##maf version=1 scoring=roast.v3.3 a score=1803631.000000 s hg38.chr4_KI270785v1_alt 0 468 + 119912 TTTTCATGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAATTTCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATATTGGAAGCAGCTCAGTGTAGAGCCATGGCTAAAATAGTTGGAAATTATATCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTGTAAAGTACTATGG------ATCACTGAGAAAGTGTGTATTCATTTTTGTCTAA--TGATGAA-ATGATCCAGCTGCAGGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGCCTTTCATTTTACAATTCACATGGAAAGAAATGTGATGAGACCCTGAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-GC--TA-TATTACATTGCACTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT s panTro4.chr4 190272497 468 + 193495092 TTTTCATGATGCCTGTCAC-------ATTCTAAAATGGAATGCAGTTAATTTCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTGTTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATATTGGAAGCAGCTCAGTGTAGAGCCATGGCTAAAATAGTCAGAAATTATATCCATAGG--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTGTAAAGTACTATGG------ATCACCGAGAAAGTGTGTATTCATTTTTGTCTAA--TGATGAA-ATGATCCAGCTGCAGGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGCCTTTCATTTTACAATTCACGTGGAAAGAGATGTGATGAGACCCTGAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-GC--TA-TATTACATTGCACTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i panTro4.chr4 N 0 C 0 s ponAbe2.chr4 195238115 477 + 198332218 TTTTCATGATGCCTGTCACATTCTGAATTCTGAAATGGAATGCAGTTAATTTCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTGTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATATTGGAAGCAGCTCAGTGTAGAGCCATGACTAAAATAGTCAGAAATTATATCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTGTAAAGTACTATGG------ATCACTGAGAAAGTGTGTATTCATTATTGTCTAA--TGATGAA-ATGATCCAGCTGCAGGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGCCTTTCATTTTACAATTCACATGGAAAGAGATGTGATGAGACCCTGAAAGACAGCTCTGGCTTCATCTGGACCGCGATTTAGTTAAT-GCTATA-TATTACGTTGCGCTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i ponAbe2.chr4 N 0 C 0 s nomLeu3.chr7b 111210517 468 + 115148730 TTTTCCTGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAATTTCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTCTGAGTT--------AGAAATAGCTCTGATTAAGTGCTATATTGGAAGCAGCTCAGTGTAGAGCCATGGCTGAAATAGTAAGAAATTATATCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTGTAAAGTACTATGG------ATCACTGAGAAAATGTGTATTCGTTATTGTCTAA--TGATGAA-ATGACCCAGCTGCAGGAAGAGTCCACAGAGGACGTGCCCAGGCAAA-GGCCTTTCATTTTACAATTCACATGGAAAGAGATGTGAGGAGACCCTGAAAGACAGCTCTGGTTTCTTCTGGACCACAGTTTAGTTAAT-GC--TC-TATTACATTGCGCTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i nomLeu3.chr7b N 0 C 0 s rheMac3.chr5 181013132 468 + 184069350 TTTTCATGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAATTCCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATACTGGAAGCAGCTCAGTGTAGAGCCTTGACTAAAATTGTCAGAAATTATATCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTATAAAGTACTATGG------ATCACTGAGAAAATATGTATTCATTATTGTCTAA--TGATGAA-ATGATCCAGCTGCACGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGTCTTTCATTTTACAATTCACATGGAAAGAGATGTGATGAGACCCTAAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-AC--TG-TATTATATTGCTCTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i rheMac3.chr5 N 0 C 0 s macFas5.chr5 186350599 468 + 189454096 TTTTCATGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAATTCCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATACTGGAAGCAGCTCAGTGTAGAGCCTTGACTAAAATTGTCAGAAATTATATCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGCAACAACAACTATAAAGTACTATGG------ATCACTGAGAAAATATGTATTCATTATTGTCTAA--TGATGAA-ATGATCCAGCTGCACGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGTCTTTCATTTTACAATTCACATGGAAAGAGATGTGATGAGACCCTAAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-AC--TG-TATTATATTGCTCTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i macFas5.chr5 N 0 C 0 s papAnu2.chr5 175966054 468 + 178775436 TTTTCATGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAattcctctccttcctcagctcg-gtaagtttattttcttagaatCTATTCTGTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATACTGGAAGCAGCTCAGTGTAGAGCCTTGACTAAAATAGTCAGAAATTATATCCATAGA--AAATTCAAATCTGAGaatt-----------------aaaagcaacaacaacTATAAAGTACTATGG------ATCACTGAGAAAATGTGTATTCATTATTGTCTAA--TGATGAA-ATGATCCAGCTGCACGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGTCTTTCATTTTACAATTCACATGGAAAGAGATGTGATGAGACCCTAAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-AC--TG-TATTATATTGCTCTTTGTagtgaaatgcaaaaataaaaggcACATTTTGTTGggcttt i papAnu2.chr5 N 0 C 0 s chlSab2.chr7 132808286 468 + 135778131 TTTTCATGATGCCTGTCAC-------ATTCTGAAATGGAATGCAGTTAATTCCTCTCCTTCCTCAGCTCG-GTAAGTTTATTTTCTTAGAATCTATTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATACTGGAAGCAGCTCAGTGTAGAGCCATGACTAAAATAGTCAGAAATTATGTCCATAGA--AAATTCAAATCTGAGAATT-----------------AAAAGGAACAACAACTATAAAATACTATGG------ATCACTGAGAAAATGTGTATTCATTATTATCTAA--TGATGAA-ATGATCCAGCTGCACGAAGAGTCCACAGAGGACATGCCCGGGCAAA-GGTCTTTCATTTTACAATTCACATGGAAAGAGATGTGATGAGGCCCTAAAAGACAGCTCTGGTTTCATCTGGACCACAATTTAGTTAAT-AC--TG-TATTATATTGCTCTTTGTAGTGAAATGCAAAAATAAAAGGCACATTTTGTTGGGCTTT i chlSab2.chr7 N 0 C 0 s calJac3.chr3 188191605 468 - 190850796 TTTTCATGATGCCTGTCAC-------CTTCTGGAATGGAATGCGGTTAATTCCTCTGCTTCCCCAGCTCA-GTAAGTTTATTTTCTCACAATCCGTTCTCTGAGTT--------AGAACTAGCTCTGATTAAGTGCTATATTGAAAATAGCCGAGTGTAGAGCCCTGGTTAAAATAATCAGAAATTATATCCATAGA--ATATTCAAATCTGAGAATT-----------------AAAAGCAACAACCACTGTGAAGTAGAATGT------ATCACTGAGAAAATGTGTATTCGTGATTGTTCAA--CGATTAA-ACGATCCAGCTTCGGGAAGAGTCCACGGAGGACAGGCCCGGGCAAA-GGTCCTTCATTTCACAATTCACATGGAAAGCGATACTATGAGATCCTAAAAGACAGCTCTGCTTTTATTTGGACCACGATTTAGTCAAA-AC--TG-TTTTATACTGTTATTTGCAGTGAAATGCAAAAATAAAAGGCATATTTTATGTGGCTTT i calJac3.chr3 N 0 I 327 s mm10.chr8 84675256 482 - 129401213 TTTCCCTATTGCCTATCAC-------ATTCTGAAATGGGCTATGCTTAATTTCTCCCCTTTCTTTAGTCGAGTATGTTTATTTTCTTAGAGTCTACTCTTTGAGTTAATTTAAAAGAACTAACCCTGGTTAAGCACCACATTGAGAGGGGCTCAGCACCTAGCCATGGTTAAAACCATGTGACTATCCAGCCAGAGAAGAAAATCAAATCTGAAAATT-----------------CAAAACTGCACCAACAGGGA--CATCATGGCAGCCCGCAGCTGAGAGGATGGGTGTCCATTGTTGTTTAATGTGATCAACGTGATCTAGC----GGAAGGACACATAGAAGACCTTCCCAGGCAAA-CACTTTTCATTTTGGAGTTCATATAGCAAGAGATACCGCAAAATCCTCAAACACAATCCTAGTTTCATATGGACCTAATTTTAGTTAATGGC--AT-TATGCTGTTGCTTTTTATAATAGAATAC-AAAATGAAAGGCATATGTTATCGGCCTAT i mm10.chr8 N 0 C 0 s canFam3.chr16 15685320 490 - 59632846 TTTTCACATGGCCTGTCAC-------ATTCTGACACGGAATGTACTTAATTTCTCTCCTTTCTCAGTTCA-GCGAGTTTGTTTTCTTAGAATCTATTCTTTGAATTAGTTTAA-GGAACTAAGTTCAATTAAGTGCCACAGTGGAAGTAGCTCAATATATAGCCATGGCTAAACT-GAAGAAAATTATACCCATAGAAGAAATTCAAGTCAGAGAATTAGGGAAAAAAGAAAAAAAAAAAAAAGAACAACAATAAAGTGCTGTGT------ATCACTGAGAAAGTGTGGATTCATTATTGTTTAA--TAATTAA-ATGAGCTAG-TGGAGGAAGAGTGCTCAGAGGGCATGCCCGGGCAAAGGGCTTTTCCTTTTATAATTTACACAGAAAGAGCTATCATGAGATCCTTAAAGGCAGCTCTGGTT---TGTGGCCCAAAATGTAATGAAT-GC--TATTATAATATTGCTCTTTGTAGTGAAATGC-AAAATAAAAGGAATATTTTATTGATCTTT i canFam3.chr16 N 0 C 0 a score=2741783.000000 s hg38.chr4_KI270785v1_alt 468 752 + 119912 AAAAACAATTTTTACACGGACATTCATCGGAAGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATCTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTTGCTTCATCCCATCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAATATGCCCCTTTTTATTGTGAAGTCTAACTCACCTTCATAAAAGTC-AACGTATTGAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTTATGTGCCGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTCATCCCTGATGAATTCAGGTAAAATTGCATCACTGAAATCACTCAAACTACTCTGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAACTTATGTGCACATGCACA--GAGGTCCAAAAGGTTAAGCATCTTACGGCTTCTAGGAACTTCATAA-------CATCATCCAGCTTCTCAAGGAATGGTTTTCCTACACAAGAAGAAATCATAAAATGT--AGTCATCTGTAAATATGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAATGACATGCATCACGAATACTGTCAGCAAGAGATACATTTTAGGGT---AGGGAATAAATGAC----TTTGAAAAAGTT s panTro4.chr4 190272965 754 + 193495092 AAAAACAATTTTCACATGGACATTCATTGGAAGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATCTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTTGCTTCACCCCATCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTTAGAAATAGACAAAACAATATGCCCCTTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGCATTGAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTCGTCCCTGATGAATTCAGGTAAAATTGCATCACTGAAATCACTCAAATTACTCTGAAGCCGTTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAACTTATGTGCACATGCCCA--GAGGTCCGAAAGGTTAAGCATCTTACGGCTTCTAGGAACTTCATAA-------CATCATCGAGCTTCTCAAGGAATGGTTTTCCTACACAAGAAGAAATCATAAAATGT--AGTCA-CTGTAAATACGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAATGACATGCATCACTAATACTGTCAGCAAGAGATACATTTTAGGGTTAAAGGGAATAAATGAC----TTTGAAAAAGTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195238592 755 + 198332218 AAAAACAATTTTCACATGGACATTCATTGGAAGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATCTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTTGCTTCATCCCATCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGACATAGACAAAACAATATACCCCTTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGTATTGAAATATCAATCAATCCAGCAACTGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCATGTGAGCAGCTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTCGTCCCTGATGAATTCAGGTAAAATTGCATCATTGAAATCGCTCAAACTACTCCGAAGCCATTTTTAAAAGGCAGCTCCGTTCAGGTTTGTTGGTTTTAAGTATCAGCTTATGTGCACATGCACA--GAGGTCAAAGAGGTTAAGCATCTTACGGCTTCTAGGAACTTCATAA-------CACCATCGAGCTTCTCAAGGAATGGTTTTCCTACACAAGAAGAAATCATAAAATGT--AGTCATCTGTAAATACGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAATGACAGGCATCACTAATATTGTCAGCAAGAGATACATTTGAGGGTTAAAGGGAACAAATGAC----TTTGAAAAAGTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111210985 754 + 115148730 AAAAACAATTTTCACGTGGACATTCATTGGAAGATTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATCTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTTGCTTCATCCCATCAAGCAATCATAGAGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAATATACCCCTTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTCAAATGTATTGAAATATCAATCAATCCAGCAATAGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTATCACCACCCATTGATTTTCGTCCCTGATGAATTCAGGTAAAATTGCATCATTGAAATCGCTCAAACTACTCCGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAAC-TATGTGCACATGCACG--GAGGTCAAAAAGATTAAGTATCTTACGGCTTCTAGGAACTTCATAA-------CACCATCGAGCTTCGCAAGGAATGGTTTTCCTACACAAGAAGAAATCATAAAATGT--AGTCATCTGTAAATATGAG----AATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAATGACATGCGTCACTAATATTGTCAGCCAGAGATGCATTTTAGGGTTAAAGGGAATAAATGAC----TTTGAAAAAGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181013600 759 + 184069350 AAAAACAATTTTCACATGGACATTCATTGGAGGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATGTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTCGCTTCATCCCGTCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAGTATACCCCCTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGTATTGAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTTGTCCCTGATGAATTCAGGTAAAATTGCATCATTGAAATCACTCAAACTACTGTGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAGCTTCTCTGCACATGCACA--GAGGTCAAACAGGTTAAGCATCTTACGGCTTCTAGGAACTTCATAA-------CGCCATCGAGCTTCTCAAGGCGTGGTTTTCCTACACAAGAAGAAATCATAAAATGT--AGTCATCTGTAAATATGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAAAGACACGCATCACTAGTATTGTCAGCAAGAGATACATTTTAGGGTTAAAGGGAATAAATGACTTTGTTTGAAAAAGTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186351067 759 + 189454096 AAAAACAATTTTCACATGGACATTCATTGGAGGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCTTTTGAGCTATAATAGAAATGTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTCGCTTCGTCCCGTCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAGTATACCCCCTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGTATTGAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTTGTCCCTGATGAATTCAGGTAAAATTGCATCATTGAAATCACTCAAACTACTGTGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAGCTTCTCTGCACATGCACA--GAGGTCAAACAGGTTAAGCATCTTACGGCTTCTAGGAACTTCGTAA-------CGCCATCGAGCTTCTCAAGGCGTGGTTTTCCTACACAAGAAGAAATCGTAAAATGT--AGTCATCTGTAAATAGGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAAAGACACGCATCACTAATATTGTCAGCAAGAGATACATTTTAGGGTTAAAGGGAATAAATGACTTTGTTTGAAAAAGTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175966522 759 + 178775436 aaaaacaattttcacaTGGACATTCATTGGAGGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCCTTTGAGCTATAGTAGAAATGTGATAGTACAATTAACCCAGATT----------------------TGTGCTGGCTCGCTTCATCCCGTCAAACAATCATAGGAATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAGTATACCCCCTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGTATTAAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTGATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTTGTCCCTGATGAATTCAGGTAAAATTGCATCATTGAAATCACTCAAACTACTGTGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAGCTTCTCTGCACATGCACA--GAGGTCAAACAGGTTAAGCATCTTACGGCTTCTAGGAACTTCGTAA-------CGCCATTGAGCTTCTCAAGGCGTGGTTTTCCTACACAAGAAGAAATCGTAAAATGT--AGTCATCTGTAAATACGAGAATTAATCTGT-----T----AAGATtcata---agtttattttcttttgttataaaatcaaggaaaaaagaCACGCATCACTAATATTGTCAGCAAGAGATACATTTTAGGGTTAAAGGGAATAAATGACTTTGTTTGAAAAAGTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132808754 759 + 135778131 AAAAACAATTTTCACATGGACATTCATGGGAGGGTTTCAAAACTTTGATGATTTAA-ATGCTTTTCCTTTGAGCTATACTAGAAATGTGATAGTACAATTATCCCAGATT----------------------TGTGCTGGCTCGCGTCATCCCGTCAAACAATCATAGGGATTATTTACA-TTTCGAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAGTATACCCCCTTTTATTGTTCAGTCTAACTCACCTTCATAAAAGTC-AACGTATTGAAATATCAATCAATCCAGCAATTGCT------------------TTTTGTTATGTGCTGCAGTATGGATCCTCAGGGACTCCAGACCGTGTGAGCAACTAACAGGAAACAACACCAGATGTGCTGTAT---CAGCCATTGATTTTCGTCCCTGATGAAGTCAGGTAAAATTGCATCATTGAAATCACTCAAACTACTGTGAAGCCATTTTTAAAAGGCAGCTCTGTTCAGGTTTGTTGGTTTTAAGTATCAACTTCTGTGCACATGCACA--GAGGTCAGACAGGTTAAGCATCTTACGGCTTCTAGGAACTTCGTAA-------CGCCATCGAGCTTCTCAAGGTGTGGTTTTCCTGCACAAGAAGAAATCATAAAATGT--AGTCATCTGTAAATACGAGAATTAATCTGT-----T----AAGATTCATA---AGTTTATTTTCTTTTGTTATAAAATCAAGGAAAAAAGACATGCATCACTAATATTGTCAGCAAGAGATACATTTTAGGGTTAAAGGGAATAAATGACTTTGTTTGAAAAAGTT i chlSab2.chr7 C 0 I 5 s calJac3.chr3 188192400 700 - 190850796 aaaaaCAGTTTTCACATGGATATTCATTGAAAGGTTTCAAAACCTTGATGATTGAA-ATGCTTTCCTTTTGAGGTACAATAG-AATCTAAAAGGACAGTTAGCT---ATT----------------------TCTGCTGGCATGCTTCATCCTATCAGGCAATCATAGGGAGGATTTACA-TTTCCAGTGGGAACATAAATATCTTAAGAAATAGACAAAACAATGTACCCCTTTTTATTGTTCAGTCTAACTCACCTTCATAAACGTC-AGCGTCTTGAAATATCAGTCAATCCAGCGATTGCT------------------CTTTGTTATG--------------TCCCCAGGGACTGCAGACTGTGCGAGGCAGCGACAGGA---AGCACCAGATGTGCCGTCT---AAGCCATCGATTTTCGCCTCTGATGAATTTAGGTAAAATTGCATCATGGAAATCACTCAGACAACT------------------GGCAACTCTACTCAGGTTTGTTGCTTTTAAGTATCAACTTGTGTGCACGTGGACA--GAGGTCAGAAAGGGGAAGCCTCTCATGGCTTCTGGGAACCTCATGA-------CACCATCAAGCTTCTCAGGGAATGGTTTTCCCACATCTGAAGAAGTCATAAAATGG--AGTCATTTGTAAATATGAGAATTAATCCGT-----T----AAGATCCCTA---AGTTTATTTTCTTTCATTATAAAAGCAAGGAAAAATGACATGCATCACTA-TATTGCCAACAAGAGATACGTTTTAGGGCTAAACTGAAAAGTT------------------- i calJac3.chr3 I 327 C 0 s mm10.chr8 84675738 782 - 129401213 GAAATGTATTATCATATGGATAGTTATGAGAAGATTTCAGAACACTGAAGATCTAATGAGCTTTTCTTCTGAGGAATAACAGAAGACAGATTGTACAATTAACCCAGCTTAGGTCCTGGTTAGTGTTAGGGCTGTGGTAATTTTCTTCATTTCATGAAGCAATACCAGGGACTCTCCACATTTTTGTGTGGGAATGTGTGTTTTTAAGGAAATCGACAAAGCCATATATTGC--TTTATTGTTCAGCGTTTCTCGCCTTCATAAGAGCCAAATATATTGCCAGATCAATCAACACAGCAATTGCT-----------------CTTTTGTTACCTGCTGCTATGTGGTTCATCAGGGACTTCAGACCCCGTGAGAAGTCATTAGGAAAGGAGACCAAATGTGTCGAAA---CTGCCATTGACTTTTATCCCTGATGAGTGCCGGTAACATGGCATCACTGAAACCAGTCACACCATCATTAAGACAGTTTTATAAGGCAAATCTCTGTGGGTCT-TTGGTTAGCAGAATCTACCGTTATGCACAGGAACAGGGAGGTCCAAGTGATAGACCGTCTT-CGACTGCTGGGAGCGTCATAAAGGAAAGCACCATTGAACTTCCCA-GTCACAGCTTTCCTACAGTGGAAGACACCATCACCTGT--------CTGCATCCATGAGGACTCATCCGCATAGAA----GAGACTCATG---ACATTG--ATCTTCCGTTATAAAACCAAGGAAAAGTGACAGGAGTTCTTAATAGTGTCGGCAAAAGGCACATTGGGGGATCTAAAAGAACATGTGACTT--TTAGATGACG-- i mm10.chr8 C 0 I 3 s canFam3.chr16 15685810 769 - 59632846 GAAAACGGTTTTCATATGGATGTTCACTGGAAGGTTTCAAAACCTAAAAGATTCAA-ATGCTTTTCTTTTGAGATGTAATAGAAATCTGATAGTAAAATTAATTCAGATT----------------------TGTGTCGATGTACTTC--------AAGTAGTCATAGGGATTATTTACA-TTTTGAAATAGAAAATAA-------TAGAAACAGACAAAATAATATATCTATTTTTATGGTTAAGTATGACTTGCCTACATACAAGTC-AGTGCACTGAAATATCAATCAATCTAGAAtttttttttttttttttttttttttttttttACACACTGCTATATGGGTCGTCAGGGACTGCAGATTTTCAGAGCAAC-AACAGGAAACAAGATCAGGTGTGTTATAT---AAGCCATTGATTT--GTCCCTGATGAATTCAGGTGAAATTGCATAATTTAAATCACACAAACTCCTTCTAAGCCATTTTTAAAAAGCTAATCTGCTCGGGTTTAGTGTTTCAAAGTATCCGCTTATGTGCACATGTACA--CAGATAAAGCAGGTTAAATGTCTTACTGCTGTTAGGAACTTGATAA----GAACGCCATCGAGCTTTCTGAGCCATGGTTTCCCTAC-CCAGAAGAAATCATAAACTGTCAAGTCA-ATGTAAATATAAGGATTGATCTAT-----TAAGAAAGATTCATGCTTAGTTTATTTTCTTTTGTTAGCAAATCAAGGAAAAATGGCATGTATCACAAATGTTGCCAGCAAGAAGCACATTTTGGGGTTACATGGAATAAATAACTGTACTTGCAAAAGAA i canFam3.chr16 C 0 C 0 a score=15360.000000 s hg38.chr4_KI270785v1_alt 1220 14 + 119912 ATACTACTTTCCTT s panTro4.chr4 190273719 14 + 193495092 ATACTACTTTCCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195239347 14 + 198332218 ATACTACTTTCATT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111211739 14 + 115148730 ATACTACTTTCATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181014359 6 + 184069350 --------GTGATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186351826 6 + 189454096 --------GTGATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175967281 6 + 178775436 --------GTCATT i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188193100 14 - 190850796 ATACTACTTTCATT i calJac3.chr3 C 0 C 0 s mm10.chr8 84676523 14 - 129401213 AAATGATTTTCATT i mm10.chr8 I 3 C 0 s canFam3.chr16 15686579 14 - 59632846 ATAGCACTTGCTTT i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132809513 5 + 135778131 I a score=68081.000000 s hg38.chr4_KI270785v1_alt 1234 26 + 119912 GGTTTGTAGTGATCgagtgcaggaaa s panTro4.chr4 190273733 26 + 193495092 GGTTTGTAGTGATCGAGTGcaggaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195239361 26 + 198332218 GGGTTGTAGTGATCGAGTGcaggaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111211753 26 + 115148730 GGTTTGTAGTGATCGAGTGcaggaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181014365 26 + 184069350 GCTTTGTAGTGATCGAGTGcaggaaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186351832 26 + 189454096 GCTTTGTAGTGATCGAGTGcaggaaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175967287 26 + 178775436 GCTTTGTAGTCATCGAGTGCAGGAAA i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188193114 26 - 190850796 GGCTTGTACTGATCGAGTGAaggaaa i calJac3.chr3 C 0 C 0 s mm10.chr8 84676537 26 - 129401213 ATTTTATAAGGATAGAGTATAGGAAA i mm10.chr8 C 0 C 0 e canFam3.chr16 15686593 0 - 59632846 C e chlSab2.chr7 132809513 5 + 135778131 I a score=1002395.000000 s hg38.chr4_KI270785v1_alt 1260 331 + 119912 tgc-ttccccaaaatatggcaccttgggatcctgagtgttttaagctgaaggataatgagaaacc-ccagattctaggaaggtcactctcttaccttctcctgcctttctcctctgaggccatgaagagagttctctgacctacgtcccctggaagaaggccgataagaccctcactccagatgggtcctgccctatcctcagaggccaagaggaatctgaa--------taaatagcccttgctaaaccccccagttaa--tgact------------------------------------------------------------------------gtttgctcatacccactatttgttccgtcatcctcctaca-ggccgtctattctccatcaaacctaagcataaaaat s panTro4.chr4 190273759 331 + 193495092 tgc-ttccccaaaatatggcacctcgggatcctgagtgttttaagctgaaggataatgagaaacc-ccagattctaggaaggtcactctcttaccttctcctgcctttctcctctgaggccatgaagagagttctctgacctacgtcccctggaagaaggccgataagaccctcactccagatgggtcctgccctatcctcagaggccaagaggaatctgaa--------taaatagcccttgctaaacctcccagttaa--tgact------------------------------------------------------------------------gtttgctcatacccactatttgttccgtcatcctcctaca-ggccgtctattctccatcaaacctaagcataaaaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195239387 331 + 198332218 tgc-ttccccgaaatacggcaccttgggatcctgagtgttttaagctgaaggataatgagaaacc-ccaaattctaggacggtcactctcttaccttctcctgcctttctcctctgaggccgtgaagagagttccctgacctacctcccctggaaggaggtcgataagaccctcactccagatgggtcctgccctatcctcagaggccaagaggaatatgaa--------taaatagcccttgctaaaccccccagttaa--tgact------------------------------------------------------------------------gtttgatcatacccactatttgtttggtcatcctcctaca-ggctgtctatcctccatcaaacctaagcataaaaat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111211779 331 + 115148730 tgc-tttcccaaaatatggcaccttgggatcctgagtgttttaagctgaaggaaaatgagaaacc-ccagattctaggaaggtcactctcttaccttctcctgcctttctcctctgaggccgtgaagcgagttccctgacctacctcccctggaaggaggccggtaagaccctcactccagatgggtcctgccccatcctcagaggccaagaggaatctgaa--------taaataccccttgctaaaccccccagttaa--tgact------------------------------------------------------------------------gtttgctcatacccactatttgttgggtcatcctcctaca-ggctgtctattttccgtcaaacctaagcataaaaat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181014391 331 + 184069350 tgc-ttccccaaaagatggcaccttgggatcctgagtgttttaagctgaaggaaaatgagaaacc-ccaaattctaggaaggttactctcttaccttctcctgcctttctcctctgaggccgtgaagagaattctctgacctacctcccctgaaaggaggccgataagcccctccgtccagacgggtcctgccctatcctcagaggccaagaggaatctgaa--------taaatcgaccttgctaaaccccccggttaa--tgcct------------------------------------------------------------------------gttcgctcatatctgctatttatttggtcatcctccaaca-ggctgtctattctccatcaaacctatgcataaaagt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186351858 331 + 189454096 tgc-ttccccaaaagatggcaccttgggatcctgagtgttttaagctgaaggaaaatgagaaacc-ccaaattctaggaaggttactctcttaccttctcctgcctttctcctctgaggccgtgaagagaattctctgacctacctcccctgaaaggaggccgataagcccctccgtccagacgggtcctgccctatcctcagaggccaagaggaatctgaa--------taaatcgaccttgctaaaccccccggttaa--tgcct------------------------------------------------------------------------gttcgctcatatctgctatttatttggtcatcctccaaca-ggctgtctattctccatcaaacctatgcataaaagt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175967313 331 + 178775436 TGC-TTCCCCAAAAGATGGCACCTTGGGATCCTGAGTGTTTTAAGctgaaggaaaatgagaaacC-CCAAATTCTAGGAAGGTTACTCTCTTACCTTCTCCTGCCTTTCTCCTCTGAGGTCGTGAAGAGAATTCTCTGACCTACCTCCCCTGAAAGGAGGCCGATAAGCCCCTCACTCCAGACGGGTCCTGCCCTATCCTCAGAGGCCAAGAGGAATCTGAA--------TAAATCGACCTTGCTAAACCCCCTGGTTAA--TGCCT------------------------------------------------------------------------GTTCGCTCATATCTGCTATTTATTTGGTCATCCTCCAACA-GGCTGTCTATTCTCCATCAAACCTATGCATAAAAGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132809518 331 + 135778131 tgc-ttccccaaaagatggcaccttggaatcctgagtgttttaagctgaaggaaaatgagaaacc-ccaaattctaggaaggttactctcttaccttctcctgcctttctcctctgaggccgtgaagagaattctctgacctacctcccctgggaggaggccgataagaccctcactgcagacgggtcctgccctatcctcagaggccaagaggaatctgaa--------taaatcgaccttgctaaaccccccagttaa--tgcct------------------------------------------------------------------------gttcgctcatatctgctatttatttggtcatcctccgaca-ggctgtctattctccatcaaacctatgcataaaagt i chlSab2.chr7 I 5 C 0 s calJac3.chr3 188193140 329 - 190850796 cgc-ttccccagaatatggtaccttggcctcctgaacgtttc-ggctgaaggaaaatgagaaagc-cctgactctaggaaggtcactgtcttaccttctccta-ctttctcctctgaggccgtgaagagacttctctgacccaccccggctggaaggaggcggataagaccctcactccagctgggccctgtgctagcctcagaggccaagcagaatctgga--------caaacagaccttgctaaaccccccaggtaa--taact------------------------------------------------------------------------gttccctcgtaccccctgtttgttcagtcatcctcctaca-ggctgtctattcttcatcaaccctacgcataaaaat i calJac3.chr3 C 0 I 302 s mm10.chr8 84676563 413 - 129401213 TGCTTTTCCCCAAATAGAGCACATCGATAAGTTGACTACTTTCAGCTGAACTAAAAGGAGGAATTGCCATTCCCCGCGAGAGCTACTTTTCAACCTTCTAC--CTTTTCTTTCCTGAAAATATGCGAGGGGCTCTGGGGTTTACTTCTCTTTGAAACAGGGT-ACAGTGCCTTCTGTTCATAGGGGTTCTGCCCTATACCTGCAGCTGGAGCAGAGACTGAAACTGGCCTTAAGAAGTACTTCCAGGTCACTACGGTTAGGTTGCCTGGGTCACTGTGGTTAGGTTGTGCAGGTTACCGTAGTTACAGGTCACTGCGGTTAGATTGCACAGGGCACTGGGTTAGGTTGTATTCACTATTTATCTAGGCATACTTCTACAGGGCTGTCTCTTTTCCATCCAACAGAAGCATGCAAAT i mm10.chr8 C 0 C 0 e canFam3.chr16 15686593 0 - 59632846 C a score=446256.000000 s hg38.chr4_KI270785v1_alt 1591 173 + 119912 acagttttccctgggtctctgggtctttacttctgaaggtgtccctgtaacatacaactttggttagatacgttttttacgtgtttctgttgttgatctgtgttttgttacaggggtctcagtcatgaaccttacaatgggtaaggaaaagatactactttttcttcc-----ctaca s panTro4.chr4 190274090 173 + 193495092 acagttttccctgggtctttgggtctttacttctgaaggtgtccctgtaacatacaactttggttagatacgttttttacgtgtttctgttgttgatctgtgttttgttacaggggtctcagtcatgaaccttacaatgggtaaggaaaagatactactttttcttcc-----ctaca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195239718 170 + 198332218 acagttttccctgggtctttgggtctttatttctgaaggtgtccctgtaacatataactttggttagatatgttttttacatgtttctgttgttaatctgtgttttgttaca---gtctcagtcatgaaccttacaatgggtaaggaaaagatactactttttcttcc-----ctaca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212110 173 + 115148730 acagttttccccgggtctttgagtctttatttctgaaggtgtccctgtaacatataactttggttagatacgttttttacgtgtttctattgttaatctgtgttttgttatgggggtctcagtcatgaaccttacaatgggtaaggaaaagatactactttttcttcc-----ctaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181014722 171 + 184069350 --agttttcctcgggtcttcaggtctttatttctgaaggtgaccctgtaacatacagctttggttaggtgtgtgttttatgtgtttctgttgttaatctgtgttttgttacaggggtgttagccatgaaccttacagtgggtaaggaaaagatactactttttcgtcc-----ctaca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352189 171 + 189454096 --agttttcctcgggtcttcaggtctttatttctgaaggtgaccctgtaacatacagctttggttaggtgtgtgttttatgtgtttctgttgttaatctgtgttttgttacaggggtgttagccatgaaccttacagtgggtaaggaaaagatactactttttcgtcc-----ctaca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175967644 171 + 178775436 --AGTTTTCCCCGGGTCTTCGGGTCTTTATTTCTGAAGGTGTCCCTGTAACATACAGCtttggttaggtgtgtgttttatgtgtttctgttgttaatctgtgttttgttacaggggtgttaGCCATGAACCTTACAGTGAGTAAGGAAAAGATACTACTTTTTCGTCC-----CTACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132809849 171 + 135778131 --agttttccccgggtctttgggtcttcatttctgaaggtgtccctgtaacatacaactttggttaggtgtgtgttttatgtgtttctgttgttaatctgtgttttgttacagggatgttagccctgaaccttacagtgggtaaggaaaagatactactttttcgtcc-----ctaca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188193771 122 - 190850796 acagtttcccctgggtctttgggtctttatttctgaaggtgtccctgtaacataaaacttaagttagataaattttttGCG---------------------------------------------------TACAATGGATGAAGAAAAGATACTACTTTTTCTTTC-----CTATA i calJac3.chr3 I 302 C 0 s mm10.chr8 84676976 139 - 129401213 ACAGTTT---CAGGGTC-ACAGGCTCATATGTCCCAACCCTTCCCTGTCACA-----------TCAAATCAACTCATGATGCTTTTCTCCTGCTAATCTGCCAGCTTTGACAAAGGTGCCACT-------GTGACAATG-----------------ACATCCTCTCCCTAACACCACT i mm10.chr8 C 0 C 0 e canFam3.chr16 15686593 0 - 59632846 C a score=1093637.000000 s hg38.chr4_KI270785v1_alt 1764 344 + 119912 GTAAATTTTGAACCTT----GGATTTAAACAAAAATTTAT-AAAATAATATGTTTGATTTGCTTTTGAGATtatatatatatatatatat---atatatatatatatttataGGCAAATAAGACTGACTATTAGTATGAAATATTTATCTTGTCAGATTTTTATACACTTGCAAACACATTTGTAATTTTTTCTGTTAGTACTTTTAACGGAACAGAAAAACAATAGAATACTCAGGGACTTC-----------CCACTTTTGTTGTGTATTTGTTTATGCTTTAACCTTATAATAATTTCAAATTACATTACTAGTTTCTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT s panTro4.chr4 190274263 328 + 193495092 GTAAATTTTGAACCTT----GGATTTAAACAAAAATTGAC-AAAATAATATGTTTGATTTGCTTTTGAGAT----------------TTT---ATATATGTATATATTTATAGGCAAATAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATACACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACGGAACAGAAAAACAATAGAATACTCAGGGACTTC-----------CCACTTTTGTTGTGTATTTGTTTATGCTTTAACCTTATAATAATTTCAAATTACATTACTAGTTTCTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195239888 332 + 198332218 GTAAATTTTGAACCTT----GGatttaaacaaaaatttat-aaaataatatGTTTGATTTGCTTTTGAGat------------tttttat---atatatatatttttttataGGCAAATAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACAGAACAGAAAAACAATAGAATACTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACCTTATAATAATTTCAAATTACATTACTAGTTTCTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212283 321 + 115148730 GTAAATTTTGAACCTT----GGATTTAAACAAAAATTTAT-AAAATAATAAGTTTGATTTGCTTTTAAGAT----------------tat---atatatatatatat------GCAAATAAGACTGACCATTAGTATGAAATATTTATCTCGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTATTTTTAACAGAACAGAAAAGC-ATAGAATGCTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACTTTATAATAATTTCAAATTTCATTACCAGTTTTGCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181014893 331 + 184069350 GTAAATTTTGAACCTT----GGATTTAAACAACAATTTAT-AAAATAATATGTTTGATTTGCttttaatat-------------atatat---atttttatatatatttataGGCAATTAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACAGAACAGAAAAGCAGTAGAATACTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACCTTATAATCATTTCAAATTACATTACTAGTTTTTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352360 331 + 189454096 GTAAATTTTGAACCTT----GGATTTAAACAACAATTTAT-AAAATAATATGTTTGATTTGCTTTTAatat-------------atatat---atatttatatatatttataGGCAATTAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACAGAACAGAAAAGCAGTAGAATACTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACCTTATAATCATTTCAAATTACATTACTAGTTTTTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175967815 330 + 178775436 GTAAATTTTGAACCTt----ggatttaaacaaaaatttat-aaaataatatgtttgatttgcttttaatat-------------atatat----tttatatatatatttataggcaATTAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACAGAACAGAAAAGCAGTAGAATACTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACCTTATAATCATTTCAAATTACATtactagtttttctttatttttacaaaatcatCTTCTGGACAATTCTTTAATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810020 334 + 135778131 GTAAATTTTGAACCTT----GGATTTAAACAAAAATTTAT-AAAATAATATGTTTGATTTGCTTTTAatat-------------gtatattatatatatatatatatttataGGCAATTAAGACTGACCATTAGTATGAAATATTTATCTTGTCAGATTTTTATATACTTGCAAACACATTTGTAATTTTCTCTGTTAGTACTTTTAACAGAACAGAAAAGCAGTAGAATACTCAGGGACTTC-----------CCACTTTTCTTGTGTATTTGTTTATGCTTTAACCTTATAATCATTTCAAATTACATTACTAGTTTTTCTTTATTTTTACAAAATCATCTTCTGGACAATTCTTTAATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188193893 324 - 190850796 GTATATTTTGAACCTT----AGatttaaa-aaaaatatat-aaaataatatGTTTGATTTGCTTTTAAGGT------------------------------ATATATTTATAGGCAAATCAGACTGACCATCAGCATGGAATATTTATCTTGTCAGATTCTTATATACTTGCAAACAGATTGACAATTTTCTC--TTAGTACTTTGAACAGAACAGAAAAGCCACAGAATATTCAGGGATTTC-TGATCCGTATTCACGTTTCTTATGTGTTTGTTTGTGCTTTAGCCTTACAGTGATTTCAAATCACATCAGTGGTTTTTCTTTATTTTTGCAAAATCATCTTCTGGACACTTGTTTAATTG i calJac3.chr3 C 0 C 0 s mm10.chr8 84677115 298 - 129401213 GTAGTTTATCAAACTT----AGGTT---------ATTT-------------------TTTTCTTTTAAATT--------------CATAA---AACAATACAGATATTTATAGGAAAACAAGGCTGACCATTACCATGAACTGTGTATTATGCCAGAT----------TTGCAAACAAAATT-TAGATTTTTCTGTCAGTAGCTTT--CAGAACATAAAATTAATAGGACATCTTGGGAGTTTGGGGGTGGTAAGGATGTTCCCTGTGTTTTTGTTTCTGATGTAGCCTTATTATGTTTGCAAATCACATTATTAATTTTTCTTAAAaattaattaattaactaat---taattaattaattT i mm10.chr8 C 0 I 222 s canFam3.chr16 15686593 322 - 59632846 GTGGATTTTGAATCTCGGAAGGATTTTTTCTTTAATTGGTAAAAACCATATGTATAATTTGATTTCCAGGT--------------------------------ACGTTTACAGGCTAACAA----GACCATTAATATGGAAAGTTTCTCTTGCCAGATTTTTGTACACTTGCAAAGAAATTTGTTACTTT-TCTGTTAGTACTTCTAA--GAACAG-AAAGTAGTAGAACATCCGAGGAGTTTCTGATCCATATGAACTTTTCTTGACTATTTGATCATGCTTTGGCATCACCATGATTTCAGGTCACATAGTTAGTTTTTCTTTATTTTTACAAAATGA-CTTTGGGACAATCCTTTAATTT i canFam3.chr16 C 0 C 0 a score=24053.000000 s hg38.chr4_KI270785v1_alt 2108 8 + 119912 GAAGACCT--- s panTro4.chr4 190274591 8 + 193495092 GGAGACCT--- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240220 8 + 198332218 GAAGACCT--- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212604 8 + 115148730 GAAGACCT--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015224 8 + 184069350 GAAGACCT--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352691 8 + 189454096 GAAGACCT--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968145 8 + 178775436 GAAGACCT--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810354 8 + 135778131 GAAGACCT--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194217 8 - 190850796 GAAGACCC--- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15686915 11 - 59632846 GAAGACAATCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84677413 222 - 129401213 I a score=737955.000000 s hg38.chr4_KI270785v1_alt 2116 226 + 119912 TAAATTTTATGCT----AGACAGC----------TTCCCCCAAGAAGTTCAGTTTTAATATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCATGCAATTTCCAGCTCCTTTTGCTACCTTTCCTTCCTTTTGTTACATTCTACTTTCTTTACACAGCCTCTGTAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGAC-ACCAATTTTC s panTro4.chr4 190274599 230 + 193495092 TAAATTTTATGCT----AGACAGC------TTTTTTTCCCCAAGAAGTTCAGTTTTAATATATATTCCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCATGCAATTTCCAGCTCCTTTTGCTACCTTTCCTTCCTTTTGTTACATTCTACTTTCTTTACACAGCCTCTGTAAGCACAGCAGCTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGAC-ACCGATTTTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240228 230 + 198332218 TAAATTTTATGCT----AGACAGC------TTTTTTTCCCCAAGAAGTTCAGTTTTAATATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCATGCAATTTCCAGCTCCTTTTGCTACCTTTCCTTCCCTTTGTTACATTCTACTTTCTTTACACAGCCTCTGTAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGAC-ACCAATTTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212612 230 + 115148730 TAAATTTTATGCT----AGACAGC------GTTTTTTCCCCAAGAAATTCAGTTTTAGTATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCATACAATTTCCAGCTCCTTTTGCTACTTTTCCTTCCCTTTGTTACATTCTACTTTCTTTACACAGCCTCTGTAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGAC-ACCAATTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015232 232 + 184069350 TAAATTTTATGTT----AGACAGA-----TTTTTTTTCCCCAAGAAGTTCAGTTTTAAAATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCACACAATTTCCAACTCCTTTTGCTACCTTTCCTTCCCTTTGTTACATTCTACTTTCTTTACACAGCCTCTGCAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGACAACCAATTTTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352699 232 + 189454096 TAAATTTTATGTT----AGACAGA-----TTTTTTTTCCCCAAGAAGTTCAGTTTTAAAATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCACACAATTTCCAACTCCTTTTGCTACCTTTCCTTCCCTTTGTTACATTCTACTTTCTTTACACAGCCTCTGCAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGACAACCAATTTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968153 232 + 178775436 TAAATTTTATGtt----agacaga-----ttttttttccccaagaagttcagttttaaaatatatttcacag-ta--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCACACAATTTCCAACTCCTTTTGCTAcctttccttccctttgttaCATTCTACTTTCTTTACACAGCCTCTGCAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGACAACCAATTTTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810362 232 + 135778131 TAAATTTTATGTT----AGACAGC----TTTTTTTTTCCCCAAGAAGTTCAGTTTTAAAATATATTTCACAG-TA--GTCTGGACTAGGAAAAGAAGTTGCAG-GCTATCACACAATTTCCAACTCCTTTTGCTACCTTTCCTT-CCTTTGTTACATTCTACTTTCTTTACACAGCCTCTGCAAGCACAGCAGGTCCTCATGGTCTAACTACC-AGCTTCTACAAAGCATGTGACAACCAATTTTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194225 232 - 190850796 GAAATTTTGTGCT----AGACAGCT---TTTGTTTTTTCCCAAGAAGTTCAGCTTTTAAATATGTTTTAGAGTTA--GTCCAGACTAGGAAAAGAAGGTGCA--GCTGTCAGGCAGCGTCAAGCCCCTTGTACGACCTTTCCTTTCCGTTGTCACATTCTACTTCCCTGACACGGCCTCTGCAAGCACGGCACGTCCTCACGGTCCAACCACC-AGCTTCCACAAGGC--GTGACAACGCGTTTCC i calJac3.chr3 C 0 C 0 s mm10.chr8 84677635 193 - 129401213 TAGATTTTAT-------------------TTCATTTTATTCAAGAAGTGTGTTTTTCAAATAAGTTT-AAAG-CT--GTCC-----AGGAAGAGACATTTCAGAACCATCAT------------CTCTTTCATAACCTTTCTATATTCTTGACCCAGCC-----------AACACCCTCACCTAGTATTATAAATCTTCCCAGTCTAACTACT-AGTAGCTACAAAGTATGTGATGACcttcttc- i mm10.chr8 I 222 I 1772 s canFam3.chr16 15686926 237 - 59632846 TAAATTTATTCTTACCAAGTCAGTTCCCCACCCGCCCCCCCAAGAAATGTAGTTTTCATATATATTTCCCAG-TTCCGTCTGGACAAGG---AGAGGTGGCAA-GCTATAATGAAATTTCCAGTTCCATTT----CCTCTCTTTCCCCTGGTCACATTTTATATTCTGCACGCAGCCTCAGCAGGCATTACACGTCCTGGCGGCCCAATTGCTAAGTTTCTACAGAGCGCGGGACAATCAACTTTG i canFam3.chr16 C 0 C 0 a score=148292.000000 s hg38.chr4_KI270785v1_alt 2342 49 + 119912 CAGCACCGAGGAAGCTATAACTTAGTGAACACTCATTC-ACCCACTGAGG s panTro4.chr4 190274829 49 + 193495092 CAGCACCGAGGAAGCTGTAACTTAGTGAACACTCATTT-ACCCACTGAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240458 49 + 198332218 CAGCACCAAGGAAGCTATAACTTAGTGAACACTCATTT-ACCCACTGAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212842 49 + 115148730 CAGCACCGAGGAAGCTATACCTTAGTGAACACCCATTC-ACCCACTGAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015464 49 + 184069350 CAGCGTGGAGGAAGCTGTAACTTAGTGAACACTCATTC-ACCCACTGAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352931 49 + 189454096 CAGCGTGGAGGAAGCTGTAACTTAGTGAACACTCATTC-ACCCACTGAGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968385 49 + 178775436 CAGCGTGGAggaagctgtaacttagtgaacACTCATTC-ACCCACTGAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810594 49 + 135778131 CAGCATGGAGGAAGCTGTAACTTAGTGAACACTCATTC-ACCCACTGAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194457 49 - 190850796 CAGCACCGAGGAAGCTGTAGCCTACTGAACACTCATCC-ATCCACTGAGG i calJac3.chr3 C 0 I 3 s canFam3.chr16 15687163 49 - 59632846 CTTTACTGAGCAGGATGGAACTCAGCCAGACATCATTCTACCCCCAGAG- i canFam3.chr16 C 0 C 0 e mm10.chr8 84677828 1772 - 129401213 I a score=211534.000000 s hg38.chr4_KI270785v1_alt 2391 82 + 119912 AGCTTGCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGACAATC- s panTro4.chr4 190274878 82 + 193495092 AGCTTCCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGACAATC- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240507 79 + 198332218 AGCTTCCAGATGAAATGATAATTGCACATACTATGTCTT----GGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGACAATC- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212891 82 + 115148730 AGCTTCCAGATGAAATAAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGACAATC- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015513 82 + 184069350 GGCTTCCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGTCAATC- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186352980 82 + 189454096 GGCTTCCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGTCAATC- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968434 82 + 178775436 GGCTTCCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCGGGACAG-GAAGGACGATGCAGTCAGTC- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810643 82 + 135778131 GGCTTCCAGATGAAATGAT-ATTGCACATGCTATGTCTTAGAGGGAGGCACAGAGCTGGACAG-GAAGGACGATGCAGTCAATC- i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15687212 84 - 59632846 GGCTGCAAGATCAAAAGAT-ATTATGTCCACCAGGTCTTAGGGTGAAGTACAAAGCTGCAGATCGAAGGACAAATCAAGACGCCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84677828 1772 - 129401213 I e calJac3.chr3 188194506 3 - 190850796 I a score=593474.000000 s hg38.chr4_KI270785v1_alt 2473 197 + 119912 GCCTCTTCATATTGATTTGAGTCTTCACTAACATCAATCCCCATTCACAGATCCTAA-CTCAGAGCAGCGGGAAAAAAAATTG-GAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAATTCCTTCCTGATTTCACATTTT-GGCAGACCATTAAATATAGGAACGCGATTCACCAGAGTCAAGCATATACTT---CC s panTro4.chr4 190274960 197 + 193495092 GCCTCTTCATGTTGATTTGAGTCTTCACTAACATCAATCCCCATTCACAGATCCTAA-CTCAGAGCAGCGGGAAAAAAAATTG-GAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAATTCCTTCCTGATTTCACATTTT-GGCAGACCATTAAATATAGGAACGTGATTCACCAGAGTCAAGCATGTACTT---CC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240586 197 + 198332218 GTCTCTTCATATTGATTTTAGTCTTCGCTAACATCAATCCCCATTCACAGATCCTAA-CTCAGAGCAGCGGGAAAAAAAATTG-GAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAATTCCTTCCTGATTTCAAATTTT-GGCAGACCATTAAATATAGGAACGTGATTCACCAGAGTCAAGCACATACTT---CC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111212973 197 + 115148730 GTCTCTTCAGATTGATTTTAGTCTTCACTAACATCAGTCCCCATTCACAGATCCTAA-CTCAGAGCAGTGGGAAAAAAAATTG-GAACTACCCAATGCCTACTCTAAAGTGCTCTCAGGAAAAATTCCTTCCTGATTTCAAATTTT-GGCAGACTATTAAATATGGGAACGTGATTCAGCAGAGTCAAGCATATACTT---CC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015595 196 + 184069350 