435121 60 - 192460366 T e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=91.000000 s hg38.chr3_KI270937v1_alt 77213 1 + 165607 A s panTro4.chr3_GL389630_random 55333 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2403762 0 - 202140232 C e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e macFas5.chr2 192435121 60 - 192460366 T e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=3319.000000 s hg38.chr3_KI270937v1_alt 77214 16 + 165607 CTAAATACTGGTGTGG s panTro4.chr3_GL389630_random 55334 16 - 103936 CTAAATACTGGTGTGG i panTro4.chr3_GL389630_random C 0 I 78 s macFas5.chr2 192435061 16 - 192460366 CTGAGCACTGACGTGG i macFas5.chr2 T 60 C 0 e ponAbe2.chr3 2403762 0 - 202140232 C e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=5643.000000 s hg38.chr3_KI270937v1_alt 77230 28 + 165607 GGAGGGCAGGTGCCAGCTGCAGTACTAA s panTro4.chr3_GL389630_random 55428 25 - 103936 GGAGGGCAGGTGCCAGTTGCAGTGC--- i panTro4.chr3_GL389630_random I 78 C 0 s macFas5.chr2 192435077 28 - 192460366 GGAGGGCAGGTGCCAGCTGCAGAACTAA i macFas5.chr2 C 0 T 32 e ponAbe2.chr3 2403762 0 - 202140232 C e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=-74.000000 s hg38.chr3_KI270937v1_alt 77258 12 + 165607 ATACTGCTGTGC s panTro4.chr3_GL389630_random 55453 4 - 103936 --------GTGG i panTro4.chr3_GL389630_random C 0 T 107 e ponAbe2.chr3 2403762 0 - 202140232 C e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=6799.000000 s hg38.chr3_KI270937v1_alt 77270 72 + 165607 GGAGGGCAGGTGCCAGCTGCAGTACTAAATAGCAGAGGGGAGGGCAGGTGCCAGCTGCAGTACCAAATACTG s panTro4.chr3_GL389630_random 55350 72 - 103936 GGAGGGCAGGTGCCAGCTGCAGTACTAAATAGCAGAGGGGAGGGCAGGTGCCAGCTGTAGTACCAAATACTG i panTro4.chr3_GL389630_random T 107 C 0 e ponAbe2.chr3 2403762 0 - 202140232 C e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=16187.000000 s hg38.chr3_KI270937v1_alt 77342 60 + 165607 GTGTGGGGAGGGCAGGTGCCAGCTGCAGTGCGTGGGGAGGGCAGGTGCCAGCTGCAGTGT s panTro4.chr3_GL389630_random 55422 60 - 103936 GTGTGGGGAGGGCAGGTGCCAGTTGCAGTGCGTGGGGAGGGCAGGTGCCAGCTGCAGTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403762 60 - 202140232 GTATGGGGAGGGCAGGTGCCAGCTGCAGTGCATGGGGAGGGCAGGTGCCAGCTGCAGTGA i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e macFas5.chr2 192435105 32 - 192460366 T e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=17159.000000 s hg38.chr3_KI270937v1_alt 77402 38 + 165607 GTGGGGAGGGCAGGTGCCAGCTGCAGTACTAAATAGCG s panTro4.chr3_GL389630_random 55482 38 - 103936 GTGGGGAGGGCAGGTGCCAGCTGCAGTACTCAATAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403822 38 - 202140232 CTGGGAAGGGCAGGTGCCAGCTGCAGTACTAAAGAGTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435073 37 - 192460366 GTGGGGAGGGCAGGTGCCAGCTGCAGAACT-AATAGCG i macFas5.chr2 T 32 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862246 0 + 74750902 C e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=-96.000000 s hg38.chr3_KI270937v1_alt 77440 3 + 165607 -GGG s panTro4.chr3_GL389630_random 55520 3 - 103936 -GGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403860 3 - 202140232 -GGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435110 3 - 192460366 -GGG i macFas5.chr2 C 0 C 0 s calJac3.chr17 73862246 3 + 74750902 CGT- i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e papAnu2.chr2 187355083 2 + 187378091 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=845.000000 s hg38.chr3_KI270937v1_alt 77443 1 + 165607 G s panTro4.chr3_GL389630_random 55523 1 - 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403863 1 - 202140232 A i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435113 1 - 192460366 G i macFas5.chr2 C 0 I 7 s papAnu2.chr2 187355085 1 + 187378091 G i papAnu2.chr2 I 2 C 0 s calJac3.chr17 73862249 1 + 74750902 G i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=187.000000 s hg38.chr3_KI270937v1_alt 77444 1 + 165607 A s panTro4.chr3_GL389630_random 55524 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403864 1 - 202140232 G i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 187355086 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73862250 1 + 74750902 A i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e macFas5.chr2 192435114 7 - 192460366 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1607.000000 s hg38.chr3_KI270937v1_alt 77445 5 + 165607 AGATT- s panTro4.chr3_GL389630_random 55525 5 - 103936 AGATT- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403865 5 - 202140232 AGATT- i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435121 5 - 192460366 AGACG- i macFas5.chr2 I 7 C 0 s papAnu2.chr2 187355087 5 + 187378091 AGACG- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73862251 5 + 74750902 -GATTT i calJac3.chr17 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91378966 21 + 91754291 I e rheMac3.chr2 192583404 21 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=208184.000000 s hg38.chr3_KI270937v1_alt 77450 88 + 165607 TTTTTCTGAGCAACTTTGAGTCACTGCTCACATCTcatgccaatgtattaatcccaagtcaagggtcagatgaggcactcggatctct s panTro4.chr3_GL389630_random 55530 88 - 103936 TTTTTCTGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaagtcaagggtcagatgaggcactcggatctct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403870 88 - 202140232 TTTTTCTGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaagtcaagggtcagatggggcactcggatctct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192583425 88 + 192599291 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatatattaatcccaagtcaagggtcagatggggcacctggatctct i rheMac3.chr2 I 21 C 0 s macFas5.chr2 192435126 88 - 192460366 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatatattaatcccaagtcaagggtcagatggggcacctggatctct i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187355092 88 + 187378091 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTCATGCCAATATATTAATCCCAAGTCAAGGGTCAGATGGGGCACCTGGATCTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91378987 88 + 91754291 TTTTTCGGAGCAACTTCGAGTCACTGCTCACATCTcatgccaatgtattaatcccaagtcaagggtcagatggggcacctggatctct i chlSab2.chr15 I 21 C 0 s calJac3.chr17 73862256 88 + 74750902 TTCCTCTGAGCAACTTTGAGTCATTGCTCAGATCTcatgctgatacataaaaccccaatcaagggtcagatggggcgcttgggtctct i calJac3.chr17 C 0 I 4660 e mm10.chr16 32797625 4922 + 98207768 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=106224.000000 s hg38.chr3_KI270937v1_alt 77538 58 + 165607 ccagttgccaacacagctcttccaagtgtactttacttcctttcattcctgctctaaa s panTro4.chr3_GL389630_random 55618 58 - 103936 ccagttgccaacacggctcttccaagtgtactttacttcctttcattcctgttctaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2403958 58 - 202140232 ccagtggccaacacggctcttccaagtgtactttacttcctttcattcctgctctaaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192583513 58 + 192599291 ccagttgcccacgtggctcttccaagtgtactttacttcctttcattcctgctctaaa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192435214 58 - 192460366 ccagttgcccacgtggctcttccaagtgtactttacttcctttcattcctgctctaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187355180 58 + 187378091 CCAGTTGCCCACGTggctcttccaagtgtactttacttcctttcaatCCTGCTCTaaa i papAnu2.chr2 C 0 I 90 s chlSab2.chr15 91379075 58 + 91754291 ccagttgcccacgtggctcttccaagtgtactttacttcctttcattcctgctctaaa i chlSab2.chr15 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=-738.000000 s hg38.chr3_KI270937v1_alt 77596 12 + 165607 acttta-------------------------------------------------------------------------------tttatg s panTro4.chr3_GL389630_random 55676 12 - 103936 acttta-------------------------------------------------------------------------------tttatg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404016 12 - 202140232 acttta-------------------------------------------------------------------------------tttatg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192583571 91 + 192599291 actttattatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatttatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192435272 27 - 192460366 acttta----------------------------------------------------------------ttatttatttatttatttatt i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91379133 12 + 91754291 acttta-------------------------------------------------------------------------------tttatt i chlSab2.chr15 C 0 I 20 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e papAnu2.chr2 187355238 90 + 187378091 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=143009.000000 s hg38.chr3_KI270937v1_alt 77608 90 + 165607 tatttatttttgagacagaatcttgctc-tgtcgcctgggctggagtgcagtggcacaatcccagttcactgcaacctctgcctctgggat s panTro4.chr3_GL389630_random 55688 90 - 103936 tatttatttttgagacagaatcttgctc-tgtcgcctaggctggagtgcagtggcgcaatcccagttcactgcaacctctgcctctgggat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404028 90 - 202140232 tatttatttttgagacagagtcttgctc-tgttgcctaggctggagtgtagtggcacaatcccagttcactgcaacctctgcctctgggat i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192583662 90 + 192599291 tatttatttatgagacagagtcttgctc-cgtcacccaggctggagtgcagtggcacaatcccagttcactgcagtctctgcctctgggat i rheMac3.chr2 C 0 I 1 s macFas5.chr2 192435299 90 - 192460366 tatttatttatgagacagagtcttgctc-cgtcacccaggctggagtgcagtggcacaatcccagttcactgcagtctctgcctctgggat i macFas5.chr2 C 0 I 1 s papAnu2.chr2 187355328 91 + 187378091 tttgtttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacgatcttggctcactgcaacctccacctcctgggt i papAnu2.chr2 I 90 I 1148 s chlSab2.chr15 91379165 90 + 91754291 tatttatttatgagacagagtcttgctc-tgtcacccaggctggagtgcagcagcacaatcccagttcactgcagtctctgcctctaggat i chlSab2.chr15 I 20 I 1 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=639955.000000 s hg38.chr3_KI270937v1_alt 77698 565 + 165607 caggcaattctcctgcctcagcttcctaagcagctgggataacaggtgtgcaccaccgtgcttggctaa----ttttttttttcttttttcgtatttttagtagagatggggtttcaccatattagccatgatggtctcgtacttctgacctcaggtgatccacctgctttagccccccaaagtgctgggattacaggtgtgagccaccacgcccagccCTGGCCAACttttgttttttttgagacagagtttcattcttattgcccaggctggagtgcgatggcccaatcttgg-------------------------------------------------------ctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCTTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaagaatcaatgtatcagtatgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatcacctgctccatcctgagtcacccccagtcacctgctctaatctgagtcatcctgagtca s panTro4.chr3_GL389630_random 55778 562 - 103936 caggcgattctcctgcctcagcttcctaagcagctgggataacaggcgtgcaccaccgtgcttggctaa-----tttttttttcttttttcatatttttagtagagatggggtttcaccatattagccaggatggtctcgtacttctgacctcaggtgatccacctgctttagcctcccaaagtgctgggattacaggtgtgagccaccacgcccagccCTAGCCAACttttg-tttttttgagacagagtttcattcttattgcccaggctggagtgcgatggcccaatcttgg-------------------------------------------------------ctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatg-gttctgagatcctctccaaagagtcaatgtatcagtatgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatcacctgctccatcctgagtcacccccagtcacctgctctaatctgagtcatcctgagtca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404118 568 - 202140232 caggcgattctgctgcctcagcttcctgagctgctgggataacaggcgctcaccaccatgcttggctaattttttttttttttttttttttgtatttttagtagagatggggtttcaccatattagccaggatggtcctgtacttctgacctcaggtgatccgcctgctttagcctcccaaagtgctgggattacaggtgtgagccaccacacctggccCTAGCCAACttttg-tttttttgagacagagtttcattcttgttgcccaggctggagtgcaatggaccgaacttgg-------------------------------------------------------ctcactgcaacctctgcctcccaggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaagaatcaatgtatcagtatgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaaccaccccctcctagcctctatcacctgctccatcctgagtcacccccggtcacctgctctgatctgagtcatcctgagtca i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192583753 555 + 192599291 caagcaattctcctgcctcagcttcctgagct-ctgggataacaggcacgcaccacaatgcttggctaa-----tatatttttttgtgtgtgtatttttagtagagacggggtttcaccatattagccaggatggtcccatact------------cgatccacctgccccagcctcccaaagtgctgagattataggtgtgagccaccacgcccggcTCTAGCCAACttttg-tttttttgagatggagtttcattcttgttgcccagactggagtgc----------------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------------------AGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctctatcctgagtcacccctggtcacctgctctgacctgagtcatcctgagtca i rheMac3.chr2 I 1 I 963 s macFas5.chr2 192435390 546 - 192460366 caagcaattctcctgcctcagcttcctgagct-ctgggataacaggcacgcaccaccatgcttggctaa-----tatatttttttgtgtgtgtatttttagtagagacggggtttcaccatattagccaggatggtcccatact------------cgatccacctgccccagcctcccaaagtgctaagattataggtgtgagccaccacgcccggcTCTAGCCAACttttg-tttttttgagatggagtttcattcttgttgcccagactggagtgcaatggcacaatcttgg-------------------------------------------------------ctcactgcaacctccacctcctgggttTGTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcctctccaaa----cagtgtgtcagtacgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacccctggtcacctgctctgacctgagtcatcctgagtca i macFas5.chr2 I 1 C 0 s chlSab2.chr15 91379256 553 + 91754291 caagcgattctcctgcctcagcttcctgagct-ctgggataacaggcacgcaccaccatgcttggttaa-tttttttattttttattttttgtatttttagtagagacggggtttcaccatattagccaggatggtcccatact------------cgatccacctgccccagcctcccaaagtgctgagattatgggtgtcagcctccatgcctggcTCTAGCCAACttttg-tttctttgagatgcagtttcattcttgttgcccagactggagtgcaatggcacgatcttgg-------------------------------------------------------ctcactgcaacctccacctcctgggttTTTAGGATATAATAAATTCCTCTTCAAAGGTTTTAGCCTGTAAATtgttaagtacaatgagttctgagatcttctccaaacaatcagtgtgtcagtacgttcagctcttcattttaaagtttaacttcctcgttttcttcatctccttgcccctagtttcagtaaacaaccccctcctagcctctatctcctgctccatcctgagtcacccc-ggtcacctgctctgacctgagtcatcctgagtca i chlSab2.chr15 I 1 I 1966 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e papAnu2.chr2 187355419 1148 + 187378091 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1677.000000 s hg38.chr3_KI270937v1_alt 78263 4 + 165607 acag s panTro4.chr3_GL389630_random 56340 4 - 103936 acag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404686 4 - 202140232 acag i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192435936 4 - 192460366 ccag i macFas5.chr2 C 0 I 1142 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=29216.000000 s hg38.chr3_KI270937v1_alt 78267 110 + 165607 ggtttcaccatgttggccaagttggtctcgaactcctgacctcatgtgatccgcccacctcagcttcccaaagtgctgggattacaggcgtaagccatcgtgcctggccA s panTro4.chr3_GL389630_random 56344 110 - 103936 ggtttcaccatgttggccaagttggtctcgaactcctgacctcatgtgatccgcccacctcagcctcccaaagtgctgggattacaggtgtaagccatcgtgcctagccA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404690 110 - 202140232 ggtttcaccatattggccaggttggtctcgaattcctgacctcatgtgatccacccacctcagcctcccaaagtgcttggattacaggtgtaagccatcgtgcttggccA i ponAbe2.chr3 C 0 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e canFam3.chr33 2329403 5697 - 31377067 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=5409.000000 s hg38.chr3_KI270937v1_alt 78377 11 + 165607 GTTTTCACTTT s panTro4.chr3_GL389630_random 56454 11 - 103936 GTTTTCACTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404800 11 - 202140232 GTTTTCACTTT i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 2335100 11 - 31377067 GTTTCTACTTT i canFam3.chr33 I 5697 C 0 e mm10.chr16 32797625 4922 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=36504.000000 s hg38.chr3_KI270937v1_alt 78388 80 + 165607 AAAATGATCTCTAATACCAACTCTTGGGGTCCAAATGGGTCCCCACTGGTTTCAAATGCTGAGCATGCACAGATTATGTG s panTro4.chr3_GL389630_random 56465 80 - 103936 AAAATGATCTCTAATACCAACTCTTGGGGTCCGAATGGGTCCCCACTGGTTTCAAATGTTAAGCATGCACAGATTATGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404811 80 - 202140232 AAAATGATCTTTAATACCAATGCTTGGAGTCTGAATGGGTCCCCACTGGTTTCAAATGTTGAGCATGCACAGATTATGCG i ponAbe2.chr3 C 0 C 0 s mm10.chr16 32802547 80 + 98207768 AAAGAAACTCTTCATGCCAGCTGACAGGGTTCTGAGAGGATTCCACAAGTTCTGCATGTTGTGTGAGCACAGACAGTGTG i mm10.chr16 I 4922 I 218 s canFam3.chr33 2335111 77 - 31377067 -AAAATATCTTT-ATACCAACTC-TGAGGTCCGAACATGGCCCTACAAGTTCAAAATGTTGAGTATGCGCAGATGGTTTA i canFam3.chr33 C 0 C 0 e calJac3.chr17 73862344 4660 + 74750902 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=14596.000000 s hg38.chr3_KI270937v1_alt 78468 41 + 165607 GATGAGA-ACTTGCCAGGTGGGCTTACCGAAGGAGACGTGGT s panTro4.chr3_GL389630_random 56545 41 - 103936 GATGAGA-ACTTGCCAGGCGGGCTTACCGAAGGAGACGTGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404891 41 - 202140232 GATGAGA-ACTTGCCAGGTGGGCTTACCGAAGGAGACATGGT i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 2335188 42 - 31377067 AATGAGATGGTTTACATGCAGGGTCACCACAGAAGAGGTGGT i canFam3.chr33 C 0 C 0 e mm10.chr16 32802627 218 + 98207768 I e calJac3.chr17 73862344 4660 + 74750902 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=100410.000000 s hg38.chr3_KI270937v1_alt 78509 154 + 165607 AAGAATCGCCTACATTTGCCAGGCCCTGAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCACTTCttttttatgttgtaacctacatactgtaaactacg s panTro4.chr3_GL389630_random 56586 154 - 103936 AAGAATCGCCTACATTTGCCAGGCCCTCAGGACAGGCCCTCTCCACACCGAGGCTTATTTCCTTGGGTTGCAGAAGAGGAAACGCCAGGGAGCCCAGTATTCTTTGGTTCATTCGCTTCttttttatggtgtaacctacatactgtaaactacg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2404932 154 - 202140232 AAGAATCACCTACATTTGCCAGGCCCTGAGGACAGGCCCTCTCCACACCGATGCTTATTTCCTTGGGTTGCAGAAGAGGAAATGCCAGGGAGCCCAGTATTCTTTGGTTCATTCACttcctttttatggtgtaacctacatactgtaaactatg i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73867004 154 + 74750902 aagaaTCACCTAAATTTGCAAGGCCCCGAGAGCAGGTGCTCTCCACACCGAGGCTTATTTCCTCCGGTTGCAGAAGAGGAAGCACCAGGGAGCCCAGTATTCTTTGGCTCACTCACttctttcattatgtgtaacctacatagtataaactatg i calJac3.chr17 I 4660 I 1086 s canFam3.chr33 2335230 154 - 31377067 GAGAATCATCTAAATTTGCAAGGACCTGAGAATGGGCCTTCCCCAATCCTAACCCGTAGTCCTTGGGCTATAGTGTAGGAAACTCCAGGGAGCCCTCTGTCCATTCGTTCATTCAtctctttactagggcataacccacacactgcaaactaca i canFam3.chr33 C 0 C 0 e mm10.chr16 32802627 218 + 98207768 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=53193.000000 s hg38.chr3_KI270937v1_alt 78663 229 + 165607 cccagcttaagtagcgtataccctgatgaatttttatgtacgtatgtatccccaggatgtatccgacactcaggtcaagatacagaacgtgctcagcacctcaacaggtgcccttgtgttcccttccagtcaagcccccacttgccaccACAGAATGGAACAATCAtttttttttttttttttttttttttttttttttttttagagacagggtctcgctctgtctcca s panTro4.chr3_GL389630_random 56740 206 - 103936 cccagcttaagtagctcataccctgatgaatttttatgtacgtatgtatccccaggatgtatccgacactcaggtcaagatacagaatgtgctcagcacctcagcaggtgcccttgtgttcccttccagtcaagcccccacttgccaccACAGAATGGAACAAtc-----------------------tttttttttttttttagagacagggtcttgctctgtctcca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405086 205 - 202140232 cccagcttaagtagcatataccctgatgaatttttatgtatgtacatgtctccacgatgtatccaacactcagggcaagatacagaacgtgctcagcacct---caggtgcccttgtgtttccttccaggcaagcccccaTTTGCGACCACAGAATGGAACAAtc---------------------tttttttctttttttttagagacagggtctcgctctgtctcca i ponAbe2.chr3 C 0 C 0 s canFam3.chr33 2335384 137 - 31377067 tcaatcctaagtagcctacaacttaatgaattttta--cacgtgaatatacccaggagctagccaccactcag----agatagaagacactttccgtatctcaataggctccctcctattccc-tccagtcattctctc--------cccca----------------------------------------------------------------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32802627 218 + 98207768 I e calJac3.chr17 73867158 1086 + 74750902 I e chlSab2.chr15 91379809 1966 + 91754291 I e papAnu2.chr2 187355419 1148 + 187378091 I e macFas5.chr2 192435940 1142 - 192460366 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=6119.000000 s hg38.chr3_KI270937v1_alt 78892 19 + 165607 aagctggagtgca---gctcca s panTro4.chr3_GL389630_random 56946 19 - 103936 aagctggagtgca---gctcca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405291 22 - 202140232 aagctggagtgcagtggtgcca i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192437082 19 - 192460366 aagctggagtgca---gtggtg i macFas5.chr2 I 1142 I 3 s papAnu2.chr2 187356567 19 + 187378091 aagctggagtgca---gcggtg i papAnu2.chr2 I 1148 I 3 s canFam3.chr33 2335521 3 - 31377067 aaa------------------- i canFam3.chr33 C 0 C 0 e mm10.chr16 32802627 218 + 98207768 I e calJac3.chr17 73867158 1086 + 74750902 I e chlSab2.chr15 91379809 1966 + 91754291 I e rheMac3.chr2 192584308 963 + 192599291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=126664.000000 s hg38.chr3_KI270937v1_alt 78911 72 + 165607 tcatggttcactgcagcctccgcctcctgggtttgagcgatcctcccatttcagTgtaaccaccattcttat s panTro4.chr3_GL389630_random 56965 72 - 103936 tcatgcttcactgcagcctccgcctcccgggtttgagcgatcctcccatttcagTgtaaccaccattcttat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405313 72 - 202140232 tcatggttcattgcagcctccacctcctgggttcgagcgatcctcccatttcagTgtaaccaccattcttat i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585271 72 + 192599291 tcatggttcactgcagcctccgcctcccgggttcgagcgatcctcccatttcaCTgtaaccaccattcttat i rheMac3.chr2 I 963 C 0 s macFas5.chr2 192437104 72 - 192460366 tcatggttcactgcagcctccgcctcccgggttcgagcgatcctcccatttcaCTgtaaccaccattcttat i macFas5.chr2 I 3 C 0 s papAnu2.chr2 187356589 72 + 187378091 tcatggttcactgcagcctccgcctcccgggttcgagcgatcctcccatttcagtgTAACCACCATTTTTAC i papAnu2.chr2 I 3 C 0 s chlSab2.chr15 91381775 72 + 91754291 tcacggttcactgcagcctccgcctcccgggttcgagcgatcctcccatttcagTgtaaccaccattcttat i chlSab2.chr15 I 1966 C 0 s canFam3.chr33 2335524 11 - 31377067 -------------------------------------------------------------atcattcttgc i canFam3.chr33 C 0 C 0 e mm10.chr16 32802627 218 + 98207768 I e calJac3.chr17 73867158 1086 + 74750902 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=199967.000000 s hg38.chr3_KI270937v1_alt 78983 95 + 165607 ctctatcaccatagattagctctgcatgtctttgaacttcatataaatggaatcatgcatagataggctcttttgtgtctggattctctctgtta s panTro4.chr3_GL389630_random 57037 95 - 103936 ctctatcaccatagattagctctgcatgtctttgaacttcatataaatggaatcatgcatagataggctcttttgtgtctggattctctctgtta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405385 93 - 202140232 ctctatcaccatagattagctctgcatgtctttgaacttcatataaatggaatcatgcatatacaggctcttttgtgtctggat--tctctgtta i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585343 92 + 192599291 ct---tcaccatagattagctctgcctgtctttgagcttcatgtaaatggaatcatgcatatataggctcttttgtgtctggattctctctgtta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192437176 92 - 192460366 ct---tcaccatagattagctctgcctgtctttgagcttcatgtaaatggaatcatgcatatataggctcttttgtgtctggattctctctgtta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187356661 93 + 187378091 CG--ATCACCATAGATTAGCTCTGCCTGTCTTTGAACTTcgtgtaaatggaatcatgcataTATAGgctcttttgtgtctggattcTCTCTGTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91381847 92 + 91754291 ct---tcaccatagattagctctgcctgtctttgagcttcatgtaaatggaatcatgcagatataggctcttttgtgtctggattctctctgtta i chlSab2.chr15 C 0 C 0 s mm10.chr16 32802845 79 + 98207768 Ctctgccaccatggac------------acattcaggactatgtgaataggattgtgcgtgc----gcttttcagtatttggcttcttacatgta i mm10.chr16 I 218 C 0 s canFam3.chr33 2335535 93 - 31377067 ctctatcaccatgggttagttctgcctatttctgaacttcatataaatggaattaggattccata--ctctttcgtgtctggcttctttttctta i canFam3.chr33 C 0 C 0 e calJac3.chr17 73867158 1086 + 74750902 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=347707.000000 s hg38.chr3_KI270937v1_alt 79078 134 + 165607 acactgtgtctg-tgagactcactcacgctgt---gtgtagt-attatgcttcatccttttttgttgttgcatagtattccactgtataaa-tataccacaatttatttgtctgttttccaattgctgtgcatttggatt s panTro4.chr3_GL389630_random 57132 134 - 103936 acactgtgtctg-tgagactcactcacgctgt---gtgtagt-attatgcttcatccttttttgttgtcgcatagtattccactgtataaa-tataccacaatttatttgtctgttttccaattgctgtgcatttggatt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405478 134 - 202140232 acactgtgtctg-tgagactcactcatgctgt---gtgtagt-attatgcttcatccttttttgtcgttgcatattattccattgtataaa-tataccacaatttatttgtccattttccaattgctgagcatttggatt i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585435 133 + 192599291 acactgtgtctg-tgagactcactcacgctgt---gtgtagt-gttatacttcatcc-tttttgttgttgcacagtattccattgtataaa-tataccacaatttatttacccattttccaattgctgggcatttggatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192437268 133 - 192460366 acactgtgtctg-tgagactcactcacgctgt---gtgtagt-gttatacttcatcc-tttttgttgttgcacagtattccattgtataaa-tataccacaatttatttacccattttccaattgctgggcatttggatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187356754 133 + 187378091 ACACTGTGTCTG-TGAGACTCACTCACGCTGT---GTGTAGT-GTTATACTTCATCC-TTTTTGTTGTTGcacagtatttcattgtataaa-tataccacaatttatttacccattttcCAATTGctgggcatttggatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91381939 129 + 91754291 acactgtgtctg-tgagactcactcacactgt---gtgtggt-gttatacttcatcc-tttttgttgttgcacagtattccattgtataaa-tataccacaatttat----ccattttgcaattgctgggcatttggatt i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73868244 131 + 74750902 acattgtatctattgaaac---atcatgatgt---TTA-AGT-ATTTtacttcatctgtttttgtctttgggtagtattccattgcataaa-tgtaacacaatttatttgtccattttcctattgctgggcatttggatt i calJac3.chr17 I 1086 C 0 s mm10.chr16 32802924 135 + 98207768 acattctgtctg-tgaggttcaccagagctcttacgtataataataatgctttatcc---ttagatggcgggtggttttcctttggaatta-tcaaccacaacttctgtggccattttcttattgatggatgtttgggtt i mm10.chr16 C 0 I 43 s canFam3.chr33 2335628 130 - 31377067 acattatgcctg-tgaaactcccctgtgttgt---gtgtagc-a--gtactccattcttgtttgctgttagatactattccattgtagaaagtat---acaatttatttctccatgttcctattgatggacacttgtatc i canFam3.chr33 C 0 C 0 e nomLeu3.chr11 2859940 8064 - 123690457 I a score=185999.000000 s hg38.chr3_KI270937v1_alt 79212 65 + 165607 gtttt--gtttttcactattttgaataaagctgctatgaacatccttgtatatgtcttGGGTATAca s panTro4.chr3_GL389630_random 57266 65 - 103936 gtttt--gtttttcactattttgaataaagctgctatgaacatccttgtatatgtcttGGGTATAca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405612 65 - 202140232 gtttt--gtttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATAca i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585568 65 + 192599291 gtttt--gtttttcactattttgagtaaagctgctatgaacattcttgtatatgtcttGGGTATAca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192437401 65 - 192460366 gtttt--gtttttcactattttgaataaagctgctatgaacattcttgtatatgtcttGGGTATACA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187356887 65 + 187378091 gtttt--gtttttcactattttgaataaagctgctatgaacattcttgtatatgTCTTGGGTATACA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382068 65 + 91754291 gtttt--gtctttcactattttgaataaagctgctatggacattcttatatatgtcttGGGTATACA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73868375 65 + 74750902 atttt--ggttttcactattttgaataaagctgctatgaacgttcttgcatgtatcttggGTGTAca i calJac3.chr17 C 0 C 0 s canFam3.chr33 2335758 67 - 31377067 atttccagtttttcactattcgaaagaaagctgctaggaatagtctcgcatacgctttgggtataca i canFam3.chr33 C 0 I 2307 e mm10.chr16 32803059 43 + 98207768 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=59263.000000 s hg38.chr3_KI270937v1_alt 79277 26 + 165607 gatggtcctggcttacaatgattgga s panTro4.chr3_GL389630_random 57331 26 - 103936 gatggtcccggcttacaatgattgga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405677 26 - 202140232 gatggtcccggcttacagtgatttga i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585633 26 + 192599291 gacggtcccggtttacaatgatttga i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192437466 26 - 192460366 GACGGTCCCGGTTTACAATGATTTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187356952 26 + 187378091 GATGGTCCCGGTTTACAATgatttga i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382133 26 + 91754291 GACGGTCCCGGTTTACAATGATTTGA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73868440 26 + 74750902 gatggtcccaacttacaatgatttga i calJac3.chr17 C 0 C 0 e mm10.chr16 32803059 43 + 98207768 I e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=1498311.000000 s hg38.chr3_KI270937v1_alt 79303 665 + 165607 tttaaaa-ttgtttgactttatgatggGCTTATCAGGgtattaaatgtgtttctgacttacagtatttttgacttaccacgtgtttattgggacgtaaccccttcctaaga--------tgaagagcatctgTATACATCCAGAATcctgtggagcaactcataacccatgaggaatggaagccgacagacagactcatccccaggacagatggttctca-ctacatctcataaagcttcttagaagatcttacaggattgagcaaccagccagccacagcaggggccaactggataacacgtctttgcacaggctctccctctgtccctgt-----c-accctccccttttcctaaccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCCAAAGCTGACCCATTAGCCAATAGCTAGGTTCTGTGATGACAGAGCTTCTGGGCTATAATCGTTTACTGAGAAGCCAGCGTTC-------------------CTGAGG---------GGATAATGGCTCGTTCCATTCAgctgcagcataggagtg----agggcagggcattagcagaagataacaccagaaacgtgctctgggg-cctgttgatgactttctgtgccaagcgtagacatttagcctttattctgtatgtgatgggaagccagtgccagtggtgg-gtttgagcagggaaCCAGCA s panTro4.chr3_GL389630_random 57357 665 - 103936 tttaaaa-ttgtttgactttacgatgggcttatcagggtattaaatgtgtttctgacttacagtatttttgacttaccacgtgtttattgggacgtaaacccttcctaaga--------tgaagaacatctgTATACATCCAGAATcctgtggagcaactcataacccatgaggaatgggagccgacagacagactcatccccaggacaggtggttctca-ctacatctcagaaagcttcttagaagatcttacaggatcgtgcaaccagccagccacagcaggggccgactggataacatgtctttgcacaggctctccctctgtccctgt-----c-accctccccttttcctaaccttgttccttgggattatgttttgaaataagttaTTCAGAGAAATGAAGCTAAAGCTGACCCATTAGCCAATAGCTAGGTTCTGTGATGACAGGGCTTCTGGGCTATAATCGTTTACTGAGAAGCCAGCGTTC-------------------CCGAGG---------GGATAATGGCTCGTTCCATTCAgctgcagcataggagtg----agggcagggcattagcagaagataacaccagaaacgtgctctgggg-cctgtttatgactttctatgccaagcgtagatatttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcagggaaCCAGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2405703 665 - 202140232 cttaaaa-gtttttgactttatgatgggcttatcagggtattaaatgtgtttctgacttacagtatttttgacttaccacatgtttattgggatgtaaccccttcctaaga--------tgaggaacatctgTATACATCCAGAATCCTGTGGAGCAACTCATAACCCATGAGGAATGGGAGGCGACAGACAGACTCA-CCCCAGGACAGATGGTTCTCA-CTACATCTCATAAAgcttcttagaagatcttacaggatcggtcaaccagccagccacagcaggggctgaatggataacacatctttgcacgggctctccctctgtccctgt-----ctcccctccccttttcctaaccttgttccttgggattatgttttgaaataaattGTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGATGACAGGGCTTCTGGGCTATAATCATTTACTGAGAAGCCAGTGTTC-------------------CCGAGG---------GGATAATGGCTCATTCCATTTAGCTGCAGCATAGGAGTG----GGTGCAGGGCATTAGCAGAAGATAACACTAGAAATGTGCCCTGGGG-CCTGTTGATGACTTTCTGTGCCAAGCGTAGGCATTTAGCCTTTATTCTGTAGATGATGGGAAGCCAGTGCCAGTGGTGG-GTTTGAGCAGGGAACCAGCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192585659 632 + 192599291 cttaaaa-ttttttgactttatgatgggcttatcagggtattaaatgtgtttctgacttacagtatttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatTCGTATATATCCAGAATcctgtggagcaactcgtaacccatgaggactgggagcc----gacagattcatccccaggacagatggttctca-atacatctcataaagcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggctctccctctgttcctgt-----ctcccctccccttttcctaaccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCTGACAGGGTTTCCGGGCTATAATCATTTACAGAGAAGCCAGTGTTC-------------------CCGAGG---------GGATAATGGCTCTTTCCATTCAGCTACCGCATGggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgttgatgactttctgtgccaagtgtaggcatttagcctttattctgtaggtgatgggaagccagtg------------------------------- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192437492 632 - 192460366 CTTAAAA-TTTTTTGACTTTATGATGGGCTTATCAGGgtattaaatgtgtttctgacttacagtatttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatTCGTATATATCCAGAATCCTGTGGAGCAACTCGTAACCCATGAGGACTGGGAGCT----GACAGATTCATCCCCAGGACAGATGGTTCTCA-ATACATCTCATAAAgcttcttagaagatcttacaggatcgcacaaccagtcagccacagcaggggccgactggataacacggctttgcacgggctctccctctgtccctgt-----ctcccctccccttttcctaaccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCTGACAGGGTTTCCGGGCTATAATCATTTACAGAGAAGCCAGTGTTC-------------------CCGAGG---------GGATAATGGCTCTTTCCATTCAGCTACCGCATGggagtg----ggtgcagggcattagcagaagataaggccagaaatgggcactgggg-cctgttgatgactttctgtgccaagtgtaggcatttagcctttattctgtaggtgatgggaagccagtg------------------------------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187356978 636 + 187378091 cttaaaa-ttttttgactttatgatgggcTTATCAGGGTATTAAATGTGTTTCTGACTTACAGTATTTTTGACTTACCAAGTGTTTATTGGGGCGTAACCCCTTCCTCAGA--------TGAGGAACATCTGTATATATCCAGAATCCTGTGGAGCAACTCATAACCCATGAGGACTGGGAGCCGACAGACAGATTCATCCCCAGGACAGATGGTTCTCA-ATACATCTCATAAAGCTTCTTAGAAGATCTTATAGGATCGCACAACCAGTCAGCCACAGCAGGGGCCGACTGGATAACACGGCTTTGCACGGGctctccctctgtccctgt-----ctcccctccccttttcctAACCTTATTCCTTGGGATTATGTTTTGAAACAAATTATTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCCGACAGGGTTTCCGGGCTATAATCATTTACGGAGAAGCCCGTGTTC-------------------CCGAGG---------GGATAATGGCTCTTTCCATTCGGCTACCGCATGGGAGTG----GGTGCAGGGCATTAGCAGAAGATAAGGCCAGAAATGGGCACTGGGG-CCTGTTGATGACTTTCTGTGCCAAGTGTAGGCATTTAGCCTTTATTCTGTAGGTGATGGGAAGCCAGTG------------------------------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382159 660 + 91754291 CTTAAAA-TTTTTTGACTTTATGATGGGCTTATCAGGgtattaaatgtgtttctgacttacagtatttttgacttaccaagtgtttattgggacgtaaccccttcctcaga--------tgaggaacatctgTATATATCCAGAATCCTGTGGAGCAACTCGTAACCCGTGAGGACTGGGAGCC----GACAGAGTCATCCCCAGGACAGATGGTTCTCA-ATACATCTCATAAAgcttcttagaagatcttacaggatcgcacaaccagtgagccacagcaggggccgactggataacacggctttgcacgggctctccctctgtccctgt-----ctcccctccccttttcctaaccttgttccttgggattatgttttgaaataaattaTTCAGAGAAATGAAGCTAAAGCTGACCAATTAGCCAATAGCTGGGTTCTGTGCCGACAGGGTT--CTGGCTATAATCATTTACTGAGAAGCCGGTGTTC-------------------CCGAGG---------GGATAACGGCTCTTTCCATTCGCCTACCGCATAggagtg----ggtgcggggcattagcagatgataaggccagaaatgggcactgggg-cctgttgatgactttctgtgccaagtgtaggcatttagcctttattctgtaggtgatgggaagccagtgccagtggtgg-gtttgagcaggaaactagca i chlSab2.chr15 C 0 I 28 s calJac3.chr17 73868466 657 + 74750902 cttaaaatttttttgactttacgatgggcttatcagAggcttacatg------------------tttctgacttaccacttgtttatcgggacataaccccttcctaagacgaggaacCGAGGAACATCTGTATGTATCCAGAATcctgtgcagcaactcgtaactcatgaggaatgggagcc----gacagattcattcccaggacagacggttctcagatacatctcagaaagcttcttagaagatcgtacaggatcaagcaaccagccagccagagcaggggccaactggataacacatctctgcacgggctctccctctgtccctgttctaaccttgctctccttttcctaaccttgctc--tgagattatgttccaaaataaattaTTCAGAGAAATGGAGCTAAAGCTGACCCATTAGCCAATGGCTGCGTCCTGCGCTGACCGGGCTTCTGTGCTATAAACATTTACTGAGAAACCAGCGTTC-------------------Ctttgg---------ggaaaatgg-tcattccattcagctgcagcataggaagggggtggggcaggggattagcaggagataagaccagaaatgtgcactggggccCTGTTGGGGA----CTGCGCCAAGCGTAGGCGTTCAGCCTTTCTTCTGTAGATGATGGGAAGCCAGTTCCAGTGGTGG-GTTTGAGCAGGAAACCAGCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32803102 588 + 98207768 CTTAAAG-TT-----------------GTTAATCACTCTATTACATATGTTTTTAA--------------------------------------------------------------------------TATATATTTCCAAGACTCTGTAGGCCAACTTGTAGTCCATG-GGAAAGGAGACAGGCACACTGATCTGTTACCA-GATAGATGCCtttcagacacattccccaaggtctcttagaagatcccacagg-cgaagcaactagccagccacagctagagccgactggagggtaggtctttgtgctggccctccctccatccctgt-----t-ttatttgccttactctaatcccat----tggagttatgttcctaaataaattccttAGAGAAATTAAGCCAACACAAAACCATTAGCCAAGAGCTGGGCTCTGGGCCAACAGGGAT-CCTTGCTGCAATCAGTTGCCCAGAAACAAGGGTTCAGATTAGCAAAGGCCCAGACCAAGGCTTGGGTGAGGAGAATGGGGGATCCTGTTCAGCTGCA-CCCAAGAGTG----GGTGAGGGGGATTAGCAGG-GATAAAGCTGGAGGTCTGCA---GAG-CTTGGTGGTGGC-----AGGCCAGACCCAGTACTTTCACATCTAGTCTGTCGAGAATGGGAAGCCATTG------ATGGCCTCTCAACAGGGAGCTGGCT i mm10.chr16 I 43 C 0 e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=4020.000000 s hg38.chr3_KI270937v1_alt 79968 3 + 165607 ACC s panTro4.chr3_GL389630_random 58022 3 - 103936 ACC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406368 3 - 202140232 ACC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192586291 2 + 192599291 -cc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438124 2 - 192460366 -cc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357614 2 + 187378091 -CC i papAnu2.chr2 C 0 C 0 s mm10.chr16 32803690 3 + 98207768 GCC i mm10.chr16 C 0 I 1021 e calJac3.chr17 73869123 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=80760.000000 s hg38.chr3_KI270937v1_alt 79971 57 + 165607 AGTGGTGGGTTTGAGCAGGGAACCAGCAATACTCAAGCTCTGCTTGGATGGAGGCCA s panTro4.chr3_GL389630_random 58025 57 - 103936 AGTGGTGGGTTTGAGCAGGGAACCAGCAATACTCAAGCTCTGCTAGGATGGAGGCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406371 57 - 202140232 AGTGGTGGGTTTGAGTAGGGAACCAGCAATCCTCAAGCTCTGCTTGGACGGAGGCCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192586293 57 + 192599291 agtggtgggtttgagcagggaactagcaatactcaagctctgcttggacagaggcca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438126 57 - 192460366 agtggtgggtttgagcagggaactagcaATACTCAAGCTCTGCTTGGACAGAGGCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357616 57 + 187378091 AGTGGTGGGTTTGAGCAGGGAACTAGCAATACTCAAGCTCCACTTGGACAGAGGCCA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73869123 29 + 74750902 ----------------------------GTACCAGAGCTCTGCTTGGGCGGAGGCCA i calJac3.chr17 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e nomLeu3.chr11 2859940 8064 - 123690457 I a score=46333.000000 s hg38.chr3_KI270937v1_alt 80028 19 + 165607 GTCAGGGAGGAGTTAGGGC s panTro4.chr3_GL389630_random 58082 19 - 103936 GTCAGGGAGGAGTTAGGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406428 19 - 202140232 GTCAGGGAGGAGTTAAGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868004 19 - 123690457 GTCAGGGAGGAGTTAGGGT i nomLeu3.chr11 I 8064 C 0 s rheMac3.chr2 192586350 19 + 192599291 gtcagggaggagttagggc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438183 19 - 192460366 GTCAGGGAGGAGTTAGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357673 19 + 187378091 GTcagggaggagttagggc i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73869152 19 + 74750902 GCAAGGGAAGAGTTAGGGC i calJac3.chr17 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I a score=14176.000000 s hg38.chr3_KI270937v1_alt 80047 10 + 165607 AGGAGGACCA s panTro4.chr3_GL389630_random 58101 10 - 103936 AGGAGGACCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406447 10 - 202140232 TGGAGGATCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868023 10 - 123690457 AGGACGACCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586369 10 + 192599291 agggggacca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438202 10 - 192460366 AGGGGGACCA i macFas5.chr2 C 0 T 29 s papAnu2.chr2 187357692 10 + 187378091 agggggaccg i papAnu2.chr2 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I a score=2910.000000 s hg38.chr3_KI270937v1_alt 80057 3 + 165607 GTC s panTro4.chr3_GL389630_random 58111 3 - 103936 GTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868033 3 - 123690457 GTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586379 3 + 192599291 gtc i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 187357702 3 + 187378091 gtc i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e macFas5.chr2 192438212 29 - 192460366 T a score=546.000000 s hg38.chr3_KI270937v1_alt 80060 1 + 165607 A s panTro4.chr3_GL389630_random 58114 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868036 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586382 1 + 192599291 a i rheMac3.chr2 C 0 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T a score=2346.000000 s hg38.chr3_KI270937v1_alt 80061 8 + 165607 GGGAGGAG s panTro4.chr3_GL389630_random 58115 8 - 103936 GGGAGGAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868037 8 - 123690457 GGGAGGAG i nomLeu3.chr11 C 0 I 29 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=191.000000 s hg38.chr3_KI270937v1_alt 80069 2 + 165607 AC s panTro4.chr3_GL389630_random 58123 2 - 103936 AC i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C e nomLeu3.chr11 2868045 29 - 123690457 I a score=7474.000000 s hg38.chr3_KI270937v1_alt 80071 29 + 165607 TTAGGGCAGGAGGACCACTCAGGGAGGAG s panTro4.chr3_GL389630_random 58125 29 - 103936 TTAGGGCAGGAGGACCGGTCAGGGAGGAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868074 29 - 123690457 TTAGGGCAGGGGGACCGGTCAGGGAGGAG i nomLeu3.chr11 I 29 T 58 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=191.000000 s hg38.chr3_KI270937v1_alt 80100 2 + 165607 AC s panTro4.chr3_GL389630_random 58154 2 - 103936 AC i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C e nomLeu3.chr11 2868103 58 - 123690457 T a score=4022.000000 s hg38.chr3_KI270937v1_alt 80102 17 + 165607 TTAGGGCAGGAGGACGG s panTro4.chr3_GL389630_random 58156 17 - 103936 Tcagggcaggaggacag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868045 17 - 123690457 TTAGGGCAGGAGGCCGG i nomLeu3.chr11 T 58 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438212 29 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=37161.000000 s hg38.chr3_KI270937v1_alt 80119 87 + 165607 GTCAGGGAGGAG--TTAGGGCAGGAGGACAGGTCAGGGAGGAG--TTAGGGGAGGAGGACTGGTCAGGGAGGAGTTAGGGCAGGAGGACGG s panTro4.chr3_GL389630_random 58173 91 - 103936 gtcagggaggagactcagggcaggaggacaggtcagggaggagacttagggcaggaggaccagtcagggaggagttagggctagaggactg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868062 87 - 123690457 GTCAGGGAGGAG--TTAGGGCAGGGGGACCGGTCAGGGAGGAG--TTAGGGCAGGGGGCCGGGTCAGGGATGAGTTAGGGTAGGAGGACCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438183 87 - 192460366 GTCAGGGAGGAG--TTAGGGCAGGGGGACCAGTCCGGGAGGAG--CTAGGGCAGGGGGACCGGTCGGGGAGGAGCTAGGGCAGGGGGACCG i macFas5.chr2 T 29 C 0 e ponAbe2.chr3 2406457 0 - 202140232 C e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=31995.000000 s hg38.chr3_KI270937v1_alt 80206 38 + 165607 GTCAGGGAGGAGTTAGGGCAGGAGGACAGGTCAGGGAG s panTro4.chr3_GL389630_random 58264 38 - 103936 gtcagggaggagttagggcagggggaccggtcagggag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406457 38 - 202140232 GTCAGGGAGGAGTTAGGGCAGGAGGACAAGTCAGGGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868149 38 - 123690457 GTCAGGGAGGAGTTAGGGCAGGGGGACCAGTCAGGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438270 38 - 192460366 GTCGGGGAGGAGTTAGGGCAGGGGGACCAGTTAGGAGG i macFas5.chr2 C 0 T 29 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=9640.000000 s hg38.chr3_KI270937v1_alt 80244 10 + 165607 GAGTTAGGGC s panTro4.chr3_GL389630_random 58302 10 - 103936 gagttagggc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406495 10 - 202140232 GAGTTAGGGC i ponAbe2.chr3 C 0 T 77 s nomLeu3.chr11 2868187 10 - 123690457 GAGTTAGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438279 10 - 192460366 GAGTTAGGGC i macFas5.chr2 T 29 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=9231.000000 s hg38.chr3_KI270937v1_alt 80254 31 + 165607 TGGAGGACGGGTCAGGGAG--GAGACTTAGGGC s panTro4.chr3_GL389630_random 58312 29 - 103936 aggaggacaggtcagggAG--GAG--TTAGGGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868197 31 - 123690457 AGGGGGACCGGTCAGGGAG--GAGACTTAGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438289 33 - 192460366 AGGGGGACCAGTTAGGAGGCCGTGACCCAGGAC i macFas5.chr2 C 0 T 144 e ponAbe2.chr3 2406505 77 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=19.000000 s hg38.chr3_KI270937v1_alt 80285 36 + 165607 AGGAGGACTGGTCAGGGAGGAGACTTAGGGCAGGAG s panTro4.chr3_GL389630_random 58341 34 - 103936 ATGGGGATTGGTCAGGGAGGAG--TTACggcaggag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868228 6 - 123690457 AGGAGG------------------------------ i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2406505 77 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438322 144 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=18653.000000 s hg38.chr3_KI270937v1_alt 80321 88 + 165607 GACTGGTCAGGGAGGAGTTAGGGGAGGAGGACGGGTCAGGGAGGAGTTAGGGCTGGAGGACTGGTCAGGGAGGAGA-TTAGGGCAGGAG s panTro4.chr3_GL389630_random 58375 89 - 103936 gacaggtcagggaggagttagggcagggggactggtcagggaggagttagggcaggaggacaggtcagggaggagacttagggcaggag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868234 32 - 123690457 --CCAGTCAGGGAGGAGTTAGGGCAGGGGG------------------------------CTGG------------------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438178 87 - 192460366 GGCCAGTCAGGGAGGAGTTAGGGCAGGGGGACCAGTCCGGGAGGAGCTAGGGCAGGGGGACCGGTCGGGGAGGAG--CTAGGGCAGGGG i macFas5.chr2 T 144 T 87 e ponAbe2.chr3 2406505 77 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=539.000000 s hg38.chr3_KI270937v1_alt 80409 5 + 165607 GACCG s panTro4.chr3_GL389630_random 58464 5 - 103936 gacag i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192438178 5 - 192460366 GGCCA i macFas5.chr2 T 87 C 0 e ponAbe2.chr3 2406505 77 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C e nomLeu3.chr11 2868266 0 - 123690457 C a score=65161.000000 s hg38.chr3_KI270937v1_alt 80414 82 + 165607 GTCAGGGAGGAGTTAGGGCTGGAGGACGGGTCAGGGAGGAGTTAGGGCTGGAGGACGGGTCAGGGAGGAGTTAGGGCAGGAG s panTro4.chr3_GL389630_random 58469 82 - 103936 gtcagggaggagttagggcaggaggacgggtcagggaggagttagggcaggaggaccggtcagggAGGAGTTAGGGCTAGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406428 82 - 202140232 GTCAGGGAGGAGTTAAGGCTGGAGGATCAGTCAGGGAGGAGTTAGGGCAGGAGGACAAGTCAGGGAGGAGTTAGGGCAGGAG i ponAbe2.chr3 T 77 C 0 s nomLeu3.chr11 2868266 82 - 123690457 GTCAGGGAGGAGTTAGGGCAGGGGGCTGGGTCAGGGAGGAGTTAGGGCAGGGGGACCGGTCAGGGAGGAGTTAGGGCAGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438183 82 - 192460366 GTCAGGGAGGAGTTAGGGCAGGGGGACCAGTCCGGGAGGAGCTAGGGCAGGGGGACCGGTCGGGGAGGAGCTAGGGCAGGGG i macFas5.chr2 C 0 T 87 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=1953.000000 s hg38.chr3_KI270937v1_alt 80496 4 + 165607 GACC s panTro4.chr3_GL389630_random 58551 4 - 103936 GATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406510 4 - 202140232 GACC i ponAbe2.chr3 C 0 T 86 s nomLeu3.chr11 2868348 4 - 123690457 GACC i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438265 87 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=6310.000000 s hg38.chr3_KI270937v1_alt 80500 25 + 165607 GGTCAGGGAGGAGTTAGGGGAGGAG s panTro4.chr3_GL389630_random 58555 25 - 103936 GGTCAGGGAGGAGTTAGAGCAGGGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868352 25 - 123690457 GGTCAGGGAGGAGTTAGGGCAGGGG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2406514 86 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438265 87 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=11471.000000 s hg38.chr3_KI270937v1_alt 80525 34 + 165607 GACTGGTCAGGGAGGAG--TTAGGGCTGGAGGACGG s panTro4.chr3_GL389630_random 58580 34 - 103936 GACTGGTCAGGGAGGAG--TTAGGGCAGGAAAATCG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868377 35 - 123690457 GACCGGTCAGGGAGGAGACTTAGGGCAGGAGGCCA- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438178 34 - 192460366 GGCCAGTCAGGGAGGAG--TTAGGGCAGGGGGACCA i macFas5.chr2 T 87 C 0 e ponAbe2.chr3 2406514 86 - 202140232 T e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=18339.000000 s hg38.chr3_KI270937v1_alt 80559 24 + 165607 GTCAGGGAGGAGTTAGGGCTGGAG s panTro4.chr3_GL389630_random 58614 24 - 103936 GTCAGGGAGAAGTCAGGGCAGGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406428 24 - 202140232 GTCAGGGAGGAGTTAAGGCTGGAG i ponAbe2.chr3 T 86 C 0 s nomLeu3.chr11 2868412 24 - 123690457 GTCAGGGAGGAGTTAGGGCAGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438212 24 - 192460366 GTCCGGGAGGAGCTAGGGCAGGGG i macFas5.chr2 C 0 T 24 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=481.000000 s hg38.chr3_KI270937v1_alt 80583 5 + 165607 GACTG s panTro4.chr3_GL389630_random 58638 5 - 103936 GACTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406452 5 - 202140232 GATCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868436 5 - 123690457 GCTGG i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438236 24 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=19745.000000 s hg38.chr3_KI270937v1_alt 80588 29 + 165607 GTCAGGGAGGAGTTAGGGCAGGAGGACCG s panTro4.chr3_GL389630_random 58643 28 - 103936 GTCAGAGAGGAGTTAGGGTAGGAGG-CCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2406457 29 - 202140232 GTCAGGGAGGAGTTAGGGCAGGAGGACAA i ponAbe2.chr3 C 0 I 19 s nomLeu3.chr11 2868441 29 - 123690457 GTCAGGGAGGAGTTAGGGCAGGGGGCTTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438212 29 - 192460366 GTCCGGGAGGAGCTAGGGCAGGGGGACCG i macFas5.chr2 T 24 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=22876.000000 s hg38.chr3_KI270937v1_alt 80617 48 + 165607 GTCAGGGAGGAGTT-AGGGCAGGAGGACCGGTCAGGGAGGAG--TTAGGGC s panTro4.chr3_GL389630_random 58671 51 - 103936 GTCAGGGAGGAGTTAAGGGTAGGAGGACCGGTCAGGGAGGAGACTCAGGGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868470 48 - 123690457 GTCAGGGAGGAGTT-AGGGCAGGGGGACCGGTCAGGGAGGAG--TTAGGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438241 48 - 192460366 GTCGGGGAGGAGCT-AGGGCAGGGGGACCGGTCGGGGAGGAG--TTAGGGC i macFas5.chr2 C 0 T 29 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=17289.000000 s hg38.chr3_KI270937v1_alt 80665 48 + 165607 AGGAGGACCGGTCAGGGAGGAG-TTAGGGCTGGAGGACGGGTCAGGGAG s panTro4.chr3_GL389630_random 58722 49 - 103936 AGGAAGACGGGTCAGGGAGGAGACTTgggcaggaggaccagtcagggag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868518 47 - 123690457 AGGAGG-CCAGTCAGGGAGGAG-TTAGGACTGGAGGATGGGTCAGGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438260 48 - 192460366 AGGGGGACCGGTCGGGGAGGAG-TTAGGGCAGGGGGACCAGTTAGGAGG i macFas5.chr2 T 29 T 29 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=13768.000000 s hg38.chr3_KI270937v1_alt 80713 29 + 165607 GAGTTAGGGGAGGAGGACCGGTCAGGGAG s panTro4.chr3_GL389630_random 58771 29 - 103936 gagttagggcaggaggaccggtcagggag i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868565 29 - 123690457 GAGTTAGGGCAGGGGGACTGGTCAGGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438279 29 - 192460366 GAGTTAGGGCAGGGGGACCAGTTAGGAGG i macFas5.chr2 T 29 T 57 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=13192.000000 s hg38.chr3_KI270937v1_alt 80742 57 + 165607 GAGTTAGGGCAGTAGGACGGGTCAGGGAGGAG--TTAGGGCAGGAGGACCGGTC--GGAGG s panTro4.chr3_GL389630_random 58800 61 - 103936 gagttagggcaggaggactggtcagggaggagacttagggcaggaggaccagtcagggagg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868594 59 - 123690457 GAGTTAGGGCAGGGGGACAGGTCAGGGAGGAG--TTAGGGCAGGGGGACCGGTCAGGGAGG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438308 57 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=19691.000000 s hg38.chr3_KI270937v1_alt 80799 45 + 165607 AGTTAGGGCAGTAGGACGGGTCAGGGAGGAG-TTAGGGCAGGAGGA s panTro4.chr3_GL389630_random 58861 45 - 103936 agttagggcaggaggacaggtca-ggaggagactagggcaggAGGA i panTro4.chr3_GL389630_random C 0 T 177 s nomLeu3.chr11 2868653 45 - 123690457 AGTTAGGGCAGGAGGACGGGTCAGGGAGGAG-TTAGGGCAGGGGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438251 45 - 192460366 AGCTAGGGCAGGGGGACCGGTCGGGGAGGAG-TTAGGGCAGGGGGA i macFas5.chr2 T 57 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=525.000000 s hg38.chr3_KI270937v1_alt 80844 2 + 165607 CC s panTro4.chr3_GL389630_random 58729 2 - 103936 CG i panTro4.chr3_GL389630_random T 177 C 0 s nomLeu3.chr11 2868698 2 - 123690457 CC i nomLeu3.chr11 C 0 I 28 s macFas5.chr2 192438296 2 - 192460366 CC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=939.000000 s hg38.chr3_KI270937v1_alt 80846 9 + 165607 GGTC--GGAGG s panTro4.chr3_GL389630_random 58731 11 - 103936 GGTCAGGGAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868728 11 - 123690457 AGTCAGGGAGG i nomLeu3.chr11 I 28 C 0 s macFas5.chr2 192438298 9 - 192460366 AGTTA-GGAG- i macFas5.chr2 C 0 T 129 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=6713.000000 s hg38.chr3_KI270937v1_alt 80855 49 + 165607 AG-TTAGGGCAGGAGGACCGGTCAGGGAG----GAGTTAGGGCAGCAGTATTGG s panTro4.chr3_GL389630_random 58742 50 - 103936 AGACTTgggcaggaggaccagtcagggag----gagttagggcaggaggaccgg i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868739 53 - 123690457 AG-TTAGGGCAGGGGGACCAGTTAGGAGGCCATGACCTAGGACTTCAGCAGTGG i nomLeu3.chr11 C 0 T 268 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438307 129 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C a score=4377.000000 s hg38.chr3_KI270937v1_alt 80904 54 + 165607 TCAGGGAGGAGTTAGGGGAGGAGGACCGATCAGGGAAGAGAGTTAGGGCAGGAG s panTro4.chr3_GL389630_random 58792 54 - 103936 tcagggaggagttagggcaggaggactggtcagggaggagacttagggcaggag i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e macFas5.chr2 192438307 129 - 192460366 T e rheMac3.chr2 192586383 0 + 192599291 C e nomLeu3.chr11 2868792 268 - 123690457 T a score=329.000000 s hg38.chr3_KI270937v1_alt 80958 2 + 165607 GA s panTro4.chr3_GL389630_random 58846 2 - 103936 ga i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192438178 2 - 192460366 GG i macFas5.chr2 T 129 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C e nomLeu3.chr11 2868792 268 - 123690457 T a score=600.000000 s hg38.chr3_KI270937v1_alt 80960 1 + 165607 C s panTro4.chr3_GL389630_random 58848 1 - 103936 c i panTro4.chr3_GL389630_random C 0 I 57 s nomLeu3.chr11 2868524 1 - 123690457 C i nomLeu3.chr11 T 268 C 0 s macFas5.chr2 192438180 1 - 192460366 C i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=7651.000000 s hg38.chr3_KI270937v1_alt 80961 14 + 165607 CGGTCAGGGAGGAG s panTro4.chr3_GL389630_random 58906 14 - 103936 CGGTCAGGGAGgag i panTro4.chr3_GL389630_random I 57 T 387 s nomLeu3.chr11 2868525 14 - 123690457 CAGTCAGGGAGGAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438181 14 - 192460366 CAGTCAGGGAGGAG i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=7641.000000 s hg38.chr3_KI270937v1_alt 80975 41 + 165607 TTAGGGCAGCAGTATTGGTCAGGGAGGAGTTAGGGGAGGAG s nomLeu3.chr11 2868539 41 - 123690457 TTAGGACTGGAGGATGGGTCAGGGAGGAGTTAGGGCAGGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438195 41 - 192460366 TTAGGGCAGGGGGACCAGTCCGGGAGGAGCTAGGGCAGGGG i macFas5.chr2 C 0 T 58 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C e panTro4.chr3_GL389630_random 58920 387 - 103936 T a score=2451.000000 s hg38.chr3_KI270937v1_alt 81016 11 + 165607 GACCGGTCAGG s nomLeu3.chr11 2868580 11 - 123690457 GACTGGTCAGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438178 11 - 192460366 GGCCAGTCAGG i macFas5.chr2 T 58 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C e panTro4.chr3_GL389630_random 58920 387 - 103936 T a score=27602.000000 s hg38.chr3_KI270937v1_alt 81027 60 + 165607 GAGGAGTTAGGGCAGCAGTATCGGTCAGGGAGGAGTTAGGGCAGGAGGACCGATCAGGGA s panTro4.chr3_GL389630_random 58533 60 - 103936 gAGGAGTTAGGGCTAGAGGATCGGTCAGGGAGGAGTTAGAGCAGGGGGACTGGTCAGGGA i panTro4.chr3_GL389630_random T 387 C 0 s nomLeu3.chr11 2868591 60 - 123690457 GAGGAGTTAGGGCAGGGGGACAGGTCAGGGAGGAGTTAGGGCAGGGGGACCGGTCAGGGA i nomLeu3.chr11 C 0 T 436 s macFas5.chr2 192438189 60 - 192460366 GAGGAGTTAGGGCAGGGGGACCAGTCCGGGAGGAGCTAGGGCAGGGGGACCGGTCGGGGA i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=0.000000 s hg38.chr3_KI270937v1_alt 81087 4 + 165607 AGAG s panTro4.chr3_GL389630_random 58593 4 - 103936 GGAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868215 4 - 123690457 GGAG i nomLeu3.chr11 T 436 C 0 s macFas5.chr2 192438249 2 - 192460366 GG-- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=123.000000 s hg38.chr3_KI270937v1_alt 81091 2 + 165607 AG s nomLeu3.chr11 2868219 2 - 123690457 AC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438251 2 - 192460366 AG i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C e panTro4.chr3_GL389630_random 58597 0 - 103936 C a score=5802.000000 s hg38.chr3_KI270937v1_alt 81093 16 + 165607 TTAGGGCAGGAGGACC s panTro4.chr3_GL389630_random 58597 16 - 103936 TTAGGGCAGGAAAATC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868221 15 - 123690457 TTAGGGCAGGAGG-CC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438253 16 - 192460366 CTAGGGCAGGGGGACC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e chlSab2.chr15 91382819 28 + 91754291 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=3808.000000 s hg38.chr3_KI270937v1_alt 81109 5 + 165607 GGTCA s panTro4.chr3_GL389630_random 58613 5 - 103936 GGTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868236 5 - 123690457 AGTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438269 5 - 192460366 GGTCG i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91382847 5 + 91754291 GGTCA i chlSab2.chr15 I 28 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e papAnu2.chr2 187357705 0 + 187378091 C e rheMac3.chr2 192586383 0 + 192599291 C a score=26281.000000 s hg38.chr3_KI270937v1_alt 81114 24 + 165607 GGGAGAAGTCAGGGCAGGAGGACT s panTro4.chr3_GL389630_random 58618 24 - 103936 GGGAGAAGTCAGGGCAGGAGGACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868241 24 - 123690457 GGGAGGAGTTAGGGCAGGGGGCTG i nomLeu3.chr11 C 0 I 435 s macFas5.chr2 192438274 24 - 192460366 GGGAGGAGTTAGGGCAGGGGGACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357705 24 + 187378091 gggaggagttagggcagggggacc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382852 24 + 91754291 GCGAGGAGTTAGGGCAGGGGGAGT i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e rheMac3.chr2 192586383 0 + 192599291 C a score=6408.000000 s hg38.chr3_KI270937v1_alt 81138 6 + 165607 GGTCAG s panTro4.chr3_GL389630_random 58642 6 - 103936 GGTCAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868700 6 - 123690457 GGTCAG i nomLeu3.chr11 I 435 C 0 s macFas5.chr2 192438298 6 - 192460366 AGTTAG i macFas5.chr2 C 0 T 29 s papAnu2.chr2 187357729 6 + 187378091 agtcgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382876 6 + 91754291 GGTCAG i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e rheMac3.chr2 192586383 0 + 192599291 C a score=23454.000000 s hg38.chr3_KI270937v1_alt 81144 27 + 165607 AGAGGAGTTAGGGCAGGAGG-CCTGTCT s panTro4.chr3_GL389630_random 58648 27 - 103936 AGAGGAGTTAGGGTAGGAGG-CCAGTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868706 27 - 123690457 GGAGGAGTTAGGGCAGGAGG-CCAGTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192438275 27 - 192460366 GGAGGAGTTAGGGCAGGGGGACCAGTT- i macFas5.chr2 T 29 C 0 s papAnu2.chr2 187357735 27 + 187378091 ggaggagttagggcagggggaccggtc- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382882 27 + 91754291 CAAGGAGTTAGGGCAGGGGGACCGGTC- i chlSab2.chr15 C 0 I 1 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e rheMac3.chr2 192586383 0 + 192599291 C a score=10275.000000 s hg38.chr3_KI270937v1_alt 81171 6 + 165607 GGGAGG s panTro4.chr3_GL389630_random 58675 6 - 103936 GGGAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868733 6 - 123690457 GGGAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586383 6 + 192599291 gggagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438302 6 - 192460366 AGGAGG i macFas5.chr2 C 0 T 19 s papAnu2.chr2 187357762 6 + 187378091 gggagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382910 6 + 91754291 GCGAGG i chlSab2.chr15 I 1 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I a score=9753.000000 s hg38.chr3_KI270937v1_alt 81177 9 + 165607 AGTT-AGGGT s panTro4.chr3_GL389630_random 58681 10 - 103936 AGTTAAGGGT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2868739 9 - 123690457 AGTT-AGGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586389 9 + 192599291 agtt-agggc i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 187357768 9 + 187378091 agtt-agggc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382916 9 + 91754291 AGTT-AGGGC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2406486 19 - 202140232 I e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869171 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e macFas5.chr2 192438308 19 - 192460366 T a score=45595.000000 s hg38.chr3_KI270937v1_alt 81186 16 + 165607 AGGAGGACCAGTTAGG s panTro4.chr3_GL389630_random 58691 16 - 103936 AGGAGGACCGGTCAGG i panTro4.chr3_GL389630_random C 0 I 1236 s ponAbe2.chr3 2406505 16 - 202140232 AGGAGGACCAGTTAGA i ponAbe2.chr3 I 19 C 0 s nomLeu3.chr11 2868748 16 - 123690457 AGGGGGACCAGTTAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586398 16 + 192599291 agggggaccagtcagg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438289 16 - 192460366 AGGGGGACCAGTTAGG i macFas5.chr2 T 19 C 0 s papAnu2.chr2 187357777 16 + 187378091 agggggaccagttagg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382925 16 + 91754291 AGGGGGACCAGTTAGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73869171 16 + 74750902 GAGAGGACCAGGTAGG i calJac3.chr17 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e canFam3.chr33 2335825 2307 - 31377067 I a score=150693.000000 s hg38.chr3_KI270937v1_alt 81202 66 + 165607 AGGCAGTGACTTAGGACTTCAGCAGTGGCACTAGAAAGGGGATGGATATGAACGACATTGCAAAGT s ponAbe2.chr3 2406521 66 - 202140232 AGGCTGTGACCTAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGATATGAATGATATGGCAGAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868764 66 - 123690457 AGGCCATGACCTAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGATATGAACAACATTGCAAAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586414 66 + 192599291 aggccgtgacccaggACTTCAGCAGCGCGACTAGAAAGGGGATGGGTATGAACGATATTGCAAAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438305 66 - 192460366 AGGCCGTGACCCAGGACTTCAGCAGCGCGACTAGAAAGGGGATGGGTATGAACGATATTGCAAAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357793 66 + 187378091 aggCCGTGACCCAGGACTTCAGCAGCGGGACTAGAAAGGGGATGGGTATGAACGATATTGCAAAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91382941 66 + 91754291 AGGCCGTGACCCAGGACTTCAGCAGTGGGACTAGAAAGGGGATGGGTATGAACGATATTGCAAAGT i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73869187 65 + 74750902 AGGCTGTGACCTAGGGCTTCAGCAGTGGGACTAG-AAGGGGATGGATATGAACGATATTACAAAGT i calJac3.chr17 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e canFam3.chr33 2335825 2307 - 31377067 I e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=271719.000000 s hg38.chr3_KI270937v1_alt 81268 191 + 165607 AAAACTAGAGAGACggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcgggtggatca------------------------------tgaggtcaggagatcgagaccagcctggccaacatggtgaaaccctatctctactaaaaa-----a-------------------------------------aaaaaaaaaaacagccaggcgtggtggcgggcgcctgtaatcccagctactcc s ponAbe2.chr3 2406587 196 - 202140232 AAAACTAGAGAGATggccaggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcgggcggatca------------------------------tgaggtcaggagaacaagaccagactggccaacatggtgaaaccctatctctactaaaaatcagta-------------------------------------aaaaaaaaaaatagacaggcgtggtggcaggcacctgtaatcccagctacttc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2868830 196 - 123690457 AAAACTAGAGAGATggccgtgcacagtggctcactcctgtaatcccagcactttgggaggccaaggtgggcagatca------------------------------caaggtcaggagatcgagaccagcctggccaacatggtgaaaccctatctctactaaaaatcaata-------------------------------------aaaaaaaaaaatagccaggtgtggtggcaggcacctgtaatcccagctactcC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192586480 198 + 192599291 AAAACTAGAGAGATggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-----------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438371 196 - 192460366 AAAACTAGAGAGATggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatca------------------------------cgaggtcaggagatcgagaccagcctggccaacatggtgaaaccgtatctctactaaaaatccaga-------------------------------------aaaaaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187357859 193 + 187378091 AAAACTAGAgagatggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggcggatca------------------------------cgaggtcaggagatcgagactagcctggccaacatggtgaaaccgtatctctactaaaaatccaga----------------------------------------aaaaaaaaaagccagctgtggtggcgggtgcctgtaatcccagcgactcc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91383007 192 + 91754291 AAAACTAGAGAGATggccgggcacagtggctcactcctgtaatcccagcactttgggaggccaaggcaggtggatca------------------------------cgaggtcaggagatcgagaccagcctggccaacatggtgaaaccgtatctctactaaaaatccaga-----------------------------------------aaaaaaaaagccagctgtggtggcgggcgcctgtaatcccagcgactcc i chlSab2.chr15 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869252 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=146768.000000 s hg38.chr3_KI270937v1_alt 81459 128 + 165607 agaggctgaggcaggagaatttgcttgaaccagggagtcggaagttgcagtgagctgagatcgcaccactgcactccagcctgggcaatagagtgagactccgtctcaataacaaaacaaacaaacaa s ponAbe2.chr3 2406783 127 - 202140232 agaggctgaggcaggagaatt-gcttgaaccagggagtcggaggttgcagtgagctgagatcgtgccactacactccagcctgggcaatagagtgagactccatctcaataacaaaacaaacaaacaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192586678 121 + 192599291 agaggctgaggcaggagaatc-gcttgaaccagggagttggaggttgcagtgagcagaggtcgcgccgctgcactccagcctgggcagtacagtgagactccgcctcaataacaaatcaaac------ i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438567 121 - 192460366 agaggctgaggcaggagaatc-acttgaaccagggagttggaggttgcagtgagcagaggttgtgctgctgcactccagcctgggcagtacagtgagactccacctcaataacaaatcaaac------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187358052 121 + 187378091 agaggctgaggcaggagaatc-acttgaaccagggagttggaggttgcagtgagcagaggtcgcgccgctgcactccagcctgggcagtacagtgagactccgcctcaataACAAATCAAAC------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91383199 120 + 91754291 agaggctgaggcaggagaatt-gcttgaaccagggagttggaggttgcagtgagctgagatcgcgcc-ctgcactccagcctggacagtacagtgagactccgcctcaataacaaatcaaac------ i chlSab2.chr15 C 0 C 0 e mm10.chr16 32803693 1021 + 98207768 I e calJac3.chr17 73869252 0 + 74750902 C e canFam3.chr33 2335825 2307 - 31377067 I e nomLeu3.chr11 2869026 0 - 123690457 C e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=881774.000000 s hg38.chr3_KI270937v1_alt 81587 436 + 165607 aaaaCTAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTGGAGTCCAGGAAGCC-AAGGACAGCAAAAGCATCCACAGAAACAGGA--------AAACGGCAGGTGTGGGAGGGAAGGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAG-C-GCCTCCTGGATCTTTGAAATCCTGTGCACCCCGGGAGACTCC-GGGAGGCCCATCTGAGCTCACCGGAGAAAGGTCTGCCG--TCTCTCCTCTCATCACTGGGGACAGAAAGCCTGAACATGAGGCCTG-GACTACAGGGCTCAGACCAGAATATTTCCAGACTTAAGGGCAGTAATGTGGAGCCCAGGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTCAAGGGGTGCTGGgttcttattttctactttcaagaaatgtttgctatagtcac s ponAbe2.chr3 2406910 436 - 202140232 aaaaCTAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAATAGATGACCCTGAGGTCTGGAGTCCAGGAAGCC-AAGGACAGGGAAAGCATTCACAGAAACAGGA--------AAATGGCAGGTGCGGGAGGGAAGGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAG-C-TCCTCCTGGATCTTTGAAATCCTGTGCATCCCAGGAGACTCT-GGGAGGCCCATCTGAGCTCATCGGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAAAGCCTGAACATGAGGCCTG-GACTATGGGGCTCAGACCAGAATATTTCCAGATTTAAGGGCAGTAATGTGGAGCCCAAGAAGGAATATTGAGGACAGA-GGGCACATTACTTAGCTAAAGGGGTGCTGGGTTCTTATTTTCTACTTTCAAGAAATGTTTGATATAGTCAT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192586799 434 + 192599291 -aaaCCAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTGGAGTCCAGGAAGTC--AGGACAGGGAAAGCATTCACAGAAACAGGA--------AAAGGGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-CCCCGGGCAG-C-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGACTCC-AGGAGGCCCATCTGAGCTCACCGGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAAAGCCTGAATATGAGGCCTG-GACTACGGGGCTCAGACCAGAATATTTCCAGACTTAAGGGCAGTAATGTGGAGCCCGGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTAGCTAAAGGGGTGCTGGgttcttattttctactttcgagaaatgtttgctatagtcat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192438688 434 - 192460366 -aaaCCAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTGGAGTCCAGGAAGTC--AGGACAGGGAAAGCATTCACAGAAACAGGA--------AAAGGGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACCCCACAG-CCCCGGGCAG-C-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGACTCC-AGGAGGCCCATCTGAGCTCACCGGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAAAGCCTGAATATGAGGCCTG-GACTACGGGGCTCAGACCAGAATATTTCCAGACTTAAGGGCAGTAATGTGGAGCCCGGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTAGCTAAAGGGGTGCTGGgttcttattttctactttcgagaaatgtttgctatagtcat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187358173 434 + 187378091 -AAACTAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGTCTGGAGTCCAGGAAGTC--AGGACAGGGAAAGCATTCACAGAAACGGGA--------AAAGGGCAGGTGTGGGAGGGAATGTGAGAGGTTCATCAGACcccacag-cccctggcag-c-cCCTCCTGGATCTTTGAAATCTTGTGCGCCCCAGGAGACTCC-AGGAGGCCCATCTGAGCTCACCAGAGAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAAAGCCTGAATATGAGGCCTG-GACTACGGGGCTGAGACCAGAATATTTCCAGGCTTAAGGGCAGTAATGTGGAGCCCGGGAAGGAATATTGAGAAAAGA-GGGCACATTACTTAGCTAAAGGGGTGCTGGGTTCTTATTTTCTACTTTCGAGAAATGTTTGCTATAGTCAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91383319 429 + 91754291 -aaaCTAGAGAGACTTGGCACCTT-----------------GCAGAGAGAAGCAAAAGATGACCCTGAGGGCTGGAGTCCAGGAAGTC--AGGACAGGGAAAGCATTCACAGAAACGGGA--------AAAGGGCAGGTGTGGGAGGGAGTGTGAGAGGTTCATCAGACCCCACAG-CCCCTGGCAG-C-CCCTCCTGGATCTTTGAAATCCTGTGCGCCCCAGGAGACTCC-AGGACGCCC----GAGCTCACCGGAAAAAGGTCTGCCG--CCTCTCCTTTCATCACTGGGGACAGAAAGCCTGAATATGAGGCCT--GACTACGGGGCTCAGACCAGAATATTTCCAGACTTAAGGGCAGTAATGTGGAGCCCAGGAAGGAATATTGAGGAAAGA-GGGCACATTACTTACCTAAAGGGGTGctgtgttcttattttctactttcaagaaatgtttgctatagtcat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73869252 444 + 74750902 AAAACTAGAGAGACTTGGCAACTT-----------------GCAGAGAGAAGCAGAAGATGACCCTGAGGCCTGGAGTCCAGGAAGCC-AAGGACAGGGAAACCATCCACAGAAACAGAAAAGGGTAGAAAGGGTAGCTGTGGAAGGGAAAGTGATTGGTTCATCAGACCCCACAG-CCCCTGGAAGCC-CCCTCCTCAATCTCGGAAATCCCATGCACCCCAGGAGACTGC-CAGAGGCCCATCTGGGCTCACTGGAGAAAGGTCGGCCG--CCTCTCCTTTCATTTCTGGGGAGAGGAAGCCTGAACATAAGGCCTG-GACTAC-GGGCTCAGACCAGAATATTTCCGGACTTAAGGGCGGTAATGTGGAGCCCGGGAAGGAATATTGAGGAGACA-GCACAAATTACTTAGCTAAAGGGATGCTGGGTTTTTATTTTCTACTTTCAAGAAATGTTTGCTATAGTAAT i calJac3.chr17 C 0 C 0 s canFam3.chr33 2338132 450 - 31377067 AGAACTAGAAAGACTTGGCACCTTGCAGAGGAAGGGCAGAGGCAGAGAGAATTAAAAGAAGATCCCGAGGCTTGGAGTGCAGGAAGCTGAAGGGTAGGG-ATCTATTCATGGAACAGGAG--------GAGGAGTAGGTCTGAGAGGGAAGGCGACGGGCTCAGCGGACCCCAAAGCCCCCTGGCTT-CACCCTCCCGGAGCTATGAAATCCT---CACACAAGGAAACTCCTGGGAGGCCAGTCCCAACCCACCAGAGGAAGGTCCCCCTTCCCTCTCTTTTCA-CTCTAGGAAGAGAGG---TGGGC---AGGCGTGAGGCCACAGGGCTCAGACCAGGCTATTTTGGGACTTACAGGCAGTGATATGGTGCCTGGGAAGGAATATTGAGGAAGGATGCAGGGATCACTTAGCCAAAGAAGTGCTAGGTTCTCATATTCCACTTTCAAGAAATGTTTGCTCTATTCAT i canFam3.chr33 I 2307 C 0 e mm10.chr16 32803693 1021 + 98207768 I e nomLeu3.chr11 2869026 0 - 123690457 C e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=152517.000000 s hg38.chr3_KI270937v1_alt 82023 77 + 165607 tgtaaccaccacaaaacagtgaataataccatgagccaaatgtatg------------------tttcacaatttgtat----------------------------------------------ggctgattctacgcac s ponAbe2.chr3 2407346 76 - 202140232 TGTTACCATCACAAAACAATGAATAATACCATGAGCCAAACATATG------------------TT-CATAATTTGTAT----------------------------------------------GGCTGATTCTATGCAC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192587233 77 + 192599291 tgtagccgtcacaaaacaatgaataataccgtgagccaaacgtatg------------------tttcataatttgtat----------------------------------------------ggctgatcctatgcac i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439122 77 - 192460366 tgtagccgtcacaaaacaatgaataataccgtgagccaaacgtatg------------------tttcataatttgtat----------------------------------------------ggctgatcctatgcac i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187358607 77 + 187378091 TGTAGCCGTCACAAAACAATGAATAATACCGTGAGCCAAACGTATG------------------TTTCATAATTTGTAT----------------------------------------------GGCTGATCCTACGCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91383748 77 + 91754291 tgtagccgtcacaaaacaatgaataataccacgagccaaacgtatg------------------tttcatcatttgtat----------------------------------------------ggccgatcctatgcac i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73869696 75 + 74750902 TGCAACCATCACAAAACAATGAATAAAAACGTGAGCCAAACG--TG------------------TTTCGTAACTTGTAT----------------------------------------------CACTGATTCTACACAC i calJac3.chr17 C 0 C 0 s mm10.chr16 32804714 76 + 98207768 TGTAATCGTCACAACACAATGAGCAATATTACGAGCCAAGTGTAT-------------------TTTTGTAATTTTTAT----------------------------------------------GGCTAATTCTGTGCAC i mm10.chr16 I 1021 C 0 s canFam3.chr33 2338582 137 - 31377067 TGTAACCACCACAA-ACGATG---AATTCCATGAGCCAAATTTATGTTTTTTTTGTGTGTGtttttttttaacttatttatgatagtcacagagagagagaagcagagacataggcagagggagaagcaggctccatgcac i canFam3.chr33 C 0 I 123 e nomLeu3.chr11 2869026 0 - 123690457 C e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=463009.000000 s hg38.chr3_KI270937v1_alt 82100 218 + 165607 atttaaatgtgtttatgacaattgtacatttcagttttcctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGC-ATCCTGGGC----CCAGCCATGCTGGCCTCAGTGGGCCAAGCTGGGGACAGATGACCTCTGCTCCGTGGATCCTGCTGGCTCAGGGTGGGGAAGGGGCCTCAGAAGAGGAGTCAGGCTCTCTTCTTTATTCT s ponAbe2.chr3 2407422 218 - 202140232 ATTTAAATATGTTCATGACAATTGTAGATGTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGCACACAGGATGGGAGCTGAGAGACAAGC-ATCCTGGGC----CCAGCCATGCTGGCCTCAGTGGGCCAAGTTGCGGGCAGATGACCTCTGCTCCGTGGATCCTGCTGGCTCAGGGTGTGGAAGGGACCTCAGGAGAGGAGTCAGGCTCTCTTCTTGATTCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192587310 217 + 192599291 atttaaatgtgtttatgacgattgtagatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGCTACCCTGG------CCAGCCGTGCTGACCTCAGTGGGCCAAGCTGGGGACAGATGACCTCTGCTGCGTGGATCCTGCTGGCTCAGGGTGTGGAAGGGGCCTCAGGAGAGGAGTCAGGGTCTCTTTCTGATTCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439199 217 - 192460366 atttaaatgtgtttatgacgattgtagatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGCTACCCTGG------CCAGCCGTGCTGACCTCAGTGGGCCAAGCTGGGGACAGATGACCTCTGCTGCGTGGATTCTGCTGGCTCAGGGTGTGGAAGGGGCCTCAGGAGAGGAGTCAGGGTCTCTTTCTGATTCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187358684 216 + 187378091 ATTTAAATGTGTTTATGACAATTGTAGATTTCAGTTTTGCTCTGGTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGCTACCCCGG------CCAGCCATGCTGACCTCAGTGGGCCAAGCTGGGGATAGATGACCTCTGCAGCGTGGATCCTGCTGGCTCAGCGTGTGGAAGGGGCCTCAGGAGAGGAGTCAGGGTCTCTTTCTGATT-C i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91383825 217 + 91754291 atttaaatgtgtttatgacgattgtaaatttcagttttgctctggTTAAACCAATGTGGAAGTACACAGGATGGGAGCTGAGAGACAAGCTACCCTGG------CCAGCCATGCTGACCTCAGTGGGCCAAGCTGGGGACAGATGACCTCTGCTGCGTGGATCCTGCTGGCTTAGGGTGTGGAAGGGGCCTCACGAGAGGTGTCAGGGCCTCTTCCTGATTCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73869771 218 + 74750902 ATTTAAATGTGTTCATGACAGCTGTAGATTTCAGTTTTGCTCTGGCTAAACCAATGCAGAAGTACACAGGATGCGAGCTGAGAGACAAGCACACCTGG-C----CCAGCAATTCTGGCCTCAGCCAGCCACGCTGGGGACGGATGACCTCTGCTCCATGGATCCTGCTGGCTCGGTGTGCAGAAGGGGCCTCAGGAGCGGCATCAGGCTTTCTTCTTGATCCC i calJac3.chr17 C 0 C 0 s mm10.chr16 32804790 200 + 98207768 TTTTAAATGTGTTTACAACAATCCCAGGTTTCAGTTTTCCCCAGGCCAAGCCAATGTGGGGGCTAATAGGATGGCAGCTGAGAGACAGATACCCCTGGGCTGGGCCAGCCATGTTGGCCCCAACAAACCAA---------AGGTGACCTCTGTTCCATGGGTCCTGCTGGCCAGGGCTGGAGAA--------------AGACTCAGGCTCTCTTCCTGATTCC i mm10.chr16 C 0 C 0 s canFam3.chr33 2338842 195 - 31377067 ATTTAAATGTGTTTACAAAAATCACAGATTTCCATTTTCCTCTGGCTGAGCCAATGTGGAAGAACACAGAACAGAAGCCAGGAGACAAGCCCACCAGA-T----CCAGTGATAAGGCCCTCGCTGGCCCAGG--GGGGCAGGGTGGGCTCTGCATCACGGGGC----------------AGCGAGGAGCTTCAGGGGA--CCTCGGA---TCTTCTTGATCCC i canFam3.chr33 I 123 C 0 e nomLeu3.chr11 2869026 0 - 123690457 C e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=344067.000000 s hg38.chr3_KI270937v1_alt 82318 122 + 165607 CCTCACAGCCATGGTGAATGGCATTCCTGGGAGGCTGGTTTGGAGAACTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTG-----TTCCCACCTG----TGCCTGTGTTCCCAGATAGCAGCTGCCTC s ponAbe2.chr3 2407640 122 - 202140232 CCTCACGGCCATAGAGAACAGCATTCCTGGGAGGCTGGTTTGGAGAAGTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTG-----TTCCCACCTG----TACCTGTGTTCCCAGATAGCAGCTGCCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869026 122 - 123690457 CCTTTCGACCATGGAGAACGGCATTCCGGGCAGGCTGGTTTGGAGAAGTCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTA-----TTCCCACCTG----TGCCTGTGTTCCCAGATAGCAGCTGCCTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587527 122 + 192599291 CCTCACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAAGCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTG-----TTCCCACCTG----TGCCTGTGTTCCCAGCTAGCAGCTGCCTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439416 122 - 192460366 CCTCACGGCCATGGAGAACGGCATTCCTGGGAGGCTGGTTTGGAGAAGCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTG-----TTCCCACCTG----TGCCTGTGTTCCCAGCTAGCAGCTGCCTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187358900 122 + 187378091 CCTCACGGCCATGGAGAAGGGAATTCCTGGGAGGCTGGTTTGGAGAAGCCGCTGAACCTAAGTGAGCGGGAAGTGAAGGTCTG-----TTCCCACCTG----TGCCTGTGTTCCCAACTAGCAGCTGCCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91384042 122 + 91754291 CCTCACGGCCATGGAGAACAGCATTCCTGGGAGGCTGGTTTGGAGAAGCCGCTGAACCTAAGTGAGCAGGAAGTGAAGGTCTG-----TTCCCACCTG----TGCCTGTGTTCCCAACTAGCAGCTGCCTC i chlSab2.chr15 C 0 I 971 s calJac3.chr17 73869989 121 + 74750902 CTCTATGGCCATGGAGAACGGCATTCCTGGGAGGCCGGTTTGGAGAAGCCGCTGAACCTAAGTGAGCAGGAAGCGAAGTTCTC-----TTCCCACCTG----TG-CTGTGTTTCCAAATCACAGCTGCCTC i calJac3.chr17 C 0 C 0 s mm10.chr16 32804990 116 + 98207768 CTTCATAGTCACCGAGAGTGGCCTTCTGGAGAGGCTG---TGGAGGAGCTGCAGAACCTGA-----CAAGCAACAAA--CCTC-----ATCCAAGTTGCTGACATCTGTGGTCTCATACTCTAAGCATCTC i mm10.chr16 C 0 C 0 s canFam3.chr33 2339037 127 - 31377067 CTTCATGGAGATGGAGAGGGGCAGCCCTGGGAGGCTGGCTTGGAGAAGCTGGTGGACCTAAGCGGGCAGAAAAGAAAAGGCTGTATCTTTCCAGCTTA----TTTTCATGTCCCCAAATGACAGCTATGTC i canFam3.chr33 C 0 I 32 e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=5868.000000 s hg38.chr3_KI270937v1_alt 82440 4 + 165607 CAGG s ponAbe2.chr3 2407762 4 - 202140232 CTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869148 4 - 123690457 GTGG i nomLeu3.chr11 C 0 I 47 s rheMac3.chr2 192587649 4 + 192599291 GTGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439538 4 - 192460366 GTGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359022 4 + 187378091 GTGG i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870110 4 + 74750902 GTGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32805106 4 + 98207768 TTGG i mm10.chr16 C 0 C 0 e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=1944.000000 s hg38.chr3_KI270937v1_alt 82444 2 + 165607 AG s ponAbe2.chr3 2407766 2 - 202140232 CG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192587653 2 + 192599291 CG i rheMac3.chr2 C 0 I 3 s macFas5.chr2 192439542 2 - 192460366 CG i macFas5.chr2 C 0 I 3 s papAnu2.chr2 187359026 2 + 187378091 CG i papAnu2.chr2 C 0 I 3 s calJac3.chr17 73870114 1 + 74750902 -G i calJac3.chr17 C 0 I 4 s mm10.chr16 32805110 1 + 98207768 -G i mm10.chr16 C 0 C 0 e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e nomLeu3.chr11 2869152 47 - 123690457 I e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=6735.000000 s hg38.chr3_KI270937v1_alt 82446 4 + 165607 ACTC s ponAbe2.chr3 2407768 4 - 202140232 ACTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869199 4 - 123690457 ACTC i nomLeu3.chr11 I 47 C 0 s rheMac3.chr2 192587658 4 + 192599291 ACTC i rheMac3.chr2 I 3 C 0 s macFas5.chr2 192439547 4 - 192460366 ACTC i macFas5.chr2 I 3 C 0 s papAnu2.chr2 187359031 4 + 187378091 ACTC i papAnu2.chr2 I 3 C 0 s calJac3.chr17 73870119 4 + 74750902 AGTC i calJac3.chr17 I 4 C 0 s mm10.chr16 32805111 2 + 98207768 --CC i mm10.chr16 C 0 C 0 e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e panTro4.chr3_GL389630_random 58707 1236 - 103936 I a score=84745.000000 s hg38.chr3_KI270937v1_alt 82450 40 + 165607 ACCAGGAGCCAGGTCC-CTCCATACCTGATCTCAATTAAC--------------T s panTro4.chr3_GL389630_random 59943 40 - 103936 ACCAGGAGCCAGGTCC-CTCCATACCTGATCTCAATTAAC--------------T i panTro4.chr3_GL389630_random I 1236 C 0 s ponAbe2.chr3 2407772 40 - 202140232 ACCAGGAGCCAGGTCC-CTCCACACCTCATCTCAATTAAC--------------T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869203 40 - 123690457 CCCAGGAGCCAGGTCC-CTCCATACCTCATCTCAATTTAT--------------T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587662 40 + 192599291 ACCAGGAGCCACGTCC-CTCCCCACCTGATCTCAATTAAT--------------T i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439551 40 - 192460366 ACCAGGAGCCACGTCC-CTCCCCACCTGATCTCAATTAAT--------------T i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359035 40 + 187378091 ACCAGGAGCCACGTCC-CTCCCTACCTGATCTCAATTAAT--------------T i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870123 55 + 74750902 ACCAGGAGCCAGGCCCTCTCCACGTCTGATCTCAATCAATCCTCCCTCGTGGGGC i calJac3.chr17 C 0 C 0 s mm10.chr16 32805113 39 + 98207768 AGCAAGAGCAATGGT--CTCCATGCTTGCTTTCAATGAGT--------------T i mm10.chr16 C 0 I 1020 e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I a score=23088.000000 s hg38.chr3_KI270937v1_alt 82490 14 + 165607 CACTCACCAGGAGC s panTro4.chr3_GL389630_random 59983 14 - 103936 CACTCACCAGGATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407812 14 - 202140232 CACTCACCAGGAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869243 14 - 123690457 CACTTACCAGGAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587702 13 + 192599291 CACTGA-CAGGAGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439591 13 - 192460366 CACTGA-CAGGAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359075 13 + 187378091 CATTCA-CAGGAGC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870178 14 + 74750902 CGCTCACCAGGAGC i calJac3.chr17 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I a score=13485.000000 s hg38.chr3_KI270937v1_alt 82504 11 + 165607 CAGGTCCCTCC- s panTro4.chr3_GL389630_random 59997 11 - 103936 CAGGTCCCTCC- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869257 11 - 123690457 CAGGTCCCTCC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587715 11 + 192599291 CACGTCCCTCC- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192439604 11 - 192460366 CACGTCCCTCC- i macFas5.chr2 C 0 I 2 s papAnu2.chr2 187359088 11 + 187378091 CGCGTCCCTCC- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870192 12 + 74750902 CAGGCCCTCTCC i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I a score=30641.000000 s hg38.chr3_KI270937v1_alt 82515 27 + 165607 ATACCTGACCTCAATTAACTCACTCAC s panTro4.chr3_GL389630_random 60008 27 - 103936 ATACCGGATCTCAATTAACTCACTCAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869268 27 - 123690457 ATACCTCATCTCAATTAACTCACTCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587726 27 + 192599291 CTACCTGATCTCAATTAATTCACCCAC i rheMac3.chr2 C 0 I 39 s macFas5.chr2 192439617 26 - 192460366 ACACCTGATCTCAATTAATTCACCCA- i macFas5.chr2 I 2 C 0 s papAnu2.chr2 187359099 23 + 187378091 CTACCTGATCTCAATTAATTCAC---- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870204 27 + 74750902 ACGCCTGACCTCAATCAATCCTCCCTT i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I a score=608.000000 s hg38.chr3_KI270937v1_alt 82542 5 + 165607 -CAGGA s panTro4.chr3_GL389630_random 60035 5 - 103936 -CAGGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869295 5 - 123690457 -CAGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439643 5 - 192460366 -CAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359122 3 + 187378091 ---GGA i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870231 5 + 74750902 GTGGG- i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=-255.000000 s hg38.chr3_KI270937v1_alt 82547 20 + 165607 GCCAGGTCCCTCCATACCTC s panTro4.chr3_GL389630_random 60040 15 - 103936 GACAGGTCCCTCCAT----- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869300 20 - 123690457 GCCAGGCCTCTCCAGACCTG i nomLeu3.chr11 C 0 T 166 s macFas5.chr2 192439648 14 - 192460366 CCCACGTCCCTCCC------ i macFas5.chr2 C 0 C 0 s calJac3.chr17 73870236 3 + 74750902 -----GCC------------ i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359125 0 + 187378091 C e rheMac3.chr2 192587753 39 + 192599291 I a score=546.000000 s hg38.chr3_KI270937v1_alt 82567 1 + 165607 A s nomLeu3.chr11 2869154 1 - 123690457 A i nomLeu3.chr11 T 166 C 0 s macFas5.chr2 192439662 1 - 192460366 A i macFas5.chr2 C 0 T 48 s calJac3.chr17 73870239 1 + 74750902 A i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359125 0 + 187378091 C e rheMac3.chr2 192587753 39 + 192599291 I e panTro4.chr3_GL389630_random 60055 0 - 103936 C a score=1446.000000 s hg38.chr3_KI270937v1_alt 82568 5 + 165607 CTCAC s nomLeu3.chr11 2869155 5 - 123690457 CTCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73870240 5 + 74750902 CTCAC i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359125 0 + 187378091 C e macFas5.chr2 192439663 48 - 192460366 T e rheMac3.chr2 192587753 39 + 192599291 I e panTro4.chr3_GL389630_random 60055 0 - 103936 C a score=5203.000000 s hg38.chr3_KI270937v1_alt 82573 16 + 165607 CAGCAGCCAGGTCCCT- s nomLeu3.chr11 2869160 16 - 123690457 CAGAAGCCAGGTCCCT- i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187359125 16 + 187378091 CAGAAGCCACGCCCCT- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870245 17 + 74750902 CAGGAGCCAGGCCCTCT i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e macFas5.chr2 192439663 48 - 192460366 T e rheMac3.chr2 192587753 39 + 192599291 I e panTro4.chr3_GL389630_random 60055 0 - 103936 C a score=13989.000000 s hg38.chr3_KI270937v1_alt 82589 23 + 165607 CCACACCTCATCTCAATTAACTC-------------- s panTro4.chr3_GL389630_random 60055 19 - 103936 ----AATGGATATCAGTTAACTC-------------- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869176 23 - 123690457 CCATACCTCATCTCAATTAACTC-------------- i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192439615 23 - 192460366 CTACACCTGATCTCAATTAATTC-------------- i macFas5.chr2 T 48 C 0 s papAnu2.chr2 187359141 23 + 187378091 CCCCACCTGATCTCAGTTAATTC-------------- i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870262 37 + 74750902 CCACGCCTGACCTCAATCAATCCTCCCTTGTGGGGCC i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=3810.000000 s hg38.chr3_KI270937v1_alt 82612 4 + 165607 ATTC s panTro4.chr3_GL389630_random 60074 4 - 103936 ACTT i panTro4.chr3_GL389630_random C 0 T 135 s nomLeu3.chr11 2869154 4 - 123690457 ACTC i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192439638 4 - 192460366 ACCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359164 4 + 187378091 ACTC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870299 4 + 74750902 ACTC i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1365.000000 s hg38.chr3_KI270937v1_alt 82616 1 + 165607 A s panTro4.chr3_GL389630_random 59943 1 - 103936 A i panTro4.chr3_GL389630_random T 135 C 0 s nomLeu3.chr11 2869158 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439642 1 - 192460366 A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359168 1 + 187378091 A i papAnu2.chr2 C 0 T 44 s calJac3.chr17 73870303 1 + 74750902 A i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1000.000000 s hg38.chr3_KI270937v1_alt 82617 1 + 165607 C s panTro4.chr3_GL389630_random 59944 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869159 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439643 1 - 192460366 C i macFas5.chr2 C 0 C 0 s calJac3.chr17 73870304 1 + 74750902 C i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359169 44 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=36446.000000 s hg38.chr3_KI270937v1_alt 82618 41 + 165607 CAGGAGCCAGGTCC-CTCCACACCTCATCTCAATTAACTCAC-------------- s panTro4.chr3_GL389630_random 59945 41 - 103936 CAGGAGCCAGGTCC-CTCCATACCTGATCTCAATTAACTCAC-------------- i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869160 41 - 123690457 CAGAAGCCAGGTCC-CTCCATACCTCATCTCAATTAACTCAC-------------- i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439644 40 - 192460366 -AGGACCCACGTCC-CTCCCAACCTGATCTCAATTAATTCAC-------------- i macFas5.chr2 C 0 I 40 s papAnu2.chr2 187359125 41 + 187378091 CAGAAGCCACGCCC-CTCCCCACCTGATCTCAGTTAATTCAC-------------- i papAnu2.chr2 T 44 C 0 s calJac3.chr17 73870305 56 + 74750902 CAGGAGCCAGGCCCTCTCCACGCCTGACCTCAATCAATCCTCCCTCGTGGGGCCAC i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=12334.000000 s hg38.chr3_KI270937v1_alt 82659 17 + 165607 TCACCAGGAGCCAGGTC s panTro4.chr3_GL389630_random 59986 17 - 103936 TCACCAGGATCCAGGTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869201 17 - 123690457 TCCCCAGGAGCCAGGTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439724 16 - 192460366 TCACC-AGAGCCACGTC i macFas5.chr2 I 40 C 0 s papAnu2.chr2 187359166 16 + 187378091 TCACA-GGACCTAGGTC i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73870361 17 + 74750902 TAACCAGGAgccaggcc i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=12625.000000 s hg38.chr3_KI270937v1_alt 82676 26 + 165607 CCTCCACACCGGG------TCTCAATTCACTC s panTro4.chr3_GL389630_random 60003 26 - 103936 CCTCCATACCGGA------TCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869218 26 - 123690457 CCTCCATACCTCA------TCTCAATTTATTC i nomLeu3.chr11 C 0 T 90 s macFas5.chr2 192439740 26 - 192460366 CCTCCCTACCTGA------TCTCAATTAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359182 32 + 187378091 TCTCCATACCTGGCTTAATTCTTACTATACTT i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=3820.000000 s hg38.chr3_KI270937v1_alt 82702 4 + 165607 ACTC s panTro4.chr3_GL389630_random 60029 4 - 103936 ACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 4 - 123690457 ACTC i nomLeu3.chr11 T 90 C 0 s macFas5.chr2 192439766 4 - 192460366 ACTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359214 4 + 187378091 ACTC i papAnu2.chr2 C 0 T 183 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=25096.000000 s hg38.chr3_KI270937v1_alt 82706 40 + 165607 GCCAGGAGCCAGTTCCCTCCATACCTCATCTCAATTAACT s panTro4.chr3_GL389630_random 60033 40 - 103936 ACCAGGAGACAGGTCCCTCCATAATGGATATCAGTTAACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869158 40 - 123690457 ACCAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439770 39 - 192460366 ACCA-GAGCCACGTCCCTCCCTACCTGATCTCAATTAATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359035 40 + 187378091 ACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATT i papAnu2.chr2 T 183 T 45 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=35628.000000 s hg38.chr3_KI270937v1_alt 82746 51 + 165607 CACTCACCAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60073 51 - 103936 CACTTACCAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869198 51 - 123690457 CACTCCCCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439809 46 - 192460366 ----CA-CAGGAGCCACGTCTCTCCCTACCTGATCTCAATTAATTCACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359030 51 + 187378091 CACTCACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 T 45 T 45 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=33824.000000 s hg38.chr3_KI270937v1_alt 82797 45 + 165607 CCAGGAGACAGGTCCCTCCATACATCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60124 45 - 103936 CCAGGAGCCAGGTCCCTCTATACCTGATCTCAATTCACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869249 45 - 123690457 CCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439855 45 - 192460366 CCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 45 + 187378091 CCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 T 45 I 44 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=12973.000000 s hg38.chr3_KI270937v1_alt 82842 43 + 165607 CCAGGAGCCAGGTCCCTCCACACCGGGTCTCAATTCACTCACT s panTro4.chr3_GL389630_random 60169 43 - 103936 CCAGGAGCCAGGTCCCTCCATAATGGATATCAGTTAACTCACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869294 40 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCTGG-CTTAATT--CTCACT i nomLeu3.chr11 C 0 T 132 s macFas5.chr2 192439900 42 - 192460366 -CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 44 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I a score=-852.000000 s hg38.chr3_KI270937v1_alt 82885 3 + 165607 CAC s panTro4.chr3_GL389630_random 60212 3 - 103936 TAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869202 3 - 123690457 CCC i nomLeu3.chr11 T 132 C 0 s macFas5.chr2 192439942 2 - 192460366 CA- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 44 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I a score=24559.000000 s hg38.chr3_KI270937v1_alt 82888 39 + 165607 CAGGCGCCAGGTCCCTCCACACCTCATCTCAATTAACTC s panTro4.chr3_GL389630_random 60215 39 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869205 39 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTC i nomLeu3.chr11 C 0 T 90 s macFas5.chr2 192439944 37 - 192460366 CAGGACCCACGTCCCTCCCAACCTGATCTCAATTAAT-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 39 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTC i papAnu2.chr2 I 44 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=18084.000000 s hg38.chr3_KI270937v1_alt 82927 28 + 165607 ACTCACCAGGAGCCAGGTCCCTCCATAC s panTro4.chr3_GL389630_random 60254 28 - 103936 ACTCACCAGGAGCCAGGTCCCTCCATAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 28 - 123690457 ACTCACCAGAAGCCAGGTCCCTCCATAC i nomLeu3.chr11 T 90 C 0 s macFas5.chr2 192439981 25 - 192460366 --TCA-CAGGACCCACGTCCCTCCCTAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359164 27 + 187378091 ACTCA-CAGGACCTAGGTCTCTCCATAC i papAnu2.chr2 C 0 T 66 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=7671.000000 s hg38.chr3_KI270937v1_alt 82955 17 + 165607 ATCATCTCAATTAACTC s panTro4.chr3_GL389630_random 60282 17 - 103936 CTGATCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869182 17 - 123690457 CTCATCTCAATTAACTC i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192440006 17 - 192460366 CTGATCTCAATTAATTC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359191 66 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=17270.000000 s hg38.chr3_KI270937v1_alt 82972 45 + 165607 ACTCACCAGGAGCCAGGTCCCTCCACACCGGGTCTCAATTCACTC s panTro4.chr3_GL389630_random 60299 45 - 103936 ACTCACCAGGATCCAGGTCCCTCCATACCGGGTCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 45 - 123690457 ACTCACCAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTC i nomLeu3.chr11 T 45 T 45 s macFas5.chr2 192440023 40 - 192460366 -----ACAGGACCCACGTCCCTCCCTACCTGATCTCAATTAATTC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359191 66 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=1173.000000 s hg38.chr3_KI270937v1_alt 83017 6 + 165607 ACTCAC s panTro4.chr3_GL389630_random 60344 6 - 103936 ACTCAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 6 - 123690457 ACTCAC i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192440063 5 - 192460366 ACTGA- i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359191 66 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=29278.000000 s hg38.chr3_KI270937v1_alt 83023 39 + 165607 CAGGCGCCAGGTCCCTCCACACCTCATCTCAATTAACTC s panTro4.chr3_GL389630_random 60350 39 - 103936 CAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869160 39 - 123690457 CAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTC i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192440068 39 - 192460366 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 39 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTC i papAnu2.chr2 T 66 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=3710.000000 s hg38.chr3_KI270937v1_alt 83062 7 + 165607 ACTCACC s panTro4.chr3_GL389630_random 60389 7 - 103936 AGTCACC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 7 - 123690457 ACTCACC i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192440107 7 - 192460366 ACTCACC i macFas5.chr2 C 0 T 430 s papAnu2.chr2 187359164 6 + 187378091 ACTCAC- i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=14972.000000 s hg38.chr3_KI270937v1_alt 83069 23 + 165607 AGGAGCCAGGTCCCTCCATACCT s panTro4.chr3_GL389630_random 60396 23 - 103936 AGGAGCCAGGTCCCTCCATAAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869161 23 - 123690457 AGAAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439684 23 - 192460366 AGGACCCACGTCCCTCCCTACCT i macFas5.chr2 T 430 C 0 s papAnu2.chr2 187359170 23 + 187378091 AGGACCTAGGTCTCTCCATACCT i papAnu2.chr2 C 0 T 68 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=9428.000000 s hg38.chr3_KI270937v1_alt 83092 21 + 165607 CATCTCAATTAACTCACTCAC s panTro4.chr3_GL389630_random 60419 21 - 103936 GATCTCAGTTAACTCACTCCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869184 21 - 123690457 CATCTCAATTAACTCACTCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439707 21 - 192460366 GATCTCAATTAATTCACTCAC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359193 68 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=43721.000000 s hg38.chr3_KI270937v1_alt 83113 65 + 165607 CAGGAGCCAAGTCCCTCCATACCTGATCTCAATTCACTCACTCACCAGGAGCCAGGTCCCTCCAT s panTro4.chr3_GL389630_random 60440 65 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCAT i panTro4.chr3_GL389630_random C 0 I 135 s nomLeu3.chr11 2869205 65 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTACCAGGAGCCAGGTCCCTCCAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439728 63 - 192460366 CAG-AGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACTCACC-AGAGCCACGTCCCTCCCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 64 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCACA-GGACCTAGGTCTCTCCAT i papAnu2.chr2 T 68 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=8577.000000 s hg38.chr3_KI270937v1_alt 83178 24 + 165607 ACCTCA------TCTCAATTCACTCACTCA s panTro4.chr3_GL389630_random 60640 24 - 103936 AATGGA------TCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random I 135 C 0 s nomLeu3.chr11 2869270 24 - 123690457 ACCTCA------TCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439791 21 - 192460366 ACCTGA------TCTCAATTAATTCAC--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359189 30 + 187378091 ACCTGGCTTAATTCTTACTATACTTACTCA i papAnu2.chr2 C 0 T 183 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=17367.000000 s hg38.chr3_KI270937v1_alt 83202 25 + 165607 CCAGGAGACAGGTCCCTCCATACCT s panTro4.chr3_GL389630_random 60664 25 - 103936 CCAGGAGCCAGGCCTCTCCATACCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869294 25 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCT i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192439812 23 - 192460366 --AGGAGCCACGTCTCTCCCTACCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 25 + 187378091 CCAGGAGCCACGTCCCTCCCTACCT i papAnu2.chr2 T 183 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=14853.000000 s hg38.chr3_KI270937v1_alt 83227 20 + 165607 CATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60689 20 - 103936 GATCTCAGTTACCTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869274 20 - 123690457 CATCTCAATTAACTCACTCA i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192439835 20 - 192460366 GATCTCAATTAATTCACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359061 20 + 187378091 GATCTCAATTAATTCATTCA i papAnu2.chr2 C 0 I 41 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=5196.000000 s hg38.chr3_KI270937v1_alt 83247 10 + 165607 CCAGGAGCCA s panTro4.chr3_GL389630_random 60709 10 - 103936 CCAGTAGCCA i panTro4.chr3_GL389630_random C 0 T 214 s nomLeu3.chr11 2869294 10 - 123690457 CCAGGAGCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439855 10 - 192460366 CCAGGAGCCA i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 41 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1163.000000 s hg38.chr3_KI270937v1_alt 83257 11 + 165607 AGTCCCTCCAC s nomLeu3.chr11 2869304 11 - 123690457 GGCCTCTCCAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439865 11 - 192460366 CGTCCCTCCCT i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 41 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I e panTro4.chr3_GL389630_random 60719 214 - 103936 T a score=720.000000 s hg38.chr3_KI270937v1_alt 83268 6 + 165607 ACCGAG s panTro4.chr3_GL389630_random 60505 6 - 103936 AATGGA i panTro4.chr3_GL389630_random T 214 C 0 s nomLeu3.chr11 2869315 6 - 123690457 ACCTGG i nomLeu3.chr11 C 0 T 167 s macFas5.chr2 192439876 6 - 192460366 ACCTGA i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 41 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I a score=2723.000000 s hg38.chr3_KI270937v1_alt 83274 13 + 165607 TCTCAATTAACTC s panTro4.chr3_GL389630_random 60511 13 - 103936 TATCAGTTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192439882 13 - 192460366 TCTCAATTAATTC i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 41 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I e nomLeu3.chr11 2869321 167 - 123690457 T a score=1692.000000 s hg38.chr3_KI270937v1_alt 83287 3 + 165607 ACT s panTro4.chr3_GL389630_random 60524 3 - 103936 ACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 3 - 123690457 ACT i nomLeu3.chr11 T 167 C 0 s macFas5.chr2 192439895 3 - 192460366 ACT i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 41 + 187378091 I e rheMac3.chr2 192587753 39 + 192599291 I a score=28925.000000 s hg38.chr3_KI270937v1_alt 83290 42 + 165607 TGCCAGGAGCCAGGTCCCTCCATACCGGGTCTCAATTAACTC s panTro4.chr3_GL389630_random 60527 42 - 103936 TACCAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869157 42 - 123690457 CACCAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTC i nomLeu3.chr11 C 0 T 45 s macFas5.chr2 192439898 41 - 192460366 -GACAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359122 42 + 187378091 GGACAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTC i papAnu2.chr2 I 41 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=24936.000000 s hg38.chr3_KI270937v1_alt 83332 50 + 165607 ACTCACCAGGAGCCAGGTCCCTCCATACCTCA------TCTCAATTCACTCACTCA s panTro4.chr3_GL389630_random 60569 50 - 103936 ACTCACCAGGATCCAGGTCCCTCCATACCGGA------TCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 50 - 123690457 ACTCACCAGAAGCCAGGTCCCTCCATACCTCA------TCTCAATTAACTCACTCC i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192439939 46 - 192460366 ACCCA-CAGGACCCACGTCCCTCCCAACCTGA------TCTCAATTAATTCAC--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359164 55 + 187378091 ACTCA-CAGGACCTAGGTCTCTCCATACCTGGCTTAATTCTTACTATACTTACTCA i papAnu2.chr2 C 0 T 183 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=4587.000000 s hg38.chr3_KI270937v1_alt 83382 8 + 165607 CCAGGAGA s panTro4.chr3_GL389630_random 60619 8 - 103936 CCAGGAGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869204 8 - 123690457 CCAGGAGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439985 6 - 192460366 --AGGACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 8 + 187378091 CCAGGAGC i papAnu2.chr2 T 183 C 0 e ponAbe2.chr3 2407826 0 - 202140232 C e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=37279.000000 s hg38.chr3_KI270937v1_alt 83390 37 + 165607 CAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60627 37 - 103936 CAGGTCCCTCCATAATGGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407826 37 - 202140232 CAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869212 37 - 123690457 CAGGTCCCTCCATACCTCATCTCAATTTATTCACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439991 34 - 192460366 CACGTCCCTCCCTACCTGATCTCAATTAATTCAC--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359044 37 + 187378091 CACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 C 0 I 44 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=600.000000 s hg38.chr3_KI270937v1_alt 83427 1 + 165607 C s panTro4.chr3_GL389630_random 60664 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407863 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869249 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e papAnu2.chr2 187359081 44 + 187378091 I e macFas5.chr2 192440025 0 - 192460366 C e rheMac3.chr2 192587753 39 + 192599291 I a score=24130.000000 s hg38.chr3_KI270937v1_alt 83428 25 + 165607 CAGGAGCCAGGTCCCCCCACACCTC s panTro4.chr3_GL389630_random 60665 25 - 103936 CAGGAGCCAGGCCTCTCCATACCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407864 25 - 202140232 CAGGAGCCAGGTCCCTCCATAACTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869250 25 - 123690457 CAGGAGCCAGGTCCCTCCATACCTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440025 24 - 192460366 -AGGACCCACGTCCCTCCCTACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 25 + 187378091 CAGAAGCCACGCCCCTCCCCACCTG i papAnu2.chr2 I 44 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91384164 971 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=59133.000000 s hg38.chr3_KI270937v1_alt 83453 45 + 165607 ATCTCAATTAACTCACTCACCAGGAGTCAGGTCCCTCCATACCTG s panTro4.chr3_GL389630_random 60690 45 - 103936 ATCTCAGTTACCTCACTCACCAGTAGCCAGGCCTCTccagacctg i panTro4.chr3_GL389630_random C 0 T 225 s ponAbe2.chr3 2407889 45 - 202140232 ATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCACACCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869275 45 - 123690457 ATCTCAATTAACTCACTCACCAGGAGCCAGGCCTCTCCAGACCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440049 44 - 192460366 ATCTCAATTAATTCACTGA-CAGGAGCCACGTCCCTCCCTACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359150 44 + 187378091 ATCTCAGTTAATTCACTCA-CAGGACCTAGGTCTCTCCATACCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385135 44 + 91754291 ATCTCAATTCATTCACTCA-CCGGAGTCACGCCCCTCCCTACCCG i chlSab2.chr15 I 971 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e rheMac3.chr2 192587753 39 + 192599291 I a score=6136.000000 s hg38.chr3_KI270937v1_alt 83498 14 + 165607 A------TCTCAATTCACTC s panTro4.chr3_GL389630_random 60510 14 - 103936 A------TATCAGTTAACTC i panTro4.chr3_GL389630_random T 225 C 0 s ponAbe2.chr3 2407934 14 - 202140232 A------TCTCAATTAACTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869320 11 - 123690457 -------GCTTAATTCTC-- i nomLeu3.chr11 C 0 T 177 s macFas5.chr2 192440093 14 - 192460366 A------TCTCAATTAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359194 20 + 187378091 GCTTAATTCTTACTATACTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385179 14 + 91754291 A------TCTCAATTCATTC i chlSab2.chr15 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e rheMac3.chr2 192587753 39 + 192599291 I a score=9147.000000 s hg38.chr3_KI270937v1_alt 83512 5 + 165607 ACTCA s panTro4.chr3_GL389630_random 60524 5 - 103936 ACTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407948 5 - 202140232 ACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869154 5 - 123690457 ACTCA i nomLeu3.chr11 T 177 C 0 s macFas5.chr2 192440107 5 - 192460366 ACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359214 5 + 187378091 ACTCA i papAnu2.chr2 C 0 T 94 s chlSab2.chr15 91385193 5 + 91754291 ACTCA i chlSab2.chr15 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1500.000000 s hg38.chr3_KI270937v1_alt 83517 1 + 165607 C s panTro4.chr3_GL389630_random 60529 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407953 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869159 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440112 1 - 192460366 C i macFas5.chr2 C 0 C 0 s chlSab2.chr15 91385198 1 + 91754291 C i chlSab2.chr15 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e papAnu2.chr2 187359219 94 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=45940.000000 s hg38.chr3_KI270937v1_alt 83518 31 + 165607 CAGGAGCCAGGTCCCTCCATACCTCATCTCA s panTro4.chr3_GL389630_random 60530 31 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407954 31 - 202140232 CAGGAGCCAGGTCCCTCCATACCTCATCTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869160 31 - 123690457 CAGAAGCCAGGTCCCTCCATACCTCATCTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440113 30 - 192460366 CAG-AGCCACGTCCCTCCCTACCTGATCTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 31 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCA i papAnu2.chr2 T 94 C 0 s chlSab2.chr15 91385199 30 + 91754291 CGG-AGCCACGCCCCTCCCTACCTGATCTCA i chlSab2.chr15 C 0 I 20 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e rheMac3.chr2 192587753 39 + 192599291 I a score=14373.000000 s hg38.chr3_KI270937v1_alt 83549 13 + 165607 GTTAACTCACTCA s panTro4.chr3_GL389630_random 60561 13 - 103936 ATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407985 13 - 202140232 GTTAATTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869191 13 - 123690457 ATTAACTCACTCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440143 13 - 192460366 ATTAATTCACCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359156 13 + 187378091 GTTAATTCACTCA i papAnu2.chr2 C 0 T 44 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1000.000000 s hg38.chr3_KI270937v1_alt 83562 1 + 165607 C s panTro4.chr3_GL389630_random 60574 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407998 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869204 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440156 1 - 192460366 C i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359169 44 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=45762.000000 s hg38.chr3_KI270937v1_alt 83563 44 + 165607 CAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60575 44 - 103936 CAGGATCCAGGTCCCTCCATACCGGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2407999 44 - 202140232 CAGGAGCCAGGTCGCTCCATAACTTATCTCAGTTAACTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869205 44 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440157 43 - 192460366 -AGGAGCCACGTCTCTCCCTACCTGATCTCAATTAATTCACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 44 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCA i papAnu2.chr2 T 44 T 44 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=1000.000000 s hg38.chr3_KI270937v1_alt 83607 1 + 165607 C s panTro4.chr3_GL389630_random 60619 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408043 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869249 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440200 1 - 192460366 C i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359169 44 + 187378091 T e rheMac3.chr2 192587753 39 + 192599291 I a score=49141.000000 s hg38.chr3_KI270937v1_alt 83608 44 + 165607 CAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60620 44 - 103936 CAGGAGACAGGTCCCTCCATAATGGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408044 44 - 202140232 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869250 44 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440201 44 - 192460366 CAGGAGCCACGTCCCTCCCCACCTGATCTCAATTAATTCACCCA i macFas5.chr2 C 0 I 438 s papAnu2.chr2 187359125 44 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCA i papAnu2.chr2 T 44 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=600.000000 s hg38.chr3_KI270937v1_alt 83652 1 + 165607 C s panTro4.chr3_GL389630_random 60664 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408088 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869294 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359169 0 + 187378091 C e macFas5.chr2 192440245 438 - 192460366 I e rheMac3.chr2 192587753 39 + 192599291 I a score=12933.000000 s hg38.chr3_KI270937v1_alt 83653 12 + 165607 CAGGAGCCAGGT s panTro4.chr3_GL389630_random 60665 12 - 103936 CAGGAGCCAGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408089 12 - 202140232 CAGGAGCCAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869295 12 - 123690457 CAGGAGCCAGGC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440683 12 - 192460366 TAGGAGCCACGT i macFas5.chr2 I 438 C 0 s papAnu2.chr2 187359169 12 + 187378091 CAGGACCTAGGT i papAnu2.chr2 C 0 T 44 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=24815.000000 s hg38.chr3_KI270937v1_alt 83665 30 + 165607 CCCTCCACACCTCATCTCAATTCACTCACT s panTro4.chr3_GL389630_random 60677 30 - 103936 CTCTCCATACCTGATCTCAGTTACCTCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408101 30 - 202140232 CCCTCCATATCTGATCTCAATTAATTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869307 27 - 123690457 CTCTCCAGACCTGG-CTTAATT--CTCACT i nomLeu3.chr11 C 0 T 42 s macFas5.chr2 192440695 30 - 192460366 CTCTCCCTACCTGATCTCAATTAATTCACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359137 30 + 187378091 CCCTCCCCACCTGATCTCAGTTAATTCACT i papAnu2.chr2 T 44 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=25.000000 s hg38.chr3_KI270937v1_alt 83695 3 + 165607 CAC s panTro4.chr3_GL389630_random 60707 3 - 103936 CAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408131 3 - 202140232 CAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869292 3 - 123690457 CAC i nomLeu3.chr11 T 42 C 0 s macFas5.chr2 192440725 2 - 192460366 CA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359167 2 + 187378091 CA- i papAnu2.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587753 39 + 192599291 I a score=32675.000000 s hg38.chr3_KI270937v1_alt 83698 25 + 165607 CAGGAGCCAGGTCCCTCCATACCTG s panTro4.chr3_GL389630_random 60710 25 - 103936 CAGTAGCCAGGCCTCTccagacctg i panTro4.chr3_GL389630_random C 0 T 90 s ponAbe2.chr3 2408134 25 - 202140232 CAGGAGCCAGGTCCCTTCATACTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869295 25 - 123690457 CAGGAGCCAGGCCTCTCCAGACCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192587792 25 + 192599291 CAGGACCCACGTCCCTCCCTACCTG i rheMac3.chr2 I 39 C 0 s macFas5.chr2 192440727 25 - 192460366 CAGGAGCCACGTCCCTCGCCACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359169 25 + 187378091 CAGGACCTAGGTCTCTCCATACCTG i papAnu2.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I a score=15466.000000 s hg38.chr3_KI270937v1_alt 83723 17 + 165607 A------TCTCAATTCACTCACT s panTro4.chr3_GL389630_random 60645 17 - 103936 A------TCTCAATTAACTCACT i panTro4.chr3_GL389630_random T 90 C 0 s ponAbe2.chr3 2408159 17 - 202140232 A------TCTCAATTAACTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869320 14 - 123690457 -------GCTTAATT--CTCACT i nomLeu3.chr11 C 0 T 42 s rheMac3.chr2 192587817 17 + 192599291 A------TCTCAATTAATTCACT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440752 17 - 192460366 A------TCTCAATTAATTCACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359194 23 + 187378091 GCTTAATTCTTACTATACTTACT i papAnu2.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I a score=4011.000000 s hg38.chr3_KI270937v1_alt 83740 2 + 165607 CA s panTro4.chr3_GL389630_random 60662 2 - 103936 CA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408176 2 - 202140232 CA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869292 2 - 123690457 CA i nomLeu3.chr11 T 42 C 0 s rheMac3.chr2 192587834 2 + 192599291 CA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440769 2 - 192460366 CA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359217 2 + 187378091 CA i papAnu2.chr2 C 0 T 189 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I a score=29155.000000 s hg38.chr3_KI270937v1_alt 83742 25 + 165607 CCAGGAGCCAGGTCCCTCCATACCT s panTro4.chr3_GL389630_random 60664 25 - 103936 CCAGGAGCCAGGCCTCTCCATACCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408178 25 - 202140232 CCAGGAGCCAGGTCCCTCCATACCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869294 25 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCT i nomLeu3.chr11 C 0 T 45 s rheMac3.chr2 192587836 25 + 192599291 CCAGGAGCCACGTCCCTCCCTACCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440771 24 - 192460366 -CAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T a score=19890.000000 s hg38.chr3_KI270937v1_alt 83767 18 + 165607 CATCTCAATTAACTCACT s panTro4.chr3_GL389630_random 60689 18 - 103936 GATCTCAGTTACCTCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408203 18 - 202140232 CATCTCAATTATCTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869274 18 - 123690457 CATCTCAATTAACTCACT i nomLeu3.chr11 T 45 C 0 s rheMac3.chr2 192587861 18 + 192599291 GATCTCAATTAATTCACT i rheMac3.chr2 C 0 I 174 s macFas5.chr2 192440795 18 - 192460366 GATCTCAATTAATTCACT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T a score=17702.000000 s hg38.chr3_KI270937v1_alt 83785 27 + 165607 CACCAGGAGACAGGTCCCTCCACACCT s panTro4.chr3_GL389630_random 60707 27 - 103936 CACCAGTAGCCAGGCCTCTccagacct i panTro4.chr3_GL389630_random C 0 T 450 s ponAbe2.chr3 2408221 27 - 202140232 CACCAGGAGCTAGGTCCCTCCACATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869292 27 - 123690457 CACCAGGAGCCAGGCCTCTCCAGACCT i nomLeu3.chr11 C 0 T 90 s macFas5.chr2 192440813 27 - 192460366 GACCAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=9558.000000 s hg38.chr3_KI270937v1_alt 83812 14 + 165607 CATCTCAATTCACT s panTro4.chr3_GL389630_random 60284 14 - 103936 GATCTCAATTAACT i panTro4.chr3_GL389630_random T 450 C 0 s ponAbe2.chr3 2408248 14 - 202140232 GATCTCAATTAATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869229 14 - 123690457 CATCTCAATTTATT i nomLeu3.chr11 T 90 C 0 s macFas5.chr2 192440840 14 - 192460366 GATCTCAATTAATT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=48772.000000 s hg38.chr3_KI270937v1_alt 83826 49 + 165607 CACTCACCAGGAGCCAAGTCCCTCCATACCTGATCTCAATTCACTCACT s panTro4.chr3_GL389630_random 60298 49 - 103936 CACTCACCAGGATCCAGGTCCCTCCATACCGGGTCTCAATTAACTCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408262 49 - 202140232 CACTCACCAGGAGCCAGGTCCCTCCATACCGGATCTCAATTAACTCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869243 49 - 123690457 CACTTACCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440854 45 - 192460366 CACTCA-CAGGACCTAGGTCTCTCCATACCTGG-CTTAATT--CTCACT i macFas5.chr2 C 0 T 351 s papAnu2.chr2 187359030 49 + 187378091 CACTCACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATT i papAnu2.chr2 T 189 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=2865.000000 s hg38.chr3_KI270937v1_alt 83875 2 + 165607 CA s panTro4.chr3_GL389630_random 60347 2 - 103936 CA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408311 2 - 202140232 CA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869292 2 - 123690457 CA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440548 2 - 192460366 CA i macFas5.chr2 T 351 C 0 s papAnu2.chr2 187359079 2 + 187378091 CA i papAnu2.chr2 C 0 T 51 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=18886.000000 s hg38.chr3_KI270937v1_alt 83877 25 + 165607 CCAGGAGACAGGTCCCTCCACACCT s panTro4.chr3_GL389630_random 60349 25 - 103936 CCAGGAGCCAGGTCCCTCCACACCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408313 25 - 202140232 CCAGGAGCCAGGTCCCTCCATACCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869294 25 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCT i nomLeu3.chr11 C 0 T 165 s macFas5.chr2 192440550 25 - 192460366 CCAGGAGCCACATCCCTCCCCACCT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=6411.000000 s hg38.chr3_KI270937v1_alt 83902 15 + 165607 CATCTCAATTCACTC s panTro4.chr3_GL389630_random 60374 15 - 103936 CATCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408338 15 - 202140232 CATCTCAACTAACTc i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192440575 15 - 192460366 GATCTCAATTAATTC i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I e nomLeu3.chr11 2869319 165 - 123690457 T a score=3342.000000 s hg38.chr3_KI270937v1_alt 83917 5 + 165607 ACTCA s panTro4.chr3_GL389630_random 60389 5 - 103936 AGTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408353 5 - 202140232 actca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869154 5 - 123690457 ACTCA i nomLeu3.chr11 T 165 C 0 s macFas5.chr2 192440590 5 - 192460366 ACCCA i macFas5.chr2 C 0 I 176 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=600.000000 s hg38.chr3_KI270937v1_alt 83922 1 + 165607 C s panTro4.chr3_GL389630_random 60394 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408358 1 - 202140232 c i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869159 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e macFas5.chr2 192440595 176 - 192460366 I e rheMac3.chr2 192587879 174 + 192599291 I a score=15341.000000 s hg38.chr3_KI270937v1_alt 83923 24 + 165607 CAGGAGACAGGTCCCCCCACACCT s panTro4.chr3_GL389630_random 60395 24 - 103936 CAGGAGCCAGGTCCCTCCATAAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408359 24 - 202140232 caggagccaggcccctccagacct i ponAbe2.chr3 C 0 T 135 s nomLeu3.chr11 2869160 24 - 123690457 CAGAAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440771 24 - 192460366 CAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 I 176 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=9647.000000 s hg38.chr3_KI270937v1_alt 83947 14 + 165607 CATCTCAATTCACT s panTro4.chr3_GL389630_random 60419 14 - 103936 GATCTCAGTTAACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408248 14 - 202140232 GATCTCAATTAATT i ponAbe2.chr3 T 135 C 0 s nomLeu3.chr11 2869184 14 - 123690457 CATCTCAATTAACT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440795 14 - 192460366 GATCTCAATTAATT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 51 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=7339.000000 s hg38.chr3_KI270937v1_alt 83961 7 + 165607 CACTCAC s panTro4.chr3_GL389630_random 60433 7 - 103936 CACTCCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408262 7 - 202140232 CACTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869198 7 - 123690457 CACTCCC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440809 7 - 192460366 CACTGAC i macFas5.chr2 C 0 T 571 s papAnu2.chr2 187359030 7 + 187378091 CACTCAC i papAnu2.chr2 T 51 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=50745.000000 s hg38.chr3_KI270937v1_alt 83968 44 + 165607 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTCACTCACTCA s panTro4.chr3_GL389630_random 60440 44 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408269 44 - 202140232 CAGGAGCCAGGTCCCTCCATACCGGATCTCAATTAACTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869205 44 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440245 44 - 192460366 CAGGACCCACGTCTCTCCCTACCTGATCTCAATTAATTCACCCA i macFas5.chr2 T 571 C 0 s papAnu2.chr2 187359037 44 + 187378091 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 C 0 T 45 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=44095.000000 s hg38.chr3_KI270937v1_alt 84012 45 + 165607 CCAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60484 45 - 103936 CCAGGAGCCAGGTCCCTCCATAATGGATATCAGTTAACTCACTTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408313 45 - 202140232 CCAGGAGCCAGGTCCCTCCATACCTCATCTCAACTAACTcactca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869249 45 - 123690457 CCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440289 40 - 192460366 -CAGGACCCACGTCCCTCCCAACCTGATCTCAATTAATTCA---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 45 + 187378091 CCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 T 45 T 45 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=28955.000000 s hg38.chr3_KI270937v1_alt 84057 26 + 165607 CCAGGAGCCAAGTCCCTCCATACCTG s panTro4.chr3_GL389630_random 60529 26 - 103936 CCAGGAGCCAGGTCCCTCCATACCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408358 26 - 202140232 ccaggagccaggcccctccagacctg i ponAbe2.chr3 C 0 T 270 s nomLeu3.chr11 2869294 26 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440329 25 - 192460366 -CAGGACCCACGTCCCTCCCTACCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 26 + 187378091 CCAGGAGCCACGTCCCTCCCTACCTG i papAnu2.chr2 T 45 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=10004.000000 s hg38.chr3_KI270937v1_alt 84083 10 + 165607 ATCTCAATTC s panTro4.chr3_GL389630_random 60555 10 - 103936 ATCTCAATTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408114 10 - 202140232 ATCTCAATTA i ponAbe2.chr3 T 270 C 0 s nomLeu3.chr11 2869320 9 - 123690457 -GCTTAATTC i nomLeu3.chr11 C 0 T 177 s macFas5.chr2 192440354 10 - 192460366 ATCTCAATTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359062 10 + 187378091 ATCTCAATTA i papAnu2.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=1097.000000 s hg38.chr3_KI270937v1_alt 84093 2 + 165607 AC s panTro4.chr3_GL389630_random 60565 2 - 103936 AC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408124 2 - 202140232 AT i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192440364 2 - 192460366 AT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359072 2 + 187378091 AT i papAnu2.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I e nomLeu3.chr11 2869329 177 - 123690457 T a score=611.000000 s hg38.chr3_KI270937v1_alt 84095 2 + 165607 TG s panTro4.chr3_GL389630_random 60567 2 - 103936 TC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408126 2 - 202140232 TC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869152 2 - 123690457 TG i nomLeu3.chr11 T 177 C 0 s macFas5.chr2 192440366 2 - 192460366 TA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359074 2 + 187378091 TC i papAnu2.chr2 C 0 I 49 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=3820.000000 s hg38.chr3_KI270937v1_alt 84097 4 + 165607 ACTC s panTro4.chr3_GL389630_random 60569 4 - 103936 ACTC i panTro4.chr3_GL389630_random C 0 T 630 s ponAbe2.chr3 2408128 4 - 202140232 ACTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869154 4 - 123690457 ACTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440368 4 - 192460366 ACTC i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359076 49 + 187378091 I e rheMac3.chr2 192587879 174 + 192599291 I a score=1910.000000 s hg38.chr3_KI270937v1_alt 84101 2 + 165607 AC s panTro4.chr3_GL389630_random 59943 2 - 103936 AC i panTro4.chr3_GL389630_random T 630 C 0 s ponAbe2.chr3 2408132 2 - 202140232 AC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869158 2 - 123690457 AC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440372 2 - 192460366 AC i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359076 49 + 187378091 I e rheMac3.chr2 192587879 174 + 192599291 I a score=73331.000000 s hg38.chr3_KI270937v1_alt 84103 69 + 165607 CAGGAGCCAGATCCCTCCATACCTCATCTCAATTAACTCACTCACCAGGAGACAGGTCCCTCCATACCT s panTro4.chr3_GL389630_random 59945 69 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCACCAGGATCCAGGTCCCTCCATACCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408134 69 - 202140232 CAGGAGCCAGGTCCCTTCATACTGGATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCATACCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869160 69 - 123690457 CAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCCCCAGGAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440374 68 - 192460366 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACCCA-CAGGAGCCACGTCTCTCCCTACCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 68 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCA-CAGGACCTAGGTCTCTCCATACCT i papAnu2.chr2 I 49 T 68 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192587879 174 + 192599291 I a score=9243.000000 s hg38.chr3_KI270937v1_alt 84172 14 + 165607 CATCTCAATTAACT s panTro4.chr3_GL389630_random 60014 14 - 103936 GATCTCAATTAACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408203 14 - 202140232 CATCTCAATTATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869229 14 - 123690457 CATCTCAATTTATT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440442 14 - 192460366 GATCTCAATTAATT i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359193 68 + 187378091 T e rheMac3.chr2 192587879 174 + 192599291 I a score=9440.000000 s hg38.chr3_KI270937v1_alt 84186 7 + 165607 CACTCAC s panTro4.chr3_GL389630_random 60028 7 - 103936 CACTCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408217 7 - 202140232 CACTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869243 7 - 123690457 CACTTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588053 7 + 192599291 CACTCAC i rheMac3.chr2 I 174 C 0 s macFas5.chr2 192440456 7 - 192460366 CACTCAC i macFas5.chr2 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359193 68 + 187378091 T a score=62218.000000 s hg38.chr3_KI270937v1_alt 84193 49 + 165607 CAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCACTCACCAGG s panTro4.chr3_GL389630_random 60035 49 - 103936 CAGGAGACAGGTCCCTCCATAATGGATATCAGTTAACTCACTTACCAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408224 49 - 202140232 CAGGAGCTAGGTCCCTCCACATCTGATCTCAATTAATTCACTCACCAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869250 49 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCACCAGG i nomLeu3.chr11 C 0 T 90 s rheMac3.chr2 192588060 48 + 192599291 CAGGAGCCACGTCCCTCCCCACCTGATCTCAATTAATTCACCCACAGG- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440463 47 - 192460366 CA-GAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACCCACAGG- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 48 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCACAGG- i papAnu2.chr2 T 68 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I a score=43505.000000 s hg38.chr3_KI270937v1_alt 84242 30 + 165607 AGCCAAGTCCCTCCATACCTGATCTCAATT s panTro4.chr3_GL389630_random 60084 30 - 103936 AGCCAGGTCCCTCCATACCTGATCTCAATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408273 30 - 202140232 AGCCAGGTCCCTCCATACCGGATCTCAATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869209 30 - 123690457 AGCCAGGTCCCTCCATACCTCATCTCAATT i nomLeu3.chr11 T 90 C 0 s rheMac3.chr2 192588108 30 + 192599291 AGCCACGTCTCTCCCCACCTGATCTCAATT i rheMac3.chr2 C 0 I 315 s macFas5.chr2 192440510 30 - 192460366 AGCCACGTCTCTCCTTACCTGATCTCAATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359173 29 + 187378091 ACCTAGGTCTCTCCATACCTGG-CTTAATT i papAnu2.chr2 C 0 I 7 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I a score=9680.000000 s hg38.chr3_KI270937v1_alt 84272 10 + 165607 CACTCACTCA s panTro4.chr3_GL389630_random 60114 10 - 103936 AACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408303 10 - 202140232 AACTCACTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869239 10 - 123690457 TATTCACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440540 10 - 192460366 AATTCACTCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359209 10 + 187378091 TACTTACTCA i papAnu2.chr2 I 7 T 189 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=35238.000000 s hg38.chr3_KI270937v1_alt 84282 45 + 165607 CCAGGAGACAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60124 45 - 103936 CCAGGAGCCAGGTCCCTCTATACCTGATCTCAATTCACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408313 45 - 202140232 CCAGGAGCCAGGTCCCTCCATACCTCATCTCAACTAACTcactca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869249 45 - 123690457 CCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440550 45 - 192460366 CCAGGAGCCACATCCCTCCCCACCTGATCTCAATTAATTCACCCA i macFas5.chr2 C 0 T 133 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192588138 315 + 192599291 I a score=13773.000000 s hg38.chr3_KI270937v1_alt 84327 20 + 165607 CCAGGAGACAGGTCCCTCCA s panTro4.chr3_GL389630_random 60169 20 - 103936 CCAGGAGCCAGGTCCCTCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408358 20 - 202140232 ccaggagccaggcccctcca i ponAbe2.chr3 C 0 I 40 s nomLeu3.chr11 2869294 20 - 123690457 CCAGGAGCCAGGCCTCTCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440462 19 - 192460366 -CCAGAGCCACGTCCCTCCC i macFas5.chr2 T 133 C 0 e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192588138 315 + 192599291 I a score=789.000000 s hg38.chr3_KI270937v1_alt 84347 7 + 165607 CACCGGG s panTro4.chr3_GL389630_random 60189 7 - 103936 TAATGGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869314 7 - 123690457 GACCTGG i nomLeu3.chr11 C 0 T 90 s macFas5.chr2 192440481 7 - 192460366 TACCTGA i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192588138 315 + 192599291 I a score=4213.000000 s hg38.chr3_KI270937v1_alt 84354 12 + 165607 TCTCAATTCACT s panTro4.chr3_GL389630_random 60196 12 - 103936 TATCAGTTAACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869231 12 - 123690457 TCTCAATTTATT i nomLeu3.chr11 T 90 C 0 s macFas5.chr2 192440488 12 - 192460366 TCTCAATTAATT i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359219 189 + 187378091 T e rheMac3.chr2 192588138 315 + 192599291 I a score=4447.000000 s hg38.chr3_KI270937v1_alt 84366 6 + 165607 CACTCA s panTro4.chr3_GL389630_random 60208 6 - 103936 CACTTA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869243 6 - 123690457 CACTTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440500 6 - 192460366 CACCCA i macFas5.chr2 C 0 I 89 s papAnu2.chr2 187359030 6 + 187378091 CACTCA i papAnu2.chr2 T 189 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=600.000000 s hg38.chr3_KI270937v1_alt 84372 1 + 165607 C s panTro4.chr3_GL389630_random 60214 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869249 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187359036 1 + 187378091 C i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e macFas5.chr2 192440506 89 - 192460366 I e rheMac3.chr2 192588138 315 + 192599291 I a score=34424.000000 s hg38.chr3_KI270937v1_alt 84373 44 + 165607 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTCACTCACTCA s panTro4.chr3_GL389630_random 60215 44 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869250 44 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440595 44 - 192460366 TAGGAGCCACGTCTCTCCCTACCTGATCTCAATTAATTCACCCA i macFas5.chr2 I 89 C 0 s papAnu2.chr2 187359037 44 + 187378091 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 C 0 T 45 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=17469.000000 s hg38.chr3_KI270937v1_alt 84417 27 + 165607 CCAGGAGCCAAGTCCCTCCACACCGAG s panTro4.chr3_GL389630_random 60259 27 - 103936 CCAGGAGCCAGGTCCCTCCATACCTGA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869294 27 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCTGG i nomLeu3.chr11 C 0 T 167 s macFas5.chr2 192440639 26 - 192460366 -CAGGAGCCACGTCCCTCGCCACCTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359036 27 + 187378091 CCAGGAGCCACGTCCCTCCCTACCTGA i papAnu2.chr2 T 45 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=6181.000000 s hg38.chr3_KI270937v1_alt 84444 12 + 165607 TCTCAATTAACT s panTro4.chr3_GL389630_random 60286 12 - 103936 TCTCAATTAACT i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192440665 12 - 192460366 TCTCAATTAATT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359063 12 + 187378091 TCTCAATTAATT i papAnu2.chr2 C 0 T 45 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869321 167 - 123690457 T a score=600.000000 s hg38.chr3_KI270937v1_alt 84456 1 + 165607 C s panTro4.chr3_GL389630_random 60298 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192440677 1 - 192460366 C i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359030 1 + 187378091 C i papAnu2.chr2 T 45 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869321 167 - 123690457 T a score=31079.000000 s hg38.chr3_KI270937v1_alt 84457 45 + 165607 ACTCACTAGGAGCCAAGTCCCTCCATACCTGATCTCAATTCACTC s panTro4.chr3_GL389630_random 60299 45 - 103936 ACTCACCAGGATCCAGGTCCCTCCATACCGGGTCTCAATTAACTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 45 - 123690457 ACTCACCAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTC i nomLeu3.chr11 T 167 T 45 s macFas5.chr2 192440678 44 - 192460366 ACCCA-TAGGAGCCACGTCTCTCCCTACCTGATCTCAATTAATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359031 45 + 187378091 ACTCACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTC i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=3718.000000 s hg38.chr3_KI270937v1_alt 84502 5 + 165607 ACTCA s panTro4.chr3_GL389630_random 60344 5 - 103936 ACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 5 - 123690457 ACTCA i nomLeu3.chr11 T 45 C 0 s macFas5.chr2 192440722 5 - 192460366 ACCCA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359076 5 + 187378091 ATTCA i papAnu2.chr2 C 0 I 44 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=300.000000 s hg38.chr3_KI270937v1_alt 84507 1 + 165607 C s panTro4.chr3_GL389630_random 60349 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869159 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 44 + 187378091 I e macFas5.chr2 192440727 0 - 192460366 C e rheMac3.chr2 192588138 315 + 192599291 I a score=44945.000000 s hg38.chr3_KI270937v1_alt 84508 69 + 165607 CAGGAGACAGGTCCCTCCACACCTCATCTCAATTAACTCACTCACCAGGAGACAGGTCCCTCCATACCT s panTro4.chr3_GL389630_random 60350 69 - 103936 CAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCAGTCACCAGGAGCCAGGTCCCTCCATAAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869160 69 - 123690457 CAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCCCCAGGAGCCAGGTCCCTCCATACCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440727 68 - 192460366 CAGGAGCCACGTCCCTCGCCACCTGATCTCAATTAATTCACCCA-CAGGAGCCACGTCCCTCCCTACCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359125 68 + 187378091 CAGAAGCCACGCCCCTCCCCACCTGATCTCAGTTAATTCACTCA-CAGGACCTAGGTCTCTCCATACCT i papAnu2.chr2 I 44 T 163 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=36522.000000 s hg38.chr3_KI270937v1_alt 84577 88 + 165607 CATCTCAATTCACTCACTCACCAGGAGCCAAGTCCCTCCACACCGGGTCTCAATTAAATCACTCGCCAGGAGCCAGGTCCCTCCATAC s panTro4.chr3_GL389630_random 60419 88 - 103936 GATCTCAGTTAACTCACTCCCCAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACTCACTCACCAGGAGCCAGGTCCCTCCATAA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869229 88 - 123690457 CATCTCAATTTATTCACTTACCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCACCAGGAGCCAGGCCTCTCCAGAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192440795 87 - 192460366 GATCTCAATTAATTCACTGACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCACTCA-CAGGACCTAGGTCTCTCCATAC i macFas5.chr2 C 0 T 982 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359193 163 + 187378091 T e rheMac3.chr2 192588138 315 + 192599291 I a score=545.000000 s hg38.chr3_KI270937v1_alt 84665 12 + 165607 CGGGTGTCAATT s panTro4.chr3_GL389630_random 60507 12 - 103936 TGGATATCAGTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869317 11 - 123690457 CTGGC-TTAATT i nomLeu3.chr11 C 0 T 174 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359193 163 + 187378091 T e macFas5.chr2 192440882 982 - 192460366 T e rheMac3.chr2 192588138 315 + 192599291 I a score=373.000000 s hg38.chr3_KI270937v1_alt 84677 4 + 165607 AACT s panTro4.chr3_GL389630_random 60519 4 - 103936 AACT i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359193 163 + 187378091 T e macFas5.chr2 192440882 982 - 192460366 T e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869328 174 - 123690457 T a score=300.000000 s hg38.chr3_KI270937v1_alt 84681 1 + 165607 C s panTro4.chr3_GL389630_random 60523 1 - 103936 C i panTro4.chr3_GL389630_random C 0 C 0 s papAnu2.chr2 187359030 1 + 187378091 C i papAnu2.chr2 T 163 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e macFas5.chr2 192440882 982 - 192460366 T e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869328 174 - 123690457 T a score=2679.000000 s hg38.chr3_KI270937v1_alt 84682 6 + 165607 ACTCGC s panTro4.chr3_GL389630_random 60524 6 - 103936 ACTTAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869154 6 - 123690457 ACTCAC i nomLeu3.chr11 T 174 C 0 s papAnu2.chr2 187359031 6 + 187378091 ACTCAC i papAnu2.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e macFas5.chr2 192440882 982 - 192460366 T e rheMac3.chr2 192588138 315 + 192599291 I a score=29318.000000 s hg38.chr3_KI270937v1_alt 84688 38 + 165607 CAGGAGCCAGGTCCCTCCCTAATGGATCTCAATTAACT s panTro4.chr3_GL389630_random 60530 38 - 103936 CAGGAGCCAGGTCCCTCCATACCTGATCTCAATTAACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869160 38 - 123690457 CAGAAGCCAGGTCCCTCCATACCTCATCTCAATTAACT i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439900 38 - 192460366 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATT i macFas5.chr2 T 982 C 0 s papAnu2.chr2 187359037 38 + 187378091 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATT i papAnu2.chr2 C 0 T 45 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=31804.000000 s hg38.chr3_KI270937v1_alt 84726 52 + 165607 CACTCACCAGGAGCCAGGTCCCTCCACACCTCATCTCAATTAACTCAGTCAC s panTro4.chr3_GL389630_random 60568 52 - 103936 CACTCACCAGGATCCAGGTCCCTCCATACCGGATCTCAATTAACTCACTCAC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869198 52 - 123690457 CACTCCCCAGGAGCCAGGTCCCTCCATACCTCATCTCAATTTATTCACTTAC i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439938 46 - 192460366 CACCCA-CAGGACCCACGTCCCTCCCAACCTGATCTCAATTAATTCA----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359030 52 + 187378091 CACTCACCAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCAC i papAnu2.chr2 T 45 T 45 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=28910.000000 s hg38.chr3_KI270937v1_alt 84778 44 + 165607 CAGGAGACAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA s panTro4.chr3_GL389630_random 60620 44 - 103936 CAGGAGACAGGTCCCTCCATAATGGATCTCAATTAACTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869250 44 - 123690457 CAGGAGCCAGGTCCCTCCATACCTCATCTCAATTAACTCACTCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192439984 40 - 192460366 CAGGACCCACGTCCCTCCCTACCTGATCTCAATTAATTCA---- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359037 44 + 187378091 CAGGAGCCACGTCCCTCCCTACCTGATCTCAATTAATTCATTCA i papAnu2.chr2 T 45 I 100 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e rheMac3.chr2 192588138 315 + 192599291 I a score=12964.000000 s hg38.chr3_KI270937v1_alt 84822 35 + 165607 CCAGGAGCCAGTCCTCTCCATACCTGATCTCAGTT s panTro4.chr3_GL389630_random 60664 35 - 103936 CCAGGAGCCAGGCCTCTCCATACCTGATCTCAGTT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869294 34 - 123690457 CCAGGAGCCAGGCCTCTCCAGACCTGG-CTTAATT i nomLeu3.chr11 C 0 T 29 s macFas5.chr2 192440024 34 - 192460366 -CAGGACCCACGTCCCTCCCTACCTGATCTCAATT i macFas5.chr2 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 100 + 187378091 I e rheMac3.chr2 192588138 315 + 192599291 I a score=1725.000000 s hg38.chr3_KI270937v1_alt 84857 10 + 165607 ACCTCACTCA s panTro4.chr3_GL389630_random 60699 10 - 103936 ACCTCACTCA i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr2 192440058 10 - 192460366 AATTCACTGA i macFas5.chr2 C 0 I 814 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 100 + 187378091 I e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869328 29 - 123690457 T a score=482.000000 s hg38.chr3_KI270937v1_alt 84867 5 + 165607 CCAGT s panTro4.chr3_GL389630_random 60709 5 - 103936 CCAGT i panTro4.chr3_GL389630_random C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 100 + 187378091 I e macFas5.chr2 192440068 814 - 192460366 I e rheMac3.chr2 192588138 315 + 192599291 I e nomLeu3.chr11 2869328 29 - 123690457 T a score=1173.000000 s hg38.chr3_KI270937v1_alt 84872 4 + 165607 AGCC s panTro4.chr3_GL389630_random 60714 4 - 103936 AGCC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869299 4 - 123690457 AGCC i nomLeu3.chr11 T 29 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e chlSab2.chr15 91385229 20 + 91754291 I e papAnu2.chr2 187359081 100 + 187378091 I e macFas5.chr2 192440068 814 - 192460366 I e rheMac3.chr2 192588138 315 + 192599291 I a score=3115.000000 s hg38.chr3_KI270937v1_alt 84876 4 + 165607 AGGC s panTro4.chr3_GL389630_random 60718 4 - 103936 AGGC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869303 4 - 123690457 AGGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588453 4 + 192599291 AGGT i rheMac3.chr2 I 315 C 0 s chlSab2.chr15 91385249 4 + 91754291 AGGT i chlSab2.chr15 I 20 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e papAnu2.chr2 187359081 100 + 187378091 I e macFas5.chr2 192440068 814 - 192460366 I a score=12507.000000 s hg38.chr3_KI270937v1_alt 84880 10 + 165607 CTCTccagac s panTro4.chr3_GL389630_random 60722 10 - 103936 CTCTccagac i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869307 10 - 123690457 CTCTCCAGAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588457 10 + 192599291 CTCTCCATAC i rheMac3.chr2 C 0 C 0 s papAnu2.chr2 187359181 10 + 187378091 CTCTCCATAC i papAnu2.chr2 I 100 C 0 s chlSab2.chr15 91385253 10 + 91754291 CTCTCCATAC i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I e macFas5.chr2 192440068 814 - 192460366 I a score=20991.000000 s hg38.chr3_KI270937v1_alt 84890 11 + 165607 ctggcttaatt s panTro4.chr3_GL389630_random 60732 11 - 103936 ctggcttaatt i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869317 11 - 123690457 CTGGCTTAATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588467 11 + 192599291 CTGGCTTAATT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440882 11 - 192460366 CTGGCTTAATT i macFas5.chr2 I 814 C 0 s papAnu2.chr2 187359191 11 + 187378091 CTGGCTTAATT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385263 11 + 91754291 TTGGCTTAATT i chlSab2.chr15 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e calJac3.chr17 73870378 0 + 74750902 C e canFam3.chr33 2339164 32 - 31377067 I a score=54809.000000 s hg38.chr3_KI270937v1_alt 84901 28 + 165607 ctcactatactt-aattcaattaattctc s panTro4.chr3_GL389630_random 60743 28 - 103936 ctcactatactt-aattcaactaattctc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2869328 28 - 123690457 CTCACTATACtt-aattcaattaattctc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588478 28 + 192599291 CTCACTATACtt-aattcaattaagtctc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440893 28 - 192460366 CTCACTATACtt-aattcaattaagtctc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359202 27 + 187378091 CTTACTATACTT--ACTCAATTAATTCTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385274 28 + 91754291 CTCACTATACtt-aattcaattaagtctc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73870378 29 + 74750902 ctctctatgcctgagctcaatcaatcctc i calJac3.chr17 C 0 C 0 e ponAbe2.chr3 2408378 40 - 202140232 I e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I a score=12389.000000 s hg38.chr3_KI270937v1_alt 84929 5 + 165607 actat s panTro4.chr3_GL389630_random 60771 5 - 103936 actac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408418 5 - 202140232 actat i ponAbe2.chr3 I 40 C 0 s nomLeu3.chr11 2869356 5 - 123690457 actat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588506 5 + 192599291 actgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440921 5 - 192460366 actgt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359229 5 + 187378091 ACTAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385302 5 + 91754291 actat i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73870407 5 + 74750902 cctat i calJac3.chr17 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339164 32 - 31377067 I a score=811570.000000 s hg38.chr3_KI270937v1_alt 84934 253 + 165607 agccctatcagacaaactctaggatacacatgaggatacagagtctcagaaaggctgagaaagtgg--cttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcaag----tctgactctcaagtccacgctctttccattgcactat-ctgcttttctTTCTCCCCAAAG-CCACAATATGCCACGATGCGGCCCAAGGCCTCTCCTCCAGTACCGTGCTGAGGGCTCTGAACAGATCAGGGCTGAAGCC s panTro4.chr3_GL389630_random 60776 253 - 103936 agccctatcagagaaactctaggatacacatgaggaaacagagtctcagaaaggctgagaaagtgg--cttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcatg----tatgactctcaagtgcacgctctttccattgcagtat-ctgcttttctTTCTCCCCAAAG-CCACAATATGCCACGATGTGGCCCAAGGCCTCTCCTCCAGCACCGTGCTGAGGGCTCTGAACAGATCAGGGCTGAAGCC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408423 253 - 202140232 agccctatcagacaaactctaggatacgcatgaggaaacagagtctgagaaaggctgagaaagtgg--cttgaggtcacctaggtggtgagtggtagagctaggagttgaagtcaag----tctgactctcaagtccacgctctttccattgcactat-ctgcttttctTTCTCCCCAAAG-CCACAATATGCCATGATGCAGCCCAAGGACTCTCCTCCAGTACTGTGCTGAGGGCTCTGAAGAGATCAGGGCTGAAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869361 253 - 123690457 agccctatcagacaaactctaggatacatatgaggaaacagaggctcagaaaggctgagaaagtgg--cttgaggtcacctaggtggtaagtggtagagctaggagttgaagtcaag----tctgactctgaagcccacgctcttttcattgcactat-ctgcttttctTTCTCCCCAAAG-CCACAATATGCCACAATGCAGCCCAAGGCCTCTCCTCCAGTACTGTGCTGAGGGCTCGGAACAGATCAGGGCTGAAGCC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588511 252 + 192599291 agccctatcagacaagctctaggacacacatgaggaaatggaggctcagaaagactgagaaagtgg--cttgaggtcacctaggtggtaagtggtggagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ccgcttttctTTCTGCCCAAAG-CCACAATATGCCATGATGTGGCTCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTAAAGCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192440926 252 - 192460366 agccctatcagacaagctctaggacacacatgaggaaatggaggctcagaaagactgagaaagtgg--cttgaggtcacctaggtggtaagtggtggagctaggagttgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ccgcttttctTTCTGCCCAAAG-CCACAATATGCCATGATGTGGCTCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTAAAGCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359234 252 + 187378091 AGCCCTATCAGACAAGCTCTAGGATAcacatgaggaaatggaggctcagaaagACTGAGAAAGTGG--CTTGAGGTCACCTAGGTGGTAAGTGGTAGAGCTAGGAGTTGAAGTCAAG----TCTGACTCTCAAGCCCATGCTCTTTCCATCGCActat-ctgcttttctttctgccCAAAG-CCACAGTATGCCATGATGCAGCCCAGGG-CTCTCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGGCTGAAGCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385307 252 + 91754291 agccctatcagacaagctctaggatacacatgaggaaatggaggctcagaaagactgagaaagtgg--cttgaggtcacctaggtggtaagtggtagagctaggaattgaagtcaag----tctgactctcaagcccatgctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-CCACAATATGCCACGATGCAGCCCAGGG-CTCCCCTCCAGTACTGGGTTGAGGGCACTGGACAGATCAGGACTGAAGCC i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73870412 253 + 74750902 gcccctatcaggcaagctctaggagacacatgaggaaactgaggctcagaaaggctgagaaagtgg--cttgaggtcacccaggcagtaagcggtagagctaggagttgaactcaagtccatctgactatcaagcccaccctctttccattgcactat-ctgcttttctTTCTGCCCAAAG-TCATAATATGCCAGGATGTGGGCCAAGGCCTCTCCTCCAGTGCTGGGCAGAGGGCTCTGGACAGATC----TTGAGGCC i calJac3.chr17 C 0 C 0 s canFam3.chr33 2339196 244 - 31377067 agctctgcaaggcaagctctaggacacagatggggaaagggaagc-----------gagaaggaggtacgtcagttcctccaggtaacacgtggtagaggtgggatctggacccagaact-ttcggctcccaagtccatgctccttccattgtcccacgttgcctttctTTCTGCCCCATGTTCACAAT-----AAAGTGGAGGCTGAGGCCTCCGTTCCAGTGCCGGGCAGAGAGCTCTGGACAAGCCAGGGCTGAAGCC i canFam3.chr33 I 32 I 1 e mm10.chr16 32805152 1020 + 98207768 I a score=1214941.000000 s hg38.chr3_KI270937v1_alt 85187 432 + 165607 AAGAtgtcatcc-----agtgcaatacccacatgacctccgtgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcatttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactaacaccgtaacagtcaacaaccaacatgacaatgat-gggaaaaaataacataaaaaaacaaataggaaggtggcactctggttttgaaaatttctccacccagacccagaaaacacatgattcctccccttgcttttttcatttttatttttgtagagatgggggtgtatcactatgttgaccaggatggtctcgaactcctggtctc-agcaatcctctcattttg s panTro4.chr3_GL389630_random 61029 432 - 103936 AAGAtgtcatcc-----agtgcaatacccacatgacctccatgcatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagagtgatggaatccaagatggcagctcacttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactagcaccttaacagtcaacaaccaacatgacaatgat-ggggaaaaaaaacataaaaaaacaaataggaaggtggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctctccttgcttttttcatttttatttttgtagagatgggggtgtatcactatgttgaccaggatggtctcaaactcctggtctc-agcaatcctctcattttg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2408676 431 - 202140232 AAGAtgtcatcc-----agtgtaatacccacatgacctccgtgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaagtccaaacttctcc----ctggtgatcaaaccagctaagactgatcgaatccaagatggcagctcacttgacctctaacttcattataatctaatttccatgttaaatgacagtcccactagcactgtaacagtcaacaaccaacatgacaatgat-gggaaaaaa-aacataaaaaaacaaataggaaggtggcactctggttttgaaaagttctccacccagacccagaaaacacacgattcctccccttgctcttTTCatttttatttttgtagagataggggggtatcactacattgaccaggatggtctcaaactcctggtctc-agcaatcctctcattttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2869614 430 - 123690457 AAGAtgtcatcc-----agtgtaatacccacatgacctccgtgaatatctaccctgccttaacactgtttatctttaggaagcaggatgcctgaggtccaaacttctcc----ctggtgatcaaaccagctaagacggatggaatccaagatggcacctcacttgacctctaacttcattatgatctaatttccatgctaaatgacagtcccactagcaccgtaacagtcaacaaccaacatgacaatgat-gagaaaaa--accataaaaaaacaaatagcaaggtggcactgtggttttgaaaagttctccacacagacccggaaaacacaggattcctccccttgcttttttcatttttatttttgtagagatgggggggtatcactatgttgacgacgatggtctcgaactcctggtctt-agcaatcctctcattttg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192588763 427 + 192599291 AAGGtgtcgtcc-----agtgtaatgcccacatgacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctaacttcgttataatctaatttccatgctaaatggtagtcccgctagcaccataacagtcaacaaccaccatgacaatgat-ggaaaaaaaca----taaaaaacaaatagaaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttacTTTTTTCatttttagttttgtagagatgggga-gtatcactatgttaaccaggatggtctcgaactcctggtctc-ggcaatcctctcatcttg i rheMac3.chr2 C 0 I 11 s macFas5.chr2 192441178 426 - 192460366 AAGAtgtcgtcc-----agtgtaatgcccacatgacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctaacttcgttataatctaatttccatgctaaatggtagtcccgctagcaccataacagtcaacaaccaccatgacaatgat-ggaaaaaaaca----taaaaaacaaatagaaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttacttttttcatttttagttttgtagagatgggga-gtatcactatgttaaccaggatggtctcgaactcctggtctc-ggcaatcctctcatctt- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359486 429 + 187378091 AAGATGTCATCC-----AGTGTAATGCCCACATGACCTCCGTGAATACCTACCCTGCCTTAACTCTGTTTATCTTTAGGAAACAGGATACCTGAGGTCCGAACTTCTCC----CTGGTGATCAAACCAGCTAAGACTGATGGAATCCAAGATGGCAGCTCACTTGACCTTTAACTTCATTATAATCTAATTTCCATGCTAAATGACAGTCCCGCTAGCATTGTAACAGTCAACAACCACCATgacaatgat-taaaaaaaaaaac--taaaaaacaaataggAAGTTGGCACTCTGGTTTTGAAAAGTTCTCCACCCAGACCCAGAAAACACATGATTCCTCcccttgcttttttcatttttgtttttgtagagacgggga-gtatcactatgttaaccaggatggtctcgaacttctggtctC-GGCAATCCTCTCATCTTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385559 429 + 91754291 AAGAtgtcatcc-----agtgtaatgcccacataacctccgtgaatacctaccctgccttaactctgtttatctttaggaaacaggatgcctgaggtccgaacttctcc----ctggtgatcaaaccagctaagactgatggaatccaagatggcagctcacttgacctctagcttccttataatctaatttccatgctaaatagcagtcccgctagcaccataacagtcaacaactaccatgacaatgat-gggaaaaaaaaca--taaaaaacaaataggaagttggcactctggttttgaaaagttctccacccagacccagaaaacacatgattcctccccttgctcttTTCATTTTTAGttttgtagagatgggga-gtatcaccatgttaaccaggacggtctcgaactcctggtctc-ggcaatcctctcatcttg i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73870665 419 + 74750902 AAGAtgttatcccgtgtaatgtaatgcctacatgaccttggtgaatatctacc-------------------ctttaggaaacaggatgcctgaggtcagaacctctccttagctggtgatcaaaccagctaagactggtggaatccaagatggcagctcacctgacctctaacttcattataatctaatttccatgctaaatcacacttccactggcaccataacagtaatcaagcaccgtgacaatgctggggggaaaaaaacataaaaaaacagataggaaagtggcactc-ggtttggaaaacttctccacccagacccagaaaacaca--attcctccctttgctttttTTatttttatttttgtagagatgagg--gtctcattacgttgaccaggctggtctcgaactcctggtctcaagcaatcctctcatcttg i calJac3.chr17 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339440 1 - 31377067 I a score=27213.000000 s hg38.chr3_KI270937v1_alt 85619 22 + 165607 gcctcccaaagttctgggttta s panTro4.chr3_GL389630_random 61461 22 - 103936 gcctcccaaagttctgggttta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2409107 22 - 202140232 gcctcccgaagttctgggttta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2870044 22 - 123690457 gcctcccgaagttctgggttta i nomLeu3.chr11 C 0 C 0 s macFas5.chr2 192441604 12 - 192460366 ----------gTTCTGGGTTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187359915 10 + 187378091 -----------TTCTGGGTTA- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385988 11 + 91754291 -----------ttctgggttta i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73871084 22 + 74750902 gcctcccaaagtgctgggttta i calJac3.chr17 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339440 1 - 31377067 I e rheMac3.chr2 192589190 11 + 192599291 I a score=448359.000000 s hg38.chr3_KI270937v1_alt 85641 261 + 165607 tgggagtgagccatt-gcacctggccactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgacttcct-gggtctcacgagcagaaaagttgatttgtgagccaagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgaggctcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccattttagggaaagtggctttgtcagtaacaA s panTro4.chr3_GL389630_random 61483 261 - 103936 tgggagtgagccatt-gcacctggccactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgacttcct-gggtctcacgagcagaaaagttgatttgtgagccaagctctcacttctcaattccatggccaccaaataaagcctgtactgcttgaggctcactttcggttttgcatattggcttcatggcaccaaacagggaaagaccccattttagggaaagtggctttgtcagtaacaA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2409129 261 - 202140232 tgagagtgagctatt-gcacctggcCactcctccccttgcttttaatgctcagccccttcactaaagatgccctgtatctgtgacttcct-gggtctcatgagcagaaaagttgatttgtgagccaagctctcacttctcaattccgtggccaacaaataaagcctgcactgcttgaggctcacttttggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagtaacaA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2870066 261 - 123690457 tgggagtgagccatt-gcacctggccactcctccctttgcttttaatgctcagccccttcactaaagatgccctatatctgtgacttcct-gggtctcatgagcagaaaagttgatttgtgagccaagctctcacttctcaattccatggccaccaaataaagcctgcactgcttgaggctcacttttggttttgcatattggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagtaacaA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187359925 260 + 187378091 TGGGAgtgagccatt-gctcctggccACTCCTCCCCTTGCTTTTCATGCTCAGCCCCTTCACTAAAGGTGCCCTATATCTGTGACTTCCT-GGGTCTCACGAGCAGAAAAGTTGATTTGTGAGCCAAGCTCTCACTTCTCAATTCCATGG-CACCAAATAAAGCCTGCACTGCTTGAGGCTCAGTTTGGGTTTTGCATATTGGCTTCATGGCACCAAACAGGGAAAGACCTCATTTTAGGGAAAGTGGCTTTGTCAGTAACAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91385999 253 + 91754291 tgggagtgagccttt-gctcctggccactcctccccttgcttttcatgctcagccccttcactaaaggtggcctatatctgtgacttcct-gggcctcacgagcagaaaagttgatttgtgagccaagctctcacttctcaattccatgg-caccaaataaagcctgcactgcttgaggctcagttttggtt-------ttggcttcatggcaccaaacagggaaagaccccattttaggggaagtggctttgtcagtaacaA i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73871106 252 + 74750902 taggagtaagccattggcacgtggccactcctcctcttgcttttaatgctcagccccctt-----------tctatatctgcgacttcccagagtctcacaagcagaaatggtgatttgcgagccaagcgctcacttctcagttccacggccaccaaataaagcctgtactgcttgaccctcactttccgtttcacatattggcttcatggcaccaaacagggaaagaccccatttcagggggagtggctttgtcagtaacaA i calJac3.chr17 C 0 C 0 e mm10.chr16 32805152 1020 + 98207768 I e canFam3.chr33 2339440 1 - 31377067 I e macFas5.chr2 192441616 0 - 192460366 C e rheMac3.chr2 192589190 11 + 192599291 I a score=652267.000000 s hg38.chr3_KI270937v1_alt 85902 329 + 165607 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gcagaagtcagcaaactatggtctatgggccaaatctggc-cactgcctgt--ttttgtgcaactcataggctaagaatgttttctaca-----------------------------------tttttagatggtaggagaagaacaaaagagg-aagaatgttttgtcaca-----aaagtatatgagattcaaatttcagtgtccacagaCGGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGGAGCTCTGCCCTAGCTACGGCCCCTTTCTTCTTTTGG------TTCCCTGACTTTGGGGCCTGGAGGGCACAAAGGCAAGGAGCAGGCTG s panTro4.chr3_GL389630_random 61744 334 - 103936 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gcagaagtcagcaaactatggtctatgggccaaatctggc-cactgcctgt--ttttgtgcaactcataggttaagaatgttttctaca-----------------------------------tttttagatggtaggagaagaacaaaagaag-aataatgttttgtcacacatgaaaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGGAGCTCTGCCCTAGCTATGGCCCCTTTCTTCTTTTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2409390 333 - 202140232 GGGCACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gcagaagtcagcaaactatggtctatggaccaaatctggc-cactgcctgt--ttttgtgcaactcata-gctaagaatgttttctaca-----------------------------------tttttagatggtaggagaagaacaaaagaag-aataaagttttgtgacacatgaaaactatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTGAAACAATCATTGCAGTGGAGCTCTGCCCTAGCTACGGCCCCTTTCTCCCTTTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2870327 334 - 123690457 GGACACAGAAGGAAAGA----AATGGAGGATGATTTAGG------Gcaaaagtcagcaaactatggtctatggaccaaatctggc-cactgcctgt--ttttgtgcaactcataggctaagaatgttttctaca-----------------------------------tttttagatggtaggagaagaacaaaagaag-aataatgttttgtgacacatgaaaagtatatgagattcaaatttcagtgtccacagacaGCAATCCTGGCTCCTACCCCTAAAACAATCATTGCAGTGGAGCTCGGCCCTAGCTACGGCCCCTTTCTCCCTTTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187360185 337 + 187378091 GGACacggaaggaaagaagagaatggaGGATGACTTAgg------gcagaggtcagcaaactacggtctatgggccaaatctggc-cactgcctgt--ttttgtgcaACTCATAGGCTAAgaatgttttctaca-----------------------------------tttttagatggtaggaaaagaacaaaagaaggaataatgttttgtgacacatgaaaaGTATATGagattcaaatttcagtgtccacagAC--CAATCCTGGCTCCTACCCCTACAACAATCATTGCAGTGGAGCTCTGCCCTAGATACAGCCCCTTTCTCCCTTTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91386252 339 + 91754291 GGACACAGAAGGAAAGAAGAGAATGGAGGATGACTTAGG------Gcagaggtcagcaaactacggtctatgggccaaatctggc-cactgcctgt--ttttgtgcaactcataggctaagaatgttttctaca-----------------------------------tttttagatggtaggaaaagaacaaaagaagaaataatgttttgtgacacatgaaaagtatatgcgattcaaatttcagtgtccaCGGACAGCAATCCTGGTTCCTACCCCTAAAACAATCATTGCAGTGGAGCTCTGCCCTAGCTACAGCCCCTTTCTCCCTTTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGCAGGCTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73871358 337 + 74750902 GGACACAGAAGGAAAGAAGAGGATGGAGGATGACCTATG------Gcagaggtcagcaaactacagtctatggggcaaatctggc-cactgcctgt--gtctgtacgactcataggctaagaatgttttctgtg-----------------------------------ttgttagatggcaggagaaaaacaaaa-aag-aataatgttttgtgacacatgaaaagtagatgaggttcaaatttcagtgtccacagacaGCAATCCTGGCTCCTATCCCTAAAACCATCATTGCAGTGGAGCTCTGCCATAGCGAAGGCCCCTTTCTCCCTCTGG------TTCCCTGACTTTGGGGTCTGGAGGCCACAAAGGCAAGGAGTAGGCTG i calJac3.chr17 C 0 C 0 s canFam3.chr33 2339441 374 - 31377067 GGGCACAGAAGAGAAA-----TACGAAGGACGATTTAGAGGTGACGcagagggcagcaaaccacaatccgcgg-ctgcattgggcttgctgcaggttgtttggtccagatcacaagttaagaatgcttttcacaaaaaaaaaaaaaaaaaaaaaagaatgcttttcacgcttttaagtggttgaaaaaaagtcaa------aagaatatttcatgacacatgaaaattatataaaatgtcagtgtcagtgtccaCGGCCCGGAACCACGGCTCCGGGCCCTAAAACCATGGTTGCTGCAGGGCTCTGCCCCA-CTCGGGTCTCTTTTCCTGACTGGTAGTTATTCCCTGACTTTGGGGGCTGGAGGC--CAGGGGGTAGGGGCAGCTTG i canFam3.chr33 I 1 C 0 e mm10.chr16 32805152 1020 + 98207768 I e macFas5.chr2 192441616 0 - 192460366 C e rheMac3.chr2 192589190 11 + 192599291 I a score=171413.000000 s hg38.chr3_KI270937v1_alt 86231 80 + 165607 CCATCCACCCCTTCTCAGAGAACCTGCAGGGAGCTCACCATGCTCTGCATCCAGTCTAGGTGGCTCCTAGCGGGGCTTGG s panTro4.chr3_GL389630_random 62078 80 - 103936 CCATCCACCCCTTCTCAGAGAACCTGCAGGGAGCTCACCATGCTCTACATCCAGTCTAGGTGGCTCCTAGCGGGGCTTGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2409723 80 - 202140232 CCATCCACCCCTTCTCAGAGAACCTGCAGGGAGCTCACTGTGCTCTGCATCCAGTCTAGGTGGCTCCTAACGGGGCTTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2870661 80 - 123690457 CCATCCACCCCTTCTTGGAGAAACTGCCGGGAGCTTACCGTGCTCTGCATCCAGTCTAGGTGGTTCCTAGCGGGGCTTAG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr2 187360522 80 + 187378091 CCATCCACCCCTTCTCAGAGAACCTACAGGGAGCTCACCATGCTCTGCATCCGGTCTAGGTGGCTCCTAGCGGGGCTTGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91386591 80 + 91754291 CCATCCACCCCTTCTCGGGGAACCTACAGGGAGCTCACCATGCTCTGCATCCGGTCTAGGTGGCTCCTAGCGGGGCTTGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73871695 80 + 74750902 CCATCCACCCCTTCTTGGAGAGCTTCCAGGGAGCTTACCATGCTCTGCACCCAGTCTAGACGGCTCCTAGCAGGGCTGGG i calJac3.chr17 C 0 C 0 s mm10.chr16 32806172 69 + 98207768 CCCCCCACCCCCGCT-----------CAGGGCACTCACCATGTTTTGTACCAAATCTTGATTGTTCCTGGCTGAGTCGAG i mm10.chr16 I 1020 C 0 s canFam3.chr33 2339815 78 - 31377067 -TCGCCGCCCCGTCTGGGAGACCGTCTAGGGCCCTCCCCGCGCTCTGCGTC-GGCCCAGACGGCGTCTCCCAGGGCGCGG i canFam3.chr33 C 0 C 0 e macFas5.chr2 192441616 0 - 192460366 C e rheMac3.chr2 192589190 11 + 192599291 I a score=1328670.000000 s hg38.chr3_KI270937v1_alt 86311 385 + 165607 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGTAAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CTGCTGCTGCTCAATGTCCCCAGTATCT-CTCTGCAGACTCCTGTGTGCCCTCAAAAGTCTACACGGTACCAGTCAAGAGACATCCATACTGCAAGATGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTACCCTCATGTCTACCACGGACAGCTGAACCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAGCATGTAGGCACCTTTGACCTG-----AAATAGACAAG s panTro4.chr3_GL389630_random 62158 385 - 103936 TGGGTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGTAAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CCGCTGCTACTCAATGTCCCCAGTATCT-CTCTGCAGACTCCTGTGTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACATCCATACTGCAAGATGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTACCCTCATGTCTACCACGGACAGCTGAACCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTAGGCACCTTTGACCTG-----AAATAGACAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2409803 385 - 202140232 TGGGTTCTCCGTCCTCAACACCATCGGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGTAAATGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--TTGCTGCTGCTCAATATCCCCAGTATCT-CTCTGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACATCCATACTGCAAGATGATAGAAAGG----TAAGTGGAACCCAACCATCTCATTCTCTACCCTCATGTCTACCATGGACAGCTGAACCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GAAACAAAGCTAGAAGGAACATGTAGGCACCTTTGACCTG-----AAATAGACAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2870741 383 - 123690457 TGGCTTCTCCATCCTCAGCACCATCTGCAGCACCATCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGTAAACGTTCCTGTCCTCATTTCTGCCTCCCAACCCCA--CTGCTGCTGCTCAGCATCCCCAGTATCT-CTCTGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACATCCATACTG-AAGACGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTACCCTCATGTCTACCACGGACAGCTGAACCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAAGAACATCAGG-GAAA-AAAGCTAGAAGGAATATGTAGGCACCTTTGACCTG-----AAATAGAGAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192589201 380 + 192599291 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAATACAAGGTGAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CTGCTGTTGCTCAACGTCCCCAGCATCT-CTCCACAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTGCCAGTCAAGAGACAGCCATACTGCAAGAAGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTGCCCTCATGTCTACCACGGACAGCTGAA-----CCCTGTGGA-ACCTGGAAAAGCAGCTCAGAGAGGAGTAGCA--GGTGGCAAGAAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGGCACCTTTGACCTG-----AAATAgacagg i rheMac3.chr2 I 11 C 0 s macFas5.chr2 192441616 380 - 192460366 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAATACAAGGTGAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CTGCTGTTGCTCAACGTCCCCAGCATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTGCCAGTCAAGAGACAGCCATACTGCAAGAAGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTGCCCTCATGTCTACCACGGACAGCTGAA-----CCCTGTGGA-ACCTGGAAAAGCAGCTCAGAGAGGAGTAGCA--GGTGGCAAGAAACATCAGG-GGAACAAAGCTAGAAGGAATATGTAGGCACCTTTGACCTG-----AAATAgacagg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187360602 385 + 187378091 TGGGTTCTCCTTCCTCTGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGGGAAACACAAGGTGAATGTTCTTGTCCTCATTTCTGCCTCCCACACCCA--CTGCTGTTGCTCAATGTCCCCAGTATCT-CTCCGCAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGACAGTCATACTGCAAGAAGATAGAAAGG----TAAGTGGAAACCAACCACCTCATTCTCTGCCCTCATGTCTACCACGGAAGGCTGAACCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGGCACCTTTGACCTG-----AAAGAGACAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91386671 385 + 91754291 TGGGTTCTCCTTCCTCAGCACCATCTGCAGCACCACCTTGGTCATCTGAGAAGCTGAGAGAAACACAAGGTGAACGTTCTTGTCCTCATTTCTGCCTCCCACCCCCA--CTGCTGTTGCTCAGCGTCCCCAGTATCT-CTCCGAAGACTCCTGTCTGCCCTCAAAAGTCTACATGGTACCAGTCAAGAGATGGCCATACTGCAAGAAGATAGAAAGG----TAAGTGGAACCCAACCACCTCATTCTCTGCCCTCATGTCTACCACGGACAGCTGACCCTCTCCCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA--GGTGGCAAGGAACATCAGG-GGAACAAAGCTAGAAGGAACATGTAGGTACCTTTGACCTG-----AAATAGACCGG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73871775 380 + 74750902 TGGGTTCTCCATCCTCAGCACCATCTGCAGCCCCATCTTGGTCATCTGAGAAGCTGAAAGAAACACAAGGTGAAGGCTCCTGTCATCATTTCTGCCTCCCACACCCA--CTGCTGCTGCCCAGCATCCCCGGCATCT-CTCTGCAGACTCCTGTCTCCCCTCAAAAGTCTACCTGCTGCCAGTCAAGAGGCATCCATACTGCAAGAAGAGAGAACGT----TAAGTGGACCCCAGCCACCTCTTTCT----CCTCTTCTCTACCACAGACAGCTTAACCTCTCTCTGTGGA-ACCTGGAAAAGTAGCTCAGAGAGGAGTAGCA---GTGGCAAGG-ACATCA-T-GAAACAAAGCTAGAAG--ACGCGTA-GCACCTTTGACCTGATCTCAGATTGTCAAG i calJac3.chr17 C 0 I 68 s mm10.chr16 32806241 344 + 98207768 TGGCCTCTCGGTCCTCAGCACCATCTGTAGCACCATCTTGGGAGTGTGAAAGGCT----GGAACACAGGGTGAAGGC-CTTGTCTTCATCCGTGCTCCTCTCCCCCAGCCCACTTCTGGTCAACATCCCCAACACCT-CTCTGAGGACTCT--TCTGCTCTGACATCTCCAAGCAA----GGCCAAGCGGCATACATAGAGCAAGA------AAAGG----TTGG--------GCCCACCACCTTTCCTAGCCTGGTTTTCACCACTGATAGCTCAGCCTCTCCCTGTGGG-ACCT-AAAGAGAGGCTTGGGGGAGAGCAGCA--GGTG------------------AAGGGAGTCGAGAGGAACGTGAAGAAGTTTTGAGCGTG-----AAATGCATAGA i mm10.chr16 C 0 C 0 s canFam3.chr33 2339893 374 - 31377067 --GCTTCTGCGGCCTCAGCACCACCCGCGGCACCACCCGGGGT-TCTGAGAAGCTGA--GAAACTCCAGGCGGCAGCTCCTGTCCCCACCCGGGGCTCCCACGCCCC--CTCCGGCTGCCTAACCTCCTCAGCTCCCACTCTGCAAAC---------CCCTCGAAAGTCTACATGG-GCAGGTCAAGAGGCATCTGTATTTCAAGA-GATGGAAGGGCCGTTGGGGGGAACCCCATCGCCCCACTCCCCACCCTGATCCCCA--ACCACCAGATTAAGCTCTCCCTGTGGGCATCTGGGAAAGTAGCTCAGAGGGGAGCAGCAGGGGTGGGGTGGGGTGGGGGGTGAGACAAAGCTGGGAGGAACGTG--GGCACTTTTGACATG-----AAATGgacaaa i canFam3.chr33 C 0 C 0 a score=74967.000000 s hg38.chr3_KI270937v1_alt 86696 23 + 165607 ATG-caagatct-caggattgtcag s panTro4.chr3_GL389630_random 62543 23 - 103936 ATG-caagatct-caggattgtcag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410188 23 - 202140232 ATG-Aaagatct-caggactgtcag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871124 23 - 123690457 ATG-caagatct-caggattgtcag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192589581 23 + 192599291 atg-caagatct-caggattgtcag i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192441996 23 - 192460366 atg-caagatct-caggattgtcag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187360987 23 + 187378091 ATG-CAAGATCT-CAGGATTGTCAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91387056 23 + 91754291 ATG-caagatct-caggattgtcag i chlSab2.chr15 C 0 C 0 s mm10.chr16 32806585 24 + 98207768 CTA-TAAGAACTGCAGGACCATCAG i mm10.chr16 C 0 C 0 s canFam3.chr33 2340267 24 - 31377067 atgtcaggatcc-cagaattgtcag i canFam3.chr33 C 0 C 0 e calJac3.chr17 73872155 68 + 74750902 I a score=459784.000000 s hg38.chr3_KI270937v1_alt 86719 130 + 165607 ggaccttaggaaccatctaggccacatcccggctttggcctgaagtgcaggcaaagggtttgcctctgccagccatcgcatccagCTTTGCTGTAGGTGGAATCGGGCCTGTATGTGAGTTACCAGGGTT s panTro4.chr3_GL389630_random 62566 130 - 103936 ggaccttaggaaccatctaggccacatcccggctttggcctgaagtgcaggcaaagggtttgcctctGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACGAGGGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410211 130 - 202140232 ggaccttaggaaccatctaggccacatcccGGCTTTGGCCTGAAGTGCAGGCAAGGGGCTTGCCTCTGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACCAGGGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871147 130 - 123690457 ggaccttaggaaccatctaggccacatcctggctttggcCTGAAGTGCAGGCAAAGGGCTTGCCTCTGCCAACCATAGCATCCAGCTTTGCTGTAGGTGGAATCAGGCCTGTATGTGAGTTACCAGGGTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192589604 130 + 192599291 ggaccttaggaaccatctaggtcgcatcccGGCTTTGGCCTGAGGTGCAGGCAAACGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGGACCGGACCTGTGTGTGAGTTACCAGGGTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192442019 130 - 192460366 ggaccttaggaaccatctaggtcgcatcccGGCTTTGGCCTGAAGTGCAGGCAAACGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGGACCGGACCTGTGTGTGAGTTACCAGGGTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187361010 130 + 187378091 GGACCTTAGGAACCATCTAGGTCACATCCCGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGGCTCTGCCAACCACAGCATCCAGCTTTGCTGTGGGTGGAACCGGACCTGTGTGTGAGTTACCAGGgtt i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91387079 130 + 91754291 ggaccttaggaaccatctaggtcacatcccGGCTTTGGCCTGAAGTGCAGGCAAAGGGCTTGCCTCTGCCAACCACAGCATCCAGCTTTGCCGTGGGTGGAAACAGACCTGTGTGTGAGTTACCAGGGTT i chlSab2.chr15 C 0 I 2237 s calJac3.chr17 73872223 130 + 74750902 GGGCCTTTGGAACCATCCAGGGCACGTCCCAGCTTTGGCCTGACATGCAGGCAAAGGGCTCGCCTCTGCCAACCACAGCATGCAGCTTTGCTGTAGGTGGAAACAAGCCTACATGTGAGTTACCAGGGTT i calJac3.chr17 I 68 C 0 s mm10.chr16 32806609 118 + 98207768 -GATGT--GGTGCCACCCA--CTCCATAGCGGCCACCATCTAAAGTCCAGGC-------TTGCCTCTGTGGGTTACAGCATCCAGCTGAGCCACGGGTGGAAGAGAGCCTGCATGCAGGTCACTGGAGTT i mm10.chr16 C 0 C 0 s canFam3.chr33 2340291 125 - 31377067 gcacctccggggccttccagtccacacctgggccttggcctgaggcGC--GTGGACGGGCCGCCTCTGTCCATCACAGCACCCAGCCCCGCCG--GGTGGGAAGGAGCTGGCGTGTGA-TTACCTGGGTG i canFam3.chr33 C 0 C 0 a score=11997.000000 s hg38.chr3_KI270937v1_alt 86849 3 + 165607 GCA s panTro4.chr3_GL389630_random 62696 3 - 103936 GCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410341 3 - 202140232 GCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871277 3 - 123690457 GCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr2 192589734 3 + 192599291 Gca i rheMac3.chr2 C 0 I 2564 s macFas5.chr2 192442149 3 - 192460366 Gca i macFas5.chr2 C 0 I 2558 s papAnu2.chr2 187361140 3 + 187378091 gca i papAnu2.chr2 C 0 I 2538 s calJac3.chr17 73872353 3 + 74750902 GCA i calJac3.chr17 C 0 C 0 s mm10.chr16 32806727 3 + 98207768 GCA i mm10.chr16 C 0 C 0 s canFam3.chr33 2340416 3 - 31377067 GCG i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I a score=203917.000000 s hg38.chr3_KI270937v1_alt 86852 156 + 165607 GAGGACACTGTGGTCTGGGTGGCAGTCTGGTGCCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTGCAGCGGTGATCCGTCCCAAGACAGCAAAGGTTCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAACATTAAAAAAAAAaa-----------a s panTro4.chr3_GL389630_random 62699 167 - 103936 GAGGACACTGTGGTCTGGGTAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGTTCTGGGGTTGGGAACAGCTGCCTGGAGAAAAAGGAACGTTAAAAAAAGAAAGAAAGAAAGaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410344 154 - 202140232 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACTTCCCCTCTTTCACTGGTGATCCGTTCTAAGATAGCAAAGTTGCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAACATTAAAAAAAaa-------------a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871280 165 - 123690457 GAGGACACTGTGGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCACCACAGTAGCAACTTCCCCTCTTGCAGTGGTGATCCGTTCCAAGACGGCAAAGGTGCTGGGGTTGGGAGCAGCTGCCTGGAGAAAAAGGAACGTTaaaaaaaaaaaaaaaaaaaa--a i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872356 152 + 74750902 GAGGAGACTGTAGTCTGGGCAGCAGTCTGGTACCACATGGCAGAATTCATCACAGTAGCAACCTCCCCTCTTGCAGTGGTGATCTGTTCCAAGACAGCAAAGGCGCTGGGGTTGGGAGCAGCTGCCTGGAGAACAAGGAACATTTTTTaaa---------------a i calJac3.chr17 C 0 C 0 s mm10.chr16 32806730 156 + 98207768 GAGGGTCTCGTGGTCTGGGCAGCAGTCTGATAGCACACGGCAGAATTTATCACAATAGCAGTTTCCTCTCTTGCAGCCATAATCCTCTCCGGGGCAGCAGAGAGGCTGGGGCTGGGAACAACTGCCTGGAGGAGAGGAGACATTTAAAAAGACAG-----------A i mm10.chr16 C 0 I 716 s canFam3.chr33 2340419 152 - 31377067 GAGGGCACGGTGGCCTGGGCAGCAGTGTGATGCCACGTGGCAGGATTCGTCACA-CAGCAGCTTCCTCTCCTGCGATGGTG-TCTGATCCGGGGCAGCAGACGGGC-GGGGTTGGGAGCAGCTGCCTGCAG-AGAAGGGACATGAGAAAGAGACAG----------- i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=1365.000000 s hg38.chr3_KI270937v1_alt 87008 1 + 165607 a s panTro4.chr3_GL389630_random 62866 1 - 103936 a i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410498 1 - 202140232 a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871445 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872508 1 + 74750902 a i calJac3.chr17 C 0 C 0 s canFam3.chr33 2340571 1 - 31377067 A i canFam3.chr33 C 0 I 862 e mm10.chr16 32806886 716 + 98207768 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=514643.000000 s hg38.chr3_KI270937v1_alt 87009 632 + 165607 aagattaaaattagccaggtatggtggtgcacgcctgtagtcccagctacccaggaggctgagacagga-gatcacttgagcccagacgcaggaagctgaagtgagccatgatcacaccagcgcacttcagcctgggtgacagagcaagaccctgtctcaaaaaaaaaaaaaaaaaaaaa-------aaaaggaaaAgaaaagatagatttaacaaatggtgcttagacaactggataagcacatgcaaaagaatgcatttggactcctacctcaaaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgcggtggctcatgcctgtaatcccagcactttgggagaccaaggcaggcagatcacttgaggccaggagttcaacaccagcctggccaacatggtgaaaccc--gtctctactaaaaacacaaaaattagctgggcttggtagcatgcacctatagtcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcctgggcaacagagcaagactctgcctccaaaataaataaataaataaaaata s panTro4.chr3_GL389630_random 62867 641 - 103936 aagattaaaattagccaggtatggtggtgcatgcctgtagtcccggctaccccggaggctgagatagga-gatcacttgagcccagaagcaggaaactgaagtgagccatgatcacaccagtgcagttcagcctgggtgacagagcaagaccctgtctcaaaataaaaaaaaaaagaaaagaaaaagaaaaagaaaagaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaaaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgtggtggctcatgcctgtaatcccaacactttgggagaccaaggaaggcagatcgcttgaggccaggagttcaagaccagcctggccaacatggtgaaacccctgtctcgactaaaaatacaaaaattagctgggcttggtagcatgcacctatagtcccagctactcaggaggctgaggcaggagaactgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcctgggcaacagagcaagactctgcctccaaaaaaaataagtaaataaaaata i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2410499 634 - 202140232 aagattaacattagccaggtatggtggtgcatgcctgtagtcccagctacccaggaggctgagatagga-gatcacttgagcccagaagcaggaagctgaaatgagccatgatcacaccagtgcacttcagcctgggtgacagagcaagaccctgtctcaaaaaaaaagaaaagaaaaag-------aaaaagaaaagaaaagaCAGAtttaacaaatggtgcttggacaactggataagcacatgcaaaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgtggtggcttatgcctgtaatcccagcactttgggagaccaaggaaggcagatcacttgaggccaggagttcaagaccagcctggcaaacatggtgaaactgctgtctctactaaaaatacaaaaattagctgggaacggtaacatgcacctatggtcccagctactcaggaggctgaggcaagagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcctgggcaacagagcaagactctgtctccaaaaaaaataaataaataaaaata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2871446 631 - 123690457 aagattaaaat--------tatggtggtgcgtgcctgtagtcctggctacccaggaggctgagatagga-gatcacttgagcccagaaacaggaagttgaagtgagccatggtcataccagtgcacttcagcctggatgacagagcaagatcctgtctcaaaaaaaaaaaaaagaaaaga--aaaagaaaaagaaaagaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaaaagaatgcatttggactcctacctcacaccatatacaaatattaactcaaaatggaccatagacctaaatgtaagagctgaaactggctgggtgtggtggctcatgcctgtaatcccagcactttgggagactgaggcaggcagatcacttgaggccaggagttcaagaccagcctggcaaacatggtgaaacccctgtccctactaaaaatacaaaaattagctgggcatggtagcatgcacctatagtcccagatactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggttgcagtgagccaagattgcacaactgcactccagcctgggcagcagagcaagaatctgcctccaaaataaataaataaataaaaata i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73872509 633 + 74750902 tagactaaaattagccaggtgtggtggtacatgcctatagtcccagctacccagggggctgaggtaggaggagcacttgagcccagaagctggaagctgaaatgagccatgatcacaccactgcacttcagcctaggtgacagagcaagaccctgtctcaaaaaaaagaaaaagaaacaa-------agaaagaaaAgaaaagatagatttaacaaatggtgcttggacaactggataagcacatgcaagagaatgcatttggacccctacctcacaccgtatacaaatattaactcaaaatgtaccaaagacctaaatgtaagagctgaaactggccagtcatggtggctcacacctgtaatcttaacactttgagagacaaagacaggcagatcacttgaggccaggagttcaagaccagcctggccaacatggtaaaactcc-atctctactaataatacaaaaattagctgagcgtggtggtgagcaca-acagtcccagctacttgggaggctaaggcaggagaattgcttgaacccaggaggtgaaggttgctgtgagccaagattgcacaactgcactccagcctggacaacagagcaagactctatttcaaaaaaataaaaataaaCAGGggta i calJac3.chr17 C 0 I 9054 e mm10.chr16 32806886 716 + 98207768 I e canFam3.chr33 2340572 862 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=256001.000000 s hg38.chr3_KI270937v1_alt 87641 496 + 165607 aGTcaatcaaatttaaaactggacaaaggatttaaatagacatttctccaaagaagatacacaagtggccagtgagcatgaaagatactcaacatcattaatcataaggaaatgcaaatccaaaccacaatgagataccaccccacatccagtaggacggctaagataaaaaataaaacagcaagtgttggctgggtggggtggctcacacctgtaatcacggcacttgggaacactgagatgggtggatgacgagttcaggagtttgagaccatcctggccagcatagtgaaaccc-gtctctactaaaaatacaaaaattagctgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctggcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaaaagcaagtgttg s panTro4.chr3_GL389630_random 63508 495 - 103936 aGTCCATCAaatttaaaactggacaaaggatttaaatagacatttctccaaagaagatacacaagtggccagtgagcatgaaagatactcaacatcattaatcataaggaaatgcaaatccaaaccacaatgagataccaccccacatccattaggacggctaagataaaaaataaaatagcaagtgttggctgggtgcagtggctcacacctgtagtcacagtactttggaacaccgagacgggtggatcatgagttcaggagtttgagaccatcctggccagcatagtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcatgcacctgtagtcccagctactcaggaggctgaggcacgagaatctcttgaacccaggaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctagcgacagagcgagaccccatctcaaaaaaaaaaaaaaaaa--gcaagtgttg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2411133 492 - 202140232 aGTcaatcaaatttaaaactggacaaaggatttaaataaacatttctcaaaagaagatatacaagtggccagtgagcatgaaagatactcaacatcgttaatcataaggaaatgcaaatccaaaccacaatgagataccatcccacatccattaggatggctaagataaaaaataaaatagcaagtgttggctgggtgcagtggctcacacctgtaatcacagcactgtggaacactgagaagggtggatcacgagttcaggagtttgagaccatcctggccagcatagtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcacgagaatctcttgatcccaggagacagaggtcgcagtgagctgagatcatgccactgcactccagcctggtgacagagcgagactccatctcaaaaagaaaaaaaa-----gcaagtgttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2872077 489 - 123690457 aGTcaatcaaatttaaaactggacaaaggatttaaatagacatttctccaaagaagatatacaagtggccagtgagcatgaaagatattcaacatcattaataataaggaaatgcaaatccaaaccacaatgagataccaccccacatccattaggatggctaagataaaaaataaaatagcaagtgttggctgggtgcggtggctcacacctgtaatcacagcactttggaacactgagacgggtggatcacaagttcaggagtttgagaccatcctggccagcacagtgaaaccccgtctctactaaaaatacaaaaattagctaggtgtggcagcatgcacctgtagtcccagctactcgggaggctgaggcacgagaatctcctgaacccagaaggcagaggtcgcagtgagctgagatcacgccactgcactccagcctggcaacagtgcgagaccccatctcaaaaaaaaaaa--------gcaagtgttg i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32806886 716 + 98207768 I e calJac3.chr17 73873142 9054 + 74750902 I e canFam3.chr33 2340572 862 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=213493.000000 s hg38.chr3_KI270937v1_alt 88137 338 + 165607 aagtgttgctgagggtgtggagaaattggaaccctcatacactgctggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgaggtggcagcagaaaagaataaaaaaaaaaaagaa--aaaaaagaaaaacaatttgacagtttctcagaatg-taaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatgttcacacaaaaacctatcaatgaatattcatagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa s panTro4.chr3_GL389630_random 64003 340 - 103936 aagtgttgctgagggtgtggagaaactggaaccctcatacactgctggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgaggtggcagcagaaaataataaaaaaaagaaaaaagaaaaaaagaaaaacaatttgacagtttctcagaatg-taaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatgttcacacaaaaacctatcaatgaatattcatagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggctaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2411625 335 - 202140232 aagtgttgctgaggatgcggagaaattggaaccctcatacactgctggtggaattgcaaaatggtgcggccactttgaa----aatttagggagatgaggtggcagcagaaaagaataaaaaaagaaaaaag--aaaaaagaaaaacaatttgacagtttctcagaatgttaaacatagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt----------aggagaattaaaaacacatattcacacgaaaacctatcaatgaatattcctagcagtgttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggataa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2872566 328 - 123690457 aagtgttgctgaggatgtggagaaattggaaccctcatacactactggtggaattgcaaaatggtgcagccactttgaaaatcaatttggggagatgaggtggcagcagaaaagaataaaaaaa----------aaaaaagaaaaacaatttgacagtttctcagaatgttaaacacagag-ttgccatatgacccagaaaccctacttctgagcctgtagtt-------------agaattaaaaacacatgttcacatgaaaacctatcaatgaatattcatagcagagttattcataatagccaaatagtagaaacaattcaaatgcccttcaactgatgaatggataa i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2341434 293 - 31377067 aagtgttggtgagaatgtggagaaatcggaaccc-cacacattgc---tggaattgaagcatggcgcagccactctggaa------------------------------------------------------aacagaaaaaaacagtttggcagatcctcagaatgtttaacagagtgaaaaccatatgatgcagcaagcccatttctgagtatatgaaaataaacccagaagagaaatgaaaataca-gtccccataaaaacctgtacataaatgttcaaaggagcattattcataagtaccccaaagtggaaacaaatcaaatgtttgtcagctgatgaatggataa i canFam3.chr33 I 862 I 194 e mm10.chr16 32806886 716 + 98207768 I e calJac3.chr17 73873142 9054 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=216173.000000 s hg38.chr3_KI270937v1_alt 88475 303 + 165607 aactaaatctggtatatccatataatgggatattactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtattgtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtatattagtggttgccaggggctggtgagatgtgtggaccaggcagtgactgctgatgggt-cagagtttatttggggcataacaaacatgttctgaaattagacagaggtg s panTro4.chr3_GL389630_random 64343 304 - 103936 aactaaatctggtatatccatataatggaatattactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtattgtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtacattagtggttgccaggggctggtgagatgtgcggactaggcagtgactgctgatgggtacagagtttatttggggcataacaaacatgttctgaaattagacagaggtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2411960 304 - 202140232 aactaaatctggtatatccatataatggaatattactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaactcgaaa--acatgctaagtaaaagaagccactcacaaaaggccgtgtattgtatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtatattagcggttgccaggggctggtgagatgtggggactaggcagtgactgctgatgggtacagagtttatttggggcctaacaaacatgttctgaaattagacagaggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2872894 302 - 123690457 aactaaatctggtatatccgtataatggaatattactcagccataaaaaggaatgaagtacagatgcatgccacaacaacaatgaaacttgaaa--acatgctaagtgaaagaagccactcacaaaaggccgtgtattatatgattccatttatatgaaatgtttagaatagacaaatccatcaagacagaaagtacattagcggttgccaggggctggtgagatgtggggactaggcagtgactgctgatgggtacagagtttatttggggtgtaacaaacatgttctgaaattagac--agGTg i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2341921 305 - 31377067 aacaaactatggtacccctacacagtgggatactattcagccataataagaaatggagtcctgagacacacgacaacgtggatgaacctagaaacgaaatgctaagtgaaagcagtcagtgacaaatgcccacatattgtaggattccatttatgcgaaatgtccaccacggggaagcccatagagacgggaagtagattaatgtttgccaggggccag-gtggtatggggaacagggagtgactgctaaagggtacagggccacttttggggagtgaagaaatgttctgaaattagacaatggtg i canFam3.chr33 I 194 C 0 e mm10.chr16 32806886 716 + 98207768 I e calJac3.chr17 73873142 9054 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=58331.000000 s hg38.chr3_KI270937v1_alt 88778 109 + 165607 gccaggcgcagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc s panTro4.chr3_GL389630_random 64647 109 - 103936 gccaggtgcagtggctcacagctgtaatcccagcactttgggaggccgaggcaggcagatgatttgaggtcaggagtttgagactagcctggccaacgtggcaaaaccc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2412264 109 - 202140232 gccaggtgcagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcatttgaggtcaggagtttgagactagcctggccaacgtggcgaaaccc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2873196 109 - 123690457 gccaggcacagtggctcacacctgtaatctcagcactttgggaggccgaggtgggcagatcatttggggtcaggagtttgagactagcctggccaatgtggcgaaaccc i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32806886 716 + 98207768 I e calJac3.chr17 73873142 9054 + 74750902 I e canFam3.chr33 2342226 0 - 31377067 C e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=171994.000000 s hg38.chr3_KI270937v1_alt 88887 301 + 165607 tgtctctaccaaaaaGTGCCAAAAAAAtaaaataagacagcagtgatggttctgca--accctgtgaatacactgaacaacactgaaatgtacacatggtgaattgtacaaaagggtaaatctcacatcctgtaaattatctctcaataaagctgttattAA-------------------ACaga---gagagagagaagga--gagaaaagggggagataagatgaggacggtaatgggagtgacagc---gaagagaga-----aatagagaaaacagcagagaagagagtgcctaagaggg--agagaAACCCCTCCCCCACTCCCCACAGTT s panTro4.chr3_GL389630_random 64756 301 - 103936 tgtctctaccaaaaagtaccaaaaAAAtaaaataagacagcagtgatggttctgca--accctgtgaatacactaaacaacactgaaatgtacacacggtgaattgtacaaaagggtaaatctcacatcctgtaaattatctctcaataaagctgttattaa-------------------aaaga---gagagagagaagga--gagaaaagggggagataagatgaggacggtaatgggagtgacagt---gaagagaga-----aatagagaaaacagcagagaagagagtgcctaagaggg--agagaaaCCCCTCCCCCACTCCCCACAGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2412373 306 - 202140232 tgtctctaccaaaaagtaccaaaaAAAtaaaataagacagcagtgatggttttgca--accctgtgaatacactaaaaaacactgaaatgtacacatggtgaattgtacaaaagggtaaatttcacatcatgtaaattatctctcaataaagctattattaaa---------------aagacaga---gagagagagaagga--gagaaaagggggagataagatgaggatggtaatgggagggacagcaaagaagacaga-----aatagagaaaacagcagagaagagagTGCCTAAGAGG----GGGAAACCCCTCCCCCACTCTCCACAGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2873305 313 - 123690457 tgtctctaccaaaaagtaccaaaaAAAtaaaagaagacagcagtgatggttttgca--accctgtgaatacactaaaaaacactgaaatgtatacatggtgaattgtacaaaagggtaaatttcacatcatgtaaattatctctcaataaagctgttattaaa---------------aaGACAGG---GAGAGAGAGGAGGA--GAGAAAAGGGGGAGATAAGATGAGGAGGGTAACGGGAGTGACAGCAAAGAAGAGAGAAAGACAATCGAGAAAACAGCAGAGAAGAGAGTGCCTAAGAGGG--AGAGAAACCCCTCCCCCACTCCCCACAGTT i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2342226 269 - 31377067 ----------------------------------------------tttttttgcacgactctgtgaacacattaaaaaccactgaagtgtaccc-----------tttaaaaggatgaatttgatgttagaggcattatatctcaggaaagctgttattAAAGAGAGGCACAAGAGTGAGACGGAGCTGAGAGAAAGAAGGAAGGAGAGAGAAGAGAGACAAGAGGAGGCTGGCAG-GGATGTGGCGGGAAGGAAGAAAGAGAAGCAATAAAGTAAACAACAGACAGAAGTGTGAC-AAGAGGGACAGAGAAA---------AACCCCACAGAGTT i canFam3.chr33 C 0 C 0 e mm10.chr16 32806886 716 + 98207768 I e calJac3.chr17 73873142 9054 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=33744.000000 s hg38.chr3_KI270937v1_alt 89188 34 + 165607 AGAGGAAGGTCTTCCAGAGCCCTGTTTACAAACC s panTro4.chr3_GL389630_random 65057 34 - 103936 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2412679 34 - 202140232 AGAGGAAGGTCTTCCGGAGCCCTAGTTACAAACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2873618 34 - 123690457 AGAGGAAGGTCTTCCGGAGCCCTATTTACAAACC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882196 34 + 74750902 AGAGGAAGGTCTCCAGGAGCCCAGCTTACAAAAT i calJac3.chr17 I 9054 C 0 s canFam3.chr33 2342495 34 - 31377067 GGAGGAAGGTCGCCATGGTCCCTAATCACAAAGC i canFam3.chr33 C 0 C 0 e mm10.chr16 32806886 716 + 98207768 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=126268.000000 s hg38.chr3_KI270937v1_alt 89222 109 + 165607 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAATTGCTCAGCTCAGTTGTGATCTGGTCATTGTC-ATTCCCTCCAAGAGAAGGGGATGCATCTTCTTTAAGAG s panTro4.chr3_GL389630_random 65091 109 - 103936 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAATTGCTCAGCTCAGTTGTGATCTGGTCATTGTC-ATTCCCTCCAAGATAAGGGGATGCATCTTCTTTAAGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2412713 109 - 202140232 AGTTCTGCCAACTCTAC--CCCCTGCCCAAATTTCCCCAAATTGCTCAGCTCAGTTGTGATCTGGTCATTGTC-ATTCCCTCCAAGATAAGGGGATGCATCTTCTTTAAGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2873652 109 - 123690457 AGTTCTGCCGACTCTAC--CCCCTGCCCAAATTTCCCCAGATTGCTCAGCTCAGTTGTGATCTGGTCATTGTC-ATTCCCTCCAAGATAAGGGGATGCATCTTCTTTAAGAG i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882230 106 + 74750902 GGTTCTGCCAGCTCCAC--CCCCGGCC---ATTTCCCCAAAGTGCTTAGCTCAGCTGTGATCTGGTCTTGGTC-ATTCCCTCCAAGGTAAGGGGGTGCATCTTCGTTAAGAG i calJac3.chr17 C 0 I 308 s mm10.chr16 32807602 102 + 98207768 AGTTTCGTCAGCTCTGCTTCCCTAACC---ATTTCCCTAAGTTGCTCAACTCAGTGGTTATCTGTTTATTA---AACCAC----AAATAAGCAGGTGCACCTCTTTTAAGAG i mm10.chr16 I 716 I 1 s canFam3.chr33 2342529 107 - 31377067 GGTTTCATCAACCCTAA--TTCTAACC---ATTTTCCCAAGTTGCTCACTTCGATCATATCTGGGCTATTGCCTACCCACTACAGAGTGAGGGGGGTTATcttctttaaggg i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=1072644.000000 s hg38.chr3_KI270937v1_alt 89331 1063 + 165607 -TGCGGCAAGCAAGGCGTGGGCAGGAGGGACGCTGGCCCAGTTACCTGGCGAGTCTGTGGCTCAGGTGAGCAGGGGACCCAGGTGTTGTCAC-CCCAGGACTCTCAACACTCTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTTAGGGCTAAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACACGATCAACAGGGAGCAGGCCTCTGAGC-CCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGG-GCCAGCAGGTGTCCGGT---AGT----------GTGGTCTGGGGGGTCAAGACTCTGAAGGTGAGGGT-GGCC-TGGCT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTCTCCAGAGCCTGGTGCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGGAGTGGAAATAGAGCCCCAGGAGCCACCcagactaag-gttgccgacaatctgtgagactgagttcaattcagtggt-----------cataaccaacatttatttca--acaggatg--------------------------------------------------------------------------acactgaatgaaatagaatagaatagacccacatacattgtatg------taaaagtcaactg-agttc-tttttgaaatttctgttggtttttatacacacagatgcacttactgggtcagagtataaaatgtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGACAAGGGGAGAACCTTTTGCC-----------------------CATGGCTG----GGAGTCAAACCAGCAATCCTGACCTCTCCCCTGCTTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCACGTGCTACGGAGCTCTGCTGttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctcttccctcggcttggaaggcccttccctcccatatccattagaattaaatattct- s panTro4.chr3_GL389630_random 65200 1061 - 103936 -TGGAGCAAGCAAGGCGTGGGCAGGAGGGACGCTGGCCCAGCTACCTGGCGAGTCGGTGGCTCAGATGAGAAGGGGACCCAGGTGTTGTCAC-CCCAGGACTCTCAACACTCTTCTCCGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTTAGGGCTAAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACACGATCAACAGGGAGCAGGCCTCTGAGC-CCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGG-GCCAGCAGGTGTCTGGT---AGT----------GTGGTCTAGGGGGTCAAGACTCTGAAGGTGAGGGT-GGCC-TGGCT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTCTCCAGAGCCTGGTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAAGGGCTGGAGTGGAAATAGAGCCCCAGGAGCCACCcagactaag-gttgccgacaatttgtgagactgagttcaattcagtggt-----------cataaccaacatttatttca--acaggatg--------------------------------------------------------------------------acactgaatgaaatagaatagaatagacccacatacattgtatg------taaaagtcaattg-agttc-tttttgaaatttctgttggtttttatagacacagatgcacttactgggtcagagtataaaatgtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGACAAGGGGAGAACCTTTTGCC-----------------------CGTGGCTG----GGAGTCAAACCAGCAATCCTGACCTCTCCCC-GCTTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCACGTGCTACGGAGCTCTGCTGttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctgttccctcgg-ttggaaggcccttccctcccatatccattagaattaaatattct- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2412822 1057 - 202140232 -TGGGGCAAGCAAGGCATGGGCAGGAGGGATGTTGGCCCAGTTACCTGGTGAGTCTGTGACTCAGATGATAAGAGGACCCAGGTGTTGCCAC-CCCAGGACTCTCAACACTGTTCTCTGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACGCCTGGCTCTTTAGGGCTAAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGACAAGATCAACAGGGAGCAGGCCTCTGAGC-CCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGGAAACAGG-GCTAGCACTTGTCTGGT---AGT----------GTGGTCTGGGGGGTCAAGACTCTGAAGGTGAGGGT-GGCC-TGGCT-----------GGGGCCGCAGCCTCTGAGTGTGGCCTGGCTTTTGCCTCATGTTCAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCTCTTCTCATGTTGTCCCTCTTCTCCAGAGCCTGGTCCTGTGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAACGGCTGGAGTGGAAATAGAGCTCCAGAAGCCACCcagactaag-gttgccgacaatttgtgagactgaggtcaattcggtggt-----------cataaccaacatttatttca--acaggatg--------------------------------------------------------------------------acactgaatgaaatagaatagaatagacccgcatacattgtatg------taaaagtcaattg-agttc-tttttgaaatttctgttggtttttag----atggaggcacttactgggtcagagtaaaaaatgtatttattaaagtgaactggggccagaaacgttggaaagccactgATCTAGAGAGATGTCTTCATTGTATAGACAAGGGGAGAACCCTTTGCC-----------------------CATGGCTG----GGAGTCAAACCAGCAATCCTGACCTCTCCCC--TTTTCCCACCATATCATGCTCAGGGCTCTCACTCAAAAAGCCTCTTGTTGCACGTGCTactgagctctgctgttctctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagctgttccctcagcttggaaggcccttccctctcatatccattagaataaaatattct- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2873761 1059 - 123690457 -TGGGGCAAGCAAGGCGTGGGCAGGAGGGATGTTGGCCCAGTTACCTGGCGAGTCTGTGGCTCAGATGATAAGAGGACCCAGGTGTTGTCAC-CCCAGGACTCTCAACACTGTTCTCTGTCTACTTGACTTTGACCTTCCAAATTGCTTCCTGTTAGGTTAACACCTGGCTCTTTAGGGCTAAACTGGAGGGCTTTGTTTAGGGATAAACTTGAAGGCCTTTCAAAGTTGCCAAGATCAACAGGGAGCAGGCCTCTGAGC-CCTGTGGGCCTGGGTGTGGCTGAGCCAGTCTGTTGTGCAAACAGG-GCCAGCAGGTGTCTGGTAGAAGT----------GTGGTCTGGGGGGTCAAGACTCTGAAGGTGAGGGT-GGCC-TGGCT-----------GGGGCCACAGCCTCTGAGTTTGGCCTGGCTTTTGCCTCATATTGAGCTCAGGAGCCTCCTGCAAGTGATCAGCTTCCCTTCTCATATTGTCCCTCTTCCCCAGAGCCTCGTCCTGCGTCAGGTTGTCACCAAGACCAGGGATCAACCAGAAATGGCTGGAGTGGAAATAGAGCCCCAGGAGCCTCCcagactaag-gttgccgacagtttgtgagactgaggtcaattcggtgg------------cataaccaacattcacttca--acaggatg--------------------------------------------------------------------------acactgaatga-----aatagaatagacccacatacgttgtatg------taaaagtcaattg-agttc-tttttgaaatttctgttggtttttatagacacggatgcacttactgggtcagagtataaaatgtatttattaaagtgaatgggggccagaaacgttggaaagccactgATCTAGAGAGATGTCCTCATTGTATAGACAAGGGGAGAACCCTTTGCC-----------------------CATGGCTG----GGAGTCAAACCAGCAATCCTGACCTCTCCCCTGCTTTCCCACCATATCGTGCTCAGGGTCCTCACTCAAAAAGCCTCTTGTTGCATGTGCTactgagctctgctgttc-ctaaacaccctgcatt--------------------------------------ctcctgcctctgagcctttgctcaagttgttcccttggcttagaaggcccttccctcccatatccattagaacaaaatattct- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73882644 1055 + 74750902 -TGGGGCAAAGAAGGTATTGGCAGGAGGGACTACGGCCCA-TTACTTGGCAAGTCTATGGCTTCGGTGAGAAGCGGACCCAGGTGTTCTCAC-CGCAGGACTCTCAATGCTGTTC---AACTGCTTTACCTTGACCTTCCACATTGCTTCCTATTAGGTTAACACCTGACTGTTT-------------AGGGCTTTGTTTAGAGATAAACTCGAAGGCCTTTCAAAGTTGACAAGATCAACAGGGAGCAGGCCTCTAATC-CCCATGGGCCTGGGTGTGG-TGAGCCAGTCTGTTGTGGAAACAGG-GCCAGCAGGTGTCTGGTGGAAGGG----AAGCAGTGGTCTGGGAGGTCAAGA--CTGACGGTGAGGAT-GGGC-GGGCT-----------GGGACCACAGCCTCTGAGTCTAGCCTGGCTCCTGCCTCCTGTTGGGCTCCGGAGCGTCCTGCAAGTGATCAGCTTCCCTTCTCATGTTGTCCCTCTTCCCCAGATCCTGGTCCTGTATCAGGTTGTCACTGAGACCGGGGATCAACCAGAAAGGGCTGAAGCAGAAACAGAGCCCCAGGAACCA-TCAGACTAAG-CTTGCAAACCATCTGTGAGTCTGAGAGC---------------------------CTCAGACATATTTTA--ACGGGATG--------------------------------------------------------------------------ACGCTGaatgaaacagaataggataggcccacatacgctgcatg------taaaagtaaatgg-agttc-tttctgaagcttttgttggtttttacacacatggatgcatttactgggtaaaagtataacatgtatttattcatgtgaatt-gggccagaaacgtgtgaaagccactgATCTAGACAGATGTCCTCATTGCGTAGACGAGGGGAGAGCCCTTTTCCGGTGGTCATGCTTCAGTTGTTGACACAGCTG----GGAGTCAAACCAGCAATCCTGACTTCTTCCT-GCTTTCCCACCACGTTATGCTCAGGATCCTCACTCAGAAAGCCTCTTGTTGCACGTGCTACCGAGCCCTGCTGttctccaaacaccctacctt--------------------------------------ctcctgcctctgagcc-ttgctcaagctgttccctctgcttggaaggctctcccctcccgtatccaTTAGAAGAAAATATTCT- i calJac3.chr17 I 308 I 5474 s mm10.chr16 32807705 921 + 98207768 -TAGGAAAAAATGAAACTGGGCAGGCGGG--GGTGAGGTATGTTCCTGGAGAGTC--TGGTTCATGGGAC---TGGGCCCAGATAGCTTAAT-TTTAA---TTTTAATGCTGCTT------------GCTTT---CTTTTCAATTGATTCCTGTTAGCTTAGCACCTGCC-----------------AGGGGCCTTGTTTAAGGATAAACTTG-AGGACTTTCAGAGTTGACAGGGTCAACA-GAAGCTGGCCTTTGAAAGGAAGCAAGGCTGGGTGTGGCCAAGCCAAAGTGTTGTGAAAACAGG-A---------GTCTGA----AGTGCAGAGAGCAGAGGTCCGGGA-------CCTCTCAAAGTAAGAGT-GGGCAGGGCT-----------GGGGCTCTGG---CTGAGCCT---CAGGCTCCAG-TTCACACTCAGTTCAGGGGCCTCCTACTGGTGGCTTAC-TCCATCCCTAAGCCATCCCTCTTCTCAAGCATCT----------------------AAGACCAAGAATCAACT--AAAGAGCAAGGGTGGGAGAAGCGT------------CCAAATGAAG-GGTGGC-CTTGTTTGTGAATCAGAGATCAATCCGATGGTGTTTACTTTACTGTGACTGATGGGCAGTGTGACACAGGATGGAATGGAGCC----------------------------------------------------------------AGGCAGAATTAAATTGAACCAAATAGACCTGCATGCATTAAATA------CAAGAATAAGTTG--------CTTTAAAAGTTGCCTTAGCTC-------CATGGATGAGTGAACTAGGTCACAGAACAATTAATGCTTGTAAAAATGGATCGGAGCCAGAAAAGCCTGAAAG-------TCTAGAGAGAGGCTCTCATTCTATAGATGGAGGATGGTACCCAAAGC-----------------------CATGCTTGAGCTGGCTGCAAACCTGGAGAAGCAGCATCTTTCTGGCTTTCCTATCACCCCGCTCCCAAGAGTGTC--------------------------------------------------ACACCTTGCCTG--------------------------------------CACCTGCTTCTGAGCCTTGGTGTATGCTGTGTCATCAGCTTGGGAGGCCTGTC-----CAAATCCATTAGCAGAAATGGTTCT- i mm10.chr16 I 1 I 1 s canFam3.chr33 2342636 1171 - 31377067 aaggggaaagcaaggcattggcaggtagggatgtggcccagg----tggtgagtcagtggctcaggggggaatgagccccaggggatctcacacccaggactctcagtgctgttctttctctgctTTACCTTGACCTACCCAGTCACCTCCTGTCAGCTTAGCACCTGC-------------------GGGGCTTTGTTTATGGATAAACTTGAGGGCCTTCCAAAGTTGACAAGATCAACAAGGAGCAGGCTCCTGAGAGGATGTGGGGCTAGGTGTGGTCAGCCTGGCCTGTTATGGAAACAGGCACCAGTAGGTGTCCGGTGAGAGG----GGAGCAGTAGCCTGGGAGGTCAGACCTCTCAAGGTGACGGCAGGCC-AGGCTCGGGGGGGTTGGGGGGGATGGCCTCTGAGTTTGGCCTGGCTTCTGCTTCTTGTTGGGC-AAGGAGCCTCCTGCAAATGATTAGTTCCCCTTCTCACATCATCCCTCTTCCCAAGTTCCTGGTTCAGTGCCAGGTTGTCACCAATACCA-GGATGGATCAAAGAGGGCTGGATATGGAAAAAAGCCCTAGAGAttatccaaacaaagagttgtagcacatatgtgagtcagaaatcaattcagtggt-----------catgactggcatttatttta--gtaagatggaatggagcaaaatggatggaagagaatggaaaggaatagaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaatggaagatatccacatacatcatatatataattataagttatttggagttcttttttgaaattttt----gtttttatatacatgtacgtgtgcactgaatcaccgtgtataatatattcattaatgtgaattgtggccagaaaagtttgaaagctactgATctaga----------------------aatggaaaagccgttttccaaaggtcatgcttgagtgggagacagagctg----ggaggagaaccgacaattctgactgcctccctgctttttccgcac--------cgggcttctcATTCACACAACCTGTTGTTACACTTGCTACCGATCTCTGCCACTCTctcaacaccctgcattaaaaaacaaaacaaaacaaaacaaaaccaccctgcatactgctgctctggagtctttgctcaagctgtctcctctgt---gtaagcgcttccctcccatagccactaaaggaaagcattctt i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=39300.000000 s hg38.chr3_KI270937v1_alt 90394 48 + 165607 atgcttcaaggcagcatttgaagacaacttccccCGgggtgccgagga s panTro4.chr3_GL389630_random 66261 48 - 103936 atgcttcaaggcagcatttgaagacaacttccccCGgggtgccgagga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2413879 48 - 202140232 atgcttcaaggcagcatttgaagacaacttcccccggggtgccaagga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2874820 48 - 123690457 atgcttcaaggcGGCATTTGAAGACAACTTCCCCCagggtgctgagga i nomLeu3.chr11 C 0 C 0 s mm10.chr16 32808627 48 + 98207768 ACATATCAAGGTCACACTTGAACCCAGCCTTCCttcagctataaagga i mm10.chr16 I 1 I 1273 s canFam3.chr33 2343807 48 - 31377067 ctccttcaagGTCATGTTTaaattcattcttccctgggttgctaagga i canFam3.chr33 C 0 C 0 e calJac3.chr17 73883699 5474 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=191786.000000 s hg38.chr3_KI270937v1_alt 90442 296 + 165607 gctagctcattattatgaagatgaaaaataaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaatatcttcacgacagagaaccttcggctaacaagtgcagaaagaatga------tagaaaagcactacttggcagcccctaatgagaagtggatctcagcacaaatc---------------attagtggaca------------gaat-tttataatgggtgcac--------tatctggtggatgaagtttaacaccagtaaaagtgggacagctggacactttgtgtctccttcgaggtgcgataggaag s panTro4.chr3_GL389630_random 66309 296 - 103936 gctagctcattattatgaaaatggtaagtaaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaatatcttcacgatagagaaccttcggctaataagtgcagaaagaatga------tagaaaagcaccacttggcagcccctaatgagaagtggatctcagcacaaatc---------------attagtggaca------------ggat-tttataatgggtgcac--------tatctggtggatgaagtttaacaccagtaaaagtgggacagctggacactttgtgtctccttcaaggcgcgataggaag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2413927 292 - 202140232 gctagctcattattacaaaaatgataaataaagaatcaaacattgatccagcctttccatccaagccaaatagttgacaagggaaatatcttcatgatagagaaacttcggctaacaagtgcacaaagaacaa------tagaaaagcactacttggcagcccctaatgaaaagtggatctcagcacaaatc---------------attagtggaca------------gaat-tttatcatgggtgcac--------tatctggtggatgaagtttaacaccagtaaaagtgggacagctgggcactttgtgtctc---agaggtgtgata-gaag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2874868 296 - 123690457 gctagctcattattacgaaaatgataaagaaagaatcaaacattgatccagcctttccatccaagcaaaatagttgacaagggaaatatcttcacgatagagaaacttcggccaacacgtgcagaaagaacaa------tagaaaagcactacttggcagcccctaataaaaagtggatctcagcacaaatc---------------attagtggaca------------gaat-tttataatgggtgcac--------tatctggtggatgaagtttaacaccagtaaaagtgggacagctggacactttgtgtctccttcgaggcacaataggaag i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2343855 332 - 31377067 acaggctcattatcctgaaaatggtaaatgaagaattaaacatttatccagcctttccatacaagccaagtggttgacaagggaaaagtcttt---atagaagaattgcagctaagaaatgcagaaggagtgacagagctagaaagccagcattcggtgacccataa-gaaaattggatctaagcaacaatcaacgccgggattaaaaccactggagaaaggttgcaggggaatgtttataagggacctacaacagatgcatctggcagatcaaggttaaca-tagc-aaggtgggaccactggacttcgggtgtcttctttgggatgcaacaggaag i canFam3.chr33 C 0 I 234 e mm10.chr16 32808675 1273 + 98207768 I e calJac3.chr17 73883699 5474 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=24710.000000 s hg38.chr3_KI270937v1_alt 90738 49 + 165607 tacccacctatggattcttcctgcctaagaaatctccagtcctg-----atctc s panTro4.chr3_GL389630_random 66605 49 - 103936 tacccacctatggattcttcctgccaaagaaatctccagtcctg-----atctc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2414219 54 - 202140232 tacccacctatggattcttcctgccaaagaaatctccagtcctgatctcatctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2875164 54 - 123690457 tacccatctatggattcttcctgtcaaagaaatctccagtcctgatttcatctc i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32808675 1273 + 98207768 I e calJac3.chr17 73883699 5474 + 74750902 I e canFam3.chr33 2344187 234 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=164172.000000 s hg38.chr3_KI270937v1_alt 90787 244 + 165607 aactaccagagttcaggaaagacagagg-cagagggacatccacaaagattcaatcagtcaaacccagaaggtaggatatgccgcaggacacagtacctggttcgttcaacagctaa---------------atgacatgaaaaaatggcactgatctaggtatagatttaaagacatttaagaaatatgctagttaaacat-gtgtgcg-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt s panTro4.chr3_GL389630_random 66654 242 - 103936 aactaccagagttcaggaaagacagagg-cagagggatatccacaaggattcaatcagccaaacccagaaggtaggatatgctgcaggacacagtacctggtttgttcaacaactaa---------------atgacatgaaaaaatggcactgatctaggtatagatttaaagacatttaagaaatatgctagttaaac---gtgtgca-tatcttttttggatcttgacttgaataaaccagctgtaaaaaggcattttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2414273 244 - 202140232 aactaccagatttcaggaaagacagagg-cagagggacatccacaaagattcaatcagccaaacccagaaggtaggatatgccacaggacacagtatctgcttcgttcaacaactaa---------------atgacatcaaaaaatggcactgatctaggtatagatttaaaggcatttaagaaatacgctagttaaacat-gtgtgcg-taccttttttggatcttgacttgaataaaccagctgtaaaaaGGCAttttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2875218 245 - 123690457 aattaccagatttcaggaaagacggagg-cagagcgacatccacaaagattcaatcagccaaacccagaaggtaggatatgccgcgggacacagtgcctggttcgttcaacaactaa---------------atgacatcaaaaaatggcactgatctaggtatagatttaaagacatttaagaaatatgctagttaaacat-gtgtgcgttatcttttttggatcttgacttgaagaagccagctgtaaaaaggcgttttt i nomLeu3.chr11 C 0 C 0 s canFam3.chr33 2344421 252 - 31377067 aattaccaggtttcagcaaatgtaggggacagaggggcatccacatgggttcaatcagataaatccagagtgtaggacattctacagaacaaatcacctggtttattcaataattaaaaaaaaaacagcttgaagaaaaaggaaaaggggactg--------atagatttgaaggggcttaagaaatataccagttaaatataacttgtg-gaccttgtttggatcctga-ttggataagccaattgcaaaaaggtcttttt i canFam3.chr33 I 234 I 1572 e mm10.chr16 32808675 1273 + 98207768 I e calJac3.chr17 73883699 5474 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=437558.000000 s hg38.chr3_KI270937v1_alt 91031 921 + 165607 ctttctttcttttttttttt-----------------------------------------tttttttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggtcacagctcgctgcagccgcaacttctggggctcaagcaattttctcacttcagccttctgaatagctgggactataggtgaacatcaacacaccttgctaatttttaaacaa--attttttttttgtagagactgagtctcgctattgtacccaggctggtctcaaactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctgatcttattttttctttttctcttctgctttgctgctgaataacaagatatttttgacaagtgggggaaatatgaacactgataggtattaaacgatagtaagtagttttttaaattaattaattaattaattttttttttaaagacagagtcttgctctgttgcccaggctggagtgcagtggcgcaatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtcttgaacttctggcctcaggcgatctgcccgcctcagtctctcaaagtgttgggattacaggtgtgcgaccatatttgttttggctctgataaggtattgtggttata-ttttttaaatatgggggataagagcttgagcataatgttgataatattgaaggtggccaactggtaccttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacaataaatagctTTGGG--ttttttttttt s panTro4.chr3_GL389630_random 66896 905 - 103936 ctttctttc--------------------------------------------------------tttttttttttttgagacatggtctcactcggtgcagcagactggaatgcagtggtatggttacagctcgctgcagccgcaacctctggggctcaagcaattttctcacttcagccttctgaatagctgggactataggtgaacatcaacacac----ctaatttttaaacaatttttttttttttgtagagactgagtctcgctattgtacccaggctggtctcaaactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccacatctgacctttttttttctttttctcttctgctttgctgctgaataacaagatatttttgacaagtgggggaaatatgaacactgataggtattaaatgatagtaagtagtttttaaaattaattaattaattagtttttttttaaaagacagagtcttgctctgttgcccaggctggagtgcagtggtgcaatctcggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggtacccgccaccatgcctagctaatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtgttgaatttctggcctcaggtgatctgcccgcctcagtctctcaaagtgttgggattacaggtgtgcggccatatttgttttggctctgataaggtattgtggttata-ttttttaaaTATGGGGGataagagcttgagcataatgttgataatattgaaggtggccaaccggtaccttgggttcatcatcctattctctttacttttgcatgtgtttgaatttttccacaataaatagctTTGGG-tttttttttttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2414517 903 - 202140232 ctttctttc-------------------------------------------------------ttttttttttttttgagacatggtctcactcagtgcagcagactggaatgcagtcgtacggtcacagctcgctgcagccacaacctctggggctcaagcaattttctcacttcagccttctgaacagctgggactataggtggacatcaacacaccttgctaatttttaaacaa--aatttttttttgtagagactgagtctcgctattatacccaggctggcctcaaactcctgagctccagcgatcctcccatcttggcctcccaaagtgctgagaccacaggcatcagccaccgcacctgAACT--TTTTTTCTTTTTCTCTTCAGCTTTGCTGCTGAAAAACAAGATATTTTTGACAAGTGTGGGAAATATGAACACTGATAGGTATTAAACGATAGTAAGTAGTTTTT--AATTAATTAATTAAtttgttttttt---agagacagagtcttgctctgttgcccaggctggagtgcagtggtgcagtcttggctcactgcaacctccacctccctggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatccgccaccatgcctagataatttttgtatttttagtagacacaggggtttcaccatgttggccaggctggtcttgaacttctggcctcaggtgatctgcccacctcagtctcccaatgtgttgggattacaggtgtgTGGCCATATTTGTTTTGGCTCTGATAAGGCATTGTGGTTATATTTTTTTAAATATGAGGGATAAGAGCTTGagtaaaatgttgataattttgaagctggccagctggtaccttgggttcatcatcctattctctccacttttgcatgtgtttgaatttttccataataaaCAGTTTTGGGttttttttttttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2875463 925 - 123690457 ctttctttctttctttctttctttctttctttctttctttctttctttcgttcgttcgttctttcGttttttttttttgagacatggtctcactcagtgcagcagactggaatgcagtggtacgatcacagctcgctgcagctgcaacctctggggctcaagcaattttcc--------------------------ctataggtggacatcaacacaccttgctaatttttaaacaa--aa---ttttttgtagcgactgagtcttactattgtacccaggctggtctcaaactcctgagctccagtgatcctcccaccttggcctcccaaagtgctgggactacaggcatcagccaccgcacctgacctttttttttctttttctcttctgctttgctgctgaaaaa-aagatatttttgacaagtgggggaaatatgaacactgataggtattaaatgatagtaagtagttttt-----aaattaattaattatttttttttttagagacagagtcttgctctgttgcccaggctggagtgcagtggtgcaatcttggctcactgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacccgccaccatgcctagctaatttttgtatttttggtagagacaggggtttcaccatgttggccaggctggtcttgaactcctggcctcaggtgatctgcctgcctcagtctcccaaagtgttgggattacaggtgtgcagccatatttgttttggctctgataaggtattgtggttata-ttTTTCAAATATGGGGGATAAGAGCTTGAgcaaaatgttgataattttgaagctggccagctggtaccttgggttcatcatcctattctctctacttttgcgtgtgtttgaatttttccataataaatagttT--GG--ttttctttttt i nomLeu3.chr11 C 0 C 0 e mm10.chr16 32808675 1273 + 98207768 I e calJac3.chr17 73883699 5474 + 74750902 I e canFam3.chr33 2344673 1572 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=7226.000000 s hg38.chr3_KI270937v1_alt 91952 11 + 165607 tttttttcctg s panTro4.chr3_GL389630_random 67801 11 - 103936 tttttttcctg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2415420 11 - 202140232 ttttttttttg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2876388 11 - 123690457 ttttttttttg i nomLeu3.chr11 C 0 I 2329 s calJac3.chr17 73889173 11 + 74750902 TTCTTTCCCCG i calJac3.chr17 I 5474 I 4 e mm10.chr16 32808675 1273 + 98207768 I e canFam3.chr33 2344673 1572 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=3718.000000 s hg38.chr3_KI270937v1_alt 91963 5 + 165607 agatg s panTro4.chr3_GL389630_random 67812 5 - 103936 agatg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2415431 5 - 202140232 agatg i ponAbe2.chr3 C 0 I 3419 s nomLeu3.chr11 2878728 5 - 123690457 agatg i nomLeu3.chr11 I 2329 C 0 s calJac3.chr17 73889188 5 + 74750902 agaca i calJac3.chr17 I 4 C 0 e mm10.chr16 32808675 1273 + 98207768 I e canFam3.chr33 2344673 1572 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=743826.000000 s hg38.chr3_KI270937v1_alt 91968 1002 + 165607 gagtctccctctgtcacccaggctagagcgcagtggcgcaatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgta-ttttaatagcgatggtatttcaccatgttacccaggctggtcttgaactcctgacctcaagtgatccacccgtctcggcctctcaaagtgctgggattacaggcgtgagccaccgcacccagccAAGAAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccccataagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacatgtgctgggacatgtggctttccatgtggaaaacaaacatgtaaataaatatatatataaaccatctaggtttatgtaaactctcgatttcattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtgtctccatcatta--agcaacagctgactgTGTTCCTACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTCTAGggccaggcacggtggctcacacctgtaatcccaacactttgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccctgtctctatttaaaatgccaaaaattagccaggcatggtggtgcatgcctataatcccagctactcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccagcctggcgggggacagagc-agactctgtctggaaaaaaaaaaattaaaa----agagagagagaggagagagag s panTro4.chr3_GL389630_random 67817 987 - 103936 gagtctccctctgttacccaggctagagcgcagtggcacgatctcgggtcactgcaacctctgtctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgta-ttttaacagcgatggtatttcaccatgttacccaggctggtcttgaactcctgacctcaagtgatgcacccgtctcggcctctcaaagtgctgggattacaggcgtgagccaccgcacccggccAAGAAGTAcagccttgtgccacatcacgatgtttagaccgatgatggaccatatatatgacggtggccccgtaagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacatttgctgggacatgtggctttccatgtggaaaacaaacacgtaaataaatatatatatataccatctaggtttatgtaaactctcgattttattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtatctccatcatta--agcaacagctgactgtgttcctaccaatgacatctagttttctcccaagagaagttctagggccaggcatggtggctcacgcctgtaatcccaacactttgggaggcggaggtgggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccctgtctctatttaaaatgccaaaaattagccaggcatggtggtgcatgcctataatcccagctactcgggaggctgaggcaggagaatggcttgaacccagaaggtggaggttgcagtgagccgagatcgtaccactgcactccagcctggcgggggacagagc-agactctgtctgaaaaaaaaaaaa--aaaa-----------------agagagag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2418855 996 - 202140232 gagtctccctctgtcacccaggctggagtgcagtggcacagtcttggctcactgcaacctctttctcccaggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccagcgcacctggctaatttttgta-ttttaatggcgatggtatttcaccatgttagccaggctggtcttgaactcctgacctcaagtgatccacccatctcagcctctcaaagtgctgggattacaggcatgagccaccacgcctggccAAGAAGTAAagccttgtgccacatcacgatgtttagactgatgatggaccatatatatgacagtggccccgtaagattataatagggcatatgcagaaacccgatatatggtgctcgatattggccttgaggatcaagcaggggaaatgactgatgttcagtaatgggacattggctgggacatgtggttttccacgtggaaaacaaacatataa--------atatatataccatctaggtttatgtaaactctcgatttcattgttgtgtgaactctatgatattcatacaacaaagaaatcatctgatgatgcatttctcagaatgtatctccattatta--agcaacagctgactCTGTTCCTACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTCTAGggccgggcacggtggctcacgtctgtaatcccaacactttgggaggcagaggcaggcagatcacctgaagtcagaagttcaagactagcctggctaacatggcgaaaccttgtctctatttaaaatgccataaattagccaggcatggtggtgcatgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaacccagaaggtggagattgcagtgagccgagatcgtaccactgcactccagcctggcaggggacagagc-agactctgtctgaaaaaaaaaaaa--aaaaaaaaaaaaaaaaaaaaGAGAGAGAG i ponAbe2.chr3 I 3419 C 0 s nomLeu3.chr11 2878733 973 - 123690457 gagtctccctctgtcacccaggctggagcacagtcacgccatctcggctcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctggga------ttacaggcacccaccaccacacctggctaatttttgtatttttagtagcgatggtatttctccatgttagccaggctggtcttgaactcctgacctcaagtgatccatccatctcagcttctcaaagtgctgagattacaggcgtgagccactgcgcccggccAAGAAGTAcagccttgtgccacatcatgatgtttagaccgatgatggaccatatatatgacggtggccctgtaagattataatagggcagatgcagaaacccaatatatggcacttgatattggccttgaggatcaagcaggggaaatgactgatattgagtaatgggacatttgctgggacatgtggctttccatttggaaaacaaacatataaataa----atatatataccatctaggtttatgtaaactctggatttca---ttgtgtgaactctatgatattcatacaaaaatgaaatcgtctgatgatgcatttctcagaatgtatctccatcatta--agcaacagctgactgTGTTCCCACCAATGACATCTAGTTTTCTCCCAAGAGAAGTTGTAGggccgggca--gtgactcaggcctgtaatcccagcactttgggaggtggaggcgggcagatcacctgaagtcagaagttcgagactagcctggctaacatggcgaaaccctgcctctatttaaaatgccaaaaattggccaggcatggtggtgcacgcctataatcccagctactcgggaggctaaggcaggagaatcgcttgaacccagaaggtggaggttgcagtgagccgagatcataccactgcactccagcctggcagcggacagagc-agactctgtctgaaaaaaaaaaaa-------------------------agagag i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73889193 960 + 74750902 gaatctccctctgccgcccaggctggagtgcagtggtgagatattggctcactgcaacctccacctcccagattcaagtgattcccctgtctcagcctcccaagtagctgagacaaggcctacaggtgtgcaccaccgcatccggctaatttttgtatttttaatagagatggggtttcaccatgttggccagggtggtcttgaactcctgacctc--gtgatctgcccaagtcagcctctcaaagtgctgggattatagatgtgagccaccacacccggccAAGAAGAATACtcttgcaccacataatgatgtttagaccaatgaggaaccatatatatgacggcggtcccgtaagagtataatagggcgtatgcagaaacccagtagatgccacttgatactggcattgtgggtcaagcaggggaaatgactgat----agtaacgggacatttgctgggacacttggcttctcatgtggaaaacatacttataaataaaa--atacatatattatctaggtttatgtaaactct--gtttcattgccgtgtgaactctctggtgttcatacaacagtgaaactgtctgatgatgcgtttcttagaatgaatctccattatcaTTACTATTACCTGACTATGTTCCTTCCAGTGACATCTACTTATCTCCCAAGAG-AGCTCTGGTg-------------ctcacgcctgtaatcc--agactttgggaggcagaggtgggcagatcacctgaagtgaggagttcaagaccagcgtggccaacacggtgaaaccccatctctattcaaaatgccaaaaattagccaggcatggtgctgtgcacctgtaatcccagctactcgggaggctgagacaggagaatcgcttgaacgcagaaggcggaggttgcagtgaaccgagatcacgccactgcactcgcgcctggt---ggacagagcaagactctgtttcaaaagaaagaaa--aaaa------------------------- i calJac3.chr17 C 0 C 0 e mm10.chr16 32808675 1273 + 98207768 I e canFam3.chr33 2344673 1572 - 31377067 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=29058.000000 s hg38.chr3_KI270937v1_alt 92970 32 + 165607 agagaAGTTCTAGTAAATGCAACTGTATTCAC s panTro4.chr3_GL389630_random 68804 32 - 103936 agagaagttctagtaaatgcaactgtattcac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2419851 32 - 202140232 AGAGAAGTCCTAGTAAATGCAACTGTATTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2879706 32 - 123690457 agagaaGTTCTAGTAAATGTAACTGTATTCAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890153 30 + 74750902 -gagaaGTTCTAGTAAATGCAATGTTATTC-C i calJac3.chr17 C 0 C 0 s canFam3.chr33 2346245 31 - 31377067 aaagacattctagtaaatacaactttatcgt- i canFam3.chr33 I 1572 C 0 e mm10.chr16 32808675 1273 + 98207768 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=774790.000000 s hg38.chr3_KI270937v1_alt 93002 750 + 165607 CCTGTTGTATTTCCAGGGATG-TTTGAATAAACCCAGTAGACTGGTGCCTGGAAATTG-CCCAGTGAGTCTGCCTGTTAATCTGGATCTGGGTTTATCACACCTACCTTCCCTCCTGTCCCGTCCACCCCAG----CCACCCACAGTGCCCACGCTG-CCTCTATCCGAGGGAG-CATCCTCTGGATACT----------------------AGACCCTCCCAAGCTGATCATCCAAAGACATCTTATCCAGATATAAA----ACTGGATACACAAAGAAGCCACATCAACCATATAGTCGGTACTTAATAAGTGTCtgaatacatgaattatttgatta-atgaattaatgaatgCTGGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAGATTAATTGATTGAATGAATGA---GAGAGCAGAGATTGGGGTCTCTTTGACCTGTAGCACAGATGCCAGCCTAG--CTCCTCACCTGTCTTC---------ACCCCAAGGCTCAGCCACAGCAGGAGGAGGAGGACCAGCCACGTGGCAGCAGGCATCAAGCAGAGATAGAAGTGCTGCAGCGTCCAAGGCCTGGTCTTTAAATATCCACCCATCCCAGCCAGCCCACCTGGTTCCTCCCTACTCCTGGGGAGGAACCAG--CAGACACCTGGGCAGTCACTGGCAGACAGCA-------GG----------------AGTGACACAGGTATCCCAGCTGCTTGAAATAGCTCACCCAAGCAGAGGTAA----------------------------TTTTGACATCCTGGAAACTCCAGCCTCCAGGGGAAGAATCTGAAAAACCAGAGTGACAAA------- s panTro4.chr3_GL389630_random 68836 746 - 103936 cctgttgtatttccagggatg-tttgaataaacccagtagactggtgcctggaaattg-cccagtgagtatgcctgttaatctggatctgGGTTTATCACACCTACCTTCCCTCCTGTCCCGTCCACCCCAG----CTACCCACAGTGCCCACGCTG-CCTCTATCCGAGGGAG-CATCCTCTGGATACT----------------------AGACCCTCCCAAGCTAATCATCCAAAGACATCTTATCCAGATATAAA----ACTGGATACACAAAGAAGCCACATCAACCATATAGTCGGTACTTAATAAGTGTCTGAATACACGAATTATTTGATTA-ATGAATTAATGAATGCTGGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAG----ATTGATTGAATGAATGA---GAGAGCAGAGACTGGGGTCTCTTTGACCTGTAGCACAGATGCCAGCCTAG--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAGCCACAGCAAGAGGAGGAGGACCAGCCACGTGGCAGCAGGCATCAAGCAGAGATAGAAGTGCTGCGGCGTCCAAGGCCTGGTCTTTAAATATCCACCCATCCCAGCCAGCCCACCTGGTTCCTCCCTACTCCTGGGGAGGAACCAG--CAGACACCTGGGCAGTCACTGGCAGACAGCA-------GG----------------AGTGACACAGGTATCCCAGCTGCTTGAAATAGCTCACCCAAGCAGAGGTAA----------------------------TTTTGACATCCTGGAAACTCCAGCCTCCAGGGGAAGAATCTGAAAAACCagagtgacaaa------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2419883 751 - 202140232 CCTGTTGTATTTCCAGGGATG-TTTTAATAAACCCAGTAGACTGGTGCCTGGAAATTGCCCCAGTGAGTCTGCCTATT-ATCTGGATCTGGGTTTATCACACCTACCTTCCCTCCTGTCCCATCCACCCCAG----CCACCCACAGTGCCCACGCTG-CCTCTATCCAAGGGAGCCATCCTCTGGATACT----------------------AGACCCTCCCAAGCTAATCATCCAAAGACATCTTATCCAGAAATAAA----ACTGGATACACAAAGAAGCCACATCAAGCATATAGTCAGTACTTAATAAGCATCTGAATATATGAATTATTTGATTA-ATGAATTAATGAATGCTAGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAGATTAATTGATTGAACGAATGA---GAGAGCAGAGACCGGGGTCTCTCTGACCTGCAGCACAGATGCCAGCCTAG--CTCCTCACCTGTCTTC---------ATCCCGGGGCTCAGTCACGGCAGGAGGAGGAGGACCAGCCACATGGCAGCAGGCCTCAAGCAGAGATACAAGTGCTGCAGCGTCCAAGGCCTGGTCTTTAAATATCCACCCATCCCAGCCAGCCCACCTGGTTCCTCCCTACTCCTGGGGAGGAACCAG--CGGACACCTGGGCAGTCACTGGCAGACAGCA-------GG----------------AGTGACACAGGTATCCCAGCTGCTTGGAATAGCTCACCCAAGCAGAGGTAA----------------------------TTTTCACATCCTGGAAACTCCAGTCTCCACGGGAAGAATCTGAAAAACCagagtgacaaa------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2879738 763 - 123690457 CCTGTTGTATTTCCAGGGATG-TTTTAATAAACCCAATAGACTGGTGCCTGGAAATTG-CCCAATGAGTCTGCCTATTAATCTGGATCTGGGTTTATCATGCCTACCTT-CCTCCTGTCCCATCCATCCCAG----CCACCCGCAGTGCCCACACTG-CCTCTATCCGAGGGAG-CTTCCTCTGGATACTCCAT-AACTCCCCAACCAAAACAGACCCTCCCAAGCTAATCACCCAAAGACATCTTATCCATATATAAA----ACTGGATACACAAAGAAGCCACATCAGGCATATAGTTGGTACTTAATAAGTGTCTGAATACataaattatttgatta-atgaattaatgaatGCTAGGTCACAGGAGGTGG---GTCATGCCAGAGACAAAACAG----ATTGATTGAATGAATGA---GAGAGCAGAGATTGGGGTCTCTTTGACCTGTAGCACAGATGCCAGCCTAG--CTCCTCACCTGTCTTC---------ACCCCGGGGCTCAGCCACAGCAGGAGGAGGAA---CAGCCACATGGCAGCAGGCATCAAGCAGAGATAGAAGTGCTGCAGTGTTCAAGGCCTGGTCTTTAAATATCCACCTATCCCAGCCAGCCCACCTGGTTCCTCCCTGCTCCTGGGGAGGAACCAG--CGGACACCTGGGCAGTCACTGGCAGACAGCA-------GG----------------AGTGACACAGGTATCCCAGCTGCTTGGAATAGCTCACCCAAGCAGAGGTTA----------------------------TTTTCACATCCTGGAAACTCCAGTCTCCAGGGGAAGAATCTGAAAAACCagagtgacaaa------- i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890183 735 + 74750902 CCCGTTGTATTTCCAGGGATG-TTTTAATAAACCCGGTGGACTGGTGCCTGGCTACTG-CCCAGTGAATCTGCCTACTAATCTGGATCTGGGTTCTTCACACCTACCTTACCTCCTGTCCCGCCCACCCCAG----CTGCCCACGGTGCCCATGTTGCCCTCCATCTGAGGGAG-CTTCCTCTGGATGCTCCAT-GCCTCCCCAACCAAAACAGGCCCTTCCAAGCTAATGACCCAAAGACATCTTA--CAGATATGAA----GCTGGATACACAGAGAAGCCACATCAAGCATATAGTCAGTACTTAATAAGGGTC-------------------------TGAATTAATGAATGCTAGACCACAGGAGGTGG---GTCGTGTCACAGACAAAAGAGATTAATTGATTGAATGACTGA---GAGACCAGAGGTGGAGGTCTCCTTGACCTCTAGCACAGAT--CAGCCTAG--CTCCTCACCTGTCTTC---------ACCCCAGGGCTCAGCCACAGCAGGAGGAGAAGCAGCAGCCACATGGCAGCAGGCA-CGAGCGGAGAGAGCAGTGTTTTGG-GTCCAAGGCCCAGTCTTTAAATATCTGCCCATCCCAGCCAACCCATCTGGTTCCTCCCCAGCT---GGGAGGAACCAG--CTAACACCTGGGCAGTCGCT----GACAGCA-------GG----------------AGTGACGCAGGTATCCCAGCTGCTTGGAATAGCTCACTTAAGCAGGGATAA----------------------------TTTTCACGTCCTGGAAACTCCAGTCTCCCGGGGAAGAATCTGAAAAATCAGAGTGACAGA------- i calJac3.chr17 C 0 C 0 s mm10.chr16 32809948 743 + 98207768 CCTGCTGTACTTCCAGGTATATTTTTAGCCATCCTGATCAACTAGTGGGTGGCGGCTG-ATGGACCAGGCTG-CTGTTCATCTGGACCTGGGCTTTTTACGCTCACCATCCCTCCTAATCCCTCATGCCT------CCTCCAAAAGTGTACACACCA--------------GAA-CCACCTCTGAAGACTCCACAGCCTTCCCAAGC-----AGGC---TCCAAGCT--TGCTGCAGAGACAGCT-------------G----TGTGGACACACCCAGAAGCCACACCAAGCACAT--TTAGGATACAAGTGATGTCTGAGTAAGTGGGTTACCTGATCAGATCAGTGAGTGGGTTCTAGCCATCAGAAGGTGGCGTATCTGACCAGAAATAAATAAT----ATTGATTGACTAAATGAAATGAGAACAAACAC-AGGGTCTCTTTGACCTCTCAAATAGGGGTCAGCTCAGTTCTCCTCACCTGCCTTCTGGTTTGGAATCACAGGGCCCAGCCACAGCAGGAGGAGAAAGGCAAACCACATGGCTTCAGGC--TCAATAGATGCAGAAGTGCTTCAGGGATCAAGGTCCAG--CTCCAATAGCTACTCACTGGAGAGCACTTGTCCAGTGTCTCCACA---CAGAGGAGGAGCCAG--GTGACACCTGGTGATTGGCAAGGGGGTGGCACCGTGGCTG----------------TGTGGCACAGGTGTTTCAGCTGCTGGGATTGACTTAGCCAAACAGAGGTAA----------------------------TTTTTATATCTTTTTATACCCACGCTCT--GGGAagaatctgaaatgccaaagtggcaga------- i mm10.chr16 I 1273 N 0 s canFam3.chr33 2346276 777 - 31377067 cccatcacatttcccgg-ata-ttatagcAAAACAAATGGGTT-GTGCCTGGCAGTCA-CCCCTTGAG------------TCTGGGTCTAGACTTGTCACAGC-ACCTTCCCTCCTGCCTC-CCCGCCTCAGTGCACATTCTAGAACTCCC-TGCTG-CCTCTACTGGCAGGAA-TCTCTTTGGGACACTCCACTGACTCCC----------CAACCTTCCCAAGCTAATCAGCCAAGGACATCTTA--GGAATATGAAGGTGGTTGGATTCACAGAGAAGCCACATTAAA------------GCACAGGAAGGTTCCGAGGAAATGAATTATTGGATTA-ATGAATTAGTGAACATTAGCCCCTAGGAGGCAA---ATCATGCCAGGAACACAaatg----actgaatgaataaatga---atgaaAGGGACTAGAGGTCTCTTTGACCTGCTAGACAG-----------G--CTCCTCACCTGTCTCCTGGTTTGGGGCCACGGGGCTCAACCACAGCAGGAGGAGAA---CCAGACACATGGTTGCAGGCACTGAGCAGAGACAG-AGTGTTTCAAGGACCAAGGCCAAGTCTTT-AATACTCACCCATCCCAGGAAGCTCGTTTGGTATCTGC--ATCCCTGGGGAGGTGCGAAGCTCAACACCTGGGCAGCCACTGGCAGAAGGCA-------GGGGTGTGGCACCAAGACAGTGGCACAGGTGTCCCGGCTGCTTGGAATAGCCTGTCCAAGCAGAGGTAATAGAGGaaaaaaatatatatatatattttCCCCATCTCCTGGGGCTTCCAGA--CCTGTGGGAGGAGCAGAGAAGCTAgaatcagagaaaccaga i canFam3.chr33 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=30328.000000 s hg38.chr3_KI270937v1_alt 93752 39 + 165607 ATGACAGCGCTCACAGGAACTTTGCAGATTATCTAATCt s panTro4.chr3_GL389630_random 69582 39 - 103936 atgacagcgctcacaggaactttgcagattatctaatct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2420634 39 - 202140232 gtgacagagctcgcaggaactttgcagattatctaatct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2880501 39 - 123690457 atgacagagcttgcaggaactttgcagattatctaatct i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890918 32 + 74750902 GCCACGTAGCTCA-AGGAACTTTGGAGATTATC------ i calJac3.chr17 C 0 C 0 s canFam3.chr33 2347053 39 - 31377067 atgatactgctgtcagggattttggtgatcatccaatct i canFam3.chr33 C 0 N 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=115640.000000 s hg38.chr3_KI270937v1_alt 93791 150 + 165607 ttttatt--tattttattttattttttgagacagagtctcactctatcgcccaggctggagtgcagtggtacgatctcagctcactgcaacctctgcctcccgggttcaagaggttcttctgcttcagcctccccagtagctgggattacag s panTro4.chr3_GL389630_random 69621 150 - 103936 ttttatt--tattttattttattttttgagacagagtctcactctatcgcccaggctggagtgcagtggtatgatctcagctcactgcaacctctgcctcctgggttcaagaggttcttctgcttcagcctccccagtggctgggattacag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2420673 141 - 202140232 tttta-------tttattttattttttgagacagagtctcactct----cccaggctggagtgcagtggtacaatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctccccagtagctgggattatgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2880540 152 - 123690457 ttttatttatattttattttattttttgagacagagtctcactctatcgcccaggctggagtgcagtggtatgatctcagctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcctcaccagtagctgggattacag i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73890950 139 + 74750902 -------------ttttttttttttttgagacagagtcttgctctgtcacccaggctggaatgcagtggtatgatctcagctcactgcaacctctgccttctgggttcaagggattgtcctgcctcagcctccccagtagctgggattacag i calJac3.chr17 C 0 I 3886 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=576674.000000 s hg38.chr3_KI270937v1_alt 93941 1199 + 165607 gtggctactattacacccagctaattgctgtatttttagtagagacgagttttcaccacgttggccaggctggtctcaaactcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacacctggccAATTGACTTTtattagcattcatatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaattactgcatcatatagtagttgcacattcagtcat---aaaaaaaaaca------gccaagctgtttcccagagtggctgcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgacaatagtattgttactattttttattttggtgattct-tttttttttttttttttttgagacataatcttgctctgtcgcccaggctggagcgcagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggccaggttggtcttgaattcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccatgcctggccttattttgttgattctaacacgtggtgatatctcctggtttaaagaagcgtttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctgtatatcttctccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCC----------------TTTGCAAATATagtcatgcatcgcataaggacattttggtcaatgacaaactgcatataggatgcggtcccataagattataataatgggcctgaaaaaattcctgttgccgagtgcaatgctactcatgtgtctagtgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacagcgcacaccattctgtacagtacacaatacttgataatgataataaatgtgttcctggatagcacagcacacaccattctgtacaatacacaatacgtgataat s panTro4.chr3_GL389630_random 69771 1189 - 103936 gtggctactattacacccagctaattgctgtatttttagtagagacgagttttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatccactgcctcagcctcccaaagtgctgggattacaggcatgagccaccacgcctggccAATTGACTTTtattagcattcatatacaggttttgtgtgaatatatgttttcatttctccgggataaatgtgcaaaaatgaaattactgcatcatatagtagttgcacgttcagtcat----aaaaaaaaca------gccaagctgtttcccagagtggctgcaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttgacaatagtattgttactattttttattgtggtgattc---------ttttttttttttgagacataatcttgctctgtcgcccaggctggagcacagtggcatgatctcagcttactgcaacctccgtctcctgggtttaagcaattatcttgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccacacctggctaatttttgtgttttcagcagagacagggttttgccatgttggccaggttggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaggtgtgagccaccgtgcctggccttattttgttgattctaacacgtggtgatatttcctggtttaaagaagcgtttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctatatatcttttccagtgaaatgttgctttgtatcttttgctcatgttctaattgcattctttgttttgttactattttaagacttttaaatgtattctagatactagTCC----------------TTTGCAAATATagtcatgcattgcataaggacattttggtcaatgacaaactgcatataggatggggtcccataagattataataatgggcctg-aaaaattcctgttgccgagtgcaatgctactcatatgtctagtgatgctcgtgtaaagctactgtgctgccacttgcataaaagcacagcgcacaccattctgtacagtacacaatacttgataatgataataaatgtgttactggATagcacagcgcacaccattctgtacagcacacaatacttgataat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2420814 1220 - 202140232 gcacctactactacacccagctaattgctatatttttagtagagatgggttttcaccgtgttgaccaggctggtctcaaactcctgacctcaggtgatccactgcctcagcctcccaaaatgctgggattacaggcatgagccaccatgcctggccAATTGACTTTtattagcattcatatacaggttttgtgtgaatatatgttttcatttctctgggacaaatgcacaaaaatgaaattactgcatcatatagtagttgcatgttcagtgattaaaaaaaaaaacaaaaactgccaaactgtttcccagagtggctacaccactttaaattctcacagcagtgattgagtggtacagttcctttgcatccttaccaatagtattgttactattttttattttggtgattctctttttttttttttttttttgagacataatcttgctctctcgcccaggctggagtgcagtggcacaatctcggctcactgcaacctccatctcctgggtttaagcaattatcctgcctcagcctcccaaggtgctaggactacaggcgtgtgccaccactcctggctaatttttg---tttcagcagagacagggtttcaccatgttggccaggctggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacaagcgtgagccactgtgcctggccttattttgttgattctaacacatggtgggatctcctggtttaaaggggtgtttccctaacggtatcaaacatcttttcatgtgcttatttgcaatctgtatatcttttccagtgaaatgttgctttatatcttttgctcatgttctaattgcattctttgttttgttactg-tttaagacttttaaatgtatactagatactagtcctttgttggatgtgtggtttgcaaatacagtcatgtgttccacaaggacatttgggtcaatgacaaactgcatataggatagggtcccctaagattataataatgggcctg-aaaaattcctgttgccgagtgcaatgctactcatgtgtctagtgatgctcgtgtaaagctactgtgctgccgcttgcataaaagcacagcacataccattctgtacagtacacaatacttgaaaatgataataaatgtgttactggaaagcagagcacacaccattctgtacagtacacaatacttgataat i ponAbe2.chr3 C 0 I 2095 s nomLeu3.chr11 2880692 1134 - 123690457 gcacctactactacacccagctaattgctgtatttttagtagagatgggttttcaccgtgttgaccaggctggtcccagactcctgacctcaagtgatccacagcctcagcctctcaaagtgctgggattacaggcatgagccaccacacctggccAATTaacttttattagcattcatatacaggttttgtgggaatatatgttttcatttccttgggataaacgtgcaaaaatgaaattactgcatcatatagtagttgcatcttcagtcat---taaaaaaaact------gccaaactgtttcccagagtggctgcaccactgtaaattctcacagcagtgactgaatggtacagttcctttgcatccttgccaacagtattgttactattttttattttggtgattc--------------cttttttgagaaataatcttgctctgttgcccaggctggagtgcagtggcacgatctcagctcactgcaacctctgtctcctgggtttaagcaattctcctgcctcagcctctcaaggtgctaggactacaggcatgtgccaccacgcctggctaatttttgtgtttttagcagagatagggttttgccatgttggccaggctggtcttgaactcctgatctcatgtgatctgcctgccccagcctcccaaagtgttgggattacagacatgagccaccgtgcccggccttattttgttgattctaacacatggtgggatctcctggtttaaaggggcatttccctaatggtatcaaacatcttttcatgtgcttatttgcaatctgtgtaacttttccagtgaaatgttgctttgtatcttttgctcatgttctaattggattctttgttttgttactg-tttaagacttttaaatgtattctagatactagtcctttgctggatgtgtggtttgcaaat--agtcatgcgttgcataaggacatttgggtcaatgacacactgtatataggatggggtcccataagattatagtaaggggcctg-aaaaattcctgttgccgagtgcaatgctactcatgtgtctagtgatgctcatgtaaagctactgtgctgccacttgcataaaagcacagcacacaccattctgtacagcacataatacttgataataa---------------------------------------------------------------- i nomLeu3.chr11 C 0 C 0 e calJac3.chr17 73891089 3886 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=1350.000000 s hg38.chr3_KI270937v1_alt 95140 16 + 165607 gataataaatgtgttc s panTro4.chr3_GL389630_random 70960 16 - 103936 gataataaatgtgttc i panTro4.chr3_GL389630_random C 0 I 723 s nomLeu3.chr11 2881826 5 - 123690457 -----------tgtta i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2422034 2095 - 202140232 I e calJac3.chr17 73891089 3886 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=101588.000000 s hg38.chr3_KI270937v1_alt 95156 382 + 165607 ctggtttatgtatttactataatatactattgatcagtgttttagagtgtactccttctctctataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaagttacagtaagctaaggctgacttattgaaaaaatgtgcttatacatgtaatatagctaagCTGGCTTTT s panTro4.chr3_GL389630_random 71699 382 - 103936 ctggtttatgtatttactatactgtactattgatcagtgttttagagtgtactccttctaactataaaagaattaagtgaactagcaggccctttgggaagtactgtagaaggcattgttaccacaggcgatgacagctccatgtgtgttattgcccctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtggatctaggctaacatgtgtttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaaGTTACAGTAAGCTAAGGCTGACTTATTGAAAAAATGTGCTTATACATGTAATATAGCTAAGTTGGCTTTT i panTro4.chr3_GL389630_random I 723 C 0 s nomLeu3.chr11 2881831 380 - 123690457 ctggtttaagtatttactatactgtactattgaccagtgttttagagtgtactccttctatctataaaagaattaagtgaactaacaggccctttgggaagtactgtagaaggcactgttaccacaggcgatgacagctccatgtgtgttactgctcctgaagaccttccagagagacaaaatgtggaggtggaagacagtgatactgatgaccctgaccctgtgtagatctaggctaac--gtgcttttgtgtcttagttttcaacaaaaaagtttaaaaagttaaaatactaagtttataaagttaaaaagttacagtaagctaaggttgacttattgaaaaaaTGTGCTTATACATGTAATACAGCTAAGTCTGCTTTT i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2422034 2095 - 202140232 I e calJac3.chr17 73891089 3886 + 74750902 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=36440.000000 s hg38.chr3_KI270937v1_alt 95538 93 + 165607 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAGCAT-GGCAAGGGGGACTCCAtcaggttggtgc s panTro4.chr3_GL389630_random 72081 93 - 103936 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTTCACAGAG-AGAAACAT-GGCAGGGGGGACTCCAtcaggttggtgc i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2882211 91 - 123690457 GCAAACATAGAGTCCTGTGGATGTT---ATGCTGACTTCGGCTTGGGGTTTTT--CAGAG-AGAAGCAC-AGGAGGGGGGATTCCAtcaggttggtgc i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73894975 96 + 74750902 GCAAAC--AGAGTGCTGTGGAGGTTATCATGCTGACTTTATCTTTGGGTTTTTCACAGAGTAGATGCACAGGCAGGGGTGATTCTGttaggttggtac i calJac3.chr17 I 3886 I 312 e ponAbe2.chr3 2422034 2095 - 202140232 I e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=74942.000000 s hg38.chr3_KI270937v1_alt 95631 111 + 165607 aaaggtaattgctgttttcgcaattaaaa-taatgggaaaaactgcaattacctttgcacccacctaaTAACTTATCTAGGGGACTCTTTCTCCACCCAAAACCCAGGACAC s panTro4.chr3_GL389630_random 72174 111 - 103936 aaagataattgctgtttttgcaattaaaa-taatgggaaaaactgcgattacctttgcatccacctaaTAACTTATCTAGGGGACTCTTTCTCCACCCAAAACCCAGGACAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424129 111 - 202140232 AAAGGTAATAGGTGTTTTCGCACTTAACA-TAATGGGTAAGACCCCGATTACCTTAGCACCCGCCTAATAACTTATCTATGGGAGCCTTTCTGCTCCCAAAGCCCAGGACAC i ponAbe2.chr3 I 2095 C 0 s nomLeu3.chr11 2882302 111 - 123690457 aaaggtaattgctgtttctgcaattaaaa-taatgggaaaaactgcgattacctttgcacccacctaaTAACTTATCTAGGGGACTCTTTCTCCACCCAAAGCCTAGGACAC i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895383 108 + 74750902 aaaggtagtttctgtttttgcaattaaaatttatggcaaaaattgcaattacccttatgccaacctaaTAATTTACCTAGAGGACTCTCTC----CACAAAGCCCAGGACAC i calJac3.chr17 I 312 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=3793.000000 s hg38.chr3_KI270937v1_alt 95742 10 + 165607 TTGGCCCACA s panTro4.chr3_GL389630_random 72285 10 - 103936 TTGGCCCACA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424240 9 - 202140232 TTGGCCCAC- i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895491 10 + 74750902 TTGGCCCACT i calJac3.chr17 C 0 T 19 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=191.000000 s hg38.chr3_KI270937v1_alt 95752 2 + 165607 AC s panTro4.chr3_GL389630_random 72295 2 - 103936 AC i panTro4.chr3_GL389630_random C 0 I 3 e ponAbe2.chr3 2424249 0 - 202140232 C e calJac3.chr17 73895501 19 + 74750902 T e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=0.000000 s hg38.chr3_KI270937v1_alt 95754 3 + 165607 TAC e ponAbe2.chr3 2424249 0 - 202140232 C e calJac3.chr17 73895501 19 + 74750902 T e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C e panTro4.chr3_GL389630_random 72297 3 - 103936 I a score=1637.000000 s hg38.chr3_KI270937v1_alt 95757 17 + 165607 ATCACCACCCCAGGGTT s panTro4.chr3_GL389630_random 72300 17 - 103936 ATCACCACCCCAGGGTT i panTro4.chr3_GL389630_random I 3 C 0 e ponAbe2.chr3 2424249 0 - 202140232 C e calJac3.chr17 73895501 19 + 74750902 T e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=14144.000000 s hg38.chr3_KI270937v1_alt 95774 41 + 165607 CCAGGACACTTGGCCCATGACTACATCACCACCCCAGGGTT s panTro4.chr3_GL389630_random 72317 41 - 103936 CCAGGACACTTGGCCCATGACTACATCACCACCCCAGGGTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424249 23 - 202140232 ------------------GATTACTTCACCACCCCAGGGTT i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895482 41 + 74750902 CCAGGACACTTGGCCCACTACTATATTACCACCCCAGGGTT i calJac3.chr17 T 19 T 41 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=600.000000 s hg38.chr3_KI270937v1_alt 95815 1 + 165607 C s panTro4.chr3_GL389630_random 72358 1 - 103936 C i panTro4.chr3_GL389630_random C 0 T 62 s ponAbe2.chr3 2424272 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895482 1 + 74750902 C i calJac3.chr17 T 41 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=5243.000000 s hg38.chr3_KI270937v1_alt 95816 20 + 165607 CAGGACACTTGGCCCACAAC s ponAbe2.chr3 2424273 20 - 202140232 CAGGACACTTGGCCCACGAC i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895483 20 + 74750902 CAGGACACTTGGCCCACTAC i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C e panTro4.chr3_GL389630_random 72359 62 - 103936 T a score=10686.000000 s hg38.chr3_KI270937v1_alt 95836 21 + 165607 TACATCACCACCCCAGGGTTC s panTro4.chr3_GL389630_random 72297 21 - 103936 TACATCACCACCCCAGGGTTC i panTro4.chr3_GL389630_random T 62 C 0 s ponAbe2.chr3 2424293 21 - 202140232 TACAACACCACCCCAGGGTTC i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895503 21 + 74750902 TATATTACCACCCCAGGGTTC i calJac3.chr17 C 0 T 23 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=5211.000000 s hg38.chr3_KI270937v1_alt 95857 18 + 165607 CAGGACACTTGGCCCATG s panTro4.chr3_GL389630_random 72318 18 - 103936 CAGGACACTTGGCCCATG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424314 18 - 202140232 CAGGACACTTGGCCCATG i ponAbe2.chr3 C 0 C 0 e calJac3.chr17 73895524 23 + 74750902 T e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=2895.000000 s hg38.chr3_KI270937v1_alt 95875 7 + 165607 ACTACAT s panTro4.chr3_GL389630_random 72336 7 - 103936 ACTACAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424332 7 - 202140232 AATACAT i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73895501 7 + 74750902 ACTATAT i calJac3.chr17 T 23 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I e nomLeu3.chr11 2882413 0 - 123690457 C a score=436256.000000 s hg38.chr3_KI270937v1_alt 95882 567 + 165607 CACCACCCCAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGTGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTCATCTAAAGCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCTTA-CAgtggg-taggattactcccttttttgttgtcattaaggaaacctgtaagaggaaaaacaaacacactttatgtggagagacagggaaagttgttctattcagtctggaatcta-gtccctcagcTGGTGGTCCACCTTCGGATTCACTggtcttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctggtgcctcctgagggtggaactgaggagaggagacgtgagagaggatgctggaaaggaggaagcagccagaatgtgtagggcctttgtggccaggccaaggagcctcagggaatatctgagc-gtcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtaggcaatgagttgtcattgtt-agatagaggataaaat s panTro4.chr3_GL389630_random 72343 567 - 103936 CACCACCCCAGGGTTCTTTACTATAGTTTTCTTGTTCTTCCTTCAATTACGTGCGACATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCTTTATCTAAACCAGGCTGTCATGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTCTTA-CAgtagg-taggattactcccttttttgttgtcgttaaggaaacctgtaagaggaaaaacaaacacactttatgtggagagacagggaaagttgttctattcagtctggaatcta-gtccctcagcTGGTGGTCCACCTTCGGATTCACTggtcttgggagtaagacggtgccttgtagtcaaagaagtgaggaattctagtacctcctgagggtggaattgaggagaggagacgtgagagaggaagctggaaaggaggaagcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-gtcttaaataggtcagagggcaattctg-----------------aaaacaaactccttctacctgctgtgtagacaatgagttgtcattgtt-agatagaggataaaat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424339 568 - 202140232 CACCACCTCAGGGTTCTTTCCTAAAGTTTTCTTGTTCTTCCTTCAATTACGTGCGACATTCCCAACGCCAAGATTCTTCCATTCCTTCTCTCCCCCTTTATCTAAACCAGGCTGTCGTGAGTTTCTGTCAGCTGCA--ATCAAGAGTCATGACTTTTA-CAGTAGG-TAGGATTACTCCCTTTTTTGTTGTCATTAAGGAAATCTGTAAGAAGAAAAACAACCGCACTTCATGTGGAAAGACAGGAAAAGTTGTTCTATTCAGTCTGGAATCTA-GTCCCTCAGCTGGCGGGCCACCTTCGGATTCACTggtcttgggagtaagacagtgccttgtagtcaaagaagtgaggacttctagtacctcctgagggtggaattgaggagaggagacatgagagaggatgctggaaaggaggatgcagccagaatgcgtagggcctttatggccatgccaaggaccctcagggaatatctgagc-gtcttaaataggtcagatggcaattctg-----------------aaaacaaattccttctacctgctgtgtagacaatgagttgtcactggtaagataggggataaaat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2882413 566 - 123690457 CACCACCCCAGGGTTCTTTCCTACAGTTTTCTTGTTCTTCCTTCAATTATGTGTGATATTCCCAACTCCAAGATTCTTCCAGTCCTTCTCTCCCCCtttatctaaaccaggctgtcatgggtttctgtcagctgca--atcaagagtcatgactCtga-cagtagg-taggattactcccttttttgttgtcgttaaggaaatctgtaagaggaaaaacaaacgcacttcatgtggagagacagggaaagttgttctattcaatctggaatcta-gtccctcagctggcgggcCACCTTCGGATTCACTggtcttgggagtaaga--gtgcctcgtagtcaaagaagtgaggaattttagtagctcctgagggtggaactgaggagaggagacgtgagagaggatgctggaaaggaggatgcagccagaatgtgtagggcctttgtggccatgccaaggagcctcagggaatatctgagc-atcttaaataggtcagatggcaattctg-----------------aaaacaaattccttctacctgctgtgtagacaatgagttgtctttggtaagataggggataaaac i nomLeu3.chr11 C 0 C 0 s calJac3.chr17 73895508 589 + 74750902 TACCACCCCAGGGTTCTTTCCTATAGTTTTCTTGTTCGTCCTTCAATTATGTGCAATATTCCCAACGCAAAGATTCTTCCAAT-ATCCTCTCCCCCTTTATCTAAACCAGATTGTCATGAGTTTCCGTCAGCTGCATCAAAAAGAGTCACGACTCTTACCAGCAGGTTAATTTTACTACCTTTTTTGTTGTTTTTAAGGAAACCTTTAAGAGGAAAAACAAATGCACCTCATGTGGAGAGACAGGAAAAGTTGTTATATTGAGTCTAAAATCTAGGTCCCTGAGCTAGAAGG-CACCCTCGGATTCAGTggtcttggaagtaagacagtgcctggtaatcaagaaggtaagaaattctagtatctcctgagggaagaattgaggagaagagaagtgagggaggacagtggaaaggaagatggggccagaatgtgtagggcctttttggccatgccaaggagcatcagggaatatctgagcagtcttaaatagatcaaacggcaattctgaaaaaaaaaaaaaaaaaaaaaaaaaatccttctatccagggtgtagagaatgagttgtaattggcaagataggggacataat i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91387209 2237 + 91754291 I e papAnu2.chr2 187361143 2538 + 187378091 I e macFas5.chr2 192442152 2558 - 192460366 I e rheMac3.chr2 192589737 2564 + 192599291 I a score=1954673.000000 s hg38.chr3_KI270937v1_alt 96449 694 + 165607 gaacccaattagattattgccatcattccagtgattgaagatgttgatctgtaatagggtaatggccatacactttcgagaggaaaaatgttcaaatttaggggataattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaacggagag-----------ggggagagagagagaaggtgg--acagtcaccgacatatgaggcagtggaagaggaacaggcatggataggaagagaatt--gtgggacacactgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtagtatattgaccaagcaagtctgtcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggtaacctgagccgtgagagaagctaaaatccccggggagaggatgtagaatgagaggagaaaatgggccagg----acaaacacaaggaa------------------------------------tgctcggagggaggggcaaaaccagaacagtacagcgtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggctgactcagggatcctctttggcagaagtagttccaatgaagtgggaggaggaagggaggagcagaggccaaatgagc s panTro4.chr3_GL389630_random 72910 722 - 103936 gaacccaattagattactgccatcattcgagtgatagaagatgttgatctgtaatagggtaatggccatacactttcgaggggaaaaatgttcaaatttagggggtaattagaaatctgcacttacagcccttggtgacacttttcctatgagccaaatggagag-----------ggggagagagagagaaggtgg--acagtcaccgacgtatgaggcagtggaagaggaacaggcatg------aagagaattatgtgggacacattgggttcgagatgcctgtgtgagacagtctcatgaatatgtccagtaatatattgaccaatcaagtctgtcaggagcctctggaaatgaggtacagaatttgatagtcatcactatggagatggtaacctgagccgtgagagaagctaaaatccccggggagaggatgtagaatgagaggagaaaatgggccagg----acaaacacaaggaaccccgaca-taaagggctgaaca---caggagggggtgctcagagggaggggcaaaaccagaacagtacagcgtccccaaaccaaggaaaagaatgttgccagaagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggatgactcagggatcctctttggcagaagtagttccaatgaagtgggaggaggaaggtagaagcagaggccaagtgagc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2424907 726 - 202140232 gaacccaattagattattgccatcatttgagtgatagaagatgttgatctgtaatagggtaatggccataccctttagaggggaaaaatgttcaaatttaggggataattagaaatctgcacttccagcccttggtgacacttttcctatgagccaaatggagag-----------ggggagagagagagaaggtgg--acagtcaccgacatatgaggcagtggaagaggaacaggcatggacaggaagagaattatgtgggacaccttgggttcgagatgcctgtgtgagtcagtctcatgaatatgtccagtaatgtattgagcaagcaagtctgtcaggagcctccggaaatgaggtacagaatttggtagtcatcactatggagctggtaacccgagtcatgagagaagctaaaatccccggggagaggatgtagaatgagaggagaaaatgggccagg----acaaacacaaggaatgccgaca-taaagggctgaaca---gaggagggggtgctcagagggaggggcagaaccagaacagtacagcatccccaaaccaaggaaaagaatgttgccaggagaggagagtcaggctgtttcaaactctgctaagaagtgaaggatgttgcatattgagtagagtccattggggttaccagtcaggatgtctca--gatcctctttggcagaagcagttccaatgaagtgggaggaggaaggcaggggcaaaggtcgagtgagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2882979 722 - 123690457 gaacccaattagattattgccatcattcgagtgatagaagatgttgatctgtaatagggtaatggccatacactttagaggggaaaaatgttcaaatttaggggataattagaaatctgcacttacagcccgtggtgacacttttcctatgagccaaacagagag-----------ggggagagagagagaaggtgg--acagtcaccgacgtatgaggcagtggaagaggaacagg-atggacaggaagagaattatgtgggacacattgggttcgacacgcctgtgtga--cagtctcatgaatatgtctagtaatatattgagcaagcaagtctgtcaggagcctccggaaatgaggtacagaatttgatagtcatcactgtggagatggtaccccgagccatgagagaagctaaaatccccgggcagaggatgtagaac--gaggagaaaatgggccagg----acaaacacaaggaatgccgaca-taaagggctgaaca---gaggagggggtgctcagagggaggggcaaaaccagaacagta-agcatccccgcaccaaggaaaagaatgttgccagaagaggagagtCAGGCTGTTTCAAACTCTGCTAAGAAGTGAAGGACGTTGCATATCGAGTAGAGTCCACTGGGGTTACCAGTCAGGATGTTTCAGGGATCCTCTTTGGCAGAAGTAGTTCCAATGAAGTGGGAGGAGGAAGGTAGGAGCAAAGGCCAAGTGAGC i nomLeu3.chr11 C 0 I 10 s rheMac3.chr2 192592301 720 + 192599291 gaacccagttagattattgcagtcattcgagtgatagaatatgttgatctgtaatagggtaatggtcatacactttagaggggaaaaatgttcaaacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctatgagccaaatgtagag-----------gtggagagagagagaaggtgg--acagccactgacgtaggaggcagtggaagaggaacaggcacggacaggacgagaattacctgggacacactgggtttgagaggcctgtgtgagacagtctcatgaatgtgtccaataacgtattgaccaggcgagtccgtcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcggagctggtgacccgagccatgagaggagctaaagtccccggg--gaggatgtagaacgagaggagaaaatgggccagg----acagacacaagcaatgccgaca-taaagggctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtacag--tccccaaaccaaggaaaagattgtcgccggaagaggagggtcaggctgtttcaaact---ctaagaagtgaaggacgtggcgtgttgagtagagtccactggggttaccagtcaggacgtctcagggatcctctttggcacaagtagttcccgtgaagtgggaggacgaaggtaggagcagaggccaagggagt i rheMac3.chr2 I 2564 C 0 s macFas5.chr2 192444710 720 - 192460366 gaacccagttagattattgcagtcattcgagtgatagaagatgttgatctgtaatagggtaatggtcatacactttagaggggaaaaatgttcaaacttaggggataatgagaaatctgcacccacagcccttggtgacacttttcctatgagccaaatgtagag-----------gtggagagagagagaaggcgg--acagccactgacgtaggaggcagtggaagaggaacaggcacggacaggaagagaattacctgggacacactgggtttgagaggcctgtgtgagacagtctcatgaatgtgtccagtaacgtattgaccaggcgagtccgtcaggagcctcgggaaatgaggtacagaatttggttgtcatcactgcggagctggtgacccgagccatgagaggagctaaagtccccggg--gaggatgtagaacgagaggagaaaatgggccagg----acagacacaagcaatgccgaca-taaagggctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtacag--tccccaaaccaaggaaaagattgtcgccggaagaggagggtcaggctgtttcaaact---ctaagaagtgaaggacgtggcgtgttgagtagagtccactggggttaccagtcaggacgtctcagggatcctctttggcacaagtagttcccgtgaagtgggaggaggaaggtaggagcagaggccaagggagt i macFas5.chr2 I 2558 C 0 s papAnu2.chr2 187363681 723 + 187378091 GAACCCAGTTAGATTATTGCCGTCATTCGAGTGATAGAAGATGTTGATCTGTAATAGGGTAATGGCCATACACTTTAGAGGGGGAAAATGTTCACACTTAGGGGATAATGAGAAATCTGCACCCACAGCCCTTGGTGACACTTTTCCTATGAGCCAAatatagag-----------agggagagagagagaaggcgg--ACAGCCACTGACGTAGGAGGCAGTGGAAGAGGAACAGGCACAGACAGGAAGAGAATTACCTGGGACACACTGGGTTTGAGAGGCCTGCGTGAGACAGTCTCATGAATATGTCCAGTAACGTATTGACCAGGCGAGTCCGTCAGGAGCCTCGGGAAATGAGGTACAGAATTTGGTTGTCATCACTGCGGAGCTGGTGACCTGAGCCATGAGAGGAGCTAAAGTCCCCGGG--GAGGATGTAGAACGAGAGGAGAAAATGGGCCAGG----ACAGACACAAGCAATGCGGACA-TAAAGGGCTGAACA---GAGGAGGGGGCGCTCAGAGGGA-GGGCAGAACCAGAGATGTACAG--TCCCCAAACCAAGGAAAAGATTGTCACCGGAAGAGGAGGGTCAGGCTGTTTCAAACTCTGCTAAGAAGCGAAGGACGTGGTGTGTTCAGTAGAGTCCATTGGGGTTACCAGTCAGGACGTCTCAGGGATCCTCTTTGGCAGAAGTGGTTCCCGTGAAGTGGGAGGAGGAAGGTAGGAGCAGAGGCCAAGGGAGC i papAnu2.chr2 I 2538 C 0 s chlSab2.chr15 91389446 723 + 91754291 gaacccagttagattattgccgtcattcgagtgatagaagatgttgatctgcactagggtaatggccatacactttagaggggaaaaatgttcaaacttaggggataATGATAAATCTGCACCCACAGCCCTTGGTGACACTTTTCCTATGAGCCAAATGTAGAG-------------GGGCAGAGAGAGAAGGCGG--ACAGCCACTGACGTatggggcagtggacgaggaacaggcacggacaggaagagaattatctgggacacactgggtttgacaggcctgtgtgagacagtctcgtgaatatgtccagtaacgtatcgaccaggcaagtctgtcaggagcctcgggaaatgaggtacagaatttggtagtcatcactgcggagctggtgacccgagccatgagaggagctaaagtccccggggagaggatgaagaatgagaggagaaaatgggccagg----acagacacaagcaatgccgaca-taaagggctgaaca---gaggagggggcgctcagaggga-gggcagaaccagagatgtacag--tccccaaaccaaggaaaagaatgtcgccggaagaggagggtcaggctgtttccaactctgctacgaagtgaaggacgtggcgtgttgagtagagtccattggggttaccagtcaggacgtctcagggatccactttggcagaagttgttccagtgaagtgggaggaggaaggtgggagcagaggcccagggagc i chlSab2.chr15 I 2237 C 0 s calJac3.chr17 73896097 730 + 74750902 gaacccaattagattattgccatcattcaagtgatggatgatgttgatctgtaatagggtaatgaccatacatttttg-gggggaaaatgtttaaatttaggggataattagaaatctgcacttacagcacttggtgatacttttcttatgagcaaaaaaaaaaaaaaaaaagccaggggggagagagagaaggtggatacagtcaccgacatatgaggcagtggaagaggaagaggcatggacaggaagagaattatttgggacacattgggttcgagatgcctgtgtgagacagtttcatgaatatgtccagta----------------agtctgacaggagcatc-ggaaatgaagtacagcatttggcagtgatcactatggagctggtaagcggagccttaagaggagctaacatccctggggagagtatgtagactgagaggaggaaatggcccaggacacacagacacaaggaatgccaacatttaagggctggacagaggaggaggggaagctcagagggaggggcgaaaccagaaaagtacagtgtcccggaatcaaggaaaagagtgtctcaagaagaggagagtca-gctgctccaaactctgctaagaagtgaaggaagttgcatatggagcagagcctgctggggttaccagtcctcatgctaccaggatcccctttggcagaagcagttccagtgaagtgggagtgggaaggtaggggcagaggccaagtgagc i calJac3.chr17 C 0 C 0 a score=1649793.000000 s hg38.chr3_KI270937v1_alt 97143 804 + 165607 gtgaggagtgtttaggagttgacagaaagtgtatccacttttttgagacgtttagccaggaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatgg-aaagcttgatcctg-tttaaatg--ctgttttatgcccctac------------gagggcgaggttaaacatacagaatagaggcataactgatagagccaagactcccacccaggagcgggtttcgagcggcacctctctaattcaatcccaaaggaaaagaggatacatgtgggtccaggtacatgctgaggtttggtggcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaataggggaagccctgtctgctggttgtgatgtgccgtgacagtcagaaatgc-ggggaaaaggggacaggtctgaaacgggaggcgttaagaatgggaaagtaaaggcaggcgcgatggctcacgcctgtaatcccagcactttgggagctcgaggcgggtggatcacctgaagtcgggcatttgagaccagcctggccaacatggtgtaaccccatctctactaaaaatacaaaaattagccaggcatggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgc-------------------ttgaacccaggaggtggagggtgcagtgagctgagatcgcgccg-------ctgcactccagact-gggtggcaaagcgagactccaactcaaa-----------------------aaaaaaaaaaaaa----aagaatgggaaagggagagtgtCTGGGGAAGCAGC s panTro4.chr3_GL389630_random 73632 802 - 103936 gtgaggagtgtttaggagttgacagaaagtgtatccacttttttgagacgtttagccacgaagagggagagacatggggcagtaggtggaggaggagatgaaattaagggagtgtatggagttttaaaatgg-aaagcttgatcctg-tttaaatg--ctgttttatgcccctac------------gagggtgaggttaaacatacagaatagaggcataactgatagagccaagacccccacccaggagcgggtttcgagcggcacctctctaattcaatcccaaaggaaaagaggatacatgtgggtccaggtacatgctgaggtttgggggcaggactttgaaggaggtcccatctgatggcttctatttctcctgtgaaataggggaagccctgtctgctggttgtgatgtgccgtgacagtcagaaatgc-ggggaaaaggggacaggtctgaaacgggaggcgttaagaatgggaaagtaagggcaggcaccatggctcacgcctgtaatcccagcactttgggagcccgaggcgggtggatcacctgaggttgggcatttgagaccagccaggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgc-------------------ttgaacccaggaggtggaggctgcagtgagctgagatcgcgccg-------ctgcactccagact-gggtggcaaagcgagactccatctcaaa-----------------------aaaaaaaaaaaaa------gaatgggaaagggagagtgtCTGGGGAAGCAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2425633 