GTCTCTTCGTATTGATTTTAGTCTTCACTAACATCAATCCCCATTCACAGATCCTAT-CTCAGAGCAGTGGGAAGGAAAATTG-AAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAGCT-CTTCCTGATTTCAGATTTT-GGCAGACCATTAAATATAGGAACGTGATTCACCAGAGTCAAGCATGTACTT---CC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353062 196 + 189454096 GTCTCTTCGTATTGATTTTAGTCTTCACTAACATCAATCCCCATTCACAGATCCTAT-CTCAGAGCAGTGGGAAGGAAAATTG-GAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAGCT-CTTCCTGATTTCAGATTTT-GGCAGACCATTAAATATAGGAACGTGATTCACCAGAGTCAAGCATGTACTT---CC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968516 196 + 178775436 GTCTCTTCGTATTGATTTTAGTCTTCACTAACATCAATCCCCATTCACAGATCCTAT-CTCAGAGCAGTGGGAAGGAAAATTG-GAACTACCCAATGTCTGCTCTAAAGTGCTCTCAGGAAAAGTT-CTTCCTGATTTCAGATTTT-GGCAGACCATTAAATACAGGAACGTGATTCACCAGAGTCAAGCATGTACTT---CC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810725 196 + 135778131 GTCTCTTCGTATTGATTTTAGTCTTCACCAACATCAATCCCCATTCACAGATCCTAT-CTCAGAGCAGTGGGAAGAAAAATTG-GAACTACCCAATGTCTACTCTAAAGTGCTCTCAGGAAAAGTT-CTTCCTGATTTCAGATTTT-GGCAGACCATTAAATATAGGAACGTGATTCACCAGAGTCAAGCATGTACTT---CC i chlSab2.chr7 C 0 C 0 s mm10.chr8 84679600 195 - 129401213 GTCCTTTCTCATTTACTATAGTCAGCACCAAGTTTAGTCCTAATTCGCTGATTCTAA--------CAATGGTGAGAAACATTACAAACATCCCAGTGTGTATTCTAACGTACTCAAAGAAGAAGTTCCTTTGTGATTTTTCACTTTGGGCATACCGTTAAACACAGGCATGTGATTCACCAGAGAAAAGCACAGAATTGTACT i mm10.chr8 I 1772 C 0 s canFam3.chr16 15687296 180 - 59632846 ATCCTTTCACATTTA----AGTCCTCACTAGTATTAGTCCTCATCTACTGATCCCAAGAAGAAAGGAAAAAAAAAAAAAAATC-AAACTACTCCATGTCTGTTCTAAAGTGTT--------------CCTTCTGATTTCAAATTTT-GGCAGACAGTTAAATGTAGGAACATGATTCACCAGAATCAAGCATATAATT---CC i canFam3.chr16 C 0 I 73 e calJac3.chr3 188194506 3 - 190850796 I a score=489138.000000 s hg38.chr4_KI270785v1_alt 2670 222 + 119912 TACTGCTGTGAGACTGGACTTCAGAATAAAGAAATAACttttttt-------tttttttttctgagatggagtctcactctgtcccccagactagagtgcagtgg-catgatctcggctcactgcaacctctgcctttcaggttcaagcaattctcctgtctcagcctcccaagtagctgggactatagacacctgcaccacgcctgactactttttgtatttttagtag s panTro4.chr4 190275157 222 + 193495092 TACTGCTGTGAGACTGGACTTCAGAATAAAAAAAGAACttttttt-------ttttttttcctgagatggagtctcactctgtcccccagactagagtgcagtgg-catgatctcggctcactgcaacctctgcctttcaggtgcaagcaattctcctgtctcagcctcccaagtagctgggactgtaggcacctgcaccacgcctgactactttttgtatttttagtag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240783 216 + 198332218 TACTGCTGTGAGACTGGACTTCAGAATAAAAAAAGAACttttttt-------tttt------tgagatggaatctcactctgtcccccagactagagtgcagtgt-catgatctcggctcactgcaacctctgcctctcaggttcaagcaattctcctgtctcagcctcccaagtagctgggactataggcacctgcaccaggcctgactactttttgtatttttagtag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213170 222 + 115148730 TACTGCTGTGAGACTGGACTTCAGAATAAAAAAAGAACttttttt-------ttttttttt-tgagatggagtctcactctgtcccccagattggagtgcagtggccatgatctcggctcactgcaagctccgcctctcaggttcaagcaattctcctgtctcagcctcccaagtagctgggactataggcacccacaccatgcccgactactttttgtatttttagtag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181015791 226 + 184069350 TACTGCTGTGAGCCTGGACTTCAGAATAAA-AAAGAACtttttttctttc--tttttttttttgagatggagtctcactctgtcccccagactggagtgcagtgg-catgatttcggctcactgcaacctctgcctctcaggttcaagcagttctcctgtctcagcctcccaagtagctgggactacaggcgcccgcaccacgcccgaccactttttgtatttttagtag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353258 228 + 189454096 TACTGCTGTGAGCCTGGACTTCAGAATAAA-AAAGAACtttttttctttctttttttttttttgagatggagtctcactctgtcccccagactggagtgcagtgg-catgatttcggctcactgcaacctctgcctctcaggttcaagcagttctcctgtctcagcctcccaagtagctgggactacaggcgcccgtaccacgcccgactactttttgtatttttagtag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968712 227 + 178775436 TACTGCTGTGAGCCTGGACttcagaataaa-aaagaactttttttctttc-ttttttttttttgagatggagtctccctctgtcccccagactggagtgtggtgg-catgatctcggctcactgcaacctctgcctctcaggttcaagcagttctcctgtctcagcctcccaagtagctgggactacaggcgcccgcaccacgcccgactactttttgtatttttagtag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132810921 226 + 135778131 TACTGCTGTGAGCCTGGACTTCAGAATAAA-AAAGAACtttttttctttc--tttttttttttgagatagagtctcactctgtcccccagactggagtgcagtgg-catgatctcggctccctgcaacctctgcctctcaggttcaagcagttctcctgtctcagccccccaagtagctgggactacaggcgcctgcaccacgcccgaatactttttgtatttttagtag i chlSab2.chr7 C 0 C 0 s mm10.chr8 84679795 76 - 129401213 TACTACTGGAAATCTCAAGTGCAGAGTAAA-A------------------------------------------------TATACCACAGATT----TAAAATGA-CACCCTATCGATTC----------------------------------------------------------------------------------------------------TTTTTAGTGG i mm10.chr8 C 0 I 20 e canFam3.chr16 15687476 73 - 59632846 I e calJac3.chr3 188194506 3 - 190850796 I a score=199883.000000 s hg38.chr4_KI270785v1_alt 2892 79 + 119912 agacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatctgcctgcctcggcctcccaaag s panTro4.chr4 190275379 79 + 193495092 agacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatctgcctgcctcggcctcccaaag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195240999 79 + 198332218 agacggggtttcaccgtgttggccaggcaggtctcgaactcctgacctcaggtgatctgcctgccttggcctcccaaag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213392 79 + 115148730 agacggggtttcaccatgttggccaggcaggtctcgaactcctgacctcaggtgatctgcctgcctcggcctcccaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016017 79 + 184069350 agatggggtttcaccatgttggccaggctggtcttgaattcctgacctcaggtgatctgcctgcctcggcctcccaaag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353486 79 + 189454096 agatggggtttcaccatgttggccaggctggtcttgaattcctgacctcaggtgatctgcctgcctcggcctcccaaag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175968939 79 + 178775436 agatggggtttcaccacgttggccaggctggtctcgaattcctgacctcaggtgatctgcctgcctcggcctcccaaag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811147 79 + 135778131 agatggggtttcaccatgttggccaggctggtctcgaattcctgacctcacgtgatctgcctgcctcggcctcccaaag i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15687476 73 - 59632846 I e mm10.chr8 84679871 20 - 129401213 I e calJac3.chr3 188194506 3 - 190850796 I a score=89670.000000 s hg38.chr4_KI270785v1_alt 2971 39 + 119912 tgctgggattacaggcgtgagccactgcgcctggcTGAG s panTro4.chr4 190275458 39 + 193495092 tgctgggattacaggcgtgagccactgtacctggcTGAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241078 39 + 198332218 tgctcggattacaggcgtgagccactgcgcctggctGAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213471 39 + 115148730 tgctgggattacaggcgtgagccactgtgcctggccGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016096 39 + 184069350 tgctgggattacaggcgtgagccaccgcacctggccAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353565 39 + 189454096 tgctgggattacaggcgtgagccaccgcacctggccAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969018 39 + 178775436 tgctgggattacaggcgtgagcccccacacctggccaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811226 39 + 135778131 tgctgggattacaggcgtgagccaccgcacctggccAAA i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15687549 27 - 59632846 TAGTGAGGTGATAGGCTT------------CAGAATGAA i canFam3.chr16 I 73 C 0 e mm10.chr8 84679871 20 - 129401213 I e calJac3.chr3 188194506 3 - 190850796 I a score=513576.000000 s hg38.chr4_KI270785v1_alt 3010 162 + 119912 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ACTTGATAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGTCTTCCAGGTACACCCAAAGGAATAATTCCTTTGGAGGTGAGATTTTCACCTTATGACT s panTro4.chr4 190275497 162 + 193495092 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ACTTGATAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGTCTTCCAGGTACACCCAAAGGAATAATTCCTTTGGAGGTGAGATTTTCACCTTATGACT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241117 162 + 198332218 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ACTTGATAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCCTTCCAGGTACACCCAAAGGAGTAATTCCTTTGGAGGTGAGATTTTCACCTTATGACT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213510 162 + 115148730 AAAGAACTTTTAAGAATCGGTTACTCCATGTTTTACCCTGTACTATACTTCTAG----------------ACTTGATAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCTTTCCGGGTATACCCAAAGGAATAATTCCTTTGGAGGTGAGATTTTCACCTTATGACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016135 162 + 184069350 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ATTTGAAAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCTTTCCAGGTACAACCAAAGGAATAATTTCTTTGGAGGTGAGATTTTCACCTTATGACG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353604 162 + 189454096 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ATTTGAAAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCTTTCCAGGTACAACCAAAGGAATAATTTCTTTGGAGGTGAGATTTTCACCTTATGACG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969057 162 + 178775436 aaagaACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTGTACTTCTAG----------------ATTTGAAAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCTTTCCAGGTACAACCAAAGGAATAATTTCTTTGGAGGTGAGATTTTCACCTTATGACG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811265 162 + 135778131 AAAGAACTTTTAAGAATCAGTTACTTCATATTTTACCCTATATTATACTTCTAG----------------ATTTGAAAATGTCATGTAATAAACTCCAACAATTCTTCATTTAACTTTGCTTTCCAGGTACAACCAAAGGAATAATTTCTTTGGAGGTGAGATTTTCACCTTATGACG i chlSab2.chr7 C 0 C 0 s mm10.chr8 84679891 157 - 129401213 AAAAAACATTTAAAAAATCATTCCTTAATAATTTCCCCCATGTTCTATTTCTGG----------------ATTTAATGATATAATCTAATATACTCAAATAACTC-----CTAACTTTGCTTTCCAGCTGGAAGCAAATAAATAACTTCTGTGGAGACAACATTTTGTCTTCATGAAT i mm10.chr8 I 20 I 132 s canFam3.chr16 15687576 178 - 59632846 AAATCAGTTTTAAAAATCAATTACTTAATATTTTACCCAATATTGTGCTCGTGGATGCACAATAGATATTATGTGATGGTACCACATAATAAACTCCAGCAATTCTTTATTTTACTTTGCTTTTCAAGCACGATCTAAGAAGTAATTTCTTTGCAGACAAGATGTTGGTTTTATGAAC i canFam3.chr16 C 0 C 0 e calJac3.chr3 188194506 3 - 190850796 I a score=93838.000000 s hg38.chr4_KI270785v1_alt 3172 35 + 119912 GTGGAATTTTAAAGTTCTCTGTAA------AAACATCCTAT s panTro4.chr4 190275659 35 + 193495092 GTGGAATTTTAAAGTTCTCTGTAA------AAACATCCTAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241279 35 + 198332218 GTGGAATTTTAAAGTTCTCTGTAA------AAACATCCTAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213672 35 + 115148730 GTGGAATTTTAAAGTTCTCTGTAA------AAACATCCTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016297 35 + 184069350 GTGGAATTTTAAAGTTCTCCCTAA------AAACATCCTAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353766 35 + 189454096 GTGGAATTTTAAAGTTCTCCCTAA------AAACATCCTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969219 35 + 178775436 GTGGAATTTTAAAGTTCTCCCTAA------AAACATCCTAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811427 35 + 135778131 GTGGAATTTTAAAGTTCTCCCTAA------AAACATCCTAT i chlSab2.chr7 C 0 C 0 s mm10.chr8 84680180 39 - 129401213 GTAGAAACTTAATGTTCTCTAGAATTTTTCAAAAA--CTAC i mm10.chr8 I 132 C 0 s canFam3.chr16 15687754 26 - 59632846 ATAGA---------ttttttttaa------aaagatattat i canFam3.chr16 C 0 I 473 e calJac3.chr3 188194506 3 - 190850796 I a score=69248.000000 s hg38.chr4_KI270785v1_alt 3207 31 + 119912 AGGTTGTGCAGT--------TTTGTATATT-TTTTAGGAT s panTro4.chr4 190275694 31 + 193495092 AGGTTGTGCAGT--------TTTGTATATT-TTTTAGGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241314 31 + 198332218 AGGTTGTGCAGT--------TTTGTATATT-TTTTAGGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213707 31 + 115148730 AGGTTGTGCAGT--------TTTGTGTATT-TTTTAGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016332 31 + 184069350 AGGTT-TGCAGTG-------TTTGTATATT-TTTTAGGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353801 31 + 189454096 AGGTT-TGCAGTG-------TTTGTATATT-TTTTAGGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969254 31 + 178775436 AGGTT-TGCAGTG-------TTTGTATATC-TTTTAGGAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811462 31 + 135778131 AGGTT-TGCAGTG-------TTTGTATATT-TTTTAGGAT i chlSab2.chr7 C 0 C 0 s mm10.chr8 84680219 40 - 129401213 AGGTTGTACAATGTACAATATTTGTTTATCATTTTAGTAG i mm10.chr8 C 0 C 0 e canFam3.chr16 15687780 473 - 59632846 I e calJac3.chr3 188194506 3 - 190850796 I a score=1014222.000000 s hg38.chr4_KI270785v1_alt 3238 386 + 119912 TAATTA----------------------------TTTCCAAT--------------CAAAGTATATGTAGAAAGTGTACAAAAATGTAGCCAACTTACTAATATTCTATCTTGAAGAACACTCTTATGAAGGTTATGTATTTGGTTCGTACTAGGATTAGAGCTTATGTTTGTATGTTGCCAGAGAGAGGGTGCTAT--GAGTTTT--TACACTATGGAGTTGGAAGTATAGTAATTTCATTGTATTTACCAAAGCAAAAgaagatgatgac-aatgataaagaggaagatgaagaAGGGTGGAAATAAATCAAATCTGCTAATACCTTTACTTCAGTGTGAGGATGTTTTC-----AACAAAATTCTACTTTCCAGATAATTATCTGAATTATCCACTTTAAATTGTAAGTAAATTTAATAAGTT----------GAGTTCAAATTA s panTro4.chr4 190275725 388 + 193495092 TAATTA----------------------------TTTCCAAT--------------CAAAGTATATGTAGAAAGTGTACAAAAATGTAGCCAACTTACTAATAGTCTATCTTGAAGAACACTCTTATGAAGGTTATGTATTTGGTTCGTACTAGGGTTAGAGCTTATGTTTGTATGTTGCCAGAGAGAGGGTGCTATAAGAGTTTT--TACACTATGGAGTTGGAAGTATAGTAAGTTCATTGTATTTACCAAAGCAAAAGAAGATGATGAC-AATGATAAAGAGGAAGATGAAGAAGGGTGGAAATAAATCAAATCTGCCAATACCTTTACTTCAGTGTGAGGATGTTTTC-----AACAAAATTCTACTTTCCAGATAATTATCTGAATTATCCACTTTAAATTGTAAGTAAATTTAATAAGTT----------GAGTTCAAATTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241345 397 + 198332218 TAATTA----------------------------TTTCCAATCACAAG---TACACCAAAGTATATGGAGAAAGTGTACAAAAATGTAGCCAACCTACTAATATTCTATCTTGAAGAATACTCTTATTAAGGTTATGTATTTGGTTCTTACTAGGATTAGGGCTTATGTTTGTATGTTGCCAGAGAGAGGGTGCTATAAGAGTTTT--TACACTATGGAGTTGGAAGGATAGTAAGTTCATTGTATTTACCAAAGCAAAAGAAGATGATGAC-AATGAT--AGAGGAAGATGAAGAAGGATGGAAATAAATCATATCTGCCAATACCTTTACTTCAGTGTGAGGATGTTTTC-----AGCAAAATTCTACTTTCCAGATAATTATCTGAATTATCCACTTTAAATTGTAAATAAATTTAATAAGTT----------GAGTTCAAATTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111213738 399 + 115148730 TAATTA----------------------------TTTCTGATCACAAA---TACACCAAAGTATATGTAGAAAGTGTACAAAAATGTAGCCAGCCTACTAATATTCTATCTTGAAGAATACTCTTATTAAGGTTATGTATTTGGTTCTTACTAGGATTAGGGCTTATGTTTGTATGTTGCCAGAGAGAGGGTGCTATAAGAGTTTT--TACACTATGGAGTTGGAAGGATAGTAAGTTCATTGTATTTATCAAAGCAAAAgaagatgatgac-aatgataaagaggaagatgaagaAGGATGGAAATAAATCAAATCTGCCAATACCTTTACTTCAGTGTGAGGATGTTTTC-----AGCAAAATTCTACTTTTCAGATAATTATCTGAATTATCCTCTTTAAATTGTAAATAAATTTAATAAGTT----------GAGTTCAAATTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016363 389 + 184069350 TAATTA----------------------------TTTCCAATCACAAA---TACACCAAAGTATGTGTAGAAAGTGTACAAAAATGTAGCCAACCAACTAATATTCTATATCGACGAATACTCTTATTCAGGTGATCTATTTGGTTCTTACTAGGATTAGGGCTTCTGTTTGTACGTTGCCAGAGAGAGGGTGCTGTGAGAGATTT--TACACTGTGGAGTCGGAAGGATAGTAAGTTCACTGTATTTATCAAAGCGAAAGAAGAGGATGAC-AATGATAAAGAGGAAGAT---AAAGGACGGAGATAAATCGAATCTGCCAACACCTTCACTTCAGTGGGAGGATGTTTTC-----AGCCAAATTCTACTTTCCAGACGATTATCTGA-------ACTTTAAATTGTCAATCAATTTCATAAGTT----------GAGTTCAAATTA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186353832 396 + 189454096 TAATTA----------------------------TTTCCAATCACAAA---TACACCAAAGTATGTGTAGAAAGTGTACAAAAATGTAGCCAACCTACTAATATTCTATATCAACGAATACTCTTATTCAGGTTATCTATTTGGTTCTTACTAGGATTAGGGCTTCTGTTTGTACGTTGCCAGAGAGAGGGTGCTGTGAGAGATTT--TACACTGTGGAGTCGGAAGGATAGTAAGTTCACTGTATTTATCAAAGCGAAAgaagaggatgac-gatgataaagaggaagat---ggaggacggagaTAAATCGAATCTGCCAATACCTTTACTTCAGTGGGAGGATGTTTTC-----AGCCAAATTCTACTTTCCAGACGATTATCTGAACTATCCACTTTAAATTGTCAATCAATTTCATAAGTT----------GAGTTCAAATTA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969285 396 + 178775436 TAATTA----------------------------TTTCCAATCACAAA---TACACCAAAGTATGTGTAGAAAGTGTACAAAAATGTAGCCAACCTACTAATATTCTATATTGAAGAATACTCTTATTCAGGTTATCTATTTGGTTCTTGCTAGGATTAGGGCTTATGTTTGTACGTTGCCAGAGAGAGGGTGCTGTAAGAGTTTT--TACACTGTGGAGTTGGAAGGATAGTAAGTTCACTGTATTTATCAAAGCAAAAGaagatgatgac-aatgataaaGAGGAAGAT---GAAGGATGGAAATAAATCGAATCTGCCAATACCTTTACTTCAGTGGGAGGATGTTTTC-----AGCCAAATTCTACTTTCCAGATAATTATCTGAATTATCCACTTTAAATTGTAAATCAATTTCATAAGTT----------GAGTTCAAATTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811493 398 + 135778131 TAATTA----------------------------TTTCCAATCACAAA---TACACCAAAGTATGTGTGGAAAGTGTACAAAAATGTAACCAACCTACTAATATTCTATATTGAGGAATACTCTTATTCAGGTTATCTATTTGGTT-TTACTAGGATTAGGGCTTATGTTTGTATGTTGCCAGAGAAAGAGTGCTGTAAGAGTTTT--TACACTGTGGAGTTGGAAGGAGAGTAAGTTCACTGTATTTATCAAAGCAAAAgaagatgatgac-aatgataaagaggaagatgaagaAGGATGGAAATAAATCGAATCTGCCAATACCTTTACTTCAGTGTGAAGTTGTTTTC-----AGCAAAATTCTACTTTCCAGATAATTATCTGAATTATCCACTTTAAATTGTAAATCAATTTCATAAGTT----------GAGTTCAAATTA i chlSab2.chr7 C 0 C 0 s mm10.chr8 84680259 355 - 129401213 TGGTCATGTACAGTGTGTGCTGATAGTATGCTGTTTTCCAAGCATGAACACCACGCTAAAGTATATGAAGAGTGCATAC-CAAATGTGGCCAATCAACTGAAATCCTACAACGAAGGATATTCTTACTAAAGTTATCCTTTTCGTTCTCATTAGGAGTACTGTT--------CATGTTGCCAGAGACAGA---------------------------------AAAAGAT---------------------ACAACAAAAGCTGCAGATGACTAATTATAC-------------------TCATCCTGAATCCAACCCTAAAACACCTTTACTTTATTCTGTGGACACTTTTTTAAAATCAAAACTCTACTCACTAGACG-TTATTTCCATTATTTACCTTAATCTATAAATGCATGTAACTAGTT----------GGCCATGAGTCA i mm10.chr8 C 0 C 0 s canFam3.chr16 15688253 376 - 59632846 TAATTA----------------------------TTTTCCATCTTAAG---TACATCAAAGTATATGTGGAAAGTATAT-GAAGCATAGTCAG----CTAATATTCTATACT-AAGAATATTCTTAGTAAGATTAT-TCTTTGGTTC-CATTAGGACTA--GTTTATATTGGTATGTTACTACACACA-------ATAAGTATTTTACTACACTATTGAGTTGGAAGT---GTCAACTTTTTGTAGTTATCA------------GTGATGCT-GAAGACAAAGATGAAGAT---GAAGAATGGAAATAATTCAAGTCCTCACATACCTTTACTGCAATATATGGATGTTTCT-----GGCAAATTTCTACTTCCTAGATCATTGTTTCAGTTATCCACTTAAAATTGTAAATCAGTTTAATAAGTTAAATAAATTCGAGTTCAAGGTA i canFam3.chr16 I 473 C 0 e calJac3.chr3 188194506 3 - 190850796 I a score=267413.000000 s hg38.chr4_KI270785v1_alt 3624 83 + 119912 ATGTT--TTTTAAATCAGCCACTAGG----ATAAACC--TTTTTACTTTAATATATGATTTATGCCCAGTTT-------ATTCCATGTAAAAATTTAA s panTro4.chr4 190276113 83 + 193495092 ATGGT--TTTTAAATCAGCCACTAGG----ATAAACC--TTTTTACTTTAATATATGATTTATGCCCAGTTT-------ATTCCATGTAAAAATTTAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241742 83 + 198332218 ATGTT--TTTTAAATCAGCCACTAGG----ATAAACC--TTTTTACTTTAATATATGATTTATGCCCAGTTT-------ATTCCATATAAAAATTTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214137 84 + 115148730 ATGTT--TTTTAAATCAGCCACTAGG----ATAAACC-TTTTTTACTTTAATATATGATTTATGCCCAGTTT-------ATTCCATGTAAAAATTTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016752 79 + 184069350 ATGTT--TTGTAAATCAGCCACGAGG----ATAAACC-TTTTTTACTTTAGT-----ATTTATGGCCAGTTT-------ATTCCATGTAAAAATTTAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354228 84 + 189454096 ATGTT--TTGTAAATCAGCCACGAGG----ATAAACC-TTTTTTACTTTAGTATATGATTTATGGCCAGTTT-------ATTCCATGTAAAAATTTAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969681 84 + 178775436 ATGTT--TTGTAGATCAGCCACGAGG----ATAAACC-TTTTTTACTTTAGTATATGATTTATGGCCAGTTT-------ATTCCATGTAAAAATTTAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811891 84 + 135778131 ATGTT--TTGTAAATCAGCCACGAGG----ATAAACC-TTTTTTACTTTAATATATGATTTACGGCCAGTTT-------ATTCCATGTAAAAATTTAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194509 84 - 190850796 ATGTT--TTTTAAATCAGCCACTAGG----ATACACC-ATTTATATTTTAATATATGCTTTATGCCCAGTTT-------ATTCCATGCAAAAATATAA i calJac3.chr3 I 3 C 0 s mm10.chr8 84680614 84 - 129401213 ATGTT--TTGT-TATGAACCACAAGT----ATCAAGAAACTCTTACTCTAACATATCATGTAACCACTTTTA-------ACTGTATTTAAAAATGCAA i mm10.chr8 C 0 I 645 s canFam3.chr16 15688629 96 - 59632846 ATGTTGGTTTCTTATAACCCACTGAGGCAAATAAACC--CTTTTACTCTGATCTATGTTTTTTGCCTGGTTTAATTCTAATTATATATAAAAATCTAA i canFam3.chr16 C 0 C 0 a score=601545.000000 s hg38.chr4_KI270785v1_alt 3707 170 + 119912 GTTTCTAGGC-C---AAAAAA------TGAAACTTATAACTG-CTTCCCATATAATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAATTGAACGTGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGACATGCAATGACAAATCCAATTAGCTGATTTTTCTATAGGTGAAGAAA s panTro4.chr4 190276196 170 + 193495092 GTTTCTAGGC-C---AAAAAA------TGAAACTTATAACTG-CTTCCCATAGAATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAATTGAATGTGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGACATGCAATGACAAATCCAATTAGCTGATTTTTCTATAGGTGAAGAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241825 170 + 198332218 GTTTCTAGGC-C---AAAAAA------TGAAACTTATAACTG-CTTCCCATAATATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAATTGAACATGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGACATGCAATGACAAATCCAATTAGCTGATTTTTCTATAGGTGAAAAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214221 169 + 115148730 GTTTCTAGGC-C---AAAAAA------TGAAACTTATAACTG-CTTCCCATATTATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAATTGAATGTGTT----TCTTTCCAGTTTCTATTTA-AATCTTGTGCTTATGACATGCAATGACAAATCCAATTGGCTGATTTTTCTATAGGTGAA-AAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181016831 170 + 184069350 GTCTCTAGGC-C---AAAAAA------TGAAACTTGTAACTA-CTTCTCATATAATTACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAGTTGAACGCGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGATATGCAGTGACAGATCCAATTAGCTGATTTTTCTATAGGTGAAAAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354312 170 + 189454096 GTCTCTAGGC-C---AAAAAA------TGAAACTTGTAACTA-CTTCTCATATAATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAGTTGAACGCGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGATATGCAGTGACAGATCCAATTAGCTGATTTTTCTATAGGTGAAAAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969765 170 + 178775436 GTCTCTAGGC-C---AAAAAA------TGAAACTTGTAACTA-CTTCTCATATAATCACTCTCGAAAGTGATTTCTGCT----------------------ATTTATCAGTTGAAcgcgtt----tctttccagtttgtatttA-AATCTTGTGCTTATGACATGCAGTGACAGATCCAATTAGCTGATTTTTCTATAGGTGaaaaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132811975 169 + 135778131 GTCTCTAGGC-C---AAAAAA------TGACACTTGTAACTA-CTTCTCATATAATCACTCTCAAAAGTGATTTCTGCT----------------------ATTTATCAGTTGAATGTGTT----TCTTTCCAGTTTGTATTTA-AATCTTGTGCTTATGACATGCAGTGACAGATCCAATTAGCTGATTTTTCTATAGGTG-AAAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194593 170 - 190850796 GTTTCTAGAC-CAAAAAAAAA------TGAAATGTATAACCACCCCCCCAAATAATCACTCTCAAAAGTAATTTCTGCT----------------------ATTTATCAGTTGAATGTGTT----TCTTTCCAGTTTGTATT----GTCTTGTGCTTATGACGTGCAATGACAAATTCAATTAGCTGATTTTGCTATAGGTTAA-GAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84681343 182 - 129401213 gtttctaTGCAC---ATAAAAATGGAGTGGAATTTGTACTTT-CATCCACTTCAGTCACTCTCAGAAATGGTTTATGCT----------------------ACTTATCAATTGAAAGTATTTTCCTCCCTCCAGTTGGTTTTGGCACTTCTGTGTTTATGATGTGCAAGGATAGATCAAATTAGCTAATTTTTCTACTGGTGAAAAAA i mm10.chr8 I 645 I 19 s canFam3.chr16 15688725 194 - 59632846 GCATGTAGTC-C---AAAACCC-----TGAAATTTGCCATTG-TTTCTTATATCATCACTCTCAAAAATGTTTTATTTCACTCTCAAAAATGTTTTATTAGATTTATCAATTATAAGTGTT----CATTTGCAGTTTATATTTGTAAAACTGGGTTTATGAAATGTAATGAGAAATGCATTAAGCTAATTTTTCTATATACAAGAAAA i canFam3.chr16 C 0 C 0 a score=40400.000000 s hg38.chr4_KI270785v1_alt 3877 15 + 119912 ACCCTGGTTACTTCC s panTro4.chr4 190276366 15 + 193495092 ACCCTGGTTACTTCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195241995 15 + 198332218 ACCCTGGTTACTTCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214390 15 + 115148730 ACCCTGGTTACTTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017001 15 + 184069350 ATCTTGGTTACTTCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354482 15 + 189454096 ACCTTGGTTACTTCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969935 15 + 178775436 aCCTTggttacttcc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812144 15 + 135778131 ACCTTGGTTACTTCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194763 15 - 190850796 ACGCTGGTTAATTCC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15688919 4 - 59632846 ACCT----------- i canFam3.chr16 C 0 C 0 e mm10.chr8 84681525 19 - 129401213 I a score=352175.000000 s hg38.chr4_KI270785v1_alt 3892 119 + 119912 AACTATGTGG-ATGATATGTTAGTGCAATTTGTCTCAACA------AAAATGGCAAAAAAGAAAACAGCCTTCTGAGTAGAGTAGAATACTTTTATTTGGTAGTTGCTGACCTGCCTTTATAGTTT---------------------------------- s panTro4.chr4 190276381 119 + 193495092 AACTATGTGG-ATGATATGTTAGTGCCATTTGTCTCAACA------AAAATGGCAAAAAAGAAAACAGCCTTCTGAGTAGAGTAGAATACTTTTATTTGGTAGTTGCTGACCTGCCTTTATAGTTT---------------------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242010 119 + 198332218 AACCATGTGG-ATGATATGTTAGTGCAATTTATCTCAACA------AAAATGGCAAAAAAGAAAACAGCCTTCTGAGTAGAGTAGAATACTTTTATTTGGTAGTTGCTGACCTGCCTTTATAGTTT---------------------------------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214405 119 + 115148730 AACTATGTGG-ATGTTATGTTAGTGCAATTTATCTCAACA------AAAATGGCAAAAAAGAAAACAGTCTTCTGAGTAGAGTAGAATACTTTTATTTGGTAGTTACTGACCTGCCTTTATAGTTT---------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017016 114 + 184069350 AACTATGTGG-ATGATATGTTAGTGCAATTTATCTCAACA------AAAATGGCCAAAAAGAAAACAGCCTTCT-----GAATAGAATACTTTTATTTGGTAGTTGCTGACCTGCCTTTGTAGTTC---------------------------------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354497 114 + 189454096 AACTATGTGG-ATGATATGTTAGTGCAATTTATCTCAACA------AAAATGGCCAAAAAGAAAACAGCCTTCT-----GAGTAGAATACTTTTATTTGGTAGTTGCTGACCTGCCTTTATAGTTC---------------------------------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175969950 115 + 178775436 aactatgtggaaTGATATGTTAGTGCAATTTATCTcaaca------aaaatggcaaaaaagaaaacagccttCT-----GAGTAGAATACTTTTATTTGATAGTTGCTGACCTGCCTTTATAGTTC---------------------------------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812159 114 + 135778131 AACTATGTGG-ATCATATGTTAGTGCAATTTATCTCAACA------AAAATGGCAAAAAAGAAAACAGCCTTCT-----GAGTAGAATACTTTTATTTGGTAGTTGCTGACTTGCCTTTATAGTTC---------------------------------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194778 116 - 190850796 AACTGTGTGA-ATGGTGTGCTGGTGCAGCTTATCC--ACA------GAAATGGCAAAAAAGGAAATGGCCTTCTGAGCAGAGTAGAATACTTTCATCTGGTAGTTCCTGATCTGCCTTTATA-TTA---------------------------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84681544 97 - 129401213 AACAACAACA-ACAAAAAACTCCTGCAACTTATCTGACCAGTCTTCGAAGTGGCAAAAATG------GTCTTAT-----GAATAGAA-----------------GGCTGGTCTACCTTTCTCTGTA---------------------------------- i mm10.chr8 I 19 C 0 s canFam3.chr16 15688923 131 - 59632846 -----------------TGTTAGTGTGATTTATCT-AACA------TGAATTGCAAAAAGCAAAATGGTTTCAA-----GAGTAGAACACTCTGATTTGGTAGTTGCTGATCTGTCTTTATATTTAACATTACCgggatccctgggtggcgcagcggttt i canFam3.chr16 C 0 I 173 a score=169419.000000 s hg38.chr4_KI270785v1_alt 4011 55 + 119912 ACATCACCTTTTACTTAGGTTTGTGACTTGACAGATAGTGAACCT---GAGAGAGAGA s panTro4.chr4 190276500 55 + 193495092 ACATCACCTTTTACTTAGGTTTGTGACTTGACAGATAGTGAACCT---GAGAGAGAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242129 55 + 198332218 ACATCACTTTTTACTTAGGTTTGTGACTTGACAGATAGTGAACCT---GAGAGAGAGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214524 49 + 115148730 ACATC------TACTTAGGTCTGTGACTTGACAGACAGTGAACCT---GAGAGAGAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017130 58 + 184069350 ACATCACCTTTTAGTTAGGTTTGTGACTTGACAGATAGTGAACTTAGAGAGAGAAAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354611 58 + 189454096 ACATCACCTTTTAGTTAGGTTTGTGACTTGACAGATAGTGAACTTAGAGAGAGAAAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970065 58 + 178775436 ACATCACCTTTTAGTTAGGTTTGTGACGTGACAGATAGTGAacttagagagagaaaga i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812273 58 + 135778131 ACATCACCTTTTAGTTAGGTTTGTGACTTGACAGATAGTGAACTTAGAGAGAGAAAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194894 54 - 190850796 ACATAACCTT-TATTCAGCTTTGTGGCTTGATAGATAGTGAACCT---gagtgagaga i calJac3.chr3 C 0 C 0 s mm10.chr8 84681641 55 - 129401213 ATGTAACCATTACTTTTGGATAATAGCTTGACAGATAGTTAACCA---AAAAGATAGA i mm10.chr8 C 0 I 848 s canFam3.chr16 15689227 54 - 59632846 ACATTACCTTTCCTTTGAGTTTGTGGGTTGGCAGATACTTATACT---GGGACATAG- i canFam3.chr16 I 173 C 0 a score=22456.000000 s hg38.chr4_KI270785v1_alt 4066 7 + 119912 GAGGGAG s panTro4.chr4 190276555 7 + 193495092 GAGGGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242184 7 + 198332218 GAGGGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214573 7 + 115148730 GAGGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017188 7 + 184069350 GAGGGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354669 7 + 189454096 GAGGGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970123 7 + 178775436 gagggag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812331 7 + 135778131 GAAGGAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188194948 7 - 190850796 gagagag i calJac3.chr3 C 0 I 49 e canFam3.chr16 15689281 0 - 59632846 C e mm10.chr8 84681696 848 - 129401213 I a score=94444.000000 s hg38.chr4_KI270785v1_alt 4073 35 + 119912 CAGGCAACAAGGCAGCAGATTCCAC-------CTTTTATCTC s panTro4.chr4 190276562 35 + 193495092 CAGGCAACAAGGCAGCAGATTCCAC-------CTTTTATCTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242191 35 + 198332218 CAGGCAACAAGGCAGCAGATTCCAC-------CTTTTATCTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214580 35 + 115148730 CAGGCAACAAGGCAACAGATTCCAC-------CTTTTATCTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017195 35 + 184069350 CAGGCAACAAGGCAACAGATTCAAC-------CTTTTATCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354676 35 + 189454096 CAGGCAACAAGGCAACAGATTCAAC-------CTTTTATCTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970130 35 + 178775436 caGGCAACAAGGCAACAGATTCAAC-------CTTTTATCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812338 35 + 135778131 CAGGCAACAAGGCAACAGATTCAAC-------CTTTTATCTC i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15689281 36 - 59632846 ------ATTAGACAGTAGATTCCACTGAACAACTTTTATTTC i canFam3.chr16 C 0 C 0 e mm10.chr8 84681696 848 - 129401213 I e calJac3.chr3 188194955 49 - 190850796 I a score=106687.000000 s hg38.chr4_KI270785v1_alt 4108 35 + 119912 AGGCCACAAATGTGTCATTCCGC-TTTTTAA-AAATG s panTro4.chr4 190276597 35 + 193495092 AGGCCACAAATGTGTCATTCCGC-TTTTTAA-AAATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242226 35 + 198332218 AGGCCACAAATGTGTCATCAGGC-TTTTTAA-AAATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214615 36 + 115148730 AGGCCACAAATGTGTCATCAGGC-TTTTTCATAAATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017230 36 + 184069350 AGGCCACAAATGTGTCATCAGGC-TTTTTCATAAATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354711 36 + 189454096 AGGCCACAAATGTGTCATCAGGC-TTTTTCATAAATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970165 36 + 178775436 AGGCCACAAATGTGTCATCAGGC-TTTTTCATAAATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812373 36 + 135778131 AGGCCACAAATGTGTCATCAGGC-TTTTTCATAAATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188195004 36 - 190850796 AGGCCACAAGTATTTCATCAGAC-TTCTTCATAAATG i calJac3.chr3 I 49 C 0 s canFam3.chr16 15689317 37 - 59632846 AGTCTACAAACATTCCATAAGGCTTTTTTCATTAATG i canFam3.chr16 C 0 C 0 e mm10.chr8 84681696 848 - 129401213 I a score=1021212.000000 s hg38.chr4_KI270785v1_alt 4143 300 + 119912 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGCC-AAAGAAGTACAATGCCAGTGTTGGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCGTAATTTTTATTGACAGAAAGGAATATAGGTAGTTAGAATAAATTTTAAATTTTGGTATGAAGTTTTCGATGG---GAT--TTAGAATGCAGTTTTTGTCTCTGCAAAAAGACTTTGGGCTGAATTACACATACTATTTTTAGATCCTCGTTTGAACAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGAAAAAAGTTTGTGCA s panTro4.chr4 190276632 300 + 193495092 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGCC-AAAGAAGTACAATGCCAGTGTTGGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCGTAACTTTTATTGACAGAAAGCAATATAGGTAGTTAGAATAAATTTTAAATTTTGGTATGAAGTTTTCGATGG---GAT--TTAGAATGCAGTTTTTGTCTCTGCAAAAAGACTTTGGGCTGAATTACACACACTATTTTTAGATCCTCGTTTGAACAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGAAAAAAGTTtgtgca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242261 295 + 198332218 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGCC-AAAGAAGTACAACGCCAGTGTTGGAAACAATTCCAATTTTTATTCAAATCATTGG---TTGCAAGAGCATAATTTTTATTGACAGAAAGCAATATAGGTAATTAGAATAAATTTTAAATTTTGGTATGAAGTTTTCGATGG---GAT--TTAGAATGCAGTTTTTGTCTCTGC-AAAAGACTTTGGGCTGAATTACACATACTATTTTTAGATCCTTGTTTGAACAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGAAAAAA----gtgca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214651 299 + 115148730 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGCC-AAAGAAGTACAATGCCAGTGTTGGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCATAATTTTTATTGACAGAAAGCAATATATGTAGTTAGAATAAATTTTAAATTTTGGTATGAAGTTTTCGTTGG---GAT--TTGGAATGCAGTTTTTACCTCTGC-AAAAGACTTTGGGCTGAATTACACATACTATTTTTAGATCCTTGTTTGAACAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGAAAAAAgtttgtgca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017266 298 + 184069350 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGTC-AAAGAAGTACAATGCCAGTGTTAGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCATAGCTTTTATTAA-AAAAAGCAATACAAGTAGTTAGAATAAATTTTACATTTTGGTATGAAATTTTCATTGG---GAT--TTAGAATGCAATTTTTGCCTCTGC-AAAAAAGTTTGGGCTGAATTACACATACCATTTTTAGATCCTTGTTTGAGCAGAAAAGATTGTTA--CTTGGCTGACT-------TATTACTGGAAAAAGTTTGTGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186354747 298 + 189454096 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGTC-AAAGAAGTACAATGCCAGTGTTAGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCATAGCTTTTATTAA-AAAAAGCAATACAAGTAGTTAGAATAAATTTTACATTTTGGTATGAAATTTTCATTGG---GAT--TTAGAATGCAATTTTTGCCTCTGC-AAAAAAGTTTGGGCTGAATTACACATACCATTTTTAGATCCTTGTTTGAGCAGAAAAGATTGTTA--CTTGGCTGACT-------CATTACTGGAAAAAGTTTGTGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970201 298 + 178775436 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGTC-AAAGAAGTACAATACCAGTGTTAGAAACAATTCcaatttttattcaaattattga---TTGCAAGAGCatagcttttattaa-aaaaagcaATACAGGTAGTTagaataaattttacattttggtatgaAATTTTCATTGG---GAT--TTAGAATGCAATTTTTGCCTCTGC-AAAAAAGTTTGGGCTGAATTACACATACCATTTTTAGATCCTTGTTTGAGCAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGGAAaaagtttgtgca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812409 298 + 135778131 CCTGTTTCATTTTGGTGAAACTTCTGATAAAAGTC-AAAGAAGTACAATGCCAGTGTTAGAAACAATTCCAATTTTTATTCAAATTATTGA---TTGCAAGAGCATAGCTTTTATTAA-AAAAAACAATACAGGTAGTTAGAATAAATTTTACATTTTGGCATGAAATTTTCATTGG---GAT--TTAGAATGCAATTTTTGCCTCTGC-AAAAAAGTTTGGGCTGAATTACACATACCATTTTTAGATCCTTGTTTGAACAGAAAAGATTGTTA--CTTGGCTGACT-------CATTATTGGAAAAAgtttgtgca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188195040 299 - 190850796 -CTATTTCATTTTGGTGAAACTTCTGGTAAAAGCCAAAAGAAGCACAATGCCAGTGTTAGAATCAATTCCAGTGTTTACTCAAATTGTTGA---TTTCAAGAGCATTCCTGTTGTTAAAAGGAAGCAGTGTGCATAGCTGGAGTAAGTTTGAAATTTTGGTATGAAGTTTTCATCGG---GAT--TTAGAATGCCATTTTTGCCTCTGT-GGAAGACTTTGGGCTGAATTACATGCACTGTTTTTAGATCCTTGTTTGAACAGAAAAGATTGTTA--CTTGGATGACT-------CATTAGTGAAAAACATTtgtgca i calJac3.chr3 C 0 C 0 s mm10.chr8 84682544 236 - 129401213 cTTATTTCATTTTGATAAAATATCTAGTAGAAATA-AGAGAAATGC-------------------------------------------------------------------------AAAAAGTCATAGAGGttattaaaattaaatttaaaattatGTGGAGACTTTTCA-TGA---GATGATTTCAATGTGATTTTTCACTCTGG-GAAAAAGTCTGATATGAATGATATGGC---TTTACAACCCTTCATCTGAACAGAAAATAAAATTGGCTTTGGCTGACCTATTTGGTATTATTGAAGAGTATCtgttgg i mm10.chr8 I 848 C 0 s canFam3.chr16 15689354 299 - 59632846 CTTGTTTCATTTTGATGAAACTGCTGATAAAGGCA-AAAGAAATTCAATGATGGCATTACAAAGAATTTCAATTTTTATTCAAATTATTGATTTTTTTAAGAGTATGACTTTTATTAA-AAGAAAGATTACAGGTAGTTAGAATAAACTTG-------GGTGTGAATTTTTCATTGGGGTGAT--TGAGAATGTGATTCTTAACTCTCC-TCAAGACTTTGAGCTGAATCACACATATTCTTTTCAATGTCTCATTTGAACAGAAAAAAAGATTGGTCTTGGCTGATC-------CATTATTGAAAAAAGTTtgtgtg i canFam3.chr16 C 0 C 0 a score=2997.000000 s hg38.chr4_KI270785v1_alt 4443 1 + 119912 T s panTro4.chr4 190276932 1 + 193495092 t i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242556 1 + 198332218 t i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214950 1 + 115148730 t i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355045 1 + 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970499 1 + 178775436 t i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812707 1 + 135778131 t i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188195339 1 - 190850796 t i calJac3.chr3 C 0 C 0 s mm10.chr8 84682780 1 - 129401213 t i mm10.chr8 C 0 I 1 s canFam3.chr16 15689653 1 - 59632846 t i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181017564 0 + 184069350 C a score=12612.000000 s hg38.chr4_KI270785v1_alt 4444 10 + 119912 GTTTGTGTGT s panTro4.chr4 190276933 10 + 193495092 gtttgtgtgt i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111214951 10 + 115148730 gtgtgtgtat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355046 10 + 189454096 gtgtgtgtat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970500 10 + 178775436 gtgtgtgtat i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188195340 10 - 190850796 gtctgtgcgt i calJac3.chr3 C 0 C 0 s mm10.chr8 84682782 8 - 129401213 ttctgtct-- i mm10.chr8 I 1 C 0 s canFam3.chr16 15689654 10 - 59632846 gtgtgtgtgt i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132812708 0 + 135778131 C e rheMac3.chr5 181017564 0 + 184069350 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=5325.000000 s hg38.chr4_KI270785v1_alt 4454 3 + 119912 GTG s panTro4.chr4 190276943 3 + 193495092 gtg i panTro4.chr4 C 0 C 0 s macFas5.chr5 186355056 3 + 189454096 gtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970510 3 + 178775436 gtg i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188195350 3 - 190850796 gtg i calJac3.chr3 C 0 C 0 s mm10.chr8 84682790 3 - 129401213 gta i mm10.chr8 C 0 C 0 s canFam3.chr16 15689664 3 - 59632846 gtg i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132812708 0 + 135778131 C e rheMac3.chr5 181017564 0 + 184069350 C e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=845.000000 s hg38.chr4_KI270785v1_alt 4457 1 + 119912 C s panTro4.chr4 190276946 1 + 193495092 c i panTro4.chr4 C 0 C 0 s macFas5.chr5 186355059 1 + 189454096 c i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970513 1 + 178775436 c i papAnu2.chr5 C 0 C 0 s mm10.chr8 84682793 1 - 129401213 c i mm10.chr8 C 0 I 2146 s canFam3.chr16 15689667 1 - 59632846 t i canFam3.chr16 C 0 C 0 e calJac3.chr3 188195353 0 - 190850796 C e chlSab2.chr7 132812708 0 + 135778131 C e rheMac3.chr5 181017564 0 + 184069350 C e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=14026.000000 s hg38.chr4_KI270785v1_alt 4458 20 + 119912 ATGTTTGTGTGtgtg--tgcat s panTro4.chr4 190276947 22 + 193495092 atgtttgtgtgtgtgcatgttt i panTro4.chr4 C 0 C 0 s macFas5.chr5 186355060 20 + 189454096 atgtttgtgtgtgtg--tgtgt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970514 20 + 178775436 atgtttgtgtgtgtg--tgtgt i papAnu2.chr5 C 0 C 0 s canFam3.chr16 15689668 20 - 59632846 gtgtgtgtgtgtgtg--tgtgt i canFam3.chr16 C 0 C 0 e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e chlSab2.chr7 132812708 0 + 135778131 C e rheMac3.chr5 181017564 0 + 184069350 C e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=1146.000000 s hg38.chr4_KI270785v1_alt 4478 2 + 119912 gt s panTro4.chr4 190276969 2 + 193495092 gt i panTro4.chr4 C 0 C 0 s macFas5.chr5 186355080 2 + 189454096 gt i macFas5.chr5 C 0 I 1 s papAnu2.chr5 175970534 2 + 178775436 gt i papAnu2.chr5 C 0 I 1 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e chlSab2.chr7 132812708 0 + 135778131 C e rheMac3.chr5 181017564 0 + 184069350 C e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=16247.000000 s hg38.chr4_KI270785v1_alt 4480 249 + 119912 ttgtgtgcatgtttgtgtg----cgtttgtgtgtgcgtgtttgtgtgtgcatgtttgtgtatgtgcatgtgta--tgtttgcatgtttgtgtgtctgcatgtgtgtg--tgcatgtttgtgcatgtttgtgtgtgtgcatgtttgtgtgtatgtgcatgtgtgtgtgcatgtt------------tgtgtgtgcatgtgtgtgcatgtttgtgtgTGTGCATGTTTG----------TGTGTGTGCATGTTTGTGTGTGTGCATGTTTGTGTGTCTGTG s panTro4.chr4 190276971 273 + 193495092 gtgtgtgcatgtttgtgtgtgcatgtttgtgtgtgc--gtttctgtgtgcgtgtttgtgtgtgtgcatgtgtatgtgtgtgcatgtttgtgtgtctgcatgtgtgtgcatgtttgtgtgtgcatgtttgtgtgtgttcatgtttgtgtgcatgtt--tgtgtgtgtgcatgtttgtgtgtgtgcatgtgtgtgcatgtgtgtgcatgtttgtgtgtctgcatgtgtgtgtgcatgtttgtgtgtgcatgtt--tgtgtgtgcatgtttgtgtgtctgtg i panTro4.chr4 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e chlSab2.chr7 132812708 0 + 135778131 C e papAnu2.chr5 175970536 1 + 178775436 I e macFas5.chr5 186355082 1 + 189454096 I e rheMac3.chr5 181017564 0 + 184069350 C e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=300.000000 s hg38.chr4_KI270785v1_alt 4729 1 + 119912 C s panTro4.chr4 190277244 1 + 193495092 c i panTro4.chr4 C 0 I 2 s rheMac3.chr5 181017564 1 + 184069350 C i rheMac3.chr5 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e chlSab2.chr7 132812708 0 + 135778131 C e papAnu2.chr5 175970536 1 + 178775436 I e macFas5.chr5 186355082 1 + 189454096 I e nomLeu3.chr7b 111214961 0 + 115148730 C e ponAbe2.chr4 195242557 0 + 198332218 C a score=7287.000000 s hg38.chr4_KI270785v1_alt 4730 10 + 119912 GTGTGTGTGT s panTro4.chr4 190277247 10 + 193495092 gtgtgtgtgt i panTro4.chr4 I 2 C 0 s ponAbe2.chr4 195242557 10 + 198332218 gtgtgtgtat i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181017565 10 + 184069350 gtgtgtgtat i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132812708 10 + 135778131 gtgtgttttt i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e papAnu2.chr5 175970536 1 + 178775436 I e macFas5.chr5 186355082 1 + 189454096 I e nomLeu3.chr7b 111214961 0 + 115148730 C a score=7230.000000 s hg38.chr4_KI270785v1_alt 4740 5 + 119912 GTGCA s panTro4.chr4 190277257 5 + 193495092 gtgca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242567 5 + 198332218 gtgca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214961 5 + 115148730 gtgca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017575 5 + 184069350 gtgca i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132812718 5 + 135778131 gtgca i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188195353 0 - 190850796 C e papAnu2.chr5 175970536 1 + 178775436 I e macFas5.chr5 186355082 1 + 189454096 I a score=33280.000000 s hg38.chr4_KI270785v1_alt 4745 18 + 119912 TGTTTGTGTGTGTGTGTA s panTro4.chr4 190277262 18 + 193495092 tgtttgtgtgtgtgtgTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242572 18 + 198332218 tgtttgtgtgtgtgtgtA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214966 18 + 115148730 tgtttgtgtgtgtgtgtA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017580 18 + 184069350 tgtttgtgtgtgtgtgtg i rheMac3.chr5 C 0 I 6 s chlSab2.chr7 132812723 18 + 135778131 tgtttgtgtgtgtgtgtg i chlSab2.chr7 C 0 I 2 s calJac3.chr3 188195353 18 - 190850796 tgtgtgtgtgtgtgtgtA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I e papAnu2.chr5 175970536 1 + 178775436 I e macFas5.chr5 186355082 1 + 189454096 I a score=107612.000000 s hg38.chr4_KI270785v1_alt 4763 34 + 119912 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA s panTro4.chr4 190277280 34 + 193495092 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242590 34 + 198332218 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111214984 34 + 115148730 CTTTTGGACACTGGCATATCTCTC----TCTCTTTACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017604 34 + 184069350 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA i rheMac3.chr5 I 6 C 0 s macFas5.chr5 186355083 34 + 189454096 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA i macFas5.chr5 I 1 C 0 s papAnu2.chr5 175970537 34 + 178775436 cttttggACACTGGCACATCTCTC----TCTCTTAACA i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132812743 34 + 135778131 CTTTTGGACACTGGCACATCTCTC----TCTCTTTACA i chlSab2.chr7 I 2 C 0 s calJac3.chr3 188195371 38 - 190850796 CTTTTGGACACTGGCACTTCTCTCTCTTTCTCTTTACA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15689688 0 - 59632846 C e mm10.chr8 84682794 2146 - 129401213 I a score=304734.000000 s hg38.chr4_KI270785v1_alt 4797 91 + 119912 AGCTTCTAGGCCTTAGAACAGGAAAATTCACTTTCTCTATTCT--ATGATTGATTTGGTACCTACCAGTAGAAAAGTGGAATATGATCCTGAT s panTro4.chr4 190277314 91 + 193495092 AGCTTCTAGGCCCTAGAACAGGAAAATTCACTTTCTCTATTCT--ATAATTGATTTGGTAGCTACCAGTAGAAAAGTGGAATATGATCCTGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242624 91 + 198332218 AGCTTCTAGGCCCTAGAACAGGAAAATTCACTTTCTGTATTCA--ATAATTGATTTGGTACCTACCGGTAGAAAAGTGGAATATGATCCTGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215018 91 + 115148730 AGCTTCTAGGCCCTAGAACAGGAAAATTCACTTTTTCTATTCT--ATAAATGATTTGGTACCTACCGGTAGAAAAGTGGAATATGATCCTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017638 91 + 184069350 AGCTTTTAGGCCCCGGAACAGGAAAATTCACTTTCTCTATTCT--ATGATTGATTTGGTACCTATCAGTAGAAAAGTAGAATATGATCCTGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186355117 91 + 189454096 AGCTTTTAGGCCCCGGAACAGGAAAATTCACTTTCTCTATTCT--ATGATTGATTTGGTACCTATCGGTAGAAAAGTAGAATATGATCCTGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175970571 91 + 178775436 AGCTTTTAGGCCCCGGAACAGGAAAATTCACTTTCTCTATTCT--ATGATTGATTTGGTACCTATCGGTAGAAAAGTAGAATATGATCCTGAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132812777 91 + 135778131 AGCTTTTAGGCCTCGGAACAGGAAAATTCACTTTCTCTATTCT--ATGATTGATTTGGTACCTACCAGTAGAATAGTAGAATATGATCCTGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188195409 89 - 190850796 AGCTTCTAGGCCCTAGAACAGGAAAACTCAC--CCTCCATTCC--ATGATTGATTTGGTACCTACCGGGAGAAAAGTGGCAGATGATCCTGAT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15689688 91 - 59632846 AGCTTCTAGCCTTCAGGACTGGAAAATTCACTCTCCCTATTCTAAATGAATGATTTAGTTCCTACCCATAGA--GGTGGAATACAATCCCCAT i canFam3.chr16 C 0 I 1091 e mm10.chr8 84682794 2146 - 129401213 I a score=739440.000000 s hg38.chr4_KI270785v1_alt 4888 267 + 119912 TGTTTATCCAGATGcagttgacgattgaacaacacagatgtgaactgtgtgggtgcactcataggcagaca-ttttcaataaatatattggaaagttttttggagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaaattaagaaaaagttacatcattaatgcataaaatatatgtacatactaatctatttatgtgttaatcaattacattattggtaaggcttccagtcaatagtag s panTro4.chr4 190277405 263 + 193495092 TGTTTATCCAGATGcagttgacgattgaacaacacagatgtgaactgtgtgagtccactcataggcagaca-ttttcaatacatatattggaaagttttttgaagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaaattaagaaaaagttacatcattaatgcataaaatatatgtacatactagactatttatgtgtt----aattacattattggtaaggcttccagtcaatagtag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242715 266 + 198332218 TGTATATCCATATGcagttgaccattgaaccacacaaatttggactgtgtgggtccactcataggcagaca-ttttcaataaatatattggaaaattttttggagatttgtgacaatttg-aaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaaatttagaaaaagttatgtcatgaatgcataaaatgtatgtacatactagtctatttatgtgttaatcaattacattattggtaaggcttccagtcaatagtag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215109 267 + 115148730 TGTATATCCATAGGcagttgaccattgaacaacacaaatttgaactgtgtgggtccactcataggcagaca-ttttcaataaatatattggaaatttttttggagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaaattaagaaaaagttacatcattaatgcataaaatatatgtacatactagtctatttatgtgttaatcaattacattattggtaaggcttccagtcaatagtag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181017729 268 + 184069350 TGTATATCCATATGcagttgatcactgaataacacaaatttgaactgtgtgggtccactcataggcagacatttttcattaaatatattggaaaattttttggagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaatttaagaaaaagttacatcatgaatgcataaaatatatgtacacactagtctatttatgtgttaatcaactatgttattggtaaggcttccagtcaatagtag i rheMac3.chr5 C 0 M 1491 s macFas5.chr5 186355208 268 + 189454096 TGTATATCCATATGcagttgatcactgaataacacaaatttgaactgtgtgggtccactcataggcagacatttttcattaaatatattggaaaattttttggagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaatttaagaaaaagttacatcatgaatgcataaaatatatgtacacactagtctatttatgtgttaatcaactacgttattggtaaggcttccagtcaatagtag i macFas5.chr5 C 0 I 2 s papAnu2.chr5 175970662 266 + 178775436 TGTATATCCATATGCAGTTGATCACTGAATAACACAAATTTGAACC-TGTGGGTCCACTCATAGGCAgacatttttcattaaatatattggaaaattttttggagatttgtgacaatttgaaaaaaacttGCAGATGAATCATGTAGCCTAGGAATactgaaaaatttaagaaaaagttacATCATGAATGcgtaaaatatatgtacacactaGTCTATTTATGTGTTAATCAACTacgttattggtaaggcttccagtc-ataGTAG i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132812868 268 + 135778131 CGTATATCCATATGcagttgatcactgaataacacaaatttgagctgtgtgggtccactcataggcagacatttttcattaaatatattggaaatttttttggagatttgtgacaatttgaaaaaaacttgcagatgaatcatgtagcctaggaatactgaaaaatttaagaaacagttacatcatgaatgcataaaatatatgtacacactagtctatttatgtgttaatcaactatgttattggtaaggcttccagtcaatagtag i chlSab2.chr7 C 0 I 2 s calJac3.chr3 188195498 232 - 190850796 TATATATCCTTATGGGgttgaccattgaacaacaccaatttcaactgtgtgggtccactcataggcagaca-----------------------------------tttgtgacactttg-aaaaaacttgcagatgaatcatgtagtctaggaaaactgaaaaagttaagaaacagttatgtcatgaatgcataaaatatgtgtacatactagtctacttCtgtgttaatcaactacatgattagtaaggctttcgatctatagtag i calJac3.chr3 C 0 C 0 e canFam3.chr16 15689779 1091 - 59632846 I e mm10.chr8 84682794 2146 - 129401213 I a score=291909.000000 s hg38.chr4_KI270785v1_alt 5155 141 + 119912 gttattagtaagtaacttttttgggagtccaaagtgataggctgatttctgactgcatgggggttggggcgccagcgcctgctttgttcaagggtcaactgGAaatatatatata-----t-----------------------tttgtatctgtactacataca----tatt s panTro4.chr4 190277668 141 + 193495092 gttattagtaagtaacttttttgggagtccaaagtgataggctgatttctgactgcatgggggttggggcgccagcgcctgctttgttcaagggtcaactgtaaatatatatata-----t-----------------------tttgtatctatactacgtaca----tatt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195242981 145 + 198332218 gttattagtaagtaacttttttgggagtccaaagttatgggttgatttttcactgcatgggggttggggccccaatgcctgctttgttcaagggtcaacAGTAAatatatatata-----t-----------------------tttgtatctatactacatatatatttatt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215376 146 + 115148730 gttattagtaagtaacttttttgggagtccaaagttataggttgatttttgactgcatgggggttggggcaccaacacctgctttgttcaagggtcaactgtaaatatatatatatatatt-----------------------tttttatctatcctacataga----tatt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355478 141 + 189454096 gttattagtaagtcaattttttgggagtacaaagttagaggttgatttttgactgcatgggggttggtgccccaacgcctgctttgttcaagggtcaactgtaaatatatatata-----t-----------------------tttgtatctgtactacatata----tatt i macFas5.chr5 I 2 I 4 s papAnu2.chr5 175970930 141 + 178775436 GTTATTAGTAAGTCACTTTTTTGGGAGTACAAAGTTAGAGGTTGATTTTTGACTGCATGGGGGTTGGTGCCCCAACGCCTGctttgttcaagggtcaactgtaaatatatatata-----t-----------------------tttgtatttgtactacatata----tatt i papAnu2.chr5 I 2 I 4 s chlSab2.chr7 132813138 141 + 135778131 gttattagtaagtcacttttttgggagtacaaagttagaggttgatttttgactgcatgggggttggtgccccaacgcctgctttgttcaagggtcaactgTAAATACATATATA-----T-----------------------TTTGTATCTGTACTACATATA----TATT i chlSab2.chr7 I 2 I 618 s calJac3.chr3 188195730 163 - 190850796 gttcttagtaagtaacctttttgggagtcaaaatttataggttgatttttgagtgcatggtggttggtgccccaactcctgctttgttcaagggtcatatacatacatatatata-----tatatatatatatatatatatacatttatata-atactacatata----tatt i calJac3.chr3 C 0 I 18 e canFam3.chr16 15689779 1091 - 59632846 I e mm10.chr8 84682794 2146 - 129401213 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=36716.000000 s hg38.chr4_KI270785v1_alt 5296 47 + 119912 atatatg-caaaac----------------atat----------------aattacataata-tataatatgtcat-atata s panTro4.chr4 190277809 47 + 193495092 atatatg-caaaac----------------atat----------------aattacataata-tataatatgtcat-atata i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243126 62 + 198332218 atatatg-tataacatatattacataacatatat----------------aattacataata-tataatatgtcat--cata i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215522 56 + 115148730 atacatg-tataacatatattatataac--atat----------------aattacataat------atatgtcat-atata i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355623 52 + 189454096 atatatg-tataacatataacat-------atat----------------aattacataata------tatgtcatcatata i macFas5.chr5 I 4 I 23 s papAnu2.chr5 175971075 55 + 178775436 atgtatg-tatgacatataacat-------atat----------------aattacataata-tat--tatgtcatcatata i papAnu2.chr5 I 4 I 1710 s calJac3.chr3 188195911 79 - 190850796 ATatgtgatataatatacataacataat--atgttatcatttataacgtaaattatatatcactatatgatgttat-ttata i calJac3.chr3 I 18 C 0 e canFam3.chr16 15689779 1091 - 59632846 I e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132813279 618 + 135778131 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=30469.000000 s hg38.chr4_KI270785v1_alt 5343 30 + 119912 atataca------acatatgtattatatataaacaa s panTro4.chr4 190277856 30 + 193495092 atataca------acatatgtattatatataaacaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243188 30 + 198332218 taataca------acatatgtgttatatataaataa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215578 30 + 115148730 atataca------acatatgtattatatataaacag i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355698 36 + 189454096 atatataatatgtatatatgtattatatataaacag i macFas5.chr5 I 23 C 0 s calJac3.chr3 188195990 30 - 190850796 atctata------atatatgtactatatataaacaa i calJac3.chr3 C 0 C 0 e canFam3.chr16 15689779 1091 - 59632846 I e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132813279 618 + 135778131 I e papAnu2.chr5 175971130 1710 + 178775436 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=2194.000000 s hg38.chr4_KI270785v1_alt 5373 7 + 119912 tatGT-----GT s panTro4.chr4 190277886 7 + 193495092 tatgt-----gt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243218 12 + 198332218 tatatatataAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215608 12 + 115148730 tgtatatataat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355734 7 + 189454096 catat-----at i macFas5.chr5 C 0 I 5 s calJac3.chr3 188196020 7 - 190850796 tatat-----at i calJac3.chr3 C 0 C 0 s canFam3.chr16 15690870 7 - 59632846 TATAG-----TT i canFam3.chr16 I 1091 C 0 e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132813279 618 + 135778131 I e papAnu2.chr5 175971130 1710 + 178775436 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=2548.000000 s hg38.chr4_KI270785v1_alt 5380 1 + 119912 A s panTro4.chr4 190277893 1 + 193495092 a i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243230 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215620 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355746 1 + 189454096 a i macFas5.chr5 I 5 C 0 s papAnu2.chr5 175972840 1 + 178775436 A i papAnu2.chr5 I 1710 C 0 s calJac3.chr3 188196027 1 - 190850796 a i calJac3.chr3 C 0 I 4 s canFam3.chr16 15690877 1 - 59632846 A i canFam3.chr16 C 0 C 0 e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132813279 618 + 135778131 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=254645.000000 s hg38.chr4_KI270785v1_alt 5381 99 + 119912 GTGAGAAGAGACTGAATTGTGCTTGAGAC-GGAAGCAAAACTTTGAAGCAGCAGCAAAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCATGAGTTCA s panTro4.chr4 190277894 99 + 193495092 GTGAGAAGAGACTGAATTGTGCTTGAGAC-GGAAGCAAAACTTTGAAGCAGCAGCAAAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCATGAGTTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243231 99 + 198332218 GTGAGAAGAGACTGAATTGTGCTTGAGAA-GGAAGCAAAAGTTTGAAACAGCAGCAAAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCATGAGTTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215621 98 + 115148730 gtgagaagagactgaattgtgcttgagaa-ggaagcaaaa-tttgaagcagtagcaaaggtttgatgg-aaaactaaagggagatatgattcacaagttca i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355747 99 + 189454096 gtgaaaagagactgaattgtgcttgagaa-ggaagcaaaagtttgaagcagcagcaaaggtttgacag-aaaactaaagggagagatgattcacgaggtca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175972841 98 + 178775436 GTGAGAAGAGGTTGAATCATGCTTGAGAA-GGAAACAAAAGTTTGAAACAGCAGC-AAGGTTTGACAG-AAAACTAAAGGGAGATATGATTCAGGAGGTCA i papAnu2.chr5 C 0 T 1759 s chlSab2.chr7 132813897 99 + 135778131 GTGAGAAGAGACTGAATTGTGCTTGAGAA-GGAAGCAAAAGTTTGAAGCAGCAGCAAAGGTTTGACAG-GAAACTAAAGGGAGAGATGATTCACGAGGTCA i chlSab2.chr7 I 618 C 0 s calJac3.chr3 188196032 97 - 190850796 aAGTGAAGAGACTGAATTGTGCTTGAGAA-GGAA-CAAGAGTTTGAAGCAGAAGT-AAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCATTAGGTCA i calJac3.chr3 I 4 C 0 s canFam3.chr16 15690878 100 - 59632846 GTGAGTCAAAACAGAATCGTGGCTGGGAAGGGAAGCAAAAGTTTGAAGCAGCACC-AAGGCTTGATGGAAAAACTAAAGAGAGATATGATTCACAAGGTCA i canFam3.chr16 C 0 T 1166 e mm10.chr8 84682794 2146 - 129401213 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=13406.000000 s hg38.chr4_KI270785v1_alt 5480 10 + 119912 TGAatattat s panTro4.chr4 190277993 8 + 193495092 TGAatatt-- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243330 10 + 198332218 TGAatattat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215719 10 + 115148730 tgaatattat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355846 10 + 189454096 ggaatattat i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132813996 10 + 135778131 GGAATATTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188196129 10 - 190850796 TGAATATTAT i calJac3.chr3 C 0 I 152 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e papAnu2.chr5 175972939 1759 + 178775436 T e rheMac3.chr5 181017997 1491 + 184069350 M a score=12.000000 s hg38.chr4_KI270785v1_alt 5490 4 + 119912 ata-----t s panTro4.chr4 190278001 1 + 193495092 --------t i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243340 4 + 198332218 ata-----t i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215729 4 + 115148730 gta-----t i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355856 9 + 189454096 atataattt i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132814006 9 + 135778131 ATATAATTT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e calJac3.chr3 188196139 152 - 190850796 I e papAnu2.chr5 175972939 1759 + 178775436 T e rheMac3.chr5 181017997 1491 + 184069350 M a score=40447.000000 s hg38.chr4_KI270785v1_alt 5494 29 + 119912 attatataaattttataatatataatatg s panTro4.chr4 190278002 29 + 193495092 attatataaattttataatacataatatg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243344 29 + 198332218 aatatataaattttataatatataatagg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215733 29 + 115148730 attatataaattttataatatataatatg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355865 29 + 189454096 attatataaattttataatatataatatg i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132814015 29 + 135778131 ATTATATAAATTTTATAATATATAATATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188196291 22 - 190850796 ataatataaattatatgaaata------- i calJac3.chr3 I 152 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e papAnu2.chr5 175972939 1759 + 178775436 T e rheMac3.chr5 181017997 1491 + 184069350 M a score=53619.000000 s hg38.chr4_KI270785v1_alt 5523 34 + 119912 tattataatagata----atatataacatattgtatt-a s panTro4.chr4 190278031 32 + 193495092 tattataatagata----atatataac--attgtatt-a i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243373 32 + 198332218 tattataatagata----gtatataac--attgtatt-a i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215762 34 + 115148730 tattataatcgata----atatataatatattgtatt-a i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186355894 33 + 189454096 tattataatagata----acatataatacattgtatt-- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175971180 33 + 178775436 tattataatagata----acatataatacattgtatt-- i papAnu2.chr5 T 1759 C 0 s chlSab2.chr7 132814044 34 + 135778131 TATTATAATAGATA----ACATATAATACATTGTATTA- i chlSab2.chr7 C 0 I 29 s calJac3.chr3 188196313 38 - 190850796 tattataatacatattctatgtattatatattgtatt-a i calJac3.chr3 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=30966.000000 s hg38.chr4_KI270785v1_alt 5557 41 + 119912 atatcatttatcaattatttttatattaatttttcattaat s panTro4.chr4 190278063 41 + 193495092 atatcatttatcaattatttttatattaatttttaattaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243405 34 + 198332218 a-------tatcaattatttttatattaatttttaattaat i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111215796 35 + 115148730 atatcaattctcaa------ttatattaatttttaattaat i nomLeu3.chr7b C 0 I 1 s macFas5.chr5 186355927 26 + 189454096 ---------atcta------ttatattaattttaaattaat i macFas5.chr5 C 0 I 4 s papAnu2.chr5 175971213 26 + 178775436 ---------atcta------ttatattaattttaaattaat i papAnu2.chr5 C 0 I 4 s calJac3.chr3 188196351 38 - 190850796 atatCAGCTATCAATTA---TTACATTAACTATTAATAATT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132814078 29 + 135778131 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=177737.000000 s hg38.chr4_KI270785v1_alt 5598 143 + 119912 atactatacaattatataaatatgtca----atatataatacatattaataaatatatgtatac---------------------acatatgtatataaaatacat-------------atataaattacatta-----atgtaattag-----tataaata-tatgttatattata-atgtatatata-------ttta s panTro4.chr4 190278104 152 + 193495092 atactataCAATtatataaatatgtca----atatataatacatattaataaatatatgtatac---------------------acatatgtatataaaatacatatata---at-aaatataAATTACATTA-----ATGTAATTAG-----tataaata-tatgttatattata-atgtatatatt-------ttat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243440 158 + 198332218 atactataCAATTATATAAATATTTCACtatgtatataatacatattaataaatatatgtatac---------------------acatatgtatataaaatacatatata---at-aaatataaattacatta-----atataattagt---atataaata-tatattatattata-atgtatatatt-------ttat i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111215832 165 + 115148730 atactatacaagtatataaatatggcaatatgtatataatacatattaataaatatatgtatac---------------------acatatgtatataaaatacatatata---ataaaatataaattacatta-----acataattagtgtaatataaatgttatattattttata-atgtatatatt-----tatatt i nomLeu3.chr7b I 1 C 0 s macFas5.chr5 186355957 125 + 189454096 atactatacaattatataaatatgtcaatatgtatataatacatattaataaataaat-----------------------------atatgtatataaaatacatatata---ataaactataaattacttta-----atataattag--------------tatattata-tata----------------------- i macFas5.chr5 I 4 C 0 s papAnu2.chr5 175971243 125 + 178775436 atactatacaattatataaatatgtcaatatgtatataatacatattaataaataaat-----------------------------atatgtatataaaatatatatata---ataaactataaattacttta-----ttataattag--------------tatattata-tata----------------------- i papAnu2.chr5 I 4 C 0 s chlSab2.chr7 132814107 133 + 135778131 ATACTATACAATTATATAAATATGTCAATATGTATATAATACATATT----AATAAAT-----------------------------ATATGTATATAAAATACATATATA---ATAAACTATAAATTACTTTA-----ATATAATTAG--------------TATATTATA-TATAGTTGTATATTTA----------- i chlSab2.chr7 I 29 I 24 s calJac3.chr3 188196389 192 - 190850796 ACACTATA-----atataaatatatcaatatgtgtatcatacatataaatatatatataaatatgatatgtatgatatatgataaatatatgcatatgatataaatatatgtatatgacatacatataaatttattaccatataattgt-ataatataaata-tatattataataca-atacatatattacatatattta i calJac3.chr3 C 0 I 24 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=2975.000000 s hg38.chr4_KI270785v1_alt 5741 39 + 119912 attatat-at----attat---attata---tatttatacttaaa--taaa---a s panTro4.chr4 190278256 45 + 193495092 attatataat----tatat---attata---tatttatacttaaaattatatgta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243598 47 + 198332218 attatataattataattat---agtata---tatttatgctaata--taaaatta i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111215997 46 + 115148730 atcatataat----tatatataattata---tatttatacttata--tgaaatta i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186356082 23 + 189454096 ----------------------gttata-------tata-ttgta--ttaaatta i macFas5.chr5 C 0 I 9 s papAnu2.chr5 175971368 27 + 178775436 ----------------------gttata---tatttata-ttgta--ttaaatta i papAnu2.chr5 C 0 I 5 s calJac3.chr3 188196605 41 - 190850796 ataatat-at----gttat---attaaacaatattaata-ttata--taaca--- i calJac3.chr3 I 24 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e chlSab2.chr7 132814240 24 + 135778131 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=347967.000000 s hg38.chr4_KI270785v1_alt 5780 258 + 119912 ttatatgtatta----tatta---tat-atttatattatgtttatgtatattatatacataatat--------------atacatacattttatatacataatacacac----atatataatatataatagcat----acacatacatatatgcaatatatgtaatatgtg--------------------------------------------tatgtatatataatatatacatacacatatattacatatatgtatttactatataatataaat-----atatatctttgtatatatgta--tatatattacatataagt--tatatatatat-TTTT s panTro4.chr4 190278301 303 + 193495092 ttatatgtatta----tatta---tat-atttatattatgtttatgtatattatatacataatat-----------ataatacatacattttatatacataatacacac------atataatatataatagcat----acacatacatatatgcaatatatgtaatatatatttatgtatatgtaatatatgtttatgtatatattatatatatttatgtatatataatatatacataaacatatattacatatatgtatttactatataatataaat-----atatatctttgtatatatgta--tatatattacatataagt--tatatatatat-TTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243645 263 + 198332218 taatatg---------tatta---tat-atttata-----tgtatgtatgttatatacataatat-----------atattaCATACATTTtatatacataatacacac----atatataatatataatagcat--acacacatacatatatgcaatatatgtaatgtata-------------------------------tattata------tacttatatataatatatacatacac----attacatatatgtatatactatataatataaatatataatatatatttgtatatatgtatgtatatatTACATTTAAGT--AATATATATAT-TTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111216043 273 + 115148730 taataagtattatatgtatta---tat--tatatattatatttatgtatgttatatacataatatata--------atattacatgcattttatatacataatacac--------atataatatataatagcatacacacatatacatatatgcaatatatataatgtata-------------------------------taatatatatt--tatgtatatataatatatacatacac--atattgcatatatgtatatactatataatataaat-----atata-----atatatgtgta--tatatattacatataagtaatatatatatat-atTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186356114 266 + 189454096 ttatatgtatta----tatta---gat----------atatttatgtatgttatatacataatatata--------atattacatacattttatattcataatacacac------atataatatataata----acacacatatacatatatgcaatatatgtaatgtata-------------------------------ttatatatttatttatgtatacattatatacacat------atattgcatagatgtatatactatataatacaaatatatagtatatatttgtatatatgta--tatatattacatataagt--aatatatatatTTTTT i macFas5.chr5 I 9 C 0 s papAnu2.chr5 175971400 256 + 178775436 ttatatgtatta----tatta---gat----------atatttatgtatgttatatacataatatata--------atattacatacattttatattcataatacacac--------ataatatataata----------atatacatatatgcaatatatgtaatgtata-------------------------------ttatatatttatttatgtatacattatatacac--------atattgcatagatgtatatactatataatacaaatatatagtatatatttgtatatatgta--tatatattacatataagt--aatatatatatttttt i papAnu2.chr5 I 5 C 0 s chlSab2.chr7 132814264 229 + 135778131 TTATATGTATTA----TATTA---GAT----------ATATTTATGTATGTTACATACATAATATATA--------ATATTACATACATTTTATATTCATAATACACAC----ATATATAATATATAACAACATACACACATATACATATATGCAATATATGTAATGTA-----------------------------------ATATAT--------------------------------------------ATGTATATACTATATAAGACAAATATATAGTATATATTTGTATATATGTA--TA-ATGTTACATATAAGT--AATATATATATATTTT i chlSab2.chr7 I 24 C 0 s calJac3.chr3 188196646 260 - 190850796 taatatatgtta----tattaatgtataatatgtattacatgtatttatattatatatatcatatgtatcttatatACGTTATATAC-TTTTTtatacataatacacacatacatatatagtatataatcatgt--acatatatacatatatgtaatatatgtaatctata-------------------------------taata--------tatgcatat-------------------atattacatatgtgtatatacaatat-ataca----------atatgtttttatgtatgta--tatatattacatataaat--tgtgtatatat-atT- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84682794 2146 - 129401213 I e rheMac3.chr5 181017997 1491 + 184069350 M a score=66888.000000 s hg38.chr4_KI270785v1_alt 6038 23 + 119912 TGAAAGGAAATACTATGTACTGT s panTro4.chr4 190278604 23 + 193495092 TGAAAGGAAATACTATGTACTGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243908 23 + 198332218 TGAAAGGAAATACTATGTACTGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111216316 23 + 115148730 TGAAAGGAAATACTATGTATTGT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186356380 23 + 189454096 TGAAAGGAAATACTATGTACTGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175971656 23 + 178775436 tgaaaggaaatacTATGTACTGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132814493 23 + 135778131 TGAAAGGAAATACTATGTACTGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188196906 16 - 190850796 -------AAATACTCTATACTGT i calJac3.chr3 C 0 C 0 s mm10.chr8 84684940 23 - 129401213 TGAAAGGAAATACTATGTACTGT i mm10.chr8 I 2146 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e rheMac3.chr5 181017997 1491 + 184069350 M a score=525402.000000 s hg38.chr4_KI270785v1_alt 6061 238 + 119912 AGAAGATGGAAttttttttt----tttgagatggagtctgtctctgttgcctaggctggagtgcaatgacgctatctcagctcactgcaacctccacctcctaggttcaagcgattttcctgtctcagcctcccaagtagctgggattac---aggcatccaccaccatgcccagataa-ttttttgtattttaagtagagatgaggtttcaccatgtttgccagactggtttcgaactcctgacc s panTro4.chr4 190278627 237 + 193495092 AGAAGGTGGAA-tttttttt----tttgagatggagtctgtctctgttgcctaggctggagtgcaatgacgctatctcagctcactgcaacctccacctcctaggttcaagggattttcctgtctcagcctcccaagtagctgggattac---aggcatccaccaccatgcccagataa-ttttttgtattttaagtagagatgaggtttcaccatgtttgccagactggtttcgaactcctgacc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195243931 236 + 198332218 AGAAGATGGAA--ttttttt----tttgagatggagtctgtctctgttgcctaggctggagtgcaatgacgctatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgtctcagcctcccaagtagctgggattac---aggcatccaccaccatgcccggataa-ttttttgtattttaagtagagatgaggtttcaacatgttggccagactggtttcgaactcctgacc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111216339 246 + 115148730 AGAAGATGGAAtttttttttttaatttgagatggagtctctctctgttgcccagactggagtgcaatgacactatctcagctcactgcaacctccacctcccaggttcaagcgattctcctgtctcagcctcccaagtagctgggattacataaggcatccaccaccatgcccagataatttttttgtattttaagtaaagatgaggtttcaccatgttgaccagactggtttcgaactcctgacc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186356403 239 + 189454096 AGAAGATGGAAtttttgttt---gtttgaggtggagtctctctgtgttgcccaggctggagtgcagtggcgctatctcagctcaccgggacctccacctcccaggttcaagcgattctcttgtctcagcctcccaagtagctgggattat---aggcatccaccaccatgcccagataa-ttttttgtattttaagtagagatgaggtttcaccatgttggccagaccggtttcgagctcctgact i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175971679 239 + 178775436 AGAAgatggaatttttgttt---gtttgaggtggagtctctctctgttgcccagactggagtgcagtggcgctatctcagctcaccgggacctccacctcccaggttcaagcgattctcttgtctcagcctcccaagtagctgggattat---aggcatccatcaccatgcccagataa-ttttttgtattttaagtagagatgaggtttcaccatgttggccagaccggtttcgagctcctgact i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132814516 239 + 135778131 AGAAGATGGAAtttttgttt---gttttagatggagtctctctctgttgcccaggccggagtgccgtggcgctatctcagctcaccgtgacctccacctcccaggttcaagcgattctcttgtctcagcctcccaagtagctgggattat---aggcatccaccaccatgcccagataa-ttttttgtagtttaagtagaggtgaggtttcaccatgttggccagactggtttcgagctcctgact i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188196922 237 - 190850796 AGAAGATAGAAttttttttt-----ttgaggtggagtcttcctctgttgctcaggctgaagtgcaatgacacgatcttggctcactgcaacctctgcctcctgggttcaagtgattcttctgtctcagcttcctaagtagctgggattac---agatgtccaccaccacattcagctaa-ttttttgaatttttactagagacgaggttttaccatgttggccaggctggtttcaaactcctgaca i calJac3.chr3 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84684963 0 - 129401213 C e rheMac3.chr5 181017997 1491 + 184069350 M a score=199492.000000 s hg38.chr4_KI270785v1_alt 6299 68 + 119912 tcaagtgatccgcctgcctcagcctcccaaagtgctgggattacaggcgtgaaccactgcacctggcc s panTro4.chr4 190278864 68 + 193495092 tcaagtgatccgcctgcctcagcctcccaaagtgctaggattacaggcgtgaaccaccgcacctggcc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195244167 68 + 198332218 tcaagtgatccgcctgccttagcctcccaaagtgctaggattacaggcgtgaaccaccgcccctggcc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111216585 68 + 115148730 tcaagtgatctgcctgcctcagcctcccaaagtgctaggattacaggcatgaaccaccgtgcctggcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181019494 68 + 184069350 tcaagtgatccacctgcctcagcatcccaaagtgctgggatcacaggcgtgagccaccgtgcctggcc i rheMac3.chr5 M 1491 C 0 s macFas5.chr5 186356642 68 + 189454096 tcaagtgatccgcctgcctcagcctcccaaagtgctgggatcacaggcgtgagccaccgtgcctggcc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175971918 68 + 178775436 tcaagtgatccacctgcctcagcctcccaaagtgctaggatcacaggcgtgagccaccgtgcctggcc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132814755 68 + 135778131 tcaagtgatccacctgccttagcctcccaaagtgctaggatcacaggcgtgagccactgtgcctggcc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188197159 68 - 190850796 tcaggtaatgcacctgctttggcttcccaaagtgccaggattacagccatgagccaccatgcccagcc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15690978 1166 - 59632846 T e mm10.chr8 84684963 0 - 129401213 C a score=2329756.000000 s hg38.chr4_KI270785v1_alt 6367 611 + 119912 AGAAGATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAATACAGCCAGCAGAATCCCATGCA-TTTTTTCAATAACAATGGATTTAACTG----TCTTCATTAGTCT----AAGTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAGAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCGCACTAAGGTTTTAATTTTGGGGGAAGATCACATGTGGCATCATAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCATATTAAGTAGTTGAACGAAGA-GTTTC-ATTTAATAGTATTTTAGTACCTTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCATGTTGA------ACTGCCCTTTCAATTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AAGTAGAGTTTAGAGAAGGGTATGAGAAATTAAGTAACATTAACAAAACAGAACA-----AG------------CCCCCAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATaaaataaaaattgaaaatgaacaataaaatctaaacacaatatgaaaaCTTCCCCCTTTATCATATATGTTAAT-AAAAGTATTGCAATTTT s panTro4.chr4 190278932 615 + 193495092 AGAAGATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAATACAGCCAGCAGAATCCCATGCA-TTTTTTCAATAACAATGGATTTAACTG----TCTTCATTAGTCTGTTAAAGTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCGCACTAAGGTTTTAATTTTGGGGGAAGATCACATGTGGCATCATAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCATATTAAGTAGTTGAACGAAGA-GTTTC-ATTTAATAGTATTTTAGTACCTTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCATGTTGA------ACTGCCCTTTCAGTTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AAGTAGAGTTTAGAGAAGGGTATGAGAAATTAAGTAACATTAACGAAACAGAACA-----AG------------CCCCCAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATAAAATAAAAATTGAAAATGAACAATAAAATCTAAACACAATATGAAAACTTCCCCCTTTATCATATATGTTAAT-AAAAGTATTGCAATTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195244235 616 + 198332218 AGAAGATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAATACAGCCAGCAGAATCCCATGCATTTTTTTCAATAACAACAGATTTAACTG----TTTTCATTAGTCTGTTAAAGTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTATCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTCATTTTAGGGGAAGATCATATGTGGCATCATAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTAAGTAGTTGAATGAAGA-GTTTC-ATTTAATAGTATTTTAGTACCTTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCATGTTGA------ACTGCCCTTTCAATTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AAGCAGAGTTTAGAGAAGGGTGTGAGAAATTAAGTAACATTAACAAAACAGAACA-----AG------------CCCCCAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATAAAATAAAAATGGAAAATGAACAATAAAATCTAAACACAATATGAAAACTTCCCCTTTTATCATATATGTTAAT-AAAAGTATTGCAATTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111216653 615 + 115148730 AGAAGATGGAAGTTTTA---GGTATAAATGAAATCCACTGCTCAAGACCCAAAAGGGAATACAGCCAGCAGAATCCCATGCA-TTTTTTCAGTAACAACAGATTTAACTG----TCTTCATTAGTCTGTTAAAGTACATACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTAATTTTAGGGGAAGATGGCATGTGGCATTGTAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTGAGTAGTTGAACGAAGA-GTTTC-ATTTAATAGTATTTTAGTACATTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCGTGTTGA------ACTGCCCTTTCAATTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AAGTAGAGTTTAGAGAAGGGTGTGAGAAATTAAGTAACATTAACAAAACAGAACA-----AG------------CCCCCAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATaaaataaaaattgaaaatgaacaataaaatctaaacacaatacgaaaaCTTCCCCTTTTATCATGTATGTTAAT-AGAAGTATTGCAATTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181019562 619 + 184069350 AGAAGATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAAGACAGCCAGCAGAATCCCATGCA-TTTTTTCAATAACAATGGATTTAACTGTTTGTCTTCATTAGTCTGTTAAATTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTAATTTTAGGGGAAGATCGCATGTGGCATCCTAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTAAGTAGTTGAACGAAGA-GTTTC-ATTTAAGAGTATTTTAGTACATTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCACGTTGA------ACTGCCCTTTCAATTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AGGTAGAGTTTAGAGAAGGTTATGAGAAATTAAGTAACATTAACAAAACAGTACA-----AG------------CCCCTAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATAAAATAAAAATTGAAAATGAACAATAAAATCTAAACACAATGAGAAAACATCCCCTTTTATCATGTATGTTAAT-AAAAGTATTGCAATTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186356710 619 + 189454096 AGAAGATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAAGACAGCCAGCAGAATCCCATGCA-TTTTTTCAATAACAATGGATTTAACTGTTTGTCTTCATTAGTCTGTTAAATTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTAATTTTAGGGGAAGATCGCATGTGGCATCCTAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTAAGTAGTTGAACGAAGA-GTTTC-ATTTAAGAGTATTTTAGTACATTAAAGTCAAGTGATTTCAGTCATTGAA-------------------CT--C---AGCACGTTGA------ACTGCCCTTTCAATTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AGGTAGAGTTTAGAGAAGGTTATGAGAAATTAAGTAACATTAACAAAACAGTACA-----AG------------CCCCTAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATaaaataaaaattgaaaatgaacaataaaatctaaacacaatgagaaaaCATCCCCTTTTATCATGTATGTTAAT-AAAAGTATTGCaatttt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175971986 619 + 178775436 agaagatGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAAGACAGCCAGCAGAATCCCATGCA-TTTTTTCAATAACAATGGATTTAACTGTTTGTCTTCATTAGTCTGTTAAATTACACACCCACTCATGCATTTGtgaattatgtttatttcaaaatgcaaaatagGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTAATTTTAGGGGAAGATCGCATGTGGCATCCTAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTAAGTAGTTGAATGAAGA-GTTTC-ATTTAAGAGTATTTTAGTACATTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCACGTTGA------ACTGCCCTTTCAATTCTCTACAGGAagttatttacctatttattgaATAAC----------AGGTAGAGTTTAGAGAAGGTTATGAGAAATTAAGTAACATTAACAAAACAGTACA-----AG------------CCCCTAAAATTCTTCt---gttaaaacattatt-atttagtg---ataaaataaaagttgaaaatgaacaataaaatctaaacacaatgagaaaacatCCCCTTTTATCATGTATGTTAAT-AAAAGtattgcaatttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132814823 608 + 135778131 AGAAAATGGAATTTTTA---GGTATAAATGAAATCCATTGCTCAAGACCCAAAAGGGAAGATAGCCAGCAGAATCCCATGCC-TTTTTTCAATAACAATGGATTTAACTGTTTATCTTCATTAGTCTGTTAAATTACACACCCACTCATGCATTTGTGAATTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAATGCTATGACAAGTCACCACACTAAGGTTTTAATTTTAGGGGAAGATCGCATGTGGCATCCTAAAGCCAGTTTTGAAGCTTAA-TTCTTTCCACATTAAGTAGTTGAACGAAGA-GTTTC-ATTTAAGAGTATTTTAGTACATTAAAGTCAAATGATTTCAGTCATTGAA-------------------CT--C---AGCACGTTGA------AC-----------TTCTCTACAGGAAGTTATTTACCTATTTATTGAATAAC----------AGGTAGAGTTTAGAGAAGGCTATGAGAAATTAAGTAACATTAACAAAACAGTACA-----AG------------CCCCTAAAATTCTTCT---GTTAAAACATTATT-ATTTAGTG---ATaaaataaaaattgaaaatgaacaataaaatctaaacacaatgagaaaaCATCCCCTTTTATCATGTATGTTAAT-AAAAGTATTGCaatttt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188197227 626 - 190850796 AGAAGATGGAATTTTTA---GGTATAAATCAAATCCAGTGCTCAAGACCCAAAAGGGAACGTAGCCAGCAGAATCCCATGTG--CTTTTCAATAACCATAGATTTAGCTGTTTGTTTTCATTAGTCTGTTAAAGAACACACCAACTCATGTATTTGTGACTTATATTTATTTCAAAATGCAAAATAGGTGTCTGTTCTTTCTCAGTGCTATGACAAGTCACCACACCAAGGTTTTCATCTTAGGAGAAGATCACATGTGGCATCATAAAGCCAGTTGTGAAGCTTAA-TTCTTTCCACATTGTGTAGTTGAACGAAGA-GTTTT-ATTTAACGGTGTTTTAGTACACTGAGGTCAAACGGTTTCAGCTG-TGAA-------------------CTGGG---AGCATGTTGA------ATTGCCCTTTTAATTCTCCAGAGAAAGTTCCTT-CCTAT---TTGAATAAAGAAATGTGCGAAGGTGAGTTTAGAGAAGGTTATGAGAAATTAAGTAAGTTTAACAAGACAGAACA-----AG------------CCCCCCAAATTCTTCT---GTTAAAACATTATT-ATTTAGTGGTAATAAAATAAAAATCAAAAATGAACAATAAAATCTAAACACAATATGAAAGCTTCCCC--TTATCAAGTATGTTAAT-AAGAATATTACAATTTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84684963 633 - 129401213 