809 - 202140232 gtgaggagtgtttaggagttgactgaaagtgcatccacttttttgagaagtttagccacgaagaggaagagacatggggcagtaggtggaggaggaggtgaaattaagggagtgtatggagttttaaaatgg-aaagattgatcctg-tttaaacg--ctgttttatgcccctac------------gagggcgaggttaaacatacagaatagaggcataactgatggagccaagacgcccacccaggagcgggtttcgagcggcacctctctaattcaatcccaaaggaaaagaggatacacgtgggtccaggtccatgctgaggtttggtggcaggactttgaaggaggtcccatctgatggcttctatgtctcctgtgaaataggggcagccctgtctgctggttgtgatgtgttgtgacagttagaaatgcaggggaaaagcggacaggtctgaaatggtaggtgttaagaatgggaaagtgagggcaagcgcaatggctcactcctgtaatcccagcactttgggagcctgaggggggtggatcacctgaggttgggcatttgagactagcctggccaacatggtgaaatcccatctctactaaaaatacaaaaattagccaggcatggtggtgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatcgc-------------------ttgaatccaggaggtggagggtgcagtgagctgagatcatgcca-------ctgcactccagcct-gggtggcaaagagagacaccatctcaaa-----------------------agaaaaaaaaaaaaaaaaagaatgggaaagtgagagtgtctaggaaagcagc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192593021 839 + 192599291 gtgaggagcgtttaggagttgacagaaagtgtatccacttttttgagaagttcagccatgaagaggaagagacaggcggcagtaggtggagagggagatgaaattaagggagtgtg-ggagttttaaaatgg-gaagcttgatcctgttttaaacg--ctgttttatgcccctac------------aagggcgaggtgaaacatacagaatagaggcataactgatagagccaaga-ccccacccaggagcgggtttcaagcggcac----ctaattcaatcccgaaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--gggaagccctgtctgctggttgtgatgtgccgtgac----agaaatgc-ggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgaggccgggcacggtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggcagatcacctgaggttgggagtttgagaccagcctggctaacatggtgaaaccccatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcaggagaattgcgctgaggcaggagaattagttgaacccagctggtggaggttgcaatgagctgagatctcacca-------ctgcactccagcct-gggtggcagagcgagactccatctcaaaaaaaannnnnnnnnncccaaaaaaaaaaaaaaaaaaaaaaaagaatgggaaagtgAGAGCGTCTGGGGAAGCAGC i rheMac3.chr2 C 0 I 8 s macFas5.chr2 192445430 831 - 192460366 gtgaggagcgtttaggagttgacagaaagtgtatccacttttttgagaagttcagccatgaagaggaagagacaggcggcagtaggtggagagggagatgaaattaagggagcgtg-ggagttttaaaatgg-gaAGCTTGATCCTGTTTTAAACG--CTGTTTTATGCCCCTAC------------AAGGGCGAGGTGAAACATACAGAATAGAGGCATAACTGATAGAGCCAAGA-CCCCACCCAGGAGCGGGTTTCAAGCGGCAC----CTAATTCAATCCCgaaggaaaagaggaaacacgtgggtccagggacatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--gggaagccctgtctgctggttgtgatgtgccgtgac----agaaatgc-ggggaaaagggggcaggtctgaaacgggaggccttaagaatggggaagtgaggccgggcacagtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggcggatcacctgaggttgggagtttgagaccagcctggctaacatggtgaaaccccatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcaggagaattgcgctgaggcaggagaattagttgaacccagctggtggaggttgcaatgagctgagatctcacca-------ctgcactccagcct-gggtggcagagcgagactccatctcaaaaaaaaaaaaa--------aaaaaaaaaaaaaaaaaaaaaaaaGAATGGGAAAGTGAGAGCATCTGGGGAAGCAGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187364404 814 + 187378091 GTGAGGAGCATTTAGGAGTTGACAGAAAGTGTATCCACTTTTTTGAGAAGTTCAGCcatgaagaggaagagacaggcGGCAGTAGGTGGAGGGGGAGATGAAATTAAGGGAGTGTG-GGAGTTTTAAAATGG-GAAGCTTGATCCTGTTTTAAACGCTCTGTTTTATGCCCCTAC------------AAGGGCGAGGTGAAACATACAGAATAGAGGCATAACTGATAGAGCCTAGACCCCCACCCAGAAGCGGGTTTCAAGCGGCAC----CTAATTCAATCCcgaaggaaaagaggaaacacGTGGGTCCAAGGACATGCTGAGCTTTGGTGGCAGGAGTTTGAAGGAGGTCCCGTCTGATGGCTTCTATTTCTCCTGTGAAAC--GGGAAGCCCTGTCTGCTGGTTGTGATGTGCCGTGAC----AGAAATGC-GGGGAAAAGGGGGCAGGTCTGAAACGGGAGGCCTTAAGAATGGGGaagtgaggccgggcatggtggctcacgcctgtaatcccagcacttcggaagcccgaggcaggtggatcacctgaggttgggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaacctagccgggcatggtggtgtgtgcgcgtaatcccagctactt----------ggcaggagaatcgcgctgaggcaggagaattagttgaacccagcaggtggaggttgcaatgagctgagatctcacca-------ctgcactccagcctggggtggcAGAGCGAgtctctacctcaaa------------------aaaaaaaaaaaaaaaaaaaaaaaagaat-ggaaagtgaGAGCGTCTGGGGAAGCAGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91390169 817 + 91754291 gtgaggagcgtttaggagttgacagaaagtgtatccacttttttgagaagttcagtcatgaagaggaagaggcaggcggcagtaggtcg-gggggagatgaagttaagggagtgtgtggagttttaaaatgg-gaAGCTCGATCCTGTTTTAAACACTCTGTTTTATGCCCCTAC------------AAGGGCGAGGTTAAACATACAGAATAGAGGCATAACTGACAGAGCCAAGACCCCCACCTAGAAGCGGGTTTCAAGCGGCAC----CTAATTCAATCCCAGaggaaaagaggaaacacgtgggtccagggagatgctgagctttggtggcaggagtttgaaggaggtcccgtccgatggcttctatttctcctgtgaaac--gggaagtcctgtctgctggttgtgatgtgccataac----agaaatgc-agggaaaagggggcaggtctgaaatgggaggccttaagaatggggaagtgaggccgggcgcggtcgctcatgcctgtaatcccagcactttgggagcccgaggcgggtggatcacctgaggttgggcgtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaactagccgggcatggtggtgtgtgcgtgtaatcccagctacttgggaggctgaggcaggagaatcgcgcagaggcaggagaattagttgaacccagcaggtggaggctgcagtgagctgagatcgcacca-------ccgcactccagcct-gggtggcagagcgagactccatctcaaa-------------------------aaaaaaaaaaaaaaaaagaaTGGGAAAGTGAGAGTGTCCGGGGAAGCAGC i chlSab2.chr15 C 0 I 8 s calJac3.chr17 73896827 763 + 74750902 gtgaggagtgtttaggagttgacagaaagtgtatctgcttttgtgagaagtttagccatgaagaggaacagacatggggccgtaggtgcaggaggagatgaaattaagggaacgtatggagttttaaaatggaaaaaCTTGATCCTGTTTTAAATGCTCTGTTTTATGTCCCTGCTCCCTTTCCCTTGAGGGCGAGGTTAAATATGCAGAATGGAGACATAACTGATAGAGCCAAGACCCCCACCCAGGAGT-GGTTTCAACCAGCATCACTCTAATTCaatcac-aggaaaaaaaggatacatgtgggtccatgtac-cgctgaggtttggtggcaggactttgaaggtggtcccatccggtagcttctacttctcctgtgaaacatgggaggccctctgtgctggttgtgatgtgcagtgacagtcagggatgt-ggagagaaggggacaggtctgaaac------cgttaagaatgggaaag--Aggtcgagcggggtggctcgcatctgtaatcccagcgctttgggaggccgaggcaggtagatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatctcta-gaaaaatacaaaaattagtcaggcatgatggcgggtgtctgtaatcccagctattctgggggctgagggaggaaaatcgc-------------------ttgaactcgggaggcagaggctgcagtgaggtgagatcgcgccactgcactctgcactccaacct-gagcaacagagtgacactccgtct------------------------------------------------------------------------------- i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=10451.000000 s hg38.chr3_KI270937v1_alt 97947 49 + 165607 GTTGCCTCGGCAAGGCCTGAGACCGGCTGGGGTTAGAGATCAGGACTCC s panTro4.chr3_GL389630_random 74434 49 - 103936 GTTGCCTCGGCAAGGCCTGAGACCGGCTGCGGTTAGAGATCAGGACTCG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2426442 49 - 202140232 gttgcctcggcaaggcctgagaccagctggggttagagatcaggactcg i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192446261 8 - 192460366 -----------------------CAGTTAGG------------------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187365218 8 + 187378091 -----------------------CAGTTAGG------------------ i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73897590 46 + 74750902 --TGCCTCACCAAGGCCTGAGACCTGCTGGGGTTAGATGT-AGGACTTG i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91390986 8 + 91754291 I e rheMac3.chr2 192593860 8 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=2059302.000000 s hg38.chr3_KI270937v1_alt 97996 965 + 165607 CGCGTGGCCTCGTCTCTGCCTCTGTGCATTTTCCCCCAGCAGGTCAGCAGTGTGAAAGGC--GGGGGTTCTAGTAGGTCTCACAGGGAGACAATGCAGGAAGGGGCTGAGAATTGCAAGTGAGAGGTTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTAccctgccccagtccccagccctcagcccccgacccaCCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGGCC-AGATACCCAGGCAGTGGGATGTGCAGTGGGAGGGGTCTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCCGCCGCCGACCGGCC--CCCCCGCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAGTGGTGGAGCGTTAAGAGCTCGGTGGTAAACGTGCACTGAAATACAGTCAtgctgtgcagaagctctctagtttcattagataccttttgtcaattttggcttttgttgccatttcttttggtgttttagtcatgaa-gtctttgcccatgcttacgtcctcaatggtgttgcctaggttttcttctaggatttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttgtataag-tgtcagcaaggggtctagtttcggttttctgcatatgaccaggcagagtgaacaggcaacctacagaatggaagaaaatttttgcaatctatccatccgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaa-----caaacaaccccatcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaa-ctcatcgtcactgatcattagagaaatgcaaatcaaa s panTro4.chr3_GL389630_random 74483 969 - 103936 CGCGTGGCCTTGTCTGTGCCTCTGTGCATTTTCCCCCAGCAGGTCAGCAGTGTGAAAGGT--GGGGGTTCTAGTAGGTCTCACAGGGAGACAATGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGCACGGACTGAGCGATCGCCACCGAGAGATATTTGGGGTACCCTGCCCCAGTCCCCAGCCCCCAGCCCCCGACCCACCATGGGAGGTGGGAGCAGCGGGCAGGCCGGTTGGGGGCC-AGATACCCAGGCAGTGGGATGTGCAGTGGGAGGGGTCTCCGC-CCCTGCCCCGGGTC--CCCACTGGCCCCTCTGCCGCCCACTGGTC--CCCC-GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGACAGTGGTGGAGCGTTAAGAGCTCGGTGGTAAACGTGCACTGAAATACAGTCAtgctgtgcagaagctctctagtttcattagataccttttgtcaattttggcttttgttgccattccttttggtgttttagtcatgaaagtctttgcccatgcttatgtcctcaatggtattgcctaggttttcttctaggatttttctggttttaggtctcacgtttaaatctttaatgcatcttgagttaatttttatataaggtgtcagaaaggggtctagtttcggttttctgcatatgaccagccagagtgaacaggcaacctacagaatggaaaaaaatttttgcaatctatccatccaacaaagggctgatatccagaatttacaaggaacttaagtaaatttacaagaa-----caaacaaccccgtcagaaagtgtgcaaaggatatgaacagacacttctc-----aagacatttatgcagccaacaaac--atacgaaaaaaagctcatcgtcactgatcattagagaaatgcaaatcaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2426491 965 - 202140232 tgcgtggcctcgtctgtacctctgtgcattttcctccagcAGGTCAGTGGTGTGAAAGGT--GGGGGTTCTAGTAGGTCTCACAGGGAGACAATGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGTTATTGGTAGGATGGACAATGCAGGAGCTGGATGGACTGCAGGGACTGAGCGATCGCCACCGAGAGATATTTGGGGCACCCTGCCCCAGTCCCCAGCCCCCA-------ACCCACCATGGGAGGTGGGAGCAGCGGGCAAGCCGGTGGGGGGCC-AGATGACCAGGCAGTGGGATGTGTAGTGGGAGGGGTCTCCAC-CC--GTCCCAGGTC--CCCACTGGCCCCTCTGCCACCCACCAGCC--CCCC-GCAGCATCCCAGAGCCAACCCAGGCCCAACTAGAGGAATGGCTGCAGGGCTGGGATCCTAATGACACAGGACAGTGGTGGAGCATTAAGAGCTTGGTGGTAAACATGCATTGAAATACAGTCAtgctgtgcagaagctctttagtttaattagatcccttttgtcaattttggcttttgctaccattgcttttggtgttttagtcatgaa-gtctttgcccatgcttatgtcctggatggtattgcctaggttttcttctaggatttttctggttttgggtcttacgtttaaatctttaatccatcttgagttaatttttatataaggtgtcaggaaggggtctagtttcagttttctgcatatgactagccagagtgaacaggcaacctacagaatggaagaaaatttttgcaatctatccatccgacaaagggctaatatccagaatttacgaggaacttaagtaaatttacaagaag----aaaacaactccgtcagaaagtgggcgaaggatatgagcagacacttttcaaaagaagacatttatgcagccaaaagac--acatgaaaaaaagcacatcatcactgatcattacagaaatgcaaatcaaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192593868 955 + 192599291 CACGTGGCCTAGTCTGTGCCTC--TGCGTTTTCCTCCAGCTGGTCAGTGGTGTGAAAGGT-GGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTACCCTTCCCCAGTCCCCAGCCCCCG-------ACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCGGGGGGCC-AGGTGCCCAAGCAGTGGGATGTGCAGCGGGAGGGGTCTCTGC-CTTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGCC--CC---GTGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAGTGGTGGAGCATTAAGAGTTCGGTGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagtggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttccgcataagactagccagagtgaacaggt-acctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aaaacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactggtcattagagaaatgcaaatcaaa i rheMac3.chr2 I 8 M 585 s macFas5.chr2 192446269 955 - 192460366 CACGTGGCCTAGTCTGTGCCTC--TGCGTTTTCCTCCAGCTGGTCAGTGGTGTGAAAGGT-GGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTACCCTTCCCCAGTCCCCAGCCCCCG-------ACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCAGGGGGCC-AGGTGCCCAAGCAGTGGGATGTGCAGCGGGAGGGGTCTCTGC-CTTGGCCCCAGGGC--CCCACTGGCCCCTCCGCAGCCTACCGGCC--CC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAGTGGTGGAGCATTAAGAGTTCGGTGGTAAACATGCACTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagtggtattgcctaggttttcttctagggtttttctggttttaggtctaacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttccgcataagactagccagagtgaacaggt-acctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaagctcatcatcactgatcattagagaaacgcaaatcaca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187365226 956 + 187378091 CACGTGGCCTAGTCTGTGCCTC--TGCGTTTTCCTTCAGCTGGTCAGTGGTGTGAAAGGT-GGGGGGTTCCAGTAGGTCTCACAGGGAGACAAGGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGTTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTACCCTTCCCCAGTCCCCAGCCCCCG-------ACCCTCCGCGGGAGGCGGGAGCAGCGGGCGGGCCTGCGGGGGGCC-AGGTGCCCAAGCAGTGGGATGTGCAGCGGGAGGGGTCTCTGC-CCTGGCCCCAGGGC--CCCACCGGCCCCTCCGCAGCCTACCGGCC--CC---GCGGCATCCCAGAGCCGACCCAGGCCCAACTAGAGGAATGGCTGCAGAGCTGGGATCCTAATGACACAGGGCAGTGGTGGAGCATTAAGAGTTCGGTGGTAAACATGCACTGAAATACAGtcatgctgtgcagaagctctttagtgtaattagatcccttttgtcagttttggcttttgttgccattgcttttggtgctttagtcatgaa-gtctttgcccatgcctatgtcctgagtggtattgcctaggttttcttctagggtttttctggttttaggtcttacgtttaagtctgtaatccatc-----ttaatttttgtatgaggtgtcaggaaggggtccagtttcagttttctgcataagACTAgccagagtgaacaggtaacctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttacaaggaacttaagtaaatttacaagaagaaaacaaaccatcCCATCAGAAAGTgtgcaaagcatatgaacagacacttctc-----aagacatttatgcagccaacaaac--at--gaaaaaaaactcatcatcactgatcattagagaaacgcaaatcaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91390994 965 + 91754291 CACGTGGCCTAGTCTGGGCCTC--TGCGTTTTCCTCCAGCTGGTCAGTGGTGTGAAAGGT-GGGGGGTTCCAGCAGGTCTCACAGGGAGACAAGGCAGGAAGGGGCTGAGAATAGCAAGTGAGAGGGTATTGGTAGGACGGACAATGCAGGAGCTGGATGGACTGGAGGGGCTGAGCGATCGCCACCCAGAGATATTTGGGGTACCCTTCCCCAGTCCCCAGCCCCCG-------ACCCTCCACGGGAGGCGGGAGCAGCGGGCGGGCCTGCCGGGGGCC-AGACGCCCAGGCAGTGGGATGTGGAGTGGGAGGGGCCTCCGC-TCTGGCCCCTCCGCAGCCCACCGGCCCCTCCGCAGCCCACCGGCC--CC---GCGGCATCCCAGAGCTGACCCAGGCCCAACTAGAGGAATGGCTGCGGAGCTGGGATCCTAATGACACAGGGCAGTGGTGGAGAATTAAGAGTTCGGTGGTAAACATGCATTGAAATACAGTCAtgctgtgcagaagctctttagtgtaattagatcccttttgtgagttttggcttttgttaccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctatgtcctgagtggtattgcctaggttttcttctagagtttttctggttttaggtcttatgtttaagtttttaatccatcttgagttaatttttgtataaggtgtcaggaaggggtctagtttcagttttctgcataagaccagccagagtgaacaggcaacctacagaatgggagaaaatttttacaatctatccatctgacaaagggctaatatccagaatttataaggagcttaagtaaatttacaagaagaaaacaaacaatcccatcagaaagtgtgcaaagcatatgaacagacacttctc-----aacacatttatgcagccaacaaacatat--gaacagaagctcatcatcactgatcattagagaaacgcaaatcaaa i chlSab2.chr15 I 8 C 0 s calJac3.chr17 73897636 930 + 74750902 AGCCTGACCTAATCTTGG------TGCGTTTTTCTCCAGCAGGTCAGCGGTGTGAGAGTTTGTGGGTTTCTAGAAGGTCTGACAGGGAGACAGTGCAGGAAGGGGCTGAGAATAGCAAGCGAGAAGTTATTGGTAGGATGGACAATGCAGGAGCTGGATGGATTGGAGGGGCTGAGTGATCACCACTGAGAGATATTTGGGGTACCCAGCCCCAA-CCCCAGCCCC---------GCCATCC-CAGGAGGTGGGAGCAGCAGGTGGGCCTGAGGGGAGCCTGGGCGCCCAGGCGGTGGAATGTG-AGCGTGAAGGCTCTCCGCGCCCCGCCCTGGGTC--CCCACCGGTGCCTCTGCCACCCACCAGCTGGCC---TTGGCATCCCAAA------CCAGGCCTAA-TAGAGGAAGGGCTGCAGAGTTGGGATCCCACTGACACAGGATGG-GGTGGAGCTCTAAGG---CACTGGTAAATGTGCACTGAAATATAGTCATGC--------agctcttgagtttaattaga-------------ttttggcttttgatgccattgcttttggtgttttagtcatgaa-gtctttgcccatgcctacgtcctgaatggtattgcctagcttttcttctaggatttttgtggttttaggtcttacgtttaaatctttaatccatcttgagttaatttttgtataaggtgtaagaaagggatctagtttcagttttctgcatatgactagccagagtgaacaggcaacctacagaatgatagaaaa--cttgcagtctatccatctgacaaaggtctaatatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacgatcccatcagaaagtgggcaaaggatatgaacagacacctttcaaaagaagacatttatgcagccaacaaac--atatgaagaaaagctcatcatcactggtcattagagaaatgcaaatcaca i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=220874.000000 s hg38.chr3_KI270937v1_alt 98961 134 + 165607 accacaatgagatatcatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaggatgtagagaaataggaatagttttacactgttggtgggagtgcaaattagttcaacc s panTro4.chr3_GL389630_random 75452 134 - 103936 accacaatgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaggatgtagagaaataggaacatttttacactgttggtgggagtgcaaattagttcaacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2427456 134 - 202140232 accacaacgagataccatctcacaccagttagaatggtgatcattaaaaagtcaggaaacaacagatgctggagaggatgtagagaaataggaatgtttttacactgtttgtgggagtgcaaattagttcaacc i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192447224 134 - 192460366 accataatgagataccatctcactccaggtagaatggtgatcattataaagtcaggaaacaacaagtgctgcagaggatgtggaggaacaggaacacttttacactgttggtgggactgtaaactagttcaacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187366182 134 + 187378091 accacaatgagataccatctcactccaggtggaatggcaatcattataaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaacc i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91391959 134 + 91754291 accacaatgagttaccatctcacaccaggtagaatggtgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaataggaacacttttacactgttggtgggactgtaaactagttcaacc i chlSab2.chr15 C 0 I 82 s calJac3.chr17 73898566 132 + 74750902 actcccgtgagataccatctcgcgccagttagaatggcaatgatt--aaagtcgggaaacaacagatgctggagaggatgtggagaaatagaaacgcttttacactgctggtgggagtgtaaattagttcaccc i calJac3.chr17 C 0 C 0 e rheMac3.chr2 192594823 585 + 192599291 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=170095.000000 s hg38.chr3_KI270937v1_alt 99095 139 + 165607 attgtggaagacagtgtggcgattcctcaaggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataaatcattctactgtaaagacacatgcacacgtatgtttatt s panTro4.chr3_GL389630_random 75586 139 - 103936 attgtggaagacagtgtggcgattcctcaaggatctagaactagaaataccatttgacccagccatcccattactgggtatatacccaaaggattataactcattctactgtaaagacacatgcacacgtatgtttatt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2427590 139 - 202140232 attgtggaagacagtgtggccattcctcaaggatctagaactagaaataccatttgacccagcaatcccattactgggtatatacccaaaggattataaatcattctactataaagacagatgcacacgtatgtttatg i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192447358 139 - 192460366 attgtggaagacagtgtggcgattcctcaaggatctagcactagaaataccatttgacccagcaatcccattactgggtatatgcccaaaggattataaatcatgctgctataaagacacatgcacacatacgtttgtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187366316 139 + 187378091 attgtggaagacagtgtggcgattcctcaaggatctagcgctagaaataccatttgacccagccatcccattactgggtatatgcccaaaggattataaatcatgctgctataaagacacatgcacacatacatttgtt i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73898698 139 + 74750902 attgtggaagacggtgtggagactcctcaaggacctacaactagaaacaccatttgacccagcaatcccattactgggtatatactcgatggattataaatcactctactgaaaggacacatgcacacatatgcttatt i calJac3.chr17 C 0 I 957 e chlSab2.chr15 91392093 82 + 91754291 I e rheMac3.chr2 192594823 585 + 192599291 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=6300.000000 s hg38.chr3_KI270937v1_alt 99234 17 + 165607 ta-------------ttattt----ttgagacgg s panTro4.chr3_GL389630_random 75725 21 - 103936 ta-------------ttatttatttttgagacgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2427729 21 - 202140232 ta-------------ttatttatttttgagacgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192447497 32 - 192460366 tgcttatttatttatttatttatttttgatac-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187366455 32 + 187378091 tgcttatttatttatttatttatttttgatac-- i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73898837 957 + 74750902 I e chlSab2.chr15 91392093 82 + 91754291 I e rheMac3.chr2 192594823 585 + 192599291 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=573318.000000 s hg38.chr3_KI270937v1_alt 99251 446 + 165607 agtcttgctctgttgccaggctggagtgcagtggcacggtctcggctcactgcaacctccacctcccgggttcaagcgattctcttgcctcagcctcctgagtagctggaactacaggcacacaccaccacgcccagctaattttttgcattttactagagaaggggtttcaccatgttggccagaatggtcttgatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgggattacaggtttgagccaccgcgcccagccccgagcacatgtatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgcccatcaatgacagactggttaaagaaaatgtggcacatagacaccatggaatactatgcagccataaaaaagg-atgagttcatgtcctttgcaggatcatggatgaca s panTro4.chr3_GL389630_random 75746 446 - 103936 agtcttgctctgttaccaggctggagtgcagtggcacggtctcggctcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcctgagtagctggaactacaggcacacaccaccacgcctggttaattttttgcattttactagagaaggggtttcaccatgttggccaggatggtcttgatctcctgacctcgtgatccacccgcctcagcctcccaaagtgctgggattacagatttgagccaccgcgcccagccccaagcacatgtatgtttattgcagcactattcacaatagcaaagacttggaaccaacccaaatgtccatcaatgatagactggttaaagaaaatgtggcacatagacaccacggaatactatgcagccataaaaaaag-atgagttcatgtcctttgcagggacatggatgaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2427750 446 - 202140232 agtcttgctctgttaccaggctggagtgcagtggtgcggtctcggctcactgcaacctccacctcccagtttcaagtgattctcctgcctcagcctcccgagtagctggaactgcaggcacacaccaccatgcccggctaattttttgcattttactagagatggggtttcaccatgttgaccaggatggtcttgatctcctgacctcatgatccacccgcctcagcctcccgaagtgctgggattacaggtttgagccaccatgcccagccccaagcacatgtatgtttattgcggcactattcacaatagcaaagacttggaaccaacccaaatgcccatcaatcataaactggttaaagaaaatgtggcacatagacaccacggaatactatgcagccataaaaaagg-atgagttcatgtcctttgcagggacatagatgaca i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192447529 447 - 192460366 agtcttgctctgtcaccaggctggagtgcaatggcatagtctcggctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggcacacaccaccacgcctggctaattttttgcattttactagagacggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccatcgtgcccatccccaagcacacatatgtttattgcagcactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataaagaaaatgtggcacatatacactatggaatactatacagccataaaaaaagcatgagttcatgtcctttgcagggacatggatgaag i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187366487 446 + 187378091 agtcttgctctgtcaccaggctggagtgcaatggcatagtctcggctcactgcaacctccatctcccaggttcaagtgattctcctgcctcagcctcccgagtagctggaaccacaggcacacaccaccacgcctggctaattttttgcattttactagagacggggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccacccgcctcagcctcccaaagtgctgggattacaggcgtgagccatcgtgcccatccccaagcacacatatgtttattgcagcactattcacaatagcaaagatttggaacctacccaaatgtccatcaatgatagactggataaagaaaatgtggcacatatacactatggaatactatacagccataaaaaagg-atgagttcatgtcctttgcagggacatggatgaag i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91392175 447 + 91754291 agtcttgctctgtcaccaggctggagtgcaatggcacggtctcagctcactgcaacctccacctcccaagctcaagtgattctcctgcctcagcctcccgagtagctggaactacaggcacacaccaccacgcctggctaattttttgcattttactagagacgaggtttcaccatgttggccaggatggtctcgatctcctgaccttgtgatccacccgcctcagcttcccaaagtgttgggattacaggcgtgagccatcgtgcccagccCcaagcacacatatgtttattgcagcactattcacaatagcaaagatttagaacctacccaaacatccatcaatgatagactggataaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaagggatgagttcatgtcctttgcagggatatggatgaag i chlSab2.chr15 I 82 C 0 e calJac3.chr17 73898837 957 + 74750902 I e rheMac3.chr2 192594823 585 + 192599291 M e nomLeu3.chr11 2883701 10 - 123690457 I a score=483135.000000 s hg38.chr3_KI270937v1_alt 99697 297 + 165607 ctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcactcataagtggaagttgaacaatgagaacatatggacacagggaggggaacatcacacaccggtgcctgttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacatatatacctatgtaacaacgctgcacgttct------------------------------------------------------------------gcacatgtatcccagaacttaaagtataataataat-aataaT s panTro4.chr3_GL389630_random 76192 297 - 103936 ctggaaaccatcattctcagcaaactaacagaggaacagaaaaccaaacaccacatgttctcactcataagtgggagctgaacaatgagaacatatggacacagggaggggaacatcacacactggtgcctgttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggttgatgggtgcagcaaaccaccatggcacatatatacctatgtaacaaccctgcatgttct------------------------------------------------------------------gcacatgtatcccagaacttaaagtataataataat-aataat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428196 360 - 202140232 ctggaaaccatcattctcagcaaactaacacaggaacagaaaaccaaacactgcatgttctcattcataagtgggagttgaacaatgagaacatatggacacagggaggagaacatcacacaccagtgcctgttgggaggttgggggcaaggggagggatagcattaggagaaatacccaatgtagatgacaggtttatgggtgcagcaaaccaccatggcacatatatacctatgtaacaaacctgcacgtcctgcannnnnnnnnntgcagcaaaccaccatggcacatatatacctatgtaacaaacctgcacgtccggcacatgtatcccaaaacttta---ataataataat-aataat i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192595428 294 + 192599291 ctggaaaccatcattctcagcaaactatcacaggaatagaaaaccaaagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggaggggaacatcacacaccggggcctgtcagggggtggggggctggggcagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaa-caccatggcacgtacatacctatgaaacaaacctgcacgttct------------------------------------------------------------------gcacatg--tcccagaacttaaagtataataataataaataaT i rheMac3.chr2 M 585 C 0 s macFas5.chr2 192447976 294 - 192460366 ctggaaaccatcattctcagcaaactatcacaggaatagaaaaccaaagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggaggggaacatcacacaccgcggcctgtcagggggtggggggctggggcagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaa-caccatggcacgtacatacctatgaaacaaacctgcacgttct------------------------------------------------------------------gcacatg--tcccagaacttaaagtataataataataaataaT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187366933 295 + 187378091 ctggaaaccatcattctcagcaaactatcacaggaatagaaaaccaaagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggaggggaacatcacacactggggcctgtcagggggt-gggggctggggcagggagagcattaggagaaatgcccaACGGAgctgacgggttgatgggtgcagcaaa-caccACGGCATGTAcatacctatgaaacaaacctgcatgttct------------------------------------------------------------------gcacatgtatcccagaatttaaagtataataataataaataat i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91392622 297 + 91754291 ctggaaaccatcattttcagcaaactatcacaggaatagaaaaccaaagaccgcatgttctcactcataagtgggagttgaacaatgagaacacatggaca-agggaggggaacatcacacaccagggactgtcagggggtagggggctaggggagggagagcattaggagaaatacccaatgtagatgacgggttgatgggtgcagcaaaccgccatggcacatatatacctatgaaacaaacctgcacgttct------------------------------------------------------------------gcacgtgtatcccagaacttaaagtataataataataaataaT i chlSab2.chr15 C 0 C 0 e calJac3.chr17 73898837 957 + 74750902 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=142714.000000 s hg38.chr3_KI270937v1_alt 99994 73 + 165607 AA------AGGAATTGAGAGACTGTTGATATCAACTGTTCCCTGAGCCACATGGAAAGCTGTATCCTCTGCAGGCTGC--T s panTro4.chr3_GL389630_random 76489 79 - 103936 aataataaAGAAATTGAGAGACTGTTGATATAAACTGTTCCCTGAGCCACATGGAAAGCTGTATCCTCTGCAGGCTGC--T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428556 73 - 202140232 aa------agaaattgagagaCTGTTGATATCAACTGTTCCCTGAGCCACATGGAAAGCTGTATCCTCTGCAGGCTGC--T i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192595722 74 + 192599291 AAT-----TCAAATTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGGAAAGCTGTATCCTCTGCAGGCTGCT-- i rheMac3.chr2 C 0 I 36 s macFas5.chr2 192448270 73 - 192460366 AAT-----TCAAATTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGGAAAGCTGTATCCTCTGCAGGCTGC--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187367228 73 + 187378091 aat-----tcaaattGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGGAAAGCTGTATCTTCTGCAGGCTGC--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91392919 74 + 91754291 AAT-----TCAAATTGAGAGAATGTTGATATCAACTGCTCCCTGAGCCACATGGAAAGCTATATCCTCTGCAGGCTGC-T- i chlSab2.chr15 C 0 I 37 s calJac3.chr17 73899794 73 + 74750902 ------aaagaaaTTGAGAGAATGTCGATATAAACTGCTCCTTGAGCCATTTGGAAAGTTGTGTCTGCTGCAGGTTGC--T i calJac3.chr17 I 957 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=85842.000000 s hg38.chr3_KI270937v1_alt 100067 112 + 165607 TGGTGAGTATGTGAGG------AGGTATATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG s panTro4.chr3_GL389630_random 76568 112 - 103936 TGGTGAGTATGTGAGG------AGGTATATTCATTCACTTTGAGACCTATTTCTCTAAGAAAGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAGCCACTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428629 112 - 202140232 TGGTGAGTATGTGAGG------AGGTATATTCATTCACTTTGAGACTTATTTCTCTAAGAAGGGGTCCTGAAAGGC-TTTCCCCTGCTACAGGGACAGCCCTTGGCAAGGAAACCACTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448343 77 - 192460366 ----------------------------------------TGAGATGTGTTTCTGTAAG-AGGGGTCCTGAAAGGC-TTTCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTG i macFas5.chr2 C 0 T 40 s papAnu2.chr2 187367301 77 + 187378091 ----------------------------------------TGAGACATGTTTCTGTAAG-AGGGGTCCTGAAAGGC-TTTCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTG i papAnu2.chr2 C 0 T 39 s calJac3.chr17 73899867 118 + 74750902 TGGTGAGTATGTAAGGAGCACAAGGTTCATTTATTCACTTTGAGAAGCATTTCTCTAAG-AAGGTGTCTGAAAGACTTTTCTCCTGCGACAGGGATAGCCCGCAACAAGGAAGTCACTT i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91392993 37 + 91754291 I e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=4772.000000 s hg38.chr3_KI270937v1_alt 100179 10 + 165607 TCCTCAGGCA s panTro4.chr3_GL389630_random 76680 10 - 103936 TCCTCAGGCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428741 10 - 202140232 TCCTTGGGCA i ponAbe2.chr3 C 0 C 0 s calJac3.chr17 73899985 10 + 74750902 TCCTTGGGCA i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91392993 37 + 91754291 I e papAnu2.chr2 187367378 39 + 187378091 T e macFas5.chr2 192448420 40 - 192460366 T e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=2530.000000 s hg38.chr3_KI270937v1_alt 100189 15 + 165607 C----ACAGGGCTCCTTCA s panTro4.chr3_GL389630_random 76690 15 - 103936 C----GCAGGACTCCTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428751 19 - 202140232 CATAGACAAGGCTCCTTCA i ponAbe2.chr3 C 0 C 0 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e papAnu2.chr2 187367378 39 + 187378091 T e macFas5.chr2 192448420 40 - 192460366 T e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=546.000000 s hg38.chr3_KI270937v1_alt 100204 1 + 165607 T s panTro4.chr3_GL389630_random 76705 1 - 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428770 1 - 202140232 T i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448380 1 - 192460366 T i macFas5.chr2 T 40 C 0 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e papAnu2.chr2 187367378 39 + 187378091 T e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=54321.000000 s hg38.chr3_KI270937v1_alt 100205 68 + 165607 CTCCTGCAACAGATACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAGCACATAGACAGGGCTCCTTCA s panTro4.chr3_GL389630_random 76706 68 - 103936 CTCCTGCAACAGATACAGCCCTTGGCAAGGAAGGCACTGTCCTTGAGCACATAGACAGGGCTCCTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428771 64 - 202140232 CTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTCAGGCAC----ACAGGGCTCCTTCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448381 68 - 192460366 CTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGCACACAGACAGGGCTCCTTCA i macFas5.chr2 C 0 T 69 s papAnu2.chr2 187367339 68 + 187378091 CTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGCACACAGACAGGGCTCCTTCA i papAnu2.chr2 T 39 T 69 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=59871.000000 s hg38.chr3_KI270937v1_alt 100273 69 + 165607 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGCCCTTGAGCACATAGACAGGGCTCCTTCA s panTro4.chr3_GL389630_random 76774 69 - 103936 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAGCACATAGACAGGGCTCCTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428835 69 - 202140232 TCTCCTGCGACAGGGACAGACCTTGGCAAGGAAGCCACTGTCCTTGGGCTCATAGACAGGGCTCCTTCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448380 69 - 192460366 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGCACACAGACAGGGCTCCTTCA i macFas5.chr2 T 69 T 69 s papAnu2.chr2 187367338 69 + 187378091 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGCACACAGACAGGGCTCCTTCA i papAnu2.chr2 T 69 T 69 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=42314.000000 s hg38.chr3_KI270937v1_alt 100342 49 + 165607 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAGC s panTro4.chr3_GL389630_random 76843 49 - 103936 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAGC i panTro4.chr3_GL389630_random C 0 T 69 s ponAbe2.chr3 2428904 49 - 202140232 TCTCCAGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTCAGGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448380 49 - 192460366 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGC i macFas5.chr2 T 69 C 0 s papAnu2.chr2 187367338 49 + 187378091 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGGC i papAnu2.chr2 T 69 C 0 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=9109.000000 s hg38.chr3_KI270937v1_alt 100391 13 + 165607 ACATAGACAGGGC s panTro4.chr3_GL389630_random 76823 13 - 103936 ACATAGACAGGGC i panTro4.chr3_GL389630_random T 69 C 0 s ponAbe2.chr3 2428953 9 - 202140232 ----ACACAGGGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr2 192448429 13 - 192460366 ACACAGACAGGGC i macFas5.chr2 C 0 T 22 s papAnu2.chr2 187367387 13 + 187378091 ACACAGACAGGGC i papAnu2.chr2 C 0 C 0 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=3984.000000 s hg38.chr3_KI270937v1_alt 100404 7 + 165607 TCCTTCA s panTro4.chr3_GL389630_random 76836 7 - 103936 TCCTTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2428962 7 - 202140232 TCCTTCA i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 187367400 7 + 187378091 TCCTTCA i papAnu2.chr2 C 0 T 69 e calJac3.chr17 73899995 0 + 74750902 C e chlSab2.chr15 91392993 37 + 91754291 I e macFas5.chr2 192448442 22 - 192460366 T e rheMac3.chr2 192595796 36 + 192599291 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=51811.000000 s hg38.chr3_KI270937v1_alt 100411 48 + 165607 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG s panTro4.chr3_GL389630_random 76843 48 - 103936 TCTCCTGCAACAGGGACAGCCCTTGGCAAGGAAGCCACTGTCCTTGAG i panTro4.chr3_GL389630_random C 0 I 1 s ponAbe2.chr3 2428969 48 - 202140232 TCTCCTGCAACAGGGACAGACCTTGGCAAGGAAGCCACTGTCCTTGGG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192595832 40 + 192599291 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTG-------- i rheMac3.chr2 I 36 C 0 s papAnu2.chr2 187367338 48 + 187378091 TCTCCTGCAATAGGGATGGCCCTTGGCAAGGAAGCCACTGTCCTTGGG i papAnu2.chr2 T 69 C 0 s chlSab2.chr15 91393030 40 + 91754291 TCTCCTGCAATAGGGGCGGCCCTTGGCAAGGAAGCCACTG-------- i chlSab2.chr15 I 37 C 0 e calJac3.chr17 73899995 0 + 74750902 C e macFas5.chr2 192448442 22 - 192460366 T e nomLeu3.chr11 2883701 10 - 123690457 I a score=600.000000 s hg38.chr3_KI270937v1_alt 100459 1 + 165607 C s ponAbe2.chr3 2429017 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 187367386 1 + 187378091 C i papAnu2.chr2 C 0 C 0 s calJac3.chr17 73899995 1 + 74750902 C i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91393070 0 + 91754291 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac3.chr2 192595872 0 + 192599291 C e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 76891 1 - 103936 I a score=11737.000000 s hg38.chr3_KI270937v1_alt 100460 13 + 165607 ACATAGACAGGGC s panTro4.chr3_GL389630_random 76892 13 - 103936 ACACAGACAGGGC i panTro4.chr3_GL389630_random I 1 C 0 s ponAbe2.chr3 2429018 13 - 202140232 ACATAGACAGGGC i ponAbe2.chr3 C 0 C 0 s papAnu2.chr2 187367387 13 + 187378091 ACACAGACAGGGC i papAnu2.chr2 C 0 T 22 s calJac3.chr17 73899996 13 + 74750902 ACATAGACAGGGC i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91393070 0 + 91754291 C e macFas5.chr2 192448442 22 - 192460366 T e rheMac3.chr2 192595872 0 + 192599291 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=8064.000000 s hg38.chr3_KI270937v1_alt 100473 46 + 165607 TCCTTCATCTCCTGCGACAGGGACAGCCCTTGGCAAGGATGTCACT s panTro4.chr3_GL389630_random 76905 46 - 103936 TCCTTCATCTCCTGCGACAGGGACAGCCCTTGGCAAAGATGTCACT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2429031 46 - 202140232 TCCTTCATCTCCTGCGACAGGGACAGCACTTGGCAAGGAAGCCACT i ponAbe2.chr3 C 0 I 1 s calJac3.chr17 73900009 4 + 74750902 -CCTT----------------------------------------- i calJac3.chr17 C 0 C 0 e chlSab2.chr15 91393070 0 + 91754291 C e papAnu2.chr2 187367400 22 + 187378091 T e macFas5.chr2 192448442 22 - 192460366 T e rheMac3.chr2 192595872 0 + 192599291 C e nomLeu3.chr11 2883701 10 - 123690457 I a score=535427.000000 s hg38.chr3_KI270937v1_alt 100519 243 + 165607 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGACAGCAGATAGATATGCAATGCAAGCCTTGGTTTTTTGGGATGATTCCAATGCAGCACCAgatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagTCAATTTACTGTTCTTCTGTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG s panTro4.chr3_GL389630_random 76951 243 - 103936 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGACAGCAGATAGATATGCAATGCAAGCCTTGGTTTTTTGGGATGATTCCAATGCAGCACCAgatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcaccttcataaggaataaagTCAATTTACTGTTCTTCTTTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2429078 243 - 202140232 TCCTCGGGCACACAGACAGGGCTCCTTCAGCAGACAGCAGACAGATATGCAATGCAAGCCTTGGTTTTTTGGGATGGTTCCAATGTAGCACtggatacgtgtgtccaattctggggtttgctcataggaaacccatgtgccagcaaatctatgtcacgttctccagtatcacctttataaggaataaagTCAATTTACTGTTCTTCTTTAA----AAAGAAAGAAACGTATTCATGACTGTAGCTCG i ponAbe2.chr3 I 1 C 0 s rheMac3.chr2 192595872 244 + 192599291 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGGCAGCAGATAGATATGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCCAATGTAGCACtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taAAAAGAAAGAAAGAAACGTAGTCATGACTGTAGCTTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192448420 240 - 192460366 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGGCAGCAGATAGATATGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCCAATGTAGCGCtggatacgtctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatgtatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taA----AAAGAAAGAAACGTAGTCATGACTGTAGCTTG i macFas5.chr2 T 22 I 361 s papAnu2.chr2 187367378 244 + 187378091 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGGCAGCAGATAGATATGCAATGCAGGCCTTGGTTTTTTGGGATGGTTCCAATGTAGCACTGGATACGTCTGTCCAATTCTGGGGTTTGTTCATAGGAAACCCATGTGCCAGCAAATCTATGTCACATTCTCCAGTATCACCTTTATAAGGAATAAAGTCAATTtattgttctt---taaaaagaaagaaagaaacgtaGTCATGACTGTAGCTTG i papAnu2.chr2 T 22 I 259 s chlSab2.chr15 91393070 239 + 91754291 TCCTTGGGCACACAGACAGGGCTCCTTCAGCAGACAGCAGATAGATATGCAATGCAGGCCTTGG-TTTTTGGGATGGTTCCAGTGTAGCACtggatacatctgtccaattctggggtttgttcataggaaacccatgtgccagcaaatctatgtcacattctccagtatcacctttataaggaataaagtcaatttattgttctt---taA----AAAGAAAGAAACGTAGTCATGACTGTAGCTTG i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73900013 211 + 74750902 ------------------------------CAGACAACAGGGAGATACAGAATGCAGGCCTTGGCTTTCTGTGATGGTCCCAATGTAGCACtgggtaagtctgtccagttttggggtttattcacaggaaacccacatgccagcgaatctatgtcacattctccagtatcagctttataaggaacgaagTCAATTTACTGTTCTT--AAAA----AAAGAAAGAAATGTAGCCGTAACTGTAGCTTA i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=2800.000000 s hg38.chr3_KI270937v1_alt 100762 1 + 165607 G s panTro4.chr3_GL389630_random 77194 1 - 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2429321 1 - 202140232 G i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192596116 1 + 192599291 G i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192449021 1 - 192460366 G i macFas5.chr2 I 361 C 0 s papAnu2.chr2 187367881 1 + 187378091 G i papAnu2.chr2 I 259 C 0 s chlSab2.chr15 91393309 1 + 91754291 G i chlSab2.chr15 C 0 I 102 s calJac3.chr17 73900224 1 + 74750902 G i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=32045.000000 s hg38.chr3_KI270937v1_alt 100763 15 + 165607 CTGTCACTCAAGTGC s panTro4.chr3_GL389630_random 77195 15 - 103936 CTGTCACTCAAGTGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2429322 15 - 202140232 TTGTCACTCAGGTGC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192596117 15 + 192599291 CTGTCACTCAGGTGC i rheMac3.chr2 C 0 I 342 s macFas5.chr2 192449022 15 - 192460366 CCGTCACTCAGATAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187367882 15 + 187378091 CCGTCACTCAGATAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91393412 15 + 91754291 CTGTCACTCAGGTGC i chlSab2.chr15 I 102 C 0 s calJac3.chr17 73900225 15 + 74750902 CTGTCATTCAAGTGC i calJac3.chr17 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=383527.000000 s hg38.chr3_KI270937v1_alt 100778 177 + 165607 AAGTGAATGGTGGATGTGGC-CGCGCGGCT-CCACGCACTGATTCATAATCCCCAAAAGGGACAAGGGCAGACCCAGCTCTCTGCAGGGCAAACGCTCCACAACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACTCCCTCTTCTATTTCCCACCTCCctctttcccgttc s panTro4.chr3_GL389630_random 77210 177 - 103936 AAGTGAATGGTGGATGTGGC-CGCATGGCT-CCACCCACTGATCCATAATCCCCAAAAGGGACCAGGGCAGACCCAGCTCTCTGCAGGGCAAATGCTCCACAACCCAAAACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACTCCCTCTTCTATTTCCCACCTCCCTCTTTCCCGTTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2429337 177 - 202140232 AAGTGAATGGTGGATGTGGC-CGCGCGGCT-CCACCCACTGATCCATAATCCCCAAAAGGGACCAGGGCAGACCCAGCTCTCTGCAGGACAAACGCTCCACAACCCAATACACTTGTTTCTGTTGTTGTTGCTGTTTGGAAACTCCCTCTCCCATTTCCCACCTCCCTCTTTCCCGTTC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192596474 176 + 192599291 AAGTGAATGGTGGATGTGGC-CGCGCAGCT-CCACGCGCTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATGCTCCACAACCCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAACTCCCTCTCCTATTTCCCACCTCCCTCTTTTCCGTTC i rheMac3.chr2 I 342 C 0 s macFas5.chr2 192449037 176 - 192460366 AAGTGAATGGTGGATGTGGC-CGCGCAGCT-CCACGCGCTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATGCTCCACAACCCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAACTCCCTCTCCTATTTCCCACCTCCCTCTTTTCCGTTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187367897 176 + 187378091 AAGTGAATGGTGGATGTGGC-TGCGCAGTT-CCACGCACTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCACCAGGGCAAATGCTCCACAACCCAACACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAATTCCCTCTCCTATTTCCCACCTCCCTCTTTTCCGTTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91393427 176 + 91754291 AAGTGAATGGTGGATGTGGC-CGCGCGGCT-CCATGCACTGATCCATAATCCCCACAAATGTCCAGGGCAGACCCAGCTCTCTCCAGGGCAAATGCTCCACAACTCAATACACTTGTTTCTGTTG-TGTTGCTGTTTGGAAActccctctcctatttcccacctccctgtttcccgttc i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73900240 179 + 74750902 AAGCAAATGGTGAATGTGACTCACGCGGCTGATACGCACTGATACACAATCCTCAAGAGCATCCCGGCCGGACACAGCGTCGTGCAGGGCAAATGCTCCACAACCCAATAAACTTGTTTCTGCTGTTCTTGCTGTTTGGAAATTCCCTTTCCTATTTCCCCCCTCTCTCTTTCCTGTTC i calJac3.chr17 C 0 I 316 e nomLeu3.chr11 2883701 10 - 123690457 I a score=697060.000000 s hg38.chr3_KI270937v1_alt 100955 338 + 165607 tcattcccttttctctgctcctatttctgtttccctCAGTTCCACCTAATACCCCGT-GGTGTCACCCTAGCCCTTTCCTCTACCCACTCCAGCCTTACTACCCCCAACGTCCCACACCCTGGGAAACACCAAGGTCTGCCTCTGTACCTCCAAGTTCTTTCCCC--GTT---ATTGCCCTGGGTCAGTcctttgtgggggctcctctctcctctcttgatttcttttcatctggctaacctctaatcctgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggaggacctaaaagccattctgctggcctcccagagctgaatctgcc s panTro4.chr3_GL389630_random 77387 340 - 103936 TCATTCCCTTTTCTCTGGTCCTATTTCTGTTTCCCTCAGTTCCAcctaataccccgt-ggtgtcaccctagccctttcctctacccactccagccttactacccgcaacgtcccacaccctgggaaacaccaaggtctgcctctgtacctccaagttctttccccctgtt---attgccctgtgtcagtcctttgtgggggctcctctctcctctcttgatttcttttcatctggctaacctctaatcctgtaagatttacctcaaatatctttcaagaagtattttctgaatccaaggaggacctaaaagccattctgctggcctgccagagctgaatctgcc i panTro4.chr3_GL389630_random C 0 I 12 s ponAbe2.chr3 2429514 343 - 202140232 TCATTCCCTTTTCTCTGCtcttatttctgtttccctcagttccacctaatatcctgt-ggtgtcaccctagccctttcctctacccgctccagccttactacccccaacgtcccacaccctgggaaacaccaaggtctgcctctgtacctccaagctctttccccctgttctcattgccctgggtcagccctttgtgggagctcctctctcctctcttgatttcttttcatctggctaacctctagtcctgtaagatttagctcaaatatctttcaggaagtattttctgaatccaaggaggacctaaaagccattctgctggcttcccagagctgaatctgcc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192596650 337 + 192599291 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGG-GGTGTCACCCTAGCcctttcctctacccactccagccttactacccctaacgtcccgcaccccaggaaacaccagattctgcctc--tacctccgagctctttcccc-tgttctcactgccctgggtcagccctttgcaggagctcctcttttccctcttgatttattatcatccggctaacctctaatcctgtaagatttagctcgaatctctttcgagaagtattttctgaatccaaggaggacctaaaagccattctgctggcctcccagagctgaatctcc- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192449213 337 - 192460366 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGG-GGTGTCACCCTAGCcctttcctctacccactccagccttactacccctaacgtcctgcaccccaggaaacaccagattctgcctc--tacctccgagctcttttccc-tgttctcactgccctgggtcagccctttgcgggagctcctctttcccctcttgatttattatcatccggctaacctctaatcctgtaagatttagctcgaatctctttcgagaagtattttctgaatccaaggaagacctaaaagccattctgctggcctcccagagcTGAATCTCC- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187368073 337 + 187378091 TCGTTCCCTTTTCCCTGCTCCTATT--TGTTTCCCTCAGTTCCGCCTAATACCCCGT-GGTGTCACCCTAGCCCTTTCCTCTACCCGCTCCAGCCTTACTACCCCCAACGTCCCGCACCCCAGGAAACACCACATTCTGCCTC--TACCTCCGAGCTCTTTCCCC-TGTTCTCACTGCCCTGGGTCAGCCCTTTGCGGGagctcctctttcctctcttgaTTTATTGTCATCCGGCTAACCTCTAATCCTGTAAGATCTAGCTCGAATCTCTTTCGAGAAGTATTTTCTGAATCCAAGGAGGACCTAAAAGCCATTCTGCTGGCCTCCCAGAGCTGAATCTCC- i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91393603 339 + 91754291 tcattcccttttccctgctcctatT--TGTTTCCCTCAGTTCCGCCTAATACCCTGT-GGTGTCACCCTAGCCCTTTCCTCTACCCGCTCCAGCCTTACTTTCCCCAACATCCTACACCCCGGGAAAAACCAAATTCTGCCTCCGTACCTCCGAGCTCTTTCCCC-TGTTCTCACTGCCCTGGGTCAGCCCTTTGCGGGAGGTCCTATTTCCTCTCTTGATTTATTATCATCCAGCTAACCTCTAATCCTGTAAGATTTAGCTCGAATCTCTTTCGAGAAGTATTTTCTGAATCCAAGGAAGACCTAAAAGTCATTCTGCTGGCCTCCCGGAGCTGAATCTTC- i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73900735 312 + 74750902 TTATTCCCTTTTCGC-GCCCCCGTTTCTGTTTCCCTCAGCTCCACCTAAtgccccatgggtgtcgccccagccctttcctccacccgctgcagccttactgtccccaacgtcctacactc-gggaatcaccaaa-tctgcctctttacctccaagctctttcc---cgct-------------gtcaggcctttgca-gagcccctgtttcctctcttggtttattttcatccagcttacctctaatcctgtaagatttagctcaaatctctttagagaagtattttctgaatccaaggaggacctaaaagccattctgcccatctcaca---------ct--- i calJac3.chr17 I 316 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I a score=275487.000000 s hg38.chr3_KI270937v1_alt 101293 164 + 165607 catctc------------ccccggattataTTAAAATTATAAGTCATGTAAAATCCTTTTGGAACGAGACAGGGTATGA-TAAATAAGAAATATTCAACAAGTATACGTTACTTGTGTACACATACCACCTGACTTCTTTAACAACACATTGCAAGAAATAAAAAGATG----GAGACATA s ponAbe2.chr3 2429857 165 - 202140232 catctc------------ccccagattataTTAAAAttataagtcatttaaaatccttttggaacaagacagggtatgagtaaataaGAAATATTCAACAAGTATACGTTATTTGTGTACACATACCACCTGACTTCTTTAACAATACATTGCAAGAAATAAAAAGATG----GAGACATA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192596987 177 + 192599291 catctcacgcttacccctccctggattatattaaaattatAAGTCATTTAAAATCCTTTTGGAACAAGACAGGGTATGAGTAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatacattgcaagaaacaaaaagatg----gagACATA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 192449550 177 - 192460366 CATCTCACGCTTACCCCTCCCCGGATTATATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAAGACAGGGTATGAGTAAAAAAGAAATACTCAATAACTGAACATTATTTGTGTACacatactacttgatttctttaacaatacattgcaagaaataaaaagatg----gagacata i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187368410 177 + 187378091 CATCTCACGCTTACCCCTCCCcggattatattaaaattataagtcATTTAAAATCCTTTTGGAACAAGACAGGGTAtgagtaaaaaagaaatactcaatAACTGAACATTATTTGTGTACACATACTACTTGATTTCTTTAACAATACAttgcaagaaataaaaagatg----gagacata i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91393942 177 + 91754291 CATCTCACGCCTACCCCTCCCCGGATTACATTAAAATTATAAGTCATTTAAAATCCTTTTGGAACAAGACAGGGTATGAGTAAAAAAGAAATACTCAATAACTGAACGTTATTTGTGTACacatactacctgatttcttttacaatacattgcaagaaataaaaagatg----gaggcata i chlSab2.chr15 C 0 C 0 s calJac3.chr17 73901047 169 + 74750902 cacccc------------tcccagattatattaatatcataagtcattttaaatctttttggcacaagacagggtacgagtaaacaaGAAGTACTCAATAATTGCATGTTATTTGCGTACACACACCACCTGATTTCTTTAACGACACATTGCAAGaaataaaaagacggacagagacata i calJac3.chr17 C 0 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=9620.000000 s hg38.chr3_KI270937v1_alt 101457 7 + 165607 Cggctgg s ponAbe2.chr3 2430022 7 - 202140232 Tggctgg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 192597164 7 + 192599291 TGGCTGG i rheMac3.chr2 C 0 N 0 s macFas5.chr2 192449727 7 - 192460366 tggctgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187368587 7 + 187378091 tggctgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91394119 7 + 91754291 tggctgg i chlSab2.chr15 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=309106.000000 s hg38.chr3_KI270937v1_alt 101464 288 + 165607 gcgcagtggctaatgcctgtaatcccagcactttgggaggccaaggcaggtggatcac-tgaggtcaggagttcgacaccagcctggccaacatggtgaaacccccatctctactaaaaatacaaa-aattagccaagtgtggtggcaggcacctgtaatcccagctactcggaaggctgaggcaggagaatctcttgaacccggaatgcggagcttgcagtcaagcaagattatgccactgcactccagcctgggtgacacagcaagactccatctcaaaaaaaaaaaa s ponAbe2.chr3 2430029 287 - 202140232 gtacagtggctgacgcctgtaatcccagcactttgggaggccaaggcaggtggatcac-tgaggtcaggagttcgagaccagcctggccaacatggtgaaacccc-gtctctactaaaaatacaaa-aattagccaagtgtggtggcaggcacctgtaatcccagctactgggaaggctgagggaggagaatctcttgaacccggaatgcagagcttgcagtcagccaagattatgccactgcactccagcctgggtgacacagcaagactccatctcaaaaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461222 287 - 180491593 gcgcggtggctcacgcctgtaaccccagcactttgggaggccgaggcaggcagatcac--aaggtcaggagatagagaccatcctggctaacacggtgaaacccc-gtctctactaaaactacgaacaattagcggggcgtggtggcggggacctgtaatcccagctaggcggacggccgaggcaggagaatggcgggaacctgggaggcggagcttgcagtgagccaagatgacgccactggactccagcccacctgacagagcgagactccatctccaaaaagaaaag i rheMac3.chr6 N 0 C 0 s macFas5.chr2 192449734 286 - 192460366 gcgccgtggctcacgcctgtaatcgcagcac-ttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaacccc-gtctctactaaaaatacaaa-acttagccgggtgtggtggcggcg-cctgtagtcccagcttctcgggaggctgaggcagcagaatctcttgaacccgggaggaggaggttgtagtgagccaagaccgcaccactgctctccagcctgggtgacagagtgagactccgtctcaaaaaaaaaaaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187368594 286 + 187378091 gcgcggtggctcacacctgtaatcgcagcac-ttgggaggccgaggcgggtggatcacctgaggtcgggagtttgagaccagcctggccaacatggtgaaacccc-gtctctactaaaaatacaaa-acttagccgggtgtggtggcggcg-cctgtagtcccagcttctcgggaggctgaggcaggagaatctcttgaacccgggaggaggaggttgtagtgagccgagaccgcaccactgctctccagcctgggtgacagagtgagagtccatctccaaaaaaaaaaa i papAnu2.chr2 C 0 C 0 s chlSab2.chr15 91394126 287 + 91754291 gcgcagtggctcacgcctgtaatcgcagcac-ttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaacccc-gtctctactaaaaatacaaa-aattagccgggtgtggtggcgggtgcctgtaatcccagcttctcggaagtctgaggcaggagaatctcttgaacccgggaggaggaggttgtagtgagccaagatcgcaccactgctctctagcctgggtgacagagtgagagtccatctcaaaaaaaaaaaa i chlSab2.chr15 C 0 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=3094.000000 s hg38.chr3_KI270937v1_alt 101752 10 + 165607 -aaaaagaaa---------a s ponAbe2.chr3 2430316 19 - 202140232 -aaaaaaaaagaaagaaaaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461509 10 - 180491593 gaaaaaagaa---------- i rheMac3.chr6 C 0 C 0 s macFas5.chr2 192450020 10 - 192460366 aaaaaaaaaa---------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 187368880 10 + 187378091 aaaaaaaaaa---------- i papAnu2.chr2 C 0 N 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=1589.000000 s hg38.chr3_KI270937v1_alt 101762 5 + 165607 agaaa s ponAbe2.chr3 2430335 5 - 202140232 agaaa i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461519 3 - 180491593 --aaa i rheMac3.chr6 C 0 C 0 s macFas5.chr2 192450030 3 - 192460366 --aaa i macFas5.chr2 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=2409.000000 s hg38.chr3_KI270937v1_alt 101767 14 + 165607 aagaaaaa-aCACCA s ponAbe2.chr3 2430340 14 - 202140232 aagaaaaa-aCACCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461522 7 - 180491593 a--------aCACCC i rheMac3.chr6 C 0 C 0 s macFas5.chr2 192450033 15 - 192460366 aagatggagacacac i macFas5.chr2 C 0 N 0 s calJac3.chr2 204139828 14 + 204313951 AAAGAAAA-ACACCG i calJac3.chr2 N 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=32797.000000 s hg38.chr3_KI270937v1_alt 101781 72 + 165607 TGCATGCATACTCATATGAATGTACAAATGGATGAGTCTAGAACAAAAGATACTAGCCTGATACATATACAA s ponAbe2.chr3 2430354 72 - 202140232 TGCATGTATACTCATATGAATGTACAAATGGATGAGTCTAGAACAAGAGATACTGGCCTGATACCTATACAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461529 72 - 180491593 TGCGTGCATACTCATACGAATGCACAAATGGATGTGTCTAGAACAAGAGATACTGGCCTGATATATACACAA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204139842 72 + 204313951 TGCATGCACACCCATGTCAATGTCCAAATGGGCGAGTCTAGAACAAGAAATACTGGCCTGATACATACACAA i calJac3.chr2 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=15546.000000 s hg38.chr3_KI270937v1_alt 101853 33 + 165607 ACTATGCAGCTGCAGTCCCTGCCTCTTCCGCAA s ponAbe2.chr3 2430426 33 - 202140232 ACTATGCAGCTGCAGTCCCTGCCTCTTCTGCAA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461601 33 - 180491593 ACTATGCAGCTGCAGTCCACGCCTCTTCCGCAA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204139914 31 + 204313951 AC--CGCAGCTGCAGTCCCTGCCTTTTCCGCAA i calJac3.chr2 C 0 I 420 s canFam3.chr34 11931147 33 + 42124431 actaaaccgctgcgccacccagggatcccTCAG i canFam3.chr34 N 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=4437.000000 s hg38.chr3_KI270937v1_alt 101886 10 + 165607 CCCTGACCTC s ponAbe2.chr3 2430459 10 - 202140232 CCCTGACCTC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461634 10 - 180491593 CCCTGCCCTC i rheMac3.chr6 C 0 C 0 s canFam3.chr34 11931180 10 + 42124431 CCCTGATTTC i canFam3.chr34 C 0 C 0 e calJac3.chr2 204139945 420 + 204313951 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=110083.000000 s hg38.chr3_KI270937v1_alt 101896 230 + 165607 TAAGAAAGCTCTAACTCTGAAT-CCTGT----------------------CAGCACCTGGGCTGTGCTGCTTGGGACAACATTGTCTT-CACAAGTCCTCTCCACATTCTCAGAGGTGGGGGTATTGCCAATGATGGGG--GTTACTGCCT-GAGTCCCGTCAC-------CAGGGG-ACAAAGCTACAGCAGACACCACCATCT-GCCAACAAAAAGAGAGATCATCTCCCACCCctggttctgctgacgcaatcactggaagca s ponAbe2.chr3 2430469 228 - 202140232 TAAGAAAGCTCTAACTCTGAAT-CCTGT----------------------CAGCACCTGGGCTGTGCTGCTGGGGACAACATTGTCTT-CACAAGTCCTCTCCACATTCTCAGAGGTGGGGGTATTGCCAATGATGGGG--GATGCTGCCT-GAGTCCCGTCAC-------CAGGGG-ACAAAGCTACAGTGGAGACCACCATCT-GCCAACAAA--GAGAGATCATCTCCCATCCCTTGTTCTGCTGACCCAATCACTGGAAGCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461644 228 - 180491593 TAAGAAACCTCCAGCTCTGAAT-CCTGT----------------------CAGCACATGGGCCGTGCTGGT-GGGACAACATTGTCTT-CACAAGTGCTCTCCACATTCTCAGAGGCGGGGGTTTTGCCATTGATGGGG--GATGCTGCCT-GAGTCCCGTCAC-------CAGGGG--CAAAGCTACAGCGGAGACCACCATCT-GCCAACAAAAAGAGAGACCATCTCCCACCCCTGGTTCTCCTGACCCAATCACTGGAAGCA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204140365 226 + 204313951 TAAGGAGCCTCCAGCCCTGAAT-CCTGT----------------------TGGCACCTGGGCTGTGCTGTGTGGGACAACACTTTCTTCCCCAAGTCCTCTCCACATTCTCAAAGGTGGGGGTACTGCCACTGATGGGG--GATTCTGCCT-GAGTCCTGTCCC-------CAGGGG-GCGAGGCTGCAGCGGAAACCACCATCT-GCCAACAAA----AAGCTCACCTCCCAGCCCTGGTTCTGCAGACTGAATCACTGG-AGCA i calJac3.chr2 I 420 C 0 s canFam3.chr34 11931190 251 + 42124431 TAATGAGCCACTGGCTCCAACTGTCTGCATGGAACAGGTCGGGTGGGGCACAGCACCTGGGCCATACTGCTAGGGCAGGCCTAAGCCT-TG-GGGTCCTCTCAGT-------------GAATTGCTGCCATTGGTGGGGACGGTGTTGCCTGGAGTCCTGTGGCCTCATGGCAGAGATGCGCAGCCACAGGGGAGACCGTCTCCTCGCCAGCAGAAAGATGCAGCCTAGCCCCTgcctagttctacagactcaatcacttaaagta i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=152990.000000 s hg38.chr3_KI270937v1_alt 102126 224 + 165607 tcgaggca----ccactatgt-----cctcacctgcctc-ggattcaatttcctcctagccaggtctgttctaaggtctcca-----------------------gaagttgagaaattaattgaaagataaca---ctttcctccctgtgttaaggtttatcacataatgtatccaaatactgggccagtctttcctttggtctcat------------ttctatgagctaatctg-----aaaatgccttttctgttttcc-ttagaatttttcta s ponAbe2.chr3 2430697 224 - 202140232 TTGAGGCA----CCACTAtct-----cctcacctgcctc-agattcaatttcctcctagtcaggtctgttctaagctttcca-----------------------gaagttgagaaattaattgaaagataaca---ctttcctccctgtgttacggttaatcacataatgtatccaaatactgggtcagtctttccttcggtctcat------------ttctctgagctaatctg-----aaaatgccttttctgttttcc-ttagaatttttctA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180461872 216 - 180491593 TCCAGGCA----CCGCGAT--------ctcacctgcctc-cgattccgtttcctcctagccaggtctgttctaagctttcca-----------------------gaagtggagaaattaactgaaagagaaca---ctttcctccctgtgttaaggttaatcacataatggatccaaatactgggtcagtctttactgtggtctcat------------ttct-----ctaatttg-----aaaatgccttttctgttttcc-ttagaatttttctA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204140591 223 + 204313951 CTGAGGTA----CCACTAtct-----cctcacctgcccc-ggattcaatttcctcctaaccaggtctgttctaagctttcca-----------------------ggagttgagaaattaactgaaagatatca---ctttcctccctgtgttaacgttaatcacataatgtatccaaatactgggtgagtctttcct-tggtctaat------------ttctctgagctaatttg-----aaaatgccttttctgtttccc-ttagaatttttttA i calJac3.chr2 C 0 I 918 s mm10.chr13 74318740 229 + 120421639 Tccaggtg----ccaccatctatctccttgccctatctc-aggtttagtttcctcttaaccaggtctgttctaagctttcc--------------------------agtAGAGAAATAAAT---GAGATAACC---CTGTCCTCCT----ATGATGTTAATCATATCATGTGTCTGCATATTGGGCCACTCTTTCCTTTAACCTAATTCTCTGAGCTACTTCTTTGAGCTACTATATACACAAAAT--------TGTTTTCCTTTAGAACTTTTCTA i mm10.chr13 N 0 I 7 s canFam3.chr34 11931441 220 + 42124431 ttaatgtacttgccactatcc-----cctcgcctatcttgggattcagttccctcttaaccaggtctgttctaagctttccaagtagatggtgctcctggatgggagaggagagaaataaactgaaagacaacactgctctcttcctcccattaacgttag-cacataatgtatcta-atgttgggccagt--------tgg----------------------------------------aaaatgccttt--tattaccc-ttagaactttttaa i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=8904.000000 s hg38.chr3_KI270937v1_alt 102350 46 + 165607 ------aatgtttctgggcgcttgtgttcctgaGGCTTTCCACAGTGCACCC s ponAbe2.chr3 2430921 46 - 202140232 ------AATGTTTCTGGGCACTTGTGTTCCTGAGGCTTTCCACAGTGCACCC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180462088 35 - 180491593 ------AGCGTTTCTGGGCGCGTGTG-----------TTCCACAGTGCACCC i rheMac3.chr6 C 0 C 0 s mm10.chr13 74318976 38 + 120421639 ------GCTCTTTCTGGGAGCTGAGGTGCATGAAA--TGGGTAAGT------ i mm10.chr13 I 7 C 0 s canFam3.chr34 11931661 50 + 42124431 acattggctatttctgggtgctagcattcctaaca--cttcatagtctaccc i canFam3.chr34 C 0 C 0 e calJac3.chr2 204140814 918 + 204313951 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=217275.000000 s hg38.chr3_KI270937v1_alt 102396 513 + 165607 tcttgtt--catctgatgtctttggca-cata-taggccctcga----caggtagttgttcaatgaacag---------atGACCATCCTGTCCTTTGTGTGAACAAGCATA-----GCAAGTGCACAT---TGTATCTGTTTGTGTATCC-----AAC---AGC-GTCCCTCCAAAGCCACTTT------------GTTCACTTATTTTC---TCAGGATCACGGACGG-CTGCATCTTG-ACATAAGCACACAGAATCTTTCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGCACAGAGCCAACCATGCCTGGCACCCCCTCCTGTCTTGGGACAAGGATACTTTCTCCTGTGGCTCCCATCTTGCTTCCAA-CATTCTTCTGCCAGAATTCAGTTTGGCGGACAATGACCTACTACTTTTAATTTTTTTCCCCTTTTTGCTCTTCTACCAAATACCGCTTTTCACCCAGGCTTTTCACTGCGTAGTGGACAATCTATCAAACAGGTGCTGTCCAGCGTGAGGGGCAG-TTGCAAAGGTCTGCA s ponAbe2.chr3 2430967 513 - 202140232 TCTTGTG--CATCTGATgtctttggca-cata-caggccctcga----caagtagttgttcaatgaacag---------atGACCATCCTGTCCTTTGTGTGAACAAGCATA-----GCAAGTGCACAT---TGTATCTGCACATGTATCC-----AAC---AGC-ATCCCTCCCAAGCCACTTT------------GTTCACTTATTTTC---TCAGCATCACTGATGG-CTGCATCGTG-ACATTTGCACACAGAATCTTTCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAGAGCCAACCACGCCTGGCACCCCCTCCTGTCTTGGGACAAGGATACTTTCTCCAGTGGCTCCCATCTTCCTTCCAA-CATTCTTCTGCCAGAATTCAGTTTGGAGGACAATGACCTACTACTTTTAATTTTTTTCCCCTTTTTGCTCTTCTACCAAATACCGCTTTTAACACAGGTTTTTCACTGAGTAGTGGACAATTTATCAAATAGGTGCTGTTCAGTGTGAGGGGGCA-TTTGAAAGGTCTGCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180462123 514 - 180491593 TCTTGTG--CATCTGATgtctttggca-cata-taggccctcga----caagtatttgttgaatgagcgg---------atGACCATCCTGTCCTTCATGTGAACAAGCATA----TGCAAGTGTACAT---TGTGTCTGTACATGTATCC-----AGC---AGC-ATCTCTCCAAAGCCACTTTG-----------GTTCACTTATTTTC---TCAGGATTACTGACGG-CTGCATCATG-ACATTTGCACACAGAATCTTTCCTTTTCCAGTCACTTTTCCTTTTTCCAGATTCCGGCCATAGAATTCCA-GGGACAGAGCCAACCGTGCCTGGCACCCCCTCCTGTCTTGGGACAAGGATACTTTCTCCTGTGGCTCCCGTCTTCCTTGCAA-CATTCTTCTGCCAGAATTCAGTATGGAAGACAATGACCTGCCACTTTTAATTTTTT--CCCGTTTTGCTCTTCTACCAAATACCGCTTTTAACACAGGCTTTTCACTGAGTAGTGGACAATCTATCAGATAGGTGCTGTTCGGTGTGAGGGGGCATTTGCAAAGGTCTGCG i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204141732 500 + 204313951 TCTTGTTGCAATCTGAAGTCTTTAGCACCATA-AGAGCCTCCGA----CAAAGTGTTGT--GATGAACAG---------ATGACCAT-CTGTCCTTTGTGTAAACGAGCATA----CACAAGTCCACATACATG-----GCACATGCATCC-----AAC---AGC--CCCCTCCGAAGCCACCTGG-----------GTTCAGTTATTTTT---TCAGGATCACTGACCG-GTGCATCGTG-ACATTTGCACACAGAATCTTTCCTTTTTCAGTCACTTTCCCTTTTTCCAGATTCCAGCCATGGAATTCCA-GGGACAGAGCCAACCGTGCCTGGCACCCCCTTCTGTCCTGGGAC-----TACTTTCTCCTGTGGCTCCCGTGTTCCTTCCAA-CATTGTTCTGCCAGAATTCAATATGGAAGAGAATGACCTACCCTTTT---TCTCCCCCTCTTTTTTACTCTTCTACCAAATACCGCTTTTCACACAGGCGTTTCACTGAGTAGTGGACACTCT----GATAGGTGCTGTTCAGTGTGAGAGAGCG-TGGGCAAAGGCCACA i calJac3.chr2 I 918 C 0 s mm10.chr13 74319014 363 + 120421639 CATTGTC--------ATATCTTTTGCA-----------------------------------------------------TAAAGATCTTTTTGTATGTGTACAGACGCATG--------------------CGTGTTCTTATACATATCT-----AATTTAAGT-GTACCTCT-AAGCCACATTG-----------GTTCCTTTGCTT-------------ACTGGTGGAATGCACCCTGAACATTTGCACATGGAAGA--CAAATTTTCAGTTA------ACTTTTCCTGAT--------------------------AGCCAAATATGCTCAGCACACCCTTCTTTCTCTAG-TGTTAAAACTGTCACT--TGGCTCCAAT---------AA-AATTCT--GGTTTGAATTTAATACTAAAGAGA---ACCTATCACTCTTTA-------------------------------------TGTAACTCAAGCTTCTTAGTGAGTATTGATGAGTGTGTCAAATGTGCGCTAGATGGTGTGAGGGAGCA---GCAAACGTCCACA i mm10.chr13 C 0 I 2341 s canFam3.chr34 11931711 458 + 42124431 tcttgtt--catcgtatgtcttTGGCA-TATAGTGAACTCTCAAATGTTAAACAAATGG--GATGACCAAGTAAGTTATATGTCCATTCTTTTGTGTGTGTGAATGTGTGCATGGGCGCACGCACACAC---ACACACTTTGTATGTATCCACCCTAAC---AGCTTTCCCTCTGAAGGCACATTGAGTTGTCATTTGTGC-CTTATTTTCTCATCAAGACCACCAATGACTTGTACTGTG-ACATTTACACGCTAGAGA----CCTTCTCTGTCACTT--CCCTTTTACAGACTCTGG-TGCAGAATTCTAGGGGATGGAGCCAGCTGTGCCCA----------------------------------------GGCCTCCGCCTCCTTTCCAACCAATAT--TGTCAGAATTCAGTATGAAAGAGAATGACTGACCACTTTTTA-------------------------------------TTTAACTCAGGTTTTATATTAGGTAGTGGCCAATTTATC--ATAGGTGCTGTTTAATACAC--------TAGTGACTGTGTATA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=36116.000000 s hg38.chr3_KI270937v1_alt 102909 91 + 165607 Tcggtgctggctgatggaactttccggtgatggcatcattccgtagctgcactgtccagtgaggaggctacttgccac-tgtggctactgct---- s ponAbe2.chr3 2431480 91 - 202140232 Tcagtgctggctgatggaactttccggtgatggcatcattccgtagctgcactgtccagtgaggaggctacttgccac-tgtggctactgCT---- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180462637 91 - 180491593 Tcagtgctggctgatggaactttccagtgatagcatcgttccatagctgcactgtccagtgcggaggctacttgccac-tgtgtctactgCT---- i rheMac3.chr6 C 0 I 2536 s calJac3.chr2 204142232 58 + 204313951 TCAGTGCTGGCCGATGGAACTTCCCGGCGATGCCACCGTTCCGCAGCTGCACAGCCCA-------------------------------------- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11932169 90 + 42124431 CTGCTGTTGGTGaacagaactttc------tgcaacaatccgactgctctgctgtccagtgtggcagccacttgccacatgtagctactgaccact i canFam3.chr34 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=1911.000000 s hg38.chr3_KI270937v1_alt 103000 25 + 165607 tgggatgGTGCA--------------------------------------------GGTCTGAATATCT s ponAbe2.chr3 2431571 25 - 202140232 CGGGATGGTGCA--------------------------------------------GGTCTGAATATCT i ponAbe2.chr3 C 0 I 108 s calJac3.chr2 204142290 18 + 204313951 -------GTGCA--------------------------------------------GGTCTGAGTATCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11932259 69 + 42124431 tgaaatggatcaaggggactagggaatgtaattttaagttttatgtaattttggtgagcttaaatagct i canFam3.chr34 C 0 I 19 e mm10.chr13 74319377 2341 + 120421639 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=99071.000000 s hg38.chr3_KI270937v1_alt 103025 413 + 165607 TACTCACAGCT----------------CACCTT--TTTGGTGCCTTTGATCCGTATTAGGAATTATCCACATCTTCTCTCTGGGCAATATTCTA----CTTTTTATATTGACCCAATTATTT------TACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCCTGAAACCCACATT-TACAAAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATTGTTCCATGACTC----ATTACTGGAGTA---------------------------------------------CCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGTAGTAGACACACGCACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTGCCATCCTATCATGCTTCAGGGG--TGCCTGTGCT s ponAbe2.chr3 2431704 419 - 202140232 TACTCACAGCT----------------CACCTT--TTTGGTGTCTTTGATCCATGTTAGGAATTATCCAAATCTTCTCTCTGGGCAACATTCTATTTTCTTTTTATATTGACCCAATTATTT------TACTTCTTCGGTGTGTCCTTTCTCCTAACACATACGGGTTCACTTTGAAACCTTGAAACCCACATT-TACAAAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACACCATTCCATGACTC----ATTAGTGGAGTA---------------------------------------------CCATCAACATTTACATTTCGAGAACACCCACTGCCCAGTGGTTTTCTTGGTCTCAG--TACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGTAGTAGACACACACACAC-AACACTGCCTGTCAGTTATTTCTCGGAAACTAAATCAGCCCTTCTGTTGCCATCCTATCATGCTTCAGGGG--TGCCTGTGCT i ponAbe2.chr3 I 108 C 0 s calJac3.chr2 204142308 408 + 204313951 CAGACACAGCT----------------CACCTT--TTTCCTGCCTTTGATCCGTGTTAGGAATTATCCACGCCTTCTCTCCGGGCAACATTCTACGTTCTTTTTATATTGACCCAATGATTT------TACTTCTTTGGTTTGTCCTTTCTCTGAACAAGCATGGGTTCATTTTGAAACCTTGAAACCCACATT-TAC-AAAACATTTTCAATATGAA---------------------------------------------------------------------------------------------------------------------ACATCGTTCTATGACTCAGTAATTAGTGGAGCA---------------------------------------------CTATAAAAATTTACTTTTC-AGACCACCCACTGCCCAGTGGCTTCCTTGGTCTCAG--TACTCATGAGAACTGTCTGAGGGTTTGTTTCTGATTCCT---TAGTAGACATACACACAAGGAAGCTGCCCAGCAGTTATTC-----------GATTGGCCCTTCCGTTGCCACCCTATCATACTTCAGGGG--TGCCTGTGCT i calJac3.chr2 C 0 I 294 s canFam3.chr34 11932347 586 + 42124431 tatggacagTTGAAGAGTACTGTACTGTATCTTAATTTTTTGCTTTTGATCCATATTAGAAATTAACCACA---TCTCTCTGGATAGTATTCTA---GTTTTTTACCTTGATGCA--CATTTAAAAAAAATTTCTCTGCTCTGTAAATTCCCCTAACA--TGTGGGTTCTCTTAGAA--CCTTGAATATACATTGTAC-AAAATATTTCCAGTACAgagatgcctgggtggctcagcagttgagcttctgccttcagctcagggcatgatccagcaatcccggaatagagtcccacattggggtctctgcatggagcctgcttctcactctgcctacatctctgcctgtctc--tcatgaataaaacaaacaaacaaaaaaaaACCCATATTACCAGTATGAAATATTCTGTCCCATAGGAACTTGTATTTCCAG---ACCTACT--CCCGTGATTTTCTTGGTTTCAGAATGTTCATAAAAATGGTCCACAGGTTGACTTTTGGTTGAAAAGTAGCAGATATAAGGAAG---CCAGGGCCT--CAGTTACTTCTTTGAAACC-AATCAGCCCTTCTGT---CATCTAATTATGCTTCAGGTACCTGCCTTTGCC i canFam3.chr34 I 19 C 0 e mm10.chr13 74319377 2341 + 120421639 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=82304.000000 s hg38.chr3_KI270937v1_alt 103438 267 + 165607 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTC--TTACTGGTTGGGATGAAGCTGCCTGAGGTTG------------CCACCTGTTATTT-----------TTCCTTCATTTATTGGACCATGTCATCCCATTACATGTTAGCCGTGGAGGTTTTCAAACTGTGTTCcctggacatgttagaaatgcaaattctcagaccgaa--ccagga----ctgaatcggaagatctggggtagggtc s ponAbe2.chr3 2432123 267 - 202140232 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTC--TTACTGGTTGGGATGAAGCTGCCTGAGGTTG------------CCACCTGTTATTT-----------TTCCTTCATTTATTGGACCATATCATCCCATTATATGTCTGCCATGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcagaccgaa--ccagga----ctgcattggaagatctgaggtagggtc i ponAbe2.chr3 C 0 C 0 s calJac3.chr2 204143010 282 + 204313951 AGCTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCCGTGTTAATAC-TACTCTTAGTTTTCAGAAGGCTTGGGGATTTACTTTC--TTACTGGCTGGGATGAAGCTTCCTGAGGTTGCCAGG-GGGTCTCCACCTGTTGTTG-----------TTCCCCCGTTTATCGGACCGTGTCATCCCATTACATGTCTGCCACAGAGGTTTCCAAACTGTGGTCcctgggcatgttagaaatgccaattctcaggcctaa--ccagga----ctga--tggaagttctggggtagggtc i calJac3.chr2 I 294 C 0 s canFam3.chr34 11932933 287 + 42124431 AGCTTTTCATTCATTGTCCTAACACTTAAATG-ATGTTTAGATGCCCATATTTATACTTCCACT---TCTGCAATATTCTTTGGCACGCTGTTTCATCTACTGGTTAGCATGGAG--GTCTGAAGTTGTCAGTCATCTCTCCACCTGTTATCTTCTGAAAATCATCTCCATGTTTGTT-GACCACATCACCCCA-AACAGGT----------GGTTTTCAAAGGGTGGGCCCTgaacatactacacatgcagattctcaggaccaaccccaggacctgctgaaccagaagtcctgggatggggtc i canFam3.chr34 C 0 I 90 e mm10.chr13 74319377 2341 + 120421639 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=1502.000000 s hg38.chr3_KI270937v1_alt 103705 6 + 165607 cCTCCA s ponAbe2.chr3 2432390 6 - 202140232 cCCCCA i ponAbe2.chr3 C 0 C 0 s calJac3.chr2 204143292 6 + 204313951 cCTCCA i calJac3.chr2 C 0 I 588 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933220 90 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=13642.000000 s hg38.chr3_KI270937v1_alt 103711 182 + 165607 GGACTGAAAACGGAAGGTCTGGGGTGGGGTACCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGGACTGAATCGGAAGGTCTGGACGAGGGTCCCCCCAGGACTGAATCAGAAGATCTGGGGTAGGGTCTCCCCAGGACTGAATCGGAAGGTCTGGGGTGGGGTCCCCCCAGG s ponAbe2.chr3 2432396 179 - 202140232 GGACTG-AATCGGAAGATCTGGGGTGGGGTCCCCCAGGACTGAATCGGAAGATCTGGGGTGGGGT-CCCCCAGGACTGAATCGGAAGGTCTGGGATAgggtccccccaggactgaattggaagatctagggcggggt-tccccaggactggatcggaagatctggggtagggtccctccagg i ponAbe2.chr3 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=0.000000 s hg38.chr3_KI270937v1_alt 103893 108 + 165607 ACTGAATTGGAAGGTCTGGACTAGGGCCCCCCCAGGACCGAATCGGAAGGTCTGGACTAGGGTCCCCCCAGGACTGAATTGGAAGGTCTGGGGTAGCGTCCCTCCAGC e ponAbe2.chr3 2432575 0 - 202140232 C e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=9424.000000 s hg38.chr3_KI270937v1_alt 104001 112 + 165607 TGATCCTGTTACACAGGTTAGAGAACCATGGCATTAGGGGTAGCAATTTGACAAttcttttttttttttttt--gagacagagtctcactcttgttgcccaggctggagtgcag s ponAbe2.chr3 2432575 114 - 202140232 tgatcctgttacacagcttagagaaccacGGcattaggggtggcaatttgacaattttttttttttttttttcggagacagagtttcactcttgttgcccaggctggagtgcag i ponAbe2.chr3 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I e panTro4.chr3_GL389630_random 77727 12 - 103936 I a score=46193.000000 s hg38.chr3_KI270937v1_alt 104113 170 + 165607 tggcgcactctcggctcactgcaacctccgtctcccaggttcaagcaactctcctgcctcagcctcctgagtagctgggattacaggcacccatcatcatgcctggctaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAattcttaaa s panTro4.chr3_GL389630_random 77739 170 - 103936 tggcgcactcttggctcactgcaacctccgtctcccaggttcaaacaactctcctgcttcagcctcctgagtagctgggattacaggcacccaccatcatgcctggctaattttttgtatttttagagatggggtttcactatgttggccaggctggGACAATTCTTAAA i panTro4.chr3_GL389630_random I 12 C 0 s ponAbe2.chr3 2432689 170 - 202140232 tggcgcactctcggctcactgcaacttccgtctcccaggttcaagcaactctcctgcctcagcctcccaagtaactgggattacaggcacccaccatcatgcctggctaattttctgtatttttagagacggggtttcactatgttggccaggctgggacaattcttaaa i ponAbe2.chr3 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933220 90 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=18834.000000 s hg38.chr3_KI270937v1_alt 104283 53 + 165607 ctgtcattctttactcacttacttgcaggaattct----tatgtaaagaactttccc s panTro4.chr3_GL389630_random 77909 53 - 103936 ctgtcattctttactcacttatttgcaggaattct----tatgtaaagaactttccc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2432859 53 - 202140232 ctgtcattctttactcacttatttgcaggaattct----tctataaagaactttccc i ponAbe2.chr3 C 0 C 0 s canFam3.chr34 11933310 51 + 42124431 ctatcattccttactcctttatct------attttattatccataaaatacttttcc i canFam3.chr34 I 90 C 0 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e rheMac3.chr6 180462728 2536 - 180491593 I e nomLeu3.chr11 2883701 10 - 123690457 I a score=168014.000000 s hg38.chr3_KI270937v1_alt 104336 255 + 165607 taatcaacaaggtttccctgaattgcaatttgtagagaaaagacaggataattact----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctaggtacctccaagagtgaccaattacatgtgtttgtttggt-t----ttggctttgaaaccaccactatgaat--------tcatggttttCATGTAtt-------------------agaga-------------------ccactttctaggtgcttgatgtgtctactgctactggggcagaggtagaaaatgtgtctacg s panTro4.chr3_GL389630_random 77962 259 - 103936 taatcaacaaggtttccctgaattgcagtttgtagagaaaagacaggataattgct----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctgtgtacctccaagagtgaccaatTACATGTGTTTGGTTGGT-TGGTTTCGGCTTTGGAACCATCACTATCAAT--------TCACGGTTTTCATGTATT-------------------ACAGA-------------------CCACTTTCTAGGTGCTTGATGTGTCTACTGCTACTGgggcagaggtagaaaatgtgtatacg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2432912 259 - 202140232 taatcaacaaggtttccctgaatcgcaatttgtagaaacaaggcaggataatcgct----gatcttccttcaagtgtccattcccagtgttaggagttagtgccctgggtacctccaagagtgaccaattacatgtgtttgttTGGT-TGGTTTGGGCTTTGAAACCATCACTATGAAT--------TCATGGTTTTCATGTATT-------------------AGAGA-------------------CCACTTTCTAGGTGCTTGATGTGTCTACTGCTACTGGGGCAGAGGCAGAAAATGTGTATACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2883711 259 - 123690457 TAatcaacaaggtttccctgaattgcaatttgtagagaaaaggcaggataatcact----gatcttccttcaagtatccattcccagtgttaggagttagtgccctaggtacctccaagagtgaccaatTACATGTGTTTGTTTGGC-TGGTTTTGGCTTTGAAACCATCACTATGAAT--------TCATGGTTTTCATATAtt-------------------agaga-------------------ccactttctaggtgcttgatgtgtctactgctactggggcagagctaggaaatgtgtctacg i nomLeu3.chr11 I 10 C 0 s canFam3.chr34 11933361 298 + 42124431 taatcaactaggttatcctgaatggcaatttgtggattaaaggcaggataaccatttcactattttcctctaattgtccattttcagtattagtagttagtgccctagttacttccaaaagtgat----------tgtttgctcagtgttggctgagtttttaaactatcattataaatgaacatactaatgtttttaatATAGTCAATCTGTGGCTATGGGGGAGAGAGGGCAGTGGTAAGCAGACCCCACAATCAGGGTGCTTA--GAGCCCACTGCTACTGGGGCAGAGAGGGGCAgtgtgtgtgtg i canFam3.chr34 C 0 I 73 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=40022.000000 s hg38.chr3_KI270937v1_alt 104591 79 + 165607 gtaaaagaacaacaaatgagttcacgcttatatttctatttcaaatttagtatacggttttacacctttttctcagaaa s panTro4.chr3_GL389630_random 78221 79 - 103936 gtaaaagaacaacaaatgagttcacgcttatatttgtatttcaaatttagtatatggttttacacctttttcaaagaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433171 79 - 202140232 ATAAAAGAACAACAAATGAGTTCATGCTTATATTTCTATTTCAAATTTAGTATATGGTTTTACACCTTTTTCTCAGAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2883970 79 - 123690457 tgaaaagaacaacaaatgagttcacgcttatatttctatttcaaatttagtatatggttttacacctttttctcagaaa i nomLeu3.chr11 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e calJac3.chr2 204143298 588 + 204313951 I e canFam3.chr34 11933659 73 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=910.000000 s hg38.chr3_KI270937v1_alt 104670 1 + 165607 a s panTro4.chr3_GL389630_random 78300 1 - 103936 a i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433250 1 - 202140232 A i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884049 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 204143886 1 + 204313951 a i calJac3.chr2 I 588 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933659 73 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=101023.000000 s hg38.chr3_KI270937v1_alt 104671 180 + 165607 atcttgttttattttttgagatagagttttgttcctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaatctctgcctcctgt-ttcaagcgattctcctgcttcagcctccccaatagctgggattacaggcacctgccaccatgcccag-ctaatttttc-aattttag s panTro4.chr3_GL389630_random 78301 180 - 103936 atcttgttttattttttgagatagagttttgttcctgttgcccaggctggagtgcagtggcacaatctcggctcactgcaatctctgcctcctgg-ttaaagcgattctcctgcttcagcctccccaacagctgggattacaggcacctgccaccatgcccag-ctaatttttc-aattttag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433251 180 - 202140232 ATCttgttttattctttgagatagagttttgttcttgttgcccaggctggagtgccatggcacaatctcagctcactgcaatctccacctcctgt-ttcaagtgattctcctgcttcagcctcctgaatagctgggattacaggcacctgccaccatgcccag-ctaatttttg-aattttag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884050 180 - 123690457 atctttttttattttttgaggtagagttttgttcctgttgcccaggctggagtgccgtggcacagtctcggctcactgcaatctctgcctcctgg-ttcaagcgattctcctgcctcagcctcccaaacagctgggattacaggcacctaccaccatgcccag-ctaattttgg-aattttag i nomLeu3.chr11 C 0 C 0 s calJac3.chr2 204143887 150 + 204313951 attttgtatttttagtagagacagagtttc-tccatattgctcaggctgg-------------------------------tcttgaactcctgacctcaggtga-tctactgctttggcttcccaatgtgctgggattacaggtgtgagccactgcgcctggcctaatttttgtatttttag i calJac3.chr2 C 0 C 0 s canFam3.chr34 11933732 123 + 42124431 gccttggctcaggtcatgatataggggt------------cccgggattgagccctg----------------cgttgggttccctgcttggtgg-------agagtctgcttctccctctccc----------------------tctgcccctccaactag--tgatttctc-aatctcaa i canFam3.chr34 I 73 I 59 e mm10.chr13 74319377 2341 + 120421639 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=73182.000000 s hg38.chr3_KI270937v1_alt 104851 92 + 165607 tagagat-ggcgtttcaccatgttggccaggctggtctcaaactcctgacctcaggtcatctgcccacctcggcctccc-aaagtgctgggact s panTro4.chr3_GL389630_random 78481 92 - 103936 tagagat-ggggtttcaccatgttggccaggctggtctcaaactcctgacgtcaggtcatctgcccgcctcggcctccc-aaagtgctgggatt i panTro4.chr3_GL389630_random C 0 I 13 s ponAbe2.chr3 2433431 92 - 202140232 tagagat-ggggtttcaccatgttggccaggctggtctcaaactcctggcctcaggtgatctgcctgcctcggcctccc-aaagtgctgggatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884230 92 - 123690457 tagagat-agggtttcaccatgctggccaggctggtctcgaactcctggcctcaggtgatctgcccacctcggcctccc-aaagtgctgggatt i nomLeu3.chr11 C 0 I 5 s calJac3.chr2 204144037 94 + 204313951 tagagacaggggtttcaccatgttggccacggcggtctcaaactgctgacctcaggtgacctgcccgcctcagcctcccaaaagtgctgggatt i calJac3.chr2 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933855 59 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=409.000000 s hg38.chr3_KI270937v1_alt 104943 7 + 165607 tgggagg s ponAbe2.chr3 2433523 5 - 202140232 --gcagg i ponAbe2.chr3 C 0 I 8 s nomLeu3.chr11 2884327 7 - 123690457 tgtgagc i nomLeu3.chr11 I 5 I 1 s calJac3.chr2 204144131 5 + 204313951 --acagg i calJac3.chr2 C 0 I 8 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933855 59 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I e panTro4.chr3_GL389630_random 78573 13 - 103936 I a score=4331.000000 s hg38.chr3_KI270937v1_alt 104950 10 + 165607 attttccctt s panTro4.chr3_GL389630_random 78586 10 - 103936 accatacctg i panTro4.chr3_GL389630_random I 13 C 0 s ponAbe2.chr3 2433536 10 - 202140232 accatacctg i ponAbe2.chr3 I 8 C 0 s nomLeu3.chr11 2884335 10 - 123690457 accgcacctg i nomLeu3.chr11 I 1 C 0 s calJac3.chr2 204144144 10 + 204313951 accactcctg i calJac3.chr2 I 8 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933855 59 + 42124431 I e rheMac3.chr6 180462728 2536 - 180491593 I a score=34062.000000 s hg38.chr3_KI270937v1_alt 104960 29 + 165607 gccagaaaaatcttagttttagcattaac s panTro4.chr3_GL389630_random 78596 29 - 103936 gccagaaatatcttcattttagcattaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433546 29 - 202140232 gccAGAAAAATCTTAGTTTTAGCATTAAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884345 29 - 123690457 gccagaaaaatcttagttttagcattaac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180465264 27 - 180491593 gccAGAAAAATCT--GTTTTAGcattaac i rheMac3.chr6 I 2536 C 0 s calJac3.chr2 204144154 29 + 204313951 gccAGAAAAATCTTACTTTTAGCATTAAC i calJac3.chr2 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11933855 59 + 42124431 I a score=438329.000000 s hg38.chr3_KI270937v1_alt 104989 372 + 165607 ataattagttatttgctttaactcccaccccacataatttcaaaggattaatacctataagacgagtaac--ggagatgattgattgaaatttagga---ttcagtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctagcgatcctctgatgacacatgaagtaataggctgc----gtgactgtcaccagcctgatgtgcagttgggctGCAGAACCCCGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGACTCAAACTCGATTCTGACACCACCAGCACCCGGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGCAGCATGTCCTGGAGCAG-GCCAGGGG s panTro4.chr3_GL389630_random 78625 372 - 103936 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccaataagacgagtaag--ggagatgattgattgaaatttagga---ttcagtggctctatttgtctttagactatgactcactaaatctgcacactt-gaagtgctgtgttctagcgatgctctgacgacacatgaagtaataggctgc----gtgactgtcaccagcctgatgtgcagttgggctGCAGAACCCTGTGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGACTCAAACTCGATTCTGACACCATCAGCACCCGGGACGCTGCCTAGGGGCTTTCCCTGGTGGCAGAAGCACGTCCTGGAGCAG-GCCAGGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433575 370 - 202140232 ATAATTAGTTATTAGCTTTAACTCCCACCCCACATAATTTCAAAGGATTAATACCAATAAGACAAGTAAC---AAGATGACTGATTGAAATTTAGGA---TTTAGTGGCTCTATTTGTCTTTAGACTATGGCTCACTAAATCTGCACACTT-GAAGTGCTGTGTTGTAGCAATGCTCTGACAACACATGAAATAATAGGCTGC----CTGACTGTCACCAGGCTGATGTGCAGTTGGGCTGCAGAAACCCGTGATGCTGCCTAGCCCAGCCAGCCCCATGTCACTCCTCAGACTCAAACTCGATTCTGACACCACCAGCACCTGGGACACTGCCTAGGGGC-TTCTCCGGTGGCAGGAGCACATCCTGGAGCAG-GCCAGGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884374 370 - 123690457 ataattagttattagctttaactcccaccccacataatttcaaaggattaattccaataagacaagtaacaaggagatgattgattgaaatttagga---tttagtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGCTCTGATGACACATG----AATAGGTGGC----GTGACTGTCACCAGCCTGATGTGCAGCTGGGCTGCAGAACCCCATGATGCTGCCTAGCCCAGCCAGCCCCAGGTCACTCCTCAGACTCAAACTCGATCCTGACACCACCAGCACCCAGGACGCTGCCTAGGGGCTTTCTCTGGTGGCAGGAGCACGTCCTGGAGCAG-GCCGGGGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180465291 363 - 180491593 ataattagttattagctttaactcccaccccacataatttcaaaggattaataccaataagacaagtaat--------gattgattgaaatttagga--tttcagtggctctatttgtctttagactatggctcactaaatctgcacactt-gaagtgctgtgttctaGCGATGTTCTGACGACACACG----AATAGGCTGT----GTGACTGTCACCAGCCTGATGTGCACTTGGGCTGCGGAAACCCATGATGCTGCCTAGCCCAGCCAGCCCCCGGTCACTCATCAGATTCCAACTGGATTCTGACACCACAAGCACCCGGGACGCTGCCTAGGAGCTTTCTCTGGTGGCAGGAGTACATCCTGGAGTAG-GCTGGGGG i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204144183 313 + 204313951 ATAATTAGTTATTAGCGTCAACTCCCACCACACGTAAGTTCAAAGGGTTAATACCAATAAGACAAGTAACAGTGAGATGATGGATTCAAATTTAGGA--TTTCAGTGG-----------------------CTCACTGAATTTGCACACTT-GAAGTGCTGTGTCCTG----------------AGATGAAATCACAGGCTGC----GTGACTGTCAGCAGCCTCCTGTGCAGCTGGGCTGCAGAAACCCGTGGTGCTGCCCGGCCCAGCCAGTGCCAGGGCACTCCTCAGACTCAAACTGGATTCTGACGCCAC-AGCACCCGGGATGCTACCTAGG-GCTTTCTCTGCTGGCAGGAGT----------------------G i calJac3.chr2 C 0 C 0 s canFam3.chr34 11933914 347 + 42124431 atactta-ttactagctttaacttacac--tacacaatttcaaagtatgaacaccaatatccctagtaacagtaagactgctga-tgaaacataggctttcttagtggtttcatttatccttaaa-----gtttactgaaactgtaaactcagaagttctatgttcta-----------atgccacttgaaatgacactctcctcttgtgacagtcacca-tttgatctgcagctgggttGCAGACACTC--GATGCTGCATGGTCTGGAACTCCCCCAG-CACTCACCAGACCTGTACC---TTCTTGCCCCA--AGCACCTGTGATTCTGCTCAGGGTCTCTCTCTGGTGGTAGTGGTA-------GAGTAGAGCCAGGAG i canFam3.chr34 I 59 I 1339 e mm10.chr13 74319377 2341 + 120421639 I a score=669388.000000 s hg38.chr3_KI270937v1_alt 105361 569 + 165607 TGCCCGGAATTGACCATCCTGAACCTGTGCAGCGTGGGCTGGTGAAGGAACGCACCAGCTCCCACAGTGAACACGGGCCCAGCTGTCCACATGAGACCCGGCTCCCGGACGCCCCATGCTGCCGCCTCTTTCCTGTCTCACCTCCCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTTGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttaaaaactt-agtttggtaatatgtaaaacacttacaatttcaaagtccaga-tattacttcagagtctatttcggtctcacttccaccactgacccctGTCCTCCACAGCAACCACTTTAGATTTTTATCTTTGTACTGTTTTAAGAAAAAGCAAATATATATTTGCATTATATTATATGTACTCTGCCCCTTATCAATAGGCGttcctcattcctccttctggtacggagttccccactgcacgaattaatgttcctaatcccttactgatggacattttgattgtttccagt s panTro4.chr3_GL389630_random 78997 568 - 103936 TGCCCGGAATTGACCATCCTGAACCTGTGCAGCGTGGGCTGGTGAAGGAACACACCAGCTCCCACAGTGAGCACGGGCCCAGCTGTCCACATGGGACCCGGCTCCCAGACGCCCCGTGCCGCCGCCTCTTTCCTGTCTCACCTCCCACTTCCCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagataccattctttcaattttagggactatcttaaaaactt-agtttggtaatatgtaaaacacttacaatttcaaagtccaga-tattacttcagagtctatttcggtctcacttccaccactgacccctgtcctccacagcaaccactttagatttttatctttgtactgttttaagaaaaagcaa-tatatatttgcatcatatgatatgcactctgccccttatcaataggcgttcctcattcctccttctggtacggagttccccactgcacgaattaatgttcctaatcccctactgatggatattttgattgtttccagt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2433945 569 - 202140232 TGCCTGGAATTGACCATCCTGAACCTGTGCAGCGTGGGCTGGTGAAGGAACACACCAGTTCCCACAGTGAGCATGGGACCAGCTGCCCACGTGGGACCTGGCTCCTGGATGCCCCATGCCTCCGCCTCTTTCTTGTCTCACCTCCCACTTCCCTTCAG-----CTCCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCGCC-TGTAGAATGCAATCCAAGGAATTTAGATTCATTCATTTCAGATACTATTCTTTCAATTTTAGGGACTATCTTAAAAACTTAAGTTTGGTAATATGTAAAACACTTACAATTTCAAAGTCCAGA-TATTACTTCAGAGTCCATTTCAGTCTCACTTCCACCACTGACCCCTGTCCTCCACAGCAACCACTTTAGATTTTTATCTTTGTACTGTTTTAAGAAAAAGCAAATATATATTTGCATTATATGATATGTACTCTGCCCCTTATCAAT-GGCcttcctcattcctccttctggtactgagttccccactgcacgaattaatgttcctaatcccctactgatggacattttgattgtttccagt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2884744 567 - 123690457 TGCCCGGAATTGACCGTCCTGAGCCTGTGGAGCGTGGGCTGGTGAAGGAACACACCAGCTCCCACAGTGAGCACAGGCCCAGCTGCCCACATGGGACCTGGCTC------ACCCCGTGCCGCCACCTCTTTCCTGTGTCACCTCCCGCTTCCCTTCAGCAGCCCTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGTTGGCACC-TGTAGAATGCAATCCAAGGAATAtagattcattcatttcagatactattctttcaattttagggactatcttaaaaactt-agtttggtaatatgtaaaacacttacaatttcaaagtccaga-tattacttcagagtctatttcggtctcacttccaccactgacccctgtcctccacagcaaccactttagttttttatctttgtactgttttaagaaaaagcaaatatatatttgcattatattatatgcactctg-cccttatcaataggcattcctcattcctctttctggtactgagttctccactgtacgaattaatgttcctaatcccctactgatggacattttgattgtttccagt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180465654 569 - 180491593 TGCCTGGAATTGACCGTCCTGAACCTGTGGAGCGTTGGCTGGTGAAGGAACGCACCAGCTCCCACAGTGAGCACGGGCCCAGCTGCCCTTGTGGGACCTGGCTCCTGGACGCCCCACGACACCACCTCTTTCCTGTCCCACCTCCTGCTTCCCTTCAG-----CTAGTGCTCAGGGCCACCTTCCAAATTTTGATCTCAGGGTTGGTGCC-TGTAGAATGCAATCCAAGGAATttagattcattcatttcagatactattctttcaattttagggactatcttaaaaactt-agtttggtaatatgtaaaacatttaaaatttcaaggtccagg-tattacttcagagtctatttcagtctcacttccaccactgacccctgtcctccacagcaaccactttagttttctatctttgtactgttttaagaaaaagcaaatacatatttgcattatattatatGTACTCTGCTCCTTATCAATaggccttcctcattcctctttctggtactgagttccccactgtgcaaattaatgttcctaatcccctactgatggacattttgattgtttccggt i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204144496 558 + 204313951 TGCCCGGAATTGACTCTCCTGAACCTGTGGAGCGTGGGCTGGTGAAAGAACGCACCAACACCCACAGTGAGCACGGGCCCAGCTGCCCATGAGGGACCCGGCTCCCAGACGCCCTGTGCCACCTCCTCTTTCCTGTCTCACCTCCCA-TTCTCTTCAG-----CTGCTGCTCAGGGCCACCTTCCAAATTTTGGTCTCAGGGCTGATGCCTTGTAGAATGCAATGCAAGGCCATTAGATTCATTTATTTCAGATTCCATTTTTTCAATTTTAGAGACTACCTTAAAAACTT-AGTTTGGTAGTAAGTAAAACATTTACAATTTCAAAGTCCAAAGTATTACTTCAGAATCGATTTCAGTTTTTCTT-CACCACAGACCCC-ATCCCCTACAGCAACCACACTA-------ATCTTTCTGCTGTTTTAAGAAAAAGCAAATATATATTTGCATTATATCATAGGTACTCTGCCCCTCCTCa---ggccttcctcattccttcttcctgtactgagttactcactgtgggagttaatgttcctaatccccgactgacggacgtttgtattgtttccagt i calJac3.chr2 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I a score=788041.000000 s hg38.chr3_KI270937v1_alt 105930 297 + 165607 ----------tttacaaatgccacagtgaagaactttgtggcaaacacattcaggctgtgaaaagaactctgtggataaagtcctttcatttctttgccagagtttttttt-gaggcagat-tctagaattgctgagtctaagggcaaatgccatgtcgttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccacagtgacgtatgagagtccttgta-ccccacagcttcataaacaaagcatgacagcaaacctgcacgtttacccatcacacagttgagaaatttta s panTro4.chr3_GL389630_random 79565 298 - 103936 ----------tttacaaacgccacagtgaataactttgtggcaaacacattcaggctgtgaaaagaactctgtgggtaaagtcctttcatttctttgccagagtttttttttgaggcagat-tctagaattgctgagtctaagggcaaatgccatgtagttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccgcagtgacgtatgagagtccttgta-ccccacagcttcataaccaaagcatgacagccaacctgcacgtttacccatcacacagttgagaaatttta i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2434514 297 - 202140232 ----------tttacaaaggccacagtgaagaactttgttgcaaacacattcaggctgtgaaaagaactctgtgtgtaaactcctttcatttctttgccagagtttttttt-gaggcagat-tctagaattgctgagtcaaagggcaaatgccaggtagttttgttagacgctgccaaatcctcctccatgaggctgcaacgttctgcattccacagtgacgtatgagagtccctgta-acccacagcttcacaaacaaagcatgacagcaaacccgcacgtttacccatcacacagttgagaaatttta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2885311 296 - 123690457 ----------tttacaaatgccacagttaagaactttgttgcaaacacattcaggctgtgaaaagaactctgtgcgtaaagtcctttcatttctttgccagagttttttt--gaggaagat-tctagaattgctgagtcaaagggcaaatgccatgtagttttgttagatgctgccaaatcctcttccatgaggctgcaacgttctgcattccacagtgacgtatgagagtccttgta-ccacacagcttcataaacaaagcatgacagcaaacctacacgtttacccatcatacagttgagaaatttta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180466223 294 - 180491593 ----------tttacaaatgccacagtgaagaacttggttgcaaacacattcaggctgtcaaaagaactctgtgcataaagtcctttcatttcttttcc--agttttttt--gatgcagat-tccagaattgctgagtcaaagggcaaatgctacatactttcgttagacgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgaggtatgagagtccttgta-ccccacagcttcataaacaaagcatgatggcaaacctgcacgtttaccaatcacacaggtaagaaatttca i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1286936 296 + 181584905 ----------TTTACAAACGCCACAGTGAAGAAGTTTGTTGTAAACACATTCAGACTGTGAAaagaactctgtgcgtaaagtcctttcatttctttgccagagttttttt--gaggcagat-tctagaattgctgagtcaaacggcaaatgccacatagttttgttagatgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgaggtatgagagtccttgta-ccccacagcttcataaacaaagcatgatggcaaacctgcacgtttaccaatcacacaggtaagaaatttca i macFas5.chr6 N 0 C 0 s papAnu2.chr6 1257345 295 + 174439528 ----------tTTACAAATGCCACAGTGAAGAAGTTTGTTGTAAACACATTCAGACTGTGAAAAGAACTCTGTGCGTAaagtcctttcatttcttttcc--agttttttt--gaTGCAGAT-TccagaattgctgagtcaaacgGCAAATGCTACATACTTTCGTTAGACGCTGCCAAATCCTCTTCCACGAGGCTGCAACGTTCTGCATTCCACAGTGAGGTGTGAGAGTCCTTGTACCCCCACAGCTTCACAAACAAAGCATGACGTCAAACCTGCACGTTTACCAATCACACAGGTAAGACATTTCA i papAnu2.chr6 N 0 C 0 s chlSab2.chr4 1381046 296 + 91010382 ----------TTTACAAATGCCACAGTGAAGAGCTTTGTTGTAAACACATTCAGgctgtgaaaagaactctgtgcgtaaagtcctttcatttctttgccagagttttttt--gaggcagat-tctagaattgctgagtcaaagggcaaatgccacatactttcgttagacgctgccaaatcctcttccacgaggctgcaacgttctgcattccacagtgacgtacgagaatccttgta-ccccacagcttcataaacaaaacatgatggcaaacctgcacgtttaccaatcacacaggtaagaaatttca i chlSab2.chr4 N 0 C 0 s calJac3.chr2 204145054 282 + 204313951 attattccggttcttcaatgccacggtgaagaactttgt--cagacacactcaggccgtgagaagg-----------------ctttcatttctccgccagagtgtctta--gagacagatccctagaattgttaagtcaaagagcaaatgccatgcagct--gtcagatgctgacaaatcctcttccctgaggccgcagcattctgcactccacaccggtgt----gagtccttgta-ccctacatcttcacaaacgaagcctgacagcaaacctgcctgtttaccagtcacacgggtgagacacttta i calJac3.chr2 C 0 C 0 e mm10.chr13 74319377 2341 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I a score=806671.000000 s hg38.chr3_KI270937v1_alt 106227 290 + 165607 t-ctACTTTCACCTTTTTTTT-TGGTTAGCATTTTTATTCCCAGC--T-TTTTTGTGGTATAATGCGCAGAAGGTAATGAACACA--TTCTAC---CTGCaagcttcttcctgtgcctttggaatctgctcctgcc------agtctgcagggaaccacggatctgctttc------cgtcacgtaggaggcattctcgacaccctctgtacacagcatgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcgtgcgccaacagtccactccttcctagtgctga s panTro4.chr3_GL389630_random 79863 289 - 103936 t-ctACTTTCACCTTTTTTTT--GGTTAGCATTTTTATTCCCAGC--T-TTTCTGTGGTGTAATGTGCAGAAGGTAATGAACACA--TTCTAC---CTGCaagcttcttcctgtgcctttggaatctgctcctgcc------agtctgcagggaaccacggatctgctttc------cgtcacgtaggacacattctcgacaccctctgtacacagcatgcgc----tttatttggcttctcttacgcagc---------gtagtgac--tttcagatttattcaagctgctgcgtgcgccaacagtccactccttcctagtgctga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2434811 295 - 202140232 tcctaatTTCACCTTTTTTTTTTGGTTAGCATTTTTATTACCAGC--T-TTTTTGTGGTATAATGCGCAGAAGGTAATGAACACA--TTCTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAATCTGCTCCTGCC------GGTCTGCAgggaaccacggatctgctttc------cgtcacgtaggaggcattctcaacaccctctgtacacagcatgaact-tttttatttggcttctcttacgcagt---------gtagtgac--tttcagatttattcaagctgctacatgcgccaatagtccactccttcctagtgctga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2885607 295 - 123690457 tcctggtttcaccttgttttt-tggttagcattttaattaccagC--T-TTTTTGTGGTGGAATGCACAGAAGGTAATGAACACA--TTCTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAATCTGCTCTTGCC------AGTCTGCAAGGAAGCATGGatctgctttc------tgtcacgcaggaggcattctcgacaccctctatacacagcatgcgct-tttttatttggcttctcttacgcagc---------gtggtgactgtttcagatttattcaagctgctgcgtgtgccaatagtccactcctt-ctagtgctga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180466517 294 - 180491593 tcctagtttcacc--aatttt-tggttagcatttttattaccagcTTT-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACA--TTCTAC---CTGCaagcttcttcctgtgcctttggaatctgctcctgcc------agtctgcagggaaccacggatctgctttc------tgtcacacaggaggcattctcgacaccctctgtacacagcatgcact-tttttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1287232 293 + 181584905 tcctagtttcacctttttttt-tggttagcatttttattaCCAGC--T-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACA--TTCTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAATCTGCTCCTGcc------agtctgca-ggaaccacggatctgctttc------tgtcacacaggaggcattctcgacaccctctgtacacagcatgcact-tttttatttggcttctcttacgcagc---------atagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1257640 291 + 174439528 TCCTAGTTTCACC--AATTTT-TGGTTAGCATTTTTATTACCAGC--t-tttttttGGTGTAATGCACAGAAGGTGATGAACACA--TTCTAC---CTGCAAGCTTCTTCCTGTGCCTTTGGAATCTGCTCCTGCC------AGTCTGCA-GGGACCACGGATCTGCTTTC------CGTCACACAGGAGGCACTCTCGACACCCTCTGTACACAGCGTGCACT-TTTTTATTTGGCTTCTCTTATGCAGC---------ATAGTGAC--TTTCAGATTTATTCAAGCTGCTGCATGTGCCAACAGTCCACTCCCTCCTAGTGCTGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1381342 305 + 91010382 tcctagtttcacc-ttttttt-tggttagcatttttattaCCAGC--T-TTTTTTTGGTGTAATGCACAGAAGGTAATGAACACA--TTCTACCTGCTGCAAGCTTCTTCCTGTGCCTTAAGAATCTGCTCCTGcc------agtctgcagggaaccacagatctgccttc------cgtcacacaggaggcattctcgacaccctctgtacacagcatgcact-tttttatttggcttctcttacgcagcatagtgactatagtgac--tttcagatttattcaagctgctgcatgtgccaacagtccactccttcctagtgctga i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204145336 275 + 204313951 tcctagtttcgccttttttctttggttagcatttttattaCCAGC--TCTTTTTGTGGTATAATGTGCAGAAGGGATTGAACACA--TTCTAC---CCGCAAGCTTCTTCCTGTGCCTTTGGAATCTGCTCCTGCC------ACTCTGCAGGGAACCGTG--TCGACACTG------TG-CACGt-ggagtc------------------acacagcctatactctttttatttggcttctctaactcagt---------gtagtgac--tttcagattgatccaagctgctgtgtgtgccaatagtgcattccttcccagtgctga i calJac3.chr2 C 0 C 0 s mm10.chr13 74321718 294 + 120421639 -tctctttcctcctcttcttc-ctcctcttccttctTTTTTAAGT--T----TTGAGGTATAATTAGCAGAAAATAACAAACATAATTATCAC---ATAAAGCTTTCCTCCTA-ATCTTAGGGACCTCTTCCTCCTTTTCCAAATCTGCATAGAGCTActgatcttctgttattacatgtcagttagcagt--ttctagacttcaagtgcaatcagtgtgtacc-ttcttgact------tcttacccttg---------tcaatagc--attgagattcatccatgctgctgtgtataccaa-agcccgtccttttctagtagtga i mm10.chr13 I 2341 I 696 e canFam3.chr34 11934261 1339 + 42124431 I a score=1110042.000000 s hg38.chr3_KI270937v1_alt 106517 436 + 165607 gG--CCCCCATCACATGAGCACAAC---TGTTTCTTG---TGTGTGATGTGTTGTCCTCTGGCTGTGCACTGCCAAAAAAGACATCATT-------------AAAAAAAATTTAAATATAATGTAAGACCTGCCTTGTCTTAGGAAACGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgggacca--------------------------------------------------------gcctgggcaagagggtgaaaccctgtctc-------------taaaaattagcca------------------------------------------ggcatggtggctcacacctgtagtctcagctcttagggaggctgaggtgggaggactgctggagcccaggaggtggaggctgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctcgacc----aagaaaaaaa--caaaaaaTTAACAGAAGGAAAAA s panTro4.chr3_GL389630_random 80152 436 - 103936 gG--CCCCCATCACATGAGCACAAC---TGTTTCTTG---TGTGTGATGTGTTGTTCTCTGGCTGTGCACTGCCAAAAAAGACATCatt-------------aaaaaaaatttaaatataatGTAAGACCTGCCTTGTCTTAGGAAACGTTTTTCTGgcagtggctcacacctataatcccaatactctggcaggctgaggcaggaggactgcttgagcccaagagtttgggacca--------------------------------------------------------gcctgggcaagatggtgaaaccctgtctc-------------taaaaattagcca------------------------------------------ggcatggtggctcacacctgtagtctcagctcttagggaggttgaggtgggaggactgctggagcccgggaggtggaggctgcagtgagccgagatcacatcactgcactccagcctgggcagcatggcaagactctgtctctacc----aagaaaaaaa--caaaaaaTTAACAGAAGGAAAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2435106 437 - 202140232 gG--CCCCCATCACATGAGCACAAC---TGTTTCCTG---TGTGTGATGTGTTGTTCTCTGGCTGTGCACTGCCAAAAAAGACATCATT------------AAAAAAAAATCTAAATATAATGTAAACCCTGCCTTATCTTAAGAAAAGTTTTTCTGgcagtggctcacacctataatcccaatattctgggaggctgaggcaggaggactccttgagcccaggagtttgagacca--------------------------------------------------------gcctgggcaagatggtgaaaccctgtctc-------------taaaaattagcca------------------------------------------ggcatggcggctcacacctgtagtctcagctcctagggaggctgaggtgggaggattgctggagcccgggaggtggaggttgcagtgagccgagatcacaccactgcactccagcctggacagcatggcaagactctgtctctacc----aagaaaaaaa--caaaaaaTTAAATGAAGGAAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2885902 439 - 123690457 gG--CCCCCATCACATGAGCACAAC---TGTTTCCTG---TGTGTGATGTGTTGTTCTCTGGCTGTGCACTGCCAAAAAAGACATCATT----------TAAAAAAAAAATCTAAATATAATGTAAAACCTGCCTTGCCTTAGGAAAAGTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggag-ttgagacca--------------------------------------------------------gcctgggcaagatggtgaaaccctgtctc-------------taaaaattagcca------------------------------------------ggcatgatggctcacgcctgtagtctcagctcctagggaggttgaggtggga-gattgctggagcccgggaggtggaggctgcagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctacc----aagaaaaaaaaccaaaaaaCTAATAGAAGGAAAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180466811 468 - 180491593 gG---CCCCATCACATAAGCACAAC---TATTTCCTG---TGTGTGATGTGTTATTCTCTGGCTGTACACTGCCAAAAAAGACATCattaaaa------aaaaaaaaaaatctaaatataatGTAAAACCTGCCTTGCCTTAGGAAA-GTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------tccttgggaggcagaggctggaggattgctggagcccgggcggtggaggttgtagtgagccgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctacc----aagaaaaaaa-ccaaaaaaTTAATAGAAGGAAAAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1287525 448 + 181584905 gG---CCCCATCACATAAGCACAAC---TGTTTCCTC---TGCGTGATGTGTTGTTCTCTAGCTGTGCACTGCCAAAAAAGATATCATT------------AAAAAAAAATCTAAATATAATGTAAAACCTGCCTTGCCTTAGGAAA-GTTTTTCTGgcagcggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggagtttgagctca--------------------------------------------------------gcctgggcgagatggtgaaaccccatctctgta-aaaaaatataaaaattagcca------------------------------------------ggcatagtggctcacacctgtagtctcagctccttgggaggcggaggctggaggattgctggagcccgggaagtggaggttgtagtgagctgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctacc----aagaaaaaaa-ccaaaaaaTTAATAGAAGGACAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1257931 453 + 174439528 GG---CCCCATCACATAAGCACAAC---TGTTTTCTC---TGTGTGATGTGTTGTTCTCTAGCTGTGCACTGCCAAAaaagatatcatt-----------aaaaaaaaaatctaaatataatgTAAAACCTGCCTTGCCTTAGGAAA-GTTTTTctggcagtggctcacacccataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggaatttgagatca--------------------------------------------------------gcctgggcaagatggtgaaacccagtctctata-aaaaaatataaaaattagcca------------------------------------------ggcatggtggctcacacctgtagtctcagctccttgggaggctgaggcgggaggactgctggagcccgggcggtggaggttgtagtgagctgagatcacaccactgcactccagcctgggcagcatggcaagactctgtctctaccaaaaaaaaaaaaaa-acaaaaaattaatagaagGACAAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1381647 450 + 91010382 gG---CCCCATCACATAAGCACAAC---TGTTTCCTC---TGCGTGATGTGTTGTTCTCTAGCTGTGCACTGCCAAAAAAGATATCATT---A------AAAAAAAAAAATCTAAATATAATGTAAAACCTGCCTTGCCTTAGGAAA-GTTTTTCTGgcagtggctcacacctataatcccaatactctgggaggctgaggcaggaggactgcttgagcccaggaatttgagatca--------------------------------------------------------gcctgggcaagatggtgaaacccagtctctata-aaaaaatataaaaattagcca------------------------------------------ggcatggtggctcacacctgtagtctcagctccttgggaggctgaggtgggaggattgctggagcctgggaagtggaggttgtagtgagctgagatcacaccactgcactccagcctgggcagcatgacaagactctgtctctacc----aag-aaaaaa-ccaaaaaaTTAATAGAAGGACAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204145611 446 + 204313951 ggagtgcccatcacgtgggcacagcacaactttcctgtcttctgtggtgaggggTTCTC-AGCTGTGCACTGCGAAAAAAGACTTCATTCAAAACACACACAAAAAAAGAGCTAAATATAATGTAAAACCTGCCTTGTCTTAGGAAAAGGTTTTCTGgcagcggctcacacctataatcccaacactttgggaggctga---aggaggactgcttgagcccaggagtttaagacca--------------------------------------------------------gcctggtcaagatggtgaaaccccatctc--tacaaaacatataaaaattagcca------------------------------------------ggcatggtggctcatgcctgtagtctcagctcc-------------gtgggaggactgctggagcccaggaggtggaggttgcagtgagctgagatcacagcactgctctccagcctgggcagcatggcaagaacccatctctacc----aagaaaaaaa-------aattaatagaagaaaaaa i calJac3.chr2 C 0 I 360 e mm10.chr13 74322012 696 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I a score=17859.000000 s hg38.chr3_KI270937v1_alt 106953 9 + 165607 CAAAACGGC s panTro4.chr3_GL389630_random 80588 9 - 103936 CAAAAGGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2435543 9 - 202140232 CAAAAGGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2886341 9 - 123690457 CAAAAGGTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467279 9 - 180491593 CAAAAGGTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1287973 9 + 181584905 CAAAAGGTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258384 9 + 174439528 CAAAAGgtt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382097 9 + 91010382 CAAAAGGTT i chlSab2.chr4 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146057 360 + 204313951 I e canFam3.chr34 11934261 1339 + 42124431 I a score=749469.000000 s hg38.chr3_KI270937v1_alt 106962 257 + 165607 TTTCTTATCAAAAATACACTTTAAG-AACAAATTTATAATAttaagttgctgcaaaagtaattgtgccttttaccattgaaagcaatggcaaatactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTGTCATTGCTCTCTAAAAAGAACAGCCTAAAAATAAAGCAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAACcggcagtccctaacc s panTro4.chr3_GL389630_random 80597 258 - 103936 TTTCTTATCAAAAATACACTTTAAGGAACAAATTTATAATAttaagttgctgcaaaagtaattgtgccttttaccattgaaagcaatggcaaaaactgcaattacttttgctccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTGTCATTGTTCTCTAAAAAGAACAGCCTAAAAATAAAGCAGCAGCCCA-TTTACCTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAACTGgcagtccctaacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2435552 256 - 202140232 TTTCTTATCAAAAATACACTTTAAGGAACAAATGTATCATAttaagttggtgcaaaagtaattgtggcttttaccattgaaagcaatagcaaaaaccgcaattacttttgctccaacctaaTATTATTTTCTAATGAC--ACTTGGAAATAACTGTCATTGTTCTCTAAAAACAACAGCCTAAAAATAAAGCAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAACTGgcgatccctaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2886350 258 - 123690457 TTTCTTACCAATAATACACTTTAAGGAACAAATTTATCATAttaaggtggtgcaaaagtaattgtggcttttaccattgaaagcaatgacaaaaaccgcaattacttttgcaccaacctaaTATTATTTTCTAATGACAAACTTGGAAATAACTGTCATTGTTCTCTAAAAACAACAGCCTAAAAATAAAGTAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGCATTTGGTTATTTAAACTGgcggtccctaacc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467288 258 - 180491593 TTTCTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaagtaa-tgtggcttttaccattgaaagtaatggcaaaaactgcaattacttttgcaccaacctaaTATTATTTTCTAATGACGAACTTGGAAATAATTGTCATTATTCTCTAAAAAGAACAGTCTAAAAATAAAGCAGCAGCCCATTTTACTTCTACGCCAGTTCTTTTAGTATTTGGCTATTTAAACTGgcggtccctaacc i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1287982 254 + 181584905 TTTCTTACCAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaat----tgtggcttttaccactgaaagtaatggccaaaactgcaattacttttgcaccaacctaaTACTATTTTCTAATGACAAACTTGGAAATAATTGTCATTGTTCTCTAAAAAGAACAGCCTAAAAATAAAGAAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGTATTTGGTTATTTAAACTGGCGGTCCCTAACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258393 254 + 174439528 tttcttaccaaaaatacaCTTTAAGGAACAAATTTAtcatattaagttggtgcaaaat----tGTGGCTTTTACCACTGAAAGTAATggccaaaactgcaattacttttgcaccaacctaatattattttctaatgacAAACTTGGAAATAATTGTCATTGTTCTCTAAAAAGAACAGcctaaaaataaagaagcagcCCA-TTTACTTCTATGCCAGTTCTTTTAGTATTTGGTTATTTAAACTGGCGGTCCCTAACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382106 254 + 91010382 TTTCTTACAAAAAATACACTTTAAGGAACAAATTTATCATAttaagttggtgcaaaat----tgtggcttttaccactgaaagtaatggccaaaactgcaattacttttgcaccaccctaaTATTATTTTCTAATGACAAACTTGGAAATAATTGTCATTGTTCTCTAAAAAGAACAGCCTAAAAATAAAGAAGCAGCCCA-TTTACTTCTATGCCAGTTCTTTTAGTATTTGGTTATTTAAACTGGCGGTCCCTAACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204146417 258 + 204313951 TTCCTTACCAAAAATACACTTTAAGGAACAAATTTATAATAttaagttagtgcaaaagtaattgtggcttttaccattgaaagtaatggcaaaaaccgcaattacttttgcaccaacttaaAATTATTTTCTAATGACAAACTTGGAAGTACCTGTCATTGTTCTATAAATAGAACAGCCCAAAAATAAAGCAGCAGCCCA-TTTACTTCTACTTCAGTTCCTTTAGTATTTGGTGACTTAGACcagtggtccctaacc i calJac3.chr2 I 360 C 0 e mm10.chr13 74322012 696 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I a score=221453.000000 s hg38.chr3_KI270937v1_alt 107219 197 + 165607 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gt-------ggggatggtttggagatgaaacggttccatctcagatcatcagtattagattctcataagcggggcataacctagatccttctcatgcgcagttcacaacaggattc-cactcctatgagaatctaatgccaccactgatctga s panTro4.chr3_GL389630_random 80855 197 - 103936 tttttggcaccagggactggtttcacggaagacactttttccactgacaagt---------gt-------ggggatcgtttggagatgaaacggttccatctcagatcatcagtattagattctcataagcgggacataacctagatccttcgcatgcgcagttcacaacagggttc-cactcctatgagaatctaatgccaccactgatctga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2435808 195 - 202140232 tttttggcaccagggactggtttcatggaagtcactttttccactgacaagt---------gt-------gggaatggtttggagatgaaacggttccacctcagatcatccgcattagattctcctaagtggggcataacctagatccttcgcatgcacagttcacaatagggttc-cactcctc--agaatctaatgccaccactgatctga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2886608 197 - 123690457 tttttggtaccagggactggtttcatggaagacactttttccacggacaagt---------gt-------ggggatggtttggagatgaaacggttccacctcagatcagcagcattagattctcataagcagcgcataacctagacccttggcatgcacagttcacaatagggttc-cactcctatgagaatctaatgccaccactgacctga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467546 206 - 180491593 gttttggcaccagggactggtttcacggaacacactttttccatggacaagtgtggggatggt-------ggggatggtctggagatgaaacggttccacctcagatcatgagcattaaattctcaaaagcggcgcataacctagatccttcgcatgcgcagttcacaacagggttc-cactcctatgagaatctaatgccaccactgatctga i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204146675 194 + 204313951 tttctggcaccagggactggtttcatggaagacactttttccagggacaagt---------gtggggatgggggatggtttggggacgaaacggttccacctcagatcatcggcattagactc-----------gcataacccagatccctcgaatgtgcagttcacagtagggtttgtgctcccaggagaatctaatgccaccgctgatctga i calJac3.chr2 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=3910.000000 s hg38.chr3_KI270937v1_alt 107416 4 + 165607 cagg s panTro4.chr3_GL389630_random 81052 4 - 103936 cagg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436003 4 - 202140232 cagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2886805 4 - 123690457 cagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467752 4 - 180491593 cagg i rheMac3.chr6 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=53501.000000 s hg38.chr3_KI270937v1_alt 107420 150 + 165607 aggcggagctcacacagcaatgATATGACAGGGG---------------------------------------------------------CGGAGCT--CACAATAATGATATGACAGGGGGCGGAGCTCACACAGTAATGATATGACAGGGGGCGGAGCTCACACAGTA-----ATGACA----GGGGGCGGAGCTCACACAGTAATGA--TGACAGC s panTro4.chr3_GL389630_random 81056 209 - 103936 aggcggagctcacacagcaatgATATGACAGGGGGCAGAGCTCACACAGAAATGAGGACGGGGCAGAGCTCAGTAATGCTCTGACAGGGGGCGGAGCT--CACAGTAATGAT--GACAGGGGGCGGAGCTCACACAGTAATGATAAGACAGGGGGCAGAGCTCACACAGTA-----ATGACATGACAGGGGCGGAGCTCACACAGTAATGA--CGACAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2886809 150 - 123690457 aggcggagctcacacagtaatgatctgacagggg--------------------------------------------------------gcggagctcacacagtaatgATCTGACA-GGGGCGGGG--CACACAGTAATGCT--GACAGGGGGCGGAGCTCACACAGTAATG--ATGACA----GGAGGCGGAGCTCAGACAGTAATGA--TGACAG- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467756 159 - 180491593 aggcggagctcacacagtaatgatcTGACGGAGG---------------------------------------------------------CGGGGCTCACACAGTAAtgatctgacaggaggcggagctcacacagtaatgatctgacaggaggcggagctcacacagtaatgatctgaca----ggaggaggagctcacacagtaatgatctgacagg i rheMac3.chr6 C 0 C 0 e ponAbe2.chr3 2436007 0 - 202140232 C e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=145310.000000 s hg38.chr3_KI270937v1_alt 107570 208 + 165607 GGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGA--TGACAGGGGGCGGAGCTCACACAGTAATGA--TGACAGGGGGCAGAGCTCACA--GTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGA---------------------------GCTCACACAGTAATG s panTro4.chr3_GL389630_random 81265 214 - 103936 GGGCAGAGCTCACACAGTAATGATCTGGCAGGGGGTGGAGCTCACACAGTAATGATATGGCAGGGGGCGGAGCTCACACAGTAATGCCCTGGCAGGGGGCGGAGCTCACACAGTAATGCCCTGGCAGGGGGCGGAGCTCACACAGTAATGCCCTGGCAGGGGGCGGAGCTCACACAGTAATGCCCTGGCAGGGGGCGGA---------------------------GCTCACACAGTAATG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436007 236 - 202140232 gggcggagctcacacagtaatgatcTGACAGGGGGCGGAGCTCACACAGTAAtgatctgacaaggggcggagctcacacagtaatga--tgacagggagcggAGCTCACACACTAATGTTCTGGCAGGGGACAGAGCTCACA--GTAACGCTCTGGCA-GAGGCGGACCTCACACAGTAATGCTCTGGAAGGGGGCGGAGCTCAGTAATGATCTCATGGGGGCGGGGCTCACACAGTAATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2886959 210 - 123690457 GGGCGGAGCTCACACAGTAAtgatctgacagggggcggagctcagacagtaatgATTTGACAGGGGGCAGAGCT--CACAGTAAtgatctgacaggaggcggagctcagacagtaatgc--tgacagggggcggAGCTCACACAGTAAtgatctgacagggggcggaactcagacagtaatgatttgacagggggcgga---------------------------gctcacacagtaatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180467915 210 - 180491593 aggcggagctcacacagtaatgatcTGAC-GGGGGCGGGGCTCACACAGTAAtgatctgacaggaggaggagctcacacagtaatgatcTGAC-GGAGGCGGGGCTCACACAGTAATGATCTGAC-GGGGGCGGGGCTCACACAGTAAtgatctgacaggaggaggagctcacacagtaatgatcTGAC-GGGGGCGGG---------------------------GCTCACACAGTAAtg i rheMac3.chr6 C 0 I 161 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=13435.000000 s hg38.chr3_KI270937v1_alt 107778 27 + 165607 C--TGAC-GGGGGTGGAGCTCACACAGTAA s panTro4.chr3_GL389630_random 81479 28 - 103936 A--TGACAGGGGGCGGAGCTCACACAGTAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436243 25 - 202140232 A--TGAC-GGGGGCGGGGCT--CACAGTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2887169 30 - 123690457 atctgacaggaggcagagctcagacagtaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468286 28 - 180491593 --ctgacaggaggaggagctcacacagtaa i rheMac3.chr6 I 161 C 0 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=111610.000000 s hg38.chr3_KI270937v1_alt 107805 284 + 165607 TGCT--GACAGGGGGTGGAGCTCACACAGTAATACTCTGGCAGGGGGCGGAGCTCACACAGCAAtgctctgacagggggcagagctcacacagtaatgctcTGGCAGGGGGCGGAGCTCACACAGTAATGCC---GACGGGGGTGGAGCTCACACAGTAATGCT--GACAGGGGGTGGAGCTCACACAGTAATACTCTGGCAGGGGGCGGAGCTCACACAGCAATGCTCTGAC--GGGGCAGAGCTCACACAGTAATACTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTC s panTro4.chr3_GL389630_random 81507 293 - 103936 TGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGCGCTCACACAGTAATGCTCTGGCAGGGGGCGGCGCTCACACAGTAATGCCCTGGCAGGGGGCGGAGCTCACACAGTAATGCCCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTC i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2887199 254 - 123690457 tgct--GACAGAAGGCGGAGCTCACACAGTAATGATCTGAC--GGGGCGGAGCTCAGACAGTAATGATTTGACAGGGGGCGTAGCTCACACAGTAAtgatctgacaggaggcagagctcagacagtaatgct----------------------------------gacaggaggcggAGCTCACACAGTAAtgatctgacagggggcggagctcagacagtaatgatttgacagggggcggagctcacacagtaatgatctgacaggaggcagagctcacacagtaatgct- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468314 289 - 180491593 tgatctgacaggaggaggagctcacacagtaatgatcTGAC-GGAGGCGGGGCTCACACAGTAAtgatctgacaggaggcggagctcacacagtaatgatcTGAC-GGGGGCGGGGCTCACACAGTAATGAT-CTGACGGAGGCGGGGCTCACACAGTAAtgatctgacaggaggaggagctcacacagtaatgatctgacaggaggcggagctcacacagtaatgatcTGAC-GGAGGCGGGGCTCACACAGTAAtgatctgacaggaggcggagctcacacagtaatgatc i rheMac3.chr6 C 0 C 0 e ponAbe2.chr3 2436268 0 - 202140232 C e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=74939.000000 s hg38.chr3_KI270937v1_alt 108089 114 + 165607 TGACAGGGGGCGGAGCTCACACAGTAAT-CTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGCCAGGGGGCGGAGCTCACA------------------------------CAGTAATGCTCTGCCAGGGGGCGGAGCTCA s panTro4.chr3_GL389630_random 81800 145 - 103936 TGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436268 111 - 202140232 TGACAGGGGGCGGAGCTCACAC--TAATGTTCTGGCA-GAGGCGGAGCTCACACAGTAATGCTCTGGCA-GAGGCGGACCTCACA------------------------------CAGTAATGCTCTGGAAGGGGGCGGAGCTCA i ponAbe2.chr3 C 0 I 14 s nomLeu3.chr11 2887453 114 - 123690457 -GACAGGAGGTGGAGCTCACACAGTAAtgatctgacagggggcggagctcagacagtaatgatttgacaggaggcggagctcaca------------------------------cagtaatgatctgacaggaggcggagctca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468603 112 - 180491593 TGAC-GGGGGCGGGGCTCACACAGTAATGATCTGACG-GGGGCGGGGCTCACACAGTAAtgatctgacaggaggcggagctcaca------------------------------cagtaatgatcTGAC-GGGGGCGGGGCTCA i rheMac3.chr6 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=3055.000000 s hg38.chr3_KI270937v1_alt 108203 18 + 165607 CACAGTAAT-CTCTGGCAG s panTro4.chr3_GL389630_random 81945 19 - 103936 CACAGTAATGCTCTGGCAG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2887567 17 - 123690457 gacagtaat--gATGACAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468715 18 - 180491593 CACAGTAATGATCTGACG- i rheMac3.chr6 C 0 C 0 e ponAbe2.chr3 2436379 14 - 202140232 I e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=92215.000000 s hg38.chr3_KI270937v1_alt 108221 125 + 165607 GGGGCGGAGCTCACACAGTAAtgctctgacaggg------------------------------ggcggagctcacacagtaatgctcTGGCAGGGGGCGGAGCTCACACAGTAAtgctctggcagggggtggagctcacacagtaatgctctgg s panTro4.chr3_GL389630_random 81964 125 - 103936 GGGGCGGAGCTCACACAGTAATGCTCTGGCAGTG------------------------------GGCGGAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAAtgatctggcagggggcggagctcacacagtaatgctctgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436393 123 - 202140232 GGGGCGGGGCTCACACAGTAATG--ATGACAGGA------------------------------GGCGAAGCTCACACAGTAATGCTCTGGCAGGGGGCGGAGCTCACACAGTAAtgatctggcagggggcggagctcacacagtaatgctctgg i ponAbe2.chr3 I 14 C 0 s nomLeu3.chr11 2887584 122 - 123690457 -GGGCGGAGCTCACACAGTAAtgatctgacaggg------------------------------ggcggagctcagacagtaatgctctgacaggaggcggagctcagacaataataatctggctgggggtggagct--cacagtaatgctctga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468733 155 - 180491593 GGGGCGGGGCTCACACAGTAATGATCTGACGGGGGCGGGGCTCACACAGTAATGATCTGACGGAGGCGGGGCTCACACAGTAAtgatctgacaggaggaggagctcacacagtaatgatctgacagaaggtggagctcacagagtaatgctctgg i rheMac3.chr6 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e calJac3.chr2 204146869 0 + 204313951 C e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=546816.000000 s hg38.chr3_KI270937v1_alt 108346 460 + 165607 cagggggcggagctcacacagtaatgctcactggctggctgctcacctcctactgtgtggcctggttcctaacaggccatggactgg-aacaatctgtggcctggggattggggacccctgATTTAAAGAATCGAGGACACACTCACCTAGCAAACCATCTGCTAAGAAAAAAGGAGGAA-------------------------AAGCACCAACATTAATTTGAACTTAGAAATAAACTACAA---ggccagacatggtggttcacacctataattccagcacttcgggaggccaaggaggaacgatcacttaagcccagcagtttgagaccagcctaggcaacaaagtgagaccctgtccctacaattacaaaataaatgagctgggcgtggtggtgcacacctgtagccccagctacttagaaggctgagtcgggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc s panTro4.chr3_GL389630_random 82089 460 - 103936 cagggggcggagctcacacagtaatgctcactggccggctgctcacctcctactgtgtggcctggttcctaacaggccatggactggtaacaatctgtggcctggggattggggacccgtgATTTAAAGAATCGAGGACACAC----CTAGCAAACCATCTGCTAAGAAAAAAGGAGGAA-------------------------AAGCACAAACATTAATTTGAACTTAGAAATAAACTACAATAAggccagacatggtggttcacacctataattccagcacttcaggaggccaaggaggaacgatcacttgagcccagcagtttgagatcagcctaggcaacacagtgagaccctgtccctacaattacaaaataaatgagctgggcatggtggtgcacacctgtagccccagctactcagaaggctgagttgggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436516 459 - 202140232 cagggggcggagctcacacagtaatgctcactggccggctgctcacctcctactgtgtggcctggttcctaacaggccatggactggtaacaatctgtggcctggggattggggacccctgATTTAAATAATCGAGGACACACTCACCTAGTAAACCATCTGCCAAG-AAAAAGGAGGAA-------------------------AGGCACCAACATTAATTTGAACTTAGAAATAAACTACAA---ggccaggcatggtggtccacacctataattccggcacttcgggaggccaaggagggacgatcacttgagcccaggagtttgagaccagcctaggcaacacagtgagaccctgtccctacaattacaaaataaatgagctgggcgtggtggcaca-acctgtatccccaactactcagaaggctgagtcgggaagatcacctgagctgcccaggagtttgaggctgcagtgagctgagactgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2887706 463 - 123690457 cagggggctgaactcacacagtaatgctcactggccggctgctcacctcctactgtgtggcctggttcctaacaggccatggactggtaatgatctgtggcctggggattggggaccactgATTTAAATAATCAAGGACACACTCACCTAGTAAACCATCTGCCAAC-AAAAAGGAGGAA-------------------------AAGCATCAACATTAATTTGAACTTAGAAATAAACTACAACAAggccaaacatggtagttcacacctacaattccagcactttgggaggccaaggagggacgatcacttgagcccagcagtttgagaccagcctaggcaacacagtgagaccctgtccctacaattacaaaataaatgagctgggtgtggtggtgcacacctgtagccccaactactcagaaggctgagtcgggaagatcaccggagctgcccaggagtttgaggctgcagtgagctgagactgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180468888 488 - 180491593 cagggggcggagctcacacagtaatgttcactggccagctgcccaccccctactgtgcggcccggttcctaacaggccatggagtggtaccaatttgtggcctggggattggggacccctgATTTAAATAATCGAGGACACACTGACCTAGTAAACCATCTGCCAAG-AAAAGGGAGGAAATACTAGTTTTCTCCATTCGCTCTCAGGCACCAACATTAATTTGAACTTAGAAATAAACTACAATAAggccaggcacggtggttcacacctataattccagcactttgggaggccaaggaggaaggatcacctgagcccaggagtttgagaccagcctaggcaacatagtgagaccctgtccctacaattaaaaaataaattagctgggcatggtggtgcacacctgtagccccaactactcagaaggctgggttgggaagatcacttgagccgcccaggagtttgaggctgcagtaaactgagactgc i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204146869 484 + 204313951 --cagggcggagctcacatagtcaggctcactggcctgctgctcacctcctgctgtgtgttctggttcctaacaggccacgggctggtaacaatctgtggcctagggactggggagccctgATTTAAATAATCGAGGACACGCTTACCTAGTAAACCGTCTGTCAAG-AAAAAGGAGGAAATGTTCATTTTCTCCATCTGCTCTCAGGCACCAACGTCAATTTGAACTTACAAATAAACAACATCAAGTccaggcatggtggttcacacctatcattccagcactttgggaggccaaggatggaggatcacttgaacccaggagtttgagaccaggctaggcaacatggtgagacc--gtttctacaattaaaaaataaactggctgggcatggtggtgcacacctatagccccaactgctcaggaggctgggctgggaggatcacctgagcctcccaggagtctgaggctgcagcgagctgagattgc i calJac3.chr2 C 0 C 0 e mm10.chr13 74322012 696 + 120421639 I e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=28476.000000 s hg38.chr3_KI270937v1_alt 108806 41 + 165607 acca--------accctgtctcaaaaaaaaaaaaaaa----------aaaaagaaaCTG s panTro4.chr3_GL389630_random 82549 44 - 103936 accactgcaccaacctggtctcaaaaaaaaaaaaaaa---------------gaaaCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2436975 42 - 202140232 accactgcaccgatcctgtctcaaaaaaaaaaagaaa-----------------aaCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888169 41 - 123690457 accactgcaccgatcctgtctcaaaaataaaaaagaa------------------aCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180469376 57 - 180491593 accactgcactgatcctgtctcaaaaaaagaaaagaa-agaagaa-aaaaaaGAAACCA i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204147353 59 + 204313951 accactgcactgatcctgtctcaaaaaaaggaagaagaagaagaagaaagaaGAAACTG i calJac3.chr2 C 0 C 0 s mm10.chr13 74322708 29 + 120421639 --------ACCTGCCCTACTTCACACAGAGAATGAAC---------------------- i mm10.chr13 I 696 C 0 e canFam3.chr34 11934261 1339 + 42124431 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=853692.000000 s hg38.chr3_KI270937v1_alt 108847 531 + 165607 CAACAAAATATCTGGATTTTGATGTAACAGAATACAAAGATAATTACATTTGAT-TTTTAGGTCAACAAATATGAC--AAGTCATAACAGGAAAATATTTTAAATGGATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAACAGCTGTGCCCAGTTTTATCTTGTCACAAGAATGAAGCAAGGGACAAAGGTAAGT----GCCACGCTC-------------------------------CCCGGCCACTGGGT-GCCAATCCCC-CTTCAATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATAAAGACAGTTATGACATTGACACATGCATGAGCTATTATACATAATTACAAAAGCTGATTCTGTCATCACCACATCTTGTCTCATCAGTAGGAGTGAATGGCTGGGGGGACAGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCAATTATGGGTCTATATTCCACAGTGACCTTGAAAAGA--AGTCAGTGGTAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTCCTTTTGAAAAATTTTAACTATAA s panTro4.chr3_GL389630_random 82593 531 - 103936 CAACAAAATATCTGGATTTTGATGTAACAGAATACAAAGATAATTACATTTGAT-TTTTAGGTCAACAAATATGAC--ACGTCATAACAGTAAAATATTTGACATGGATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCTTGTCACAAGAATGAAGCAAGGGACAAAGGTAAGT----GTCACGCTC-------------------------------CCCGGCCACTGGGT-GCCAATCCCC-CTTCAATG-TACTCCTTCTTCCCCAGAGTGCAGAAGCGTATAAAGACAGTTATGACATGGACACATGTATGAGCTATTATACGTAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTATGGGTCTATATTCCAGAGTGACCTTGAAAAGA--AGTCAGTGGTAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTCCTTTTAAAAAATTTTAACTATAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437017 559 - 202140232 CAACAAAATATCTGGATTTTGATGTGACAGAATACAAAGACAATTACATTTGAT-TTTTAGGTCAACAAATATGAC--AAGTCACAACAGTAAAATATTGTAAATGGATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCATGTCACAAGAATGAAGCAAGGGACAAAGGTAAGT----GCCACGCTCCCTGGCCACTGGGTTCCT---GGCAAG--CTCCCGGCCACTGGGT-GCCAATCTCC-CCTCAATG-TACTCCTTCTTCCCTGGAGTGCAGAAGCGTATGAAGACACTTATGACATGGACACATACATGAGTTATTATACATAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGCAGGAGTGAATGGCTGGGGGGATGGCGGCACAGTCAGCCTCATTCAAAGTTTTGTCAATTACGGGTCTATATTCCAGGGTGACCTTGAAAAGAAGAGTCAGGGGTAAGGTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTCCTTTTGAAAATTTTTTACTATAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888210 561 - 123690457 TAACAAAATATCTGGATTTTGATGTGACAGAATACAAAGATAATTACATTTGAT-ATTTAGGTCAACAAATATGACTAAAGTCACAACAGTAAAATATTTTAAATGGATTTGGAAATAAAAGAAAGTTTGTTCATTTATATTTTATTTAAGAGCTGTGCCCAGTTTTATCGTGTCACAAGAATGAAGCAAGGGACAAAGGTAAGT----GCCACGCTCCCTAGCCACTGGGTTCCT---GGCAAG--CTCCCGGACACTGGGT-GCCAATCTCC-CTTCAATG-TACTCCTTCTTCCCTGGAGTGCAGAAGCGTATAAAGACAGTTATGACATGGACACATGCATGAACTATTACACATAATTACAAAAGCTGATTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCAATTATGGGTCTATATTCCAGAGTGACCTTGAAAAGAAGAGTCAGTGGTAAGTTAA-----GCACAAAAATGTACAAAAAGCCATCTCTTGTGTTCCTTTTGAAAAATTTTAACTATAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180469433 556 - 180491593 CAACAAAATATCTGGATTTTGATGTAACAGAATACAAAGATTATTACATTTGAT-TTTTAGGTCAACAAATATGACTAAAGTCATAATAGTAAAATATTTTAAATGGATTTGGAAATAAAAGAAAGTTTGTTCATTTGTATTTTATTTAAGAGCTGTGCCCAGTTTTATCATCTCACAAGAATGAAGCAAGGGACAAAGGTAAGT----GCCACGTTCCCTGGCCACTGGGTTCCT---GGCAAG--CTACCAGCCACTGGGT-GCCAATCTCC-CTTCAATG-TACTCCTTTTTCCCCGGAGTGCAGAAGCGTATAAAGGCAGTTATGACATGGACACATGCATGAGCTATTATACATAATTACAAAAGCTGATTCTGTTATCACTGCATCTTGTCTCATCAGTAGGAGCGAATGGCTGGGGGGACGGTGGCACAGTCAGCCTCGTTCAAAGTTTTGTCGATTACGGGTCTATATTCCAGAGTGACCTTGAAAAGAAGAATCAGTGG-----TAA-----GCAtaaaaatgtacaaaaagccatctcatgtattccttttgaaaaatttaaactataa i rheMac3.chr6 C 0 C 0 s calJac3.chr2 204147412 547 + 204313951 CAACAAAATCTCTGGATTTTGATGTAACAGAATGCAAAGATAATTCCATTTGATATTTTAGGTCAACAAATATGACTAAAGTCATGACGGTAAAATATTTTAAGTGGATGTGGAAATAAAAGAAAGTTTGTTCATCTATGTTTTATTTTAGGGCTGTGTCCAGTTTTATGGTCTCACAAGAATGAAGGGAGGGACAAAGGTAAGT----GCTGCGGTC---------------CCT---GGCCGG--CTCCCGGCCACTGGGT-GCCCATCTCC-CTTCAATG-GACTCCCTCTTCACCCCAGTGCAGAAGCTTATAAAGACAGTTACGACATGAACACATGCATGAGCTATGATACATAATTACAAAGGCTGCTTCTGTCATCACCGCATCTTGTCTCATCAGTAGGAGCGAATGGCCGGGGGAACGGAGGTGCAGTCAGCCTCGTTCAAAGTTTTGTCGATTACAGGTCTATATTCCAAAGTGACCTTGAAAAGAAGGGTCAGCGGTAAGTTAA-----GCACAAAAATGTACAAATAGCCATCTCTTGTGTTCCTTTTGAAAATTTTTAACTATAA i calJac3.chr2 C 0 I 720 s mm10.chr13 74322737 520 + 120421639 -AAAACAATACTTGTGCTGCAGCTAGACAGCG---GAAGAAAATTATATTTGCTGTTTCAGACCAATAGATAGAACTAAAATC-CACTACTACATGGTTTT------ATTTGGAAATAAAAGA----TTGCTCATTTGTACTTCACTTAAGAATTATG-CCAGTTTTATCACTGCACAAGAATAA----AGAGACAAAGTCTGGC----GCAAC--TC-----------AATCCCTTACAGCAAGTACTACCAAGCTGTTGAT-CACAATCTA----TGAAGT-GACTCCTTGTTCAT--GAGAGCAGAATTTTACCAAGACAAGTATGA-GGGGAAACGCAGGTAAGCTATGCTATATAATCACATAAGCTGGTCCTGTAGC-----TGTCAGGTTTCATCAGTAGGAGCGGATAGCAGGAGGTACGGTGGCACAGTCAGCCTCATTCAAGGTCTTGTCGATAACAGGTCTGTACTCCAAAGTAACCTTGGAGAAAAGAGTCGGGGTGAATCAAG-----GCATGAATATTTACAAACAGCCATTTCTTCTGTGCTTCTGTAAAA--TTAGGCCATC- i mm10.chr13 C 0 C 0 s canFam3.chr34 11935600 519 + 42124431 CAACAAAATTTCTGGATATTGATC-------------------------------TTTCAGGTCAACA-ACATGCCTCAAGTCA-AATAGTACAAGTTCTTAAATGGACTTGGAAATAGAAG-----TTTGTAATTTATGCTTTATTTAAGAATCATGCCCAGTTTTATTATTTCACAAGGATGATGAA---GCAAAAGGTAAGCTTCATTCACACTTCCTGGCTGTT-GATTACT---AGCAAG--CTTCTGGCTACCGGGTAGATGATCTCTATTCCAATGACACTCCTTATTCACTTGAGTACAGGATTTTAAAAAGGTAATTAGGATATGAACACACGCATGAGCTATTATACATAATTACAAAAGCTGGT-----------CAACTCTGGTCTCATCAGTAGGAGCGAATGGCTGGAGGGACCGTGGCACAGTCAGCCTCATTTAAAGTTCTGTCGATCACAGGTCTATATTCCAATGAGACCTTAAAAAGAAGAATCTACAGTAAGTTAAAATTTGTGGAAAAACATAAAAACAGTATTCGCTTGTATATTTTTTGAAAAATTC--ACTATAA i canFam3.chr34 I 1339 C 0 e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=1911.000000 s hg38.chr3_KI270937v1_alt 109378 1 + 165607 A s panTro4.chr3_GL389630_random 83124 1 - 103936 A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437576 1 - 202140232 A i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888771 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180469989 1 - 180491593 a i rheMac3.chr6 C 0 C 0 s mm10.chr13 74323257 1 + 120421639 A i mm10.chr13 C 0 C 0 s canFam3.chr34 11936119 1 + 42124431 A i canFam3.chr34 C 0 C 0 e calJac3.chr2 204147959 720 + 204313951 I e chlSab2.chr4 1382360 0 + 91010382 C e papAnu2.chr6 1258647 0 + 174439528 C e macFas5.chr6 1288236 0 + 181584905 C a score=75076.000000 s hg38.chr3_KI270937v1_alt 109379 31 + 165607 AGTAGATTTAC-GGCA-----TGTGAACTTTaaggta------ s panTro4.chr3_GL389630_random 83125 31 - 103936 AGTAGATTTAC-GGCA-----TGTGAACTTTaaggta------ i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437577 31 - 202140232 AGTAGATTTAC-GGCA-----TGTGAACTTTaaggta------ i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888772 31 - 123690457 AGTAGATTTAC-GGCA-----TGTGAACTTTaaggta------ i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180469990 31 - 180491593 agtagattaat-ggca-----tgggaacttaaaagta------ i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1288236 31 + 181584905 AGTAGATTTAC-GGCC-----TGGGAACTTAAAGGTA------ i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258647 31 + 174439528 AGTAGATTTAC-GGCC-----TGGGAACTTAAAGGCA------ i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382360 31 + 91010382 AGTAGATTTAT-GGCC-----TGGGAACTTAAAGGTA------ i chlSab2.chr4 C 0 C 0 s mm10.chr13 74323258 32 + 120421639 AGTACATTTACAGGCA-----TGAGAACTTTAAGACA------ i mm10.chr13 C 0 I 262 s canFam3.chr34 11936120 42 + 42124431 AGTTATTTGTA-GACAAATTTCAGGAACTTAAAATCacaaata i canFam3.chr34 C 0 C 0 e calJac3.chr2 204147959 720 + 204313951 I a score=76836.000000 s hg38.chr3_KI270937v1_alt 109410 29 + 165607 ---tttgctgcagtattttccaataacaaatt s panTro4.chr3_GL389630_random 83156 29 - 103936 ---tttgctgcagtattttccaataacaaatt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437608 29 - 202140232 ---tttgccgcagtattttccagtaacaaatt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888803 29 - 123690457 ---tttgctgcagtattttccagtaacaaatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470021 29 - 180491593 ---tttgccgcagtcttttccaataacaaatt i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1288267 29 + 181584905 ---TTTGCCGCAGTCTTTTCCGATAACAAATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258678 29 + 174439528 ---TTTGCCGCAGTCTTTTCCGATAACAAATT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382391 29 + 91010382 ---TTTGCCGCAGTCTTTTCCAATAACAAATT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11936162 31 + 42124431 ctcattg-tggagtatttttcagtaacaaact i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e calJac3.chr2 204147959 720 + 204313951 I a score=580126.000000 s hg38.chr3_KI270937v1_alt 109439 217 + 165607 caaaaatgatct--acatgcgcaaca-ggggac------tgtaaatgacggcagatcggtagagtggaacagagcaacgaaaatgacactgtaccagattctcagtgctttgctttacaaaaatgctcccatcatgaaaagtgggagaacccttgtctataccaagacact----tcatgtttaaactatctacttcc----agtttttctacttcaaagtaaatatttatata s panTro4.chr3_GL389630_random 83185 213 - 103936 caaaaatgatct--acatgcgcaacagggggac------tgtaagtgacggcagatctgtagagtggaacagagcaatgaaaatgacactgtaccagattctcag-----tgctttacaaaaatgctcccatcatgaaaagtgggagaacccttgtctataccaagacact----tcatgtttaaactatctacttcc----agtttttctacttcaaagtaaatatttatata i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437637 