AGAAGCCTGAATTATTACTTGGCATCATTCAAATCCATTGTTCGAGACTGAGAAAGGAGTTCAGCTAGCAGAAAACCATACA-CTTTTGAGTTAAGAATGGAGTT--TTG----TCTTTGTTAGTCTGTTACAGTGTGCACCGACTCCTGTGTTTATGAAGTACATGCATTTGGAAGCACGGAGTAAGTTTCTGCTCTTTCTCAGTGCTTTGGAAAATCACCAAAGCAAGGTTTTAATGTTAAGGGAAGACCATATGTAGAATAATAAAACCAGTTCC--AGCTTACTTTCTTTCTATGTTATTTAATCAAATGAAGA-GATTCTATTTAATAGTATTTTAGTGCATTAAAGGCAAG----TTCAACCAATAAA-------------------CT--CCTAAGTCTGATGA------ATTTCCCTCTTAATTATGTACAATAAATTA-TTATCTCTTTATCGAATGCACACAGGATTGAAGTGAAATCTGGAGAAGGTTATGAGAAATTCAATATGATTAACAAAACAAAACA-----GAATTACCCCCCGCCCCGCCCAATTTTTCTGCAGTCTAAACATTATT-TAGTGGta---atataataaaaaaacaaaataaatgataatctttaaattcaatacataaatataataattGA------ATACTAAT-GAAAGCAGTGAAAACTT i mm10.chr8 C 0 C 0 s canFam3.chr16 15689812 662 - 59632846 AGAAGATGGAATTTTTG---GATATAACTCAAATCTGGTGTTCAGGGCTGAAAAGGAACTACAGCCAGCAGAATCCCATGTG-TTTTTTGAATAAGAATAGATTTAACTGTTTGTCTTCAGTAGTCTGTTAGAGTACACACCAACTCATGCACTTATGAATTATGTTTATTTCAAGGCGTAAAATTGGTCTCTGTTCTTTCTCAATGCTCTGAGGAGTTACCACACTAAGGTTTTAATTTTAGGGGAAAACCATGTCTGGCCTAATAAAACCAGTTTTGCAGCTTAA-TTCTTTCCACATTATGCAGCTCAAAGAAGAGGTTTT-AGTTAATAGTATTTTAGTTCATTAAAGGCAAGTGA-TTCAGTTCCTGAAGTCTGATGATGATTGGATTCT--C---AGTCTCTTGAGAATTGAATTCCCTCTCAGTTCTCTACAAAAAGAAATTCACCTGTTTATCGGATGAAGGAATGAGCAAAGTGGAGTTTAGAGAAAGTTACCAGAAATTAAGCGAGACTGACAAAATAGAACAGAAGGAG------------ACCAAAATATTCTTGA---GTTAAAACACTCTTAATTCAGTT-TCATAAAATAAAAATTGAAAAGTAGGAATAAAATCTGAAGACAGTAAGAAAACTT-ATCTTTTAGTATGCATTTTAATAAAAAGTATTGAGATTTT i canFam3.chr16 T 1166 I 130 a score=100390.000000 s hg38.chr4_KI270785v1_alt 6978 29 + 119912 AATTTTATTCCAAA-------TTTACTTTTCACGTT s panTro4.chr4 190279547 29 + 193495092 AATTTTATTCCAAA-------TTTACTTTTCACATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195244851 29 + 198332218 AATTTTATTCCAGA-------TTTACTTTTCACATT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217268 29 + 115148730 AATTTTATTCCAAA-------TTTACTTTTCACATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020181 36 + 184069350 AATTTTATTCCAAATTTTAACTTTACTTTTCACATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186357329 36 + 189454096 aattttattccaaattttaactttacttttCACATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175972605 36 + 178775436 aattttattccaaattttaactttacttttcacatt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132815431 36 + 135778131 aattttattccaaattttaactttacttttCACATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188197853 36 - 190850796 ACTTTTACTCCATATTTTAACTTTATATTTCGTATT i calJac3.chr3 C 0 C 0 s mm10.chr8 84685596 29 - 129401213 AACTTCACTGCAGT-------TTGGttttttatttt i mm10.chr8 C 0 I 240 s canFam3.chr16 15690604 36 - 59632846 AATCCTATTCCAAGATTTAAGTTTACTTTTTATATT i canFam3.chr16 I 130 C 0 a score=445450.000000 s hg38.chr4_KI270785v1_alt 7007 138 + 119912 CTTTTCTTTGCGGATA-ATCTTGAATGATTATTATTGCTG-----------------TTATTATTTTGGG---------GTGGGAATCAGGTTCTCTCTGGTGGGGCAGGAC--------------ATCACTTCCCTTTGATTCCACCTGGAGGGCATGCCATAGTCTGGGCCC-AGCTG s panTro4.chr4 190279576 138 + 193495092 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTATTGCTG-----------------TTATTATTTTGGG---------GTGGGAATCAGGTTCTCTCTGGTGGGGCAGGAC--------------ATCACTTCCCTTTGGTTCCACCTGGAGGGCATGCCATAGTCTGGGCCC-AGCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195244880 138 + 198332218 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTATTGCTG-----------------TTATTATTCTGGG---------GCAGGAATGAGTTTCTCTCTGGTGGGGCAGGAC--------------ATCCCTTCCCTTTGGTTCCACCTGGAGGGCGTGCCATAGTTTGGGCCC-AGCTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217297 138 + 115148730 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTATTGCTG-----------------TTATTATTTTGGG---------GCGGGAATCAGGTTCTATCTGGTGGGGCAGGAC--------------ATCACTTCCCTTTGGTTCCACCTGGAGGGCGTGCCATAGTCTGGGCCC-AGCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020217 138 + 184069350 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTACTGCTG-----------------TTATTATTTTGGG---------GCGGGAATCAGGTTCTCTCTGGTAGGGCAGGAC--------------ATCACTTGCCTTTGGTTCCACCTGGAGGGCGTGCCACAGTCTGGGCCC-AGATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186357365 138 + 189454096 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTACTGCTG-----------------TTATTATTTTGGG---------GCGGGAATCAGGTTCTCTCTGGTAGGGCAGGAC--------------ATCACTTGCCTTTGGTTCCACCTGGAGGGCGTGCCACAGTCTGGGCCC-AGATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175972641 138 + 178775436 cttttctttgCAGATA-ATCTTGAATGATTATtactgctg-----------------ttattattttggG---------GCGGGAATCAGGTTCTCTCTGGTAGGGCAGGAC--------------ATCACTTGCCTTTGGTTCCACCTGGAGGGCGTGCCACAGTCTGGGCCC-AGATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132815467 138 + 135778131 CTTTTCTTTGCAGATA-ATCTTGAATGATTATTACTGTTG-----------------TTATTATTTTGGG---------GCGGGAATCAGGTTCTCTCTGGTAGGGCAGGAC--------------ATCACTTGCCTTTGGTTCCACCTGGAGGGCGTGCCACAGTCTGGGCCC-AGGTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188197889 137 - 190850796 CTTTTCTTTGGAGATA-ATCTTGACTAATTATTATTGGTG-----------------TTATTATTTTGGG---------GCGGGAATCGGATTCTCTCCGGTAGGGCAGGAC--------------ATCAGTTGCCTTCGGCTCTGCCTGGAGGGCG-GCCTCAGTCTGGGCCC-CGCTG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15690640 178 - 59632846 CTTTTCTT--CAGATGTATCCTAAATTATTATGATTACTAAACTATTACTGTTCTTCTTATTATTTGTGGTCGTATTTTGCAGGAGTTACATTACACCTGGCAGGACAGGACATCTTCTAAGCAATATCATTTACTTGTGGCTCTCTCTGCAGGAATTGCCACAATCTGAGCCTGGGCTG i canFam3.chr16 C 0 C 0 e mm10.chr8 84685625 240 - 129401213 I a score=1336615.000000 s hg38.chr4_KI270785v1_alt 7145 387 + 119912 -AGGTATGGGCCCTGGGTGCTAATGTGGATAGATGATATCTATACTTAATTGTTTTATAGTCAGTGAGAAGAGGCTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAGCAGC-----AGCAAGATTTGATGG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGAGGAGGGTGATTTGAAA-AGGACTGA-AGGAAGAATAGAATCCATCA-AAGGGTGGTTCAGAACTCAAGCCAGGGAT-CTGTGGCAGGCCTCAGTGATGTGGAGGAGAGCCTGGGTGCTGTAAACAGAGGCTCGGGACTCAGCCACCTGCAGGTTTGAAGG--AGTTCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-AACTGCCCTAAAATGACAGAATGTAATAGCA s panTro4.chr4 190279714 387 + 193495092 -AGGTATGGGCCCTGGGTGCTAATGTGGATAGATGATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGCTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAGCAGC-----AGCAAGATTTGATGG-GAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGAGGAGGGTGATTTGAAA-AGGACTGA-AGGAAGAATAGAATCCGTCA-AAGGGTGGTTCAGAACTCAAGCCAGGGAT-CTGTGGCAGGCCTCAGTGATGTGGAGGAGAGCCTGGGTGCTGTAAACAGAGGCTCGGGACTCAGCCACCTGCAGGTTTGAAGG--AGTTCTGCCCCCAGATAGTTTCCTGCCGGG-----------GTGACC-AACTGCCCTAAAATGAGGGAATGTAATAGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195245018 386 + 198332218 -AGGTATGGGCCCTGGGTGCTGATGTGGATAGATGATATCTGTACTTAATTGTTTTACAATCAGTGAGAAGAGGCTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAGCAGC-----AGCAAGGTTTGATGG-AAAACTAAAGGGAGACATGATTCAGGAGGTCAGAGACGAGGGTGATTTGAAA-AGGACTGA-A-GAAGAATAGAATCCATCA-AAGGGTGGTTCAGAACTCAAGCCAGGGAT-CTGTGGCAGGCCTCAGTGATGTGGAGGAGAGCCTGGGTGATGTAAACAGAGGCTCAGGACTCAGCCACCTGCAGGTTTGAAGG--AGTTCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217435 387 + 115148730 -AGGTATGGGCCCTGGATGCTGATGTGGATAGATGATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGCTGAATCATGCCTGAGAAG-GAAACAAAAGTTTGAAGCAGC-----AGCAAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGAGGAGGGTGATTTGAAA-AGAACTGA-AGGAAGAATAGAATCCATCA-AAGGGTGGTTCAGAACTCAAGCCAGGGAT-CTGTGGCAGGCCTCAGTGATGTGGAGGAGAGCCTGGGTGATGTAAACAGAGGCTCAGGACTCAGCCACCTGCAAGTTTGAAGG--AGTTCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020355 387 + 184069350 -AGATGTGGGCCCTGGGTGCTGAAGTGGATAGATCATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGTTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAACAGC-----AGGAAGGTTTGACAG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGACGAGGGTGATTTGAAA-AGGACAGA-AGGAAGAATAGAATCCATCA-AAGGGTGGTTCAGAACTCAATGCAGGGAT-CTGTAGCAGGCCTCAGTGATGTGGAGGAGAGCCAGGGTGCCGTAAACAGAGGCTCAGGACTCAGCCACCTGCAGGTTTGAAGG--AGTCCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186357503 387 + 189454096 -AGGTGTGGGCCCTGGGTGCTGAAGTGGATAGATCATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGTTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAACAGC-----AGGAAGGTTTGACAG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGACGAGGGTGATTTGAAA-AGGACAGA-AGGAAGAATAGAATCCATCA-AAGGGTGGTTCAGAACTCAATGCAGGGAT-CTGTAGCAGGCCTCAGTGATGTGGAGGAGAGCCAGGGTGCCGTAAACAGAGGCTCAGGACTCAGCCACCTGCAGGTTTGAAGG--AGTCCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175972779 387 + 178775436 -AGGTGTGGGCCCTGGGTGCTGAAGTGGATAGATCATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGTTGAATCATGCTTGAGAAG-GAAACAAAAGTTTGAAACAGC-----AGCAAGGTTTGACAG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGACGAGGGTAATTTGaaa-aggacaga-aggaagaatAGAATCCATCA-AAGGATGGTTCAGAACTCAATGCAGGGAT-CTGTAGCAGGCCTCAGTGATGTGGAGGAGAGCCAGGGTGCCGTAAACAGAGGCTCAGGACTCAGCCACCTGCAGGTTTGAAGG--AGTCCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132815605 387 + 135778131 -AGGTGTGGGCCCTGGGTGCTGAAGTGGATAGATCATATCTGTACTTAATTGTTTTATAGTCAGTGAGAAGAGGTTGAATCATGCTTGAGAAG-GAAACAGAAGTTTGAAACAGC-----AGCAAGGTTTGATGG-AAAACTAAAGGGAGATATGATTCAGGAGGTCAGAGACGAGGGTGATTTGAAA-AGGACAGA-AGGAAGAATAGAATCCATCA-AACGGTGGTTCAGAACTCAATGCAGGGAT-CTGTAGCAGGCCTCAGTGATGTGGAGGAGAGCCAGGGTGCCGTAAACAGAGGCTCAGGACTCAGCCGCCTGCAGGTTTGAAGG--AGTCCTGCCCCCAGATAGTTTCCTGCCAGG-----------GTGACC-GACTGCCCTAAAATGAGAGAATGTAATAGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188198026 376 - 190850796 -AGATATGGGTCC-AGGTGCTGGTGTGG-TGGATGATATCTGTACTTAATTGTTTTACAGTCAGTGAGAAGAGGCTGAATCATGCTTGAGAAG-GAAACAAAAGTTTAAAGCAGC-----ACCAAGGTTTGATGG-AAAACTCAA-GGAGATACGATTCAGGAGGTCAGAAACCAGGGTGATTTGAAA-AGGACAGAGAGGAAGAACAGAATCCAGC--AAGGCTGGTTCAGAACTCACGCCAGGGAT-CTGCAGCAGGCCTCAGTGGCGTGGAGGAGAGCCTGGGTCCTGCAGGCAGAGGCTCAAGA--------CCTGCAGGTTTGAAGG--AGTCCTGCCCCCGGACGGTTTCCCGCCGGG-----------GTGACT-GGCCACCCTAAAATGAGAGAATGTAATAGCA i calJac3.chr3 C 0 C 0 s mm10.chr8 84685865 401 - 129401213 -AGGACTTTGTCCTGAGTAACGGTGTGGATAGATTAGATCTTTACTTAGTCACCATA-ACTGAACATCAAGAAACTGAATCCTGATGGAAGAGTGGAAGAAAGGTTTGAAACAGCTCCCAAGTTACGTCTGACCG-TTAAAGAAAGCTAGATCTGATTGACGAAGTCAGAAGCGAGGATCATCTGAAGCAGGCCAGAAAGGCAGAAGAAAACAAGGCA-GGAGGATGGCCAGAATGAAAGTTAAGAGTGCACCAACATGA--AAATGATACTCAAGAGAGCTTGATTTATTAGAGCAGAGGGTGGGGA---AGCTATCTACAGATCTGGAAT---GTCGTTCCCTATGTAACTCTCCTGACTGGAACTGTGCTGTGTAGTTGGACTACCCTGAAGTAAGAGAATGTATTTACA i mm10.chr8 I 240 I 53 s canFam3.chr16 15690818 350 - 59632846 GGGTAGAGGGTCCTGGGAGCTCGTATGGACAGATAATATTTTTACATAGTTG---TATAGTTAGTGAGTCAAAACAGAATCGTGGCTGGGAAGGGAAGCAAAAGTTTGAAGCAGC-----ACCAAGGCTTGATGGAAAAACTAAAGAGAGATATGATTCACAAGGTCAGAGGATAGGATGATTTGAAACAGGATAGAAAGGAAGAATAAAATGAGTCAGGAGGGTGGTTCTGAACTCAAGTCATGAAT-GTGTCAAAGGTCTAAATGTTGTAGA-------------------AACAGATGGACGAGACAAAGCCATCTGTGAGTGTGGAGGCTAATCTTGCCCCTAAATAGTTTCC----------------------CC-----GCCCTGAAGTGAGA--------TAGCC i canFam3.chr16 C 0 C 0 a score=249988.000000 s hg38.chr4_KI270785v1_alt 7532 74 + 119912 ATTTAAGATCCCATTGCACATCAAACACAGACCCCAGTTTATTAAAC-AAGGGAATGCAATTTAAATTTGTGAAG- s panTro4.chr4 190280101 74 + 193495092 ATTTAACATCCCATTGCACATCAAACACAGACCCCAGTTTATTAAAC-AAGGGAATGCAATTTAAATTTGTGAAG- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195245404 74 + 198332218 ATTTGACATCCCATTGTACATCAAACACAGACCCCAGTTTATTAAAC-AAGGGAATGCAATTTAAATTTGTGAAG- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217822 74 + 115148730 ATTTGACATCCCATTGCACATCAAACACAGACCCCAGTTTGTTAAAC-AAGGGAATGCAATTTAAATTTGTGAAG- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020742 74 + 184069350 ATTTGACATCCCATTGCATTTCAAACACAGACCCCAGTTTATTAAAC-AAGGGAATGGAATTTAAATTTGTGAAG- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186357890 74 + 189454096 ATTTGACATCCCATTGCATTTCAAACGCAGACCCCAGTTTATTAAAC-AAGGGAATGGAATTTAAATTTGTGAAG- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973166 74 + 178775436 ATTTGACATCCCATTGCATTTTGAACACAGACCCCAGTTTATTAAAC-AAGGGAATGGAATTTAAATTTGTGAAG- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132815992 74 + 135778131 ATTTGACATCCCATTGCATATCAAACACACACCCCAGTTTATTAAAC-AAGGGAATGGAATTTAAATTTGTGAAG- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188198402 74 - 190850796 GTTTGACATCCCATTGCACTTCAAACACAGACCCCAGTTTATTAAAC-AAGGCAATGGAATTTAAATTCGCAAAG- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15691168 76 - 59632846 GTGTGGGATCCCATTTCACATCAAACATGGTCCCCACTTTCTTAAATAAAGGGAATGAAATTTAAATTTGTCCCAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84686266 53 - 129401213 I a score=264105.000000 s hg38.chr4_KI270785v1_alt 7606 77 + 119912 ACCAGTC----ATATTATTATTCCCGTTTTTCAGAGTTAATTATAAT-TGTGCCATTATTATTAGTGTGattaatataaata s panTro4.chr4 190280175 77 + 193495092 ACCAGTC----ATATTATTATTCTCATTTTTCAGAGTTAATTATAAT-TGTGCCATTATTATTAGTGTGattaatataaata i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195245478 77 + 198332218 ACCAGTC----ATATTATTATTCCCATTTTTCAGAGTTAATTATAAT-TGTGCCATTATTATTAGTGTGattaatataaata i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217896 75 + 115148730 ACCAGTC----ATATTATTATTCTCATTTTTC--AGTTAATTATAAT-TGCGCCATTATTATTAATGTGattaatataaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020816 74 + 184069350 ACCACTC-------TTATTATTCCCATTTTTCAGAGTTAATTATAAT-TGCGCCATTATTATTAGTGTGATTAATACAAATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186357964 74 + 189454096 ACCACTC-------TTATTATTCCCATTTTTCAGAGTTAATTATAAT-TGCGCCATTATTATTAGTGTGATTAATACAAATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973240 74 + 178775436 ACCActc-------ttattattcccatttttcagagtTAATTATAAT-TGCGCCATTATTATTAGTGtgattaatacaaata i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816066 74 + 135778131 ACCACTC-------TTATTATTCCCATTTTTCAGAGTTAATTATAAT-TGCACCATTATTATTAGTGTGATTAATACAAATA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188198476 81 - 190850796 ACCAGTCAGTCATATTATTATTCCCATTTTTCAGAGTTAATTATAAT-TGTGCTATCATTATTAGTGTGATTAACATACATA i calJac3.chr3 C 0 C 0 s mm10.chr8 84686319 60 - 129401213 ACTAGTT----ATGTTCTTACTCTTACTTGATA---TTACTTATAATATGTACCACCATTGT---------------GAATA i mm10.chr8 I 53 C 0 s canFam3.chr16 15691244 78 - 59632846 ACCACTT----ATATTCTTATTCTCATTTTTCAAGGTTAATTATAATCTGTGCTATTATTATTACCGTGGTTAATATAAATA i canFam3.chr16 C 0 C 0 a score=262431.000000 s hg38.chr4_KI270785v1_alt 7683 110 + 119912 aaaataacattttaaataaacacaataac-atataaatatataccaaatgtaaatataatatTTTTTTTCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC s panTro4.chr4 190280252 108 + 193495092 aaaataacattttaaataaacacaataac-atataaatatataccaaatgtaaatataata--ttttttCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195245555 108 + 198332218 aaaataacattttaaatCAACACAATAAC-ATAT--ATATATACCAAATGTAAATATAATAATTTTTTTCCTTCCAGTTACAGTATGTTAAATAAATATTCTAAGAGTAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111217971 110 + 115148730 aaaataacattttaaataaacacaataac-atataaatatatgtcaaatctaaatataaTAATTTTTTTCCTTCTAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181020890 110 + 184069350 AAAATAACACTTTAAATAAACACAATAAC-TTATAAATATATGCCAATTGTCAATATAATAATGTTTTCCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358038 110 + 189454096 CAAATAACACTTTAAATAAACACAATAAC-TTATAAATATATGCCAGTTGTCAATATAATAATGTTTTCCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973314 110 + 178775436 aaaataacactttaaataaacacaataac-ttataaatatatgccaattgtcaatataataatGTTTTCCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGagtaac i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816140 101 + 135778131 AAAATAACACTTTAAATAAACACAATAAC-------ATATATGCCAATTGTCAAT---ATAATGTTTTCCCTTCCAGTTACAGTATGTTAAATAAATATCCTAAGAGTAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188198557 94 - 190850796 AAAATAACATTTTAAATCAACACAGTAACAATATAAATGTATGCCAAAAGTAAATATAATAATGT----------------AGTATGTTAAA-AAATATCATAGGAATAAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84686379 64 - 129401213 AATACAGTATTTTCTAC-AGCATTAGTAT-GTATGGATGTa------------------------------------------tatgt---acaaacacacacagacacac i mm10.chr8 C 0 C 0 e canFam3.chr16 15691322 0 - 59632846 C a score=1490155.000000 s hg38.chr4_KI270785v1_alt 7793 465 + 119912 AAAAACATTTTCTGGGCACTACCATG-ATGGGATACATGGGGTGCGCAGTATTGAT---GTTGGGTAGAAAGCTTGGAATTTCCTTCTGCAACAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGAAAA----------A-------------------------------ATAA-AGCATAAGAGGGAAGGCCTAGAACATT-CTAGCTAGG-----AATA-ACTGAGTGAAGGGTTGGAGGTAGGAGCATACTCTTACAAGTCTCTACTCCAAGggaggaagaggaggacg-----aggaaggaCTAACCAGCAAGGATGC--CTGGTTTGGTTGACTCCCATCCAGCTTCTCAACTGCAGTCACTTAGTGTCTCCTCACCCGGACCTCGGATGTTTAGCCCAACCCAG--GTCCTGGCACTGTTCTAGTTTCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATCGGTTGTGAGCCTGCTTTACTGATGGCTCCAATATTAAATA-TTTCTTACTC s panTro4.chr4 190280360 462 + 193495092 AAAAACATTTTCTGGGCACTACCATG-ATGGGTTACATGGGGTGCGCAGTATTGAT---GTTGGGTAGAAAGCTTGGAATTTCCTTCTGCAACAAATGGAAGTGGCTTTGAGCCTTTCAAACAGAGTGAA--------------------------------------------AA-AGCATAAGAGGGAAGGCCTAGAACATT-CTAGCTAGG-----AATA-ACTGAGTGAAGGGTTGGAGGTAGGAGCATACTCTTACAAGTCTCTACTCCAAGGGAGGAAGAGGAGGAGG-----AGGAAGGACTAACCAGCAAGGATGC--CTGGTTGGTTTGACTCCCATCCAGCTTCTCAACTGCAGTCACTTAGTGTCTCCTCACCCGGACCTCGGATGTTTAGCCCAACCCAG--GTCCTGGCACTGTTCTAATTTCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTGCTTTCCTGATGGCTCCAATATTGAATA-TTTCTTACTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195245663 467 + 198332218 AAAAACATTTGCTGAGCACTACCGTG-ATGGGATACATGGGGTGCGGAGTATTGAT---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAACAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTCAA--------AAA-------------------------------ATAA-AGCATAAGAGGGAAGGCCTAGAACATT-CTAGCCAGG-----AATA-ACTGAGTGAAGGGTTGGAGGTAGGAGCATACTCTTAGAAGTCTCTACTCCAAGGGAGGAAGAGGAGGAGG-----AGGAAGGACTAACCAGCAAGGATGC--CTGGTTTGTTTGACTCCCATCCAACTTCTCAACTGCAGTCACTTAGTGTCTCCTCACCCGGACCTCGGATGTTTAGCCAAACCCAG--GTCCTGGCACTGTTCTAGTTTCCAGAATTCAGGGAGTTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTGCTTTACTGATGGCTCCAATATTAAATA-TTTCTTACTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111218081 467 + 115148730 AAAAACATTTTCTGTGCACTACCATG-ATGGGTTACACGGGGTGTGGAGTATTGAT---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAACAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTAAA--------AAA-------------------------------ATAA-AGCATAAGAGGGAAGGCCTAGAACATT-CTAGCCAGG-----AATA-ACTGAGTGAAGGGTTGGAGGTAGGAGAATACTCTTAGAAGTTTCTACTCCAAGggaggaagaggaggagg-----aggaaggaCCAACCAGCAAGTTTGC--CTGGTTTGTTTGACTCCCATGCAACTTCTCAACTGCAGTCACTTAGTGTCTCCTCACCCGGACCTCAGATGTTTAGCCCAACCCAG--GTCCTGGCACTGTTCTAGTTTCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAAATGGTTGTGAGCCTGCTTTACTGATGGCTCCAATATTAAGTA-TTTCTTACTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021000 461 + 184069350 -AAAACATTTTCTGAGCACTACCATG-ATGGGCTACATGGGGTGTAGAGTATTGAC---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAGCAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTAAA--------AAA-------------------------------GTAA-AGCATAAGAGGGAAGGCCTAGAACATT-GTAGCCGGG-----AAAA-ACTGAGTGAAGGGTTGGCAGTAGGAGCATACTCTTAGAGGTCTCCACTCCAAGGGAGGAAGAGGAGGAGG--AGAAGGAAGGACT--------AGGATGC--CTAGTTTGTTTGACTCCCATCCAACTCCTCAACTGCAGTAACTTAGTGTCTCCTCACCTGGACTTGGGATGTTTAGCCTAATCCAG--GTACGGGCACTGTTCTAGCTCCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTACTTTCCTGATAGCTCCAATATTAAATA-TTTCTTACTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358148 461 + 189454096 -AAAACATTTTCTGAGCACTACCATG-ATGGGCTACATGGGGTGTAGAGTATTGAC---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAGCAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTAAA--------AAA-------------------------------GTAA-AGCATAAGAGGGAAGGCCTAGAACATT-GTAGCCGGG-----AAAA-ACTGAGTGAAGGGTTGGCAGTAGGAGCATACTCTTAGAGGTCTCCACTCCAAGggaggaagaggaggagg--agaaggaaggact--------aggaTGC--CTAGTTTGTTTGACTCCCATCCAACTCCTCAACTGCAGTAACTTAGTGTCTCCTCACCTGGACTTGGGATGTTTAGCCTAATCCAG--GTACGGGCACTGTTCTAGCTCCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTACTTTCCTGATAGCTCCAATATTAAATA-TTTCTTACTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973424 462 + 178775436 aaaaacattttctgagcACTACCATG-ATGGGCTACATGGGGTGTAGAGTATTGAC---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAGCAAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTAAA--------AAA-------------------------------GTAA-AGCATAAGAGGGAAGGCCTAGAACATT-GTAGCCGGG-----AAAA-ACTGAGTGAAGGGTTGGCAGTAGGAGCATACTCTTAGAGGTCTCCACTccaagggaggaagaggaggagg--agaaggaaggact--------aggaTGC--CTAGTTTGTTTGACTCCCATCCAACTCCTCAACTGCAGTAACTTAGTGTCTCCTCACCTGGACTTGGGATGTTTAGCCTAATCCAG--GTACGGGCACTGTTCTAGCTCCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTACTTTCCTGATAGCtccaatattaaata-tttcttactc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816241 460 + 135778131 AAAGGCATTTTCTGAGCACTACCATG-ATGGGCTACGTGGGGTGCAGAGTATTGAC---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAGCGAATGGAAGTGGCTTTGAGCCTTTCAAATAGAGTAAA--------AAA-------------------------------GTAA-AGCATAAGAGGGAAGGCCTAGAACATT-GTAGCCGGG-----AAAA-ACCGAGTGAAGGGTTGGCAGTAGGAGCATACTCTTAGAGGTCTCCACTCCAAGTgaggaagaggaggagg--agaaggaaggact--------aggaTGC--CTAGTTTGTTTGACTCCCATCCAACTCCTCAACTGCAGTGACTTAGTGTCTCCTCACCTGGACTTGGGATGTTTAGCCT--TCCAG--GTACTGGCACTGTTCTAGCTCCCAGAATTCAGGGAATTT-ATTAGCATTTGACCAAAATAAATTGGTTGTGAGCCTACTTTCCTGATGGCTCCAATATTAAATA-TTTCTTACTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188198651 438 - 190850796 AAAAAC-CTTTCTGAGCACTACCATG-ATGGGATACATGGGGTGCAGAGTATTAAT---GTTGGGTAGAAAGCTTGGAATTTCTTTCTGCAACAAATAGAAGTGGCTTTGAGCCTTTCAAATAGAGCAAAAAAAAAAAAAA-------------------------------GTAA-TGCATTAGAGGGAAGGCCTAGAACATT-CTAACCAGG-----AAAA-ACTGAGTGAAGGGTTAGAGGTAGGAGCATCCTCTTAGAAGTCTCTACTCCAAGGGAGGAAGAGGAGGAGG-----AGGAAGGGCTAACTGGCAAGGATGC--CTGGTTCATTTGACTCTCATCCAG-------------------------CTCCTCACTGGGACCTGGGCGGTGTAGCCCAATCCAG--GTCATGGCACTATTCTAGTTCCCAGAATTCAGGGTATTT-ATTGGCATTTGACCAAAATAAACTGGGTGCGAGCCT------------GCGCCGATACTACATATTTTCTTACTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84686443 486 - 129401213 acacacat-------acacatatata-------catgtGGGGTCCAGAATATTAAC---ATGGGTTAAAGGATACAGAGTTACCTTCTACAACG-GTGGAAGTGGCTTTAGGCCTTTGAAATGAGGTGAT--------TTATTGTTAGTTTTGTTGTACTGTTGTTTGACTTGTGA-TGCATCAGATAGGAGAAATAGCATGTTACCATCCAGGCCCCTGGGA-AGTGAGTGGACAGCTGGATGAGGAAG---ATGAGGAGAAGCAAACATCACAGGCAATGAGGAGGAGGTGAAAAAAAGGAAGATGTGAACGGG-AGGAGGCTTTTTGCTTCTTTGACCCACACTCAGCTTAGCAGCTACACTGATTTCGTGTCTCCTTTGATGGAGCTGGAAGTCTTAGCCCACGTAAGCTTTCCTGGCAATG---TATTCCCCAGGATTGAAGTAATCCAATTAGCATTTGCCAAAAATATATTAGTTGCAAACCA--CTTACTGCTAGTTCCAATAAT------TTTTTTCCTC i mm10.chr8 C 0 I 34 s canFam3.chr16 15691322 465 - 59632846 AGCAATATTTTCTGAGCACCGCTGTGAATGGAATATGTGGGGTGGGGAGAGTTGACATGGTTGGAAAGAAGGCTTTTAATTGCTTTGTGCAACATATGGAAGTAGCTTTGGGATTTTCAAGGAGAGTAAA--------TAA-------------------------------ATAAGAGCATTGGAAGAGAGGGATAGAGTATT-TTACTGAGA-----GGGACACTGAGCAAAGGGCCAGAGGAGGGAACATACTCTTAGGAGTCT--ACCCTAAGGGTAGAGGAGGAGGTAG-------GATTAACTAGTGCATAAGCCTGG--CTTATCCATCTGACTCCTTTCCAGCTCCCAGGCTGGAGTGATTTAGTGTCTCCCCAGCTCGACCT-GGAGGTTTCATTCAAGACAG--GTTCTACCATCACTCTGGTTCCCAGAATTGAGGACATTTAATTAGAATTTGACCACCGTAAATCAG-TGCAAGGCTGTTGTGCTGCTGGTTCCAGGACC---TC-CTTACCACTC i canFam3.chr16 C 0 C 0 a score=138870.000000 s hg38.chr4_KI270785v1_alt 8258 50 + 119912 TGTGTCAGGGAGTTTCTGTCTTGTGACTACTATGGTGACTGGGTCTGTGT s panTro4.chr4 190280822 50 + 193495092 TGTGTCAGGGAGTTTCTGTCTTGTGACTACTATGGTGACTGGGTCTGTGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246130 50 + 198332218 TATGTCAGGGAGTTTCTGTCTTGTAACTTCTATGGTGACTGGGTCTGTGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111218548 50 + 115148730 TGTGTCAGGGAGTTTCTGTCTTGTGACTTCTATGGTGACTGGGTCTGTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021461 50 + 184069350 TGTGTCAGGGAGTTTCTGTCTTGTGACTTCTATGGTGTCTGGGTCTATGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358609 50 + 189454096 TGTGTCAGGGAGTTTCTGTCTTGTGACTTCTATGGTGTCTGGGTCTATGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973886 50 + 178775436 TGTGTCAGGGAGTTTCTGTCTTGTGACTTCTATGGTGTCTGGGTCTATGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816701 48 + 135778131 TGTGTCAGGGCGTTTCTGTCTTGTGACTTCTACGGTGACTGGGTC--TGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199089 46 - 190850796 TGTG-CAGGCAGTTTCCATCCTGTGACTC---TGGTAACTGGGGGTGTGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15691787 45 - 59632846 --TG-CAGAGAG--TCCAGCTTGTGGCTTCCACAGGGTAACCGTCTATGT i canFam3.chr16 C 0 C 0 e mm10.chr8 84686929 34 - 129401213 I a score=294865.000000 s hg38.chr4_KI270785v1_alt 8308 86 + 119912 TTTT-CCAGGTCTCTGGCCCATTGCTCCCTGTCTGA----CTGAGCCCTCCTATGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT s panTro4.chr4 190280872 90 + 193495092 TTTT-CCAGGTCTCTGGCCCATTGCTCCCTGTCTGACTGTCTGAGCCCTCCTATGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246180 91 + 198332218 TTTTCCCAGGTCTCTGGCCCATTGCTCCTTGTCTGACTATCTGAGCCCTCCTATGCTTTCTGGGCATTTGGACTGAGCCTCAGTTTCTCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111218598 87 + 115148730 TTTTTCCAGGTCTCTGGCCCATTGCTCCCTGTCTAT----CTGAGCCCTCCTGTGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021511 91 + 184069350 TTTTCCCAGGTCTCTGGCCCATTGTTCCCTGTCTGACTATCTGAGCCCTCCTGTGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358659 91 + 189454096 TTTTCCCAGGTCTCTGGCCCATTGTTCCCTGTCTGACTATCTGAGCCCTCCTGTGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175973936 91 + 178775436 TTTTCCCAGGTCTCTGGCCCATTGCTCCCTATCTGACTATCTGAGCCCTCCTGTGCTTTCTGGGGATTTgggctaagcctcagtttctctt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816749 84 + 135778131 TTTTCCCA-------GGCCCATTGCTCCCTGTTTGACTATCTGAGCCCTCCTGTGCTTTCTGGGGATTTGGGCTGAGCCTCAGTTTCTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199135 83 - 190850796 TTTTCCCAGGTCTCTGGCCCACTGCTCCCTAT--------CTGAGCCCTCCTGTCCTCTCTGGGGAGTTGAGCTGAGCCTCAGTTTCTCTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84686963 73 - 129401213 -TTATCAAGGT-----GCCTCTCGCTCCCTAC--------TTAAGCCTTA----GGTTGCTGAGGTTATGGGCTGAGCCTCTATCTCTTTT i mm10.chr8 I 34 I 35 s canFam3.chr16 15691832 80 - 59632846 TGTTTCCGGGTCTGTGACCTATTGCTCCCTG---------GGAAGCCCTACCTTACTTTCTGCAGCTGTGGGCTGAGCCTCAGTATCTC-- i canFam3.chr16 C 0 C 0 a score=44694.000000 s hg38.chr4_KI270785v1_alt 8394 12 + 119912 CTGCATGGGTGT s panTro4.chr4 190280962 12 + 193495092 CTGCATGGGTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246271 12 + 198332218 CTGCATGGGTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111218685 12 + 115148730 CTGCATGGGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021602 12 + 184069350 CTGCATGGGTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358750 12 + 189454096 CTGCATGGGTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974027 12 + 178775436 ctgcATGGGTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816833 12 + 135778131 CTGCATGGGTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199218 12 - 190850796 CTGCATGGGTTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15691912 12 - 59632846 CAGTTTGGGTTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84687036 35 - 129401213 I a score=296234.000000 s hg38.chr4_KI270785v1_alt 8406 168 + 119912 TAGATGATTTTtt--ttttgtttttc----ttttt---------tcttttttttttgagacagagtctctccctgtcacccaggctggagtgcagtggcgtgatctcggctcacggcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcccgagtagctgggactacaggc s panTro4.chr4 190280974 174 + 193495092 TAGATGAtttttttgttttgtttttcttttttttt---------ttttttttttttgagacagagtctctccctgtcacccaggctggagtgcagtggcgtgatctcggctcacggcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246283 183 + 198332218 TAGATGATTTTTTGTTGTTGTTTTTCTGGttttttgtttgtttgtttgttttttttgagacatagtctctctctgtcacccaggctggagtgcaatggcatgatctcggctcactgcaacctccacctcccgggttcaagcaattctgctgcctcagcctcccaattagctgggactacatgt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111218697 152 + 115148730 GAGA-----tttt-----------------ttttt---------ttttttttttttgagacagagtctcactctgttacccaggctggagtgcagtggcgctatctcggctcactgcaagctccgcctcccgggttcaagcaattctcctgtctcagcctcctgagtagctgggactacaggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021614 155 + 184069350 TAGATGACtt-------------------tttttt---------ttttttttttttgagatggagtctctctctgtcacacaggctggagtgcagtggcatgatctcagatcactgcaacctctgcctccagggttcaagcgattttcctgtctcagcctcccaagtagctgggactataggc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358762 155 + 189454096 TAGATGACtt-------------------tttttt---------ttttttttttttgagacagagtctctctctgtcacacaggctggagtgcagtggcatgatctcagatcactgcaacctctgcctccagggttcaagcgattttcctgtctcagcctcccaagtagctgggactataggc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974039 161 + 178775436 Tagataacttttt-------------ttattttta---------tttttattttttgagacggagtctctctctgtcacacaggctggagtgcagtggcatgatctcggatcactgcaacctctgcctccagggttcaagcgattttcctgtctcagcctcccaagtagctgggactataggc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132816845 156 + 135778131 TAGATGACttt------------------tttttt---------ttttttttttttgagacggagtctctctctgtcacacaggctggagtgcagtggcatgatctcagatcactgcaacctccgcctcccgggttcaagcaattctcctgtctcagcctcccaagtagctgggactataggc i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15691924 39 - 59632846 ------------------------------TAGAT---------GCTCGTTTTATAGAGACAGA------------------------------------TGA---------------------------------------------------------------------GAACCACAGGC i canFam3.chr16 C 0 C 0 e mm10.chr8 84687036 35 - 129401213 I e calJac3.chr3 188199230 0 - 190850796 C a score=27000.000000 s hg38.chr4_KI270785v1_alt 8574 23 + 119912 gcctgccaccacgcctggctaac- s panTro4.chr4 190281148 23 + 193495092 gcccgccaccacgcctggctaac- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246466 23 + 198332218 gcctgccaccacgcctggctcac- i ponAbe2.chr4 C 0 I 310 s nomLeu3.chr7b 111218849 23 + 115148730 gcccgccaccacgcccggctaac- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021769 24 + 184069350 atccaccaccatgcccagataatt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358917 24 + 189454096 atccaccaccatgcccagataatt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974200 24 + 178775436 atccaccaccatgcccagataatt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817001 23 + 135778131 acatggcagcacacccagctaa-t i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15691963 0 - 59632846 C e mm10.chr8 84687036 35 - 129401213 I e calJac3.chr3 188199230 0 - 190850796 C a score=300473.000000 s hg38.chr4_KI270785v1_alt 8597 130 + 119912 ttttgtatttttagtagagacggggtttcaccatattggtcaggctgatctcgaactcctgaccttgtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgtgcctggcc s panTro4.chr4 190281171 130 + 193495092 ttttgtatttttagtagagacggggtttcaccatattggtcaggctgatctcgaactcctgaccttgtgatccgcccaccttggcctcccaaagtgctgggattacaggtgtgagccactgcacccggcc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246799 130 + 198332218 ttttgtatttttagtagagacggggtttcaccatattggtcaggctggtctcgaactcctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcc i ponAbe2.chr4 I 310 C 0 s nomLeu3.chr7b 111218872 130 + 115148730 ttttgtatttttagtagaaacggggtttcaccatattgatcaggctggtcttgaactcctgaccttgtgatctgcccaccttggcctttcaaagtgctgggattacaggtgtcagtcactgcgcccagcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021793 130 + 184069350 ttttgtattttaacccgagttgaggtttcaccatattggccaggctggtcttgaactcctgaccttgtgatcctcccaccttggcctcccaaagtgctcggattacaggtgtgagccaccacacccggcc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186358941 130 + 189454096 ttttgtattttaagcagagttgaggtttcaccatattggccaggctggtcttgaactcctgaccttgtgatcctcccaccttggcctcccaaagtgctcggattacaggtgtgagccaccacacccggcc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974224 130 + 178775436 ttttgtattttaagtagagttgaggtttcaccatattggccaggctggtcttgaactcctgaccttgtgatcttcccaccttggcctcccaaagtgctgggattacaggtgttagccaccacacccggcc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817024 130 + 135778131 ttttgtatttttagtacagatggggtttcaccatgttggccaggctggtcttgaactcctgaccttgtgatcctcccaccttggcctcccaaagtgctgggattacaggtgttagccaccacacctggcc i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15691963 0 - 59632846 C e mm10.chr8 84687036 35 - 129401213 I e calJac3.chr3 188199230 0 - 190850796 C a score=123474.000000 s hg38.chr4_KI270785v1_alt 8727 39 + 119912 TAGATGACTATTTTATAGGCGGAGATGATAACCACAGAA s panTro4.chr4 190281301 39 + 193495092 TAGATGACTATTTTATAGGCGGAGATGATAACCACAGAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246929 39 + 198332218 TAGATGACTATTTTATAGGCGGAGATGATAACCACAGAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219002 39 + 115148730 TAGATGACTATTTTATAGGCGGAGATGATAAGCACAGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021923 39 + 184069350 TAGATGACTATTTTATAGGCGGAGATGATAGCCACAGAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186359071 39 + 189454096 TAGATGACTATTTTATAGGCGGAGATGATAGCCACAGAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974354 39 + 178775436 tagatGACTATTTTATAGGCGGAGATGATAGCCACAGAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817154 39 + 135778131 TAGATGACTATTTTATAGGCGGAGATAATAGCCACAGAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199230 39 - 190850796 TAGATGACTATTTTATAGGCGGAGGTGAGAACCACAGAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15691963 0 - 59632846 C e mm10.chr8 84687036 35 - 129401213 I a score=95796.000000 s hg38.chr4_KI270785v1_alt 8766 25 + 119912 TGTTGGCTGAATATTGAGGGCACTT s panTro4.chr4 190281340 25 + 193495092 TGTTGGCTGAATATTGAGGGCACTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195246968 25 + 198332218 TGTTGGCTGAATATTGAGGGCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219041 25 + 115148730 TGTTGGCTGAATATTGAGGGCACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021962 25 + 184069350 TGTTGGCTGAATATTGAGGGCACTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186359110 25 + 189454096 TGTTGGCTGAATATTGAGGGCACTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974393 25 + 178775436 TGTTGGCTGAATATTGAGGGCACTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817193 25 + 135778131 TGTTGGTTGAATATTGAGGGCACTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199269 25 - 190850796 TGTCGGCTGAATATTGTGGACACTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15691963 25 - 59632846 TGTTGGCTGAGCATCGAGGGTACTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84687036 35 - 129401213 I a score=559368.000000 s hg38.chr4_KI270785v1_alt 8791 164 + 119912 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTAGAATAGTTCAGAAGTTTCAGCAATCCCATATATTATACAGTGTATAACAAAGACAAGGCTTAAAATAAAGGA-------------------------------TT--CACGTTAGAATTCTTCTTAAC---------CAAAAACAAC---TCCACA---- s panTro4.chr4 190281365 163 + 193495092 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTAGAATAGTTCAGAAG-GGCGGCAATCCCATATATTATACGGGGTATAACAAAGACCAGGCTTAAAATAATGTA-------------------------------TT--CACGTTAGAATTCGTCTTAAC---------CAAAAACAAC---TCCACA---- i panTro4.chr4 C 0 I 323 s ponAbe2.chr4 195246993 161 + 198332218 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTGGAATAGTTCAAAAGTTTCAGCAGTCCCGTATATTGTACAGTGTATAACAAAGACAAGGCTTAAAATAAAGGA-------------------------------TT--CATGTTAGCAT---TCTTAAC---------CAAAAACAAC---TCCACA---- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219066 159 + 115148730 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCTTGCTGGAATAGTTCAAAAGTTTCTTCAATCCTGTATATTACACAGTGTGTAACAAAGACAAGGCTTAAA-----GGA-------------------------------TT--CACATTAGAATTCTTCTTAAC---------CAAAAACAAC---TCCACA---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181021987 164 + 184069350 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTGGAATAGTTCAAAAGTTTCAGCAATCCTGTATATTATACAGTGTATAATGAAGACAAGGCTTAAAATAAAGGA-------------------------------TT--CACGTTAGAATTCTCCTTAAC---------CGAAAACAAC---TCCACA---- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186359135 164 + 189454096 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTGGAATAGTTCAAAAGTTTCAGCAATCCTGTATATTATACAGTGTATAATGAAGACAAGGCTTAAAATAAAGGA-------------------------------TT--CACGTTAGAATTCTCCTTAAC---------CGAAAACAAC---TCCACA---- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974418 164 + 178775436 TGATCCGGATACAAGAAAGAAGCTTGTGGAAGTTACTGAGTCATCTCCTGCTGGAATAGTTCAAAAGTTTCAGCAATCCTGTATATTATACAGTGTATAATGAAGACAaggcttaaaataaagga-------------------------------tt--CACGTTAGAATTCTCCTTAAC---------CAAAAACAAC---TCCACA---- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817218 164 + 135778131 TGATCCAGATACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCTGCTGGAATAGTTCAAAAGTTTCAGCAATCCTGTATATTATACAGTGTATAATGAAGACAAGGCTTAAAATAAAGGA-------------------------------TT--CACGTTAGAATTCTCCTTAAC---------CAAAAACAAC---TCCACA---- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199294 164 - 190850796 TGACCCAGCTACAAGAAAGAAGCTTGTGGAACTTACTGAGTCATCTCCCGCCAGAATCATTCAAAAGTTTCAGCAGTCCTGTATATTATACAGTGTATAATGAAGACAAGGCTGGAAATGAAGGA-------------------------------TT--CATGTTAGAATTCTTCTTCAC---------CAAAAACAAC---TCCACA---- i calJac3.chr3 C 0 C 0 s mm10.chr8 84687071 161 - 129401213 TGACCCA-ATTCAGGACTGAAGCTGTTGGGACCTGCTTTGCTATCTTCTGACAGACCAGATCAACA-TTTTAGCTATCTT---------------TGCCAAGAAGATAAGGTTATAGAAAAACAA-------------------------------TTTACATGTTAAAATTGTTCTTGACATAAGAAAAAAAAAACCACCAGTCCATA---- i mm10.chr8 I 35 C 0 s canFam3.chr16 15691988 181 - 59632846 TGACCCAGATACAAGAAAGAAGCTGCTGGAACTTGTTGAGTCATCTCCTG---GAATAGTTCAAAAGTTTCAGCAATCCT--------------GCATAGTGAAGATAAGGCTTTAAATAAGCGAATGCCCCGTTAGAATTCTTCTTTTTTTTTTTTT--TTCGTTAGAATTCTTCTTAac---------gaacaac-ac---tctataaata i canFam3.chr16 C 0 C 0 a score=546916.000000 s hg38.chr4_KI270785v1_alt 8955 181 + 119912 CAATTGCAACAA-TTATAGCTGGAAAAATAACTCCCAATGTTC-ACTATCCTAACACATC-AAATTTCTTCATTTCTCTATTCTCTTTTTTTAGTTTATACCCATACAAATATATCATTTTCACTTAGCTATAACCAAAGCAGAGATTCAAATTAGTATACCAGATCTACTCTAAAGAGAAAAT----------------- s ponAbe2.chr4 195247154 181 + 198332218 CAATTGCAACAA-TTATAGCTGGAAAAATAACTCCCAATATTC-ACTATCCTAACACATC-AAATTTCTTCATTTCTCTATTCTCCTTTTTTAGTTTATACCCATACAAATATATCATTTTCACTTAGCTATAACCATAGCAGAGATTCAAATTAGTATACCAGATCTACTCCAAAGAGAAAAT----------------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219225 181 + 115148730 CAATTGCAACAA-TTATAGCTggaaaaataactcccaatattc-actatcctaacaaatcaaaatttcttcatttctctattctcc-tttttagtttatacccatacaaatacatcattttcacgtagctataaccatagcaaagattcaaattagtatACCAGATCTACTCCAAAGAGAAAAT----------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022151 180 + 184069350 CAACTGTAACAA-TTATAGCTggaaaaataactcccaatattc-actat-ctaacaaatc-aaatttcttcatttctctattctcctttttcagtttctacccatacaaatgcatcattttcacttagctataaccatagcagagattcaaattagtatACCAGATCTACTCCAAAGAGAAAAT----------------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186359299 180 + 189454096 CAACTGTAACAA-TTATAGCTggaaaaataactcccaatattc-actat-ctaacaaatc-aaatttcttcatttctctattctcctttttcagtttctacccatacaaatgcatcattttcacttagctataaccatagcagagattcaaattagtatACCAGATCTACTCCAAAGAGAAAAT----------------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974582 180 + 178775436 CAACTGTAACAA-TTATAGCTGGAAAAATAACTCCCAATATTC-ACTAT-CTAACAAAtc-acatttcttcatttctctattctcctttttcagtttttaccCATACAAATACACCATTTTCACTTAGCTATAACCATAGCAGAGATTCAAATTAGTATACCAGATCTActccaaagagaaaat----------------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817382 180 + 135778131 CAACTGTAACAA-TTATAGCTggaaaaataactcccaatattc-actat-ctaacaaatc-aaatttcttcatttctctattttcctttttcagtttttacccatacaaatacatcattttcacttagctataaccatagcagagattcaaATGAGTATACCAGATCTACTCCAAAGAGAAAAT----------------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199458 179 - 190850796 AAACT--AACAA-TTATAGCTGGAGAAATACCTCCCAATATTC-CCTATCCTAACAAATC-AAATTTCTTCATTTTTCTATTCTCATTTTTCAGCTTTTACCCATACAAATACATCATTTTCACTTAGCTGTGACCGTAGCAGAGATTCGAATGAGTATACCAGATCTACTCCAAAGAGAAAAT----------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84687232 180 - 129401213 AGATTGCGATAAGTTATAGCTGGA-AAATATCTCCCAGTAGTCTACAATCGTAACTAATC-AAATTTATTCAGTTTTTAAAAATTC-TTATTAGTTTTTACTCATATAAGTACATAATTTTTACTTAGTTATGATCTCAGCAGTGATTCAAATTCCTACACAAGATCTACTGC-AAGAGAAAAT----------------- i mm10.chr8 C 0 I 167 s canFam3.chr16 15692169 196 - 59632846 aagttgtaataa-atatagctagaaaaat--ctcccagcatcccactatcttaataaatc-aattttatttatttttccattctcc-tttttagttttcacccatatgaacagatgatttttacttagttacaaccatagtggagatccaaGTGAGTATGCCAAATCTAATCCATAGAGAAAATGTAAAGGCTTGTCTTTT i canFam3.chr16 C 0 C 0 e panTro4.chr4 190281528 323 + 193495092 I a score=3276.000000 s hg38.chr4_KI270785v1_alt 9136 1 + 119912 A s ponAbe2.chr4 195247335 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219406 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022331 1 + 184069350 A i rheMac3.chr5 C 0 I 124 s macFas5.chr5 186359479 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175974762 1 + 178775436 a i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817562 1 + 135778131 A i chlSab2.chr7 C 0 I 124 s calJac3.chr3 188199637 1 - 190850796 A i calJac3.chr3 C 0 C 0 s canFam3.chr16 15692365 1 - 59632846 A i canFam3.chr16 C 0 C 0 e mm10.chr8 84687412 167 - 129401213 I e panTro4.chr4 190281528 323 + 193495092 I a score=-921.000000 s hg38.chr4_KI270785v1_alt 9137 2 + 119912 -CA s ponAbe2.chr4 195247336 2 + 198332218 -Ca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219407 2 + 115148730 -CA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186359480 2 + 189454096 -TA i macFas5.chr5 C 0 I 122 s papAnu2.chr5 175974763 2 + 178775436 -ta i papAnu2.chr5 C 0 I 122 s calJac3.chr3 188199638 2 - 190850796 -TA i calJac3.chr3 C 0 I 99 s canFam3.chr16 15692366 2 - 59632846 CT- i canFam3.chr16 C 0 C 0 e mm10.chr8 84687412 167 - 129401213 I e chlSab2.chr7 132817563 124 + 135778131 I e rheMac3.chr5 181022332 124 + 184069350 I e panTro4.chr4 190281528 323 + 193495092 I a score=11280.000000 s hg38.chr4_KI270785v1_alt 9139 38 + 119912 gccgggcgcggtggctcacgcctgtcatcccagcactt s ponAbe2.chr4 195247338 38 + 198332218 gccgggcgcggtggctcacgcctgtaatcccagcactt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219409 38 + 115148730 gccgggcgcagtggctcacgcctgtaatcccagcactt i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 15692368 36 - 59632846 ACCGGCTATGAT--CTAATGATtgttttcctaaaattc i canFam3.chr16 C 0 I 305 e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I e chlSab2.chr7 132817563 124 + 135778131 I e papAnu2.chr5 175974765 122 + 178775436 I e macFas5.chr5 186359482 122 + 189454096 I e rheMac3.chr5 181022332 124 + 184069350 I e panTro4.chr4 190281528 323 + 193495092 I a score=13540.000000 s hg38.chr4_KI270785v1_alt 9177 59 + 119912 tgggaggccgaggcgggcggatcacgaggtcaggagatcgagacccttctggctaacac s ponAbe2.chr4 195247376 59 + 198332218 tgggaggcccaggcgggcggatcaaaaggtcaggagatcgagaccatcctggctaacac i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219447 58 + 115148730 tgggaggccgaggc-agcggatcacaaggtcaggagatggagaccatcctggctaacac i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I e chlSab2.chr7 132817563 124 + 135778131 I e papAnu2.chr5 175974765 122 + 178775436 I e macFas5.chr5 186359482 122 + 189454096 I e rheMac3.chr5 181022332 124 + 184069350 I e panTro4.chr4 190281528 323 + 193495092 I a score=0.000000 s hg38.chr4_KI270785v1_alt 9236 56 + 119912 ggtgaaaccccgtctctactaaaaatacaaaaaaATTAgccgggcgcggtggcggg e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I e chlSab2.chr7 132817563 124 + 135778131 I e papAnu2.chr5 175974765 122 + 178775436 I e macFas5.chr5 186359482 122 + 189454096 I e rheMac3.chr5 181022332 124 + 184069350 I e nomLeu3.chr7b 111219505 0 + 115148730 C e ponAbe2.chr4 195247435 0 + 198332218 C e panTro4.chr4 190281528 323 + 193495092 I a score=91889.000000 s hg38.chr4_KI270785v1_alt 9292 78 + 119912 gcctgtagtcccagcactttgggaggcc-gaggcgggcggatcacgaggtcaggagatcgagaccatcccggctaaaat s panTro4.chr4 190281851 78 + 193495092 gcctgtcatcccagcactttgggaggcc-gaggcgggcggatcacgagatcaggagatcgagaccatcctggctaaccc i panTro4.chr4 I 323 C 0 s rheMac3.chr5 181022456 78 + 184069350 gcctataatctcagcactttgggaggcc-aaggcaggtggatcatgaggtcaagagattgagatcatcatggccaacat i rheMac3.chr5 I 124 C 0 s macFas5.chr5 186359604 78 + 189454096 gcctataatctcagcactttgggaggcc-aaggcaggtggatcatgaggtcaagagattgagatcatcatggccaacat i macFas5.chr5 I 122 C 0 s papAnu2.chr5 175974887 79 + 178775436 gcctataatctcagcactttgggaggccaaaggcaggtggatcatgaggtcaagagattgagatcatcatggccaacac i papAnu2.chr5 I 122 C 0 s chlSab2.chr7 132817687 78 + 135778131 gcctataatctcagcactttgggaggcc-aaggcaggtggatcacgaggtcaagagattgagatcatcatggccaacac i chlSab2.chr7 I 124 C 0 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I e nomLeu3.chr7b 111219505 0 + 115148730 C e ponAbe2.chr4 195247435 0 + 198332218 C a score=361516.000000 s hg38.chr4_KI270785v1_alt 9370 179 + 119912 ggtgaaaccccgtctctactaaaaatacaaaaaa--ttagccgggcgtggtggcggg-gcctgtagtcccagctactcgggaggctgaggcaggagaatggtgggaacccgggaggcggagcttgcagtgagctgagatcgcgcccctgcactccagcctgggcgacagagcgagactccgt s panTro4.chr4 190281929 182 + 193495092 agtgaaaccccatctctactaaaaatacaaaaaaaattagccaggcgtggtggcgggcgcctgtagtctcagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgcccctgcactccagcctgggcgacacagcgagactccgt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247435 180 + 198332218 ggtgaaaccccgtctctattaaaaatacaaaaaa--ttagccgggcgcagtggcgggcgcctgtggtcccagctactcggcaggctgaggcaggagaatggcgggaacccgggaggcggagcttgcagtgagcccagttcgagtcactgcagtccagcctgggcgacagagtgagactccgt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219505 155 + 115148730 ggtgaaaccccgtctctactaaaaatacaaaaaa--ttagccgggcgtggtggcgggcgcctgtagtcccagct------gaggctgaggcaggagaatggcgtgaaccca-----------tt-------gccgagattgcgccactgcactccagcctgggcg-cagagcgagactccgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022534 178 + 184069350 ggtgaaaccccgtctccactaaaaatacaaaaa---ttaactgggtgtggtggtgggtgcctgtagtcccagttactcagggggctgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagcaaagatcgcatcactgcactccagcct-ggtgacagagcgagactctgt i rheMac3.chr5 C 0 I 35 s macFas5.chr5 186359682 178 + 189454096 ggtgaaaccccgtctccactaaaaatacaaaaa---ttaactgggtgtggtggtgggtgcctgtagtcccagttactcagggggctgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagcaaagatcgcatcactgcactccagcct-ggtgacagagcgagactctgt i macFas5.chr5 C 0 I 18 s papAnu2.chr5 175974966 178 + 178775436 ggtgaaaccccatctccactaaaaatacaaaaa---ttaactgggtgtggtggtgggtgcctatagtcccagttactcagggggctgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagcaaagatcgcatcactgcactccagcct-ggtgacagagtgagactctgt i papAnu2.chr5 C 0 I 14 s chlSab2.chr7 132817765 178 + 135778131 ggtgaaaccccgtttccactaaaaatacaaaaa---ttaactgggtgtggtggtgggtgcctgtagtcccagttactcagggggctgaggcaggagaatggcttgaacctgggaggcggaggttgcagtgagcaaagatcgcatcactgcactccagcct-ggtgacagagcgagactctgt i chlSab2.chr7 C 0 I 14 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I a score=9525.000000 s hg38.chr4_KI270785v1_alt 9549 15 + 119912 ctc---------aaaacaaaaaaa s panTro4.chr4 190282111 15 + 193495092 ctc---------caaaaaaaaaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247615 22 + 198332218 ctc--aaaaaaaaaaaaaaaaaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219660 24 + 115148730 ctcaaaaaaaaaaaaaaaaaaaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186359878 15 + 189454096 ---------aaataaataaaaAAT i macFas5.chr5 I 18 C 0 s papAnu2.chr5 175975158 15 + 178775436 ---------aataaaataaaaaat i papAnu2.chr5 I 14 C 0 s chlSab2.chr7 132817957 15 + 135778131 ---------aaataaataaaaaat i chlSab2.chr7 I 14 C 0 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e calJac3.chr3 188199640 99 - 190850796 I e rheMac3.chr5 181022712 35 + 184069350 I a score=2548.000000 s hg38.chr4_KI270785v1_alt 9564 1 + 119912 a s panTro4.chr4 190282126 1 + 193495092 a i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247637 1 + 198332218 a i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219684 1 + 115148730 a i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186359893 1 + 189454096 A i macFas5.chr5 C 0 I 1 s papAnu2.chr5 175975173 1 + 178775436 a i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132817972 1 + 135778131 a i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188199739 1 - 190850796 A i calJac3.chr3 I 99 C 0 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I e rheMac3.chr5 181022712 35 + 184069350 I a score=22280.000000 s hg38.chr4_KI270785v1_alt 9565 7 + 119912 aTTACAA s panTro4.chr4 190282127 7 + 193495092 aTTACAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247638 7 + 198332218 aTTACAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219685 7 + 115148730 aTTACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022747 7 + 184069350 ATTACAA i rheMac3.chr5 I 35 C 0 s macFas5.chr5 186359895 7 + 189454096 ATTACAA i macFas5.chr5 I 1 C 0 s papAnu2.chr5 175975175 7 + 178775436 attacaa i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132817974 7 + 135778131 atTACAA i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188199740 7 - 190850796 ATTACAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15692404 305 - 59632846 I e mm10.chr8 84687412 167 - 129401213 I a score=353287.000000 s hg38.chr4_KI270785v1_alt 9572 101 + 119912 TTTTTTAAAGT-G-AACTGAACTTCCTCTGTGAGAAAAAGATTATCTCACCACCG---CT----GGAAGATCCTTGAAGAGGGT-GAGACACTTTGCTGTATGAATTGCGA s panTro4.chr4 190282134 101 + 193495092 TTTTTAAAAGT-G-AACTGAACTTCCTCTGTGAGAAAAAGATGATCTCACCACCG---CT----GGAAGATCCTTGAAAAGGGT-GAGACACTTTGCTGTATGAATTGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247645 102 + 198332218 TTTTTTAAAGT-G-AACTGAACTTCCTCTGAGAGAAAAAGATGATCTCACCACCA---CT----GGAAGATCCTTGAAAAGGGTGGAGACACTTCGCTGCATGAATTGCAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219692 102 + 115148730 TTTTTTAAAGT-G-AACTGAACTTCCTCTGTGATAAAAAGATTATCTCACCACCG---CT----GGAAGATCCTTGAAAAGGGTGGAGACACTTTGCTGTATGAATTGCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022754 102 + 184069350 TTTTTTAAAGT-G-AGCTGAACTTCCTCTGTGAGAAAAAGATGATCTCACCACCA---CT----GGAAGATCCTCAGAAAGTGTGGAGACACTTTGGTGTATGCATTGCAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186359902 102 + 189454096 TTTTTTAAAGT-G-AGCTGAACTTCCTCTGTGAGAAAAAGATGATCTCACCACCA---CT----GGAAGATCCTCAGAAAGTGTGGAGACACTTTGGTGTATGCATTGCAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175975182 102 + 178775436 ttttttaaagt-g-agcTGAACTTCCTCTGTGAGAAAAAGATGATCTCACCACCA---CT----GGAAGATCCTCAGAAAGTGTGGAGACACTTTGGTGTATGCATTGCAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132817981 102 + 135778131 TTTTTTAAAGT-G-AGCTGAACTTCCTCTGTGAGAAAAAGATGATCTCACCACCA---CT----GGAAGATCCTCAGAAAGTGTGGAGACACTTTGGTGTATGCATTGCAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199747 106 - 190850796 TTTTTTGAAGTGG-AGCTGAACTTCCTCTGTGAGAAAAAGATTATTTCACCACCACCGCT----GGAAGATCCATGAAAGCCGTGGAGACGCTCTGCTCTATGCTCCGCAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84687579 102 - 129401213 TTTTTTTAAGT-GAAGCTGAGCTCCCTTTTTGAGAAAGA---TATTTAAGTACTT---CTGATAGAAAGATCCTTAGAAAGTCTGAAAA--CTTAGCTATTTGCATTGCAA i mm10.chr8 I 167 I 731 s canFam3.chr16 15692709 106 - 59632846 TTTGGTAAGTG-G-AGCTGGACTTCCTTTGTGAGAAAAACATTATTTCACCAGTG---CTGGTAGGAAAATCCTTGAGAAGTGTGGAAGCCCTTTGTTCCATGCATTGCAA i canFam3.chr16 I 305 C 0 a score=544549.000000 s hg38.chr4_KI270785v1_alt 9673 175 + 119912 ACATATTCTCAATGTTGCCTGCTGCTTTGATCCCAGACGTGACCCAGACCCATGTT--AAAACCAACTCCTTACAGGTTTATTCATCACCCCACTTTCCTTCCAGTTACGGCTTTGCGAGTCTAGGAAACAGGCTCTCAGTAAAGGAAACACAGCGGCCATC-AACGCAGTCT-AGCTG s panTro4.chr4 190282235 169 + 193495092 ACATATTCTCAATGTTGCCTGCTGCTTTGATCCCAGACGTGACCCAGACCCATGTT--AAAACCAGCTCCTTACAGGTTTACTCATCACCCCACTTTCCTTCCGGTTACGGCTTTGCGAGTCTAGGAAACAG----TCAGTAAAGGAAACA--GCGGCCATC-AACGCAGTCC-AGCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247747 175 + 198332218 ACATATTCTCAATGTTGCCTGCTGCTTTGATCCCAGACATGACCCAGACCCATCTT--AAAACCAACTCCTTCCAGGTTTATTCACCACCCTACTTTCCTTGCAGTTACGGCTTTGCGAGTCTAGGAAACAGTCTTTCAGTAAAGGAAACACAGCGGTCATC-AACGCAGTCT-AGCTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219794 175 + 115148730 ACATATTCTCAATGTTGCCTGCTGCTTTGATCCCAGACATGACCCAGACCCATCTT--AAAACCAACTCCTTACAGGTTTATTCACCACCCTACTTTCATTCCAGTTACGGCTTTGCGAGTCTAGGAAACAGTCTTTCAGTAAAGGAAACGCACCGGTCATC-AAAGCAGTCT-AGCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181022856 175 + 184069350 ACATACTCTCAATTTTGCCTGCTGCTTTGATCCCGGACATGACCCAGACCCATCTT--AAAACCAACTCCTTACAGGTTTATTCACCACCCTGCTTTCCTTCCATTTACGGCTTTGCGAGTCTAGGAAACAGTCTTTCAGTGAAGGAAACACAGTGGTCATA-AACGCAGTCT-AGCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186360004 175 + 189454096 ACATACTCTCAATTTTGCCTGCTGCTTTGATCCCGGACATGACCCAGACCCATCTT--AAAACCAACTCCTTACAGGTTTATTCACCACCCTGCTTTCCTTCCATTTACGGCTTTGCGAGTCTAGGAAACAGTCTTTCAGTGAAGGAAACACAGTGGTCATA-AACGCAGTCT-AGCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175975284 175 + 178775436 ACATATTCTCAATTTTGCCTGCTGCTTTGATCCCGGACATGACCCAGACCCATCTT--AAAACCAACTCCTTACAGGTTTATTCACCACCCTGCTTCCCTTCCATTTACGGCTTTGCGAGTCTAGGAAACAGTCTTTCAGTGAAGGAAACACAGTGGTCATA-AACGCAGCCT-AGCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132818083 175 + 135778131 ACATATTCTCAATTTTGCCTGCTGCTTTGATCCCGGACATGACCCAGACCCATCTG--AAAACCAACTCCTTACAGGTTTATTCACCACCCTGCTTCCCTTCCATTTACGGCTTTGTGAGTCTAGGAAACAGTCTTTCAGTGAAGGAAACACAGTGGCCATA-AACGCAGTCT-AGCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188199853 171 - 190850796 ACATATTCCTGACCAAACCT-CTGCTTTGTTCCCAGACATGACCCAGACCTGTCTT--AAAACCAAGTCATTACACGTTTATTCACCACCGTGCTTTCCTTCCAGTTACGGCTTTGAGGGTCTCGGAAACAGCCTTTCAGTAAAGGAAACGCA---GCCATA-AATGCAGTCT-AGCTG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15692815 175 - 59632846 --ATATTGTCCATTTTATCTGCTGCTTTTGGTCCTTACTT--CTTGAGATCATCTCAAAAAATAAACTCCCTGAGGTTTTATTTACCATCATACTCCCCTTCCAGGCAGAGTTTTGAGAGACTAGGAGACCGTCTTTCAGTAAAGGAAACACAGCAATGATATAACACGGTCTGGGCTG i canFam3.chr16 C 0 C 0 e mm10.chr8 84687681 731 - 129401213 I a score=245286.000000 s hg38.chr4_KI270785v1_alt 9848 74 + 119912 -TGCGGAAGGAGCGCTCAGCCCCGGCGAGAGGTGTGGCTGCTGCCGCCCCTTTTCGGGGGACTCCTCCATGACGT s panTro4.chr4 190282404 74 + 193495092 -TGCGAAAGGAGCGTTCAGCCCTGGCGAGAGGTGTGGCTGCCGCCGCCCCTTTTCCGGGGACTCCTCCATGATGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247922 74 + 198332218 -TGCGGAAGGAGCCTTCAGCCCTGGCGAGAGGTGTGGCTGCTGCCGCCCCTTTTCAGGGGACTTCTACGTGATGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111219969 74 + 115148730 -TGCGGAAGGAGCTTTCAGCCCTGGAGAGAGGCGTGGCTGCTGCCGCCCCTTTGCGGGGGACTTCTGCATGATGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181023031 74 + 184069350 -TGTGGAAGGAGCATTCAGCCCTGGCAAGAGGTATGGCTGCTGCCGCCCCTTTTCAGGGGACTTCTACATGATGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186360179 74 + 189454096 -TGTGGAAGGAGCATTCAGCCCTGGCAAGAGGTATGGCTGCTGCCGCCCCTTTTCAGGGGACTTCTACATGATGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175975459 73 + 178775436 -TGTGGAAGCAGCACTCAGCCCTGGCAAGAGGTATGGCTGCTGCCGCCCC-TTTCAGGGGACTTCTACATGATGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132818258 74 + 135778131 -TGTGGAAGCAGCACTCAGCCCTGGCAAGAGGTATGGCTGCTGCCGCCCCTTTTCAGGGGACTTCTACATGATGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188200024 74 - 190850796 -TGAGGAAGGAGCATTTAGCCCTGGGAAGAGGTATGGCTGCTGCTGTCCCTTTTCAGGCGACGTTTACATGATGT i calJac3.chr3 C 0 C 0 s mm10.chr8 84688412 71 - 129401213 -TACAAAAGAAATGTTAA--CCTGGGAAGAAATGCTGTTGGTGTT-TTCATTTTCAATAGATTTTTATATGCTAT i mm10.chr8 I 731 C 0 s canFam3.chr16 15692990 75 - 59632846 TTAGGAAAGGAGTACTAAGCCCTGGAGAGAGGCGCTGATGCTGTTGTCATTTCTGGGGGGGTTTCTAGATAATGT i canFam3.chr16 C 0 I 714 a score=3069686.000000 s hg38.chr4_KI270785v1_alt 9922 911 + 119912 TGCGTTATTTGAATTTGATGTTCAGATAACACAAGTTTTAAAGATACATGTAAAAATTGTTCTACAATATGGAAGA--AACGTGATTTTGGTGGTAGAAGATGACAGCCTGGGGGATATGCGGTGGGACTAGTTGGAGGCAAAGCTGCACATTTGGCAAAACTTGTCTTAGAATC-ACCTTGCCC------------CTTCTTCTCCTTCTCATC---CTCACAGACACTCTGTATTCCCCAACTAGACCGAGAGCT---CTTGATGAGTTAATTAACGCCGAGGTTTTAGTGGCTCCATTCCCAGCCCTTCGGGAAGGGTATAAATTTCAGAAGGAAAACCTCAGGGTACAATATTTAA----------------CCCACGTCAGTGGTtctctaagagcggaatttcaagtgccgcattcctgg--------------------------aaggggaggaatttgctggattaaaggcttcctggcctgcaattgtgttatatgagagcatacctactcaatacgtataaagacaccttgAAAAAATATTCAAGATGTACGAAAAGGAAATTGGGGAGATAACTGCAAGACTTAGAGAAGA-------ATGAGGG--ACAGGAAATTGCATATCAGCTTTATT----GAAAGAAAGGGTATTTGTTGTGTCCGCTGTGGGAATGCTCTATGCCTATCGCCTCTTCTCAAGCACGACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAGGCAAATATTTCCCTCCAGGGATTTAGTAAGCAATTAAGCAAAATCACTGCTTTGAGCACTTATGTAATATTAGCGATTTCTTGGTCCTCTT---GACATTATATTCGTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAATCTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAACGC----TAAAATTAGGTGACATCA--TTGGCAA----------------------------------------------------------------------------TACTCCCTGG-ACCC----------------------CCAGACT-----CTGCTG s panTro4.chr4 190282478 912 + 193495092 TGCGTTATTTGAATTTGATGTTCAGATGACACAAGTTTTAAAGATACATGTAAAAATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGAAGATGGCAGCCTGGGGGATATGAGGTGGGACTAGTTTGAGGCAAAGCTGCACATTTGGCAAAGCTTGTCTTAGAATCTACCTTGCCC------------CTTCTTCTCCTTCTCATC---CTCACAGACACTCTGTATTCCCCAACTAGACCGAGAGCT---CTTGATGaattaattaacgccgaggtgttagtggcttaattcccagcccttcgggaagggtataaatttcagaaggaaaacctcagggtacaatatttaa----------------cccacgtcagtggttctctaagagcggaatttcaaatgccgcattcctgg--------------------------aaggggaggaatttgctggattaaaggcttcctgacctgcaattatattatattagagcatacctactcaatacgtataaagacaccttgAAAAAATATTCAAGATGTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ACAGGAAATTGCATATCAGCTTTATT----GAAAGAAAGGGTATTTGTTGTGTCCGCTGTGGGAATGCTCTATGCCTATCGCCTCTTCTCAAGCACGACA---CAGTCAATTCAGTGATAATCAAGATCCATCAAGGCAAATATTTCCCTCCAGGGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTGAGCACTTATGTAATATTAGGGATTTCTTGGTCCTCTT---GACATTATATTCGTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAACGC----TAAAGTTAGGTGACATCA--TTGGCAA----------------------------------------------------------------------------TACTCCCTGG-ACCC----------------------CCAGACT-----CTGCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195247996 908 + 198332218 TGCGTTATTTGAATTTGATGTTCAGATGACACAAGTTTTAAAGATACATGTAAAAATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGAAGATGACAGCCTGGGGGATATGAGGTGGGACTAGTTTGAGGCAAAGCTGCACATTTGGCAGAGCTTGTCTTAGAATC-ACCTTGCCC---------------CTTCTCCTTCTCATC---CTCACAGACACTCTGTATTCCCCAACTAGACCGAGAGCT---CTTGATGAATTAATTAACGCCGAGGTTTTAGTGGCTTAATTCCCAGCCCTTCGGGAAGGGTATAAATTTCAGAAGGAAAACCTCAGGGTACAATATTTCA----------------CCCATGTCAGTGGTTCTCTAAGAGCGGAATTTCAAGTGCTGCATTCCTGG--------------------------AAGGGGAGGAATTTGCTGGATTAAAGACTTCCTGACCTGCAATTATATTATATTAGAGCATACCTACTCAATACGTGTAAAGACACCTTGAAAAAATATGCAAAATGTATGAAAAGGAAATTAGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ATAGGAAATTGCACATCAACTTTATT----GAAAGAAAGGGTATTTGTTGTGTCTGCTGTGGGAATGCTCTATGCCTATCACCTCTTCTCAAGCACGACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAGGCAAATATTTCCCTCCAGGGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTGAGCACTTATGTAATATTAGGGATTTCTTGGTCCTCCT---GACATTATATTCGTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTC--------TCCTAGTAGCTAATGC----TAAAATTAGGTGACAGCA--TTGGCAA----------------------------------------------------------------------------TACTTGCCGG-ACCC----------------------CCAGACT-----CTGCTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111220043 905 + 115148730 TGCGTTATTTGAATTTGATGTTCAGATAGCACAAGTTTTAAAGATACATGTCAAAATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGAAGATGACAGCCTGGGGGATATGAGGCGGGACTAGTTTGAGGCAAAGCTGCACATTTGGCAAAACCTGTCTTAGAATC-ACC-TGCCC------------CTTCTTCTCCTTCTCATC---CTCACAGACACTCTGTATTCCCCAACTAGACCGAGAGCT---CTTGATGaattaattaacgctgaggttttagtggcttaattcccagcccttcgggaagggtataaatttcagaaggaaaacctcagggtacaatatttaa----------------cccatgtcagtggttctctaagagcagaatttcaagtgctgcattcctgg--------------------------aaggggaggtatttgctggattaaaggcttcctgacctgcaa-----ttatattagagcatacctactcaatacgtgtaaagacaccttgAAAAAATATTCAAGATGTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ATAGGAAATTGCCTATCAACTTTATT----GAAAGAAAGGGTATTTGTTGTGTCTGCTGTGGGAATGCTCTATGCCTATCGCCTCTTCTCAAGCACGACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAAGCAAATATTTCCCTCCAGTGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTGAGCACTTATGTAATATTAGGGATTTCTTGGTTCTCTT---GACATTATATTCGTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAACGC----TAAAATTAGGTGACATCA--TTGGCAA----------------------------------------------------------------------------TACTCCCCGG-ACCC----------------------CCAGACT-----CTGCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181023105 876 + 184069350 ---GTTATTTGAATTTGAGGTTCAGTTAACACAATTTTTAAATATACATGTAAAGATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGCAGATGACAGCCTAGGGGATATGAGGTGGGACTAGTTTGAGGCAAAGCTGTACATTTGGCAGAACTTGTCTCAGAATC-ACCTTGCCC---------------CTTGTCCTTCTCATC---CTCACAGATACTCTGTATTCCCCAACTACACCGAGAGCT---CTTGATGAATTAATTAACACCGAGGTTTTAGCAGCTTCATTCCCGGCCCTTCGGGAAGGGTATAAATTTCAGAAGGAAAACCTCGGGGTACAATATTTAA-----------------CCATGTCCGTGGTTCTCTAAGAGCGGAATTTCAAGTGCTGCATTCCTGG--------------------------AAGGGGAGGTATATGCTGGATTAAAGGCTTCCTG---------------------------ACCTACTCAGTACGTGTAAAGACGCCTTGAAAAAATATTCAAGATGTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ATAGGAAATTGCATATCAACTATATT----GAAAGAAAGAGTATTTGTTGTGTCTGCGGTGGGAATGCTCTATGCCTATCGCCTCGTCTCAAGCACAACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAGGCAAATGTTTCCCTCCAGGGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTAAGCACTTATGTAATATTAGGGATTTCTTTGTCCTCTT---GACATTATATTCCTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAAGGC----TAAAATGAGGTGACATCA--TTGGCCA----------------------------------------------------------------------------TACTCCCCGG--TAC----------------------CCAGACT-----CTGCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186360253 880 + 189454096 ---GTTATTTGAATTTGAGGTTCAGTTAACACAATTTTTAAATATACATGTAAAGATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGCAGATGACAGCCTAGGGGATATGAGGTGGGACTAGTTTGAGGCAAAGCTGTACATTTGGCAGAACTTGTCTCAGAATC-ACCTTGCCC---------------CTTGTCCTTCTCATC---CTCACAGATACTCTGTATTCCCCAACTACACCGAGAGCT---CTTGATGAATTAATTAACACCGAGGTTTTAGCAGCTTCATTCCCGGCCCTTCGGGAAGGGTATAAATTTCAGAAGGAAAACCTCGGGGTACAATATTTAA-----------------CCATGTCCGTGGTTCTCTAAGAGCGGAATTTCAAGTGCTGCATTCCTGG--------------------------AAGGGGAGGTATATGCTGGATTAAAGGCTTCCTG---------------------------ACCTACTCAGTACGTGTAAAGACGCCTTGAAAAAATATTCAAGATGTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ATAGGAAATTGCATATCAACTATATTGAAAGAAAGAAAGAGTATTTGTTGTGTCTGCGGTGGGAATGTTCTATGCCTATCGCCTCGTCTCAAGCACAACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAGGCAAATGTTTCCCTCCAGGGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTAAGCACTTATGTAATATTAGGGATTTCTTTGTCCTCTT---GACATTATATTCCTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAAGGC----TAAAATGAGGTGACATCA--TTGGCCA----------------------------------------------------------------------------TACTCCCCGG--TAC----------------------CCAGACT-----CTGCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175975532 904 + 178775436 ---GTTATTTGAATTTGAGGTTCagttaacacaatttttaaatatacatgtaaagATTGTTCTACAATATGGAAGA--AACGTAATTTTGGTGGTAGCAGATGACAGCCTAGGGGATATGAGGTGCGACTAGTTTGAGGCAAAGCTGTACATTTGGCAGAACTTGTCTCAGAATC-ACCTTGCCC---------------CTTCTCCTTCTCATC---CTCACAGATACTCTGTATTCCCCAACTACACCGAGAGCT---CTTGATGAATTAATTAACACCAAGGTTTTAGTGGCTTCATTCCCGGCCCTTTGGGAAGGGTATAAATTTCAGAAGGAAAACCTCAGGGTACAATATTTAA-----------------CCATGTCCGTGGTTCTCTAAGAGCGGAATTTCAAGTGCTGCATTCCTGG--------------------------AAGGGGAGGTATATGCTGGATTAAAGGCTTCCTGACCTGCAATTATATTATGTTAGAGCATACCTACTCAGTACGTGTAAAGACGccttgaaaaaatattcaagatgTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------AATAGGG--ATAGGAAATTGCATATCAACTATATT----GAAAGAAAGAGTATTTGTTGTGTCTGCGGTGGGAATGCTCTATGCCTATCGCCTCGTCTCAAGCACAACA---CAGTAAATTCAGTGATAACCAAGATCCATCGAGGCAAATGTGTCCCTCCAGGGATTTAGTGAGCAATTAAGTAAAATCACTGCTTTAAGCACTTATGTAATATTAGGGATTTCTTTGTCCTCTT---GACATTATATTCCTCA------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAAGGC----TAAAATGAGGTGACATCA--TTGGCCG----------------------------------------------------------------------------TACTCCCCGG-ACCC----------------------CCAGACT-----CTGCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132818332 904 + 135778131 ---GTTATTTGAATTTGAGGTTCAGTTAACACAATTTTTAAACATACATGTAAAAATGGTTCTACAATATGGAAGA--CACATAATTTTGGTGGTAGAAGATGACAGCCTAGGGGATATGAGGTGCGACTAGTTTGAGGCAAAGCTGTGCATTTGGCAGAACTTGTCTCAGAATC-ACTTTGCCC---------------CTTCTCCTTCTCATC---CTCACAGATACTCTGTATTCCCCAACTATACCGAGAGCT---CTTGATGAATTAATCAACACCGAGGTTTTAGTGGCTTCATTCCCGGCCCTTCGGGAAGGGTATAAATTTCAGAAGGAAAACCTCAGGGTACAATATTTAA-----------------CCATGTCAGTGGTTCTCTAAGAGCGGAATTTCAAGTGCTGCATTCCTGG--------------------------AAGGGGAGGTATTTGCTGGATTAAAGGCTTCCTGACCTGCAATTATATTATATTAGAGCATACCTACTCAATACGTGTAAAGACGCCTTGAAAAAATATTCAAGATGTATGAAAAGGAAATTGGGGAGATAATTGCAAGACTTAGAGAAGA-------ATGAGGG--ATAGGAAATTGCATATCAACTATATT----GAAAGAAAGAGTATTTGTTGTGTCTGCGGTGGGAATGCTCTATGCCTATCGCCTCGTCTCAAGCACAACA---CAGTAAATTCAGTGATAATCAAGATCCATCAAGGCAAATGTTTCCCTCCAGGGATTTAGTAAGCAATTAAGTAAAATCACTGCTTTAAGCACTTATGTAATATTAGGGATTTCTTTGTCCTCTT---GACATTATATTCCTCT------------TTAGCAA------------TTGGTTCAGCAG--------GTCTCCTAAAACTCT------------TCTCTCATGGAGCATTCAAAATT-------CTG--------TCCTAGTAGCTAAGGC----TAAAATGAGGTGACATCA--TTGGCCG----------------------------------------------------------------------------TACTCCCCAG-ACCC----------------------CCAGACT-----CTGCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188200098 903 - 190850796 TGCATGATTTGAATTTGATGTTCGGGTAACACAGTTGTTAAAGGTACATGTAAAAATTGTTCTAAAATATGGAAGA--AATGTAATTTTGGTGGTAGAAGATGACAGGCTTGGGGATCTGAGATGGGACTGGTTTGAGGCAAAACTGTAAATCTGGCAAAACTCGTCTGAGAATC-ACCTTGTCT---------------CTTCTCCTTCTCCTC---CTCAC-GATGCTCTGTATTCCCCAACTGTACTGAGAGCT---CCTGATGAATTAATTAACACTGAGGGTTCAGAGGCTTAATTCCCAGCCCTTCGGGAAGGGTATAAATTTCAGAAGGGAAACCTCAGGGTACAATATTTAA----------------CCCATGTCAGTGGTTCTCTAAGAGTGGAATTTCAAGTGCTGCATTCCCGG--------------------------AAGGGGAAGTATTTGCTGGATTAGAGGCTTCCTGACGTGCAATTATATTATATTAGAGCACACCTACTCAACATGTGTGAAGACACCCTGAGAAAATATTCAAGACGTGTGAAAAGGAAATCGGCGAGATAATCACAAGACTGAGAGAAGG-------ATGAGGG--ATAGGAAATGGCATATCGACTTTATT----GAAAGAAAGGATATTTGTTGTGTCTGCTGTGCGAATGCTGTATACCTATTGCCTCTTCTGAAGCACAACACTTCAGTAAATTCAGTGATAATCACGATCCGTCAATGCAAATATTTCCCTCCAGAGATTCAGTAAGCAATTAAGTAAGATCACTGCTTAGAGCACTCACGTAATGTTAG-GATTTCTTGGTCCTCTT---GACACTGTGTTCCTCT------------TTAGAAA------------TTGGTTCGACGG--------GTCTCCTAAAACTCT------------TCAGTCACGGAGCATTCAAAATT-------CTG--------TACTAGTA------GC----TCAAATTAGGTGACATCA--TTGGCAA----------------------------------------------------------------------------CAGTCTCTGG-AGCC----------------------CCAGACT-----TCGCTG i calJac3.chr3 C 0 C 0 s mm10.chr8 84688483 1033 - 129401213 TATATGATTTAAGTTTGATAACTAGATAAGCTGATTAC--------CATGTTAAA--------AAGAAATGGAATAAGAATGTAATTTTGGTGCTAGGAGATCAAAACCTGGGGCATATGATATGGAG--AGCTTCAGATGAA-------------TGAATTCTCTCCCTTCTTC-TCTTTGTGGTT----------TTTCTTCTCTATCACGTA---GTCACAGAAA--CTATACGAGCAAACTATAC--AGAGTT---CTTG------------ACACC------TTAGTATCTTCATTACCAGCCATTCTGGAGGGGCATACATTTTGTAAAAATTACCTCAGGGGACCTAAGTGAGGgtttgtttgtttgtttgcttgcttgtttttttCCTAG------ATTCAAAGGGACATATTCCTGGAAGAAGATCTATGAAGGAGACGTATAAAGGAGATGTATGTTCCCAATTAAAGGATTCCTGACCTGCAATTATATCAT----------ATCTAC------------------ACCTGGAAAAGTTGTTAAGAACTTTG-GAAGGGAATTGAGTAGTTAATCTTAAGGGTGAGAGAAAAGAGAGATATGAGAGAAATAGGAAATGGCAAA-CACCTTCACT----G-AAGAAATGATGTTTGTCG-GCACTTGGAGTGAGTGCTA-GTACTTAGCCTCTGCCCTGAAGAATGGTG---TATC--ATGGACTGAAAACTGGAATCTGCCCAGACAA--GATTCCCTCCAGGGATTCAGTGA-CTACCACGTGAAGGCACATCTTTGAATACCTCCACAAT-TTGAGGATTTATT-GTTCTCTT---GAGCTATAACTCTTCTGAAACCTTACCCTCAGCGAGCTTTCCCCATTCTGGTACAGCAACTGCCAGCATCTTCAGGAAGTCTGGTtgatgtggcttgcgtgtgaaatgttctccattggcccccctgtggttggttcctagctggtgctgctttttgaatggttgtggcatct--ttagttagtagaaccttgatggagaaagtaggccattttgtgtgggccttgagagcttggagcttagctgtagacttcttgtttactctctgt-ttctggactgcataagtgcattgtgaccagactgcctcctgctg i mm10.chr8 C 0 I 124 s canFam3.chr16 15693779 912 - 59632846 tGCATTATTTGAATTTGATGACCAGGTAACACAACTTTCAAAGGTACACATAAAAATTTTTCTAAAATATGGAAGAAAAATATAATTTTGGTGATAG-AGATCACAATCTGGAGGATAGGAAATGGAGCGAGTTTTAGGCAAACCAGTCAATGTAGTAAAACTTATCTTTGAATT-ATTTTACAACTCCTTTTTCTATTCTTTCTCCTTCTTGTCCTACTCACTGAcatcatgtattcccaaactgtac--agagctctacttggtggattaattaacacagaggttttagtggcttaattaccaact-gtctggaaggatataaattgtgtaaggagaacctcagggaacaatatttaa-----------------ccaagtgagtggttctccaatagtggaatttcaagAGCTATATTCCCAG--------------------------AAGGGGAGGTGTTTGCTGGA-------CTTCTTGACCTGCAATTATATCATCTTAGAGTAGAACTGTACAGTATACATAAAGACACCTTGAGAA--TATTCAAGAAGTTTGGAAAGGCAGTGGGCTAGATCATCTCAAGACTTAGAGAAAA-------ATAGGGA--ACAGGAAATTGCAAATCATCTTTACT----GAAAGGA-------TAGTCGTGTCTGCTGTGTGATTGCTCTAATCCCATCACCTCTTCCAAAGAACGACA---AGGGAAATTCAGTGATTATTAGAATCCATCAAGGCAAATATTTCCCTTCAGGGATTTAGTAAGCAATTAAGCGAAATCACTTCTTTGAACACTCCTGTAATATCAG-GACTTATTGGTCTTCTTAAAAATATTGTATATTTCT------------TTAGCAA------------CTGGTTCAA-----------GTCTCCTAACACTCC------------TTTCTTAAGGAACATTCAAAATT-------CTG--------CTCTGGTGACCAAGGC----TAAGATTAGATGAAATCATTTTAGCAA----------------------------------------------------------------------------TATTTTTCAGAAGTC----------------------CCAAACT-----CTGCTG i canFam3.chr16 I 714 C 0 a score=762873.000000 s hg38.chr4_KI270785v1_alt 10833 212 + 119912 AGGTATAGAAACATGGCCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGATATGTTTAGGGATAGTGTGATTTTTGACACAGAAAGAAAGAAAAATCTGCAG-TTGATTTTTCAATCGCAAGGTAGCTGCTAAAATAGTGCATGTCTACCTGAATAAAATTTAAAGATATACTGAAAGAAAAATAAT----AAAATAGTAATATTTAGTTAA s panTro4.chr4 190283390 212 + 193495092 AGGTATAGAAACATGGCCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGATAGGTTTAGGGATAGTGTGATTTTTGACACAGAAAGAAAGAAAAATCTGCAG-TTGGTTTTTCAATCGCAAGGTAGCTGCTAAAATAGTGGATGTCTACCTGAATAAAATTTAAAGATACACTGAAAGAAAAATAAT----AAAATAGTAATATTTAGTTAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195248904 212 + 198332218 AGGTATAGAAACATGGCCAGGTTGGTCCTTAG--TCTGCGGTCTTTGGGTCATGGGACATGTTTAGAGATAGTGTGATTTTTGACACAGAAAGGAAGAAAAATCTGCAG-TTGGTTTTTCAATCACAAGGTAGCTGCTAAAATAGTGCAGGTCTACCTGAATAAAATTTAAAGATATACTGAAAGAAAAATAAT----AAAATAGTAAGATTTAGTTAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111220948 212 + 115148730 AGGTATAGAAACATGGCCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCTTGGGACATGTTTAGAGATAGTGTGATTTTTGACACAGAAAGAAAGAAAAATCTGAAG-TTGGCTTTTCAATCACAAGGTAGCTGCTAAAATGGTGCATGTCCACCTGAATAAAATTTAAAGATATACTGAAAGAAAAATAAT----AAGATAGTCATATTTAGTTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181023981 212 + 184069350 AGGTATGGAAACAGGACCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGACATGTTTAGAGATAGTGTAATTTTTGACACAGAAAGAAAGAAAAATCTGCAG-TTGGTTTTTCAATCACAATGTAGCTGCTAAAATAGTGCATGTCTACCTGAATAAACTTTAAAGATATACTGAAAGAAAAATAAT----AAAATAGTAATATTTAGTTAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186361133 212 + 189454096 AGGTATGGAAACAGGACCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGACATGTTTAGAGATAGTGTAATTTTTGACACAGAAAGAAAGAAAAATCTGCAG-TTGGTTTTTCAATCACAATGTAGCTGCTAAAATAGTGCATGTCTACCTGAATAAACTTTAAAGATATACTGAAAGAAAAATAAT----AAAATAGTAATATTTAGTTAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175976436 212 + 178775436 AGGTATGGAAACAGGACCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGACATGTTTAGAGATAGTGTAATTTttgacacagaaagaaagaaaaatctgcag-TTGGTTTTTCAATCACAATGTAGCTGCTAAAATAGTGCATGTCTACCTGAATAAACTTTAAAGacatactgaaagaaaaataat----aaaatagtaatatttagttac i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132819236 209 + 135778131 AGGTATGAAAACAGGACCAGGTTGGTCCTTAG--TCTGGGGTCTTTGGGTCATGGGACATGTTTAGAGATAGTGTAATTTTTGACACAGAAAGAAAGAAAAATCTGCAG-TTGGTTTTTCAATCACAATGTAGCTGCTAAAATAGTGGGTGTCTACCTGAATAAACTTTAAAGATATACTGAAAGAAA---AAT----AAAATAGTAATATTTAGTTAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188201001 193 - 190850796 AGTTACAGAACCATGGCCAGGTTGGTCCTTTG--TCTGGGGTCTTTGAGTCATGAGATTCGTTTAGAGACAGGGTGATTTTT-------------------ATCTGCAG-TTGGTTTTTCAATCACACTGTAGTTGCTAAAATAGTGCATGTCTACCTGAATAAAATTTAAAGAAATGCTGAAAGaaaaataat----aaaatagtaatatttatttac i calJac3.chr3 C 0 C 0 s mm10.chr8 84689640 213 - 129401213 AGATATTGAACCATGATCAGGTTGATCCTTTT--TCTGGGGCCTATGGGTCATGAGACATGCATAGAAATACATTGATTTTTGACATATAAAGAAATAAATATTTTCAGATTAAAAAAAAAGTCGTGTGGTAATTACTCAAATAGTATATAATTCTTTCAACCACATTTGATGATA---TGGAAAGAAAATAATGTTAAAAATAGT-GTGTTTATTtga i mm10.chr8 I 124 I 526 s canFam3.chr16 15694691 208 - 59632846 GGGTGTAGGAGCATGGCTAGGTTGTTTCTTATCCTCCGAGGCCTTTAGGTCATG-GACATGCTTTGAGACATGGTGA-TTTTGGCATATAAAGAAACAAAAATCTGCAG-TTGGTTTCTTGATCACTTGGTAGTTGCTAAAATAGTACATATCTATTTAAATCAAATTCGA-GATACGTTGAAAGAAAAATGAT---AAAAATAGTAGTATTTAC---- i canFam3.chr16 C 0 C 0 a score=27063.000000 s hg38.chr4_KI270785v1_alt 11045 8 + 119912 TTTTATAT s panTro4.chr4 190283602 8 + 193495092 TTTTATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195249116 8 + 198332218 TTTTATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111221160 8 + 115148730 TTTTATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181024193 8 + 184069350 TTTTATAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186361345 8 + 189454096 TTTTATAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175976648 8 + 178775436 ttttatat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132819445 8 + 135778131 TTTTATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188201194 8 - 190850796 ttttatat i calJac3.chr3 C 0 C 0 s canFam3.chr16 15694899 8 - 59632846 TTTTAGAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84689853 526 - 129401213 I a score=11630275.000000 s hg38.chr4_KI270785v1_alt 11053 3116 + 119912 ATTCATTTCCCAATCTACTTTCATTGGAATTACATATAAACATAAATAAATTCCTTAAGCCAATATTCGAAGGTTCT-ATTCATTTTCTTTTCTAAGAAATGTATTGACATAA------------------------------ATAAAACTGTGCTATTTAGAAAAAGTACTTATGGATTCAATTGATTTGGCTCTATTCTTCCCAC-------------CA-----------------GTTTT-----------TTTT-------TTAAGAAGGCAGCTCATTTATGTGGTGATGTAGCAGTTCGTGTCACAAGCAAATTAAAATAAAAAATGTCCAC-TTCTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGTTTTAAAAATTCATTCAATTATATTTGGCCAAATACAAAATATTAACTTGAGTTA-CATTGAGTATTTAATAGTTAGCAAAACTTATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTC-TAATAAAGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAATTGACAAGCAGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCATCACTGGTTCAAATGTTTTTTATTTCT-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAATGCGTCAGTGTGGCGAGTTGATGACAATTG-CTGAGCTGAGTGAGAGGCATGGTTTGGAAATTCTCTTTGTTCTTTGC---GGCTCTGTCCTGTGACA--CTGCCA-TTATCCTTTCGAGTGGAGGCTGGGATAATGGGCCTTAGAGAGGGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCACTTGGGCCCTTTGACATGCTCTTCTAGATATTATGATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TCAGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACACGTTGAGCATGACAAACTTGCcatttttgccttcctccatttttagacacatgactctattaagggaaatttaatccgtatgtttctgattcccttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactctTGACATGAGCCATCCT-ACTGTGTAT-TAGTGCCAACGGCCATCAGAACCGTCTTGATTGCTGAGATGACTCCAGGACCCCAACCAACCGCCAACTT----GTGTTTCCCTAATCAGTCTACTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCTGAGCATTTTTGT-------------------------------GACTTCTGTGAGAGCTATTGAATTTGGCACTGTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACAAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAATACACAGAAATTATTTCAGCGACTCAGTTTCCTAGTGGAGAAGATAACATGGACG--------TTTTAGAAAATAAAATGCATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTCGTTTGATTTATACTCAACAGTTGTTGTAAGTAAAAACTAAGCTCCATTTCCCAGGAAATTTATAGCTTAGACAAGCACCAGCGTTGTCACGGTGGTTCCCACTGCAGAATGCACTGGAAGTGATTTCTTCCTGTAG-------------GTTTTCAGAGGATCCTACTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGCTGATCTA---GGTTAAAAGATTTA---AAGAAGTTTCAAAGGTAGCCTAGGAGAAAC-AGTGAGAAATAATTCTAGAAACAAGAGAGTTCCGATAATAAACACTCAAGTGAAGAGAGCTCAGGCAGGCAGAATGCTACTCCTCTCCTTTA-GGGCACTGCAAGTCAGCGCTCTGTAGACAGCATTTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACAGAT----ATATcaggattgcatagtggctgcatgcccaggggctctggagtcagactgcctggtggtttagagccagac----t------------gtatcactggatctgtgctcttggataaacgagacaaattataggacctgtttaa-ttgggctgttgtgaggattaaagaggatgctacatgtgaaagtcctggtagagtcttgataaat------attag-cgT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGG--CTAGGACTAGGGAATAGTATAACAAGGGCGCAATCGCTCCGGTGTAAGTTAAACAC---TGGGAATTATGAGCATCTCATGTTCTTtcatcttcctagaaatccgcagctatgtccaaggctttaagtgacagttgtttcttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGCCACTACCAGCCTAACcttcagctcttctcactgaactactggccctttctgcagctggaatgttcgtttcatgctcc-gtaactttgcatgtgctgttcccgccgtcattagtacccctacttcttgtccatctggcacattgctgctcatccttccgtgctcaagcaccatgtcctctgcaaaagcctctgacttccttttgctgatttaag-----------cgttcctctcttt-------acgcgtttatggca-ctctctcgcatttccttatagctctcatgaagtgacactggaaatcgtgtgtgtgcctgtctccacactcccctgtgagcactgtcagggcaggggctgtgtcttgcatctttgggtgccagtc-ctaacacagc s panTro4.chr4 190283610 3112 + 193495092 ATTCATTTCCCAATCTACTTTCATTGGAATTACATATAAACATAAATAAATTCCTTAGGCCAATATTCGAAGGTTCT-ATTCATTTTCTTTTCTAAGAAATGTATTGACATAA------------------------------ATAAAACTG--CTATTTAGAAAAAGTACTTATGGATTCAATTAATTTGGCCCTATTCTTCCCAC-------------CA-----------------GTTTT-----------TTTT------CTTGACAAGGCAGCTCATTTTTGTGGTGATGTAGCAGTTCGTGTCACAAGCAAATTAAAATAAAAAATGTCCAC-TTCTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGTTATAAAAATTCATTCAATTATATTTGGCCAAATACAAGATATTAACTTGAGTTA-CATTGAGTATTTAATAGTTAGCAAAACTTATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTC-TAATAAAGTGTTCAAACACAAAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAATTGACAAGCAGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCATCACTGGTTCAAATGTTTTTTATTTCT-----------TTCTATATTCTGCACTCATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAATGCATCAGTGTGGCGAGTTGATGACAATTG-CTGAGCTGAGTGAGAGGCATGGTTTGGAAATTCTCTTTGTTCTTTGT---GGCTCTGTCCTGTGACA--CTGCCA-TTATCCTTTCGAGTGGAGGCTGGGATAATGGGCCTTAGAGAGGGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCACTTGGGCCCTTTGACATGCTCTTCTAGATATTACGATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TCAGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCCATTTTTGCCTTcctccatttttagagacatgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaacgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactctTGACATGAGCCATCCT-GCTGTGTAT-TAGTGCCAACGGCCATCAGAACCGTCTTGATTGCTGAGATGACTCCAGGACCCCAACCAACCGCCAACTT----GTGTTTCCCTAATCAGTCTACTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCTGAGCATTTTTGT-------------------------------GACTTCTGTGAGAGCTATTGAATTTGGCACTGTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACAAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGACACAGAAATTATTTCAGCGACTCAGTTTCCTAGTGGAGAAGATAACATGGACG--------TTTTAGAAAATAAAATGCATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTTGTTTGATTTATACTCAACAGTTGTTGTAAGTAAAAACTAAGCTCCATTTCCCAGGAAATTTATAGCTTAGACAAGCACCAGCGTTGTCACGGTGGTTCCCACTGCCGAATGCACTGGAAGTGATTTCTTCCTGTAT-------------GCTTTCAGAGGATCCTACTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAGTAAA--TGCCAAATAGCAACAGCTGATCTA---GGTTAAAAGATTTA---AAGAAGTTTCAAAGGCAGCCTAGGAGAAAC-AGTGAGAAATAATTCTAGAAACAAGAGAGTTCTGATAAT---CACTCAAGTGAAGAGAGCTCAGGCAGACAGAATGCTACTCCTCTCCTTTA-GGGCACTGCAAGTCAGCGCTCTGTAGACAGCATTTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACAGAT----ATATcaggattgcatagtggctgcatgcccaggggctctggagtcagactgcctggtggtttagagccagac----t------------ctatcactggatctgtgctcttggataaacgagacaaataacaggacctgtttaa-ttgggctgttgtgaggattaaagaggatgctacatgtgaaagtcctggtagagtcttgataaac------attag-cgT---GTTGAGGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAGTAGTATAACAAGGGAGCGATCGCTCCGGTGTAAGTTAAACAC---TGGGAATTATGAGCATCTCATGTTCTTGcatcttcctagaaatccgcagccatgtccaaggctttaagtgacagttgtttcttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGccactaccagcctaaccttcagctcttctcactgaactactggccctttctgcagctggaatgttcgtttcatgctcc-gtaactttgcatgtgctgttcccgccgtcattagtacccctacttcttgtccatctggcgcattgctgctcatccttcagtgctcaagcaccatgtcctctgtaaaagcctctgacttccttttgctgatttaag-----------cgttcctcccttt-------acgcgtttatggca-ctctctcgcatttccttatagctctcatgaagtgacactggaaatcgtgtgtgtgcctgtctccacactcccctgtgagcactgtcagggcaggggctgtgtcttgcatctttgggtgccagtc-ctaacacagc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195249124 