212 - 202140232 cagaaatgatct--acatgcgcaaca-ggggac------tgtaaatgacggcagatccgtagagtggaacggaacaatgaaaatgacactgtaccagattctcag-----tgctttacaaaaacactcccatcacgaaaagtgggagaacacttgtctataccaacacact----tgatgtttaaaccatctacttcc----agtttttctacttcaaagtaagtatttataca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2888832 211 - 123690457 caaaaatgatct--acatgcgcaaca-ggggag------tgtcaatgatggcagatccacaga-tggaacagagcaacgaaaatgacactgtaccagattctcag-----tgctttacaaaaatgctcccgtcatgtagagtgggagaacccttgtctataccaagacact----tcatgtttaaactatctacttcc----agttcttccacttcaaagtaaatatttatata i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470050 197 - 180491593 caaaaatgatct--acatgcgcaaca-ggggac------tgtaaatggcggcagatccctagagtggaacagagcgacg-aaatgaccctgtgccagattctcag-----tgctttacaaaaatgctcccgtcatgaaaagtgggagaacccttgtctataccaagacact----ttat-----aactacctacttcc----ag---------ttcaaagtaaatatttacata i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1288296 202 + 181584905 CAACAATGTTCC--ACATGCGCAACA-GGGGAC------TGTAAATGGCGGCAGATCCCTAGAGTGGAACAGAGCGACG-AAATGACCCTGTGCCAGATTCTCAG-----TGCTTTACAAAAATGCTCCCGTCATGAAAAGTGGGAGAACCCTTGTCTATACCGAGACACT----GTATGTTTAAACTACCTACTTCC----AG---------TTCAAAGTAAATATTTACATa i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258707 202 + 174439528 CAACAATGTTCC--ACATGCGCAACA-GGGGAC------TGTAAATGGCGGCAGATTCGTAGAGTGGAACAGAGCGACG-AAATGACCCTGTGCCAGATTCTCAG-----TGCTTTACAAAAATGCTTCGGTCATGAAAAGTGGGAGAACCCTTGTCTATACCAAGACACT----TTATATTTAAACTACCTACTTCC----AG---------TTcaaagtaaatatttacata i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382420 201 + 91010382 CAAAAATGATCT--ACATGCGCAACA-GGGGAC------TGTAAATGGCGGCAGATCCGTAGAGTGGAACAGAGCGACG-AAATGACCCTGTGCCAGATTCTCAG-----TGCTTTACAAAAATGCT-CGGTCATGAAAAGTGGGAGAACCCTTGTCTATACCGAGACACT----GTATGTTTAAACTACCTACTTCC----AG---------TTCAAAGTAAATATTTACATa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204148679 216 + 204313951 CGAAAATGACACTGTCATGCACGACG-GGGGACC----GTGTCAATAAGGACAAGTCTGCAGGGTGGAACACAGCCCCGAAAATGACACTGTGCAAGAGTCTCAG-----TGCTGTACAAAAATGCTCCCATCATGAAAAGTGGGAGAACCCTCGTATATACCAAAACACT----TTATGTTCAAGCTATCTACTTCC----AGTTTTTCTACTTCAAAGTAAATATTTATATa i calJac3.chr2 I 720 C 0 s canFam3.chr34 11936193 207 + 42124431 caaaaatgacct--aaacgtacaata-ggggaccaggtatgtaaattatggtaactccatgtaatgaaatacagcaactaaaataacaatgtataaaattcttga-----tgctttacacaaatgctc-------aagaagt----gaaaccttgcatatattatcattctttaattatgcttaaaccctgtatttaccaaaagtttttctattt--------gtatttatata i canFam3.chr34 C 0 I 149 e mm10.chr13 74323290 262 + 120421639 I a score=1205700.000000 s hg38.chr3_KI270937v1_alt 109656 417 + 165607 ggtagaacatccctaatccaaacatctgaaattctcccaaatctgaaactttct-gagcaccagcatgacattcaaaagaaatgtgctatggagtcagatcttccgattaaggatgctcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaagccgtgtattaaatatgcacacacaggaaaaggtaggcacatatacaaagaaatttaaaccataatgggtcatctc----tggttagtgagctcttatttcaatctctttgtactttctaaaatgagtatgtatttcttcaaaaatcactgaaaCTggctgggcgtgttggttcatgcctgttggggaggccaagacaggtggatcact s panTro4.chr3_GL389630_random 83398 418 - 103936 ggtagaacatccctaatccaaacatctgaaattctcccaaatctgaaactttctagagcaccagcatgacattcaaaagaaatgtgctatggagtcagatcttccgattagggatgctcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaaggatttcagagaaggaatactcaagccatgtattaaatatgcacacacaggaaaaggtaggcacatatagaaagaaatttaaaccataatgggtcatctc----tggttagtgagctcttatttcaatctctttgtactttctaaaatgagtatgtatttcttgaaaaatcactgaaaCTggctgggcgtgttggttcatgcctgttggggaggccaagacaggtggatcact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2437849 417 - 202140232 ggttgaacatccctaatccaaacatctgaaattctcccaaatatgaaattttct-gagcaccagcatgacattcaaaacaaatgtgctagggagtcagatcttccgattagggatgctcagacagtaagtataatgcaa--acattccaaagtctgaacaagcctgaaatccaaaacacttctggtcccaagggtttcagagaaggaatactcaagctgtatattaaatatgcacacacaggaaaaggcaggcccatacacaaagaaatttaaaccataatgggtcatctc----tggttagtgagctcttatttcaatctctttgtactttctAAAATGAGTATGTATTTCTTGAAAAATCACTGAAACTggctgggcgtgttggttcatgcctgttggggaggccaagacacgtggatcact i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889043 417 - 123690457 ggttgaacatccctaatccaaacatctgaaattctcccaaatctgaaactttct-gagcaccaacatgccattcaaaagaaatgtgctatggagtcagatcttcccattagggatgctcagacagtaagtataatgcaa--atattccaaagtctgaacaagcccgaaatccagaacgcttctggtcccaaggatttcagagaaggaatactcaagccatgtattaaatatgcacacacaggaaaaggtaggcgcagatacaaagaaatttaaaccataatgggtcatctc----aagttagtgagctcttatttcaatctctttgtactttctaaaatgagtatgtatttcttgaaaaatcactgaaaCTggctgggcgtgtttgttcatgcctgttggggaggccaaaacaggtggatcact i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470247 415 - 180491593 ggttgaacatccctaatgcaaaaatctgaaattctccaaaatctgaagctttct-gagcaccaacatgacattcaaaagaaatgtgctatggagtcagatcttctgatt-gggatgctcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaatactcaagttgtgtattaaatatgcacacacaggaaaaggtaggcacatatacaaagaaatttaaaccataatgggtcatctc----tggtt-gtgagctcttatttcaatctctttgtactttctgAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTGGCTGAGCGTGTTGGTTCATGCCTGTTGGGGAGGTCAAGACAGGTGGATCACT i rheMac3.chr6 C 0 I 53 s macFas5.chr6 1288498 407 + 181584905 ggttgaacatccctaatgcaaaaatctgaaattctccaaaatctgaagctttct-gagcaccaacatgacattcaaaagaaatgtgctatggagtcagatcttctgatt-gggatgctcagacagtaagtatcatgcag--atattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaa--------tTGTATATTAAAAATGCACACACAGGAAAAGGTAGGCACATACACAAAGAAATTTAAACCATAATGGGTCGTCTC----TGGTT-GTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATAAGTATGTGTTTCTTGAAAAATCACTAAAACTggctgagtgtgttggttcatgcctgttggggaggtcaagacaggtggatcact i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1258909 416 + 174439528 gGTTGAACATCCCTAATACAAAAATCTGAAATTCTCCAAAATCTGAAGCTTTCT-GAGCACCAACATGACATTCAAAAGAAATGTGCTACGGAGTCAGATCTTCCGACT-GGGACACTCAGACAGTAAGTATCATGCAG--ATATTCCAAAGTCTGAACAAGCCTGAAAtccgaaacacttctggtcccaaggaTTTCAGAGAAGGAATACTCAAGTTGTGTATTAAATATGCACACACAGGAAAAGGTAGGCACatatacaaagaaatttaaaCCATAATGGGTCATCTT----TGGTTAGTGAGCtcttatttcaatctctttgtacTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTGGCTGAGCgtgttggttcatgcctgttggggaggtcaagacaggtggatcact i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1382621 411 + 91010382 ggttgaacatccctaatccaaaaatctgaaattctccaaaatctgaagctttct-gagcaccaacatgacattcaaaagaaatgtgctatggagtcagatcttccgactggggacactcagacagtaagtatcatgcagatatattccaaagtctgaacaagcctgaaatccgaaacacttctggtcccaaggatttcagagaaggaa--------tTGTATATTAAAAATGCACACACAGGAAAAGGTAGGCACACACACAAAGAAATTTAAACCATAATGGGTCGTCTC----TGGTTAGTGAGCTCTTATTTCAATCTCTTTGTACTTTCTGAAATGAGTATGTATTTCTTGAAAAATCACTAAAACTggctgagcgtgttggttcatgcctgttggggaggtcaagacaggtggatcact i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204148895 415 + 204313951 ggttgaacatccctaatccaaaaatctgaaattctccaaaacttgaaactttct-gagcaccaatatgacattcaaaagaaatgcaccatggagtcagatcttccaattagggatgatcagacagtaagtgtaatgcaa--atattccaaagtctgaacaagccggaaatccaaaacactgctggccccaaggatttcagat-aggaacactcaagctgTGTACTAAATATGCACACAGAGTCAATGGTAGACACACACACA---CACTCAAAACCATAATGGGCCCTCTCCTCTCTGTTACTGAGCTCTTATTTCAGTCTCTTTGTACTTTCTAAAATGAGTATGTATTTCTTGAAAAATCACCAAAACTAGCCAGCCATGTTGGTTCATGCCTGttggggaggccaaggcaggtggatca-- i calJac3.chr2 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e canFam3.chr34 11936400 149 + 42124431 I a score=456225.000000 s hg38.chr3_KI270937v1_alt 110073 218 + 165607 tgagctcaggagctcaagactagcctgggcaacgtggcaaaaccccgtctctacaaaacatacaaaaattagcca--------ggcatggtggcatgtgcccgggaggctgaggtgggaggatcacctgagccgaggggaggttgaggctgcagtgagatgagatcgagccaccacatttcagcctgggcaaaagagatgagactctatctcagaacaacaaaaac s panTro4.chr3_GL389630_random 83816 218 - 103936 tgagctcaggagctcaagactagcctgggcaatgtggcaaaaccccgtctctacaaaacatacaaaaattagcca--------ggcatggtggcatgtgcccgggaggctgaggtgggaggatcacctgagccggggggaggttgagggtgcagtgagacgagatcgagccaccacatttcagcctgggcaaaagaggtgagactctatctcagaacaacaaaaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438266 226 - 202140232 tgagctcagcagttcaagactagcctgggcaacgtggcaaaaccccatctctacgaaacatacaaaaattagccaggcatggtggcatggtggcatgtgcccgggaggctgaggtgggaggatcacctgagccggggggaggttgaggctgcagtgagacgagatcgagccaccacatttcagcctgggcaacagagataagactctatctcagaaaaacaaaaac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889460 218 - 123690457 tgagctcaggagctcaagaccagcctgggcaacgtggcaaaaccccgtctctacaaaacatacaaaaattagcca--------ggcatggtggcatgtgcctgggaggctgaggtgggaggatcacctgagccggcgggaggttgaggctgcagtgagacgagatcgagccaccacatttcagcctgggcaacagagatgagactctatctcagaaaaacaaaaac i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1288905 198 + 181584905 --------agagttcaagactagcctaggcaatgtggcaaaaccccgtctctacaaaacatacaaaaattagcca--------ggcatggtggtgtgtgcctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacaagatcgacccaccacatttcagcctgggcaacagagatgaga--ctgtctcagaa---------- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1259325 197 + 174439528 --------tgagttcaagaccagcctaggcaacgtggc-gaaccccgtctctacaaaacatacaaaaattagcca--------ggcatggtggcatgtgcctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctgcagtgagacaagatcaagCCAccacatttcagcctgggcaacagagatgaga--ctgtctcagaa---------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383032 198 + 91010382 --------tgagttcaagactagcctaggcaacgtggcgaaaccccatctctacaaaacatacaaaaattagcca--------ggcatggtggcgtgtgcctgggaggctgaggtgggaggatcacctgagccagggggaggttgaggctacagtgagacaagatcgagccaccacatttcagcctgggcaacagggatgaga--ctgtctcagaa---------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149310 214 + 204313951 tgagctcaggagttcaaaactagtctgggcaacatggtgaaaccgtgtctctacaaaacatacaaaaattagcca--------ggcatggtggcacgtgcctgggaggctgaggcaggaggatcacttgagcctgggggaggttgaggctgcagtgagatgagaccaagccactgcattccagcctgggcaacagag-tgagactctatctcagaaataaaac--- i calJac3.chr2 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e canFam3.chr34 11936400 149 + 42124431 I e rheMac3.chr6 180470662 53 - 180491593 I a score=40641.000000 s hg38.chr3_KI270937v1_alt 110291 15 + 165607 aaaac-aaaaaaCCTG s panTro4.chr3_GL389630_random 84034 15 - 103936 aaaac-aaaaaaCCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438492 15 - 202140232 aaaac-aaaaaaCCCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889678 15 - 123690457 aaaac-aaaaaaCCCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470715 15 - 180491593 AAAAC-AAAAAACCCG i rheMac3.chr6 I 53 C 0 s macFas5.chr6 1289103 14 + 181584905 -aaac-aaaaaaCCCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1259522 14 + 174439528 -aaac-aaaaaaccca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383230 14 + 91010382 -aaac-aaaaaaCCCG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149524 16 + 204313951 aaaacaaaaaaaCCCA i calJac3.chr2 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e canFam3.chr34 11936400 149 + 42124431 I a score=540508.000000 s hg38.chr3_KI270937v1_alt 110306 174 + 165607 AACCCGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAAGTGTGA----CCTCTCTATACTATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCCACTGCCTGA-ATCACAGACACACTAGATGAT--------AGTGAGAGTC-CAAAG---GTAACTTCCACAGACACAGCTAAGTGATT s panTro4.chr3_GL389630_random 84049 174 - 103936 AACCCGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAAGTGTGA----CCTCTCTATACTATCAGGAAATGGCCTTCATGATAAATCCTGAAAATGACCCACTGCCTGA-ATCACAGACACACTAGATGAT--------AGTGAGAGTC-CAAAG---GTAACTTCCACAGACACAGCTAAGTGATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438507 174 - 202140232 AACCTGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAAGTGTGA----TTTCTATACACTACCAGGAAATGGTCTTCATGATAAATCCTGAAAATGACCTACTGCCTGA-ATCACAGACAAACTAGATGAT--------AGTGAGAGTC-CAAAG---GTAACTTCCACAGACACAGCTAAGTGATT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889693 174 - 123690457 AACCTGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAAGTGTGA----TTTCTATACAGTATCAAGAAATGGCCTTCATGATAAATCCTGAAAATGACCTACTGCCTGA-ATAACAGACACACTAGATGAT--------AGTGAGAGTC-CAAAG---GTAACTTCCACAAACATGGCTAAATGATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470730 174 - 180491593 AACCCGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAGGTGTAA----TTTCTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTGCCTGA-GTTACAGACACACTAGATGAT--------AGTGAGAGTC-CACAG---GTAACTTCCACAGACACAGATAAGTGATT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1289117 174 + 181584905 AACCCGGAAACAT---TAAAAATAGACTTGTGCTAAGCGAGTGAGGTGTGA----TTTCTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTGCCTGA-ATTACAGACACACTAGATGAT--------AGTGAGAGTC-CACAG---GTAACTTCCACAGACACAGATAAGTGATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1259536 173 + 174439528 aacccggaaacat---taaaaatagacttGTGCTAAGCGAGTGA-GTGTGA----TTTCTATATACGATCAGGAAATGGCCTTCATGATAAATTCTGAAAATGACCTACTGCCTGA-ATTACAGACACACTAGATGAT--------AGTGAGAGTC-CACAG---GTAACTTCCACAGACACAGATAAGTGATT i papAnu2.chr6 C 0 M 50 s chlSab2.chr4 1383244 171 + 91010382 AACCCGGAAACAT---TAAAAACAGACTTGTGCTAGGCGAGTGAGGTGTGA----TTTCTATATACGATCAGGAAATGGCCTTCATGACAAATTCTGAAAATGACCTACTGCCTGA----ACAGACACACTAGATGAT--------AGTGAGAGTC-CAAAG---GTAACTTCCACAGACACAGATAAGTGATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149540 172 + 204313951 AACCCCAAAACGT---TAAAAACAGACTTTCGCTAAGCAAGTGAAGTGTGA----TTTTTATATACTATCAGAAAATGGCCTTCATGATAAATCCTGAAAATGACCGATTGCCTGA-ATTACAGGCATACTAAATGAC--------AGTGAGAGCC-CAAAC---GAAACAGC--CAGACGCATGTAAATGATT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936549 191 + 42124431 AACCCTTGAACATTACTAAAAACAGGGCTGTACCGAGAGA---AAGTCTCATTTCTTTCTATACACTGTCAGAAAATAGCCTTCACGCAAAATTATGAAAGTTACTGCCTACTTGAAATAACAGACACACTAGGCTCTCTGTATTAAGTGATGGCAGCAAAGCACGTTATTTCTGTAGACTCACATAAATGATT i canFam3.chr34 I 149 C 0 e mm10.chr13 74323290 262 + 120421639 I a score=229144.000000 s hg38.chr3_KI270937v1_alt 110480 85 + 165607 ATACGACTCTCCCTTACAAGTTATGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATGATTTCTGAATCTCAATGCCCAGTGGA s panTro4.chr3_GL389630_random 84223 85 - 103936 ATACGACTCTCCCTTACAAGTTATGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATGATTTCTGAATCTCAATGCCCAGCAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438681 85 - 202140232 ATACGACTCTCTCTTACAAGCTAAGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATTATTTCTGAATCTTAATGCCCAGCGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889867 85 - 123690457 ATACGACTATCTCTTACAAGCTACGAAAAGCTTAAGGGTAAAAGCTTTCTGTCTTCATTATTTTTGAATCTCAATGCCCAGCGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470904 85 - 180491593 ATACGACTATCTCTTACAAGCTACGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATTATTTCTGAATCTTAATGCCCAGCGGA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1289291 85 + 181584905 ATACGACTATCTCTTACAAGCTACGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATTATTTCTGAATCTTAATGCCCAGCGGA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1383415 85 + 91010382 ATACGACTATCTCTTACAAGCTACGAAAAGCTTAAGGGTAAAAGCTTTCTATCTTCATTATTTCTGAATCTTAATGCCCAGCGGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149712 85 + 204313951 ATACAACTATCTCTTACAAGCTATGAAAAGCTTAAGGGTAAAAGCTTTCCATCTTCATTATTTCTGAATCTTAATGCCCAGTGGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936740 75 + 42124431 --AAGACTCTCCCTTACAAG-TCTGAAAAGCTCAAGT---AACACTTTATATCTT----AGTTCTGATTCTTAATGTCCAGCAGA i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e papAnu2.chr6 1259709 50 + 174439528 M a score=68943.000000 s hg38.chr3_KI270937v1_alt 110565 28 + 165607 AATGCCACACAGGTGAACTGTGCTTGTG s panTro4.chr3_GL389630_random 84308 28 - 103936 AATGCCACACGGGTGAACTGTGCTTGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438766 28 - 202140232 AATGCCACACGGGTGAACTGTGCTTGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889952 17 - 123690457 AATGCCACACGGGTGAA----------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180470989 28 - 180491593 AATGCCACACAGGTGAACTGTGCTTGTG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1289376 28 + 181584905 AATGCCACACAGGTGAACTGTGCTTGTG i macFas5.chr6 C 0 I 3 s papAnu2.chr6 1259759 17 + 174439528 aaTGCCACACAGGTGAA----------- i papAnu2.chr6 M 50 C 0 s chlSab2.chr4 1383500 28 + 91010382 AATGCCACACAGGTGAACTGTGCTTGTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149797 27 + 204313951 AATGCCACAT-GGTGAACTGCGCTTGCG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936815 28 + 42124431 AATGGCAAATGGATGAGTTATGCTTTGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I a score=6111.000000 s hg38.chr3_KI270937v1_alt 110593 3 + 165607 TGG s panTro4.chr3_GL389630_random 84336 3 - 103936 TGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438794 3 - 202140232 TGG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180471017 3 - 180491593 TGG i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 1383528 3 + 91010382 TGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149824 3 + 204313951 TGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936843 3 + 42124431 TGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e papAnu2.chr6 1259776 0 + 174439528 C e macFas5.chr6 1289404 3 + 181584905 I e nomLeu3.chr11 2889969 0 - 123690457 C a score=14021.000000 s hg38.chr3_KI270937v1_alt 110596 6 + 165607 AACAAG s panTro4.chr3_GL389630_random 84339 6 - 103936 AACAAG i panTro4.chr3_GL389630_random C 0 I 130 s ponAbe2.chr3 2438797 6 - 202140232 AACAAG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180471020 6 - 180491593 AACAAG i rheMac3.chr6 C 0 I 1 s macFas5.chr6 1289407 6 + 181584905 AACAAG i macFas5.chr6 I 3 I 1 s chlSab2.chr4 1383531 6 + 91010382 AACAAG i chlSab2.chr4 C 0 I 1 s calJac3.chr2 204149827 6 + 204313951 AACAGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936846 6 + 42124431 AATAAG i canFam3.chr34 C 0 I 1 e mm10.chr13 74323290 262 + 120421639 I e papAnu2.chr6 1259776 0 + 174439528 C e nomLeu3.chr11 2889969 0 - 123690457 C a score=26897.000000 s hg38.chr3_KI270937v1_alt 110602 46 + 165607 CTGCAA-CCCCCTACCACACCCTCGGCTGGCTGTTCCCAAGACGCTG s panTro4.chr3_GL389630_random 84475 46 - 103936 CTGCAA-CCCCCTACCACACCCTCGGCTGGCTGTTCCCAAGACGCTG i panTro4.chr3_GL389630_random I 130 C 0 s nomLeu3.chr11 2889969 3 - 123690457 --------------------------------------------CTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180471027 47 - 180491593 CTGCAACCCCCCTACCACACCCTTGGCTGGCTGTTCCCAGGACGCTG i rheMac3.chr6 I 1 I 15 s macFas5.chr6 1289414 47 + 181584905 CTGCAACCCCCCTACCACACCCTTGGCTGGCTGTTCCCAGGACACTG i macFas5.chr6 I 1 T 57 s papAnu2.chr6 1259776 3 + 174439528 --------------------------------------------CTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383538 47 + 91010382 CTGCAGCCCCCCTACCACACCCTTGGCTGGCTGTTCCCAGGACGCTG i chlSab2.chr4 I 1 C 0 s canFam3.chr34 11936853 33 + 42124431 CTGTGA-GGCTCTACTGCAACCTAAGCTGGCTGT------------- i canFam3.chr34 I 1 C 0 e ponAbe2.chr3 2438803 0 - 202140232 C e mm10.chr13 74323290 262 + 120421639 I e calJac3.chr2 204149833 0 + 204313951 C a score=4584.000000 s hg38.chr3_KI270937v1_alt 110648 8 + 165607 TGCTTGTG s panTro4.chr3_GL389630_random 84521 8 - 103936 TGCTTGTG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2889972 8 - 123690457 TGCTTGTG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 1259779 8 + 174439528 TGCTTGTG i papAnu2.chr6 C 0 C 0 e ponAbe2.chr3 2438803 0 - 202140232 C e mm10.chr13 74323290 262 + 120421639 I e calJac3.chr2 204149833 0 + 204313951 C e canFam3.chr34 11936886 0 + 42124431 C e chlSab2.chr4 1383585 0 + 91010382 C e macFas5.chr6 1289461 57 + 181584905 T e rheMac3.chr6 180471074 15 - 180491593 I a score=61792.000000 s hg38.chr3_KI270937v1_alt 110656 53 + 165607 TGGAACAA-GCTGCAACCCCCCTACCAC--ACCCTCGGCTGGCTGTTCCCAGGACG s panTro4.chr3_GL389630_random 84529 53 - 103936 TGGAACAA-GCTGCAACCCCCCTACCAC--ACCCTTGGCTGGCTGTTCCCAGGACG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438803 45 - 202140232 ---------GCTGCAACCCCCCTACCAC--ACCCTCAGCTGGCTGTTCCCAGGACG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2889980 54 - 123690457 TGGAACAAGGCTGCAACCCCCCTACCAC--ACCCTCGGCTGGCTGTTCCCAGGATG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1289404 54 + 181584905 TGGAACAAGGCTGCAACCCCCCTACCAC--ACCCTTGGCTGGCTGTTCCCAGGACA i macFas5.chr6 T 57 I 18 s papAnu2.chr6 1259787 54 + 174439528 TGGAACAAGGCTGCAACCCCCCTACCAC--ACCCTTGGCTGGTTGTTCCCAGGACA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383585 16 + 91010382 --------------------CTCACCACAAACCCTC-------------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149833 44 + 204313951 ---------GCTGCAAGCCTCC-AGCAC--ACCCTCGGCTGGCTGTTACCAGGACG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936886 9 + 42124431 -----------------------------------------------CCCAGGACT i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I e rheMac3.chr6 180471074 15 - 180491593 I a score=42608.000000 s hg38.chr3_KI270937v1_alt 110709 13 + 165607 CTGCTTACCCCAA s panTro4.chr3_GL389630_random 84582 13 - 103936 CTGCTTACCCCAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438848 13 - 202140232 CTGCTCACCCCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2890034 13 - 123690457 CTGCTTACCCCAA i nomLeu3.chr11 C 0 I 214 s rheMac3.chr6 180471089 13 - 180491593 CTGCTCACCCCAA i rheMac3.chr6 I 15 C 0 s macFas5.chr6 1289476 13 + 181584905 CTGCTTACCCCAA i macFas5.chr6 I 18 C 0 s papAnu2.chr6 1259841 13 + 174439528 CTGCTCACCCCAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383601 12 + 91010382 -TGCTCACCCCAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149877 13 + 204313951 CTGCTCACCCAAC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936895 13 + 42124431 CTGCCCACTGCAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I a score=636005.000000 s hg38.chr3_KI270937v1_alt 110722 214 + 165607 CCCTGCCTCCATTTCTG-----CCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCTGCTCCCCTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAAGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGACTGGTTTCTGGTAGTGGC--TCTGTCCCCACCACACAGATGCTGACTT--TCTCGCTAGGTCC- s panTro4.chr3_GL389630_random 84595 214 - 103936 CCCTGCCTCCATTTCTG-----CCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCAGCTCCCTTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTCGGGACTGGTTTCTGGTAGTGGC--TCTGTCCCCACCCAACAGATGCTGACTT--TCTCGCTAGGTCC- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2438861 214 - 202140232 CCCCGCCTCCATTTCTG-----CCCTTCTCTACTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGTACCACATCCCCTCAGCTCCCCTGCAGATGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTTAGGACTGGTTTCTGGTAGTGGC--TGTGTCCCCACCCCACAGATGCTGACTT--TCTCGCCAGGTCC- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2890261 214 - 123690457 CCCCTCCTCAATTTCTG-----CCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCAGCTCCCCTGCAGGCGCTTCCAGTTGGCCCAGCCCATGGGAGGAGAGGGGAGGGGTCTCTTCCGGGCTCTCTTGGCATGGGACTGGTTTCTGGTAGTGGC--TGTGTCCCCACCCTACAGATGCTGACTT--TCTCGCTAGGTCC- i nomLeu3.chr11 I 214 C 0 s rheMac3.chr6 180471102 221 - 180491593 CCCCTCCTCAATTTCTGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGCGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTCCAGCTGGGCCAGCCCAAGGGAGGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGACTGGTTTCTGGTAGTGGCTGTGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1289489 219 + 181584905 CCCCTCCTCAATTTCTGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGCGCTGCACCACATCCCCTCGGCTCCCCTGCAGATGCTTCCAGCTGGGCCAGCCCAAGGGAGGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGACTGGTTTCTGGTAGTGGC--TGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1259854 219 + 174439528 CCCCTCCTCAATTTCTGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGTACCACATCCCCTCGGCTCCCCTGCAGATGCTTCCAGTTGGGCCAGCccaagggaggagaggggaggggtctCTTCTGGGCTCCCTTGGCTTGGGACTGGTTTCTGGtagtggc--tgtgtccccaccccacagACGCTGACTT--TCTCCCTAAGTCC- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383613 221 + 91010382 CCCCTCCTCAATTTCTGCCCTTCCCTTCTCTGCTTGCTCAGTGCCCAGGGGATGCTAAGGGCTGCACCACATCCCCTCGGCTCCCGTGCAGATGCTTCCAGTTGGGCCAGCTCAAGGGAGGAGAGGGGAGGGGTCTCTTCTGGGCTCCCTTGGCTTGGGACTGGTTTCTGGTAGTGGCTGTGTGTCCCCACCCCACAGACGCTGACTT--TCTCCCTAAGTCC- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204149890 212 + 204313951 CCGCTTCTCACTTTCTG-----CCCTTCTCTGCTTGCTCAGTGCCCAAGGGAGGCTAAGGGCTGCACCGCA-CCCCTCAGCTTCCCTGCTGCTGCTTCCAGGTGGCCCAGCCTGTGGGAAGAGAGGGGAGTGGTCTCTTCTGGGCTCCCTTGGCTTGGGACAGGTTTCTGGTAGTGGCTGAGTGTCCCCACCC--CAGACCTTGAC-T--TCTTGCTAGGTCT- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11936908 139 + 42124431 ---------------------CCCCTCCTCTGCTTGCTCTGTGCTGGGCCCATGCTGTGGGCTACACAGCATACTC-CGTGTTCCCTGAGGCTGCCTCCAGATGGTCCAGCCAAT----------------------------GCCCCCC--------------------------AC--CTTGCCCCCACCCCAC-------GACCTGCTCTCATTGGGCTCC i canFam3.chr34 C 0 C 0 e mm10.chr13 74323290 262 + 120421639 I a score=1837805.000000 s hg38.chr3_KI270937v1_alt 110936 531 + 165607 ACAATCATCATCTCCTCCCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCAC--AGAGCAACCCTT-CCTTAAGGCTCCTC-TGAACCACCTGCAGGCACTGGATTCTGTTTCCAGCCCGAAGCCCGACTGCTGTCAGAGTGCCTTTTTCAGCGGTGCCTCAAATCTGTCGGGAGTTGATTTAAATCTGGCCTGCTCCTC---CGCGTTCACCATCAGCAAGGCCAGCCCGCAGACCTGGGCGGGGCCGTGTGGGTGCTGGGCTGTGGTGAGAACGAGCTCCACACTGACCTTCCCAGTGCCGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCACCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTGATCATACTCATCAATCTGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATTTCTCATTACTCTAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACCCATTC s panTro4.chr3_GL389630_random 84809 531 - 103936 ACAATCATCATCTCCTCCCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCCGGCCCACACCAC--GGAGCAACCCTT-CCTTAAGGCTCCTC-TGAACCACCTGCAGGCACTGGATTCTGTTTCCAGCCCGAAGCCCGACTGCTGTCAGAGTGCCTTTTTCAGCGGTGCCTCAAATCTGTCCGGAGTTGATTTAAATCTGGCCTGCTCCTC---CGTGTTCACCATCAGCAAGGCCAGCCCGCAGACCTGGGCGGGGCCGTGTGGGTGCTGGGCTGTGGTGAGAAAGAGCTCCACACTGACCTTCCCAGTGCTGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTGATCGTACTCATCGATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATTTCTCATTACTCCAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2439075 533 - 202140232 ACAATCATCATCTCTTCCCCTATCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCAT--GGAGCAACCCTTCCCTTAAGGCTCCTC-TGAATCACCTGCAGGCACTGGATTCTGTTTCCAGCCCGAAGCCTGACTGCTGTCAGAGTGCCTTTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCCTGCTCCTC---CCCGTTCACCATCAGCAAGGCCAGCCCGCAGACCTGGGCGGGGCTGTGTGGGTGCTGGGCTGCGGTGAGAACAAGCTCCACACTGACCTTCCCAGTGCTGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAGGGCTTCTTCTGCTGCCCCTGGATGGGCTTGGAGTGATCGTACTCATTAATCCACACCTGAGGCCAG--------------------ACACACAA--------------TCACATTTCTTATTACTCTAACAGAGCAATACAGA-AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2890475 526 - 123690457 ACA---ATCATCTCCTCCCCTGCCACCAGGCCTTGGACACTTG-CTCCTGCCCAGGGACTTCCATCTGGCCCACACCAC--GGAGCAACCCCT-CCTTAAGGCTCCTC-TGAACCACCTGCAGGCACTGGATTTTGTCTCCAGCCCGAAGCCTGACTGC-GTCAGAGTG-CTTTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCCTGCTCCTC---CCCGTTCACCATCAGCAAGGCCAGCCTGCAGACCTGGGTGGGGCCGTGTGGGTGCTGGGCTGTGGTGAGAACAAGCTCCACACTGACCTTCCCAGTGCTGACGTCCAAATAGGACAGGGTGTGCTTCCTCCAGTGCTTCTCAAAGGGCTTCTTCTGTTTCCCCTCGATGGGCTTGGAGTGATCGCACTCATTAATCCACACCTGACGCCAG--------------------AAACACCA--------------TCACATTTCTCATTACTCTAACAGAGCAACACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180471323 530 - 180491593 ATAATCCTCATCTCCTCCCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCAC--GGAACAGCCCTT-CCTTAAGGCTCCTC-TGAACCACCTGCAGGCGCTGGATTCTGTTTCCAGCCAGAAGCCTGACTGCTGTCAGAG-GCCTTTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCCTGCTCCTC---CCCGTTCACCATCAGCAAGGTCGGCCCGTGAACCTGGGCAGGGCCGTGCGCATTTTGGGTTGTGGTGAGAACGAGCTCCACACTGACCTTCCCAGTGCTGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAAGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCATCAATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATATCTTATTACTCTAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1289708 530 + 181584905 ACAATCCTCATCTCCTCCCCGCTCACCAGGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCAC--GGAGCAGCCCTT-CCTTAAGGCTCCTC-TGAACCACCTGCAGGCGCTGGATTCTGTTTCCAGCCAGAAGCCTGACTGCTGTCAGAG-GCCTTTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCTGGCCTGCTCCTC---CCCGTTCACCATCAGCAAGGTCGGCCCGTGAACCTGGGCAGGGCCGTGCGCATTTTGGGTTGTGGTGAGAACGAGCTCCACACTGACCTTCCCAGTGCTGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAAGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCATCAATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATATCTTATTACTCTAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1260073 531 + 174439528 ACAATCCTCatctcctccccacccaccagGCCTTGGACACTTG-CTCCTGCCCAGTGACTTCCATCTGGCCCACACCAC--GGAGCAGCCCTT-CCTTAAGGCTCCTC-TGAACCACTTGCAGGCGCTGGATTCTGTTTCCAGCCAGAAGCCTGACTGCTGTCAGAGTGCCTTTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCCGGCCTGCTCCTC---CCGGTTCACCATCAGCAAGGTCGGCCTGTGAACCTGGGCGGGGCCATGCGCATTTTGGGCTGTGGTGAGAACGGGCTCCACACTGACCTTCCCAGTGCTGACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCATACTCATCAATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATATCTTATTACTCTAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1383834 530 + 91010382 ACAATCCTCATCTCCTCCCCGC-CACCAGGCCTTGGACACTTG-CTCCTGCCCAGGGACTTCCATCTGGCCCACACCAC--GGAGCAGCCCTT-CCTCAAGGCTCCTC-TGAGCCACCTGCAGGCGCTGGATTCGGTTTCCAGCCAGAAGCCTGACTGCTGTCAGAGTGCCTGTTTCAGTGGTGCCTCAAATCTGTCAGGAGTTGATTTAAATCCGGCCTGCTCCTC---CCGGTTCACCATCAGCAAGGTCAGCCCGCGAACCTGGGCGGGGCCGTGCGCATTTTGGGCTGTGGTGAGAACCAGCTCCACACTGACCTTCCCAGTGCTGACGTCCACGTAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGCTTGGAGTAATCGTACTCATCAATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACGTATCTTATTACTCTAACAGAGCAATACAG--AAAAAACACAGCAAA--CATTAAAATGATCTAAGAGA-------------CAGATGCCCTAGAACTCATTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204150102 515 + 204313951 ACAATCATTGTCTCCTCCCCTGCCACCAGGCCTTGGACACTTG-CTCCTGTCCAGTGACTTCCATTTGGCCCACACCAC--GGAGCAACCCTT-CCT-AAGGCTCCTC-TGAACCACTCACAGGCACTGGATCC-GTTTCTGGCCAGAAGCCTGACTGA---CAGAGTG-CTTTCTCAGTGGTGCCTCACATCTGTCAGT-GCTGGCTTAAATCTGGCCTGCTTCTC---CCCATTCACCATCAGCAAGGCCAGCCTGCAGACCTGGGTGGGGCGGGGC--------GGCTGTGGTGAGAACAAAGTCCACACTGACCTTCCCAGTGCCCACGTCCACATAGGACAGGGTGTGCTTCCTCCAGTGCTCCTCAAAGGGCTTCTTCTGTTGCCCCTGGATGGGTTTGGAGTAATCGTACTCATCAATCCGCACCTGAGGCCAG--------------------AAACACCA--------------TCACATTTCTTATTACTCTAACAGAGCAATACAG---AAAAACACAGCAAA--CATTAAAATGACGTAAGAGA-------------CACATGGCCTAGAACTCATTC i calJac3.chr2 C 0 C 0 s mm10.chr13 74323552 479 + 120421639 ATAGTCACCACTAACTCCCTA--CCACAAGCATCAGACATCTGATTATTGCCCAGTGCTCTTCACCTGGTACAGAAGATGAGAACCAGTCCTA-TACTAAGGGTCCCCGTGAACCACC--CAGGCACTGGTTTCTGTTTCTAGCAAGAAGCATGACTCACGTTA----CTTTTTTTCAGTGATATCTTGGTTCAGTTAACAACTGGTTTAAAACTAGGTTGCTTTCTAAACTGGTCAACCATCA--AAAGCCAAATAGAGTGGCTCAGCACATCC---------CTGGGCTGATGCATG---------CCCACATACCTTGCCAGTCTTGATGTCCACATATGAGAGGGTGTGCTTCCTCCAGTGTTCCCCAAACGGCTTCTTCTGCTGTCCCTGGATGGGCTTGGAGTAATCATACTCATCGACCCGCACCTGAGG-TAA--------------------AAACATAC--------------CTCCATCTCTCAC--------CAGAGAACAACAC--TAAAACCACAGAAAA--TATTAA----------------------------AGATGCACAGACA------- i mm10.chr13 I 262 C 0 s canFam3.chr34 11937047 542 + 42124431 ---AGAATCATCCTCTCCCCTGCCACCAAGCCTTGGGCAC----TCCCTGCCAGGTG--CTACAACTG-------TGGA--AGACCAGCACTT--------------C-TAAACCACCCATCCACACTGGATTCTGTTTCCAA-GAGAAGCCCAAC--------AAGAGTCCTTTTCAGTAGTGTCTCAGGTCTGCCAACAG-GGACTTAAATCCATGTTGCTTCTC---CCAGCCCATCATAAGTTGTACT--CTAGAATATATGGGACGGCACAGTCATTAGTGCATCCGTGAGCAGGACACGTTCCCCACATACCTTCCCAGTCTTGATATCGACGTAGGAAAGGGTGTGCTTTCTCCAGTGCTCCTCAAACGGCTTCTTCTGCTGTCCCTGGATGGGCTTAGAGTAATCATACTCGTCAATCCGCACCTGAGGCCAGGGAAATTAGTTTATTTCAGAAAATACCATCAACAAATACACTTCAAATTTCTTATTTCTCTAATAGGGCAATATAACTGGAAAACATGGCAAACTCATTAAAATGATACATGAGAGACTAGTCTGATGTGAATCCCCTGGATCCCACTC i canFam3.chr34 C 0 I 1614 a score=747185.000000 s hg38.chr3_KI270937v1_alt 111467 276 + 165607 CATTTCCACTTCAGCCCAGGAGGTTGGCACCATCAACACGTTCAGAACCCACAGAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGACATCCTTTATGTACCTA--AGAGTT---TATCAAATAc----tttgtctttttgctccaagcgctgggaga-------ctacctccatcttttctttcagcctgttttta---ttaaAAACA----Ctttttttctcttttgagacagggtctcgctatgtcacctgggct s panTro4.chr3_GL389630_random 85340 275 - 103936 CATTTCCACTTCAGCCCAGGAGGTTGGCACCATCAACACGTTCAGAACCCACAGAGGCCACATGGCTGGCCA-GCGATGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGACATCCTTTATGTACCTA--AGAGTT---TATCAAATAc----tttgtctttttgctccaagcgctgggaga-------ctacctccatcttttctttcagcctgttttta---ttaaAAACA----Cttttttt-tcttttgagacagggtctcgctatgtcacctgggct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2439608 274 - 202140232 CATTTCCA-TTCAGCCCAGGAGGCTGGCGCCATCAACACATTCAGAACCCACAGAGGCCACATGGCTGGCCA-GGGGTGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCATGTCTGCATGTTCCCTTAGACATCCTTTATGTACCTT--AGAGTT---TATCAAATAC----TTTGTCTTTTTGCTCCAAGCGCTGGGAGA-------CTACCTCAATCTTTTCTTTCAGCCTGTTTTAA---TCAAAAATA----tttttttt-tctttggagacagggtctcgctatgtcacctgggct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2891001 272 - 123690457 CATTTCCACTTCAGCCCAGGAGGTTGGCACCATCAACAGGTTCAGAACCCACAGAGGACACATGGGTGGCCA-GGGGTGTGCAGCCAGCAGCGAGTCCAGAGTA----ATCCATGTCCGCATGTTCCCTTAGACATCCTTTATGTACCTA--AGAGTT---TATCAAATAC----TTTGTCTTTTTGCTCCATGCACTAGGAAA-------CTACCTCAATCCTTTCTTTCAGCCTGTTTTTA---TTAAAGAAA----ttttt----tcttttgagacagggtctcgctatgtcacctgggct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180471853 274 - 180491593 CATTTCCACTTCAGCCC-------CGGCACCATCAACATGTTCAGAACCCAAGGAGGCCACATGGCTGGTCAGGGGGTGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGACACCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTCTTTCTGCTGCATGCGCTGGGAGACTACCTACTACCTCAATCTTTTCTTTCAGCCTGTTTTTA--TTTAAAAACA----ttttt----tcttttgagacaggctctcgcaatgtcacccaggct i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1290238 274 + 181584905 CATTTCCACTTCAGCCC-------CGGCACCATCAACATGTTCAGAACCCAAGGAGGCCACATGGCTGGTCAGGGGGTGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCGTGTCCGCACGTTCCCTTAGACACCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTCTTTCTGCTGCATGCGCTGGGAGACTACCTACTACCTCAATCTTTTCTTTCAGCCTGTTTTTA--TTTAAAAACA----ttttt----tcttttgagataggctctcgcaatgtcacccaggct i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1260604 274 + 174439528 CATTTCCACTTCAGCCC-------TGGCACCATCAACATGTTCAGAACCCACGGAGGCCACATGGCTGGCCAGGGGGTGTGCAGCCAGCAGTGAGTCCAGAGTA----ATCCATGTCCGCACGTTCCCTTAAACTCCCTTTATGTACCTA--AGAGTT---TACCAAATAC----TTTGTCTTTCTGGTGCATGCGCTGGGAGACTACCTTCTACCTCAATCttttctttcagcctgttttta--tttaaaaaca----ttttt----tcttttgagacaggctctcactatgtcacctgggct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1384364 278 + 91010382 CATTTCCACATCAGCCC-------CGGCACCATCAACATGTTCAGAACCCACGGAGGCCACATGGCTGGCCAGGGGGTGTGCAGCCAGCAGTGAGTCCAGAGGA----ATCCGTGTCCGCACGTTCCCTCAGACACCCTTTATGTACCTG--AGAGTT---CACCAAATAC----TTTGTCTTTCTGCTGCACGCGCTGGGGGACTACCTACTACCTCCATCTTCTCTTTCAGCCTGTTTTTA--TTTAAAAAAAACttgtttt----tcttttgagacaggctctcgctatgtcacccaggct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204150617 272 + 204313951 CATTTTCACTTCAGCCCAGGAGGCTGGCACCATCAACATGCTCAGAATCCACTGAGGCCACATAGCTGGTCA-GCG--GTGCAGCCAGCAGTGAGTCCAGGGTA----ATCCATGCCTGCATTTTCCCT-AGACATCCTTCATGTACCTA--AGAGTT---TATCAGATAC----TTTGTCTTTTTACCCCATGCTCTGGGTGA-------CCACCTCAATCTTTTCTTTCAGCATGTTTCTATTTTTAAAAAAA----ttctt----tcttttgagacaggatctcgctatgtcacgtgggct i calJac3.chr2 C 0 C 0 s mm10.chr13 74324031 233 + 120421639 ------------AGCCCAGGAAGTAAACACTA----------------------------------TGACAAAGGGCTTTAGAGCCAGGAATG---CAAATGTACAACATCCACTTCTGCATTTTCTCTCACA-GCTCTGTAAGTAGATATTAGAATTAAATATCACTTACGTCATTTTTCCTTTGACTCCATGCACTGAGA---------TTTCGTCAGCTTTTCTCTTCAGC--ATTTTTA--ATTTAAATGG----GCttt----tgttttgagacagggtctctctacattgccctggct i mm10.chr13 C 0 I 581 e canFam3.chr34 11937589 1614 + 42124431 I a score=761325.000000 s hg38.chr3_KI270937v1_alt 111743 298 + 165607 ggagcgcaatggtgtgatcacagctcgccagagccttgacttcccgggctcaatcaatcatcctgcctcagcctcctgagcagctggtacctcaggtgtgtaccaccacgcctggctaatttttta----atttt-tgtagagacaggtttcgccatgttgcccaggctggtctagaactccggggctcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggtgggagccactgcacctggcTTCTATTCTAATTAAAACTCGTTGTCACCAACTAAATTTATGCTCCTggc s panTro4.chr3_GL389630_random 85615 298 - 103936 ggagcgcaatggtgtgatcacagctcgccagggccttgacttcccgggctcaatcactcatcctgcctcagcctcctgagcagctggtacgtcaggtgtgtaccaccacgcctggctaatttttta----atttt-tgtagagacaggtttcgccatgttgcccaggctggtctagaactctggggctcaagtgatttgcctgcctcagcctcccaaatgctgggattacaagtgggagccactgcacctggcTTCTATTCTAATTAAAACTCGTTTTCACCAACTAAATTTATGCTCCTggc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2439882 296 - 202140232 ggagtgcaatggtgtgatcacagttcgccagagccttgacttcccgggctcaatcaattatcctgcctcagccacctgagcagctggtacttcaggcgtgtaccaccacacctggctaatttttta----atttt-tgtagagacaggttttgccatgttgcccaggctggtctagaactct-gggctcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggtgggaatcactgcacctggctTCTATTCTAATTAAAACTCGCTGTCACCAACTAAATTTATGC-ACTggc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2891273 294 - 123690457 ggagtgcaatggtgtgagcacagctcgccggagacttgacttcccaggctcaatc----atcttgcctcagcctcctgagcagctggtacttcaggcatgtaccaccacacctggctaatttttta----atttt-tgtagagacaggtttcgccatgttgcccaggctggtctagaagtctggggctcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggtgggagccactgcacctggcTTCTATTCTAATTAAAACTCATTGTCACCAACTAAATTTATGCTCCTggt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180472127 270 - 180491593 ggagtgcagtggtgtgatcacagcttgctggagccttgactttccaggc----tcaatcatcctgcctcagcctcct------------------gcacgtaccaccacgcctggctaat----------tttttgtgtagagacaggtttcgccatgttgcccaggatggtctagaactcc-aggctcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggcgtgagccactgcacctggcTTCTATTCTAATTAAAACTCATTGTGACCAACTGAATTTATACTACTGGC i rheMac3.chr6 C 0 M 314 s macFas5.chr6 1290512 270 + 181584905 ggagtgcagtggtgtgatcacagcttgctggagccttgacttcccaggc----tcaatcatcctgcctcagcctcct------------------gcacgtaccaccacgcctggctaat----------tttttgtgtagagacaggtttcgccatgttgcccaggctggtctagaactcc-aggctcaagtgatctgcctgcctcagcctcccaaatgctgggattagaggcgtgagccactgcacctggcTTCTATTCTAATTAAAACTCATTGTGACCAACTGAATTTATACTACTggc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1260878 280 + 174439528 ggagtgcagtggtgtgatcacagcttgctggagccttgacttcccgggctcaatcaatcatcctacctcagcctcct------------------gtgcgtaccaccacgcctggctaattattta----tttttttgtagagacaggttttgccatgttgcccaggctggtctagaactcc-aggctcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggtgtgagccactgcacctggcttctatTCTAATTAAAACTTGCTGTGACCAACTGAATTTATGCTACtggc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1384642 280 + 91010382 ggagtgcagtggtgtgatcacagctcgctggagccttgacttccccggctcaatcaatcatcctgcctcagcctcct------------------gtgcgtaccaccacgcctggctaatttttta----tttttgtgtagagacaggtttcgccatgttgcccaggctggtctagaactcc-gggatcaagtgatctgcctgcctcagcctcccaaatgctgggattacaggtgtgagccactgcacctggcTTCTATTCTAATTAAAACTTGTTGTGACCAACTGAATTTATGCTACTggc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204150889 272 + 204313951 ggagtgcagtggtgatatcacagctcactggagccttgacttccca-gctcaatcactcatcctgcctcagcctcctgagcagctgg-----------------------------taattttttattctttttt-tttagagacaggttttgccatgttgcccaagctggtctagaactctggggctcaagtgatctgcctgcctcagcctcccaaatgctgggattataggtgtgagccactgtgcctggcTTATATTCTAATTGAAACTTGCTGTGATCCACTAAATTTATGCTACTggc i calJac3.chr2 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e canFam3.chr34 11937589 1614 + 42124431 I a score=550845.000000 s hg38.chr3_KI270937v1_alt 112041 265 + 165607 caggcacagtggctcatgcctgtaatcctagcactttggaaggccaaggtgggtggttcacttgaggtcgggagttcgagactagcctggccaacatggtgaaaccccgtctttactgaaaatac-aaaattagccgggcacggtggcatgcgcctgtaaccccagctgcttgggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacaat--ga s panTro4.chr3_GL389630_random 85913 264 - 103936 caggcacagtggctcatgcctgtaatcctagcactttggaaggccaaggtgggtggttcacttgaggtcggg-gtttgagaccagcccggccaacatggtgaaaccccatctccactgaaaatac-aaaattagccaggcatggtggcatgcgcctgtaaccccagctgcttgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacaat--ga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440178 265 - 202140232 cgggcacagtggctgatgcctgtaatcctagcactttgggaggccgaggtgggtggttcacttgaggtcaggagttcgagaccagcccagccaacatggtgaaaccctgtctttactgaaaatac-aaaattagccgggaatggtggcacacgcctgtaatcccagctgcttgggaggctgagacaggagaatcacttgtacctgggaggcagagggtgcagtgagctgagatcgcaccactgcactctagcctgggagagagt--ga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2891567 265 - 123690457 caggcacagtggctcctgcctgtaatcctagcactttgggaggccaaggtgggtggttcacttgaggtcaggagttcgagaccagctcggccaacatggtgaaaccccgtctctattgaaaatgc-aaaattagccaggcatggtggcatgcgtctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagctgagatcgcgccgctgcactccagcctgggggacagt--ga i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1290782 262 + 181584905 taggcgcagtggctcacgcctgtaatcctagcactttgggaggttgaggtaggtggttcacttgaggtcacgagttcaagaccagcccggccaacatggtgaaa-cccaactctactgaaaatac-aaaattagccaggcacggtggcgtgcgtctgtaatcccagctgcttgggaggctgaggcaggagaatcacttgaaccctggaggcagagcttgcagtgagctgagattgcgccattgcattccagcctgggggacaga---- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261158 263 + 174439528 gaggcacagtggctcacgcctgcaatcctagcactttgggaggccgaggtgtgtggttcacttgaggtcaggagttcaagaccagcccggccaacatggtgaaaccccaactctactgaaaatag-aaaattagccaggcatggtggcatgcgtctgtaatcccagctgcttgggaagctgaggcaggagaatcacttgaaccctggaggcagagcttgcagtgagctgagattgtgccattgcattccagcctgggggacaga---- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1384922 265 + 91010382 caggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggtgtgtggttcacttgaggtcaggagttcaagaccagcccggccaacatggtgaaaccccaactctactgaaaatac-aaaattagccaggcatggtggcatgcatctgtaatcccacctgcttgggaggctgaggcaggagaatcacttgaacccgggaggcagagcttgcagtgagctgagatcgcgccactgcacttcagcctgggggacagcaa-- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151161 239 + 204313951 agggcacagtggctcacgcctataatcctagcactttgggaagccaaggtgagtggtt---------------------------cctggacaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtgatggtgtgcacctgtagtcctagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaagttgtagtgagccaagatcgcaccactgcactccagcctaggtgacaga--gc i calJac3.chr2 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e canFam3.chr34 11937589 1614 + 42124431 I e rheMac3.chr6 180472397 314 - 180491593 M a score=411827.000000 s hg38.chr3_KI270937v1_alt 112306 150 + 165607 -----gactccatctcaaaaaatt------aaaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAATTCTGAGCAGTGATCACAGCCATCAGCATATTCTA s panTro4.chr3_GL389630_random 86177 156 - 103936 -----gactccatctcaaaaaaataaaaacaaaaataataaaTTTAT--TATTATTCTGTATTCTGGCAAAAACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATTCTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440443 150 - 202140232 -----gactccatctcaaaatatt------aaaaataataaaTTTAT--TATTATTCTGTATCCTGGCAAACACGAATTCATATACTTTGCAGGAAAGACTTTT-AATAAGTACGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATTCTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2891832 156 - 123690457 -----gactccatctcaaaaaaataaaaataaaaacaataaaTTTAT--TATTATTCTGTATTCTGGCAAAGACGGATTCATATACTTTGCAGGAAAGACTCTT-AATATGTATGAGGAGAC--GAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180472711 157 - 180491593 -----GACTCCATCTCaaaaaaataaaaataaaa-tgataaatttat--tattattCTGTATTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCCGAGCAGTGATCACAGCCATCAGCATATTCCA i rheMac3.chr6 M 314 C 0 s macFas5.chr6 1291044 158 + 181584905 -----gactccatctcaaaaaaataaaaataaaaGTGATAAATTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTCCGAGCAGTGATCACAGCCATCAGCATATTCCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261421 152 + 174439528 -----gactccatctcaaaaaaataaaaa------taataaatttat--tattattctgtatTCTGGCAAACACGGATTCATATACTTCGCAGGAAAGACTCTT-AATATGTACAAGGAGGCAAGAGCAAGTTTCGAGCAGTGATTACAGCCATCAGCATATTCCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385187 159 + 91010382 -----gacttcatctcaaaaaaataaaaataaaaattaaaaaTTTAT--TATTATTCTGTATTCTGGCAAACACGGATTCATATACTTTGCAGGAAAGACTCTTAAATATGTACAAGGAGGCAAGAGCAAGTTCTGAGCAGTGATCACAGCCATCAGCATATTCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151400 158 + 204313951 gagactacttcatctcaaaaa-----taataataataataaaTGTATGCTACTA-TCTGTATTCTGGCAAACACGGATTCATGTACTTTGCAGGAAAGACTCTT-ACACTGTACAAGGAGGA-AGAACAAGTTCTGAGCAGGGACTACAGCCATCAGCATATTCTA i calJac3.chr2 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e canFam3.chr34 11937589 1614 + 42124431 I a score=175165.000000 s hg38.chr3_KI270937v1_alt 112456 62 + 165607 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAA--------------------TGATTTTCCCATTCACTGTGTTC- s panTro4.chr3_GL389630_random 86333 62 - 103936 GTGGAGGGTAAATCAGTAAAATTTCATGGTCAATAAAAA--------------------TGATTTTCCCATTCACCGTGTTC- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440593 62 - 202140232 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAA--------------------TGATTTTCCCATTCACTATGTTC- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2891988 62 - 123690457 GTGGAGGGTAAATCAGTAAAATTTCATGGTGAATAAAAA--------------------TGATTTTCCCATTCACCGTGTTC- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180472868 61 - 180491593 GTGGAGGGTAAATCGGTGAAATTTCATGGTGAATAAAAA--------------------TGA-TCTCCCACTCACCGCGCTC- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291202 61 + 181584905 GTGGAGGGTAAATCGGTGAAATTTCATGGTGAATAAAAA--------------------TGA-TTTCCCACTCACCGCGCTC- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261573 61 + 174439528 GTGGAGGGTAAATCGGTAAAATTTCATGGTGAATAAAAA--------------------TGA-TTTCCCACTCACCGTGTTC- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385346 61 + 91010382 GTGGAGGGTAAATCGGTAAAATTTCATGGTGAATAAAAA--------------------TGA-TTTCCCACTCACCGTGCTC- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151558 62 + 204313951 GTGGAGGCTACATCAGTACCATTTCACAGTAAACACAAG--------------------TCATTTTCCCATTCACTGTGTTC- i calJac3.chr2 C 0 I 199 s canFam3.chr34 11939203 83 + 42124431 GTGGAGGGCAAATTAACAGAATTTCACTGTAAATCAGAACCTAATCCTCTTCCTGTAGCCAATTTCCCCATGTGCTTCTGTCC i canFam3.chr34 I 1614 C 0 e mm10.chr13 74324264 581 + 120421639 I a score=193722.000000 s hg38.chr3_KI270937v1_alt 112518 80 + 165607 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGCCCTGAACC--AGCCTGTGCGCCTGCCTTGTGGAGCCTTTGTC s panTro4.chr3_GL389630_random 86395 80 - 103936 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACATGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCCTTTGTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440655 80 - 202140232 AGCTGACTGGAAAGGCTGCCACCAGCCGCCCACACAGGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCCTTTGTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892050 78 - 123690457 AGCTGACTGGAAAGGCTGCCACCAGCTGCCCACACA--GTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGGAGCCTTTGTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180472929 80 - 180491593 GGCGGGCTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGCGTGCCTGCCTCGTGCAGCCTTTGTC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291263 80 + 181584905 AGCGGGCTGGAAAGGTCACCAGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCTCGTGCAGCCTTTGTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261634 80 + 174439528 AGCTGACTGGAAAGGCCGCCAGCAGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCTTGTGCAGCCTTTGTC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385407 80 + 91010382 AGCTGACTGGAAAGGCTGCCGGCCGCCGCCCACACACGGTCCTGAACC--AGCCTGTGTGCCTGCCTCGTGCAGCCTTTGTC i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11939286 78 + 42124431 TGCTGATGGACGAGGCTGCTACCAGCAACAT-CACCTGGTCCTGGGCCAGAGCCTGTGTGTCTGGAAAGCGG---CTCAGGC i canFam3.chr34 C 0 C 0 e mm10.chr13 74324264 581 + 120421639 I e calJac3.chr2 204151620 199 + 204313951 I a score=395833.000000 s hg38.chr3_KI270937v1_alt 112598 148 + 165607 CTTTTGCCGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTCG-TTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCATCTGAAGAACAAGT s panTro4.chr3_GL389630_random 86475 149 - 103936 CTTTTGCCGATGTGGTTTATCCTGAACTTGCATTTGCACCCCAAGCTTCCCTTTCCGTCGTTTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCATCTGAAGAACAAGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440735 148 - 202140232 CTTTTGCTGATGTGGTTTATCCTGAACCTGCATTTGCACTGCAAGCTTCCCTTTCCGTGG-TTTTTTGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTACATAAAAATCAGTTCATCTGAAGAACAAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892128 148 - 123690457 CTTTTGCTGATGTGGTTTATCCGGAACTTGCATTTGCACCCCAAGCTTCCCTTTCTGTGG-TTTTTTGCTATCATATGTGAAAAACTCTTAGCAGGCAGAATCCAACATGTGTGCTCTGCACAAAAATCAGTTCATCTGAAGAACAAGT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473009 148 - 180491593 CTTTCGCGGATGTGCTTTATCCTGAACCTGCATTTGTGCCCCGAGCTTCCCTTTCCGTGT-TTTTCTGCTATCGTATGTGAGAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCACCTGAAGAACAAGT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291343 148 + 181584905 CTTTCGCTGATGTGCTTTATCCTGAACCTGCATTTGTGCCCCGAGCTTCCCTTTCCGTGT-TTTTCTGCTATCGTATGTGAGAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCACCTGAAGAACAAGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261714 148 + 174439528 CTTTTGCTGATGTGGTTTATCCTGAACTTGCATTTGTTCCCCAAGCTTCCCTTTCCGTGt-ttttttGCTATCGTATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCACCTGAAGAACAAGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385487 140 + 91010382 CTTTTGCTGATGTGGTTTATCCTGAACTTGCATTTGTACCCCAAGCTTCCCTTTCCG---------TGCTATCATATGTGAAAAACTCTTACCAGGCAGAATCCAACACGTGTGCTCTGCACAAAAATCAGTTCACCTGAAGAACAAGT i chlSab2.chr4 C 0 C 0 s mm10.chr13 74324845 122 + 120421639 CTCTAGTTGATGTG-TTCATCCTGAACTTGGAGCTACACC-CAAGCTTCTTGT------G-TTTTTTACCACCACATGT------------------AGAATCCAACTTGTGTGTTCTGTACAGACAACAGTTTGCATAAAAACCATGG i mm10.chr13 I 581 C 0 s canFam3.chr34 11939364 140 + 42124431 --CTTGCTGATGT--TGCATCCTGAAGTTGTATTTG-GCCTCAAGTGCCTATTTCCTTCC-CATTTTCCTGTCATACGC-TGAGTCTCTGTTCTGGAAGAATCTGAAC--TGTACTCTGCATAAAAATCATGTAATTTATGGGGCACCT i canFam3.chr34 C 0 C 0 e calJac3.chr2 204151620 199 + 204313951 I a score=7497.000000 s hg38.chr3_KI270937v1_alt 112746 2 + 165607 GA s panTro4.chr3_GL389630_random 86624 2 - 103936 GA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440883 2 - 202140232 GA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892276 2 - 123690457 GA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473157 2 - 180491593 GA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291491 2 + 181584905 GA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261862 2 + 174439528 GA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385627 2 + 91010382 GA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151819 2 + 204313951 GA i calJac3.chr2 I 199 C 0 s canFam3.chr34 11939504 2 + 42124431 gg i canFam3.chr34 C 0 I 134 e mm10.chr13 74324967 0 + 120421639 C a score=90881.000000 s hg38.chr3_KI270937v1_alt 112748 58 + 165607 CCACAGGGCAGTCTCCGTAATCAAACCACAGGACAGGCTCTATAATACCTTTTCCAAA s panTro4.chr3_GL389630_random 86626 58 - 103936 CCACAGGGCAGGCTCCGTAATCAAACCACAGGACAGGCTCTATAATACCTTTTCCAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440885 58 - 202140232 CCACAGGGCAGGCTCCATAATCAAACCACAGGGCAGGCTCTATAATACCTTTTCCAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892278 33 - 123690457 CCACAGGG-------------------------CAGGCTCTATAATACCTTTTCCAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473159 33 - 180491593 CCACAGGG-------------------------CAGGCTCTATAACACCTTTTCCAAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291493 33 + 181584905 CCACAGGG-------------------------CAGGCTCTATAATACCTTTTCCAAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261864 33 + 174439528 CCACAGGG-------------------------CAGGCTCTATAATACCTTTTCCAAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385629 33 + 91010382 CCACAGGG-------------------------CAGGCTCTATAATACCTTTTCCAAA i chlSab2.chr4 C 0 I 78 s calJac3.chr2 204151821 48 + 204313951 CCCCAGGGCAGGTCACCCAAGTG----------CAGGAGCTACAACACCTTTCCCAGA i calJac3.chr2 C 0 C 0 s mm10.chr13 74324967 30 + 120421639 ---CAAGG-------------------------GCAGATCTCCAATTCCTTTTCCAAG i mm10.chr13 C 0 C 0 e canFam3.chr34 11939506 134 + 42124431 I a score=18737.000000 s hg38.chr3_KI270937v1_alt 112806 7 + 165607 CCACAGG s panTro4.chr3_GL389630_random 86684 7 - 103936 CCACAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440943 7 - 202140232 CCACAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892311 7 - 123690457 CCACAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473192 7 - 180491593 CCACAGG i rheMac3.chr6 C 0 I 20 s macFas5.chr6 1291526 7 + 181584905 CCACAGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261897 7 + 174439528 CCACAGG i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204151869 7 + 204313951 CCCCAGG i calJac3.chr2 C 0 C 0 s mm10.chr13 74324997 7 + 120421639 CCTCAAT i mm10.chr13 C 0 C 0 e canFam3.chr34 11939506 134 + 42124431 I e chlSab2.chr4 1385662 78 + 91010382 I a score=13292.000000 s hg38.chr3_KI270937v1_alt 112813 6 + 165607 ACAGGT s panTro4.chr3_GL389630_random 86691 6 - 103936 ACAGGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440950 6 - 202140232 ACAGGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892318 6 - 123690457 GCAGGT i nomLeu3.chr11 C 0 I 57 s macFas5.chr6 1291533 6 + 181584905 GCAGGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261904 6 + 174439528 GCAGGT i papAnu2.chr6 C 0 T 13 s calJac3.chr2 204151876 6 + 204313951 GCGGGT i calJac3.chr2 C 0 C 0 s mm10.chr13 74325004 6 + 120421639 ACAGGT i mm10.chr13 C 0 C 0 e canFam3.chr34 11939506 134 + 42124431 I e chlSab2.chr4 1385662 78 + 91010382 I e rheMac3.chr6 180473199 20 - 180491593 I a score=-3427.000000 s hg38.chr3_KI270937v1_alt 112819 2 + 165607 -TG s panTro4.chr3_GL389630_random 86697 2 - 103936 -TT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440956 2 - 202140232 -TT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892381 2 - 123690457 -TT i nomLeu3.chr11 I 57 C 0 s calJac3.chr2 204151882 1 + 204313951 --C i calJac3.chr2 C 0 I 21 s mm10.chr13 74325010 2 + 120421639 CT- i mm10.chr13 C 0 C 0 e canFam3.chr34 11939506 134 + 42124431 I e chlSab2.chr4 1385662 78 + 91010382 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C e rheMac3.chr6 180473199 20 - 180491593 I a score=1309.000000 s hg38.chr3_KI270937v1_alt 112821 6 + 165607 GAAACA s panTro4.chr3_GL389630_random 86699 6 - 103936 GAAACA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440958 6 - 202140232 GAAACA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892383 6 - 123690457 GAAATG i nomLeu3.chr11 C 0 C 0 s mm10.chr13 74325012 2 + 120421639 GA---- i mm10.chr13 C 0 C 0 e calJac3.chr2 204151883 21 + 204313951 I e canFam3.chr34 11939506 134 + 42124431 I e chlSab2.chr4 1385662 78 + 91010382 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C e rheMac3.chr6 180473199 20 - 180491593 I a score=5820.000000 s hg38.chr3_KI270937v1_alt 112827 6 + 165607 GTGGCT s panTro4.chr3_GL389630_random 86705 6 - 103936 GTGGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440964 6 - 202140232 GTGGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892389 6 - 123690457 GTGGCT i nomLeu3.chr11 C 0 C 0 s chlSab2.chr4 1385740 6 + 91010382 GTGGCT i chlSab2.chr4 I 78 C 0 e mm10.chr13 74325014 0 + 120421639 C e calJac3.chr2 204151883 21 + 204313951 I e canFam3.chr34 11939506 134 + 42124431 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C e rheMac3.chr6 180473199 20 - 180491593 I a score=16883.000000 s hg38.chr3_KI270937v1_alt 112833 14 + 165607 TACTCGTTATTTAG s panTro4.chr3_GL389630_random 86711 14 - 103936 TACTCGTTATTTAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440970 14 - 202140232 TACTCGTTATTTAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892395 14 - 123690457 TACTCATTATTTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473219 14 - 180491593 TACTCGTTACTTAA i rheMac3.chr6 I 20 C 0 s chlSab2.chr4 1385746 14 + 91010382 TACTTGTTATTTAA i chlSab2.chr4 C 0 C 0 s mm10.chr13 74325014 8 + 120421639 ------TGACTCAA i mm10.chr13 C 0 C 0 e calJac3.chr2 204151883 21 + 204313951 I e canFam3.chr34 11939506 134 + 42124431 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C a score=6450.000000 s hg38.chr3_KI270937v1_alt 112847 6 + 165607 TAAACT s panTro4.chr3_GL389630_random 86725 6 - 103936 TAAACT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892409 6 - 123690457 TAAACT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473233 6 - 180491593 TAAACT i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 1385760 6 + 91010382 TAAACT i chlSab2.chr4 C 0 C 0 s mm10.chr13 74325022 6 + 120421639 TAAGTC i mm10.chr13 C 0 C 0 e ponAbe2.chr3 2440984 0 - 202140232 C e calJac3.chr2 204151883 21 + 204313951 I e canFam3.chr34 11939506 134 + 42124431 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C a score=15237.000000 s hg38.chr3_KI270937v1_alt 112853 10 + 165607 GGCATTTCCT s panTro4.chr3_GL389630_random 86731 10 - 103936 GGCATTTCCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892415 10 - 123690457 GGCATTTACT i nomLeu3.chr11 C 0 T 114 s rheMac3.chr6 180473239 10 - 180491593 GGCATTTCCT i rheMac3.chr6 C 0 C 0 s chlSab2.chr4 1385766 10 + 91010382 GGCATTTCCT i chlSab2.chr4 C 0 T 114 s calJac3.chr2 204151904 10 + 204313951 GACCTTTCCC i calJac3.chr2 I 21 I 3 s mm10.chr13 74325028 10 + 120421639 AGCATTTCCT i mm10.chr13 C 0 I 1716 e ponAbe2.chr3 2440984 0 - 202140232 C e canFam3.chr34 11939506 134 + 42124431 I e papAnu2.chr6 1261910 13 + 174439528 T e macFas5.chr6 1291539 0 + 181584905 C a score=12306.000000 s hg38.chr3_KI270937v1_alt 112863 7 + 165607 CCACAAG s panTro4.chr3_GL389630_random 86741 7 - 103936 CCACAGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892311 7 - 123690457 CCACAGG i nomLeu3.chr11 T 114 C 0 s rheMac3.chr6 180473249 7 - 180491593 CCACAGG i rheMac3.chr6 C 0 T 57 s papAnu2.chr6 1261897 7 + 174439528 CCACAGG i papAnu2.chr6 T 13 C 0 s chlSab2.chr4 1385662 7 + 91010382 CCACAGG i chlSab2.chr4 T 114 C 0 s calJac3.chr2 204151917 7 + 204313951 CCCCAGG i calJac3.chr2 I 3 C 0 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I e macFas5.chr6 1291539 0 + 181584905 C a score=54769.000000 s hg38.chr3_KI270937v1_alt 112870 47 + 165607 GCAGGTCTGAAACGGTGACTTACTTGTTATTTAATAAACTGG-CATTT s panTro4.chr3_GL389630_random 86748 18 - 103936 GCAGGTCTGAAACGGTGA------------------------------ i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892318 47 - 123690457 GCAGGTCTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473199 47 - 180491593 GCAGGTCTGAAACGGTGGCTTACTCGTTACTTAATAAACTGG-CATTT i rheMac3.chr6 T 57 C 0 s papAnu2.chr6 1261904 48 + 174439528 GCAGGTCTGAAACAGTGGCTTACTTGTTATTTAATAAACTGGCCATTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385669 47 + 91010382 GCAGGTCTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151924 47 + 204313951 GCAGGTCTGAAAGGATGACTGACTCATTCTTTAAGAAACTAG-CATTT i calJac3.chr2 C 0 T 54 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I e macFas5.chr6 1291539 0 + 181584905 C a score=2910.000000 s hg38.chr3_KI270937v1_alt 112917 3 + 165607 CCT s nomLeu3.chr11 2892365 3 - 123690457 CCT i nomLeu3.chr11 C 0 T 57 s rheMac3.chr6 180473246 3 - 180491593 CCT i rheMac3.chr6 C 0 C 0 s papAnu2.chr6 1261952 3 + 174439528 CCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385716 3 + 91010382 CCT i chlSab2.chr4 C 0 T 57 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e calJac3.chr2 204151971 54 + 204313951 T e canFam3.chr34 11939506 134 + 42124431 I e macFas5.chr6 1291539 0 + 181584905 C e panTro4.chr3_GL389630_random 86766 0 - 103936 C a score=17325.000000 s hg38.chr3_KI270937v1_alt 112920 13 + 165607 CCACAGGGCAGGC s nomLeu3.chr11 2892311 13 - 123690457 CCACAGGGCAGGT i nomLeu3.chr11 T 57 C 0 s rheMac3.chr6 180473249 13 - 180491593 CCACAGGGCAGGT i rheMac3.chr6 C 0 C 0 s papAnu2.chr6 1261955 13 + 174439528 CCACAGGGCAGGT i papAnu2.chr6 C 0 T 58 s chlSab2.chr4 1385662 13 + 91010382 CCACAGGGCAGGT i chlSab2.chr4 T 57 C 0 s calJac3.chr2 204151917 13 + 204313951 CCCCAGGGCAGGT i calJac3.chr2 T 54 C 0 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I e macFas5.chr6 1291539 0 + 181584905 C e panTro4.chr3_GL389630_random 86766 0 - 103936 C a score=90377.000000 s hg38.chr3_KI270937v1_alt 112933 44 + 165607 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTTCCT s panTro4.chr3_GL389630_random 86766 32 - 103936 ------------CTTACTCGTTATTTAATAAACTGG-CATTTCCT i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892324 44 - 123690457 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTTCCT i nomLeu3.chr11 C 0 T 57 s rheMac3.chr6 180473262 44 - 180491593 CTGAAACGGTGGCTTACTCGTTACTTAATAAACTGG-CATTTCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291539 44 + 181584905 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTTCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261910 45 + 174439528 CTGAAACAGTGGCTTACTTGTTATTTAATAAACTGGCCATTTCCT i papAnu2.chr6 T 58 C 0 s chlSab2.chr4 1385675 44 + 91010382 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGG-CATTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151930 44 + 204313951 CTGAAAGGATGACTGACTCATTCTTTAAGAAACTAG-CATTTCCT i calJac3.chr2 C 0 T 57 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I a score=90333.000000 s hg38.chr3_KI270937v1_alt 112977 41 + 165607 CCACAGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAA s panTro4.chr3_GL389630_random 86798 41 - 103936 CCACAGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAA i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2892311 41 - 123690457 CCACAGGGCAGGTCTGAAACGGTGGCTTACTCGTTATTTAA i nomLeu3.chr11 T 57 C 0 s rheMac3.chr6 180473306 41 - 180491593 CCACAGGGCAGGTCTGAAACGGTGGCTTACTCGTTACTTAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291583 41 + 181584905 CCTTAGGGCAGGTCTGAAACGGTGGCTTACTCGTTGTTTAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261955 41 + 174439528 CCACAGGGCAGGTCTGAAACGGTGGCTTACTTGTTATTTAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385719 41 + 91010382 CCTTAGGGCAGGTCTGAAATGGTGGCTTACTTGTTATTTAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151917 41 + 204313951 CCCCAGGGCAGGTCTGAAAGGATGACTGACTCATTCTTTAA i calJac3.chr2 T 57 C 0 e ponAbe2.chr3 2440984 0 - 202140232 C e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I a score=47184.000000 s hg38.chr3_KI270937v1_alt 113018 16 + 165607 TAAACTGG-CATTTCCT s panTro4.chr3_GL389630_random 86839 16 - 103936 TAAACTGG-CATTTCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2440984 16 - 202140232 TAAACTGG-CATTTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892352 16 - 123690457 TAAACTGG-CATTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473347 16 - 180491593 TAAACTGG-CATTTCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291624 16 + 181584905 TAAACTGG-CATTTCTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1261996 17 + 174439528 TAAACTGGCCATTTCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385760 16 + 91010382 TAAACTGG-CATTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151958 16 + 204313951 GAAACTAG-CATTTCCT i calJac3.chr2 C 0 T 57 e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I a score=33992.000000 s hg38.chr3_KI270937v1_alt 113034 13 + 165607 CCACAGGGCAGGC s panTro4.chr3_GL389630_random 86855 13 - 103936 CCACAGGCCAGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441000 13 - 202140232 CCACAGGGCAGCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892368 13 - 123690457 CCACAGGGCAGGT i nomLeu3.chr11 C 0 T 57 s rheMac3.chr6 180473363 13 - 180491593 CCACAGGGCAGGT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291640 13 + 181584905 CCACAGGGCAGGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262013 13 + 174439528 CCTTCGGGCAGGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385776 13 + 91010382 CCACAGGGCAGGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151917 13 + 204313951 CCCCAGGGCAGGT i calJac3.chr2 T 57 C 0 e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I a score=123504.000000 s hg38.chr3_KI270937v1_alt 113047 44 + 165607 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT s panTro4.chr3_GL389630_random 86868 44 - 103936 TTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441013 40 - 202140232 CTGAAACAGTGACTTGCTCA----TTAATAAACTGGCATTTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892324 44 - 123690457 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i nomLeu3.chr11 T 57 C 0 s rheMac3.chr6 180473376 44 - 180491593 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291653 44 + 181584905 CTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262026 44 + 174439528 TTGAAACGGTGGCTTACTCCTTATTTAATAAACTGGCATTTCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385789 44 + 91010382 CTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151930 44 + 204313951 CTGAAAGGATGACTGACTCATTCTTTAAGAAACTAGCATTTCCT i calJac3.chr2 C 0 T 3 e mm10.chr13 74325038 1716 + 120421639 I e canFam3.chr34 11939506 134 + 42124431 I a score=5469.000000 s hg38.chr3_KI270937v1_alt 113091 4 + 165607 CCAT s panTro4.chr3_GL389630_random 86912 4 - 103936 CCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441053 4 - 202140232 CCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892368 4 - 123690457 CCAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473420 4 - 180491593 CCTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291697 4 + 181584905 CCTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262070 4 + 174439528 CCTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385833 4 + 91010382 CCTT i chlSab2.chr4 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I e calJac3.chr2 204151974 3 + 204313951 T e canFam3.chr34 11939506 134 + 42124431 I a score=130202.000000 s hg38.chr3_KI270937v1_alt 113095 54 + 165607 AGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTATTT s panTro4.chr3_GL389630_random 86916 54 - 103936 AGGGCAGGCTTGAAACGGTGGCTTACTCGTTATTTAATAAACTGGCATTTATTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441057 53 - 202140232 A-GGCAGGTTCGAAACGGTGGCTTACTCATTATTTAATAAACTGGCATTTATTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892372 54 - 123690457 AGGGCAGGTTTGAAATGGTGGCTTACTCATTATTTAATAAACTGGCATTTACTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473424 54 - 180491593 AGGGCACATTTGAAACGGTGGCTTACTCGTTACTTAATAAACTGGCATTTATTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291701 54 + 181584905 AGGGCAGGTCTGAAACGGTAGCTTACTCGTTATTTAATAAACTGGCATTTATTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262074 54 + 174439528 AGGGCAGGTTTGAAACGGTGGCTTAATCGTTATTTAATAAACTGGCATTTATTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385837 54 + 91010382 AGGGCAGGTTTGAAACGGTGGCTTACCCGTTATTAAATAAACTGGCATTTATTT i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11939640 43 + 42124431 AAGTCAGGTCTCAAATAATGATTTATCTCTCATTTTA-----------CTATTT i canFam3.chr34 I 134 C 0 e mm10.chr13 74325038 1716 + 120421639 I e calJac3.chr2 204151974 3 + 204313951 T a score=49392.000000 s hg38.chr3_KI270937v1_alt 113149 15 + 165607 CCTGGTCATGCCACG s panTro4.chr3_GL389630_random 86970 15 - 103936 CCTGGTCATGCCATG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441110 15 - 202140232 CCTGGTCATGCCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892426 15 - 123690457 CCTGGTCATGACACT i nomLeu3.chr11 C 0 I 302 s rheMac3.chr6 180473478 15 - 180491593 CCTGGTCATGCCACT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291755 15 + 181584905 CCTGGTCATGCCACT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262128 15 + 174439528 CCTGGTCATGCCACT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385891 15 + 91010382 CCTGGTCATGCCACT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151971 15 + 204313951 CCTGGCCATGCTACT i calJac3.chr2 T 3 C 0 s canFam3.chr34 11939683 15 + 42124431 TCTGGCTATAGTACT i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I a score=251180.000000 s hg38.chr3_KI270937v1_alt 113164 77 + 165607 CTGGCTGCACTTCTAACCTTGGCCTTCTAACAGCAAAGCACATTGGCTTGGAGATGCCACTGCTGGCATCAGTGGAT s panTro4.chr3_GL389630_random 86985 77 - 103936 CTGGCTGCACTTCTAACCTTGGCCTTCTAACAGCAAAGCACATTGGCTTGGAGATGCCACTGCTGGCATCAGTGGAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441125 77 - 202140232 CTGGCTGCACTTCTAATCTTGGCCTTCTAACAGCAAAGCACACTGGCTTGGAGATGCCACTGCTGGCATCAGTGGAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892743 77 - 123690457 CTGGCTGCACTTCTAACCTTGGCCTTCTAACAGCAAATCACATTGGCTTGGAGATGCCACTGCTGGCATCAGTGGAC i nomLeu3.chr11 I 302 C 0 s rheMac3.chr6 180473493 77 - 180491593 CTGGCTGCACTTCTAAACTTGGCCTTCTAACAGCAAAGCACATTGGCTTGGAGATGCCACTGCTGCCATCAGTGGAC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291770 77 + 181584905 CTGGCTGCACTTCTAAACTTGGCCTTCTAACAGCAAAGCACATTGGCTTGGAGATGCCACTGCTGCCATCAGTGGAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262143 77 + 174439528 CTGGCTGCACTTCTAAACTTGGCCTTCTAACAGCAAAGCGCATTGGCTTGGAGATGCCACTGCTGCCATCAGCGGAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385906 77 + 91010382 CTGGCTGCACTTCTAACCTTGGCCTTCTAACAGCAAAGCACATTGGCTTGGAGATGCCACTGCTGCTATCAGTGGAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204151986 77 + 204313951 CCGGCTGCACTGCTAACCTTGGCCCTCTAACTGCAGAGCACTTTGGCTTGGAGATGCCACTGCTGGCATCAGTGGCC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11939698 76 + 42124431 CAGACTGCA-TACTAATCTTTGATCTGGTAAGTCAGGTGTGTTTTGCTTAGAGATGCTCCTACTGGCAGCAGCAAAT i canFam3.chr34 C 0 C 0 e mm10.chr13 74325038 1716 + 120421639 I a score=1170153.000000 s hg38.chr3_KI270937v1_alt 113241 312 + 165607 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGCGAGAACCCAGGGATCAAAGTTACCAGA--------------GGGAAAAAGGCATTTTTTG--GATATACTTTTGGGGAAACGACATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG---GCGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCCGGCGTGCGCGCCCCGTGACTCCTTCCCCGCCTCTGCTCCATTGACGGTCTGCAGCGCACATAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC s panTro4.chr3_GL389630_random 87062 312 - 103936 GCCGACCCAAAGCAAGGAACAGGTCACAGTGATCCAGAAAATGGCGAGAACCCAGGGATCAAAGTTACCAGG--------------GGGAAAAAGGCATTTTTTG--GATTTACTTTTGGGGAAACGACATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCCACCAGGCGGGAGGAAAAGGCAGGTGCAGGTGG---GCGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGCGCGCCCCGTGACTCCTTCCACGCCTCTGCTCCACTGACGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441202 312 - 202140232 GCCGACCAAAAGCAAGGAAAAGGTCACAGTGGTCCAGAAAATGGTGAGAACCCAGAGATCAAAGTTACCAGG--------------GGGAAAAAGGCATGTTTTG--GATTTACTTTTGGGGAAATGAAATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTGCCACCAGGCAGGAGGAAAAGGCAGGTGCTGGTGG---GCGTGGAGAGAAGGCTCACCTTGTATTCTTCCCTGGCGTGCACGCCCCGTGACTCCTTCCGCGCCTCTGCTCCATTGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGTTCTCCACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2892820 311 - 123690457 GCTGACCCAAAGCAAGGAA-AGGTTGCAGTGATCCAGAAGATGGCGAGAACCCAGGGATCAAAGTTACCAGG--------------GGGAAGAAAGCATTTTTTG--GATTTACTTTTGGGGAAACGAAATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCACCCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG---GTGTGGTGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCACGCCTCTGCTCCACTGATGGTCTGCGGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473570 312 - 180491593 GCTGACCCAAAGCAAGGAAAAGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAGAGTTACCAGG--------------GGGAAAAAGGCGTTTTTTG--GATTTACTTTTGGGGAAATGAAATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG---GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1291847 312 + 181584905 GGTGACCTAAAGCAAGGAAAAGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAAAGTTACCAGG--------------GGGAAAAAGGCGTTTTTTG--GATTTACTTTTGGGGAAATGAAATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG---GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262220 312 + 174439528 GCTGACCCAAAGCAAGGAAAAGGTCACAGTGATCCAGAGGATGGCGGGAACCCAGGGATCAAAGTTACCAGG--------------GGGAAAAAGGCGTTTTTTG--GATTTACTTTtggggaaatgaaataaaatgcagagaaaatgCAGAGGT-GGGG-CTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG---GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGTGCGCCCCATGACTCCTTCCGCGCCTCTGCTCCATAGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1385983 312 + 91010382 ACTGACCCAAAGCAAGAAAAAGGTCACAGTGATCCAGAGGATGGTGGGAACCCAGGGATCAAAGTTACCAGG--------------GGGAAAAAGGCATTTTTTG--GATTTACTGTTGGGGAAATGAAATAAAATGCAGAGAAAATGCAGGGGT-GGGG-CTGAGTCCCACCAGGTGGGAGGAAAAGGCAGGTGCAGGTGG---GTGTGGCGAGAAGGCGCACCTTGTAGTCTTCCCTGGCGTGGGCGCCCCGTGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204152063 292 + 204313951 ACTGACCCAAGGCAAAGCAAAGGT--CAGTGTTGCAGAAGACGGCGAGAACC------------------AG--------------GGGGAAAAGGCACTTTCTG--GATTTACTTTTGGGGAAATGGAATGAAATGCAGAGAAAATGCAGGGGT-GGGG-TTGAGTCACACAAGATGGGAGAAAGCGGCAGGTGCAGGTGG---GTGTGGCCAGAAGGCGCACCTTGTAGTCTTCTCTGGCGTGCGCGCCCCGCGACTCCTTCCGCGCCTCTGCTCCGTAGATGGTCTGCAGCGCACACAGCATCAGGTTCTGCAGCTCCAGGGTCTCCACC i calJac3.chr2 C 0 M 577 s mm10.chr13 74326754 281 + 120421639 GCTAACTCAAAACAAGAAAAAGGT--CTGAGAGTAAGAATATGA-------------ATAAAAGATATT-GA--------------AGGAAAAAGTGTTCTCCTT--GATTTTGTTTTGGGAAAAT-AAATGAAGCACAGAAAGCAAGCAGGGAT-GAGACCTGGGTGC-------------GCAACGTCAGGTCAAGGTGGCGCATCTGG-----AGACATACTTTGTAATCTTCCCTGGCATGGGCTCCCCGGGACTCCTTCCGAGCTTCTGCACCATATATGGTCTGCAGTGCGCACAGCATCAGATTCTGCAGCTCCAGGGTCTCCACC i mm10.chr13 I 1716 C 0 s canFam3.chr34 11939774 328 + 42124431 GCCGATCTGAGGCAAGAAAAAGGTCATGCTGATACTAAACACAGTGAT-ACCAAAGCATGAAAGTTATCAGGCaaaaaaaaaaaaaaaaaaaaaGGCATTTTTTTTCAATTTACTCGTGGGAAAATGAAGTGAAATGTAGAGAAAATGCAGGGATAGGGG-CTGAGCAATGCCAGTGGACAGAAGGCATGATGTGCACAGGG---GTACGTGGTCAGGGCACACCTTGTAATCTTCCCTGGCGTGAGCGCCACGTGACTCCTTCCGGGCCTCTGCTCCATAAATGGTCTGAAGTGCACAGAGCATCAGGTTCTGCAGCTCCAGGGTCTCTACC i canFam3.chr34 C 0 C 0 a score=785802.000000 s hg38.chr3_KI270937v1_alt 113553 301 + 165607 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCATCAGGGGCAGGTGGGACCCAGTCACACGGGCCCTCCGAGCTGTCAGCCTGGGCCTGCTAGTCCATGGAGTCACTGGTTGTGGCTTTACAGCTGGGGGCCAGCACCCATCCAGACAGCAAGCATGGAACTAAGTCAGCACT-GACGGGACAGACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCCCAACAGTGTGCACAGAGCCC-----ACTGTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCATAGAGCTTGC s panTro4.chr3_GL389630_random 87374 298 - 103936 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAACTTCCATCAGGGGCAGGCGGGACCCAGTCACACGGGCCCTCCGAGCTGTCAGCCTGGGCCTGCTAGTCCATGGAGTCACTGGTTGTGGCTTTACAGCTGAGGGCCAGCACCCATCCAGACAGTAAGCATGGAACTAAGTCAGCACT-GACGGGACAGACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCCCAACAGTGTGCACAGAGCCC-----ACTGTCTGCTCACCCCGGTCAAACGTCTTCAGATGCTTCAGGTCTCCGTAGAGCT--- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441514 301 - 202140232 AGGTCTGTGTTCCAGACCATTCCTGGGAACACAAAAAGTTCCATCAGGGGCAGGTGGGACACAGTCACATGGGCCCTCCGAGCTGTCAGCCTGGGCCTGCTAGTCCATGGAGTCACTGGTTGTGGCTTTATAGCTGAGGGCCAGGACCCATCCAGACAGCAAGCATGGAACTAAGTGAGCACT-GATGGGACAGACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCCCAACATTGTGCACACAGCCT-----GCTGTCTGCTCACCCCGGTCAAACATCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2893131 297 - 123690457 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCATC-GGGGCAGGCAGGACCCAGCCACATGGGCCCTCCGAGATGTCAGCCTGGGCCTGCTAGTCCATGGAGTCACTGGTTGTGGCTTTATAGCTGAGGGCCAGGACCCATCCAGACAGCAAGCATGGAACTAAGTCAGCACT-GACGGGACAGACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCCCAACAGTGTGCACGGAGCCT-----GCTGTCTGCTCGCCCCGACTGAACGTCTTCAGGTCCTTCAGGTCTCTGCAGAGCT--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180473882 293 - 180491593 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCATCAGGGGCAGGCGGGACCC-GTCACAGGGGCCTTCTGAGCTGTCAGCCTGGGCCTGCTAGTCCGTGGAGCCACTGGTTGTGGCTTTATGGCTGTGG----------ATCCGGACAGCAAGCATGGAACTAAGTCAGCACT-GACGGCACAGACA----------CCAGCCCACCCTACAGAAGGCAGG--GCCCAACAC--TGCACAGAGCCCGCTGTGCTGTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1292159 293 + 181584905 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCATCAGGGGCAGGCGGGACCC-GTCACAGGGGCCTTCTGAGCTGTCAGCCTGGGCCTGCTAGTCCGTGGAGCCACTGGTTGTGGCTTTATGGCTGTGG----------ATCCGGACAGCAAGCATGGAACTAAGGCAGCACT-GACGGCACAGACA----------CCAGCCCACCCTACAGAAGGCAGG--GCCCAACAC--TGCACAGAGCCCGCTGTGCTGTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262532 305 + 174439528 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCATCAGGGGCAGGCGGGACCC-GTTACAGGGGCCTTCTGAGCTGTCAGCCTGGGCCTGCTAGTCCGTGGAGCCACTGGTTATGGCTTTATGGCTGTGGGCCAGGACCCATCCGGACAGCAAGCATGGAACTAAGTCAGCACT-GACGGCACAGACA----------CCAGCCCACCCTACAGAAGGCAAG--GCCCAACACTGTGCACAGAGCCCGCTGTGCTGTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1386295 304 + 91010382 AGGTCCGTGTTCCAGACCATTCCTGGGGACACAAAAAGTTCCACCAGGGGCAGGCGGGGCCCAGTCACAGGGGCCTTCTGAGCTGTCCGCCTGGGCCTGCTAGTCCGTGTAGCCACTGGTTATGGCTTTATGGCTGTGGGCCAGGACCCATCCGGACAGCAAGCATGGAACTAAGTCAGCACT-GACAGCACAGACA----------CCAGCCCACCCTGCAGAAGGCAGG--GCCCAACAC--TGCACAGAGCCCGCTGTGCTGTCTGCTCACCCCGGTCAAACGTCTTCAGGTGCTTCAGGTCTCCGTAGAGCTTGC i chlSab2.chr4 C 0 C 0 s mm10.chr13 74327035 256 + 120421639 AGGTCTGTGTTCCAAACCATTCCTGGGGATACACAAGAACCAATGAGAGACAAATAGGACCCAGTCATGTAGGTACTCTGGA-----------------------CATAAAGCAAC-----------ATACAGCTGTGGGGAAGAGAT-GGCTGGACAGCAGGCATGG-ACTAAGGTAGTGGTAAAAGGGACAGATA----------CCAACCTATCCCAAGGAAGGCAGT--A----------TCCTCTGAGAGT-----ACTGCTGACTCACCCCTGTCGAATGTCTTTAGATGCTTTAGGTCTCCATAGAGCTGAC i mm10.chr13 C 0 C 0 s canFam3.chr34 11940102 234 + 42124431 AGGTCGGTGTTCCAGACCATTCCTAGGGACACACCGAGTAC--TCATG---AGATAGGATCCAGTTAACTGGGTCCTCCAGGCTG---------------------------------------------CAGCTGTGGGC-------------------------AGAGTGAATTCCGCACT----GGGACAGACAGGGCTCTGAGGCAGTCTGTCTTGCAAATATCCAGCAGCCCAACTG--TGTGCAGGGCCC----CATGGAATGCTCACCTCGGTCAAATGTCTTCAGATGCTTTAGGTCTCCATAGAGCTGGC i canFam3.chr34 C 0 C 0 e calJac3.chr2 204152355 577 + 204313951 M a score=642402.000000 s hg38.chr3_KI270937v1_alt 113854 174 + 165607 TGATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATTATTTGTAAACTTTTAATTCATA-GAAGCAGCCATACCAAGAACTGCTTAACTTTTAGAC----CTGTTGTTTTGCATTTCATTTT-------ATTTATGTAA s panTro4.chr3_GL389630_random 87672 174 - 103936 TGATTTTCCCACAACCTTCTTGCAACAAGCTTCCCACACGGAACACGGCAGCATGATTTTGCGTTGACTGTGGCACAAAATATTATTTGTAAACTTTTAATGCATA-GAAGCAGCCATACCAAGAACTGCTTAACTTTTAGAC----CTGTTGTTTTGCATTTCATTTT-------ATTTATGTAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441815 174 - 202140232 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTACATTGACTGTGGCACAAAATATTATTTGTAAACTTTTAAGCCATA-GAAGCAGCCGTACCAAGAACTGCTTAACTTTCAGAC----CTGTTGTTTTGCATTTCATTTT-------ATTTATGTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2893428 174 - 123690457 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACAGCAGCACGATTTTGCACTGACTGTGGCACAAAATATTATTCATAAACTTTTAATCCATA-GAAGCAGCCATACCAAGAACTGCTTAACTTGTAGAC----CTGTTGTTTTGCATTTCATTTT-------ATTTATGTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180474175 180 - 180491593 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATTATTGGTAAACTTTTAATTCATA-GAAGCAGCCACACCAAGAACTGCTTAACTTTTAGACTTAACTGTTGTTTTGCATTTCATTTA-----AAAGTTACGTAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1292452 180 + 181584905 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATTATTGGTAAACTTTTAATTCATA-GAAGCAGCCACACCAAGAACTGCTTAACTTTTAGACTTAACTGTTGTTTTGCATTTCATTTA-----AAAGTTACGTAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1262837 173 + 174439528 TGATTTTCCCACAACCTTCTCGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGACACAAAATATTATTGGTAAACTTTTAATCCATA-CAAATAGCCACACCAAGAACTGCTTAACTTTTAGACTTAACTGTTGTTTTGCATTTC------------AGCTAtgtaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1386599 178 + 91010382 TGATTTTCCCACAACCTTCTTGCAACACGCTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGGCACAAAATATTATTGGTAAACTTTTAATCCATA-GAAGCAGCCACACCAAGAACTGCTTAACTTTTAGACTTAACTGTTGTTTTGCATTTCAGCTG-------AGTTATGTAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204152932 181 + 204313951 TGATTTTCTCGCAACCTTCTTGCAGCACACTTCCCACACGGAACACGGCAGCATGATTTTGCATTGACTGTGGCACAAAATAGCGTTTGTAAACTTTTAATCCATA-GAAGCAGCCATACCAAGAACTGCTTAACTTTGAGAC----CTGTTGTTTTGCATTTCATTTTATTTAAAAGTTATGTAA i calJac3.chr2 M 577 C 0 s mm10.chr13 74327291 164 + 120421639 TGATTTTTTCACAGCCTTCTTGCAATACACTCCCCACACGGAACACTGCAGCATGGTTCTGCATCGACTAT--CATAAAACACCATT-ACAAATTTTTAATGCACA-GAAAAAGATAGGTAAAAACTCATACAACTTA---------ATATT-TTCTACATTTGATAT--------ATTTATACAA i mm10.chr13 C 0 C 0 s canFam3.chr34 11940336 177 + 42124431 TGATTTTCTCACAGCCTTCCTGTAACACACTTCCCACACGGAACACAGCAGCATGACTCTGCATCGACTGGAACATAAAATACCATTTGTCAATCTTTAATTCACATGAAGCAGCTAGGACTAAAACTGGTAAACCCTTTAGCT---TTTTTCTTACGCATTTCATTTTT------Atttttttaa i canFam3.chr34 C 0 I 3374 a score=292832.000000 s hg38.chr3_KI270937v1_alt 114028 106 + 165607 ATTAAACAGAAAAATTAGGAAATTTAGACTATGAGTTTATTACTCTGAACTTAAAAATGAAGTCTTGACTAAAGCTTCTGAATA----AATGTTTCTATTATATACATAT s panTro4.chr3_GL389630_random 87846 106 - 103936 ATTAAACAGAAAAATTAGGAAATTTAGACTATGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATA----AGTGTTTCTATTATATACACAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2441989 109 - 202140232 ATTAAACAGGAAAATTAGGAAATTCAGACTGTGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATAAAC-AATGTTTCTATTACATACATAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2893602 110 - 123690457 ATTAAACAGAAAAATTAGGAAATATAGACTTTGAGTTTATTACTCTGAATTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATAAATAAATGTTTCTATTACATACATAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180474355 102 - 180491593 ATTAAACAGAAAAATTAGGAAATTCAG---ATGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATA----C-TGTTTCTATTACATACACAT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1292632 105 + 181584905 ATTAAACAGAAAAATTAGGAAATTCAGACTATGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATA----C-TGTTTCTATTACATACACAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1263010 103 + 174439528 attaaatagaaaaattaggaaattcaG---ATGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGCTTCTGAATA----CATGTTTCTATTACATACACAT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1386777 102 + 91010382 ATTAAATAGAAAAATTAGGAAATTCAG---ATGAGTTTATTACTCTGAACTTAAAAATGAAGTTTTGACTAAAGC-TCTGAATA----CATGTTTCTGTTACATACACAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204153113 103 + 204313951 ATTAAA-AGAACAATGAGGAAACTCAGACTATGAGTTCATTACTCTGAACTTAAAAATGAAGTTCTGACTAACGCTTCTGAA------AATGTTTCTATTAACTACACGT i calJac3.chr2 C 0 C 0 s mm10.chr13 74327455 87 + 120421639 CTTAAAC--------TAGGAAATTCAGACTATGAGTTA---AATTTAAACTT---AATGTAATTCTTTTT-----TCTTGGAGA----AAGGGTCTTATTATATATGCAT i mm10.chr13 C 0 I 746 e canFam3.chr34 11940513 3374 + 42124431 I a score=1063679.000000 s hg38.chr3_KI270937v1_alt 114134 380 + 165607 CTTAGACCCACACACATCCTTTCCAGCGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCCTGTGAGGCACCACGTTCCATACGGCTCCACGGCCAACCAGGCAGCACTGCCT-CCCCAC-ACCCCTGG----------------CGGGACTCCTGATGTGGGGTCTGGTGGTGAACGTGACACGAGCCAGCAGCCCTGTGGTGATACACACAAGGAGGAACTGAGCAGAGCCCTGCTGATGGTGGGGTTGGAACCGAAGGTCTTCAAGGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTCCTTGTACACTGAGTTCCTTCATAGTTTTACTATCAC----------GAGAAACGTGCTAGG s panTro4.chr3_GL389630_random 87952 380 - 103936 CTTAGACCCACACACATCCTTTCCAGCGGGATACAGCCAGGGTCCAGGACGCCAAGCAGACTGCCTGTGAGGCACCACGTTCCATAGGGCTCCGCGGCCAACCAGGCAGCGCTGCCT-CCCCAC-ACCCCTGG----------------CGGGACTCCTGACGTGGGGTCTGGTGGTCAACGTGACACGAGCCAGCAGCCCTGTGGTGATACACACAAGGAGGAACTGAGCAGAGCCCTGCTGATGGTGGGGTTGGAACCGAAGGTCTTCAAGGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTCCTTGTACACTGAGTTCCTTCATAGTTTTACTATCAC----------GAGAAACGTGCTAGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2442098 379 - 202140232 CTTAGACCCACACACATCCTTTCCAGCGGGATACAGCCAGGGTCCAGGACTCCAAGCAGACTGCCTGTGAGGCACCATGTTCCATACGGCTCCACAGCCAACCAGGCAGCACTGCCT-CCCCAC-ACCCCTGG----------------CGGGACGCCTGACGTGGGGTCTGGTGGTCAACGTGACACGAGCCAGCAGCCCTGTGGTGACACACACAAGGAGGAGCTGAACAGAGCCCTGCTGATGGTGGGGTTGGAACCGAAGGTCTACAAGGAGAGGGA-GGGCGTTGGTGGCTGGGGCCCTTGGCCCATCTGACTAGTATCTTCTGCCTATTTTGTAGAAGCTCCTTGTACACTGAGTTCCTTCATAGTTTTACCATGAC----------TAGAAACGTGCTATG i ponAbe2.chr3 C 0 I 1 s nomLeu3.chr11 2893712 381 - 123690457 CTTAGACCCACACACATCCTTTCCAGCGGGATACAGCCGGGGTCCAGGACTCCAAGCAGACTGCCTGTGAGGCACCATGTTCCATACGGCTCAGTGGCCAACCAGGCAGCGCTGCCT-CCCCACAACCCCTGG----------------TGGGACTCCTGACATGGGGTCTGGTGGTCAACGTGACACGAGCCAGCAGCCCTGTGGTGATACACACTAGGAGGAGCTGAGCAGAGCCCTGCTGATGGTGGGGTTGGAGCGGAAGGTCTTCAAGGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTTTGCCTATTTTGTAGAAGCTCCTTGTATACTGAGTTCCTTCATAGTTTTACTGTGGT----------GAGAAACGTGCTATG i nomLeu3.chr11 C 0 I 1 s rheMac3.chr6 180474457 380 - 180491593 CTTAGACCCAGACACATCCTTTCCAGTGGGATACAGCCAGGCTCCAGGACTCCAAGCAGACTGCCTGTGAGGTACCATGTTCCACATGGCTCTGCGGCCAAGCAGGAAACGCTGCCT-CCCCAC-GCCCCTGG----------------CGGGACTCCTGACGTGGGGTCTGGTGGTGAACGTGACACAAGCCAGCAGCCCTGTGGTGACACACACTAGGAGGAGCTGAGCAGAGCCCTGGTGATGGTGGGGTTGGAGCCAAAGGTCTTCAGTGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTTCTTATACACTGACTTCCTTCATAGTTTTACTGTGGC----------AAGAAACGTGCCATG i rheMac3.chr6 C 0 I 1 s macFas5.chr6 1292737 380 + 181584905 CTTAGACCCAGACACATCCTTTCCAGTGGGATACAGCCAGGGTCCAGGACTCCAAGCAGACTGCCTGTGAGGTACCATGTTCCACATGGCTCTGCGGCCAACCAGGCAGTGCTGCCT-CCCCAC-ACCCCTGG----------------CGGGACTCCTGACGTGGGGTCTGGTGGTGAACGTGACACAAGCCAGCAGCCCTGTGGTGACACACACTAGGAGGAGCTGAGCAGAGCCCTGGTGATGGTGGGGTTGGAGCCAAAGGTCTTCAGTGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTTCTTATACACTGACTTCCTTCATAGTTTTACTGTGGC----------AAGAAACGTGCCATG i macFas5.chr6 C 0 I 3493 s papAnu2.chr6 1263113 380 + 174439528 CTTAGACCCAGACACATCCTTTCCAGTGGGATACAGCCAGGCTCCAGGACTCCAAGCAGACTGCCTGTGAGGTACCATGTTCGACATGGCTCTGCGGCCAAGCAGGAAACGCTGCCT-CCCCAC-ACCCCTGG----------------CGGGACTCCTGACGTGGGGTCTGGTGGTGAACGTGACACAAGCCAGCAGCCCTGTGGTGACACACACTAGGAGGAGCTGAGCAGAGCCCTGGTGATGGTGGGGTTGGAGCCGAAGGTCTTCAGTGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTTCTTGTACACTGACTTCCTTCATAGTTTTACTGTGGC----------GAGAAACATGCCATG i papAnu2.chr6 C 0 I 1 s chlSab2.chr4 1386879 381 + 91010382 CTTAGACCCAGACACATCCTTTCCAGTGGGATACAGCCAGGCTCCAGGACTCCAAGCAGACTGCCTGTGAGGCACCATGTTCCACATGGCTCCGCGGCCAACCAGGCAATGCTGCCTCCCCCAC-ACCCCTGG----------------CGGGACTCCTGACGTGGGGTCTGGTGGTGAACGTGACACAAGAAAGCAGCCCTGTGGTGACACAAACTAGGAGGAGCTGAGCAGAGCCCTGGTGATAGTGGGGTTGGAGCCGAAGGTCTTTAGTGAGAGGGAGGGGCGTGGGTGGCTGGGGCCCTTGGCCCATCTGGCTACTGTCTTCTGCCTATTTTGTAGAAGCTTCTTGTACACTGACTTCTTTCATAGTTTTACTGTGGC----------GAGAAACGTGCCATG i chlSab2.chr4 C 0 I 1 s calJac3.chr2 204153216 365 + 204313951 CTTAGACCCACATGCATGCTTTCCAGCGGGATACAGCCA-----------------CAGACTGCCTGTGAGGTGCCATGTTCCATATGGCTCTGCGGCCAGCCAGCCAGCACCCCCT--CCCAC-ACCCCTGGTGGACACGGGACCAGATGGGACTCCTGACGTGGGGTCTGGTGGTGAATG-------------------TGTGGTGATACACACTAGGAG---CTGAGCAGGGTGCTGATGATGGTGGTGTAGGAGCCAAAGGTCTTCAAGGAGAGGGA-GGGCGTGGGTGGCTGGGACCCTTGGCCCATCTAGCTACTGTCTTCGGCCTGTTTTGCAAAGGCTCCTCGTACACTGGGGTCCATCACAGTTTTACAGTGATGAGGAACTAAGAGAAACAAAATAAG i calJac3.chr2 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11940513 3374 + 42124431 I a score=572058.000000 s hg38.chr3_KI270937v1_alt 114514 198 + 165607 ---------------------------------AGTGGACCTGAAGTTTACT-TAGGTATGCTGGGAACTGGGCATCAGCTTTTGCTTCCTGTGGGACACACAGGCACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAATTGTCTCTTCCTCTACCAATGCACCTTCGTGGTTCAATTTGGACATTTCATCTGATTTT s panTro4.chr3_GL389630_random 88332 198 - 103936 ---------------------------------AGTGGACCTGAAGTTTACT-TAGGTATGCTGGGAACTGGGCATCAGCTTTTGCTTCCTGTGGGACACACAGGTACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAATTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2442478 199 - 202140232 ---------------------------------AGTGGAACTGAAGTTTACTGTAGGTATGCTAGGAACTGGGCATCAGCTTTTGCTTCCAGTCAGACAGACAGGCACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACTCTAATTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTTT i ponAbe2.chr3 I 1 C 0 s nomLeu3.chr11 2894094 199 - 123690457 ---------------------------------AGTGGACCTGAAGTTTACTGTAGGTATGCTGGGAACTGGGTGTCAGCTTTTGCTTCCTGTGGGACAGACAGGTACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTGTGCTTTGCTCCACTGACCCTAACTGTCTCTTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTCT i nomLeu3.chr11 I 1 C 0 s rheMac3.chr6 180474838 199 - 180491593 ---------------------------------AGTGGACCTGAAGTTTACTGTAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACTTTCATGGTTTAATTTGGACATTTCATCTGATTTT i rheMac3.chr6 I 1 C 0 s macFas5.chr6 1296610 199 + 181584905 ---------------------------------AGTGGACCTGAAGTTTACTGTAGGTGTGCTGGCAACTGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTTT i macFas5.chr6 I 3493 C 0 s papAnu2.chr6 1263494 199 + 174439528 ---------------------------------AGTGGACCTGAAGTTTACTGTAGGTGTGCTGGCAACCGGGCGTCAGCTTTTGCTTCCTGTGGGACAGACAGATACCACCTCCGTgatc------cctcctcctccttgcttCTCCCTCTAACTCTGCTTTGCTCCACTGACCCTAATTGTTTCCTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTTT i papAnu2.chr6 I 1 C 0 s chlSab2.chr4 1387261 199 + 91010382 ---------------------------------AGTGGACCCGAAGTTTACTGTAGGTGTGCTGGCAACCGGGCGTCAGCTGTTGCTTCCTGTGGGACAGACAGACACCACCTCCGTGATC------CCTCCTCCTCCTTGCTTCTCCCTCTAACTCTGCTTTGCTCCCCTGACCCTAATTGTTTCTTCCTCTACCAATGCACCTTCATGGTTTAATTTGGACATTTCATCTGATTTT i chlSab2.chr4 I 1 C 0 s calJac3.chr2 204153581 225 + 204313951 GGTGTAGGTACGTGGCTGGATGAAATGTTTGTAGGCAGATCTGAAGTTTTTTGTAGGTATGCTGGGAACTAGGTGTCAGCGTTTGCTTCCTGTGGGACGGAGGGGCACCACTTCCCTGATCCCTCCTCCTCCTCCTCCTCGCTTCTCCCTCTAACTCTGCTTTGTTCCTCTGACCCTAATTGTCTCTTCCTCTGCAAATGCAGCTTCATGGTTGA-------------ATCTGATTTC i calJac3.chr2 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11940513 3374 + 42124431 I a score=1205411.000000 s hg38.chr3_KI270937v1_alt 114712 394 + 165607 CCTTAGACTCATACATAATCGTAACACTGTAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAAATTGCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCGACGTTTTCATATCATCTtttcgtatttctggttacattatttcaaggcattttaaa-ttttttgtttgaaatgcgaatgagat-atttactgatgtctgagcagattactgctggcacattgcaaagctactgatttttacatacaaatctcttatacacataccttactacattcttgttttgtttctgttagtttttccgtttattctctggaaattttttggaaattatatctgtaaataatggcaactgtatctattccttttcaat s panTro4.chr3_GL389630_random 88530 395 - 103936 CCTTAGACTCATACATAATCGTAACACTGTAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAACGAAAAAAATTGCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCGATGTTTTCGTATCATCTTTTCGTATTTCTGGTTACATTATTTCAAGGCATTTTGAATTTTTTTGTTTGAAATGTGAATGGGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagctactgatttttacatacaaatctcttatccacataccttactacattcttgttttgtttctgttagtttttccgtttactctctggaaattttttggaaattatatctgtaaataatggcaactgtatctattccttttcaat i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2442677 388 - 202140232 CCTTAGACTCATACACAATCGTAACACTGTAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAAATTGCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCCACGTTTTCATATCCTTTTTTCGTATTTCTGGTCACATTATTTCAAGGAATTTTTAA-TTTTTTGTTCGAAATGTGAATGAAAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagccactgatttttacatacaaatctcttatccagacaccttactacattcttgttt------tgttagtttttcagtttcttctctggaagtttttgggaaattatatctgtaaataatggcaactgtatctattccttttcaat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894293 394 - 123690457 CCTTAGGCTCATACATAATTGGAACACTGTAATGCACATC----AACCTCATGGTTTTTCAGGAAGAACAAATGAAAAAAACTGCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCCACGTTTTCATATCATtttttcatatttctggttacagtatttcaaggcattttaaa-ttttttgtttgaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacattgcaaagctactgatttttagatacaaatctcttatccagacaccttactACATTCTTGTTTTGTTTCTGTTAGTTATTCAGTTTATTCTCTGGAAATTTTTTGGAAATTATATCTGTAAATAATGGCAACTGTATCTATTCCTTTTCAAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475037 381 - 180491593 CCTTGGACTCATACATAATCATGACACTGCAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAAGTTGCATCTCAGA----ATCTAGTA--------TT---ACATtctttcatgtcctttagcagccacgttttcatatcctttctt-gtatttctggttacattatttcaaggcatttttaa-ttttttgtttgaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacatcgcaaagctactgatttttagatacaaatatcttatccagacaccttactgcattcttgttttgtttctgttagtttttcagtttattctctgggaattttttggaaattatgtctgtaaataatagcaattGTAT------------AAT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1296809 393 + 181584905 CCTTAGACTCATACATAATCATGACACTGCAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAAGTTGCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCCACGTTTTCATATCCTTTCTT-GTATTTCTGGTTACATTATTTCAAGGCATTTTTAA-TTTTTTGTTTAAAATGTGAATGAGAT-ATTTACTGATGTCTGAGCAGAttactgctggcacattgcaaagctactgatttttagatacaaatctcttatccagacaccttactgcattcttgttttgtttctgttaatttttcagtttattctctgggaattttttggaaattacatctgtaaataatagcaattgtattgattccttttcaat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1263693 393 + 174439528 CCTTAGACTCATACATAATCATGACACTGTAATGCACATC----AACCTAATGGTTTTTCaggaagaacaaatgaaaaaagttgCATCTCAGA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCCACGTTTTCATATCCTTTCTT-GTATTTCTGGTTACATTATTTCaaggcatttttaa-ttttttgtttaaaatgtgaatGAGAT-ATTTACTGATGTCTGAGCAGATTACTGCTGGCACATCGCAAAGCTACTGATTTTTAGATACAAATCTCTTATCCAGACACCTTACtgcattcttgttttgtttctgttaatttttcagtttattctcTGGGAATTTTTTGGAAATTACATCTGTAAATAATAGCTATTGTACCGATTCCTTTTCAAT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1387460 393 + 91010382 CCTTAGACTCATACATAATCATGACACTGCAATGCACATC----AACCTAATGGTTTTTCAGGAAGAACAAATGAAAAAAGTTGCATCTCAAA----ATCTAGTA--------TT---ACATTCTTTCATGTCCTTTAGCAGCCACGTTTTCATATCCTTtctt-gtatttctggttacattatttcaaggcatttttaa-ttttttgtttaaaatgtgaatgagat-atttactgatgtctgagcagattactgctggcacatcacaaagctactgatttttagatataaatctcttatccagacaccttactgcattcttgttttgtttctgttaatttttcagtttattctctgggaattttttggaaattacatctgtaaataatagcaattgtattgattccttttcaat i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204153806 395 + 204313951 CCTTAGACTGACACATAACTGTAACACGGTAATGCACATC----AACCTAATGGTTCTTCAGGAAGAACAAACGCAACAC-TTGCATCTTAGAAGGCAGTAAGTA--------TC---ACATTCTTAAACACACTTTAGCAG-GATG-TTTCatatctgttttacgtatttctggttatatttattcaaggcattttttg-ttttttgtctgaaaggtgaatgagat-atttactgacgtctgagcggattcctgctggcacattgaaaagctactgaggtttagctacaaacctttcatccagacacctacctacatccttcttttgtttctattagtttttcaatttattctctgggaactttttggaaattgtgtctgtaaataatagcaattatatctattccttttcaat i calJac3.chr2 C 0 C 0 s canFam3.chr34 11943887 364 + 42124431 ccccACAATGATACATAAGTTTAAAATTGTAATGCACGCTATCAAATGTTCTGGCCTTTCAGGATAAGGAAATGGAAAAAACT--ATCTTAGA----ATCTAGTAAATGTTAGTTAAaacattcttttatattcttcagtgctcatcttttcata----------ctctttagggttaggtttattcaaggcattttaaa-cttttggtctgcactgtgaatgagatgattttctaatg--------gattattgcaggcatgttggaaagctact----------tttgaatcttttatacagatatctc----cattcttgtttt-----tatgagtttctca-cttattgccttgagattttt----aattgtatctgtaagtaatgatacttgt--ccactccttttcaat i canFam3.chr34 I 3374 C 0 e mm10.chr13 74327542 746 + 120421639 I a score=19580.000000 s hg38.chr3_KI270937v1_alt 115106 10 + 165607 -----atttactgcc--------- s panTro4.chr3_GL389630_random 88925 10 - 103936 -----atttactgcc--------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443065 10 - 202140232 -----atttactgcc--------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894687 10 - 123690457 -----ATTTACtgcc--------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475418 10 - 180491593 -----ATTTACtgcc--------- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1297202 10 + 181584905 -----atttactgcc--------- i macFas5.chr6 C 0 I 6467 s papAnu2.chr6 1264086 10 + 174439528 -----ATTTACTGCC--------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1387853 10 + 91010382 -----ATTTACTCcc--------- i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11944251 24 + 42124431 ACGTAACTGATTTCTATCACTCAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C a score=926.000000 s hg38.chr3_KI270937v1_alt 115116 1 + 165607 a s panTro4.chr3_GL389630_random 88935 1 - 103936 a i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443075 1 - 202140232 a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894697 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475428 1 - 180491593 g i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1303679 1 + 181584905 g i macFas5.chr6 I 6467 C 0 s papAnu2.chr6 1264096 1 + 174439528 G i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1387863 1 + 91010382 g i chlSab2.chr4 C 0 I 6359 s canFam3.chr34 11944275 1 + 42124431 A i canFam3.chr34 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C a score=92571.000000 s hg38.chr3_KI270937v1_alt 115117 43 + 165607 agaccagctgggtcatggaaaccctaacccagtggcactagag s panTro4.chr3_GL389630_random 88936 43 - 103936 agaccagctgggtcatggaaaccctaacccagtggcactagag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443076 43 - 202140232 agaccagctgggtcatagaaaccctaacccagtggcactacag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894698 43 - 123690457 aaaccagctgggtcgtggaaaccctaacccagcggcagtagag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475429 43 - 180491593 agaccaactcgatcgtggagaccctaacccagcagcactagag i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1303680 43 + 181584905 agactagcttggtcgtggagaccctaacccagcagcgctagag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264097 43 + 174439528 AGATCAACTcggttggggagaccctaacccagcagcactagag i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394223 43 + 91010382 agaccagcttggtcgtggagaccctaacccagcagcgctagag i chlSab2.chr4 I 6359 C 0 s canFam3.chr34 11944276 43 + 42124431 GTATCACCTGGAAATCAGAAAAACTAGtcctccaactcaagtg i canFam3.chr34 C 0 I 227 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C a score=39627.000000 s hg38.chr3_KI270937v1_alt 115160 18 + 165607 gaagtaaagacacacaca s panTro4.chr3_GL389630_random 88979 18 - 103936 gaattaaagacacacaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443119 14 - 202140232 gaattaaag----acaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894741 18 - 123690457 gaattaaagacacacaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475472 18 - 180491593 gaattaaagacacacaca i rheMac3.chr6 C 0 I 351 s macFas5.chr6 1303723 18 + 181584905 gaattaaagacacacaca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264140 18 + 174439528 gaattaaagacacacaca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394266 18 + 91010382 gaattaaagacacacaca i chlSab2.chr4 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C e canFam3.chr34 11944319 227 + 42124431 I a score=231807.000000 s hg38.chr3_KI270937v1_alt 115178 144 + 165607 cagaaatatagagtgtggagtgggaaatcaggggtctcacagccttcagagccaaaagcctcaaacagagatttacccacgtatttattgacagcaagccagt---gataagacttactgaaagtattccttacaggaaataaaggg s panTro4.chr3_GL389630_random 88997 144 - 103936 cagaaatatagagtgtggagtgggaaatcaggggtctcacagccttcagagccaagagccttgaacagagatttacccacgtatttattgacagcaagccagt---gataagacttactaaaagtattccttacaggaaataaaggg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443133 143 - 202140232 cagaaatatacagtatggagttggaaatca-cggtctcacagccttcagagccgagagcctcgaacagagatttacccacttatttattgacagcaagccagt---gataagacttactaaaagtattgcttatgggaaataaaggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894759 143 - 123690457 cagaaatatagagtgtggagtgggaaatcg-gggtctcacagccttcagagctgagagacttgaacagagatttacccacgtatttactgacagcaagacagt---gataagacttactaaaagcattccttacaggaaataaaggg i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1303741 144 + 181584905 cagaaatatagcgcgtggggtgggaaatctggggtctcacagccttcagagctgagagcctcaaacagaggtttactcacatatttactgacaacaagccagt---cataagatttactaaaagtattccttacgggaaacaaaggg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264158 146 + 174439528 cagaaa-atagcatgtggagtgggaaatcaggggtctcacagccttcagagctgagagcctcgaacagagatttactcacatatttattgacaacAAGCTTATGACTATAAGAtttactaaaagtattccttacgggaaacaaaggg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394284 144 + 91010382 cagaaatatagcgcgtggggtgggaaatcagggatctcacagccttcagagctgagagcctcgaacagagatttacccacgtatttactgacaacaagccagt---cataagatttactaaaagtattccttatgggaaacaaaggg i chlSab2.chr4 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C e canFam3.chr34 11944319 227 + 42124431 I e rheMac3.chr6 180475490 351 - 180491593 I a score=169198.000000 s hg38.chr3_KI270937v1_alt 115322 107 + 165607 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagagcgctcatgctattgtttgtggtttaagaaggt-------------cttaagaggttt-tccactctgggtg s panTro4.chr3_GL389630_random 89141 107 - 103936 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagattgctcatgctattgtttgtggtttaagaacgt-------------cttaagaggttt-tccgctctgggtg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443276 108 - 202140232 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagatcactcatgctattgtttgtggtttaagaacgc-------------cttaagaggtttctcccccctgggtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2894902 120 - 123690457 atgggtctggctagttatctgcagcaggagc-------atgtccttaaggcacagatcgctcatgctactgtttgtggtttaagactgtggtttaagactgccttaagaggttt-tctgctctgggtg i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1303885 106 + 181584905 atgggtctggctagttatctgcagcaggcac-------acgtccttaa-gcacagatcgctcatgctactgtttgtggtttaagaaaca-------------cttaagcggttt-tccactctgggtg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264304 107 + 174439528 atgcgtctggctagttatctgcagcaggaac-------atgtccttaaggcacagatcgctcatgctactgtttgtggtttaagaaccc-------------CTTAAgtggttt-tccgccctgggtg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394428 106 + 91010382 atgggtctggctagttatctgcagcaggaac-------atgttcttaa-gcacagattgctcatgctactgtttgtggtttaggaaacc-------------cttaagcggttt-tccgccctgggtg i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11944546 96 + 42124431 atgactccaggcag-tggcagcagctgtagctcccactagatcccgagggtaaa-----------caaccatctgcactcatacaatca-------------tt------gttt-ttcactttgagta i canFam3.chr34 I 227 I 209 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C e rheMac3.chr6 180475490 351 - 180491593 I a score=200359.000000 s hg38.chr3_KI270937v1_alt 115429 118 + 165607 ggccaggtgttccttgccctcattacggtaaacccataaccttcctgcgtggtcgtcctggccatcacgagcacgtcaca-tgctgcagagattttgtttatggccagttttggggcca s panTro4.chr3_GL389630_random 89248 118 - 103936 ggccaggtgttccttgccctcattacggtaaacccataaccttccagcgtgggcgtcatggccatcacgagcatgtcaca-tgctgcagagattttgtttatggccagttttggggcca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443384 118 - 202140232 ggccaggtgttccttgccctcattccagtaaaccctcagccttccggcgtgggtgtcatggccaccacgagcatgtcaca-tgctgcagagattttgtttatggccagttttggggcca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895022 117 - 123690457 ggccaagtgttccttgccctcattatggtaaacccacaaccttctggcacgggcgtcatggccatcatgagcatgtcacagtgctgcagagattttgtttatggccagttttgggga-- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1303991 119 + 181584905 ggccaggtgttccttgccctcattccagtaaactgacagccttccagcgtgggcgtcatggccatcacgagcacgtcacagtgctgcagagattttgtttatggccagttttggggcca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264411 119 + 174439528 ggccaggtgttccttgccctcattctggtaaacccacaaccttccagcgtgggcgtcATGGCCATCACGAGCACGTCACAgcgctgcagagattttgtttatggccagtttgggggcca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394534 119 + 91010382 ggccaggtgttccttgccctcattccagtaaactgacagccttccagcgtgggtgtcatggccaccacgagcatgtcacagtgctgcagagattttgtttatggccagttttggggcca i chlSab2.chr4 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C e canFam3.chr34 11944642 209 + 42124431 I e rheMac3.chr6 180475490 351 - 180491593 I a score=60665.000000 s hg38.chr3_KI270937v1_alt 115547 34 + 165607 gtttatggccacatttgggggcctgtttctatca s panTro4.chr3_GL389630_random 89366 34 - 103936 gtttatggccacatttgggggcctgtttctaaca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443502 34 - 202140232 gcttttggccacatttgggggcctattcctaaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895139 18 - 123690457 ----------------gggggcctgtttccaaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475841 33 - 180491593 gtttatggccag-tttgggggcctgttCCCAACA i rheMac3.chr6 I 351 C 0 s macFas5.chr6 1304110 34 + 181584905 gtttatggccagatttgggggcctgttcccaaca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264530 34 + 174439528 gtttatggccacactggggggcctgttcccaaca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1394653 34 + 91010382 gtttatggccagatttgggggcctgttcccaaca i chlSab2.chr4 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204154201 0 + 204313951 C e canFam3.chr34 11944642 209 + 42124431 I a score=35008.000000 s hg38.chr3_KI270937v1_alt 115581 21 + 165607 atttacctcatttcttttttt s panTro4.chr3_GL389630_random 89400 21 - 103936 atttacctcatttcttttttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443536 21 - 202140232 atttacctcatttcttttttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895157 18 - 123690457 atgta---cgggcctgtttcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475874 21 - 180491593 ATTTACCTCATTTCTTTTTTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304144 21 + 181584905 ATTTACCTCATTTCTTTTTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1264564 18 + 174439528 ---tgtCCCCCTTCTTTGTTT i papAnu2.chr6 C 0 I 6789 s chlSab2.chr4 1394687 21 + 91010382 ATTTACCTCATTTCTTTTTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204154201 17 + 204313951 atttacctcatgttttt---- i calJac3.chr2 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11944642 209 + 42124431 I a score=145456.000000 s hg38.chr3_KI270937v1_alt 115602 74 + 165607 GAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaatgca-tttccgcaagcatagg s panTro4.chr3_GL389630_random 89421 74 - 103936 GAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCCTtcccccaacgaaatgca-tttctgcaagcttagg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443557 74 - 202140232 GAT--TGTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCCTTCCCCCAAGGAAACACA-TTTCCAcaggcatcgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895175 75 - 123690457 aacaATGTACCTATTAATAGCCAGAGTCAGCAGAAAAATCCctt-ccccaacgaaacgca-tttccacaagcacagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475895 74 - 180491593 GAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaacgca-cttccacaagcacagg i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304165 74 + 181584905 GAT--TCTTACTATTAATAGCCAGAGTCAGCAGAAAAATCCcttcccccaacgaaacgca-cttccacaagcacagg i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1394708 70 + 91010382 GAT--TCTTACTATTAATAGCTAGAGTCAGCAGAAAAATCCCTCCCCCCAACGAAACGCA-TTTCCACAAGCA---- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204154218 71 + 204313951 aat--tcttactattaatagccagagtcagcacaaAAAttcct----ccaatgaaatgcattttccacgagcatggg i calJac3.chr2 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11944642 209 + 42124431 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=445861.000000 s hg38.chr3_KI270937v1_alt 115676 194 + 165607 aagctctgtttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcaccaagacacaccttgttTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTATATCCTAAGGCATGTTCCCATTCTCTAACGCAAGGGTTCCTTCTTTCCCAGCTGGCCTCCAA--------------- s panTro4.chr3_GL389630_random 89495 194 - 103936 aagctctgtttgttcagtgctgactccggcacctcacggagcctgggatacagcaggcacGAAGACACACCTTGTTTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTCTATCCTAAGGCATGTTCCCATTCTCTAATGCAAGGGTTCCTTCTTTCCCAGCTGGCTTCCAA--------------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443631 194 - 202140232 aagctctgtttgttcagtgctgactccagcacctcacggagtctgggatacagcaggcaccaagacacaccttgttTGGCGGGAACACTTCTAGTA-TTCTCACTTCAAACCATCTCA--GATTTGCCATTTCTATATCCGAAGTCGTGTTCGCGTTCTCTAATGCACTGGTTCCTTCTTTCCCAGCTGCCCTCCCA--------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895250 194 - 123690457 aagctctgtttgttcagtgccgactccagcacctcacggagcctgggatacagcaggcaccaagacacaccttgttTGGTGGGAACACTTCTAGTA-TTCTCACTTCAAACTATCTCA--GATTTGCCATTTCTATATCCTAAGGCCTGTTCCCATTCTCTAATGCAATGGTTCCTTCTTTCCCAGCTGGCCTCCAA--------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180475969 196 - 180491593 aagctctgtttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcaccaagacacaccttgtttggtgagaatGTTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGCATGTTCCCATTCTCTAATACAATGGTTCCTTCTCTCACAGCTGGCCTCCAA--------------- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304239 196 + 181584905 aagctctgtttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcaccaagacacaccttgtttggtgagaatGTTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGCATGTTCCCATTCTCTAATGCAATGGCTCCTTCTCTCACAGCTGGCCTCCAA--------------- i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1394778 191 + 91010382 -----CTGtttgttcagtgctgactccagcatctcacggagcctgcgatacagcaggcaccaagacacaccttgtttggtgagaatGTTTCTAGTA-TTCTCACTTCAAACTGTCTCACGGATTTGCCATTTCTGTATCCTAAGGCATGTTCCCATTCTCTAATGCAATGGTTCCTTCTCTCAAAGCTGGCCTCCAA--------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204154289 185 + 204313951 aacttctgtttgttcagtgctgactccagcatctcacagagcctagcatac-----------agACACACCTTGTTTGGTGGGAATGCTTCTAGTA-TTCTCACTTCAAAATATCTCATGAATTTGCCATTTCTACATCCTAAGGCACCTTCCCATTCTCTAGTGCAATGATTCCTTCTTTCCTAGCTGGCCTCCAA--------------- i calJac3.chr2 C 0 I 132 s canFam3.chr34 11944851 155 + 42124431 aagaTCTGTATGT-------------------------------------------------------GCCTTACTTGGTGGAAATGTTTCTAGGACTTCCCATTTCAAAATATCATG--GGTTCATCATTTCCACACCCAAATAGAATTTCCTACTATATAGTGCAAGGATTATATCTGTCGTAGCTGGTGGCCATTCCCCGGTATCAATA i canFam3.chr34 I 209 C 0 e mm10.chr13 74327542 746 + 120421639 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=232747.000000 s hg38.chr3_KI270937v1_alt 115870 92 + 165607 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCTTAGTCACGCTGTTCTTCTCACCGTTCCACAAAACCTCCCTCAAGCCCAG s panTro4.chr3_GL389630_random 89689 92 - 103936 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCTTAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443825 92 - 202140232 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCTTAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895444 92 - 123690457 CCCTACAAAAGCACTGCAGGGCATCACTCAGC-----------------CTTCTGTGCCTTAGTCACGCTGTTCTTCTCACCTTTCCACAAAGCCTCCCTCAAGCCCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476165 92 - 180491593 CCCTACAAAAGTACTGCAAGGCATCACTCAGC-----------------CTTCTGTGCCTTAATCACGCTATTCTTCTCACCGTTCCAGAAAGCCTCCCTCAAGCTCAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304435 89 + 181584905 CCCTACAAAAGTACTGCAGGGCATCCCTTAGC-----------------CTTCCGTGCCTTAGTCACACCG---TTCTCACCGTTCCACAAAGCCTCCTTCAAGCCCAG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1394969 92 + 91010382 CCCTACAAAAGTACTGCAGGGCATCCCTTAGC-----------------CTTCTGTGCCTTAGTCACGCTGTTCTTCTCACCGTTCCACAAAGCCTCCCTCAAGCCCAG i chlSab2.chr4 C 0 I 156 s calJac3.chr2 204154606 89 + 204313951 CCCTACAAAAGTCCTGCAGGATATCCCTCAGC-----------------CTTCTGGGCCTTAGTCATGCTG---TTCTCAGCATTCCACAAAGCCTCTCTCAAGCCCAG i calJac3.chr2 I 132 C 0 s canFam3.chr34 11945006 109 + 42124431 CCCTGCAAAAGTTCTGCTCAGTTCCTCTTGGCTGGTTTCCTAAAACAAACCTCTGCCTTTCACTCGCACTATTCGCCTTACCTTTCCAGGAAGTTTCCCTAAAGCCCAG i canFam3.chr34 C 0 I 1 e mm10.chr13 74327542 746 + 120421639 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=450549.000000 s hg38.chr3_KI270937v1_alt 115962 198 + 165607 CCTCACCTGAAGACCGAAGGGCACGGGCCTCTGAAAATTGT-CAGCAGGGAACCTGTTCTCTTGTGTC------------TAACACCAAATGCCTTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAA----TACGCAGAAATTCTTGCAAAT-------AGCAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGTTATTAGAGGaattgag s panTro4.chr3_GL389630_random 89781 197 - 103936 CCTCACCTGAAGACTGAAGGGCACGGGCCTCTGAAAA-TGT-CAGCAGGGTACCTGTTCTCTTGTGTC------------TAACACCAAATGCCTTTCAGAATAGGACTAAAGCAGTGGACT---TCTTTCTAGAAAA----TACGCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGTTATTAGAGGaagtcag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2443917 197 - 202140232 CCTCACCTGAAGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCTCGTGTC------------TAACACCAAATGCCTTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTGGAAAA----TACACAGAAATTCATGCAAAT-------AGTAGAGAAGAGATCTCATTCTTGGA-CAAGAATCCTTGTTATTAGAGGaattcag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895536 197 - 123690457 CCTCACTTGAAGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGCGAACCTGTTCTCTTGTGTC------------TAACACCAAATGCCTTTCAGAATACGACTAAAGCAATGGACT---TCTTTTCAGAAAA----TATGCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCTTGGA-CAAGAATCCTTGTTATTAGAGGaattcag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476257 198 - 180491593 TCTTACTTCAAGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCTTGTGTCT-----------TAACACCAAACGCCTTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAA----TACGCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGTTATTAGAGGaattcag i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304524 198 + 181584905 CCTCACTTGAAGACCGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCTTGTGTCT-----------TAACACCAAACGCCTTTCAGAATAGGACTAAAGCAATGGACT---TCTTTTTAGAAAA----TATGCAGAAATTCTTCCAAAT-------AGTAGACAAGAGATCTCATTCATGGA-CAAGAATCCTTGTTATTAGAGGaattcag i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1395217 198 + 91010382 CCTCACTTCAGGACTGAAGGGCACAGGCCTCTGAAAA-TGT-CAGCAGGGAACCTGTTCTCTTGTGTCT-----------TAACACCAAACGCCTTTCAGAACAGGACTAAAGCAATGGACT---TCTTTTTAGAAAA----TACGCAGAAATTCTTGCAAAT-------AGTAGACAAGAGATCTCATTCATGGC-CAAGAATCCTTGTTATTAGAGGaattcag i chlSab2.chr4 I 156 C 0 s calJac3.chr2 204154695 200 + 204313951 CCTCACTTGAAGAATGAAGTGCACAGGCCTCTGACAA-TGT-CAGCAG-GAACCTTTGCTCTTGTGTCTGT----GTCTGCAACACCAAATGCCTTT-GGAATAGGACAAAAGCA-TGGACT---TTTTAC--AAATA----TTCACGGAAATTCTTGCTAAT-------AGTAAACAAGAGACCTCATTCATGAA-CAAGAATCCTTGTTATTAGAGGAACTCAG i calJac3.chr2 C 0 I 146 s canFam3.chr34 11945116 203 + 42124431 ACTTCTCTGAAGTT-------------CCTACAGAAG-TATGCAGTATGCAACTT-TTTTCTTTTGATGATTAGAGTTTGTGCCACTGGACGC--TTCAGGATAGAACTAA---AAGGGACTTCCTCTTTTCGGAAAACGTCTCCACAGAAA-TCTTGCAAATGACTTCAACTGGAC-AGAGATCTCATTTGTGGACCAAGAATCCCTG-TATTAGAAGAATCTGG i canFam3.chr34 I 1 C 0 e mm10.chr13 74327542 746 + 120421639 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=3276.000000 s hg38.chr3_KI270937v1_alt 116160 1 + 165607 t s panTro4.chr3_GL389630_random 89978 1 - 103936 t i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2444114 1 - 202140232 t i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895733 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476455 1 - 180491593 t i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304722 1 + 181584905 t i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1395415 1 + 91010382 t i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204155041 1 + 204313951 t i calJac3.chr2 I 146 C 0 s canFam3.chr34 11945319 1 + 42124431 T i canFam3.chr34 C 0 I 752 e mm10.chr13 74327542 746 + 120421639 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=855415.000000 s hg38.chr3_KI270937v1_alt 116161 396 + 165607 ttcttagactgactatatatcaggttctccacgg---ccccatggctaatggctgccatactggacggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAGCAGCACAGGCCGCACAGATCACTGTCCACCTGCCGCCCACTCTCCCTCTCTGCTGAGTATATTTAGGGGCAGCAACAGGTCTAGCTtaaagacgtttccgagctgctggaagccaggcatgatgacatgatcaatatctgggcctgagatgtaagcaccagtgttgtgttgaactccaggaaacct-ctaagagaaagctgccctgctGGGGACGGAGCTTCTCCGGCAGTCCTGCGGCTCCCTCTCCTCCACACTGTGACTCATCCATGACAGCCAGC s panTro4.chr3_GL389630_random 89979 396 - 103936 tccttagactgaccatatatcaggttctccacgg---ccccatggctaatggctgccatactggatggcaaacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAGCAGCACAGGCCGCACAGATCACTGTCCACCCGCCGCCCACTCTCCCTCTCTGCTGAGTATATTTAGGGGCAGCAACAGGTCCAGCTTAAAGACGTTTCCGAGCTGCTGGAAGCCAGGCATGATGACATGATCAATATCTGGGCCTGAGATGTAAGCACCAGTGTTGTGTTGAACTCCAGGAAACCT-CTAAGAGAAAGCTGCCCTGCTGGGGACAGAGCTTCTCCGGCGGTCCTGCGGCTCCCTCTCCTCCACGCTGTGACTCATCCATGACAGCCAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2444115 379 - 202140232 ttcttagactgactatatatcaggttctccacag--cccccgtggctaatggctgccatactggacggcaaacactc--aacatttccatcatcacagacggtcttactgga------------------cTGACTCCCAGCAGCACAGACCGCACAGATCACTTTCCACCCACCGCCTACTCTCCCTCTCTTCTGAGTATGTTTAGGGGCAGCAACAGGTccagcttaaagacatttccgagctgctggaagccaggcgtgatgacatgatcagtatctgggcctgagatgtaagcaccagtgctgtgttgaactccaggaaacct-ctaagagaaagcggccctgctGGGGACTGAGCTTCTCTGGTGG------------------TCCACGCTGTGACTCATCCATGACAGCCAGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2895734 396 - 123690457 ttcttagactgactatatatcaggttctccacag-ccccctgtggctaatggctgccatactggacggcagacactc--aacatttccatcatcacagacggtcctactgga------------------cCGACTCCCAGCAGCACAGGCAGCACAGATCACTTTCCACCCGCCGCCCACTCTCCCTCTCTTCTGAGTATATTTAGGGGCAGCAACAGGTccagcttaaagacatttccgagctgctggaagccaggcgtgatgacatgatcaatatctgggcctgagatgtaagcaccagtgttgtgttgaactccaggaaACCT-CT--GAGAAAGCTGCCCTGCTGGGGACTGAGCTTCTACGGTGGTCCTGTGGCTCCCTCTCCTCCACGCTGTGACTCATCCATGACAGCCAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476456 401 - 180491593 ttctcagactgactatatatcaagttctccacag-ccctctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtcccactgga------------------cCGACTCCCAGCAGCACAGGCTGCACACATCAGTTTCCACCCACCGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCCAAGCTGCTGGAAGTCAGGCATGATGACATGATCAATATGTGGGCCTGAGATGTAAGCACCAGTATTATGTTGAACTCCAGGAAACCTGCGAAGAGAAAGCTGCCCTGCTGGGGACTGAGCTTCTCCCGCGGTCCTGCTGCTCCCTCTCCTCCACGCTGTGACTCATCCATGACAGCCTGC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1304723 401 + 181584905 ttcttagactgactatatatcaagttctccacag-ccctctgtggctaatggctgccatactggacggcaaacactcggaacatttccatcgtcacagacggtctcactgga------------------cCGACTCCCAGCAGCACAGGCCGCACACATCAGTTTCCACCTGCTGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCAGCTTAAAGACATTTCCAAGCTGCTGGAAGTCAGGCATGATGACACGATCAATATGTGGGCCTGAGATATAAGCACCAGTATTGTGTTGAACTCCAGGAAACCTGCAAAGAGAAAGCTGCCCTGCTGGGGACTGAGCTTCTCCCGTGGTCCTGCTGCTCCCTCTCCTCCACGCTGTGACTCATCCATGACAGCCTGC i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1395416 401 + 91010382 ttcttagactgactatatatcaagttctccacag-ccctctgtggctaatggctgccacactggacggcaaacactcggaacatttccatcgtcacagacggtcctatggga------------------cCGACTCCCAGCAGCACAGGCCGCACACATCAGTTTCCACCCACCGCCCACTCTCCCTCTCTTCTGAGTATATTCAGGGGCAGCCACAGGCCCGGCTTAAAGACATTTCCAAGCTGCTGGAAGCCAGGCATGATGACATGATCAATATGTGGGCCTGAGATGTAAGCACCAGTATTATGTTGAACTCCAGGAAACCTGCTAAGAGAAAGCTGCCCTGCTGGGGACTGAGCTTCTCCGGCAGTCCTGCTGCTCCCTCTCCTCCACGCTGTGACTCATCCATGACAGCCCGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204155042 387 + 204313951 ttcttagactgactatataccaagttctccatagccctcccgtggctagtggttgccatactggacggcaaagacttggaacatttctgccatcacgggcagtcctattggacagtcctgATGTGGGAGGCTGACTCCCAGAAGCACAGGCTGCAGAGATCAGTTTCCACCCACGGCCCACTCTCCCCCTCTTCTGAGTATATTTAGGGGCAGCAACAGGcccagcttaaagacatttccgagctgctggaagccaggtgtgatgacatggtcactatct-ggcctgagatgtaagcaccagtgttgtgt-------------------------------gctctgctggggactgAGCTTCTCAGGC-GCCCTGCGGCTCCATCTCCTCCACACTGTGACTCATCCACGACAGCCAGT i calJac3.chr2 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11945320 752 + 42124431 I e papAnu2.chr6 1264582 6789 + 174439528 I a score=221740.000000 s hg38.chr3_KI270937v1_alt 116557 70 + 165607 GACGGTCAGGGCACGGAGGTCATGCCCAAGCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCTAA s panTro4.chr3_GL389630_random 90375 70 - 103936 GACGGTCAGGGCACGGCGGTCATGCCCAAGCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCTAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2444494 70 - 202140232 GACGGTCAGGGCACGGAGGTCACGCCCAAGCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896130 70 - 123690457 AACGGTCAGGGCACGGAGGTCACGCCCAAGCACACACGAGTGAACCACAGAAGGCTGTCCTGGATGCTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476857 70 - 180491593 GACGGTCAGGGCACGGAGGTCATGCCCAAGCACACACGAGTGAACCGGAGAAGGCTGTCCTGGATGCTAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305124 70 + 181584905 AACGGTCAGGGCACGGAGGTCACGCCCAAGCACACACGAGTGAACCGGAGAAGGCTGTCCTGGATGCTAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1271371 70 + 174439528 GACGGTCAGGGCACGGAGGTCACGCCCAAGCACACACGAGTGAACCAGAGAAGGCTGTCCTGGATGCTAA i papAnu2.chr6 I 6789 C 0 s chlSab2.chr4 1395817 70 + 91010382 GACGGTCAGGGCACGGAGGTCACGCCCAAGCACACACGAGTGAACCAGAGAAGGCTGTCCTGGATGCTAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204155429 70 + 204313951 GATGGTCAGAGCACAGAGGCCATGCCCAGGCACATTCGAGTGAACCAGAGAAGGCTGTCCTGGATGCTGA i calJac3.chr2 C 0 I 268 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11945320 752 + 42124431 I a score=127900.000000 s hg38.chr3_KI270937v1_alt 116627 59 + 165607 GCAGTCACTAATTCTGCCCTGGCCTGCTGACCTTCTATGTGGAGAAGAAGTGCACTT------------------CT s panTro4.chr3_GL389630_random 90445 59 - 103936 GCAGTCACTAATTCTGCCCTGGGCTGCTGACCTTCTATGTGGAGAAGAAGTGCACTT------------------CT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2444564 59 - 202140232 GCAGTCACTAATTCTGCCCTAGCCTGTTGACCTTCTATGTGGAAAACAAGTGCACTT------------------CT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896200 59 - 123690457 GCAGTCACTAATTCTGCCCTAGCCTGCTGACCTTCTCTGTGGAAAAGAAGTGCACTT------------------CT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180476927 74 - 180491593 GCAGTCACTAGTTCTGCCCTAGCCTGCTGACCTGCTATGTGGAA---AAGTGCACTTCTGTATAGTTCAGGCCTCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305194 74 + 181584905 GCAGTCACTAATTCTGCCCTAGCCTGCTGACCTTCTATGTGGAA---AAGTGCACTTCTGTATAGTTCAGGCCTCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1271441 74 + 174439528 GCAGTCACTAATTCTGCCCTAGCCTGCTGACCTTCTATGTGGAA---AAGTGCACTTCTGTATAGTTCAGGCCTCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1395887 74 + 91010382 ACAGTCACTAATTCTGCCCTAGCCTGCTGACCTTCTATGTGGAA---AAGTGCACTTCTGTATAGTTCAGGCCTCCT i chlSab2.chr4 C 0 C 0 e mm10.chr13 74327542 746 + 120421639 I e calJac3.chr2 204155499 268 + 204313951 I e canFam3.chr34 11945320 752 + 42124431 I a score=1119525.000000 s hg38.chr3_KI270937v1_alt 116686 442 + 165607 GGTCTCTTTCATATTCTTGATACAGTGAGGAGTATGTCCTACTGCTGTTTACCTCCACATACTGGTGCAGCctcgtatgtttattgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggataaagaaaatgtggtac----atatataccatgaaatactacttggccat-aaaaaaagaatgcaatcatgtcttctgcagccagacggatggaatgggaggtcactatcctaagtgag-----tcagaaggtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatggacacacggagtggactaac----------agactgtgggctccaaaaagcgggaggggtggggatgagcaattacctgctgagtacaacacacacgacttgggtgacaggtacatgaaaagcccag s panTro4.chr3_GL389630_random 90504 453 - 103936 GGTCTCTGTCATATTCTTGATACAGTGAGGAGTATGTCCTACTGCTGTTCACCT-Cagatactggtgcagcctcgtatgtttatagcagcactggtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggataaagaaaatgtggtacatatatatataccatgaaacactactcagccataaaaaaaagaacgcaatcatgtcttctgcagccagacggatggaacgggaggtcactatcctaagtgaagtgactcagaaggtcaagtgtcacacattctcccttggaagtgggagctgaacggtgagtacacatggacacacggagtggactaacag--------agactgggggatccaaaaagcgggaggggtggggatgagcaattatctgctgagtacaacacacacgacttgggtgacgggtacatgaaaagcccag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2444623 442 - 202140232 GGTCTCTTTCATGTTCTTGATACAGTGAGGAGTATGTCCCACTGCTGTTCACCTCCagatactggtgcagcctcgtatgtttatcgcagcactagtcacaatagcaaaatcatggaatcaacctaagtgcccatcaacggacgaccagatgaagaaaatgtggtac----ctatataccattaaatactactcagccat-aaaaaaacaacataatcatgtcttctgcagccacacggatgcaacgggaggtcactatcctaagtgaagtgactcagaaggtcaagtgtcacacattctcacttggaagtgggagctgaaccgtgagtacacatggacacacggagtggactaacag--------agactgggagctccaaaaagcgggaggggtagggatgagcaattacctgctgagtacaacacacacgacttg-------ggtacatgaaaagcccag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896259 449 - 123690457 GGTCTCTTCCATATTCTTGGTACAGTGAGGAGCACATCCTGCTGCTGTTT-CCTCCagatactggtgcagcctcatatgtttattgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggacgaccggatgaagaaaatgtggtac----atatataccatgaaatactactcagccac-aaaaaaagaacgcaatcatgtcttctgcagccacacggatggaaccggaggtcactatcctaagtgaagtgactcagaaggtcaagtgtcactcactt-------gaagtgggcgctgaacggtgagtacacctggacacacggagtggactaacagactggaacagactgggggcttcaaaaagcgggaggggtagggatgagcaattacctgctgggtacaacacacacgacttgggtgatgggtacatgaaaagcccag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477001 431 - 180491593 GGTCTCTTTCATATTCTTGATACAGTGAGGAGTACATCCTACTGCTGTTTACCTC--gatactggtgcagcctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaatggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcaatcatgtcttctgcagccacacagatggaacag---gtcactctcctaagtgaagtgactc--aaggtcaagtgtca--cattcttacttggaagtggaaactgaacggtgagtacacgtggccacacagagtggactaacag--------agactgggggctccaaaaagtgggaggggtggggatgagcaattacctgctgggtacaacatacatgacttgggtg------atgtgaaaagcccag i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305268 417 + 181584905 GGTCTCTTTCATATTCTTGATACAGTGAGGAGTACGTCCTACTGCTGTTTACCTC--gatactggtgcagcctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaatggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-acaaaaataacgcaatcatgtcttctgcagccatgtggatggaacag------------------gaggtcactcagaaggtcaagtgtca--cattctcactt-gaagtgggagctgaatggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgggaggggtggggatgagcaattacctgctgggtacaacatacatgacttgggtg------atgtgaaaagcccag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1271515 432 + 174439528 GGTCTCTTTCATATTCTTGATACGGTGAGGAGTACGTCCTACTGCTGTTTACCTC--GATACTGGTGCAGCCTcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggATGAccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccataaaaaaaataacGCACTCATGTCTTCTACAGCCACGTGGATGGAACAGGAGGTCACTATCC-----TAAGTGACTCAGAAGGTCAAGTGTCA--CATTCTCACTtggaagtgggagctgaatggtGAGTACACGTGGCCACACGGAGTGGACTAAAAG--------AGACTGGGGGCTCCAAAAAGCGGGAGGGGTGGGGATGAGCAATTACTTGCTGGGTACAACATACATGACTTGGGTG------ACGTGAAAAGCCCAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1395961 424 + 91010382 GGTCTCTTTCATATTCTTGATATGGTGAGGAGTACGTCCTACTGCTGTTTACCTC--GATACTGGTGGAGCctcgtatgtttatcgcagcactagtcacaatagcaaagtcatggaatcaacctaagtgcccatcaacggatgaccggacaaagaaaatgtggtac----ataaacaccatgaaa---tactcagccat-aaaaaaataacgcaatcatgtcttctgcagccacgtggatggaacaggaggtcactatcc-----taagtgactcagaaggtcaagtgtca--cattcttacttggaagtggaagctgaatggtgagtacacgtggccacacggagtggactaacag--------agactgggggctccaaaaagcgggaggggtggggatg-------acctgctgggtacaacatacacgacttgggtg------acatgaaaagcccag