3112 + 198332218 ATTCATTTCCCAATCTACTTTCATTGGAATTACATATATACATAAATAAATTCCTTAAGCCAATATTTGAAGGTTCT-ATTCATTTTCTTTTCTAAGAAATGTATTGACATAA------------------------------ATAAAACTGTGCTATTTAGGAAAAGTACTTATGGATTCAATTAATTTGGCCCTATTCTTCCCGC-------------CA-----------------GTTTT-----------TTTT----TTTTTAAGAAGGCAGCTCATTTATGTGGTGATGTAGCAGTTCGTGTCACAAGCAAATTAAAATAAAAAATGTCCAC-TTCTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGTTATAAAAATTCATTCAATTATATTTGGCCAAATACAAAATATTAACTTGAGTTA-CATTGAGTATTTAATAGTTAGCAAAACTTATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCCTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTC-TAATAAAGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAATTGACAAGCAGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCAT-ACTGGTTCAAATGTTTTTTACTTCT-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAATTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAATGCATCAGTGTGGCGAGTTGATGACAATTG-CTGAGCTGAGCGAGAGGCATGGTTTGGAAATTCTCTTTGTTCTTTGC---GGCTCTGTCCTGTGACA--CTGCCA-TTATCCTTTCGAGTGGAGGCTGGGATAATGGGCCTTAGAGAGGGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCACTTGGGCCCTTTGACATGCTCTTCTAGATATTACGATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TCAGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGACACATGTTGAGCATGACAAACTTGCCATTTTTGCCTTcctccatttttagacacgtgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagattttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacacgaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactcttgacatgacccatcCT-GCTGTGTAT-TAGTGCCAACGGTCATCAGAACCGTCTTGATTGCTGAGATGACTCCAGGACCCCAACCAACCGTCAACTTGTAAGTGTTTCCCTAATCAGTCTACTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCTGAGCATTTTTGT-------------------------------GACTTCTGTGAGAGCTATTGAATTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACAAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGGCACAGAAATTATTTCAGCGACTCAGTTTCTGAGTGGAGAAGATAACATGGACC--------TTTTAGAAAATAAAATGCATGTTAAAATAACAAATGAGGCATCTGGCTTCATAAGTTTTCGTTTGATTTATACTCAACA---GTTGTAAGTAAAAACTAACCTCCATTTCCCAGGAAATTTATAGCTCAGACAAGCA-CAGCGTTGTCATGGTGGTTCCCACTGCCGAATGCACTGGAAGTGATTTCTTCCAGTAG-------------GCTTTCAGAGGATCCTACTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGCTGATCTA---GGTTAAAAGCTTTA---AAGAAG-TCAAAAGGTAGCCTAGGAGAAAC-AGTGAGAAATAATTCTAGAAACAAGAGAATTCCGATAAA---CACTCGAGTGAAGAGATCTCAGGCAGGCAGAATGCTACTCCTCTCCTTTA-GGGTACTGCAAATCAGTGCTCTGTAGACAGCATTTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACAGAT----ATATcaggattgcatagtggctgtgtgccca-gggctctggagtcagactgcctggtggtttagagccagac----t------------ctatcactggatctgtgctcttggataaatgagacaaataataggacctgtttaa-ttgggctgttgtgaggattaaagaggatgctacatgtgaaagtcctggtagagtcttgataaac------attaG-TGT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAATAGTACAACAAGGGAGCCATCGCTCTGGTATAAGTGAAACAC---TGGGAATTATGAGCATCTCATGTTCTTTCATCGTCCTAGAAATCCGCAGCTATgtccaaggctttaagtgacagttgtttcttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGccactaccagcctaaccttcagctcttctcactgaactactggccctttctgcagctggaatgttcgtttcatgctcc-gtaactttgcatgtgctgttccttaagtgattagtgcccctacttcttgtccatctggcacattgctgctcatccttcagtgctcaagcaccatgtcctctgtaaaagcctctgacttccttttgctgatttaag-----------cgttcctcccttt-------atgcgtttat-gca-ctctctcgcatttccttatagctctcatgaagtgacactgggaatcgtgtgtgtgcctgtctccacactcccctgtgagcactgtcagggcaggggctgtgtcttgcatctttgggtgccagtc-ctaacacagc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111221168 3117 + 115148730 ATTCATTTCCCAATCTACTTTCACTGAAATTACATATAAACATAAATAAATTCCTTAAGCCAATATTCGAAGGTTCT-ATTCATTTTCTTTTCTAAGAAATGTATTGACATAA------------------------------ATAAAACTGTGCTATTTAGAAAAAGTACTTATGGATTCAATTAATTTGGCCCTATTCTTCCCAC-------------CA-----------------GTTTT-----------TTTT-------TTAAGAAGGCAGCTCATTTATGTGGTGATGTAGCAGTTCGTGTCACAAGCAAATTAAAATAAAAAATGTCCAC-TTCTAGAAATTTTTCTTTTATGGTCTGGGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGTTATAAAA----ATTCAATTATAATTGGCCAAATACAAAATATTAACTTGAGTTA-CATTGAGTATTTAATAGTTAGCAAAACTTATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTAATTTGCCCTCCAAGGTTAAATGCTTTGTTC-TAATAAAGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATCAGTGGCAAAATTGACAAGCAGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCATCACAGGTTCAAGTGTTTTTTATTTCT-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCAAA-GTTAGAAACCCATAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATAAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAGAGTCAGCTTTAAATGCGTCAGTGTGGCGAGTTGATGACAATTG-TTGAGCTGAGTGAGAGGCATGGTTTGGAAATTCTCTTTGTTCTTTGC---AGCTCTGTCCTGTGACA--CTGCCA-TTATCCTTTCGAGTGGAGGCTGGGATAATGGGCCTTAGAGAGGGTGACCTGGTAGAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCACTTGGGCCCTTTGACATGCTCTTCTAGATATTGTGATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TCGGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCCATTTTTGCCTTcctccatttttagacacatgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggcttgaatctctgaacccataagtgtttgaatggactcttgacatgacCCATCCT-GCTGTGTGT-TAGTGCCAACGGCCATCAGGACCATCTTGATTGCTGAGATGACTCCAGGACCCCAACCAACCGCCAACTTGTAAGTGTTTCCCTAATCAGTCTACTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCTGAGCATTTTTGT-------------------------------GACTTCTGTGAGAGCTATTGAATTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACAAGAGTTGAAGTTCACAGGACAAGTTAGTGTTGATTAACCAGAGAAGGCTTCTACCCACAAAGACACAGAAATTATTTCAGCGACTCAGTTTCCGAGTGGAGAAGATAACATGGACC--------TTTTAGAAAATAAAATGCATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTCGTTTGATTTACACTCAACAGTTGTTGTAAGTAAAAACTAACCTCCATTTCCCAGGAAATTTATAGCTCAGACAAGCA-CAGCGCTGTCACGGTGGTTCCCACTGCCGAATGCACTGGAAGTGATTTCTTCCAGTAG-------------GCTTTCAGAGGATCCTACTAAGTCCAAATTCTGCACCTTGCAAATTATGCAAAAATAAA--TGCCAAATAGCAACAGCTGATCTA---GGTTAAAAGCTTTA---AAGAAGTCTCAAAGGTAGCCTAGGAGAAAC-AGTGAGAAATAATCCTAGAAACAAGAGAATCCCGATAATAAACACTCAAGTGAAGAGAGCTCAAGCAGGCAGAATGCTGCTCCTCTCCTTTA-GGGCACTGCAAGTCAGCGCTCTGTAGACAGCATTTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACAGAT----GTATcaggattgcatagtggctgcgtgcccaggggctctggagtcagactgcctggtggtttagagccagac----t------------ctatcactggatatgtgctcttggataaattagacaaataataggacctgtttaa-ttgggctgttgtgaggattaaagaggatgctacatgtgaaagtcctggtagagtcttgataaac------actag-cgT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGGATATAGGACTAGGGAATAGTATAACAACGGAGCGATCGCTCTGGTGTAAGTTAAACAC---TGGGAATTATGAGCATCTCATGTTCTTtcgtcctcctagaaatccacagccatatccaaggctttaagtgacagttgtttcttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGccactaccaccctaaccttcagctcttctcactgaactattggccctttctgcagctggcatgttcttttcatgctcc-gtgactttgcatgtgatgttccctccgtgatcagtgcccctacttcttgtccatctggcacattgctgctcatccttcagtgctcaagcaccatgtcgtctgtaaaagcctctgacttccttttgctgatttaag-----------cattcgtcccttt-------acgtgtttatggca-ctctcttgcatttccttatagctctcatgaggtgacactgggaatcgtgtgtgtgcctgtctccacactcccctgtgagcactgtcagggcaggggctgtatcttgcatctttgggtgccagtc-ctaacacagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181024201 3127 + 184069350 ATTCATTTT-----CTACTTCCATTGGAATTACATAGAAACATAAATAAATTCCTTAAGCCAATATTCAAAGGTTCT-GTTCATTTTCTTTTCTAAGAAATGTATTGACATA-------------------------------AAAAAACTGTACTATTTAGAAAAAGTACTTATGGATTCAATTAATTTGGACCTATTCTTCCTATTCCTCCCCCCCCAAAAAAAAAAAGTTTTTTTTGTTTT-----------TTTTG---TTTTTAGGAAGGCAGCTCATTTATGTGGCAATGTAGCAGTTCATGTCCTAAGCAAATTAAAATAAAAAATGTCCAC-TTTTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGCTATAAAAATTCATACAATTATATTTGGCCAAATACAAAAGATCAACTTGAGTTA-CATTGAGTATCTAATAGTTAGCAAAAC--ATATCCATTGATATTGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTCTTAATAAGGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAACTGACAAGCCGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCGTCCCTGGTTCAAATGATTATTATTTCT-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAAAGAATCAGTGTGGTGAGTTGATGACAATTGCCTGAGCTGAGTGAGAGGCATAGTTTGGGAATTCTCTTTGTTCTTTGC---GGCTCTGTCCTGCGACA--CTGCCA-TTATCCTTTCAAGGGGAGGCTGGGATAATGGGCCTTAGAGAGAGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCAGCTGGGTCCTTTGACATGCTCTTCTA--------GATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TTGGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCCATTTTTGCCTTcctccatttttagacacatgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactcttgacatgacCCATCCC-GCCGTGTAT-TAATGACAACGGCCATCAGAACCGTCCTGATTGCTGAGATGGCTCCAGGACTCCAACCAACTGCCAACTT----GTATTTCCCTAATCAGTCTGCTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCCGAGCATTCTTGT-------------------------------GACTTCTGTGAGAGCTATTGAAGTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACCAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGACACAGAGATTATTTCAGCGACTTGGTTTCCGAGTGGAGAAGATAACATAGACC--------TTTTAGAAAATAAAATGTATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTCATTTGATTTATACTCAACAGTTGTT-TAAGTATAAACTAACCTCCATTTCCCAGGAAATTTATAGCTCAGACAAGCA-CAGTGCTGTCACGGTGGTTCCCACTGCCGAATGCATTGGCAGTGATTTCTCCTAGTAG-------------GCTTTCAGAGGATCCTTCTAAGTCCTAATTCTACACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGCTGATCTG---GGTTAAAAGCTTTA---AAGAAGTCTCAAAGGTAGCCTAGAAGAAAG-AATGAGAAGTAATTCTAGAAACAAGAGAGTTCCAGTAATAAACACTCACGTGAAGAGAGCTCAGGCAGGCAGAAGGCTACGCCTCTTCTTTA-GGGCACTGTAACTCAGTG--CTGTAGACAGCATCTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTATAGGCCACCCCTCTACAGAT----ATATcaggatagcatagtggctgcatgcccaggggctctggagtcagactgcctggtggtttagagccagac----t------------gtatcactggatctgtgctcctggatacatgagacaaataatagtacctgtgtaa-ttgggccgttgtgagaattaaagaggatgctacgtgtgaaagtcctggtagagtcttgataaac------aTCAGCCGT---GATGAAGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAATAGTATAACAAAGGAGCGATCGCCCCGGTGTATGTTAAACA--------AATTATGAGCATCTCATGTTCTTtcatcttcctagaaatccacagtcatgtccaaggctttaagtgacagttgttccttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGCCActaccagcctaaccttcagctcttctcacagcactattggccctttctgcagctggaatgctcttttcatgctcc--taactttgcatgtgatattccctccatcattactgtccctacttcttgtccatctggcacattgctgctcatcctgcagtgctcaagcaccatgtcctctgtaaaagcctctgacttccttttgctgatttaag-----------cattcctcccttt-------atgcttttatggca-ctctctcgcatttccttatagccctcatcaagtgacactgggaatcacatgtgtgcctgtctccacgctcccctgtgagcaccgtgagggcaggggctgcggcttgcatctttgggtaccagtc-ctaacgcagc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186361353 3155 + 189454096 ATTCATTTT-----CTACTTCCATTGGAATTACATAGAAACATAAATAAATTCCTTAAGCCAATATTCAAAGGTTCT-GTTCATTTTCTTTTCTAAGAAATGTATTGACATAAAAAAACTGTACTATTTAGAAAAAGTAC-TTAAAAAACTGTACTATTTAGAAAAAGTACTTATGGATTCAATTAATTTGGACCTATTCTTCCTATTCCTCCCCCCC--AAAAAAAAAAGttttttttgtttt-----------ttttg---tttttAGGAAGGCAGCTCATTTATGTGGCAATGTAGCAGTTCATGTCCTAAGCAAATTAAAATAAAAAATGTCCAC-TTTTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGCTATAAAAATTCATACAATTATATTTGGCCAAATACAAAAGATCAACTTGAGTTA-CATTGAGTATCTAATAGTTAGCAAAAC--ATATCCATTGATATTGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTCTTAATAAGGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAACTGACAAGCCGTA-ATTCTTGACCAGAGTTTGTATTTGT-TCGTCCCTGGTTCAAATGATTATTATTTCT-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAAAGAATCAGTGTGGTGAGTTGATGACAATTGCCTGAGCTGAGTGAGAGGCATAGTTTGGGAATTCTCTTTGTTCTTTGC---GGCTCTGTCCTGCGACA--CTGCCA-TTATCCTTTCAAGGGGAGGCTGGGATAATGGGCCTTAGAGAGAGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCAGCTGGGTCCTTTGACATGCTCTTCTA--------GATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TTGGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCcatttttgccttcctccatttttagacacatgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactcttgacatgacCCATCCC-GCCGTGTAT-TAATGACAACGGCCATCAGAACCGTCCTGATTGCTGAGATGACTCCAGGACTCCAACCAACTGCCAACTT----GTATTTCCCTAATCAGTCTGCTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCCGAGCATTCTTGT-------------------------------GACTTCTGTGAGAGCTATTGAAGTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACCAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGACACAGAGATTATTTCAGCGACTTGGTTTCCGAGTGGAGAAGATAACATAGACC--------TTTTAGAAAATAAAATGTATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTCATTTGATTTATACTCAACAGTTGTT-TAAGTATAAACTAACCTCCATTTCCCAGGAAATTTATAGCTCAGACAAGCA-CAGTGCTGTCACGGTGGTTCCCACTGCCGAATGCATTGGCAGTGATTTCTCCTAGTAG-------------GCTTTCAGAGGATCCTTCTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGCTGATCTG---GGTTAAAAGCTTTA---AAGAAGTCTCAAAGGTAGCCTAGAAGAAAG-AATGAGAAGTAATTCTAGAAACAAGAGAGTTCCAGTAATAAACACTCACGTGAAGAGAGCTCAGGCAGGCAGAAGGCTACTCCTCTTCTTTA-GGGCACTGCAACTCAGTG--CTGTAGACAGCATCTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACAGAT----ATATcaggatagcatagtggctgcatgcccaggggctctggagtcagactgcctggtggtttagagccagac----t------------gtatcactGGATCTGTGCTCCTGGATACatgagacaaataatagtacctgtgtaa-ttgggctgttgtgagaattaaagaggatgctacgtgtgaaagtcctggtagagtcttgataaac------aTCAGCCGT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAATAGTATAACAAAGGAGCGATCGCCCCGGTGTATGTTAAACA--------AATTATGAGCATCTCATGTTCTTtcatcttcctagaaatccacagtcatgtccaaggctttaagtgacagttgttccttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGCCActaccagcctaaccttcagctcttctcacagcactattggccctttctgcagctggaatgctcttttcatgctcc--taactttgcatgtgatattccctccatcattactgtccctacttcttgtccatctggcacattgctgctcatcctgcagtgctcaagcaccatgtcctctgtaaaagcctctgacttccttttgctgatttaag-----------cattcctcccttt-------atgcttttatggca-ctctctcgcatttccttatagccctcatcaagtgacactgggaatcacatgtgtgcctgtctccacgctcccctgtgagcaccgtgagggcaggggctgcggcttgcatctttgggtaccagtc-ctaacgcagc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175976656 3147 + 178775436 attcatttt--------ctttcattggaattacatagaaacataaataaattccTTAAGCCAATATTCAAAGgttct-attcattttcttttctaagaaatGTATTGACATaaaaaaactgtactatttagaaaaagtac-ttaaaaaactgtactatttagaaaaagtactTATGGATTCAATTAATTTGGACCTATTCTTCCTATtcctccccccc--caaaaaaaaagttttttttgtttt-----------ttttg---tttttaggaagGCAGCTCATTTATGTGGCAATGTAGCAGTTCATGtcctaagcaaattaaaataaaaaatgtccac-ttttagaaatttttcttttatggtctGAGTCAGCCATAACCACAGAGGATCCATCTTGTGCAATACTGCTATAAAAATTCATACAATTATATTTGGccaaatacaaaagatcaacttGAGTTA-CATTGAGTATCTAATAGTTAGCAAAAC--ATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTCTTAATAAGGTGTTCAAACACAGAATAAATCAGGTATTAGCT--------GTCAGTTAAATTAGTGGCAAAACTGACAAGCCGTA-ATTCTTGACCAGA----GTATTTGT-Tcgtccctggttcaaatgatgattatttct-----------ttctatattctgCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCataattagtttatttattttcaaaggtTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAAAGAATCAGTGTGGTGAGTTGATGACAATTGCCTGAGCTGAGTGAGAGGCATGGTTTGGgaattctctttgttctttgc---GGCTCTGTCCTGCGACA--CTGCCA-TTATCCTTTCAAGGGGAGGCTGGGATAATGGGCCTTAGAGAGAGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCAGCTGAGTCCTTTGACATGCTCTTCTA--------GATGTTGGTGTTATATTGGAATGGAAGGATTTGATTAC-TTGGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCCATTTTTGCCTTCCTCCATTTTTAGACACATGACTCTATTAAGGGAAATTTAATCCGTATGTTTCTGATTCCTTTACACTTAACTCATCAAAATGTTGTTTTGTAAGAACACTTTGAAGTCAGGGAAGccttttaagtcattttttatgAGACTTTTTCAAGCCTCTTTTCTTAGGAACAGGAAGTGGCATTTAGCCAACAGTTAACAAACTCAAACACCAAAAGGTTGAAGTTGGGTTTGAATCTCTGAACCCATAAGTGTTTGAATGGACTCTTGACATGACCCATCCC-GCCGTGTAT-TAATGCCAACGGCCATCAGAACCGTCCTGATTGCTGAGATGACTCCAGGACTCCAACCAACTGCCAACTT----GTATTTCCCTAATCAGTCTGCTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGCCGAGCATTCTTGT-------------------------------GACTTCTGTGAGAGCTATTGAAGTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACCAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGACACAGAGATTATTTCAGCGACTTGGTTTCCGAGTGGAGAAGATAAC--Agacc--------ttttagaaaataaaatgtatgttaaaataacaaatgagGCATCTGGCTTCAGAAGTTTTCATTTGATTTATACTCAACAGTTGTT-TAAGTATAAActaacctccatttcccaggaaATTTATAGCTCAGACAAGCA-CAGTGCTGTCATGGTGGTTCCCACTGCCGAATGCATTGGCAGTGATTTCTCCTAGTAG-------------GCTTTCAGAGGATCCTTCTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGCGGATCTG---GGTTAAAAGCTTTA---AAGAAGTCTCAAAGGTAGCCTAGAAGAAAC-AGTGAGAAGTAATTCTAGAAACAAGAGAGTTCCAGTAATAAACACTCATGTGAAGAGAGCTCAGGCTGGCAGAAGGCTACTCCTCTTCTTTA-GGGCACTGCAACTCAGCG--CTATAGACAGCATCTATTATCTAGGTGAAAAAGCCTGGGGACGTGGTACAGGCCACCCCTCTACATTT----CTATCAGGATAGCGTAGTGGCTGCATGCCCaggggctctggagtcagactgcctggtgGTTTAGAGCCAGAC----T------------CTATCACTGGATCTGTGCTCCTGGATACATGGACGAAATAATAGTACCTGTGTAATttgggctgttgtgaggattaaagaggATGCTACGTGTGAAAGTCCTGGTAGAGTCTTGATAAAC------ATTAGCCGT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAATAGTATAACAAGGGAGTGATCGCCCCGGTGTACGTTAAACA--------AATTATGAGCATCTCATGTTTTTTCATCTTCCTAGAAATCCACAGTCATGTCCAAGGCTTTAAGTGACAGTTGTTCCTTTATGACTCTCAAATCAATGTCCTTCCTCTAGATCTCTCTCTGAGCAAGGCCTACAAGGCCACTGCCAGCCTAACCTTCAACTCTTCTCACTGAACTATTGGCCCTTTCTGCAGCTGGAATGCTCTTTTCATGCTCC--TAACTTTGCATGTGATGTTCCCTCCATCATTGGTGTCCCTACTTCTTGTCCATCTGGCACGTTGCTGCTCATCCTGCAGTGCTCAAGCACCATGTCCTCTGTAAAAGCCTCTGACTTCCTTTTGCTGATTTAAG-----------CATTCCTCCCTTT-------ATGCTTTTATGGCA-CTCTCTCGCATTTCCTTATAGCCCTCATCAAGTGACACTGGGAATCATGTGTGTGCCTGTCTCCACGCTCCCCTGTGAGCACCGTGAGGGCAGGGGCTGCGGCTTGCATCTTCGGGTACCAGTC-CTAACACAGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132819453 3164 + 135778131 ATTCATTTCCCTATCTACTTTCATTGGAATTACATATAAACATAAATAAATTCCTTAAGCCAATATTCAAAGGTTCT-ATTCATTTTCTTTTCTAAGAAATGTATTGACATA-AAAAACTGTACTATTTAGAAAAAGTACTTTAAAAAACTGTACTATTTAGAAAAAGTACTTATGGATTCAATTAATTCGGACCTATTCTTCCTATTCCTCCCCC----CAAAAAGAAgtttttttttgttttgttttgttttgttttgttttttttAGGAAGACAGCTCATTTATGTGGCAATGTAGCAGTTCATGTCGTAAGCAAATTAAAATAAAAAATGTCCAC-TTTTAGAAATTTTTCTTTTATGGTCTGAGTCAGCCATAACCACAGAGGATCCGTCTTGTGCAATACTGCTATAAAAATTCATACAATTATATTTGGCCAAATACAAAAGATCAACTTGAGTTA-CATTGAGTATCTAATAGTTAGCAAAAC--ATATCCATTGATATCGAATGC-TCT-CTGCCAAACATGTATGGTCTTGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTCTTAATAAGGTATTCAAACACAGAATAAATCAGGTATTAGCT--------GTCATTTAAATTAGTGGCAAAACTGACAAGCCATA-ATTCTTGACCAGAGTTTGTATTTGT-TCGTCCCTGGTTCAAATGATTATTATTTCC-----------TTCTATATTCTGCACTTATATTCTTG---CCCAAAGACATTTTCCTCT-CTTGGAAAATCATAATTAGTTTATTTATTTTCGAAGGTTAGAAACCCACAGAATCA-----TGATTAATGATGTGGAAATTAAATACAT-A---CAGGTACTGTTGCCTTTTGCAAGACACTTCATGGTTAATGAGTGCTGGTTTGTATTCTCTTCATTCAGACAGTAAAGTCAGCTTTAAATGCATCAGT-TGGTGAGTTGATGACAATTGCCTGAGCTGAGTGAGAGGCATGGTTTGGAAATTCTCTTTGTTCTTT------GCTCTGTCCTGCAACA--CTGCCA-TTATCCTTTCAAGGGGAGGCTGGGATAATGGGCCTTAGAGAGAGTGACCTGGTATAGCTTGACCTGCACAAATGTGTTTGTCTTTATTCAGCTGGGTCCTTTGACGTGCTCTTCTA--------GATGTTGGTGTTATATTGGAATGGAAGCATTTGATTAC-TTGGGG--ATCAATAGCTACTCTGGAC-ATTTTTTGAAACATGTTGAGCATGACAAACTTGCcatttttgccttcctccatttttagacacatgactctattaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaacactttgaagtcagggaagccttttaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttgaagttgggtttgaatctctgaacccataagtgtttgaatggactcttgacatgacCCATCCC-GCCGTGTAT-TAGTGCCAACGGCCATCAGAATCGTCCTGATTGCTGAGATGACTCCAGGACTCCAACCAACTGCCAACTC----GTATTTCCCTAATCAGTCTACTTCATGCTGAATTATGACTCATTTAACTTTAAAGGAACTACTTTATTACCCAT----TCTGGCGAGCATTCTTGT-------------------------------GACTTCTGTGAGAGCTATTGAAGTTGGCACTCTCCCACAGCTAGCTAGATATAACTTT-TGAATCCAGTCACCAGTAAAATCACACCAGAGTTCAAGTTCACAGGGCAAGTTAGTGTTGATTGACCAT-GAAGGCTTCTACCCACAAAGACACAGAGATTATTTCAGCTACTTGGTTTCCGAGTGGAGAAGATAACATAGACC--------TTTTAGAAAATAAAATGTATGTTAAAATAACAAATGAGGCATCTGGCTTCAGAAGTTTTCATTTGATTTATACTCAACAGTTGTT-TAAGTATAAACTAACCTCCATTTCCCAGGAAATTTATAGCTCAGACAAGCA-CAGTGCTGTCATGGTGGTTCCCACTGCTGAATGCATTGGCAGTGATTTCTCCTAGTAG-------------GCTTTCAGAGGATCCTTCTAAGTCCTAATTCTGCACCTTGCAAATTATGCAACAATAAA--TGCCAAATAGCAACAGGTGATCTG---GGTTAAAAGCTTTA---AAGAAGTCTCAAAGGTAGCCTAGAAGAAAC-----AGAAGTAATTCTAGAAACAAGAGAGTTCCAGTAATAAACACTCATGTGAAGAGAGCTCAGGCAGGCAGAAGGCTACTCCTCTTCTTTA-GGGCACTGCAACTCAGTG--CTGTAGACAGCATTTATTATTTAGGTGAAAAAGCCTGGGAACATGGTACAGGCCACCCCTCTACATTT----ATTTcaggagagcatagtggctgcatgcccaggggctctggagtcagactgcctggtggtttagagccagac----c------------ctatcactGGATCTGTGCTCCTGGATACatgagacaaataatagtacctgtgtaa-ttgggctgttgtgaggattaaagaggatgctacgtgtgaaagtcctggtagagtcttgataaac------attagccgT---GATGAGGATGTGG---------------------------------------------------------------------------------------TTGG--ATAGGACTAGGGAATAGTATAACAAGGGAGCGATCGCCCCGGTGTACGTTAAACA--------AATTATGAGCATCTCATGTTCTTtcatcttcctagaaatccacagtcatgtccaaggctttaagtgacagttgttccttgatgactctcaaatcaatgtccttcctctagatctctctctgagcAAGGCCTACAAGGCCACTACCAGCCTAACcttcagctcttctcactgaactattggccctttctgcagctggaatgctcttttcatgctcc--taactttgcatgtgatgttccctccatcattagtgtccctacttcttgtccatctggcacattgctgctcatcctgcagtgctcaagcaccgtgtcctctgtaaaagcctctgacttccttttgctgatttaag-----------cattcctcccttt-------atacttttatggca-ctctctcgcatttccttatagccctcatcaagtgacactgggaatcacgtgtgtgcctgtctccacgctcccctgtgagcgccgtgagggcaggggctgcggcttgcatctttgggtaccagtc-ctaatgcagc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188201202 3049 - 190850796 attCATTTCCCAAACTACTTTCATTGGAATTACATATAAACATAAATACATTCCTTAAGCCAGTATTTGAAGATTCT-GTTCATTTTCTTTTCTAAGAAATATATTGATATAA------------------------------ATAGAACTGTACTATTGATTAGAAGTACTCATGGATTCAATTAATTTGGACCTATTCTTCCCAC-------------TA-----------------ATTTT-----------TTTT------TTTAAGAAGGCAGCTC--TTATGTGCTGAGGTAGCAGTTCATGTAACAAGCGAATTAAAAT-AAAAATGTCCGC-TTTTAGAAATTCTTCCTCTATGGGCTGAGTTAGCCATAACTCCAGAGGAGCCCTCCTGTGCAATACTGCTGTAAACATTCGTACCGTTAGATGTGACCAGATACAGAAGATTAACTTGAGTTA-CATTGAGTATCTAATAGTTAGCAAAACCTATATCCATCGATATTGAATGCTTCT-CTGCCAAACATGTATGGTCTCGTTTTCATTTGCCCTCCAAGGTTAAATGCTTTGTTCTTACTAAGGTGTTCAAACACAGAATAAATCAGGTGTCAGCT--------GTCAGTTAAATTAGTGGCAAAACTGACAAGCTCTA-ATTCTTGACCAGAGTTTGTATTTGCACCACACCTGGTTCAAATGATTTTTGTTTCT-----------TTCTGTATTCCGCACTTATTTTCTTG---CCTGAA---ATTTTCCTCT-CTTGGAAAATCATGATTAGTTTATTTATTTTCAAAGGTTAGAAACCCACAGAATCA-----TGATTAGTGATGTGGAAATTAAATACAT-A---CAGATACCATTGCCTTTTGCAAGACACTTCATGGCTAAGGGGTGCTGGTTTGTATCCTCTTCATTCGGATAGTAGAGTCAGCTTTAAATGTGTTGGTGTGGCAAGTTGATGAGCATTTCCTGACTGGAGTGAGCGGCATGGTTTGGAAATTA----TGTTCTTTGC---AGCTCCATCCTGTGAGG--CTGCGA-TTATCCTTTCAAGTGGAGGCTGGGATGATGGGCCTTAGAGAGGGTGACTGGGTACAGCTTGACCTGCACAAAGGTGTGTGTCTTTATTCAGCTGGG-CCTTTGACATGCTCTTCTGGATAGTACTATGTTGGTGTTATATTGGAATGGGAGGATTTGATTAC-TCGGGG--ATCAGTAGCCACACTGGAC-ATTTTTTGAAACACGTTGAGCATGACAAACTTGCcatttttgtcttcctccatttttagacacatgactctattaa-ggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgtttcgtaagaactctttgaagtcagggaagccttctaagtcattttttatgagactttttcaagcctcttttcttaggaacaggaagtggcatttagccaacagttaacaaattcaaacaccaaaaggttgaagttgggtttgaatctatgaacccgtaagtgtttgaatggactcttgacatgacCCGTCCCTGCTGTATGT-TAGTGCCAAGGGCCATCGGAATCATCCTGATTGCCAGGATAACTCCAGGACGCCAACCAACCGCCAGCTCGTAAGCGCTTTCCTAATCAGTGTACTTCATGATGAATTATGACTCATTTAACTTTGAAGGAACTGCTTTATTACCCCT----TCTCCCGAGCACTTTTGT-------------------------------GACTTCTGTGAGAGCTATTTAACTTGGCACTCTCCCGCAGCTAGCTAGATGTGACTTT-TAAATCCAGGCACCAGTAAAATCACGCAAGAGCTCAAGTTCACAGGACAAGTGAGTGTTGATTGGCCAT-GAAAGCTTCTGCCCACAAAGACACAGAGATTATTTCAGCCACTCAGTTTCCGACTGGAGAAGATAACGTGGATC--------TTTTAGAAAATAAAATGCACCTTAAAATAACAAATGAAGCATCTGGCTTCAGAAGTTTT-ATTTGATTTATACTCAACAGTGGTTGTAAGCATAAATGAACCTCCATTTCCCAGGAAATTTATAGCCCAAACCAGCA-CGGTGCTGCCATGGTGGTTCCCGCTGCCAGATGCATTGGAAGTGATTTTGTCCAGGAG-------------GCTTTCAGGGTATTCTACTAAGTCCTGATTCTGCACCTTGCAAGTTATTC-GCAATACA--TGCCAAATAGCAACAGCTGATCTA---GGTTAAAAGCTTTG---AAGAAGTCTCAAAGGTAGCCTAGAAGGAAC-AGGGAGAAGTAATTCTGAAAAC---AGAGTTCTGGTAATAAACACTCATGTGAAGAGCGTTCA----GACAGCGTGCTACTCCTCCTCTTGA-GGGCACTGCAACTCAGCACTCTGTAGACAGCGTTTTTTATCCAGGTG-AGAAGCCTGGGGACCCGGTGCAGGCCACCCCTCTGTGGAT----ATATcaggatagcatagtggctgcatgcccagggactctggagccagact--------------------------C------------TTACCAGTGGATCTGTGATCTTGG-TAAATGAGACAAAT---AGGACGTGTTTAA-TTGGGCTGTTGTGAGGATTAACGAGGATGCTACATGTGAAAGTCCTGGTAGAGTCTTTATAAAC------ATTAGCCTT---GATGAGGATGTGG----------------------------------------------------------------------------------------TGG--ATAGGACTGGGGAATAGTACAACAGGGAAGCGATCACTCCGGTGTAAGGTAAACAC---TGGGAATTATGAGCATCTCCTGTTCTTTCATCGTCCTAGCAATCCCCAGCCACGTCCAAGGCTTTAAGGGACACTTGTTTATTGGTGACTCTCAAATCAGTGTCCTTCCGTTAGATCTCTCTCTGAGCAGGGCCTACAAGGCCACGACCAGCCCAGCCTTCAGCTCTTCTCACTGAACGGTTGGCCCTTTCTGCAGTTCGAATGTTCCTTTCATACTCT-GTAACTCTG-GTAtgatgtcccctccatcaggagtg-ccctgcttcttgtccgtctggcacatttctgctcatccttcagtgctcaggca-catgtcctctgtcgaagcttctgacttccttttgctgattcaag-----------ggttcctcccttg-------ctggttttctggca------------------------ctcaccaagtcacactgggaatcgagtgtgtgcctgtctccacactccc--gtgagcaccgcgagggcaggggctgcgtcttacatcttcgggtgccagtc-ctaacacagc i calJac3.chr3 C 0 C 0 s mm10.chr8 84690379 3118 - 129401213 aTTCATTTATCATTATAACTTCATTGGAATTATATCTA-----AAATA-------TTAGCCAATGATTGAAAATTTTAATTGGCTTTGTTTTCTAAGAAATATATTCATGTAA------------------------------ATAAAACTGTACAATTTAGGAAAGGTACTTAGGACTTCAACCACTTAGAACTTTTCCTTT-----------------CA-----------------GTGAC-----------GTTT-------TTAAGGAGGCAGCTCACCTGTATGTTTCTCTAGCATTTCTTGTCACAAGAAAATTGTCAGAAGAAATGCCTGC-ATTGAGAAATTTTTCTGTTATTGTCTGA-----CCCTAACCCCAG-GGATTTATTGTATGAAATACTGCTATAAAAATCCATGCCATTCTATTTGGCTGTACACAAAACATTAAATTGGGTTATCATTGAGTGTTTAATAGTTAACAAAACTTATATTCATTAATAGCTAATGC-TTTGCTTTGAAACATGTATGGTCTTGTTTCCACTTTGCCT-CAAGGCTAACTTCTTTGTTCTTTATAAGACA-TCAGACACAGAATAAATCAGCCATGAGCTAGCTGTTCATCAGTTAAATTAGTGGCAAGGCAGAGAAA-AGGG-ACTTTTGGCTAGGATTTGCAGTTGT-TCAGAAAAG---CAAATAACTTCTGCTTATTTTCTTTATTGTTTTGTATTATACAACTATATTCTTGTCTCCCAAATGTTTTTTCTCAC-TATGGGACATATTCATTTATTTGTTTATTTTCACATTTTAAAAATCCACAAATTTAACTTTTAAAGGATGATATGGAAATTAAATATATGG---AAGATAACCCTGCCTTTTATGTGA-AGTTCATTGCCAGTGGAAACTTGTCTGTATTCCCTCCATTCAGACC-TGAAGTAAGCCTTAAATATATCAATGTGGCAAGCTGGTGAC-ATTATCCCAATGTAGTGA-AGGTCCAGTTTAGAAATTCACTTTGTTCTTTATTTAAGCTGTGTTCTATGACA--CTCTGAGCTTTCATTTAAAGTAGAGGCTAATATTGCCTCCCACAAAGAGGATGACCTGCTATAACCTGACCTACAT-AATATATTTGTCTTTATTCTGTTAGGCCCTTTGACATATCCTGGTA--------GATGCCAGCATTTCATTGAAATGGACAACTTTGATTGCTTTAGGA--ATCAATAATTATTCTAAGTGATATTTTGGAGCTTGTTGAGCAACACCAACTTGCC-TTCGtctctctctccgtttttagacacatgactctattaagggaaatttgatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagaccgctttgaagtcagggaagccttttaagtcattttttatgagactttttcaagccttttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttcaacttgggtttggatctccgcaatgacgagtgtttgaatggactcctgacatgacCCATCTTTGCTGACTAT-GACTGCCAATAGCCATCATAACAGTCCTAATTACCCAGACAACTCAAGGGTCCTAACCAACTGCCAACTCTCAAGTGTTTCTCCAATCAATCTTCTTCATGCTACATTATGACTCATTTAACTTTAAAGAGACTACTTTATTACCCATTCAGTCTAGCTAGCATTTGTATGTGTGAGAGAGAGAGGGGGCTGGGAGAGGGAGACTTCTGTGAGAGCTATTTAAATCTTCACTCTCACGAAGCTGGCTGGTTAGAACTTTAAAAACCCAGTCGCTAATAAAATCACAC-AGAGTTCAAGTTCACAGAACAAGTGAATTCTGATTGATCAT-GAAGGCTTCCAGCCAC----------AGACTACTCCTGACACTCAGCTCTC-AGCGCAGGCGATAACACAGATCCTGCAATGCTTTCGAGAAGAAAATGTACATTAAAATAAAGAATGAAGCATCTGGCTTCAGAAGTACTTATTTGATTTATACCCAACAGTTGTTGTACACATAAACCAGCCTCCATTTCCCAGGAAATTTATAGCCCAAACAA-----------GTCGTGGTGGTGCTCACTGCCTAATGCATTCAAAGTGATTTGGTCCAGTAGTGGGGGGAGAAATTCTTTGAAATTCTCCTGCTAAATCTTCATTCAATGACCTCCAAGTTAGGCAACAATGAATGTGCCAAAGAGTAGCAGCCGATCTA---GGTTAAAAGCTTTAACTAAGTAGTTTTAAAGGAAGCCCAGAAAAAGGGAATAAGAAATAGTTCTAGAAACAAGACTGT--CAGTGAGGACCAGTGACGTTCAGTGCCCTTGGG-AGACAGGA--------------------GGCAGGGTGACTCTGAACTCAATATTCAATATTTACAGCTTAGACCAGGGAGCCTGGCGATGGGGCAACAG--ATCTTTGTGGAGGTAAAGAAACCAGGATAGCATA-----TGAAGGCCCAGGCATTTGGGTGACAGATCAC---ACTGTTCAAAGACCGAC----TCAGTCTGTCTGACTATTGATGGATCTATGACTTTGAGaaagtggcgctaatgatagaatccatgcca-ctagactgtcgtgaagcttgaaggagatgctacgtgtcaagtccctacttaggccttgataaac------atcagctgtcaagatgatggtgacG---------------------------------------------------------------------------------------TTGG--ATAGAACTC---AGTTATGTTACCAGGAAATGGTCATTCAGATATGAGTCAACTCCAGAAGGGAGTT----GGACCTTGTGTTCTTCAGTCCTCCTAGGATTtctcatccagttccatgacttgaagtaacacttgtttattgttgactcacagataaatgtccttttccttagcttctcccAGAAGCAGGTCTG-AAAGCCACAGTGGCCC--ATCTTTAGTTTTTCTTGCTG---TGTTGCTTTCTTCTCACCTTCAAGTTTTTCTCTCCTGTGCTAGCAACGTTGCATTTGGTGTTCTACCTGTCAATCATCGCTTTTCTCTTTGTTCACTTGGTGAAAT-CTTCTTGGCCTT-----CTCATGCA----GATCTCTAGCCAGCCTTCTAAC-TCCCGCTGCTCATAAAGG-----------TGCATCTCCTCTT-------AAGACTTCAT------TTTCTC---TTTCTTTGCAGTCCTCATCTGGCCACACTGGAAAGCTATTGAGTATTTGTTGCCCTCTCCATTTGAGGGAACGGAAAGGG-ACAGACTGTATTTTATGTCCTCGGATGCCAGCCTCTCACAAGGC i mm10.chr8 I 526 C 0 s canFam3.chr16 15694907 3176 - 59632846 ATATATTTACCAGTCTATATTCGTTGGAATTCTATATAAACATCACTGGACTCCTTAAGTCAATATGTGAAGGTTTT-ATTTATTTCCTTTTCTAAGAAATATATTGACATAA------------------------------ATAAAACTATGCTGTTTAAGAAAGGTACTTATGGATTTAATTAATTAGGACCTTTTTCTCACAC-------------TA-----------------ATTTT-----------GTTT--------TAGGAAGGCAGCTCATTTATATGTTACTG--GCAGTTCATGTCACAAGCAAATTAAAAT---AAATGTCTACTTTTTAGAAATTTTTCTTTTATGGTCTGAAACTGCCATAACCACA--------ATTTACTGAAATATTACTATAAAA-TTCATACTATTGC------------------------CTTGGGTTA-TATTGAGTATCTAATAGTTAGCAAAACTTATATCCATTAGTATCTAATGCTTCA-CTGTTAAACGTATATGG------CTTTATTTGGCCTCAAAAGTTAAATACTTTGCTC-TA--AGATTTTTCACACACAGCATAAATCAGATATTAGCT----TTTTGTTGGTTAAATTAGTGGCAA-ATGGATGAGATTTACATTCCGGTCAAGAATTTGCAGTTGT-TCATCACTTGTTCAAATGATT----TTTCT-----------TTCTATGTTTTGCAATTATCTTCTTG---CCCAAAGACATTTTTCTCCACTTGGGAAATAATCATTAGTTTATTTATTTTCAAGGGTTAGAAATCCACAAAATTA-----TGATTAAAGATGTGGAAATTAAATACAC-ATACCAGGTAACACTGCCTTTTGTGTGACACTTCATGGCAAAGGAGT----GTTTGTATGCTTTTTGTTCAGACAGTCACGTCAGAGGT-AATGCATCAGTGTGGTGAGTTGATGACAATTGCCTGACCTGAGTGAGTGGTCAAGTTTAGAAATTC--TTTGTTCTTTGT---GGCTCTGTCCTGTGACACTCTGCTA-TT-TCCTTTAAAGTGGAGGCTGGCATAATGGACTGTAGAGAGGATGACCTAGTATAACCCGACCTACACAAATGCATTGGCCTTTATTCAGTTGGCCCCTTTGACATGTCCCTCTAGATGTTAGAATATTAGTATTGTTTTGGCATGGAGGAATTTGATTAC-TTTAGGTAATCAATAGCTACTCTAGAC-G--TTTTGAAACATGTTGAGCTAGATAAACTTGCTACTttttcctccctccattttaagacacatgactct-ttaagggaaatttaatccgtatgtttctgattcctttacacttaactcatcaaaatgttgttttgtaagagc-ctttgaagtcaaggaagccttttaagtcattttttatgagactttttcaagcttcttttcttaggaacaggaagtggcatttagccaacagttaacaaactcaaacaccaaaaggttcaacttgggtttgaatccctgaacccacaagtgtttggatggactcGAGACATGACCCATCTCTGCTGTATATGTAGTGCCAACAGACATCATAGCAGTTCTAATTACCGAGATGACTCTAGGATCCTAACTGCCTGCCAACTTGCAAGTGTTTCTCTAATCAATCTACTTCATGCTAAATTATGACTCATTTAACTTTAAAGGAACCACTTTATTACCCAA----TCGGCCCAGCATTTTCGT-------------------------------GACTTCTGTGAGAGCTATTTAAATTGTCATTCTCACAAAGCGAGCTAGCTAGAACTTT-AAAATCTGGTCACCAGTAAAATCACACAAGAGTTCAAGTTCACAGGACAAGTGAGTGTTGATTGACCAT-GAAGGCTTATACCC-----GGCACAGAGATTATTCCAGCCACTCAGTTTCTGAGTGAAGAAGATAACATGGATGCTGCAATCCTTCAGAAAATACAATGTACATTAAAATAACAAATGAAGCATCTGGCTTCAGAAGTTCTCACTTGATTTATACTCAACAGTTGTAGTAAGTATAAACTAGCCTCCATTTCTCAGGAAATTTATAGCCTAAACAAGCA-CACTACTGCCTTGGTAGTTCCCACTACCGAGTGCATTTGATGCGATTCTGTCCAGTAG-------------GCTTTGAAATCACCCTGCTAAGTACTCATTCTGCAACTTGCAAATTATGCAGCAATGAACATGCCAAATAGCAACAGCTGATCTACGTGGTTAAAAGCTTTA---AA------------GTAGCCCAGAAAGGGGTAGTGAGAATTAATTCTAGAAACAAATGACTTTCAGTAATTTACATTAATGTGAAGAGAGCCCA----AGCCGAATGCTATGCCTCCTTTTTAGGGGCAATGTGACTCAGTGCTCTTGAGACTGTGTTTATTATCCAGGCTAAGGAGCCTGG-GATATGGTCCAGACTACCTTCGTATAGAT----ATATca-gatagcatagttgctaaacgcccaggggctcaggattcagactgtctg---gttcaaaacctgacatcat------------ccatcactggatctgtgaccttgggaaaagggagataataataggacttatttca-ctgggctgttgtgaggattccataagatgatataggtgaactgcctTGTATGTTC--AATAAGCTGGGCTATTGA-TGC---gatgatgatgatgatgatgatgatgatggtgatgatggtgatgatggtgatagggatggtgatgatgatgatgatgatggtgacgatgttgataataatgTTGC--ACAGGATCAGGAAACAGTATAACAGGAAAACATTTACTCAGGTATAAGTCACACAC---TAGGAGCTATGAACTCTTCGTGTTTGTTAATCTTCCTAGGAATTCTCATCCATGTCCGTGGAGTTCAGTGACACTTGTTTATTGAAGATCCTCAAATCAGTGTCCTTCCTCTATGCTTGTCTCAGAACAAGGCTCACAAGACCACTAATAGCCGAATCTTCATCTCTTCTTGCTGAACCATGGGTCTtttctccaacctgcttgtgcttttcatactcc-aaaacttggcaaaaggtcctctttctatctttaatgtccccacttcttgaccatcaggcaaatttctgctcatttatcgatgctcaagcactaagtccttcataagagccttgaactcctttttgttgatttaggtctctacctctcacccctctcctttgctttaatgtttttattgtatctcactcatactccattatagcattcatcctattatgctggaaatcacttgtacatctctc-ccacattcccctgtgtgtactgtgaaagcagggactgcatcttacatctctgggtaccagcatccaccacagc i canFam3.chr16 C 0 C 0 a score=507073.000000 s hg38.chr4_KI270785v1_alt 14169 157 + 119912 attttgcatagggaggacactcaatgcaattttggtgaaggaataaaGTGTGTCTAGAGAAACAGCAGGAAGGTTAGGTGGGCTGAAAATGATTTTGGTTTTATCAGCACCACTTTTACTATAGTAGACTC--GACGCCGTGT--CTCATTTCTTCTTGTG s panTro4.chr4 190286722 156 + 193495092 attttgcatagggcggacactcaatgcaattttggtgaaggaataaaGTGTGTCTAGAGAAACAGCAGGAAGGTGAG-TGGGCTGAAAATGGTTTTGGTTTTATCAGCACCACTTTTACTATAGTAGACTC--GACGCCGTGT--CTCATTTCTTCTTGTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195252236 157 + 198332218 attttgcatagggcagacactcaatgcaattttggtgaaggaataaaGTGTGTCTAGAGAAACAGCAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTACAGTAGACTC--GACGCCATGT--CTCATTTCTTCTTGTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111224285 157 + 115148730 attttgcatagggcagatactcaatacaattttggtgaaggaataaaGTGTGTCTAGAGAAATAGCAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTATAGTAGACTC--GACGCCGTGT--CTCATTTCTTCTTGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181027328 157 + 184069350 attttgcatagggtggacactcagtacaattttgatgaaggaaAAAAGTGTGTCTAGAGAAATAACAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTGCAGTAGACTC--GACGTCATGT--CTCATTTCTTCTTGTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186364508 157 + 189454096 attttgcatagggtggacactcagtacaattttgatgaaggaaAAAAGTGTGTCTAGAGAAATAACAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTGCAGTAGACTC--GACATCATGT--CTCATTTCTTCTTGTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175979803 157 + 178775436 ATTTTGCATAGGGTGGACACTCAGTACAATTTTGGTGAAGGGAAAAAGTGTGTCTAAAGAAATAACAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTGCAGTAGACTC--GACGTCATGT--CTCATTTCTTCTTGTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132822617 157 + 135778131 attttgcatagggcggacactcagtacaattttggtgaaggaaAAAAGTGTGTCTAGAGAAATAACAGGAAGGTGAGGTGGGCTGAAAATAGTTTTGGTTTTATCAGCACCACTTTTACTGCAGTAGACTC--GACGTCATGT--CTCATTTCTTCTTGTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188204251 142 - 190850796 actttgcctggggtggacattcaatatgactttggtaaagggata--------------aaATAACGCGAGGG---GAGGGGCTGAGAAGAGTTTCCGTTTCATCAGCACCACTTTCACTACAGTAGACTC--GACGCCGTGTTGTCTGTTTCTTCTTGGG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15698083 159 - 59632846 accgtgcatatagtaaacattcaatagacacttggtgaaggaatgaaATGTGTCTGGAGAAGTCACAAAAAGGCAAGGTGAGTTGAAAATAGTTTTGGCTTTATCAGCTCCAGTTTTACTAAAATAGACTCTTGACTCCATAT--CTCAATTCTCCCTGTG i canFam3.chr16 C 0 C 0 e mm10.chr8 84693497 0 - 129401213 C a score=2076925.000000 s hg38.chr4_KI270785v1_alt 14326 672 + 119912 CTCACATCTAGCAAATTTGAGTGTCCTGGAAATAGTTT-----TC-AGGGTGAGTTTTATCTTTCTCTATGAAAGATGTGCAACAATGCTCTATGAAGGAAAGGCGCACATTGAGTTTCTGATATGATCTATAGAGTGTCATCACCCAGATTCC-AAGCAGCCCCATCAGGACAGAGCCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAATGGTTGCATGAAAGCCAAGAATAAACAGTACCTGGATAATGAAAATGAAAGCACCACTGCTCCACCCACATCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGATTTTTCAGT--CCTTAGAGTGACTCAATTGTGTTTAACATCAGTCCTATCGAATACCAACATCAAGACTATTTTTT-TCTTC----TCATTGCTAATGATATTGCTACATTGTCTTCACCATTGTGAAACTTGCTGA-----GAAACTTGTATATAACCTTCAAAACCCAAG-TATGTGTGCCCTGCGAAGACTGCATGTCACTAGCTATGAGTGACTGATGTGCGTGA---CAAGGGGT-GCCGAAAGCCGAGCGATG--CCCTGCTGTGAAGAACCGTGGGC---TCTGGCTGGTTACAGAGCTG-----CCGTGTGAACTTCAAAC---CCATCTGAAGCCATCA--------------------------------------------------------CAACCTT--------TATTCTTTTACCCAGAACT s panTro4.chr4 190286878 676 + 193495092 CTCACATCTAGCGAATTTGAGTGTCCTGGAAATAGTTT-----TC-AGGGTGAGTTTTATCTTTCTCTATGAAAGATGTGCAACAATGCTTTATGAAGGAAAGGCGCACATTGAGTTTCTGATATGATCTATAGAGTGTCATCACCCAGATTCC-AAGCAGCTCCATCAGGACAGAGCCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTCGATGAATGGTTGCATGAAAGCCAAGAATAAACAGTACCTGGATAATGAAAATGAAAGCACCACTGCTCCACCCACATCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGATTTTTCAGT--CCTTAGAGTGACTCAGTTGTGTTTAACATCAGTCCTATCAAATACCAACGTCAAGACTATTTTTT-TCTTCATTCTCATTGCTAATGATATTGCTACATTGTCTTCACCACTGTGAAACTTGCTGA-----GAAACTTGTATATAACCTTCAAAACCCAAG-TATGTGTGCCCTGCGAAGACTGCATGTCACTAGCTATGAGTGACTGATGTGCGTGA---CAAGGGGT-GCCGAAAGCCGAGCGATG--CCCTGCTGTGAAGAACCGTGGGC---TCTGGCTGGTTACAGAGCTG-----CCGTGTGAACTTCAAAC---CCATCTGAAGCCATCG--------------------------------------------------------CAACCTT--------TATTCTTTTACCCAGAACT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195252393 676 + 198332218 GTCACATCTAGCGAATTTGAGTGTCCTGGAAATAGTTT-----TC-AGGGTGAGTTTTATCTTTCTCTATGAAAGATGTGCAACCATGCTCTATGAAGGAAAGGTGCACATTGAGTTTCTGATATGATCTATAGAGTATCATCACCCAGATTCC-AAGCAGCTCCACCAGGACAGAGCCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAACGGTTGCATGAAAGCCAAGAATAAACAGTACCTGGATAATTAAGATGAAAGCACCACTGCTCCACCCACATCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGATTTTTCAGT--CCTTAGAGTGACTCAAGTGTGTTTAACATCAGTCCTATCAAATACCAATGTCAAGACTATTTTTT-TCTTCATTCTCATTGCTAATGATATTGCTACATTGTCTTCACCATTGTGAAACTTGCTGA-----GAAACTTGTATATAACCTTCAAAACCCAAG-TATGTGTGCCCTGTGAAGACTGCATGTCACTAGCTGTGAGTGGCTGATGTGCATGA---CAAGGGGT-GCAGAAAGCCGAGCGATG--CCCTGCTGTGAAGAACCATGGGC---TCTGGCTGGTTACAGAGCTG-----CCGTGTGAATTTCAAAC---CCATCTGAAGCCATCG--------------------------------------------------------CAACCTT--------TATTCTTTTACTCAGAACT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111224442 670 + 115148730 GTCACATCTAGCGAATTTGAGTGTCCTAGA------TT-----TC-AGGGTGAGTTTTATCTTTCTCTATGAAAGATGTGCAACAATGCTCTATGAAGGAAAGGCGCACATTGAGTTTCTGATATGATCTATAGAGTATCATCACCCAGATTCC-AAGCAAGTCCACCAGGACAGAGCCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAACGGTTGCATGAAAGCCAAGAATAAACAGTACCTGGATAATGAAGATGAAAGCACCACTGCTCCACCCACATCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGATTTTTCAGT--CCTTAGAGTGACTCAATTGTGTTTAACATCAGTCCTATCAAATACCAACGTCAAGACCATTTTTT-TCTTCATTCTCATTGCTAATGATATTGCTACATTGTCTTCACCAGTGTGAAACTTGCTGA-----GAAACTTGTATATAACCTTCAAAACCGAAG-TATGTGTGCCCTGTGAAGACTGCATGTCACTAGCTGTGAGTGACTGATGTGCATGA---CAAGGGGT-GCAGAAAGCCGAGCGATG--CCCTGCTGTGAAGAACCATGGGC---TCTTGCTGGTTACAGAGCTG-----CCGTGTGAATTTCAAAC---CCATCTGAAGCCATCG--------------------------------------------------------CAACCTT--------TATTCTTTTACCCAGAGCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181027485 657 + 184069350 GTCACATCTAGCGAATTCGAGTGTCCTGGAAATAGTTT-----TC-AAGGTAGGTTTTATCTT----TAGGAAAGACGTGCAACAATGCTCTATGAAGGAAAGGTGCACACTGAGTTTCTGATATGATCTACAGAGTACCATTACCCAGATGCC-AAGCAGGCCCACCAGGACAGAGGCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAACAGATGCATGAAAGCCAAGAATAAAC-ATACCTGGATAATTAAGATGAAAGCTCCCCTGCTCCACCCACACCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGACTTTTCCGT--CCTTAGAGTGACTCAATCATGTTTAGTATCAGTGCTATCAAATGCCAACGTCAAGACTATTTTTT-TCTTCATTCTCATTGCTATTGATATTGCTCCATTGTCTTCACCAGTGTGAAACTTGC-----------------ATATAATCTTCAAAATCCAAG-TACGTGTGCCCTGTGAAGACTGAATGTCACTAGCTGTGAGTGACTGATGTGCATGA---CAAGGGGT-GCTGAAAGCCGAGTGCTG---CCTGCTGTG-AGAACTGTGGGC---TCCGGTTGGATACAGAGCTG-----CTGTGTGAATTTCAAAC---CCATCTGAAGCCATTG--------------------------------------------------------CAGCCTT--------TATTCTTTTACCCAGAACT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186364665 657 + 189454096 GTCACATCTAGCGAATTCGAGTGTCCTGGAAATAGTTT-----TC-AAGGTAGGTTTTATCTT----TAGGAAAGACGTGCAACAATGCTCTATGAAGGAAAGGTGCACACTGAGTTTCTGATATGATCTACAGAGTACCATCACCCAGATGCC-AAGCAGGCCCACCAGGACAGAGGCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAACAGATGCATGAAAGCCAAGAATAAAC-GTACCTGGATAATTAAGATGAAAGCTCCCCTGCTCCACCCACACCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGACTTTTCCGT--CCTTAGAGTGACTCAATCGTGTTTAGCATCAGTCCTATCAAATGCCAACGTCAAGACTATTTTTT-AATTCATTCTCATTGCTATTGATATTGCTCCATTGTCTTCACCAGTGTGAAACTTGC-----------------ATATAATCTTCAAAATCCAAG-TACGTGTGCCCTGTGAAGACTGAATGTCACTAGCTGCGAGTGACTGATGTGCATGA---CAAGGGGT-GCTGAAAGCCGAGTGCTG---CCTGCTGTG-AGAACTGTGGGC---TCCGGTTGGATACAGAGCTG-----CTGTGTGAATTTCAAAC---CCATCTGAAGCCATTG--------------------------------------------------------CAGCCTT--------TATTCTTTTACCCAGAACT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175979960 657 + 178775436 