i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204155767 422 + 204313951 gattTCTTTCATATTCTTGACACAGTAAGGAGTATGTCCTACTGCCGTTTTCCTCCagatactggtgcagcctggtacgttcatcacagcaccaatcacaacagc----------aatccacctacgtgcccattaacagatgat---------------gggcac----atatgcaccgtggaatactactcagacat--aaaaaagaactagatcgtgtctttcccagccacctggatggaacaggaggtcattaccctaagtgaaataactctgaaggtcaactgttgcacattctgacttggaagtgggagctgaactgtgagtatacatggacatatgg-gtagactaatag--------agactcggggctccaaaaagcgggaggggtggggatgagcaattacctactgggtacaacatatacaacttgggggatggggacacgaaaagcccag i calJac3.chr2 I 268 I 342 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11945320 752 + 42124431 I a score=191222.000000 s hg38.chr3_KI270937v1_alt 117128 74 + 165607 actccaccacctcccagt----acatccacacaaagctgcacctgcatccccctagatctgtttttaaaaaaac------aaaa s panTro4.chr3_GL389630_random 90957 74 - 103936 actccaccacttcccagt----acatccacacaaaactgcacctgcatccccctagatctgtttttaaaaaaac------aaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445065 74 - 202140232 actccaccacctcccagt----acatccacacaaaactgcacctgcatccccctagatctatttttaaaaaaac------aaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896708 77 - 123690457 actccaccacatcacagtaaaaacatccacacaaaactgcacctgcatccccctaaatctattttt-aaaaaac------aaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477432 73 - 180491593 actccaccacctcatggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaac------aaaa i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305685 73 + 181584905 actccaccacctcatggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaac------aaaa i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1271947 73 + 174439528 ACTCCACCACCTCACGGT----ACATCCACACAAA-CTGCACCTGCATCCccctaaatctatttttaaaaacac------aaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1396385 73 + 91010382 actccaccacctcacggt----acatccacacaaa-ctgcacctgcatccccctaaatctatttttaaaaaaac------aaaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204156531 73 + 204313951 actccaccac-----agt----acatccacacaaaactgcacctgta--cccctaaatctattaaaataaaaacacacagaaaa i calJac3.chr2 I 342 C 0 e mm10.chr13 74327542 746 + 120421639 I e canFam3.chr34 11945320 752 + 42124431 I a score=171669.000000 s hg38.chr3_KI270937v1_alt 117202 52 + 165607 C----CAGTGCAGGGCCAGGTATGCAGCCAGCCTGCTCACTCCAGAGCGAGTCCAG s panTro4.chr3_GL389630_random 91031 52 - 103936 C----CAGTGCAGGGCCAGGTATGCAGCTAGCCTGCTCACTCCAGAGCGAGTCCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445139 52 - 202140232 C----CAGTGCAGGGCCAGGTATGCAGCCAGCCTGCTCTCTCCAGAGCGAGTCCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896785 52 - 123690457 C----CAGTGCAGGGCCAGGTATGCAGCCCGCCTGCTCACTCCAGAGCGAGACCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477505 52 - 180491593 C----CAGTGCAGGGCCAGGTATGCAGCCAGCCTGCTCACTCCAGAGCGAGTCCAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305758 52 + 181584905 C----CAGTGCAGGGCCAGGTATGCAGCCAGCCTGCTCACTCCAGAGCGAGTCCAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1272020 52 + 174439528 c----cagtGCAGGGCCAGGTATGCAGCCAGCCTGCTCACTCCAGAGCGAGTCCAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1396458 52 + 91010382 C----CAGTGCAGGGCCAGGTATGCAGCCAGCCTGCTCACTCCAGAGTGAGTCCAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204156604 51 + 204313951 CCCAGCAGTGCAGGGCCAGGCACACA----GCCTGTTTGCTCCAGAGTGAG-CCAG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11946072 50 + 42124431 C----CAGCATAAGGCTATGGACACA--CAGCCTGCACACTCCAGAGCGTGTGCAG i canFam3.chr34 I 752 C 0 e mm10.chr13 74327542 746 + 120421639 I a score=840004.000000 s hg38.chr3_KI270937v1_alt 117254 252 + 165607 GCTCTTACCTTCTGCATGCTGAGTCGCAGTTCCGATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTGTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA---AACAACAACA------------AAAAGAGCTAGAATTTAACTTTT---GAAAACCGTTT----TAAAAAAACAAATGGATTTAGTACTACACACAAAAATGTAGCATAGCCGCTCAAGGAGCCTGGAAACGGTGTAA s panTro4.chr3_GL389630_random 91083 255 - 103936 GCTCTTACCTTCTGCATGCTGAGTCACAGTTCCGATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTGTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAAAACAACAACAACA------------AAAAGAGCTAGAATTTAACTTTT---GAAAACCGTTT----TAAAAAACCAAATGGATTTAGTATGACACACAAAAATGAAGCATAGCCGCTCAAGGAGCCTGGAAACTGTGTAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445191 249 - 202140232 GCTCTTACCTTCTGCATGCTGAGTCACAGTTCCCATGTTCTTATGCTTCTTCCATCAGCAAATCTCAATTTCTCAAGATTCGTGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAACA------------AAAAAAGCTAGAATTTAACCTTT---GAAAACCGTGT----TAAAAAACCAAATGGATTTAGAATGACACACAAATATGTAGCACAGCCACTCAAGGAGCCTGGAAACTGTGTAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2896837 249 - 123690457 GCTCTTACCTTCTGCATACTGAGTCGCAGTTCCGATGTTCTTATG---CTTCCATCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA---AACATCAACA------------AAAAAAGCTGGAATTTAACTTTT---GAAAACCGTTT----CAAAAAACCAAATGGATTTAGAATGACATACAAATATGTAGCACAGCCGCTCAAGGAGCCTGGAAACTGTGTAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477557 245 - 180491593 GCTCTTACCTTCTGCATGCAGAGTCGAAGTTCCGACGTTCTTACG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCTCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCTAA------AACAAA-------------AAAAAAGTTAGAATTTAACTTTT---CAAAACTATTT----TAAAAAACCAAATGGATTTAGAATGATACAAAAATACATAGCACAGCCGCTCAAGGAGCTTGGAAACTGCGAAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1305810 246 + 181584905 GCTCTTACCTTCTGCATGCAGAGTCGAAGTTCCGACGTTCTTACG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGAATTTATCTCCTAA------AACAAAA------C-----AAAAAAGCTAGAATTTAACTTTT---CAAAACCGTTC----TAAAAAACCAAATGGATTTAGAATGACACAAAAATACGTAGCCCGGCCGCTCAAGGAGCTTGGAAACTGTGAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1272072 246 + 174439528 GCTCTTACCTTCTGCATGCAGAGTCGAAGTTCCTACGTGCTTACG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGAATTTatctcctaa------aacaaaa------c-----aaaaaagctagaatttaactttt---caaaaccgttc----taaaaaaccaaaTGGATTTAGAATGACACAAAAATACGTAGCACGGCCGCTCAAGGAGCTTGGAAACTGTGAAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1396510 246 + 91010382 GCTCTTACCTTCTGCATGCTGAGTCGAAGTTCCGACGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGA-AGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGAATTTATCTCCTAA------AACAAAA------C-----AAAAAAGCTAGAATTTAACTTTT---CAAAACCATTT----TAAAAAATCAAATGGATTTAGAATGACACAAAAATACGTAGCACGGCCGCTCAAGGAGCTTGGAAACTGCAAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204156655 251 + 204313951 GCTCTTACCTTCTGCATGCTGAGTCGTAGTTCCGATGTTCTTATG---CTTCCGTCAGCAAATCTCAATTTGTCAAGATTCATGACAGATTCTTCCCCAGCATTTGGTTTAATTGGAGGGACTTTATCTCCtaa------aaaaaaaaaaatta-----aaaaaaGCTAGAATTTAACTTTT---GAAAACCACTT----TAAAAACCCTAATGGATTGAGAATGACACACAAATACGTGGCACAGCCACTCGAGGTGCCTGGACAGTGCAG-- i calJac3.chr2 C 0 I 222 s mm10.chr13 74328288 246 + 120421639 GCTCCTACCTTCTGCATGTTTAGGCGTAGTTCTGATGTTCTTATA---CTTCCATCGGCAAATCTCAACTTGTCAAGATTCATAACCGATTCTTCTCCAGCATTTGCCTTAATTGAAGGAACTTTATCTCCTTA------------A------------AAGAAAGCCAGAATTTAACATATGGGGGAAATCACTTATGGGGGAAAAAAAGAAAGATTGTGAATGCCACTCAAAT-TATATAATAGCCATTCCAGGAGTTTGGAAAGCATAGAC i mm10.chr13 I 746 C 0 s canFam3.chr34 11946122 191 + 42124431 -GGCTTACCTTCTGCATGTTGAGTCGTAGTTCAGATGTTCTTACA---CTTCCATTGGCAAATCTCAGTTTGTCAAGATTCATGACAGACTCTTCCCCGGCATTTGGTTTAATCGGGGGAATTTTATCTCCTTA------AAAAACA------CACAGACAAAAAGTGAGAATTTA----TT---GGA----GTTT----GGAAAA--------------------CATACACAT---------------------AATCTGG----------- i canFam3.chr34 C 0 C 0 a score=249251.000000 s hg38.chr3_KI270937v1_alt 117506 86 + 165607 GTCTCCTGAGCTAACAC--ACTGCCAACCCACCCTACATCTGAGGCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA s panTro4.chr3_GL389630_random 91338 86 - 103936 GTCTCCTGAGCTAACAC--AGTGCCAGCCCACCCTACATCTGAGGTCATCTGTTGAGTTGGGGCCAATTTTAAAGAACAGACATAAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445440 86 - 202140232 GTCTCCTGAGCTAACAC--ACTGCCAGCCCACCCTACATCTGAGGCCATCTGTTGAGTTGGGAACAATTTTAAAGAACAGACATAAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2897086 86 - 123690457 GTCTCCTGAGCTAACAC--ACTGCCAGCCCACCCTACATCTGAGGCCATCCGTTGAGTTGGGGCCAATTTTAAAGAACAGACATGAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477802 85 - 180491593 GTCTTCTCAGCTAACAC--ACTGCCAGCCCACCCTACATCTGAGGCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACATACAT-AAA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1306056 85 + 181584905 GTCCCCTCAGCTAACAC--ACTGCCAGCCCACCCTACATCTGAGGCCATCTGTTGAGTTGGGGCCAATTTTAAAGAACATACAT-AAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1272318 85 + 174439528 GTCTTCTCAGCTAACAC--ACTGCCAGTCCACCCTACATCTGAGGTCATCTGTTGAGTTGGGGCCAGTTTTAAAGAACATACAT-AAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1396756 85 + 91010382 GCCTCCTCAGCTAACAC--ACTGCCAGCCCACCCTACATCTGAGGCCATCTGTTGAGCTGGGGCCAGTTTTAAAGAACATACAT-AAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157128 84 + 204313951 GTCTACTGAGCTAACAC--ACGGCCAG-CAACCCCACAACTGAGGCCATCTACTGAGCTGGGGCCAATTTTAAAGAACATACAG-AAA i calJac3.chr2 I 222 C 0 s mm10.chr13 74328534 82 + 120421639 AGAATCTGAACCAACACTGTTTGGCA-CCAACCTAAGGAATGAGAC-----ACTGACTCAGAGTCAGTCTTAAGACATATACAGAGAA i mm10.chr13 C 0 I 22 s canFam3.chr34 11946313 57 + 42124431 -------------------ACTGCC--CTAACCCTAAA----GAACCACATACTGACTTGGGGCC------AAAGAGCAAACTTAAAA i canFam3.chr34 C 0 C 0 a score=268437.000000 s hg38.chr3_KI270937v1_alt 117592 87 + 165607 GGCAAA-ACTGTTGGCACACAGTAGATATCCATTAAGTGATCTTAGAGTGAATAAACTAGAAATCATCTCTAAAATTAAAAAATTAAA- s panTro4.chr3_GL389630_random 91424 87 - 103936 GGCAAA-ACTGctggcacacagtagatatccattaagtgatcttagagtgaataaaCTAGAAATCATCTCTAAAATTAAAAAATTAAA- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445526 87 - 202140232 GGCAAA-ACTGTTGGCACACAGTAGATAGCCATTAAGTGATCTTAGAGTGAATAAACTAGAAATCATCTCTAAAATTAAAAAATTAAA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2897172 86 - 123690457 CGCAAA-ACTGTTGGCACACAGTAGATATCCATTAAATAATCTTAGAGTGAATAAACTAGAAATCATCTTTAAAATTAAAAAATT-AA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477887 86 - 180491593 GGCAAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTTAGAGTGAATAAACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1306141 86 + 181584905 GGCAAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTTAGAGTGAATAAACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1272403 86 + 174439528 GGCAAA-ATTGTTGGCAGACAGTAGATATCCATTAACTTATCTTAGAGTGAATAAACTAGAAatcatctctaaaattaaaaaatt-aa- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1396841 86 + 91010382 GGCAAA-ATTGTTGGCACACAGTAGATATCCATTAACTTATCTTAGAGTGAATAAACTAGAAATCATCTCTAAAATTAAAAAATT-AA- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157212 87 + 204313951 GGCAAACATTGTTGACACACAGTAGAAAGCCATTATGAGATCTTGGAGTGAACAAGCTAGACATCACCTCTAAAATTAAAAAATT-AA- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11946370 81 + 42124431 -ACAAA-ATTTCTGGCAAAGAGTAGGTATCCAATATGAAATCT----ATGAACAAATCAGAATCCATTCCT-AAGTTAAAAAATT-AGA i canFam3.chr34 C 0 I 230 e mm10.chr13 74328616 22 + 120421639 I a score=386440.000000 s hg38.chr3_KI270937v1_alt 117679 143 + 165607 ATGTAggccaggtgcagtggctcacgcctgtaatcccagcactttaggaggctga---ggtaggtgaagcactt--------gaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctactaaaaacacaaaaattatc---------------------------------------------- s panTro4.chr3_GL389630_random 91511 143 - 103936 ATGTAggccgggtgcggtggctcacgcctgtaatcccagcactttaggaggctga---ggtaggtgaagcactt--------gaggtcaggagttcaagagcagcctggccaacgtggcaaaacctcatttctactaaaaacacaaaaattatc---------------------------------------------- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445613 143 - 202140232 ATGTAggccgggtgcggtggctcacgcctgtaatcccagcactttaggaggccga---ggtaggtggatcactt--------gaggtcagcagctcaagagcagcctggccaatgtggcaaaccctcatttctactaaaaatacaaaaattatc---------------------------------------------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2897258 143 - 123690457 ATGTAggccgggggcggtggctcacgcctgtgatcccagcactgtaggaggctga---ggtaggtggagcactc--------gaggtcaggagttcaagagcagcctggccaacgtggtaaaacctcatttctactaaaaacacaaaaattaAT---------------------------------------------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180477973 143 - 180491593 ATGAAggccaggtgcggtagctctcgcctgtaatcccagcactttaggaggccga---gataggtggatcactt--------gaggtcaggagttcaagtgcagcctggccaacgtggcaaaacctcgtttctactaaaaacacaaaaattatc---------------------------------------------- i rheMac3.chr6 C 0 I 1935 s macFas5.chr6 1306227 143 + 181584905 ATGAAggccaggtgcggtagctctcgcctgtaatcccagcactttaggaggccga---gataggtggatcactt--------gaggtcaggagttcaagagcagcctggccaacatggcaaaacctcatttctactaaaaacacaaaaatgacc---------------------------------------------- i macFas5.chr6 C 0 I 46 s papAnu2.chr6 1272489 151 + 174439528 atgaaggccaggtgcggtagctctcacctgtaatcccagcactttaggaggccaa---gataggtggatcacttgaggtcaggaggtcaggagttcaagagcagcctggccaacatggcaaaacctcatttctactaaaaacacaaaaatgacc---------------------------------------------- i papAnu2.chr6 C 0 I 46 s chlSab2.chr4 1396927 143 + 91010382 ATGAAggccaggtgcggtagctctcgcctgtaatcccagcactttaggaggccga---gataggtggatcactt--------gaggtcaggagttcaagagcagcctggccaacatggcaaaacctcatttctactaaaaacacaaaaatgacc---------------------------------------------- i chlSab2.chr4 C 0 I 46 s calJac3.chr2 204157299 192 + 204313951 ATGTAGCCGgggcagggtgtgtcacacctgtaatcccagcacttcaggaggccgagatggtggatggatcactt--------gaggtcaggcatttgagaccaacctggccaacatggcaaaactttgtttctactaaaaatacaaaaattagacaggtatggtggtgtgcacctgtaaacccagctacttgggagactg i calJac3.chr2 C 0 C 0 e mm10.chr13 74328616 22 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I a score=156995.000000 s hg38.chr3_KI270937v1_alt 117822 70 + 165607 tggcatgagaactgctttaacccgaaaggtggaggttgcagtgagccgagatcgcgccactgcactccag s panTro4.chr3_GL389630_random 91654 70 - 103936 tggcatgagaactgcttcaacccgaaaggtggaggttgcggtgagccgagatcgtgccacggcactccag i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445756 70 - 202140232 tggcatgagaactgcttgaacctgaaaggcggaggttgcagtgagccgagatcacgccactgcactccag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2897401 70 - 123690457 TATcatgagaactgcttaaacctgaaagggggaggatgcagtgagccgagatcgtgccactgcactccag i nomLeu3.chr11 C 0 M 529 s macFas5.chr6 1306416 70 + 181584905 aggcacgagaactgcttgaacctgaaaggtgaaggttgcagtgagctgagatcgcgccactgcactccag i macFas5.chr6 I 46 C 0 s papAnu2.chr6 1272686 70 + 174439528 aggcacgagaactgcttgaacctgaaaggtgaaggttgcagtgagctgagatcgcgccactgcactccag i papAnu2.chr6 I 46 C 0 s chlSab2.chr4 1397116 70 + 91010382 aggcacgagaactgcttgaacctgaaaggtgaaggttgcagtgagctgagatcgcgccattgcgctccag i chlSab2.chr4 I 46 C 0 s calJac3.chr2 204157491 70 + 204313951 aggcatgagaactgcttgaacccggaaggtggaggttgcagtgagctgagactacaccactgcactccag i calJac3.chr2 C 0 C 0 e mm10.chr13 74328616 22 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=89899.000000 s hg38.chr3_KI270937v1_alt 117892 82 + 165607 cctgggcaacagagcgagaccctgtcttac-aaaaaaaaaaaaT---TAAATGTATACAGATTTATATACATTAAGTGTATATAAA s panTro4.chr3_GL389630_random 91724 80 - 103936 cctgggcaacagagtgagaccctgtcttac---aaaaaaaaaaT---TAAATGTATACAAATTTATATACATTAAGTGTATACAAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445826 85 - 202140232 cctgggcaacagagcgagaccctgtcttac-aaaaaaaataaataaaTAAATGTATACAAATTTATATACATTAAGTGTATATAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1306486 74 + 181584905 cct------cggagtgagacgctgtcttta---aaaaaaaaaaa---aaaaaGTATACAAATTTATACATATTAAGTGTATATAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1272756 75 + 174439528 cctgcacaacagagtgagaccttgtcttt--------aaaaaaa---aaaaagtatacaaatttatacatattaagtgtatataaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397186 76 + 91010382 cctgcacaacagagtgagaccctgtcttt-------aaaaaaaa---aaaaaGTATACAAATTTATACATATTAAGTGTATATAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157561 65 + 204313951 cctgggcaacagagtgagactctgtctttaaaaaaaaaaaaaaT---TAAATGTATACAAATTTATAT------------------ i calJac3.chr2 C 0 C 0 e mm10.chr13 74328616 22 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=5922.000000 s hg38.chr3_KI270937v1_alt 117974 3 + 165607 TGT s panTro4.chr3_GL389630_random 91804 3 - 103936 TGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445911 3 - 202140232 TGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1306560 3 + 181584905 TGT i macFas5.chr6 C 0 I 26 s papAnu2.chr6 1272831 3 + 174439528 tgt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397262 3 + 91010382 TGT i chlSab2.chr4 C 0 C 0 s mm10.chr13 74328638 3 + 120421639 TGT i mm10.chr13 I 22 C 0 e calJac3.chr2 204157626 0 + 204313951 C e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=3675.000000 s hg38.chr3_KI270937v1_alt 117977 8 + 165607 CACTCCAC s panTro4.chr3_GL389630_random 91807 8 - 103936 CACTCCAC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445914 8 - 202140232 CACTCCAC i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 1272834 6 + 174439528 --gtgtat i papAnu2.chr6 C 0 I 20 s chlSab2.chr4 1397265 6 + 91010382 --GTGTAT i chlSab2.chr4 C 0 I 20 s calJac3.chr2 204157626 7 + 204313951 -ACTCCAC i calJac3.chr2 C 0 C 0 s mm10.chr13 74328641 8 + 120421639 TACTCCAG i mm10.chr13 C 0 C 0 e canFam3.chr34 11946451 230 + 42124431 I e macFas5.chr6 1306563 26 + 181584905 I e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=257487.000000 s hg38.chr3_KI270937v1_alt 117985 151 + 165607 TAACGGGAAAAAAT-GA--CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCGCCCCAC-TGTCCTTCACATTAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGCAAGTCACCTGCTGATTTGGACTGT--TGTGTGCTCTCACCTATACTTCAAGAT s panTro4.chr3_GL389630_random 91815 151 - 103936 TAAGGAGAAAAAAA-GA--CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-TGTCCTTCGCATTAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGAAAGCCACCTGCTGATTTGGACTGT--TGTGTGCTCTCACCTATACTTCAAGAT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2445922 149 - 202140232 TAAGGGGAAAAAA--GA--CACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-TGTCCTTTGCATCAGGGGGAGGAAGGTGGCTGC----TGTGTGCTTGAAAGTCA-CTGCTGATTTGGACTCT--TATGTGCTCTCACCTAACGTTCAAGAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1306589 154 + 181584905 TAAGGGGAAAAAAAAAAACCACCTTCCAGATGGTGGTCCCAA--GGGGCCGGCCACCCCAC-CGTCCTTCGCATAAGGGGGAGGAAGGTGGTTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCT--TGTGTGCTCTCACCTACACTTCAAGAT i macFas5.chr6 I 26 C 0 s papAnu2.chr6 1272860 152 + 174439528 taaggggaaaaaaagga--cacCTTCTAGATGGTGGTCCTGA--GGGGCCGGCCACCCCAC-CGTCCTTCACATAAAGAGGAGGAAGGTGGCTGC----TGTGTGCTTGAAAGTCACCTGCTGATTTGGACTCT--TGTGTGCTCTCACCTACACTTCaagat i papAnu2.chr6 I 20 C 0 s chlSab2.chr4 1397291 152 + 91010382 TAAGGGGAAAAAAAGGA--CACCTTCCAGATGGTGGTCCCAA--GGCGCTGGCCACCCCAC-CGTCCTTCGCATCAGGGGAAGGAAGGTGGCTGC----TGTGTGCCTGAAAGTCACCTGCTGATTTGGACTCT--TGTGTGCTCTCACCTACAATTCAAGAT i chlSab2.chr4 I 20 C 0 s calJac3.chr2 204157633 149 + 204313951 TAAGGGAAAAAA---GA--CACC-TCCAGATGGTAATCCCGA--GGGGCTGGCCACCCCAC-CATCCTTTGCATCA-GGGGAGGAAGGTGGCCGC----TGTGTGCTTGAAAGTCACTTGCTGATTCAAATTCTTGTGTGTGCTCTCACCTAGACTTCAAGAT i calJac3.chr2 C 0 C 0 s mm10.chr13 74328649 153 + 120421639 TAAGG-----AAATTGT--TACCCTTAAGATAGTGGTCTCAATTTGAGATGTTAGCCTCACACGTTTTCTGATGAAGGAATAAACAGGTAGCTATCCTATGTGTCTTGAAAAGCTGCCTGCTGGTCTTGACTCT--TAAGTGCTCTTACA-AAACCTCAAGAT i mm10.chr13 C 0 I 539 e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=32369.000000 s hg38.chr3_KI270937v1_alt 118136 31 + 165607 TTGCAA---ttttttttttttttttttgagatgg s panTro4.chr3_GL389630_random 91966 26 - 103936 TTGCAA--------tttttttttttttgagatgg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446071 34 - 202140232 TTGAAttttttttttttttttttttttaagatgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1306743 23 + 181584905 TTGCAA-----------ttttttttttgagatgg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273012 23 + 174439528 ttgcaa-----------ttttttttttgagatgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397443 25 + 91010382 TTGCAA---------ttttttttttttgagatgg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157782 24 + 204313951 TTGCAA----------Cttttttttttgagatgg i calJac3.chr2 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2897471 529 - 123690457 M a score=147646.000000 s hg38.chr3_KI270937v1_alt 118167 63 + 165607 aattttgctctgtagcccaggctggagtgcagtggcaccatctcggctcactgcaacctccac s panTro4.chr3_GL389630_random 91992 63 - 103936 aattttgctctgtagcccaggctggagtgcggtggcaccatctcggctcactgcaacctccac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446105 63 - 202140232 aattttgctctgtagtccaggctggagtgcagtggcaccatctcagctcactgtaacctccac i ponAbe2.chr3 C 0 M 336 s nomLeu3.chr11 2898000 63 - 123690457 aattttgctctgtagcccaggctggagtgcagtgacaccatcttggctcactgcaacctccac i nomLeu3.chr11 M 529 C 0 s macFas5.chr6 1306766 63 + 181584905 aattttgctctgtagcccaggttggagtgcactggcaccatctcggctcactgcaacctccac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273035 63 + 174439528 aattttgctctgtagcccaggctggagtgcattggcaccatctcggctcactgcaacctccac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397468 63 + 91010382 aattttgctctgtagctcaggctagagtgcactggcaccatctcgactcactgcaacctccac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157806 61 + 204313951 aattt--ctttgtagcccagtctggagtgcagcggcaccatctcggctccctgcaacctccac i calJac3.chr2 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=110099.000000 s hg38.chr3_KI270937v1_alt 118230 67 + 165607 ctcctggttcaagcaatcctcctgcctcagactctggagtagatgggactacaggagtttgcaacca s panTro4.chr3_GL389630_random 92055 67 - 103936 ctcctggttcaagcaatcctcctgcctcagactctggagtagatgggactacaggagtatgcaacca i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2898063 67 - 123690457 ctcctggttcaggcaatcctcctgcctcagactccggagtagctgggactacaggagtacgccacca i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1306829 67 + 181584905 ctcctggttcaagcaatccttctgcctcagtctccggagtagctgggactacaggagtatgccacca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273098 67 + 174439528 ctcctggttcaagcaatcctcctgcctcagtctccggagtagctgggactacaggagtatgccacca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397531 67 + 91010382 ctcctggttcaagcaatccttatgcctcagcctctggagtagctgggactagaggagtgtgccacca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157867 67 + 204313951 ctcctagttcaagtgatcctcctgcctcagcctcccaagtagctgggactactagagtgtttcacca i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2446168 336 - 202140232 M e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=180763.000000 s hg38.chr3_KI270937v1_alt 118297 79 + 165607 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttggccaggctggtctcgaactcctgacctca s panTro4.chr3_GL389630_random 92122 79 - 103936 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttggccaggctggtctcgaactcctgacctca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446506 81 - 202140232 TAcctgggtaatgtttgtatttttcagtagagatggggtttcaacaatgtggacagggctggtctcgaactcctgacctca i ponAbe2.chr3 M 336 C 0 s nomLeu3.chr11 2898130 79 - 123690457 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttggccaggctggtctcgaactcctgacctca i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1306896 79 + 181584905 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttgaccaggctggtctcaaactcctgacctca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273165 79 + 174439528 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttggccaggctggtctcaaactcctgacctca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397598 79 + 91010382 tacctggctaatttttgta-ttttcagtagagatggggtttc-accatgttgaccaggctggtctcaaactcgtgacctca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204157934 79 + 204313951 tgtctggctaatttttctg-tttttagtagagatggggcttc-cccatgttggccaggctggtctcaaactcctgatcaca i calJac3.chr2 C 0 I 375 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=201839.000000 s hg38.chr3_KI270937v1_alt 118376 90 + 165607 ggtgagccacctgcctcagcctcccaaagtgctgggatcacatgtgtgagctgctgcgcacggccAAGATTTGCAACTCTTGTGTTTCCA s panTro4.chr3_GL389630_random 92201 90 - 103936 ggtgagccacctgcctcagcctcccaaagtgctgggatcacatgtgtgagctgctgcgcatggccAAGATTTGCAACTCTTGTGTTTCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446587 90 - 202140232 ggtgagccacctgcctcggcctcccaaagtgctgggatcacatgtgtcagccaccgcgcacggccAAGATTTGCAACTCTTATGTTTCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898209 90 - 123690457 ggtgagccacctgcctcggcctcacaaagtgctgggatcacatgtgtgagccaccacgcacggccAAGATTTGCAACTCTTGTGTTTCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1306975 90 + 181584905 ggtgatccacctgcctcggccttccaaagtgctgggatcacaagtgtgagccactgtgcacagccGAGATTTGCAACTCTTGTGTTTCTA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273244 90 + 174439528 ggtgagccacctgcctcggccttccaaagtgctgggatcacaagtgtgagccactgtgcacagccgaGATTTGCAACTCTTGTGTTTCTA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397677 90 + 91010382 ggtgagccacctgcctcggcctcccaaagtgctgggatcacaagtgtgagccactgcgcacagccGAGATTTGCAACTCTTGTGTTTCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155516 90 - 204313951 ggtgatgcacctgcatcagcttcccagagtgctgggattacatgtataagccactgcacttggGCAAGATGTGCAACTCTTGTGTTTCTA i calJac3.chr2 n 375 C 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946451 230 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=237842.000000 s hg38.chr3_KI270937v1_alt 118466 129 + 165607 AGATGTCTTGAAAAAAGTTTTAAAG-----GTTTTTTTTT---TTTATAAAATTAT-----ATGTATTTTTTCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCTGTCCCGCCT s panTro4.chr3_GL389630_random 92291 128 - 103936 AGATATCTCGAAAAAAGttttaaa------gttttttttt---tttataaaattat-----atatattttttCTTCAATAGGTAACACATGCAGGAGATAGGAGGTATGAAA---------TGCAGGAGTCAAACAGGCCCTGCCCTGCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446677 130 - 202140232 AGATGTCTT-AAAAAGGttttaaa------gtttttttttatatatataacatttt-----atatatattttCTTCAACAGGTAACACATGCAGGAGACAGGAGGCATGAAA---------TGCAGGAGTCAAACAGGCCTCACCCCACCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898299 125 - 123690457 AGATGTCTTGAAAAAAATTGTAAA------GTTTTTTTTT------ATAACATTAT-----ATATATATTTTCTTCAATAGGTAACACATGCAGGAGGTAGGAGGTATGAAA---------TGCAGGAATCAAACAGGCCCTGCCCCGCCC i nomLeu3.chr11 C 0 I 226 s macFas5.chr6 1307065 122 + 181584905 AGATGTCTTGAAAAAAGTTTTAAA------GTTTTTTTA-------ATAACATTAT-----ATATA--TTTTCTTCAACAGATAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCAAACAAACCCCGCCCCACCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273334 120 + 174439528 AGATGTcttcaaaaaagttttaaa------gttcttttt-------ataacattat-----atata--ttttcttcaacaGGTAATACATGCAGAAGGTAGGAGGTATGAAA---------TGCA-GAGTCAAACAGG-CCCGCCCCGCCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1397767 122 + 91010382 AGATGTCTTGAAAAAAGTTTTAAA------GTTCTTTTT-------ATAACATTAT-----ATATA--TTTTCTTCAACAGGTAACACATGCAGAAGGTAGGAGGTATGAAA---------TGCAGGAGTCACACAGGCCCCGCCCCACCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155606 119 - 204313951 AGATGTCTTGAAAAAAGTTTTAA-------GTTTTTTGT-------ATAACTTTAT-----GCATA--TTTTCTTCAATAGTTAGTACATGCAGGAGGTAGGAGGTATGAAA---------TGCAGGGGACACACAGGTCATG--CTGCCC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11946681 132 + 42124431 AAATGTTTTGAAAAC--TTTTAAAGATGTTGTTTTTTTA-------ATGACATGGTTTGAAATGAA--TTTTCTTCCATAGGTAATATGGGCACAAGGTATGAAATGAGGAAACAAGGATTTGCAGG---CAAAGTAGGGTTGCTC----- i canFam3.chr34 I 230 C 0 e mm10.chr13 74328802 539 + 120421639 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=139615.000000 s hg38.chr3_KI270937v1_alt 118595 77 + 165607 ACCG----CCTCTCCTCGGGACCAGGCTGTGGGTCTCTTGAC-GGTCTGCTCAAATGCTTCTAGGCTTGCTGGTGTCTCTTT s panTro4.chr3_GL389630_random 92419 77 - 103936 ACCG----CCTCTCCACGGAACCTGGCTGTGGGTCTCTTGAG-GATCTGCTCAACTACTTCCAGGCTTGCTGGTGTCTCTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446807 77 - 202140232 ACTG----CCTCTCCACGGGACCAGGCTGTGGGTCTCTTGAG-GGTCTGCTCAAATGCTTCTAGGCTTGCTGGTGTTTCTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898650 77 - 123690457 ACCG----CCTCTCCCTGGGCCCAGGCTGTGGGTCTCTTGAG-GGTCTGCTCAAATGTTTCTAGGCTCGCTGGTGTTTCTTT i nomLeu3.chr11 I 226 C 0 s macFas5.chr6 1307187 77 + 181584905 ACCG----CCTCTCCAGGGGACCAGGGTGTGGGTCTCTTGAG-GGCCTGCTCAAATGCTTCTAGGATTGCTGGTGTTTCTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1273454 73 + 174439528 ACCG----CTCCCC--AGGGACCA-GGTGTGGGTCTCTTGAG-GGCCTGCTC-AATGCTTCTAGGATTGCTGCTATTTCTTT i papAnu2.chr6 C 0 M 787 s chlSab2.chr4 1397889 73 + 91010382 ACCA----CCTCCCCAGGGGACCAGGGTGTGAGGCTCTTGAG-G----GCTCAAATGCTTCTAGGATTGCTGGTGTTTCTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155725 75 - 204313951 ACTG----CCTCTCCAAAGGACC--GCGAGGGGCCTCCTGAG-GGTCTGCTCACATGCTTCTAGGCTTGCTTCTGTTTCTTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11946813 82 + 42124431 ACAGTAGCTCTCTACAAGGAGTGAGGGCACTGGTCTATCATGCAAACCACCCCAGCTCTTCCAGGCCAGCTGTGGTTTCTTC i canFam3.chr34 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=60650.000000 s hg38.chr3_KI270937v1_alt 118672 33 + 165607 TCCTTTTGTTTATAACGCTTTA-AAAATTGATCA s panTro4.chr3_GL389630_random 92496 33 - 103936 TCCTTTTGTTTATAACGCTTTA-AAAACGGATCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446884 33 - 202140232 TCCTTTTGTTTATAATGCTTTA-ACAATTGATCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898727 33 - 123690457 TCCTTTTGTTTATAATGCTTTA-AAAATGGATCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307264 33 + 181584905 TCCTTTTGATTATAATGCTTTA-AAAATTGATCA i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1397962 33 + 91010382 TCCTTTTGATTATAACGCTTTA-AAAATTGATCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155800 31 - 204313951 TCCTTTTGTTTAT--TGCTTTA-AAAATTGATCA i calJac3.chr2 C 0 C 0 s canFam3.chr34 11946895 34 + 42124431 TGCTTTTGTTTGTAATGTATTAGAAAAGTGATTA i canFam3.chr34 C 0 I 149 e mm10.chr13 74328802 539 + 120421639 I e papAnu2.chr6 1273527 787 + 174439528 M e rheMac3.chr6 180478116 1935 - 180491593 I a score=175255.000000 s hg38.chr3_KI270937v1_alt 118705 118 + 165607 TCCATTAAAATTGACTTTTTTCTTTCGGTGGACAGTTCTACAGtttcttttttc--ttttttttttttgagacagtgtctcctccctctgttgcccaggctggagtgcagtggtgtgatc s panTro4.chr3_GL389630_random 92529 120 - 103936 TTCATTAAAATTGACTTTTTTCTTTCGATGGACAGTTCTACAGtttcttttttcttttttttttttttgagacagtgtctcctccctctgttgcccaggctggagtgcagtggtgtgacc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2446917 114 - 202140232 TTCAGTAGAATTGACTTTTTTCTTTTGGTGGGCAGTTCTACAAtttattttttc------ttttttttgagagagtgtctcctacctctgttttccaggctggagtgcagtggtgtgatc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898760 119 - 123690457 TTCATTAAAATTGACTTTTTTCTTCTGGTGGACAGTTCTACAAtttattttttc-ttttcttttttttgagacaatgtctcttccctctgttgcccaggctggagtggagtggtgtgatc i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307297 115 + 181584905 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACCGCTCTACAAtttcttttttc-----ttttattttgagacagcgtctcctccctctgttgctcaggctggagtgcagtggtatgatc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1397995 114 + 91010382 TTCAGTAAAATTGACTTTTTTCTTTCAGTGGACAGTTCTACAAtttcttttttc-----tttttttttgagacagtgtctcctccctctgttgctcaggctgga-tgcagcggtgtgatc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 155831 114 - 204313951 TTCAGTAAAATTGACTTTTTTCTTTTGGTGCACAGTTCTATAAtttctttgttt------atttttttgagatagtgtctcctctacctgtcacccagcctggagtgcaatggtgtgatc i calJac3.chr2 C 0 n 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946929 149 + 42124431 I e papAnu2.chr6 1273527 787 + 174439528 M e rheMac3.chr6 180478116 1935 - 180491593 I a score=346489.000000 s hg38.chr3_KI270937v1_alt 118823 265 + 165607 tcggctcacagcaacctccgccttctaggctccaacaatcctcccacctcagcctcccaagtagctgggactacccaagtgtgagccaccatgcccagctaatttttgtatttctggtagagacggggtttcaccaccttgcccaagctggtctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattataggtgtgagccactgcacccggccTCAGTTCTACCGATTTTAACACATGGATAG s panTro4.chr3_GL389630_random 92649 265 - 103936 tcggctcactgcaacctccgccttctaggctccagcaatcctcccacctcagcctcccaagtagctgggactacccaagtgtgagccaccatgcccagctaatttttgtatttttggtagagacggggtttcaccaccttgcccaagctggtctcgaactcctgagctcaagcaatcggcctgccttggcctcccaaagtggtgggattataggtgtgagccactgcacccagccTCAGTTCTACCGATTTTAACACATGGATAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447031 265 - 202140232 tcggctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggactacccaactgtgagccaccatgcccagctgctttttgtatttttggtagagacggggtttcaccaccttgcccaagctggtctcgaactcctgagcttaagcaatctgcttgcctcggcctcccaaagtggtgggattataggcgtgagccactgcacccagccTCAGTTCTACCAATTTTAACACACGTATAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2898879 265 - 123690457 tcggctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggactacccaagtgtgagccaccatacccagctaatttttgtatttttggtagagacggggtttcaccaccttgcccaagctggtcttgaactcctcagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcgcgagccactgcacccagccTCAGTTCTACCAATTTCAATGCATGTATAG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307412 265 + 181584905 tcggctcactgcaacctccgccttcaaggctccagcaatcctcccacctcagcctcccaagtagctgggactacactggtgtgagccaccatgcccagctaatttttgtattttttgcagagacggggttttaccaccttgcccaagctggtcttgaactcctgagctcaagcaatctgcctgcctcggcctcccaaagtggtgggattataggcatgagccactgcgcccagccTCAGTTCTACCAACTTTAACACATGTATAG i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1398109 265 + 91010382 tcagctcactgcaacctccgccttccaggctccagcaatcctcccacctcagcctcccaagtagctgggactacactggtgtgagccaccatgcccagctaatttttgtattttttgcagagacggggctttaccaccttgcccaagctggtcttgaactcctgagctcaagcaatctgcctgcctcagcctcccaaagtggtgggattataggcatgagccactgcacccagccTCAGTTCTACCAACTTTAACACATGTATAA i chlSab2.chr4 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e calJac3.chr2 155945 0 - 204313951 I e canFam3.chr34 11946929 149 + 42124431 I e papAnu2.chr6 1273527 787 + 174439528 M e rheMac3.chr6 180478116 1935 - 180491593 I a score=332308.000000 s hg38.chr3_KI270937v1_alt 119088 205 + 165607 atgcatgtaac-----cactttgggaggctgagacaggaggatcacttgaggtcaggagttcaagaccaccctgggcaacacagggagaccctgtccctagaatacatttttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactcaagcctgggtgacagagggagactatgtctaaaaaTACACATATATATA s panTro4.chr3_GL389630_random 92914 204 - 103936 ATGCATGTAAC-----cactttgggaggctgagacaggaggatcacttgaggtcaggagttcaagaccatcctgggcaacacagggagaccctgt-cctagaatacatttttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactcaagcctgggtgacagaggaagactatgtctaaaaaTACATATATATTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447296 205 - 202140232 ATGCATGTAAC-----cactttgggaggctgagacaggaggatcacttgaagtcaggagttcaagaccaacctgggcaacacagggagaccgtgtccctagaaaacaattttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcactccagcccgggcgacagaggcagACTATGTCTAAAAATACAGatatatata i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2899144 205 - 123690457 ATGCATGTAAC-----cactttgggaggctgagacaggaggatcacttgaggtcaggagttcaagaccatcctgggaaacacagggagaccctgtccctagaaaacatttttaaaaattagccagatgtggtggcgtgcacctgatcgtaccactgcgctccagcctgggcgacagagggagactatgtctaaaaatatacatatatata i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307677 197 + 181584905 ATGCATATAAC-----cactttgggaggctgagacaggaggatcacttgacgccaggagttcaaaaccatcctaggcaacacagggagaccctgtccctatgaaacatttttaaaaattagccatgtgtggtggcgtgcacctgaccgtaccactgcactccagcctgggcgacagagggagactatctctaaaaaTATGTA-------- i macFas5.chr6 C 0 I 1 s chlSab2.chr4 1398374 199 + 91010382 ATGCATGTAAC-----cactttgggaggctgagacaggaggatcacttgaggccaggagttcaagaccatcttgggcaacacagggagactctgtccctacaaaatatttttaaaaattagccatgtgtggtggcgtgcacctgatcgtaccactgcactccagcctgggcgacagagggagactatctctaaaaaTATGTATT------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158388 210 + 204313951 atacatgtaatcccagcactctgggaagctgatgcaggtgcatcacctgaggccaagagttcaagaccatccggggtaacacagggagaccctgtccctacaaaaaatgtttaaaaattagccaggtgtggtggcgtgcacctgATCATACCACTGCACTCCAGCCTGGGCGACAGAGGGAGACTATCTCTAAAAACACATATCTATGTA i calJac3.chr2 I 375 C 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946929 149 + 42124431 I e papAnu2.chr6 1273527 787 + 174439528 M e rheMac3.chr6 180478116 1935 - 180491593 I a score=2548.000000 s hg38.chr3_KI270937v1_alt 119293 1 + 165607 T s panTro4.chr3_GL389630_random 93118 1 - 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447501 1 - 202140232 t i ponAbe2.chr3 C 0 I 30 s nomLeu3.chr11 2899349 1 - 123690457 t i nomLeu3.chr11 C 0 I 37 s macFas5.chr6 1307875 1 + 181584905 T i macFas5.chr6 I 1 C 0 s papAnu2.chr6 1274315 1 + 174439528 T i papAnu2.chr6 M 787 C 0 s chlSab2.chr4 1398573 1 + 91010382 T i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158598 1 + 204313951 T i calJac3.chr2 C 0 C 0 e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946929 149 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=1454.000000 s hg38.chr3_KI270937v1_alt 119294 18 + 165607 -----TTT--TGGG-----GGGGTCGGGGG s panTro4.chr3_GL389630_random 93119 20 - 103936 -----TTTTCTGGG-----GGGGGCGGGGG i panTro4.chr3_GL389630_random C 0 C 0 s nomLeu3.chr11 2899387 16 - 123690457 -----TTT--TGGG-----GGGGGGGCG-- i nomLeu3.chr11 I 37 C 0 s macFas5.chr6 1307876 13 + 181584905 -----TTT--TGGG-----GGGGGG----- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274316 10 + 174439528 -----TTT--T--------GGGGGG----- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1398574 18 + 91010382 -----TTT--Tgggggggtgggggg----- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204158599 17 + 204313951 TTGTTTTT--TGAA-----GGGAG------ i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2447502 30 - 202140232 I e mm10.chr13 74328802 539 + 120421639 I e canFam3.chr34 11946929 149 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=273.000000 s hg38.chr3_KI270937v1_alt 119312 1 + 165607 T s panTro4.chr3_GL389630_random 93139 1 - 103936 T i panTro4.chr3_GL389630_random C 0 C 0 s mm10.chr13 74329341 1 + 120421639 T i mm10.chr13 I 539 C 0 e ponAbe2.chr3 2447502 30 - 202140232 I e calJac3.chr2 204158616 0 + 204313951 C e canFam3.chr34 11946929 149 + 42124431 I e chlSab2.chr4 1398592 0 + 91010382 C e papAnu2.chr6 1274326 0 + 174439528 C e macFas5.chr6 1307889 0 + 181584905 C e rheMac3.chr6 180478116 1935 - 180491593 I e nomLeu3.chr11 2899403 0 - 123690457 C a score=142790.000000 s hg38.chr3_KI270937v1_alt 119313 59 + 165607 TGGGGGAGAAGTAGGGATGCTACAAGCATTTTTTCTTTCCTTTTCATTTTTAAAAATTA s panTro4.chr3_GL389630_random 93140 59 - 103936 TGGGGGAGAAGTAGGGATGCTACAAGCATTTTTTCTTTCCTTTTCATTTTTAAAAATTA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447532 53 - 202140232 TGGGGGAGAAGTAGTGATGCTACAAGCATTTTT------CTTTCCATTTTTAAAAATTA i ponAbe2.chr3 I 30 C 0 s nomLeu3.chr11 2899403 59 - 123690457 TGGGGGAGAAGTAGGGATGCTACAAGCATTTTTTCTTTCCTTTTCATTTTTAAAAATTA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307889 59 + 181584905 TGGGGGAGAAGTAGTGATGCTACAAGCATTTTTTCTTTCCTTTCCATTTTtaaaaatta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274326 59 + 174439528 TGGAGGAGAAGTAGTGATGCTAcaagcattttttctttcctttccatttttaaaaatta i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1398592 59 + 91010382 ggggggAGAAGTAGTGATGCTACAAGCATTTTTTCTTTCCTTTCCATTTTTAAAAATTA i chlSab2.chr4 C 0 I 323 s calJac3.chr2 204158616 59 + 204313951 TGGGGGAGAAGTAGTGATGCTACAAACCCTTTTTCTTTCTTTTCCATTTTTAAAAATTA i calJac3.chr2 C 0 C 0 s mm10.chr13 74329342 40 + 120421639 TGGGGGAAAA------ATATTACAAAT------------CTTTTCATTTTT-AAATTCA i mm10.chr13 C 0 C 0 e canFam3.chr34 11946929 149 + 42124431 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=128129.000000 s hg38.chr3_KI270937v1_alt 119372 110 + 165607 AAGCGTA---AAGATACAGTAAAAT----AAACT-------------CATCATTTTTAATGTAG-GTTTTTCAAACTTTGACACACACAGAGCTGTGTCTGTAAGCCTCAGCACAATCAGGAAAcagcctc s panTro4.chr3_GL389630_random 93199 110 - 103936 AAGCATA---AAGATACAGTAAAAT----AAACT-------------CATCATTTTTAATGTAG-GTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTAAGTCTCAGCACAATCAGGAAAcagcctc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447585 112 - 202140232 AAGCATA---AAGATACAGTAAAAT---AAAACT-------------CATCATTTTTAATGTAGCGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTAAGTCTCAGCACAATCAGGAAAcagcctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2899462 68 - 123690457 AA---------------------------------------------------------------GCTTTTCAAATTTTGACACACACAGAGCTGTGTCTCTAAGTCTCAGCACAATCAGGAAAcagcttc i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1307948 107 + 181584905 aagcata---aagatagagtaaaat----aaaCT-------------CATCATTTTTAGTATAGGGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTA----TTAGCACAATCAGGAAAcagcctc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274385 107 + 174439528 aagcata---aagATAGAGTAAAAT----AAACT-------------CACCATTTTTAGTATAGGGTTTTTCAAATTTTGACACACACAGAGCTGTGTCTGTA----TTAGCACAATCAGGAaacagcctc i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204158675 117 + 204313951 AAGCATAATTAAGATACAGTAAAAAAAAAAAACT-------------CGCCATTTTTAGTGTAGTATTTTTCAAATGCTGACACACACAGAGCTGTGTAT-TAACTATGAGCACAATCAGGAAAcagcctc i calJac3.chr2 C 0 C 0 s mm10.chr13 74329382 107 + 120421639 ------------AAGACAGTGAAAT----TTGTTGTCTTTTTGTTTACATTTTTTTTTTAGTAGAGCTTTTCAGGTTTTG--GCAAATAGAGTCATGTT--TAAGTAAAAcccccactag--cccagc--c i mm10.chr13 C 0 C 0 e canFam3.chr34 11946929 149 + 42124431 I e chlSab2.chr4 1398651 323 + 91010382 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=257307.000000 s hg38.chr3_KI270937v1_alt 119482 143 + 165607 tggcaaccaccaatcccttttcttccctaga-tgtgccttgtccagaatgtcctatcaacaggaccacaggcgtgcagccttttgagtccgact-ccACAGC--ATT--------------CTGCGT---GAGA-----------TGCTGCATGTGT-----GAG----------------------------------------------------CGGTTTCTCAGATGT s panTro4.chr3_GL389630_random 93309 143 - 103936 tggcaaccagcaatcccttttcttccctaga-tgtgccttttccagaatgtcgtatcaacaggatcacaggcgtgcagccttctgagtccgact-ccACAGC--ATT--------------CTGCGT---GAGA-----------TGCTGCATGTGT-----GAG----------------------------------------------------CGGTTTCTCAGATGT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447697 143 - 202140232 tggcaaccaccaatcccttttcttccctaga-tgtgccttttccagaatgtcctatcaacagaaccacaggtgtgcagccttttgagtctgact-ccACAGC--ATT--------------CTGCGT---GAGA-----------TGCTGCATGTGT-----GAG----------------------------------------------------CAGTTTCTCAGACGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2899530 139 - 123690457 tggcaaccaccaatcccttttcttccctaga-tgtgccttttccagaatgtcgtatcaacagaaccacaggtgtgcagccttttgagtctgact-ccACAGC--ATC--------------CTGCAT---GAGA-----------TGCTGCATGTGT-----GAG----------------------------------------------------CAGTTTCTCAG---- i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1308055 143 + 181584905 tggcaaccaccaatcccttttcttccctaga-tgtgccttttccagaatgttgtatcaagagagtcacaggtgtgcagtcttttgagtctgact-ccACAGC--ATT--------------CTGCGT---GAGA-----------TGCTGCATGTGT-----GAG----------------------------------------------------CGGTTTCTCAGATGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274492 143 + 174439528 tggcaaccaccaatcccttttcttccctaga-tgtgccttttccagaatgtcgtaTCAAGAGAGCCACAGGTGTGCAGCCTTTTGAGTCTGACT-CCACAGC--ATT--------------CTGCGT---GAGA-----------TGCTGCATGCGT-----GAG----------------------------------------------------TGGTTTCTCAGATGT i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204158792 142 + 204313951 tggcaacccctgacccctcttcttccctgga-tgtgccttttccagaatgctgtatcaacagagcctcaggtgtgcagcgttttgagtctgact-ccACAAC--ATT--------------CTGCGT---GAG------------TGCTGCATGCAT-----GAG----------------------------------------------------CGGTTTTTCAGATGT i calJac3.chr2 C 0 C 0 s mm10.chr13 74329489 148 + 120421639 tagcaaccatga--tctgtttctgccttacagcttgcaatttccagaat----------taaaaacaca--tgtgcagtcttttgagtctTACT-CTA-AAC--ATTTAGTCCTTTCATTGCTGAATTTAAAAA-----------TTCTTAATGTATTTGTAGAA----------------------------------------------------CCTTTGCCTATA--- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947078 207 + 42124431 tggcaaccactgagccagcttattcctcagt-tttgtctcttccataatgttatataaatag--tcagatatatgaaaccttttgagcctgattaatacaacttaat--------------atgtct---gagatccatttgtgctgttgcacgaac-----aaggaatttgttccttttatttttgagtCAAAAAAAAATTTTTTAAAGTATGCATTGATCTTTCAGATAT i canFam3.chr34 I 149 C 0 e chlSab2.chr4 1398651 323 + 91010382 I e rheMac3.chr6 180478116 1935 - 180491593 I a score=223287.000000 s hg38.chr3_KI270937v1_alt 119625 79 + 165607 -CAAGTATAGGGTATTCTCACAAAATGTTC-TTTTCTGCATTTTCAAAGAAAGAGAAGCTCAAAATTTCTACACTGCTCTG s panTro4.chr3_GL389630_random 93452 79 - 103936 -CAAGTATAGGGTATTCTCACAAAATGTTC-TTTTCTGCATTTTCAAAGAAAGAGAAGCTCAAAATTTCTACACTGCTCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2447840 79 - 202140232 -AAAGTATAGGGTATTCTTACAAAATGTTC-TTTTCTGCATTTTCAAAGAAAGAGAAGCTCAAAATTTCTACATTGCTCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2899669 78 - 123690457 --AAGTATAGGGTATTCTTACAAAATGTTC-TTTTCTGCATTTTCAAAGAAAGAGAAGCTCAAAATTTCTACATTGCTCTG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180480051 80 - 180491593 -cAAGTATTGGGTATTCTTACAAAATGTTCTTTTTTTACATTTTCAGAGAAAAAGAAGCTCAAAATTTCTACATTGCTCTG i rheMac3.chr6 I 1935 C 0 s macFas5.chr6 1308198 79 + 181584905 -AAAGTATAGGGTATTCTTACAAAATGTTC-TTTTTTGCATTTTCAAAGAAAGAGAAGCTCAAAATTTCTACATTGCTCTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274635 80 + 174439528 -AAAGTATAGGGTATTCttacaaaatgttctttttttgcattttcagagaaaaagaagctCAAAATTTCTACATTGCTCTG i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204158934 79 + 204313951 -AAAGTATGGGATATTCTTATAAAATGTTC-TTTTTTGCATTTTCAAAGAAAGAGAAGCTCAAACTTTCTATATTGCTGGG i calJac3.chr2 C 0 C 0 s mm10.chr13 74329637 73 + 120421639 -AAAGTATAATCTATTCTTTTAAAACAA---TTTTTCTCATTCTCAAAGCAGGGAA---TCTGAGTCTCCACTTTGCTCT- i mm10.chr13 C 0 C 0 s canFam3.chr34 11947285 80 + 42124431 TAAATTATAAGATATTCTTATAAAACTTGC-TTTTTCTCATTTCCAAAAAAAGGGAACTTTGAATTTTCTGCTTTGCCCTG i canFam3.chr34 C 0 C 0 e chlSab2.chr4 1398651 323 + 91010382 I a score=1384103.000000 s hg38.chr3_KI270937v1_alt 119704 522 + 165607 AGAGAAGTGGTATCAGACCTCACTGCGACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGGAGCGAGGCACCTGAACTCCGCCTTCGCCGATGATCAGCAACGGCTGGGGATG--AGACGCCGGCTCTGCATGTGCTGGCCTCCTGAGCTGTCGTCAGATCCACAGAGACACAGTGTCTGAAGT---AGCTACCCTTT---TAAT-ACTGCCTGTACCTTTCTAACTACAGATAGAAAAGGGT------CATGTT--------------TATAA--GGTACGGCGGTGCTAGTTTTTA---TTTCACTTGAGTCCATAC------AAAAAGCAAAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTAAACAGTTAACACCAGAGAAAGCTAACGGGAAGAACGTGGGCCTGGGGTCCCACCATCCTTGCCACGCAAACATCCACCAGTGCCTCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGCATGACCACCGTGAGGA-TCTCTGGAGG-TGGGAACGATGCTAACTGTCCTGTTCTT s panTro4.chr3_GL389630_random 93531 522 - 103936 ATAGAAGTGGTATCAGACCTCACTGCT-CAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGGAATGATGCACCTGAACTCCGCCTTCGCCGATGATCAGCAACGGCTTGGGATG--AGACGCCAGCTCTGCATGTGCTGGCCTCCTGAGCTGTCGTCAGATCCACAGAGACAGAGTGTCTGAAGT---AGCTACCCTTT---TAAT-ACTACCTGTACCTTTCTAACTACAGATATAAAAGGGTG-----CATGTT--------------TATAA--GGTTCGGCAGTGCTAGTTTTTA---TTTCACTTGAGTCCATAC------AAAAAGCAAAAAGCGCCTGTTCTATAAAAACAGCAGAAATGATGCTAAACAGTTAACACCAGAGAAAGGTAACGGGAAGAACGTGGGCCTGGGGTCCCACCATCCTTGCCACGCAAACATCCACCAGTGCCTCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGCATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCTGCTCTT i panTro4.chr3_GL389630_random C 0 I 217 s ponAbe2.chr3 2447919 523 - 202140232 AGAGAAGTGGTATCGGTCCTCACTGCTACAAAGTACAGGGCTATGGAATGAGACAAGCAC-ACCTGTGGCGTCAGGAACGATGGACCTGAACTCCGCCTTCGCCGATGATCAGCAACAGCTTGGGATA--AGACACCAGCTCTGCGTGTGCTGGCCTCCGGAGCTGTGGTCAGATCCACAGAGACACAGTGTCTGAAAT--AAGCTACCCTTT---TAAT-ACTATCTGTACCTTTCTAACTACAGATATAAAAGGGCG-----CATGTT--------------TATAA--GTTACAGCAGTGCTAGTTTTTC---TTTCACTTGAGTCCATAC------AAAAAGCAAAAAGCACCTGTTCTATAAAAACGGCAGAAATGATGCTAAACAGTTAACACCAGAGAAAGGTAACGGGAAGAACGTGGGCCTGGGGTCCCACCATCCTTGCCACACAAACATCCACCAGTGCCTCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGGATAACCACCGTGAAGC-TCTCTGGAGG-TGGGAGTGATGCTAACTGTCCTGTTCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2899747 530 - 123690457 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAATGAGACAAGCACAACCTGTGGCGTCAAGAACGACGGACCTGAACTCCGCCTCCACCCATGATCAGCAATGGCTTGGGATA--AGACGCCAGCTCTGCGTGTGCTGGCCTCCTGGGCTGTGGTCAGATCCACAGAGACAGAGTGTCTGAAGT--AAGCTACCCTTT---TAGT-ACTATCTGTACCTTTCTAACTACAGATATAAAAGGGCG-----CATGTT--------------TATAA--GTTATGGCAGTGCTAGTTTTTA---TTTCACTTTTATTTGCTCTTTTCAACAGAGCAAAAAGCACCTGTTCTATAAAAACAGCAGAAATCATGCTAAACAGTTAACACCAGAGAAACGTAACGGGAAGAACGTGGGCCTGGGGTCCCACCATCCTTGCCACACAAACATCCACCAGTGCCTCATC---------CACCT--CATACTG---TTCTGAGCACAGGAGGCTGGATAACCACCGTGAACA-TCTCTGGAGG-TGGGAGTGATGCTAACTGTCCTGTTCTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180480131 515 - 180491593 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGGAGCGATGGACCTGAACTCCGCCTTCGCCCATGGTCAGCAGTGACTTGGGGTA--AGACGCCAGCTCTGCGTGTGCTGGCCTCCCGAGCTGTGGTCAGATC--CAGAGACAGAGTGTCTGAAGT--AAGCTACCTTTT---TAAT-ACTCTCCGTACCTTTCTAACTACAGATATAAAAGCGGG-----CATGTT--------------TATAA--GTTACAGCAGTCCTAGTTTTTA---TTTCACTTGAATCCACAC-------------AAAAAGCACCTGTTCTATTAAAACAGCAGAAATGATGCCAAACAGTTAACACCAGAGAAAGGTAACGGGAAGAATGTGGGCCTGGGGTCCCACCATTCTTGCCACACAAACATCCACCGGTGTTTCATC---------CACCT--CACACTG---TTCTGAGCACATGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGAGAGTGATGCTAATTGTCCTGTTCTT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1308277 514 + 181584905 AAAGAAGTGGTATCAGTCCCCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCATCAGGAACGATGGACCTGAACTCCGCCTTCGTCCATGATCAGCAGCGACTTGGGGTA--AGACTCCAGCTCTGCATGTGCTGGCCTCCCGAGCTGTGGTCAGATC--CAGAGACAGAGTGGCTGAAGT--AAGCTACCCTTT---TAGT-ACTCTCTGTA-TTTTCTAACTACAGATATAAAAGGGGG-----CATGTT--------------TATAA--GTTACGGCAGTCCTAGCTTTTA---TTTCACTTGAATCCATAC-------------AAAAACCACCTGTTCTATAAACACAGCAGAAATGATGCCAAACAGTTAACATGAGAGAAAGGTAACGGGAAGAATGTGGGCCTGGGGTCCCACCATCCTTGCCACACAAACATCCACCGGTGCCCCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGGATAACTACCGTGAAGA-TCTCTGGAGG-TGAGAGTGATGCTAATTGTCCTGTTCTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1274715 517 + 174439528 AGAGAAGTGGTATCAGTCCTCACTGCTACAAAGTGCAGGGCTATGGAGTGAGACAAGCACAACCTGTGGCGTCAGGAGCGATGGACCTGAACTCCGCCTTCGCCCATGGTCAGCAGCGACTTGGGGTAAGAGACGCTAGCTCTGCGTGTGCTGCCCTCCCGAGCTGTGGTCAGATC--CAGAGACAGAGTGGCTGAAGT--AAGCTACCCTTT---TAGT-ACTCTCTGTCATTTTCTAACTACAGATATAAAAGGGGG-----CATGTT--------------TATAA--GTTACGGCAGTCctagttttta---tttcacttgaatCCACAC-------------AAAAAGCACCTGTTCTATTAAAACAGCAGAAAGGATGCCAAACAGTTAACACCAGAGAAAGGTAACGGGAAGAATGTGGGCCTGGGGTCCCACCATCCTTGCCACACAAACATCCACCGGTGCCCCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCCGTTCTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1398974 515 + 91010382 AGAGAAGTGGTGTCAGTCCTCACTGCTACAAAGTGCAGGGCTGTGGAGTGAGACAAGCACACCCTGTGGCGTCAGGAGCGATGGACCTGAACTCCGCCTTCGCCCAGGATCAGCAGCGACTTGGGGTA--AGACTCCAGCTCTGCATGTGCTGGCCTCCCGAGCTGTGGTCAGATC--CAGAGACAGAGTGGCTGAAGT--AAGCTACCCTTT---TAGT-ACTCTCTGTAATTTTCTAACTACAGATATAAAAGGGGG-----CATGTT--------------TATAA--GTTACGGCAGTCCTAGTTTTTA---TTTCACTTGAATCCACAC-------------AAAAACCACCTGTTCTATAAACACAGCAGAAATGATGCCAAACAGTTAACACCAGAGAAAGGTAACGGGAAGAATGTGGGCCTGGGGTCCCACCATCCTTGCCACACAAACATCCACCGGTGCTTCATC---------CACCT--CACACTG---TTCTGAGCACACGAGGCTGGATAACCACCGTGAAGA-TCTCTGGAGG-TGGGAGCGATGCTAACTGTCCCATTCTT i chlSab2.chr4 I 323 C 0 s calJac3.chr2 204159013 421 + 204313951 AGAGAAGTGGTATCAGTCCTCACTGCTGCAaagtgcagggctatggagtgagacaaacactacctgtggcgtcaggaaggatggacctgaactctgcctttgccaatgatcagcaacgacctgggaca--agacgccacctctgcacgtgccagcctcctgagctgtGGTCAAATCCACAGAGACTGAGTGTGTGAAATGTAAGCTACCCTTT---TAAT-ACTACCTGTACCTTTTTAACCACAGATACAAAAGGGGGC---ACATGTT--------------TGTAA--GTTACGACAGTGCTCGTTTTTA---CTTTGCTTGAATCCATAC-------------AAACAGCACCAGTTCT---------------------------------------------------------------------------------------------------ACCAGTGCCTCCTC---------CACCT--CACAGTG---TTCTGAGGAAACGAGGCTGGATGACCACCATGAAGA-TCTCT-GAAG-TGGGAGCGAGGCTAAGTGTCCAGTTTTT i calJac3.chr2 C 0 C 0 s mm10.chr13 74329710 431 + 120421639 --AGATGAGCTTTTGACCCTC-------------------------------CCAAAGGCTACATTTGGTGTCGGAGAAGAT-CCTTTGAGCCCTGCTTATGCAACTGGACAGCA----CTAAGGACC--AGGAACTGTCTTCACAT---TTAGACT--TGTGCTATGGTATGACTAGGAGTGTGAAGATATGTAAAAT--ATGTAA----------AATGATTACCCAAACCTTTCTCTTTAC--------------------CA-------------------GTGA--GGCAAGGATGTGCTGGTCTCTGCACCATCACTACTGTTCATCC-------------AGAACGCACCCGCTCTATATCAACTACAACTGACATCC---ACAAGTAACA--GAGGAAAGAAAAATGGATGGAACAGGGAGAGGGATC---------------------------TCTATGCCTCCTCATGAGGTATTATTT--CATACTGCTATTCTAAGAAAAC-AGACAAAACAGCTACCATGAAGGCTCCTTAGAGG-CTGGCGCTCTAGTAACCTCCTGGTTCTG i mm10.chr13 C 0 I 3 s canFam3.chr34 11947365 481 + 42124431 --GGATTTTATTTCAGGCTTCACCATtac-----------------agtgagacaagcactagattgggggtcagaccaggtggttttgactcctgcctttg--------cAGCAAAAA-TGGGCACA--GGGCCCTACCTCTGCCTTT--TAGCCT--GGACTTGCAGTCAGAGC--AAGAGAGAAGGTGTTTGAAAACATAACTGTCCATTTCGTTAT-ATTATCTG-------CTAACTGCAGATATAAAGGGGAGTGCAGCTTGTTATACTGAGGGCTAATATAACTAGTAGGACAGTAAGAG---TTA-----------AAATCCATA--------------AAAAAACTTTTGTTTGATAAAAACAGAACAACTGAGACTAAACAGTTACCACCAGTGAAGCATAACGGGAAGAGAGGGGCCCAGGGATCCCACAACCCTCCCTTGGGGAACA-------GTGTCTT------------CACCTAACATGTCG---TCGTGAACGAATGGGCCAACGTAACCCACATGAAGACCCTCTGGAAGCTCATAGCAACAGTAAGCGTCCCATT--- i canFam3.chr34 C 0 C 0 a score=673313.000000 s hg38.chr3_KI270937v1_alt 120226 223 + 165607 CGTGCACATAAGACTCACACTCCCA-CACACGGTAT-TCCTTTTCCTGCACATTATTTGACGCTATCCTGAAAAGAAAACCAGCAAGTGAAATCGAATCTGTCCGTAGAGGGTGGG---------AATCCTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGTTGTA-----CTTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG s panTro4.chr3_GL389630_random 94270 228 - 103936 CGTGCACGTAAGACTCACACTCCCA-CACACGGTAT-TTCTTTTCCCGCACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATTGAATCTGTCCGTAGAGGGTGGG---------AATCCTGTTCCCTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGCTACAGTTTGTTTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i panTro4.chr3_GL389630_random I 217 C 0 s ponAbe2.chr3 2448442 228 - 202140232 AGTGCACATAAGACTCACACTCCCA-CACACGGTAT-TTCTTTTCCTGCACATTGTTTGACGCTACCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGGGTGGG---------AATCCTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGTTGTACTTTGTTTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900277 228 - 123690457 AGTGCACGTAAGACTCACACTCCCA-CACGTGGTAT-TTCTTTTCCTGCACGTTATTTGACACTGTCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGGGTGGG---------AATCCTGTTCACTCTAAGTCAGCCCTTCTCCTCTAATAGAGGTTAGTTGTACTTTGTTTTTAGAATGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180480646 224 - 180491593 AGTGCACATGAGACTCACACTCCCA-CACATGGTAT-TTCTTCTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGAGTGGG---------AATTCTGTTCACTGTAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGTTTTTAGAATGGCCTAAATTATTTTTC--TAAGTA-C---ATGTTACA-----------------------------------------TATTCATTCACA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1308791 225 + 181584905 AGTGCACATGAGACTCACACTCCCA-CACATGGTAT-TTCTTCTCCTACACATTATTTGATGCTATCATGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGAGTGAG---------AATCCTGTTCACTCTAAGTCATCCTTTCTCCTCTAATAGAGGCTAGCTGTACTTTGTTTTTAGAATGGCCTAAATTATTTTTC--TAAGTACC---AAGTTACG-----------------------------------------TATTTGTTCATG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1275232 225 + 174439528 AGTGCACATGAGACTCACACTCCCA-CACGTGGTAT-TTCTTCTCCTACACATTATTTGATGCTATCACGAAAAGAAAACCAGCAAGTGAAATCCAATCTGTCCGTAGAGAGTGGG---------AATTCTGTTCACTGTAAGTCATCCTTTCTCCTCTAATAGAGGCTAGCTGTACTTTGTTTTTAGAATggcctaaattatttttc--taagtacC---AAGTTACA-----------------------------------------CATTTGTTCATg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1399489 214 + 91010382 AGTGCACATGAGACTCACACTCCCA-CACACGGTAT-TTCTTCTCCTACACATTATTTGACGCTATCATGAAAAGAAAACCAGCAAGTGAAACCCAA--TGTCCGT--AGAGTGGG---------AATCCTGTTCACTGTAAGTCATCCCTTCTCCTCTAATAGAGGCTAGCTGTACTTTGTTTTTAGAATGGCCTAAATTATTTTTC---------C---ATGTTACA-----------------------------------------TATTCATTCACA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204159434 224 + 204313951 AGTGCACGTAAGACCCACACTGCAG-CACATGGTAT-TTCTTCTCCTGCACACTACTCTGTGCTATCATGAAAAGAAAACCACCAAGTGAAATCCA--CTGTCACCGGAGGG-GAG---------AATCCGGTTCGCTTTAAGTCATCCCTTCTCTTCTAAT-GAGATTAGTTGCACTTTGTTTTTAGAAGGGCCTAAATTATTTTTC--TAAGTACCAAGAAGTTACA-----------------------------------------TATTCATTCATG i calJac3.chr2 C 0 C 0 s mm10.chr13 74330144 201 + 120421639 TGTACAAACAAAACT-ACACTCCAA-CACAAGGTACATTTTTCTTTTACA----GTTTTAAGCTACCAT---AAGAAAACC-TCAACTGAAATTCTTTCTATCCCTGTGGGGTAGG---------A------------CTATGTCA----TTCTTTTATAAATGGAATT--CTAAATCTTGTTTTTAAAACAGTCTAAAATTTTTCTA--CAATTACCAAGAAGTTACA-----------------------------------------GATTCATTTTT- i mm10.chr13 I 3 C 0 s canFam3.chr34 11947846 270 + 42124431 --TACAGA-AGGATTCACACTTCCAGCACAGAGTGT-TTTTTCCTCAGCAAATTATTTTAAGTTGCCAGAAGAACAGAATCACAGACTGAAATCCACTGTATCACGGAAGGGAGGGCTATGACCCAATGCTCTGTTTTGTGTGCATTATGTTCTCCTTTAACAGA--TTATTTATATT---TTTTAAGAA---CCTAAATTACTTTTCCATAAATATTGAGAACTTATATATATTCACACCTACTTTTTTtttttttttaagattttatttatttattcatg i canFam3.chr34 C 0 I 147 a score=328004.000000 s hg38.chr3_KI270937v1_alt 120449 89 + 165607 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATACGTAATGAACTTCCCCTAAAAATAACAGCTTCCT s panTro4.chr3_GL389630_random 94498 88 - 103936 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATC-GGCAAGTAATACATAATGAACTTCCCCTAAAAATAACAGCTTCCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2448670 89 - 202140232 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATAGGTAACGAACTTCCCCTAAAAATAACAACTTCCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900505 89 - 123690457 CCAACTATTTTAAATATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAAATTCCCCTACAAATAACAACTTCCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180480870 89 - 180491593 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTCCCCTAAAAATAACAACTTCCT i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1309016 89 + 181584905 ACAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATTTAATGAACTTCCCCTAAAAATAACAACTTCCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1275457 89 + 174439528 acaactatttaaaaaatttcattgcaaataagttatttttatcaGGCAAGTAATATGTAATGAACTTCCCCTAAAAATAACAACTTCCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1399703 89 + 91010382 CCAACTATTTAAAAAATTTCATTGCAAATAAGTGATTTTTATCAGGCAAGTAATATGTAATGAACTTCCCCTAAAAATAACAACTTCCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204159658 89 + 204313951 CCAACTACTTAAAATATTTCATTGCAAACAAGTGCTTTTTATCAAGCAAGTAACATGTAATGAACTTCCCCTAAAAATAGCAATTTCCT i calJac3.chr2 C 0 C 0 s mm10.chr13 74330345 81 + 120421639 ---ACTATT---AATATTGGACTGCAAACA--TAATTTATAACAGACAAATAATATGTAATCAACTTTCCCTCAAAATACCAATTTCTt i mm10.chr13 C 0 I 813 s canFam3.chr34 11948263 84 + 42124431 CCTACTCTTTAAAATATTTCATAGCAAGTAAATAATTTATACTGAGCAAGCACTGTGTGATAAACTTCTCCTCAAAACAA----TTCC- i canFam3.chr34 I 147 C 0 a score=12609.000000 s hg38.chr3_KI270937v1_alt 120538 4 + 165607 AATA s panTro4.chr3_GL389630_random 94586 4 - 103936 AATA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2448759 4 - 202140232 AATA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900594 4 - 123690457 AATA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180480959 4 - 180491593 AATA i rheMac3.chr6 C 0 I 317 s macFas5.chr6 1309105 4 + 181584905 ATTA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1275546 4 + 174439528 AATA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1399792 4 + 91010382 AATA i chlSab2.chr4 C 0 I 313 s calJac3.chr2 204159747 4 + 204313951 AATA i calJac3.chr2 C 0 C 0 s canFam3.chr34 11948347 4 + 42124431 CATA i canFam3.chr34 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I a score=499422.000000 s hg38.chr3_KI270937v1_alt 120542 160 + 165607 GTGCTTTTTCTAAACAGAAAATAATGACTGCAAAATAAT--TTAAAAAAAAAAAATGTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT s panTro4.chr3_GL389630_random 94590 160 - 103936 GTGCTTTTTCTAAGCAGAAAATAATGACTGCAAAATAAT--TAAAAAAACAAAAATGTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2448763 154 - 202140232 GTGCTTTTTCGAAGCAGAA---AATGACTGCAAAATAAT--TTTAAAAAAAAA---GTAACCTCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900598 159 - 123690457 GTGCTTTTTCTAAGCAGAAAATAATGACCGCAAAATAAT--TAAAAAAAAAAAAA-GTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATGGCCACCATATAATCTCTGGATTTCTCAGTTTAATCACTTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180481280 159 - 180491593 GTGCTTTTTCTAAGCAGAACATAATGACTACaaaataat--taaaaaaaaaaaat-GTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i rheMac3.chr6 I 317 C 0 s macFas5.chr6 1309109 159 + 181584905 GTGCGTTTTCTAAGCAGAACATAATGACTACAAAATAAT--TAAAAAAAAAAAAA-GTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1275550 158 + 174439528 GTGCTTTTTCTAAGCAGAACATAATgactacaaaataat--ttaaaaaaaaaaa--gtaaccccaAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400109 158 + 91010382 GTGCTTTTTCTAAGCAGAACATAATGACTACAAAATAAT--TTAAAAAAAAAAA--GTAACCCCAAAAATGTCACCTTAACTGTTAAGATCCCCAACCAGCCTCTATCTAGTCTCAACATTACCACCATATAACCTCCGGATTTCTCAGTTTAATCACTTCT i chlSab2.chr4 I 313 C 0 s calJac3.chr2 204159751 157 + 204313951 GTGCTTTTTCTAAGCAGAACATAATGACTGCAAAATAAT--TTTTTTAAAAAT---GTAACCCCAAAAATGTCACCTTAATAGTTAAGATCCCCAACCAGCCTCTATCTGGTGTCAACATTACCACCAGACAATCTCTAGATTTCTCAGTATCATCACTTCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11948351 147 + 42124431 GTGACTTTTCTAAGGAGAACATAATAACTGCAAAACAATACCTGACCAAAACTAG-GTTACCCT-------CTACATAAACTGTTAGGACCCACACCTAGCCTGTGTCGAGTCCCAAGTCTATTACTGTAGAA-------ATCTCTTTCTTTTCTCTCTCtt i canFam3.chr34 C 0 I 188 e mm10.chr13 74330426 813 + 120421639 I a score=329933.000000 s hg38.chr3_KI270937v1_alt 120702 107 + 165607 AGGGGAAAAAACCCAGACTACCTCTATATGCTCACTACGCAAATTTCCAGTAAGAAATCAAGGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatccca s panTro4.chr3_GL389630_random 94750 107 - 103936 AGGGGAAAAAACCCAGACTACCTCTATATGCTCACTAAGCAAATTTCCAGTAAGAAATCAAGGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatccca i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2448917 107 - 202140232 AGGGGAAAAAACCCAGACTACCTCTATATGATCACTAAACAAATTTCCAGCAACAAATCAAGGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatccca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900757 106 - 123690457 -GGGGAAAAAACCCAGACTACCTCTATATGATCACTAAGCCAATTTCCAGTAACAAATCAAGGCTTTGTAACCTggctgggtgcagtggctcatgcctgtaatccca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr6 180481439 107 - 180491593 AGGGGAAAAAACCCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGAGGCTTTGTAACCTggctgggtgccgtggctcacacctgtaatccca i rheMac3.chr6 C 0 I 9651 s macFas5.chr6 1309268 107 + 181584905 AGGGGAAAAAACCCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGAGGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatccca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1275708 107 + 174439528 AGGGGAAAAAACCCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGAGGCTTTGTAAcctggctgggtgccgtggctcatgtctgtaatccca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400267 107 + 91010382 AGGGGAAAAAACCCAGACTACCTCTATATGACCACTAAGCAAATTTCCAGTAACAAATCGAGGCTTTGTAACCTggctgggtgccgtggctcatgtctgtaatccca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204159908 107 + 204313951 AGGGGAAAAAACCCAGACGACCACTATATGATCACTAAGCAAATTTCCAGGAAGAAATCAAGGCTTTGTAACCTggctgggggtgggggctcatgcctgtaatccca i calJac3.chr2 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I a score=207918.000000 s hg38.chr3_KI270937v1_alt 120809 92 + 165607 atactttggaaagctgaggcagaa-gactgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctaccaaaaaa s panTro4.chr3_GL389630_random 94857 92 - 103936 atactttgggaagctgaggcagaa-gactgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctaccaaaaaa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449024 93 - 202140232 gtactttgggaagctgaggcagaaggactgtttgagtctaggagtttaagaccagcctgggcaatattgtgagaccctgtgtctacaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2900863 93 - 123690457 atagtttgggaagctgaggcagaaggactgtttgagtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctacaaaaaaa i nomLeu3.chr11 C 0 I 4012 s macFas5.chr6 1309375 91 + 181584905 gtactttgggaagctgaggcagaaggactgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtttctac--aaaaa i macFas5.chr6 C 0 I 3 s papAnu2.chr6 1275815 93 + 174439528 gtactttgggaagctgaggcagaaggactgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctacaaaaaaa i papAnu2.chr6 C 0 I 3 s chlSab2.chr4 1400374 93 + 91010382 gtactttgggaagctgaggcagaaggactgcttgggtctaggagttcaagaccagcctgggcaatattgtgagaccctgtctctaacaaaaaa i chlSab2.chr4 C 0 I 3 s calJac3.chr2 204160015 92 + 204313951 acactctgggaagctgagagagaaggactgtttcagtctaggagttccagatcagcctgggcaacattgtgagaccctgtctctgcaaaaaa- i calJac3.chr2 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I e rheMac3.chr6 180481546 9651 - 180491593 I a score=208011.000000 s hg38.chr3_KI270937v1_alt 120901 125 + 165607 aatttttttaaattagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgttgaggactgcttgagctcgggaggttgaggctgctatgactgtgccact s panTro4.chr3_GL389630_random 94949 125 - 103936 attttttttaaattagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgaaggttgaggtgttgaggactgcttgagctcgggaggttgaggctgctatgactgtgccact i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449117 124 - 202140232 aattttttt-aattagccaggtatggtggtgcacatctgtagtctcagctacttgggactctgaaggttgaggtgttgaggactgcttgagttcgggaggttgaggctatgatgactgtgccact i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1309469 125 + 181584905 tttttttttaaattagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgcaggtggaggtgttgaggactgctcgagcccgggaggttgaggcggctatgactgtgccatg i macFas5.chr6 I 3 C 0 s papAnu2.chr6 1275911 125 + 174439528 aatttttttaaattagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctGCAGGTGGAGGTGTTGAGGACTGCtcgagcccgggaggttgaggcagctaTGActatgccacg i papAnu2.chr6 I 3 C 0 s chlSab2.chr4 1400470 125 + 91010382 aatttttttaaattagccaggtgtggtggtgcacatctgtagtcccagctacttgggactctgtaggtggaggtgttgaggactgctcgagcctgggaggttgaggcggctatgactgtgccacg i chlSab2.chr4 I 3 C 0 s calJac3.chr2 204160107 125 + 204313951 aaaaataaaaaagtagccaggtgtgggggtgcacacctgtagttccagctacttgggactctgaaggttggggtgttaaggactgcttgagcccaggaggctgaggctgccatgactgtgccact i calJac3.chr2 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I e rheMac3.chr6 180481546 9651 - 180491593 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=44842.000000 s hg38.chr3_KI270937v1_alt 121026 17 + 165607 gcactccagcctgggct s panTro4.chr3_GL389630_random 95074 17 - 103936 gcactccagcctgggct i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449241 17 - 202140232 gcactccagcctgggct i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180491197 17 - 180491593 GCACTCCAGCCTGGGCT i rheMac3.chr6 I 9651 C 0 s macFas5.chr6 1309594 17 + 181584905 gcactccagcctgggct i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276036 17 + 174439528 gcactccagcctggtct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400595 17 + 91010382 gcactccagcctgggct i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160232 17 + 204313951 gcactccagcctgggct i calJac3.chr2 C 0 C 0 e mm10.chr13 74330426 813 + 120421639 I e canFam3.chr34 11948498 188 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=17755.000000 s hg38.chr3_KI270937v1_alt 121043 17 + 165607 gaccctgtctc-aaaaaa-- s panTro4.chr3_GL389630_random 95091 17 - 103936 gaccctgtctc-aaaaaa-- i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449258 16 - 202140232 gaccctgtctc--aaaaa-- i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180491214 15 - 180491593 GA-CCTGTCTC--AAAAA-- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1309611 15 + 181584905 ga-cctgtctc--aaaaa-- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276053 15 + 174439528 ga-cctgtctc--aaaaa-- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400612 15 + 91010382 ga-cctgtctc--aaaaa-- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160249 18 + 204313951 gaccctgtctcaaaaaaa-- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11948686 17 + 42124431 --GGCAATTTC-CAATTACA i canFam3.chr34 I 188 C 0 e mm10.chr13 74330426 813 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1033272.000000 s hg38.chr3_KI270937v1_alt 121060 334 + 165607 aaagaaaaaagaC------------TAACCTCCTGCGCCTTCTCAAATAGTCTGGGTCCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGCGAGTTTGCCCCGAGGCGGTTGACACCATGTGCAGAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCTGGGCACAATCTGATCCTGGCCATTCCCGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGATGCCCATTCCTCCACAAGCCCACCTCCCTCAACAGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG s panTro4.chr3_GL389630_random 95108 334 - 103936 aaagaaaaaaGAC------------TAACCTCCTGTGCCTTCTCAAATAGTCTGGGTCCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTGCGATGCTCAGGGCACATGCCTGACC--AGACAACCAGGTCCAACAGCGAGTTTGCCCCGAGGCGGTTGACACCATGTGCCAAGGCACAGGCGGCCTCCCCACAGGCGTACAGGCCGGGCACAATCTGATCCTGGCCATTCCCGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGATGCCCATTCCTCCACAAGCCCACCTCCCTCAACAGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449274 336 - 202140232 aaagaaaaaaGAC----------TGTAACCTCCTGCGCCTTCTCAAATAGTCTGGCTCCT-GAAGAAAACACTTACTAGATCTGCATGACTCTTCGATACTCAGGGTGCATGCCTGACC--AGACAACCAGGTCCAACAGTGAGTTTGCCCCGAGGCGGTTGGCACCATGTACCGAGGCACAGGCAGCCTCCCCACAGGTGTACAGGCCGGGCACAATCTGATCCTGGCCATTCGCGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGATGAAATGTCAAGGTGCCTATTCCTCCACAAGCCCACCTCCCTCAACGGGGTGTCTGTGCTGCAGGTCAGAGAA--AGAGAG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180491229 338 - 180491593 AAGGAAAAACGAC----------TGTAACCTCCTGCGCCTTCTCGAACAGTCTGGCTCCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACGACCAGGTCCAAGAGGGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTCACGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAACAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAAAG i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1309626 338 + 181584905 aaggaaaaaCGAC----------TGTAACCTCCTGCGCCTTCTCAGACAGTCTGGCTCCT-GAAGAAAACACTTACCAGGCCTGCACGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACGACCAGGTCCAAGAGGGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCGGGCACAATCTGATCCTGGCCATTCACGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAGCAGGGTGTCTGTGCTGCAGACCAGAGAA--AGAGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276068 338 + 174439528 aagtaaaaacgaC----------TGTAACCTCCTGAGCCTTCTCGAACAGTCTGGCTCCT-GAAGAAAACACTTACCAGGCCTGCATGACTCTTCAATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTACAGCCCAGGCACAATCTGATCCTGGCCATTCACGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAACAGGGTGTCTGTGCTGCAGaccagagaa--agagag i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400627 340 + 91010382 aaggaaaaacaaC----------TGTAACCTCCTGCGCCTTCTCAGACAGTCTGGCTCCT-GAAGGAAACACTTACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACATGCCCGACCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGCCGGTTGGCACCATGTACCGAGGCACAGGCGGCCTCCCCACAGGCGTATAGCCCGGGCACAATCTGATCCTGGCCATTCACGTGCCTCAGGACCTGTGGAAAGGAAGATTTCAGGTGAAATGTCAAGGTGCCCATACCTCCACCAGCCCACCTCCCCCAACAGGGTGTCTGTGCTGCAGACCAGAGAAAGAGAGAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160267 342 + 204313951 aagaaaaaaagaCTTCATAACTTTGTAACCTCCT--GCCTTCTCAAATGGTCTGGCTTCT-GAAGAAAACACTCACCAGGCCTGCATGACTCTTCGATGCTCAGGGCACAGGCCCGGCCAAAGACAACCAGGTCCAAGAGCGAGTTTGCCCCGAGACGGTTGGCACCATGGACTGAGGCGCAGGCGGCCTCCCCACAGGCGTACAGGCCAGGCACGATCTGATCCTGGCCATTCACGTGCCTCAGGACCTGTGGAA---AAGATTTCAGGTGAAG-GTCAAGGTGCCCATGCCTCCACAAGCCCACCTCCCCCAACAGGGTATCTGTGCTGCAGGTCAGAGAA--AGAGAG i calJac3.chr2 C 0 C 0 s mm10.chr13 74331239 327 + 120421639 AACAAATAAAGAC----------TATGCA-------GGCTCCTAGAATGGCTTGAGAGCTGGAAGAGAACACATACCAGGCCTGCAAGATTCTGCAATGCTCAGGGCACAGGCTCTGCCAAAGACTACAAGGTCCAAGAGAGAATTTGCTCCAAGCCGGTTGGCACCATGCACTGAGGCGCAGGCAGCCTCCCCACAGGCATACAGACCAGGCACAATCTGATCCTGGCCATTCACATGCTTCAGCACCTGT----AGGAATATTTCAGATGAAGCAACAAAATACCTATGCGTCCATATGCCTGCTTCCCT-GGCAGACTTCCTATGCCTGAAGTAGCAAAA--GTAAAG i mm10.chr13 I 813 I 35 s canFam3.chr34 11948703 320 + 42124431 ----AATCAAGAC--------ATGGTAACCTCTC--ACCTCCTGAAATAGCCTGGCTACTTGAAGAAAACACATACCAGGTCTGCAGGACTCTGCGATACTCAGGGCACATGCCCGGCCAAAGACGACCAAGTCCAAGAGCGAGTTGGCTCCGAGGCGGTTGGCACCGTGCACCGAGGCGCAGGCGGCCTCCCCGCATGCATACAGGCCAGGCACAATCTGATCCTGGCCATTCACGTGCCTCAGAACCTGTAGG-AGGAAGA------GTGAAGACTTTAGGAGCACA-GTTTGTACCCGTCTGCTTCCCAGCAGGGGATGTCTGCATGCAGGGGCAGAGA--------- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=24994.000000 s hg38.chr3_KI270937v1_alt 121394 9 + 165607 GGAAGTAgg s panTro4.chr3_GL389630_random 95442 9 - 103936 GGAAGTAGg i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449610 9 - 202140232 GGAAGTAgg i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180491567 9 - 180491593 GGAAGTAGG i rheMac3.chr6 C 0 T 9544 s macFas5.chr6 1309964 9 + 181584905 GGAAGTAgg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276406 9 + 174439528 ggaagtagg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400967 9 + 91010382 AGAGGTAgg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160609 9 + 204313951 GGAAGCAgg i calJac3.chr2 C 0 C 0 s canFam3.chr34 11949023 9 + 42124431 GGATGGAGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=19425.000000 s hg38.chr3_KI270937v1_alt 121403 18 + 165607 tcgggcatgcagtggctc s panTro4.chr3_GL389630_random 95451 18 - 103936 tcgggcatgcagtggctc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449619 18 - 202140232 ccgggcatgcagtgactc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1309973 16 + 181584905 ccaggc--gcggtggctc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276415 16 + 174439528 ccaggc--gcggtggctc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400976 16 + 91010382 ccaggc--gcggtggctc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160618 15 + 204313951 ctgggc--gca-tggctc i calJac3.chr2 C 0 C 0 s canFam3.chr34 11949032 18 + 42124431 GCAGGTAAGGACTGGATC i canFam3.chr34 C 0 I 191 e mm10.chr13 74331566 35 + 120421639 I e rheMac3.chr6 180491576 9544 - 180491593 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=36731.000000 s hg38.chr3_KI270937v1_alt 121421 22 + 165607 acgcttgtaatcccagcacttt s panTro4.chr3_GL389630_random 95469 22 - 103936 atgcttgtaatcccagcacttt i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449637 22 - 202140232 acgcctgtaatcccagcacttt i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1309989 22 + 181584905 acgcctgtaatcccagcacttt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276431 22 + 174439528 acgcctgtaatcccagcacttt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1400992 22 + 91010382 acgcctataatcccagcacttt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160633 21 + 204313951 atgcctgtaat-ccaacacttt i calJac3.chr2 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e canFam3.chr34 11949050 191 + 42124431 I e rheMac3.chr6 180491576 9544 - 180491593 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=18522.000000 s hg38.chr3_KI270937v1_alt 121443 15 + 165607 gggaggctgaggcgg s ponAbe2.chr3 2449659 15 - 202140232 gggaggctgaggtgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1310011 15 + 181584905 gggaggttgaggcgg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276453 15 + 174439528 gggaggttgaggcgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1401014 15 + 91010382 gggaggttgaggcgg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160654 15 + 204313951 ggaaggctgaggtga i calJac3.chr2 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e canFam3.chr34 11949050 191 + 42124431 I e rheMac3.chr6 180491576 9544 - 180491593 T e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 95491 0 - 103936 C a score=211597.000000 s hg38.chr3_KI270937v1_alt 121458 120 + 165607 gtggatcacctgagttcaggggttcgagacctgtctggctaacatggtgaaaccccgtctcaactaaaaatataaaaattagccaggcatgatggcaggtgcctgtaatcccagctactc s ponAbe2.chr3 2449674 120 - 202140232 gtggatcacctgagttcaggggttcaagacctgtctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattacccaggcatgatggcgggtgcctgtaatcccagctactc i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482032 120 - 180491593 gtggatcacctgaggtcaggggttcgagacctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagtgaggcatgacggcgagtgcctataatcccagctactc i rheMac3.chr6 T 9544 C 0 s macFas5.chr6 1310026 120 + 181584905 gtggatcacctgaggtcaggggttcgagacctgcctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagtgaggcatgacggcgagtgcctataatcccagctactc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276468 120 + 174439528 gtggatcacctgaggtcaggggttcgagatctgtctggctaacatggtgaaaccccgtctcaactaaaaatacaaaaattagccaggcatgatggcgagtgcctgtaatcccagctactc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1401029 120 + 91010382 gtggatcacctgaggtcaggggttcgagacctgtctggctatcatggtgaaaccccgtctcaactaaaaatacaaaaattagccaggcatgatggcgagtgcctgtaatcccagctactc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160669 119 + 204313951 gtggatcacctgagatcaggggttcaagaccagcctggctaa-atggtgaaaccctgtctttactaaaagtgcaaaaattagccaagcatgatggtgggtgcctgtaatcccagctaccc i calJac3.chr2 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 95491 0 - 103936 C a score=424257.000000 s hg38.chr3_KI270937v1_alt 121578 199 + 165607 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccattgcactccagcctaagcgaca--gagcgagtctccatctccaagaaacaa-agagaGGGAAGTAAAGACCATATCTAAGAAGGAAGTAAGGACCATAGCTACTCTTCTTCAGAAGGAAACTTCCGAATGTATA s panTro4.chr3_GL389630_random 95491 201 - 103936 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgtgccattgcactccagcctaagcgacacagagcgagtctccatctccaagaaacaa-aGAGAGGGAAGTAAAGACCATATCTAAGAAGGAAGTAAGGACCATAGCTACTCTTCTTCAGAGGGAAACTTCCGAATGTATC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449794 199 - 202140232 gggaggctgaggcagaagaatcacttgaacctgggaggcggaggttgcagtgagctgatattgcaccactgcactccagcctaagcgaca--gagcgagtctccatgtccaagaaacaa-aGAGGGGGAAGTAAAGACCATATCTAAGAAGGAAGTAAGGACCATAGCTACTCTTCTTCAGAGGAAAACTTCCAAATGTATC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482152 193 - 180491593 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgaagtgagccgagattgcgccattgtactccagcctaagcgaca--gagcgagactgaatctccaagacaaaa-----agggaaggaaagaccacatctaagagggaggtaagGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATG--TC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1310146 193 + 181584905 gggaggctgaggcagaagaatcgcttgaacctgggaggcggaggttgcagtgagccgagattgcgccattgtgctccagcctaagcgaca--gagcgagactgaatctccaagaaaaaa-----aGGGAAGGAAAGACCATATCTAAGAGGGAGGTAAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATG--TC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276588 195 + 174439528 gggaggctgaggcagaagaatcgcttgaatctggaaggcggaggttgcagtgagccgagattgcgccactgcactacagcctaagcgaca--gagcgagactgaatctccaagaaaaaa---agagggaaggaaagaccATATctaagagggagggaaggaccaTAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATG--TC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1401149 195 + 91010382 gggaggctgaggcagaagaatcgcttgaacctggaaggcggaggttgcagtgagccaagattgcgccactgcactccagcctaagcgaca--gagcgagactgaatctccaagaaaaaa---aGAGGGAAGGAAAGACCATATCTAAGAGGGAGGTAAGGACCATAGCTCCTCTTCTTCAGAGGGAAGCTTCCGAATG--TC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204160788 199 + 204313951 gggaggctgaggtggaagaatcatttgaat-taggaggcggaggttgcaatcagctgagattgcgtcattgcactccagtctgggcgaca--gagtgagactccatctccaaaaaaataaagagaGGGAAGTAAAGACCACATCTAAGAGGGAAGTAAGGACCAGAGCTACTCTTCTTCAGAGGGAAACTTCCAAATGTATG i calJac3.chr2 C 0 C 0 e mm10.chr13 74331566 35 + 120421639 I e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=149875.000000 s hg38.chr3_KI270937v1_alt 121777 84 + 165607 CCCCAGTTTCCCCTCTGCCCCTGAGCACC-TGCTGT----TACAAGCAGGTCAGAGGGCCTCCAATGTCAGCATCTGCGACTGTCC-CC--C s panTro4.chr3_GL389630_random 95692 84 - 103936 CCCCAGTTTCCCCTCTGCCCCTGAGCACC-TGCTGT----TACAAGCAGGTCAGAGGACCTCCAATGTCAGCATCTGCGACTGTCC-CC--C i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2449993 84 - 202140232 CCCCAGTTTCCCCTCTGCCCCTGAGCACC-TGCTGT----TACAAGCAGGTCAGAGGACCTCCAATGTCAGCATCTGCGACTGTCC-CC--C i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482345 82 - 180491593 CCCCCATTT-CCCTCTGCCCT-GAGCACCTTGCTGT----TACAAGCAGGTCAGAGGACCCCTAATGTCAGCGTCTGCGACTGTCC-CT--- i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1310339 81 + 181584905 CCCCCATTT-CCCTCTGCCCT-GAGCACC-TGCTGT----TACAAGCAGGTCAGAGGACCCCTAATGTCAGCGTCTGCGACTGTCC-CT--- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1276783 82 + 174439528 CCCCCGTTT-CCCTCTGCCCC-GAGCACC-TGCTGT----GACCAGTAGATCAGAGGACCCGCAATGTCAGCATCTGCGACTGTCC-CCA-- i papAnu2.chr6 C 0 I 507 s chlSab2.chr4 1401344 81 + 91010382 CCCCCGTTT-CCCCCTGCCCC-GAGCACC-TGCTGT----GACCAGTGTATCAGAGGACCCC-AATGTCGGCATCTGCGACTGTCT-CC-A- i chlSab2.chr4 C 0 I 369 s calJac3.chr2 204160987 82 + 204313951 CCCCAGTTTCCTCTCTGCCC--GAGTACC-TGCTGT----TACAAGCAGGTCAGAGGACTTCCAATGTCAGCATCTGTGACTGTCCTCC--- i calJac3.chr2 C 0 C 0 s mm10.chr13 74331601 57 + 120421639 CCCCAGTTCTCCTTTTGCTCCAAAACTCT-TGCTGTTTGCTACCAACAGGTCAAAGGA---------------------------------- i mm10.chr13 I 35 C 0 e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=282529.000000 s hg38.chr3_KI270937v1_alt 121861 122 + 165607 GTGTCCCATGTTCCCGAGG----CCCTCACC-ACCTGTGCTCCAGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGTTCCAGACTCTTCTACCCCCTGTTCACCTC s panTro4.chr3_GL389630_random 95776 122 - 103936 GTGTCCCATGTTCCCGAGG----CCCTCACC-ACCTGTGCTCCAGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGTTCCAGACTCTTCTACCCCCTGTTCACCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450077 122 - 202140232 GTGTCCCATGTTCCCAAGG----CCCTCACC-ACCTGTGCTCCGGCTCAGACCCAGGAGCACGGCAGGTGGAGGAACATCAGCAGGGGAGACTGATGTTCCAGACTCTTCTACCCCCTGTTCACCTC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482427 122 - 180491593 GTGTCCCATGTTCCCGAGG----CCCTCACC-ACCTGCACTCTGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGTTCCAGACTCTTCTACCCCCTGTTCACCTC i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1310420 122 + 181584905 GTGTCCCATGTTCCCGAGG----CCCTCACC-ACCTGCACTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGCAGGTGACACTGATGTTCCAGACTCTTCTACCCCCTGTTCACCTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1277372 122 + 174439528 GTGTCTCATGTTCCCGAGG----CCCTCACC-ACCTGCACTCCGGCTCAGACCCGGGAGCACGGCAGGTGGAGGAACATCAGTAGGTGACACTGATGTTCCAGACTCTTCTACCCCCCGTTCACCTC i papAnu2.chr6 I 507 C 0 s chlSab2.chr4 1401794 122 + 91010382 GTGTCCCATGTTCCCGAGG----CCCTGACC-ACTTGCGCTCCAGCTCAGACCTGGGAGCACGGCAGGTGGAGGAACATCAGTAGGTGACACTGATGTTCCAGACTCTTCTACCCCCCGTTCACCTC i chlSab2.chr4 I 369 C 0 s calJac3.chr2 204161069 122 + 204313951 GTGTCCTATGTCCCCAAGG----ACCTCTCCTACCTGTGATCTGGCTCAGACCCGAGAGCACAGCAGGTGGAGGAACATCAGCAGG-GAGACTGATGTTTCAGACTCTTCTACTCCCTGTTCATCTA i calJac3.chr2 C 0 C 0 s mm10.chr13 74331658 92 + 120421639 -TGGTTTAGGTTTCCCAGAGTGTCAGTCACC-ACCT--------GATTTAACTAAGGAATATGACAGGTGATGGAACACTAAAGGGAGGA---GGAGAACAGGAC---------------------- i mm10.chr13 C 0 C 0 e canFam3.chr34 11949050 191 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=256169.000000 s hg38.chr3_KI270937v1_alt 121983 142 + 165607 TTCATCTATGCGGGGAAAGTAACAGCTTCCACCCACCTCGCCCAA--------CAAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCACAGGTATGAATTATAAAGATCCTTCGATGTACAAGATCATTAGAAATA s panTro4.chr3_GL389630_random 95898 142 - 103936 TTCATCTACGCAGGGAAAGTAACAGCTTCCACCCACCTCGCCCAA--------CAAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCACAAACCACTCAAAGGTATGAATTATAAAGATCCCTCGATGTACAAGATCATTAGAAATA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450199 130 - 202140232 TTCATCTACGCAGGGAAAGTAGCGGCTTCCACCCACCTCACCCAA--------CAAGGAGGCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAAAGGAGTGAATTATAAAGATCCCTCGATGTACAAGA------------ i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482549 142 - 180491593 TTCATCTATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAA--------CAAGGAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACTACTCAAAGGTAGGAATTAGAAAGATCCCTCGACGTACAAGATCATTAGAAATA i rheMac3.chr6 C 0 I 302 s macFas5.chr6 1310542 100 + 181584905 TTCATCTATGCAGGGAAAGTAACAGCTGCCGCCCACCTTGCCCAA--------CAAGGAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACCACTCAAAGGTA------------------------------------------ i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1277494 99 + 174439528 TTCATCTACGCAGGGAAAGTAACAGTTGCTGCCCACCTC-CCCAA--------CAAGTAGCCTAAGTGACTGACAAGCTCTGTGTAAACCGCAAACCACTCAAAGGTA------------------------------------------ i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1401916 142 + 91010382 TTCATCTACGCAGGGAAAGTAACAGCTGCCGCCCACCTCGCCCAA--------CAAGTAGCCTAAGTGACTGACAAGCTCTGTGTGAACCGCAAACAACTCAAAGGTAGGAATTAGAAAGATCCCTCGATGTACAAGATCATTAGAAATA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204161191 116 + 204313951 TTCATCTACGCAGGGAGAGTAACAGCTTCCACCCACCTCACCCGA--------CAAGGAGCCTAAGCGACCAACAAGCTCTATGTGAACTGCAGACCACTCAAAGGTACGAATTATAAAGATCC-------------------------- i calJac3.chr2 C 0 C 0 s mm10.chr13 74331750 105 + 120421639 --CATCTGTGAAGGG-GGGTAGTGG-TGCTGACCAGGAGTCCAAA--------CCAGAAGGACCAG---CTGATAAGCACT-TGTAAACTGCTTATAACTCAA--GTACCAATTATATCACTA--------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11949241 138 + 42124431 TTCATCTATAAAGGG--AGGAGTAGATCCCCAGCCACTTGCCTGAGGAAAGGCCAAAAAAGTCAAG-AACCAAAAGGCTCTGGGTGGACTACAAACCACTCCAAAGTATTGGTTATAAAGAGCACACAATTTAAAAGGTCA--------- i canFam3.chr34 I 191 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=14406.000000 s hg38.chr3_KI270937v1_alt 122125 35 + 165607 GGAATTATAAAGATCCCTTGATGTATAAGCTCATT s panTro4.chr3_GL389630_random 96040 35 - 103936 GGAATTATAAAGATCCCTTGATGTATAAGATCATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450329 5 - 202140232 ------------------------------TCATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1310642 35 + 181584905 GGAATTAGAAAGATCCCTCGATGTACAAGATCATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1277593 35 + 174439528 GGAATTAGAAAGATCCCTTGATGTACAAGATCATT i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204161307 19 + 204313951 ----------------CTCGATGTAGAAAATCATT i calJac3.chr2 C 0 C 0 s mm10.chr13 74331855 15 + 120421639 --------------------ATTTATAAGTTCACT i mm10.chr13 C 0 C 0 s canFam3.chr34 11949379 4 + 42124431 -------------------------------CAGT i canFam3.chr34 C 0 C 0 e chlSab2.chr4 1402058 0 + 91010382 C e rheMac3.chr6 180482691 302 - 180491593 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1399078.000000 s hg38.chr3_KI270937v1_alt 122160 479 + 165607 AGAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGGAAAAG--CTGCAAATGA---TGTATCTA-------TGACAGTTTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------AGCCTCC-T---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGCAAACAATACAGTACTTTCTGGAAGGAAACATCTGTCTCTTCC-TCTAAGATCTAAAGAGACAACTGCGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTGTGGGAGAGAAGCCAGCACCATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAAGGGCATGGCCAGCTGCTCTGGAGGTAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGTAAGACAG s panTro4.chr3_GL389630_random 96075 479 - 103936 AGAAATAACACAAGATCATATAGGAAAGT-AATTATAAAATGGGAAAAG--CTGCAAATGA---TGTATCTA-------TGACAGTTTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------AGCCTCC-T---------TCCATCCTC-CAGTGATAGAAATTTCAAGTGCAATTTAGAAAACAATACAGTACTTTCTTGAAGGAAACATCTGTCTCTTCC-TCTAAGATCTAAAGAGACAACTGTGAGATGGGCCCCATTGTCCCAGCCTTCTTTCCAGCTGTGGGAGAGAAGCCAGCACCATCACCTGCCCCTCGTAGCTGGTGGGAATGCCGTCCATGTTATAATGCACAGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCGACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAAGGGCATGGCCAGCTGCTCTGGAGGTAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGTAAGACAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450334 478 - 202140232 AGAAATAACACAAGATCATATAAGAAAGT-AATTATAAAATGGAAAAAG--CTGCAAATGA---TGTATCTA-------TGACACTTTACTAAGGAGAAATAAAT---------------------TATTA-----------------------------AGCC-CC-C---------TCCATTCTC-CAGTAATAGAAATTTAAAGTGCGATCTAGAAAACAATACTGTACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTCATCCCAGCCTTCTTTCCAGCTGTGGGAGAGGAGCCAGCACCATCACCTGCCCCTTGTAGCTGGTGGGAATGCCGTCCACATTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACGCCAGTGAAGATCATGGCTGTCTCTGAAAAGCCGGGCAGGCACGTGGCCAGCTGCTCTGGAGGTAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGACCACAGCCTCTGGTAAGACAG i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180482993 480 - 180491593 agaaaTAACACGAGATCATATAGGAAAGT-AACTATAAAATGGAAAAAAGGCTGCAAATGA---TGCATCTA-------TGACAATTTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------AGCC-CC-C---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTACGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTTTCCAGCTGTGGGAGGGCAGCCAGCACCATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAGGCGCGTGGCCAGCTGCTCCGGAGGCAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGGAAGACAG i rheMac3.chr6 I 302 I 4 s macFas5.chr6 1310677 480 + 181584905 AGAAATAACACGAGATCATATAGGAAAGT-AACTATAAAATGGAAAAAAGGCTGCAAATGA---TGCATCTA-------TGACAATTTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------AGCC-CC-C---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTACGATCTAAAGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTATCCAGCTGCGGGAGGGCAGCCAGCACCATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACACCAGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAGGCGCGTGGCCAGCTGCTCCGGAGGCAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGGAAGACAG i macFas5.chr6 C 0 I 4 s papAnu2.chr6 1277628 478 + 174439528 AGAAATAACACAAGATCATATAGGAAAgt-aattataaaatggaaaaaa--ctgCAAATGA---TGTATCTA-------TGACAATTTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------AGAT-CC-C---------TCCATCCTC-CAGTAATAGAAATTTAAAGTACAATCTAGAAAACAAGACAGAACTTTCTTGAAGAAAACATCTgtcttttcc-tctaagatctaaaGAGACAACTGCAAGGTGGGCCCCGTTGTCCCAGCCTTCTATCCAGCTGTGGGAGGGCAGCCAGCACCATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACACCGGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAGGCGCGTggccagctgctccggaggcagGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGGAAGACAG i papAnu2.chr6 C 0 I 4 s chlSab2.chr4 1402058 471 + 91010382 -------ACACGAGATCATATAGGAAAGT-AATTATAAAATGGAAAAAG--CTGCAAATGA---CGTATCTG-------TGACAATTTACTATGGAGGAATAAAT---------------------TATTA-----------------------------AGCC-CC-C---------TCCATCCTC-CAGTAATAGAAATTTAAAATACAATCTAGAAAACAAGACAGTACTTTCTTGAAGAAAACATCTGTCTTTTCC-TCTAAGATCTAAAGAGAAAACTGCAAGGTGGGTCCCGTTGTCCCAGCCTTCTATCCAGCTGCGGGAGGGGAGCCAGCACCATCACCTGCCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACGGTGGGGAGGACAGGGATCGGCTCCTTCGTGACGTCCACATCAGCGAAGATCATGGCTGTCTCTGAAATGCCGGGCAGGCGCATGGCCAGCTGCTCCGGAGGCAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGGAAGACAG i chlSab2.chr4 C 0 I 232 s calJac3.chr2 204161326 473 + 204313951 ATAAATAACACATCATCATTCAGGAACGT-ACTTATAAAATGGAGAAAG--CTGCAAATGA---TGTATCCA-------TGACAACCTACTAAGGAGGAATAAAT---------------------TATTA-----------------------------ACCT-CC-G---------TCCATCCTC-TGGT-----AAATTTAAAGTGCAATCTATGAAACAACACAGTACTTTCTGGAAGAAAATCTCTGTCTTTTCC-TCTAAGATCTAAAGAGACAACTGCAAGGTGGGCCCCACGGTCCCGGCCTTCTTTCCAGCTGTGGGAGAGGACCTGGCACCATCACCTGTCCCTTGTAGTTGGTGGGAATGCCGCCCATGTTATAATGCACAGTGGGGAGCACAGGGATCGGCTCCTTCGTGACGTCCACGCCAGCAAAGATCATGGCTGTCTCCGAAATGCCAGGGAGGCGCGTGGCCAGCTGCTCTGGAGGCAGGTGGTGCAGCTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGGCAAGACAG i calJac3.chr2 C 0 C 0 s mm10.chr13 74331870 435 + 120421639 ----GTAA------ATAATATAGAAAATC-AAATGTAAAATGGTAACAGTGCTTAGTATTA---TAGGTATAAGGGAATTAACATTCTATTGGTTATTACCAAGT---------------------AAATG-----------------------------AAAC-CC-CAAAACATAACCTAGCCTCTCACTGCCTGGCAGGTATAGC---ATTTGATAACTACCATTACACTATC---------AAATGCACTGCATTC-TCTAAGCACTAAAGGGATTTTTGTCAAGT---------------AGCCTTGT------------------------CACCATCACCTGTCCCTTGTAGTTAGTGGGAATCCCACCCATGTTGTAATGCACAGTGGGGAGGACTGGGATGGGCTCCTTAGTGACATCCACACCAGCGAAGATCATGGCCGTCTCTGAAATTCCGGGTAGACGTGTGGCCAGTTGCTCAGGAGGCAGATGATGCAACTGCAGGTAGACGTGATCTTTCTCAGGGCCACAGCCTCTGCAAATACA- i mm10.chr13 C 0 C 0 s canFam3.chr34 11949383 526 + 42124431 AAAAGTAACAAGAGATCATAAAGGAAAATAAATCCTAAACAGGGAAAAG--CTGCAAATGACATTGCATCCA-------CGACTATGTACCATGGAGGGATCAGTAAGTGACCAGTGACTGCTCGCTATTAGAGTGAATGTGAACCCTGGAATATACCCGAGCC-CCGC---------TTTGCCCTC-CAGC---AGCAACTCAAGGG--AGTTGCCAACACAACACAGTGCTTTCT-GAGGAAACCATCTGTCTTCACTAACTGAGCTCGCAAGGGACAACTGTGAGATGGG-CTCATCATTCCTGCCCTATTCCCCACCATGGAAGGGT-CTGGGCTTGGTCACCTGCCCCTTGTAGTTGGTGGGAATGCCACCCATGTTATAATGCACAGTGGGAAGGACGGGGATTGGCTCCTTGGTGACATCCACACCGGCAAAGATCATGGCCGTCTCTGAAATGCCAGGCAGACGTATGGCCAACTGCTCGGGCGGTAGGTGGTGCAACTGCAGGTACACATGGTCTTTTTCGGGGCCACAGCCTCTGGTGGAAAAG i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=20904.000000 s hg38.chr3_KI270937v1_alt 122639 7 + 165607 AACACCA s panTro4.chr3_GL389630_random 96554 7 - 103936 AACACCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450812 7 - 202140232 AACACCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180483477 7 - 180491593 AACACCA i rheMac3.chr6 I 4 C 0 s macFas5.chr6 1311161 7 + 181584905 AACACCA i macFas5.chr6 I 4 I 319 s papAnu2.chr6 1278110 7 + 174439528 AACACCA i papAnu2.chr6 I 4 C 0 s chlSab2.chr4 1402761 7 + 91010382 AACACCG i chlSab2.chr4 I 232 C 0 s calJac3.chr2 204161799 7 + 204313951 AACACCA i calJac3.chr2 C 0 C 0 s canFam3.chr34 11949909 7 + 42124431 GACATCA i canFam3.chr34 C 0 C 0 e mm10.chr13 74332305 0 + 120421639 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=6557.000000 s hg38.chr3_KI270937v1_alt 122646 3 + 165607 TCA s panTro4.chr3_GL389630_random 96561 3 - 103936 TCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450819 3 - 202140232 TCA i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180483484 3 - 180491593 TCA i rheMac3.chr6 C 0 C 0 s macFas5.chr6 1311487 3 + 181584905 TCA i macFas5.chr6 I 319 C 0 s papAnu2.chr6 1278117 3 + 174439528 TCA i papAnu2.chr6 C 0 I 550 s chlSab2.chr4 1402768 3 + 91010382 TCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204161806 3 + 204313951 CCA i calJac3.chr2 C 0 C 0 s mm10.chr13 74332305 1 + 120421639 --A i mm10.chr13 C 0 C 0 s canFam3.chr34 11949916 3 + 42124431 TGG i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=57706.000000 s hg38.chr3_KI270937v1_alt 122649 18 + 165607 CATAAGGCAGAGAATGGC s panTro4.chr3_GL389630_random 96564 18 - 103936 CATAAGGCAGAGAACGGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450822 18 - 202140232 CATAAGGCAGAGAACAGC i ponAbe2.chr3 C 0 C 0 s rheMac3.chr6 180483487 18 - 180491593 CATAAGGCAGAGAACGGC i rheMac3.chr6 C 0 N 0 s macFas5.chr6 1311490 18 + 181584905 CATAAGGCAGAGAACGGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1278670 18 + 174439528 CATAAGGCAGAGAACTGC i papAnu2.chr6 I 550 C 0 s chlSab2.chr4 1402771 18 + 91010382 CACAAGGCAGAGAACTGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204161809 18 + 204313951 CATAAGCCAGAGAACAGT i calJac3.chr2 C 0 C 0 s mm10.chr13 74332306 18 + 120421639 CATGAGGCAAAGAATGGT i mm10.chr13 C 0 C 0 s canFam3.chr34 11949919 18 + 42124431 TGTGAGGCAAAGAATGGT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=339241.000000 s hg38.chr3_KI270937v1_alt 122667 173 + 165607 AACGGCAGCAGACCTGAGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACATGTTTTGATACTGAGGAAAATTTC-CCCTCATGTACGGCCACCCTCtcatcaaatcttttct-----aagcatctact-------gtatgccagggacaatcccaggtgctgggacacagctgagaaccagaac s panTro4.chr3_GL389630_random 96582 173 - 103936 AATGGCAGCAGACCTGAGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACATGTTTTGATACTGAGGAAAATTTC-CCCTCGTGTACGGCCACCCTCtcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcccaggtgctgggacacagctgagaaccagaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2450840 173 - 202140232 AACGGCGGGAAACCTGAGAATACGTCATCTTGGAAGCGTGTGAGTTTCAACATGTTTTGATACTGAGCAAAATTTC-CCCTCATGTATGGTCACCCTCTCCTcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcctaggtgctgggacacagctgagaaccagaac i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1311508 171 + 181584905 AACGGCAGGAGACCTCAGAATACGCCATCTTGGAAGCATGTGAGTTTCA--ATGTTTTGATACTGAGGAAAATTTC-CCCTCATTTATGCtcaccctctcatcaaatcttttct-----aagcatctact-------gtgtgccagggacaatcctaggtgctgggacacagctgagacccagaac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1278688 173 + 174439528 AACGGCAGGAGACCTCAGAATACGTCATCTTGGAAGCATGTGAGTTTCAATATGTTTTGATACTGAGGAAAATTTC-CCCTCATTTATGGTCGCCCTCTCATCAAATCTTTTct-----aagcatctact-------gtgtgcaaGGGACAATCCTAGGTGCTGGGACACAGCTGAGACCCAGAAC i papAnu2.chr6 C 0 I 1113 s chlSab2.chr4 1402789 173 + 91010382 AACGGCAGGAGACGTCAGAATACGTCATCTTGGAAGCATGTGAGTTTCAACATGTTTTGATACTGAGGAAAATTTC-CCCTCATTTATGGTCGCCCTCtcatcaaatctttcct-----aagcatctact-------gtgtgccagggaccatcctaggtgctgggacacagctgagacccagaac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204161827 171 + 204313951 AATGGCAGGAAACCTGAGACTACGTCATCATGGAAGC--GTGAGCTTCCACATTTTCTGATACTAAGGAAAATTTC-CCCTCATGTATGCCCACCCTCtcatcgaatcttttct-----aaatgtctact-------ctgtgccagggacaatcctaggtgctgggacacagctgagaaccagaac i calJac3.chr2 C 0 C 0 s mm10.chr13 74332324 159 + 120421639 ----AAGAAAGAGCTAAGATCAC-------------TATGTTAGACTGAACAATCTTTGATCTTGAGGAAAATGTCACCTTCATCTATGGTCAGTGTCCCATTGATACTTTTTTCCTTCAGGTACTTGTTAATCATAGTGTGTCA-GAACACTTCTGTG---AAGGACACAGCCAAGAAC------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11949937 169 + 42124431 AATTACAGAAAATATGAGATTACGAAGTCACTGAAGCATATAAAGTTCCAC-TGTTCTTATGCTGTACAGAATCTC-TCCTCACTTGTGGCcatccatttctcacctcatttct-----gagcacctacc-------atgtgccagggtggag--tatgtgctgggacacacct-aggactgggac i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=127617.000000 s hg38.chr3_KI270937v1_alt 122840 77 + 165607 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCAGCGGCTGTCCTTGGTAAAAGCATT----A s panTro4.chr3_GL389630_random 96755 77 - 103936 aaaaactctgcccttactgaactcaca--ctc--GTCTCAGGGA-TCACAGGCTGCAGCGGCTGTCCTTGGTAAAAGCATT----A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451013 81 - 202140232 aaaaactctgccctcactgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGAGCATTAGAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1311679 81 + 181584905 aaaaactctgccctccctgaactcaca--ctc--GTCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1279974 81 + 174439528 aaaaactctgccCTCCCTGAACTCACA--CTC--ATCTCAGGGA-TCACAGCCTGCTGCGGCTGTCCTTGGTAAGTGCATTAGAAA i papAnu2.chr6 I 1113 C 0 s chlSab2.chr4 1402962 65 + 91010382 --aaa--------------aactcaca--ctc--atctcaggga-tcacagcctgctgcggCTGTCCTTGGTAAGTGCATTAGAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204161998 79 + 204313951 aaaaactctgccctcactgaactcacg--ttT--GTCTTGGGGA-TCACAACCTGCT--GGTTGTCCTTGGTAATGGCATCACAAA i calJac3.chr2 C 0 C 0 s mm10.chr13 74332483 74 + 120421639 --AGAGCCTATACTCACCAATCTTACATCCTT--GCCTCGGGTA-CTACGATTTCCT---GTTTTCCTTGGTAAATATATTA---- i mm10.chr13 C 0 I 42 s canFam3.chr34 11950106 74 + 42124431 agacatccagccgtcgctaggctcata--ctctagtATCAGAAAGTTACAATGT------GTTTTCCTTGATAAATGCATTA---- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=4683.000000 s hg38.chr3_KI270937v1_alt 122917 2 + 165607 GG s panTro4.chr3_GL389630_random 96832 2 - 103936 GG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451094 2 - 202140232 GG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1311760 2 + 181584905 GG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280055 2 + 174439528 GG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1403027 2 + 91010382 GG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204162077 2 + 204313951 GG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11950180 2 + 42124431 AG i canFam3.chr34 C 0 I 15 e mm10.chr13 74332557 42 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=587668.000000 s hg38.chr3_KI270937v1_alt 122919 367 + 165607 CCTCTATGCCAAAT--agtcgtccctgcgtatccgtggcaggttgggtccaggacccccacggacaccaaaatccgtggatgctcaagtccctaatataaaatggcagagtatttgcatataacctatgcacatcctcctccatattttaaatcat-cctcatttcaagttttacatttaagttgtacagcaactccaggattactcatagtacctaatacaatgtaaatgctaggtaaatagctgctacactgtgttgcttagcgaacaatgacaaggaaaaaaaaaagtctgcgtgttt-gtaaggatgcaattttattttcagtacatagttggttgaaaccacacatgtggaaccgatggatacgga s panTro4.chr3_GL389630_random 96834 364 - 103936 CCTCTATGCCAAAT--agtcgtccctgcgtatccgtggcaggttgggtccaggacccccacggataccaaaatccgtggatgctcaagtccctaatataaaatgggagagtatttgcatataacctacgcacatcctcctccatatttcaaa-cat-cctcatttcaagttttacatttaagttgtacagcaactccaggatgactcatagtacctaatacaatgtaaatgctaggtaaatagctgctacactgtgttgcttagcgaacaatgacaagg--aaaaaaaagtctgcgtattt-gtaaggatgcaattttattctcagtacatagttggttgaaaccacacatgtggaacagatagatacgga i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451096 366 - 202140232 CCTCTATGCCAAATAcagtcgtccttgcgtatccatgccaggttgggtccaggacccccacggataccaaaatccgtggttgctcaagtccctaatataaaatgggagagtatttgcatataacctatgcacattctcctccatattttaaatcat-cctcatttaaggttttatatttaagttttacagcaactccaggattactcatagtacctaaaacaatgtaaatgctacataaatagctgttacactgtgttgtttagggaacaatgacaagg---aaaaaaagtctgcatattt-gtaacgatgcaattttattttcaatacatagttggctgaaaccacacatgtggaaccgatggatacgga i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1311762 366 + 181584905 GCTCTATGCCAAACAcaatcgtccctgcgtatccgtggcaggttgggtccaggacccccatggatactaaaatccgtggatgctcaagtccctaatataaaatggaagagtatttgtatataacctatgcacatcctcctctatactttacatcat-cctcatttaaagttttacatttaagctttacaacaactccaggattactcacagtacctaatacaatgtaaatgctacgtaaatagttgttaaactgtgttgtttagggaacaatgacgggg---aaaaaaagtctgcatattt-gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacaga i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280057 363 + 174439528 GCTCTATGCCAAACACAGTCGTCCCTGCGTATCCGTGGCAGGTTGGGTCCAGGACCCCCATGGATACTAAAATccgtggatgctcaagtccctaatATAAAATGGAAgagtatttgtatataacctatgcaca---tcctctatattttaaatcat-cctcatttaaagttttacatttaagctttACAACAACTCCAGGATCACTCAcagtacctaatacaatgtaaatgctacgtAAATAGTTGTTAAACCGTGTTGTTTAGGGAacaatgacaagg---aaaaaaagtctGCATATTT-GTAAGGATGCAATTTTACTTTCAATACATAGCTGGTTGAAACCACACATGTGGAACCGATGTGTATGGA i papAnu2.chr6 C 0 I 315 s chlSab2.chr4 1403029 366 + 91010382 GCTCTATGCCAAACAcagtcgtccctgcgtatccgtggcaggttgggtccaggacccccatggatactaaaatccgtggatgctcaagtccctaatataaaatggaagagtatttgtatgtaacctatgcacatcctcctctatactttacatcat-cctcatttcaagttttacatttaagctttacaacaactccaggattactcacagtacctaatataatgtaaatgctacgtaaatagttgttaaactgtgttgtttagggaacaatgacgggg---aaaaaaagtctgcatattt-gtaaggttgcaattttactttcaatacatagctggttgaaaccacacatgtggaaccaacgggtacaga i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204162079 363 + 204313951 CCTCTATACCAAAT--agtcatccctgtgtatccatggcagactggctccaggacccccatggataccaaaatctgtggatgttt--gtctctaatatgaaatgggagagtatctgcatataacctatgcacatcctcctccagactttaaatcatccctcacttaaagctgtacacttcagttttgcgacaactccaggattactcatagtacctaacgcaatgtaaatgctatataagtagttgtcatgctgtgttgtttaaggaacaatgacaagg----aaaaaagtctgcatgttcagtaaggatacaactgtatctccaacacatagttggttgaaaccacacatgtggaacccatggatatgga i calJac3.chr2 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=19272.000000 s hg38.chr3_KI270937v1_alt 123286 13 + 165607 gggccACCATATT s panTro4.chr3_GL389630_random 97198 13 - 103936 gggccACCATATT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451462 13 - 202140232 gggccACCACATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1312128 13 + 181584905 cggccACCATATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280735 13 + 174439528 gggccaccatatt i papAnu2.chr6 I 315 C 0 s chlSab2.chr4 1403395 13 + 91010382 cggccATCATATT i chlSab2.chr4 C 0 I 2144 s calJac3.chr2 204162442 12 + 204313951 gggccACCATAT- i calJac3.chr2 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=14930.000000 s hg38.chr3_KI270937v1_alt 123299 20 + 165607 ACAAGAAACCATCCGACTTC s panTro4.chr3_GL389630_random 97211 20 - 103936 ACAAAAAACCATCTGACTTC i panTro4.chr3_GL389630_random C 0 I 2 s ponAbe2.chr3 2451475 20 - 202140232 CCAAAAAACCATCTGACTTC i ponAbe2.chr3 C 0 I 7 s macFas5.chr6 1312141 20 + 181584905 CCAGAAAAACATTTGACttc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280748 20 + 174439528 tcaaaaaaaaaattgacttt i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204162454 18 + 204313951 -CCAAAAACCATTT-ACTTC i calJac3.chr2 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e chlSab2.chr4 1403408 2144 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3314.000000 s hg38.chr3_KI270937v1_alt 123319 3 + 165607 TTT s panTro4.chr3_GL389630_random 97233 3 - 103936 ttt i panTro4.chr3_GL389630_random I 2 C 0 s ponAbe2.chr3 2451502 3 - 202140232 TTT i ponAbe2.chr3 I 7 C 0 s macFas5.chr6 1312161 3 + 181584905 tct i macFas5.chr6 C 0 I 315 s papAnu2.chr6 1280768 3 + 174439528 tct i papAnu2.chr6 C 0 I 4 s chlSab2.chr4 1405552 3 + 91010382 TTT i chlSab2.chr4 I 2144 C 0 s calJac3.chr2 204162472 1 + 204313951 --T i calJac3.chr2 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=23882.000000 s hg38.chr3_KI270937v1_alt 123322 14 + 165607 TTTTTTTAATATAA s panTro4.chr3_GL389630_random 97236 14 - 103936 tttttttaatataa i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451505 14 - 202140232 TTTTTTTAACATAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1312479 14 + 181584905 TTTTTTAAATATAA i macFas5.chr6 I 315 C 0 s papAnu2.chr6 1280775 14 + 174439528 tttttttaatataa i papAnu2.chr6 I 4 C 0 s chlSab2.chr4 1405555 14 + 91010382 TTTTTTTAATATAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204162473 14 + 204313951 TTTTTTAAATATAA i calJac3.chr2 C 0 C 0 e mm10.chr13 74332557 42 + 120421639 I e canFam3.chr34 11950182 15 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=70715.000000 s hg38.chr3_KI270937v1_alt 123336 48 + 165607 AAATGTAAAACCTCTAAAGGCCACACCAGATACCAGCAGATATTTAGC s panTro4.chr3_GL389630_random 97250 41 - 103936 aaaCGTAAAACCTCTAAAGGCC-------ATACCAGCAGATATTTAGC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451519 41 - 202140232 AAATGTAAAACCTCTAAAGGCC-------ATACCAGCAGATATTTAGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1312493 37 + 181584905 AAATGTAAAACCTCTAAAGGCC-------ATACCAGCAGATATT---- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280789 37 + 174439528 aaatgtaaaacctctAAAGGCC-------ATCCCAGCAGATATT---- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1405569 37 + 91010382 AAATGTAAAACCTCTAAAGGCC-------ATACCAGCAGATATT---- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204162487 41 + 204313951 AAATGTGAAACCTCTAAAGGCC-------ATACCAGCAGATACTCAGC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11950197 41 + 42124431 AAATAGAAAGTATCTAGAGGCT-------GTAACACCAAATATCTGAC i canFam3.chr34 I 15 C 0 e mm10.chr13 74332557 42 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=528096.000000 s hg38.chr3_KI270937v1_alt 123384 332 + 165607 AAGTGTTA---TCACATTAA------AGAACAGGGTCAGGCAATGAAAGAGCTGCAAACTGTTCT---TCTGAAAGGCAAATGACCCACACACTTTG-AAAGCTGCCGA--AAAACATCTGTGGGTATCAGACACCACACCCAAGGCTCACACGCCGACTTCAGGTTGG--GTGCGTGTCTCTCTCTCCCATACTCCGTCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAGAAACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCGCAGACTAACAGAC-GCCTGCCGGCAGCTGAGAGAGGTGGCTGTGCACATGTGCCTG s panTro4.chr3_GL389630_random 97291 332 - 103936 AAGTGTCG---TTACATTAA------AGAATAGGGTCAGGCAATGAAAGAGCTGCAAATTGTTTT---TCTGAAAGGCAAATAACCCACACACTTTG-AAAGCTGTCGA--AAAACATCTGTGGGTATCAGACACAACACCTAAGGCTCACACACCGACTTCAGGTTGG--GTGTGTGTCTCTCTCTCCCATACTCCATCACATACTCACACACA--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----AAGAAACTGGCTAAAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGAC-GCCTGCCGGCAGCTGAGAGAGGTGGCTGTGCACATGTGCCTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451560 332 - 202140232 AAGTGTCA---TTACATTAA------AGAACAGGGTCAGGCAATGAAAGAGCTGCAAATTGTCTT---ACTGAAAGCCAAATAACCCACACGCTTTG-AAAGCTGCCGA--AAAACATCTGTGGGTATCAGACACAACACCCAAGGCTCACACACCGACATCAGGTTGG--GTGTGTGTCTCTCTCTCTCATACTCCGTCACATATTCACACACT--------CTAAGAG-AAACTCTGTTCCACAGATTTGAGA-----CAGAAACTGGCTACAATTTTCAAAATGTAGGTCTTTAGGAAAATATCACAGACTAACAGAT-GCCTGCCCACAGCTGAGAGAGGTGGCTGTGCACATGTGCCTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1312530 321 + 181584905 -------------ACATTAA------AGAACAGGGTCAGA-AATGAAAGAGCTGCAACTTGTTTA---ACTGAAAGCCAGATAACCCACACCCTTTG-AAAGCTACCGA--AAAACACCTGTGGGCATCAGACACAACACCCAAGGCTCACGTGCCGACTTCAGGTTGC--GTGTGCGTCTCTCATTCCCGTACTCTGTCACATACTCACCCACA--------CTAAGAG-AAATTCTGTTCCACAGATCTGAGA-----AAGAAACTGGCTAAAATTTTTAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGAC-GCCTGTCAGCAGCTGAGAGAGGTGGCTGTGCACGTGTGCCTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1280826 322 + 174439528 -------------ACATTAA------AGAACAGGGTCAGG-AATGAAAGAGCTGCAAACTGTTTT---ACTGAAAGCCAAGTAACCCACACCCTTTGAAAAGCTGCCGA--AAAACACCTGTGGGCATCAGACACGACACCCAAGGCTCACGTGCTGACTTCAGGTTGC--GTGTGCGTCTCTCTCTCCCGCACTCTgtcacatactcacacaca--------ctaAGAG-AAACTCTGTTCCACAGATCTGAGA-----AAGAAACTGgctaaaattttcaaaatgtaggtctttaagaaaataccacagactaaCAGAC-GCCTGTCAGCAGCTGAGAGAGGTGGCTGTGCACGTGTGCCTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1405606 322 + 91010382 -------------ACATTAA------AGAACAGGGTCAGG-AATGAAAGAGCTGCAAACTGTTTT---ACTGAAAGCCAAGTAACCCACACCCTTTGAAAAGCTGCCGA--AAAACACCTGTGGGCATCAGACACGACACCCAAGGCTCACGTGCTGACTTCAGGTTGC--GTGTGCGTCTCTCTCTCCCGTACTCTGTCACATACTCACACACA--------CTAAGAG-AAACTCCGTTCCACAGATCTGAGA-----AAGAAACTGGCTAAAATTTTCAAAATGTAGGTCTTTAAGAAAATACCACAGACTAACAGAC-GCCTGTCAGCAGCTGAGAGAGGTGGCTGTGCACGTGTGCCTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204162528 325 + 204313951 AAGTG--------TCATTAA------GGAACAGGGTCAGGCAATGAC----CTGCAGATTGTTTCTAAACTGAAAGCCAAATAACCCACACACTTTG-AAGAATGCTGA--CAAACATCTGTGGGTATCAGACGCAACAGCCAA-GCTCACATGCCGACCTCAGGTTGGGAGCGTGTGTCTCTCTCTCCCATAATCTATCACATACTCACACACA--------CTCAGAG-AAATTATGTTCCACAGATTTGAGA-----AAAAAACTGGCTAAAGTTTTCAAAATGTAGGTCTTTAGGTAAATATCACAGACTAACAGAT-GCCAGCCAGTAGCT--GAGAGGTGGCTATGCACGTGTGCCTG i calJac3.chr2 C 0 I 154 s mm10.chr13 74332599 302 + 120421639 AAGTGTCAAACCCACAATAAGTCCCTAGATTAAAGCCAGGCACT--TGGAACCTAAGGCAATTTC---ACTAAAAGACAAGTGACACACAAGCCCTG-AAGAACACCTGCCAAAACACCTGT-AATATTGATTAAAACAAATTAACTCCTAAGGCTGAGTATTAGCTGA--GCCTGAGAATCTCA-----------------------GCTCATA--------CCAAGAATAAATGATGATACACTTATGTG--------------------AAGACTCTCAAAATATATGCCTTTAAGGATATATCATAAATTAACAGGT-GTTAGTCAAAAAAT-AATGACGTAGCTTTATTCTCTAACCCT i mm10.chr13 I 42 C 0 s canFam3.chr34 11950238 291 + 42124431 AAGCATCA---CCACAGTGA--------GACAGTG-CTGGCACTGAAGAGCCT----AACGCTTC---AGCAAA----CAAGAGCCCACACA------CAGGGTCCCAA-----------------ATCAG------CATCAAAGGCCCACATCCTAACGTCAGGTTGT--AAGCATATCCGTCTCTCTCACA---------ACACTCATGTGCAAATGATGCTCCACAA-TAAATCTGATCTCCAGATTTGAGATTCACATCAAACCACCCAAACTTCCCAAAATATAGGTTTTTAGAGCAATATCAAAAATGAAAAGATAGTCCCAGGGCAGC----AAAGGTAACTACACACAGGC----- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1314203.000000 s hg38.chr3_KI270937v1_alt 123716 653 + 165607 CACACGAAGGTGAG------GGCGAGCG-GTGCTGAAACTCACAGAAGCAACCCC--------------------------------------------------------------------GGCCCGTGTGCC---------CGCTCAGACA----------GTGCTGGTGGTAAA--------------------------CCACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGATGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCGTAATGAGACAACCAGCACCATATGTGCCTGCAAAAAAC-CAC---------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA-CTTTTTTTTACAAGATATTTTTTGGGGGAGAGACAAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAACAGA---AAGAACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGTGGCGTCCCCAGAGAGGAGAAAGGCCGGCCC----------ACAGACCTCTGGCCAATACTCTGATTACAGCCCGGTGTA-----------------------CGTTGGATGCCTCAAATTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC-----TAGTTAAGAAT--ACTAGCTTGGAGAATTCATATCTAA s panTro4.chr3_GL389630_random 97623 653 - 103936 CACACGAAGGTGAG------GGCGAGTG-GAGCTGAAACTCACAGAAGCAACCCC--------------------------------------------------------------------GGCCCGTGTGCC---------CGCTCAGACA----------ATGCTGGTGGTAAA--------------------------CCACACGCACCTTCCTTCGCGGATCTCCAGAGTCATCCACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCGATGGGGGCGTATCGCTCCATAAACCTTTCACCTTGACTGTTAATGAGAATGCCTCCCTCTCCACAACATCCTTCCGTAATGAGACAACCAGCACCATATGTGCCTGCAAAAAAC-CAC---------ACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA-TTTTTTTTTACAAGATATTTTTTGGGGGAGAGACTAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAACAGA---AAGAACAGTTATGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGCTGGGGCAGAGTGGCGTCCCCAGAGAGGAGAAAGGCCGGCCC----------ACAGACCTCTGGCCAATACTCTGATTACAGCCTGGTGTA-----------------------CGCTGGATGCCTCAAATTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGAC-----TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2451892 651 - 202140232 CACCCGAAGCTGAG------GGTTAGCG-GTGCTGAAACTCACAGAAGCAACCCC--------------------------------------------------------------------GGCCCGAGTGCC---------CGCTCAGACA----------ATGCTGGTAGCAAA--------------------------TCACATGCACCTTCCTTTGCAGATCTCC--AGTCATCGACGGACACACCACATCTCGAGATGCCAGGTCCTTCGCGACGGGGGCATATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAAAATGCCTCCCTCTCCACTACATCCTTCCGTAATGAGACAACCAGCACCATATGTGCCTGCAAAAACCACAC---------ACGTTTATAACCTAACAATTGCTAGCTCTCTATTTCAAATGCATTA-TTTTTTTTT-CAAGATATTTTTTGGGGGAGAGATGAAAAAGATATGCAGAAGGCAGTATATGC----AAAACTGAATAGA---AAGAACAGTTAACATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCACAGGCTGGGGCAGAGTGGCGTCCCCAGAGGGCAGAAAGGCCGGCCC----------ACAGACCTCTGGCCAATACTCTGATTACAGCCTGGTGTA-----------------------CGTTGGATGCCTCAAATTTTGTTTTAATTTTTGAACATTCTTCTGCACTATGATACTGGAGTGAC-----TAGTTAAGAAT--ACTAGCTTAGAGAATTCATATCTAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1312851 652 + 181584905 CACACGAAGGTGAG------GGCGAGCG-GTGCTGGAACTCACAGAAGCAACCCC--------------------------------------------------------------------GGCCCGTGTGCC---------CACTCAGACA----------ATGCTGGTGGTAAA--------------------------TCACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCGTAATGAGACAACCGGCACCATATATGCCTGCAAAAAAC-CAC-------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTATTTTTTTT---CAAGAT-TTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAATAGA---AAGAACAGTTAAGATACAGTAGAAAGTCTGGATAACAAAAAGCACTGACGAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCAGCCC----------ACAGACCTCTGGCCGATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGCATGCCTCAAATTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC-----TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1281148 648 + 174439528 CACACGAAGGTGAG------GGCGAGCG-GTGCTGGAACTCACAGAAGCAACCCC--------------------------------------------------------------------GGCCCGTGTGCC---------CACTCAGACA----------ATGCTGGTGGTAAA--------------------------TCACACGGACCTTCCTTCACGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACGGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCCGTGATGAGACAACCGGCACCATATATGCCTGcaaaaaac-cac-------aaacatttaTAACCTAACAATTGCTAGGTCTCTAtttcaaatgcatta-ttttttt---caagatattttttgggggagagaggaaaaagatatGCAGAAGGCATTATATGC----AAAACTGAATAGA---AAGAACAGTTAAGACACAGTAGAAAGTCTGGATAACAAAAAGCACTGACAAGGCTGACAGCTGCAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAG----GCCC----------ACAGACCTCTGGCCGATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGGATGcctcaaattttgttttaatttttgaacatTCTTTTGCACTATGACACTATGGTGAC-----TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1405928 652 + 91010382 CACACGAAGGTGAG------GGTGAGCA-GTGCTGGAACTCACAGATGCAACCCC--------------------------------------------------------------------GGCCCGTGTGCC---------CACTCAGACA----------ACGCTGGTGGTAAA--------------------------TCACACGGACCTTCCTTCGCGGATCTCCAGAGTCATCGACCGAGACACCACATCTCTAGACGCCAGGTCCTTCGCCACAGGGGCGTATCGCTCCATAAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCTTTCCGTAATGAGACAACCGGCACCATATATGCCTGCAAAAAAC-CAC-------AAACATTTATAACCTAACAATTGCTAGGTCTCTATTTCAAATGCATTA-TTTTTTT---CAAGATATTTTTTGGGGGAGAGAGGAAAAAGATATGCAGAAGGCATTATATGC----AAAACTGAATAGA---AAGAATAGTTAAGACACAGTAGAAAGTCTGGATAACAAAAAGCACTGATGAGGCTGACAGCTGAAGCAGAGGTTGGGGCAGAGCAGTGTCCCCAGCGAGGAGAAAGGCCAGCCC----------ACAGACCTCTGGCCGATACTCTGATTACAGCCCAGTGTA-----------------------CGCTGGATGCCTCAAATTTTGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTAAC-----TAGTTAAGAAT--ACGAGCTTGGAGAATTCATATCTAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204163007 710 + 204313951 CACACGAAGGTGAG------GGCGGGCA-GTGCTGAAACT--CAGAAGCAACGCCCTCCCAGATGCTAAAACAAACATGAAGTC-ACCAAAGAG-GAAGTGAAGGGAAGGAAGAGTGTGCACGTGCCCGTGTGCC---------TGCTCAGACG----------ACTCTGGTGATAAA---------------------------CATACAGACCTTCCTTCGCGGATCTCCAGAGTCATGGACCGAGACACCACATCTCTGGATGCCAGGTCCTTCGCAACGGGGGCGTATCGCTCCATAAACCTTTCGCCCTGACTGTTAATGAGAATGCCTCCCTCTCCACGACATCCTTCTGTGATGAGACACCCAGCACCATAGATGCCTGAAAAAAA--CAC-------AAACATTTATAACTCAACAATTGCTAGGTCTCTATTTCAAACACA----TTTTTTT---CAAGGTA-TTTTTACGGTAGAGAGG--AAGGATAGGCAGAAGGCATCATATGC----AAAACTGAATAGAAAGAAGAAAAGTTAAGATACAGTAGGAAGTCTGGATACCAAGGAGCACTGACAGGGCTGACGG-TGCAGC--AGGTCTGGGCAGAGCGGAGTCCCCAGCGAGCAGAACGG--AGCCC----------ACAGAGCTGTGGCC-ATACTTGGATTGCAGCCTGCTGTG------------------------GTTAAATGCCTCCAATTTGGTTTTAATTTTTGAACATTCTTTTGCACTATGATACTGTGGTGACTACTTTAGTTAAGAAT-AACCAGCCTGGAGAATTCACATCTAA i calJac3.chr2 I 154 C 0 s mm10.chr13 74332901 638 + 120421639 AACCCTGAGGGCAG------GGCACCTGTGTGCAAAAG----TAGATGTGACCTA------------------------ATGCCTACCAAAGAGAAAAGTG----------------------GACACGTTTTTCCACCCCCTACACTCCTGCA----------TCCCTGAAGGAGAA--------------------------TTACA--GACCTTCCTTCACGGATCTCAAGAGTCATGGATCGAGACACAACATCTCTTGATGCCAGGTCCTTGGCAACAGGTGCGTATCTCTCCATGAACCTTTCACCTTGACTGTTGATGAGAATCCCCCCCTCTCCACGACACCCTTCTGTGATGAGGCAGCCAGCACCGTATATACCTGTAAAAATC-CAA--TGATTAAATGTTTATAAATGAACGAGCACTAGGAAACTACTTCAAATGGTTAA-TCCTTCTTTAGAAGCCACTTTTTGGG------------AGTAGACACAAAGAACATTAAACTC----AA-----AATAAG---AAGAAAAGTCAAGTAGGAGAAGGAA-TGTGTGTGACAAGCAGCAGCAACAAACCAGAAAG---CACAAGAGCTTCAGGAACAGCAGCTCACTCACAGGG--------------------------------TCTAACACATACTCTGACTAAACACCA-------------------------------TCCATGCTTATAGATTTAAT---GTTTTTAAATATATCTTTATACCAAGA-AATGCGATAACAAGTTTAGGCAGGGATAAAACAACTTAGAGAATTTCTATCTTA i mm10.chr13 C 0 C 0 s canFam3.chr34 11950529 693 + 42124431 TACACAGAGCTGGGTGGGATGATGCGTGGGTGCTGAAACACACAAAAGCCACATC--------------------------------------------------------------------AGCCCATGTTAA---------AATACAGACACCAACAACAGCCACCAAAGAGAAAGGAGGGGTGCATGCATGCATGTGCGCTCTGACACACCTGCCTTCACGGATTTCCAGAGTCATGGACCGAGATACAACGTCTCTGGATGCCAGGTCCTTTGCGACTGGGGCATATCGCTCCATGAACCTTTCGCCTTGACTGTTAATGAGAATGCCTCCCTCTCCACGGCATCCTTCCGTAATGAGACAACCAGCACCATATATACCTGCAAAGAAC-CCATTTAATTAGATGTTTATAACCTAACAATTGCTAGGTCTGTATTTCAAATGCA-AA-TTTTTTT---CAAGACATTTTTGGGG----AAAGGAAAAAGATATGGAAAGGGCATTGTGCTCCTAAAAGAGTTAGACAA---AGGAAAGGTTAAGGAAGAGT--GAAGTTTTGATAACAAAAAGTACTGACAAAG----------CAGCAG---------------------------GAGGGGAAAGCTCAGCTCCGTGGTGATGACATAGCTCGGCTGAATATTTCGATGACAACCATGTGTGAACTTTCAACACAACCAAGTACGTGTTAAATATCTCAGGCTTCCTTTTAATTTTAGAATGTTGTTTTATACCAAGAAATTGTGATGAG-------GTAGAAAAA--AACAGTTTGGAAAGTTTGTATCTAA i canFam3.chr34 C 0 I 531 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=172728.000000 s hg38.chr3_KI270937v1_alt 124369 118 + 165607 GTTACCCAAACAGTGGCAAGAACagtaataatgattattttagttcatctttacactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtcttacaac s panTro4.chr3_GL389630_random 98276 118 - 103936 GTTACCCAAACAGTGGCAAGGACagtaataatgattattttagttcatctttacactgcacttgctatgggcagttctagctgctttccacatattaaactcatttaagtcttacaac i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2452543 118 - 202140232 GTTACCCAAACAGTGGCAAGGACGGTAATAATGATTCTTTtagttaatatttacactgcacttgctatgggcagttctagctactttccacatattaaactcatttaagtcttacaac i ponAbe2.chr3 C 0 I 12 s macFas5.chr6 1313503 114 + 181584905 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttacttaatattcacactgcacttgctaggggcagttccagctgctttccaca---t-aactcatttaagtcttacaac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1281796 116 + 174439528 ATTACCCAAACAGTGGCAAGGACAGTAATAATGATTATTTTAGTTAATATTCACACTGCACTTGCT-GGGGCAGTTCTAGCTGCTTTCcacatgtt-aactcatttaaGTCTTACAAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1406580 116 + 91010382 ATTACCCAAACAGTGGCAAGGACagtaataatgattattttagttaatattcacactgcacttgct-ggggcagttctagctgctttccacatgtt-aactcatttaagtcttacaac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204163717 107 + 204313951 ATTACCCAAACAGTGGCAAGGTCAGTAACA---ATTATTCTAGTTAAT----ACACTGCatttgccatggacagttctagctgctttccgcctatt-aactcatttaagctttac--- i calJac3.chr2 C 0 C 0 s mm10.chr13 74333539 80 + 120421639 AGTCCTGAAACA------------GCAAAAATTATTTTAATGGTTAGTATTTATGTTTCA------------------AG------TCTAAACATT-TACTCATTTCATGTCTATGA- i mm10.chr13 C 0 C 0 e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=47884.000000 s hg38.chr3_KI270937v1_alt 124487 45 + 165607 aactctgggtagtatgaccccctttctcagtgacaagcaaattaa s panTro4.chr3_GL389630_random 98394 45 - 103936 aactctgggtagtacgaccccctttctcagtgacaagcaaattaa i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 1313617 44 + 181584905 aactccgggtagtactacccgctttctcagtgac-agcaaattac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1281912 44 + 174439528 AACTCCGGGTAGTACTACCCGCTTTCTCAGTGAC-AGCAAATTAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1406696 44 + 91010382 aactccgggtagtactacccactttctcattgac-agcaaattac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204163824 45 + 204313951 aactccaggtagtaggacccccattctcactgacaagcacattaa i calJac3.chr2 C 0 C 0 s mm10.chr13 74333619 40 + 120421639 -----TGGGTACTAAGAAGTCTATCCTCAGAGGCAAAAAAAAAAA i mm10.chr13 C 0 I 38 e ponAbe2.chr3 2452661 12 - 202140232 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=109372.000000 s hg38.chr3_KI270937v1_alt 124532 85 + 165607 cgcttggtaacatccagtcatgcagctgaggacagagctcaaacccaaacctgggcagtccggcggtctgtgccccaaacAGCGG s panTro4.chr3_GL389630_random 98439 85 - 103936 cgcttggtaacatccagtcatgcagctgaggacagagctcaaacccaaacctgggcagtccggcggtctgtgcccCAAATAGCGG i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 1313661 85 + 181584905 cgcttggtaacatccagtcatgcagttgaggacacagctcaaacccaaacctgggcagtctggcggtctgtgctccaaacAGCGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1281956 85 + 174439528 CGCTTGGTAACATCCAGTCATGCAGTTGAGGACACAGCTCAAACCCAAACCCGGGCAGTCCGGCGGTCTGTGCTCCGAACAGCGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1406740 85 + 91010382 cgcttggtaacatccagtcatgcagttgaggacacagctcaaacccaaacctgggcagtccggcggtctgtgctccaaacAGCGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204163869 84 + 204313951 tgc-tggtaacatccagtcatgcagctgaggacagagttcaaaccccaacctgggcagcccggcggtgtgtgctccaaacAGCGG i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333659 38 + 120421639 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=413214.000000 s hg38.chr3_KI270937v1_alt 124617 327 + 165607 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTTAACAAAGGAGATC------------AAAAACCCTAAACTAAATGTATTTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTCAAGACAAGAATGTGATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCCATGCTC----TTTTTTCTGTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAAGCAAATTACA-GAGGGAATTCAGGGGCTCACTGACATTTTGCTGATTAAAAACAGTAAT-AAAAAATACAAC s panTro4.chr3_GL389630_random 98524 327 - 103936 CTCTGTGACTCCTCAGTGCGATGAGAAACAGGGCGTGCCAAGCTCTCGAATTTTAACAAAGGAGATC------------AAAAACCCTAAACTAAATGTATTTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTCAAAACAAGAATGTGATTCTTGCATCTCACCTGCCTTTTGATTTTCTAAGTTTCTATGCTC----TTTTTTCGGTGG-TTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGAAGCTCTAAGCAAATTACA-GAGGGAAGTCAGGGGCTCAGTGACATTTTACTGATTAAAAACAGTAAT-AAAAAATACAAC i panTro4.chr3_GL389630_random C 0 C 0 s macFas5.chr6 1313746 330 + 181584905 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCTAATTTTAACAAAGGAGATC------------AAAAACCCGAAAGTAAACGTATTTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACGAGAATGTGATTCTTGCATCTTGCCTGTCTTTTGATTTTCTAAGTTTCAATGCTC---TTTTTTTCTGTGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAAGCAAATTACA-GAGGGAATTCAGGGACTCAGTGACATTCTATTGATTAAAAAAAGTAATAAAAAAATACAAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1282041 329 + 174439528 CTCTGTGACTCCTCAAGGCGATGAGAAACAGGGCATGCCTAGCTCTCGAATTTTAACCAAGGAGATC------------AAAAACCCGAAACTAAACGTACTTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACAAGAATGTGATTCTTGCATCTCACCTGTCTTTTGATTTTCTAAGTTTCAATGCTC----TTTTTTCTGCGGATTACTTCCCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAAGCAAATTACA-GAGAGAATTCAGGGGCTCGGTGacattttattgattaaaaaaagtaacaaaaaaatacaac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1406825 329 + 91010382 CTCTGTGACTCCTCAATGCGATGAGAAACAGGGTATGCCTAGCTCTCTAATTTTAACAAAGGAGATC------------AAAAACCCGAAACTAAACGTATTTCAAAAGCTACAATTTTTATTAGTATACAAAAAGGGCAATCTTGCTTTTAAAACGAGAATGTGATTCTTGCATCTCACCTGTCTTTTGATTTTCTAAGTTTCAATGCTC----TTTTTTCTGTGGATTACTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAAGCAAATTACA-GAGGGAATTCAGGGGCTCAGTGACATTTTATTGATTAAAAAAAGTAATAAAAAAATACAAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204163953 341 + 204313951 CTCTGTGACTCCTCGACGCCATGAAAACCTGGGCATGCTGAGCGCTCAGATTTTAACAAAGGAGATCAAAAACCCACAAAAAAACCCTAAACTGAATGTATTTCAAAAGCTACAATTTGTATTAGAATACAAAAAGGGCAATCTTGCTTTTAAAACAAGAATGTGATTCTCGTATCTCACCTGCCTTTTGATTTTCTAAGTTTCAATGCTCTTTTTTTTTTGTGTGGATAGCTTCTCACATATTGAAGACAAAGCATGAGAAGTGGAGCTCTAAGCAAATTACA-GAGGAAATTCAGGAGGTCAGTGACATTTGATCGGTTAAAAACAGTAAT-AATAAAC---AC i calJac3.chr2 C 0 C 0 s mm10.chr13 74333697 282 + 120421639 TTTTGTGTC-CTTCAGTGTAAGGAAAGACAAGGGATGCCAAG-TATTGAGTTTTAAGGGAAGAGACT----------------------AAGTAAGGGTTATTTTAAAGCCA-GTTTTCCTTTCATATGCCAAAAGGTTA--CATGCTCTAAAAG--------------------------TGCTTTTCACTTTTCATAGCTTCAGTAACA----TCTGTCGGGTAG-TTTATTTTTATATATTGTAAAGAAAGTATAAGAAATGAAGTGCTAAACACAGTATGTGACTGGCTCCAGAGGCTCAGAGACACTAGAC-----AGAAACTGAAGT-AAGAAAACTAAC i mm10.chr13 I 38 I 246 e ponAbe2.chr3 2452661 12 - 202140232 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=243770.000000 s hg38.chr3_KI270937v1_alt 124944 209 + 165607 Aggccgggtgcagtggctcatggctataatgccagcaccctgaggggccgaggcaggaggatcgcctaagccctggcgtttgagaccagcctgggcttaaaatggtgacaccctgtctctaccaaaaacaaaaaaaccctcaaaaattagctgggcatggtaacacatgcctgtagtcccagctatttgggaggctgaggtgcaaggat s panTro4.chr3_GL389630_random 98851 209 - 103936 Aggccgggtgcagtggctcatggctataatgccagcaccttgacgggccaaggcaggaggatcgcctaagccctggcgtttgagaccagcctgggcttaaaatggtgacaccctgtctctaccaaaaacaaaaaaaccctcaaaaattagctgggcatggtaacacatgcctgtagtcccagctatttgggaggctgaggtggaaggat i panTro4.chr3_GL389630_random C 0 I 20 s macFas5.chr6 1314076 207 + 181584905 Agaccaggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgagaccagcctgggc--aaaacggtgacaccccatctctaccaaaaacaaaacaaccctcaaaaattagccgggcgtggtaacgcatgcctgtagtcccagccgtttgggaggctgaggtggaaggat i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1282370 207 + 174439528 agacccggtgcagtggctcatggctataatcccagcactttgaggggccgaggcaggaggatcgcctaagccctggagtttgagaccagcctgggc--aaaacggtgacaccccgtctctaccaaaaacaaaacaaccctcaaaaattagccgggcatggtaacgcatgcctgtagtcccagccgtttgggacgctgaggtggaaggat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1407154 207 + 91010382 Aggccgggtgcagtggctcatggctataatcccagcactctgaggggccgaggcaggaggatcgcctaagccctggagtttgagaccagcctgggc--aaaacggtgacaccccgtctctaccaaaaacaaaacaaccctcaaaaattagctgggcatggtaacgcatgcctgtagtcccagccgtttgggacgctgaggtggaaggat i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204164294 207 + 204313951 Aggctaggcgcggtggctcatgcctggaatcccagcactctgggaggctggggcaggtggattccttaagctcaggagtttgagatcagcctgggc--aaaatggtgaaaccatgtctctgccaaaaaaataaaaaataaaaaaataaagctgggcatggtaatgtatgcctgtagtctcagctgtttgggaggctgaggtggaaggat i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333979 246 + 120421639 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=68045.000000 s hg38.chr3_KI270937v1_alt 125153 86 + 165607 cgtttgagcctgggagacaaaggctgcagtgagtcaagattgctccactgcac----tccagcctgggcaacagagcaagaccccatctc s macFas5.chr6 1314283 86 + 181584905 cctttgagcctgggagacaaaggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtctc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1282577 86 + 174439528 cctttaagcctgggagacaaaggctgcagtgagccaagactgctccactgcac----tccagcctgggcaacagagcaagaccccgtctc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1407361 86 + 91010382 cctttgagcctgggagacaaaggctgcagtgagccaagactgctccactgcac----cccagcctgggcaatagagcaagaccccgtctc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204164501 88 + 204313951 tgtttgagtccgggaggcactggctgcggtgagacaagactgctccactgcactccatccagcctgg--aacagagcaagaccctatctc i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333979 246 + 120421639 I e canFam3.chr34 11951222 531 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=531063.000000 s hg38.chr3_KI270937v1_alt 125239 653 + 165607 taaacaaatt--------aa--aaaaaaaaCCTACAACAAATCCATTTCTTATTTTCATCCCTTCCAGGGATCAGAAAGCTGACACTGACAGAG-AAAGAGAAGACACAGGTCTGGTTCTTTGGC------------ACCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAAAAGTC----CAGGACGAGTCACCTCAAACAAGAGGCAGACGTGTGTG--TGTCTGTCTCTGACTCA-TTTTGAAGAACCTCCTCCAAACTCAAGACTTCAACTGTCATTTCTGAGTTAATGTCTCCAAATTGCACATTCGTAACCTCAACCGTCAGACGTCCCCAAGACGAGCTCATCTTCCCCACGAC-AAGCTCCCTCAGTGGTCACGTGGGCTGAG-CCCAGCGCCC---------AACGTCACATGGGGTTCTCTCATGGCTGTGTCTTAACTTTACATCCCATTGTCACGGAAGCTCTGTGTTGT-CCTACAAAGCTGAAATCTGCCTGTGCTGCTTCTTGGTTCCACGGCATTCACC-CAGCTCTCAGAATGCtcactcagtaaaccccgatggagaccctaccatgtgctgggcgtggagcaccccagttaatgagaagacctgcctg----cccgagttgctgacaacctcactgcaaa-gagggacactgaacaattcctgcttta s macFas5.chr6 1314369 651 + 181584905 taaacaaatt-----aaaaa--aaaaaaaaCCTACAACAAATTCATTTCTTATTTTCATCCCTTCCAGGGACCAGAAAGCTGACACTGACAGAG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGC------------ACCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAG-----TCAAACAAGAGGCAGATGTGTGTG----TCTCTCTCTGACTCA-TTCTGAAGAACCTCCCCCAAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAACTGCACATTCGTAAGCTCAACCGTCAGACGTCCCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCGGAGCCCCAACGTCC--------GAACGTCACACGGGGTTCTGTCACGGCCGTGCCCTAACTTTACACCCCATTATCGCGGAAGCTCCGTGTTCT-CCTACAAAGCCGAAATCTGCCCGTGCTGCTTCTGGGTTCCACGGCATTCTCC-CAGCTCTCAGAACGCtcactcagcaaaccctgatggagaccctgccacgtgctgggcatgggccaccccagctaatgagaagacctgcctg----cccgaggagctgacgacctcgttgcgaa-gagggacactgaacaatccctgcttta i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1282663 663 + 174439528 taaacaaattaaaaaaaaaa--aaaaaaaacctacaacaaattcatttcttatttttatccctTCCAGGGATCAGAAAGCTGAcactgacagag-aaagagaaggcacAGGTCTGGTTCTTTAGC------------ACCACTTCA----GGGGTCTCCATC-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAGTCACCTCAAACAAGAGGCAgatgtgtgtg--tctctctctctgactca-tTCTGAAGAACCTCCCCCAAACTCAAGACTTCAAATGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTCGTAAGCTCAACCGTCAGACGTCCCTGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCTGAGCCCCAATGTCC--------GAACGTCACACGGGGTTCTGTCACGGCTGTGCCCTAACTTTACATCCCATTATCGCAGAAGCTCCATGTTCT-CCTACAAAGCCGAAATCTGCCTGTGCTGCTTCTGGGTTCCATGGCATTCTCC-CAGCTCTCAGAATGCTCATTCAGTAAACCCTGATGGAGACCCTACCACGTGCTGGGCATGGGCCACCCCAGCTAATGAGAAGATGTGCCTG----CCCGAGGAGCTGACGACCTCGTTGTGAA-GAGGGACACTGAACAATCcctgcttaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1407447 667 + 91010382 taaacaaattaaaaaaaaaaacaaaaaaaaCCTACAACAAATTCATTTCTTATTTTCATCCCTTCCAGGGATCAGAAAGCTGACACTGACAGAG-AAAGAGAAGGCACAGGTCTGGTTCTTTAGC------------ACCACTTCA----GGGGTCTCCATT-GTCCACAGGTCAGAAAAGCAACC--CAGAGAAGTC----CAGGACGAGTCACCTCAAACAAGAGGTAGATGTGTGTGTCTCTCTCTCTCTGACTCA-TTCTGAAGAACCTCCCCCCAACTCAAGACTTCAACTGTCATTTCTGTGTTAATGTCTCCAAATTGCACATTTGTAAGCTCAACCGTCAGACGTCTCCGAGATGAGCGCATCTTCCCCACAAC-AAGCTCCCTCAGTGGTCGTGTGGGCTGAGCCCCAATGTCC--------GAACGTCACACGAGGTTCTGTCACGGCTGTGCCCTAACTTTACACCCCATTATCGCGGAAGCTCCATGTTCT-CCTACAAAGCCGAAATCTGCCTGTGCTGCTTCTGGGTTCCACGGCATTCTCC-CGGCTCTCAGAATGCTCCCtcagtaaaccctgatggagaccctgccacgcgctgggcgtgggccaccccagcgaatgagaagacctgcctg----cccgaggagctgacaacctcgttgtgaa-gagggacactgaacaatccctgcttaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204164589 650 + 204313951 taaacaaaTT-------------ACAAAACCCCACGACAAATACATTTTTTATTTTCATCCCTGCCAGGGATCAGAAAGATGCCACTGAGAGAG-AAAAAGAAGACACAGGTCTGGTTCCTTAGC------------ACCACTACA----GGGGTCTCTGTA-GTCCACAAGTTAGAAAAGCAATC--CAGGAAAGTCACATCACGACGAGTCACATCAAACAAGAGGCAGATGTG--------TCTCTCTCTGACTCATTTCTGAAAAGCGTCCCCCAAACTCAAGACTGCAACTGTCATTTCTGTGTTAATGTCTCCAAACTGCACATTCGTAACCTCAACCATCAGACGTCCCCAAGGTGAGTTCATCTCCCCCAGGACGAAGCTCCTTCAGTGGTCACGTGGGCTGAG--CCAATGCCT--------AAATGTCACATG-GGTTCTGTCACAGCTGTGTCCTAACTTTGCACCCCACGATCACAGAAGCTCCATGTTCT-CCTACGAAGCTGAAATCCGCCTGTGCTGCTTCTTGGGTCCACGGCACCCTCC-CAGCTCTCAGGGTGCtcactcaggaaaccctgatggaggccctgccatgtgctgggcttggagaaccccggtcaatgagaagacctgcccgc--ccccaagaagcacatgaccttgttgcgaattagggacactgaacaatccctgcct-- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11951753 610 + 42124431 taaataaatCCTTAAAGAAG--CAAAACTACTTAAA-------CATTTTTATTTTTCAT--CTGTCAGGGATCAGAAAAAATATACTGACAGAGCAAAGAGAAAAAACAGATCTGGTTCTGTAGCAAGGTGGGTGGTACTGCCATAAAGTGTGGTGTCCCTCAGTTGATAGATCAGAAAAGCAATCAGAAAGAAAGTC----CAGAATGAGACTCATC------------------------TCTCCTTCTCTGATTCACTTCTGGATAA-------CAAAcc--agacctgcaccctcagcccagacct--cccttctgaaccccacatttgcacactcaactgtctGAGGAC-CCAAGAGGAGCTCAATCTGTCCATGAC---------------------TGGGCAGTT-ACCAACATCTTGGGGGGGGGGGGTCATG------TCTGCCACAGCT-CATCTCAGCTTTATACTCTACTACTGGGACAGCTTGATGTCCTCCCTACAGCG----ACTGTGCCCATGCCACATCTCG--TCAACAGCATCCCCCACAGCTGTGAGGacattcactt-gtaaatactgcc-caggtcctactgtgcgtcaggcactgtgaacac---------agcagtactggcccccacctctgggagcagaccactgagtcaggga-gaggaatactgaacagtcatggctcta i canFam3.chr34 I 531 I 21 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333979 246 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=277548.000000 s hg38.chr3_KI270937v1_alt 125892 368 + 165607 ctttttttttttttttttttgagacgaagtcttactctgttgcccaggctggagcgcagtggtgcgatctcggctcactgcaacctctgcctcccaggt----tcaagcattcctcccgcctcagcctcccaagtagctgggatcacaggtgcatgccaccatgcccagctgatttttttatgtttagtagagatgaggtttcaccatgttgtgcaggctggtcttgaactcctgacctcaggtgatccacctgccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcccggcctcaatccctgctttactgctggcataagtatcaccaaggcagggtttagggctcttgagaaatgca s macFas5.chr6 1315020 361 + 181584905 c-------ttttttttttttgagacggagtcttactctgttgcccaggctggagtgcaggggtgcgacctgggctcactgcaacctctgcctcccaggt----tgaaacattcctcccacctcagcctcccaagtagctgggattataggtacatgccaccacgccatgctgatttttgtattttcagtagacatgaggtttcaccatgttggtcgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattccaggcatgagccaccgcgcctggcctcaatccctgctttactgctggcacaagtatgatcaaggcagggtttagggctcttcagaaatgca i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1283326 363 + 174439528 c-----ttttttttttttttgagacggagtcttactgtgttgcccaggctggagtgcaggggtgtgatctcggctcactgcaacctctgcctcccagat----tcaagtattcctcttgccttggcctcccaagtagctgggattacaggtacatgccaccacgccatgctgatttttgtatttttagtagagatgaagttttaccttgttggttgggttggtctcaaactgctgacctcaggtgatccggccgccccggcctcccaaagtactgggattacaggtgtgagccaccgcgcctggcctcaatccCTGCTTTACTGCTGGCACAAGTATCACCAACGTAGGGTTTAGGGCTCTTCAGAAATGCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1408114 361 + 91010382 c-------ttttttttttttgagacagagtcttactctgttgcccaggctggagtgtaggggtgcgatctcggctcactgcaacctctgcctcccagat----tcaagtactcctcttgccttggcctcccaagtagctgggattacaggtacatgccaccacgccatgctgatttttgtattttcagtagagatgaggtttcaccatgttggctgggctggtcttgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcctcaatccctgctttactgctggcacaagtatcaccaaggcagggtttagggctcttcagaaatgca i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204165239 362 + 204313951 --------ttttttttacttgagatggagtcttactctgttgcccaggctggagggccgtggcacgatctgagctcactgcaacctctgcct--caggttcagtcaagcgttcctcctgcctcagtctcctgagtagctgggattacaggcacctgccaccatgcccacctaatttttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaacccctgacctcaggtgatccacctgcctcgacctcccaaagtgctgagatgacaggtgtgagtcactgtgcccggcctcaatccccgctttactgctgggataagtatcaccaaggcagggtttagggttcttgaggaatgcg i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333979 246 + 120421639 I e canFam3.chr34 11952363 21 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=100720.000000 s hg38.chr3_KI270937v1_alt 126260 134 + 165607 taagatggtggcccaaactgccttaggggaaggggagtgtgggaaaagtctccttaaggaaatgacattgaagttaggacctgagagctatggaagctgatcTTCAAAACCATGTTATTACATAAAACTATGGA s macFas5.chr6 1315381 134 + 181584905 taaaacgctggcccaaactgccttaggggaaggagagtgtaggaaaagtctccttaaggaaacgacattgaagtgaggacctgagagctgaggaagCTGATCTTCAACACCATGTTATTACATAAAACCATGGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1283689 134 + 174439528 TAAGATGCTGGCCCAAACTGCCTTAGGGGAAGGAAAGTGTGGGAAAAATCTCCTTAAGGAAATGACATTGAAGTGAGGACCTGAGAGCTGAGAAAGCTGATCTTCGACACCACGTTACCACATAAAACCATGGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1408475 134 + 91010382 taaaacgctggcccaaactgccttaggggaagggaagtgtgggaaaagtctccttaaggaaacgacattgaagttaggacctgagagctgagaaagCTGATCTTCAAAACCACGTTACCACATAAACCTATGGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204165601 104 + 204313951 taagacggtggcccaaactaccttaggg------aggtgtgggcaaagtctccttaaggaaatgacatttaagtcaggacctgagagccgagaaag------------------------catagaactatgGC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11952384 100 + 42124431 taagatg-tgccctaagctgctttgggg------gagacagggaaagatctccttgagcaaatgac----aaggtgggctctgagaac-----------------------atgtcagtgtatggaattgccga i canFam3.chr34 I 21 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74333979 246 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=421735.000000 s hg38.chr3_KI270937v1_alt 126394 439 + 165607 AGAGCAATGAGTAGGCACCACAC--------------GCTTACAAGACACAC--GAGCCGAACGCCTTCCGGGCAAGGCGTCCTGCCCTACCTGTGGGGTGGAACTGAACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCTGGTGCTGGTGTGGGCAGACGTGCAGCTCAAGTAGGTGCGCCCGTAGCCTATGGAAA----------CAACAGAGAGCAGTGACTGCACACAGTGGCCCACGTCCGGACCTCCTGTCTAATGAGATCACAGAACGGACAGGGCAGCCCCC-GGGCACCATCTTCTCAGTGC----TGT------GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACGCCAGTGGTGCTGCTACCCTGCGCAGGTAGGATAGAAGCCTG-GGATCAGAGAAGAGACTTCCATTTATAtttta s macFas5.chr6 1315515 430 + 181584905 GGAGCAATGAGTAGGCACCACAC--------------GCTTATAAGACACACATGAGCTGAACACCTGCCGGGCAAGGTGTCCTGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CAACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCACAGAATGGACACAGCAGCCCCC-GGGCACCGTCTTCTCA-----------------GTGCACACAACCCCCTACTCACGCACACCCCACACACATCAC--TGGGGGCCACACCAGTGGAGCTGCTACCCTATGCATGTAGGATAGAAGCCTG-GGATCAGAGAAGGGACTTCCAtttgtat---- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1283823 443 + 174439528 GGAGCAATGAGTAGTTGGCTTACAACTTACAAGTACAGCTTACACGGCACATGTGAGCTGAACGCCTGCCAGGCAAGGCGTCCTGCCCTACCTGTGGGGTGGAACTGAACGAACTCTAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGATCATGGCCGTGCCGTCGCCCGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CAACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCCTGTCTGGTGAGATCACAGAATGGACACAGCAGCCCCC-GGGCACCGTCTTCTCA-----------------GTGCACACAACCCCCTGCTCACgcacaccccacacacatcac--TGGGGGCCACAGCAGTGGGGCTGCCACCCTGTGCGGGTAGGACAGAAGCCTG-GGATCAGAGAAGGgacttccatttgt-t---- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1408609 443 + 91010382 GGAGCGATGAGTAGTTGCC-TACAACTTACAAGTAGAGCTTACAAGACACACATGAGCTGAACGCCTGCCAGGCAAGGTGTCCTGCCCCACCTGTGGGGTGGAACTGAACAAACTCTAGGTCCTGGCAAGGAAGGTCTGCCCTGGTGATCATGGCCATGCTGTCACCGGTGCTGGTGTGGGCA-----------GAAGTAGGTGCACCCGTAACCTCTGGAAA----------CAACAGACAGCAGTGACTGCACACAGCGGCCCACGTCCGGACCTCTTGTTTGGTGAGATCACAGAATGGACACAGCAGCCCCC-GGGCACCATCTTCTCAGTGC----TGTC-TGT-GTGCACACAACCCTCTACTCATACACACCCCACACACATCAC--TGGGGGCCATACCAGTGGAGCTGCTACCCTATGCAGGTAGGATAGAAGCCTG-GGATCAGAGAACGGACTTCCAtttgtat---- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204165705 423 + 204313951 AGAGCAATGAGTAGGCACCACAC--------------GCTTATGAGACACACATGAGCCCGATGCCTGC----------ACTGTGCCCTACCTGTGGGGTGGAACTGGACAAACTCGAGGTCCTGGCAAGGAAGGCCTGCCCTGGTGACCATGGCTGTGCCATCACCGGTGCTGGTGTGGGCAGACGTGCAGCTGAAGTAGGTGCGCCCGTAGCCTCTGGAAA----------CA--AGAGAGCAGTGACTGCACACAGCAGCCCACATCCAGACCTCCTGTCTGATGAGACTGC-GAATGGACATGGAGACACCCGGGGCACCACCTTCTCAGTGC----TGTC-TGT-GTGCACACAACCC-CTCCTCAGGTA---CCCCCACACATCAC--TGGGGGCCACGCCTGTGGTGCTGCTACCCTGC----GTACGATAGAAGCCAG-G--TCAGAGAAGGGACTTCCATCTGTAtttta i calJac3.chr2 C 0 C 0 s mm10.chr13 74334225 416 + 120421639 AAAGCAAGGAATAGGTACTGCAT--------------GCTTGAAATACACAGAAGAGCCCAGAGCCAGAC-----AGGTATTCTGTCCTACCTGTGGGGTGGAACTGAACAAATTCTAAGTCCTGGCAAGGCAAACCAGCCCTAGTGACCATGGCTGTGCCGTCCCCTGTGCTGGTATGGGCAGATGTACAGCTGAAGTAGGTTCGCCCGTAGCCCCTGAAAG----------C---AGAAAACAGTGACTATAAGCATCAGTCCACA-CCAAACTTCCTCTTATATGGT-----------------GCAGTCTCTGGGGCACCAACCTCTAATGACCCCTTGCT-TGTAATGTTCTCTGCCCCATGCATGTATATACACGACACACAATACGTGGGAGGCCATACTTGTGATGTTCTTAAC--------ATAAGATGGAGGCTAG-GAGACAGAGAAGGGGAATA---TTGTATTTTT i mm10.chr13 I 246 C 0 s canFam3.chr34 11952484 384 + 42124431 ggagcattgag-agctgtggagg--------------gCTTAAAAGACATGAAAATCCCTGACCCCATGAAGGCA----ATCCCATCCTACCTGTGGGGTGGAACTGAACGAACTCCAAGTCCTGGCAGGGAAGGCCTGCCCTGGTGACCATGGCGGTGCCGTCACCGGTGCTGGTGTGGGCAGATGTGCAGCTGAAGTAGGTGCGCCCATAACCTCTGGAAAACAGACATGCCAGCATGGAGAGAACATGACACACAGTGAACCA--TCAGGTCTGCCTTTCTAATGGCACCA--GAGTGGACAGAGCAGCCCAG-AAGCAC-----TCTGACAGC----TGCTGTCT-GTATACACTACCC-------------------------------TGGGCA------------------------------GCTGGGTGGGAGCCTGAGGGACAGAGAAGGCACTTTCATTGGTACTTTA i canFam3.chr34 C 0 I 9 e ponAbe2.chr3 2452661 12 - 202140232 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=2646.000000 s hg38.chr3_KI270937v1_alt 126833 7 + 165607 tttattt s macFas5.chr6 1315945 3 + 181584905 ----ttt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1284266 3 + 174439528 ----ttt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1409052 3 + 91010382 ----ttt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166128 4 + 204313951 t---ttt i calJac3.chr2 C 0 C 0 s mm10.chr13 74334641 7 + 120421639 TGTATTT i mm10.chr13 C 0 I 2036 e ponAbe2.chr3 2452661 12 - 202140232 I e canFam3.chr34 11952868 9 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=262985.000000 s hg38.chr3_KI270937v1_alt 126840 330 + 165607 atttatttattttgagatagggtctaactcttgtcgcccaggctggagtacggtggcacaatctcggctcacggcaacctctggctcccaagttcaagtgattcttctgcctcagcctcccaagtacctgggaatacaggtgtgcaccaccacatccaattgatttttgtatttttagtagagactgggtttcgccacgttggccacgctggtcttgaactcctgacctcaggtgatccacccacttcggcctcccaaagtgctgggattacaggcatgagccactatgcgtctggccCTATTTGTATTTTAGATTTGTGCTGTTCAAAA s macFas5.chr6 1315948 329 + 181584905 atttatttattctgagatagagtctaactc-tgtcacccaggctggagtacagtggcacgatctcggctcacagcaacctccagctcccaggttcaagtgacttttccgcctcagcctcccgggtagctgggattacaggtgtgcaccaccatgcccagttaatttttgtatttttagtagggatggggtttcgccatgttggcccggctggtctcgaactcctgacctcaagtgatcctcccacttcggccttccaaagtgctgggattacaggcatgagccactgcacgtctggccCTGTTTGTATTTTAGCTTTGTGCTGTTCAAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1284269 329 + 174439528 attgatttattttgagacagggtctaactc-tgtcgcccaggctggagcacagtggcacgatctcggctcacggcaacctctggctctcaggttcaagtgactcttccgcctcagcctcccgggtagccgggattacaggtgtgcaccaccacgtccatttaatttttgtatttttagtagagatggggtttcgccatgttggccaggctggtcttgaactcctgacctcaagtgatcctcccacttcggcctcccaaagtgctgggattacaggcatgagccactgcacgcctGGCCCTGTTTGTATTTTAGCTTTGTGCTGTTCAAAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1409055 329 + 91010382 atttatttattttgagatagagtctaactc-tgtcgcccaggctggagtacagtggcacgatctcggctcacagcaacttccggctcccaggttcaagtgacttttccgcctcagcctctcgggtagctgggattacaggtgtgcaccaccatgctcagttaatttttgtatttttagtagagattgggtttcgccatgttggccaggctggtcttgaactcctgacctcaggtgatcctcccacttcggcctcccaaagtgctgggattacaggcatgagccactgcgtgcctggccCTATTTGTATTTTAGCTTTGTGCTGTTCAAAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166132 329 + 204313951 atttatttattttgagatagggtcttgctc-tgtcgcccaggctggagtgcagtgacgcaatctcggctcactgcaacctccacctcccaggttcaagcgattctcccgcctcagcctcctgagtagctggaattacaggtatttaccaccacacccagttaatttttgtcttttttgtagaaatggggttttgtcaagttggccaggctggtctcaaactcctgacctcaagtgatcttcccactttggccttccaaagagctgggattacaggcacgaggcaccatgcACCTGACCCTATTTGTATTTTAGCTTTGTGCTGTTCAAAA i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952868 9 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=62190.000000 s hg38.chr3_KI270937v1_alt 127170 59 + 165607 GGTTTCCCCAGTAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT s macFas5.chr6 1316277 58 + 181584905 GATTTCCCCAATAAGCATATACTACTTTTATAATGAAAATTTTAAAATTTTTATGGAT- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1284598 59 + 174439528 GATTTCCCCAATAAGCATATActacttttataatgaaaattttaaaatttttatggatt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1409384 59 + 91010382 GATTTCCCCAATAAGCATATGCTACTTTTATAATGAAAATTTTAAAATTTTTATGGATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166461 59 + 204313951 GGTTTCCCCAATAAGCATATACCACttttataatgaaaatttttaaatttttatGGATT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11952877 57 + 42124431 GACTTCCCTGATAAGCACGTGCTACTTTAATACAGAAGGCTGT--AATGTTTATGGATT i canFam3.chr34 I 9 I 4 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=90238.000000 s hg38.chr3_KI270937v1_alt 127229 137 + 165607 TTG-TTtttttcccccagatttactgaggtatgattgatgaattaaac-aaaaaacaatactgtatatatttaaggtgtacagcgtgatgatt-----tattttgtgaactgatgacacaatcaacttaatacacatctatcac s macFas5.chr6 1316335 139 + 181584905 ----TTTTTTCCCCCCCAAtttactgaagtatgattgatgaattaaaa-aaaaaaaaaaaccgtatatatttaaggtgtacaatgtgatgatttgatatattttgtgaactgatgacacaatcaaattaatacacatctatcac i macFas5.chr6 C 0 I 1272 s papAnu2.chr6 1284657 144 + 174439528 ttgcttttttccccccagatttACTGAGGTATGAttgatgaattaaaataaaaaacaaaagtgtacatatttaaggtgtacaatgtgatgatttgatatatttTGTGAACTGATGACACAATCAAGTTAatacacatccatcac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1409443 144 + 91010382 TTGCTTtttttcccccagatttactgaggtatgattgatgaattaaaataaaaaacaaaagtgcatatatttaaggtgtacaatgtgatgatttgatatattttgtgaactgatgatacaatcaagttaatacacatccatcac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166520 125 + 204313951 TTG--TTTTtttccccagatgtactgaggtataattgatgaattaa---aaaaaac----ctgtatatatttaaggtac--------atgatttcatatattttgtgaactgaagacacaagttaatta--acacatctattac i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=26948.000000 s hg38.chr3_KI270937v1_alt 127366 69 + 165607 ctcatacaattatccttttttttggagatacagacacctaaggtctactctcttcgcaaatttcaagtt s papAnu2.chr6 1284801 68 + 174439528 ctcatacAATTAT-CGtttttttGGAGATACAGACGCTTAAGGTCTACTCTGTTCGCAAATTTCAAGTT i papAnu2.chr6 C 0 I 3 s chlSab2.chr4 1409587 68 + 91010382 ctcatacaattat-cgtttttttggagatatagacgcttaaggtctactctgttcgcaaatttcaagtt i chlSab2.chr4 C 0 I 3 s calJac3.chr2 204166645 68 + 204313951 ctcatctaattatccttttttctggagatatggacacctacagtctacacc-ttagcaaatctaaagtt i calJac3.chr2 C 0 I 4 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e macFas5.chr6 1316474 1272 + 181584905 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=6116.000000 s hg38.chr3_KI270937v1_alt 127435 9 + 165607 atattaatg s macFas5.chr6 1317746 9 + 181584905 ATATTCACT i macFas5.chr6 I 1272 C 0 s papAnu2.chr6 1284872 9 + 174439528 ATATTAACT i papAnu2.chr6 I 3 C 0 s chlSab2.chr4 1409658 9 + 91010382 atattaact i chlSab2.chr4 I 3 I 1502 s calJac3.chr2 204166717 9 + 204313951 atattaact i calJac3.chr2 I 4 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=58549.000000 s hg38.chr3_KI270937v1_alt 127444 103 + 165607 atagccaccgtactgtat----gattttaactgtagccaccatgctgtat----aatgttaactctggccaccatgctctat----aacattaactctagccaccatgctgttta s macFas5.chr6 1317755 103 + 181584905 ATAGCCACCATGCTGTAT----AATATTCACTATAGCCACCGTGCTGTAT----AATGTTAACTGTAGCCACCGTGCTGTAt----aatattcactatagccaccatgttgtata i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1284881 103 + 174439528 CTAGCTACCGTGTCGTAT----AATATTAACTATAGCCCCCATGCTGTAT----AATGTTAACTCTAGCCACCGTGCTGTAT----AATATTCACTCTAGCGACCGTGCTGTATA i papAnu2.chr6 C 0 I 1388 s chlSab2.chr4 1411169 103 + 91010382 ATAGCCACCGTGCTGTAT----AACATTCACTATAGCCACCATGCTGTAT----AATGTTAACTGTAGCCACCGtactgtat----aatattcactatagccaccatgttgtata i chlSab2.chr4 I 1502 C 0 s calJac3.chr2 204166726 111 + 204313951 atagcc-tcatgttgtacgttagatATTAACTATAGCC-CCATGTTGTACGTTAGATATTAACTATAGCC-CCATGTTGTACGTTAGAtattaactatagcc-ccatgttgtatg i calJac3.chr2 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=10690.000000 s hg38.chr3_KI270937v1_alt 127547 28 + 165607 tcagaccttcagaacttcaccttgtgac s macFas5.chr6 1317858 28 + 181584905 ttagaacttctgaacctcacctggtaac i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1411272 28 + 91010382 ttagaccttctgaacctcacctggtaac i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166837 28 + 204313951 ttagctcttcagaacttcatcttATaac i calJac3.chr2 C 0 I 78 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=119762.000000 s hg38.chr3_KI270937v1_alt 127575 491 + 165607 gggaagttacacctttaatcagcatcgccacagtctgcattcccccagcccctggcaaccactgtcctattctgtttctgtgagttgtgacagttttaga-tccacatatgagtgacatgcagtatctgtctttctgtgcctgggtcgtttcacttaacataatgactttgggttcatccacgttgtcacacatgacaggatttccttcgttttcatagctgaataatattcagttgtgtacacacaccacattgtcattaaacaccaa-aaatttttaggttgtttccatatctcgggtattgtgaataacgctgcaatgaacatgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatgaggttgctggagcacatggtagtcctgtgacttttgaggaacctccagagttttccacaatagttgtactaatttacattcccaccaacagcacacagggttccc s macFas5.chr6 1317886 492 + 181584905 gagaagtcacacctttcatcagcatcgctgcagtctgcattcccccagcccctggcaaccaccgtcctactctgtttccatgagttttgacttttttagattccacatataagtgacatgcagtatctgtcattctgtgcctggcttgtttcacttaacataatgactttgggttcatccctgttgtcacaaatgacaggattcccttcattttcatagctgagtaatattcagttgcgtatacacaccacattttccttaaacaccaacacatacttaggttttttccatatctcgggaactgtgaacaacgctgcaatgaacatgggggtccaggtgtctctttgagcttctgatttcatgccctttggatatacacccagaaatggggttgctggagcacatggtagtcctgtgaattctgaggaacctccagagttttccacaatagttgtactaatttacattccccccaacagcacacaggg-tccc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1411300 490 + 91010382 gagaagtcatacctttcatcagcatcgctgcagtctgcattcccccagcccctggcaaccactgtcctactctgtttctatgagttttgacttttttagattccacatagaagtgacatgcggtatctgtcattctgtgcctggcttgttttacttaacgtaatgactttgggttcatccctcttgtcacaaatgacgagattcccttcgttttcatagctgagtaatattcagctgcgtataca---cacattttccttaaacatcaacacatatttaggttttttccacatcttgggaactgtgaacaacgctgcaatgaacatgggggtccaggcgtctctttgagcttctgatttcatgccctttgaatatacacccagaaatggggttgctggagcacatggtagtcctgtgaattctgaggaacctccagagttttccacaatagttgtactaatttacattccccccaacagcacacagggttccc i chlSab2.chr4 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74334648 2036 + 120421639 I e calJac3.chr2 204166865 78 + 204313951 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=75111.000000 s hg38.chr3_KI270937v1_alt 128066 280 + 165607 ttttctccacatcctcatcaacactcactatcttttgtcctcttggtaacagccattctaactggagcgagatgagatgata-ctcattggggttttaatttgcatttctctggtgcttggtgatgttgagcattttttcatacatcaactggccatttgtatgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttagtagggtttagtaggttggtttt-agtagggcttttttttattttttatttttttttg s macFas5.chr6 1318378 264 + 181584905 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttagtagggtttagtaggttgttttt-agtagggtt-----------------tttttttt i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1411790 266 + 91010382 ttttctccacatcctcaccaacacttgctctcttttgtcctcttggtaacagccattctacctggagtgagatgagatgatgtctcattggggttttaatttgcatttctctggtgcttagtgatgttgagcattttttcatacatcaattggccatttgtttgtcttc---tctggaaaaatatctattcaagtcctttgcccatttttagtagggttgttttttagtagggtttagtaggttgtttttcagtagggtt----------------gtttttttg i chlSab2.chr4 C 0 C 0 s mm10.chr13 74336684 225 + 120421639 TTTCCTCTACATCTTCATCAACATTTACCATCTGT----ATCATTACATTAACCATCC-----------------------GCACAAAtatggatgttacttgaattctccagatgttcaatggtgctgagca--ctttcataaatttgctgaccatgtgtattccctccaacctgg--aaacatctattcaggttctataccta-tttaaaaatgtttgtttACT--TAAACtttctttccttttcttt--------tt-----------------ttttttt- i mm10.chr13 I 2036 I 88 e ponAbe2.chr3 2452661 12 - 202140232 I e calJac3.chr2 204166865 78 + 204313951 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=300.000000 s hg38.chr3_KI270937v1_alt 128346 1 + 165607 c s macFas5.chr6 1318642 1 + 181584905 c i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1412056 1 + 91010382 c i chlSab2.chr4 C 0 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74336909 88 + 120421639 I e calJac3.chr2 204166865 78 + 204313951 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=26960.000000 s hg38.chr3_KI270937v1_alt 128347 80 + 165607 tattttagatactaagatatcattagatatatggtttggaaaatattttttcccaccctgtagttttgctgatttttttt s macFas5.chr6 1318643 79 + 181584905 tattttagatactaaaatattattagatataaggtttggaaaatattttttcccaacctgtagttttgctga-ttttttc i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1412057 79 + 91010382 tattttaggtagaaagataatattagatatatggtttggaaaatattttttcctaacctgtagttttgctga-ttttttc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204166943 65 + 204313951 tattttagatattgaggtattatcagacaaatggttttgaaaatattttcccccaacctatagTT--------------- i calJac3.chr2 I 78 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e mm10.chr13 74336909 88 + 120421639 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=6808.000000 s hg38.chr3_KI270937v1_alt 128427 24 + 165607 cttggctgtactgacacttcttaa s macFas5.chr6 1318722 23 + 181584905 cttcgctgtactgacagttttt-a i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1412136 23 + 91010382 cttcactatactgacagctttt-a i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167008 20 + 204313951 ----GTTGTACAGATAGTTTTTAA i calJac3.chr2 C 0 C 0 s mm10.chr13 74336997 24 + 120421639 ctgagatataccttcagcTTATAA i mm10.chr13 I 88 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e canFam3.chr34 11952934 4 + 42124431 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=4230.000000 s hg38.chr3_KI270937v1_alt 128451 3 + 165607 ctt s macFas5.chr6 1318745 3 + 181584905 ctt i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1412159 3 + 91010382 ctt i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167028 3 + 204313951 CTT i calJac3.chr2 C 0 C 0 s mm10.chr13 74337021 3 + 120421639 CTT i mm10.chr13 C 0 C 0 s canFam3.chr34 11952938 3 + 42124431 CTT i canFam3.chr34 I 4 C 0 e ponAbe2.chr3 2452661 12 - 202140232 I e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=264567.000000 s hg38.chr3_KI270937v1_alt 128454 349 + 165607 TTAAAGTGGCTAAAGTAAC----TGCCACTGTATAAAATTAAAGTTTTTTATTTTCATTATGTGGAGAAGACAGACTTATCTATCCCAG-GAATCAGTATAAACATAGAACCCACTAAA-ACAAGAGGGATTTTGCCAGAAAACCCCATGTGActcttcgggc-cacagtttc-----------ctcatctaaaatc---------------------------------------gggaGAGGTACGCTGT---------GAACCTGA--CGGCAGCCACTACCGACTAATGAGGGCCATGC------------------------------------------------------------TTTCTCAC-------CCC-----------GAGGCAGGTGCTGCTGTCCTCA---------CCCTTTACAGGTGAGGAACCATGGCTGGGAAAGGCCATCACCCTCACGTGGTTATATCAAGGCCTGTGTCTGAACTGCTAT s ponAbe2.chr3 2452673 349 - 202140232 TTAAAGTGGTTAAAGTAAC----TGACAGTGTATAAAATTAAAGTTATTTATTTTCATTATGTGGAGAAGACAGACTTATCTATCCCAG-GAATCAGTATAAACACAGAACCCACTAAA-ACAAGAGAGATTTTGCCAGAAAACCCCATGTGACtcttcgggc-cgcagtttc-----------ctcatctaaaatc---------------------------------------gggagaggtaagctgt---------gaacctga--tgGCAGCCACTACCGACTACTGAGGGCCATGC------------------------------------------------------------GTTCTCAC-------CCC-----------CAggcaggtgctgctgtcctca---------ccctttacaggtgaggaaccacggctgggaaaggccatcaccctcacacggttaTATCAAGGCCTGTGTCTGAACCGTTAT i ponAbe2.chr3 I 12 C 0 s macFas5.chr6 1318748 350 + 181584905 tgaAAATGGTTAAAGTAAC----TGACAGTGTATAAAATTAAAGTTACTTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAA-CCCCATGGGActcttcgggc-cgcagtttc-----------ctcatctaaaatc---------------------------------------gggaGAGGTAAGCTGT---------GAACCTGA--CGGCAGCCACCGCCGTCTACTGAGGGCCATGC------------------------------------------------------------TTTCTCGC-----CGCCT-----------GAGGCAGGTGCTCCCGTCCTTA---------CCCTTCACAGGTGAGGAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTTAT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1412162 351 + 91010382 tgaAAATGGTTAAAGTAAC----TGACAGTGTATAAAATTAAAGTTACTTATTTTCGTTATGTGGAGAAGAAGGACTTACCCATCCCAG-GAATCAGTATTAACACAGTACCCACTAAA-ACAAGAGGGATTTTGCCAGAAACCCCCATGGGActcttcgggc-cgcagtttc-----------cgcatctaaaatt---------------------------------------gggagaggtaagctGT---------GAACCTGA--TGGCAGCCACCCCCGTCTACTGAGGACCATGC------------------------------------------------------------TTTCTCAC-----CGCCT-----------GAGGCAGGTGCTCCCGTCCTTA---------CCCTTCACAGGGGAGCAACCACGGCTGGGAGAGGCCATCACCCTCACAAGGTTATATCAAGGCCTGTGTCTGAACCGTTAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167031 336 + 204313951 TTAAAATGGTTAAAATAACAGATTGACAGTGGATAAAATTAAAGTTACTTA-TTTCATTATGTGGAGAAGCAAGAGTTATCCAACCTAG-GTACCAGTATAAACACAGTACCCACTAAA-ACAAGA--GATTTTGCCAGAAAACCCCATGTGActctttaggc-cacagtttc-----------ctcatataaagtc---------------------------------------aggaggggttagctgt------------------------------tccatctcctgagggccctGC------------------------------------------------------------TTtctcaa--cctcccac-----------aaggtgggtgctgctgtcctca---------tggtttacagatgaggaaccacagctgggaaaggccatcatcctcacaaggttaTGTCAAGGCCTGTGTCTGAACCGTTAT i calJac3.chr2 C 0 C 0 s mm10.chr13 74337024 276 + 120421639 TAAAAATGGTAAAAA--------TGAAATCTTATTAACTGAAATGTACT--------TTATG--------------------ATTCTAA-GAATCAGTAT--ACTTAGTAAACAAGAAA-GCAGGA--AAGTTTATCTGAAAATACCATGTGACTCTCTAAGCTTACTATTT---------------ATATTAAAAC---------------------------------------AGGTAAAGTAAGCT------------------------------------------------------------------------------------------------------------------TTATAAT-------CCC-----------AAATTTTGCCCCATTATGCTCAGAGAACATCTATATTGTGACAAAGGTACCAAGGCTGGGAAAGGTTATCTTCTGCATGAGATGACATGAAGGCCTACGTCTGACCCATTGC i mm10.chr13 C 0 C 0 s canFam3.chr34 11952941 480 + 42124431 -TTAAAGGCTTAAAATAAAAGACTAACAGTGTATCAAATGGAATTTACTTATTTTCATCATGTGAACAAA----------CTACTCCAGAAAATTGGTATAAACACAGTACCCACTAAGCAAAAGAGAGGTTAGTCCAGAAAATGTCATGTGACTCTCCAA-C-CCCAGTTTCTTTCTTTTtttttttttttaaatttttatttatttatgatagtgagagagagagagaggcagagggagaagcaggctccatgcacccggagcccgatgtgggattcgatcccgggtctccaggatcacgccctgggccaaaggcaggcgccaaaccgctgcgccacccagggatcccATCCAACCCCAGTTTCTTCAAGGGTCCTCCCAGGTGCAAAGtaaggcaggtgctatgattgtc----------tccttttcagatagagaactgaggctgacaaaatttaTTATACTC-CTGGGTTAGGTCACCACCTGGGACTGAACCACTAT i canFam3.chr34 C 0 C 0 e papAnu2.chr6 1284984 1388 + 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=480560.000000 s hg38.chr3_KI270937v1_alt 128803 252 + 165607 TCTACAATGCCT---CTATTTTCCTTAAAATAAAGAGACTCTA--------AATGAAATTTATTCATTTTTACAAAG-GAAATAAAGTAGAAATTAGATTCCTACCCTGTGGCAACAATAGTATTCTTTGCTCTTATGCGATGGATGGACCCGTCCTGTATGCACAGTGCGAAGACACCACGGCACTCCCCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAACAGCTGGTATCATATCGCAGAGACTAAAAGAAA------ s ponAbe2.chr3 2453022 252 - 202140232 TCTACAATGCCT---CTATTTTCCTTAAAATAAACAAACTCTA--------AATGAAATTTATTCATTTTTACAAAG-GAAATAAAGTAGAAATTAGATTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTCATGCGATGGATGGACCCGTCCTCTATGCACAGTGCAATGACACCACGGCACTCCCCGTTCTCCATCAGAAGATCCAAGACAAAATACTCCACAAAACAGCTGGTATCACATCACAGAGACTAAAAGAAA------ i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319098 252 + 181584905 TCTACAATGCCT---CTATTTTCATTAAAATAAAGAAACTCTA--------AATGAAAGTTATTCATTTTTATAAAT-GAAATAAAGTAGAAATTAGAGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCGTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACCACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGGGACTAACAGAAA------ i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1286372 252 + 174439528 TCTACAATGCct---ctattttcattaaaataaagaaactctA--------AATGaaagttattcatttttataaat-gaaataaagtagaaattagaGTCCTACCCTGTGGCAACAACAGTGTTCTTTGCTCTTATGCGATGGATGGACCCGTCCTCTATGCACAGTGCGATGACACCACGGCACTCCCCGTCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCGTATCGCAGAgactaaaagaaa------ i papAnu2.chr6 I 1388 C 0 s chlSab2.chr4 1412513 252 + 91010382 TCTACAATGCCT---CCATTTTCATTAAAATAAAGAAACTCTA--------AATGACAGTTATTCATTTGTATAAAT-GAAATAAAGTAGAAATTAGAGTCCTACCCTGTGGCGACAACAGTGTTCTTTGCTCTTATGCGATGGACGGACCCGTCCTCTATGCACAGTGCGATGACACCACGGCACTCCCCATCCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTGTCATATCGCAGAGACTAAAAGAAA------ i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167367 251 + 204313951 TCTACAATGCCT---CTATTTTTATTAAAATAAAGAAACTCTA--------AATGAAATTGATTCATTTTTATAAAC-AAACTAAAATAAAAGTTA-ATTCCTACCCTGTAGCAACAACAGTGTTCTTTGCTCTTATGCGATGTATGGACCCATCTTCTATGCACAGTGCAATCACACCACGGCACTCCCCATTCTCCATCAGGAGATCCAAGGCAAAATACTCCACAAAATAGCTGGTATCATATCGCAGAGACTAAAAGAAA------ i calJac3.chr2 C 0 C 0 s mm10.chr13 74337300 249 + 120421639 ---------CCTGAACCACTTTAACAAAAAAGCAAACACTCCCACCCCCATACTGACACTCA---ATTTTTATATAA-GAAATTAAATACAA--TAAAAGCCTACCCAGTAGCAATAACAGTGTTTTTTGCTCTTATTCGGTGTATGGACCCATCTTCTATGCACAGTGCAATGACACCACGGCACTCCCCATTTTCCATCAGAAGATCCAGTGCAAAATATTCCACAAAATAACTGGTGTCATATCGCAGAGACTGTAAGAAA------ i mm10.chr13 C 0 I 39 s canFam3.chr34 11953421 246 + 42124431 TCCGTAGTGTTT---CCATTTTTATAAAAGGAA------------------ACTGAGACCCA---ACTTCCCTACACAGAAATTAAATACAAGTTAGACTCCTACCCGGTAGCCACAACAGTGTTCTTGGCTCTTATGCGATGGATGGACCCATCTTCTATGCACAGTGCAATAACACCACGACATTCTCCATTTTCCATCAAGAGATCCAAGGCAAAGTACTCTACAAAATAGCTGGTATCATATCGCAGAGACTAAAAAAACATGAAA i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=86219.000000 s hg38.chr3_KI270937v1_alt 129055 78 + 165607 GAAAAAAAAAGGGCAAG-AAGTGTTAAGCCAACCTTTAAGGTTTTAAGGTGATATC----------TGCTCATGTGAATAGGTGAAAGA s ponAbe2.chr3 2453274 78 - 202140232 GAAAAAAAAAGGGCAAG-AAGTGTTACGCCATCCTTTAAGGTTTTAAGGTGCCATC----------TGCTCATGTGAACAGGTGAAAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319350 78 + 181584905 GGAAAAAAAAGGGCAGG-AAGTGTTAAGCCAAACTTTAAGGTTTTAAGGTGGTATT----------TGCTCGTGTGAATAGGTGAAAGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1286624 78 + 174439528 ggaaaaaaaagggcagg-AAGTGTTAAGCCAACCTGTAAGGTTTTAAGGTGGTATT----------TGCTCGTGTGAATAGGTGAAAGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1412765 78 + 91010382 GGAAAACAAAGGGCAGG-AAGTGTTAAGCCAACCTGTAAGGTTTTAAGGTGGTATT----------TGCTCATGTGAATAGGTGAAAGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167618 74 + 204313951 G---AAAAAAGGGCAAGTAAGTGTTAAGCCAGCTTTCCAGG-TTTAAGGTGATAT-----------TGTTCATGTGAATAGGCAAAAGA i calJac3.chr2 C 0 C 0 s canFam3.chr34 11953667 80 + 42124431 GAAAAACAAGGATCCCA-CAGTTTCAATT--GCATTTAGGGTGTTAAACTGACATTTCAGCAATACTGCTCATGTGAACAGGC------ i canFam3.chr34 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=35263.000000 s hg38.chr3_KI270937v1_alt 129133 32 + 165607 ACTTGATC----------CAAATGGACCAGGTAAATCCAAGG s ponAbe2.chr3 2453352 32 - 202140232 ACTTGATC----------CAAATGAACCAGGTGAATCCAAGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319428 32 + 181584905 ACCTGATC----------CAAATGGACCAGGTAAATCCAAGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1286702 32 + 174439528 ACCTGATC----------CAAATGGACCAGGTAAATCCAAGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1412843 32 + 91010382 ACCTGATC----------CAAATGGACCAGGTAAATCCAAGG i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11953747 41 + 42124431 -CCTGATCTGGTGTGTAACAAATGGACTGTGTAAACCCTAGG i canFam3.chr34 C 0 I 151 e mm10.chr13 74337549 39 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=265545.000000 s hg38.chr3_KI270937v1_alt 129165 319 + 165607 AGATCAGCAACAGTGTCAATGACACTGTCAGAGCCCGAGAGGCATTCCACGCCCAGCAGTACCAACAAGGCAGGTGTGCTAGAGAACGCAGCAGCAACAGCTCCTATGTTGGTGACACATTTCCTACTTCTACACAACCCGAAGAGGCACTCCACACTGTCCGGTGGCCGCATGCAGCTCCACTCGGAGTCTGGTGCCAGAGTGAGATCCGCAGACCATGGGGTCACAGcccagatgggagctactggcaacacataaccacttaattaattaaaataagtcaaaacgttcagctcttcagctacacctgccacattag s ponAbe2.chr3 2453384 319 - 202140232 AGATCAGCAACAGTGTCAATGACACTGTCGGAGCCTGAGAGGCATTCCACGCCGAGCAGTACAAACAAGGCAGGTGTGCTACAGAACGCAGCAGCAACAGCTCCTATTTTGGTGACACATTTCCTATTTCTACACAACCCGAAGAGGCACTCCACACTGTCCGGTGGCCACATGTAGCTGCACTCAGAATCTGGTGCCAGAGTGAGGTCCACAGACCATGGGGTCACAGCCCAGatgggagctgctggcaacacataaccacttaattaattaaaataaatcaaaacgtttagctcttcagcgacaccagccacactag i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319460 318 + 181584905 AGATCAGCAACAGAGTCAAGGACGCTGTCAGCGCCCGAGAGGCGTTCCACACCGCGCAGCACAGACAAGGCAGGTGCGCTAGAGAACGCAGCAGCCACAGCTCCTACTTTGGTGACACGTTTCCTATTTCTACACAACCCGAAGAGGCACTCCACACTGTCTGGGGGCCACAGGCAGCTCCGCTCAGAGTTTGGTGCCAGAGTGAGGTCCACAGACCATGGGGTCACAGCCCAGGTGGGAGCTGCTGGCAACACACAACCACtaaattaattaaaataaatc-aaatgttcagctcttcagctacacctgccacattag i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1286734 318 + 174439528 AGATCAGCAACAGAGTCAAGGACGCTGTCAGCGCCCGAGAGGTGTTCCACACCGAGCAGCACAGACAAGGCAGGTGCGCTAGAGAACGCAGCAGCAACAGCTCCTACTTTGGTGACTTATTTCCTATTTCTACACAACCCGAAGAGGCACTCCACACTGTCCGGTGGCCACAGGCAGCTCCACTTAGAGTTTGGTGCCAGAGTGAGGTTCACAGACCATGGGGTCACAGCCCAGGTGGGAGCTGCTGGCAACACACAACCactacattaattaaaataaatc-aaacgTTCAGCTCTTCAGCTACACCTGCCACATTAg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1412875 318 + 91010382 AGATCAGCAACAGAGTCAAGGACGCTGTCAGCGCCCGAGAGGCGTTCCACACCGAGCAGCACAGACAAGGCAGGTGCGCTAGAGAACGCAGCAGCAACAGCTCCTACTTTGGTGACATGTTTCCTATTTCTACACAACCCGAAGAGGCACTCCACACTGTCCGGTGGCCACAGGCAGCTCCGCTCAGAGTTTGGTGCCAGAGTGAGGTCCACAGACCATGGGGTCACAGCCCAGGGGGGAGCTGCTGGCAACACACAACCACtaaattaattaaaataaatc-aaacgttcagctcttcagctacacctgccacattag i chlSab2.chr4 C 0 C 0 e mm10.chr13 74337549 39 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11953788 151 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=103779.000000 s hg38.chr3_KI270937v1_alt 129484 113 + 165607 caacagccccatgtggctgg--cagctaccaaagcggacggttgcagacgagcagattccggcac-cgcagaaaggtaggcgccggacagcgctgCCC-GCCTGGACCTGCCGTTCC s ponAbe2.chr3 2453703 113 - 202140232 caacagccccacgtggctgg--cagctaccaaagcagacggttgcagatgagcagattccggcag-cgcagaaaggtaggcatcggacagtgctgCCC-GCCTGGACCTGCTGTTCC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319778 113 + 181584905 caacagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcagattccagcac-tgcagaaaggtaggcactggacagcgctgCCC-GCCTGGACCTGCTGTTCC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287052 113 + 174439528 caacagccacatgtggctgg--caGCTCCCAACGCGGACGGTTGCAGACAAGCGGATTCCAGCAC-TGCAGAAAGGTAGGCACTGGACAGCGCTGCCC-ACCTGGACCTGCTGTTCC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413193 113 + 91010382 caacagccacatgtggctgg--cagctcccaacgcggacggttgcagacaagcagattccagcac-tgcagaaaggtaggcactggacagcgctgCCC-GCCTGGACCTGCTGTTCC i chlSab2.chr4 C 0 C 0 s mm10.chr13 74337588 116 + 120421639 CAACACCCCAGTATGGCCAGACTTGGGGCTGTAGTAGGCAG-TGCTGATAAGCCTATTTCCATACACATAGTAGAGTCAGCACTGGACAATGCTACCAGGGGTGGATTTGATAGTCC i mm10.chr13 I 39 C 0 e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11953788 151 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=198305.000000 s hg38.chr3_KI270937v1_alt 129597 201 + 165607 CT-CAGCCAGCGCAAGTCGCTCTCGTGAGCCTGGGCCAGCTCCCCACATGACAGCTCCTGCTCCGGAAGGAGCCGCCGTCTCCTCCCACCACACACTTGTCGATGCACTCAGCCACAGAGAAGTCACTGGTGTTCTAACAACCTGCACATTACTGATCCGTCCCCATGCATCAGAAAACAACAAAGCTCAGAACATGGATTA s ponAbe2.chr3 2453816 201 - 202140232 CT-CAGCCAGCGCAAGTTGCTCTCGTAAGCCTGGGCCAGCTCCCCACGTGACAGCTCCTGCTCCGGACAGAGCCACTGTCTCCTCCCACCACACACTTGTCGATGCACTCAGCCACACAGAAGTCACTGGTGTTCTAACAACCTGCAAATTAATGATCCGTCCCCATTCATCAGAAAACAACATAGTTCGGAATATTGATTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1319891 201 + 181584905 CT-CAGCCAGTGCAAGTTGCCCTCGTAAGCCTGGGCCAGCTCCCCACATGACAGCTCCTGCTCCGGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCAGCCACAGAGAAGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCTATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287165 201 + 174439528 CT-CAGCCGGTGCGAGTTGCCCTCGTTAGCCTGGGCCAGCTCCCCACAGGACAGCTCCTGCTCCAGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCAGCCACAGAGAAGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCCATTCATCAGAAAACAACAAAGTTCAGAATACTGAATA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413306 201 + 91010382 CT-CAGCCAGTGCGAGTTGCCCTCGTAAGCCTGGGCCAGTTCCCCACATGACAGCTCCTGCTCCAGACGGAGCTGCTTTCTCCTCCCACCACACACTCGTCCATGCACTCAGCCACAGAGAAGGCACTGGTGTTCTAACAACTTGCAAATTAATGGTCTGTCCCCATTCATCAGAAAACAACAAAGTTCAgaatactgaata i chlSab2.chr4 C 0 I 32 s mm10.chr13 74337704 181 + 120421639 TGATGGTTAATACAAGGAACTCTAAAGAGCATAGGCAAACTCTCAACACAA---------CCACAGAATAAGCA-------CAGACTGTCATATTTTTTTCAGTGTACTCAGCCTAAAGGAACCTACTGGTGCTCTAAT-ATTTTCATGTTAACCAGCTGTCACTAC-CTTCTGAAGACAG---AGCTCAGATTATTGATTA i mm10.chr13 C 0 I 240 s canFam3.chr34 11953939 172 + 42124431 CT-CAGTGAACACAAAGGACCCTCATGAAACT--GCCAGCTCCCCATGTGACACACAATTCCACAGGGTGGGCAG-------ATCCTGTCACATATCTGTCGATGCACGCAGCC--AGAGAAGCGACTCCTGTCCTAAC-ATTCGCTAATCAATAAT---------------GGAAATCAA--GAGTTCAGAATACTGATTA i canFam3.chr34 I 151 C 0 e calJac3.chr2 204167692 0 + 204313951 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=112853.000000 s hg38.chr3_KI270937v1_alt 129798 113 + 165607 CTCTGAATCAATACTGTTCAGGATATTGTTTGGTCATGCCAAAGTTGACCCTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAGTTAA-TATGAAAA s ponAbe2.chr3 2454017 111 - 202140232 CTCTGAATCAATACTGTTCAGAATATTATTTGGTCATGCCAAAGTGGACCCTGATTACCCAGGAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAA--GTTAA-TATTAAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320092 113 + 181584905 CTCTGAATCAATACTGTTCAGAATATTATTTGGCCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA-TATTAAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287366 113 + 174439528 CTCTGAATCAATACTGTtcagaatattatttggccatgcCAAAGTTGACCTTGATTACCCAATAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAAcaattaa-tattaaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413539 113 + 91010382 ctCTGAATCAATACTGTTCAGAATATTATTTGGTCATGCCAAAGTTGACCTTGATTACCCAGTAACTATTGTCACCTCAAGTCTTTGTCCAGTGATAACAATTAA-TATTAAAA i chlSab2.chr4 I 32 C 0 s canFam3.chr34 11954111 85 + 42124431 ----------------------------TTTGGCTACGCCAAAGTAGGCCCTGAGTATCCAGTAAGTACTGTC-CCCCAAGTGTTAGTCCAGTCTAAACAGTTAAGGATTAAAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74337885 240 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=253937.000000 s hg38.chr3_KI270937v1_alt 129911 307 + 165607 CAATCCATggccgggtgtggtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggactgcctgagctcaggagttcgggagcagcctgggcaacatgggaaaccctgtctctactaaaatacaaaacatcagcaaggcgtggcggcgtgcacctgtagtcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagcagagatcgcgccactgcactccagcctgggtga---gagtgagactccgtctcaaaaa----------caaagcaaaacaaaa s ponAbe2.chr3 2454128 309 - 202140232 CAATCCATggccgggtgtggtggctcatgcctataatcccagcacttcgggaggccgaggcgggtggactgcctgagctcaggagttcgggaccagccagggcaacatgggaaaccctgtctctactaaaacacaaaaaatcagcaaggcgtggcggcgtgcacctgtagtcccagctactctggaggctgaggcaggagaatcgcttgaacccgggaggcacaggttgcagtgagcagagatcgcaccactgcactccagcctcggtgac-agagtgagactctgtctcaaaaa----------caaagcaaaacaaaa i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320205 318 + 181584905 CAATCCATggctgggtgtggtggctcacacctctaatcctcgcactttgggaggccgaggcgggtagactgcctgagctcaggagttcgggaccagcctgggcaacatgggaaactctgtctctactaaaatacaaaaaattagccaggcatggtggcgtgcacttatagtcccagctactcaggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagcagagattgcaccactgcactccagcctg-gtgac-agagtgagagtccgtctcaaaaacaaagcaaagcaaaacaaaacaaaa i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287479 315 + 174439528 caatccatggctaggtgtggtggctcacacctctaatccccgcactttgggaggctgaggcgggtagactgcctgagctcaggagttcgggaccagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaattagccaggcatggtggcgtgcacttatagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggtggctgaggttgcagtgagcagagattgcaccactgcactccagcctgcgtgacaagagtgagactccatctcaaaaa-----caaagcaaaacaaaacaaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413652 315 + 91010382 CAATCCATggctgggggtggtggctcatgcctctaatccccgcactttgggaggctgaggcgggtggactgcctgagctcaggagttcgggaccagcctgggcaacatgggaaaccctgtctctactaaaatacaaaaaattagccaggcatggtggcgtgcacctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctaggtggctgaggttgcagtgagcagagattgcgccattgcactccagcctgcgtgacaagagtgagactccgtctcaaaaa-----caaagcaaaacaaaacaaaa i chlSab2.chr4 C 0 C 0 e mm10.chr13 74337885 240 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954196 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=8870.000000 s hg38.chr3_KI270937v1_alt 130218 9 + 165607 caaacaaaC s ponAbe2.chr3 2454437 9 - 202140232 caaacaaaC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320523 9 + 181584905 caaacaaac i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287794 9 + 174439528 caaacaaac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413967 9 + 91010382 caaacaaac i chlSab2.chr4 C 0 C 0 s mm10.chr13 74338125 9 + 120421639 CAAGATAAA i mm10.chr13 I 240 C 0 e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954196 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=61550.000000 s hg38.chr3_KI270937v1_alt 130227 47 + 165607 CAAACCAATCCATTCAGGAACTCAGAGG--TGGTAAAAGAGCCTTAAAA s ponAbe2.chr3 2454446 47 - 202140232 AAAACCAATCCATTCAGGAACTCAGAGG--TGGTAAAAGAGCCTTAAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320532 49 + 181584905 aaaacCAATCCATTCAGGAACTCAGAGGTTTGGTAAAAGAGCCTTAAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287803 47 + 174439528 aaaaccaacccaTTCAGGAACTCAGAGG--TGGTAAAACAGCcttaaaa i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1413976 47 + 91010382 aaaacCAACCCATTCAGGAACTCAGAGG--TGGTAAAACAGCCTTAAAA i chlSab2.chr4 C 0 C 0 s mm10.chr13 74338134 47 + 120421639 TACATCAATCAGTTCAGTAACTTAGAGG--TGATAAAAGCACATTAATA i mm10.chr13 C 0 C 0 s canFam3.chr34 11954196 43 + 42124431 CAAATCAATCAGTTCAGGAACTCAGAGG--TACT----GAGTCATAAAA i canFam3.chr34 C 0 C 0 e calJac3.chr2 204167692 0 + 204313951 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=8078.000000 s hg38.chr3_KI270937v1_alt 130274 12 + 165607 TACt---tgttcttt s ponAbe2.chr3 2454493 12 - 202140232 TACt---tgttcttt i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320581 12 + 181584905 TGCt---ttttttct i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287850 12 + 174439528 tact---tctttttc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414023 12 + 91010382 TACt---tctttttc i chlSab2.chr4 C 0 C 0 s mm10.chr13 74338181 15 + 120421639 Tacttagtgctcttt i mm10.chr13 C 0 I 216 e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954239 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=-1083.000000 s hg38.chr3_KI270937v1_alt 130286 3 + 165607 ---gtc s ponAbe2.chr3 2454505 3 - 202140232 ---ttc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320593 3 + 181584905 ttt--- i macFas5.chr6 C 0 I 313 e mm10.chr13 74338196 216 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954239 0 + 42124431 C e chlSab2.chr4 1414035 0 + 91010382 C e papAnu2.chr6 1287862 0 + 174439528 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=69559.000000 s hg38.chr3_KI270937v1_alt 130289 89 + 165607 tttttttgagaca-ggtctcctgttgctcaggctggagtgcagtggtatgaacatggctcactgt-------------------ctcaagtgatcctcctgcctcagcc s ponAbe2.chr3 2454508 84 - 202140232 tttttttgagaca-ggtctcctgttgcccaggctggagtgc-----tataaacacggctcacggt-------------------ctcaagtgatcctcctgactcagcc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1320909 107 + 181584905 tttttttgagacagggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcattgtagcctcaacc--tcctggtctcaagtgatcctcccacctcagcc i macFas5.chr6 I 313 C 0 s papAnu2.chr6 1287862 105 + 174439528 tttttttgagaca-ggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcactgt---ttCAAGTgatcctagtctcaagtgatcctcctgcctcagcc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414035 105 + 91010382 tttttttgagaca-ggtctcctgttgcccaggctggagtgcagtggtatgaacatggctcactgt---ttcaagtgatcctggtctcaagtgatcctcctgcctcagcc i chlSab2.chr4 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954239 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99060 20 - 103936 I a score=191256.000000 s hg38.chr3_KI270937v1_alt 130378 177 + 165607 tcctgagtaactgggattacaagcatgtaccaccatgctcagctactttttaaactttctgtagagacagggtctcactatgttctccagactggtctcaaacttctggtctcaagtgatcctcctgccttggcctcctaaagtgctgggattacagacgtgggccactgtgcctgg s panTro4.chr3_GL389630_random 99080 177 - 103936 tcctgagtaactggaattacaagcatgtaccaccatgctcagctactttttaaactttttgtagagacagggtctcgctatgttntccngnnnggtttcnnnnttnnggtntcaanngatcctcctgccttggcctcctaaagtgctgggattacagacgtgggccactgtgcctgg i panTro4.chr3_GL389630_random I 20 C 0 s ponAbe2.chr3 2454592 177 - 202140232 tcctgaggaactgggattacaagcatgtaccaccatgctcagctactttttaaactttttgtagagacagggtcttgctatgttctccagactggcctcaaacttctggtctcaagtgatcctcctgccttggcctcctaaactgctgggattacagacgtgggccactgtgcctgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321016 144 + 181584905 tcc----taactgggattacaagcatgtaccaccatgcccagctaatttttaaactttttgtagagacagggtcttgctatgttgtccaggctggtctcaaacttctggtctcaagtgatcctcct-ccttggcctccT----------------------------CTGTGCCTGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1287967 177 + 174439528 tcctgagtaactgggattacaagcatgtaccaccatgcccaactaatttttaaactttttgtacagacagggtctcgctatgttgtccacgctggtctcaaatctctggtctcaagtgatcctcctgccgtggcctcctaaagtgctgggattacatatgtgagccactgtgcctgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414140 177 + 91010382 tcctgagtaactgggattacaagcatgtaccaccatgcccagctaatttttaaactttctgtagagacagggtctctctatattgtccaggctggtctcaaacctctggtctcaagtgatcctcctgccgtggcctcctaaagtgctgggattacagatgtgagccactgtgcctgg i chlSab2.chr4 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e calJac3.chr2 204167692 0 + 204313951 C e canFam3.chr34 11954239 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=4200.000000 s hg38.chr3_KI270937v1_alt 130555 2 + 165607 cc s panTro4.chr3_GL389630_random 99257 2 - 103936 cc i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2454769 2 - 202140232 cc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321160 2 + 181584905 CC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288144 2 + 174439528 cc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414317 2 + 91010382 cc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167692 2 + 204313951 CC i calJac3.chr2 C 0 C 0 e mm10.chr13 74338196 216 + 120421639 I e canFam3.chr34 11954239 0 + 42124431 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=320629.000000 s hg38.chr3_KI270937v1_alt 130557 198 + 165607 TGCTTGCTCTGTTCTT-ACATGCTGAGTGTCACATATCCCAAGTG-AAAACCTGGTATATAAGATTATCAATTCAACTTCCCAACATAGAGGCAACAACTCACACATTGCCTTAGGGGCAGCTTCTCAAGGCAC----ACGCCTGCTCCTGTCACATCCACAGTCGCTGCATGTGCCCCA-CACGGCTGTTCTCTGTTGCTTTTT s panTro4.chr3_GL389630_random 99259 198 - 103936 TGCTTGCTCTGTTCTT-ACATGCTGAGTGTCACATATCCCAAGTG-AAAACCTGGTATATAAGATTATCAATTCAACTTTCCAACATAGAGGCAGCAACTCACACATTGCCTTAGGGGCAGCTTCTCAAGGCAC----ATGTCTGCTCCTGTCACATCCACAGTCGCTGCATGTGCCCCA-CACGGCTGTTCTCTGTTGCCTTTT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2454771 198 - 202140232 TGCCTGCTCTGTTCTT-ATATGCTGAGTGTCACATATCCCAAGTT-AAAACCTGGTATATAAGATTACCAATTCAACTTTCCAAAATAGATGCAAGAAGTCACACATTGCCTTAGGGGCAGCTCCTCAAGGCAC----ATGTCTAGTCCTGTCACATCAACAGTCGCTGCATGTGCCGCA-CATCGCTGTTCTCTGTTGCTTTCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321162 199 + 181584905 TGCTTGCTCGGTTCTG-ACATGTTGAGTGTCACATACCCCAAGTTAAAAATCTGGTATATAAGATTATCAATTCAACTTTCCAAAATAGATACAAGAAATAACATATTGCCTTAGGGACAGCTTCTCACAGCAC----ATGCCTGGTCCTTTCACATCAACAGTCGCTGCATGTGTCCTA-CACCGTTGTTCTCTGTTGCTTTTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288146 196 + 174439528 tgcttgcTCTGTTCTA-ATATTTTGAGTATCACATATCCCAAGTTAAAAACCTAGTATATAAGATTATCAATTCAACCTTccaaaatagata-aagaaataacATATAGCCTTAGGGACAGCTTCTCACAGCAC----ATGCCTGGTCCTTTCACATCAACAGTCGCTGCA--TGTCCTA-CACCATTGTTCTCTGTTGCTTTTT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414319 196 + 91010382 TGCTTGCTCTGTTCTA-ATATTTTGAGCATCACATATCCCAAGTTAAAAACCTAGCATATAAGATTATCAATTCAACTTTCCAAAATAGATA-AAGAAATAACATATTGCCTTAGGGACAGCTTCTCACAGCAC----ATGCCTGGTCCTTTCACATCAACAGTCGCTGCA--TGTCCTA-CACCGTTGTTCTCTGTTGCTTTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167694 192 + 204313951 TGCTTGTTCTGTCCT----ATGCTGAATGTCACATATTCCAAGTT-AGAACCTGGTATATAAGATTATCAATTCAACTTTCCAAAACAGATACAAGAAATAACGTATTGCCTTAGGGACAGCTCCTGACAGCAC------GCCTGGTACTCTCACATCAATAACC-CCGCGCATGTCTTA-CACAGTTGTTCTCTGTTGCTTTTT i calJac3.chr2 C 0 C 0 s mm10.chr13 74338412 185 + 120421639 TACTTTCTCTGTTCTTGGCATGTTATGCAGCACAAATTCAAAATA--------GTAAGAAATGATTACCAACTCAACTTTCCAATACAGACATAAGGAGTAACATACTGACTTAGAGACAGCTT-TCACAATAT----GTGTTCAATACTTTCAGATTAATAATTATTTCAGGTATCTTA-C------TATCtgtgttaattttt i mm10.chr13 I 216 I 440 s canFam3.chr34 11954239 185 + 42124431 TACTTTTTCTGTTCTT-ACACTTGCAGTGCAGCAGATCAC-CGTC-CAAACACGGTATA-ACGATTATCAATTTAATTTTCTAAAATAGGCACTTCTAAATTCATAATGAC-TACACACATCTTACCAAGTTACTGTGACCCCAGAGGCGGACACATTGACATTT--------TGACCTGTCCCCAGGGTGGCCTGTT------- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=161490.000000 s hg38.chr3_KI270937v1_alt 130755 96 + 165607 ACGCAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCACAAGCCCCAGCACTATGTGTCCTGTC-TCAGGTGGACGGGGGG s panTro4.chr3_GL389630_random 99457 96 - 103936 ACGCAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCACAAGCCCCAGCACTACGTGTCCTGTC-TCAGGTGGACGTAGGG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2454969 96 - 202140232 ACATAATCTCTGGTGGACTCACTGAGCACCCTAACCCATTCCCTGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGGTGGACCGGCGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321361 96 + 181584905 ACATAATCTCTGGCGGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGACCGGGGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288342 96 + 174439528 ACATAATCTCTGGCGGACTCACCGGGCATGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGACCGGGGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414515 96 + 91010382 ACATAATCTCTGGCGGACTCACTGGGCACGCTAACCCATTCCCCGCTGTCACCATAAGCCCCAGCACTACATGTCCTGTC-TCAGCTGGACCGGGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167886 96 + 204313951 ACATAATCTCTGGCTGACTCACTGGGCACGCTAACCCATTCCCCGTTGTCACCATAAGCCCTGGCACTACGGGTCCTATC-TCAGATGCACTGGAGG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11954424 63 + 42124431 --------TCCAACTTA-TCACCGCGCG-------------CCTGTCCTAACCAGA------------GTGTGTCCTGTCACCCTGTGCACCCAGGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74338597 440 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=766408.000000 s hg38.chr3_KI270937v1_alt 130851 298 + 165607 CAGCCTTACCCTCCCATATAAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCTGCCCTTTCCAAACTTGAGGCTGTGTCCGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCATAATTTTCTACCTGTGAAAGATAAAAACAAACAAAAGCCTTATTACCCTAAAGGAGTCAAGATATTCACAGCTAATCTACACTAAA---CAACTTTAATACAAATCTG---CAAA-CCCAAAT---------------TAACCTATTTTATGAAAAT s panTro4.chr3_GL389630_random 99553 298 - 103936 CGGCCTTACCCTCCCATATGAGGTGTGCAATATTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCTGCCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCATAATTTTCTACCTGTGAAAGATAAAAACAAACAAAAGCCTTATTACCCTAAAGGAGTCAAGATATTCACAGCTAATCTACACTAAA---CAACTTTAATACAAATCTG---CAAA-CCCAAAT---------------TAACCTATTTTATGAAAAT i panTro4.chr3_GL389630_random C 0 I 1126 s ponAbe2.chr3 2455065 298 - 202140232 TGGCCTTACCCTCCCATATAAGGTGTGCAATATTGAGTGGCCGGTCCGGTCAGCCACACAGCAGCACCGATGAGCCTGCCCGCCCTTTCCAAACCTGAGGCTCTGTCCACCAAATGCATGCTGATAAATCTTCCCATCTTCAGTGCTGTTAAACGGCATGGCACAATTTTCTAGCTCTGAAAGATAAAAACAAACAAAAATCTTATTACCTTAAAGGACTCAAGATATTCACAGCTAATCTACACTAAA---CAACTTTAATACAAATCTG---CAAA-CCTGAAG---------------TAACCTATTTTATGAATAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321457 298 + 181584905 CGGCCTTACCCTTCCATATAAGGTGTGCAATAGTGAGTGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCGTAATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTCAAGATATTCATAGCTCATCTACACTGAA---CAACTTTAACACAAATCTG---CAAA-CCCAAAG---------------TAACCTATTTTATGAAAAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288438 298 + 174439528 CGGCCTTACCCTTCCATATAAGGTGTGCAATAGTGAGGGGCCGGTCCGATCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAACGGCATGCCATAATTTTCCAGCTgtgaaagataaaaacaaacaaaaaccttattaCCTTAAAGGAGTCAAGATATTCATAGCTCATCTACACTGAA---CAACTTTAACACAAATCTG---CAAA-CCCAAAG---------------TAACCTATTTTATGAAAAT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414611 298 + 91010382 CGGCCTTACCCTTCCATATAAGGTGTGCAATAGTGAGGGGCCAGTCTGATCAGCCACATAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAATGGCATGCCGTAATTTTCCAGCTGTGAAAGATAAAAACAAACAAAAACCTTATTACCTTAAAGGAGTCAAGATATTCATAGCTCATCTACACTGAA---CAACTTTAACACAAATCTG---CAAA-CCCAAAG---------------TAACCTATTTTATGAAAAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204167982 282 + 204313951 CGGCCTTACCCTTCCATATAAGGTGTGCAGTAGCGAGTGGCCAGTCCGATCAGCCACGCAGCAGCACCGATGGGCCTGCCCGCCCTTTCCAAACTTGAGGCTCTGTCCACCAAACGCACGCTGATAAATCTTCCCATCTTGGGTTCTGCTAAACGGCATGCCATAATTTTCTAGCTGTGAAACATAAAAACG-----------TATTACCTTAAAGCAGTCACGATATTCACAGCTAACCTA-----AA---CAGCTTTCACACAAACCTG---CAAA-CCCAAAG---------------TCATGTATTTTATGAAAAT i calJac3.chr2 C 0 C 0 s mm10.chr13 74339037 314 + 120421639 CAGCCTTACTCTTCCATACAACGTGTGTAAGAGTGAGTGGCCTGTCCGATCAGCCACACAGCAACACCGATGAGCCTGCCCGCCTTTCCCAAACTTGAGGCTCTGTCCACCAAATGCACGCTGATAAATCTTCCCATCTTCAGTTCTGCTAAATGGCATACCATAATTTTCTAGCTGTGAAACAC-AAAACAAGCAAAAATA-TATTATCTTAAACAAGTAAAAA---ACAAAACAAACAAACAAAAAACCTCATTTTTGTACCAAATTTGCACCAAA-CCCAAAACCTAAACTTCAATACTAGCATATTCTATGAAAAC i mm10.chr13 I 440 C 0 s canFam3.chr34 11954487 293 + 42124431 TGGCCTCACCCTTCCATACAACGTGTGCAGCAGCGAGTGGCCAGTGCGGTCAGCCACACAGCAGCACCGATGGGCCTGCCCGCCTTTCCCAAACTTGAGGCTCTGTCCACCAAAAGCACGCTGATAGATCCTTCCATCTTCAGTTCTGCTAAATGGCATGCCATAATTCTCCAGCTGTGAAATACAAAAACAAACA-----CCTAGCACCTGGAAGGAATCAAGACTTTCATGGCGACTTTACAGT-AA---CAATTTCAACATAAGCCTG---CGAACCCCAAAC---------------CAATATGTCCTATAAAAAT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1161.000000 s hg38.chr3_KI270937v1_alt 131149 2 + 165607 GT s ponAbe2.chr3 2455363 2 - 202140232 GT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321755 2 + 181584905 GT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288736 2 + 174439528 GT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414909 2 + 91010382 GT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204168264 2 + 204313951 CT i calJac3.chr2 C 0 C 0 s mm10.chr13 74339351 2 + 120421639 AC i mm10.chr13 C 0 C 0 s canFam3.chr34 11954780 2 + 42124431 CT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3_GL389630_random 99851 1126 - 103936 I a score=1448772.000000 s hg38.chr3_KI270937v1_alt 131151 695 + 165607 CAACACTTCATCAAAGAGAAG-TTTTTCTTATTACATGTAATACATAGTTCATGATGGACAAAGACTTCTCTTGTGAGCTTTGCTAATCAC-----------------------------------------CATTCTTTCGGCT-GCCACATCTGCCTCAACTGCTTACATTTTTTCCAGGACTCTTGT--ACTGGAAACAGACCACCAGAGCACCCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCACGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCATAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCAACCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG---GATTCAGAGAAAGCCAGCTACTCACATGGTGACTCCCAGTGAGGG--CTGACCTCAGCAGAGGAGCAGCCAGGCCTGACAGATTCCAGATCACAACCCCTCCCA-GACTCACCCAGTGATTCCAtcccttagcctcagtctcctcatctgtgtggtggagacagagggaactccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggcacagaaaaggtactccatgaatCTCTCC-GCATAATTTTAT s panTro4.chr3_GL389630_random 100977 695 - 103936 TAACACTTCATCAAAGAGAAG-TTTTTCTTATTACATGTAATACATACTTCATGACGGACAAAGACTTCTCTTGTGAGCTTTGCTAATCAC-----------------------------------------CATTCTTTCGGCT-GCCACATCTGCCTCAATTGCTTACATTTTTTCCAGGACTCTTGT--ACTAGAAACAGACCACGAGAGCACCCAGAGCCTCCCGCCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCACGTAGTGGATGGCATCCTGGTCCCCCAACCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG---GATTCAGAGAAAGCCAACTACTCACACGGTGACTCCCAGTGAGGG--CTGACCTCAGCAGAGGAGCAGCCAGGCCTGACAGATTCCAGATCACAACCCCTCCCA-GACTCACCCAGTGATTCCAtcccttagcctcagtctcctcatctgtgtggtggagacagagggaactccagg-----aagggctgactggagcagtgagtgaaaggctacctgtaatatgcttattacctaacgtatctggcacagaaaaggtactccatgaatCTCTCC-ACATAATTTTAT i panTro4.chr3_GL389630_random I 1126 C 0 s ponAbe2.chr3 2455365 695 - 202140232 CAACACTTCATCAAAGAGAAG-TTTTTCTTGTTACATGTAATGCATAGTTCATGACAGACAAAGACTTCTCTTGTGAGCTTTGCTCATCAC-----------------------------------------CATTCTTTCGGCT-GCCACATCTGCCTCCATTGCTTACATTTTTTCCAGGACTCTTGT--ACTAGAAACAGACCACGAGAGCACCCACAGCCTCCCACCCATCACCTCGACCATGGCAGTGGGGGCCTGCTCCGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTAGTCCCCCTCCATGTTCCCCAGAGCAGCATTGATTCCAACCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCAACTTTGTCTTCCAGGCCCAAATCCACCCGCTGGGG---GACTCAGAGAAAGCCAACTACTCACGCAGTGACTCCCAGTGAGGG--CTGACCTCAGCAGAGGAGCAGCGAGGCCTGACAGATTCCAGATCACAACCCCTTCCC-AGCTCACCCAGTGATTCCAtcccttagcctcagtctcctcatctgtgtggtggagacagagggagctccagg-----aagggctgactggagcagtgagtgagaggctacctgtaatatgcttattacctaacatatctggcacagaaaaggtactccacaaatCTTTCC-GGATAATTTCAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1321757 697 + 181584905 CAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGACGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC-----------------------------------------CATTCTTTCGGCCGGCCACATCTGCCTCAATTGCTTACATGCTTTCCAGGACTCTTTTTGACTAGAAACAGACCACGAGGGCGCCCAGAGCCTCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCAGCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG---GATTCAGAGAAAGCCAACTCCTCACACGGTGACTCCCAGTGAGGG--CTGACCTCAGCAGAGGAGCAGCGAGGCCCCACAGATTCTGGGTCACGACCCTCCCCT-GACTCGCCCGGTGATTCAAtcccttagcctcagtctcctcatctgtgtggtggagacagagggaactccagg-----aagggctgactggagccgtgagtgacaggctacctgtaatatgcttattacctaacatatctggcacagaaaaggtactcaacaaatCTTTCC-AGATAATGTTAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1288738 697 + 174439528 CAACACTTCATCAAAGAGAAG--TCTTCTTGTTACATGTAATGCATAGTTCGTGACGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC-----------------------------------------CATTCTTTCGGCCGGCCACATCTGCCTCAATTGCTTACATGCTTTCCAGGACTCTTTTTGACTAGGAACAGACCACGAGGGCGCCCAGAGCCCCCCGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGTCAGTCGGAGCCCTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCTCCAGAGCAGCATTGATTCCTCCCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCACCTTTGTCTTCCAGGCCCAAATCCACCCACTGGGG---GATTCAGAGAAAGCCAACTCCTCACGCAGTGACTCCCAGTGAGGg--ctgacctcagcagaggagcaGTGAGGCCCGACAGATTCCGGGTCACGACCCTCCCCT-GACTCGCCCGGTGATTCAATCCCttagcctcagtctcctcagctGTGTGGTGGAGACAGAGGGAACTCCAGG-----AAGGGCTGACTGGAGCCGTGAGTGACAGGCTACCTGTAATATGCTTGTTACCTAACATATCTGGCACAgaaaaggtactcaacaaatCTTTCC-AGATAATGTTAA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1414911 697 + 91010382 CAACACTTCATCAAAGAGAAG--TCTTCTTGTTACGTGTAATGCACAGTTCGTGATGGAAAAAGACTCCTCTTGTGAGCTTTGCTCATCAC-----------------------------------------CATTCTTTCGGCCGGCCACATCTGCCTCAATTGCTTACATTCTTTCCAGTACTCTTTTTGGCTAGAAACAGGCCACGAGGGCGCCCAGAGCCCCCTGCCCATCACCTCGACCACGGCGGCGGGAGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGTCAGTCGGAGCCCTTCATAGTGTCATAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCGTTGATTCCTCCCTG----GAAACACCA-ACCACTCCTTACAAGCCACAAACAGGAGCCCCAGCTTTGTCTTCCAGGTCCAAATCCACCCACTGGGG---GATTCAGAGAAAGCCAACTCCTCACGCAGTGACTCCCAGTGAGGG--CTGACCTCAGCAGAGGAGCAGCGAGGCCCGACAGATTCCGGGTCACGACCCTCCCCC-GACTCGCCCGGTGATTCAAtcccttagcctcagtctcctcagctgtgtggtggagacagagggaactccagg-----aagggctgactggagcagtgagtgacaggctacctgtaatatgcttattacctaacatatctggcacagaaaaggtactcaacaaatCTTTCC-AGATAATGTTAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204168266 692 + 204313951 CAACCCTTCATCAGAGAG-----TTTTCCTGTTACATGTACTGCATCGCTCATGACGGAAAAAGA-TTCTCTTGTGAGCTTGACTCATCAC-----------------------------------------TGTTCTTTTGGCTGGCCACATCTGCCTCAATCTCTTACATTTTCTCCAGGACTCTTTTGTACTCGAAACAGACCACGAAAGCACCCACAGCCTCCCACTCATCACCTCGACCACGGCGGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCATCCTGGTCCCCCAGCCAGTCGGAGCCTTTCACGGTGTCGTAGAAATGCCACCTCCAGTTGTCCTCCTCCATGTTCCCCAGAGCAGCATTGATTCCTCCCTG----GTAACAACA-ACCACTCCTTACAAACCACAAACAGGAGCCCCAACTTTGTCTTCCAGGCCCAAATCCACCCACC-AGG---GATTCAGAGAAAGCCA-CTCCTCATGCAGTGACTCCCAGGGAGAG--CTGCCCTCAGCAGAGGGGCAGCAAGGCCGGGCAGATTCCAGATCACAACCCCTCCCCTGACTCGCCCagtgattcactcccttagcctcagtctcatcatctgtgtggtggagacagagggaactctagg-----aagggctgattggagcagtgagcaaaaggctacctgtgatatgcttattacctaacacacctggcacagaaaaggtactcaacaaatctttcc-agataattttat i calJac3.chr2 C 0 C 0 s mm10.chr13 74339353 667 + 120421639 TGATAATTCCGGGAGAATAAA--CTATCTTCTTAAATGAACTGAATAGTT----ACAGGAAAA-ACTTTCCTCA-----TTGGCTCATCATTACCAGGGATGGGACCCTAGAGCTCAATTGCAGTAGGCATGCATTCTCCAGGA--GCCTTATC--CCCAGCCCGTTTTTATTTTTACACTGATTCTTTTGTAATACAAGCAGAGCACATACACA---AGAGTTTCCCGTCAGTTACCTCAACCACAGAGGCAGGAGCTTGCTCTGTCATGTAATGGATGGCATCCTGATCCCCCAGCCAGTCGGAGCCTTTCACAGTGTCATAGAAATGCCATCTCCAGTTGTCCTCTTCCATGTTCCCCAGAGCAGCATTGATACCTCCCTG----GAAATACCATACAACTGCTTACATATCTTAA---------------CAGTCTCTGCAGCCCA---CCTCCCCCTCAGATCTGATTCAGGGACAGCAAACTCCGTATGTGGTGACTCTTCATGAGGG--TT----------AAGGAGCTGTAAGGCAGGACAGATTCCAAGTCATGAGACTTCCC--GAGTAGACAGATGGCTTAATTC----------------TTATTTGTAATGGGAATGTTACTTGATCTCCAGGCCTGTAAAGACTA---------------GAAAAGATCCTTGTAACTTAGCCATTGTTTATC-TACCTAACA-ACTGAAGATGTTCAACAAATCTATCT-GGA-AATTTTAT i mm10.chr13 C 0 I 3094 s canFam3.chr34 11954782 586 + 42124431 CAACACTTCAGAAAAGAGAAAAACTTTGTCATTAAATGAACTGAATGGTTGACAATAGAAAGGG--TCTCCCTGTTGCACCCTCTCAT-AC-----------------------------------------CCTTCTTTGGGCTGACCACATCTGCCTCAAAACCT----------------CTCTTGT--GTCAGAAACAGACCATGCGTGGA----------------CACTACCTCTACCACAGAAGCAGGGGCCTGCTCTGTCATGTAGTGGATGGCGTCCTGGTCCCCCAGCCAGTCGGAGCCCTTCACGGTGTCGTAGAAGTGCCACCTCCAGTTGTCCTCCTCCATGTTGCCCAGAGCAGCATTGATTCCTCCCTGCAAAGAGACAGCA-AC-----CTTACAAGCTACAAGGAGAGGCCCCAGTGGTATCTTCTAGGCTCA-----TCCCAGAACTG---GGTTCAGAAAAAAACAAATGCTTTCAACCTAACTGTCTGTAAGGGACCTGACTGCAGTAGGGGTACAG-------------------------------------Gacc---------------tccctcagcctcagtcctcccacctaagaagggacaagaagcccaactccaga---------gctaactggag------------ggtt-----cacaatgctcatcacttccca-acctggcacataacaggtactcaacaaatctgtctgggatCATTTTAT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=105544.000000 s hg38.chr3_KI270937v1_alt 131846 53 + 165607 TAACA-AATCTTCCCAACGGCATTTACGGGCATGTGTTAAAGATTAGAAGTGCT s panTro4.chr3_GL389630_random 101672 53 - 103936 TAACA-AATCTTCCCAACGGCATTTACGGGCATGTGTTAAAGATTAGAAGTGCT i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2456060 53 - 202140232 TAACA-AATCTTCCCAACGGCATTTACGGGCATGTGTTAAAGATTACAAGTGCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1322454 53 + 181584905 TAACA-AATCTTCCCAATGGCATTTACGGACATGATTTAAAGACCAGAAGTGCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1289435 53 + 174439528 CAACA-AATCTTCCCAATGGCATTTACGGGCGTGATTTAAAGACCAGAAGTGCT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1415608 53 + 91010382 TAACA-AATCTTCCCAATGGCATTTACGGGCGTGAGTTAAAGACCAGAAGTGCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204168958 53 + 204313951 taACA-AACCTCCCTAAAGGCATTTACAGGCATGTGTTAAAGACTAGAAGTGCT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11955368 53 + 42124431 -GACAGAATGTTGCTACTGGTATTTACAGGCATGTGTTACAGACAAGAAGTGCT i canFam3.chr34 C 0 I 1308 e mm10.chr13 74340020 3094 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=360328.000000 s hg38.chr3_KI270937v1_alt 131899 216 + 165607 TCCTGCCAAGTAATAAACTCCATACTC-AGAGTCGCACTCCCCTGTACCCCTACTTCCTTTGGCTGTGTGTGCCCACCACCGTCTTACCCCTCAGAGAGTCCCAGAAGACAGCAGCACCAGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGAATCCTCCTCTTTAGATGATCTCCTTTTCTTAAGGTGTTGGGGT------------------GGCAGGG s panTro4.chr3_GL389630_random 101725 215 - 103936 TCCTGCCAAGTAATAAACTCCACACTC-AGAGTCGCACTCCCCTGTACCCCTACTTCCTTTGGCTATGTGTGCCCACCACCGTCTTACCCCTCAGAGAGTCGCAGAAGACAGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGAATCCTCCTCTTTAGATGATCTCCTTTTCTTAAGGTGTTGGGGT------------------GGCAGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2456113 233 - 202140232 TCCTGCCAAGTAATAAACTCCATACTC-AGAGTCACACTCCCTTGTACCCCTACTTCCTTTGGTTGTGTGTGCCCATTGCCATCTTACCCCTCAGAGAGTCCCAGAAGACAGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAGCCTAACTTCTGATTCCTCCTTTTTAGATGATCTCCTTTCCTCAAGGTGTTGGGGCAGCCGGGGTGGGTGGGGAGGCAGGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1322507 215 + 181584905 TCCTGCCAAGTAATAAGCTCCACACTC-AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCACCACCGTCTTACTCCTCAGAGAGTCCCAGAGGACAGCAGCAC-GGGGACAAATAAAATCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGATTCCTCCTCTTTAGATGATCTCCTTTTCTTAAGGTGTTGGGGC------------------GGTGGGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1289488 215 + 174439528 TCCTGCCAAGTAATAAGCTCCACACTA-AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCACCACCGTCTTACTCCTCAGAGAGTCCCAGAAGACAGCAGCAC-GGGGACAAATAAAACCCTTGCCCTTTCCTTCCCCACCCTAAATTCTGACTCCTCCTCTTTAGATGATCTCCTTTTCTTAAGGTGTtggggc------------------ggtgggg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1415661 215 + 91010382 TCCTGCCAAGTAATAAGCTCCACACTC-AGAGTCGCACTCCCCTGTACCCCTGCTTCCTTTGGCTGTGTGTGCCCACCACCGTCTTATTCCTCAGAGAGTTCCAGAAGACAGCAGTAC-AGGGACAAATAAAACCCTTGCCCTTTCCTTCCCTACCCTAAATTCTGATTCTTCCTCTTTAGATGATCTCCTTTTCTTAAGGTGTTGGGGC------------------GGTGGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204169011 215 + 204313951 TCCTGCCCAGAAATAAACTCCACACTCAAGAGTCACACTTCCCGGCACCCCCTC-TCCTTCGGCTGTTTGTGGCCACCACCATTTCACCCCTCAGAGAGTCCCAGAGGATGGCAGCAC-AGGGACAAATGAAACCCTTGCCCTTTTCTTCCCCAACCTAAATTCTGATTACTCCTCTTTAGATGATCTCCTTTTCTTACGGTGTTGGGGA------------------GGTGAGG i calJac3.chr2 C 0 C 0 e mm10.chr13 74340020 3094 + 120421639 I e canFam3.chr34 11955421 1308 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=15750.000000 s hg38.chr3_KI270937v1_alt 132115 7 + 165607 GTGGGTG s panTro4.chr3_GL389630_random 101940 7 - 103936 GTGGGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2456346 7 - 202140232 GTGGGTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1322722 7 + 181584905 GTGGGTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1289703 7 + 174439528 gtgggtg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1415876 7 + 91010382 GTGGCTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204169226 7 + 204313951 GTGGGTG i calJac3.chr2 C 0 C 0 s canFam3.chr34 11956729 7 + 42124431 GTGGGCA i canFam3.chr34 I 1308 C 0 e mm10.chr13 74340020 3094 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1221111.000000 s hg38.chr3_KI270937v1_alt 132122 610 + 165607 ---GGGAGGGT---------------------------------------------------------------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCCCAGGGAAGAGGC--TCCAGGGAGAGAC-CCCTGAATGGGTGAGC------TGAGTAAGGCACAgcaagaggcca-----agtggctgga---gcacagggaggaggcaggaggcTGCCCAGGTAGAAAGTGCGAGGCTGCGCGGGACCTGCACGGAGTGGGAGCACAGTGGGGCACCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATCAAACTCTGCCTCGGAAAGGCCAAATGCAGCTCGCAAAGCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATTCACCTGTCAAGCACAGGTTCCACTATGCCAAACATGAAGACTCTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAAGGAGCAACTGCTGGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCTGAACAGTGCAGGGA--GAAGTA-GGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG s panTro4.chr3_GL389630_random 101947 602 - 103936 ---GGGAGGGT---------------------------------------------------------------AGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTGAATTAAGAGTGACAACAAGGCTCCCGCCCTTCAAAGTCCCCAGGGAAGAGGC--TCCAGGGAGAGAC-CCCTGAATGGGTGAGC------TGAATAAGGCACAGCAAGAGGCCA-----AGTGGCTGGA---GCACGGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGTGCGAGGCTGTGCGGGACCTGCACGGAGTGGGAGCACAGTGGGGCACCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTGGTAACACATGCTGTATCAAACTCTGCCTCGGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCTTCTAGCGCCTACCATCACTGCATCAAATTCATGATCCACTACTG-------AGCAGAAATCTGGGAAAGAAAAATTCACCTGTCAATCACACGTTCCACTATGCCAAACATGAAGACTCTTGTGCCAGTGAAAGAGCTT----------GACAAAGATA-AAAGGAGCAACTGCTGGGCATA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCTGAACAGTGCGGGGA--GAAGTA-GGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2456353 676 - 202140232 ---GGGAGGGTACCAGGCGAGATGGTCAGAGAAGGTGTTGGGGAAGGAGGGGTGGGTGGGGAGGGTAGCAGGCGAGATGGTCAGAGAAAACCCAAGTGTGACTGGAGTCTCAATTAAGACCGACAACAAGTCTCCCGCCCTTCAAAGTCCTCAGGGAAGAGGC--TCCAGGGAGAGAC-CCCTGAGAGGGTGAGCTG--AGTGAGTAAGGCACAGCAAGAGGCCA-----TGTGGCTGGA---GCACGGGGAGGAGGCAGGAGGCTGCCCAGGTAGAAAGTGTGAGGCTGTGCAGGACCTGCACGGAGTGGGAGCACAGTGGGGCACCTTTCTCTTACCTGCGCTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCCGTATTAAACCCTGCCTCGGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCGCTGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATTCACCTGTCAATCACATGTTCCACTATGACAAACATGAAGACTCTTGTGACAGTGAAAGAGCTT----------GACAAAGATA-AAACAAGCAACTGCTGGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCTGAACAGTGCGGGGA--GAAGTG-GGCACATTC------GCACCTGGAG--------------------------------------------AAGGGACTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1322729 621 + 181584905 ---GGGAGGGA-------------------------------------------------------AGTAGGCGAGATGGTCAAAGAAAACCCGAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTCCAGGGAAGAGGC--TCCAGGGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAgcaagaggcca-----tgtggctgga---gcatggggaggaggcaggaggcTGCCCAGGTAGAAAGCGCAAGGCTGTGCGGGACCTGCACAGAGTGGGAGCACGGTGGGGCACCTTTCTCTTACCTGTGCCGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATGAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACCGCATCAAATTCATGATCCACTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAACGCACCTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAAGGAGCTT----------GACAAAGACA-AAAGGACCAACTGCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCTGAACAGTGCAGGGA--GAGGTG-GGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1289710 618 + 174439528 ---gggagggt-------------------------------------------------------agTAGGCGAGAAGGTCAAAGAAAACCCGAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTCCAGGGAAGAGGC--TCCAGGGAAAGA--CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAGCAAGAGGCCA-----TGTGGCTGGA---GcatggggaggaggcaggaggctgcCCAGGTAGAAAGCGCAAGGCTGTGCGGGACCTGCACAGAGTGGGAGCACGGTGGGGCACCTTTCTCTTACCTGCGCCGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGCTGTATTAAATCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCACTACTGGATACTGAgcagaaatctggaaaagaaaaatgcaccTGTCAATCACGTGCTCCACTATGCCAACCACGAAGACTCTTGTTACAGTGAAGG-GCTT----------GACAAAGACA-AAAGGACCAACTGCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCCGAACAGTGCGGGGA--GAGGTG-GGCACA-TC------GCACGTGGAG--------------------------------------------AAGGGACTG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1415883 620 + 91010382 ---GGGAGGGT-------------------------------------------------------AGTAGGCGAGAAGGTCAAAGAAAACCCAAGTGTGACTGGAGTCCCAACTAGGAGTGACAACAAGGCTCCAGCCCTTCCAAGTCTCCAGGGAAGAGGC--TCCAGGGAAAGAC-CGCTGAGAGGGTGAGCTG--AGTGAGCAAGGCACAgcaagaggtca-----tgtggctgga---gcatggggaggaggcaggaggcTGCCCAGGTAGAAAGCGCAAGGCTGGGCGGGACCTGCGCAGAGT-GGAGCACGGTGGGGCACCTTTCTCTTACCTGCACTGCAACAGTGTGTGACCTGGTAGGAAACAGCTTTGTAACACATGTGGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGATCCGCTACTGGATACTGAGCAGAAATCTGGAAAAGAAAAATGCACCTGTCAATCACGTGCTCCACTATGCCAAACACGAAGACTCTTGTTACAGTGAAGGAGCCT----------GACAAAGACA-AAAGGAGCAAATGCTAGGCACA-----CA-GGGCCTCCATCCTGTCCTGGGGCTGAG--------CCCTGAACAGTGCAGGGA--GAAGTG-GGCACATTC------GCACGTGGAG--------------------------------------------AAGGGACTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204169233 616 + 204313951 ---GGGAGGGT-------------------------------------------------------AGTAGGCGAGATGGTCAGAGAAAACCCAGCTGTGACTGAAGTTCCAATTAAGAGTGACAGCAAGGCTCCAGCTCTTCAAAGTCCCCATGGAAGAGGC--TCCAGGCAAAAAC-CCCTGAGAGG--GAGCTG--AGAGAGCAATGCACAGCAAGAGGCCA-----TGTGGCTGAA---GCATGGGGAGGAGGCAGGAGGCCGCCCGGGTGGAAGGCGCAAGGCTGGGCA-GACATGCAGGCAGTGAGAGCGTGGCGGGGCACCTTTCTCTTACCTGGGCTGCAACAGTGTGTGACCTGGTGGGAAACAGCTTGGTAACACATGCTGTATTAAACCCTGCCTCAGAAAGCCCAAACGCAGCTCGCAG-GCCTGCCCCTCCAGCGCCCACCACCACGGCATCAAATTCATGGTCCACTACTGGATACTGAGCAGAAATCTGGAAAATAAAAATTCACCTGCCAATCGCATATTCCACTATGCCAAACACGAAGACTATGGTT--AGTTCAAGAGCTT----------GAAAAGGATA-AAAGGAGCAACTGCTAGGCCCA-----CA-AGGCCTCCATCCTGTCCCGGGGCTGAG--------CACTGAACAGTGCGGGAA--GAGGTG-GGCACGTCC------ACACGTGGAG--------------------------------------------AAGGGACTG i calJac3.chr2 C 0 C 0 s mm10.chr13 74343114 554 + 120421639 ---GGCAGGAC---------------------------------------------------------------AGCTGG---GAAAAGACCCATGTATGA----------------AAATAACAATGAGGTGCCAATCCCACAATGGTCCCGAGGTAGAGAT--TACCAGCAGTGA----CTTGGAAAGTGAG-----AATGAATGATGAACTG---GATGCCAACAACTGTGGCTGAA---GCTTAATAAGAAGACTTTGTATT------ATAGGAGAGGTGGTGCTGTACAAGATCTGT------TGGTATCAAAAGAGGG--CCTTTTTCTTACCTGTGCTGCAACAGTATGTGATCGGGTAGGAAAGAGCTTTGTAAGGCATGCAGTATTAAACCCTGCCTCAGAAAGGCCAAATGCAGCTCGCAA-GCCTGCCCCTCCAGCGCCTACAACCACAGCATCAAATTCATGATCCACCACTGGGTATTGAGTAGAAATCTGAAAAGG--AAATTCAGCTATTTGTTACATATTTAACTTCATAAAACATCAAGACTATAATTACAA---------------------AATAATCACAGGAAAGAATAGCTGCTGTGCACAGAAAGAA-GGCTTTCAATCCTGTTCT-GATCTGAG-----------TGTGCATTCTTGGTGTTGAAGTGTGGTACA----------------------------------------------------------------ATGAACCA i mm10.chr13 I 3094 C 0 s canFam3.chr34 11956736 646 + 42124431 GGGGGCAAGGT---------------------------------------------------------------GGGTGCTCAGAGAAGACCTGAGTGTAACTGGAG--CAGAGAAGAGGTGA----GAGGCTCCAGAGCGGCTCTAGCATGGGACTGGAGGCAGTACACGCACAGACACCCAAGGTGAGTGAGCTGACAGGGTGCAAGGAGCAAAAGGAGACAAA----TGTGGCTGTACTGTTGTGGGAAGGAGGCTTGTGGCA------GGAGACTGCGCCCTGCTGTGCAGGTTC--CAAACCACTAAACCAC---------CCTTTCTCTTACCTGGGCGGCAACGGTGTGTGATCTGGTGGGAAAGAGCTTTGTGACGCAGGCCGTGTTAAACCCAGCCTCTGAAAGGCCAAATGCAGCTCGCAA-GCCCGCCCCTCCAGCGCCTACCACCACTGCATCAAATTCATGGTCCACCACTGGGTACTGCGTAGAGATCTGGAAAGGAACAATTCACCTGTCAGCCA-----------------------GGGACTATGGGTGCAGCGGCAGAGTTCAGGCACAACGGAAAGAGGCACAAAAGAGCAGCTGC--GGCAAA-----CAGGGGCCTCCACCCGGCGTATGTGGTGAGGGCAGCCCACCCCAACAGGCCTGCCA--AAGG-G-ACCACACTCATCCCGGCACCTGGAAAGCCCCCCAAGAGCTGAAATGCTGAAGAGGTACAGCCTCAAAGCAAGGAACTG i canFam3.chr34 C 0 I 246 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=73293.000000 s hg38.chr3_KI270937v1_alt 132732 37 + 165607 ATAATCAGATTCTATGAATGGTAGAGGG--TCTATTCCA s panTro4.chr3_GL389630_random 102549 37 - 103936 ATAATCAGATTCTATGAATGGTAGAGGG--TCTATTCCA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457029 37 - 202140232 ACAATCAGATTCTATGAATGGTAGAGGG--TCTATTCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1323350 37 + 181584905 ACAATCAGATTCTATGAATGGTAGAGGG--TCTGTCCCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1290328 37 + 174439528 ACAATCAGATTCTAAGAATGGTAGAGGG--TCTGTCCCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1416503 39 + 91010382 ACAATCAGATTCTATGAATGGTAGAGGGGATCTGTCCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204169849 37 + 204313951 ACAATCAGATTCTATGAATGGTAGAGGG--CCTAGCCCA i calJac3.chr2 C 0 C 0 s mm10.chr13 74343668 37 + 120421639 GCAGTCAGACTTCATGAACAATAGATGG--ACTGCTaca i mm10.chr13 C 0 I 504 e canFam3.chr34 11957382 246 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=14964.000000 s hg38.chr3_KI270937v1_alt 132769 9 + 165607 TGGGATCAG s panTro4.chr3_GL389630_random 102586 9 - 103936 TGGGATCAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457066 9 - 202140232 TGGGATCAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1323387 8 + 181584905 T-GGATCAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1290365 9 + 174439528 TGGGATCAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1416542 9 + 91010382 TGGGATCAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204169886 9 + 204313951 TGGGATCAG i calJac3.chr2 C 0 I 362 e mm10.chr13 74343705 504 + 120421639 I e canFam3.chr34 11957382 246 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=12033.000000 s hg38.chr3_KI270937v1_alt 132778 6 + 165607 ACTGAG s panTro4.chr3_GL389630_random 102595 6 - 103936 ACTGAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457075 6 - 202140232 ACTGAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1323395 6 + 181584905 ACTGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1290374 6 + 174439528 ACTGAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1416551 6 + 91010382 ACTGAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204170257 6 + 204313951 ACTGAG i calJac3.chr2 I 362 C 0 e mm10.chr13 74343705 504 + 120421639 I e canFam3.chr34 11957382 246 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=37596.000000 s hg38.chr3_KI270937v1_alt 132784 17 + 165607 GACCACAACTCTACTTC s panTro4.chr3_GL389630_random 102601 17 - 103936 GACCACACCTCTACTTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457081 17 - 202140232 GACCACAACTCTACTTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1323401 17 + 181584905 GACCACAACTCTACTTC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1290380 17 + 174439528 GGCCACAACTCTACTTC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1416557 17 + 91010382 GACCACAACTCTACTTC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204170263 17 + 204313951 GACCCCAGCTCTACCTC i calJac3.chr2 C 0 C 0 s mm10.chr13 74344209 17 + 120421639 GACCACAACTATATTTC i mm10.chr13 I 504 C 0 e canFam3.chr34 11957382 246 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1627669.000000 s hg38.chr3_KI270937v1_alt 132801 839 + 165607 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGTACCAAGGAGCATTCAGTCGCTATTGTGAGCTTATGAGAAAAGAACTTCTCAGCACGTTTC--AGT-TTTCCAACAGAGAG-AGAACAGGCACACTCAATACCAAGGAACCCACACCGGAAGGGCCCCACGGTCCTCTTTTCAGTAGG-ATTTTATCATCTATCACAGCAGATACTGTTCAT--------T---------TTAATTTATTGCTTTA---CTTGACCTAAATTTAAATCTAATTTATAGATACA-TAACAGATACAAGTAAAAA-TGTTAACATCTATGTTTATATTGGTACTTGCAATTAAGTATTATTACACTGAAAATAATTTCAGCATGCATTGGATACCT---ATGAGAAATTTTTCCCT----TA---------TGTCTATGACTCATATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTT--ACCCCCA---------------------------------------------------------------AGCC-AA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTCGTTCCT-TCAACAGTGAAGTGAACACCTCGGGTTCCTGTTTGCAACACTGTTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTT-AGTGTCCTGAAGGAACAAATGCTGTGGGGGATAGTAATTCAAACTTCCCCTTGAAAACTGTTCACCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAGCTGGGACCCT------CTATTTAACCCTGAAGGGCAGCCCAAGGGGCAAGGAAGGACTGAGCCCCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCCAAAAAGGATACTCACTGACTCAGATA s panTro4.chr3_GL389630_random 102618 839 - 103936 AGGGCCGT-------------GCCTATG--------CTTATGCCTGAGAAGGTGCCAAGGAGCATTCAGTCGCTGTTGTGAGCTTATGAGAAAAGAACTTCTCAGCAAGTTTC--AGT-TTTCTAACAGAGAG-AGAACAGGCACACTCAATACCAAGGAACCCACACCGGAAGGGCCCCACGGTCCTCTTTTCGGTAGG-ATTTTATCATCTATCACAGCAGATACTGTTCAT--------T---------TTAATTTATTGCTTTA---CTTGACCTAAATTTAAATCTAATTTATAGATACA-TAACAGATACAAGTAAAAA-TGTTAACATCTATGTTTATATTTGTACTTGCAATTAAGTATTATTACACTGAAAATAATTTCAGCATGCATTGGATACCT---ATGAGAAATTTTTCCCT----TA---------TGTCTATGACTCATATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTT--ACCCCCA---------------------------------------------------------------AGCC-AA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGAATCTGAAACTTCAGCAGATGCCCTCtcgttcct-tcaacagtgaagtgaacacctcgggttcctgtttgcaacactgttggccactggagacacagaagacacagatccagagggtt-agtgtcctgaaggaacagatgctgtgggggaTAGTAATTCAAACTTCCCCTTGCAAACTGTTCACCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAGCTGGGACCCT------CTACTTAACCCTGAAGGGCAGCCCAAGGGGCAAGGAAGGACTGAGCCCCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCCAAAAAGGATACTCACTGACTCAGATA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457098 825 - 202140232 AGGGCCTT-------------GCCTATG--------CTTATGCCTGAGAAGGTGCCAAGGAGTATTCAGTCGCTATTGTGAGCTTATGAGAAAAGAA-----------GTTTC--GGT-TTTCCAACAGAGAG-AGAACAGGCACACTCAATACCAAGGAACCCACACCGGAAGGGCCCCACGGTCCTATTTTCAGTAGG-ATTTTATCATCTATCACAGCACATACTGTTCAT--------T---------TTAATTTATTGCTTTA---CTTGACCTAAATTTAAATCTAGTTTATAGATACA-TAAGAGATAC-AGTAAAAA-TGTTCACATCTATGTTTATATTTGGACTTGCAATTAAGTAGTATTACACTGAAAATAATTTCAGCATGCATTGGATACCT---ATGAGAAATTGTTCTCC----TA---------TGT-GATGACTCATATG-------------------------AAAACAA----------------------ACT-GTATAGATCCTT--ACCCCCA---------------------------------------------------------------AGCC-AA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGAACCTGAAACTTTAGCAGATGCCCTCGTGTTCCT-TCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGTTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTT-AGTGTCCTGAAGGAACAAATGCTGTGGGGAACAGTAATTCAAATTTCCCCTTGCAAACTGTTCCCCTTCTGACGTATCCAGGTGCT-CCTGTGCATCCAGAGAGCTCAGCTGGGACCCT------CTACTTAACCCTGAAGGGCAGCCCAAGGGGCAAGGAACGACTGAGCCCCCAGGTCCTCCTTTCCACCCTGACTTGGCACTCTAGAAAA-------CCAGGATGAAGCTTGTTTCCAAACAGGATACTCACTGACTCAGATG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1323418 838 + 181584905 AGGGCCGC-------------GCCTCTG--------CTTATGCCTGAGAAGCTGCCAAGGAGCATTCAGTCGCTATCGTGAGCTTACGAGAAAAGAACTTCTCAGCAAGTTTC--AGT-TTTCCAAC--AGAG-AGAACAGGCACGCCAAATACCAAGGAACCCACACCTGAGTGGCCCCACAGTCCTCATTTCAGTAGGAATTTTATCATCTATCACAGCAGATACTGTTCAT--------T---------TTAATTTATTGCTTTA---CTTGATCTAAATTTAGATCTAGTTTATAGATACATTAAGAGATATAAGTAAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTATAACACTGAAAATAATTTCAGCATGTGTTGGACACC-----TGAGAAATTTTTCTCT----TA---------TGTCTATGACTCATATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTT--ACCCCCA---------------------------------------------------------------AGCCAAA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACAGAAGACGCAGATGCAGAGGGTT-AGTGTCCTGAAGGAACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTAGGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAGCTGGGACTCT------CCACTTAACCCTGAAGGGCAGCCCAAGGGGCGAGGAAGGACGGAGCCCCC-GGTCCTCCTTTCCGCCCCGACTCAGCACTCTAGAAAA-------CCAGGATGAAGCCTGTTTCCAAACAGGACACTCACGGACTCAGATG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1290397 838 + 174439528 AGGGCCGC-------------GCCTGTG--------CTTATGCCTGAGAAGGTGCCAAGGAGTACTCAGTCGCTATTGTGAGCTTACGAGAAAAGAACTTCTCAGCAAGTTTC--AGT-TTTCCAAC--AGAG-AGAACAGGCACGCCAAATACCAAGGAACCCACACCTGAGTGGCCCCACAGTCCTAATTTCAGTAGGAATTTTATCATCTATCACAGCAGAtactgttcat--------t---------ttattttattgcttta---ctTGATCTCAATTTAAATCTAGTTTATAGATACA-TAAGAGATATAAGTAAAAA-TGCTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTAtaacactgaaaataatttcagCATGCGTTGGATACCT---ATGAGAAATTTTTCTCT----TA---------TGTCTATGACTCATATG-------------------------AAAACAA----------------------ACTGGTATAGATCCTT--ACCCCCA---------------------------------------------------------------Agcc-aa---------------------------------------aaaaatcatttataatggAACAAAAAG-CATGAACTTACGGAATCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCAACAGTGAAGTGAAAACCTCGGGTTCCTGTTTGCAACACTGCTGGCCACTGGTGACACAGAAGACACAGATGCAGAGGGTT-AGTGTCCTGAAGGAACAGATGCTATGGGGGACAGTAATTTAAGCTTCCCCTTGCAAACTGTTCCCCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAGCTGGGACTCT------CTACTTAACCCTGAAGGGCAGCCCAAGGGGTGAGGAAGGACGGAGCCCCC-GGTCCCCCTTTCCGCCCCGACTCGGCACTCCAGAAAA-------CCAGGATGAAGCCTGTTTCCAAATAGGACACTCACTGACTCAGATA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1416574 840 + 91010382 AGGGCCAT-------------GCCTATG--------CTTATGCCTGAGAAGGTGCCAAGGAGTATTCAGTCGCTATTGTGAGCTTACGAGAAAAGAACTTCTCAGCAAGTTTC--AGT-TTTCCAACAGAGAG-AGAACAGGTACACTAAATACCAAGGAACCCACACCTGAGTGGCCCCACAGTCCTAATTTCAGTAGGAATTTTATCATCTAACACAGCAGATACTGTTCAT--------T---------TTATTTTATTGCTTTA---CTTGATCTAAATTTAAATCTAGTTTATAGACACA-TAAGAGATATAAGTAAAAA-TGTTAACATCTATGTTTGTGTTTGTACTTGCAATTGATTATTATAACACTGAAAATAATTTCAGCATGCGTTGGATACCT---ATGAGGAATTTTTCTCT----TA---------TGTCTATGACTCATATG-------------------------AAAAGAA----------------------ACTGGTACAGATCCTT--ACCCCCA---------------------------------------------------------------AGCC-AA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGAATCTGAAACTTTATCAGATGCCCTCTTGTTCCCATCAATAGTGAAGTGAAAACCTCAGGTTCCTGTTTGCAACACTGTTGGCCACTGGTGACACAGAAGACACAGATGCAGAGGGTT-AGTGTCCTGAAGGAACAGATGCTATGGGGGACAGTAATTTAAACTTCCCCTTGCAAACTGTTCCCCTTCTTATGTACCCAGGTGCT-CCTGTGCATCCAGGGAGCTCAGCTGAGACTCT------CTACTTAACCCTGAAGGGCAGCCCAAGGGGCGAGGAAGGACTGAGCCCCC-AGTCCTCCTTTCCACCCCAACTCGGCACTCTAGAAAA-------CCAGGATGAAGCCTGTTTCCAAACAGGATACTCACTGACTCAGATA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204170280 829 + 204313951 AGGGCCGT-------------GCCTATG--------CTCATAGCTGAGAAGGTGCCATGGAGTATTCAGTTGCTATCAGGAGCAGAAGAGAAAAGAACTTCTCAGCAAGCTTC--AGT-TTTCCAACAGAGAG-AGAACACGCACACCGAATACCAAAGAA---ATACCCACATGGCCACACCGTCCTATCTGCAGTGGGGATCTTATCATCTGTCACAGCAGACACTGTTCATTTTAC---T---------TTAATTTATTGCTTTA---CTTGATCTAAATGGAAATCTAGTTTACAGATACA-TACAAGATATAAGTACAAA-TGTTAGCACCTATGTTTATGCTTGTACCTGCAAT-------TATTACACTGAAAATCATTTGAGCATGCACTGGATGCCT----TGAGAA---TTCCTCT----TA---------TGTCTATGACTCATATG-------------------------GAAACAA----------------------ACTGGTATAGATCCCT--CCCCCCA---------------------------------------------------------------AGCC-AA---------------------------------------AAAAATCATTTATAATGGAACAAAAAG-CATGAACTTACGGATTCTGAAACTTTAGCAGATGCCCTCTTGTTCCCATCCACAGTGAAGTGAAAACCTCGGGTTCCCGTTGGTGACACTGCTGGCCACTGGAGACACAGAAGACACAGATCCAGAGGGTC-AGTGTCCTGAAGGAACAAATGCTG-GGGGGATA-TAATTCAAATTCTGCCTTGCAAACTGGTCACCTTTTTATGTACCCAGGGGCT-CCTGTGCATCCAGAGAGTTCAGCTGGAACCCT------CTACTTAACCCTGAAGGGCAGCCCAAGGGGCAAGGAAGGACTGAGTCCCCAGTTCCTCCTTTCCA-CCTGACTTAGCACTCTAGAAAA-------TCAGGACGAAGCGTGTTTCCAAACAGGATACTCACTGACTCAGATA i calJac3.chr2 C 0 I 193 s mm10.chr13 74344226 950 + 120421639 AAGTTTATATTTAAGGAGAAGGTCTGTGTGCGAAGATTTATTGCTGAGAAATTGTCAAGCAATATTCTATAACC-TTACTAGTTCATATGATAAAAACTTGTGAGTAATGTTCGTATT-TTTTAAACAGAAAG-CAAAAGAG---GCTAAATACAGAGGAGTCTCAACTCCAGTGGC--CATAGTCTTATTTTGTGCAGGAATTCCACAGTTCATCACAGCATATACAGCTCAT--------TAATATTTTCTTATTTTGTTACTTTA---CTTGA----ATTTAGAGTTTAGTTT--AGATAAA----GATTTGCCAGCAAAAA-TGTCAGTATTTATGTTAGTATTT----TTGTAAG-------TATTACACTACACAC-ATTTGAGCATACaattaatattttttaaaaaaaatCTTTCCTTTAAATA---------TGTCCAATATTCAAATATATTAAAATTAGATCATAATCCTTCAAAACAAGAAACGTTTGCAagctgggcttaatggtgcacaccttt--aatcccaacagagttagatggatttctgtgagtttgaggccagcctgatctacataacaaatcccaggccagcc-agagctacatagcgagacattgacttgaataaaacaaaaACAAAAATTGTTTATAATTGAGCA-------TTAAACTTACTGCATCTGAAACTTTAGCTGATGCCTTCTTGTTCTCACCAACAGAGAAGTGAAAGCCGCAGGTCTGTTTTTGGAGTGTTCCTGGCCACTGCAGGGAAATAA-----------ACAGTGTT-AG-GTCTTGAA-GAACAGAAACAGAAGG----AATGAATTAGAATTTTCCTTCTAAATTGTTAACTTTCCTATATATCAAGTTGTT-TTCATTCTTGTAGAAAGTTTACCTGGGACCCT--------------------------GACTAAGAAAGAGGCAAAGACTTAGGTCTT--GTCCTCTCT-----ACTAACTTGGCATTCTAGGAAAGCCTTTTCCAAAAC--AGCCTGTTTCCCAATAGGGTACT-ACTGACC------ i mm10.chr13 C 0 C 0 s canFam3.chr34 11957628 795 + 42124431 AGGAATGG-------------AACCCTG--------AGTTTGACTGAGAAGGTACCAC-CAGCATTCAGTAACTACTGTGAGCTTATGAGAAAACAACCTGTGAACACATTTT--AGTGTCTTCAGCAGAGAATAAGATGGGACCGGTAAACAC-AGAGAGCCTACACTGGAGTGGCTTCACAGTTCTA----------------TGtcactcgtcacagtaaataatgttcatctgtcattt---------tcattctattattttgtgctttgattgaaagtttactctggttt-tagatacc-tacaaactgcaagcaaaaagtgttaacaactatgcttatatttgta----caattaagtactat-atgctaaaaataatttgagcat-cattgga--------atgagaattttttcctt----taaataagaactgtgtgttattccaatAT------------------------ACTGAAA----------------------ACTGGTATAGATCGTTACACCTCTA---------------------------------------------------------------AGCC-AA---------------------------------------TGATATCACTTATAAGGGAACAAAAAATTGTGAACTTACTGAATCTGAAACTTTAGCAGAGGACCTCTTATTCCCATCAATGGTGAAGTGAAAACTGCGGGTGCCTGTCTGCCATGCCGCCGGCCACTGCTG-------AGACACAGATGGAGAGCACTAAGTGTCTTAAACA------------GGGGACTAGTGACCAAAATTTCCCCTT--AAGTTGTCAACCTCTTCAAGTACCCAGGTGCTCCCCGTTCACCTAGAAAGCTCAGCTGGGGTTAAGTAGAGGTACTTAACCCTGAAGGCTAG------------GGAAGGGCTAAA------------------------GACTTGGCACCCCAGGAAAATCCCT-TCAGGATGAAGCCTGTTTCCAAACAGGACACTCATAGACTCAGACA i canFam3.chr34 I 246 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3951.000000 s hg38.chr3_KI270937v1_alt 133640 5 + 165607 CGAGA s panTro4.chr3_GL389630_random 103457 5 - 103936 CGAGA i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457923 5 - 202140232 CGAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324256 5 + 181584905 CCACA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1291235 5 + 174439528 CCACA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417414 5 + 91010382 CCACA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204171302 5 + 204313951 caaaa i calJac3.chr2 I 193 C 0 s canFam3.chr34 11958423 5 + 42124431 GGAGA i canFam3.chr34 C 0 I 225 e mm10.chr13 74345176 0 + 120421639 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=45021.000000 s hg38.chr3_KI270937v1_alt 133645 27 + 165607 TGAAAAAGACGCACTTCCTCTGGGAAG s panTro4.chr3_GL389630_random 103462 27 - 103936 TGAAAAAGGTGCACTTCCTCTGGGAAG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457928 27 - 202140232 TGAAAAAGGCACACTTCCTCTGTGAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324261 27 + 181584905 TGAAAAAGGCACACTTCCTCTGTAAAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1291240 27 + 174439528 TGAAAAAGGCACACTTCCTCTGTAAAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417419 27 + 91010382 TGAAAAAGGCACACTTCCTCTGTAAAG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204171307 27 + 204313951 tgaaaaAGGCACATTTCCCCCGTAAAG i calJac3.chr2 C 0 C 0 s mm10.chr13 74345176 14 + 120421639 -------------CTTGCTTTGCAGAA i mm10.chr13 C 0 C 0 e canFam3.chr34 11958428 225 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=588764.000000 s hg38.chr3_KI270937v1_alt 133672 329 + 165607 TCTTCACTTATGCTACTTAGTGGAGGAGGGGAAAGACATCCAGATCGTATTACTGTATGTGGTATTTTGCAAATAATGAAGCATTTTAACCGGCTCCATCAGAGCCCTTTCCACATTACAGTTCCAATCGTCCAGGAGGGCTTGCGG--TC--AGTTCAAAAGGCACTGGACACCTGAATCAGGAGATCTGTATCCTGGAACAG------------TAAAGGCTGACA----GC------CCAGAGGGAAGAGGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCGG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGT-----------------------------------TGATGCTGGCTTTTTCCTGGCCAACGTCTACAACTTGACATATCTC s panTro4.chr3_GL389630_random 103489 328 - 103936 TCTTCACTTATGCTACTTAGTGGAGGAGGGGAAAAACATCCAGATTGTATTACTGTATGTGGTATTCTGCAGATAATGAAGCATTTTAACCGGCTCCATCAGAGCCCTTTCCACATTACAGCTCCAATCGTCCAGGAGGGCTTGCGG--TC--AGTTCAAAAGGCACTGGACA-CTGAATCAGGAGATCTGTATCCTGGAACAG------------TAAAGGCTGACA----GC------CCAGAGGGAAGAGGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCGG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGT-----------------------------------TGCTGCTGGCTTTTTCCTGGCCAACGTCTACAACTTGACATATCTC i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2457955 328 - 202140232 TCTTAATTTATGCAACTTAGTGGAGAAGGGGAAAGACATCTAGATCGTTTTACTGTATGTGGTATTTTGCAAATAATGAAGCATTTTAACTGGCTCCATCAGAGCCCTTTCCACATTACAGTTCCAATTGTCCATGAGGGCTTGCGG--TC--AGTTCAAAAGGCACTGGACA-CTGAATCAGGACATCTGTATCCTGGAACAG------------TAAAAGCTGACA----GC------CCAGAGGGAAGAGGT-GTCATCCCTTCATC--ACACAGGA---GGATGTCAG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGC-----------------------------------TGCTGCTGGCTTTTTCCTGGCCAACATCTACAACTTGAGATATCTC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324288 324 + 181584905 TCTT-ATTTAT-CTACTTAGTGGAGAA--GGGAAGACATCTATATCGTATTACTGTATGTGGTATTTTGCAAGTAATGAAGCATTTTAACTGGCTCCAGCATAGCCCTTTCCACATTACAGTTCCAGTCGTCCATGAGGGCTtgtgg--tc--agttcaaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG------------TAAAAGCTGACA----GC------CCAGAGGGAGGAGGT-GTCATTCCTTCATC--ACACAGGA---GGATGCTGG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAATTTGACACATCTT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1291267 326 + 174439528 TCTTAATTTAT-CTACTTAGTGGAGAA-GGGGAAGACATCTATATCGTATTACTGTATGTGGTATTTTGCAAATAATGAAGCATTTTAACTGGCTCCAGCATAGCCCTTTCCACATTACAGTTCCAGTCGTCCATGAGGGCTTGTGG--TC--AGTTCAAAAGGCACTGGACA-CTGAATCAGGAGATCTGTATTCTGGAGCAG------------TAAAAGCTGACA----GC------CCAGAGGGAGGAGGT-GTCATCCCTTCATC--ACACAGGA---GGATGCTGG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGC-----------------------------------TGTTCCTGGCTTTTTCCTGGCCAATGTCTACAACTTGACACATCTC i papAnu2.chr6 C 0 I 8902 s chlSab2.chr4 1417446 327 + 91010382 TCTTAATTTATGCTACTTAGTGGAGAA-GGGGAAGACATCTATATCGTATTACTGTATGTGGTATTTTGCAAATAATGAAGCATTTTAACTGGCTCCATCATAGCCCTTTCCACATTACAGTTCCAGTCGTCCATGAGAGCTtgcgg--tc--agtccaaaaggcactggaca-ctgaatcaggagatctgtattcTGGAGCAG------------TAAAAGCTGACA----GC------CCAGAGGGACGAGGT-GTCATCCCTTCATC--ACACAGGA---GGATGTTGG-------------------------------------------------------ATGCACACTCT-CCCCTGCCTGGC-----------------------------------TGCTCCTGGCTTTTTCCTGGCCAATGTCTACAATTTGACACATCTT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204171334 328 + 204313951 TCTTAATTTATGCTACTTAGTAGAGAGTGGGAAAGACAACTACATTGTATTACTGTATGTGGTATTCTGCAAATAATGAAGCATTTTAACTGGCTCCATCACAGCCCTTTCCACATTACAGTTCCGATTGTCCACGAGGGTTTGCGG--TC--AGTTCAAGAGGCAATGGA---CTGCATCA-GAGATCTGTATTCTGGAAGAT------------TAAAAGCTGATG----GC------CTAGAAAGATGAGGT-GTCATCCCTTCATCATACACAGGA---GGATGTCAG-------------------------------------------------------ATGCACACTCTCCCCCTGCCTGGC-----------------------------------CGCTCCTGGCTTTTTCCTGGCCAACGTCTACAACTTGCCACATGTT i calJac3.chr2 C 0 C 0 s mm10.chr13 74345190 303 + 120421639 TATTATTCTGT-TAACTCAGTAAAGAATGGCAAAGAAATCCATAT------------TGCTGTGTTTTCTAAAT-ATGAAGCATTTTTACTGGCTCCATCTTAACCCTTCCCATATTGGCTCTCTGCATGTCCTTCAAGACTTTTGT--TTTAAG---AAAATGAACTAGAGA-GCATACTGGGAGACTTGTCCTCTGGAACAGGCTACTCCTTATTGAAACAAGGTA----ACCCTTAACCTTAGGGATGAAATCATAATGCCTTTAGC--ATATATAACCGAGACTTTAG-------------------------------------------------------CCACACACCCT-CTCATG---GAT-----------------------------------CAGGCCTG--TTCTCCCTG--------------------------- i mm10.chr13 C 0 C 0 s canFam3.chr34 11958653 412 + 42124431 CCTGAATTTATGATTCTTAGTGGAGAATGGGAAAGATTTACATTTTG------CGAAAGTGGTAGTTTGCAAACAATGAAGCACTTTTACGGGATCCAT------CCTCTTCACCCTAGAGCACCACATGTTCTGCAAGGTTTTGTGCTTC--ATTTAGAAAAGCACTGGACA-GTGTAGTGGGAGATCCGTTTTCTAGAAGAGGCTC--------TATTGCTTGTTGTGACGC------CTAGGCACCAGTGGG-ATCATCCCTCCACTCTTAATGTGA---GGACTCCAGGCCCAGAGGTGATCACAGACCTGCTTTACCACTCTCCACATCTGTTCTGGGCTTTAGGCACATCCT-CTCTTGTCTGTCATACTCCACGGtgctgttccctctgtctggacacttgcctctggcctttccctggctaacttctacaactctccc------ i canFam3.chr34 I 225 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=66940.000000 s hg38.chr3_KI270937v1_alt 134001 54 + 165607 -----ACTGCTTAAATTT--TCCATCTTAGAAACCTT-------------TACTCAAGA--AAACTGGTTTTAGTG s panTro4.chr3_GL389630_random 103817 54 - 103936 -----GCTGCTTAAATTT--TCCATCTTAGAAAGCTT-------------TACTCAAGA--AAACTGGTTTTAGTG i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2458283 54 - 202140232 -----GCTGCTTAAATTT--TCCATCTTAGAAAACTT-------------TACTCATGA--AAACTGGTTTTAGTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324612 39 + 181584905 -----GCTGCCTAAATTT--TCCATCTTAGAAAC------------------------------CTGGTTTTAGCG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1300495 54 + 174439528 -----GCTGCCTAAATTT--TCCATCTTAGAAACCTT-------------TACCCAAGA--AAACTGGTTTTAGTG i papAnu2.chr6 I 8902 C 0 s chlSab2.chr4 1417773 39 + 91010382 -----GCTGCCTAAATTT--TCCATCTTAGAAAC------------------------------CTGGTTTTAGTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204171662 52 + 204313951 -------ATCTTAAATAT--TCCATCTTAGAAAACTT-------------TACCCAAGA--AAAGTGCTTTTAGTG i calJac3.chr2 C 0 C 0 s mm10.chr13 74345493 71 + 120421639 -----ACTGGTTACCCTTAGCCTTCCTCAGGAAACTTCTCTAACTCCCCATATCCAAGGTTAACCTGGTGTCAGTG i mm10.chr13 C 0 C 0 s canFam3.chr34 11959065 59 + 42124431 aaggtttggcttaaatgt--cCCACTCTATAAACACT-------------TATTCAAGA--AAACTAGTATTAATG i canFam3.chr34 C 0 I 17 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=38049.000000 s hg38.chr3_KI270937v1_alt 134055 27 + 165607 TTTAGTTTTTAGTGGCTCTGTGTGAG--A s panTro4.chr3_GL389630_random 103871 27 - 103936 TTTAGTTTTTAGTGGCTCTGTGTGAG--A i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2458337 27 - 202140232 TTTAGTTTTTAGTGGCTCTGTGTGAG--A i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324651 26 + 181584905 TTTAGTTTTTAGCGGCTGTGTGTGAG--- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1300549 26 + 174439528 TTTAGTTTTTAGCGGCTGTGTGTGAG--- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417812 28 + 91010382 TTTAGTTTTTAGCGGCTGTGTGTGAGAG- i chlSab2.chr4 C 0 I 54 s calJac3.chr2 204171714 27 + 204313951 TTTAGTTTTCAGTGGCTCAGTGTGAG--A i calJac3.chr2 C 0 C 0 e mm10.chr13 74345564 0 + 120421639 C e canFam3.chr34 11959124 17 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=100.000000 s hg38.chr3_KI270937v1_alt 134082 1 + 165607 G s panTro4.chr3_GL389630_random 103898 1 - 103936 G i panTro4.chr3_GL389630_random C 0 C 0 s ponAbe2.chr3 2458364 1 - 202140232 G i ponAbe2.chr3 C 0 C 0 s calJac3.chr2 204171741 1 + 204313951 C i calJac3.chr2 C 0 C 0 s canFam3.chr34 11959141 1 + 42124431 G i canFam3.chr34 I 17 C 0 e mm10.chr13 74345564 0 + 120421639 C e chlSab2.chr4 1417840 54 + 91010382 I e papAnu2.chr6 1300575 0 + 174439528 C e macFas5.chr6 1324677 0 + 181584905 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=38975.000000 s hg38.chr3_KI270937v1_alt 134083 38 + 165607 AGGTCACACTGTCCCATATGCTAAGGTTGGCCAGCCAT s panTro4.chr3_GL389630_random 103899 37 - 103936 AGGTGACACTGTCCCATATGCTAAGG-TGGCCAGCCAT i panTro4.chr3_GL389630_random C 0 N 0 s ponAbe2.chr3 2458365 38 - 202140232 AGGTGACACTGTCCCATATGCTAAGATTGGCCAGCCAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324677 37 + 181584905 AGGTGACACTGT-CCATATGCTAAGGTTGGCCAGTCAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1300575 37 + 174439528 AGGTGACACTGT-CCATATGCTAAGGTTGGCCAGTCAT i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204171742 37 + 204313951 AGGTGACATTCT-CCATGTGCTAAGGTTGGCCAGCCAT i calJac3.chr2 C 0 C 0 s mm10.chr13 74345564 31 + 120421639 ----AAATCAGTCCAGTGTG---AATCCAGTCAGCCAT i mm10.chr13 C 0 C 0 s canFam3.chr34 11959142 28 + 42124431 AGGCCACATTCT-TCATATGTGAA------CCAAC--- i canFam3.chr34 C 0 C 0 e chlSab2.chr4 1417840 54 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=111491.000000 s hg38.chr3_KI270937v1_alt 134121 72 + 165607 TTAGGGGATACGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTGAA---TAGTCTCAGAAATATCATCAA s panTro4.chr3 201669163 69 + 202329955 TCAGGGGATACGT-TTTCCATTCTGCTGGTGGCATTTTAGAAGACC-------ACTGAA---TAATCTCAGAAAT---ATAAA i panTro4.chr3 N 0 C 0 s ponAbe2.chr3 2458403 72 - 202140232 TTAGGGGATATGT-TTTCCATTCTGCTGGCGGCATTTTAGAAGACC-------ACTGAG---TAGTCTCAGAAATATCATAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324714 72 + 181584905 TTAGAGGATACAT-TTTCCATTCTGCTAGCTGCATTTTAGAAGACC-------ACTGAA---TAGTCTCAGAAATATCATAAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1300612 72 + 174439528 TTAGAGGATACAT-TTCCCATTCTGCTGGGTGCATTTTAGAAGACC-------ACTGAA---TAGTCTCAGAAATATCATAAA i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204171779 72 + 204313951 TTAGGGGATGTGT-TTTCCATTCTGCTGGCTGCATTTTAGAAGACC-------ACTGAA---TAGTCTCAGAAATATCATAAA i calJac3.chr2 C 0 C 0 s mm10.chr13 74345595 79 + 120421639 TAAGAGAATACAT-TTTTCGTTTTACTTACTCTACTTAAAAAGACCAAAATATAATGAA---GAGACTTGGACATATCCCCCC i mm10.chr13 C 0 C 0 s canFam3.chr34 11959170 76 + 42124431 TTATGAGGCATGTCTTTCCATTCTGCTGACTGCATTTTAGAGAACG-------GATAAAATGAAATCTTAGTAATCTCACAAA i canFam3.chr34 C 0 C 0 e chlSab2.chr4 1417840 54 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=5922.000000 s hg38.chr3_KI270937v1_alt 134193 3 + 165607 GAA s panTro4.chr3 201669232 3 + 202329955 GAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458475 3 - 202140232 GAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324786 3 + 181584905 GAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1300684 3 + 174439528 GAA i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204171851 3 + 204313951 GAA i calJac3.chr2 C 0 C 0 s canFam3.chr34 11959246 3 + 42124431 GAA i canFam3.chr34 C 0 I 332 e mm10.chr13 74345674 0 + 120421639 C e chlSab2.chr4 1417840 54 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=339658.000000 s hg38.chr3_KI270937v1_alt 134196 285 + 165607 TAGTTTTAGGggctgggcgtggtggctcatgcctgtaatcccagca-ttttgggaggccaaggtgggcagatcacctgaagtcaggagttcgagaccagtctggccaacatggcaaaaccccctctctact--------aaaaattagctggtcgtggtggcgggcacctgtaatcccagctacttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagactgtgccactgtactccggcctgggcgacagagcgagacaatgtctcc s panTro4.chr3 201669235 285 + 202329955 TAGTTTTAGGggctgggcgcagtggctcatgcctgtaatcccagca-ttttgggaggccaaggtgggcagatcacctgaagtcaggagttcaagaccagtctggccaacatggcaaaaccccctctctact--------aaaaattagctggacgtggtggcgggcacctgtaatctcagctacttgggaagctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagccgagactgtgccactgtactccggcctgggcgacagagcgagacaatgtctcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458478 286 - 202140232 TAGTTTTAGGggctgggcgcggtggctcatgcctgtaatcccagcatttttgggaggccaaggtgggcggatcacctgaagtcaggagttcgacaccagtctggccaacatggcgaaatcccctctctact--------aaaaattagctgggcgtgatggcgggcacctgtaatcccagctacttgggaagctaaggcaggagaattccttgaacccaggaggcagaggttgcagtaagcctagactgtgccaccgtactccagcctgggcgacagagtgagacaatgtctcc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1324789 285 + 181584905 TAGTTTTAGGggctgggcacggtggctcctgcctgtaatcccagca-ttttgggaggccaaggtgggtggaacacttgaagtcaggagttcaagaccagtctggccaacatggcgaaaccctgtctctact--------aaaaattagccgggcatggtggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacacaggaggcagaggttgcagtgagcctagactctgccactgcactccagcctgggcaacagagcgagacaatgtctcc i macFas5.chr6 C 0 I 8 s papAnu2.chr6 1300687 285 + 174439528 TAGTattaggggctgggcgcggtggctcctgcctgtaatcccagca-ttttgggaggccaaggtgggtggaacacttgaagtcaggagttcaagaccagtctggccaacatggcgaaaccctgtctctact--------aaaaattagccgggcatggtggtgggcacctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagagagcctagactctgccactgcactccagcctgggcaacagagcgagacaacgtctcc i papAnu2.chr6 C 0 I 8 s calJac3.chr2 204171854 279 + 204313951 TAGTTTTAGGggctgggcacagtggcttatgcctgtaatcccagca-ctttgggaagctgaggtgggcagattacctgaggtcaggagttcgagaccagtctggccaacacggcaaaaccccatctctactaaacacacaaaaattagccaggcgtggtggcgggcacctgtaatcccagctacttggaaggctgaggcaggagaatggcttgaacccgggaggcagtggctacag-------------cgtcactgcactccagcctgggcaatggagcgagactctatctc- i calJac3.chr2 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e canFam3.chr34 11959249 332 + 42124431 I e chlSab2.chr4 1417840 54 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=5598.000000 s hg38.chr3_KI270937v1_alt 134481 19 + 165607 aaaaaa-----------acaaaaga----aaaaa s panTro4.chr3 201669520 17 + 202329955 -aaaaa-----------acaaaag-----aaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458764 22 - 202140232 -aaaaa-----------acaaaagaaaaggaaaa i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325082 30 + 181584905 aaaaaagagagagagaaaagaaaaa----aaaaa i macFas5.chr6 I 8 C 0 s papAnu2.chr6 1300980 24 + 174439528 aaaaaagagag------aaaagaaa----aaaaa i papAnu2.chr6 I 8 C 0 s chlSab2.chr4 1417894 19 + 91010382 aaaaaa-----------aaaagaaa----agaaa i chlSab2.chr4 I 54 C 0 s calJac3.chr2 204172133 6 + 204313951 ------------------------a----aaaaa i calJac3.chr2 C 0 C 0 e mm10.chr13 74345674 0 + 120421639 C e canFam3.chr34 11959249 332 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=102638.000000 s hg38.chr3_KI270937v1_alt 134500 50 + 165607 aaaaGCTTTAGGAAAT--TATGCACTCAGCAATCAGAAGAGGGGATGTGAGG s panTro4.chr3 201669537 50 + 202329955 aaaaGCTTTAGGAAAT--TATGCACTCAGCAATCAGAAGAGGGGATGTGAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458786 50 - 202140232 aaaaGCTTTAGGAAAT--TATACACTCAGCAATCGGAAGAGGGGACGTGAGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325112 50 + 181584905 AAAAGCTTTAGGAAAT--AATACACTCAGCAATCAGAAGAGGGGATGTGAGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301004 50 + 174439528 aaaagctttaggaAAT--AATACACTCAGCAATCAGAAGAGGGGATGTGAGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417913 51 + 91010382 aaaaGCTTTAGGAAAT-AAATACACTCAGCAATCAGAAGAGGGGATGTGAGA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172139 50 + 204313951 aaaaaaTTTAGGAAAC--AATACACTCAACAATCAGAAGAGGGGATGTGAGA i calJac3.chr2 C 0 C 0 s mm10.chr13 74345674 52 + 120421639 AAAAGTTCTAGGTAGTCAAGTACACTTAGTAATCAGAAACGGGGAAGTCAGG i mm10.chr13 C 0 C 0 e canFam3.chr34 11959249 332 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=30358.000000 s hg38.chr3_KI270937v1_alt 134550 16 + 165607 GATGTCTTCAAGTATT s panTro4.chr3 201669587 16 + 202329955 GATGTCTTCAAGTATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458836 16 - 202140232 GATGTCTTCAAGTATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325162 16 + 181584905 GATGTCTTCAAGTATT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301054 16 + 174439528 GATGTCTTCAAGTATT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417964 16 + 91010382 GAGGTCTTCAAGTATT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172189 16 + 204313951 GATGTCTTCAAGTATT i calJac3.chr2 C 0 C 0 s mm10.chr13 74345726 16 + 120421639 AGTGATCATAAGAATT i mm10.chr13 C 0 I 2297 s canFam3.chr34 11959581 12 + 42124431 GATAGCTCCAAT---- i canFam3.chr34 I 332 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=165032.000000 s hg38.chr3_KI270937v1_alt 134566 95 + 165607 TAGAAATA-----CTTGCAATTCACAAATTACTTATTATGTGGGATAAAAAATTATTCTTCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT s panTro4.chr3 201669603 95 + 202329955 TAGAAATA-----CTTGCAATTCACAAATTACTTATTATGTGGGATAAAAAATTATTCTTCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458852 94 - 202140232 TAGAAATA-----CTTGCAATTCAGAAATTACTTATTATGTGGGATAAAAAATTA---TTCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325178 97 + 181584905 TAGAAATA-----TTTGCAATTCAGAAATTACTTATTATGTGGAATAAAAAATTATTCTCCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301070 95 + 174439528 TAGAAATA-----CTTGCAATTCAGAAATTACTTGTTATGTGGGATAAAAAATTATTCTCCATTTCTCCAATTTCTAG----------TCTGTTTTTATTGACATAAGCt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1417980 97 + 91010382 TAGAAATA-----TTTGCAATTCAGAAATTACTTATTATGTGGAATAAAAAATTATTCTCCATTTCTCCAATTTCTAG--------TCTCTGTTTTTATTGACATAAGCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172205 101 + 204313951 TAGAAATA-----CTTGCAATTCAGAAATTATTTATTCTGTACAAGAGAAAA--ATTCTTCATTTCTCTAATTTCTAGACT--ATTTCTTTGTTTTTATTGACATAAGCT i calJac3.chr2 C 0 I 283 s canFam3.chr34 11959593 107 + 42124431 TACAAATAAGTTTCTTGGATTTC--TAAGTAGATCTTAACTGACAAAAGCAA-TATTCTTAAATTCTTCAATTTCAACTTTAAATATATTTGTTTTTATCGATATAAGCC i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=232412.000000 s hg38.chr3_KI270937v1_alt 134661 171 + 165607 AATTTAGTTTTTTCTTTTTTCAGAAAAT------GAGAA--AGAACGAATATTCTTCTACCTTAGTATAATTTTTTACATGGTAAAATCATATTTTAAGAAAGAAGTCTTTGAAATAATTTTAATAAAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAATAGCACC s panTro4.chr3 201669698 171 + 202329955 AATTTAGTTTTTTCTTTTTTCAGAAAAT------GAGAA--ACAACGAATATTCTTCTACCTCAGTATAATTTTTTACATGGTAAAATCATATTTTAAGAAAGAAGTCTTTGAAATAATTTTAATAAAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAATAGCACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2458946 171 - 202140232 AATTTAGTTTTTACTTTCTTCAGAAAAC------GAGAA--AGAATGAATATTCTTCTACCTCAGTATAATTTTTTACACGGTAAAATCATATTTTAAGAAAGAAGCCTTTGAAATAATTTTAATACAAACGTTCTTGAAAATTTTGTAAAGTGCCCTATTAACATAGGTAATAGCACC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325275 175 + 181584905 AATTCAGTTTTTTCTTTTTTCAGAAAATAAA--CGAGAA--AGAACAAATATTCTTCTACTTTAACATAATTTTTGTCATGGTAAAATCATATTTTAAGAAATAAGTCTTTGAAATAATTTTAATATAAATGTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301165 173 + 174439528 aattcagttttttcttttttcagaaaatgaa--tgagaa--agaacAAATATTCTTCCACCTTAGtataatttttgacaaagtaaaatcatattttaagaaagaagtc--TGAACTAATTTTAATACAAACTTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418077 175 + 91010382 AATTCAGTTTTTTCTTTTTTCAGAAAATAAA--TGAGAA--AGAACAAATATTCTTCTACCTTAACATAATTTTTGTCATGGTAAAATCATATTTTAAGAAATAAGTCTTTGAAATAATTTTAATACAAATGTTCTTGAAACTTTTGTAAACTGCCCTATTAACACAGGTAACAGCACC i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11959700 158 + 42124431 AATT----------TTTCCCCAGAAAATGAATCTAAAAACTAAAAAGAATATTCTTCTGTTTTAGTATAATTTTAAAATTGGTAAAATCATATCTT---AAACAAGTC----AGAGAATTTTAATACAAATGTTCTTGAAAATTTTATAAAGTACAGTAT----AAAGGTATTAGCTTC i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e calJac3.chr2 204172306 283 + 204313951 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=86680.000000 s hg38.chr3_KI270937v1_alt 134832 48 + 165607 AATAAAAACAGTACATT-----ATACC------AAATGTAAGTAGAAACAGTGAGATCA s panTro4.chr3 201669869 48 + 202329955 AATAAAAACAGTACATT-----ATACC------AAATGTAAGTAGGAACAGTGAGATCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459117 48 - 202140232 TATAAAAACAGTATATT-----ATACC------AAACGTAAGTAGAAACAGTGAGATCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325450 48 + 181584905 AATAACAACAGTGTATT-----ACACC------AACTGTAAGTAGAAACAGTGAGATCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301338 48 + 174439528 AATAACAACAGTGTATT-----ACACC------AACTGTAATTAGAAACAGTGAGATCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418252 48 + 91010382 AATAACAACAGTGTATT-----ACACC------AAATGTAAGTAGAAACAGTGAGATCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172589 48 + 204313951 aaaaaaaaCAGTATGCT-----ATATC------AAATGTAAATAGAAACAGTGAGGTCA i calJac3.chr2 I 283 C 0 s canFam3.chr34 11959858 59 + 42124431 AAAAAGAACAGTATATTTTGCAATACCAAACCGAAATTAAAATAGAAACCATGAGTCCA i canFam3.chr34 C 0 I 1445 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=178451.000000 s hg38.chr3_KI270937v1_alt 134880 112 + 165607 CTAAATGTTTATTCGTTCTTTCTAGGATGTTGATGTGGAATACACAC-----TGCCCACTCCCCACCACACACACACACAGCTGCCTT-AAAAGGGGCAGCTACTATAACACAATCTT s panTro4.chr3 201669917 112 + 202329955 CTCAATGTTTATTCGTTCTTTCTAGGATGTTGATGTGGAATACACAC-----TGCCCACCCCCCACCACACACACACACAGCTGGCTT-AAAAGGGGCAGCTACTATAACACAATCTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459165 112 - 202140232 CTAAATGTTTATTTGTTCTTTCTAGGATATTGATGTGGAATACACAC-----TGCCCACCCCCCACCACACACACACAGAGCTAGCTT-AAAAGGGGCAGCTACTATAACACAATCTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325498 110 + 181584905 CTAAA-GTTTATTTGTTCTTTCTAGGATGCTGACATGGAATGCCCAC-----TGCCCGC-CCCGGCCACACACACATAGAGCCAGCTT-AGAAGGGGCAGCTCCCATAACACAACTGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301386 110 + 174439528 CTAaa-gtttatttgttctttctaGGATGCTGACGTGGAATGCCCAC-----TGCCCAC-CccggccacacacacacagggccaGCTT-AGAAGGGGCAGCTCCCATAACACAACCGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418300 111 + 91010382 CTAAATGTTGATTTGTTCTTTCTAGGATGCTGACGTGGAATACCCAC-----TGCCCAC-CCCCGCCACACACACACAGAGCCAGCTT-AAAAGGGGCAGCTCCCATAACACAACCGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172637 104 + 204313951 CTAAATGTTTATTTGTTCTCTCTAGAATGTTCATGTGGAATACCCCC-----CACCCCACCCCTGCCGCAGAC--------CTAGCTT-AAAAGGCGCAGCTACTATAATAAAATCTT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11961362 118 + 42124431 CTAAGCATTTGTTTCTTCTTTCTAAGATGTTCATGTTGAATAAGGacacatatacacatacacacacatacacacacatGGCTAGCTTCAACAGTGGCAGCTATTATCATGAAATCtt i canFam3.chr34 I 1445 I 722 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=258840.000000 s hg38.chr3_KI270937v1_alt 134992 162 + 165607 GAACAAATCATCACGCCATCCCCCTGGGGAAAAGGACACTAACCCTCTGCATCTAAATCTCATCTGGGGCAGATTTTTGAATCTGGAAAGCCCAACTTCAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTACTTTTGACACAAAACTAGTCTTTTGT--G s panTro4.chr3 201670029 162 + 202329955 GAACAAATCATCACGCCATCCCCCCGGGGAAAAGGACACTAACCCTCTGCATCTAAATCTCATCTGGGGCAGATTTTTGAATCTGGAAAGCCCAACTTCAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTACTTTTGACACAAAACTAGTCTTTTGT--G i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459277 162 - 202140232 GAACAAATTATCACGCCATCCCCCTGGGGAAAAGGACACTAACCCTCTGCATCTAAATCTAATCTGGGGCAGATTTCTGAATTCGGAAAGCCCAACTTTAAGCCAATGTCAGTCTTTAGATAAAACTCAAAACTAGTTTTGACACAAAACTAGTCTTTTGT--G i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325608 161 + 181584905 GAACAAATTATCACGCCATCCCCTTGGGGACAAGGACACTCACCCTCTGCGTCTAAATCTAATCTGGGGCAGAGTTTTGAATGT-GAAAGCCCAACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301496 160 + 174439528 GAACAAATTATCACGCCATCCCC-TGGGGACAAGGACACTCACCCTCTGTGTCTAAATCTAATCTGGGGCAGAGTTTTCAATGT-GAAAGCCCAACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--g i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418411 161 + 91010382 GAACAAATTATCAAGCCATCCCTTTGGGGACAAGGACACTCACCCTCTACGTCTAAATCTAATCTGGGGCAGAGTTTTGAATTT-GAAAGCCCAACTTTAAGCCAATTTCAGTCTTTAGATAAAACTGAAAACTAGTTTTGACACAAGACTAGTCTTGTGT--G i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172741 163 + 204313951 TAACAAATTACTACGCCATCCCCCTGGAGAAAAAGGCACTGACCCTTTGCATCT-AATCTAACCTGGGGGAGATTTTTGAATTTGGAAAGCCCAACTTTAAGCCAATTTCAGTCTTTAGATAAAATTGAAAACTAGTTTTGACACAAAACTAATCTTTTTTTGG i calJac3.chr2 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e canFam3.chr34 11961480 722 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=181405.000000 s hg38.chr3_KI270937v1_alt 135154 115 + 165607 CCAATTATTAA--TTTTTTAGGAGAAACTATCAAACATTTCCT----------CTAAGAAAAAACATGGGGAACATATAACTAAAAGGAATACTT---------AGACCTTGCTTAACAATACAGAATTTCAGATG s panTro4.chr3 201670191 116 + 202329955 CCAATTATTAAT-TTTTTTAGGAGAAACTATCAAACATTTCCT----------CTAAGAAAAAAAATGGGGAACATATAACTAAAAGGAATACTT---------AGACCTTGCTTAACAATACAGAATTTCAGATG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459439 116 - 202140232 CCAATTATTAAT-TTTCTTAGGAGAAACTATCAAACATTTCCT----------CTAAGAAATAAAATGGGGAACATATAACTAAAAGGAATACTT---------CGACCTTGCTTAACAATACAGAATTTCAGATG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325769 106 + 181584905 CCAATT----AT-TTTTTTAGGAGAAACTATCAAACATTTCCT----------CTAAGAAA-AAAATGGGGAATATA----TAAAAGGAATA-TT---------AGACCTTGCTTAACAATATGGAATTTCAGACA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301656 110 + 174439528 ccaattattaat-ttttttaggagAAACTATCAAACATTTCct----------ctaagaaa-aaaatggggAACATA----TAAAAGGAATA-TT---------AGACCTTGCTTAACAATATGAAATTTCAGACA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418572 110 + 91010382 CCAATTATTAAT-TTTTTTAGGAGAAACTATCAAACATTTCCT----------CTAAGAAA-AAAATTGGCAACATA----TAAAAGGAATA-TT---------AGACTTTGTTTAACAATATAGAATTTCAGATG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204172904 113 + 204313951 TCAATTATTAAT-TTTTTTAGGAGAAACTATTAAACATTTCCT----------CTAAGA---AAAATGGGGAACATATAACTAAAAGGAAAAGTT---------AGACCTTGCTTAACAATATAGAATTTCAGACG i calJac3.chr2 C 0 I 394 s canFam3.chr34 11962202 132 + 42124431 ccACTTACTAACATTTTTTAAGTTAAAGCTTCAAGCATTTTCCAACAGAACAACATAGAGA-AGAATGAGGAA-ATCTACCTAAGAGGTAAAATTAAAGGAAACAGACCTT--TTAATGGCAGGAAAGCACAGGTG i canFam3.chr34 I 722 C 0 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=31059.000000 s hg38.chr3_KI270937v1_alt 135269 27 + 165607 ACTGAATCAGGAGGTGGAGGGGGAAAA s panTro4.chr3 201670307 27 + 202329955 ACTGAATCAGGAGGTGGAGGGGGAAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459555 27 - 202140232 ACTGAATTAGGAGGTGGAGGGGGAAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325875 25 + 181584905 ACTGAATTAGGAGCTGGAGGGGGAA-- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1301766 25 + 174439528 ACTGAATTAGGAGCTGGAGGGGGAA-- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1418682 27 + 91010382 ACTGAATTAGGAGGTGGAGGGGGGAAA i chlSab2.chr4 C 0 C 0 s canFam3.chr34 11962334 22 + 42124431 -----AATGACAGTAAAAGGGAGAAAA i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e calJac3.chr2 204173017 394 + 204313951 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=258203.000000 s hg38.chr3_KI270937v1_alt 135296 155 + 165607 GTAACAAGTGCAGAGACATTCATATCCGAAATCTAGCAAAGTAAGGGGTCCTCATCGAATAAAATGCACCTAT-------AAATC------------ATGAGCAAGAAACGAATCTGCATGTACAGCCTACACAATCACAAAAGCAGCCAACGAAGAACCCAAAAA----CGCACGAC s panTro4.chr3 201670334 155 + 202329955 GTAAGAAGTGCAGAGACATTCATATCAGAAATTTAGCAAAGTAAGGGGTCCTCATCGAATAAAATGCACCTAT-------AAATC------------ATGAGCAAGAAACTAATCTGCATGTACAACCTACACAATCACAAAAGCAGCCAACGAAGAACCTAAAAA----CGCACGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459582 155 - 202140232 GGAAGAAGTGCAGCGACATTAATATACGAAATCTAGCAAAGTAAGGGGTCCTCATCGAATAAAATGCACCTAT-------AAATC------------ATCAGCAAGAAACTAATCTGCATGTACAACCTACACAATCACAAAGGCAGCCAACGAAGAACCTAAAAA----CGCACGAC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1325900 152 + 181584905 --AAGAAGTGCAGAGACATTAAT-TCCGAAATCTAGCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACTAT-------AAATC------------ATGAGCAAGAAACTAATCTGCATGTACAACCCACACAATCACAAAAGCAGCCAGCGAAGAACCTAAACA----CGCATGAC i macFas5.chr6 C 0 I 1148 s papAnu2.chr6 1301791 150 + 174439528 --AAGAAGTGCAGAGACATTAAT-CCCGAAATCTAGCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACTAT---------ATC------------ATGAGCAAGAAACTAATCTGCATGTACAACCCATACAATCACAAAAGCAGCCAGCGAAGAACCTAAACA----CGCATGAC i papAnu2.chr6 C 0 I 1450 s chlSab2.chr4 1418709 154 + 91010382 GTAAGAAGTGCAGAGACATTAAT-CCCGAAATCTACCAAAGTGAGGGGTCCTCATCTAATCAAATGCAACTAT-------AAATC------------ATGAGCAAGAAACTAATCTGCACGTACAACCCATACAATCACAAAAGCAGTCAGCGAAGAACCTAAACA----CGCATGAC i chlSab2.chr4 C 0 I 1148 s calJac3.chr2 204173411 177 + 204313951 GTAAGAAGTATAGAGACACTAACATCCAAAATCTAGCAAAATAA-GAGTTCTCATCTAGTAAAATACATCTAATAAAATAAAATCTCATCTAATAAAATGGGTAAGAAATTAAACTGCAGGTACAATCTGCACAATTACAAGAGCAGCCAACGAAGAGCCTAAAAATAGTTGCACGAC i calJac3.chr2 I 394 I 1138 s canFam3.chr34 11962356 135 + 42124431 -----AAGTGAAGAGAAG------GGTGGAATCTAGCAAAGAGGACAGTCCTCATCTAGTAACAGGTATCTAT-------GAATC------------ATGAAAAGGAAATTGATCT-------------ACACAATCAGAAAAGCAGCCAATAAAGGATCTAAAAGTGGTTGCATGAC i canFam3.chr34 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2548.000000 s hg38.chr3_KI270937v1_alt 135451 1 + 165607 T s panTro4.chr3 201670489 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459737 1 - 202140232 T i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327200 1 + 181584905 T i macFas5.chr6 I 1148 C 0 s papAnu2.chr6 1303391 1 + 174439528 T i papAnu2.chr6 I 1450 C 0 s chlSab2.chr4 1420011 1 + 91010382 T i chlSab2.chr4 I 1148 C 0 s calJac3.chr2 204174726 1 + 204313951 T i calJac3.chr2 I 1138 C 0 s canFam3.chr34 11962491 1 + 42124431 T i canFam3.chr34 C 0 I 1098 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=16605.000000 s hg38.chr3_KI270937v1_alt 135452 9 + 165607 TTCTGTAGG s panTro4.chr3 201670490 9 + 202329955 TTCTGTAGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459738 9 - 202140232 TTCTGTAGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327201 9 + 181584905 TTCTGTAGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303392 9 + 174439528 TTCTGTAGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420012 9 + 91010382 TTCTGTAGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174727 9 + 204313951 TTCTGTAGG i calJac3.chr2 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e canFam3.chr34 11962492 1098 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=113350.000000 s hg38.chr3_KI270937v1_alt 135461 71 + 165607 AAAAGCTACCTTCATCAAGAT---------AAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTCCATTTTGCTAT s panTro4.chr3 201670499 71 + 202329955 AAAAGCTACCTTCATCAAGAT---------AAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTCCATTTTGCTAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459747 80 - 202140232 AAAAACTACCTTCATCAAGTTTTTTTTGTAAAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTCCGTTTTGCTAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327210 69 + 181584905 AAAAGCTAAGTTCAT--AGAT---------AAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTAAATTTCGCTAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303401 69 + 174439528 AAAAGCTAACTTCAT--AGAT---------AAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTAAATTTCGCTAT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420021 68 + 91010382 AAACGCTAACTTCA---AGAT---------AAAAAGACTTTTACAAAACCCAAGA---------------CTAAATTTTGGTTCAATTTTGCTAT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174736 84 + 204313951 AAAAGCTGACTTCATCAATAT---------AAAAATAC--TTAAAAAACACAAGACCATATTTGGTAGGCCTAACTTTTGGTTTAATTTTGCTAT i calJac3.chr2 C 0 C 0 s canFam3.chr34 11963590 83 + 42124431 AAAAGCTATCTTCATCAAGAT---------ATAAAGACTTT---AAGACCAAAGGCATCTTCTAGGAGGCCTAAGTGGCGGCTCAATTTTGCTAT i canFam3.chr34 I 1098 I 245 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=35765.000000 s hg38.chr3_KI270937v1_alt 135532 20 + 165607 CTTGCCATCTGGTCTGAGGT s panTro4.chr3 201670570 20 + 202329955 CTTGCCATCTGGTCTGAGGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459827 20 - 202140232 CTTGCCATCTTGTCTGAGGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327279 20 + 