GTCACATCTAGCGAATTCGAGTGTCCTGGAAATAGTTT-----TC-AAGGTAGGTTTTATCTT----TAGGAAAGACGTGCAACAATGCTCTATGAAGGAAAGGTGCACACTGAGTTTCTGATATGATCTACAGAGTATCATCACCCAGATGCC-AAGCAGGCCCACCAGGACAGAGGCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGA--GACACACAGTATTTGATGAACAGATGCATGAAAGCCAAGAATAAAC-GTACCTGGGTAATTAAGACGAAAGCTCCCCTGCTCCACCCACACCTTGAGGTATTTGCTTTAGTTCCCTAGAGGGAGTTTTCCGT--CCTTAGAGTGACTCAATCGTGTTTAGCATCAGTCCTATCAAATGCCAACGTcaagactatttttt-tcttcattctcgtTGCTAATGATATTGCTCCATTGTCTTCACCAGTGTGAAACTTGC-----------------ATATAATCTTCAAAATCCAAG-TACGTGTGCCCTGTGAAGACTGAATGTCACTAGCTGTGAGTGACTGATGTGCATGA---CAAGGGGT-GCTGAAAGCCGAGTGCTG---CCTGCTGTG-AGAACTGTGGGC---TCCGGTTGGATACAGAGCTG-----CTGTGTGAATTTCAAAC---CCATCTGAAGCCATTG--------------------------------------------------------CAGCCTT--------TATTCTTTTACCCAGAACT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132822774 656 + 135778131 GTCACATCTAGCGAATTCGAGTGTCCTGGAAATAGTTT-----TC-TAGGTAAGTTTTATCTT----TATGAAAGACGTGCAACAATGCTCTATGCAGGAAAGGTGCACACTGAGTTTCTGATATGATCTACAGAGTATCATCACCCAGATGCC-AAGCAGGCCCACCAGGACAGAGGCTCTTCTT---GTTAGATCAGTGCCTGCCATGGAGGC--GACACACAGTATTTGATGAACAGATGCATGAAAGCCAAGAATAAAC-GTACCTGGATAATTAAGATGAAAGTACCCCTGCTCCACCCACACCTTGATGTATTTGCTTTAGTTCCCTAGAGGGACTTTTCAGT--CCTTAGAGTGACTCATTCGTGTTTAGCATCAGTCCTATCAAATGCCAACGTCAAGACTATTTTTT-TCTTCATTCTCATTGCTAATGATATTGCTCCATTGTCTTCACCAGTGTGAAACTTGT-----------------ATATAATCTTCAAAATCCAAG-TACGTGTG-TTTGTGAAGACTGAATGTCACTAGCTGTGAGTGACTGATGTGCATGA---CAAGAGGT-GCTGAAAGCCGAGTGCTG---CCTGCTGTG-AGAACTGTGGGC---TCCGGTTGGATACAGAGCTG-----CTGTGTGAATTTCAAAC---CCATCTGAAGCCATTG--------------------------------------------------------CAGCCTT--------TATTCTTTTACCCAGAACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188204393 657 - 190850796 GTCACATGTAGCAAATTTGAGTGTCCTGGAAATAGTTT-----TC-AAGGTGAGTTTGAGCTTTCTCTAAGAAAGATGTGCACCACTGCTCTGTGAAGGCAAGATGCACACTGTGTTTCTGATAGGACATGTGGAGTCTCACCACCCAGATTCC-CAGCAGGTGCACCAGGACAGAGATTCTTGCT---GTTAGATCAGTGCCTGGCACGGAGGA--GACACACAGTATT---TGAACGAATGCATGAAAGCCAAGAACAAACAGCATCAGGATAATGAAGGTGACAGCAGCACTGCT-CACCCACATATGGAGGTGTTTGCTTCAGTTTTCTCCAGGGCTTTTTTGGG--CCTTGGAGTGACTCGGTTGCGTTTGGCGTCAGTCCTGTCCAATGCCGATGTCAGGACCCCCTTTCATCTTCATTCTCATTGCTAATGATATGGCTACATTGTCTTCACCAGTATGAAACCTGCTCA-----GAAACTTGTATCTAACCTTCAACACGCAAC-TACGTGTGCTCTGTGAAGGCTGCACGTCACTGGCTATGAGTGACTGAGGTCCGTGA---CAAGGGAT-GCTGAAGGCCGAGAGATG--CCCTGCTGGGAACAGCCGTGGAC---TCGGCCCGGTTACAGAGCGG-----CTGTGTGAATTCCAGAC---CCA------------------------------------------------------------------------CCTT--------TATTCTCCTCCCCAGCACT i calJac3.chr3 C 0 I 110 s mm10.chr8 84693497 729 - 129401213 CCCACTCCCAGCAAAATTGAGTGTCTTGAAAATAGTTC-----CCTAGAATCAACTTGACCTTCATCTATGAGAGATATGCAATCAGGCTCTGTGGAAAAACAGTGCATAGTATATCGCTAATATTATGTGTTCAGGATCACAGCTTGATTTCA-AAGCAGCTCTACCTGGCCAGATACCTTCCTT---AATAGATTAGTGAGTGGCTCAGCGGATGTGCACACAGTATTTGGTGAGTGAATGTGCACCATCGTAGGACACAGAGTATCCAGTCAATCAAGATGGAAGGGCCAGTGCTCCCTGTGCCTATTCAGCCCAGTGCTTTAGTGCCTTAGGG------TTAAGGCACCTTAGAGC-ACT---TTGAGCTTCCCATCAGCCCTACCAAATGCCAACATCAAAAGGACCTTCT------------GTTTCCAACGTTGTTGTTAC---GGCTGCCCCAGTATT---CTTGCTCACTTATAGGAGTCGTTGAGAAGGCCCAGGCTCTGAGTTGCATGTTAGCTGTGAGACCT-----------GCTGGGAGTACTTGATCTATAAGGACCCAGAGGGA-ACTCAGAGCCCAGTGGGGAGAACTGCAGAAGACAtctgtatgtctgtctgcctgcctgcctttctgtctttctgtctgtctgtctgtctgtctgtctctatctatcatctatctatctatctatctatctatctatctatctatctatctatcttctatgtatcagtcttctatcatctatttatgtacctacccat i mm10.chr8 C 0 I 10 s canFam3.chr16 15698242 641 - 59632846 GTCACGTCTAGCAAATTTGAGTGTCTTGGAAGCAGTCTATGCATA-TGGGGGAGTTTTATCTTTCTCTATGAAAGATATGCAA-AGTGCTAGATGGAGATGA-GTGAATATTGTATTTACCATATTAGATATTGAACAGAATAGCCCAGATTTCAAAGCAGCTTGATTACGACAGAGTTTTTCCCTGCAGTTAGGTCA-------------------GACATACAGCATTTGGTGAATGAATGTCTGGAAGTGAAGGAATAACATTATCTGAATAATTAAGACAAAACCCCCAGTGTTCTCTGCGCTTATTCAGGTACTTGCTTCAGTTCCTTAGTGTGATATTCCAAT--CTTTAGAGTGACTCA-CTATGTTTAACATCAGTCCTATCAAATGCCAATGTCAAAACGTCCTCTC-TCTCCATCCTTGTTGCTAATGACACCTTCACAATGTCCTCATCAGTGTGGGACTTTCTGA-----GGAACTTGTATACAACCTTCAAAACCCAAC-TACACATGCTCTCTGAAAGTTGAAAGTCA----CTGTGAGTTCTTGATGCATATGA--CCAAGAGGTGGCTTCAATCCTACAGATG--CCCTACTAGGAAGAATAATGGAC---TCTGGCTGCCCTCAGAGCTG-----TTAGGTAAATTCTGAAC---CCACCTGGAGATATTC--------------------------------------------------------TAGC------------------------------ i canFam3.chr16 C 0 C 0 a score=140771.000000 s hg38.chr4_KI270785v1_alt 14998 59 + 119912 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCTAGCCCTGGAAGGTCTAGAAGT-------CAGTC s panTro4.chr4 190287554 59 + 193495092 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCTAGCCCTGGAAGGTCTAGAAGT-------CAGTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195253069 59 + 198332218 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TGTTTTACCCAGCCCTGGAAGGTCTAGAAGT-------CAGTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111225112 59 + 115148730 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCCAGCCCTGGAAGGTCTAGAAGT-------CAGTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181028142 59 + 184069350 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCCAGCCCTGGAAGGTCTAGAAGC-------CAGTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186365322 59 + 189454096 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCCAGCCCTGGAAGGTCTAGAAGC-------CAGTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175980617 59 + 178775436 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCCAGCCCTGGAAGGTCTAGAAGC-------CAGTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132823430 59 + 135778131 GGTGAAACCATTGTAATCTTTAT-------------------------------------------------------TCTTTTACCCAGCCCTGGAAGGTCTAGAAGC-------CAGTC i chlSab2.chr7 C 0 C 0 s mm10.chr8 84694236 121 - 129401213 gtttatcttctattaatctttatctacatatctacctatctacctatctatctatctatctatctatctatctatctatctatcatctatctTTTCTAAATCTAGAATCGAAACTTCAGTT i mm10.chr8 I 10 C 0 s canFam3.chr16 15698883 38 - 59632846 ---------------------AC-------------------------------------------------------ATTTTTACCTAGAAATGGAAAGCTGAGACTC-------AAGTG i canFam3.chr16 C 0 C 0 e calJac3.chr3 188205050 110 - 190850796 I a score=575211.000000 s hg38.chr4_KI270785v1_alt 15057 185 + 119912 ACTTGCTGAG--AG-ATGTTGAGATGCTGTTCCTCCATGGATCTTCTGCACCAGAAATACGACTTAAGACCTCTCTGCCA-CACTCTGCAATCATTCCTCCTTCCTCATGCCTGGCTAAGG-TGGTCCTCAGGGGTCAttttcaa-actgttggtcacaacctcttcattggtc-tgaaattaatctagtag s panTro4.chr4 190287613 185 + 193495092 ACTTGCTGAG--AG-ATCTTGAGACGCTGTTCCTTCATGGATCTTCTGCACCAGAAATACGACTTAAGACCTCTCTGCCA-CCCTCTGCAATCATTCCTCCCTCCTCATGCCTGGCTAAGG-TGGTCCTCAGGGGTCAttttcaa-actgttggtcacaacctcttcattggtc-tgaaattaatctagtag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195253128 185 + 198332218 ACTTGCTGAG--AG-ATCTTGAGACACTGTTCCTCCCTGGATCTTCTGCACCAGAAATATGATTTAAGACCTCTCTGCCA-CCCTCTGCAATCATTCCTCCCTCCTCATGCCTGGCTAAGG-TGGTCCTAAGGGGTCAttttcaa-actgttggtcacaacctcttcattggtc-tgaaattaatctagtag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111225171 185 + 115148730 ACTTGCTGAG--AG-ATCATGAGACACTGTTCCTCCACGGATCTTCTGCACCAGAAATATGACTTAAGACCTCTCTGCTG-CCCTCTGCAATCATTTCTCCCTCCTCATGCTTGGCTAAGG-TGGTCCTAAGGGGTCAttttcaa-actgttggtcacaacctcttaattggtc-tgaaattaatctagtag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181028201 185 + 184069350 ACTTGCTGAG--AG-ATCTTGAAACACTGTTCCTCCATGGATCTTCCGCACCAGAAATTCGGCTGACGATCTCTCTGCCA-CTCTCTGCAATCATTTCTCCCTCCTCATGCTTAGCTAAGG-TGGTCCTAAGTGGTCAtttttaa-actgttggtcacaacctcttaattggtc-tgaaattaatctagtag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186365381 185 + 189454096 ACTTGCTGAA--AG-ATCTTGAAACACTGTTCCTCCATGGATCTTCCGCACCAGAAATTCGGCTGACGATCTCTCTGCCA-CTCTCTGCAATCATTTCTCCCTCCTCATGCTTAGCTAAGG-TGGTCCTAAGTGGTCAtttttaa-actgttggtcacaacctcttaattggtc-tgaaattaatctagtag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175980676 185 + 178775436 ACTTGCTGAG--AG-ATCTTGAAACACTGTTCCTCCATGGATCTTCCGCACCAGAAATACGGCTGACGATCTCTCTGCCA-CTCTCTGCAATCATTTCTCCCTCCTCATGCTTAGCTAAGG-TGGTCCTAAGTGGTCATTTTTAA-ACTGTTGGTCACAACCTCTTAATTGGTC-TGAAATTAATCTAGTAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132823489 185 + 135778131 ACTTGCCAAG--AG-ATCTTGAAACACTGTTCCTCCATGGATCTTCCGCACCAGAAATACGGCTGAGGATCTCTCTGCCA-CTCTCTGCAATCATTTCTCCCTCCTCATGCTTAGCTAAGG-TGGTCCTAAGTGGTCAtttttaa-actgttggtcacaacctcttaattggtc-tgaaattaatctagtag i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188205160 179 - 190850796 ACTTGCCGTG--AG-TTCTT-AAACACGGTTCCTTCCCGGATCTT---CACCAGAGATATGACTGAAGAC--CTAGGCCA-GTCTCTGCAATCGTTTCTCCATCCTCATGCTTGGCGAAGG-TGGCCCTAAGGGGTAATTTTTAA-ACTCTTGGTCACAAGCTATTAATTGGTC-TGAAATTAATCTAGTAG i calJac3.chr3 I 110 I 109 s mm10.chr8 84694357 181 - 129401213 AGTTGCTGAGCCCT-GTCACAGAACACTGCTGTCCTACT--TCTTCCTGATTGAGGATGTCACCTAAGA------TGCCAGTCCTTTGCAGTCATTACAACAT--TCACACTTTGTCAAGGAAGGTCCTAAGGGCTGATTTTGAACGTTATAGATCTCTTCCTATTAACCAGTTATGAAATTGAGCTAATCA i mm10.chr8 C 0 C 0 s canFam3.chr16 15698921 181 - 59632846 AATTGCTGAA--AGCAGCTGGACACGTTGCGCCCTCAGAGACCCTCTGCACAAGAGATGTGACTTCAGAC--CTAAGTTG-TTCTCTTTGGCCATGTCATAACCCTCATGCTTACCTGGGG-TGGTTCTAAAGGTTTTGAGAAAA-ATCAGAAATCATAACTTATTAACTGGTCATGAAAGTAATTTA---- i canFam3.chr16 C 0 C 0 a score=1033444.000000 s hg38.chr4_KI270785v1_alt 15242 364 + 119912 gttgcaaacagcactcaaaaaggagatagactagaacagaccagtatattttacatagtaaggctaagtgttatttcatgaaagtttttttttggttttcaaaaca------------cacctctctctct-----------------------------------------------gtg-------------------------gtgtggtgtgtgt----------actgggtactgatagaaaatttatttcttactctgggttgcagtaaaagcagtt---tgaaagcTCCTACCTTGGAAACTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAACCATGCTGTAAAGCCAAACAGCTAACCTGTGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCGATGCCAACTCTCAG-GATTCATACAAATGGAAGACA s panTro4.chr4 190287798 364 + 193495092 gttgcaaatagcactcaaaaaggagatagactagaacagaccagtatattttacatagtaaggctaagtgttatttcatgaaagttttgttttggttttcaaaaca------------cacctctctcttt-----------------------------------------------gtg-------------------------gtgtggtgtgtgt----------actgggtactgatagaaaatttatttcttactctgggttgcagtaaaagcagtt---tgaaagctcctgCCTTAAAAACTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAACCACGCTGTAAAGCCAAACAGCTAACCTGCGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCAATGCCAACTCTCAG-GATTCATACAAATGGAAGACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195253313 364 + 198332218 gttgcaaacagcactcaaaaaggagatagactagaacagaccagtatattttacatagtaaggctaagtgttatttcatgaaagttttgttttggttttcaaaaca------------cacctttctctct-----------------------------------------------gtg-------------------------gtgtggtgtgtgt----------actgggtactgatataaaatttatttcttactctgggttgcagtaaaagcagtt---tgaaagctcctgCCTTAGAAACTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAACCACGCTGTAATGCCAAACAGCTAACCTGTGACACTGCTGGGCACACACTGAGGTATGTCTCATGGCTGT-TACCGATGCCAACTCTCAG-GATTCATACAAATGGAAGACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111225356 364 + 115148730 gttgcaaacagcactcaaaaaggagatagaatagaacagaccagtatattttacatagtaaggctaagtgttatttcatgaaagttttgtttgggttttcaaaaca------------cacctctctctct-----------------------------------------------gtg-------------------------gtgtggtgtgtgt----------actgggtactgatataacatttatttcttactctgggttgcagtaaaagcagtt---tgaaagctcctgCCTTAGAAACTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAACCACGCTGTAATGCCAAACAGCTAACCTGTGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCGATGCCAACTCTCAG-GATTCATACAAATGGAAGACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181028386 365 + 184069350 gttgcaaacagcactcaaaaaggaaatagaatagaacatgccagtatattttagatagtaagggtgagtattatttcatgcaagttttgttttggtttttaaaaca------------tacctctctctc-------------------------------------------------tg-------------------------gtgtggtgtgtgt----------actgggtactgatataaaatttttttcttactctgggttgcaggaaaagcagtttggtgaaagctcctgCCTTAGAAGCTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAGCCATGCTGTAATGCCAAAGAGCTTTCCTGTGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCAATGCCAACTCTCAA-GATTCTTATGAATGGAAGACA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186365566 365 + 189454096 gttgcaaacagcactcaaaaaggaaatagaatagaacatgccagtatattttagatagtaagggtgagtattatttcatgcaagttttgttttggtttttaaaaca------------tacctctctctc-------------------------------------------------tg-------------------------gtgtggtgtgtgt----------actgggtactgatataaaatttttttcttactctgggttgcaggaaaagcagtttggtgaaagctcctgCCTTAGAAGCTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAGCCATGCTGTAATGCCAAAGAGCTTTCCTGCGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCAATGCCAACTCTCAA-GATTCTTATGAATGGAAGACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175980861 365 + 178775436 GTTGCAAATAGCActcaaaaaggaaatagaatcGAACATACCAGTATATTTTACATAGTAAGGGTAAGTATTGTTTCatgcaagttttgttttgttttttaaaaca------------tacctCTCTCTC-------------------------------------------------TG-------------------------GTGTGGTGTGTGT----------ACTGGGTActgatataaaatttattttttactctggGTTGCAGGAAAAGCAGTTTGATGAAAGCTCCTGCCTTAGAAACTCTGAAGCAGCCTGGGGTTTGGATGTGGATCAGGGAGTCACAGCCACGCTGTAATGCCAAAGAGCTTTCCTGCGACACTGCTGGGCACAGACTGAGGTATGTCTCGTGGCTGT-TACCAATGCCAACTCTCAA-GATTCTTATGAATGGAAGACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132823674 363 + 135778131 gttgcaaacagcactcaaaaaggaaatacaatagaacatgccagtatattttacatagtaagggtaagtattatttcatgcaagttttgttttggtttttaaaaca------------tacctctctctc-------------------------------------------------tg-------------------------gtgtggtgtgtgt----------actgggtactgatataaaatttatttcttactctgggttgcaggaaaagcagtttgatgaaagctcctgCCTTAGAAACTCTGAAGCAGCCTGGGGTTTGGATGTGAATCAGGGAGTCACAGCCACGCTGTAATGCCAAAGAGCTTTCCTGTGACACTGCTGGGCACAGAC--AGGTATGTCTCGTGGCTGT-TACCAATGCCAAATCTCAA-GATTCTTATGAATGGAAGACA i chlSab2.chr7 C 0 C 0 s mm10.chr8 84694538 409 - 129401213 TTTGTAGAAATTGCTTTAAAATCTTGTAGAATAAAATATATCAGTATATTTTATAAGACAAGGTTTCATATCGTTTGACAAAACTTCTCTTTTTGTTTTTAAAATATATACCTGTTCCTACCCCTGTCTTCATCGCTTAGCATGTGGACACACATTTGTGTATGAGTGTGTGAGTAGAGAG-------------------------GAGAGGTTCAtgt----------gctgggtattcatgtaaaatgtatttcttactcggggttgcagc-aaagttatt---tgaaagctgctgTTTTAGAAACTGTGAAGCAACCTGAGGCTTGGATGGTGATCAAGGA-----AACCA----GTAATACGGAAGAGCTCAACCAGATCACAGCTTG--ACAGACC----CATGTGTCATGGGCATCTATGAAACCCTAGTTTCAATTGTTCATGTAATTGGAAGACA i mm10.chr8 C 0 C 0 s canFam3.chr16 15699102 378 - 59632846 -----------------AAAACCAGATAGGATACTACACACCTGTATATTTTACATAGGAAGAACAAGTATTGTTCCATGAAGCTTTTGTATCATTTTAAAGATTA------------TGCCTGTTTCTGT-----------------------------------------------GTGTGTTGGGAGGATGATAGGTGGGTGAGTGTGATGTGAgtgtaatctgtggttgggtctcgatat---atttatttcttactctgagttgcagtaaaaacagct---tgaaacctactgTCTTAGAAACTCTGAAGCAACCTGGGGTTAGGATGTTTTTCAAGGAATCAAAACCACCCTGTAATATCAAACAGCTAAACTGGAACATGGCTTGGCACAGACTTATGT-TGTCATGTGACTTC-T-TCAGTGCCAACTCTCAATTATTCATagaaatggaagaca i canFam3.chr16 C 0 I 157 e calJac3.chr3 188205339 109 - 190850796 I a score=1143297.000000 s hg38.chr4_KI270785v1_alt 15606 409 + 119912 AGAATATCTTAGGTAATCTACAAA--------TCCCCAGGTCTGATTTAACTCACCTTTCTCCCTTACtttgagaaacatctgttgcatatctagcatgcgccggg--cagttctagatgctggg---aa--gatagtgtgaaagtcaatccttgccctccctcatggaacAGAAGATGCT-TCCTACAAAAAGTCTTACAATTCTGAGTAACTAAGTTAACTGGTTTATTTTATTGCCTCCTTTTCCCCAGCCTGTCAGTCTTTTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACAGG-AAAAAAAATCGAGTCTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATATACATGATTAACTTCTAAAGTTGGC s panTro4.chr4 190288162 409 + 193495092 AGAATATCTTAGGTAATCTACAAA--------TCCCCAGGTCTGATTTGACTCACCTTTCTCCCTTACtttgagaaacatctgttgcatatctagcatgcgtcggg--cagttctagatgctggg---aa--gatagtgtgaaagtcaatccttgccctccctcatggaacAGAAGATGTT-TCCTACAAAAAGTCTTACAATTCTGAGTAACTAAGTTAACTGGTTTATTTTATTGCCTCCTTTTCCCCAGCCTGTCAGTCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACAGG-AAAAAAAATCGAGTCTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATATACATGATTAACTTCTAAAGTTGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195253677 397 + 198332218 AGAATATCTTAGGTAATCTACAAA--------TCCCCAGGTCTGATTTGACTCACCTTTCttccttactttgagaaacatctgttgcatatctagcgtgcattggg--cagttctagatgctggg---aa--gatagtgtgaaagtccatccttgccctcctgcatggaacAGAAGATGTT-------------TCTTATAATTCTGAGTAACTAAGTTAACCGGTTTATTTGATTGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACATG-AAAAAAAATCTAGTCTGAATAACATATAATTAGCCCCTTGA-TATTTAAGGCAATAGGGGAAATAAT--AATGTCATATACATGATTAACTGCTAAAGTTGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111225720 409 + 115148730 AGAATATCTTAGGTAATCTGCAAA--------TCCCCAGGTCTGATTTGACTCACCTTTCTCCCTTACttgaagaaacatctgttgcacatctagcctgcgttggg--cagttctagatgctggg---aa--gatggtgtgaaagtcaaaccttgccttccctcatggaAGAGAAGACGTT--TCTACAAAAAGTCTTACAATTCTGAGTAACTAAGTTAACTGGTTTATTTTATTGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTAATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACTAGAGGAAAAGAACAGGAAAAAAAAATCGAGTCTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATATACATGATTAACTTCTAAAGTTGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181028751 403 + 184069350 AGAATATCTTAGGTAATCTACAAA--------TCCCCATGTCTGATTTGACTCACCTTTCTCCCTTACTTTGAG-aacatctgttgcatatctagcatgtgtctgg--cagttctagatgctggg---aa--gataatgtgaaagtcaatgcttgccct----catggaacAGAAGACGTT-TCCTACAAAGAGTCTTA-AGTTCTGAGTAACTGAGTTAACTGGTTTATTTTATCGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACAGG-AAAAAAAGTAGAGATTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATACACATGATTAACTTCTAAAGTTGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186365931 403 + 189454096 AGAATATCTTAGGTAATCTACAAA--------TCCCCATGTCTGATTTGACTCACCTTTCTCCCTTACTTTGAG-aacatctgttgcatatctagcatgtgtctgg--cagttctagatgctggg---aa--gataatgtgaaagtcaatgcttgccct----catggaacAGAAGACGTT-TCCTACAAAGAGTCTTA-AGTTCTGAGTAACTGAGTTAACTGGTTTATTTTATCGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACAGG-AAAAAAAGTAGAGATTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATACACATGATTAACTTCTAAAGTTGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175981226 403 + 178775436 AGAATATCTTAGGTAATCTACAAA--------TCCCCATGTCTGATTTGACTCACCTTTCTCCCTTACTTTGAG-AACATCTGTTGCATATCTAGCATGTGTCTGG--CAGTTCTAGATGCTGGG---AA--GATAATGTGAAAGTCAATGCTTGCCCT----CATGGAACAGAAGATGTT-TCCTACAAAGAGTCTTA-AGTTCTGAGTAACTGAGTTAACCGGTTTATTTTATCGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGaggaaaagaacagg-aaaaaaagtagAGATTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGCCATACACATGATTAACTTCTAAAGTTGgc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132824037 403 + 135778131 AGAATATCTTAGGTAATCTACAAA--------TCCCCATGTCTGATTTGACTCACCTTTCTCCCTTACTTTGAG-aacatctgttgcatatctagcatgtgtctgg--cagttctagatgctggg---aa--gataatgtgaaagtcaatgcttgccct----catggaacAGAAGACGTT-TCCTACAAAGAGTCTTA-AGTTCTGAGTAACTGAGTTAACTGGTTTATTTTATCGCCTCCTTTTCCCCAGCCTGTCAATCTTCTCTGATAAAAAGGCTAATAAACAGAAACCAGTTAAATAG-----CAACCAGAGGAAAAGAACAGG-AAAGAAAGTAGAGATTGAATAACACATAATTAGCCCCTTGA-TATTTGAGGCAATAGGGGAAATAAT--AATGTCATACACATGATTAACTTCTAACGTTGGC i chlSab2.chr7 C 0 C 0 s mm10.chr8 84694947 378 - 129401213 AG-TTATAGGAAATAACATATAAA--------TGCTCACGTCTAATTTGATTTA--TTTCCCTCTTAATTACAGaaacatctactgcatattccctgagtgttaggacctatactggatgctggg---agataatagtgtaaaagtcagttactattttccctcatggaacccaAGGCATT-TCCTAATAAAATGCCCACAGTTCT-----ACTGAGT--AGCAGCTTCTTGAAT---CCCGTCATCTCTAG-CTGCCACCCCTTCCCAATGAAAAGGCTAATAAACAGAAACTGGTCAAATAG-----CAACTAGAAGGGAAAAA---A-AATGACAACTGAGACTGAAT--------------------G-TATTTGAGGCCATAAGGCAAGTAACAGAACATCATATATATATTTAACTTCTTACATTGGA i mm10.chr8 C 0 C 0 s canFam3.chr16 15699637 418 - 59632846 AGGATATCTTAGAAAATTTACAAATTTCAGGTTTCTCAGGTATAATTTTGCTAACTTTTC-CCCTTACtttgagaaatatttatcgtatat--aata-gtgccagggactattctagatgctaggtcagt--aacagtggaaaagccagtcactgaatt----cacagaactcaGGACACTATCAAACAAAATGTCTTATAATTCTGAGTTACaatttttatta-tttttaaaatatCCTCCTTTTTTCCA-CCTGTCAACCTTCTCTGAGGAAAAGGCTAATGAATAGAAACTGGTCAAATAGGTGCACAAATGAAAGGGGAAAAAATG-GCAAAAATTTGAGCCTGGAAACCATATCATTAGCCCCTTGGCTATCTGAAGTAATAAAAGAAGTAAT--AATGTCAT-CACAAATTAGACTTCTAGAATTGGC i canFam3.chr16 I 157 I 13 e calJac3.chr3 188205339 109 - 190850796 I a score=57361.000000 s hg38.chr4_KI270785v1_alt 16015 24 + 119912 Taaaaaaa-ataaaggaaaaaacaa s panTro4.chr4 190288571 25 + 193495092 TAAAAAAATATAAAGGAAAAAACAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195254074 25 + 198332218 TAAAAAAATATAAAGGAAAAAGCAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111226129 25 + 115148730 CAAAAAAATATAAAGGAAAAAACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181029154 25 + 184069350 TAAAAAAATATAAAGGAAAAAGCAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186366334 25 + 189454096 TAAAAAAATATAAAGGAAAAAGCAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175981629 25 + 178775436 taaaaaaatataaaggaaaaagcaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132824440 25 + 135778131 TAAAAGAATATAAAGGAAAAAGCAA i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15700055 13 - 59632846 I e mm10.chr8 84695325 0 - 129401213 C e calJac3.chr3 188205339 109 - 190850796 I a score=49642.000000 s hg38.chr4_KI270785v1_alt 16039 17 + 119912 aaaaCCCTCAGTTCTAT s panTro4.chr4 190288596 17 + 193495092 AAACCCCTCAGTTCTAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195254099 17 + 198332218 AAACCCCTTAGTTCTAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111226154 17 + 115148730 AAACCCCTCAGTTCTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181029179 17 + 184069350 AAACTTCTCAGTTCTGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186366359 17 + 189454096 AAACTTCTCAGTTCTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175981654 17 + 178775436 aaactcCTCAGTTCTAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132824465 17 + 135778131 AAACTCCTCAGTTCTAT i chlSab2.chr7 C 0 C 0 s mm10.chr8 84695325 8 - 129401213 ---------GGTTCTAT i mm10.chr8 C 0 C 0 s canFam3.chr16 15700068 17 - 59632846 AAAATCGTCAGTTCTAT i canFam3.chr16 I 13 C 0 e calJac3.chr3 188205339 109 - 190850796 I a score=3702638.000000 s hg38.chr4_KI270785v1_alt 16056 970 + 119912 CTATGAGCCCAGCATGTCCA-GAGTATTGTCGGAGTGGCTGTTGTCTTTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGAAGGCCCCCATTTAGTTTTGTTGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTTT---CCCTGGCTATTTATTT---------TTCC-ATTTCCAGTCGCTCTA--TGCTAGATTGTAACATTCAGGGATTGGGGAGTACAATCGCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACTATTA-----AGGAAAG-----CAGCGTCTTTACTTTTTAAAGAGGAAAAAGAAAGAACGTATGCCACGGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACATTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTCTTCCCTGTAAGTCTGATCATTTTAGTTGAAAGTGTTTAGAC--TATCTCGTGTACTCAAGTACTCAT-CACGATAGAATTCCACCGTGTAAGGGCTTGGTGGCTTCTAAGCTCATATTTTC----TTTCTTTCTTTTCTCTCAACAAACTCAACT----------ATCATGTCATTTAACTTTAGGCTCCATCCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATACTGCAGGAATGGAGCTGCTCAATTTTC---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTCTGATGACACATCCGTAGCAACAGTAGTTTTATTTATAAGCAAAGGGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAAGGTTTATCAGGATTTCCAAAGGA----ATCTG-----TGGGAGGAAATCTACCAGTGATCACAGC-CATAATGAAACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTATTTTAA s panTro4.chr4 190288613 975 + 193495092 CTATGAGCCCAGCATGTCCA-GAGTATTGTTGGAGTGGCTGTTGTCATTGGGCATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGAAGGCCCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTTT---CCCTTGCTATTTATTT---------TTCC-ATTTCCAGTCGCTCCA--TGCTGGATTGTAACATTTAGGGATTGGGGAGTACAATCGCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----CAGCGTCTTTACTTTTTAAAGAGGAAAAAGAAAGAACGTATGCCATGGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTCTTCCCTGTAAGTCTGATCATTTTAGTTGAAAGTATTTAGAC--TATCTCGTGTACTCAAATACTCAT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTGGCTTCTAAGCTCATATTTTC----TTTCTTTCTTTTCTCTCAACAAACTCAACT-----TAACTATCATGTAATTTAACTTTAGGCTCCATCCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATACTGCAGGAATGGAGCTGCTCAATTTTC---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTCTGATGACACATCCGTAGCAACAGTAGTTTTATTTATAAGCAAAGGGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAAGGTTTATCAGGATTTCCAAAGGA----ATCTG-----TGGGAGGAAATCTACCAGTGATCACAGC-CATAATGAAACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTATTTTAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195254116 974 + 198332218 CTATGAGTCCAGCATGTCCA-GAGTATTGTTGCAGTGGCTGTTGTCATTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGGCGGCCCCCATTTTGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTTT---CCCTTGCTATTTATTT---------TTCC-ATTTCCAGTTGCTGTA--TGCTGGATTGTAACATTTAGGGATTGGTGAGTACAATCCCTTCAGAATAATCAGTCTTAAACATTCCCGGTTTAGTTAACCATTA-----AGGAAAG-----CAGCGTCTTTACTTTTTAAAGAGGAAAAAGAAAGAACATATGCCATGGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTAAGTTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTCTTCCCTGTAAGTTTGATCATTTTAGTTGAAAATGTTTAGAC--TATCTCCTGTACTCAAATACTCGT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTGGCTTCTAAGCTCCTATTTTC----TTTCTTTCTTTTCTCTCAACAAACTCAACT-----TAACTATCATGTAATTT-ACCTTAGACTCCGTCCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATACTGCGGGAATGGAGCTGCTCAATTTTC---------ACTGCGTTGCATT-TTTTATGATTGTTCCTTTACTTCCTGGTAGCATATTTTTGATGACACATCCGTAGCAACAGTAGTTTTATTTATAAGCAAAGAGAAGAAGAAATATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAACTGTAATTATGTCCACTTGTGGTGATGTGGTCCAGGGTTTATCAGGATTTCCAAAGGA----ATCTG-----TGAAAGGAAATCTACCAGTGATCACAAC-CATAGTGAAACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTATTTTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111226171 975 + 115148730 CTATGAGTCCAGCATGTCCA-GAGTATTGTTGGAGTGGCTGTTGGCATTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----GGAAGAAGGCCCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAATAGCTAATGCAGCAAGTTATTTttt---ccattgctatttattt---------ttcc-atttccagttGCTCTA--TGCTGGATTGTAACATTTAGGGATTGGGGAGTACAATGCCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----CTGCATCTTTACTTTTTAAAGAGGAAAAAGAAAGAACATATGCCATAGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACAATATCTTTGCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTCTTCCCTGTAAGTTTGATCATTTTAGTTGAAAATGTTAAGAC--TATCTCCTGTACTCAAATACTCGT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTGTATTCTAAGCTCTTATTTTC----TCTCTTTCTTTTCTCTCAACAAACTCAACT-----TAACTATCATGTAATTTAACTTTAGACTCCATCCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATACTGCGGGAATGGAGCTGCTCAATTTTC---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTTTGATGACACATCCGTAGCAACAGTCGTTTTATTTATAAGCAAAGGGAAGAAGAAACGTGGACTTTGGCTAACCCGGGTGGATGAAGAACACCCAGAATGTAATTGCAGTTATGTCCACTTGTGGTGACATGGTCCAAGGTTGATCAGGATTTCCAAAGGA----ATCTG-----TGAGAGGAAATCTACCCGTGATCACAAC-CATAATGAAACAAACTGATGTGGAAATTTCTGTT-CTT----TAAAACCTACTTTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181029196 967 + 184069350 CTACGAGTCCAGCATGTCCA-GAGTATTGTTGGAGTGGCTATTGTCATTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGAAGGCCCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTCT---CCCTCGCTATTTATTT---------TTCC-ATTTCCAGTTGCTCTT--TGCTGGATTGTAACATTTAGGCACTGGGGAGTACAATCCCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----CAGCGTCTTTACTTTTTAAAGAGGAAAAAGAAAGAACATATGCCGTGGCCTGT-----------GAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTTTTCCCTGTAAGCCTGATCATTTTAGTTGAAAATATTTAGAC--TATCTCCTGTACTCAAATACTCAT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTAGCTTCTAAGCTCCTATTT--------GCTTTCTTTTCTCTCAACAAACTCAACT----------ATCATGTAATTTAACTTTAGACTCCAACCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATGCTGTAGGAATGGAGCTGCTCAATTTTT---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTTGGATGACACATCCGTAGCAACAGTCGTTTTATTTATAAGTAAAGAGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCACAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAACGTTTATCAGGATTTCCAAAGGA----ATCTG-----GGGCAGGAAATCTACCAGTGATCACAACACATAATGAAACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTATTTTAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186366376 967 + 189454096 CTACGAGTCCAGCATGTCCA-GAGTATTGTTGGAGTGGCTATTGTCATTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGAAGGCCCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTCT---CCCTCGCTATTTATTT---------TTCC-ATTTCCAGTTGCTCTA--TGCTGGATTGTAACATTTAGGCACTGGGGAGTACAATCCCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----CAGCGTCTTTACTTTTTAAAGAGGAAAAAGAAAGAACATATGCCGTGGCCTGT-----------GAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTTTTCCCTGTAAGCCTGATCATTTTAGTTGAAAATATTTAGAC--TATCTCCTGTACTCAAATACTCAT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTAGCTTCTAAGCTCCTATTT--------GCTTTCTTTTCTCTCAACAAACTCAACT----------ATCATGTAATTTAACTTTAGACTCCAACCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATGCTGTAGGAACGGAGCTGCTCAATTTTT---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTTGGATGACACATCCGTAGCAACAGTCGTTTTATTTATAAGTAAAGAGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAACGTTTATCAGGATTTCCAAAGGA----ATCTG-----GGGCAGGAAATCTACCAGTGATCACAACACATAATGAAACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTACTTTAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175981671 967 + 178775436 CTATGAGTCCAGCATGTCCA-GAGTATTGTTGGAGTGGCTATTGTCATTGGGTATCCTGAAT-TTTCTTcctagaaagga----agaagaaggccCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTCT---CCCTcgctatttattt---------ttcc-atttccagtTGCTCTA--TGCTGGATTGTAACATTTAGGCACTGGGGAGTACAATCCCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----TGGcatctttactttttaaagaggaaaaagaaagaacatatgCTGTGATCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACaatatctttccttccttcctgctccttGATGTAGTGAAAGGTTTTCCCTGTAAGTCTGATCATTTTAGTTGAAAATATTTAGAC--TATCTCCTGTACTCAAATACTCAT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTAGCTTCTAagctcctgttt--------tctttcttttctctcaacaAACTCAACT----------ATCATGTAATTTAACTTTAGACTCCAACCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATGCTGTAGGAATGGAGCTGCTCAATTTTC---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTTGGATGACACATCCGTAGCAACAGTCGTTTTATTTATAAgtaaagagaagaagaaacatgGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAAGGTTTATCAGGATTTCCAAAGGA----ATCTG-----TGGCAGGAAATCTACCAGTGATCACAACACATAATGAGACAAACTGATGTGgaaatttctatt-ctt----taaaacctattttaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132824482 967 + 135778131 CTATGAGTCCAGCATGTCCA-GAGTATTGTTGGAGTGACTATTGTCATTGGGTATCCTGAAT-TTTCTTCCTAGAAAGGA----AGAAGAAGGCCCCCATTTAGTTTTGATGCAGG-------TTTCAAATTCTTCTCTGGGAGAAAAGCTAATGCAGCAAGTTATTTTCT---CCCTCGCTATTTATTT---------TTCC-ATTTCCAGTTGCTCTA--TGCTGGCTTGTAACATTTAGGCACTGGGGAGTACAATCCCTTCAGAATAATCAGTCATAAACATTCCAGGTTTAGTTAACCATTA-----AGGAAAG-----CGGCATCTTTACTTTTTAAAGAGGAAAAAGAAAGAACATATGCCGTGGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACGTTGGAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAGGTTTTCCCTGTAAGTCTGATCATTTTAGTTGAAAATATTTAGAC--TATCTCCTGTACTCAAATACTCAT-CACAATAGAATTCCACAGTGTAAGGGCTTGGTAGCTTCTAAGCTCCTATTT--------TCTTTCTTTTCTCTCAACAAACTCAACT----------ATCATGTAATTTAACTTTAGACTCCAACCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATATGCTGTAGGAATGGAGCTGCTCAGTTTTC---------ACTGGGTTGCATT-TTTTATGGTTGTTCCTTTACTTCCTGGTAGCATATTTTGGATGACACATCCGTAGCAACAGTCGCTTTATTTATAAGTAAAGAGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTATGTCCACTTGTGGTGATATGGTCCAAGGTTTATCAGGATTTCCAAAGGA----ATCTG-----TGGCAGGAAATCTACCAGTGAGCACAACACATAATGAGACAAACTGATGTGGAAATTTCTATT-CTT----TAAAACCTATTTTAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188205448 963 - 190850796 CCATGAGTCCAGCGTGTCCA-GAGTATTGCTGGAGTGGCTACTGTCATTGGGTAGCCTCTAC-TAGCATACTAGAAAGGA----GGAAGAAGGCCCCCGTTTAGTTCTGATGCAAG-------TTTCCAA---TTCTCTGGGAGAACAGCTAAAGCAGCAGGTTCTTTTTT---CCCTGGGTATTTACTT---------CCCC-ATTTCCAGTTGCTCTG--TGCTGGACTGTCACATTTAGG-------GAGCACAATCCCTTCGGAATAAGCAGTCGTAAACATGCCATGCTTAGTTAACCATTAAAGTGAGGAAAG-----CAGTGTCTTTACTTTTTAAAGAGGAAAAAGAAAGACCACATGCCATGGCCTGT-----------AAAAGACTTTCCCATGTTTTGTTTACGCTGGAATTTCAAACGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAGAGGTTTTCCCTGTAAGTTTGATCATTTTAGTTGAAAATATTTAGAC--TATCTCATGTACTCAAATACTTGT-CACAGTAGAATTCCACAGTGTAAGGGCTTGGTAGCTTCTAAGCTGCTATTTTC----TTTCTTTCTTTTCTCTCAACAAACTCAACT----------ATCATATAATTTAACTTTAGACTCCAGCCCACATTCCTGCAGGAAATCTTCTTTTAAACAGAATTATACACTGCAGGAATAGAGCAGCTCAGTGCTC---------CCTGGGTTGCATT-TTTTATGGTTGTGCCCTTACTTCCTGGTAGCATATTTTTGATGACACATCCATAGCAACAGT---TTTATTTATAAATAAAGTGAAGAAGAAACATGGACTTTGGCTAACCTGGGTGTACAAAGAACACCCAGAATGTAATTGTAATTACGTCCACTTGTGGTGATACGGTCCAAGGTTTATCAGGATTTCCAAAGGA----ATTTG-----TGGGTGGAAATCCACCAGTGATCACAACACATAATGAAACGAACCGATGTGGAAATTTCTATT-CTT----TAACCCCTATTTTAA i calJac3.chr3 I 109 C 0 s mm10.chr8 84695333 988 - 129401213 CTCTGCGTGAAGAATCTATGTGAGTATTGCTGCTATGACTGTTGTCAGTGAACATCCTAGATGTTCCTTCCT---CAGAA----GGAAGAAAGCCCCTTCCCTCTCTTGATGCCGATGAAGATTTTTTAAGTCCTCTTTGGAAGGAAAG-TCACACACCAAGTGATTTCTTTCCCCTTTTCTGTTAATCTCAGCTCTCACTCA-GTTGCCAGCTCCTGGACTTGCTAGACTGTAGCATTTAAAGACctctaagtagcgtcccttctgaatccccaggcagaagcgttgtatgtttagttaaccttta-----aagaaaggaattccatataccCAGCATTTCCAGGGAGAAAAGAAGG---TCATGCCAGGGTCTCT-----------GCAAGCTTTTCCCA-AATCTGTTTACACTGGAAACTGACAATAT-CCGATATCTTTCCTTCCTTCCTGCTGTGTGAGGTACTGAAAAGCATCCCCTGT-AGTTTGAGCATTTAAACTTAAACTATTTATAC--TGCCTCATGTATACAA-CACTCTT-CCCTAACAAGTCCCACGG---AAGGGCCTGATACCCTCTAAACTGTTTTCTACACTGCCCCCTCCTTTT-----------CTTAAAT----------ATCTTATAATTTAACTTAAAAAT-CATTCCGCATTGCTTCAGGAAGTCTTCTTTTAAACATGATTATATACTTTGAGAATGGAGATGCTCTTTTTTTTTTTTTTAAACTAAGTTTTAGTATGTAATGGTTGTTCCTCTTCTTCCTGGTTGCATATTTTTGGTGACACATCCATAGCAAC-GTGGCTCTATTTATAAGCAAACAGAAGGAGAAACATGGACTTTGGCTAACCTGGGTGGACAAAGCACACCCTGAATGCAATCGTAATTGTGCCCAC-AATGGGGACGCGCTCCAAAGTCGATTGGATTTTCCACATAATCTGTTCTG-----TGGGAGGAAATTCATCAGCTGCCACAACACATCATGATTTGAAC-----TGGatattttaatt-cataaaataaaatttaatttaa i mm10.chr8 C 0 I 254 s canFam3.chr16 15700085 991 - 59632846 CTATGAGTCCAGAATCTTCC-AAGTATTGTC---ATGGCTATTGTCA-TGAACATCCTGGAT-TTTCTTTGTAGGAAGCAAATGAGAGAAAATTCGTCATTTAATTCTGATGCAGA-------CTTCAAA---TTTTCTGGGACTAAAGCTAATGTAGCAAGTTCATTTTC---CCCCGGCAATTGTTTT---------TCCCTGTTCCTAGTTACTCCA--TGCTGGATTGTAACATGTAAGGATCACTGAGTAAAATCCTTTCAGTATAACTAGTCATAAACATTCCATGTTTTGTTAACTCTCA-----AAGTAAGGAAA-CAACA-CACTAGTTTTTAAA----CTAAGAAAACACTATATGCCATGGCCTCTCGAGGCCTCTAAAACGACTTTTCCATGTTTTGTTTGCACTGAAATTTCAAAAGCTGACAATATCTTTCCTTCCTTCCTGCTCCTTGATGTAGTGAAAAGCTTCCCATGTAAGTCTGATCTTTTCAGTTGGACAGATTTGTACAGTCTCTCATGTACGCAAACACTCTTGTGCAACAGAATTCTACAGTGTAAGGGCTTGTGAGTTCCTAAACTGTTATTT-----------TTTTTCTCTCTCGATAAACTTAACTTGTCTTAACTATCATATAATTTAACTTTATGATCCATTCCACATTCCTGCAGGAAATCTTCTTTTAAACATGATTATATACTTCGAGAATGGAGCTGCTAATTTTTC---------CCTGAATTGCATT-TTTTATGGTTGTTCCCCTACTTCCTGGTAGCATATTTTGGATGACACATCCATAGCAACAGTAGCTTTGTTTATGAGTAAACTGAAGAAGAAACATGGACTTTGGTTTGCCTGGGCATACAAAGTGCATCTAGACTGCAATTGTAATTATGTCCACTGGTGGTGATGTGGGCCAGAGTTTATCAGCATTTCCAAAGAA----ACCTGTTCTCTGGGAGGAAATCTATCAGACACTTCAATGCAAAATGAAACAAGCTGGTGTGGAAATTTCCATTGTTT----TAAAATATCTTTTAA i canFam3.chr16 C 0 C 0 a score=42135.000000 s hg38.chr4_KI270785v1_alt 17026 13 + 119912 ATTTAGTGTTTAC s panTro4.chr4 190289588 13 + 193495092 ATTTAGTGTTTAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255090 13 + 198332218 ATTTAGTGTTTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227146 13 + 115148730 ATTTAGTGTTTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030163 13 + 184069350 ATTTAGTGTTTAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367343 13 + 189454096 ATTTAGTGTTTAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175982638 13 + 178775436 atttAGTGTTTAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825449 13 + 135778131 ATTTAGTGTTTAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188206411 12 - 190850796 ATTTGGTG-GTAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15701076 13 - 59632846 ATTTAGTGTTTAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84696321 254 - 129401213 I a score=66297.000000 s hg38.chr4_KI270785v1_alt 17039 21 + 119912 AAATAGGTATAAGTTAGCAAG s panTro4.chr4 190289601 21 + 193495092 AAATAGGTATAAGTTAGCAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255103 21 + 198332218 AAATAGGTATAAGTTAGCAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227159 21 + 115148730 AAATAGGTATAAGTTAGCAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030176 21 + 184069350 AAATAGGTATAAGTGAGCAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367356 21 + 189454096 AAATAGGTATAAGTGAGCAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175982651 21 + 178775436 AAATAGGTATAAGTGAGCAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825462 21 + 135778131 AAATAGGCATAAGTGAGCAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188206423 17 - 190850796 AAATAGGTATA----AGCAAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84696575 20 - 129401213 AAATAAGTGAAAATTAG-AAT i mm10.chr8 I 254 C 0 s canFam3.chr16 15701089 21 - 59632846 AAATATGTGTAAGTTGGAGag i canFam3.chr16 C 0 I 3216 a score=183640.000000 s hg38.chr4_KI270785v1_alt 17060 54 + 119912 AGTGCTGAACTCAGGGGACGATCTAAATCCACTCAATAATTAGTTCAACAAACT s panTro4.chr4 190289622 54 + 193495092 AGTGCTGAACTCAGGGGATGATCTAAATCCACTCAATAATTAGTTCAACAAACC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255124 54 + 198332218 AGTGCTGAACTCAGGGGACGATCTAGATCCACTCAATAATTAGTTCAACAAACC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227180 54 + 115148730 AGTGCTGAACTCAGGGGACGATCTAAATCCACTCAATAATTAGTTCAACAAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030197 54 + 184069350 AGTGCTGAACTCAGGGTACGATATAAATCCACTCAATAATTAGTTCAACAAACC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367377 54 + 189454096 AGTGCTGAACTCAGGGTACGATCTAAATCCACTCAATAATTAGTTCAACAAACC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175982672 54 + 178775436 AGTGCTGAACTCAGGGTACGATCTAACTCCACTCAATAATTAGTTCAACAaacc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825483 54 + 135778131 AGTGCTGAACTCAGGGTACGATCTAAATCCACTCAATAATTAGTTCAACAAACC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188206440 52 - 190850796 AGTGCTGAACTCAGG--ACCATCCGAATCCACTCAGTAATGAGttcaacaaact i calJac3.chr3 C 0 I 1900 s mm10.chr8 84696595 54 - 129401213 AAGGTTGAGTTCTGTAGACGATCTGAGTCAACTCACTAATCAGTTCAACAGATT i mm10.chr8 C 0 C 0 e canFam3.chr16 15701110 3216 - 59632846 I a score=35320.000000 s hg38.chr4_KI270785v1_alt 17114 12 + 119912 TAggctaggcac s panTro4.chr4 190289676 12 + 193495092 TAggccgggcac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255178 12 + 198332218 TAggctgggcac i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227234 12 + 115148730 TAggctgggcac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030251 12 + 184069350 TAggctgggcac i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367431 12 + 189454096 TAggctgggcac i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175982726 12 + 178775436 taggctgggcac i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825537 12 + 135778131 TAggctgggcac i chlSab2.chr7 C 0 C 0 s mm10.chr8 84696649 12 - 129401213 TATACTGGGGAC i mm10.chr8 C 0 I 2076 e canFam3.chr16 15701110 3216 - 59632846 I e calJac3.chr3 188206492 1900 - 190850796 I a score=657597.000000 s hg38.chr4_KI270785v1_alt 17126 308 + 119912 agtggctcacgcctgtagtcccagcactttgggaggccgaggagggtggatcacctgaggtcaggagctcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatataaaattatccgggcatggtggtgcacacctgtagtccaagctactcaggaggctgaggcaggaaaatcacttgaactcaggaggtggaggttggggtgagccgagatcatgccattgcactccagcctgggcaacaagagtgaaactccatctcagaaTAATaataaaaaataaataaataaatgaataa s panTro4.chr4 190289688 303 + 193495092 agtggctcacgcctgtagtcccagcactttgggaggcggaggagggtggatcacctgaggtcaggagctcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatataaaattatccgggcagggtggtgcgcacctgtagtccaagctactcaggaggctgaggcaggaaaatcacttgaactcaggaggtggaggttggggtgagccgagatcatgctatttcactccagcctgggcaacaagagtgaaactccatctcaaaataataataattaataaataaataa-----taa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255190 297 + 198332218 