181584905 CTTGCCATCTTGTCTGAGGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303470 20 + 174439528 CTTGCCATCTTGTCTGAGGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420089 20 + 91010382 CTTGCCATCTTGTCTGAGGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174820 20 + 204313951 CTTGCCATTTTGTCTGAAGC i calJac3.chr2 C 0 C 0 e mm10.chr13 74345742 2297 + 120421639 I e canFam3.chr34 11963673 245 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=4434.000000 s hg38.chr3_KI270937v1_alt 135552 6 + 165607 GCCT-----------GG- s panTro4.chr3 201670590 6 + 202329955 GCCT-----------GG- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459847 6 - 202140232 GCCT-----------GG- i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327299 17 + 181584905 GCCTCCGCCGCTGGCGG- i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303490 17 + 174439528 GCCTCCGCCGCTGGCGG- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420109 17 + 91010382 GCCTCCGCCGCTGGCGG- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174840 17 + 204313951 ACCTCCAGGGCTGGTGG- i calJac3.chr2 C 0 C 0 s canFam3.chr34 11963918 7 + 42124431 GCCT-----------GAG i canFam3.chr34 I 245 C 0 e mm10.chr13 74345742 2297 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=107466.000000 s hg38.chr3_KI270937v1_alt 135558 57 + 165607 GGCCTTAGTCTGCAGAAGGAACACTGGGCACCATCTGGG------TTGGGGACAAAGGCACTG s panTro4.chr3 201670596 57 + 202329955 GGCCTTAGTCTGCAGAAGGAACACTGGGCACCATCTGGG------TTGGGGACAAAGGCACTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459853 57 - 202140232 GGTCTTAGTCTGCAGAAGGAACACTGGGCACCATCTAGG------TTGAGGACAGAGAAACTA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327316 57 + 181584905 GGTCTGAGGCTGCAGGAGGAACACTGGGCACCATCTGGG------TTAAGGACAAAGGCACCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303507 57 + 174439528 GGTCTGAGGCTGCAGGAGGAACACTGGGCACCATCTGGG------TTAAGGACAAAGGCACCA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420126 57 + 91010382 GGTCTTAGGCTGCAGAAGGAACACTGGGCACCATCTGGG------TTGACAGCAAAGGCACCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174857 57 + 204313951 GGTCTTGGTCTGCAGAAGGAGCACCGGGCACCATCCGGG------ATGAGGACAAAGGTACTA i calJac3.chr2 C 0 C 0 s mm10.chr13 74348039 52 + 120421639 GGTCTTAGTCTCCAGAGGAATCACTGAGCACCA-----G------CCTAGGACGAGGACACTG i mm10.chr13 I 2297 I 1179 s canFam3.chr34 11963925 54 + 42124431 GGTCGCAGTCTGCACGAGGACGG--AAGCACCAGGCGGGGGATGACTGTGGACAGA------- i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=41519.000000 s hg38.chr3_KI270937v1_alt 135615 30 + 165607 GCTCTATCTAGCTTCTCTCCAACCACAAGC s panTro4.chr3 201670653 30 + 202329955 GCTCTAACTAGCTTCTCTCCAACCACAAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459910 30 - 202140232 GCTCTATCTAATTTTTCTCCAATCACAAGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327373 26 + 181584905 GCC----CTAGCTTTTCTCCAATCACAAGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303564 26 + 174439528 GCC----CTAGCTTTTCTCCAATCACAAGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420183 26 + 91010382 GCC----CTAGCTTTTCTCCAATCACAAGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174914 26 + 204313951 GCC----CTAGCTCTTCTCTAATAGCAAGC i calJac3.chr2 C 0 C 0 s canFam3.chr34 11963979 28 + 42124431 --CCTATCCCGCTTGTCCCCAAACACACCC i canFam3.chr34 C 0 C 0 e mm10.chr13 74348091 1179 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=371590.000000 s hg38.chr3_KI270937v1_alt 135645 241 + 165607 TACCATTGCCCCTAAAAAGTCCCACTGACCATGGGCTTCACCT-----CCTGCTTGTGGACGCCCTCCCAGCAGCTCCTAAGAGCCCAAGAT-GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACGCTAGAACGGTTT--ACA-CGCTTTCCGATGTTGACAGGATGGCTGTATGACTAATCCTC--ACATTTAATTCAAAGAGATTTTCAATAACTATTTCAAAAAGGAGAAAATTG----CAC s panTro4.chr3 201670683 241 + 202329955 TACCATTGCCCCTAAAAAGTCCCACTGACCATGGGCTTCACCT-----CCTACTTGTGGACGCCCTCCCAGCAGCTCCTAAGAGCCCAAGAT-GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGTAACACGCTAGAACGGTTT--ACA-CGCTTTCCGATGTTGACAGGATGGCTGTATGACTAACCCTC--ACATTTAATTCAAAGAGATTTTTAATAACTATTTCAAAAAGGAGAAAACTG----CAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2459940 241 - 202140232 TACCATTTCCCCTAAAAAGTCCCACTGACCATGGGCTTTACTT-----CCTGCTTGTGGACGCCCTCCTAGCAGCTCCTAAGAGCCCAAGAT-GCGGC-GGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAGAACGGTTT--ACA-TGCTTTCTAATGTTGACAGGATGGCTGTATGACTAATCCTC--ACATTTAATTCAAAGAGATTTTTAATAACTATTTCAAAAAGGAGAAAACTG----CAC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327399 239 + 181584905 TAACATTTCCCCTAAAAAGCCCCACTGACCATGGGCTTTACTT-----CTGGCTTGTCAACGCCCTCCTAGCAGCTCTTAAAAGCCCAAGAT-GCGGC-AGGGATCTCTGCTCAGTCAGCACCAATCACAGCAACACACTAGAAC-GTTT--ACA-TGCTTTCTGATG-TGACAGGATGGCTGTATGACTAATCTTC--ACATTTAATTCAACGACGTTTTTAATAACTATTTCAAAAAGGAGAAAACTG----CAC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303590 239 + 174439528 TAACACTTCCCCTAAAAAGCCCCACTGACCATGGGCTTTACTT-----CTGGCTTGTCAACGCCCTCCTAGCAGCTCTTAAAAGCCCAAGAT-GCGGC-AGGGATCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAGAAC-GTTT--ACA-TGCTTTCTGATG-TGACAGGATGGCTGTATGACTAATCTTC--ACATTTAATTCAACGAGGTTTTTAATAACTATttcaaaaaggagaaaactg----CAC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420209 239 + 91010382 TAACGTTTCCCCTAAAATGCCCCAATGACCATGGGCTTTACTT-----CCTGCCTGTGGACGCCCTCCAAGCAGCTCTTAAAAGCCCAAGAA-GCGGC-AGGGATCTCTGCTCAGTCAGCACCAGCCACAGCAACACACTAGAAC-GTTT--ACC-TGCTTTCTGATG-CGACAGGATGGCTGTATGACTAATCTTC--ACATTTAATTCAACGAGGTTTTTAATAACTATTTCAAAAAGGAGAAAACTG----CAC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204174940 197 + 204313951 TACCGT----------------CACTGACCACGGACTTTACTT-----CTTGCTTGTGGACGCCCTCCTGGCAGCTCTTAAGCGCCCAAGAT-GCGGCGGGGGGTCTCTGCTCAGTCAGCACCAACCACAGCAACACACTAAAAC-GTTT--AGA-T-TTACATGATGTAGACGGGATGGGTGCATGACTAATCCTC--ACATTTAATTCAAC---------------------------CAGAAAATCG----CAC i calJac3.chr2 C 0 C 0 s mm10.chr13 74349270 228 + 120421639 TATTATCTCCTGTAAAGGGCTTCAATGATCA-GGACTT--------------------AAAACCCTTCTTGCAGAGCCCAAGGGATAGAGGTGGAAGT-AGGAGTTTGTG-GCAGCAAATACAAATCACAGAAATTATCAAG----GTTTGAAAA-TGCCTTCTGGCCTTGCAAGAATAGCTGC-CAACTAACCCTTGAACATTTCATTGAACATGCATTTTAATATCTATTTCAGAAAATAGACAACTGCAGCCAT i mm10.chr13 I 1179 C 0 s canFam3.chr34 11964007 206 + 42124431 -GTCAGTCTCTTCA---------GCTGACAGGTAGGAGCACCTGCAAGTCTGCTTAGGGAC--------AGCTGACCGCGATGACCCCA----CCGAC-CGCGGACTCTGCACC-----CTCCAGCCACAGCAACTCGTGAAAGC-CTGT--AAACTGTCCTCCGGCGCTGGCGGGATGGCTG-------ACCCTCC--TCACGTGAACTGGTAAGACCT-------CTATTTCAGGACGGACAGAACTG----CAC i canFam3.chr34 C 0 I 431 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=481163.000000 s hg38.chr3_KI270937v1_alt 135886 269 + 165607 AATCACAGGCATAATTCAAATCAATATTGCTGAATGCCTTGGTTCCTCTATTGAGATTTTTACTCTGCAATTTAAAATTACTTTGTAATTAA-GAGGTGGGTGGCTAAGTTCATTTAAAAGAACCAAACAACTAAACCTATCCAATTTCGCTTGATTAAATGAAATCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTCAGAC--ACTCAGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGC s panTro4.chr3 201670924 270 + 202329955 AATCACAGGCATAATTCAAATCAATATTGCTGAATGCCTTGGTTC--CTATTGAGATTTTTACTCTGCAATTTAAAATTACTTTGTAATTAAGGAGGTGGGTGGGTAAGTTCATTTAAAAGAACCAAACAACTAAACCTATCCAATTTCGCTTGATTAAATAAAATCCTAGAAGGCCGATTCTGAAGATGCAATC-GTAGAGGGCACATTCAGACAAACTCAGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCATCCTGGACTAAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460181 267 - 202140232 AATTACAGGCATAATTCAAATCAATATTGCTGAATGCCTTGGTTC--CTATTGAGATTTTTACTCTGCAATTTAAAATTACTTTGTAATTAAGGAGGTGGGTGGGTAAGTTCATTTAAAAGAACCA---AACTAAACCTATCCAATTTAGCTTGATTAAATAAAATCCCAGAAGGCCGATTCTGAAGATGCAATG-GTAGAGGGCACATTCAGACAAACTCAGAGAGCAAGGG--------CTCAGGGAAGTATAACCCTGACCATCGTCCTGGCCTAAGC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327638 270 + 181584905 ATTTATAGACATAATTCAAATCAATATTGCTGAATGCCTTGGTTC--CTATTGACATTTTTACTCTGCAATTTAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTCAGACAAACTCAGAGAGCGAGGG--------CTCAGGGAAGCATAACCCTGACCGTCATCCTGGACTAAGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1303829 270 + 174439528 ATTTATAGGCATAATTCAAATCAATATTGCTGAATGCCTTGGTTC--CTACTGACATTTTTACTCTGCAATTTAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAATTCAGCTTGATTAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTCAGACAAACTCAGAGAGCGAGGG--------CTCAGGGAAGTACAACCCTGACCGTCACCCTGGACTAAGC i papAnu2.chr6 C 0 T 9539 s chlSab2.chr4 1420448 270 + 91010382 AATTACAGGCATAATTTAAATCAATATTGCTGAATGCCTTGGTTC--CTATTGACGTTTTTACTCTGCAATTTAAAATTACTTCGTAATTAAGGAGGTGGGTGGGTAAGTTCATTCAAAAGAACCAAGCAACGAAACCTATCCAGTTCAGCTTGATGAACTAAAACCCTAGAAGGCCGATTCTGAAGATGCAATC-GTGGAGGGCACATTCAGACAAACTCAGAGAGTGAGGG--------CTCAGGGAAGTATAACCCTGACCGTCATCCTGGACTAAGC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175137 266 + 204313951 AATTACAGGCATATTTCAAATCAATATTCCTGAATGCCTTGGTTC--CTACTGACATTTTTACTCTGCAATTTAAAATTACTTTGTAATTAA----GTGGGTGGGTAAGTTCATTTCAAAGAACCAAATAACTAAACCTATCAAATTTACCTTGATTAAATAAAACCCTAGAAGGCCGATTCTGAAGAGGCAATA-GCAGAGGGCACATTCAGACAAACTCAGACAGCAAGGG--------ATCAGGGAAGTATAACCCTGCCCTTCATCCTGGACTAGTC i calJac3.chr2 C 0 C 0 s mm10.chr13 74349498 242 + 120421639 AATTTGATGCACAATGCAAGTCGATACTGTTCAATGTCTTAGGGC--C----------TTTACTTTGTAATT--AAATT--------GTTAAGTAGGTAGGTGAGACAG--AACTTTAAAGAACCC--------AACCTGTCAAATTTAGTTTACGTTAATAAAACCCTAGGAGTGTGACGAATAACAGGTGACCGGCAAAGAGTGCACTGAGACAAGATCTGACAATCTGGGAGGCCAACATCAGACCCCTGCAACCCTGA--GTCACTGTGTAC----- i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=57818.000000 s hg38.chr3_KI270937v1_alt 136155 41 + 165607 CGAGCCCGGCCCT-CGAGGTACT--CAGCGCACAGGCAAG----------CACA s panTro4.chr3 201671194 41 + 202329955 CCAGCCCGGCCCT-CGAGGTACT--CAGCGCACAGGCAAG----------CACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460448 41 - 202140232 GGAGCCCGGCCCT-CCAGGTACT--CAGCGCACAGGCAAG----------CACA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327908 41 + 181584905 CGAGCCCGGCCCT-CGAGGCACT--CAGCGCACAGGCAAG----------CACC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1294560 41 + 174439528 CGAGCCCGGCCCT-CGAGGCACT--CAGCGCACAGGCAAG----------CACC i papAnu2.chr6 T 9539 I 9498 s chlSab2.chr4 1420718 42 + 91010382 CGAGCCCGGCCCCGCGAGGCACT--CAGCGCACAGGCAAG----------CACC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175403 43 + 204313951 CGAGCCCGGCCCT-CGAGGCACTCACAACGCACGGGAAGG----------CACG i calJac3.chr2 C 0 C 0 s mm10.chr13 74349740 41 + 120421639 ---------CTCT-TCAAATGCA--AAAAGAAGTCGCAAGACTGGATGAACAC- i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=230477.000000 s hg38.chr3_KI270937v1_alt 136196 159 + 165607 GGTCCTGGAGTCCTCGCTCGGTCAGTGCCCTGAGCTCTCCGTCTGATTTTTAAAAACTGGCACAGCTGCTTTTAAACACCGGCACATT-TTTGTGGCACAAGGGCCACCAAACGGGACC----CAAAGTACAGGTCCTTAACTTCCAAGATCCCGAAGTGGACA s panTro4.chr3 201671235 160 + 202329955 GGTCCTGAAGTCCTCGCTCGGTCAGTGCCCTGAGCTCTCCGTCTGATTTTTAAAAACTGGCACAGCTGCTTTTAAACACCGGCACATTGTTGGTGGCACAAGGGCCACCAAACAGGACC----CAAAGTACAGGTCCTTAACTTCCAAGGTCCCGAAGTGGACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460489 160 - 202140232 GGTCCTGGAGTCCTCGCTCGGTCAGTGCCCTGAGCTCTCCGTCTCATTTTTAAAAACTGGCACAGCTGCTTTTAAACACTGGCACGTTTTTGGTGGCACAAGGGCCACCAAACAGGACC----CAAAGTAGAGGCCCTTAGCTTACAAGGTCCCGAAGTGGACA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1327949 159 + 181584905 GGTCCCG-CGTCCTCGCCCGGTCAGTGCGCTGAGCTCTCCGTCTGATTTTTAAAAACTGGCACAGCTGCTTGTAAACACCGACACATTTTCAGTGGCACAAGGGCCACCAAACACGACC----CAAAGTTGACACCCTTAACTTACAAGGTCGCGAAGTGGACA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1304099 159 + 174439528 GGTCCCG-CGTCCTCGCCCGGTCAGTGCGCTGAGCTCTccgtctgatttttaaaaactggcacagCTGCTTTTAAACACTGGCACATTTTCAGTGGCACAAGGGCCACCAAACACGACC----CAAAGTAGACACCCTTAACTTACAAGGTCGCGAAGTGGACA i papAnu2.chr6 I 9498 C 0 s chlSab2.chr4 1420760 159 + 91010382 GGTCCCG-CGTCCTCGCCCGGTCAGTGCGCTGAGCTCTCCCTCTGATTTTTAAAAACGGGCACAGCTGCTTTTAAACACTGGCACATTTTCAGTGGCACAAGGGCCACCAAACACGACC----CAAACTTGACACCCTTAACTTACAAGGTCGCGAAGTGGACA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175446 129 + 204313951 GGTCCTGGCGTCCTGGCCCGGTCAGTGCGCGGAGCTCTCGGTCTGATTTTTAAAAACTG-----------------------------------CGCACAAGGGCCACCAAACACCACCCCCGCAAAGCAGAGGCCCTTCACTTACAAGGTCTCCATGTGGACA i calJac3.chr2 C 0 C 0 s mm10.chr13 74349781 113 + 120421639 GGTGCAG-AAGTCTCACCTG----GTATCTTCAAATATCTCTTTGATATTTAAAAACAG---TAGCT---------------------------------AAGGCCACTACACAAAACC---------TGTAAGCTCATCACTTATAAG-TCTTAGTGTCGACA i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=167672.000000 s hg38.chr3_KI270937v1_alt 136355 108 + 165607 TGCACAGATTTGCGC-TCTCTGGAAAGGGGAACTGCAAGCCCAAGCTCGGGCGCGCCGCGCTTCCCACCGGACACCC-ACCCGGCCGAGCCCGGCCACTCCTCGCACCCA s panTro4.chr3 201671395 108 + 202329955 TGCACAGATTTGCGC-TTTCTGGAAAGGGGAACTGCAAGCCCAAGCTCGGGCGCGCCGCGCTTCCCACCGGACACCC-ACCCGGCCGAGCCCGGCCACTCCTCGCACCCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460649 108 - 202140232 TGCACAGATTTGCGC-TTTCTGGAAACGGGAACTGCAAGCTCAAGCTCGGGCGCGCAGCGCTTCCCACCGGACGCCC-ACGCGGCCGAGCCCGGCCACTCCTCGCATCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1328108 108 + 181584905 CGCACAGATTTGCGCTTTTCTGGAAAGCGGAACTGCAAGCCTAAGCTCGGGCGCGCAGCTCTTCCCACCGGCCGCCC-AC-TGGCCGAGCCCGGCCACTCCTCGCACCCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1304258 107 + 174439528 CGCACAGATTTGTGC-TTTCTGGAAAGCGGAACTGCAAGCCCAAGCTCGGGCGCGCAGCGCTTCCCACCGGCCGCCC-AC-CGGTCGAGCCCGGCCACTCCTCGcaccca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1420919 109 + 91010382 CGCACAGATTTGCGCTTTTCTGGAAAGCGGAACTGCAAGCCTAAGCTCGGGCGCGCAGCGCTTCCCACCGGACGCCC-ACGCGGCCTAGCCCGGCCACTCCTCGCACCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175575 97 + 204313951 TGCACAGATTTGCGC-TTTCTGGAAAGGGGAACTGCAGGCCCAAGCTCTGGCGCGCCGCGCTTCCCGCCCGACGCCCGGCCGGGTGGAGCCCGGCCAC------------ i calJac3.chr2 C 0 C 0 e mm10.chr13 74349894 0 + 120421639 C e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=139541.000000 s hg38.chr3_KI270937v1_alt 136463 101 + 165607 CCCAGGCGGTTTCACCCGCCCCGCCGGCCCCACCCACGGGCTGCGGGCGGCCCCGCAGGACAACCCTCACAGAGGGCGGCAGAGGCCCGGCCCAGCCAGGA s panTro4.chr3 201671503 101 + 202329955 CCCGGGCGGTTTCACCCGCCCCGCCAGCCCCACACACGGGCTGCGGGCGGCCCCTCAGGACAACCCTCACAGAGGGCGGCAGAGGCCGGGCCCAGCCAGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460757 101 - 202140232 CCCGGGCAGTTTCACCCGCCTCGCCAGCCCCACCCACCGGATGCGGGCGGTCCCTCAGGACAACCCTCACAGAGGTCCTCAGACTCCCGGCCCAGCCAGGG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1328216 101 + 181584905 CCCGGGCGGTTTCACCCGCCCCGCCCGCCACACCCACGGGCTGCGGGCGGCCCCTCGGGACAACCCGCACAGAGGGCGGCAGAGGCCCAGCCCAGCCAGGA i macFas5.chr6 C 0 I 15 s papAnu2.chr6 1304365 101 + 174439528 cccgggcggtttcacccgccccgcccaccccacccacgggctgcgggcggccccTCGGGACAACCCGCACAGAGGGCGGCAGAGGCCCAGCCCAACCAGGA i papAnu2.chr6 C 0 I 15 s chlSab2.chr4 1421028 101 + 91010382 TCCGGGTGGTTTCACCCGCCCCGCCCGCCCCACCCACGGGCTGCGGGCAGCCCCTCGGGACAACCCGCACAGAGGGCGGCAGAGGCCCAGCCCAGCCAGGA i chlSab2.chr4 C 0 I 20 s calJac3.chr2 204175672 76 + 204313951 ----------TGCACCCGCCCCGTCCGCCCCACCTGCGGGAC---------------AGACAACCAGCACAACAGGCGGCAGAGGCCCGGCCCAGTCAGGG i calJac3.chr2 C 0 I 15 s mm10.chr13 74349894 62 + 120421639 -----------------------CCCAGACTACCAACGGATTACTCGCAGACCC--------GTCCGCATCCAGAATGCAACAGGCCGGTCCC-------- i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1882.000000 s hg38.chr3_KI270937v1_alt 136564 6 + 165607 CTCCAC s panTro4.chr3 201671604 6 + 202329955 CTCCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460858 6 - 202140232 CTCCAC i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1328332 6 + 181584905 ATCCGC i macFas5.chr6 I 15 C 0 s papAnu2.chr6 1304481 6 + 174439528 ATCCGC i papAnu2.chr6 I 15 C 0 s calJac3.chr2 204175763 6 + 204313951 ATACGC i calJac3.chr2 I 15 C 0 s mm10.chr13 74349956 1 + 120421639 -T---- i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e chlSab2.chr4 1421129 20 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=107158.000000 s hg38.chr3_KI270937v1_alt 136570 59 + 165607 CCCGGTGACCTTGGGCAGACACGACTCCTCCCCGAGTCCACCCGCCAGGCA--GAGGCGAG s panTro4.chr3 201671610 61 + 202329955 CCCGGTGACCTTGGGCAGACACGACTCCTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460864 61 - 202140232 CCCGGTGACCTTCGGCAGACACGACTCCTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1328338 61 + 181584905 CCGAGTGACCTTGGGCAGACACGACTCCTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1304487 61 + 174439528 CCGAGTGACCTTGGGCAGACACGACTCCTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1421149 61 + 91010382 CCGGGTGACCTTGGGCAGAGACGACTCCTCCCCGAGTCCACCCGCCAGGCACTGAGGCGAG i chlSab2.chr4 I 20 C 0 s calJac3.chr2 204175769 61 + 204313951 CCGGTTGACCTTGGGCAAACACCACTCCTCCCCGAGTCCACGAGCCAGGCACTGAGGCGGG i calJac3.chr2 C 0 C 0 s mm10.chr13 74349957 38 + 120421639 CCCTTTAACCTTGGAGAA---------CTTCGCTAGACCA--------------AGACGGG i mm10.chr13 C 0 C 0 e canFam3.chr34 11964213 431 + 42124431 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1246094.000000 s hg38.chr3_KI270937v1_alt 136629 742 + 165607 G-GGCTACCTCAGCCCGCGAGGTCGCCGGACCCCAGGCCCGGA-CCAAAGCGGCGGAGGGGACGCCC------AGCAAGCCCGCGGGGTCGCGACCTTCACCGGGACGCGGCCT----ACCTGCTAAGGACCGAGCTCCCCAGGCCCCCGAGT----ACACTCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGGGC--------AGGGGGCGCGGGCACCCGGCGCCCGC-TCCGCTCGGACCCGCTGGGGAccgtcccgctcctaccgccgcctcgccccccgcctgccct-----gcccCGGTCCGCGGCAGGGACTCACCGCCTTGGCCAGCGCCAGCGCCAAGCGCCGAGCGCTTGGCAACCGCGACAGGCCCCGGACCCCCGACACGTCTGTAGTCGCCGCCGCGCAGTCCCGCCAGTCCCTGCG-CAGACTGCG----------------------------------------------CCTGCGCACC-------------ACGGCCGGGTCAAG-GCGGGGCGCTAGTGGGGGACATCGCGCCTGCGCACCACGACACGCCC-GGGC--AGGGGTCTAATGGGCGGGGACGCCGCGCCTGCGCAAAGCGGACCCGCGGACGGTGGCGCTG--GGTGGCCACGGAGGTCCCGCGCTCCCCGACCGAGATAGGG---------------CGGGCCCTATTTCGGGGAGATGTTGggcaccaacattttttaaagccc--cgtgggtggttcTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACCTCAGGGAATGGGGTCGAAGGGGCGGCGCTCGT s panTro4.chr3 201671671 743 + 202329955 G-GGCTACCTCAGCCCGCGAGGTCGCCGGACCCCAGGCCCGGA-CCAAAGCGGCGGAGGGGACGCCC------AGCAAGCCCGCGGGGTCGCGACCTTCACCGGGACGCGGCCT----ACCTGCTAAGGACCGAGCTCCCCAGGCCCCCGAGT----ACACTCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGGGC--------AGGGGGCGCGGGGACCCGGCGcccgc-tccgctcggacccgctggggaccgtcccgctcctactgccgcctcgccccccgcctgccct-----gccccggtccgcGGCAGGGACTCACCGCCTTGGCCAGCGCCAGCGCCAGGCGCCGAGCGCTTAGCAGCCACGACAGGCCCCGGACCCCCGACACGTCTGTAGTCGCCTCCGCGCAGTCCCGCCAGTCCCTGCG-CAGACTGCG----------------------------------------------CCTGCGCACC-------------ACGCCCGGGTCAAGAGAGGGGCGCTAGTGGGGAACATCGCGCCTGCGCACCACGACACGCCC-GGGC--CGGGGTCTATGGGGCGGGGACGCCGAGCCTGCGCAAAGCGGACCCGCGGACGGTGGCGCTG--GGTGGACACGGAGGTCCCGCGCTCCCCGACAGAGATAGGG---------------CGGGCCCTATTTCGGGGAGGTGTTGGGCACCAACATTTTTTAAAGCCC--CGTGGGTGGTTCTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACTGCAGGGAATGGGGTCGAAGGGGCGGCGCTCGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2460925 788 - 202140232 G-GGCTACCTCAGCCCGCGAAGTCGCCGGACCCCAGGCCCGGA-CCAAAGCGGCGGAGGGGACGCCC------AGCAAGCCCGCGGGGTCGTGACCTTCACCGGGACGCGGACT----ACCTGCTAAGGACCGAGCTCCCCAGGCCCCCGAGT----ACACCACGCGG----CTCCCCCTCGCACCGTCCCAGGGCTCTCCCAGCCCCTTCCCGATCCCCGGGC--------AGGGGGCGCGGGGACCCGGCGcccgc-tccgctcggacccgctggggaccgtcccgctcctaccgccgcctcgccccccacctgccctgccccgccccggtccgccGCAGGGACTCACCGCCTTGGCCAGCGCCAG------GCGCCAACCGCTTAGCAGGCGCGACAGGCCCCGAACCCCCGATATGTCGGTAGTCGCCGCCGCGCAGTCCCGCCAGTCCCTGCG-CAGACTGCGGCTGCGCAACACACCCCGGTAGAGCTGGGGGAGGGGGGAGACTCGACCCGCGCACC-------------ACGCCCGGGTCAAGGGGGGGGCGGTATTGGGGGACACCGCGCCTGCGCACGACGCCACGCCC-GGAC--CAGGGTCTAAGGGGCGGGGGCACCGCGCCTGCGCAAAGTGGACCCGCGGACGGTGCCGTTG--GGTGGACACAGAGGTCCTGCGCTCCCCGACCGAGATAGGG---------------CGGGCCCTatttcggggaggtgttgggcaccaacattttttaaagccc--cgtgggtggttcTCCGGGATCTCCCAGACCGAGAGGGCCTGAACGTCCAGACCACAAGGAATGGGATCCAAGGGGCGGCGCTCAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1328399 779 + 181584905 G-GGCCACCTCAGCCCGCGGGGTTCCCGGA-CCCAGGCCCGGA-CCAAGGCGGCAGAGCGGACAACC------AGCAAGCCCGCGGGGTCGTGACCTTCACCGGGACGCGGACT----ACCTGCTAAGGACCGAGCTCCCCGGTTCCCCGAGT----CCGCCCCGCGG----CTCCGCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATccccggaccgggggcgcgggggcgcggggacccggcgcccgC-TCCGCTCGCACCCGCTGGGGACCGTCCCGCTCCTACCGCCGCCTCGGCCCCCGCCTGTCCC-----GCCCCGGTCCGCGGTACGGACTGACCGCCTTGGCCAGCGCCAG------GCGCCGAGTGCTCAGCAGCCGCGACAGTCTCCGGACCCCCGACATGACTGTTGACGCCGCCACGCAGCCCCGCCAGTCCCTGCG-CAGACTGCGCCTGCGCACCACGCCGGGGTCGCGCTAGGGGGAT------ATCGCGCCTGCGCACC-------------ACGCCGGGGTCGA--GCGGGGCGGTAGTGGGGGACATCGCGCCTGCGCACTACGTCACGCCC-GGGC--GGGGGCT----GAGTGGGGGCGCCGCGCCTGCGCAAAGCGGACTCGCGGACGGAGGCGTTGAGGGGGGACGCGGAGGTCCTGGGCTCCCCGACCGAGGTAGAG---------------CGGGCCCTATTTTGGGGAGGTGTTGGGCACTAACA-TTTTTAAAACGC--CATGGGTGGTTCTGCGGGATCGCCCAGACAGAGGGCACCTGAACGTCCAGACCACAGGGAATGGGGTCGGAGGGGCTGCGCTCGC i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1304548 730 + 174439528 G-GGCCACCTCAGCCCGCGGGGTCCCCGGA-CCCAGGCCCGGA-CCGAGGCGGCAGAGCGGACGACC------AGCAAGCCCGCAGGGTCGTGACCTTCACCGGGACGCGGACT----ACCTGCTAAGGACCGAGCTCCCCGGTTCCCCGAGT----CCGCCCCGCGG----CTCCGCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATTCCGGGAC--------AGGGGGCGCGGGGACCCGGCGCCCGC-TCCGCTCGCACCCGCTGGGGACCGTCCCGCTCCTACCGCCGCCTCGGCCCCCGCCTGTCCC-----GCCCCGGTCCGCGGTACGGACTGACCGCCTTGACCAGCGCCAG------GCGCCGAGTGCTCAGCAGCCGCGACAGCCCCCGGACCCCCGACATGACTGTTGACGCCGCCACGCAGTCCCGCCAGTCCCTGCG-CAGACT----------------------------------------------GCGCCTGCGCACC-------------ACGCCGGGGTCGA--GCGGGGCGGTAGTGGGGGACATCGCGCCTGCGCAGCACGTCACGCCC-GGGC--GGGGGCT----GAGTGGGGGCGCCGCGCCTGCGCAAAGCGGACCCGCGGACGGAGGCGTTGA-GGGGGACGCGGAGGTCCTGGGCTCCCCAACCGAGGTAGTG---------------CGGGACCTATTTCGGGGAGGTGTTGGGCACCAACA-TTTTTAAAGCGC--CGTGGGTGGTTCTGCGGGATCGCCCAGACCGAGGGGGCCTGAACGTCCAGACCACAGGGAATGGGGTCGGAGGGGCTGCGCTCGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1421210 780 + 91010382 G-AGCCACCTCAGCCCGCGGGGTCCCCGGA-CCCAGGCCCGGA-CCAAGGCGGCAGAGGCGACGACC------AGCAAGCCCGCGGGGTCGTGACCTTCACCGGGACGCGGACT----ACCTGCTAAGGACCGAGCTCCCCGGTCCCCCGAGT----CCGCCCCGCGG----CTCCCCCTCGCACCGGCCCAGGGCTCTCCCAGCCCCTTCCCGATcccgggaccgggggcgcggggccgcggggacccggcgcccgc-tccgctcgcatccgctggggaccgtcccgctcctaccgccgcctcggccccctcctgtccc-----gccccggtccgcGGTACGGACTGACCGCCTTGgccagcgccag------gcgccgagtgctcagcagccgcgacagcCTCCTGACCCCCGACATGACTGTTGACGCCGCCACGCAGTCCCGCCAGTCCCTGCG-CAGACTACGCCTGCGCACCACGCCGGGGTCGCGCTAG------GGGGATATCGCGCCTGCGCACC-------------ACGCCGGGGTCGA--GCGGGGCGGTAGTGGGGGACATCGCGCCTGCGCACTACGTCACGCCC-GGGCGGGGGGGCT----GAGTGGGGGCGCCGCGCCTGCGCAAAGCGCACCCGCGGACGGAGGCGTTGC-GAGGGACGCGGGGGTCCTGGGCTTCCCGAGCGAGGTAGAG---------------CGGGCCCTATTTCGGGGAGGTGTTGGGCACTAACA-TTTTTAAAGCGC--CATGGGTGGTTCTGCGGGATCGCCCAGACAGAGGGGGCCTGAACGTCCAGACCACAGGGAATGGGGTCGGAGGGGCTGCGCTCGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204175830 775 + 204313951 GTGGCTACCTCAGCCCGCGGGGTCCCCGGACCCCAGGCCCGGA-CCAGTGCGGCGGAGGGGACCCCCGGGCCGAGC-AGCCCGTGGGGTCGTGACCTTCACCGGGAGGCGGACG----ACTTGCTAAGGACTGAccccccccggcccccgggt----ccgccccgcTG----CTCCCCCTCGCACCGGCCCAGGGCTCTCTCAGCCCCTTCCGGATCCCCGGGC--------AGGGGGTGCGGGGACCCGGCGCTCGA-TCCGCTCGGACCCGCTGTGGACCGACCCGCTCCTACTGCTGCCTCGGCCCCTGCCTGCCCC-----GCCCCGGTCCGCGGCACGGACTCACTGCCTTGGCCAGCGCCAG------GCGCTGGGCGCTCAGCAGCCGTGACAGCCTCCGGACCCCCGACATGTCAGTT---GCAGCCGTACTGTCCCGCCAGTCACCGCG-CAGACTGCGCCTGCGCACCACACCGGGGTCGCGCTGGGG-------------------GGATACCGCGCCTGCGTACTACGCCGGGGTCCA--GCTGGGCGGCCGCGGGGGACGTCGCGCCTGCGCACCACGCCACACCCTGGGC--GGGGGCT----GAGTGGGGGCGCCGCGCCTGCGCAAAGCGGACTTGCGGACGGTGGCGCTGG-GGGCGACACCGAGGTCCCGCTTTCTCGGACTGAGGTAGGG---------------CGGGCCCTGTTCTGGGGAGGTGTCGGGCACCAACA-TTTTTAAAGCCC--CGTGGATGGTTCTCCGGGATCGCCCAGATCGAGAGGGCCTGAACGTCCAGCCCTCAGGGAATGGGGTCGGAGGGGCGGCGCTTGT i calJac3.chr2 C 0 C 0 s mm10.chr13 74349995 526 + 120421639 G-----------------AAGG---CCAGACTCCACGCCCG---------------------CGACC---------------TCGGGGTCGTGACCTTCGCCGGAAAGCAGTCG----GCTT---------------------------------------------------------------CGGCCCA---------CTGCACCTTCCCAGACTCAGGCC--------AACTCGGGTGGAATCGTGGCG---------------------------------CACTCCTAGCG---------------CCTGCCAT------------TTCGTGGCACTAACTCACCGCCCCAGTTAACGCCAA------GCGCCGCCCGCGAAGAAGCCTCGAAACTGCGCCAACCCCGGCCATGTCTG--------------CCTTCCCGCAAGCCCCAGCGACAGACTGCG----------------------------------------------CTTGCGCACC-------------------GAGTCGCGCGGGTGTCGGGCTTGGAAGATTCTGCGCCTGCGCAACACGCCCCTCCT-GGCT--CGCGT------GAGTGGTGGTGC---GCCTGCGC--------CCTGTAAAC-GCGGCGGTG----------------------GCAACACGTCTGAGGTAGGGTGGCAGCAACGCTGATGGGCTCTGCTCCAGGGGTAAGTGAGGTGCCAATG-TCTTTAAAGTGCTTCTCGGGTGGTTCTT---GTTTGCCAAAACAGAGAGGGTCGGATGATCTGGAGAGATGGAAGTAGGGTCCT-GGGGCGGAGATCGC i mm10.chr13 C 0 I 218 s canFam3.chr34 11964644 598 + 42124431 G-AGCGACCGTAGCCCGCGAGGCCCCCGGCCCCCAGGCCTGGATCCCAGGCAGCGGAAGCGTCCCCG------GGGCGGCACGCGGGGTCATGACCTTCACAGGGACGCAGACCCGCGGGCTCCTGGAAACTG---CCCGCTGCCCTGCGGGTCGCCCCACCCTCCGGCGACCTCCTCCCCGCACCCGCCCG---------CAGACCCTCCCCAggccggggccctg-----cgggcggggcggggcggggcACTCGCGTCCGCTCGGGCCCGC-GGAGACCGTCCTGCGCC------CCCCTCGATCCCCGC--ACCCT-----G-CCCGCTCCGCGGCGAAGACTCACTGCTCTGGTCAGCGCCAG------GCGCCGGGCGCCCAGCAGCCGAGACACCGCCCGGACCCCCGACATGTCTGTC--CTCCACCGCGCTGTCCCACCAACCCCCGCGCCACACTGCG----------------------------------------------CCTGCGCATC-------------TAGTC-GCGCCCAGCCTAGGACGC-----GGGGACACCGCGCCTGCGCACCACGCCGCGACC-CCGC--------------GGTGGGGGCATCGCGCCTGCGCACA--GGGTCCGCAGACCGTGCCGCTG--AGGG----------------------CATCCGGAGCCGAG---------------CGCTCCCC-------------------------------------TCC--CGGGGGTGAGTC--------------------GGGGGCC---------------------------------GGGCGGTGTTCG- i canFam3.chr34 I 431 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=402113.000000 s hg38.chr3_KI270937v1_alt 137371 251 + 165607 CCGCGGAGGTGGGCGGGAGCGGCCCGGGGCCTCCGGCCTCTAGAGAGCGGGAGTGACCCTCGGTTTCTGGCCTCCGAGG--GGCGGGAGCGATCCTCAGCCATGTCCCTAGTGTCTGGCTTccggctgatttttaaatttttggtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtggcctcaagcgatcctacctcctcggcctccccaagtgcggagattacagacagagccactgc s panTro4.chr3 201672414 251 + 202329955 CCGCGGAGGTGGGCGGGAGCGGCCCGGGACCTCCGGCCTCTAGGGAGCGGGAGTGACCCTCCGTTTCCGGCCTCCGAGG--GGCGGGAGCGATCCTCAGCCATGTCCCTAGCCTCTGGCTTccggctgatttttaaatttttggtagaggcgggatcttgctctgttgcccaggctggtctcgaacttgtggcctcaagcgatcctccctcctcggcctccccaagtgcggggattacagacagagccactgc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2461713 251 - 202140232 CCGCGGAGGTGGGCGGGAGCGGCCCGGGGCCTCCGGCCTCTAGTGAGCGGGAGTGACCGTCGGTTTCCGGCCTCCGAGGGAGGGGGGAGCGATCCTCAGCCATGTCCCCAGCCTCTGGCTTccggctgatttttaaattttttgtagaggcgggatcttg--ctgttgcccaggctggtctcgaacttctggcctcaagtgatcctccctcctcggcctccccaagtgcggagattacagacatagccactgc i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1329178 251 + 181584905 CCGCGGAGGTGGGCGGGAGCGACCCGGGGCCTCCGGCCTCTACTGAGCGGGAGTGACCCTCGGTCTCCGGCCTCCGAGG--GGCGGGAGCGATCCTCAGCCATGTCCCTAGCTTCTGGCTTccggctaatttttaaattttttgcagtggcgggatcttgctgtgttgcccgggctggtctcaaactcttggcctcaagcgatcctccctcctcggcctccccaagtgcggggattaggggcggagccaccgc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1305278 251 + 174439528 CCGCGGAGGTGGGCGGGAGCGACCCGGGGCCTCCGGCCTCTACTGAGCGGGAGTGACCCTCGGTCTCCGGCCTCCGAGG--GGCGGGAGCGATCCTCAGCCATGTCCCTAGCGTCTGgcttccggctaatttttaaattttttgtagtggcgggatcttgctgtgttgcccgggctggtctcaaactcttggcctcaagcgatcctccttcctcggcctccccaagtgcggGGATTAGGGGCGGAGCCACCGC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1421990 251 + 91010382 CCGCGGAGGTGGGCGGGAGCGACCCGGGGCCTCCGGCCTCTACTGAGCGGGAGTGACCCTCGGTCTCCGGCCTCCGAGG--GGCGGGAGCGATCCTCAGCCATGTCCCTAGCTTCTGGCTTccggctaatttttaatttttttgtagtggcgggatcttgctgtgttgcccgggctggtctcgaactcttggcctcaagcgatcctccctcctcggcctccccaagtgcggggattaggggcggagccaccgc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176605 245 + 204313951 CCGCGGGGTTGGGCGGGAGCTGCCTTGGGCCTCCGGCCTCTAGTGAGCGGGAGTGACCCTCGGCCTCCGGCCTCGGAGG--GGTGGGAGTCACCCTCATTCATGTCCCCAGCCTCTGGCTTccggctaatttttaaattttttgtagaggcgggctctcgctttgttgccc-----ggtctcgaactcttggcctcaagcgatcctccctcctctgcctcctaacatgtgg-gattacgggcggagccacagc i calJac3.chr2 C 0 C 0 s canFam3.chr34 11965242 133 + 42124431 ----GTGGGGGGCCAGGGGTAGGTCAGGGC---------CTAGGGAAAAG---------------TCGGGCGGACTAGG--GGTGGG--------------------------TCAGGGGTCGGAGTAG--------------GTCAGGGCG-----------------CCGGGCGGG------------------------------CGCTCCGGTCCACCC---TGCGGGGGCCGCGGCGGTGGACACGGG i canFam3.chr34 C 0 C 0 e mm10.chr13 74350521 218 + 120421639 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=800023.000000 s hg38.chr3_KI270937v1_alt 137622 434 + 165607 ------gcacggcc-GTGGTCAGCTTTGAAAGCTGGGTAGATCCCTTTGGCTCATACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGATAGTATTTTAATATTTCTAGTGTGTCTTTTTCTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGGCATGAAAAATAAACCAATAATCATTAGTAA----GTATGTTTCCTGTCTTTTCACTTTA-------TTAAAATCTTCGTCTT---------------------------------GTGCATCATG---TTTA-----ACAAT------T-----TTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttactgatatttgggttgtttcc-catttttgctctt----aataacaccatacagaacatatttgtgaccataactt---tctctttaggatta------tttttttaga--tgtatg---ccccagac--------------gtgacctttattggcttgcagggaatgaacatCATACCT s panTro4.chr3 201672665 439 + 202329955 ------gcatggcc-GTGGCCAGCTTTGAAAGCTGGGTAGATCCCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTCTGCTTCTGGTTCAGATAGTATTTTAATATTTCTAGTGTGTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGGCATGAAAAATAAACCAATAATCATTAGTAA----TTATGTTTCCTGTCTTTTCACTTTA-------TTAAAATCTTCGTCTT---------------------------------ATGCATCACG---TTTA-----ACAAT------TTTGAGTTATTTTAGTAAATTTG-------CAAG-GGTccagtcccattttattgatatttgggttgtttcc-catttttgctctt----aataacaccatacagaacatatttgtgaccataactt---tctctttaggatta------tttttttaga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatgaacatCATACCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2461964 442 - 202140232 ------gcacggcc-GTGGTCAGCTTTGAAAGCTGGGTAGATCCCTTTGGCTTATACGCCTGTCTGCTACCTTACCCTGATTTTGCTTCTGGTTCAGATAGTATTTTAATATTTCTAATGTGTCTTTTTCTAAGGTGTCTGAAATATTTTTGTGGAATGAAGTGGCATGAAAAATAAACCAATAATCATTAGTAA----TTATGTTTCCTGTCTTTTCACTTTAAATTAT-TAAAAATCTTCGTCTT---------------------------------GTGCAT---G---TTTA-----ACAAT------TTTCAGTTATTTTAGTAAATTTG-------CAAG-GGTTcagtcccattttattgatatttgggttgtttcc-catttttgctctt----aataacaccgtacacaacatatttgtgaccataactt---tatcttaaggatct------tttttttaaa--tgtatg---ccccagac--------------gtggcctctattggcttgcggggaatgaacatAATACCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1329429 448 + 181584905 ------gcagggcc-GTGGTCAGCTTTTAAAGATGCGTAGATCCCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGAGAGTATTTTAATATTTCTAGTGTGTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGGCATGAAAAATAAACCAATAATCATTAGCAA----TTTTGTTTCCTGTCTTTTCACTTTAAATTA--TTAAAATCTTTCTCTT---------------------------------ATGCGAGATG---TTTA-----ACAAT------GTTGAGTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttactcttaataaataacaccgtacagaacatatttgtgaccgtaactt---catctttaggatta------ttttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1305529 443 + 174439528 ------GCAGGGCC-GTGGTCAGCTTTTAAAGATGCGTAGATCCCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGagagtattttaatatttctagtgTGTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGGcatgaaaaataaaccaataatcATTAGTAa----ttttgtttcctgtcttttcactttaaatta--ttaaaatctttCTCTT---------------------------------ATGCGAGATG---TTTA-----ACAAT-----------GTTATTTTAGTAAATTTG-------CAAT-GGTTCAGTCCCATTTTATTGATATTCGggttgtttcc-catttttactctTAATAAATAACACCGTACAGAACATATTTGTGACCGTAACTT---CATCTTTAGGATTA------TTTTCTTGGA--TGTATG---CCCCAGAC--------------GTGGCCTTTATTGGCTTGCAGGGAATGGACATAGTACct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1422241 443 + 91010382 ------gcagggcc-GTGGTCAGCTTTTAAAGGTGCGTAGATCCCTTTGGCTTATACGCCTTTCTGCTAGCTTACCCTGATTTTGCTTCAGGTTCAGAGAGCATTTTAATATTTCTAGTATGTCTTTTTGTAAGATATCTGAAATCTTTTTGTGGAATGAAGTGGCATGAAAAATAAACCAATAATCATTAGTAA----TTTTGTTTCCTGTCTTTTCACTTTAAATTA--TTAAAATCTTTCTCTT---------------------------------ATGCGAGATG---TTTA-----ACAAT-----------GTTATTTTAGTAAATTTG-------CAAT-GGTTcagtcccattttattgatatttgggttgtttcc-catttttactcttaataaataacaccgtacaaaacatatttgtgaccgtaactt---catctttaggatta------ttttcttgga--tgtatg---ccccagac--------------gtggcctttattggcttgcagggaatggacatAGTACCT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204176850 445 + 204313951 ------gcgccgcc-TGGGTCAGCTTTGAAAGCTGC---GATCCCTTTGGCTTATACGACTTTCTGCCAGCTTACCCTGATTTTGCTTCTGGTTCGGATAGTGTTTTAATTTTTCTAGTGTGTCGTTTTGTAAAATACCTGAGATCTTTTTGTGGAATGAAGTGGCATGAAAATTAAACCAATAATCATTAGTAA----TTCTGTTTCCTGCCTTTTCACTTTAAAGTA--TTAAAATCTTCCTATT---------------------------------GTACATAATGTTTTTTA-----ACTGT------TTTGAGTTATTTTAGTAAGTTTT-------CAAT-GATTcagtcccattttgttgatatttgg---gtttcc-catttttgctgctaataaataacaccataaagaacatatctgtgaccataactt---tatctttagaatta------tttccttaga--tgcatg---ccccagat--------------gtggcatttattggCTTGCAGTTAATAAACATAATGCCT i calJac3.chr2 C 0 C 0 s mm10.chr13 74350739 415 + 120421639 ------GCCCGGCCTGTTGTCATC-CTGAAAGCTGCTTAGATC---GTGGCTAGCATCCCATATTGCAAACGCGCTCTCATTTGA--TCACTTTCAGATAGTTTTTCTATTTTTCTAGTGAGT-----------ATAGCTGAAATG-TTCGGTGGAATTAAATAGCATAAAAAGTAAACCAATAATC----GTAA----T--TGTTTCCTGAATTTTCAGTTAATATTAGATTAAGGTTTTCCTCTT--------------------------------GGTGCACAATC---TTTATGACCATTAT------TTTGAATTGTT----TAAGTTTA-------CAAT-GAACCGTTCCCATTTTATT--TCTTTG--------------TTTTTTTATTAATAAATAAGGAAATATGGAATATATTCATGCACAACACTT---TATATTTTGAATTA------TTTCCTTGAA-CTTTATA---ACCCCAAA--------------ATGGATGTTGTTGGTGCAGAGGAAATAAATATGACAGCT i mm10.chr13 I 218 N 0 s canFam3.chr34 11965375 502 + 42124431 CCGGTGACTCGGTG-AGGGTCGGC---------------GACC---GGGGCTTGTCCTCCCTGACGCGCGC-------GACCTCGCCGCTGGTCCACCGAGCGTCT---TTCCTTTGGGGCGTGCTTATGTAAGGTACCCGGATTC-TTTTGTGGGACTGAGTGGCATGGGAAAGAAACCAAGAGTTGTAAGTACCGTTTTCACTTTCCTGTG-TTTCGTGTTGTATTA--TTACGATCTTCCTCCTAATCCTCCTAATCCAGTGCTATGCAGCTTATAGGTGCACAGCT---GTGT-----GCAATGTAATCTTAGAATTATTTTAATGAGTTAGTTTATGACAATCCATCCACTCCTATTTTATTGATGTTTAGGTGGTTTCCAAATCTTTGCCAATACTAAAGAAGCCTGTGAAGACTCTAACCATG--TATAATTTGTCTTTATTTACGATTAGGTTGCTTTTCTTGGAATTGTATGTTTCCTCAGGCCCAGTGTCCTCCAAGTGGACTTTACTGGCTTGGAGGAAATGAGCACTCTTCTT i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=82810.000000 s hg38.chr3_KI270937v1_alt 138056 66 + 165607 CCTAGACTTATTTTTTTAAAGTTACGCTGTT--TTAGTCCTGGGTTAGT------------TACCTAAttttgtttggtt s panTro4.chr3 201673104 66 + 202329955 CCTAGACTTATTTTTTTAAAGTTACGCTGTT--TTAGTCCTGGGTTAGT------------TACCTAAttttgtttggtt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2462406 64 - 202140232 CCTAGACT--TTTTTTTTAAGTTACGCTGTT--TTAGTCCTGGGTTAGT------------TATCTAATTTTGTTTGGTT i ponAbe2.chr3 C 0 M 917 s macFas5.chr6 1329877 67 + 181584905 CCTAGAC---ATTTTTTTTAGTTATGCAGTT--TTGGTGCTGGGTGAGTTATC--------TATCTAAttttgttttgtt i macFas5.chr6 C 0 I 5 s papAnu2.chr6 1305972 69 + 174439528 cctagactt-tttttttttagttatgcAGTT--TTGGTGCTGGGTGAGTTATc--------tatctaattttgttttgtt i papAnu2.chr6 C 0 I 5 s chlSab2.chr4 1422684 67 + 91010382 CCTAGAC---TTTTTTTTTAGTTATGCAGTT--TTGGTGCTGGGTTAGTTATC--------TATCTAAttttgttttgtt i chlSab2.chr4 C 0 I 5 s calJac3.chr2 204177295 77 + 204313951 CCTAGACAT-TTTTTTGAAAGTTATGCAGTT--TTGGTCCTAGGTTAGTTATCTATTTttttgttttgttttgttttgtt i calJac3.chr2 C 0 C 0 s canFam3.chr34 11965877 62 + 42124431 TGCAGACT--TACCTTGAGAGGTTTGCAGTTGAGTACTTTCAGAT----------------GACTTAATTTTTTATTGTC i canFam3.chr34 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1911.000000 s hg38.chr3_KI270937v1_alt 138122 1 + 165607 t s panTro4.chr3 201673170 1 + 202329955 t i panTro4.chr3 C 0 C 0 s macFas5.chr6 1329949 1 + 181584905 t i macFas5.chr6 I 5 C 0 s papAnu2.chr6 1306046 1 + 174439528 t i papAnu2.chr6 I 5 C 0 s chlSab2.chr4 1422756 1 + 91010382 t i chlSab2.chr4 I 5 C 0 s calJac3.chr2 204177372 1 + 204313951 t i calJac3.chr2 C 0 C 0 s canFam3.chr34 11965939 1 + 42124431 T i canFam3.chr34 C 0 N 0 e ponAbe2.chr3 2462470 917 - 202140232 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=115316.000000 s hg38.chr3_KI270937v1_alt 138123 97 + 165607 gagacggagtttcgctcttgttgcccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagagattctcccgc s panTro4.chr3 201673171 97 + 202329955 gagacggagtttcgctcttgttgcccaggctggagtggaatggcgggatctcggctcaccgcaacctctgcctccagggttcaagagattctcccgc i panTro4.chr3 C 0 C 0 s macFas5.chr6 1329950 97 + 181584905 gaaatggagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccacctccagggttcaagagattctcccgc i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1306047 97 + 174439528 gaaatggagtttcgctcttgttgcccaggctggagtgcaatggtgcgatctcagctcactgcaacctccgcctccagggttcaagagattttcccac i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1422757 97 + 91010382 gaaatggagtttcactcttgttgcccaggctggagtgcaatggtgcgatctcagcttactgcaacctccgcctccagggttcaagagattttcccgc i chlSab2.chr4 C 0 I 12032 s calJac3.chr2 204177373 96 + 204313951 gagatggagtttagctcttgttg-caaggctggagtgcaatggcatgatcttgtgtcactataacctccacctccagggttcaagagattctcctgc i calJac3.chr2 C 0 T 47777 e ponAbe2.chr3 2462470 917 - 202140232 M e nomLeu3.chr11 2900956 4012 - 123690457 I a score=19684.000000 s hg38.chr3_KI270937v1_alt 138220 61 + 165607 ggagcttacagtgagcggagatggcgccacttcactccagcctgggcaacagagcaagact s panTro4.chr3 201673268 61 + 202329955 ggagcttacagtgagcggaganggnnncnnttcactccagcctgggcaacagagcaagact i panTro4.chr3 C 0 C 0 s macFas5.chr6 1330047 52 + 181584905 ---------ggacagcggagatcacgccactgccctccagcctgggcaacagagcaagact i macFas5.chr6 C 0 C 0 s papAnu2.chr6 1306144 52 + 174439528 ---------ggacagccaagatcacaccactgccctccagcctgggcaacagagcaagact i papAnu2.chr6 C 0 C 0 e ponAbe2.chr3 2462470 917 - 202140232 M e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1422854 12032 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=499.000000 s hg38.chr3_KI270937v1_alt 138281 2 + 165607 AT s panTro4.chr3 201673329 2 + 202329955 ct i panTro4.chr3 C 0 C 0 s macFas5.chr6 1330099 2 + 181584905 gt i macFas5.chr6 C 0 N 0 s papAnu2.chr6 1306196 2 + 174439528 gt i papAnu2.chr6 C 0 N 0 s chlSab2.chr4 1434886 2 + 91010382 AT i chlSab2.chr4 I 12032 C 0 e ponAbe2.chr3 2462470 917 - 202140232 M e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=16480.000000 s hg38.chr3_KI270937v1_alt 138283 31 + 165607 ATTGCTTTAATTTACTCTGCCGGCTATCTGG s panTro4.chr3 201673331 31 + 202329955 atTGCTTTAATTTACTCTGCCGGCTATCTGG i panTro4.chr3 C 0 C 0 s papAnu2.chr6 174359960 31 - 174439528 ATTGCTTTAAGTTACTCTGCCAGCTATCTGG i papAnu2.chr6 N 0 C 0 s chlSab2.chr4 1434888 31 + 91010382 ATTGCTTTAATTTACTCTGCCAGCTATCTGG i chlSab2.chr4 C 0 I 16 e ponAbe2.chr3 2462470 917 - 202140232 M e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=242819.000000 s hg38.chr3_KI270937v1_alt 138314 1007 + 165607 AGAGATGCAACCTCATCAGCAGAAATTATTTCCACCCTGCTGCTTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCACCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTGTGTCAACTCAAAGT-CAATGCGCTTATGAAATACTTTTTGTGGTTTTTTTCTTAATTTTAAGAGGTTTTTTTTTAAAATATGTTTTTGTTTCATGGAGGCGACACCCTCTGTCTCTGAGTTGTGGGAGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCCGTACCAGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCATCGCCCCAGAGAGCTCCTCCATTCGCccctccacccgtagcccctcgaaaccactgccctgctccccgacacggta-cactgtcttctccaagatgtcatgtgttggcatcctttggcctgtgcccaccgaaactagcttccttcaacgggcatgtagcctgggagacctggggca-tttgggtgcatctttccactgctggttggtgccccctgtgtggaagcatccgcgttagttcacgccttctcctgctcctgccgacggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtgcaggtttgtgtgtgcacgtttaagttttcccttgggggacatttcagcagtggggttgctggatgacatggtaaggatgtgcttaacttcgtaagaaactccaggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcatcactagaacctgggttggcccatgggttttgtctgtttttagccattttaatggatttgcagaggtactgctgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaat s panTro4.chr3 201673362 1004 + 202329955 TGAGATGCAACCTCATCAGCAGAAATTATTTCCA-CCTGCTGCTTTTTAAA--TGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCACCCTCTCCCTCCGGGATTGCCAAGCCTGTGGTTTCAGTTCCATGCTCCCAGGTAGATTATGTCAACTCAAAGT-CAATGTGCTTATGAAATACTTTTTGTGG-TTTTTTCTTAATTTTAAGAGGTTTTTTTTTAAAATATGTTTTTGTTTCATGGAGGCGACACCCTCTGTCTCTGAGTTGTGGGAGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTTTGCTGTA-CAGCCCCTCAGCCGCAGCAGCCCACAGTGAGGTGCAGGTGCTCACGCCATCGCCCCAGAGAGCTCCTCCATTCGCccctccacctgtaacccctcgaaaccactgccctgctccccgacacggta-cactgtcttctccaagatgtcatgtgttggcatcctttggcctgtgcccaccgaaactagcttccttcaccgggcatgtagcctgggagacctggcgca-tttgggtgcatctttccactgctggttggtgtcccctatgtggaagcatccgcgttggttcacaccttctccagctcctgccgatggacattttgttttcttccagttattggcaatgaggaatgaggcctaaacacttgtgtacaggattgtgtgtgcacgtttaagttttcgcttgggggacgtttcaggagtggggttgctggatgacatggtaaggatgtgcttaacttcgtaagaaactcccggaccactttccagcatggcgggacccctcccattcccactgcagcttatgagggtcccagttcctctgcatcatcactagaacctgggtcggcccatggttcttgtctgtttttagccattttaatagatttgtagaggtactgctgactggcatttctccagcatctctatgatgttgagcctctttctcgggcaat i panTro4.chr3 C 0 C 0 s papAnu2.chr6 174359991 982 - 174439528 GGAAATGCAACCTCATCAGCAGAAATTATTTCCTCCCTGCCACTTTTGAAATCTGTTATTTCCTATAGCCAGGTACTGAGCCCTTCAATTGAGGTCTAAACCCTCCACCCTCTCCCTCCGGGGTCGCCAAGCCAGTGGTTT--GTTCCATGCTCCCAGGCAGATTGTGTCAACTCAAAGTCCAACGTGCTTAAGAAATA-----------------CTTAATtttagaaggtttttttttttttaatgtttttgtttcatgGAGGTGACACCCTCTGTCTTTGACTTGTGGGCGCCTTCCTCCTTCAGTCTGCATGTACTGAAGCCAGTGTCTGCTGTA-CAGCCTCTCAGCC---GCAGCCCATGGTGAGGTGCAGGTGCTCA-GCCTTTGCCCCAGAGAGCGCCTCCATTTGCCCCTCCACCCGTAGCCCCTCGAAACCACTGCCCTGCTTCCCAACACGGTAGCACTGTCTTCTCCAAGGTGTCATGTGGCGGCATCCTTTGACCTGTGCCCACCAAAACTAGCTTTCTTCACCAGGCATGTGGCCTGGGAGACCTGGGGCATTTTGGGTGCATGTTTCCACTGGTGGTTGGTGCCCCCTGTGTGGAAGCATCCGCGCTGGTTCATGCCTT------CTCCTGCCGATGGacaatttgttttcttccagttATTGGCAATGAGCAATGAGGCCTAAACACTTGAGTGCAGGTTTGTGTGTGCACATTTAAGTTTTCTCTTGGGGGAAATTTCaggagtggggttgctggatgACGTGGTAAGGATGTGCTTAACTCAATAAGAAACTCCCGGACCACGTTCCAGCATGGCGGGATCCCTCCCATTCCCACTGCCGCTTATGAGGGTCCCGATTCCTCTGCATCGTCACTAGAAGCTGGGTTGGCCcgtggtttttgtctgtttttagccattttaatagaTTTGCAGAGGTACTGTTGACTGGCATTTCTCCAGCATCTCTATGATGTTGAGCCTCTTTCTCGGGCAAT i papAnu2.chr6 C 0 C 0 e ponAbe2.chr3 2462470 917 - 202140232 M e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1434919 16 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=37949.000000 s hg38.chr3_KI270937v1_alt 139321 85 + 165607 atgccctccttataccttctttgatgaggcctccgttccaatattggccctctctttaatactggggtttttactttcttatggt s panTro4.chr3 201674366 85 + 202329955 atgccctccttataccttctttgatgaggcctccattcaaatatttgccctctctttaatactggggtttttactttcttatggt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2463400 84 - 202140232 Atgccctccttttacgtactttgatgaagactcctttc-gatatttgccctctctttaagactggggtttttaatttcttatagt i ponAbe2.chr3 M 917 C 0 s papAnu2.chr6 174360973 85 - 174439528 ATGCCCTCCTTATACCTTCCTTGATGAGGGCTCCATTAAAATATTTGCCTTCTCTTTAATACTGGGGTTTTTACTTTCTTATGGT i papAnu2.chr6 C 0 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1434919 16 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=261432.000000 s hg38.chr3_KI270937v1_alt 139406 326 + 165607 taagttttgatggttcttcatatatcctgcgtgccagtaggttgtgagacgtgtgattcacaaatgtttatttctagaccatagttcatgtttcattctctttggatttttatattgctttatagaattataattttaaatttatgactaaatttaatttgtcaatc--ttatgaatcatgcttttggtgtcatgtctaagaacttttcgcctaaccccaggccatacgaattttcccctgtgtttttagctaagggtttgatagcgttatgttctccatttaggcctttaataaatgttgaggaacattttgtGACCGCCATGGCCA s panTro4.chr3 201674451 328 + 202329955 taagttttgatggttcttcatatattctgcgtgccagtacgttgtgagatgtgtgattcacaaatatttttttctagaccatagtttgtgtttcattctctttagatttttatattgctttatagaattataattttaaatttatgactacatttaatttgtcaatcttttatgaatcatgcttttggtgtcatgtctaagaacttttcgcctaaccccaggccatacaaattttcccctgtgtttttacctaagggtttgatagcgttatgttctccatttaggcctttaataaatgttgagtaacattttgtgtCCGCCATGGCCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2463484 326 - 202140232 taagttttgatggttcttcttatattctgcgtgccactactttctgaaatgtgtgattcgcaattgtttttttctaaacaataatttgtgtttcattctctttagatttttatattgctttatagaattataattttaaatttatgactaaattgaatttgtcaatcttttatgaatcatgcttttggtgtcatgtctaagaacttttcatttaaccccaggccatacaaattttccc--gtgtttttacctaagggtttgatagcgttatgttctccatttaggcctttaataaatgttgagtaacattttgtgtcagctatgGCCG i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174361058 327 - 174439528 TAAGTTTTGACGGTTCTTCGTATATTCTGCGTGCCAGTACATTGTGAGATGTGTGATTaaccaatatttttttctagccCATAGTTtgcatttcattcttttaagatttttatattgctttatagaattataattttaaa-ttatgactaaatttaatttGTCAATCTTCTATGAATCATGCctttggtgtcatgtctaagaactTTTCACCTAACCCCAGGCCATACAaattttcccctgtgtttttaTCTAATGGTTTTATAGTGTTATGTTCTCCATTTAGGCCTGTGATAAATGTTGAGTAACATTTTGTGTCAGCCACGGCCA i papAnu2.chr6 C 0 I 27447 s chlSab2.chr4 1434935 327 + 91010382 taagttttgacggttcttcgtatattctgcgtgccagtacattgtgagatgtgtgattaaccaatatttttttctagcccatagtttgcatttcattcttttaagatttttatattgctttatagaattataattttaaa-ttatgactaaatttaatttgtcaatcttctatgaatcatgcctttggtgtcatgtctaagaacttttcacctaaccccaggccatacaaattttcccctgtgtttttatctaatggttttatagtgttatgttctccatttaggcctgtgataaatgttgagtaacattttgtgtcagCCACGGCCA i chlSab2.chr4 I 16 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1692.000000 s hg38.chr3_KI270937v1_alt 139732 3 + 165607 TAC s panTro4.chr3 201674779 3 + 202329955 TAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2463810 3 - 202140232 TAC i ponAbe2.chr3 C 0 C 0 s chlSab2.chr4 1435262 3 + 91010382 TAC i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e papAnu2.chr6 174361385 27447 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=6801.000000 s hg38.chr3_KI270937v1_alt 139735 41 + 165607 CTTTCTCCATCTCTCACGGTATCGTGGGCATTTGCAGCTCC s panTro4.chr3 201674782 41 + 202329955 CTTTCTCCATCTCTCACGGTATCGTGGGCATTTGCAGCTCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2463813 13 - 202140232 CTTTCTCCATCTC---------------------------- i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174388832 41 - 174439528 CTTTTTCCGTCTCTGACAGTATCTTGGGTGTCTGCAGCTCT i papAnu2.chr6 I 27447 I 3 s chlSab2.chr4 1435265 8 + 91010382 CTTTTTCC--------------------------------- i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=291.000000 s hg38.chr3_KI270937v1_alt 139776 3 + 165607 CAG s panTro4.chr3 201674823 3 + 202329955 CAG i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 2463826 0 - 202140232 C e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1435273 0 + 91010382 C e papAnu2.chr6 174388873 3 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=9559.000000 s hg38.chr3_KI270937v1_alt 139779 41 + 165607 TGCGCCGTGCTGTTCCCGTCTTCTTGGTCTGCTCCTCCTGT s panTro4.chr3 201674826 41 + 202329955 TGCGCCGTGCTGTTCCCGTCTTCTTGGTCCGCTCCTCCTGT i panTro4.chr3 C 0 C 0 s papAnu2.chr6 174388876 41 - 174439528 TGCCCTGTGCAGTTCCCGTCGTCTTGGTCCGCTCTTTCTGT i papAnu2.chr6 I 3 T 27532 e ponAbe2.chr3 2463826 0 - 202140232 C e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1435273 0 + 91010382 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=191.000000 s hg38.chr3_KI270937v1_alt 139820 2 + 165607 CA s panTro4.chr3 201674867 2 + 202329955 CA i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 2463826 0 - 202140232 C e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1435273 0 + 91010382 C e papAnu2.chr6 174388917 27532 - 174439528 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=145838.000000 s hg38.chr3_KI270937v1_alt 139822 191 + 165607 TACCTTTCTCCGTCTCTCACAGTATCGTGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTGTTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTTCAGGGCACGTCTTAGTGCTGGCACTGTCCTGGTCCATCG-GGGGTCCCATGAGCTTCTCCATGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC s panTro4.chr3 201674869 191 + 202329955 TACCTTTCTCCATCTTTCACAGTATCATGGGCGTTTGCAGCTCCCAGTGCCCCGTGCTGTTCCCGGCTTCTTGGTCCGCTCTTCCTGTGAGTTCCAGGGCACGTCTTAGTGCTGGCGCTGTCCTGGTCCATCG-GGGGTCCCATGAGCTTGTCCGTGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2463826 176 - 202140232 ----------------TCACAGTATCGTGGGCGTTTGCAGTTCGCAGTGCCCCGTGCTGTTCCCGTCTTCTTGGTCCGCTCTTCCTGTGAGTTTCAGGGCACGTCTTAGTGCTGGCGCTGTCCTGGTCCATCACGGGGTCCCATGAGCTTGTCCGTGTGGGAAGGTTGGGACTGTGATGTTGACGGGATGCC i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174361385 191 - 174439528 TACCTTTTTCCGTCTCTGACAGTATCTTGGGTGTCTGCAGCTCTCAGTGCCCTGTGCAGTTCCCGTCGTCTTGGTCCGCTCTTTCTGTGAGTTTCAGGGCGTGTCTTAGTGCTGACGCTGTCCTGGTCCATCAGGGGGTCCCATGGGCTTGT-CGTGTGGGGAAGTCGGGACTGTGATGTTGACGGGATGCC i papAnu2.chr6 T 27532 C 0 s chlSab2.chr4 1435273 181 + 91010382 -----------GTCTCTGACAGTATCTTGGGTGTTTGCAGCTCTCAGTGCCCCGTGCAGTTCCCGTCTTCTTGGTCCGCTCTTTCTGTGAGTTTCAGGGCGTGTCTTAGTGCTGACGCTGTCCTGGTCCATCAGGGGGTCCCATGGGCTTCTCCGTGCGGGAAAGTCGGGACTGTGATGTTGACGGGATGCC i chlSab2.chr4 C 0 I 131 e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=300.000000 s hg38.chr3_KI270937v1_alt 140013 1 + 165607 C s panTro4.chr3 201675060 1 + 202329955 C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464002 1 - 202140232 C i ponAbe2.chr3 C 0 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e chlSab2.chr4 1435454 131 + 91010382 I e papAnu2.chr6 174361576 0 - 174439528 C e nomLeu3.chr11 2900956 4012 - 123690457 I a score=50841.000000 s hg38.chr3_KI270937v1_alt 140014 65 + 165607 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG s panTro4.chr3 201675061 65 + 202329955 TGTGAGTCAGGAGGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCCGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464003 65 - 202140232 TGTGAGTCAGGACGAGGTGCTGACGGGGGTTTCCATGTAGGAGAGAGAGGCGTTTGGTTTTCCGG i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174361576 61 - 174439528 -GTGAGTC---GGGAGGTTCTGACGGGGGTTTCCATGTAGGAGAgagaggtgtttggttttccgg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1435585 62 + 91010382 TGTGAGTC--GGGGAGGTTCTGAC-GGGGTTTCCATGTAGGAGAGAGAGGTGTTTGGTTTTCTGG i chlSab2.chr4 I 131 C 0 e calJac3.chr2 204177469 47777 + 204313951 T e nomLeu3.chr11 2900956 4012 - 123690457 I a score=607968.000000 s hg38.chr3_KI270937v1_alt 140079 511 + 165607 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAATGCCACCAATGAGAAGGGCACGCACAGCAGGTCTCGGGGCCGCCCAGCCGTGTGGGAGACAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGACCAAGTCTTGCTCAAGAGGTGTGTTCAGCTGAGCCAACCATGGCAGAaatgcataagggagatcccacggttcctctg-tttaaatcccctgctaatcccaccagactcagagaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggcctcctcttggctctgattctctgcacccttctatcc----ctgtctcTTCTTCCATCA--GAGAGGAGATCCGGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCCCACATATAGTCACCGGAATGAATAGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAAGCAGGCCGGGCA---TGGTGGCTCA s panTro4.chr3 201675126 511 + 202329955 ATGGGGCAGACTTGAGAGGGGACAAACTTGAGAAATGCCACCAATGAGAAGGGCAGGCACAGCAGGTCTCGGGGCCGCCCAGCCGTGTGGGAGCCAAACGTGGATGTGTCAGTGGCCACGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGACCAAGTCTTGCTCAAGAGGTGCGTTCAGCTGAGCCAACCATGGCAGAaatgcataagggagatcccatggttcctctg-tttaaatcccctgctaatcccaccagtctcagaaaagcagccaagtcctcacagcagcctgcaacccccgcctgactcggcctcctcttggctctgattctctgtacccttctatcc----ctgtctcTTCTTCCATCT--GAGAGGAGATCCGGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCCCACATATAGTCACCGGAATGAATCGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAAGCAGGCTGGGCA---TGGTGGCTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464068 513 - 202140232 ATGGGGCAGACTT--GAGGGGACAAACTTGAGAAATGCCACCAATGAGAAGCCCAGGCAGAGCAGGTCTTGGGGCCGCCAAGCCGTGTGGGAGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGGTAAACCCTCAACCAAGGGCCTCTGGGTGTCCAAGGCCAAGTCTTGTTCAAGAGGTGCATTCAGCTGAGCCAACCATGGCAGAAATGcataagggagatcccacggttcctctg-ttcaaatcccctgctaatcccacccaactcagagaaggagccaagtcctcacagcagcctgcaacccccgcctgactcggcctcctcctggctctgattctctgcacccttctatccctctctgtctcttctcccatca--GAGAGGAGATCCAGCACGTTTATCCTGGTGGATTCAAACCCATCTTTGCCACACATATAGTCACCGGAATGAATAGGTATAATCTAGAAAGAGTCCTTTTGAAAAAGAAAAAGGCACgccgggca---tggtggctca i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174361637 515 - 174439528 aTGGGGCAGACTTGAGAGGGGACAAACTTGAGAAATGCCACCAAGGGGAAGCCCAGGCAGAGCAGGTCTTGGGGCCGCCCAGTCGTGTGGGCGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGGTAAACCCTCACCCAAGGGCCTCTGGGTGTCCAAGGCCAAGTCTTGTTCCAGAGGTGTGTTCAGCTGAGCCAACCATGGCAGAAATGCACAGGGGAAATCCCATGGTTCCTCTG-TTTAAATCCCCTGCGAATCCCACCCGACTCAGAGAAGCAGCCAAGTCCTCACAGCAGCCTGCAACCcccgcctgactcagcctcctctTGGCTCtgattctctctcccctcctatccctttctgtctcttctgCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCATGCTTGCCACACAGATAGTCACCGGAATGAATAGGTATAATCTATAAAGAGtccttttgaaaaagaaaaaggcaggctggaca---tggtggctca i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1435647 515 + 91010382 ATGGGGCAGACTTGAGAGGGGACAAACGTGAGAAATGCCACCAAGGGGAAGCCCAGGCAGAGCAGGTCTTGGGGCCGCCCAGTCGTGTGGGCGCCAAACGTGGATGTGTCAGTGGCCAGGTCAGGAGGTAAACCCTCACCCAAGGGCCTCTGGGTGTCCAAGGCCAAGTCTTGTTCAAGAGGTGTGTTCAGCTGAGCCAACAATGGCAGAAATGCACAGGGGAAATCCCACGGTtcctctg-tttaaatcccctgctaatcccacccgactcagagaagcagccaagtcctcacagcagcctgcaacacccacctgactcagcctcctcttggctctgattctccctcccctcctatccctttctgtctcTTCTGCCACCA--GAGAGGAGATCCTCCATGTTCATCCTGGTGGATTCAAACCCATGTTTGCCACACAGATAGTCACCGGAATGAATAGGTAtaatctataaagagtccttttgaaaaagaaaaaggcaggctggaca---tggtggctca i chlSab2.chr4 C 0 I 1704 s calJac3.chr5 117213273 521 - 159171411 ATAGGCCAGACTTGGGAAGGGACAAACGCCAGAAATGCTGCCAACGAGAGGCCCAGGCAGAGCCGGTCTTGGGGCTGCCCAGCCATGTGTGCGCCAAACGTGGATGTGTCAGTGGCCATGCCAGGAGTTAAGCCCTCCGCCACGGGCCTCTGGATGGACAAGGCCAAGTCTTGTTGAAGAGGTGAGTTCAGCTGAGCCAACCATAGCAGAaatacacgagggagaccccatggctgctctgattaaaatcccctgctaatcccacctggctcagaggaggagccaagtcctcacggctgcctgcgacccccgcctgactcggcctcctctcgcctctgattctccatgcccatctacccctctctgtctcttctcccaccacgcAGAGGAGATCCTGAAGGTTCATTCTAGTGGATTCAAACCCATCTTTGCCACACAGATAGTCACTAAAATGAATGGGCATCatctataaagagtcctcttgaaaaagaaaaaggcaggccaggcacggtggtggctca i calJac3.chr5 n 47777 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=3435.000000 s hg38.chr3_KI270937v1_alt 140590 6 + 165607 TGCCTA s panTro4.chr3 201675637 6 + 202329955 TGCCTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464581 6 - 202140232 tgccta i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174362152 6 - 174439528 tgcttg i papAnu2.chr6 C 0 C 0 s calJac3.chr5 117213794 6 - 159171411 tatctg i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1436162 1704 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=2905.000000 s hg38.chr3_KI270937v1_alt 140596 6 + 165607 TAACCC s panTro4.chr3 201675643 6 + 202329955 TAACCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464587 6 - 202140232 taatcc i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174362158 6 - 174439528 taatcc i papAnu2.chr6 C 0 I 1017 e calJac3.chr5 117213800 0 - 159171411 C e chlSab2.chr4 1436162 1704 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=273.000000 s hg38.chr3_KI270937v1_alt 140602 1 + 165607 t s panTro4.chr3 201675649 1 + 202329955 t i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2464593 1 - 202140232 t i ponAbe2.chr3 C 0 I 1157 e calJac3.chr5 117213800 0 - 159171411 C e chlSab2.chr4 1436162 1704 + 91010382 I e papAnu2.chr6 174362164 1017 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=90813.000000 s hg38.chr3_KI270937v1_alt 140603 1005 + 165607 gcagggaccagccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcccggggggccactaccaccaatgcgcggagaacggtagtgccccgaatgtctggctgcgctgttatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctgcaatgataggtaaggtcacgtgggtcacgtgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttatgccattatttccgcatatcagggactattagtatttttactaatttactactgctatctagaaggcagagccaggtgtacaggatgaaacatgaaggcggactaggagcgtgaccactgaagcacagcatcacagggagacggttaggcctccggataactgcaggcgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccccggggaaagggagacccccccccctccccgccctttcccggtctgctaagtatcgggtgttgttccttgacaccttttgct--------------atccgcctggtaacaggcatcttcccagacgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttttcctaggctacgattatagagcaaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatataatcatatctaagatctatatctggtataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccaca s panTro4.chr3 201675650 1013 + 202329955 gcagggaccagccccacagggtcggtgggtctctccctgtgtgcggcgacgagagagtgtagaaataaagacacaagacaaagagataagagaaagggcagctgggcccgggggaccactaccaccaatgcgcggagaccggtagtgccccgaatgtctcgctgcgctgttatttattggatacaaggcagaaggggcagggtaaagaatgtgagtcacctccaatgataggtaaggtcacgtgggtcacatgtccactggacagggggcccttccctgcctggcagccgaggcagagagggagaggagacagagagaaagacagcttatgccattatttccgcatatcagggactattagtatttttactaatttactactgctatctagaaggcagagccaggtgtacaggatgaaacatgaaggcggactaggagtgtgaccactgaagcacagcatcacagggagacggttaggcctccagataactgcaggtgagcctgactgatgtcaggccctccacaagaggtggaggagcagagtcttctctaaactcccctggggaaagaaagacaccc------ccccaccctttcccagtctgctaagtattgggtgttgttccttgacaccttttgctaccgctggaccacgatctgcctggtaacgggcgtcttcccagacgctggcatcaccgctagaccaaggagccctctggtggcccggtccgggcataacagaaggctcgcactcttgtcttctggtcacacctcactatgtcccctcagctcctatctctgtatggcctggtttctcctaggctatgattatagagcgaggattatcataatattggaataaaaagtaattgctacaaactaatgattaatgatattcatatataatcatatctaagatctatatctggcataactattcttgttttatattttattatactggaacagctcgtgtcctctgtctcttgcctcggtgcctgggtggcttgccacccgca i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 2464594 1157 - 202140232 I e calJac3.chr5 117213800 0 - 159171411 C e chlSab2.chr4 1436162 1704 + 91010382 I e papAnu2.chr6 174362164 1017 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=152117.000000 s hg38.chr3_KI270937v1_alt 141608 757 + 165607 taatcccagcactttgggaggctgaggtgggagaatcacctgaggtcaggagtttcagaccagcctggacaacatggtgaaaccccatctgtagtaaacatataaaaattagttgggcgtggtggtgcgtgcctgtaatcccagccacttgggaggctgaggcaggagaatcatttgaacccagaagatggaggttgcagtgagctgagatcgcgccactgcactccagcctgggtggcagagtgatat--tgtctcaaaaaCATAGTAATAGGAATAATAAAGGAAAAGTGCaaaaattcaaacaacttaacagaaactgggcaaaagagctgaaccggccctccacagaagaggaaatgtggaggaatggctaatgaaaacatgaagaggggctcagcctaacagggggagatatcacgtgacaaccaccagacgggcaaaaat--------cccacaacccaatccatgccagcgttggggagaatggagagaagcaggaacac-caggcactgctaacgcttgtgaagta------------tatttctgctatgcttgtatatgaaagtgtgtgtgttgtgggttatgaggaaaattacattt-ttacctgggatgaaattttaaaatttgaaagctactgaccagaagaaacttgcgcttgtgtacaaaagaaatgcccaagaacgttcccaacaaaacacagtcctaagggccccaacctggccaaacactcatccacgggaagatgaagacatttcccatgctcccctcagac s panTro4.chr3 201676663 762 + 202329955 taatcccagcattttgggaggctgaggggggagaatcacctgaggtcaggagtttcagaccagcctggaaaacatggtgaaaccccatctgtagtaaacatataaaaattagctgggcgtggtggtgtgtgcctataatcccagccacttgggaggctgaggcaggagaatcatttgaacccagaagatggaggttgcagtgagctgagattgcgccactgcactccagcctgggtgacagagtgatattctctctcaaaaaCATAGTTAtaggaataataaaggaaaagtgcaaaaattcaaac-----aacagaaactgggcaaaagagctgaaccggccctccacagaagaagaaatgtggaggaatggctaatgaaaacatgaagaggggctcagcctaacagggggagatatcacgtgacacccaccagacgggcaaaaatcccacaaccccacaacccaatccatgccagcgttggggagaatggagagaagcaggaacac-caggcactgctaatgcttgtgaagta------------tatttctgctatgctggtatatgaaagagtgtgtgttgtgggttatgaggaaaattacattt-ttacctgggatgaaattttaaaacttgaaagctactgaccagaagaaacttgcgcttgtgtacaaaagaaatgcccaagaacgttcccaacaaaacacagtcctaagggccccaacctggccaaacactcatccacgggaagatgaagacatttcccatgctcccctcagac i panTro4.chr3 C 0 C 0 s calJac3.chr5 117213800 736 - 159171411 taatccaagcactttgggaagccaaggcaggcaggtcacctgaggtcaagg---------cagcctggtcaacatggtgaaatcccgtctctactaaacatacaaaaaatagctggacatggtggcacatgcctttaatcccagcaactctggaagctaaggcaggagaatcgcttgaacccggaagatggaggtggcagtgagccaagatcgtaccactgtactccagcctgggtgacagagggcaactccatctcaa----------ataataataataag--------gcaaaaattcagacaactaaacagaatctgggcaaaagagttgaaccagcccttcacagaagaggaaatgtgaagaaaagaccaataaaaacatgaagagggcctcagcctaacaggatgaagtatcacgtgacacccaccagactggcaaaaat--------cccacagcccaataaatgcaagtgttggggagagtggagagcaacaagaacactcagccactaataaaaattttttatcactgataacaaattttttttgttatacttgcatatgaaatggtgtgtgtt----gttatgaggaaaatcacatttcttacctgggatgaaattttaaaaagtgaaagctactcaccaaaagaaactggcacttgtgtacaaaa-aaatgccctagaatatt-ctagc--aacacagtcctaaggaccccaacctggacaaaca-tcatcaacaggaaaatgaagacactt-ccatgtccccctcatac i calJac3.chr5 C 0 C 0 e ponAbe2.chr3 2464594 1157 - 202140232 I e chlSab2.chr4 1436162 1704 + 91010382 I e papAnu2.chr6 174362164 1017 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=5280.000000 s hg38.chr3_KI270937v1_alt 142365 17 + 165607 gacgggagaccatgcag s panTro4.chr3 201677425 17 + 202329955 gacgggagaccatgcag i panTro4.chr3 C 0 C 0 s papAnu2.chr6 174363181 16 - 174439528 GATGGGAGATCACACA- i papAnu2.chr6 I 1017 C 0 s calJac3.chr5 117214536 17 - 159171411 catgggagattacgcag i calJac3.chr5 C 0 C 0 e ponAbe2.chr3 2464594 1157 - 202140232 I e chlSab2.chr4 1436162 1704 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=116445.000000 s hg38.chr3_KI270937v1_alt 142382 147 + 165607 caatgaaaatgagccatgtcagtgtgggtgggtctcagggagagaatggaggacaaaaatagacacagagcaggtgctcagagcca-tgcagtgcaggagcagccacgcaggagaattccctcacgtcaaagttcaaaactacagccg s panTro4.chr3 201677442 147 + 202329955 caatgaaaatgagccatgtcagtgtgggtgggtctcagggagagaatggaggacaaaaatagACACAGAGCAGATGCTCAGAGCCA-TGCAGTGCAGGAGCAGCCACGCAGGAGAATTTCCTCACGTCAaagttcaaaactacagccg i panTro4.chr3 C 0 C 0 s papAnu2.chr6 174363197 145 - 174439528 --ATGAAAATGAACCACATCAGTGTGGGTGGGTCTCAGGGGGAGaatggaagacaaaaacagacaTTGAGCAGATGCTCAGAGCCA-TGCAGCGTAGGAGCAGCCACACAGGAGAATTTCCTCACATCAAAGTTCAAAACTACAGCcg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1437866 147 + 91010382 CAATGAAAATGAACCACATCAGTGTGGGTAGGTCTCAGGGGGAGAATGGAAGACAAAAACAGACATTGAGCAGATGCTTAGAGCCA-TGCAGTGCAGGAGCAGCCACACAGGAGAATTTCCTCACATCAAAGTTCAAAactacagccg i chlSab2.chr4 I 1704 C 0 s calJac3.chr5 117214553 148 - 159171411 cagtgaaaatgaataacgtcaatgtggatgggtctcgggaagagaatggaggacaagaatagacatggagcagatgctcagacccagtgcagcctaggagcagccacacaggagaatttctccacatcggagttcaaaactatggccg i calJac3.chr5 C 0 C 0 e ponAbe2.chr3 2464594 1157 - 202140232 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=74251.000000 s hg38.chr3_KI270937v1_alt 142529 81 + 165607 aggcaacagagcaag-accctgcctcaaaaagaaaacagaaagttcaaaaactaaatggcatatctttt-agggatgtacaca s panTro4.chr3 201677589 81 + 202329955 aggcaacagagcaag-accctgcctcaaaaagaaaacagaaaGTTCAaaaactaaatggcttatttttt-agggatgtacaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2465751 82 - 202140232 AGGCAACAGAGGAAGAACCCTGTCTCAAAAAcaaaa-acacagttccaaaatgaaatggcatattttttcagggatgtaaacg i ponAbe2.chr3 I 1157 C 0 s papAnu2.chr6 174363342 78 - 174439528 aggcaacagagcaag-accctgcctcaaaaagaaaacagaaagttcaAAAACTAAATGGCATA--TTTT--GGGATGTACACA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1438013 76 + 91010382 aggcaacagagcaag-accctgcctcaaaaagaaaaT----AGTTCAaaaactaaatggcatatttttt--gggatgtacaca i chlSab2.chr4 C 0 I 5089 s calJac3.chr5 117214701 80 - 159171411 cagcagcagagcaag-accctgtctcaaaaagacac-agaaacttcaaaaactaaatggcatattgttt-agggataaacatg i calJac3.chr5 C 0 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=1097.000000 s hg38.chr3_KI270937v1_alt 142610 2 + 165607 ca s panTro4.chr3 201677670 2 + 202329955 ca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2465833 2 - 202140232 ta i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174363420 2 - 174439528 TA i papAnu2.chr6 C 0 I 2 s calJac3.chr5 117214781 2 - 159171411 ta i calJac3.chr5 C 0 I 2 e chlSab2.chr4 1438089 5089 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=667242.000000 s hg38.chr3_KI270937v1_alt 142612 611 + 165607 cggtgaaagaaacatactatgaaggaaagtgtgcaaataataaagactaaagcaggaagtgattccctccgtaggagaagggaagggactgggactcaggcagggcctccaggg-agcatccaaagctatgtctcttcagattctactccctaaacttggtggaggtcctctgtgtccaatgtgtcaatattctttataccttacccatactgtaaaaacgctttatttctattcaatatttagaagacagttataaACAAGATGCATTCAATAGCATGGTGGCAGATGAACATCAGGAAGGAACATCCATGAGC---------TTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACA-----CGGTCACAGATCAGAGGCCACAC-CATCCTAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGGGTGAACGGACACAATTGCCAGAACTCACAGAATAGAAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT s panTro4.chr3 201677672 611 + 202329955 cggtgaaagaaacgtactatgaaggaaagtgtgcaaataataaagacgaaagcaggaagtgattccctccgtaggagaagggaagggactgggactcaggcagggcctccaggg-agcatccaaagttatgtctcttcagattctactccctaaacttggtgcaggtcctctgtgtccaatgtgtcaatattctttataccttacccatactgtacaaatgctttatttctatTCAATATGTAGAAGGCAGTTATAAACAAGATGCATTCAATAGCAAGGTGGCAGATGAACATCAGGAAGGAACATTCATGAGC---------TTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACA-----CGGTCACAGATCAGAGGCCACAC-CATCCTAGCAGTGGAGCAGGACCAGCTGGGACAGGGTCCTTCTGTGACACCTGCTGCATCACCAGGCTGAGTGAATGGACTCAATTGCCAGAACTCACAGAATAGAAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCGTTAATAGTAACTCTCAGATTAATCTCTGTCATCCATAGCTTCTCCAAGAAAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2465835 611 - 202140232 cggtgaaagaaacatactatcagggaaagtgtaggaataataaagactaaagcaggaagcgattccctccgtaggagaagggaagggactgggactcaggcagggcctccaggg-agcatccaaagttatgtctcttgagattctgctccctaaacctggtggaggtccactgtgtccaatgtgtcaatattctttataccttacccatactgtacaaatgctttatttctattcaatatttGGAAGACAGTTATAAACAAGATGCATTAAATAGCAAGGTGGCAGATGAACATCAGGAAGGAACATCCATGAGC---------TTCCATCCACGGAACCTCACCATGGATACGCTTGTGATCAAGGGCCTGGTCTCCCCTCAAGACA-----CGGTCACAGATCAGAGGCCACAC-CATCATAGCAGTGGAGCAGGACCAGCTGGGACAGGGTTCTTCTGTGACACCTGCTGCATCACCAGGCTGTGGGAATGGACTCAATTGCCAGAACTCACAGAATAGCAGTATCAGCACCAAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCACTTCTCCAAGAAAT i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174363424 601 - 174439528 CGGTGAAAGAAACGTACTGTGAAGAAAAGTACGGGAACAATAAAGATTAAAGCAGGAAGTGATTCCCTCTgtaggagaagggaagggactgGGACTCAGGCAGGGCCTCCAGGG-AACATCTGAAGTTATGTCTCTTCAGATTCTATTCCCTAAACTTGGTGGAGGTCCTCTGTGTCCAATGTGTtgatattctttatattttacccATATTGTACCAATGCTTTATTTCTATTCAATATTTAGAAGACAATTATAAACAAGATGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAGG---------TTCCATCCACAGAACCTCACCATGGATACGCTTGTGATAAAAGGCCTGGTCTCCCCTCACGA-----------CACAGAGCAGAGGCCGCAC-CATCAT---AGTGGAGCAGGAGCAGCTGGGACATGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACTCAGCGGCCAGAACTCACAGAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTTTGTCATCCATCGCTTCTCcaagaaat i papAnu2.chr6 I 2 C 0 s chlSab2.chr4 1443178 601 + 91010382 cggtgaaagaaacatactgtgaagaaaagtacgggaacaataaagattaaagcaggaagtgattccctctgtagaagaagggaagggactgggactcaggcagggcctccaggg-aatatctgaagttatgtctcttcagattctattccctaaacttggtggaggtcctctgtgtccaatgtgtcgatattctttatattttacccatattgtaccaatgctttatttctattcaatatttAGAAGACAGTTATAAACAAGATGCATTAAATAGCAAGATGGCCGATGAACATCAGGAAGGAACATCCATGAGG---------TTCCATCCACAGAACCTCACCATGGATACGCTTGTGATCAAAGGCCTGGTCTCCCCTCACGA-----------CACAGAGCAGAGGCCGCAC-CATCAT---ACTGGAGCAGGAGCAGCTGGGACAGGGCCCTTCTGTGA-ACCTGCTGCATCGCCAGGCTGTGCAAACGGACCCAGCGGCCAGAACTCACACAGTATCAGTATCAGCACCGAAACCTCACAGGAAAAATGGTAAGTTCTAAGTTTCTCCATTAATAGTAACTCTCAGATTAATCTCTGTCATCCATCGCTTCTCCAAGAAAT i chlSab2.chr4 I 5089 I 1308 s calJac3.chr5 117214785 599 - 159171411 tggtgaaagaaataaactataaagaaaagtacaggaataagaaaggctaaa-cagaaagtgactccctctgt---agaagggaagggactgggactcaggaggggcctccagggaagcatccaaagttctgtctcttt-gtttttattccctaaacttggtagaggtcctatgct-------------tattctttatccctgacccatatggtacaaatgcttt-ttTCTACCCAGTCTTTAGAAGACAGTTATAAACAAGATGCATT-AATTGCAAGATGGCGGATGAGCAT-AGGAAGGCACAT-CAGGAGCGTCCCTGTGCTCCATCCATGGAACCTCACCATGGACACCCTTGTGCTCATAGGCCTGGTCTCCTCTCAAGACAGTCAGTGGTCGGGGATCAGAGGCAGCACTCATCACAGCAGAGAGGCAGGACCAGCTGGGAGA-GGCCCTTCTGTAACACCTACTGCATCACCAGGCTGTGTGAACGGACTCAGCTGCCAGAACGCACAGAGTATCAT--TCCACACCGAAACCTCACGGG--AAATGGTAAGTTCTCAGTTTCTCCATCAATA-CAACTCTCAGATTAATCTCTGTCCTCCATCACTTCTCCATGAAAC i calJac3.chr5 I 2 C 0 e nomLeu3.chr11 2900956 4012 - 123690457 I a score=6972.000000 s hg38.chr3_KI270937v1_alt 143223 9 + 165607 GACTTTTTA s panTro4.chr3 201678283 9 + 202329955 AACTTTTTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2466446 9 - 202140232 AACTTTTTA i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174364025 9 - 174439528 aacttttta i papAnu2.chr6 C 0 I 438 s calJac3.chr5 117215384 9 - 159171411 AACGTTTTA i calJac3.chr5 C 0 I 843 e chlSab2.chr4 1443779 1308 + 91010382 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=502106.000000 s hg38.chr3_KI270937v1_alt 143232 1980 + 165607 GGGTGATGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTT-GGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCC-GGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGACGTCGGGGGGTGGGGGGAGGCGTTCCGGTCCCCAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGACAGGCTCCAGGAGGCGCTGGAAGATTTTGAGAAGA-GGCAAAAAAGAAAGTCTGTCCTGTCCTGGATCAGTTCCTTTTGTCATGTAGCCAAGACTGGAGAAACAGATTCCGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTGTGATGAAACAAAGGGAAGAATACTGAAAAACTGTCACTGGATTTAACCGTATCCCTTTTACTATTCAGCGATTATGTGAATTGTTAACAGATCCGAGGAGAAACTATACAGGAACAGACAAATTTCTCAGAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTGATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACGTAATCGACCAAAGGTTTCTCTGTCAGCCCCCATGACAACAAATGGGTGGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAATGAAGAGAAAACT--CAGTGACTCTTCGACATCTGAATCAGAAGTTTCCTCAGTGAGCCCTTTGAGAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGACAAAAAAGGCGAAGTCGGAGAAATAGCCAGTCAAGCGACTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCATGATAAAGACAAAAAAAGCCATGGTACCCGGCAGCGCGTTCagaagaagat------gaagatgaagaggaagaagaagGGATTGAGA--GACCATCTGTAAAAGGGAGGAGTAAGGAGATCCTCAAATTCTTGCATTCATTGTTTTTGTGAAAGAATTGTACATCATGGAACTCCTTGTAATGTCGACGCTGGGCTTTTCTCCCACCTGTATGCAGTTGCTGCTGAATTTCAGGGGATGTGATTTGAACTACAGAACATCAGAATTCACGAAACTTAACTGTGGAGGTATTTTGAATATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGGTCCCAGAAAGAAAAAACCAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCATGGATAATGATGACGAAGCCACAGAAGTCACCGATGAACCACTGGAACAAGACTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACTGTATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTATAAGAAAAGCAGGTTGTAAAATAAAGTACTTTATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACCGCTGATTTCTTtttctttctttctttctttctttctttctttcttt s panTro4.chr3 201678292 1982 + 202329955 GGGTGACGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTT-GGGGAGGTGCTCACTCTGTCGGTCTCACTCTCTCACACGCTTCCCCTGGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGTGCTGGAGGGTGTGCGAGGGAGTGGGAGGATGTCAGGGGGTGGGGGGAGGCGTTCCGGTCCCCAAGAGACCCGCGGAGGGAGGCGGAGGCTGTGAGGGACTCCGGGAAGCCATGGACGTCGAGAGGCTCCAGGAGGCGCTGGAAGATTTTGAGAAGAGGGGGAAAAAGAAAGTCTGTCCTGTCCTGGATCAGTTTC-TTTGTCATGTAGCCAAGACCGGAGAAACAGATTCCGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGATGATTTCAGAACTTCAGCTCCTGCGCCAAGAGGTCCTCCCAACCCTAATGTCGAATATATTCCCTTTGATGAAACAAAGGAAAGAATACTG-AAAACTGTCACTGGATTTAACCGTATCCCTTTTACTATTCAGCGACTATGTGAATTGTTAACAGATCCAAGGAGAAACTATACAGGAACAGACAAATTTCTCACAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTTTAAATCGAATGAATGGTGTTATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTTCTTTGTCAGCCCCCATGACAACAAAAGGGTCGCCTGAGAGCACAGACAGCAAAGAGGCAAATTTGCAGCAAAATGAAGAGAAAACTCACAGTGACTCTTCGACATCTGAATCAGAAGTTTCCTCAGTGAACCCTTTGAGAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGAC-AAAAAGGCAAAGTTGGAGAAACAGCCAGTCAAGCGACTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCACCTTCATCTCAGGATAAAGACAAAGAAAGCCGTGGCACCCGGCAGCGCATTCagaagaggat---gaagaagatgaagaggaagaagaagGGATTGAGA--GACCATCTGTAAAAGGGAGGAGTAAGGAGATCCTCAAATTCTTGCATTCATTGTTTTCGTGAAAGAACTGTACATCATGGAACTCCTTGTAATGCCGACGCTGGGCTTTTCTCCCACCTGTATGCAGTTGCTGCTGAATTTCAGGGGATGTGATTTGAACTACAGAACATCAGAATTCATGAAACTTAACTGTGGAGGTATTTTGAAAATAAAATTTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAACCAAGAAAAAGAATCTGATGATGCCTCAACTGTGAATGAAGAGACTTCTGAGGAAAATAATGAAATGGAGGAATCTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAGTGAAAACGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGTAGGATCCAATTCCAGTAAAACTGGAGAGATTCTTTCAGAATCATCCGTGGAAAATGATGACAAAGCCACAGAAGTCACCGGTGAACCAATGGAACAAGATTATTTAGAAACATTTACATGCAGTATTTTACACACAGTTCTGGTTTTAACACCATATAAAACTTTTATGTAAAAAAGTGCACCTTTAGTTTTACAAGAAAAGCAGGTTGTAAAATAAAGTACTTTATGGATAATTCCTGAAAGAGTTGTCCATGTAAGAACTGTGAATATCAGCTCCTCTGGATCCTGCTTACCTTACCGCTGAtttctctttctttc--tctttctttctttctttctttcttt i panTro4.chr3 C 0 I 582 s ponAbe2.chr3 2466455 1950 - 202140232 GGGTGACGTGCCAGGCGCCATGTTGGAGGGCTGGTGGTAGCGGCTTGGGGGAGGTGCTCGCTCTGTCGGTCTCCCTCTCTCACACGTTTCCCT-GGCTCCCTTCGTTCCCCCCCACCCCACTTGGCCTGCGAGCTGGAGTGTGTGCGAGGGAGTGGGAGGACGTGGGGGGGTGGGGGGAAGAGTTCCGGTCCCCAAGAGACCCGCAGAGGGAGGCGGAGGCTGTGAGGGACTCCAGGAAGCCATAGACGTTGACAGGCTCCAGGAGGCACTGGAAGACTTTGAGAAGAGGGGGAAAAAGAAAGTTTGTCCTGTCCTGGATCGGTTTC-TTTGTCATGTAGCCAAGACTGGAGAAACAGATTCAGTGGTCCCAATTTAAAGGCTATTTTATTTTCAAACTGGAGAAAGTGATGGACGATTTCAGAACTTCAGCTCCTGAGCCAAGAGGTCCTCCCAACCCTAATGTGGAATATATTCCCTTTGATGAAACAAAGGAAAGAATACTG-AAAATTGTCACTGGATTTAACGGTATCCCTTTTACTATTCAGCGACTATGGGAATTGTTAAGAGATCCAAGGAGAAACTATACAGGAACAGACAAATTTCTCAGAGGAGTAGAAAAGAACGTGATGGTTGTTAGCTGTGTTTATCCTTCTTCAGAGAAAAACAATTCCAATAGTATAAATCGAATGAATGGTGTTATGTTTCCTGGAAATGCACCAAGCTATACTGAGAGGTCTAATATAAATGGGCCTGGGACACCCAGGCCACTTAATCGACCAAAGGTTTCTTTGTCAGCCCCCATGACAACAAATGGGTTGCCTGAGAGCACAGACAGCAAAGAGGCACATATGCAGCAAAATGAAGAGAAAAATCACAGTGACTCTTTGACATCTGAATCAGAAGTCTCCTTAGTGAGCCCTTTGAAAAATAAACATCCAGATGAAGATGCTGTGGAAGCTGAGGGGCATGAGGTAAAAAGACTCAGGTTTGACAAAAAAGACGAAGTCAGAGAAACAGCCAGTCAAACGATTTGCAGCGAAATTTCTTCAGTTATGGTAGAAGAAACAGAAGCATCATCTTCATCTCAGGATAAAGATAAAGAAAGCCGTTGTATCCAGCAGCGTGTACagaagaggatgaagaagaggacgaagaggaagaagaagGTATTGAGAGGGACCATCCGTAAAAGGGAGGAGTAAGGAGATCCTCAAATTCTTGCATTCATTGTTTTCATGAAAGAATTGTACATCACGGAACTCCTTGTAATGCCGACGCTGGGCTTCTCTCCCACCTGTATGTAGCTGCCGCTGAATTTCAGGGGATGTGATTTGAACTATAGAACATCCGAATTCATCAAACTTAACTGTGGAGGAATTTTCAAAATAAAAATTAAGTACAACAACATTTGCTTATTTTTAGAGTCTTTTATGACATCAAGAGAAATGATCCCAGAAAGAAAAAATCAAGAAAAAGAATCTGATGATGCCTCAACTATGAATGAAGAGACTTCTGAGGAAAATAATCAGATGGAGGAATGTGATGTGTCTCAAGCTGAGAAAGATTTACTACATTCTGAAGGTAATGAAAATGAAGGCCCTGAAAGTAGTGGTTCTTCTGACTGCCGTGAAACAGAAGAATTAGCAGGATCCAATTACAGTAAAACTGGAGAGATTCTTTCAGAATCATCCATAGAAAATGATGATGAAGCCGCAGAAGTCACCGATGAACCAATGGAACAAGGTTATGTAGAAACATTTAGATGCAGTATTTTACATACAGTTCTGGTTTTAATACCGTATAAAACTTTTATGTACAAAAGTAGACCTTCCGTTTTACAAGACAAGCAGGTTGTAAAATAAAGTACTTTATGAATAATTCCTGAAAGAGTTGTACATGTAAGAACTGTGAATATCAGCTCCTCTGGGTCCTGCTTACCTTACCACTGAT---------------------------------------- i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 117215393 843 - 159171411 I e chlSab2.chr4 1443779 1308 + 91010382 I e papAnu2.chr6 174364034 438 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=-899.000000 s hg38.chr3_KI270937v1_alt 145212 34 + 165607 ctttctttctttctttctttctttctttctttct s ponAbe2.chr3 2468405 1 - 202140232 ---------------------------------T i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 117215393 843 - 159171411 I e chlSab2.chr4 1443779 1308 + 91010382 I e papAnu2.chr6 174364034 438 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I e panTro4.chr3 201680274 582 + 202329955 I a score=118224.000000 s hg38.chr3_KI270937v1_alt 145246 512 + 165607 tttctttctttctttctttctttGGTCTGGGCAAATCAGTGGTTTGTGTATAGA---------TTTTTTTTTTTAATTTAGGATTAAAGTTTTTAAACTGGAAAGTAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTAGTTTATACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAGCTCCAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATAGAGTTTCATGCTGGTTTCCAGATTTTATTGTTCGGATACATACAATAGAACCTTAAGTTTtatatatatatatatatatatatatatatatatatatatatatatatatatatTCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATAAATACAGTGGATACTTTTTCTATTGGTAATGACTGAGTTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTCTGTGAAACCCTGGAAATA s panTro4.chr3 201680856 480 + 202329955 tttctttctttctttctttctttGGTCTGGGCAAATCAGTGGTTTGTATATAGA----------TTTTTTTTTAAATTTAGGACTGAAGTTTTTAAACTGGAAAGAAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTACTTTATACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAGCTCTAGCAGTTTTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATAGAGTTTCATGCTGGTTTCCAGATTTTACTGTTCGGATACATACAATAGAACCTTAAGttttatatatatatatatatat-------------------------------tattCTAAGGGGGAAAATGTTATATTTTTCTGTTTGTATAAGAGATGAATACAGTGGATACTTTTTCTATTGGTAATGACTGAGTTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTGAGTAACTGAAATAAAATCTGGCCTTTGTGAAACCCTGGAAATA i panTro4.chr3 I 582 C 0 s ponAbe2.chr3 2468406 484 - 202140232 tttctttctttctttctttttttGGTCTGGGCAAATCAGTGGTTTGTGTATAGttttttttttttttttttttttttttAGGATTGAAGTTTTTAAACTGGAAAGTAATTATAATTTTGAACAGTTTTTTGAGATTATCACATTTACTTTATACATATGCAAGAAGCTTTTTGTCTTGTGTCTTTCTGATAACTCTAGCAGTATTCATATTTTGGTCATAGTTTCAACATTTTAACATGTGAATAATGGGGTTTCATGCTGGTTTCCAGATTTTATTGTTTGGCTACATATGATAGAACTTTAAGT------TACATATATATACAT-------------------------------TATTCTAAGGGGGGAAATGTTATATTTTCCTGTTTTAATAAGAGATTAATACAGTGGATACTTTTTCTATTGGTAATGATTGAGTTCACCTCTTTCAGAAGACATTTTCTTTCTCTTCTAAGTAACTGAAATAAAATCTGGCCTTTGTGAAACCCTGGAAATA i ponAbe2.chr3 C 0 C 0 e calJac3.chr5 117215393 843 - 159171411 I e chlSab2.chr4 1443779 1308 + 91010382 I e papAnu2.chr6 174364034 438 - 174439528 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=17562.000000 s hg38.chr3_KI270937v1_alt 145758 24 + 165607 CCACGACCCTCAACTAGAAACACC s panTro4.chr3 201681336 24 + 202329955 CCACGACCCTCAACTAGAAACACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2468890 24 - 202140232 CCACGACTCTCAACTAGAAACACC i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174364472 24 - 174439528 CCACGAACCTCAAACTACAACACC i papAnu2.chr6 I 438 C 0 s chlSab2.chr4 1445087 24 + 91010382 CCACAACCCTCAACTAGAAACACC i chlSab2.chr4 I 1308 C 0 e calJac3.chr5 117215393 843 - 159171411 I e nomLeu3.chr11 2900956 4012 - 123690457 I a score=26587.000000 s hg38.chr3_KI270937v1_alt 145782 37 + 165607 AATACCAGCTCCTCCGCGAGTTT-CCAGCTCCACAACC s panTro4.chr3 201681360 37 + 202329955 AATACCAGCTCCTCCGTGAGTTT-CCAGCTCCACAACC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2468914 37 - 202140232 AATACCAGCTCCTCCACGAGTTT-CCAGCTCCACAACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2904968 38 - 123690457 aacatcagctccttcacgggtctgtaagaccctcaaac i nomLeu3.chr11 I 4012 C 0 s papAnu2.chr6 174364496 36 - 174439528 AGCCTTCTTTC-TCCTTAGGTCT-CCAGCTCCAAAACC i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1445111 37 + 91010382 AACTCCAGCTCATCCGTGGGTCT-CCAGCTCCACAACC i chlSab2.chr4 C 0 I 33 e calJac3.chr5 117215393 843 - 159171411 I a score=71246.000000 s hg38.chr3_KI270937v1_alt 145819 147 + 165607 TAAGACATCAGAGGCAGCATTGGTTCCTCACGTAGAGTCCAGCTCCGGGACCCTCATATTTGAACCGCAGGGCCATCTCATCCCTGGATCTCcagctgcaccacactcaaattagaa------caacatcagttcctccccaggtctccacct s panTro4.chr3 201681397 147 + 202329955 TAAGACATCAGAGGCAGCATTGGTTCCTCACGTAGAGTCCAGCTCCGGGACCCTCATATTTGAACCGCAGGACCATTTCATCCCTGGACCTCcagctgcaccacactcaaattagaa------caacatcagctcctccccaggtctccacct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2468951 147 - 202140232 TAAGACATCAGAGGCAGCATTGGCTCCTCATGTAGATTCCAGCTCCGGGACCCTCATATTTGAACTGCAGGAACATCTCATCCCTGGATCTCCAGCTGCACCACACTCAAATTAGAA------CAACATCAGCTCCTCCCCAGGTCTCCACCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905006 125 - 123690457 ctgaatatca------------gctcctccc-tggtctgcagctGCGAGACCCTCAAAGCAGAAC------ATCAGCTCCTCCCAAGGTCTGCGGCTGCAATACTCCAAAACGGG---------AACATCAGCTCCTCCCCGGATCTGCGGCT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174364532 153 - 174439528 TAAGACATCAGTGGCAGTACCTACTCTTCCTGGAGGCTCCAGCTCTGACAGCCTCAGACTTGAACCGCAGCACCAGCTCTTCCCCGGATCTCCAGCTCCACCACCCTCAGATTTAAacagcagcagcaccagctcATCCGTGGGTCTCTAGCT i papAnu2.chr6 C 0 C 0 e calJac3.chr5 117215393 843 - 159171411 I e chlSab2.chr4 1445148 33 + 91010382 I a score=190696.000000 s hg38.chr3_KI270937v1_alt 145966 306 + 165607 gcacagccctcgaaaggg---------aatgtcagctcctccccgggtctccagctgtagggccctaaaactaga------acatcagctcccgcctgggtcgccagcagcaccaccctcaaact------ggaacatcagatcc-ccacgggtctccagctgcagggcc-------------------------------------------------ctcaaactggaa------catcagctccccaccagatctccagctgcacggacctca---------aactggaacatcagctccccgccgggtctccagctgcactgcctgcaaactggaa------catgagctccctgcccggtctccagctgcatggccctcaaactggaacatca--------- s panTro4.chr3 201681544 306 + 202329955 gcacagccctcgaacggg---------aacgtcagctcctccccaggtctccagctgcagggccctaaaaataga------acatcagctcccgcctgggtcgccagcAGCACCACCctcaaact------ggaacatcagatcc-ccacgggtctccagctgcagggcc-------------------------------------------------ctcaaactggaa------catcagctccccaccagatctccagctacacggacctca---------aactggaacatcagctccccgccgggtctccagctgcactgcctgcaaactgaaa------catgacctccctgccgggtctccagctgcatggccctcaaactggaacatca--------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469098 306 - 202140232 GCAGAGACGTCGAACGTG---------AATGTCAGCTCCTCCCCGGGTCTCCAGCTGCATGGCCCTAAAACTAGA------ACATCAGCTCCCGCCCGGGTCGCCACCTGCACCACCCTCAAACT------GGAACATCAGATCC-CCACGGGTCTCCAGATGCAGGGCC-------------------------------------------------CTTAAACTGGAA------CAACAGTTCCCTACCAGATTTCCAGCTACACGGCCCTCA---------ATCTGGAATATCAGCTCCACCCCGGGGCTCCAGGTGCACAGCCCTCAAACTGCAA------CTTCAGCTCCCAGCCAGATATccagctgcatgtccctcaaactgcaacatca--------- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905131 307 - 123690457 GCAAGACCCCcaatccgg---------aacatcagctcctccctgggtctgcggctgcaagacactcaaactgga------acttcagctcctccctgggtcCGCAGATGCAAGACCCTCAAACC------GGAATATCAGCTCCTCCACCGGTCAGCGGCTGCATCATC-------------------------------------------------CTCAAACCAGAA------CATGAGCTCCTCCCTGGATCCGTGGCTGCAAGACCCAGA---------AACCAGAACAGAAGCTCCTCCTCGGGTCCATGGCTGCACCACCctcaaaccggaa------catcagctcttacccgggtctgtggctgcacgaccctcaaactggaacatca--------- i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174364685 382 - 174439528 CCACGACACTCAAACTAG------GACAACATCAGCTCATCCCCGGGTCGCCAACTGCATGACAATCCAACTAGAAA---CACaccagctcctccctgggtctccagctccacaaaCCTCACACTACAAAAGCAACACCAGCTCCTCCTCAGGTCTCCAGCTTTACAACCTAAGACAGTGGCAGCTCCAGCTCCACCCAGGGGCTCAAGCTCCGAGCCTCTCAGACTTGAACCTCAGCACTAGCTCTTCCGTGGATCTCCAGCTCGACGACCTTCAGATTTACACAACAGAAGAACCAGCTCCTCCCTGCATCTCCAGCTACACGACCCTC-AACTACAA------CATCAGCTCTTCCCCAGGTCACCAGCTCCAGGGCCCACAAACTAGAACAACA--------- i papAnu2.chr6 C 0 I 1441 s calJac3.chr5 117216236 358 - 159171411 CCATGACCCTCAGAATTGCATGGTGATAGCACCGGCTCCTCCCTGGATCTCCAGCTCAATGACTCTCAGACTTGAAAGGCAGCATCGGCTCCTCACCAAGGCTCCAGCTCCAAGACCCTCACACTAGAACAGCAGCAGCAGCTGCACCTTGGGTCTCCAGCTCCACCACC-------------------------------------------------CTCAAAGAAGAACAGCAGCACCGGctcctccctgggtctccagctccaccaccctcagatctgaataccagtagcaccagctcctgtctgggtctccagttctatgaccttcaaactagaacaacggcaccagttcctcccagagtctcaagctccacgaccctcagacctaaacaaaaacaacactg i calJac3.chr5 I 843 C 0 e chlSab2.chr4 1445148 33 + 91010382 I a score=31644.000000 s hg38.chr3_KI270937v1_alt 146272 40 + 165607 gctccccaccagattgccagctg-----cacggccctcaaactgg s panTro4.chr3 201681850 40 + 202329955 gctccccaccagatcgccagctg-----cacggccctcaaactgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469404 40 - 202140232 gttccaccctgggtctccagctt-----catggccctcaaactgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905438 40 - 123690457 gctcctcccctggaatgcggctg-----cacgaccctcaaactgg i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174366508 40 - 174439528 GCTCCTCTGcaggtctccagctc-----cacgacccacaaactag i papAnu2.chr6 I 1441 I 2707 s calJac3.chr5 117216594 45 - 159171411 gctcctccctgggtctccagcttcaacccaAGACCCTCAAACAAG i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445148 33 + 91010382 I a score=23382.000000 s hg38.chr3_KI270937v1_alt 146312 34 + 165607 ------aatatcagctccac-cccggggctccaggtgcaca s panTro4.chr3 201681890 34 + 202329955 ------aatatcagctccac-cccggggctccaggtgcaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469444 35 - 202140232 ------aacattagccccccgcccaggcctgcagctccacg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905478 34 - 123690457 ------aatatctgctcttc-cccgggtctgcggctgcact i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174369255 34 - 174439528 ------AAAACCGGCTCCAC-CGCAGGACTCCAGCTTCGCA i papAnu2.chr6 I 2707 I 1060 s calJac3.chr5 117216639 40 - 159171411 AACAGCAGCACCAGCTCCTC-CCCAGGGCTCCAGCTCCACC i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445148 33 + 91010382 I a score=54350.000000 s hg38.chr3_KI270937v1_alt 146346 106 + 165607 gccctcaacctgcaaca---------tcagctccccact------gggtctccagatgaatggccctcaacctgcaaca------tca--gctccccaccgggtctccagatgcatggccctcaaactg s panTro4.chr3 201681924 59 + 202329955 --------------------------------------------------------------gccctcaacctgcaaca------tca--gctccccaccgggtctccagatgcacggccctcaaactg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469479 106 - 202140232 gccctcaacctgcaaca---------tcagctccccacc------aggtctccagatgcacggccctcaaactggaaca------tca--gctccctgccaggcctccagatgcacggcctgcaaactg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905512 106 - 123690457 accctcaaactggaaca---------tcggcttctcccc------gggttttcggctgcacgaacctcaaactgaaaca------ccg--gctcctctcagggtctgcggctgcaagatcctcaaacta i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174370349 118 - 174439528 ACCCTCAACTAGGAACA---------CCAACTCCACCTCTTCcatgggtctccagctccacgaccctcaactagaaacaccaactTCA--GCTCCTCCACGGGTCTCCAGCTCCGTGACCCACAAACTA i papAnu2.chr6 I 1060 I 1915 s calJac3.chr5 117216679 117 - 159171411 ATcctcagacttaaacaataacaaccgcagctcctctgt------gggtctccagctccacgactctcaaacaaaaaca------ccaccactcctccctgggtttccagctccatgaccctcgaacta i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445148 33 + 91010382 I a score=21859.000000 s hg38.chr3_KI270937v1_alt 146452 30 + 165607 gaacatca--gctccccaccgggtctccagct s panTro4.chr3 201681983 30 + 202329955 gaacatcg--gctccccaccgggtctccagct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469585 29 - 202140232 gaacatca--gct-ctcatcaggtctccagct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905618 30 - 123690457 caacatca--gctcctctccagttctgcggct i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174372382 30 - 174439528 CAACATGG--GCTCCTCTGCACGTCTCCAGCT i papAnu2.chr6 I 1915 C 0 s calJac3.chr5 117216796 32 - 159171411 gaacaacactgcacctccctgggtctccagct i calJac3.chr5 C 0 T 1040 e chlSab2.chr4 1445148 33 + 91010382 I a score=171380.000000 s hg38.chr3_KI270937v1_alt 146482 426 + 165607 gcatggccttaaac------------------------------------------------------tggaacat--------------------cagctccgagaccctcaaacaggaaca------tcagctccccacagggtctccagctGCACAGCCCTCAAATTGCAACATCA-CTTCCCCCCTGCATGTCCAGCTGCACCG-Cctc------aaactgcaacatcagctccccgctgggtctccagcAGCATGGCCCTCAACCTGGAACATCA------GCTCCCCCCAACCCGGGTCTCCAACTCCACAGCCctcaacctgcaacactggctaccaact------gggtctccagatgcatggccctcaaactggaacatca-gctccacccccggtatccagctgcacagccctcaaactggaacatca----------------------------------------------------------gctccctgccgggtctccaggtgcacggccctcaaactggaaca------tcagctccccaccaggtctccagccgcacggccctcatactggaa s panTro4.chr3 201682013 426 + 202329955 gcattgccttaaac------------------------------------------------------tggcacat--------------------cagctcccaggccctcaaacaggaaca------tcagctccccacagggtctccagctgcacagccctcaaattgcaacatca-gttcccccctgggtctccagctgcaccg-cctc------aaactgcaacatcagttccccgctgggtctccagcagcacggccctcaacctggaacatca------gctccccccaacccgggtctccagctccacagccctcaacctgcaacactggctacccact------gggtctccagctgcacggccctcaaactagaacatca-actccctgccaggtctccaggtgcacagccctcaaactggaacatca----------------------------------------------------------gctccctgccgggtatccagctgcacggccctcaaactggaaca------tcagctccccaccaggtctccagctgcacggccctcatactggaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2469614 395 - 202140232 gcacag-----------------------------------------------------------------------------------------------------ccctcaaactggaata------tcagctccacccccgggctccaggtgcacagccctcaaactgcaacatca-ggtcccaccag-gtatccagctgcatggccctc------aaactgcaacatcagtaccccaccgggtctccagcttcatggccctcaaactgtaacatca------gatcccc---gcccaggtctccagctccaaggccctcaacctgcaacatcagctcccctcc------gggtatccagAGGCACGGCCCTCAAACTGAAACATCG-GCTCCCCACCAGGTCTCCAGATGCATAGCCCTCAAACTGGAACATCA----------------------------------------------------------GCTCCCCACAGGGTCTCCAGCTGCACGGCCCTCAAATTGCAACA------TCAGTTCCCCCCCCGTTGTCCAGCTGCACCA-CCTCAAACTGCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2905648 442 - 123690457 gcacgaccctcaatg-----------------------------------------------------tagaacat-tggcacttctctgggtctgcagctACAAAACCCTCAAACAGGAACA------TCCGCGCCTCCACAGGTCTGCGGCTGCAAGAccctgaaactggaacatca-gctcctccctg-gtccacggctgcaagaccctc------aaactggaacatcagctcctccctgggtttgcggctgcaagaccctcaaactggaacatca------gctcctc----cccgggtccgtggctgcaagaccctcaaaccggaacatcagctcctcccc------gggtccgtggctgcaagaccctcaaaccggaacatca-gcacctccccgggtctgcggctGCACGACCctgaaattggaacatca----------------------------------------------------------gcgcctccccgagtctgccgctgcacggccctcagactggaaca------tcagctcctcccctggtctgtggctgaacgaccctgaaactggaa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174372412 586 - 174439528 CCATGATCCTCAATTAGAAACAACAAAACCGGCTACTCCGCGGGTCTCCAGCTCCGCAaatcacaaactagaaaacaaagcATGACCCTATATCTCCAGCTCTACGACCCTCAACTAAAAATAACAACTCCAGCTCCTCCAcaggtctccagctccatgacccaCAAACTAGAATACAATGCTCCACCCTGTATCTCCAGCTCCACAACCCTCTATGAGAAACACCAACAACGGCTCCTCTGTGGATCTCCAGCTCCACGATCCTCAACTAGAAACAACAACAATGGCTCCAC----CACGTGTCTCCAACTCCA-AACCCTCAACCAGAAACACCAACGACACTTCCTACaagggtctccagctccacgacacacaaactagaaaacaacgcTCCACCCTGTATCTCCAGCTCCATGATCCTCAAACAAAGACACCAACAGCGTCCATTCCGCCATCGCCACCTCGATGACCCTCAACTAGAAACACCGAATCCGGCTCCTTCATGGGActccagctccacgaccctcacCTAGAAACACCAACTCCAGCTCCTCCAcaggtctccagctccacgacccaCAAACCAGAA i papAnu2.chr6 C 0 I 239 e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445148 33 + 91010382 I a score=39391.000000 s hg38.chr3_KI270937v1_alt 146908 98 + 165607 catcagctcccca---ccagatctccagctgcacagctctcaaacaggaacatca------gct--ccccacagggtctccagctGCACGGCTC--------------------------------------------------------------------------------------------TCAAACAAGAACATC s panTro4.chr3 201682439 190 + 202329955 catcagctcccca---ccagatctccagctGCACGGCTctcaaacaggaacatca------gct--ccccacagggtctccagctgcacggccctcaacctgcaacactggctccccaccgggtctccagatgcacggccctcaaactgcaacatcagttccccccgggtctccagctataccgtgtcaacctgGAACATC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2470009 100 - 202140232 CATCAGCTCCCCG---CTGGGTCTCCAGCAGCACGGCCCTCAACCTGGAACATCA------GCTCACCCCACCGGGTCTTCAGCTCCATGGCCC--------------------------------------------------------------------------------------------TCAACTTGGAACACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2906090 98 - 123690457 catcagctcttcc---ccaggtctgcagctacacgatcctgaaactggaacatca------gct--cttccccgggtctgcggctgcacgaccc--------------------------------------------------------------------------------------------tcaaaatggaacATC i nomLeu3.chr11 C 0 I 1032 s papAnu2.chr6 174373237 107 - 174439528 CTCCAACTCCACAACCCTGTATCTCCAGCTCCACAACCCTCTACAAGAAACACCAACAACGGCT--CCTCcgcgggtctccagctccacgatcc--------------------------------------------------------------------------------------------tcaactagaaacacc i papAnu2.chr6 I 239 C 0 e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445148 33 + 91010382 I a score=2664.000000 s hg38.chr3_KI270937v1_alt 147006 11 + 165607 ------AGCTCCCCACA- s panTro4.chr3 201682629 11 + 202329955 ------AGCTCCCCGCC- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2470109 11 - 202140232 ------GGCTCCCCACC- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2907220 11 - 123690457 ------AGCTCCTCCCT- i nomLeu3.chr11 I 1032 C 0 s papAnu2.chr6 174373344 18 - 174439528 aacaaTGGCTCCACCGCA i papAnu2.chr6 C 0 I 1240 e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445148 33 + 91010382 I a score=25781.000000 s hg38.chr3_KI270937v1_alt 147017 25 + 165607 GGGTCTCCAGCTGCACGGCCCTCAA s panTro4.chr3 201682640 25 + 202329955 GGGTCTCCAGCTCCACGGCCCTCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2470120 25 - 202140232 AGGTCTCCAGATGCACAGCCCTCAA i ponAbe2.chr3 C 0 I 285 s nomLeu3.chr11 2907231 25 - 123690457 GGGTTTGCGGCTGCAAGACCGTCAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174374602 25 - 174439528 gggtctccagctccacgaccctcaa i papAnu2.chr6 I 1240 C 0 s chlSab2.chr4 1445181 25 + 91010382 GGGTCTCCAGCTGCAGGGCCCTCAA i chlSab2.chr4 I 33 C 0 e calJac3.chr5 117216828 1040 - 159171411 T a score=144.000000 s hg38.chr3_KI270937v1_alt 147042 1 + 165607 C s panTro4.chr3 201682665 1 + 202329955 C i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2907256 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174374627 1 - 174439528 c i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1445206 1 + 91010382 C i chlSab2.chr4 C 0 I 13243 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T a score=15354.000000 s hg38.chr3_KI270937v1_alt 147043 51 + 165607 ------CTGCAACACTGGCTCCCCACCGGGTCTCCCGATGCACGGCCctcaaactgc s panTro4.chr3 201682666 51 + 202329955 ------CTGCAACACTGGCTCCCCACCGGGTCTCCAGATGCACGGCCctcaaactgg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2907257 51 - 123690457 ------CCGGAACATCAGCTCCTCCCCGGGTCCGCAGCTGCAAGACCCTCAAACCGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174374628 57 - 174439528 tAGAAACAAGAACTCCAGCTCCTccactggtctccagctccatgacccaCAAACTAC i papAnu2.chr6 C 0 I 1598 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=3564.000000 s hg38.chr3_KI270937v1_alt 147094 7 + 165607 aacatca s panTro4.chr3 201682717 7 + 202329955 aacatca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2907308 7 - 123690457 AACATCA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174376283 7 - 174439528 AACACCA i papAnu2.chr6 I 1598 I 2354 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=6155.000000 s hg38.chr3_KI270937v1_alt 147101 38 + 165607 gttcccc-ccgggcatacagctgcatgg-ccttaaactgg s panTro4.chr3 201682724 40 + 202329955 actccccaccgggtatacagctgcatggcccttaaactgg i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2907315 40 - 123690457 GCTCCTCCCCGGGTCCGCAGCTGCAAGACCCTCAAACCGG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e papAnu2.chr6 174376290 2354 - 174439528 I a score=21881.000000 s hg38.chr3_KI270937v1_alt 147139 77 + 165607 aacatcagctccccg-ctaggtctccaggagcacggtcctcaaactggaaca------tcagctccctgccaggtcaccagctg s panTro4.chr3 201682764 78 + 202329955 aacatcagctccccgcccgggtctccagatgcacagccctacaaccggaaca------tcagctccctgccgggtctccagctG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2907355 77 - 123690457 AACATCAGCTCCTCC-CCAGATCCGCAGCTGCAAGACCCTCAAACCGGAACA------TCAGCTCCTCCCCAGGTCCGCGGCTG i nomLeu3.chr11 C 0 I 183 s papAnu2.chr6 174378644 83 - 174439528 aactccagctcctcc-atgggtctccagctccacgaccctcaactagaaacaccaactccagctcctccactggtctccagctc i papAnu2.chr6 I 2354 C 0 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=8205.000000 s hg38.chr3_KI270937v1_alt 147216 24 + 165607 catggccctcaaactggaacatca s panTro4.chr3 201682842 24 + 202329955 CACGGCCCTCAAACTGGAATATCA i panTro4.chr3 C 0 M 1154 s nomLeu3.chr11 2907615 24 - 123690457 CAAGACCCTCAAACCAGAACATCA i nomLeu3.chr11 I 183 C 0 s papAnu2.chr6 174378727 24 - 174439528 catgacccaCAAACTACAAAACAA i papAnu2.chr6 C 0 C 0 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=29736.000000 s hg38.chr3_KI270937v1_alt 147240 281 + 165607 -cctccccgccaggtctccagctgcatggccctcaaattgcaacatca------gctcccatcagagcctccagctgcatggccatcaaactggaacatca-gctcccccgcgggtctccagctgcacagacctcaaacttgaacatcagc------tccccgccgggtcatcaactgcatggccctcaaactggaacatca-gctccacccctgggtctccagtagcacggccctacaactggaacatca------gcttccccctgggtctccggctgcacagccctacaaccggaacat s nomLeu3.chr11 2907639 280 - 123690457 -GCTCCTCCCCAGATCCGCGGCTGCAAGACCCTCAAACTGGAACATCA------GCTCCTCCCCAGGTCCGCGGCTGCAAGACCTTCAAACCGGAACATCA-GCTCCTCCCCGGGTCCGTGATTGCACCACCCTCAAAACGGAACATCAGC------TCCTCCCCGGGTCCGTGGCTGCAAGACCCCCAAACCGGAACATCA-GCTCCTCCCC-GGGTCTGTGGCTGCAAGACCCTCAAACCGGAACATCA------GCTCCTCCCCAGGTCTGCGGCTGCAATACCCTGAAACCAGAACAT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174378751 301 - 174439528 CGCTCCACCCCGTATCTCTGGCTCCACAATCCTCAACGAGAAACACCACCACCGGCTCCTACACGagtctccagctccacgacccaCACACTAGAAAACAATGCTCCACCCTGTATCTCCAGCTCCACAACCCTCAAGGAGAAACACCACCACCGTGTCCTCTGCAGGTCTCCAGCTCCACGccccacaaactagaaaacaatgcTCCACTCT-GTATCTCCAGAACCACAACCCTCTACGAGAAACACCAACAACGGCTCTTCcatgggtctccagctccacgatcCTCAACTAGGAACAC i papAnu2.chr6 C 0 I 683 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201682866 1154 + 202329955 M a score=6123.000000 s hg38.chr3_KI270937v1_alt 147521 44 + 165607 cagctccctgccgggtctccagctGCACAGCCCTCAAACTGG-AA s nomLeu3.chr11 2907919 45 - 123690457 CAGCTCCTCCAAGGGTCTGTGGCTGCAAGACCCTCAAACCGGTAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174379735 44 - 174439528 CAGCTCCTCCACGAGTCTCCATCTCCACgacccacaaactag-aa i papAnu2.chr6 I 683 I 419 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201682866 1154 + 202329955 M a score=1033.000000 s hg38.chr3_KI270937v1_alt 147565 12 + 165607 CATCAGCTCCCC s nomLeu3.chr11 2907964 12 - 123690457 CATCAGCTCCTC i nomLeu3.chr11 C 0 I 1067 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e papAnu2.chr6 174379779 419 - 174439528 I e panTro4.chr3 201682866 1154 + 202329955 M a score=0.000000 s hg38.chr3_KI270937v1_alt 147577 472 + 165607 GCTGAGTTCAAACTAttccagtttgagggccgtgcagctggagacccggcggggagctgatgttccagtctgagggccgtgcagctggagacccgcgggggagccgaacttccggtttgagggccatgcagctggatacccggtggggagctgaagttccagtttgagggccgtgaagctggagacccgttggggagctgaagttccagtttgagggccgtgaagctggagacccggtggggagctgatgttccagtctgagggccgtgcagctggagacccagtggggagctgatgttccagtctgagggccgtgcagctggagacccggtggggagctgaacttccagtttgagggccatgcagctggatacccggtggggagctgaagttccagtttgagggccattcagctgaaagacttggggagaagctgatgttccagtttgagggccgtgcagctggagactcg e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e papAnu2.chr6 174379779 419 - 174439528 I e nomLeu3.chr11 2907976 1067 - 123690457 I e panTro4.chr3 201682866 1154 + 202329955 M a score=10728.000000 s hg38.chr3_KI270937v1_alt 148049 119 + 165607 gggatagccgatgttgcagtttgagggccgtgcagctggagacccgggtgggaaccgatgttccagtttgggagccatgcagctggaggcactgcggggagcagatgttccagtttgaT s panTro4.chr3 201684022 119 + 202329955 GGGGTAGCTGATGTTGCAGTTTGAGGGCCGTGCAGCTGGAGACCCGGGTGGGAACTGATGTTCCAGTTTGGGAGCCATGCAGCTGGAGGCACTGCGGGAAGGAGATGTTCCAGTTTGAT i panTro4.chr3 M 1154 C 0 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e papAnu2.chr6 174379779 419 - 174439528 I e nomLeu3.chr11 2907976 1067 - 123690457 I a score=272394.000000 s hg38.chr3_KI270937v1_alt 148168 1325 + 165607 GTTCCTCCCTGGGTCTCCAGGTGCACGGCCATC------AAACTGGAACATCAGCTCCCC-------------------GGCCCTCAAACCGGAACATCA-GCTCCCCGCCGGATCTCCAGCTGCACAGCTGT-------------CAAC----ATCAGctcctccccgagtcctcagctgcacgaccctcaagttagaaca------tcagcttctccccaagtcttcagctgcgtgaccctcaatctagaaca------tcagttcctctacaggtctgcagctgcaagaccctcaatctagaacgtca-gctcctccctgagtctccagctgaaacaccctcaaaacgaa----caacatcagctcctccctgagtcttcagctgcacgacgctcaatctacaacatca------gctcctgtctggttc-----------------------------------------------tccagctgcacgaccctc------aaactacaacctcagctcttccccgagtcttctgctgcatgaccctcaatctagaacat-aagctcctctctcggtgtccacctgtagggacctcaaattagaacg------tcagctcctcccagagtcttcagctgcatgaccctcaatctttaacatca-gctcctctccgggtctgcagctgcatgaccctaaaaa---tacacgagcagctcctccc---tgaatcttcagctgtacgaccctc------aaactacaacatcagctcctgtctgcatctctagctg----------------------------------------------cagggccctcaaactagaatatca------gctcctccccgatttttcacctgcatgaccctcaaactagaacatca------gctcctgtacagatttccaactgtagggccctcaaactagaacat------cagctcctccccaagtcagcagctgcaagaccctcaaattagcaactca-gctcctcccggagtcttcagctgcatgaccctc------aatctcgaagatcagatactctccgggtcttcagctgtagggccctcaaactataacatcag------ctcctctccgagtattcagctgcacgaccctcaatctcgaacatcag------cacctcttcaggtctgcagctgtagggccctcaatctagaacatca-gctcctccctgagtcttctgctgcacgaccctca-----------------------------------------------aactag-------aatctcagctcctccc------------------------------------------------aagtcttcagctgcacgaccctcaaactagaacc-------tcagctcctccctgagtcttcagctgcatgacccttaatctagaacatca-gctcctc-----------------------------------------------cccgagtcttcagctgcacgaccctcaatctagaacatca------gctcctctccaggtctgcagctgcaagaccttcaaactagaa-----------------------------------catcagctcctctccaggtctgcagctgcaagaccttcaaactagaacatca-gctcctccccgagtcttcacctgcatgaccctca s panTro4.chr3 201684141 1357 + 202329955 GTTCCTCCCTGGGTCTCCAGGTGCACGGCCATC------AAACTGGAACATCAGCTCCCC-------------------GGCCCTCAAACCGGAACATCA-GCTCCCCGCCGGATCTCCAGCTGCACAGCCAT-------------CAAC----ATCAGctcctccccgagtcctcagctgcacgaccctcaagttagaaca------tcagcttctccccaagttttcagctgcgtcaccctcaatctagaaca------tcagttcctctccaggtctgcagctgcaagaccctcaatctagaacgtca-gctcctccctgagtctccagctgaaagaccctcaaaacgaa----caacatcagctcctccccgagtcttcagctgcacgacgctcaatctagaacatca------gctcctgtctggttc-----------------------------------------------tccagctgcacgaccctc------aaactacaacctcagctcttccccgagtcttctgctgcatgaccctcaatctagaacat-aagctcctctctgggtgtccacctgtagggacctcaaattagaatg------tcagctcctcccagagtcttcagctgcatgaccctcaatctttaacatca-gctcctctccgggtgtccacctgtagggacctcaaat---tagaATGTCAGCTCC------------------NNNNNNNNNNNNN------NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------------------------NNNNNNNNNNNNNNNNNNNNNNNN------NNNNNNNNNNNNNNNNNNNNNNNNNNGACCCTCAAACTACAACATCA------GCTCCTGTCTGCATCTCTCGCTGCAGGGCCctcaaactagaatat------cagctcctccccgattcttcacctgcatgaccctcaaactagaacatca-gctcctccccaagtcagcagctgcaagaccctc------aaattaccacctcagctcctcccggagtcttcagctgcacgaccctcaatctcgaagatcag------atactctcggggtcttcagctgtagggccctcaaactataacatcag------ctcctctctgagtattcagctgcacgaccctcaatctcgaacatca-gctcctcttcaggtctgcagctgtagggccctca-----------------------------------------------atctag-------aacatcagctcctccct-----------------------------------------------gagtcttctgctgcacgaccctcaaactagaatc-------tcagctcctccc-gagtcttcagctgcacgaccctcaaactagaacgtca-gctcctccctgagtcttcagctgcatgacccttaatctagaacatcagctcctccccgagtcttcagctgcacgaccctcaatctagaacatca------gctcctctccaggtttgcagctgcaagaccatcaaactacaa-----------------------------------catcagctcctctccaggtctgcagctGCAAGACCctcaaactagaacatca-gctcctccccgagtcttcacctgcatgaccctca i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2909043 1484 - 123690457 GCTCCTCCCTGGGTCCGTGGCTGCAAGACCCTC------AAACCGGAACATCAGCACCTCCTCGGGGCCGCGGCTGCAAGACCCTCAAACCGGAACATCA-GCTCCTCCCCGGGTCTGCGGCTGCACGACCCT-------------CAAAGCAGATCAGCTCCTCGCCGGGcctgcggctgcacgaccctcaaactggaaca------tcagctcttccctgtgtctgcggttgcacgaccctcaaactggatca------tcagctcctctccgggaatgtggctgcacgaccctcaaactggaacatca-gatctttcccggatctgcgggtacacgaccctcaaactgg------aacatcagctcctcccctggtctgcggttgcacgaccctcaaactggaacatca------gctcttccatggatctgcgggtacacgaccctcaaactggaacatcagctcctcccctggaatgcagctgcacgaccctc------aaactggaatatctgctcttccccgggtctgcgcctgcactaccctcaaactggaacat-tggctcctccccgcgttttcagctgcacggacctcaaactgaaaca------ccggcgcctctcagggtctttggctgcaagatcctcaaactacaacatcg-gctcctctccaggtctgcggctGCACGACCCTCAATG---TAGAACACTGGCACCTCCC---CGGGTCTGCGGCTGCAAAACCCTC------AAACAAGAACATCCGCGCCTCCACGGCTCTGCGGCTGCAAGACCCTGAAACCAGAACATCAGCTCCTCCCTAGTCCACGGCTACAAGACCctcaaactggaccatca------gctcctccctgggtttgcggctgcaagaccgtcaaaccggaacatca------gctcctccccgggtccgcagctgcaagaccctcaaaccggaacat------cagctcctccccgggtccgcggctGCAAGACCCTCAAACTGGAACATCA-GCTCCTCCCCAGGTCCGCGGCTGCAAGACCCTC------AAACCGGAAAATCAGCACCTCCTCGGGTCCGCGGCTGCAAGACCTTCAAACCGGAACATCAG------CTCCTCCCCGGGTCCGTGATTGCACCACCCTCAAACCAGAACATCAG------CTCCTCCCCGGGTCTGCGGCTGCACGACCCTCAA---AGCAGATCA-GCTCCTCGCCGGGCCTGCGGCTGCACGACCCTCA-----------------------------------------------AACTGG-------AACACCAGCTCCTCCGCTGGTCTGCGGATGCAAGACCCTCAAACCGGAACATCAGCTCCCACGGAGGTCTGCGGCTGCACGACCctcaaattggaaaa-------tcagcgcctccctgggtctgcggctgcaggaccctcaaactggaacatca-cctcctc-----------------------------------------------ccctggtctgcgtttgcacgaccctcaaactggaacatca------gctcttccctggatctgcgggtacacgaccctcaaactggaa-----------------------------------catcagctcctcccctggaatgcagctgcacgaccctcaaactggaatatct-gctcttcccggggtctgcggctgcactaccctca i nomLeu3.chr11 I 1067 C 0 s papAnu2.chr6 174380198 1551 - 174439528 GTTCCTCCATGGGTCTCCAGCTTCATGACcctcaactagaaacaccaacacCAGCTCCTCcacgggtctccagctccatgacccacaaactagaaaacaacgcTCCACCCTGTATCTCCAGCTCCATGACcgtaaaacaaaaacaccaac----agCGGCTACTTTGC-CGTTTCCATCTCGATGACcctcaactagaaacaccaactccagctcctccatgggtctccagctccacgaccctcaactagaaacaccaactccagctcctccactggtctccagctccatgacccaCAAACTACAAAACAACGCTCCACCCTGTATCTCCAGCTCCACAAACatcaactagaaacaccaactGCAGTTCCTCCGCGAGTCTCCAGCTCCAAAACCCTCAACTACAAACACCAACATGGGCTCCTCTGCACGTC-----------------------------------------------TCCAGCTCCATGATCCTCAATTAGAAACAACAAAACTGGCTCCTCTGCGGGTCTCCAGCTCCGCAAACCACAAACTCGAAAACAAAGCATCACCCTATatctccagctccatgaccctcAACTAAAAACACCAACTCCAGCTCCTCCAcaggtctccagctccatgacccaAAAACCAGAAAACAGCGCTCCACCTTGTATCTCTAGCTCCACAGCCCTGAATGAGAAACACGACCAGCTTCTCCTCCACAAGTCTCTAGCACCATGACCCTCAGCAAGAAACACTAACACCGGATCCTCCCCGGGACTCCAGCTC----------------------------------------------CACCATcctcaactagaaacaccaacacCGGCTCCTCcgcgggtctccagctccacgatcctcaactagaaacaccaacaaTGGCTCCTCCCTGTGTCTCCAACTCCAA-ACCCGCAACCAGAAACACCAACGACAGCTCCTCcacgggtctccagctccacgacccacaaactagaaaacagcGCTCCACCCTGTATCTACAGCTCCACAACTCTCAACGAGAAACACCAACAACGGCTCCTCCGCAGATCTCCAGCTCCACGATCCTCAAGTAGAAACACTAACAATGTCTCCTCCGCatgtctccaact-cccaaccctCAACCACAAACACCAATGACATCTCCTCcacgggtctccagctccacgacccacaaactagaaaacaacgcTCCATCCTGTatctccagctccacgaccctcaaagACCCCCACAGCGGCTATTCTGCCATCAACACCTCGATGACcctcaactagaaacaccaactcCAGCTCCTGCAT-----------------------------------------------GGGTCTCCAGCT-CACGACcctc-aactagaaacaccaactccagctcctccactggtctccagctccatgacccaCAAACTACAAAACAACGCTCCAC-----------------------------------------------CCCGTATCTCTGGCTCCACAATCCTCAACGAGAAACACCACCACCGGCTCCTCCAcaggtctccagctccacgacccacaaactagaaaacaatgcTCCACAACCCTCAACGAGAAACACCACCACCGGCTCCTCTgcgggtctccagctccacacCCCACGAACTAGAAAACAACGCTCCACCCTGTATCTCCAGCTCCACAACCCTCA i papAnu2.chr6 I 419 C 0 e ponAbe2.chr3 2470145 285 - 202140232 I e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=201379.000000 s hg38.chr3_KI270937v1_alt 149493 397 + 165607 ------aactagaacatcagctcctctccaggtctccagctgcacgacc-----ctcaaagtagaacatcagctcctctccgggtctgcagctgcaagatcctcaaactagaacatcag------ctcctctccaggtctgcagctgc-----------------------------------------------aagaccctcaatct---agaacatcagctcctctccaagtgtgcagctgcacgaccctcaatctagaacatcagctcctctccaggtctgcagctgcaagaacctcaaact--a-gaacatcagctcctctccaggtctccagctgcacgaccctcaaactagaacatcagctcctctccgcgtctgcagctccacgaccctcaatc---tagaacatcagctcctccccgggtcttcagctgcacgaccctcaaactagaacatcagctcctcc s panTro4.chr3 201685498 397 + 202329955 ------aactagaacatcagctcccctccaggtgtccagctgcacgacc-----ctcaaagtagaacatcagctcctctccaggtctgcagctGCAAGATCctcaaactagaacatcag------ctcctctccaggtctgcagctgc-----------------------------------------------aagaccctcaatct---agaacatcagctcctctccaagtgtgcagctgcacgaccctcaatctagaacatcagcttctctctgagtcttcagctgcatgacccttaatct--a-gaacatcagctcctctccgagtcttcagctgcacgaccctcaatctagaacatcagctcctctccaggtctgcagctgcaagaccctcaaac---tacaacatcagctcctctccgggtctGCTGCTGCAAGACCCCTCAACTAGAACATCAGCTCCTCC i panTro4.chr3 C 0 M 4730 s ponAbe2.chr3 2470430 399 - 202140232 ------AACTAGAACATCAGCCCCTCCCCGAGCCTTCAGCTGCATGACC-----CTCAATCTAGAACATCAGCTCCTCTCCGAGTCTGCAACTGCAAGAACCTAACAGTAGAACCTCAG------ctcctcctggggtctgcagctgg-----------------------------------------------aagatccactgact---agaatatcagctcctgtccgggtctccagctccatgacactcaatcaagaTTATCAGCTCCTCCCTGAGTCTCCAGCTGAAAGACCCTCAACGCGAA-CAACATCAGctcctcccagagtcctcaactgcaggaacctctaactacaacatcagctcctccccgagtcttcagctgcatgaccctcaatc---tagaacatcagctcctctccgggtctgcagctgcaagaacctaacagtagaacatcagctcctcc i ponAbe2.chr3 I 285 C 0 s nomLeu3.chr11 2910527 443 - 123690457 ------aactggaacattggctcctccccgggttttcggctgcacgaac-----ctcaaactgaaacaccggcgcctctcagggtctttggctgcaagatcctcaaactacaccatcgg------ctcctctccaggtctgcggctGCACGACCTTCAATGTAGAACATTGGCACCTAACCGGGTCTGTGGCTACAAAACCCTCAAACA---GGAACATCCGCGCCTCCACGGGTCTGCGGCTGCAAGACCCTGAAACCGGAACATCAGCTCCTCCCTG-GTCCGCGGCTGCAAGAACctcaaacc--g-gaacatcagctcctccaagggtctgtggctgcaagaccctcaaaccggaacatcagctcctccccgggtccgcggcttcaagaccctcaaac---aagaacatcagctcctccccgggtccgcagctGCAAGACCCTGAAACCGGAACATCAGCTCCTCC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174381749 418 - 174439528 ATGAGAAACACCAACAACGGCTCCTCcgcgggtctccagctccacagcCTAAGTCATGAGAGGCAGTACTGGCTCTTCCCGTAGATTCCAGATCCGAGACCCTCAGATTCGTATCACAGGACCTTTTCCCCACTAGATCTCCAGCTGC-----------------------------------------------ACAATACTCAAACTGCAACAACATCAGCCCCTCCTAGGGTGTCCAGCTGCACGACCCTCAAGCTAGAA---CAGCTCCTCCCAGGGTCTTCAGCTCCATGGCCCTCAAACT--ATAAAGAACAGCTCCTGCCTGCATCCCCAGCTCTACAACCATCAAACTAGAACACCAGTTCCTCTCCAGCTGTCCAGCTCCACGGCtctcaaatgaaaacaacatCAGCTCCTCCCTAGTTCTCCAGCTGCACGACCCTCAAATTGGAATATGAGCTCCCCG i papAnu2.chr6 C 0 C 0 e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I a score=30765.000000 s hg38.chr3_KI270937v1_alt 149890 125 + 165607 ctgggtctgcagctggaagatccactaactagaacatcaactcctgt---------------------------ctaggtttccagctccatgaccctcaatcaagattatcagctcctctctgagtccc-cagctGAAAGACCCTCAACGTg s ponAbe2.chr3 2470829 126 - 202140232 ctgggtctgcagctggaagatccactgactagaacatcagctcctgt---------------------------ccgggtctccagctccatcaccctcaatcaagaTTATCAGCTCCTCCCTGAGTCTAAGAGCTGAAAGACCCTCAACGCG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2910970 118 - 123690457 CCAGGTCCATGGCTGCAGGACCGTCCaactggaacatcagctccttc---------------------------acgggtctgtaa------gaccctcaaacccgaatatcagctcctccctg-gtctg-cagctgcgagaccctcaaagca i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174382167 152 - 174439528 CCGTGTCTCCAGCTGCATGGCCCTTAAACTGGAACATCAGCTTCTGGGCCCTGAAACTGGAACATCAGCTCCCACCGGGTCTCCAGCTGCATCGCCCTCAAAGTGGAACATCGGCACCACCCTGAATCTC-CAGTTGCACGGCCCTCAAACTG i papAnu2.chr6 C 0 C 0 e calJac3.chr5 117216828 1040 - 159171411 T e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201685895 4730 + 202329955 M a score=84599.000000 s hg38.chr3_KI270937v1_alt 150015 209 + 165607 aacaa----catcagctcctcccgaagtcctcaactgcatgaccctca------aactacaacatcagctcctccccgagtattcagctgcatgaccctcaat------ctagaacatc-----------------------------------------------agctcctctctgactctgtagctggaagatccactaactagaacatca------gctc-ctgtctgggtctccagctccatgaccctta------atcaagaTTATCAGCTCCTCCCTG s ponAbe2.chr3 2470955 254 - 202140232 AACA-----CATTAGctcctccctgagtcctcaactgcatgaacctca------aactacaacatcagctcctcct-gagtcttcagctacatgactctcaat------ctagaacatcctctcctctccgggtctgcagctgcaagaacctaacagtagaacatcagctcctccctgggtctgcagctggaagatccactaactagaacatca------tctc-ctgtccaggtctccagctccatgaccctca------atcAATATTATCAGCTCCTCCCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2911088 207 - 123690457 ga-a-----catcagctcctccccaggtctgcagctgcaatactccga------aacgggaacatcagctcctccccgggtctgcggctGCAAGACCCCCAAT------CCGGAACATC-----------------------------------------------AGTTCCTCCCCGGGTCTGCGGCTGCAAGACCCTCAAACCAGAACTTCA------GCTC-CTCCCCGGGTCCGCAGATGCAAGACCCTCA------AACCGGAATATCAGCTCCTCCACG i nomLeu3.chr11 C 0 I 846 s papAnu2.chr6 174382319 208 - 174439528 GA-A-----CATCAACTCCCCCACGGTTCTCCAGCTGCACGGCCCTCA------AACTGGAACATCAGCTCCCCTCCTGGTCTCCAGCTGCACGGCCCTCAAA------CTGGAACATC-----------------------------------------------AGCTCCCCTCCTGGTCTCCAGCTGCACGGTTCTCAAACTAGAACATCA------GCTCTCTTGCCATGTGTCCAGCTGCACGGACCTCT------AACTGCAACATCAGCTCCCCGCTG i papAnu2.chr6 C 0 C 0 s calJac3.chr5 117215788 232 - 159171411 ----AGCAGCACCGGctcctccccagat-tccagctcctcgaccctcaaacatcaactacagtgccagctcctccccgggtctacagctccacaaacctcaaactacagctgcagcacc-----------------------------------------------agctcctccccgggtctccagctccacaatcctcaaactacaacagcagcaccggctc-ctccccgggtctccagcttcctgaccctcaaacatcaacagcaacactagctcctcccca i calJac3.chr5 T 1040 C 0 e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201685895 4730 + 202329955 M a score=70413.000000 s hg38.chr3_KI270937v1_alt 150224 246 + 165607 AGTCCCCAGCTGAAAGACCCTCAACAC----GAACAACATCAGctcctcccaaagtcctcaactgcatgac-----------------------------------------------cctcaaact------acaacatcagctcctccccgagtcttcagctgcatgaccctctatctagaa------catcagctcctccccgggtctgcagctgcacgaccctcaatctagaacatcagctcctccccg-ggtctgcagctgcacgaccctcaatctag---------aacatcagctcctccccgggt-------------------------------------------------ctgcag s ponAbe2.chr3 2471209 339 - 202140232 AGTCTCCACCTGAAAGACCCTCAACGC----GAACA---TCAGCTCCTTCCCAAGTCTTCAGCTGCACGACTCTGAATGTAGAACATCAGCTCCCTTCCAGGTCTGCAGCAGCACGACCctcaaatt------agaacatcagctcctctccagctctgcagctgcaagaccctcaaactagaa------catcagctcctttctgggtctgcagctgcaagactctaaaactagaacatcaccttctctcca-ggtctccagttCTGTGACCCTAAATGTAG---------AACATCAGCTCCTCCCTGAGTGTCCAAGTGAAAGACCCTCAAAGCGAACAACATCAGCTCCTCCTCAAGTCTTCAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912141 242 - 123690457 GGTCTGCAGCTGCAAGACCctaaaacc---ggaaca---tcagctcctccccgggtctgcgcctgcaagac-----------------------------------------------cctgaaacc------ggaacatcagctcctccccgggtgtgtggctgcaagacccttaaactggaa------catcagctcctccctgggtctgcggctgcaagacgcccaaaccagaacatcagctcattcccg-ggtc-gcagctgcaagaccctcaaaccag---------aacatcagctccttcccgggt--------------------------------------------------cgcag i nomLeu3.chr11 I 846 C 0 s papAnu2.chr6 174382527 197 - 174439528 -----------------------------------------------------AGTCTCCAGCTGCATGGT-----------------------------------------------GCTCAAACT------GGAACATCAGCTCTCTGCCCTGTGTCCACCTGCACAGCCCTCAAACTGGAA------CATCAGCTCCCCACTGGGTCTACAGCAGCACTGCCCTCAAACTGGAGCATTAGCTTACCCCTG-TGTGTCCAGCTCCCCGGCCCTCCAATTGG---------AACATCAGCTTCCTGATGAGT-------------------------------------------------CTCCAG i papAnu2.chr6 C 0 M 755 s calJac3.chr5 117216020 270 - 159171411 ggtctccagattcatgatcctcaaattacagcagcagcaccggctcctccctgggtctccagctcaacaaC-----------------------------------------------TCTCAGACTTGAGAGGCAGCACTGGCTCCTCCCGAAGCCTCCAGCTCCCCAACCCTAAAACTACAACAGCAGCACCAGCTCCTCCCTGGATCTCCAGCT-CACAACCTTCAAACTTCAAC-TGTGCTCCTCCCTGAGGCCATCATCTCCATGACCCTCAGAATTGCATGGTGATAGCACCGGCTCCTCCCTGGAT-------------------------------------------------CTCCAG i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201685895 4730 + 202329955 M a score=5276.000000 s hg38.chr3_KI270937v1_alt 150470 16 + 165607 ctgcacgaccctcaat s ponAbe2.chr3 2471548 16 - 202140232 CTGCAAGACCCTCAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912383 16 - 123690457 ctgcaagaccctcaaa i nomLeu3.chr11 C 0 C 0 s calJac3.chr5 117216290 16 - 159171411 CTCAATGACTCTCAGA i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445207 13243 + 91010382 I e papAnu2.chr6 174382724 755 - 174439528 M e panTro4.chr3 201685895 4730 + 202329955 M a score=55499.000000 s hg38.chr3_KI270937v1_alt 150486 123 + 165607 ctagaa------catcagctcctccccgggtctgcagctgcacgaccctcaatctagaa------catcagctcctccccgggtctgcagctgc-acgaccctcaatctagaa------catcagctcctccccgggtctgc s ponAbe2.chr3 2471564 123 - 202140232 CTAGAA------CATCAGctcctctccaggtctgcagctgcatgaccctcaaacaagaa------catcagctcctctccaggtatgcagctgc-aaaaccttcaatctagta------catcagttcctctccaggtctgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912399 124 - 123690457 ctggaa------catcagctcctccacggctccgcggctgcaatactctgaaaccggaa------catcagcttctccccggttctacggctgcaaagaccctcaaaccggaa------catcggctcctccccgggtctgc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174383481 123 - 174439528 CTGGAA------CATCAGCTCCCTGCCAGGTATCCTGCTTCATGGCCCTAAAAATGGAA------CATTAGCTCCCCGTAGGGTGTCCAGCTGCACGGACCTTAAAACTGGAA------CATCGGCTCC-CCCCGGATCTAC i papAnu2.chr6 M 755 C 0 s calJac3.chr5 117216306 141 - 159171411 CTTGAAAGGCAGCATCGGCTCCTCACCAAGGCTCCAGCTCCAAGACCCTCACACTAGAACAGCAGCAGCAGCTGCACCTTGGGTCTCCAGCTCC-ACCACCCTCAAAGAAGAACAGCAGCACCGGctcctccctgggtctcc i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445207 13243 + 91010382 I e panTro4.chr3 201685895 4730 + 202329955 M a score=49619.000000 s hg38.chr3_KI270937v1_alt 150609 57 + 165607 agctgcacgaccctcaatctagaa---------catcagctcctccccgggtctgcagctgcacga s panTro4.chr3 201690630 57 + 202329955 agctgcacgacactcaaactagaa---------catcagctcctccccgtgtctgcagctgcacga i panTro4.chr3 M 4730 C 0 s ponAbe2.chr3 2471687 57 - 202140232 agctgctcgaccctcaaactagaa---------catcagctcctctccaggtctgcagttgcaaga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912523 57 - 123690457 ggctgcaagatcctcaaaccggaa---------catcagctcctccccaggtcttcggctgcaaga i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174383604 57 - 174439528 AGCAGCACAGCCCTCAAACTGGAA---------CATCAGCTCCCCCTCAGGTCTCCAGCTGCACGG i papAnu2.chr6 C 0 C 0 s calJac3.chr5 117216447 66 - 159171411 agctccaccaccctcagatctgaataccagtagcaccagctcctgtctgggtctccagttctatga i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1445207 13243 + 91010382 I a score=166012.000000 s hg38.chr3_KI270937v1_alt 150666 164 + 165607 ccctcaatctagaa------catcagctcctccccgggtctgcagctgcacgaccctcaatctagaaca---------tcagctcctccccgggtctgcagctg-----cacgaccctcaatct---agaa------catcagctcctccccgggtctgcagctgcacgaccctcaaggtagaacatcagctc s panTro4.chr3 201690687 164 + 202329955 cactgaaactagaa------catcagttcctccccgggtctgcaggtgcatgaccctcaatctagaaca---------tcagctcctctccgggtctgcagctg-----catgacactcaaact---agaa------catcagctcctccccgggtctgcagctgcaggaccctcaaagtagaacatcagctc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2471744 164 - 202140232 ccctcaaactagaa------cataagctcctctccagctctccagctgcacgaccctcaatctagaaca---------tcagctcctcctcaagtcttcaggtg-----caagaccctcaatct---agaa------catcagctcctctccgggtctgcagctGCAGGGCCCTCAAGGTAGAACATCAGCTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912580 164 - 123690457 cccccaaactagaa------catcggctcctctccacgtctgcagctgcaacatcctcaaactggaaca---------tcagctcctcaccgggtctccagcta-----cacggccctcaatct---acaa------catcaatgcctctccgggtctgcagCTGCAGGGACCTCACGGTAGAACATCAGCTA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174383661 147 - 174439528 CCCTCAAACTGGAA------CATGAGCTCC--------TCTCCAGTTGCAGGACACTAATACTAGAAAA------ATGCCAGCTCCTCCTGGGTTCTACAGCTG-----CGCAACCCTCAAACTAAAGAAA------CGCCAGCTCCTCTCTGGGTCTGCAGCTGCATGAACCTCAAA--------------- i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1458450 162 + 91010382 ccctcaaactggaa------catcagctcc-ccccagatctacagctgcacggccctcaaactggaaca---------tcagctccctgctgggtctccagcta-----cacagccctcaaact---ggaa------cgtcggctcagccctggg-ctccagctgcacggccctcaaactggaacatcagctc i chlSab2.chr4 I 13243 I 1584 s calJac3.chr5 117216513 188 - 159171411 ccttcaaactagaacaacggcaccagttcctcccagagtctcaagctccacgaccctcagacctaaacaaaaacaacactggctcctccctgggtctccagcttcaacccaAGACCCTCAAACA---AGAACAGCAGCACCAGCTCCTCCCCAGGGCTCCAGCTCCACCATcctcagacttaaacaataac-- i calJac3.chr5 C 0 C 0 a score=6412.000000 s hg38.chr3_KI270937v1_alt 150830 15 + 165607 ttccccgagctaaaa s panTro4.chr3 201690851 15 + 202329955 ttcCCCGAGCTAAaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2471908 15 - 202140232 CTCCCCGAGCTAGaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912744 15 - 123690457 CTCCCCGAGCTAGAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174383808 6 - 174439528 ---------CTAGAT i papAnu2.chr6 C 0 C 0 s calJac3.chr5 117216701 8 - 159171411 -------aaccgcag i calJac3.chr5 C 0 C 0 e chlSab2.chr4 1458612 1584 + 91010382 I a score=186808.000000 s hg38.chr3_KI270937v1_alt 150845 139 + 165607 cacctctcccacctggatctccagctccacgagtctcaca---gaacagccacactggctccttcattgtcttcagctccacaaC-------CTAAGACATCAGTGGGAGCACTGGCTCCTCCCTGGACCTCCAGCTCAACGACTCTCA s panTro4.chr3 201690866 139 + 202329955 cacctctcccacctggatctccagctccacgagtctcaca---gaacagccacactggctccttcgttgtcttcagctccacaaC-------CTAAGACATCAGTGGGAGCACCGGCTCCTCCCTGGACCTCCAGCTCAACGACTCTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2471923 139 - 202140232 cacctctcccacctggatctccagctccacgactctcaca---gaacagccacactggctccttcattgtcttcagctccacaaC-------CTAAGACATCAGTGGGAGCACCGGCTCCTTCCTGGACGTCCACCTCAATGACTCTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912759 137 - 123690457 CACCTCTCCCACCT-GATCTCCAGCTCCACGACCCTCACA---CAACAGCCACACTGGCTCCTTCATTGTCTTCAGCTCCTCAAC-------CTAAGACATCAGCGGCAGCACCGGCTCCTCCCTGGACGTCCAGCTCAATGACTCTC- i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174383814 141 - 174439528 CACCTCTCCC-CCTGGatctccagctccacgaccctcacAGAGGAATAGCCACACCGGCTCCTTCACTGTCTTCAGCTCCACAAC-------CTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCTCA i papAnu2.chr6 C 0 I 8881 s chlSab2.chr4 1460196 139 + 91010382 cacctctccc-cctggatctccagctCCACGACCCTCACAGAGGAACAGCCACACCAGCTCCTTCACTGTCTTCAGCTCCACAAC-------CTAAGACATCAGTGGCAGCACCAGCTCCTCCGTGGACCTCCAGCTCAACGACTCT-- i chlSab2.chr4 I 1584 C 0 s calJac3.chr5 117216709 131 - 159171411 -----ctcctctgtgggtctccagctccacgactctcaaa---caaaaacaccaccactcctccctgggtttccagctccatgaccctcgaactagaacaaca----------ctgcacctccctgggtctccagctcgacaaccctcc i calJac3.chr5 C 0 C 0 a score=-997.000000 s hg38.chr3_KI270937v1_alt 150984 2 + 165607 TA s panTro4.chr3 201691005 2 + 202329955 TA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472062 2 - 202140232 TA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912896 1 - 123690457 -A i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174392836 2 - 174439528 CA i papAnu2.chr6 I 8881 I 4855 s chlSab2.chr4 1460335 2 + 91010382 TA i chlSab2.chr4 C 0 C 0 s calJac3.chr5 117216840 1 - 159171411 c- i calJac3.chr5 C 0 C 0 a score=431714.000000 s hg38.chr3_KI270937v1_alt 150986 294 + 165607 GACTTAAAAGGCAGCACCTGCTCCTCCCCAAGGCTCCATCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCACCTCCTCTCCAGGTCTTCAGCCCCATGTCCCTCCCTGAACAATCCCTTCTCATGAAATTCAGCAGTCAAGAAATCTGCAGCGGAAGTAAATGAATAAACGTTTTGTTTTCAAATTGATATCTCTTTTATGTTCA------TGAATTAACTTTTCTACTTTCCATTAGCCTTGCAATCTACTTATGTCC-AAGGTGAAACAGAAACACACCATTTGAAATCACGTTT s panTro4.chr3 201691007 294 + 202329955 GACTTAAAAGGCAGCACCTGCTCCTCCCCAAGGCTCCATCTTCACCACCCTCAGATTTGAACAGCGGTAGCACCACCTCCTCTCCAGGTCTTCAGCCCCACGTCCCTCCCTGAACAATCCCTTCTCATGAAATTCAGCAGTCAAGAAATCTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATTGATATCTCTTTTATGTTCA------TGAGTTAACTTTTCTACTTTCCATTAGCCTTGCAATCTACTTATGTCC-AATGTGAAACAGAAACACACCATTTGAAATCACGTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472064 293 - 202140232 GACTTAAAA-GCAGCACCTGCTCCTCCCCAAGGCTCCATCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAGCTCCTCTCCAGGTCTTCAGCCCCACGACCCTCCCTGAACAATCCCTTCTCATGAAATTCAGCAGTCAAGAAATCTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCCATATCTCTTTTATGTTCA------GGAGTTAACTTTTCTACTTTCCATTAGCCTTGCAATCTACTTATGTCC-AATGTGAAACAGAAACACACCATTTGAAATCACGTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2912897 294 - 123690457 GACTTAAAGGGCAGCACCTGTTGCTCCCCAAGGCCCCATCTCCACCACCCTCAGATTTGAACAGCGGTAGCACCAGCTCCTCTCCAGGTCTTCAGCCCCACGACCCTCCCGGAACAATCCCTTCTCATGAAATTCAGCAGTCAACAAAACTGCAGCTGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGGTATCTCTTTTATGTTCA------TCAGTTAACTTTTCTATTTTCCATTAGCCTTGCAATCTACTTATGCCC-AATGTGAAACAGAAACGCACCATTTGAAATCACGTTT i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174397693 294 - 174439528 GACTTAAAAGGCAGCGTCGGCTCCTCCCCAAGGCTCCAGCTCCACCAACCTCAGATTTGAATAGCAGTAGCACCAGCTCTTGTCCGGGTCTTCAGCCCCACAACCCTCCCTGAACAATCCCTTCTCACGAAATTCAGCAGTCAAGAAAACTGcagcagaagtaaatgaataaatgttttgttttcaaatcgGTATCTCTTTTATGTTCA------TGAGttaacttttctattttccattaacCTTGCAATCTACTTATGTCC-AATGTGAGACAGAAACACACCAGTTGAAATGATgttt i papAnu2.chr6 I 4855 I 328 s chlSab2.chr4 1460337 289 + 91010382 GACTTAAAAGGCAGCGTCGGctcctccccaaggctccagctccac---cctcagatttgaacagcggtagcaccagctcctgcccgggtcttcagccccacaaCCCTCCCTGAACAATCCCTTCTCACGAAATTCAGCAGTCAAGAAAACTGCAGCGGAAGTAAATGAATAAATGTTTTGTTTTCAAATCGATGTATCTTTTATGTTCA------TGACTTAACTTTTCCACTTTCCATTAACCTTGTAATCTACTTATGTCC-AATGTGAGAC--AAACACACCAGTTGAAATGACGTTT i chlSab2.chr4 C 0 C 0 s calJac3.chr5 117216841 258 - 159171411 --cctagaA--CAGCA---GCACTTCCTTGCACCTCCAGCTCAACAACTCTCATACTTGAAAGACAGCA--------------------------CCTCATTAC----------CAATCCCTTCTCATGAAATTCAGCAGTCAAGAAAACTGCAGAGGAAGTAAATGAATAAATGTTTTGCTTTCAAATCGATGTTTCTTTTATGTTCACACGAGTCAGGAAACTTTTCTACTTGCTGTCAACCTTGCAACCTACCTATGTCCTAATGTAAGATAGAAATCCACCATTCGAAATGACCTTT i calJac3.chr5 C 0 C 0 a score=384299.000000 s hg38.chr3_KI270937v1_alt 151280 254 + 165607 AAAAACTTAGTAATGTTTTTCAATAAAATC--ATCACACAGCTGTAGACATGATCTTATTTCTCTCTGCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGTTACTCCCCTCCTTAAAATCTTTTAACACATTCCCATCACCTGAGCATAAATGCCAGCTCCCATCCACAGCCCGAAGTGCCCAGCACGGCCCTGCCCTCTGCCCTGGTC s panTro4.chr3 201691301 254 + 202329955 AAAAACTTAGTAATGTTTTTCAATAAAATC--ATCACACAGCTGTAGACACGATCTTATTTCTCTCTGCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGTTACTCCCCTCCTTAAAATCTTTTAACACATTCCCATCACCTGAGCATAAATGTCAGCTCCCATCCACAGCCCAAAGTGCCCAGCACAGCCCTGCCCTCTGCCCTGGTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472357 254 - 202140232 TAAATCTTAGtaatatttttaaataaaata--atCACACAGCTGTAGTCACGATCTTATTTCTCTCTGCCTTTGCAGAAATCTTATGAAAATTCCAACTATGAATTTGCTTTGTTGAGATTCCCAGAATACACATTCATCCCAACTCTTACTCCCCTCCTTAAAATCTTTTCACATATTCCCATCACCTGAGCATAAATGCCAGCTCCCATCCACAGCCTGAAGTGCCCAGcatggccctgccctctgccctggtc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2913191 254 - 123690457 AAAAACTTAGTAGTATTTTTACATAAAATC--ATCACACAGCTGTAGACGCGATCTTATTTCTCTCTCCCTGTGCAGAAGTCTTATGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAACTGCTATTCCCCTCCTTAAAATCTTTTAACATATTCCCATCACCTGAGCATAAATGCCAGCTCCCATCCACAGCCCAAAGTGCCCGGCACGGCCCTGCCCTCTGCCCTGGTC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174398315 253 - 174439528 aaaaacttagaaatattttt-aatataatc--aacACACAGCCGTAGACGCGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTCCTCTCCTTAAAATCTTTTAACATGTTCCCATCACCCGAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGGATGGCCCTGCCCTCTGCCATGGTC i papAnu2.chr6 I 328 C 0 s chlSab2.chr4 1460626 253 + 91010382 AAAAACTTAGAAATATTTTT-AATATAATC--AACACACAGCCGTAGACGCGATCTTATTTCTCTCTGCCTGTACAGAAGTCTTGTGAAAATTCAAACTATGAATTTACTTTGTTGAGATTCCCAGAATACACATTAATCCCAAATGTTACTCCCCTCCTTAAAATCTTTTAACATGTTCCTATCACTCGAGCATAAATGCCAGCTCCCATTCACAGCCCAAGGTGTCCAGGATGGCCCTGCCCTCTGCCCTGGTC i chlSab2.chr4 C 0 I 2373 s calJac3.chr5 117217099 208 - 159171411 AAAAACTTAGCAATATTTTT-AATATAATCTTATCTCACAGCTGTAGAAATGATCTTATTTCTCTGTGCCTGTGCAGAAGTCTTAGGAACATCCAAACTATGAATTCACTTTGTTGGCATTCCCGGAATACATATTATCCCCAAatgttactgccctccttaaaagcttctaacatgtccccctcaccggagcataaatgccagctccc----------------------------------------------- i calJac3.chr5 C 0 C 0 a score=34880.000000 s hg38.chr3_KI270937v1_alt 151534 27 + 165607 TAtggtctcccctcttaaatgccagca s panTro4.chr3 201691555 27 + 202329955 TAtggtctcccctcttaaatgccagca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472611 27 - 202140232 tatggtctcccctcttaaatgccagca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2913445 27 - 123690457 TATGGTCTCCCCTCTGAAATGCCAGCA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174398568 27 - 174439528 TGTGGACTCCCCTCTTACATGCCAGCA i papAnu2.chr6 C 0 I 130 s chlSab2.chr4 1463252 27 + 91010382 TATGGTCTCCCCTCTtaaatgccagca i chlSab2.chr4 I 2373 I 1 e calJac3.chr5 117217307 0 - 159171411 C a score=76271.000000 s hg38.chr3_KI270937v1_alt 151561 53 + 165607 ccatccacagcccacagtgcccagcacggccctgccctctgccctgccctctg s panTro4.chr3 201691582 53 + 202329955 ccatccacagcccacagtgcccagcacggccctgccctctgccctgccctctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472638 53 - 202140232 ccatccatagcccacagtgcccagcacagccctgccctctgccctgccctcag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2913472 44 - 123690457 CCATCCACAgcccacagtgcccagcacagccctgccctctgctc--------- i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174398725 53 - 174439528 CCATCCACagcccacagtgcccagcacgGCCCTGCCCTCTACCCTGGCCTATG i papAnu2.chr6 I 130 I 122 s chlSab2.chr4 1463280 46 + 91010382 ccatccagagcccacagtgcccggcacggccctgccgtctactctg------- i chlSab2.chr4 I 1 C 0 s calJac3.chr5 117217307 44 - 159171411 --atccacagcccacagtgcccagcatggccctgccctctgccctg------- i calJac3.chr5 C 0 C 0 a score=1299.000000 s hg38.chr3_KI270937v1_alt 151614 5 + 165607 ctgtg s panTro4.chr3 201691635 5 + 202329955 ctgtg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472691 5 - 202140232 ctctg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2913516 2 - 123690457 ---tg i nomLeu3.chr11 C 0 C 0 e calJac3.chr5 117217351 0 - 159171411 C e chlSab2.chr4 1463326 0 + 91010382 C e papAnu2.chr6 174398778 122 - 174439528 I a score=1770553.000000 s hg38.chr3_KI270937v1_alt 151619 1112 + 165607 gcctaaggtctctccccggtgccgttcccttcctgacggacaggcctctgtccgttcctcaaaccacacaggctcaggcctcactccaggcctttg-cgcttctgtgccctctgcctagggtgcctttcccGGGCTCTGcatcctcctctcaacccactgagctccagcctgctggtcgcccctcaggtggatgaatacacggtgtcctctcaccccaccagcttttgcacaggctcttctctgtgccagacaaacacc--------ctatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctGCCCACCCCCCTCACTTGGACTTAACCTTGGTTAGGTTGCCAACCCCCGTCTCCTGACTCCGGGAAGCTAGATGCTCTCCTAGCACTCGGAACTTGCCCATTGCCACA-TTTGCACACCCGTGGTTACTGGGttaggttggcgcacaagtcatcgcgggttttgccattactattaatgAACGGCAGCAACGGCTCCtccccgtttc-ttttgttttttttttcgccattacttttaatg---------------actgctgcaccaacctattagaatcatttatatttatccatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggccaaatctactcaaatcactccaccttcccagcacATTGTTTGTCAATAATCATTTACCAACTGACTGATAGAGAAATGCCTTCCCTGTTGCTGGGATGAGGC-----ACATGACACGCCCCTTTGAAAGTCAATTCCATGGACAGTTAGCATTTGCTCTTCACTCCTGCACCCGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGCCTTGACTCCAGGCTAAGGATGGGAACCATGACTGCTCCACACGCCTCTCATCCCACAGCCAGAGCCGCCGTTCCCTGGGGCACGTGCATCTCATGGGGAAAATCAAGAGCCTT-agacggcaggcctggcagtgcccacacattccaggcttctgcttgtgccgtgtctgtgaaaatctcgttggcagaagcaagtcacccagccaCGAGCAACACCTATGGGACGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAA s panTro4.chr3 201691640 1111 + 202329955 gcctaaggtctctcccctgtgccgttcccttcctgacggacaggcctctgtccgttcctcaaaccacac-ggctcaggcctcactccaggcctttg-cccttctgtgccctctgcctagggtgcctttcccgggctctgcatcctcctctcaacccgctgagctccagcctgctggtcgcccctcaggtggatgaacacacggtgtcctctcaccccaccagcttttgcacaggctcttctctgtgccagacaaacacc--------ctatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctgcccaaccccctccctTGGACTTAACCTTGGTTAGGTTGCCAACCCCCGTCTCCTGACTCCGGGAAGCTAGATGCTCTCCTAGCACTCGGAACTTGCCCATCGCCACA-TTTGCACACCCCTGGTTACTGGGttaggttggcgcacaagtcatcgcgggttttgccattactattcatgaactgcaGCAACGGCTCCtccccgtttc-tttcttttttttttttgccattacttttaatg---------------actgctgcaccaacctattagaatcatttatatttatccatccatcatctgccttcccctctagaaaggaagctccatgagaatagaggccaaatctactcaaatcactccaccttcccagcacATTGTTTGTCAATAATCATTTACCAACTGACTGATAGAGAAATGCCTTCCCTGTTGCTGGGATGAGGC-----ACATGACACGCCCCTTTGAAAGTCAATTCCATGGACAGTTAGCATTTGCTCTTCACTCCTGCACCCGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGCTTTGACTCCAGGCTGAGGATGGGAACCATGCCTGTTCCACACACCTCTCATCCCACAGCCAGAGCCGCCGTTCCCTGGGGCACGTGCATCTCATGGGGAAAATCAAGAGCCTT-agagggcaggcctggcagtgcccacacattccaggcttctgcttgtgccgtgtctgtgaaaatctcgttggcagaagcaagtcacccagccaCGAGCAACACCTATGGGATGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2472696 1117 - 202140232 gcctaaggtctctcccctgtgccgttcccttcctgccggacaggcctctgtctgttcctcaaaacacacaggctcaggcctgactccaggcctttg-ccctgctgtgccctctgcctggggtgcctttcccaggctctgcatcctcctgtcaacccgctgagctccagcctgctggtcgcccctcaggtgGATGAACACACGGTGTCCTCTCGCCCCGCCAGCTTTTGCACAGCCTCTTCTCTGTGACAGACACACACCTTCT----CTATCGGGGTTTGC-TCTCTGAATACCATTCATCCTTGGAGTCTCCACTGAAATATCGCTCCCTGCCCACACCCCTCACTTGGACTTCACCTTGGTTAGGTTGCCAACCCCCGTCTCCTGACTCCGGGAAGCTAGATGCTCTCCTAGCACTCGGAACTCGCCCATCGCCACATTTTGCACAGCCGTGGTTACTGTGttagcttggtgcacaagtcatcgcggtttttgccattactattaatgAACTGCAGCATCGGCTCCtccccgtttctttttttttttttttttgccattacttttaatg---------------actgctgcaccaacctattagaatcatttatagttat-tatccatcatctgccctcccctctagaaaggaagcgtcatgagaatagaggcCAAATCTACTCAAATCTCTCCACCTTCCCAGCACATGGTTTGTCAATAATCATTTACCAACTGACTGATAGAGAAATGCCTTCTCTGTTGCTGGCATGAGGC-----ACATGACACGCCCCTTTGAAAGTCAATTCCATAGACAGTTAGCATTTGCTCTTCACTCCTGCACCCGTGGCGTGGCTGCGCTTAGGCTGATCTAGTCTGACCTTGACTCCAGGCTTAGGATGGGAACCATGTCTGCTCCACACGCCTCTCATCATGCAGCCAGAGCCGCCATTCCCTGGGGCATGCACATCTCATGGGGAAAATCAAGAGCCTC-AGAGGGTAGGCCTGGCAGTGCCCACACATTCCAGGCTTCTGCTTGTGCCATGTCTGTGAAAACCTCGTTGGCAGAAGAAAGTCACCCAACCACGAGCATCACCTATGGGATGGATAAGTCCATCCACCCTCCCTCGGGTCCTGGCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2913518 1116 - 123690457 gcctcaggtctctcccctgtgccgttcccttcctgccagacaggcctctgtccgttcctcaaaccacacaggctcgggcccgactccaggcctttg-ccctgctgtgccctctgcctagggtgcctttcccgggctctgcatcctcctctcaacccgctgagctccagcctgctggtcgcccctcaggtggaggaacacacggtgtcctctcgccccgccggcttttgcacaggctcttctctgtgccagacacacaccctct----ctatcggggtttca-tctctaaataccattcatccttggagtctccactgaaatatcgctccctGCCCACCCTCCTCACTTGGACTTAACCTTGGTTAGGTTGCCAACCCCCGTGTCCTGACGCCGGGAAGCTAGATGCTCTCCTAGCACTCGGAACTTCCCAATTGCCACATTTTGCACACCCGTGGTTACTGTGttaggttggggcacaagtcatcgcggtttttgccattactattaatgaactgcaGCAGCGGCTCCTCCCCATTTC--TTCTTTTCTTTTTTTGCCATTCCTTTTAATG---------------ACTGCTGCACCAACCTATTAGCATCATTTATATTTACCCATCCATCATCTGCCTGCCCCTCTAGAAAGGAAGCCCCATGAGAATAGAGGCCAAATCTACTCAAATCAGTCCACCTTCCCAGCACATTGTTTGTCAATAATCATTTACCAACTGACTGATAGGGAAATGCCTTCACTGTTGCTGGGATGAGGC-----ACATGACACGCCCCTTTGAAAGTCAATTCCATGGACAGTTAGCATTTGCTCTTCACTCCTGCACCCGTGGCGTGGCTGGGCTTAGGCTCATCTAGTCTGGGCTTGACTGCAGGCTAAGGATGGGAACCATGCCTGCTCCACACGCCTCTCATCCCGCAGCCAGAGCCGCCGTTCCCTGGGGCACGCGCATCTCGTGGGGAAAATCAAGAGCCTC-agagggcaggcctggcagtgcccacacattccaggcttctgcttgtgccgtgtctgtgaaaatctcactggcagaagcaagtcacccagccaCGAGCAACACCTATGGGATGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCAA i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174398900 1113 - 174439528 GCCTAAGGTCTCTTCTCTCTGTCATTCCCTTCCTCCCGGACAGGCCTCTGCCAGTTCCCCAAACCACAGAGGCTCAGGCCTGACTCTGGACCTTTC-CcctgctgtgccctctgcctggggTGCCTTTCCCGGGCTCCGCATCCTCCTCTTAACTCACTCAGCTCCAGCATGCTGGTCGCCCCTCAGGTGGATGAACACACAGTGTCCTCTCACACCAAGAGCCTTCGCACAGGCTCTTCTCTGTGCCAGACACACTCCCCCTCTCACTACCGGGGTTTAC-TCTCTAAATACCATTCATCCTTGGAGTCTCCACTGAAATATCGCTCCCTGCCCA-CCCCCTCACTGGGACTTAACCTTGGTTAGGTTGCCAA--CCCATCTCCAGACTCCAGGAAGCCAGATGCCATCCTAGCACTTGGAACTCCCCCATTGCCACATTTTGCACACCCGTGATTACTGtgttaggttggtgcagaagTCATCGAGATTTTTGCCATTACTATTAACGAACTGCAGCACCAGCtccttcccac-tt------tttttttttttgccattacttttaatg---------------actgCTGCCCCAACCTATTAGAATCACttatatttattcatccatcatctGCCTTCCCCTCTAGAAAGGAAGCTCCGTGAGAAGAGAGGCAGAATCTACTCAAATCACTCTAGCTTCCCAGCACACTGCTTGTCAATCATCATTTCCCGACTGACTGACAGAGAAATGCCGCCACCGTTGCTGGGATGAGGC-----ACACGACACGCCCCTGTGAAAGCCACTGTCATGGACAGTTAGCGTTTGCTCTTCACTCCTGCACCTGTGGCGTGGCTGGGCTTAGGCTGATCTAGTCTGGGCTTGACTCCAGGCTGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCGCTGTTCCCCGGGGCACGCGCATCTCATGGGGAAAATCAAGAGCCTTAAGAGGGCAGGCCTGGCAGTGCCCGCACATTCCAGGCTTCTGCTTGTGCCGTGTCTGTGCAAATCTCGTTGGCAGAAGCAAGTCACCCAGCCACGAGCAACACCTGTGGGATGGATAAGTCCATCCACCCTCCCTCGGGCCCTGGCTA i papAnu2.chr6 I 122 I 1005 s chlSab2.chr4 1463326 1113 + 91010382 gcctaaggtctctcccctctgccattcccttcctcctggacaggcctctgccagttccccaaaccacagaggctcaggcctgactccggacctttc-ccctgctgtgccctctgcctggggtgcctttccccagctccacatcctcctcttaactcactcagctccagcctgctggttgcccctcaggtggatgaacacatggtgtcctcccgccccaccggccttggcataggctcttctccgtgccagacacactccccctctcactatcggggtttac-tctctaaataccattcatccttggagtctccactgaaatatcgctccctgCCCA-CCCCCGCACTGGGACTTAACCTTGGTTAGGTTGCCAA--CCCATCTCCTGACACCAGGAAGCCAGATGCCATCCTAGCACTTGGAACTCCCCCATTGCCACATTTTGCACACCCGTGATTACTGTGttaggttggtgcagaagtcatcacggtttttgccattactattaacgAACTGCAGCACCAGctccttcccacttt------tttttttttttgccattacttttaatg---------------actgctgccccaacctattagaatcatttatatttattcatccatcatctgccttcccctctagaaaggaagctccatgagaacagaggccaaatctactcaaatcactccagcttcccagcacactgcttgtcaataatcatttactgactgactgaTAGAGAAATGCCGTCACCGTTGCTGGGATAAGGC-----ACCTGACATGCCCCTTTGAAAGCCACTGTCATGGACAGTTAGCATTTGCTCTTCACTCCTGCACCCGTGGTGTGGCTGGGCTTAGGCTGATCTAGTCTGGGCTTGACTCCAGGCTGAGCGTGGGAACCATGTGTGCTCCACACGCCTCTCATCCTGCAGCCAGAGCCGCTGTTCCCTGGGGCACGCGCATCTCATGGGGAAAATCAAGAGCCTT-agagggcaggcctggcagtgcccgcacattcaaggcttctgcttgtgccgtgtctgtgcaaatctcgttggcagaagcaagtcacccagccaCAAGCAACACCTGTGGGATGGATAAGTCCGTTCACCCTCCCTCGGGCCCTGGCTA i chlSab2.chr4 C 0 I 6 s calJac3.chr5 117217351 1107 - 159171411 gcctaatgg-tctcccctctgctgttactttcctgtcggacaggcctctgtcggttcctcaaaccacacaggttcaggcctgactccaggcttttgtccctgctatg-cctctgcctgggttgcctttccccggctcc-cgtcctcctctcaacgtgctcagctccagcctgctggttgccccgaaggttgatagatacacaatgtcctcc--tcccataggcctttgcacacactcttctctttgcctgaaatgcttccccctttcacatctgggtttacttttctaattaccagtcatccttggagtctccactgaaatatcgctccctGCCCGCCCCCATCACTTGGACTTAACCTTGGCTAGGTTGCCAAACCCTGTCTCCTGACTCCAGGAAGCTAGATGCCATCCCAGCACTTGGAACTTGCCCATTGCAACGTTTTGCACGCTCGTAATTATTCTAttaggttggtgcggaagttaccgcagtttttgctgttacttttaatgAACTGCAGCACCAGCTCCTACCCGCTTT------------ttattgccattacttttaacggcaaaaaccagaattactgctgcaccaacctaaTAGAATCAtttatatttattcatccatcatctgtcttcccctctagaaagcaagctccacgagtatagggaccaaatcGACTCAAATCGCTCCACCTTCCTAGCACATTATTTGTGGGTAATTATTTACCGACTGACTGATAGAGAAACACCTTCATTGTTGCTGGGAGGAAGCCCGTGACAGGACACTCCCCTTTGAAAGTCAGTGTCATGGGCCGTTAGCATTTGCTTTTCACTCCTGCACCCGGGGCTTGGCTGGGCTGAGGCTGATCTAGTCTGGACTTGACTCCAGGCTGAGGGT-GGAACCATGCGTGCTCCACATGCCTCTCAACCTGCAGTTGGAGCCGACGTTCCCTGGGGCACACTCATCTCATGGGAAAAATCAAGAGCATT-AGAGGGCAGGCCTGGCAGTGCCAACACATTTCAGGCTTCTGCTTGTGCAGTGTCTATTAAAA-------------------TCACCCAGGCACAAGCAGCACCTATGGGATGGATAAGTCTCTCCAGCCTCCCTCAGGCCCTGGCAA i calJac3.chr5 C 0 C 0 a score=2171733.000000 s hg38.chr3_KI270937v1_alt 152731 1435 + 165607 GGTTGTG-GCTATGTCATACTCTTACGGGGGGAGTGAAAAATTGAGGCCCAACATTAAATCACCCAC-GCGAGAAATGTCAGCCTC--TGTCCCCACGCTGGAATCATTTTTCACCAGCGGGTTTGCCTGAA-----TTCCCTTTGCAATGG-TGTCTGCAGGTTTAGCCCAATGCTGGTCCCCGTGGAGGACACAGAAGCCTCAATGGGCCTCCGTCTGTTGGGAAGAACAAGATATTAGCTTGGCGCAAAACCACCGCAAGCCCCAGGAGGCCCTTGTGCCATGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAAGCTCACATCCCCAGCCCCTCCCGTGCATCCCCAGCCCCTCCGCTGTGACCCCAGCA---------------CCAGccctct-cccctgcttg-ccccatctctgctt----------tctttttttcatttt-ctttctttccttgtttt--tgagacagggtttggct--ctgtcactcaggctggagtgcaatggcacgatctcagcttactgcaaccttcacctcctgggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcacgccaccatatccagctaa-------------------------tttttttttttttattttggtagagaca-ggatttgccatg--ttgcccaggctggtctcaaattcctgagctcaagtaatcctcccacctcagcctcgcaaagtgctgggattacaggcatgagccaccgagtccaacctactttatttttctctacagtacttggaaccttctaatgtactaaggacacgtgtattttctttcttttttgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatttatcaccctctcccc-agttcctggaacagggtctggcacatgaatggtgtgttctaaataaatatttttaatagataaataaatGAAATATCCTACAAGAGAAAGCTA-TATCTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCTGCCTCTGAAcacacccaaccccggaggagccagcagagg-------aaaaagaggaaca---------aaggcggggaagggagcaggtggtgcccaccaag-caaggaaccctgaggcttaggccgaacctgagctggagaagggactcatctaggaactgggtatgagattaaagtttagattggtctggcctggattttgtaacacctaaaCAAGAGTTAttctattc--tttttttgttttttttttttgagatggagtctca--ctgtcccccaggctggactgtagtggcgctatctcagctcactgcaacctctgcctcccaggttcaagtgattctcatgcctcagcctcccgagtagctgggattacaggcgcacaccaccattcccggctaa-ttttgtatttttagtagagatagagtttcaccatgttggcc s panTro4.chr3 201692751 1440 + 202329955 GGTTGTG-GCTATGTCATACTCTTACGGGGGGAATGAAAAATTGAGGCCCAACATTAAATCACCCAC-GCAAGAAATGTCAGCCTC--TGTCCCCAAGCTGGAATCATTCTTCACCAGCGGGTTTGCCTGAA-----TTCCCTTTGCAATGG-TGTCTGCAGGTTTAGCCCAATGCCGGTCCCCGTGGAGGACAGAGAAGCCTCAATGGGCCTCCGTCTGTTGGAAAGAACAAGATATTAGCTTGGCGCAAAACCACCGCAAGACCCAGGGGGCCCTTGTGCCATGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAAGCTCACATCCCCAGCCCCTCCCGTGCATCCCCAGCCCCTCTGCTGTGACCCCAGCA---------------CCAGccctctccccctgcttg-ccccatctctgctt----------tctttttttcatttt-cttcctttccttttttt--tgagacagagtctggct--ctgtcactcaggctggagtgcaatggcacgatctcagcttactgcaaccttcacctcctgggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcatgccaccatacccagctaa------------------------ttttttttttttttttttttgtagagaca-ggatttgccatg--ttgcccaggctggtctcaaattcctgagctcaagtaatcctcccacctcagcctcccaaagtgctgggattataggcgtgagccactgagtccagcctactttatttttctctgcagtacttggaatcttctaatgtactaaggacacgtgtattttctttcttttttgtcttccctagaacaggagcttaatgtgggcaggtatttttgttgatctcatttatcaccctatcccc-agtgcctggaacagggtctggcacatgaatggtgtgttctaaataaatatttttaacagataaataaatGAAATATCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCTCTGCCTCTGAACACACCCAACCCCGGAGGGGCCAGCAGAGG-------AAAAAGAGGAACA---------AAGGTGGGGAAGGGAGCAGGTGGTGCCCACCAAG-TAAGGAACCCTGAGGCTTAGGCCGAACCTGAGCTGCAGAAGGGACTAATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGAGTTAttctattcttttttttttttttttttttttgagaaggagtctca--ctgtcccccaggctggagtgcagtggcgctatctcagctcactgcaacctctgcctcccaggttcaagtgattctcatgcctcagcctcccgagtagctgggattacaggcgcacatcaccattcccagctaa-ttttgtatttttagtagagatagggtttcaccatgttggcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2473813 1422 - 202140232 GGTTGTG-GCTATGTCATACTCTTACGGCGGGAGTGAAAAATTGAGGCCCAACATTAAATCACCCAC-GCAAGAAATGTCAGCCTC--TGTCCCCACGCTGGAATCATTCTTCACCAGCGGGTTTGCCTGAA-----TTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAGTGCTGTTCCCCGTGGAGGACAGAGAAGCCTCCATGGGCCTCCGTCTGTTGGGAAAAACAAGATATTAGGTTGGTGCAAAACCACCGCAAGCCCCAGGGGGCCCTTGCACCATGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAAGCTTGCATCCCCAGCCCCTCCCGTGCATCCCCAGCCCCTCCCCTGTGACCCCAGCA---------------CCAGccctct-ctcctgcttg-ccccatctctgctt----------tctttttttcatgtt-----ctttcgttttttt--tgagacagggtctggct--ctgtcaccctggctggagtgcaatggcacgatctcggcttactgcaaccttcaccacctgggctgaagcaattctccctcctcagcctccccagtggctgggactataggtgcatgccaccatacccagctaa---------------------------ttttttttttttttttggtagagaca-ggatttgccatg--ttgcccaggctggtctcatatttctgagctcaagtaatcctcccacctcagccttccaaagtgctgggattacaggcgtgagccaccgagtccaacctactttatttttctctacagtacttggaaccttctaatgtactaaggacacgtgtattttctttcttttttgtcttcgctaaaacaggagcttaatgtggacaggtatttttgttgatctcatttatcaccctatcccc-agtgcctggaacagggtctggcacatgaatggtgtgttctaaataaatatttttaatagataaataaatGAAATATCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATCAACAGAACCTAACAGCCAAAGACCTTTAGCCTGTCTCCGCCTCTGAACACACCCAACCCCGGAGGAGCCAGCAGAGG-------AAAAACAGGAACA---------AAGGTGGGGAAGTGAGCGGGTGGTGCCCACCAAG-TAAGGAACCCTGAGGCTTAGGCCGAACCTGAGCTGGAGAAGGGACTAATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACAGCTAAACAAGACtta----------ttctttttttttttttttttgagatggagtctca--ctgacccccaggctggagtgcagtggcgctatctcagctcactgcaacctctgccttccaggttgaagtgattctcatgcctcagcctcccaagtagctgggattacaggcacacaccaccattcccggttaa-ttttgtatttttagtagagatagggtttcaccatgttggcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2914634 1402 - 123690457 GGTTGTG-GCTATGTCATACTCTTACGGGGGGAGTGAAAAATTGAGGCCCAACATTAAATCACCCATGGCAAGAAATGTCAGCCTC--CGTCAGCACACTGGAATCATTCTTCATCAGCGGGTTTGCCTGAC-----TTCTCTTTGCAATGC-TGTCTGCAGGTTTAGGCCAATGCTATTCCTCATGGAGGACAGAGAAGCCTCAATGGGCCTCCGTCTGTTGGGAAGAACAAGATATTAGCTTGGTGTAAAACCACCGCAAGCCCCAGGTGGCCCTTGCCCTGTGAGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAAGCTTGCATCCCCAGCCCCTCCC--------------------CTGTGACCCCAGCA---------------CCAGCCCTCT-CCTCTGctt--ccccatctctgctttgttttttcatctttctttccttttggtttttttttttttttt--tgagacagggtctggct--ctgtcacccaggctggagtgcaatggcacgatctcggcttactgcaaccttcacctccagggctgaagcaattctccctcctcagcctccccagtggctgggactacaggtgcatgccaccatacccagctaattttttttttttttttttttttttttttttttttttttttttttgtagagaca-------------------------------caaattcctgagctcaagtaatcctcccacctcagcctcccaaagtgctgggattacaggtgtgagccaccgagtccaacctactttatttttctctacactacttgcaaacttctaatgtactaaggacacgtgtattttctttctttttggtcttccctagaacaggagattaatgtgggcaggtatttttgttgatctcatttatcaccctagcccc-agtgcctggaacagggtctggcacatgaatggtgtgttct-----aatattttt----gaggaataaatgaaATACCCTACAAGAGAAAGCTAGTATCTGGAACTCACCCATcaacagaacctaaaagccaaagacctttagcctgtttccgccactgaacacacccaaccccggaggagccagcagagg-------aaaaagaggaaca---------aaggtggggaagggagcaggtggtgcccaccaag-tgaggaaccctgaggcttaggccgaacctgagctggagaagggactaatctaggaactgggtgtgagattaaagtttagatttgtctggcctggattttgtaacacctaaaCAAAAGTTA---------------TTCTATAttttttttgagatggaacctca--ctgtcccccaggcaggagtgcagtggcgctatctcagctcactgcaacctctgcctcccgggatcaagtgattctcatgcctcagcctcccgagtagctgggattacaggcgcacaccaccattcctggctaa-ttttgtatttttagtagagatagagtttcaccctgttggcc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174401018 1441 - 174439528 AGCTGCGAGCTGTGTCATACTCTTACAG-GAGAGTGAAAAATTGAGGCCCAACATTAAATCACCCATGGCAAGAAATGTcggcctctgtgtccccacattGGAATCATTCTTCACCAGCGGGTTCGCCTGAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAATCTTGTTACCCGTGGAGGAGAGAGAAGCCTCAGTGGGCCTCTGTCTGTTGGGAAGAACAAGATATTAGCTTGGCACAAAACCATCACAAGCCCCAGGGGGCCCACGCCTTGTGTGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGAAAGCTTGCGtccccagcctctcccccgtgttcccaacccctcccctgcatccccagcaccctcccctgcgtccccagccctct-cccctgcttg-ccccatctctgctt----------tctttttttcatttt-----ctttatttttttt--tgagacagggtctggct--ttgtcacccaggctggagtgcaatggcacgatctcggcttactgcaaccttcacctccagggctgaagcaattctccctcctcagcctccccagtggctgggact-------------accccacccagctaa----------------------------ttttttttttcttttggtaaagaCA-Agatttgccatg--ttacccaggctggtctcaaattcctgagctcaagtaatcctcccacct--gtctcccaaagtgccgggattacaggcatgagccgccgagtccagcctgctttatttttctttacagtaCTTGGAACCTTCTAACGTACTAAGGacacatgtattttctctctttttcgtCTTCCCTAGAACGGGAGCTTAACGTGGGCAGGTGTTTCTGTTGATCTCATTTATTACCctatcccc-agtgcctggaacagtgtctggcacatgaaTGGTGtgttccaaataaatatttttaatagataactAAATGAAATATCCTACAAGAGAAAGCTAGTATTCGGAACTCACCCATCAACAGAACCTAAAAGCCAAAGACCTTTAGCCTGTCGCCGCCTCTGAACACACCCAACCCAGGAGGAGCCAGCAGAGG-------AAAAACAGGAACAAAggtggggaaggtggggaagGGAGCAGGTGGCGCCCACCAAG-TAAGGACCCCTGAGGCTTAGGCCAAACCTGAGCTGGAGAAGAGACTAATCTAGGAACTGGGTGTGAGATT-AAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACAAGGGTTAttccatta--tcatttttttttt----tttgagatggagtctca--ctgtccccaaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccgggtccaactgattctcatgcctcagcctcccgggtagctgggattacaggcgcacaccaccattcccgactaa-ttttgtatttttagtagagatgaggtttcactacattggcc i papAnu2.chr6 I 1005 C 0 s chlSab2.chr4 1464445 1445 + 91010382 AGCTGTGAGCTGTGTCATACTCTTACAG-GAGAGTGAAAAATTGAGGGCCAACATTAAATCACCCATGGCAAGAAATGTCGGCCTCTGTGTCCCCACATTGGAATCATTCTTCACCAGCGGGTTCGCCTGAGCTGACTTCCCTTTGCAATGG-TGTCTGCAGGTTTAGGCCAATGCTGTTCCCTGTGGAGGAGAGAGAAGCCTCAGTGGGCCTCTGTCTGTTGGGAAGAACAAGATATTAGCTTGGCGCAAAACCACCACAAGCCCCAGGGGG--CACGCCTTGTGTGACAGGAGAGGGGCAG---AGAACTGTGGGAACTCAGGCAAGCTTGCGTCCCCAGCCTCTCCCCCGTGTTCTCAACCCCTCCCCTGTGTCCCCAGCACCCTCCCCTGTGTCCCCAGccctct-cccctgcttg-ccccatctctgctt----------tctttttttcatttt-----ctttctttttttttctgagacagggtctggct--ctatcacccaggctggagtgcaatggcacgatctcggcttactgcaaccttcacctcccgggctgaagcaattctccctcctcagcctccccagtggctgggactacagatgc-cgccaccacacccagctaa---------------------------tttttttttttcttttggtagagaca-ggatttgccatg--ttacccaggctggtctcaaattcctgagctcaagtaatcctcccacct--gtctcccaaagtgccgggattacaggcatgagccactgagtccagcctgctttatttttctttacagtacttggaaccttctaatgtactaaggacacgtgtattt----tattttttgtcttccctagaacaggagcttaacgtgggcaggtatttttgttgatctcatctatcaccctatccctaagcacctggaacagtgtctggcacatgaatggtgtgttctaaataaatattttaaatagataaCTAAATGAAATATCCTACAAGAGAAAGCTAGTATTTGGAACTCACCCATcaacagaacctaaaagccaaagacctttagcctgtctccgcctctgaacacacccaacccgggaggagccagcagaag-------aaaaacaggaaca---------aaggtggggaagggagcaggtggcgcccaccaag-taaggacccctgaggcttaggccaaacctgagctggagaaaggactaatctaggaactgggtgtgagatt-aagtttagatttgtctggcctggattttgtaacacctaaaCAAGGGTTATTCCATTA--TCAtttctttttttttgtttgagatggagtctca--ctgtccccaaggctggagtgcagtggcgtgatctcagctcactgcaacctctgcctcccgggtccaactgattctcatgcctcagcctcccgagtggct-ggattacaggtgcacaccaccattcccagctaa-ttttgtatttttagtagagatggggtttcaccatgttggcc i chlSab2.chr4 I 6 C 0 s calJac3.chr5 117218458 1360 - 159171411 GGATGTG-GATGTGTCATACTCTTACAAGAGGAGTGAAATATTGAGGCCCATCATTAAATCACCTACAGCAAGAAATGTCAGCCTCTGTGTCCCCACTCTGGGATCATTCTTCATCAGCAGGTTTACTGGAGCTGACTGCCCTTTGCAATGGTTGTCCGCAGGATTAGGCCAGTGCTGTTCCCCGTGGAGGACAAAGAAGCCTCAGTTGGCCTCCAACTGTTGGGAAGAAAAGGATATTAGATTGGCGTAAAACAACCACAAGCCCCAGGGGACCTGTGCCCCATGAGACAGGAGAGGGGCAGAGAAGAACCATGGGAGCTCAGGGACGCTTGcatccccagcc-------------------------------------------------------cca-----ct-tccccacttacccccatctctgctt----------------------ttt-----ttttttttttttt--ccagacagggtctgtctggctgtcacccaggctggagtgcaatggtacaatcttggcttactgccatctccgcctcccaggctcaagcaatcctcccacctaagcctccccagtggctgggaccacaggtgcatgcccccacacccaactaa-----------------------------------tttttttttgtagagacctggttttgtcgtgaccaaaccaggctggtctcgaa--------------------------------ctctcaaagtgctgggattacagatgtgagtcactgagtctggcctgctttatttttctttacagtacttggaaccttctaatgtactaagtacacatgtattttc--tcttttttgtcttccctagaataggagctttacatgagcaggtatttttgtttatctcatttatcaccctatcccc-agtgcctagaacagtggctggcatgtgaatgatgtgttctaagtaaatatttttaacaaataaataaatGAAATATCCTACAAGAGAAAGCTAGTATTGGGAGCTCACCCATCAACAGAACCAAAAAGCCAGAGACCTTTAGCCTGTCCCTACCTCTGAACGCAGCCAACCCCAGAGGAGCCAGCAGAGGAAAAAAAAAAAACAGGAACA---------AAGGTGGGGAAGGGAACAGGTGGTGCCCGCCCAGCTAAGGACCCCCAAGGCTTAGGCTGAACTGGAGCTGGAGAAGAGACTCATCTAGGAACTGGGTGTGAGATTAAAGTTTAGATTTGTCTGGCCTGGATTTTGTAACACCTAAACATCAGTTATTCCAttta-tttttgtttttgttttttttgagacagagtcttggtctgtggcccaggctggagtacaatggcacaatctcagctcactgcaacctccacctttcaggttcaggtaattctcctgcctcagcctcctgagtagct-aggttataggcgcttgtcaccatgcccagctcatttttgtattttcattagagacggggtttcaccatgttggtc i calJac3.chr5 C 0 n 0 a score=1950.000000 s hg38.chr3_KI270937v1_alt 154166 3 + 165607 CCC- s panTro4.chr3 201694191 4 + 202329955 CCCt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2475235 4 - 202140232 TCCt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916036 4 - 123690457 CCTt i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174402459 4 - 174439528 ccct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1465890 4 + 91010382 CCCt i chlSab2.chr4 C 0 C 0 e calJac3.chr5 117219818 0 - 159171411 I a score=227646.000000 s hg38.chr3_KI270937v1_alt 154169 148 + 165607 ggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctattaaaaatacaaaaaattagctgggcgtggtggcaggtgcctgta s panTro4.chr3 201694195 148 + 202329955 ggctcacgcctgtaatcccagcacgtggggaggccgaggtgggtggatcaccaggtcaggagattgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatataaaaaattagctgggcgtggtggcaggtgcctgta i panTro4.chr3 C 0 M 247 s ponAbe2.chr3 2475239 148 - 202140232 ggctcatgcctctaatcccagcactttgggaggccgaggtgggcggatcacgatgtcaggactttgagaccatcctggcaaacacggtgaaaccctgtctctactaaaaatacaaaaaattagctgggcatggtggcaggtgtctgtc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916040 148 - 123690457 ggctcacacctgtaatcccagcactttgggaggctgacacgggcagatcatgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctccactaaaaatacaaaaaatttgctgtgcatggtggcaggtgcctgta i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174402463 148 - 174439528 ggctcacgcctgtaatcccagcactttgggagaccgaggcaggcagacaatgaggtcaggagatcgagaccatcctagctaacacagtgaaaccccatctctactaaaaatacaaaaatttagccgggcatagtggcaggcgcctgtg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1465894 148 + 91010382 ggctcacgcctgtaatcctatcactttgggaggctgaagtgcgcagatcacaaggtcaggagattgagaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggcgggcacctgta i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129692 147 + 204313951 ggctcacacctgtaatcccagcactttgggacgccgaggcggatggatcacgaggtcaggagttcaagacaagcctgatcaacatggtgaaatcccagctctactaaaaatacaaaaa-ttgggcgggcatagtggcggacgcctata i calJac3.chr2 T 47777 C 0 a score=74140.000000 s hg38.chr3_KI270937v1_alt 154317 68 + 165607 gtcccagctactcaggaggctgaggcaggagaattgcttgaactccagatgcagaggttgcagtgagc s ponAbe2.chr3 2475387 68 - 202140232 gtcccagctactctggaggctgaggcaggagaatcgcttgaactccagatgcagaggttgcagtgagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916188 68 - 123690457 gtcccagctactcaggaggctgaggcaggagaatcgcttgaactccagatgcagaggttgcagtgagc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174402611 68 - 174439528 atcccagctactcaggaggctgaggcaggagaatcgcttgaaccccggacacggaggttgcagtgagc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1466042 68 + 91010382 gtcccagctactcagggggctgaggcaggagaatggcttgaaccccggacgtggaggttgcagtgagc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129839 59 + 204313951 atcccaacaactc---------aggcaggagaatcacgtgaaccagggagacagaggttgcagtgagc i calJac3.chr2 C 0 C 0 e panTro4.chr3 201694343 247 + 202329955 M a score=56489.000000 s hg38.chr3_KI270937v1_alt 154385 44 + 165607 caagatcaatgccactgcactccagcctgggtgacagggcaagc s panTro4.chr3 201694590 44 + 202329955 CAAGATCAATAAcattgcactccagcctgggtgacagggcaagc i panTro4.chr3 M 247 C 0 s ponAbe2.chr3 2475455 44 - 202140232 caagatcaatgccactgcactccagcctgggtgacagagtgagc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916256 44 - 123690457 caagatcaatgccattgcactccagcctcggtgacagagagagc i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174402679 42 - 174439528 caagatc-gcaccactgca-tccagcctgggcgagacagcaagc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1466110 43 + 91010382 caagatc-gcgccactgcactccagcctgggcgacaaagcgagc i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204129898 43 + 204313951 tgagatc-acaccattgcactccagcctggacaacagagtgaga i calJac3.chr2 C 0 C 0 a score=577559.000000 s hg38.chr3_KI270937v1_alt 154429 284 + 165607 cttcatctcaaaaacaaacaaacaaacaaacaaaaaaCCTTCAAACGAATGTAAGAATTATTATTTTTTAAAGTACAACTTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGGAAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT------------AAAA---AAAACCCAAACACCCGAAAAGGGATCAATCTCAAGAT-AGTTTGTAACATTTTATTGCAAAAAGAAGGGCAGAGAACAG---TC-TTCTTCATACCTGTTCACC s panTro4.chr3 201694634 280 + 202329955 cttcatctcaaaaacaaacaaacaaacaaA----AAACCTTCAAACGAATGTAAGAATTATTATTTTTTAAAGTACAACTTTAAAAATGCCCCTTACAAATACAACAGT------GTTATATTAAGGGAAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT------------AAAA---AAAACCCAAACACCCGAAAAGGGATCAATCTCAAGAT-AGTTTGTAATATTTTATTGCAAAAAGAAGGGCAGAGAACAG---TC-TTCTTCATACCTGTTCACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2475499 279 - 202140232 ctccatttcaaaaacaaacaaacaaa--------aaaCCTTCAAACAAATGTAAGAATTATTATTTTTTAAAGTACAGCTTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGCAAACCCGCTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAATATGTGAATGTT------------AAAA---AAAATCCAAACACCCAAAAAGGGATCAAACTCAAGAT-ACTTTGTAACATTTTATTGCAAAAAGAAGGACAGAGAACAGCCTTC-TTCTTCATACCTGTTCACC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916300 284 - 123690457 ctccatctcaaaaacaaacaaacaaacaaa----caaCCTTCAAACGAATGTAAGA---ATTATTTTTTAAAGTACAGCTTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGCAAACCCACTTCAGAAGCAC-----------AAAGTTAATTTCTTATAATTCCAAGAAACATGTGAATGTTT--------AAAAAAA---AAAACCCAAACACCCGAAAAGGGATCAAACTCAAGAT-AGTTTGTAACATTTTACTGCAAAAAGAAGGGCAGAGAACAGCCTTC-TTCTTCATACCTGTTCACC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1616570 284 + 181584905 CTCCGTCTCAAAAACAAACAAA-AA---------AAACCTTCAAAAGAATGTAAG----ATTATTTTTTAAAGTACAGCTTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGCAAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTCCAAGAAATATGTGAATGTTTaaaaaaaaaaaaaaa---aaaaCCCAAACACCCG-AAAGGGATCGAACTCAAGAT-AGTTTGTAACATTTTATTGCAAAAAGAAGGGCAGAGAACAGTTTTC-TTCTTCATACCTGTTTACC i macFas5.chr6 N 0 I 16 s papAnu2.chr6 174402721 282 - 174439528 ctccgtctcaaaaacaaacaaa-aa---------aaaccttcaagagaatgtaagaattattattttttaaagtacagctTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGCAAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTACAAGAAATAtgtgaatgttt------aaaaaaaaa---aatacccaaacacCCG-AAAGGGATCGAACTCAAGAT-AGTTTGTAACATTTTATTGCAAAAAGAAGAGCAGAGAACAGTTTTC-TTCTTCATACCTGTTTACC i papAnu2.chr6 C 0 I 16 s chlSab2.chr4 1466153 284 + 91010382 ctccgtctcaaaaacaaacaaacaa---------aaaCCTTCAAAAGAATGTAAGAATTATTATTTTTTAAAGTACAGCTTTAAAAATGCCCCTTACAAATACATCAGT------GTTATATTAAGGCAAACCTACTTCAGAAGCAC-----------AAAGTTAATTTCTTATGATTCCAAGAAATATGTGAATGTTT-----AAAAAAAAAA---AAAACCCAAACACCTGAAAAGGGATCGAACTCAAGAT-AGTTTGTAACATTTTATTGCAAAAAGAAGGGCAGAGAACAGTTTTC-TTCTTCATACCTG-TTACC i chlSab2.chr4 C 0 I 6291 s calJac3.chr2 204129941 299 + 204313951 ctctgtctcaaaaaaaaaaaa-------------agaaCTTCAAAAGAATGTAAGA---ATTATTTTTAAAAGTACAGTTTCAAAAATGCCCCTTAAAAATATATCAATGTTGTAGTTATATTAAGGCAAACCTTCTTCAGAAGCACAGACTTGAAAAAAAGTTAATTTCTTATAATTCCAAGAAATATGTAAATGTT------AAAAAAAAAACACAAAACCCAAACATCCAAAAAGGGATCAAACTCAAGATAAGTCTGTAACATGTTATCGTAAAAAGAAGTGCAGAGAACAGTCTTCTTTCTTCATACCTGTTAACC i calJac3.chr2 C 0 C 0 a score=1692506.000000 s hg38.chr3_KI270937v1_alt 154713 804 + 165607 ----------------GTAATAATTTTTAGCAGCTCTCCTGTGC-AAAGAAGTCTCATCAATCAATCAGCATACGGGCCACAAATACCTTCTCAGTGCGGTTTCACCTAC------------------------------------------------------AATACAAGCACTCAGAAGCACAAATTTAACTGAAGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATTAATTTCTTGAAATAGCCTAATAATTTAGTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAATTTCAATCATATTAGTATAGGAATTCATATTAGTATAGGCTAATAATTCATATTAGTAgaggcgggaggatcgcttgagcctaggagtttgagaccagcctgggcaagacagtgagactccatctctaaTTTTTTTTTT-AAATAAAGAAACTCAGAGAGGAGAAGGAAGCGGATTGATATGTGTCTATCCAAGCACAAATTTTGTGTGCCTGTACATACAACACGACTATGAAccttccttcacgcagctcacaatctagtagcgagagaaaagtacgaaaacaTGAGCCCCCACGATGAGGAAAAAGGCGCATATCAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCGCATCCA------Ctttctttgt-ttttttgagatggggtttcgctctgtctcccaggctggagtgccgtgg-------cttgatctcagctcaatgcagcctcaacctcccaggctcaagtgatcttcccatctcagcctcccaagtagctggaactacaggcgtgcaccactacac------------gtttactttttgt s panTro4.chr3 201694914 805 + 202329955 ----------------GCAGTAATTTTTAGCAGCTCTCCTGTGC-AAAGAAGTCTCATCAATCAATCAGCATACGGGCCACAAATACCTTCTCAGTGCGGTTTCACCTAG------------------------------------------------------AATGCAAGCACTCAGAAGCACAAATTTAACTGAAGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATTAATTTCTTGAAATAGCCTAATAATTTAGTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAATTTCAATCATATTAGTATAGGAATTCATATTAGTATAGGCTAATAATTCATATTAGTAgaggcgggaggatcgcttgagcctaggagtttgagaccagcctgggcaagacagtgagactccatctctaaTTTTTTTTTTTAAATAAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTGTCTATCCAAGGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAACCTTCCTTCACGCAGCTCACAATCTAGTAGTGAGAGGAAAGTACGAAAACATGAGCCCCCACGATGAGGAAAAAGGCGCACATCAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCGCATCCA------Ctttctttgt-ttttttgagatggggtttcgctctgtctcccaggctggagtgccgtgg-------cttgatctcagctcaatgcagcctcaacctcccaggctgaagtgatcttcccatctcagcctcccaagtagctggaactacaggcgtgcaccactatac------------gtttagtttttgt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2475778 801 - 202140232 ----------------GCAGTAATTTTTAGCAGCTCTCCTGTGC-AAAGAAGTCTAATCAATGAATCAGCATACCAGCCACAAATACCATCTCAGTGCGGTTTCACCTAG------------------------------------------------------AATACAAGCACTCACAACCACAAATTTAACTGAAGTGACAAACCAGGCCATTTTGTAGCTTCAGGTTTTCTACCAGTAATAT----ATTAATTTCTTGAAATAGCCTAATAATTTAGTTCTACTATCAAAACAGAAG-CCAA-TCTGGGAGAAC----ATTATAGAAGTCAAACTAATTTGAATCATATTAGTATAGGAATTCATATTAGTATAGGCCAATAATTCATATTAgcagaggggggaggatcgcttgaggctaggagtttgagaccagcctgggcaagacagtgagactccatctctaaTTTTTTTTTT-AAATAAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTGTCTATCCAAGGACAAATTTTGTGTGCCTGTACAGACAACACAACTATGAACCTTCCTTCATGCAGCTCATAATCTAGCAGCAAGAGGAAACTATGAAAACATGAGCCCCCACGGCGAGGAAAAAGGCACACATCAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCACATCCA------Ctttctttgt-ttttttgagacggggtttcgctctgtctcccaggctggagtgcagtgg-------cttgatctcagctcaatgcagcctcaatctctcaggctcaagtgatcttcccatctcagcctcccaagtagctgggactacaggcgtgcaccaccacac----------ttgtttagtttctgt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2916584 803 - 123690457 ----------------ACAGTAATTTTTAGCAGCTCTCCTGTGC-AAAGAAGTCTAATCAATGAATCAGCGAACGGGCCACAAATACCTTCTCAGTGCGGTTTCACCTAG------------------------------------------------------AATACAAGCACTCAGAAGCACAAATTTAACTGAAGTGAGAAACCCGGCCATTTTGTAGCTTCAGTTTTTCTACCAATAATAC----ATTAATTTCTTGAAATAGCCTAATAATTTAGTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAACAATTATTATACAAGTCAAACTAATTTCAATCACATTAGTATAGGAATTCA-AATAGTACAGGCTAATAATTCATATTAGTAgaggcgggaggatcgcttgggcctaggagtttgagaccagcctgggcaagacaatgagactccatctct--TTTTTTTTTT-AAATAAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTGTCTATCCAAGGACAAATTTTGTGTGTCTGTACATACAACACAATTATGAACCTTCCTCCACACAGCTCACAATCTAGTAGCGAGAGGGAACTACGAAAACATGAGCCCCCACGGTGAGGAAAAAGGCGCACATCAGAGAAAAGAAAAATGCTGCGATGATCCAATGGCAGGAGCAGCGCACATCCA------Ctttctttgt-ttttttgagatggggtttcgttctgtctcccaggctagagtgcagtgg-------cttgatctcagctcaatgcagcctcaacctcccaggctcaagtgatcttcccatctcagcctcccaagtagctgggactgcaggcgtgcaccactacac----------ttgtttcgtttttgt i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1616870 799 + 181584905 ----------------GCAGTAATTTTTAGCAACTCTCCTGTGC-AAACAAGTCTCATCAAGGAATCAGTGTACGGGCCACAAATACCTTCTCAGTGCAGTTTCACCTAC------------------------------------------------------AATACAAACACTCAGAAGCACAAATTTAACTGAGGTGAGAAACCAGGCCATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATTAATTTCTTGAAATAGCCTAACAATTTACTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAAAAATTTTTATAGAAGTCACACTAATTTCAATCACATTAGTAGAGGAATTCATATTAGTAT------a-----------ggctgaggcgggacgatcacttgagcctaggagtttgagaccagcctgggaaagacagtgagactccatctctaaTTATTTTTTC-ATATAAAGAAATTCAGAGAGGAGAAGGAAGTGGATTGATATGTGTCTGTCCAAAGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAAccttccttcacgcagctcacaatccagtagtgagagggaactatgaaaacaTGAGACCCCACGATGAGGAAAAAGGTGCGCATCAGAGAAAAGAAAAATGCTGCGATGACCCAATGGCAGGAGCAGCACGCATCCA------Ctttctttgt-ttttttgagatagggtttcgctctgtctcccaggctggagtgctgtgg-------cttgatctcagctcaatgcagcctcaacctcccaggctcaagtgatcttcccatctcagcctcccaagtagctgggactacaggcgtgcaccaccacactgggttcattttgttgactttttgt i macFas5.chr6 I 16 I 293 s papAnu2.chr6 174403019 806 - 174439528 ----------------GCAGTAATTTTTAGCAGCTCTCCTGTGCAAAACAAGTCTCATCAAGGAATCAGTGTACGGGCCACAAATACCTTCTCAGTGCAGTTTCACCTAC------------------------------------------------------AATACAAACACTCAGAAGCACAAATTTAACTGAGGTGAGAAACCAGGCTATTTTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATTAATTTCTTGAAATAGCCTAATAATTTACTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAACAATTATTATAGAAGTCACACTAACTTCAATCACATTAGTATAGGAATTCATATTAGTAtaggctga-----------ggctgaggcgggacgaTCGcgtgagcctaggagtttgagaccagcctgggaaagacagtgagactccatctctaattattttttt-atataaagaaattcagagaggagaaggaagcgGATTGATATGTGTCTGTCCAAAGACAAATTTTGTGTGCCTGTACATACAACACAACTATGAACCTTCCTTCACGCAGCTCACAATCTAGTAGTGAGAGGGAACTACGAAAACATGAGACCCCACGATGAGGCAAAAGGTGcgcatcagagaaaaaaaaaatgctgcgaTGACCCAATGGCAGGAGCAGCACGCAtcca------ctttctttgt-ttttttgagataaggtttcgctctgtctcccaggctggagtgctgtgg-------cttgatctcagctcaatgcagcctcaacctcccgggctcaagtgatcttcccatctcagcctcccaagtagctgggactacaggcgtgcaccaccacactgggttcattttgttgactttttgt i papAnu2.chr6 I 16 C 0 s chlSab2.chr4 1472728 804 + 91010382 ----------------GCAGTAATTTTTAGCAGCTCTCCTGTGC-AAACAAGTCTCATCAAGGAATAAGTGTACGGGCCCCAAATACCTTCTCAGTGCAGTTTCACCTAC------------------------------------------------------AATACAAACACTCAGAAGCACAAATTTAACTGAAGTGAGAAACCCGGCCATTCTGTAGCTTCAGTTTTTCTACCAGTAATAT----ATTAATTTCGTGAAATAGCCTAATAATTTACTTCTACTATCAAAACAGAAGCCCAA-TCTGGGAGAACAATTTTTATAGAAGTCACACTAATTTCAATCACATTAGTAGAGGAATTCATATTAGTATAGGCTga-----------ggctgaggcgggacgatcgcttgagcctaggagtttgagaccagcctgggaaagacagtgagactccatctctaaTT-TTTTTTT-ATATAAAGAAATTCAGAGAGGAGAAGGAAGCGGATTGATATGTGTCTGTCCAAAGACAAATTGTGTGTGCCTGTACATACAACACAACTATGAACCTTCCTTCACGCAGCTCACAATCCAGTAGTGAGAGGGAACTACGAAAACATGAGACCCCACGATGAGGAAAAAGGTGCGCATCAGAGAAAAGAAAAATGCTGCGATGACCCAGTGGCAGGGGCAGCACACATCCA------Ctttctttgt-ttttttgagatagggttttgctctgtctcccaggctggagtgcagtgg-------cttgatctcagctcaatgcagcctcaacctcccaggctcaagtgatcttcccatctcagcctcccaggaagctgggactacaggcgtgcaccaccacactgggttccttttgttggctttttgt i chlSab2.chr4 I 6291 C 0 s calJac3.chr2 204130240 852 + 204313951 GTAGACCTCCCTGAGAGCAGTAATTTTTAGCAGCTCTCCTGTGC-AAACAAGTCTTGTGAAGGAACCAGTGTATAAGCCACAAATACCTTCTCAGTGCGGCTTCACCTAGATTTTTTTTTACCTTCAGTCTAAGGTTCAATTCAGGTATATTCACCTAGATTTTAACACGAGCACTCAGAAGCACAAATTTACCTGAAATGAGAAACCAGGCCATTTTGCAGCTTCAGTTTTTCTGCTGGTATTATATTAATTAATTTCTTGATATAGCCTAATGATTTAGTTCTACTATC-AAACAGAAGCCCAATTCTGGGAGAACAATTATTATAGAAGTCAAACTAATTTCAATCATATTCACATAGGAATTCATATATGTATACACTga-----------ggctgaggcgggaggatcgcttgagcctaggagtttgggaccagcccgggcaaggcagtgagattccatctctaa---atttttt-aaataaagaaaTTCAGA---GAGAAGGAAGCGAACTGGTATGTCTGTATCCAAGGCCAAAT--TGTGTGCCTGTATGTACAACAC-ACTACGACCCTTCCCTCACCCAGCTCACAATCTAGCATCGAGAGG-AACTACGAAG-----------------------------GCACGTCGGAGACAAGAACAACGCT--GATGATCCCACGGCAGGAGCAGCATGTGTTCATGAAGCCTGTCACTGTACACCCtgagccatggtttcgctctgtctcccaggctggagtacggcgggggctcagctgatctcagctcagcgcagcctccacctcccaggctcaagtgatcttcctatctcagcctcctgagtagctaggactataggcatgtaccaccacacttggctaatattgtttactttttgt i calJac3.chr2 C 0 C 0 a score=1764555.000000 s hg38.chr3_KI270937v1_alt 155517 818 + 165607 agaaacagggtctcacaatgttgccaaggctggCATCCTGAAGGGCGGGTGGGGCTTCATCCTACAGAGATGAAAGGCAGAAGAAGCTCAGAGCCCAAAGCAAAGGGGTGGAGGACAAGGGCATCTTCAGAACAGAGTGGCTCAGCTGAGACATCCAGTAGGATGCCACCAGGCAGAGGTGTGGTGGAAAAACACAGGGCCACAGGGTGAATGCTCACATGTGAGGAGCAAACCACCACAGAACACAACAGAAACACGGTGTACTAAATCAGGCTTCAAATCGCAGCCCTGCAACTTCAGAGCTACCACAGGTAACCCAGAAAGGGAGCACGGACAGCACC---GCCCACTGCCTGAGGCTATGAGATGGACCAGAAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAAATGTGAATCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGACTATGTCATAAAGTTTACCTCT---ACTCTAAACTCTCATTACTggtgagccaccaatctgactttaagttttctagcagctaaattgaagaggaaaatgtaatcaggtaaa-ggtttataagatgcaaacaaaacagGACAGCCACCACAGTTTCTGAGAAGACG-CGCAGCTCCAGCTCCA-GGAGAAACAGGGTGGCCATCTCCTGGGGCTGCCCCGCAGCAGGTGTGTCAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACGGTGACTATGGGCTTCATGGGGCCACACACCTCCAGTACAAGCTGAGGAAATCTCCCAGGG s panTro4.chr3 201695719 816 + 202329955 agaaacagggtctcacaacgttgccaaggctggCATTCTGAAGGGTGGGTGGGGCTTCACCCTACAGAGATGAAAGGCAGAAGAAGCTCAGAGCCCAAAGCAAAGGGGTGGAGGACAAGGGCATCTTCAGAACAGAGTGGCTCAGCTGAGACATCCAGTAGGATGCCACCAGGCAGAGGTGTGGTGGAAAAACACAGGGCCAC--GGTGAATGCTCACATGTGAGGAGCAAACCACCACAGAACACAACAGAAACACGGTGTACTAAATCAGGCTTCAAATCACAGCCCCGCAACTTCAGAGCTACCGCAGGTAACCCAGAAAGGGAGCACGGACAGCACC---ACCCACTGCCTGAGGCTATAAGATGGACCAGAAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAAATGTGAACCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGACTATGTCATAAAGTTTACCTCT---ACTCTAAACTCTCATTACTGgcgagccaccaatctgactttaagttttctagcagctaaattgaagaggcaaatgtaatcaggtaaa-GATTTACAAGATGCAAACAAAACAGGACAGCCACCACAGTTGCTGAGAACACG-CGCAGCTCCAGCTCCA-GGAGAAACAGGGTGGCCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACGGTGACTATGGGCTTCATGGGGCCACACACCTCCAGTACAAGCTGAGGAAATCTCCCAGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2476579 818 - 202140232 agcaacagggtctcacaatgttgccaaggctggCATCCTGAAGGGTGGGTGCGGCTTCATCCTACAGAGATGAAAGGCAGAAGAAGCTCAGAGCCCAAAGCAAAGGGGTGGAGGACAAGGGCATCTTCAGAACAGAGTGGCTCGGCTGAGACATCCAGTAGGATGCCACCAGACAGAGGTGTGGTGCAAAAACACAGGGCCACAGGGTGAATGCTCACATGTGAGGAGCAAGCCACCACAGAACATGACAGAAACACGGTGTACTAAATCAGGCTTCAAATCACAGCCCTGCAACTTCGGAGCTACCACAGGTAACCCAGAAAGGGAGCACGGACAGCACC---GCCCACTGCCTGAGGCTATGAGATAGACCAGAAACCTGTGCAtactaacaacctgccttatcccagaaggaattcaggaaacac-aaagacactcacagtacagcaaaataaagtaaatgtgaatcatgatggctgaggagaaagtgaaga-gtctaagactatgtcatagagtttacctct---actctaaactctcattactggtgagccaccaatctgactttaagttttctagcagctaaattgaagaggaaaatgtaatcaggtaAA-GGTTTATAAGATGCAAACAAAACAGAACAGCCACCACAGTTGCTGAGAACACG-CACAGCTCCAGCTCCA-GGAGAACCAGGGTGGCCATCTCCTGGGGCTGCCCCACAGCAGGCGTGTGAGCCCCAAAGCCAGCATCTCTCAGGGTGAACGGTGACTATGGGCTTCATGGGGCCACATGCCTCCAGCACAAGCTGAGGAAATCTCCCAGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2917387 809 - 123690457 agaaacaggctctcacaatgttgccaaggctggCATCCTGAAGGGCAGGTGGGGCTTCATCCTACAGAGATGAAAGGCAGAAGACGCTCAGAGCCCAAAGCAAAGGGGTGGAGGACAAGGGCGTCTTCAGAACAGAGTGGCTCGGCTGAGACATCCAGTAGGAGGCCACCAGGCAGAGGTGCGGTGGAGAA--ACAGGGCCACGGGGTGAATGCTCACACGTGAGGAGCAAACCACCACCGAACACGACAGAAACACCGTGTATTAAATCAGGCTTCAAATCGCAGCCCCGCAACTTGAGAGCTACCACAGGTAACCCAGAAAGGGAGCA--GATGGCACC---GCCCACTGCCTGAGGCTACGAGATGGACCAGAAACCTGTGCTTACTAACAACCTGCCTTATTCCAGAAGGAATTCAGGAAACAC-AAAGACACTCACAGTACAGCAAAATAAAGTAACTGTGAGTCATGTTGGCTGAGGAGAAAGTGAAGA-GTCTAAGACTatgtcataaagtttac--------ctctaaactctcattactggcgagccaccaacctgactttaaattttctagcagctaaattgaagaggaaaatgtaatcgggtaaatggtttataagatgtaaataaaacagaaaagccaccacggttgctgagaagacg-cgcagctCCAGCTCCA-GGAGAAACAGGGTGGCCATCTCCTGGGGCTG-CCCACAGCAGGCATGTGAGCCCCAAAGCCAGCGTCTCTCAGGGTGAACCGTGACTACGGGCTTCATGGGGCCACATGCCTCCAGCACAAGCTGAGGAAATCTCCCAGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1617962 812 + 181584905 agaaacagggtctcacgatgttgccaaggctggCATCCTGAAGGGTGGGTGGGGCTTCATCCTACAGAGATGAAAGGCAGAAGCAGCTCAGAGCCCAGAGCAAAGGGGTTGGGGACAAGGGCATC--CAGAACAGAGTGGCTCGGCTGAGACATCCAGTAGGATGCCACCAGGCAGAGGTGTGGTGGAAAAACACAGGGCCACAGGGTGAATGCTCACACGTGAGGAGCAAACCACCACAGAACACGACAGAAACACGGTGCACTACATCAGGCTTCAAATCGCAGCCCTGCAACTTGAGAGCTACCACAGGCAA-CCGGAAAGGGAGCACGGACAGCACC---GCCCACTGCCTGAGGCTGTGAGAC-GACCAGAAACCTGTGCTCACTAATGACCCGCCTTATTCCAGAAGGAACTCAGGAAACAC-AAAGA----CACAGTACAGCAAAATAAAGTAAATGTTAACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGA--CTGTCATAAAGTTTACCTCT---ACTCTAAACTCTCATTACTGGCGAGCCACCAACCAGACTTTAAATTTTCCAGCAGCTAAATTGAAGAGGAAAATGTAATCAGGTAAATGGTTTATAAGACGCAAACAGAACAGAACAGCCACCACAGCTGCTGAGCACACATTGCAGCTCCAGCTCCAGGGAGGAACAGGGCGGCCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCCCTCGGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATGCCCCCAGCACAAGCTGAGGAAATGTCCCAGGG i macFas5.chr6 I 293 C 0 s papAnu2.chr6 174403825 814 - 174439528 agaaacagggtctcacgatgttgccaAGGCTGGCATCCCGAAGGGCGGGTGGGGCTTCATCCTACAGAGATGAAAGGCAGAAGCAGCTCAGAGCCCAGAGCAAAGGGGTTGGGGACAAGGTCATC--CAGAACAGAGTGGCTCGGCTGAGACATCCAGTAGGATGCCACCAGGCAGACGTGCGGTGGAAAAACACAGGGCCACAGGGTGAACGCTCACATGTGAGGAGCAAACCACCACAGAGCACGACAGAAACACGGTGCACTACATCAGGCTTCAAATCACAGCCCTGCAACTTGAGAGCTACCACAGGCAA-CCGGAAAGGGAGCACGGACAGCACC---GCCCACTGCCTGAGGCTGTGAGAC-GACCAGAAACCTGTGCTTACTAATGACCTGCCTTATTCCAGAAGGAACTCAGGAAACAC-AAAGA----CACAGTACagcaaaataaagtaaatgttaaCCACGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGACTCTGTCATAAAGTTTACCTCT---ACTGTAAACTCTCATTACTGGCGAGCCACCAACCGGACTTTAAATTTTCTAGCAGCTAAATTGAAGAGGAAAATGTAATCAGGTAAATGGTTTATAAGATGCAAACAGAACAGAACAGCCACCACAGCTGCTAAGCACACATTGCAGCTCCAGCTCCAGGGAGGAACAGGGCGGCCATCTCCTGGGGCTGCCCCGCAGCAGGCGTGTGAGCCCCAAAGCCAGCGTCCCTCAGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATGCCCCCAGCACAAGCTGAGGAAATCTCCCAGGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1473532 814 + 91010382 agaaacagggtctcacgatgtggccaaggctggCATCCTGAAGGGCGGGTGCGGCTTCATCCTACAGAGATGAAAGGCAGAAGCAGCTCAGAGCCCAGAGCAAAGGGGTTGGGGACAAGGGCATC--CAGAACAGAGTGGCTCGGCTGAGACATCCAGTAGGATGCCACCAGGCAGGGGTGTGGTGGAAAAACACAGGGCCACAGGGTGACTGCTCACACGTGAGGAGCAAACCACCACAGAACACGACAGAAACACGGTGCACTGAATCAGGCTTCAAATCGCAGCCCTGCAACTTGAGAGCTACCACCGGCAA-CCAGAAAGGGAGCACGGACAGCACC---GCCCACTGCCTGAGGCTGTGAGAC-GACCAGAAACCTGTGCTTACTAATGACCTGCCTTATTCCAGAGAGAACTCAGGAAACAC-AAAGA----CACAGTACAGCAAAATACAGTAAATGTTAACCATGTTGGCTGAGGAGAAAGTGAAGAGGTCTAAGACTCTGTCACAAAGTTTACCTCT---ACTCTAAACTCTCATTACTGGCGCGCCACCAACCGCACTTTAAATTTTCTAGCAGCTAAATTGAAGAGGAAACTGTAATCAGGTAAATGGCTTATAAGATGCAAACAGAACAGAACAGCCACCACAGCTGCTGAGCACACAGTGCAGCTCCAGCTTCAGGGAGGAACAGGGCGGCCATCTCCTGGGGCTGCCCCGCAGCAGGCATGTGAGCCCCAAAGCCAGCGTCCCTCAGGGTGGACAGTGACTACGGGCTTCATGGGGCCACATGCCCCCAGCACAAGCTGAGGAAATCTCCCAGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204131092 797 + 204313951 agaaacaaggtcttacaatgttgccaaggctggCATCCTGAAGGGCGGGTGGGGCTTCATCCTACAAAGATGAAAGGCAGTGGAAGCTAAGAGCTCAAAGCAAAGGGGTGGGGGACAACGGAATCTGAGGAACAAAATGTCTGGGCTGAGACATCCAGTAGGATGCCAACAGGCAGAGGTATGGTGGGAAAACACAGGGCCACAGGGTGTATGCTCACATGTGAGAA-------ACCATAGCACATGAGAGAAAC---------TAAATCAGGCTTCAGATCTCAGCCC-GCAGCTGGAGAGCTACCACAGGCAACACCGAAGGGGAGCATGGACAGCACCACAGCCCACTGCCCGAGGCTGTGAGAAGGACCAGAAACCTGTACTCACTAGCAGCTGGCCTCATTTCAGAAGGAATTCAGGAAACATGAAAGACTTTCACAGTGCAGCAAAATGAAGCACCTCTTAATTGCGTTCCCTAAGGGGAACGTGAAGC-GT-TAAGACCATGTCACA-AGTTTACCTCGAAAACTCTGAACTCTCATTACTGGTGAGCCACATATCTGACGTTAAATGTTTTAGCAGCGAAATTGAAGATGAAAATGTAATCAG------GGTTTATAAGATGCA-----AACAGAACAGCTACCACAGCTGCTGAGAACTCA-CGCAGCTCCAGCTCCAGGGAGAAACAGGGCGGCCATCTCCTGGGGCTGCGCGACAGCAGGCGCGTGAGCCACAAAGCCAGCATCTCTCAGGGTCCACAGTGACTACAGGCTTCATGGGGCCACATGCCCCCAGCACAAGCTGAGGAAACCTCCCAAGG i calJac3.chr2 C 0 T 885 a score=78778.000000 s hg38.chr3_KI270937v1_alt 156335 41 + 165607 CAATTCAaggaacagggtctcacaatgttgtccaggctggt s panTro4.chr3 201696535 41 + 202329955 CAATTCAaggaacagggtctcacaatgttgtccaggctggt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2477397 41 - 202140232 CAATTCAaggaacagggtctcacaatgttgcccaggctggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2918196 41 - 123690457 CAATTCAaggaacagggtctcacaatgttgcccaggctggt i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1618774 41 + 181584905 CAATTCAaggaacagggcctcacaatgttgcccaggctggt i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174404639 41 - 174439528 CAATTCAAGGAACAGGgcctcacaatgttgcccaggctggt i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1474346 41 + 91010382 CAATTCAaggaatagggcctcacaatgttgcccaggctggt i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204131889 885 + 204313951 T a score=356127.000000 s hg38.chr3_KI270937v1_alt 156376 173 + 165607 ctcaaa--------------cgatccccctgcctcggcctcccaaagtgttgggaggtcagacgtgagccactgcatctggcc----CCGCATGCACTTTATAGAGG-AGGGCTTT------------------GCATCCTGAAGGGCGAGTGGGGCTTCATCCTGCAGAGATGAAAGGCAGAGGAAGCTCAGAG-CCCAAGGTAAAGGGG s panTro4.chr3 201696576 173 + 202329955 ctcaaa--------------cgatccccctgcctcggcctcccaaagtgttgggaggtcagacgtgagccactgcatctggcc----CCGCACGCACTTTATAGAGG-AGGGCTTT------------------GCATCCTGTACGGCGGGTGGGGCTTCATCCTGCAGAGATGAAAAGCAGAGGAAGCTCAGAG-CCCAAGGTAAAGGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2477438 188 - 202140232 ctcaaactcctgggctcaagcaatccccctgcctcggcctcccaaagtgttgggaggtcagatgtgagccactgcatctggcC----CTGCACGCACTTTATAGAGG-AGGGCTTT------------------GCATCCTGAAGGGCAGGTGGGGCTTCATCCTGCAGAGATGAAAGGCAGAGGAAGCTCACAGCCCCAAGGTAAAGTGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2918237 188 - 123690457 ctcaaactcctgggctcaagcgatacccctgcctcggcctcccaaagtgttgggaggtcagacgtgagccactgcacctggcc---ACTGCACGCATTTTATAGAGG-GGGGCTTT------------------GCATCCTGAAGGGCAGGTGGGGCTTCATTCTGCAGAGATGAAAGGCAGAGGAAGCTCAGAG-CCCAAGGCAAAAGGG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1618815 186 + 181584905 ctcaaactcctgtgctcaagcgatccccctgcctcggcctcccaaagtgttgggaggtcaggcgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGCTTT------------------GCATCCTGAAGGGCAAGT-GGGCTTCATCCTACAGAGATGAAAGGCAGAGGAAGCTCAGAG-CCCAAGGTAAAGGGG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174404680 186 - 174439528 ctcaaactcctgtgctcaagcgatccccctgccttggcctcccaaagtgttgggaggtcaggcgtgagccactgcacctggcc----cggcAGGCACTTTAGAGAAG-AGGGCTTT------------------GCATCCTGAAGggcaagt-gggcttcatcctacAGAGATGAAAGGCAGAGGAAGCTCAGAG-CCCAAGGTAAAGGGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1474387 186 + 91010382 ctcaaactcctgtgctcaagcgatccccctgccttggcctcccaaagtgttgggaggtcaggcgtgagccactgcacctggcc----CGGCAGGCACTTTAGAGAAG-AGGGTTTT------------------GCATCCTGAAGGGCAAGT-GGGCTTCATCCTACAGAGATGAAAGGCAGAGGAAGCTCAGAG-CCCAAGGTAAAGGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204131004 196 + 204313951 --------------ctcaagtgatcttcctatctcagcctcctgagtagctaggactataggcatgtaccaccacacttggctaatattgtttactttttgtagaaacaaggtcttacaatgttgccaaggctggCATCCTGAAGGGCGGGTGGGGCTTCATCCTACAAAGATGAAAGGCAGTGGAAGCTAAGAG-CTCAAAGCAAAGGGG i calJac3.chr2 T 885 I 1023 a score=1330017.000000 s hg38.chr3_KI270937v1_alt 156549 766 + 165607 GGCGCCTAACaaaagcgactccattgggaccacggtgagagggtccccatacacagcttgggttaagccagacactgatttcaaagtatctcaggaatggtggactcagcacctgtcaggcaattctctctctcaagcaggctcctggtagatatttagtagcagctgaaatcaagattatgttctgactgacacttgctgagggttaaagagctatatacgctttgaggaccagctgaactggggcaggactaacaccctctggtgaaaatacgggaacccaaacacacgagtcagagcaggaggtgtctccccc--acctccaaacAATAACGCTGACCTTGGATTTGGGTTAAGTGCCTAGCCCAGGGGTGTGAGTGTTCAGGAAGTGGAAACCATCATCACCATCATCAGGTAATGGAAAACCATCAAAGCTTTGAGCTGGCTTGTTAGCCAAGAATAGTAGTAGTGTATTAGCTACTACTaatactcacagctgacaattactgagcacttgctccgtgccaggaatcac-ggaggcacctcgcatgcatttcctcaatac-tccctcccagtaacggcgaggACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCAGGCCCCAAGGCACTCCAGTGGAGCCTGCCAAGGAGGGCAGGCTACCATGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGTTGAGCAAATT-AACAGAAAACCTAAAACTAAACTTAAAATCTAAAAATTTGAGCAAATGCAT s panTro4.chr3 201696749 766 + 202329955 GGCGCCTAACaaaagcgactccattgggaccatggtgagagggtcccgatacacagcttgggttaagtcagacactgatttcaaagtatctcaggaatggtggactcagcacctgtcaggcaattctctctctcaagcaggctcctggtagatatttagtagcagctgaaatcaagattacattctgactgacacttgctgatggttaaagagctatatatgctttgaggaccagctgaacttgggcaggactaacaccctctggtgaaaatacgggaacccaaacacacgagtcagagcaggaggtgtctccccc--acccccaaacAATAACGCTGACCTTGGATTTGGGTTAAGTGCCTAGCCCAGCG-TGTGAGTGTTCAGTAAGTGGAAACCATCATCACCATCATCAGGTAATGGAAAACCATCAAAGCTTTGAGCTGGCTTGTTAGCCAAGAATAGTAGTAGTGTATTAGCTACTACTaatactcacagctgacaattactgagcacttgctccgtgccaggaatcac-ggaagcacctcgcatgcatttcctcaatac-tccctcccagtaacggcgaggACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCAGGCCCCAAAGCACTCCAGTGGAGCCTGCCAAGGTGGGCAGGCGACCATGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGTTGAGCAAGTTTAACAGAAATCCTAAAACTAAACTTAAAATCTAAAAATTTGAGCAAATGCAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2477626 767 - 202140232 GGCGCCTAAGAaaagtgactccattgggaccacggtgagagggtcccgatacacagcttgggttaagccagacactgatttcaaagtatctcaggaatggtggactcgtcacctgtcaggcaattctgtctctcaagcaggctcctggtagatatttagtagcagttgaaatcaagattatgttctgactgacacttgctgatggttaaagagctatatatgctttgaggaccagctgaactggggcaggactaacgccctctggtgaaaatacgggaacccaaacaCACAAGTCAGAGCGGGAGGTGTCTCCCCC--ATCCCCAAACAATAACGCTGACCTTGGATTTGGGTTAAGTGCCTAGCCCAGCG-TGTGAGCGTTCAGTAAGTGGAAACCATCATCACCGTCGTCAGGTAATGGAAAACCATCAAAGCTTTGAGCTGGCTTGTTAGCCAACAACAGTAGTAGTGTATCAGCTACTACTaatattcacagctgacaattactgagcacttgctctgtgccaggaatcacgggaaacacctcacatgcatttcctcaatac-tccctcccagtaatggcgaggACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCGGGCCCCAAAGCACTCCAGTGGAGCCTGCCAAGGTGGGCAGGCTATCATGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGTTCAGCAAGTTTAACAGAAAACCTAAAACTAAACCTAAAATCTAAAAATTTCAGCAAATGCAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2918425 767 - 123690457 GgcgcctaagtaaagtgactccattggggccacggtgagagggtccccatacacagcttgggttaagccagacactgatttcaaagtatctcaggaatggtggactcagcacctgtcaggcaattctctctctcaagcaggctcctggtagatatttagtaccagctgaaatcaagatgatgttctgactgacacttgctgatggttcaagagctacatatgctttgaggaccagctgaactggggcaggactaacaccctctggtgaaaatacgggaacccaaacacacaagtcagagcaggaggTGTCTCCCCC-GAACCCCAAACAATAATGCTGACCTTGGATTTGGGTTAAGCGCCTAGCCCAGCGGTGTGAGCGTTCAGTACCTGGAAACCATCATCACCATCATCAGGTAATGG-AAACCATCAAAGCTTTGAGCTGGCTTCTTAGCCAAGAATAATGGTAGTGTATTAGCTACTACTaatactcacagctgacaattactgagcacttgctctgtgccaggaatcacgggaagcacctcgcatgcatttcctcaatac-tccctcccagtaacggcgaggACACAAACCtggtagagccaggactagaatccaggcaggccccaa-gcactccagtgGAGCCTGCCAAGGTGGGCAGGCTATCATGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGTTGAGCAAGTATGACACAAAACCTAAAACTAAACCTAAAATCTAAAAATTTGAGCAAATGCAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1619001 768 + 181584905 GGTGCCTAAGaaaagtgactccattgggaacacagtgaga-ggtcccgatgcacagcttgggttaagccagacactcatttcaaagtatctcaggaatgggggactcagcacctgtcaggcaattctctctctcaagcaggctcctggtagatatttagtagcagctgaaatcaacattatgttctgacagatacttgctgattattaaagagctatatatgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatatgggaacccaaACACACAAGTCAGAGCAGGAGGTGTCTGCCCCCAACCCCCAAACAATAATGCTGACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGAAACCATCATCACCATCATTAGGTGACGGAAAACCATCAAAGCTTTGAGCGGGCTTGTTGGCCAAGAACAGTGGTCGTGTATTAGCCACTACTaataatcgcagctgacagtcactgagcacttgctccatgccagg-atcacgggaagcacctcgcatgcatttcctcaatatcccccccccagtaacagcgaggACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCAGGCCCCAAAGCACTCCAGTGGAGCCTGCCAAGGTGGGCAGGCTTTCACGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGGTGAGCAAGTTTAACAGAAAACCTAAAACTAAACCTAAAATCTAAAAACCTGAGCAAACGCAT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174404866 762 - 174439528 GGTGCCTAAGAAAAGTGACTCCGTTGGGAACACAGTGAGA-GGTCCCGATGCACAGCTTGGGTTAAGCCAGACACTCATTTCAAAGTATCTCAGGAATGGGGGACTCAGCAACTGTCCGGCAATTCTCTCTCTCAAGCAGGCTCCTGGTAGATATTTAGTAGCAGCTGAAACCAACATTATGTTCTGACAGATACTTGCTGATGATTAAAGAGCTATATATGCTTTGAGGACCAGCTGAAGTGGGGCAGGACTAACACCCTCTGGTGAAAATACGGGAACCCAAACACACAAGTCAGAGCAGGAGGTGtctgcccccaacccccaaacAATAATGCCGACCCTGGAT-----TTAAGTGCCTAGCCCAACG-TGTGAGTGTTCAGTAAGTGgaaaccatcatcaccatcattaggTGATGGAAAACCATTAAAGCTCTGAGCGGGCTTGTTGGCCAAGAACAGTGGTCGTGTATTAGCCACTACTAATAACCGCAGCTGACAGTCACTGAGCACTTGCTCCATGCCAGG-ATCACGGGAAGCACCTCGCATGCATTTCCTCAATAT-TCCCTCCCAGTAACGGCGAGGACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCAGGCCCCAAAGCACTCCAGTGGAGCCTGCCAAAGTGGGCAGGCTTTCACACTAATGAGGTCCTGTATTTGACCACCACTCCTAGGTGAGCAAGTTTAACAGaaaacctaaaactaaacctaaaatctaaaaacctaagcaaacgcat i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1474573 763 + 91010382 GGTGCCTAAGAAAAGTGACTCCATTGGGAACACAGTGAGA-GGTCCCCATGCACAGCTtgggttaagccagacactgatttcaaagtatctcaggaatggtggactcagcacccatcaggcaattctctctctcaagcaggctcctggtagatatttagtagcagctgaaaccaacattatgttctgacagatacttgctgatgattaaagagctatatatgctttgaggaccagctgaagtggggcaggactaacaccctctggtgaaaatacgggaacccaaACACACAAGTCAGAGCAGGAGGTGTCTGCCCCCAA-CCCCAAACAATAATGCTGACCCTGGATTTGGGTTAAGTGCCTAGCCCAGCA-TGTGAGTGTTCAGTAAGTGGAAAC---CATCACCATCATTAGGTGACGGAAAACCATCAAAGCTTTGAGCAGGCTTGTTGGCCAAGAACAGTGGTCATGTATTAGCCACTACTaataatcgcagctgacagtcactgagcactcgctccgtgccagg-atcacgggaagcacctcgcatgcatttcctcaatat-tccctcccagtaacagcgaggACACAAAACTGGTAGAGCCAGGACTGGAATCCAGGCAGGCCCCAAAGCACTCCAGTGGAGCCTGCCAAGGTGGGCAGGCTTTCATGCTAATGAGGTCCAGTATTTGACCACCACTCCTAGGTGAGCAAGTTTAACAGAAAACCTACAACTAAACCTAAAAGCTAAAAACCTGAGCAAACGCAT i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204131200 1023 + 204313951 I a score=2126589.000000 s hg38.chr3_KI270937v1_alt 157315 968 + 165607 AAAAAGCA-GCTGTTAAAATGGATCATAAATCTTGCATCACTCGCTGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCCTCTGAGGAGGGCACTCCGTGTGGCTCGTATCACCCTGGTGACAAACCACGTGAACCTGGGTGGTCACCTGACCATATTGAACAGACGATG-----CACAGAGCCATTTGCATCCACTGTGGTCAACATTTAGGAAGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTTTCTAGTCGCCATGTCTTGCACTT--CCCGAGTATAAATAAACTG----AGATGCAAA-TAAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATCAAGAAAGCACAATCACTAGTGTAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCATACGTCACATATTAGGAACTG-----ATAACATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGACTGAATCCAGCA-CCTCCCCCCC----CACCACCCACAG-CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAGCCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGGATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACGCCAAGGACCCAGATTTCCCGCTGCCTGAACGCCCAATATTCGCACACTGATAAGAA s panTro4.chr3 201697515 971 + 202329955 AAAAAGCA-GCTGTTAAAATGGATCATAAATCTTGCATCACTCGCTGGAAAACCACTCAAAATAAACGTCTCTGAGACATGGCCTCTGAGGAGGGCACTCCGTGTGGCTCGTATCACCCTGGTGACAAACCACGTGAACCTGGGTGGTCACCTGACCATATTGAACAGACGATG-----CACAGAGCCATTTGCATCCACTGTGGTCAACATTTAGGAAGTTTTAAGCTGAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTTTCTAGTCGCCATGTCTTGCACTT--CCCGAGTATAAATAAACTG----AGATGCAAA-TAAAAAAAGGAGGATTTAAGAATAATGAAAAGACAAAAACCAAGAAAGCACAATCACTAGTGTAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCATACGTCACATATTAGGAACTG-----ATAACATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGACTGAATCCAGCA-CCCCCCCCCCGCCGCCCAACCCACAG-CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAGCCTTTCAACATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGGATCAATTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACG-CAAGGACCCGGATTTCCCGCTGCCTGAACGCCCAATATTCGCACACTGATAAGAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2478393 965 - 202140232 AAAAAGCAGGCTGTTAAAATCAATCATAAACCTTGCATCGCTCACTGGAAACCCACTCAAAATAAACATCTCTGAGACATGGCCTCTGAGGAGGGCACTCCGTGTGGCTCGTATCACCCTGGTGACAAACCACTTGCACCTGGGTGGTCATCTGACCATATTTAACAGATGATG-----CACGGAGCCATTTGCATCCACTGTGGTCAACATTTAGGAAGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCGGGTTCTCTTGACATCTCTCTCTAGTAGCCGTGTCTTGCACTT--CCCGATCATAAATGAACTG----AGATTCAAA-TAAAAAAAGGAGGATTTAAGAATAATGAAGAGAGAAAAATCAAGAAAGCACAATCACTAGTGTAGAGGTAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATTAGGAACTGATGTCATAATATAAGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATCCAGCA-CC------------CCCCACCCACAG-TGCAGTGAGATAGTGTCTAGCAGCCATAGTGCTCCCCGCACCACA-GTTCAGTCTCTGGCAACATCAGATACTTCCCACTAATAATGAGGAGCCTTTCAATATTTTCACAACATCTCAAAACTGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGCATCAGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCAGCAGTCAGGTGTTCAATGAAGTAAAATGTATCCAATGACAGCTCAGGGGAGGGGGATCAGTTGAGCTGAAACTGGCAAGAACGTAACTCCAGGGAGCTCACAACACG-CCAGGACCCGGATTTCCCGCTGCCTGAACGCCAAGTATTCGCACACTGGTAAGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2919192 961 - 123690457 AAAAAGCAGGCTGTTAAAATAGATCATAAATCTTGCATCACTCACTGGAAAACCACTCAAAATAAATGTCTCTGAGACATGGCCTCTGAGGAGGGCACTCCGTGTGGCTCGTATCACCCTGGTGACAAACCACTTGAACCTGGGTGGTCATCTGACCATATTTAACAGATGATG-----CACAGAGCCATTTGCATCCACTGTGGTCAACATTTAGGAAGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTCTTTCTAGTAGCCACGTCTTGCACTT--CCCGAGTATAAATGAACTG----AGATGCAAA-TAAAAAAAGGAGGATTTAAGAATAATGAGAAAAGAAAAATCAAGAAAGCACAATCACTAGCGTAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTACACAAATGCATGTGAAATAATACACCAGCATCTGTGACCCACACGTCACATATTAGGAACTG-----ATGTCATATGGTAAACATGTTACTCTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATCCAGCA-CC------------CCCCACCCACAG-CGCAGTGAGGCAGTGTCTAGCAGCCGTAGTGCTCCCCGTGCCCCAGGTCCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACAAGGATCCTTTCAACATTTTCACATCATCTCAAAACTGACCCCATTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCAGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCAGCAGTCAGATGTTCAACGAAGTAAAATGTATCCAATGATAGCTCAGGGGAGGGGGATCAATTGAGCTGAAATTGGCAAGAACGTAACTCCAGAGAGCTCACAACACG-CAAGGACCCGGATTTTCCGCTGCCTGAACGCCAGGTATTCGCACACTGATAAGAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1619769 966 + 181584905 AAAAAGCAGGCTGTTAAAATGGATCATAAATCTTGCATCACTCACTGGAAAACCACTCAAAATAAATGTCTCCGCGACATGGCCTCTGGGGAGGGCACTCTGTGTGGCTCGTACCACCCTGGTGACAAACCACTTGAACCTGGGTGGTCATCTGACCACATTTCACAGATGATG-----CACAGAGCCATCTGCACCCACTGTGGTCAACATTTAGGACGTTTTAAGCTAAGATTTGCCAAATTGTAGCCTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGTCTTGCACTT--CCCAAGTATAAAGGAACCG----AGATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATCAAGAAAGCACAATCACTAGAGCAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACGTATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAGGCATCC------------CCCCACGCACAG-CGCAGTGAGGCAGTGTCCAGCAGCCGTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACTAATAACGAGGAGCCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCTAGCTTAAATGGCAC-GGATCTGG-AAAGGCAAACTATACACAGAATCGGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCCGCAGTCAGGTGTTCAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGGATCAATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACC-CAAGGACCCGGATTT-CCGCCGCCTGAACGTCCAGTATTCGCACACTGATAAGAA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174405628 965 - 174439528 aaaaaGCAGGCTGTTAAAGTGGATCATAAATCTTGCATCACTCACTGGAAAACCACTCAAAATAAACGTCTCTGCGACATGGCCTCTGGGGAGGGCACTCTGTGTGGCTCGTACCACCCTGGTGAcaaaccacttgaacctgggtggtcaTCTGAccacatttcacagatgatg-----CACAGAGCCATCTGCATCCACTGTGGTCAACAGTTAGGACGTTTTAAGCTAACATTTGCCAAATTGTAGCCTATTAGATTCCAGGTTCTCTCGACATCTTTTTCCAGTAGCCATGTCTTGCACTT--CCCAAGTATAAAGGAACTg----agatgcaaatttaaaaaaggaggatttaagaataatgaaaagagaaaaatcaagaaagcacAATCACTAGAGCAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAAGGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCGGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCA-CC------------CCCCACGCACAG-CGCAGTGAGGCAGTGTCCAGCAGCCATAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGATACTTCCCACTAATAACGAGGAGCCTTTTAACATTTTCACAACATCTCAAAACTGATCCCTTTTCTAGCTTAAATGGCAC-AGATCTGG-AAAGGGAAACTATACACAGAATCGGAAAAGATGACTGCCCCTGAGGGATTACAGAAAAAGCTGCAGTCAGGTGTTCAATGAAGTAAAATGTGTCCAATGATACCGCAGGGGAGGGGGATCAATTGAGCTGAAACTGGCAAGAA-CTAACTGCAGGGAGCTCACAACACC-CAAGGACCCGGATTTCCCGCCGCCTTAACGCCCAGTATTCGCACACTGATAAGAA i papAnu2.chr6 C 0 M 570 s chlSab2.chr4 1475336 962 + 91010382 AGAAAGCAGGCTGTTAAAATGGATCATGAACCTTGCATCACTCACTGGAAAACCACTCAAAATAAATGTCTCTGCAACATGGCCTCTGGGGAGGGCACTCTGTGAGGCTTGTATCACCCTGGTGACAAACCACTTGAACCTGGGTGGTCGTCTGACCACATTTCACAGATGATG-----CACAGAGCCATCTGCATCCACTGTGGTCAACATTTAGGACGTTTTAAGCTAAGATTTGCCAAATTGTAGCTTACTGGATTCCAGGTTCTCTTGACATCTTTTTCCAGTAGCCATGCCTTGCATTT--CCCAAGTATAAAGGAACTG----AGATGCAAATTTAAAAAAGGAGGATTTAAGAATAATGAAAAGAGAAAAATCAAGAAAGCACAATCACTAGAGCAGAGATAACAGAATTTCTGAATTCCCTGAAAACAATCTATATAAATGCATGTGAAATAATACACCAGCATCTGTGGCCCACACGTCACATATCAGGAACTGATGTCAGAATATAAGGTAAACATGTTACTGTGAAAACACAAATCCTCACAAATCATTAGGCAGTAAGGCTGAATGAAGCATCC------------CCCCACGCACAG-CGCAGTGAGGCAGTGTCCAGCAGCCCTAGTGCTCCCCGCGCCCCA-GTCCAGTCTCTGGCAACATCAGGTACTTCCCACGAATAACGAGGAGCCTTTCAACATTTTCACAACATCTCAAAACCGACCCCTTTTCGAGCTTAAATGGCAC-GGATCTGG-AAAGGGAAACTATACACAGAATCAGAAAAGATGACTGCCCCCAAGGGATTACAGAAAAGGCGGCAGTCAGGTGTTCAATGAAGTAAAACGTGACC-----TTCCCAGGGGAGGGGGGATCCATTGAGCTGAAACTGGCAAGAAGGTAACTCCAGGGAGCTCACAACACC-CAAGGACCCGGATTTCCCGCCGCCTGAACGCCCAGTATTCGCACACTGATAAGAA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204132223 971 + 204313951 aaaaaGCAGGCTGCTAAAATGGATCATAAATCTTGCATCACTCACTGGAAAACCTCTCAAAATGAACATCTCTGAGACATGGCCGCTGAGGAGGGCACTCCGTGGGGCTTGTATCACC--AGTGATGAACCACGTGAACCTGGGTGGTCATCTGACTGTATTTAACATGTGATGCGACACACAGAGCCACTTGCATCTATTGTGGTCAACATTTAGGACGGTTTAAGCTATGATCTGCCAAACTGCAGCCTACTGGATTCCAGCTTCTCCTGGCGCCTTTTTCTAGTGGCCCTGTCCTGCACTTACCCCGAGTATAAATGAACTGGCAAAGATGCAAA-TTTAAAAAGGGGGATTTAAGAATAATGAAAAGAGGAAAATCAAGAAAGCACAATCACTGGTGCAGAGACAACAGAATTTCTTAGTTCCCTGCAATCAGTCTACGTAAATGCATGTGAAATAATACCCCAGCATCCGTAGCCCACACATCACACATTAGGAAC--ATGTCAGAATACAAGGTGAACATGTCACTCTGAAAACACAAATCCTCACAAATCAATAGGCAGTAAGGCTGAATCCAGCC-CCCTCCCGCC----CCCGCAGCACAGTCACAGTGAGGCAGCGTCTAGCAGCCATGATGCTCCCCGCACCCCA-GTCCAATCTCTGGAATCGTCAGATATTTCCCACTAATAAAGAGGAGCCTCACAACATTTTCA---CATCTCAAAACTGACCCCCTTTCCAGCTTAAATGGCACGGGATCTGGAAAAGATAAACTATACACTGGATGGGAAAAGATGACTG--CATGAGGGAATACGGGAACGG--GCAGTCAGGTGTTCAACGAAGTAAAATGTGTCTAAAGGTACTGCAGGGGA-GGGGATCAACTGAGCCGAAACTGGCAAGAAGGTAACTCCAGAGAGCCCCCAGT-CG-CAAGGACCCAGATTCC---CTGCCCGAACGCCCAGTATTCCCACACTGATAAGAA i calJac3.chr2 I 1023 C 0 a score=706239.000000 s hg38.chr3_KI270937v1_alt 158283 419 + 165607 CGCCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCCAGGAACCCAGTCCCAGTTTCTGCAGTTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAAGCCCTCCAACAATCACCCCCC--------------------AGTGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCCAGGAAATTCAAGGACCCCCAACTTACCAAAAGGCTTTCGGCTGGACAGAGCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGCGCTCACGCACGCCGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAG---TAATAATTTGT s panTro4.chr3 201698486 422 + 202329955 CGCCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCCAGGAACCCAGTCCCAGTTTCTGCAGTTCCTGTAACAGCCAAGTTCCCACACAAGTGCTGCCTGAGCTCCCCAAGCCCTCCAACAATCACCCCCC--------------------AGTGCCCTTGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACCCAGGAAATTCAAGGACCTCCAACTGACCAAAAGGCTTTCGGCTGGACAGAGCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGTGCTCACGCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATAATTTGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2479358 422 - 202140232 CACCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAGTCCTTTCCCCAGGAACCCAGTCCCAGTTTCTGCAGTTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAACCCCTCCAACAATCACCCCTC--------------------AGTGCCCTCGAAGGTCCATTCAGAGAAGTCACCAAGATGCAGTCACCGAGGAAATTCAAGGACGTCCAACTTACCAAAAGGCTTTCGGCTGTACAGAGCTAACCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGTGCTCACGCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGCGGTAGCCACAAAATAAACCAGAAGCATCTCCTCCATGAACCAGTAATAATAATTTGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2920153 422 - 123690457 CACCT-CCCCATAACTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCCAGGAATCCAGTCCCAGTTTCTGCAGTTCCTGTAACAGCCACGTTCCCACACAAATGCTGCCTGAGCTCCCCAAGCCCTCCAACAATCACCCCCC--------------------AGTGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTCACTGAGGAAATTCAAGGACCTCCAACCTACCAAAAGGCTTTCGGCTGTACAGAGCTAACCTTCCTATTCCCCTCCC-AAGCCTACAGCCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGTGCTCACGCACGCAGTTGTTAGCTGGCTCGGTGAGGCACTCCAAGCAGTAACAGTGGTGGCCACAAAATAAACCAGAAGCATCTCCACCATGAAGCAGTAATGATAATTTGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1620735 419 + 181584905 CACCT-CCCCATAATTCCCCTGCCAGCGCCTCCAACACCCCCAATCCTTTCCCCAGGAATGCAGTCCCCGTGTTTGCGGCTCCTGTAACAGCCACGTCCCCACACAAGTGCTGCCTGAGCTCCCCAAGCCCTCCAACCACCACCCCCC--------------------AATGCCCTCGAAGGTCTATTCAGAGAAGTCACCAAGATGCAGTTACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGCTTCCGGCTGTACAGAGCTAAGCTTCCTATTTCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCTTGTGCTCATGCACGCAGTTGTCAGCCGGCTTGGTGAGGCACTCCA---AATAACAGCGGCAGCCACAACAGAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATACTTTGT i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1476298 418 + 91010382 CACCT-CCTCATAATTCCCCTGCCAGCGCCTCTAGCACCCCCAATCCTTTCCCCAGGAATGCAGTCCCCGTTTCTGCGGCTCCTGTAACAGCCACGTTCCCACACAAGTGCTGCCTGAGCTCCCCAAGCCCTCCAACAATCACCCCGC--------------------AATGCCCTCGAAGGTCTATTCAGAGAAGTCACCGAGATGCAGTTACCGAGGAAATTCAAGGACCCCCAGCTTACCAAAAGGCTTCCGGCTGTACAGAGCTAAGCTTCCTATTCCCCTCCT-AAACCTACAACCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGTGCTCATGCACGCAGTTGTTAGCCGGCCTGGTGAGACACTCC----AATAACAGCGGCAGCCACAACACAAACCAGAAGCATCTCCACCATGAAGCAGTAATAATACTTTGT i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204133194 419 + 204313951 CACCTCCCCCATAAATCCCTTGCCTGCACCTCCAACACCCCCAGTCCTTTCCCCCAGAACCCAGTCCCGGTATCTGCAGTTCCTGCAGCAGTCACATTCCCACACAAGTGCTGCTTGAGTTCCTCAAGCCCTCCAACAATCACCTCCCAGGCCGCCTGGTAACCCTTTAGTGCCCTCGATGGTCTATGCAGAGAAGTCACCAAGGTGCAGTCACCGAGGAAATTCAAGGACCTCCAACTTACCAAAAGGGTTTCTGCTG--CAGAGCTAATCTTCCTACCCCCCTCCTAAAACCCACACCCTAGTTTTCATTTCTCAAGAAGCCTTTCCCTGTGCTCACGCACGCAGCTGTTAGCTGGCTCGGTGAGGCACT-----------------------CAAAATAAACCAGAAGCATCTCCACCATGAAGCGGTAATAATAACGTGT i calJac3.chr2 C 0 I 309 e papAnu2.chr6 174406593 570 - 174439528 M a score=104798.000000 s hg38.chr3_KI270937v1_alt 158702 79 + 165607 CCTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACTGTGAGCAGGGCAGGCTCG----------------------------------CGGCTTC s panTro4.chr3 201698908 79 + 202329955 CCTAACGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACTGTGAGCAGGGCAGGCTCG----------------------------------CGGCTTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2479780 79 - 202140232 CCTAATGATTCCTTTGTCTTTGGAAAATCAACTTCAGAAAGAAAGTTATCCACTGTGAGCAGGGCAGACTAG----------------------------------CGGCTTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2920575 79 - 123690457 CTTAATGATTCCTTTGTCCTTGGAAAATCAACTTCAGAAAGAAAGTTACCCACTGTGAGCAGGGCAGGCTCG----------------------------------CGGCTTC i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1621154 113 + 181584905 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACTGCGAGCAGAGCAGGCTTCTGGGTCCGGACCCAGGTCCCACGGGCCCACTCAGCGGCTTC i macFas5.chr6 C 0 I 41 s chlSab2.chr4 1476716 72 + 91010382 CCTAATGATCCCTTTGTCCTTGGAAAATGAACTTCAGAAAGAAAGTTATCCACTGTGAGCAGAGCAGGCTTC----------------------------------------- i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204133922 61 + 204313951 CCTGATGGCTTTTTTGTCCTTGGAAAATCAACTCCA------------------GCGAGCACAGCAGGCTCG----------------------------------AGGCTTC i calJac3.chr2 I 309 C 0 e papAnu2.chr6 174406593 570 - 174439528 M a score=1623664.000000 s hg38.chr3_KI270937v1_alt 158781 860 + 165607 TTGGTCCGGAGACCCAGGTCCCACTGGCCCACTCACCCTTGGAGAGAGCTTGCTGAAGCTGGGTGTCCGATATCACTCCACTCC--TCTCTATCAACCCTATAACATCAAGAAGACCAAACAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCGGTCCCGCTGAGGAGTACAGCGGAATCAAGGAAGTGCCCCAGGAGCC-ACGTCCAAGTGTGTTCTTCCCCTAAGAGGACAATCATCTTTCTCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGACCTGTCTGAATTCCCATTTGCACCAGTTTCCCTTTTTCACAGACAAGACAAGATTCCCTCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCATTCAGTGGAAAAGCGACCAGGGACAGAAGGCGCCGCCATAAAGGTCACCTGGCCCGAGCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACATTTTAACAGCGGCCCAGACAGTCTGTTTCCGCTTTCCCCAAACAAGCA-CCCTGGAGACCCTCCCC-CGACGGCTC--GAGGCGAGAAACGGGGCCTGGCCCAGGAGCCGGTGGCCGCGACCTCGGGTCTGCAGTGGC-GCCCTCTGCACCTTGGGAAGCGCCCGACGCACAGGACAGGGACCGGGCAGGAGGCAGGGGCGGCCCCAGGAGACCGGGCAGCGGACGGGGGAGACCGCGGGGGACCCG-----------------------------------------------------------GAAGGGGATGGGGGCGGCCGCGGGGGTCGGGGCAGGGGATGGGGGCGGCCGCGTCGGTCGGG s panTro4.chr3 201698987 836 + 202329955 TTGGTCCGGAGACCCAGGTCCCACTGGCCCACTCACCCTTGGAGAGAGCTTGCTGAAGCTGGGTGTCCGATATCACTCCACTCC--TCTCTATCAACCCTATAACATCAAGAAGACCAAATAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCGTCCCGCT---GAGTACAGGGGAATCAAGGAAGTGCCCCAGGAGCCGACGTCC-AGTGTGGTCTTCCCCTAAGAGGACAATCATCTTTCTCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGGCCTGTCTGAATTCTCATTTGCACCAGTTTCCCTTTTTCACAGACAAGACAAGATTCCCTCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCATTCAGTGGAAAAGCGACCAGGGACAAAAGGCGCCGCCATAAAGGTCACCTGGCCCGAGCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACATTTTAACAGCGGCCCAGACAGTCTGTTTCCGCTTTCCCCAAACAAGCA-CCCTGGAGACCCTCCCCTTGACGGCTCTTGAGGCGAGAAAAAGGGCCTGGCCCAGGAGCCGGTGGCCGCGACCTCGGGTCTGCAGTGGC-GCCCTCTGCACCTTGGGAAGGGCCCGACGCACAGGACAGGGACCGGGCAGGAGGCAGGGGCGGCCACAGGAGACCGGGCAGGGGACGGGGGAGACCGCGGGGGACCCG-----------------------------------------------------------GAAggggatgggggcggccgcggcggtcggggaagggg------------------------ i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2479859 840 - 202140232 TTGGTCCCGAGGCCCAGGTCCCACTGGCCCACTCA-CCGTGGAGACAGCTTGCTGAAGCTCGGTGTCTGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCGAAACTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCATCCCGCTGAGGAGTACAGGGGAATCAAGGAAGTGCCCCAGGAGCCGACGTCCAAGTGTGGTCTTCCCCTAAGAGGACAATCATCTT--TCTCTCTTCTCACACCTCAATCCTTCCCTTCCTT-CCCTCCTGGACTGTCTGAATTCGCATTTGCACCAGTTTCCCTTTCTCACAAACAAGAAAATATTCCCTCAGATAACTAAGCCATTCCCTGGCCATGAGTTACTACAGTTTTGGTCATTCATTCAGTGGAAAAGCGATCAGGGACAGAAGGCGCCGCCATAAAGGTCACCTGGCCCGACCAGACGCCAGGTCGCTGCTTGTTCCTTGGCTGCTGACATTTTAACAGCCGTCCGGGCATTCTGTTTCCGCTTTCCCCAAACAAGCA-CCCTGGAGACCCTCCCCCTGACG-------------------GAGCCTAGCCCAGAAGCCGGTGG-CGCGACCTCGGGTCTGCAGTGGC-GCACTCTGCACCTTGGGAAGGGCCCGA--CACAGGACAGGGACCCGGCAGGAGGCAGAGGCGGCCACAGGAGACCGGGCAGGGGACGGGGGAGACCGCGAGGGGCCCG-----------------------------------------------------------GCAGGGGATGGGGGCGGCCGCGTCCGTCggggcaggggtcaggggccgccgcgggggtcggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2920654 835 - 123690457 TCGGTCTGGAGGCCCAGGTCCCATTGGCCCACTCACGGTTGGAGACAGCTTGCT-AAGCTCGGTGTCC-ATATCACTCCACTGCTGTCTTTATCAACCCTACAACATC---AAGACCAAATAAGCTGGCGATCGAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTC----CCTCCTGGAACCTCCGCCTCTCCCATCCCGCTGAGGAGTGCAGGGGAATCAAGGAAGTGCCCCAGGAGCCGACGTCCAAGTGTGGTCTTCCCCTAAGAGGTCAATCATCTT--TCTCTCTTTTCCCACCTCAATCCTTCCCTTCCTTCCCCTCCTGGCCTGTCTGAATTCGCATTTGTACCAGTTTCCCTTTTTCACAAACAAGAAAAGATTCCCTCAGATAA-TAAGCCATTCCCTGGCCATGAGTTACTACAGTTTCGGTCATTCATTCAGTGGAAAAGCGACCAGGGACAGAAGGCACCCCCATAAAGGTCACTTGGCCCAACCAGACGCCAGGTCGCTGCTTCTTCCTTGGCTGCTGACATTTTAACAGCGGCCCAGGCGGTCTGTTTCCGCTTTCCCCAAACAAGCA-CCCTGGAGACCCTCCCCCTGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCAGGAGCCGGTGGCCACGACATCGGGTCTGCAGTGGCTGCACTCTGCACCTTAGGAAGGGCCTGACGCACAGGACAGGGACCGGGCAGGAGGCAGGGGCAGCCACAGGAGACCGGGCAGGGGACGGGGGAGACTGCGAGGGACCTG-----------------------------------------------------------GCAGGGGATGGGGGCGGCCGCGGGGGTCGGGGCAGGGG------------------------ i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1621308 835 + 181584905 TGGGTCCGGA--CCCAGGTCCCACGGGCCCACTCACCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAGTAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACTGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGCTGAGGAGGACACGGGAATCAAGGAAGTGCCGCAGGAGCCCACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTT--TCTC----------TCTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTCACATTTGCACCAGTTTCCCTTTTTCACAAAC-----AAGATTCCCTCAGGTAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCATTCCGTGGAAAAGCGA-CCGGGACAGAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA-CTTAACAGC-GCCCAGACATTCTGTCTCTGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCGGGAGCCGGTGGCCGCGACCTCGGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAGGGCAGGGACCGGGCAGGAGGCGGGGGCGG-----------C-CACAGGGGACGGGGGAGACCGCAGGGGACCGG-----------------------------------------------------------GCAGGGGACGGGAGCGGCCGCGTCGGTCGGGGCA-GGGACGGGGGCGGCCGCGGGGGTCGGG i macFas5.chr6 I 41 C 0 s papAnu2.chr6 174407163 898 - 174439528 tCGGTCCGGA--CCCAGGTCCCACTGGCCCACTCACCGTT-GAGAGAGCTTGCTG-AGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCCAAAGTtcaggaaaagcaaaacaaacgtCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTCGGAGCCTCCTGGAACCTCCGCCTCTCCCATCCCGCT---GAGGACACGGGAATCAAGGAAGTGCCCCAGGAGCCCACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTT--TCTT----------TCTCaatccttcccttccttcctctcctggcCTGTCTGAATTCCCATTTGCACCAGTTTCCCTTTTTCACAAAC-----AAGATTCCCTCAGATAACTACGGCATTCCCTGGCCATGAGTCACTCCAGTTTCGGTCATTCGTTCCGTGGAAAAGCGACCCGGGACAGAAGGCGCCGCCGGAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA-CTTAACAGC-GCCCAGG----CTGTCTCTGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCGCCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCGGGAGCCGGTGGCCGCGACCTCGGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCAcaggacagggacggggcaggaggcgggggcggccgcgggagacc-cacaggggacgggggcggccgcaggggacccgcaggggacgggggcggccacaggagacccacaggggacgggggcggccacaggggacccgcaggggacgggggcggccacaggggacccggcaggggacgggcgcggccgcaggggtcggg i papAnu2.chr6 M 570 C 0 s chlSab2.chr4 1476788 823 + 91010382 TGGATCCGGA--CCCAGGTCCCACTGGCCCACTCACCGTTGGAGAGAGCTTGCTGAAGCTCGGTGTCCGATATCACTCCACTCCTGTCTTTATCAACCCTACAACATCAAGAAGACCAAATAAGCTGGCGATCCAAAGTTCAGGAAAAGCAAAACAAACGTCTCCTGTCAACCCTGCACCGACTCTGGAAGGCTCGGAGCCTCCGGGAACCCCCGCCTCTCCCATCCCGCTGAGGAGGACACGGGAATCAAGGAAGTGCCCCCGGAGCCCACGTCCAAGCGGGGTCTTCCCCTAAGAGGCCAATCATCTT--TC------------TCTCAATCCTTCCCTTCCTTCCTCTCCTGGCCTGTCTGAATTCACATTTGCACCAGTTTCCCTTTTTCACAAACAAGAAAAGATTCCTTCAGATAACTAAGGCATTCCCTGGCCATGAGTCACTACAGTTTCGGTCATTCATTCCGTGGAAAAGCGACCCGGGACAGAAGGCGCCG-CGTAAAGGTCACCTGCCCCGAGCAGACGCCAGGTCGCTGCTGCTTCCTCGGCTGCTGACA-CTTAACAGC-GCCCAGGCAGTCCGTTTCCGCTTTCCCCGAACAAGCACCCCTGGAGACCCTCCACCCGGCGGCTCCTGAGGCGAGAAAAAGGGCCTAGCCCAGGAGCCGGTGGCCGCGACCTCGGGTCTGCAGCGGC--TACTCTGCACCTCTGGAAGGGCCCAACGCACAGGACAGGGACCGGGCAGGAGGCGGGGGCGGCCACAGGGGGCC-CACAGGGGGCGGGGGAGACCGCAGGGGACCCG-----------------------------------------------------------GCAGGGGACGGGCGCGGCCGCGTCCGTC---------------------------GGTCGGG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204133983 798 + 204313951 TAGGTTCGCAGGCCCAGGCCCCACTGGCCCACTCACCGTTGGAGAGTGCTTGCTGAAGCTCGCTGTCCGATATCACTCCACTTCTGTCTTTATCAACCCTATGACATCAAAAAGACCAAATGAGCTGACGATCCAAAGCGCAGAAAAAGCAAAACGAACGTCTCCTGTCAGCCCTGCACTGAGTCTGGAAGGCTC----CGTCCTGGAACCTCCGCCTCTTCCATCCTGCGGGAGGAGAACCGGGGATAAAGGAAGTGCCCCAGGGGCCGAAGCGCAAGCGTGGTCTTCCCCTAAGAGA-------------T-------------CCTCGGTCCTTCGCTTCCTTCCTCTCCTGGCATATCTGAATTCACACCTCCACCACTTTCCCTATTTCATAGACAAAAAAA----TTCTCAGACAACTGAGCCATTCCCTGGCCATGAGTCACT--AGTTTCGGTCAATCA----GTGGAAAAGAGACCAGGGACAG-AGTCGCCGTCGTAAAGGTCACCTGCCCCAAGCAGACGCCAGATCTCAGCTTCTTCCTCGGCTGCCGGCATTTTAACAGC-GCCCAGGCAGTCTGCTTCTGCTTTCCCCAAACAGGCACCCCCGGAGACCCTCGACCTGGCTGCTCTCGGGGCGAGAAAACGGGCCTAGCCCAGAAGCCTGGGGCCGCGACCTCGGGGCTGCAGTGGC-AGACTCTGCACCTCGATAAGGGCCCGAGGCACGGGCCAGGGACCgggcaggaggcgggggcgg-------------------------------ccacgagggtcgcc-----------------------------------------------------------gcaggagacggggttggccacggaagtcagggcaggggacgggggcggacgcgagggtcggg i calJac3.chr2 C 0 C 0 a score=111489.000000 s hg38.chr3_KI270937v1_alt 159641 113 + 165607 GTAGGGTTCGGGGGCGCCCGCGGGGGTCCGGGCAGGGG-C---------------------GGGGGAGACGGCGGAGGTCGGGGCA-------GGGGACGGGGGAGGCCG-------------------------------------CTGGGGACCCGGCAGGT--------------------------------------------------------------------------------------------GACGGGGGAGGCCGC s panTro4.chr3 201699823 107 + 202329955 -------tcgggggcggccgcgggggtcggggcaggggtc---------------------gggggaggcggcggcggtcggggca-------ggggacgggggaggccg-------------------------------------ctggggacatggcaggt--------------------------------------------------------------------------------------------gacgggggaggccgc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2480699 182 - 202140232 gcaggggtcgggggaggccgtgggggtcggggcaggggtc---------------------gggggcggccgcggggatcggggca-------ggggatgggggcggccgcgggggtcggggcAGTGAACGGGGTGGGGGGGGCCCTCTGGGGACCCGGCAGGTGATGGGAGAGGCCGCGGGGCAACCAGCAgag-------------------------------------------------------------gatgggggaggccgc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2921489 199 - 123690457 -------TCGGGGGCGGCCGCGGAAGTCCGGGCACGGTAC---------------------GGGGGAGGCGGTGGCGGTCGGGGCA-------GGGAACGGGGGAGGCCG-------------------------------------CTGGGGACCCGGCAGGTGACGGGGGAGGCCACGGGGCAACCGGCTGGGAACGCGGCAGCCGCGTCAGTCGGGGCAGGGGTCGGGGGCGGCCGCTGGGGACCCGGCAGGTGATGGGTGAGGCCGC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174408061 142 - 174439528 gcaggggacgggggaggccgcggcgggcggggcaggggacgggggacgggggaagggggaagggggaggccgcgggggacggggcaggggaagggggaagggggaggccg-------------------------------------cgggggacccgacaggg--------------------------------------------------------------------------------------------gacagaggaggccgc i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1477611 114 + 91010382 GCAGGGGTCGGGGGCGGCCGCGGGGGTCGGGGCAGGGGAC---------------------GGGGGAGGCCGCGACAGTCGGGGCA-------GGGGTCGGGGGCGGCCG-------------------------------------CGGGGGTCGGGGCAGGG--------------------------------------------------------------------------------------------GACGGGGGAGGCCGC i chlSab2.chr4 C 0 I 9 s calJac3.chr2 204134781 114 + 204313951 gcaagggacggaggaggacgcagggaacccggcagcgaac---------------------gggggcggccgcgggagtcggggca-------agggacgggggaggacg-------------------------------------caggggACCCGGCAGCG--------------------------------------------------------------------------------------------AACGGGGACTGCCGC i calJac3.chr2 C 0 C 0 e macFas5.chr6 1622143 0 + 181584905 C a score=8366.000000 s hg38.chr3_KI270937v1_alt 159754 9 + 165607 GGGGCAACC s panTro4.chr3 201699930 9 + 202329955 ggggcaacc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2480881 9 - 202140232 ggggcaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2921688 9 - 123690457 GGGGAAACC i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174408203 9 - 174439528 gggggaACC i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204134895 7 + 204313951 --GAGAATC i calJac3.chr2 C 0 I 2 e chlSab2.chr4 1477725 9 + 91010382 I e macFas5.chr6 1622143 0 + 181584905 C a score=19372.000000 s hg38.chr3_KI270937v1_alt 159763 45 + 165607 GGCAG------GGAACGGGGTT---GGCCGCGGGGGTCGGGACACGGGTC------------------------------CGGG s panTro4.chr3 201699939 45 + 202329955 ggcag------ggaacggggtt---ggccgcgggggtcgggacacgggtc------------------------------cggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2480890 45 - 202140232 ggcag------cgaacgggggc---ggccgcgtgggtcggggcaggggtc------------------------------gggg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2921697 75 - 123690457 GTCAG------GGAACGGGGGC---GGCCGCGGCGGTTGGGGCAGGGGTCGGGGTTGGGGTCGGCCGCGGGTTCGGGGCAGGGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174408212 42 - 174439528 GGCAGTGAACCGGGTCCGCGGCGTTGGGGGCAGGAGTCGGGG------------------------------------------ i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1477734 38 + 91010382 GGCAG------GGGTCGGGGGC---GGCCGCGGGGGTCGGGGC---GGTC---------------------------------- i chlSab2.chr4 I 9 C 0 s calJac3.chr2 204134904 43 + 204313951 GGCAA------GGGACGGATGA---TGACGCAGGGCCCGG--CACGGGAC------------------------------TGCG i calJac3.chr2 I 2 C 0 e macFas5.chr6 1622143 0 + 181584905 C a score=450300.000000 s hg38.chr3_KI270937v1_alt 159808 274 + 165607 GCAGCTGCGGGGGAGGCGGGA----GGTGCCGGGGCGGTGCCAG---------------GTGGCAGCTCTGGAAGACGTTCCACAGGAAGCTCTGGTCGGGCAGCGC----------CGCGCCCG-------------CAGCAGGCCCAGGGCCG--CCCAAGG--CCGGGGCGGTAGGAGTAGGCGGCCAAGGGCC-------AAGGCGCGCGGCTGGGCTGAGGCACCTGCGGCCACGGGCGA--CCTCAGAGCGACTGTGCTTCCGCCTCTGCC-GGGGGCAGGGCCAGGCGTTACCGCCGCTTCCGGGGGCGCAGGAAATGCGCGT s panTro4.chr3 201699984 274 + 202329955 gcagctgcgggggaggcggga----ggtgccggggcggTGCCAG---------------GTGGCAGCTCTGGAAGACGTTCCACAGGAAGCTCTGGTCGGGCAGCGC----------CGCGCCCG-------------CAGCAGGCCCAGGGCCG--CCCGGGG--CTGGGGCGGTAGGAGTAGGCGGCCAAGGGCC-------AAGGCCCGCCGCTGGGCTGAGGCGCGTGCGGCGACTGGCGA--CCTCAGAGCGACACCACTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCGCTTCCGGGGGCGCAGGAAATGCGCGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2480935 276 - 202140232 gcggctgcggcggaggcggga----ggtgcctgggcggTGCCAG---------------CCCGCCCCTCTGGAAGACGTTCCACAGGAAGCTCTGGTCGGGCAgcgc----------cccgcccg-------------cagcaggccccgggccg--cccaggg--ccggggcggTAGCAATGGGCGGCCAAAGGCC-------AAGGCGCGCGGCTGGCCCGAGGCGCCTGCGGCGACTGGAGATCTCTCAGGGCGACTGCGCTTCCTCCTCTGCG-GGGGGCAGGGCCTGGCGTCGCCGCCACTTCCGGGGGCGCAGGAAATGCGCGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2921772 252 - 123690457 GCGGCTGCGGCGGAGGCGGGG----GGTGCGGGGGCAGTGCCAG---------------CCGGCACCTCTGGAAGACGTTCCACAGGAAGCTCTGTTCTGGCAGCGC----------C----------------------------------CTG--CCCGGGG--CCAGGGCGGTAGGAGTATGCGGCCAAGGGCT-------GAGGCGCGCGGCTGGGCTGAGGCGCCTGCGGCAACGGGAGACCTCTCAGGGCGGCTCCGCTTCCGCCTCTGTC-GGGGGCGGGGCCTGGCGTTACCGCCGTTTC---GGGCGCAGGAAATGTGCGT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622143 267 + 181584905 GCGGTCGCCGCGGAGGCGGGA----GGTGCCCGGGCGGGGCCAG---------------GCCGCACCTCTGGAAGACATTCCACAG-AAGCACTGGCCCGGCAGCGC----------CGCGCCCG-------------CAGCAAGCCC------------------CCGGAGCGGTAGGGGCAGGCGGCCAAGGGCCAAGGGCGAAGGCGCGCGGCCGGGCTGAGGCGCCTGCGGCGACGGGAGATCTCTCAAGGCGATTCCGCTTCCGCCTCTGCC-GGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGCGT-G i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174408254 278 - 174439528 GCGGCCGCAGCGGAGGCGGGA----GGTGCTGGGGCGGTACCAG---------------GCCGCACCTCTGGAAGACGTTCCACAGAAAGCTCTGGTCCGGCAGCGC----------CGCGCCCG-------------CAGCAGGCCCTGGGCCG--GCCCCGGGGCCGGGGCGGTAGGAGTAGGCGGCCATGGGCC-------AAGGCGCGCGGCTGGGCTGAGGCGCCTACGGAGACGTGAGACCTCTCAGGGCGACTCCGCTTCCGGCTCTGCC-GGGGGCAGGGCCTGGCGTTACCTCCACTTCCGGGGGCGCAGGAAATGCGTAG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1477772 262 + 91010382 ------GCCGCGGAGGCGGGA----GGTGCCCGGGCGGTGCCAG---------------GCCGCACCTCTGGAAGACATTCCACAG-AAGCACTGGCCCGGCAGCGC----------CGCGCCCA-------------AAGCAAGCCC------------------CCGGAGTGGTAGGAGCAGGCGGCCAAGGGCCAAGGGCCAAGGCGCGCGGCCGGGCTGAGGCGCCTCCGGCGACCGGAGATCTCTCAAGGCGATTCCGCTTCCGCCTCTGCCAGGGGGCAGGGCCTGGCGTTACCGCCACTTCCGGGGGCGCAGGAAATGCGT-G i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204134947 315 + 204313951 GCTGCCGCGGGTCGGGCAGGATCCGGGCGCC-GCGCAGAGCGAGCGAGTGAGGCGTGCAGCCGCA-CTCTGGAAGACGTT-CACAG-GAGCTCTGGTCCGGCAGCGCNNNNNNNNNNCGAGCTCGGTACCCGGGGATCCCACTgggccggggccggccccgggg--ccggggcggTAGGAGTAGGCGGCCATGAGCC-------GATGCGCGCGTCTGGGCTGAGGCGCGGGCGGCTAAGGGAGAAGGCTCAGGGCGACTCCGCTTCCGGGTCTGCC-GGGGGCAGGACTTGGCGT-ACCGTCACTTCCGGGGACGCAGGAAACGCGTGA i calJac3.chr2 C 0 I 97 a score=20272.000000 s hg38.chr3_KI270937v1_alt 160082 45 + 165607 TGTCCGGGAT--------CCTCCGGCGCAGGCC-----------------------------------------------ACCTGCGCG--------------------------------------------------CGGGGCC-GGGA s panTro4.chr3 201700258 44 + 202329955 TGTCCGGGAT--------CCTCCGGCGCGGGCC-----------------------------------------------ACCTGCGCG--------------------------------------------------CGGGG-C-GGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481211 43 - 202140232 TGCCCCGGAT--------CCTCCAGCGCAGGCC-----------------------------------------------ACCTGCGTG--------------------------------------------------CGGG--C-GGGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2922024 45 - 123690457 TGTCCGGGAT--------CGTCCCGCGCAGACC-----------------------------------------------AGCTGCGGG--------------------------------------------------CGGGGCC-GGGA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622410 43 + 181584905 TGCGCGGGAT--------GCTCCGGCGC-GGCC-----------------------------------------------GCCTGGGCG--------------------------------------------------CGGTG-C-GTGA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174408532 149 - 174439528 TCTCCGGGATGGTCACGGGGTCCCGCGC-GGCCAATCCCCTCGCAGCTCAGTTGCCAAGCAACGCCCTGGCGCCTGCGGGGCCTGTGCGGTCCGGGGCGTCTGGAGAAAGCCAGAGCTCTGGAGCAGGCAGCCGTCTACCGGTG-CTGGGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1478034 43 + 91010382 TGCGCGGGAT--------GCTCCGGGGC-GGCC-----------------------------------------------ACCTGGGCG--------------------------------------------------CGGTG-C-GTGA i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204135262 97 + 204313951 I a score=356922.000000 s hg38.chr3_KI270937v1_alt 160127 172 + 165607 AGGCGCTTGGAGGAAATGTCCCGCGCCGCGACCCGGGACAGGCAGTGATGGAGCAGGGATTTCGTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacacctgggatccctgcg s panTro4.chr3 201700302 172 + 202329955 AGGCGCTTGGAGAAAACGTCCCGCGCCGCGACCCGGGACAGGCAGTGATGGAGCAGGGACTTAGTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTGGGAAACTCTGggcggggcgcggtagctcacacctgtgatccctgcg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481254 172 - 202140232 AGGCGCTTGGAGAAAATGTCCTGCGCCGCCACCCGGGGCAGGCAGTGATGGAGCAGGGATTTAGTTTGCCTTTTAGTTCTTGTATAAAAAGAAGTTTTGACGTGAATATGATTCACGCTAACAGTCGGAAACTCCGggcggggcgcggtagctcacacctgtgatccctgcg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2922069 172 - 123690457 AGGCGCTTGGAGAAAATGTCCTGCGCAGCGACCCGGGACAGGCAATGATGGAGCAGGGATTTAGTTTGCCTTTTAGTTCGTGTATAAAGAGAAGTTTTGACGTGAATATGATTCCCGCTAACAGTCGGAAACTCTGggcgggacgcggtagctcacacctgtgatccctgcg i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622453 168 + 181584905 AGGCGCTTGGGGAAAATGCCCCGCGCCGCGATCCGGGACGGGAAGTGATGGAGCAAGG----ACTTAGCCTTTTAGTTCTCTTATAGAAAGAAGTTTTGACGTGAATGTGATTCAGGCTAACAGTCGGAAACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174408681 172 - 174439528 AGGCGCTTGGAGAAAATGTCCGGCTCCGCGACCCGGGACGGGAAGTGATGGAGTAGGGAGTTAGTTAGCCTTTCAGTTCTTGTATAAAAAGAAGTTTTGACGTGAACGTGATTCAGGCTAACAGTCGGAAACTCTGGGcggggcgcggtagctcacgcctgtgatccctgcg i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1478077 172 + 91010382 AGGCGCTTGGGGAAAATGCCCCGCGCCGCGACCCAGGACGGGAAGTGATGGAGCAAGGACTTAGTTTGCCTTTTAGTTCTTTTATAGAAAGAAGTTTTGACGTGAATGGGATTCAGGCTAACAGTCCGAGACTCTGggcggggcgcggtagctcacgcctgtgatccctgcg i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135359 154 + 204313951 AGGCGCGTGGAGGAAGTGTCCAGCGACGAGTCCCGGGACTGGAAGTGATGGAGCAGAGTCCGAGTTTGCCTTTCAGTTCTTGTATAAAAAGAAGTTTTGACGCGAGCGTGATTCACACTAACAGTCGAAAACTCTGGGCGGGG-GCG-----------------tcccggcg i calJac3.chr2 I 97 C 0 a score=271061.000000 s hg38.chr3_KI270937v1_alt 160299 248 + 165607 ctttgtgaggcggaggcgggcggagctcttgagcccagcagtgcggaccagcctgggcagcggggctagaccccatccctacaaaaattacagcaagtagtcgggcgtggt---gggctcctgtggtcccatgtactccgtgggctgaggcgggaggatcgcctgagcccgggaggtcgaggccgcagggagccgagatcactgcagctccagcccggtggacagcgagactctgc----------------------------aaaaaaaaaaaaaaa s panTro4.chr3 201700474 258 + 202329955 ctttgggaggcggaggcgggcggagctcttgagcccagcagtgcggaccagcctgggcagcgtggctagaccccatccctacaaaaattacagcaagtagtcgggcgtggt---gggctcctgtggtcccatgtactccgtgggctgaggcggcaggatcgcctgagcccgggaggtcgaggccgcagggagccgagatcactgca-ctccagcccggtggacagcgagactctgcaaaaaaa-----------------aaaaaaaaaaaaaaaaaaa i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481426 246 - 202140232 ctttgggaggcggaggcaggcggagctcttgagcccagcagttcggaccagcctgggcagggtggctagaccccatccctacaaaaattacaaaaagtagtcgggcgtggtggcggcctcctgtggtcccatctactctgtgggctgaggcgggaggatcgcctgagcctgggagctcgaggctgcagggagcccagatcattgcaactccagcccggtggacagccagactctgc---------------------------------aaaaaaaaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2922241 251 - 123690457 ctttggaaggtggaggcgggcggagctcttgagcccagcagttgggaccagcctgggcagcgtggctagaccccatccctacaaaaattacaaaaagtagtcgggcgtggtggcgggctcctgtggtcccatctactccgtgggctgaggcggcaggatcgcctgagcctgggagctggaggctgcagggagccgagatcacggcaactccagcctggtggacagcgagactctga----------------------------aaaaaaaaaaaaaaa i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174408853 278 - 174439528 ctttgggaggcggaggcgggcggagctcctgagcccagcagttcggaccagcctgggcagcgtggccagaccccatccctacaaaaattacagaaaatagtcgggcgtggtggtgggcccctgtggtcccatctactccatgggcagaggcgggaggatcgcctgagcccgggaagtcgaggccgcagggagccgagatcactgca-ctctagcccggtgGACAGCCAGACTCtgcccaaaaataaataaataaataaataaataaataaataaataaa i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204135513 247 + 204313951 ctttgggaggcggaggcgggcggagctgttgagtccagcacttcggcccggcctgggcagcttggcgaaacttcatccctacaaaaattacag-aagccgccgggcgcggtggcgggctcctgtgggcctagctgccccgggggctgaggcgggaggatcgcctgagccc--tcagtcggggcctcagggagccgagatcactgca-ctccagcccggtcgaccgccagactctgc----------------------------cagaaaagaaaaaaa i calJac3.chr2 C 0 C 0 e chlSab2.chr4 1478249 0 + 91010382 C e macFas5.chr6 1622621 0 + 181584905 C a score=30782.000000 s hg38.chr3_KI270937v1_alt 160547 47 + 165607 aaaaGCAAGCAggccgggtgcggtggctgacgcgtgtaatcccagca s panTro4.chr3 201700732 47 + 202329955 aaaaaaaaGCAggccgggtgcggtggctgacgcgtgtaatcccagca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481672 47 - 202140232 aaaaaaaaGCAggccaggtgcggtggcccacgcctgtaatcccagca i ponAbe2.chr3 C 0 C 0 s papAnu2.chr6 174409131 47 - 174439528 taaataaagcaggcCGTGCGCAGTGTCTgacgcctgaaatcccagga i papAnu2.chr6 C 0 C 0 s calJac3.chr2 204135760 43 + 204313951 ----aaaTGCAggccgggcgcggtggctcacgcctgtaatctcagca i calJac3.chr2 C 0 C 0 e chlSab2.chr4 1478249 0 + 91010382 C e macFas5.chr6 1622621 0 + 181584905 C e nomLeu3.chr11 2922492 0 - 123690457 C a score=141050.000000 s hg38.chr3_KI270937v1_alt 160594 84 + 165607 ctttgggaggccgaggccggtggatcacctgaagtcaggagttcgagaccaacctggccaatatggagaaaccca-gtatctact s panTro4.chr3 201700779 84 + 202329955 ctttgggaggccgaggccggtggatcacctgaagtcgggagttcaagaccaacctggccaatatggagaaaccca-gtatctact i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481719 84 - 202140232 ctttgggaggccgaggccggtggatcacctgaagtcgggagttcgagaccaacctggccaatatggagaaaccct-atatctact i ponAbe2.chr3 C 0 C 0 s macFas5.chr6 1622621 84 + 181584905 ctgtgggaggccgaggccggtggatcacctgaagtcgggggttcgagaccagcctggccaatattgagaaacctc-gtatctact i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174409178 84 - 174439528 ctttgggaggtcgaggccggtggatcacctgaagtcgggagttcgagaccagcctgaccaatatggagaaacccc-gtatctact i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1478249 84 + 91010382 ctgtgggaggccgaggccggtggatcacctgaagtcgggggttcgagaccagcctggccaatattgagaaacctc-gtatctact i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135803 85 + 204313951 ctttgggaggctgaggcgggcggatcacctgaggtgggatgttcgagaccagcctgaccaacatggagacacccctgtctctgct i calJac3.chr2 C 0 C 0 e nomLeu3.chr11 2922492 0 - 123690457 C a score=1332164.000000 s hg38.chr3_KI270937v1_alt 160678 712 + 165607 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctactcgggacgctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaactccgtctcaaaaaaa--aaaaaaaaaaaaaaaaaGGCAAAGCACAATTCGCGTGGGAAGGGCAGTGTGCAGCGTTCTCCGTTGTCTGTTCCGCCCC-CAAAAGCTTCCCTCCTTTAGGTTTAACCTGCGCCCCCGCGCTCTGCATCAGCGCGGTCCCCGA---------CCGGTGCAGCTGGAAACAC-TGGGCGCCTCCCTGCCGGGCCCCTTCCCGCCCC--TGTGGTGGTGCAGCCCTGCCTCCCGC-------AAGACAGCACTGCCTTCGTGCTGGACACAGTTCTATGGTGGAGCCTGGAGTGCCTGTATC--------ACAAAT-CCCGGAGTTGGGAAGTGCCCACCT---TTGGGCCAGTGTGATCCCTGGGTCTTTCCCGGG---------GTGGTCTCATGCGGCCTTCCACTCCAGTCCTGTGTCCTGTGCCCCG-GTT-------------CAGAATACTACAATTATTCTCGTTATTTCATGGGGTTATTCCAGCTTTTCAGTTTCGTCAGTGCCTCATTCCATGAATGCTAACTTTTTTCATCCTCATAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG s panTro4.chr3 201700863 707 + 202329955 aaaaatac-----------aaaattagccgggcttggtggcgcacgcctgtaatcccagctactcgggacgctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaattccgtctc-----aa--aaaaaaaaaaaaaaaaaGGCAAAGCACAATTCGCGTGGGAAGGGCAGTGTGCAGCGTTCTCCGTTGTCTGTTCCGCCCC-CAAAAGCTTCCCTCCTTTAGGTTTAACCTGCGCCCCCGCGCTCTGCATCAGCGCGGTCCCCGA---------CCCGTGCAGCTGGAAACAC-TGGGCGCCTCCCTGCCGGGCCCCTTCCCGCCCC--GGTGGTGGTGCAGCCCTGCCTCCCGC-------AAGACAGCACTGCCTTCGTGCTGGACACAGTTCTATGGTGGAGCCTGGAGTGCCTGTAGC--------ACAAAT-CCCGGAGTTGGGAAGTGCACACCT---TTGGGCCAGTGTGATCCCTGGGTCTTTCCCGGG---------GTGGTCTCATGCGGCCTTCCACTCCAGTCCTGTGTCCTGTGCCCCG-GTT-------------CAGAATACTACAATTATTCTCGTTATTTCATGGGGTTATTCCAGCTTTTCAGTTTCTTCAGTGCCTCATTCCATGAATGCTAACTTTTTTCATCCTCATAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2481803 700 - 202140232 aaaaatac-----------aaaattaggcgggtgtggtggcgcacacctgtaatcccagctacttaagaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcaatgagccgagatcaggccgttgcactccagacctgggaaac---agcaaaactccatctc---aaaa--aaaaaaaaaaaaaaaaaggcaaaaCACAATTCGGGTGGGAAGGGCCGTGTGCAGCGTTCTCCGTTGTCTGTTCTGCCCC-GAAAAGCTTCCCTCCTTTAGGTTTAACCTGCGCCCCCACGCTCTGCATCAGCGCCGCCCGCGAC--------CCCGTGCAGTTGGAAACAC-TGGGCGCCTCCCTGCGGGTCCCCTTCCCACCCC--AGTAGTGGTGCAGCCCTGCCTCCCCC-------GAGACAGCACTGCCTTGGTGCTGGACACAGTTCTACCGTGGAGCCTGGAGTGCCTGTAGC--------ACTATC-CCCAGAATTGGGAAGTGCCCAGCT---TTGGGCCACTGTGATCCCTGGGTCTTTCCTGTG------CGCGTAGTCTCCTGCCGCCTTCCAC-CCAGTCCTGTGTCCTGTACCCCA-GTT-------------CAGGATACTACAGTTA------TTATTTCATGGGGTTATTCCAGCTTTCCAGGTTCTTCAGTGCCTCATTCCATGAATGCTAACTTTTTTCATCCTCATAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGA---TG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2922492 714 - 123690457 aaaaaCACACACACACAAaaaaacaggccgggtgcggtggctcacgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaatccgggaggcggagattgcagtgagccgagatcaggccattgcactccaggcctgggcaacaagagcaaaactccgtctc---------------aaaaaaaaaaaGGCAAATCACAATTCGGGTGGGAAAGGCAGTGTGCAGCGTTCTCTGTTGTCTGTTCCACCCT-GAAAAGCTTCTCTCTTTTAGGTTTAACCTGCTCCCCCACGCTCTGCATCAGCGCTGCCCTGGAC--------CCCATGCAGTTGGAAACAC-TGGGCGCCTTTCTGCGGGGCCCCTTCCCGCCCC--AGTGGTGGTGCAGCCCTGCCTCCCCC-------GAGACAGCACTGCCTTCGTGCTGGACACAGTTCTACCGTGGAGCCTGGAGTGCCTGTAGC--------ACAAATCCCCAGAATTGGGAAGTGCCCAGCT---TTGGGCCACTGTGATCCCTGGGTCTTTCCCGCG------CGCGTAGTCTCGTGCTGCCTTCCACGTCAGCCCTGTGTCCCGTACCTCA-GTT-------------CAGGGTACTACAGTTATTCTCATTACTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATCCCATGAATGCTAACTTTTTTCATCCTCATAGTT-CTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1622705 726 + 181584905 aaaaatat-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgctcgggaggctgaggcaggagaattgcttgaacccgggaggccgaagttgcagtgagccgagatcgggctattgcactccaggcctgggcaacaagagagaaactctgtctc---aaaaagaaaaaagaaaaaaaaaaggtaaaaCACAATTCGGGTGGGAAGGGCAGTGTGCAGT-------GTTGTCTGTTCCGCCCC-CAAAAGCTTCCCTCTTTTAGGTTTAGCCTGCGCCCCCACGCTCTGCATCAGCGCCACCCCCGACGCAGGCGCCCAGTGCAGCTGGAAACAC-TGGGCGCCTCCCTGCCTGACCCCTTCCCGCCCC-TGGTGGTGGTGCAGCCCTGTCTCCCCC-------GAGACAGCACTGCCTCCGTGCTGGACACAGTTCTGCGGTGGAACCTGGAGTGCCTGTAGC--------ACCAATCGCCGGAATTGGGAAGTGCCCAGCT---TTGGGCCACTGTGATCCCTGGGTTTT-CCCGCG------TGCGTACTC-CGTGCTGCCTTCCACCCCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATACTA---CAGGCTACTACAATTATTCTCATTATTTCATGGGGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCAAGAATGCTAACATTTTTCATCCTCGTAGTTCCTAGGATTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174409262 704 - 174439528 aaatatac-----------aaaattagccgggggtggtggcgcacgcctat--tcccagctactcgggaggctgaggcaggagaactgcttgaagccaggaggcggaggttgcagtgagcggagatcaggccgttgcactccaggcctgggcaacaagagcgaaactccgtctc---aaaa--aaaaaaaaaaaaaaaaagggaaaacgcATTTCGGGTGGGAAGGACAGTGCAGCGT--TCTCGGTTGTCTGTTCCGCCCCGTAAAAGCTTCCCTCCTTTAGGTTTAACCTGCGCCCCGGCGCTCTGCCTCAGCGCCGCCCCCGACG--------CCTTGCAGCTGGCAACAC-TGGGCGCCTCCCTGCCCGGTCCCTTCCGGCCCCTTGGTGATGGTGCAGCCCTGTCTCCCCC-------GAGACAGCACTGCCTCCGTGCTGGACACAGTTCTGCGGTGGAGCCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCCCAGCT---TTGGGCCACTGTGATCCCTGGGTCTT-------------------------TGCCGCCTTCCACCCCAgtcctgtgtcctgtgtcctgtgtcctgtgccctgGTTCAGGATACTACAATTATTCTCATTATTTCGTGGGGTTTTTCCAGCTTTTCAGGTTCTTCAGTGCCTCATTCCACGAATGCT----CTTTTCATCCTCGTAGTTCCAAGCGTTGTCTCTGAATTTTCACTAATTTGCCTGCCAAGATGTTG i papAnu2.chr6 C 0 I 3205 s chlSab2.chr4 1478333 726 + 91010382 aaaaatac-----------aaaattagccgggcgtggtggcgcacgcctgtaatcccagctgcgcgggaggctgaggcaggagaattgcttgaacccgggaggccgaagttgcagtgagccgagatcgggctattgcactccaagcctgggcaacaagagagaaactccgtctc---aaaaagaaaaaagaaaaaaaaaaggtaaaaCACCATTCGGGTGGGAAGGGCAGTGTGCGGT-------GTTGCCTGTTCCGCCCC-CAAAAGCTTCCCTCTTTTAGGTTTAGCCTGCGCCCCCGCGCTCTGCATCAGCGCCACCCCCGACGCAGGCGCCCAGTGCAGCTGGAAACACGGGGGCGCCTCCCTG-CTGACCCCTTCCCGCCCC-TGGTGGTGGTGCGGCCCTGCCTCCCGC-------GAGACAGCACTGCCTTCGTGCTGGACACAGTTCTGCGGTGGAACCTGGAGTGCCTGTAGC--------ACCAATCCCCGGAATTGGGAAGTGCCCAGCT---TTGGGCCACTGTGATCCCTGGGTTTT-CCCGCG------CGCGTACTC-CGTGCCGCCTTCCACCCCAGTCCTGTGACCTGTGCCCCG-GTTCAGGATACTA---CAGGCTGCTACAATTATTCTCATTATTTCATGGAGTTATTCCAGCTTTTCAGGTTCTTCAGTGCCCCATTCCATGAATGCTAACTTTTTTCATCCTCGTAGTTCCTAGGGTTGTCTCTGAATTTTCACCCAGTTGCCTACCAAGATGTTG i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204135888 678 + 204313951 aaaaatac-----------aaaattaga-------------gcaagcccgtaatcccagctactctggagact--------------------------gaggcggaggttgtagtgagccgagatcgcgccattgtactcca-gcctgggcaacgacagcgaaactccatctc--------------aaaaaaaaaaaaagcaaaaCACAATTCAGGTGAGAAGCACAGTGTGCGGCGTTCTCCGTCGTCTCTTCCGTCCT-CGAAAGCTTCCCTC---TGGGTTTAACCTGTgcccc-gcgcggggcagcagcgcggcccccgcc--------cccgTGCAGCTGGAAACAC-TcggcgccccccggccgggcccTT-------CT--GGTGGTCGCGCAGCCCAGCCTCCCTCCTGAGAGGGAGGAGCACTGCCTTGGTGCTGGGCGCAGTTCTACAGTGGAGCCCGGAGTGCTTGTAGCCGAAACCTACAAATCCCCGGAATTGGGAAGTGCCGGCTTCGGTCGGGCAACTGCGATCCCCGGGTCTTTCCCGTGCGCCCGCGCGCGCTCTCGGCGCGCGTTCCATCTCAGTCCCGTGTCCTGTGTCCCT-GTT-------------CAGGATACTACAATTATTGTCATTATTTCATAGCGTTATTCCAGTTTTTTATGTTCTTCAGTGCCTCCTTCCATGAACGctaacttttttcatcctcagagttcctaaggttttctctgaattttcacccagttgcccacccagatgttg i calJac3.chr2 C 0 I 5724 a score=1365.000000 s hg38.chr3_KI270937v1_alt 161390 1 + 165607 T s panTro4.chr3 201701570 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2482503 1 - 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2923206 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623431 1 + 181584905 T i macFas5.chr6 C 0 C 0 s chlSab2.chr4 1479059 1 + 91010382 T i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204136566 5724 + 204313951 I e papAnu2.chr6 174409966 3205 - 174439528 I a score=33978.000000 s hg38.chr3_KI270937v1_alt 161391 21 + 165607 CTGTGTCTAATGCAGGGGATG s panTro4.chr3 201701571 21 + 202329955 CTGTGTCTAATGCAGGGGACG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2482504 21 - 202140232 CTGTGTCTACTGCAGGGGATG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2923207 20 - 123690457 CTGTGTCTACTGCAGGGG-CG i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623432 21 + 181584905 CTGTGTCTACTGCAGGGGACG i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174413171 21 - 174439528 CCGTGTCTACTGCATGGGACG i papAnu2.chr6 I 3205 C 0 s chlSab2.chr4 1479060 21 + 91010382 CTGTGTCTACTGCAGGGGACG i chlSab2.chr4 C 0 C 0 e calJac3.chr2 204136566 5724 + 204313951 I a score=943525.000000 s hg38.chr3_KI270937v1_alt 161412 435 + 165607 GTGCAGGTCTGAATATCTTACTCACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACATCTTCTCTCTGGGCAGTATTCTACTTTCTTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATACGGGTTCACTTTGAAACCTTGAAACCCACATTTACAAAAACATTTTCAATATGAAACATTGTTCCATGACTC----ATTACTGGAGTACCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGTAGTAGACACACGCACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGCT s panTro4.chr3 201701592 429 + 202329955 GTGCAGGTCTGAATATCTT----ACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACATCTTCTCTCTGGGCAGTATTCTACTTTCTTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCCTGAAACCCACATTTACAAAAACATTTTCAATATGAAGCATTGTTCCATGACTC----TTTACTGGAGCACCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGTGTTCCTAAGCGGTAG--ACACGCACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2482525 427 - 202140232 ATGCTGGTCTGAATATCTt----acagctcacctttttggtgcctttgatctgtgttaggaattatccacatcttctctctgggaaatattcta----ctttttatattgacccaattattttacttcttcggtttgtcctttctcctGACACATAGGGGTTCACTTTGAAACCTTGAAACCCACATTTACAAAAACATTTTCAATATGAAAGATTGTTCCATGACTC----ATTACTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTATTCATGAAAATGGTCTGAAGGTTTGTTTTGGGTTCCTAAGTAGTAGACACACACACA---ACACTGCCTGTCAGTTATTTCTTGGAAACTAAATCAGCCCTTCTGTTGCCAACTTATCATGCTTCAGGGGTGCCTGTGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2923227 430 - 123690457 GTGCAGGTCTGAATATCTTACTCACAGCTCACCTTTTTGGTGCCTTTGAACCGTGTTAGGAATTACCCACATCTTCTCTCTGGGCAATATTCTA----CTTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATACGGGTTCACTTTGAAACCTTGAAACTCACATTTAC-AAAACATTTTCAATATGAAGCATCGTTCCATGACTC----ATTAGTGGAGTTCCATCAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTATTTTGGGTTCCTAAGTAGTAGACACACACACA---ACACTGCCTGTCAGTTATTTCTCGGAAACTAAATCAGCCCTCCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGCT i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623453 430 + 181584905 GTGCAGGTCTGAGTATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCATGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTCTTTTTACATAGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAACGCACATTTAC-AAAACATTTTTGGTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTTCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGCAGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTTGGAAACTAAATCAG-CCTTCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGCT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174413192 433 - 174439528 GTGCGGGTCTGAATATCTTAAACACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGCAATTACCCACATCTTCTCTCTGGGCAATATTctactttcattttatattgaCTCAATTATTTTACCTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAACccacatttac-aaaacattttcggTATGAAACATGGTTCCATGACTC----ATTAGTGGAGTACCATAAACATTTACATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTCGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTTTGGGTTCCTAAGcagtagacacacacaca---acactgcCTGTCAGCTATTTCTCGGAAACTAAATCAG-CCTTCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGct i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1479081 430 + 91010382 GTGCGGGTCTGAATATCTTACACACAGCTCACCTTTTTGGTGCCTTTGATCCGTGTTAGGAATTATCCACA---TGTCTCTGGGCAATATTCTACTTTCTTTTTATATTGACCCAATTATTTTACTTCTTTGGTGTGTCCTTTCTCCTAACACATATGGGTTCACTTTGAAACCTTGAAGCCCACATTTAC-AAAACGTTTTCGGTATGAAACATGGTTCCACGACTC----ATGAGTGGAGTACCATAAACATCTCCATTTCCAGACCACCCACTGCCCAGTGGTTTTCTTGGTCTCAGTACTCATGAAAACGGTCTGAAGGTTTGTTCTGGGTTCCTAAGCAGTAGACACACACACA---ACACTGCCTGTCAGCTATTTCTCGGAAAGTAAATCAG-CCTTCTGTTGCCATCCTATCATGCTTCAGGGGTGCCTGTGCC i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204142290 426 + 204313951 GTGCAGGTCTGAGTATCTCAGACACAGCTCACCTTTTTCCTGCCTTTGATCCGTGTTAGGAATTATCCACGCCTTCTCTCCGGGCAACATTCTACGTTCTTTTTATATTGACCCAATGATTTTACTTCTTTGGTTTGTCCTTTCTCTGAACAAGCATGGGTTCATTTTGAAACCTTGAAACCCACATTTAC-AAAACATTTTCAATATGAAACATCGTTCTATGACTCAGTAATTAGTGGAGCACTATAAAAATTTAC-TTTTCAGACCACCCACTGCCCAGTGGCTTCCTTGGTCTCAGTACTCATGAGAACTGTCTGAGGGTTTGTTTCTGATTCCT---TAGTAGACATACACACAAGGAAGCTGCCCAGCAGTTATTC-----------GATTGGCCCTTCCGTTGCCACCCTATCATACTTCAGGGGTGCCTGTGCT i calJac3.chr2 I 5724 I 294 a score=494942.000000 s hg38.chr3_KI270937v1_alt 161847 234 + 165607 AGTTTTTAATTCTTTGTTCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGCCTGAGGTTG-----------CCACCTGTTATTTTTCCTTCATTTATTGGACCATGTCATCCCATTACATGTCAGCCGTGGAGGTTTTCAAACTGTGGTCcctggacatgttaaaaatgcaaattctcaggccgaa s panTro4.chr3 201702021 234 + 202329955 AGTTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACGCCCATATTAATACTTCCTCTGAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGCCTGAGGTTC-----------CCACCTGCTACTTTTCCTTCATTTATTGGACCATGTCATTCCATTACATGTCAGCCGTGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaacgcaaattctcaggccgaa i panTro4.chr3 C 0 I 286 s ponAbe2.chr3 2482952 233 - 202140232 AATTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAATGCCCACATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTAATGGTTGGGATGAAGCTGCCTGAGGTTG-----------CCACCTGTTATTTTTCC-TCATTTATTGGACTATGTCATCCCATTACATGTCTGCCATGGAGGTTTTCAAGCTGTGGTCcctggacacgttagaaatgcaaattctcaggccgaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2923657 232 - 123690457 AGTTTTTAATTCTTTGTCCTAACAC--AAATATTTGCTCAAACGCCTGTATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGCCTGAGGTTG-----------CCACCTGTTATTTTTCCTTCATTTATTGGACCATGTCATCCCATTACATGTCTGCCATGGAGGTTTTCAAGCTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1623883 220 + 181584905 AGTTTTTAATTCTTTGTCCCGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTG-----------CCACCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174413625 220 - 174439528 agtttttaattctttgtcCTGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGATGAAGCTGTCTGAGGTTG-----------CCACCTGTtattattccttcatttattgGACCATGTC-TGCCAT-------------TGGAGGTTTTAAAACTGTGGTCCCTGGacatgttagaaatgcaaattctcaggccgaT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1479511 220 + 91010382 AGTTTTTAATTCTTTGTCCTGACACTTAAATGTCTGCTCAAACGTCCATATTAATACTTCCTCTTAGTTTACAAAA-------GGATTTACTTTCTTACTGGTTGGGAGGAAGCTGTCTGAGGTTG-----------CCACCTGTTATTATTCCTTCATTTATTGGACCATGTC-TGCCAT-------------TGGAGGTTTTCAAACTGTGGTCcctggacatgttagaaatgcaaattctcaggccgaa i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204143010 251 + 204313951 AGCTTTTAATTCTTTGTCCTAACACTTAAATGTTTGCTCAAACACCCGTGTTAATAC-TACTCTTAGTTTTCAGAAGGCTTGGGGATTTACTTTCTTACTGGCTGGGATGAAGCTTCCTGAGGTTGCCAGGGGGTCTCCACCTGTTGTTGTTCCCCCGTTTATCGGACCGTGTCATCCCATTACATGTCTGCCACAGAGGTTTCCAAACTGTGGTCcctgggcatgttagaaatgccaattctcaggcctaa i calJac3.chr2 I 294 C 0 a score=86874.000000 s hg38.chr3_KI270937v1_alt 162081 39 + 165607 ccaggactgaattggaagatctggggtagggtccCCCCA s panTro4.chr3 201702541 39 + 202329955 CCAGGACTGAATTGGAAGATCTGGGGTAGGGTCCCCCCA i panTro4.chr3 I 286 C 0 s ponAbe2.chr3 2483185 39 - 202140232 ccaggactgaataggaagatctggggtagggtccCTCCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2923889 39 - 123690457 ccaggactgaataggaagatctggggtagggtccCCCCA i nomLeu3.chr11 C 0 C 0 s macFas5.chr6 1624103 39 + 181584905 tcaggactgaatcagaagatctggggtagggtccCCCCA i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174413845 39 - 174439528 TCAGGACTGAATCAGAAGGTCTGGGGTGGGGTCCCCCGA i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1479731 39 + 91010382 tcaggactgaatcagaagatctggggtagggtccCCCCA i chlSab2.chr4 C 0 C 0 s calJac3.chr2 204143261 37 + 204313951 ccaggactga--tggaagttctggggtagggtccCTCCA i calJac3.chr2 C 0 N 0 a score=31243.000000 s hg38.chr3_KI270937v1_alt 162120 17 + 165607 GGACTGAATCAGAAGAT s panTro4.chr3 201702580 17 + 202329955 GGACTGAATCGGAAGAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2483224 17 - 202140232 GGACTGAATCGGAAGAT i ponAbe2.chr3 C 0 I 7370 s nomLeu3.chr11 2923928 17 - 123690457 GGACTGAATCAGAAGAT i nomLeu3.chr11 C 0 I 8217 s macFas5.chr6 1624142 17 + 181584905 GGACTGAATCGGAAGGT i macFas5.chr6 C 0 C 0 s papAnu2.chr6 174413884 17 - 174439528 GGACTGAATCGGAAGGT i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1479770 17 + 91010382 GGACTGAATCGGAAGGT i chlSab2.chr4 C 0 C 0 a score=10311.000000 s hg38.chr3_KI270937v1_alt 162137 5 + 165607 CTGGG s panTro4.chr3 201702597 5 + 202329955 CTGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2490611 5 - 202140232 CTGGG i ponAbe2.chr3 I 7370 C 0 s nomLeu3.chr11 2932162 5 - 123690457 CTGGG i nomLeu3.chr11 I 8217 C 0 s macFas5.chr6 1624159 5 + 181584905 CTGGG i macFas5.chr6 C 0 N 0 s papAnu2.chr6 174413901 5 - 174439528 CTGGG i papAnu2.chr6 C 0 C 0 s chlSab2.chr4 1479787 5 + 91010382 CTGGG i chlSab2.chr4 C 0 N 0 a score=3054.000000 s hg38.chr3_KI270937v1_alt 162142 4 + 165607 AGGG s panTro4.chr3 201702602 4 + 202329955 AGGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2490616 4 - 202140232 AGGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2932167 4 - 123690457 AGGG i nomLeu3.chr11 C 0 C 0 s papAnu2.chr6 174413906 4 - 174439528 ATGG i papAnu2.chr6 C 0 N 0 a score=65565.000000 s hg38.chr3_KI270937v1_alt 162146 136 + 165607 TCTGGTGCTGTGCACCCCGACATTCCCTCACTACCCCACTGCCTCTCCCTGCCCTGTGGTCACCACAGCAGCCGCCTCTGCAACCTTGACTATCAGCATGCAGGTCCCAGGACTCGGGGGTCTCCTAACCCGTGCA s panTro4.chr3 201702606 136 + 202329955 TCTGGTGCTGTGCACCCCGACATCCCCTCACTACCCCACCGCCTCTCCCTGCCCTGTGGTCACCACAGCAGCCGCCTCTGCAACCTTGACCATCAGCATGCAGGTCCCAGGGCTCGGGGGTCTCCTAACCCGTGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2490620 136 - 202140232 TCTGGTGCCATGCACCCCGACATCCCCTCACTACCCCACCACCTCTCCCTGCCCTGTGGTCACCACAGCCACCGCCTGTGCAACCTTGACCACCAGAGCGCAGGTCCCAGGGCTCAGGGGTCTCCCAACCCGTGCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2932171 127 - 123690457 TCTGGCGCTCTGCACCCTGACATCCCCTCACTACCCCACCTCCTCTCCCTGCCCTGTGGTCGCCACAGCA---------GCAACCTTGACCATCAGCATGCAGGTCCCAGGGCTCGGGGGTCTCCCAACCCGTGCA i nomLeu3.chr11 C 0 C 0 a score=31061.000000 s hg38.chr3_KI270937v1_alt 162282 133 + 165607 CCCCGACATCCCCCTCACTACCCCACCGCCTCTCCCTGGCTCTGCCTCTGCGTGGCTCCTCTCCTGCTGCCCCCAGAAGGTTTTTGTAAAGCCCGACTCAGGGCGTGCATGGCCTCTCCCTCTCCC------------------ACACATG s panTro4.chr3 201702742 133 + 202329955 CCCCGACATCCCCCTCACTACCCCACCGCCTCTCCCTGGCTCTGCCTCTGCGTGGCTCCTCTCCTGCTGCCACCAGAAGGTTTTTGTAAAGCCCGACTCAGGGTGTGCATAGCCTCTCCCTCTCCC------------------ACACATG i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 2932298 150 - 123690457 CGCCAACAT-CCCCTCACTACCCCACCGCCTCTCCCTGGCTCTGCCTCTGTGTGTCTCCTCTCCTACTGCTGCCAGAAGGTTTTTGTAAAGCCGGACTCAGGGCGTGCATGGCCTCTCCCGTTCCCGCGAGGTGCCCGCGTTTGGCACGTG i nomLeu3.chr11 C 0 C 0 e ponAbe2.chr3 2490756 0 - 202140232 C a score=408909.000000 s hg38.chr3_KI270937v1_alt 162415 783 + 165607 GGCTCCCCGTCCCCTCCAGCTCAGCAAACACACAGCACATCCAGGAGCCACGTGGGACCGCAGTGTCCCATGGCCGGTCCCCCAGATCCCTTGGATGTCTCACTCTGGTGAGCCCCTCGCTCCAGTGCCCTCCAGGAAGCCCCCGTCTCCCCATACAGAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCCCGACCCTCCCTCTCCTCTGTCGCCCCATTTGT-GGCAGGTCAGCCACACCCGTGAGCCCCGGAGCTCTGTGAAGGCCGTCACGGCTCCTTATGACGGCGCCCAAACAGTGCAGGCAGCCGGAAGCTG---TTCCCTGATGAAAGAAAGGAAGAGGAAAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCCCGAGAGACTTCTGTAGGAATTTTTGGGTGATACTGAGCATGGTAGACCCAGGTCATCTTTCCACGAGAGGGGCCAGAGTACCGCAGGCTCAGCCGCGGTCAGGGGCTCAGGGCGCCGGGGAAGCATTCGCGTGGGCTGCCCCCACGGGCCGCCTTTGCCACCAAGACCCACTCTTCCAGCCAGGCCTTGGGCCGGCCCTGCTTTCCCTTCGGACAAGGTCTTCAGTCCACCGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCAGGGAGGAGCTGTGTGAACCTGGGAGGTGCTGGGGAGCAAGGGTGCTCCACCAAGGGAGGCAGGAGGCCGGAGACCAGCCCGGCCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGACCCGG s panTro4.chr3 201702875 783 + 202329955 GGCTCCCCGTCCCCTCCAGCTCAGCAAACACACAGCACATCCAGGAGCCACGTGGGACCACAGTGTCCCATGGCCGGTCCCCCAGATCCCTTGGATGTCTCACTCTGGTGAGCCCCTCGCTCCAGCGCGCTCCAGGAAGCCCCCGTCTCCCCATACAGAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCCCGACCCTCCCTCTCCTCTGTCGCCCCATTTGT-GGCAGGTCAGCCACACCCGTGAGCCCCAGAGCTCTGTGAAGGCTGTCACGGCTCCTTAAGATGGCGCCCAAACAGTGCAGGCAGCCGGAAGCTG---TTCCCTGATGAAAGAAAGGAAGAGGAAAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCCCGAGAGACTTCTGTAGGAATTTTTGGGTGATACTGAGCATGGTAGACCCAGGTCATCTTTCCATGAGAGGGGCCAGAGTACTGCAGGCTCAGCCGCGGTCAGGGGCTCAGGGCGCCGGGGAAGCATTCGCGTGGGCTGCCCCCACGGGCCGCCTTTGCCACCAAGACCCACTCTTCCAGCCAGGCCTTGGGCCGGCCCTGCTTTCCCTTCGGACAAGGTCTTCAGTCCACGGAGAGGATGGCCCACCTGCTGCCCCTGGGTCAGTGCGCAGCCCCAGGGAGGAGCTGTGTGAACCTGGGAGGTGCTGGGGAGCAAGGGTGCTCCACCAAGGGAGGCAGGAGGCCGGAGACCAGCCCAGCCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGACCCGG i panTro4.chr3 C 0 I 132 s ponAbe2.chr3 2490756 785 - 202140232 GGCTCCCTGTCCCCTCCAGCTCAGCAAACACACAGCGCATCCAGGAGCCACGTGGGACCACACTGTCCCATGGCCGGTCCGCCAGTTCCCTTGGATGTCTCACCCTGGTGAGCCCCTCGCTCCAGCTCCCTCCAGGAAGCCCCCATCTCCCCATACAGAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCCCGACCCTCCCTCTCCTCTGTCGCCCCATTTGT-GGCAGGTCAGCCACACCCGTGAGCCCCGGAGCTCTGCGAAGGCCGTCACGGCTTCTTATGACGGTGCCCAAACAGTGCAGGCGGCTGGAAGCTGTTTTTCCCTGATGAAAGAAA-GAAGAGGAAAGGAAGAGGGAGGGAAGAAGGCCTTTTCTTGTCCCAAGAGACTTCTGTAGGAATTTTTGGGTGATACTGAGCCTGGTAGACCCAGGTCATCTTTCCATGAGAGGAGCCAGAGTACAGCAGGCTCAGCCACGGTCCGGGGCTCAGGGCCCCAGGGAAGCATTTGCATGGGCTGCCCTCACGAGCCGCCTTTGCCACCAAGACCGGCTCTTCCAGCCAGGCCTTGGGCCGGCCCTGCTTTCCCTTCGGACAAGGTCTTCAGTCCATGGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCAGGGAGGAGCTGTGTGAACCTGGGAGGTGCTGGGGAGCAAGGGTGCTCCACCAAGGAAGGCAGGAGGCCAGAGACCTGCCCAGCCCAGGAGGAGCCTGGCCAGGAGTCCCACCAAAGCCACTGGACCCGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2932448 777 - 123690457 GGCTCCCCGTCTCCTCCAGCTCAGCAA--ACACAGCGCGTCCAGGAGCCACGTGGGACCACCGTGTCCCATGGCTGGTCCCCCAGGT-CCTTGGATGTCTCACCCTGGTGAGCCCCTTGCTCCGGCTCCCTCCAGGAAGCCCCCGTCTCCCCATACAGAAGGGATCTCTTCCCTCCTGAGCCATCGGTGCCCGACCCTCCCTCTCCTCTGTCGCCTCATTTGTGGGCAGGTCAGCTGCACCCGTGAGCCCTGGAGCTCTGTGAAGGCCGTCACGGCTTCTTATGACAGTGCCCAAACAGTGCAGGCAGCCGG-AGCTG---TTCCCTGATGAAAGAAAGGAAGAGGAAAGGAGGAGGGAGGGAAGAAGGCCTTTTCTTGTCCCAAGAGACTTCTGTAGGAATTTCTGGGTGATACTGAGCATGGTAGACCCAGGTCATCTTTCCATGAGAGGAGC--AAGCACAGCGGGCTCAGCCGCGGTCAGGGGCTCAGGGAGCC-GGGAAGCATTTGCGTGGGCTGCCCCCACGAGCCGCCTTTGCCACCAAGACCGGCTCTCCCAGCCAGGCCTTGGGCCAGCCCTGCTTTCCCTTCGGACAAGGTCTTCAGTCCACGGAGAGGATGGCCCACCTCCTGCCCCTGGGTCAGTGCGCAGCCCCAGGGAGGAGCTGTGTGAACCTGGGAGGTGCTGGGGAGCAAGCGTGCTCCATCAAGGAAGGCAGGAGGCCGGAGACCTGCCCAGCCCGGAAGGAGCCTGGTCAGGAGTCCCACCAAAGCCACTAGACCCGG i nomLeu3.chr11 C 0 C 0 a score=423075.000000 s hg38.chr3_KI270937v1_alt 163198 836 + 165607 GGAGCCTCCAGTGACCCAGCCTTGTAGGGTCAGCACTGTCCCTAGGACAGAGTCTGCTTCGTACACAGGTCTCGCTGTCTGTGGAGGCTTCAGGCCCCGATGCCTGGGCA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCCGGGGTGGCG-GGGGGGCGGGTG--GGAGAGGACGGAGCGTCTGTGTGCATGTGTGAGAGCCTCAAGGACGGCATGTCTGTGAAGATGGCTTCACCCAGCCGCGGCTGCCTTCCGTGTGTGGGCAGCGGTGACGGAGCCGTGACCTCACGGGACAGCCTTTGCCGTGTGGTTTTCCCGCCTCTGGTCCCTTTCCTGGGCTGAGGATCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCGGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCCTGTCCTCCAGCATGGTTCCTAGACCCACCACGCAGGACTCCTAGGCCCCTGAGGGTTGGCAGGAGTGAGGCAGGCAGTCACCAACTGCCCTTGGGTGAGGCTGGTGGCCAGGGGGGGACCCAGCAGGTGCAAGCCAGGCCATCCCCAGCAGCCGCCGGAGCCCATGTCTTTCCCACCGCACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTACGCTTCTAGTCCTTACATCACCCACAACTTACCCCTGACCTGTGCCTGGCTGTGGTGCCCGCAGCCTGGGCTCCACATAAACACAGGCCAAGAAGTCCCATCTGCAGCCTCCCACCGCAAAGGTTTCCGGCAGTCCGGGCTCCCCAGGCACCGGCTCTGCAGCCCCCAC s panTro4.chr3 201703790 838 + 202329955 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGACAGAGTCTGCTTCGCACACAGGTCTCGCTGTCTGTGGAGGCTGCAGGCCCCGATGCCTGGGCA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCCGGGGTGGCG-GGGGGGCGGGTGTGGGAGAGGACGGAGCGTCTGTGTGCATGTGTGAGAGCCTCAAGGACGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCGGCTGCCTTCCGTGTGTGGGCAGCAGTGACGGAGCCGTGACCTCATGGGACAGCCTTTGCCGTGTGGTTTTCCCGCCTCTGATCCCTTTCCTGGGCTGAGGAGCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCAGCTCCTGCCATAGATATCCTGGTGGCCCTGGCACAGGCCTGTCCTCCAGCATGGTTCCTAGACCCACCACGCAGGACTCCTAGGCCCCTGAGGGTTGGCAGTAGTGAGGCAGGCAGTCACCAACTGCCCTTGGGTGAGGCTGGTGGCCAGGGGGGGACCCAGCAGGTGCAAGCCAGGCCATCCCCAGCAGCCGCCGGAGCCCATGTCTTTCCCACTGCACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTACACTTCTAGTCCTTACATCACCCACAACTTACCCCTAACCTGTGCCTGGCTGTGGTGCCCGCAGCCTGGGCTCCACATAAGCACAGGCCAGGAAGTCCCATCTGCAGCCTCCCACCCCAAAGGTTTCCGGCAGTCCGGGCTCCCCAGGCACCGGCCCTGCAGCCCCCAC i panTro4.chr3 I 132 I 480 s ponAbe2.chr3 2491541 831 - 202140232 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGATGGATTCTGCTTCACACACAGGTCTCGCTGTCTGTGGAGGCTGCAGACCCCGATGCCTGGACA-CACGGACTGACGGCAACCCTCGGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCTGCCTGGGGTGGTG-GGGGGGTG------GGAGAGGACAGAGTGTCTGTGCGCACGTGTGAGAGCCTCAAGGATGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCGGCTGCTTTCTGTGTGTGGGCAGTGGTGGTGGAGCCATGACTGCACGGGACAGCCTTTGCCATGTGGTGTTCCCACCTCTGATCCCTTTCCTGGGCTGAGGAGCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCACCAGCACCAGCTCCTGCCATAGATATCCTGGTGGCCCTGGCACAGGCACATCCTCCAGCATGGTTCCTAGACCCCCCACGTGGGAC-CCTAGGCCCCTGAGAGTCAGCAGGAGTGAGGCAGGCAGTCACAAACTGCCCTTGGGTGAGCCTGGTGACCAGGGGTGGACCCAGCAGGTGCAGGCCGGGCCACCCCCAGCATCTGCCCGAGCCCATGTCTTTCCCACCGCACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTGAGCTTCTAGTCCCTACATCACCCACAACTCACCGCTAACCTGTGCCTGGCTGTGGCACCTGCAGCCTGGGCTCCACATAAACACAGGCCAGGAAGTCCCATCTGGAGCCTCCCACCCCAAAGGTTTCCGGCAGTCCGGGCTCCCCAGGCACCGGCCCTGTAGCCCCCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2933225 832 - 123690457 GGAGCCTCCAGTGACCCAGCCTTGGAGGGTCAGCACTGTCCCTAGGATGGATTCTGCTTCGCACACAGGTCTCGCTGTCTGTGGAGGCTGCAGGCCCCGATGCCTGGGCAGCACGGACTGAAGGCAACCCTCAGGGTGGGAGGCCCCAGATGGGACTTCCTGGCCCTCCCGGGGTGGGGTTGGGGGTG------GGAGAGGACGGAGCGTCTGTGCACATGCGTGAGAGCCACAAGGATGGCATGTCTGTGAAGATGGCTTCTCCCAGCCGCGGC-GCCTTCCGTGTGTGGGCAGTGGTGGTGGAGCCAGGACTGCACGGGACAGCCTTTGCCATGTGGTTTTCCCGCCTCTGATCCC-TTCTTAGGCTGAGGAGCCTGGCTCTGGGGCTCAAGGTGTGGGGTTCGCCAGCACCGGCTCCTGCCATAGACATCCTGGTGGCCCTGGCACAGGCACGTCCTCCAGCATGGTTCCTAGACCCCTCACGCGGGACCCCTAGGCCCCTGAGGGTCAGCAGGAGTGAGGCAGGCCGTCACCAACTGCCCTTGGGTGAGCCTGGTGGCCAGGGGTGGACCCAGCAGGTGCAGGCCAGGCCACCCTCAGCAGCCACCGGAGCCTGTGTCTTTCCCACCACACAGCACAGCCAGGACATGGGGGTCAGGCCATTACTTGTGCTTCTAGTCCCTACATCACCCACAACTCACCCCTAACCTGTGCCTGGCTGTGGCACCTGCAGCCTGGGCTCCACATAAACACAGGCCAGGAAGTCCCATCTGGAGCCTCCCACCCTGAAGGTTTCTGGCAGTCCCGGCTCCCCAGGCACCAGCCCTACAGCACGCAC i nomLeu3.chr11 C 0 C 0 a score=12276.000000 s hg38.chr3_KI270937v1_alt 164034 25 + 165607 AGACAGAGAGACCCCTGTGTGAAGT s panTro4.chr3 201705108 25 + 202329955 AGACAGGGAGACCTGTGTGTGAAGT i panTro4.chr3 I 480 C 0 s ponAbe2.chr3 2492372 25 - 202140232 AGACTGGGAGACCTGTGTGTGAAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr11 2934057 25 - 123690457 AGACAGGGAGACCTGTGTGTGAAGT i nomLeu3.chr11 C 0 C 0 a score=1855.000000 s hg38.chr3_KI270937v1_alt 164059 19 + 165607 CCGGGCTCCTCAGGCACTG s panTro4.chr3 201705133 19 + 202329955 CCGGGCTCCTCAGGCACTG i panTro4.chr3 C 0 C 0 e ponAbe2.chr3 2492397 0 - 202140232 C e nomLeu3.chr11 2934082 0 - 123690457 C a score=9394.000000 s hg38.chr3_KI270937v1_alt 164078 38 + 165607 GCCCTGCAGCCCCCACAGACAGAGAGACCTGTGTGTGA s panTro4.chr3 201705152 38 + 202329955 GCCCTGCAGCCCCCATAGACAGAGAGACCTGTGTGTGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr11 120757136 38 + 123690457 GGCCTGCAGCCTCCACAGACAGCGAGACCTGTGTGCGA i nomLeu3.chr11 n 0 n 0 e ponAbe2.chr3 2492397 0 - 202140232 C a score=743285.000000 s hg38.chr3_KI270937v1_alt 164116 1481 + 165607 AGAATCCGTTTGAGGGA--------CAGTGCTGACCCTCCAGGGCTGGGTCAC-GGAGGCTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGA----------------------CTGGGCCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGATCCTTGCTCCCCAGCTTCCCTGGGAAATCCGACGCCTTCTGAT-CCTGCATGCATCCGGCACCCCTGACGCTGGCGGAGTTGCCTTTCTGCGTGTATAGCTCCTAACAGGGCAGCACAGCTGTTCTGAAACCTCACACATCATCACTGGGGTGGCTGAGGCTGGGCCACCTggtgttcacctcctgaccctggaactgtgcagagaacctctcttcaaataggaggcaggtctttgtggctgtgtttaagttaaagatcttgagataaggaggtcattctggattaactcgttggccctacat-----------------------------------------------------------------gcacggcaagtgtccttacacagaggcagagggaggttagacgcagacagaggaggaggtcgcctggagaccgaggcagaggtgcagcattgtggccgcggcccagggacgcctggagccacagaagctggtggaggtggcagggtcctcccctggagcctctggagggagcacggcccatggactc---gatttcagacccctccctgctgagcggggagagaatgagtccctgttgttttgagctgccgagactgtggggatctgccatggcagctccaggaCCCTCAGACCTTCGGCTCAGAGCCCCTCTAGCACTGAGCAAGACGACCACTCAGGGCCGCCCCTCCCCGCCCAGCCAGCATGTGCCTCGCTGCTCACCCGACCACGCAGCCCTCAGTTACAGATGCCTGCCCGGGATACGTGGGACGAGGGCTGCGGCTTCCCTGGGGACGGGGTGCGTGGAGCCTGCCTGCAGCCGTGTTCCTGTTTACGTGCTGAGTGAAGCTGGACCTGGGTGGGATGGGGCATTCTGCCCAAGGGTCTCTTGGGGGGTCCATGAGGACTGTGTTCTGACGATACTGCCCTCCTTCCTGAGGCTG-CCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGATGGAAGAACACCTAGGCTGGGCTCCTGGGACCCCAGCAGCAGCTGAAGGCACTTGG----AGCACCACAATTCCCACCCACGGGCCAGGCAAGCCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACACGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTT-AACATTTTTTCATTTTTTTCTGTCACTCAATATTTTTAAAATTATATGTCCA-TTTTTTTTATTATTT-CACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCGGTGTTCACAAAGCATTTAAGATGCCTGTGAAATGTAATAAGAACTAACTGCAGCTGCACAATATTCCCTCGTATGTATGTTATCACCATGCTGACGCTGGGCACTCAGAGCATTTAAAGGTTTT--- s panTro4.chr3 201705190 1481 + 202329955 AGAATCCGTTTGAGGGA--------CAGTGCTGACCCTCCAGGGCTGGGTCAC-GGAGGCTCCCGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTCCTGGA----------------------CTGGGCCTGGGCTGGTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGATCCTTGCTCCCCAGCTTCCCTGGGAAATCCGACACCTTCTGAT-CCTGCATGCATCCCGCACCCCTGACGCTGGCGGAGTTGCCTTTCTGCGTGTATAGCTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCACACGTCCTCACTGGGGTGGCTGAGGCTGGGCCACCTggtgttcacctcctgaccctgcaactgtgcagagaacctctcttcaaataggaggcaggtctttgtggctgtgtttaagttaaagatcttgagataaggaggtcattctggatgaac-cgttggccctacat-----------------------------------------------------------------gcacggcaagtgtccttacacagaggcagagggaggttaggcgcagacagaggaggaggccgcctggagaccgaggcagaggtgcagcagtgcggccgcggcccagggacgcctggagccacagaagctggtggaggtggcagggtcctcccctggagcctctggagggagcacggcccgtggactc---gatttcagacccctccctgctgagcggggagagaatgagtccctgttgttttgagctgcccagactgtggggatctgccatggcagctccaggaCCCTCAGACCTCCGGCTCAGAGCCCCTCCAGCACTGAGCAAGACGACCACTCAGGGCTGCCCCTCCCCGCCCAGCCAGCATGTGCCTCGCTGCTCACCCGACCACGCAGCCCTCAGTTACAGATGCCTGCCCAGGATACGTGGGACGGGGGCTGCGGCTTCCCTGGGGATGGGGTGCGTGGAGCCTGCCTGCAGCCGTGTTCCTGTTTAGGTGCTGAGTGAAGCTGGACCTGGGTGGGATGGGGCATTCTGCCCAAGGGTCTCTTGGGGGGTCCATGAGGACTGTGTTCTGACGATACTGCCTTCCTTCCTGAGGCTG-CCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGACGGAAGAACACCTAGGCTGGGCTCCTGGGACCCCAGCAGCAGCTGAAGGCACTTGG----AGCACCACAATTCCCACCCACGGGCCAGGCAAGGCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACACGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTT-AACATTTTTTCATTTTTTTCTGTCACTCAATATTTTTAAAATTATATGTCCATTTTTTTTTATTATTT-CACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCGGTGTTCACAAAGCATTTAAGATGCCTGTGAAATGTAATAAGAACTAACTGCAgctgcacaatattccttcgtatgtatgttatcaccatgctgatgctgggcactcagagcatttaaaggtttt--- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 2492397 1569 - 202140232 GGAATCCATTTGATGGATGGTCAGGCTGTGCTGACCCTCCAGGGCTGGGTCACTGGAGGCTCCAGTGGCTTTGATGGGACTCCTGGCCAGGCTTCTcctgga-----------ctgggcctgggctgggcctgggctggTCTCCGGCCTCCTGCCTCCCTTGGTGCAGGGCCCTTGCTCCCCAGCTTCCCTGGGAAATCTGATGCCATCTGAT-CCCGCACGCATCCAGCACCCCTGACGCCAGCGGAGTTGCCTTTCTTCGTATATAACTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCGCACGTCCTCACTGGGGTGGCTAAGGCTGGGCCACTGggtgttcacctcctgaccctggaactgtgcacagaacctctcttcagataggaggcgtgtctttgtggccatgattaagtgaaagagcttgagataaggaggtcattctggattaacccgttggccctaaatgcatggcaagtgtccttacacagaggataaggaggtcattctggattaacccattggccctaaacgcatggcaagtgtccttacacagaggcagagggaggttagatgcagacagaggaggaggcctcctggagactgaggcagaggtgcagcaatgcagccgcggcccagggatgcctggagccacagaagctggcggaggtgggagggtcctcccctggagcctctggagggagcacggcccatggactccttgatttcagacccctccctgctgagcggggagagaatgagcccctgttgtttcgagttgcccaggctgtggggatctgccatggcagttccaggaCCCTCGGACCCTCGGCTCAGAGCCCCTCCAGCACTGAGCAAGAAGACCACTCAGGGCCGCCCCTCCCCGCCCAGCTGGCATGTGCCTTGCTGCTCACCCGACCACACTGCCCTCAGTTACAGATGCCTGCCCGGGATGCGTGGGACGGGGGCTGCGGCTTCCCTGGGGATGGGGTGCGTGGAGCCTGCCTGCGGCCATGCTCCTGTTTAGGTGCCGAGTGAAGCTGGACGTGGGTGGGATGGGGCATTCTGTCCAAGGGTCTCTT-GGGGGTCCACGAGGACTCTGTTCTGATGATACTGCCCTCCTTCCTGAGGCTGCCCGTGGGGCTCCACGGAGGCCATGGGGTGATGAGGACAGAAGAACACCTAGGCTGGGCTCCTGGGACCCCAGCAGCAGCTGAAGGCACTTGGAGCAAGCACCACAATTCCCACCCACGGGCCAGGCAAGGCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACAGGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTTAAACATTTTTTCATTTTTTTCTGTCACTCAGTATTTTTTAAATTACATGTCCA------TTTATTATTT-TGCCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCAGTGTTCACAAAGCATTTAAGATGCCTATGAAATGTAATAAGAACTAACTGCAgccgcacaatattccctcgtatgcacgttaccatcatgctgacgctgggcacgcagagtatttacaggtttt--- i ponAbe2.chr3 C 0 N 0 s nomLeu3.chr11 2934082 1492 - 123690457 GGAATCCGTTTGAGGGA--------CAGTGCTGACCCTCCAGGGCTGGGTCACTGGAGGCTCCAGTGGCTTTGGTGGGACTCCTGGCCAGGCTCCTcctgggctgggcctgggctgggcctgggctgggcctgggctggTCTCTGGCCTCCTGCCTCCCTTGATGCAGGACCCTTGCTCCCCAGCTTCCCTGGGAAATCCAACGCCATCTGATCCCCGCACGCATCCAGCACCCCTGATGCTGGCGGAGTTGCCTTTCTGCGTGTATAACTCCTAACAGGGCAGCACAGCCGTTCTGAAACCTCGCACGTCCTCACTGGGGCGGCTGAGGCtgggccaccaggtgttcacctcctgaccctggaaccatgcacagaacctctcttcaaataggaggcaggtctttgtggctgtgattaagttaaagatcttgagataaggaggtcattctggattaacccgttggccctaaat-----------------------------------------------------------------gcatggcaagtgtccttacacagaggcagagggaggttagacgcagacagagcag-----------------aaggcagaggtgcagcaatgcggctgcggcccagggacgcctggagccacagaagctggcggaggtgggagggtcctcccctgaagcctctggagggagcacagcccgtggactccttgatttcagacccctccctgctgagtggggagagaatgagcccctgctgtttcgagctgcccaggctgtggggatctgccatggcagttccaggaCCCTCGGACCTTCGGCTCGGAACCCCTCCAGCACTGAGCAAGATGACTGCTCAGGGCCACCCCTCCCCGCCCAGCCAGCGTGTACCTCGCTGCTCACCCGACCACGCTGCCCTCAGTTACAGATGCCTGCCCGGGATACATGGGACAGGGGCTGCGGCTTCCCTGGGGATGGGGTGCGTGGAGCCTGCCTGCAGCCGTGCTCCTGTTTAGGTGCTGAGTGAAGCTGGACCTGGGTGGGATGGGGCATTCTGTCCAAGGGTTTCTT--GGGGTCCACGAGGACTCTGTTCTGACGATACTGCCCTCCTTCCTGAGGCTGCCCGTGGGGCTCCATGGAGGCCATGGGGTGGTGAGGACGGAAGAACACCTAGGCTGGGCTCCTGGGA-CCCAGCAGCAGCTGAAGGCACTTGA----AGCACCATAATTCCCACCCACGGGCCAGGCAAGGCCAGAACCGTCCCCAAAGAAGGGAGCAAGGAGACAGGGCCTTTTAGTGATAATATCATAACCAAAAAGTTCTTT-AACATTTTTTCCTTTTTTTCTGTCACTCAATATTTTTAAAATTATATGTCCA--TTTTTTAATTACTTGCACCCATCTAATCATTGCCATCTATACCAAACAAAAAAATCTATGCACCGGTGTTCACAAAGCATTTAAGATGCCTATGAAATGTAATAAGAACTAACTGAAgctgcacaatattccctcatatgtacattatcaccatgctgatgctgggcactcagagtatttacaggttttctt i nomLeu3.chr11 C 0 C 0 a score=2757.000000 s hg38.chr3_KI270937v1_alt 165597 10 + 165607 TATTATAATG s panTro4.chr3 201706671 10 + 202329955 tattataatg i panTro4.chr3 C 0 N 0 s nomLeu3.chr11 2935574 10 - 123690457 tattataatg i nomLeu3.chr11 C 0 N 0