agtggctcacgcctgcagtcccagcactttgggaggccgaggagggcagatcacctgaggtcaggagctcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaacataaaattattcaggcatggtggtgcgcacctgtagtcccagctactcaggaggctgaggcaggaaaatcacttgaactcaggaggtggaagttggggtgagccaagatcacgccattgcactccagcctgggcaacaagagggaaactccatctcaaaataataataataa------taataa-----taG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227246 290 + 115148730 agtggctcacacctgtaaccccagcactttgggaggccgaggagggcagatcacctgaggtcaggagttcgagaccaacctgaccaacatggagaaaccccgtgtctactaaaaatataaaattatccaggcgtggtggtgcgcacctgtagtcccagctacttgggaggctgaggcaggaaaatcacttgaactcaggaggcggaggttgtggtgagccgagattgcaccattgcactgcagcctgggcaacaagaggaaaactccatctcaaa--aaTAATAAT-----------TAA-----TAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030263 297 + 184069350 agtggctcacgcctgtagtcccagcactttgggaggcctaggagggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatataaaattatccgggtgtggtggtgggcacctgtaaacccagctgctagggagactgaggcaggaaaatcacttgaattcaggaggcagaggttgtggtgagccgagattgcaccattacactccagcctaggcaacaaaagtgaaactccatctcaaaaaaataataaata------aataaa-----taa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367443 297 + 189454096 agtggctcacgcctgtaatcccagcactttgggaggcctaggagggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatataaaattatccgggtgtggtggtgtgcacctgtaaacccagctgctagggagactgaggcaggaaaatcacttgaattcaggaggcagaggttgtggtgagccgagattgcaccattacactccagcctaggcaacaaaagtgaaactccatctcaaaaaaataataaata------aataaa-----taa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175982738 297 + 178775436 agtggctcacgcctgtaatcccagcactttgggaggcctaggagggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaatcctgtctctactaaaaatataaaattatccgggtgtggtagtgtgcacctgttatcccagctgctagggagactgaggcaggaaaatcacttgaattcaggagacagaggttgcagtgagccgagatcgcaccattacactccagcctaggcaacaaaagtgaaactccatctcaaaaaaataataaata------aataaa-----taa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825549 293 + 135778131 agtggctcacacctataatcccagcactttgggagacctaggagggcagatcacctgaggtcaggagttccagaccagcctgaccaacatggagaaaccctgtctctactaaaaatataaaattatccgggtgtggtagtgtgcacctgtaatcccagctgctagggagactgaggcaggaaaatcacttgaactcaggaggcagaggttgtggtgagccgagatcgcaccattacactccagcctaggcaacaaaagtgaaactccatctcaaaaaaa----aaaaa------aaTGAA-----TAA i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15701110 3216 - 59632846 I e mm10.chr8 84696661 2076 - 129401213 I e calJac3.chr3 188206492 1900 - 190850796 I a score=179753.000000 s hg38.chr4_KI270785v1_alt 17434 68 + 119912 ataaataCAGTCATGGGACCCAACATTACAGACTTTAGTCATTGACGTTACAGAATTGAGCCACTCAT s panTro4.chr4 190289991 68 + 193495092 ataaataCGGTCATGGGACCCAACATTACAGACTTTAGTCACTGACGTTACAGAATTGAGCCACTCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255487 68 + 198332218 ATAAATACGGTCATGGGACCCAATGTTGCAGACTTCAGTTATTGACGTTACAGAATTGAGCCACTCAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227536 68 + 115148730 ATAAATACCGTCATGGGACCCAACATCACAGACTTTAGTCACTGACATTACAGAGTTGAGCCACTCAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030560 68 + 184069350 aCACATACGGTCATGGGACACAACGTCACAGACTTTAGACTCTGACGTTACAGAGTTGAGACACTCAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367740 68 + 189454096 aCACATACGGTCATGGGACACAACGTCACAGACTTTAGACTCTGACGTTACAGAGTTGAGACACTCAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175983035 68 + 178775436 acacatacgGTCATGGGACACAACATCACAGACTTTAGACTCTGACGTTACAGAGTTGAGACACTCAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825842 68 + 135778131 ACACATACAGTCATGGGACACAACGTCACAGACTTTAGACTCTGACATTACAGAGTTGAGACACTCAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188208392 68 - 190850796 ATAATTAAAGCAATGGAACCCAACGTTACAGACTTTAGATACTGACAGTACAGAGTTGAGACACTCAT i calJac3.chr3 I 1900 C 0 e canFam3.chr16 15701110 3216 - 59632846 I e mm10.chr8 84696661 2076 - 129401213 I a score=1962965.000000 s hg38.chr4_KI270785v1_alt 17502 651 + 119912 AGACAGGGACATCACAGAGTTTAGAAGAAACAGAGAAGTGGGAGGGGACAGAGTCAGCAGATGTGCCTCAAGCAGA---GGGTTCGGGGG-------------------------------------------AGTGTCGGATGAGAAAGAAGA---------------------------GCTGG-------------AAAAAAATGTTAAGAAGGAGTAGCTGGAGATGTTACAAGAAAATAAGGGGTGCTTATCATCATAGAAGCCAATAAGATAATTTG-AAAA----------ATATAGCGGTTACAAGAGTCAAATGCTAAACGGTTCCGAATGCGTGAGGGTTGGGATCAGGACTGGCGATTAGCAAGTTTTATGTGGCTTTTAAGCCATTACTTTCTGTAGAAAGAGAAGAGCACA-GCCAGAGGATAGAATTGAATGGGAAGTAAAGATGAAGT-A-AAATGAGCGTAGAGTG-TA--TTTTTTCTCGACAATTA-------TTGGTGTATGGAAGCATGTAGATAAATAGTTCCCTG---AAAATATCGTTTACAGGGGTGCTTTTATTTCTTTGGATGAG--------GAAACTACAGTACATTATAGGACAAGTGAAAGGAGCAAGTAGAGAAACAGGGTAATGATGACTTTAGGGAAAGATAAAGAGGGGTCTCAACAGTTCAGAAGGAGCAAGTCTCGGAAAAGAAGAGGGACAGTTGTGTCTGTTTCACTTATGCATTGTCATATGACAAATATCCT s panTro4.chr4 190290059 624 + 193495092 AGACAGGGACATCACAGAGTTTAGAAGAAACAGAGAAGTGGGAGGGGACAGAGTCAGCAGATGTG------------------------------------------------------------------------TCGGATGAGAAAGAAGA---------------------------GCTGG-------------AAAAAAATGTTAAGAAGGAGTAGCTGGAGATGTTACAAGAAAATAAGGGGTGCTTATCATCATAGAAGCCAATAAGAGAATTTG-AAAA----------ATATAGCGGTTACAAGAGTCAAATGCTAAACGGTTCCGAATGCGTGAGGGTTGGG-TCAGGACTGGCGATTAGCAAGTTTTAAGTGGCTTTTAAGCCATTACTTTCTGTAGAAAGATAAGACCACA-GCCAGAGGATAGAATTGAATGGGAAGTAAAGATGAAGT-A-AAATGAGTGTAGAGTG-TA--TTTTTTCTCGACAATTA-------TCGGTGTATGGAAGCATGTAGATAAATAGTTCCCTG---AAAATATTGTTTACAGGGGTGCATTTATTTCTTTGGATGAG--------GAAACTACAGTACATTATAGGACAAGTGAAAGGAGCAAGTAGAGAAACAGAGTGATGATGACTTTAGAGAAAGATAAAGAGGGGTCTCCACAGTTCAGAAGGAGCAAGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTCACTTGTGCATTGTCATATGACAAATATCCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195255555 650 + 198332218 AGACAAGGACATCACAGAGTTTAGAATAGACAGAGAAGAGGGAGGGGAC--AGTCAGCAGATGTGCATCAAGCAGT---GGGTTTGGGGG-------------------------------------------AGTGTCAGATGAGAAAGAAGA---------------------------GCTGGA------------AAAAAAATGTTAAGAAGGAGTAGCCGGAGATGTTACAAGAAAATAAGGGGTGCTTATCATCATAGAAGCCAATAAGAGAATTTG-AAAA----------ATATAGCGGTTACAAGAGTCAAATGCTAAACAGTTCCGAATGCATGAGGGTTGGGATCCGGACTGGCGGTTAGCAAGTTTTATGTGACTTTTAAGCCATTACTTTCTGTAGAAAGATAAGAGCACA-GCCAGAGGATAGAATTGAATGGGAAGTAAAGATGAAGT-A-AAATGAGTGTAGATTG-TA--TTTTTTCTCGACAGTTG-------TTGGTGTATGGAAGCATGTAGATAAATAGTTCCCTG---AAAATATTGTTTACAGGGGTGCTTTTATTTCTTCAGATGAA--------GAAACTACAGTACATTATAGGACAAGTGAAAGGAGCAAGTAGGGAAACAGGGTGATGATGACTTTAGAGAAAGATAAAGAGGGGTCTCAACAGTTCAGAAGAAGCAAGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTCAGTTATGCATTGTCATATGACAAATATCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111227604 639 + 115148730 AGACACGGACATCACAGAGTTCAGAATAAATAGAGAAGTGGGAGGGGACACAGTCAGCAGATGTGCCTCAAGCAGA---GGGTTCGGGGG--------------------------------------------GTGTCGGATGAGAAAGAAGA---------------------------GCTGG--------------AAAAAATGTT---AAGGAGTAGCCGGAGATGTTACAAGAAAATAAGGGGTTCTTATCATCATAGAAGCCAGTAAGAGAATTTG-AAAA----------ATACAGTGGTTACAAGAGTCAAATGCTAAACACTTGCGAATGCATGAGGATTGGGATCAGGACTGGCAGTTAGCAAGTTTTAAGTGGCTTTTAAGACATTACTTTCTGTAGAAAGATAAGAGCACA-GCCAGAGGATAGAATTGAATGGGAGGTAAAGATGAAGT-A-AAATGAGTGTAGATTG-TA--TTTTTTCTCGACAATTG-------TTGGTGTATGGAAGCATGTAGGTAAATAGTTCCCTG---AAAATATTGTTTACAGGGGGGCTTTTATTTCTTTGGATGAG--------GAATCTATAGTACATTATATGACAAGTGAAAGGAGCAAGTAGAGAAACAGGG---TGATGACTTTAGAGAA----AAAGAGGGGTCTCAACAGTTCAGAAGAAGCAAGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTCAGTTATGCATTGCCGTATAACAAATATCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181030628 650 + 184069350 AGACACAGACATCGCAGAGTTTagaataaatagagaagtgtgaggggacagagtcagcagatgtgcctcaagcgga---gggttcggggg--------------------------------------------gtttcggatgagaaagaaga---------------------------gctgg--------------aaaaaatgttaagaaggagtagccagagatgttacaagaaaataaggggtgcttatcatcatagaagccaataagagaatttg-aaac----------atatagcggttactagagtcaaatgctcaacacttgcgaatgcatgaggattgagatcaggactggcgatgagcaagttttaagtggcttgtaagccattactttctgtagaaagataagagcaca-gccagaggatagaagtgaatggaaagtaaagatgaagt-a-aaatgagtgtagattg-tattttttttcttgacaatcg-------ttggtgaatggaagcatgtagataaatagttccctg---aaaatattgtttaaagggggacttttatttctgtggatgag--------gaaactacagcacattataggacaagtgaaaggagcaagtagagaAACAGGGTGAGGGTGACTTTAGAGAAAGATAAAGAGAGGTCTCAACAGGTCAGAAGCAGC-AGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTCAGTTATGCACTGCCATGTAACAAACATCCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186367808 650 + 189454096 AGACACAGACATCGCAGAGTTTAGAATAAATAGAGAAGTGTGAGGGGACAGAGTCAGCAGATGTGCCTCAAGCGGA---GGGTTCGGGGG--------------------------------------------GTTTCGGATGAGAAAGAAGA---------------------------GCTGG--------------AAAAAATGTTAAGAAGGAGTAGCCAGAGATGTTACAAGAAAATAAGGGGTGCTTATCATCATAGAAGCCAATAAGAGAATTTG-AAAC----------ATATAGCGGTTACTAGAGTCAAATGCTCAACACTTGCGAATGCATGAGGATTGAGATCAGGACTGGCGATGAGCAAGTTTTAAGTGGCTTGTAAGCCATTACTTTCTGTAGAAAGATAAGAGCACA-GCCAGAGGATAGAAGTGAATGGAAAGTAAAGATGAAGT-A-AAATGAGTGTAGATTG-TATTTTTTTTCTTGACAATCG-------TTGGTGAATGGAAGCATGTAGATAAATAGTTCCCTG---AAAATATTGTTTAAAGGGGGACTTTTATTTCTGTGGATGAG--------GAAACTACAGCACATTATAGGACAAGTGAAAGGAGCAAGTAGAGAAACAGGGTGAGGGTGACTTTAGAGAAAGATAAAGAGAGGTCTCAACAGGTCAGAAGCAGC-AGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTCAGTTATGCACTGCCATGTAACAAACATCCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175983103 650 + 178775436 AGACACAGACATCGCAGAGTTTAGAATAAATAGAGAAGCGGGAGGGGACAGAGTCAGCAGATGTGCCTCAAGCAGA---GGGTTCGGGGG--------------------------------------------GTTTCGGATGAGAAAGAAGA---------------------------gctgg--------------aaaaaatgttaagaaggaGTAGCCAGAGATGTTACAAGAAAATAAGGGGTGATTATCATCATAGAAGCCAATAAGACAATTTG-AAAC----------ATATAGCGGTTACTAGAGTCAAATGCTCAACACTTGTGAATGCATGAGGATTGAGATCATGACTGGCGATGAGCAAGTTTTAAGTGGCTTGTAAGCCATTACTTTCTGTAGAAAGATAAGAGCACA-GCCGGAGGATAGAAGTGAATGGAAAGTAAAGATGAAGT-A-AAATGAGTgtagattg-tattttttttcttgacaatCG-------TTGGTGTATGGAAGCATGTAGATAAATAGTTCCctg---aaaatattgtttaaagggggacttttatttctgtggatgAG--------GAAACTACAGCACATTATAGGACAAGTGAAAGGAGCAAGTAGAGAAACAGGGTGAGGGTGACTttagagaaagataaagagaggTCTCAACAGGTCAGAAGAAGC-AGCTTCGGAAAAGAAGAGGGACAGTTATGTCTGTTTTAGTTATGCACTGCCATGTAACAAACATCCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132825910 653 + 135778131 AGACACAGACATCGCAGAGTTTGGAATAAATAGAGAAGTGGGAGAGGACAGAGTCAGCAGATGTGCCTCAAGCGGAGGGGGGTTCGGGGG--------------------------------------------GTTTCGGATGAGAAAGAAGA---------------------------GCTGG--------------GAAAAAGGTTAAGAAGGAGTAGCCAGAGATGTTACAAGAAAATAAGGGGTGCTTATCATCATAGAAGCCAATAAGAGAATTTG-AAAC----------ATATAGCGGTGACTACAGTCAAATGCTCAACACTTGCGAATGCGTGAGGATTGAGATCAGGACTGGCGATGAGCAAGTTTTAAGTGGCTTGTAAGCCATTACTTTCTGTAGAAAGATAAGAGCACA-GCCGGAGGATAGAAGTGATTGGAAAGTAAAGATGAAGT-A-AAATGAGTGTAGATTG-TATTTTTTTTCTTGACAATCG-------TTGGTGTATGGAAACACGTAGACAAATAGTTCCCTG---AAAATATTGTTTAAAGGGGGACTTTTATTTCTGTGGATGAG--------GAAACTACAGCACATTATAGGACAAGTGAAAGGAGCAAGTAGAGAAACAGGGTGAGGGTGACTTTAGAGAAAGATAAAGAGAGGTCTCAACAGGTCAGAAGAAGC-AGCTTTGGAAAAGAAGAGGAACAGTTATGTCTGTTTCAGTTATGCACTGCCATGTAACAAACATCCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188208460 724 - 190850796 CGATACGGACTTTGAAGCGTTTAG----GATAGAGAAGTGGGAGGGGACAGAGTCAGCAGATACGCCTCAAGGGGA---GGGTTGGGGGGTGCTGGATGAGAAAGAAGATGTGCCTCAAGGGGAGGGTTGGGGGGTGCTGGATGAGAAAGAAGATGTGCCTCAAGGGGAGGGTTGGGGGGTGCTGGATGAGAAAGAACTGGAAAAATGTTGAGGAGGAGTAGCCAGAGATGTTACAAGAAAATAAGAGATGCTTATCATTGTAGAAGCCAGTAAGAGAATCCGAAAAA----------ATATAACCGTTACTGGAGTCAAATGCTAAACATTTCCGAATGCATGAGGATTGAGATCAGGACTGGCGATGAACAAGTTTTAAGTGGCTTTTAAGCCATTACTTTCTGTAGAAAGGTAAGAGCACAGGCTTGACGATAGAACTGAATAGAAAGTAAAGATGATGTAA-AAATGGATGTGGATTGTTA--TTTTTCCTGGGCCATTG-------TTGGTGTATGGAAGCAAGTAGATAAATAGTTTCTTG---CAAATATTGTTT--GGGGGGCTTCTTGTTTCTTTGGATGAG--------GAAACTACAGGACATTATAGGACAAGTGAAAGGAGCAAGCAGAGAAAC--GGTGATGATGACTTTAGAGAAAGAC--AGAGGGGTCTCAACAGTTCAGAAGAAGC----TTTGGAAAAGAAGAGGTACTGTTCTGTCCGTTTCAGTTGGGCGTTGCTGTATAACAAATATCCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15704326 655 - 59632846 aggcacgaacgttatagaatatagaataaaaagagaagggggagaggg-aaagacagcagatatgcccaaataaga---aggtcaggtgg-------------------------------------------------------gaaaggtga---------------------------gccag--------------tgaaaccattgagaaggaagagccagaggagtttcaaagaaacaagggatcctgatgatcatggaagccaggggaagagtttg-aaaaaAATATATATATACAATGGTTATC--AGTCAAATACTAAATGGTTCCAAATGCAGGAGGAATGGGGCCAGGACTCAGGATTAGCACATTTTAAGTGACTTTTCAGATATTGCTTCCTGTGGAAAGATAAGGCCATTCACTGGAAGACAGAATCGAATGGAAGGTAAAGATGAAGC-AGAAATACGCGTATGTTG-TA---TTGTTTTTGACAGCTGCTTGTGACTTGTGTGTGGAAGCACACTCATTGACAGTCTCTTGGGCATATTATTGTTTCAAAAGGGGCTTTT-TTGTTTTGGATGATAACATTGCAAGACTGCAGCACATCCTGAGACAAGTGGTAGGAGTCCGTAGAGAGACA-----ATGTTGACTCCTAAGAAAGATGAAGAGAGGTCTCAACAGCCCAGAAGTG---AGCTTTGGAAAGGAAGAAGGTCATTTATTTCtgtgtcagttatgcatggctgtgtaacaaacctcct i canFam3.chr16 I 3216 C 0 e mm10.chr8 84696661 2076 - 129401213 I a score=451645.000000 s hg38.chr4_KI270785v1_alt 18153 168 + 119912 CAGAAACTTGGAGGCATGGCCGGACGCTGTGGTTCATAGTTTATAGGTGCACAGTGAc-tataatcccagcactttgggaggccaaggcagggggattgcttgagcccacgagtttgagaccagtgtgggtaacatggcgaaacactgtctctacaaaaaaaaa---aaaaa s panTro4.chr4 190290683 168 + 193495092 CAGAAACTTGGAGGCATGGCCGGACGCTGTGGTTCATAGTTTATAGGTGCACAGTGAc-tataatcccagcactttgggaggccaaggcaggaggattgcttgagcccaggagtttgagaccagtgtaggtaacatggcgaaacactgtctctacaaaaaaaaa---aaaaa i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195256205 166 + 198332218 CAGAAACATGGAGGCATGGCCGGACGCTGTGGTTCATAGTTTATATGTGCACAGTGAc-tataatcccagcactttgggaggccaaggcaggaggattgcttgagcccaggaatttgagaccagtgtgggtaacacggtgaaacactgtctctacaaaaaaaaa---aaa-- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111228243 170 + 115148730 GAGAAACGTGGAGGCGTGGCCGGACGCTGTGGCTCATAGTTTATAGGTGCACAGTGAc-tataatcccagcacctcgggaggcc-aggcaggaggattgcttgagcccaggaatttgagaccagtgtaggaaacacagcgaaacactgtctttacaaaaaaaaatgcaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181031278 170 + 184069350 CAGGAACGTGGAGGTGTGGCCGGACGCCGTGGCTCATAGTTTACAGGTGCACAGTGAc-tatcatcccagtgctttgggaggccaaagcaggaggattgcttgagcccaggaatttgagaccagtgtgggtagcgcggcgaaacagtgtctctac-aaaaaaaataaaaaaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186368458 170 + 189454096 CAGGAACGTGGAGGTGTGGCCGGACGCCGTGGCTCATAGTTTACAGGTGCACAGTGAc-tatcatcccagtgctttgggaggccaaagcaggaggattgcttgagcccaggaatttgagaccagtgtgggtagcgcggcgaaacagtgtctctac-aaaaaaaataaaaaaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175983753 171 + 178775436 CAGGAACGTGGAGGTGTGGCCGGACGCCGTGGCTCATAGTTTACAGGTGCACAGTGAC-Tatcatcccagtgctttgggaggccaaagcaggaggattgcttgagcccaggaatttgagaccagtgtgggtagcgcggcaaaacactgtctctacaaaaaaaaatacaaaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132826563 171 + 135778131 CAGAAACGTGGAGGCGTGGCCGGACGCTGTGGCTCATACTTTACAGGTGCACAGTGAc-tatcatcccagtgctttgggaggccaaagtaggaggattgcttgagcccaggaatttgagaccagtgtgggtagcacggcgaaacactgtctctacaaaaaaaaatacaaaaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188209184 167 - 190850796 CAGAAATG-AGAGGCATCACTGGACAATGTGGCTCACAGTTTACAGGC-TACGGTGActtgtaatcccagcactgtgggaggccaaggcaggaggattgcttgagtccaggaatttgagaccagtctgggcaacatgatgaaacactgactctacaaaagaaaacaaaa--- i calJac3.chr3 C 0 I 390 e canFam3.chr16 15704981 0 - 59632846 C e mm10.chr8 84696661 2076 - 129401213 I a score=482933.000000 s hg38.chr4_KI270785v1_alt 18321 165 + 119912 ttagttggatatgggagcacatgcctgtagtcccagctgcttgaggggctgaggcaggaggattgtttgagcctgggagctctaggctgcagtgagctgtgttcacgccagtgcactctagcctgggtgacaaagtgagac-ctgtctcaaaacaaaaCAGAAGCC s panTro4.chr4 190290852 165 + 193495092 ttagtcggatatgggagcacatgcctgtagtcccagctgcttgaggggctgaggcaggaggattgtttgagcctgggagctctaggctgcagtgagctgtgctcacgccagtgcactctagcctgggtgacaaagtgagac-ctgtctcaaaacaaaaCAGAAGCC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195256371 162 + 198332218 ttagtcggatatgggagcacatgcctgtagtcccagctgcttgaggggctgaggcaggaggattgtttgagcctgggagctctaggctgcagtgagctgtgttcataccagtgcactctagcctgggtgacaaagtgagac----tctcaaaacaaaaCAGAAGCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111228413 166 + 115148730 ttagtcggacatgggagcacgtgcctgtagtcccagctgcttgaggggctgaggcaggaggattgtttgagcctgggaggtctaggctgcagtgagctgtgttcaagccagtgcactctagcctgggtgacaaagtgagaccctgtctcaaaacaaaacaaaaGCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181031448 166 + 184069350 ttagtcggacatgggagcgcctgcctgtagtcccagctactccaggggctgaggcaggaggactgtttgagcctgggaggtctaggctacagtaagctgtgttcacatcagtgcagtctagcctgggtgacaaagtgagaccctgtctcaaaacaaaacaaaaGCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186368628 166 + 189454096 ttagtcggacatgggagcacctgcctgtagtcccagctactccaggggctgaggcaggaggactgtttgagcctgggaggtctaggctacagtaagctgtgttcacatcagtgcagtctagcctgggtgacaaagtgagaccctgtctcaaaacaaaacaaaaGCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175983924 166 + 178775436 ttagtcggacatgggagcacctgcctgtagtcccagctactccaggggctgaggcaggaggactgtttgagcctgggaggtctaggctgcagtaagctgtgttcaCATCagtgcagtctagcctgggtgacaaagtgagaccctgtctcaaaacaaaacaaaagcc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132826734 166 + 135778131 ttagtcggacatgggagcagctgcctgtagtcccagttactccaggggctgaggcaggaggactgtttgagcctgggaggtctaggctgcagtaagctgtgttcacatcagtgcactctaacctgggtgacaaagtgagaccctgtctcaaaacaaaacaaaaGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188209741 162 - 190850796 tcaggcaggcatgggggcaggtgcctgtagtcccagctgcttgaagcgctgaggcaggagga----ttgagcctgggaggtgtaggctgcagtgagctgtattcaccccagtgcactctagtctgggtgacaaagtgagtccccatttcaaaacaaaacaaaaCCC i calJac3.chr3 I 390 C 0 e canFam3.chr16 15704981 0 - 59632846 C e mm10.chr8 84696661 2076 - 129401213 I a score=2034206.000000 s hg38.chr4_KI270785v1_alt 18486 686 + 119912 ccacaaaacttagaggcttaaa-caacaccattttattatttttcacagt----tctgtgtgttggctgcgctcccctgagatgtcttctctctgctctac-tcgtctcagctgagcacatctcgagtgg-cacagtttggagcagaggatctaaggtggttgg----tctgactccttgactgtgttagcttgggtggctgaaacgccgtggatgctctttcatcccgtagtgtgtctcttcccgtgtggcctttccagcagcatggcccagacctctc-acatggtggttcaagtgagagaaggct----gcagagtctcttaaggcctaggcactgagactcacg---catca---tttctgccatattcc-aagatcaagtgaaggtactctgcaggtcacagggcagggcagattcaataagaaagagaactagGAAAA-GCACAAAGATGTGGCCGCATAACACATTGGGGCCAGTTTGCAAGGATTTGCCAC--AATGCTTCTAGAACAAAAGAGAAGGAGAAAGGATTAGTGTAGATTTAGAACACTTCTGAATTAAGAGGAAGCAATTGGAGAAAGTTCAGGCTGAAAACCTTCAATTAGCATAGACTGAAAAAAGCTCATCTCTTAAAGGAGA---AGTCATAAAAGAGTTTATATGAATCAGAGTGTGATTCCTTTTTTTCTTATACAATATGAAATAAAACCA s panTro4.chr4 190291017 686 + 193495092 ccacaaaacttagaggcttaaa-caacaccattttattatttttcacagt----tctgtgtgttggctgcgctcccctgagatgtcttctctccgctctac-tcgtctcagctgagcacatctcgagtgg-tacagtttggagcagaggatctgaggtggttgg----tctgactcctggactgtgttagcttgggtggctgaaacgccgtggatgctctttcatcccgtagtgtgtctctgcccgcgtggcctttccagcaggatggcccagacctctc-acagggtggttcaagggagagaaggct----gcagggtctcttaaggcctaggcactgagactcaca---catca---tttctgccgtgttcc-aagatcaagtgaaggtactctgcaggtcacagggcagggcagattcaataaggaagagaactagGAAAA-GCACAAAGATGTGGCCACATAACACATTGGGGCCAGTTTGCAATGATTTGCCAC--AATGCTTCTAGAACAAAAGATAAGGAGAAAGGATTAGTGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTCAGGCTGAAAACCTTCAATTAGCATAGACTGAAAAAAGCTCATCTCTTAAAGGAGA---AGTCATAAAAGAGTTTATATGAATCAGAGTGTGATTCCTTTTTTTCTTATACAATATGAAATAAAACCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195256533 687 + 198332218 ccacaaaacttagaggcttaaa-caagaccattttattatttttcacaattgtgtgtgtgtgttggctgcgctcccctgaggtgtcttctctctgctctac-tcatctcagctgagcacatctcaagcgg-cacagtttggagcagaggatctaaggtggtcga----tctgactccttgactgtgttagcttgggtggctgaaacgctgtgggtgctctttcgtcccgtagtgcgtctcttcccgtggggccttt-cggcaggatggcccaaa-gtctt-acgtggtggttcaagggagagaaggct----gcagggtctcttaaggcctaggcactgagactcaca---cacca---tttctgccatattcc--agatcaaatgaaggtactctgcaggtcacagggcagggcagattcaatacggaagagaactagGAACA-GCACAAAGATGTGGCAGCATAACACATTGAGGCCAGTTTGCAATGATTTGCCAC--AATGCTTCTAGGACAAAAGAGAAGGAGAAAGGATTAGTGTAGATTTAGAACACTTCCGAAGTAAGAGGAAGCAACTGGAGAAAGTTTGGGCTGAAAACCTTCAATTAGCATAGACTGAAAAAAGCTCATCTCCTAAAGGAGT---AGTCATAAAGGAGTTTATATGAATCAGAGTGTGATTCCTTTTTTTCTTATACAATATAAAATAAAACCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111228579 689 + 115148730 ccacaaaacttagaggcttaca-taacaccattttattatttttcacaat----tctgtgtgttggctgcgctcccctgagacgtcttctctctgctctac-tcatctcagctgagcacatctcaggcgg-cacagtttggagcagaggatctaaggtggtcgg----tctgactccttgactgtgttagcttgggtggctgaaacgctgtggctgctctttcatcccgtagtgcgtctcttctcgtgtggcctttccagcaggatggcccaaacctctt-acatggtggttcaagggagagaaggct----gcagggtctcttaaggcctaggcactgagactcaca---catca---tttctgccatattcc-aagatccaatcaaggtactctgtaggtcacagggcagcgcagattcgatacagaagagaactagGAAAG-GCACACAGACGTGGCCGCATAACACGTTGGAGCCATTTTGCAATGATTTGCCAC--AGTGCTTCTAGGACAAAAGAGAAGGAGAAAGGATTAGTGTAGACTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTCGGGCTGAAAACCTTCAATTAGCATAGACTGAAAAAAGCTCATCTCTTAAAGGAGAAGTAGTCATAAAAGAGCTTATATGAATCAGAGTGTGATTTCTTTTTTCCTTATACAATATAAAATAAAACCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181031614 683 + 184069350 ccacaaaacttagacgcttaag-caacaccattttttcatttttcacaat----tctgcctgttgactgcactccactgagctgtcttctttctgctgtacgtcatctcagctgagcacatctcaagtgg-cactgtttggagcagaggatctaaggtg------------gactccttggctgtgttagcttggatggctgaaatgctgtggctgctctttcatcccttagtgtgtctcttcccgtgtggcctttccagcaggatggcccagacctctt-acatggtggttcaagggagagaaggct----gcagagtctcttaaggcctaggcaccgagactcaca---catca---tttctgccatagtcc-aagattgaatcaaggtactctgtaggtcacggggcagcgcagattcaataaggaagagagctCGGAAAAGGCACGGAGGCGTGGCCGCATAACACATTGGGGCCATTTTGCAGTGATTTGCCAC--AATGCTTCTAGGACAAAAGAGAAGGAGAAAGGATTAGTGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTGGGGCTGAAAGCCTTCAAGTAGTATAGACTGAATAAAGCTAGTCTTTTAAAGGAGAAGTAGTCATAAAAGAGTTTATAAGAACCAGACTGTGATTCCTTTTTTCCTTATACAATATAAAATAAAACCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186368794 683 + 189454096 ccacaaaacttagacgcttaag-caacaccattttttcatttttcacaat----tctgcctgttgactgcactcccctgagctgtcttctttctgctctacgtcatctcagctgagcacatctcaagtgg-cactgtttggagcagaggatctaaggtg------------gactccttggctgtgttagcttgaatggctgaaatgctgtggctgctctttcatcccttagtgtgtctcttcccgtgtggcctttccagcaggatggcccagacctctt-acatggtggttcaagggagagaaggct----gcagagtctcttaaggcctaggcaccgagactcaca---catca---tttctgccatagtcc-aagatcgaatcaaggtactctgtaggtcacggggcagcgcagattcaataaggaagagagctCGGAAAAGGCACGAAGGCGTGGCCGCATAACACATTGGGGCCATTTTGCAGTGATTTGCCAC--AATGCTTCTAGGACAAAAGAGAAGAAGAAAGGATTAGTGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTGGGGCTGAAAGCCTTCAAGTAGTATAGACTGAATAAAGCTAGTCTTTTAAAGGAGAAGTAGTCATAAAAGAGTTTATAAGAATCAGACTGTGATTCCTTTTTTCCTTATACAATATAAAATAAAACCA i macFas5.chr5 C 0 I 187 s papAnu2.chr5 175984090 683 + 178775436 ccaCAAAACTTAGACGCTTAAG-CAAcaccatttttttatttttcacaat----tctgcCTGTTGGCTGCACTCCCCTGAGCTGTCTTCTTTCTGCTCTATGTCATCTCAGCTGAGCACATCTCAAGTGG-CGCTGTTTGGAGCAGAGGATCTAAGGTG------------GACTCCTTGGCTGTGTTAGCTTAGATGGCTGAAATGCTGTGGCTGCTCTTTGATCCCTTAGTGTGTCTCTTCCCGTGTAGCCTTTCCAGCAGGATGGCCCAGACCTCTT-ACATGGTGGTTCAAGGGAGAGAAGGCT----GCAGAGTCTCTTAAGGCCTAGGCACCGAGACTCACA---CATCA---TTTCTGCCATAGTCC-AAGATCGAATCAAGGTACTCTGTAGGTCACGGGGCAGTGCGGATTCAATAAGGAAGAGAGCTCGGAAAAGGCACGAAGGCGTGGCCGCATAACACATTGGGGCCATTTTGCAGTGATTTGCCAC--AGTGCTTCTAGgacaaaagagaaggagaaaggattAGTGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTGAGGCTGAAAGCCTCCAAGTAGTATAGACTGAATAAAGCTAGTCTCTTAAAGGAGAAGTAGTCATAAAAGAGTTTATAAGAATCAGACTGTGATTCCTTTTTTCcttatacaatataaaataaaacca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132826900 683 + 135778131 ccacaaaacttagacgcttaag-caacaccattttattatttttcacaat----tctgtctgttggccgcactcccctgagctgtcttctttctgctctacgtcatctcagctgagcacatctcaagtgg-cactgtttggagcagaggatctaagggg------------cactccttggctgtgttagcttggatggctgaaatgctgtggctgctctttcatcccttagtgtgtctcctcccatgtggcctttccagcaggatggcccagacctctt-acatggtggttcaagggagagaaggct----gcagagtctcttaaggcctaggcaccgagactcaca---catca---tttctgccatagtcc-aagatcaaatcaaggtgctctgtaggtcacagggcagcgcagattcaataagaaagagagctagGAAATGGCACGAAGACGTGGCCGCATAACACATTGGGGCCATTTTGCAGTGATTTGCCAC--AATGCGTCTAGGACAAAAGAGAAGGAGAAAGGATTAGTGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACTGGAGAAAGTTGAGGCTGAAAGCCTTCAAGTAGTATAGACTGAATAAAGCTAGTCTCTTAAAGGAGAAGTAGTCACAAAAGAGTTTATAAGAATCAGACTGTGATACCTTTTTTCCTTATACAATATAAAATAAAACCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188209903 676 - 190850796 ccacaaaacttagaggcttaaa-caacatcattttattatttttcaaaat----tctgtgtgctggctgggctcc-ctaaggtgtcttctctttgctctgtgtcaccttggctgagtacatttcaagtggccacagtttgcacctgaggatctaaggtcgtcta----cctgactcgtcgactctgttagcttggatggctgaaacactgtggctgctctctcatcttctagtgcctgtcttcccatgtggcctttccagcaggatggcccagaactcct-acatggtggctcaagggagaaaagg-------------ctcttgaggcctagacactgaaactcaca---caacattgttgctgccatattcc-aagatgaaatcaaggtgctctgtacgtcacaggacagcacagattcaatacggaagagaactagGTAAAGGCACAAAGACGTGGCTGCATAACACATTGCGGCCATTTTGCAGTGATTCCCCAC--AGTGCTTCTAGAACCAAA---AAGGAGAAAGGATTAATGTAGATTTAGAACACTTCTGAAGTAAGAGGAAGCAACAGGAG-AAGTTCAGGTTGAAAACCTCCAATTACCGTAGACTGGAAAGAGCTCATCTCTTAAAGAAGT---AGTCATATAAGGGCTTATATGAATCAG--TGTGATTCCTTTTTTTCTTACACAATACAAAATAAAACCA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15704981 662 - 59632846 ccaagaggtttagaggcataaagcaacaccgctctagaacttgtcacCAG-----------------------------AGGTGGCTCCTCCCTGCTCCAG-GCATCTCAGCTGGGCCAACTTGAAGTGGCCCCAGTTTGCACGAGAG--TCCAAATTATCTGGCCCCTCTGCCTCCCCGCCC---TTGGCTTGGAT-GCTGAGACGCCTGGGCCTCCCTTTGCTCAACCAGGACCTCTCTTTCACTG--GCCTTTCCAGCAGGATAGTCCACGCTTTTTGACAGGGTGGCTCAGGGAAGGGAATGCTGGAAGTAAGGCCTTTGAGGGTCCAGGCACTGAAATTCACACGGCATCA---CTGCTGTCATGTTCTTCAGGTCAGTGCAAAGGATTC--CAGATGACATAGCAGCTGAGGTCCAGTGTGGGGGAGGAT--GGCACAAGGGCATAAACTCAGATGCACGAGAGCTTCGGGCCGCCTTACGATAGCTTACCACTTCCTGCTTCTAAGACAAAAGGAAAAGAGAGAGGATTGGTGAAGGTAGAGCACA-TTTTGAAGT--GAGGAGGGAATCTGAAGTAGTTCATGTTGAAAAGCTTTATTCAGTGGAGGCTGAGAGAAGCTTGCCTCTT-AAGGAGAAGCAGTCATGAAGGCGTTTCTATGAGTCAGAATGGGATTCTTTTTTTCCTTCTAAAATTTCTTATAAA---- i canFam3.chr16 C 0 C 0 e mm10.chr8 84696661 2076 - 129401213 I a score=3321.000000 s hg38.chr4_KI270785v1_alt 19172 1 + 119912 C s panTro4.chr4 190291703 1 + 193495092 C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195257220 1 + 198332218 C i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111229268 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181032297 1 + 184069350 C i rheMac3.chr5 C 0 I 195 s macFas5.chr5 186369664 1 + 189454096 c i macFas5.chr5 I 187 C 0 s papAnu2.chr5 175984773 1 + 178775436 t i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132827583 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188210579 1 - 190850796 C i calJac3.chr3 C 0 C 0 s canFam3.chr16 15705643 1 - 59632846 C i canFam3.chr16 C 0 C 0 e mm10.chr8 84696661 2076 - 129401213 I a score=15757.000000 s hg38.chr4_KI270785v1_alt 19173 8 + 119912 TCTGTAAC s panTro4.chr4 190291704 8 + 193495092 TCTGTAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195257221 8 + 198332218 TCTGGAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111229269 8 + 115148730 TCTGGAAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186369665 8 + 189454096 ccTGGAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175984774 8 + 178775436 gctGGAAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132827584 8 + 135778131 GCTGGAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188210580 8 - 190850796 TCTGGAAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15705644 8 - 59632846 CCTGGGGT i canFam3.chr16 C 0 C 0 e mm10.chr8 84696661 2076 - 129401213 I e rheMac3.chr5 181032298 195 + 184069350 I a score=2073634.000000 s hg38.chr4_KI270785v1_alt 19181 608 + 119912 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCTGA-TTTTAAAAGAAAT---TTT-AATT-TTTTTGAATAAAATATTTTAAAAATGCATATGTCACTTGCCTCTTCATATTTAATGCACTTTTAGCAAAACTCAtgttatgaactgagaagggtctgatgttttactcaaattgcaagctaacaaattagtttgctatgat--------tgctggaagaagacatgagacttctgtatcaaagacaaaggattttattattcatagcaatagtagtattcagaatataagca--ctcttgggccag-tt-ccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatacagtgggttgtgttagaaaagaggaagttgaccttgggaaacctgaatcttttgtaattggcacttggcatgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagcatgcatgtatatgtctcttgttgtggagggagatactatctttgtctttcaaggctgtaagcaattttatccattggtccagaaggagatcctatcactgtcttccca-------tgctatacaaggcctcctt s panTro4.chr4 190291712 608 + 193495092 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCTGa-ttttaaaagaaat---ttt-aatt-tttttgaataaaatattttaaaaatGCATATGTCACTTGCATCTTCATATTTAATGCACTTTTAGCAAAACTCAtgttatgaactgagaagggtctgatgttttactcaaattgcaagctaacaaattagtttgctatgat--------tgctggaagaagacatgagacttctgtatcaaagacaaaggattttattattcatagcaatagtagtattcagaatataagca--ctcttgggccag-tt-ccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatacggtgggttgtgttagaaaagaggaagttgaccttgggaaacctgaatcttttgtaattggcagttggcatgcttgctgtttgctaggaaggaaatgtcatttttattatactgtacagcatgcacgtatatgtctcttgttgtggagggagatactatctttgtctttcaaggctgtaagcaaatttatcctttggtccagaaggagatcctatcactgtcttccca-------tgctacaccaggcctcctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195257229 604 + 198332218 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCTGa-ttttaaaagaaat---ttt-aatt-tttttgaatacaatattttaaaaatGCATATGTCACTTGCATCTTCATATTTAATGCACTTTTAGCAAAACtc-----atgaactgagaaggatctgatgttttactcaaattgcaagctaacaaattagtttgctatgat--------tgctggaagaagacatgagacttctgtatcaaagacaaaggattttattattcatagcaatagtagtattcagaatataagca--ctcttgggccag-ttcccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatacagtgggttgtgttagaaaagaggaagttgaccttgggaaacctgaatcttttgtaattggcacttggcatgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagtatgcatgtatatgtctcttgttgtggaaggagatactatctttgtctttcaaggctgtaagcaaatttatcctttggtccagaaggagatcctaccactgtctcccca-------tgctgtacaaggcatcctt i ponAbe2.chr4 C 0 I 590 s nomLeu3.chr7b 111229277 608 + 115148730 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCTGA-TTTTAAAAGAAAT---TTTAAATG-TTTTTGAATAAAATATTTTAAAAatgcatatgtcatttgcatcttcatatttaatgcaCTTTTAGCAAAACAC--gttatgaactgagaagggtctgatgttttactcaaattgcaagctaacaaattagtttgctatgat--------tgctggaagaagacatgagacttctgtatcaaagacaaaggattttattattcatagcaatagtagtattcagaatataagca--ctcttgggccag-ttcccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatatattgggctgtgttagaaaagaggaggttgacctagggaaacctgaatcttttgtaattggcacttggcatgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagcatgcatgtatatgtctcttgttgtggagggagatactatctttgtctttcaagcctgtaagcaaatttatcctttggtccagaaggagatcctatcactatcttccca-------tgctacacaaggcagtctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181032493 612 + 184069350 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCCGa-ttttaaaagaaat---ttt-aattatttttgaatacaatattttaaaaatGCATATGTCCTTTGCATCTTCATATTTAATGTACTTTTAGCAAAACTCAtgttataaactgtgaagggtctgatattttactcaaattgcaagctaacaaattagtttgctataat--------tgctagaagaagacatgagacttctgtatcaaagacaaaggattttattattcacagcaatagtagtattcagaatataagcactctcttgggccag-ttcccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatatagtgagttgtgttagaaaagaggcagttgaccttgggaaacctgaatcttttgtaattggcacttggcgtgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagcatgcatgtatatgtctcttgttgtggagggagatactatctatgtctttcaaggctgtaagcaaatttattctttggtccagaaggagatcctatcactatcttcccg-------tgctatacaaggcatcctt i rheMac3.chr5 I 195 C 0 s macFas5.chr5 186369673 612 + 189454096 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCCGA-TTTTAAAAGAAAT---TTT-AATTATTTTTGAATACAATATTTTTAAAATGCATATGTCCTTTGCATCTTCATATTTAATGTACTTTTAGCAAAACTCAtgttataaactgtgaagggtctgatattttactcaaattgcaagctaacaaattagtttgctataat--------tgctagaagaagacatgagacttctgtatcaaagacaaaggattttattattcacagcaatagtagtattcagaatataagcactctcttgggccag-ttcccccagccctaatccac-caaggcaatgagaaggtgaccaagtgacatctgaacatatagtgagttgtgttagaaaagaggcagttgaccttgggaaacctgactcttttgtaattgtcacttggcgtgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagcatgcatgtatatgtctcttgttgtggagggagatactatctatgtctttcaaggatgtaagcaaatttattctttggtccagaaggagatcctatcactatcttcccg-------tgctatacaaggcatcctt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175984782 612 + 178775436 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGagcctaa-ttttaaaagaaat---ttt-agttatttttgaatacaatattttaaaaatgcatatgtcCTTTGCATCTTCATATTTAATGTACTTTTAGCAAAACTCATGTTATGAACTGTGAAGGGTCTGATACTTTACTCAAATTGCAAGCTAACAAATTAGTTTGCTGTAAT--------TGCTGGAAGAAGACATGAGACTTCTGTATCAAAGACAAAGGATTTTATTATTCACAGCAATAGTAGTATTCAGAATATAAGCACTCTCTTCGGCCAG-TTCCCCCAGCCCTAATCCAC-CAACGCAATGAGAAGGTGACCAAGTGACATCTGAACATATAGTGGGTTGTGTTAGAAAAGAGGCAGTTCACCTTGGGAAACCTGAATCTTTTGTAATTGGCACTTGGCATGCTTGCTATTTGCTAGGAaggaaatgtcatttttattatactgtacagcatgtgtgtatatgtctctTGTTGTGGAGGGAGATACTATCTATATCTTTCAAGGCTGTAAGCAAATTTATTATTTGGTCCAGAAGGAGATCCTATCACTATCTTCCCG-------TGCTATACAAGGCATCCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132827592 612 + 135778131 TCTTGAATAAATCTGCTGTTAGGGAATGCAGCATGCT----ATGAGCCTGA-TTTTAAAAGAAAT---TTT-AATTATTTTTGAATACAATATTTTAAAAATGCATATGTCCTTCGCATCTTCATATTTAATGTACTTTTAGCAAAACTCAtgttatgaactgtgaagggtctgatactttactcaaattgcaagctaacaaattagtttgctataat--------tgctggaagaagacatgagacttctgtatcaaagacaaaggattttattattcacagcaatagtagtattcagaatataagcactctcttgggccag-ttcccccagccctaatccac-caacgcaatgagaaggtgaccaagtgacatctgaacatatagtgggttgtgttagaaaagaggaagttgaccttgggaaacctgaatcttttgtaattggcacttggcatgcttgctatttgctaggaaggaaatgtcatttttattatactgtacagcatacgtgtatatgtctcttgttgtggagggagatactatctatgtctttcaaggctgtaagcaaatttattctttggtccagaaggagatcctatcactatcttcccg-------tgctatacaaggcatcctt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188210588 619 - 190850796 TCTTGAATAAATCTGCTGTGAGGGAATGCAGCATGCT----ATCA-TCTGA-TTTTAAAAGAAAT---TTT-ATTTTTCTTTGAATAAAACATTTTAAAAATTCCTATGTCATTTGCATCTTCATATTTAATGCACTTTTAGCAAAATTAATGTTTTGCactgtgaagggtctgatattttactcgactggcaagctaacaaattagtttgctttgat--------tgctggaagaagacatgaggcttctgtatcaaagacaaaaggttttattattcacagcaatggtagtatccagaatgtaagcactctcttgggccggattcccccagccctaatccac-caaggcaatgagaaggtaaccaagtgacatctgaacatatatggggttgtgttagaagagaggaagttgaccttgggaaacctgaatcttttgaaactggcacttggcatgcttgctatttgctaggaaggaaatgtcgttttcagtatactgtacagcatgcatgtatatgtctcttgttgtggagggagatactatctttgtttttcaaggctgtaagcaaatgtatcctttgctctgaaagtagatactatcactgtcttcccatgctgtttgctatacaagatatcctt i calJac3.chr3 C 0 C 0 s canFam3.chr16 15705652 628 - 59632846 TCTGAAATAAAGCTGATGTTAGGGGACGCAGCATGATTAAAAAGAACCTCAGTTTTAACAAAAATCCCTCC-TTTTTCTTTTGAGTCAAGTATTCTTGAAATGCAAA--CCATTTGCACCTTCA----TAATGTGATACTAGCAAAAATAAtggcaagaggtgtggacggtctgagattttactgaaattgcaagctaaagagttggagtgccacagtttcatggatgcttgcagaagacacgagcctccagtgtcagagatgaaggactttcttccacatagccgtagcggtatccagaatatttgcatgctctcgggctgc-ttctctcagccctaagcctcacaggacactgtgaagaaggccaggtgacatctgaacacacagtgggttgtgtcagagtagagaagtctgactttagaaagcccgattctgttataattggccgtaggcatgcttcctctttttcagaaggaaataatcattttcattatactgtacagtaggcctg--cctgtcctctgttatgatgggagatactatttttatcttccaaagctgtaaggaagcttatcctctgctccagagagagaggctatctctatcttccaacactacttgttatataaggcatcctt i canFam3.chr16 C 0 C 0 e mm10.chr8 84696661 2076 - 129401213 I a score=1073803.000000 s hg38.chr4_KI270785v1_alt 19789 341 + 119912 gaaaagacagctgagagcaaagatagctagtgcttctgtttgtaagacatgcagaaatgtgagagacccacga---attgtctcccCAAAACTAATTTTAAAATATGACTTCAGTGTGCAAGAAATGGTCAAAATAAAAATCTAAATAAATTTCTACCATAAAGAAATATTTCAAAAA--------AACAAATATTTCATATGTAAGAGgtaatctcatatgtaatttcatatg-----------------taatcttcaGTACGTAAGTACTTAAAAATATTCTTCATTTTAAAAGTATTGTATGTTTACTTATATATTCAATGTAAGATCAACAAA------TTTTTCATGTAGGCAGTGAAAGTACAAACAA s panTro4.chr4 190292320 341 + 193495092 gaaaagatagctgagagcaaagacagctagtgcttctgtttgtaagacatgcagaaatgtgaaagacccatga---attgtctcccCAAAACTAATTTTAAAATATGACTTCAGTGTGCAAGAAATGGTCAAAATAAAAATCTAAATAAATTTCTACCATAAAGAAATATTTCAAAAA--------AACAAATATTTCATATGTAAGAGGTAATCTCCTATGTAATNTCATATG-----------------TAATCTTCAGTACATAAGTACTTAAAAATATTCTTTATTTTAAAAGTATTATATGTTTACTTATATATTCAATGTAAGATCAACACA------TTTTTCATGTAGGCAGTGAAAGTACAAACAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195258423 357 + 198332218 gaaaagatagccgagagcaaagacagctagtgcttctgtttgtacgacatgcagaaatgtgagagacccacga---attgtctcccCAAAACTAATTTTAAAATATGACTTCAATGTGCAAGAAATGATCAAAATAAAAATCTGAATAAATTTCTACCATAAAGAAATATTTCAAAAA--------AA-AAATATTTCATATGTAATAGgtaatctcatatgtaatttcatatgtaatcAAATTTCATATATAATCTTCAGTACATAAGTACTTAAAAATATTCTTTATTTTAAAAGTATTATATGTTTACTTATCTATTCAGTGTAAGATCAACACA------TTTTTCATGTAGGCAGTGAAAGTACAAACAA i ponAbe2.chr4 I 590 C 0 s nomLeu3.chr7b 111229885 358 + 115148730 gaaaagatagccgagagcaaagacagctagtgcttctgtttgtaagacatgcagaaatgtgagagaaccacga---attgtctcccCAAAACTAATTTAAAAATATGACTTCAATGTGCAAGAAATCGTCAAAATAAAAATCTAAATAAATTTCTACCGTAAAGAAATATTTCAAAAAC-------AACAAATATTTCATATGTAATAGGTAATCTGATATGTAATTTCATATGTAATCAAATTTCGTATGTAATCTTCAGTACATAAGTACTT-AAAATATTCTTTATTTTAAAAGTATTATATGTTTACTTATATATTCAATGTCAGATCAACAAA------TTTTTCATGTAGGCAGTGAAAGTACAAACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181033105 365 + 184069350 gaaaagatagccgagagcaaagacagctagtgcttctgcttgtaagacacacagaaatgtgagaggcccatga---attgcctcccCAAAACTAATTTTAAACTATGACTTCAATGTGCAAGAAATGGTCAAAATAAAAATCTAAATAAATTTTTACCGTAAGGAAATACTTCAAAAACAACAACAAAGAAATATTTCATATGTAATAGGTAATATCATATGTAATTTCCTAGGTAATCAAATTTCATATGTAATCTTCAGTACATAAGTACTT-AAAATATTCTTTATTTTAAAAGTATGGTATGTTTACTGATATATTCAATGTAAGATCAACAAA------TTTTTCATGTAGGTGGTGAAATTACAAACAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186370285 365 + 189454096 gaaaagatagccgagagcaaaggcagctagtgcttctgcttgtaagacacacagaaatgtgagagacccatga---attgcctcccCAAAACTAATTTTAAACTATGACTTCAATGTGCAAGAAATGGTCAAAATAAAAATCTAAATAAATTTTTACCGTAAAGAAATACTTCAAAAACAACAACAAAGAaatatttcatatgtaataggtaatatcatatgtaatttcctaggtaatcaactttcatatgtaatCTTCAGTACATAAGTACTT-AAAATATTCTTTATTTTAAAAGTATGGTATGTTTACTGATATATTCAATGTAAGATCAACAAA------TTTTTCATGTAGGTGGTGAAATTACAAACAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175985394 366 + 178775436 GAAAAGATAGCCGAGAGCAAAGACAGCTAGTGCTTCTGCTTGTAAGACACACAGAAATGTGAGAGACCCATGA---ATTGCCTCCCCAAAACTAATTTTAAACTATGACTTCAATGTGCAAGaaatggtcaaaataaaaatctaaataaatttttaccataaagaaatacttcaaaaacaacaacaaagaaatatttcatGTGTAATAGGTAATATCATATGTAATTTCCTAGGTAATCAAATTTCATATGTAATCTTCAGTACATAAgtacttaaaaatattctttattttaaaagtatggtaTGTTTACTGATGTATTCAATGTAAGATCAACACA------TTTTTCATGTAGGCGGTAAAATTACAAACGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132828204 366 + 135778131 gaaaagatagccgagagcaaagacagctagtgcttctctttgtaagacacacagaaatgtgagagacctatga---attgcctcccCAAAACTAATTTTAATCTATGACTTCAATGTGCAAGAAATGGTCAAAATAAAAATCTAAATAAATTTTTACCATAAAGAAATACTTCAAAAACAATGACAAAGAAATATTTCATGTGTAATAGGTAATATCATATGTAATTTCCTAGGTAATCAAATTTCATACGTAATCTTCAGTACATAAGGACTTAAAAATATTCTTTATTTTAAAAGTATGGTATGTTTACTGATATATTCAATGTAAGATCAACACA------TTTTTCATGTAGGCGGTGAAATTACAAACAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188211207 334 - 190850796 gaaaagatagcggagagcaaagacagccag------------------atgcagaaatgtg-gagacctgtga---attgtctcccaaAAGCTAATTTTAAAATATGACTTCAGTGCACAAGAATTGTTCAAAATAAAAATGGAAATAAATTTCTACCTTAGAGAAATATTTCAAAAACAACAAT-AAAAAATGTTTCATATGTAA-----------ATAGGTAATCTCATATGTAATCAGATTTCATATGTAATCTTCAGTACATAAGTACTT-AAAATATTCTTTATTTGAAAAGTATGATATGTTTATTTACATATTCAATGCAAGATCAACACA------TTTTTCATGTAGGCAGTGAAAGTACAAACAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15706280 292 - 59632846 gaaaagacagtccagagcaaaagcagccagtgcctctgtttgcaagacatgcagaaatgtgggagacatatggagcattgtctcccaacaATTACTTTTGAAATATTACTTCATGGTGCAAGAAATGGTCAAAA-GAAGATGTAAATAAATTTCTACCATGAGAAAATATTTCATGA--------------------------------------------------------------------------TAACCTTCAGTAAACTATTACTTAAAAATGTT----ATTTTAAGTTTATGGCATGTTTATTTATATGTCAAGTTTTATACCAACAGATTTTTTTTTTTCATGTAGGCAGTGAAAGTACAA---- i canFam3.chr16 C 0 I 496 e mm10.chr8 84696661 2076 - 129401213 I a score=1122541.000000 s hg38.chr4_KI270785v1_alt 20130 348 + 119912 ATAGGAGTAGTAAGCAGTTTGGAACACTGATTTCAGTGTTCAGCTCCTTGATCAAGTATTTGGTGAAATCACAACCACCAGGGTGTGGGTGCGCCTGTTGGGCAGCAGTGACAAATGGCCTTCCCTAGGATGG-CCTGTAGATGTGTCCTTGGCTTTGCTATCTGGACTATT-GCCCATCCCAGCGGCTTCCCTGTACCTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTATCTAGTTTTACAAATGTTCCAGAAAATTTGCTCCATCCCAGGATAAGCTGTGGACACATAGGTAGGATCATGATGTGGATTTATGTTTCAGATTTACCACAGAGTGGtgtg s panTro4.chr4 190292661 348 + 193495092 ATAGGAGTAGTAAGCAGTTTGGAACGCTGATTTCAGTGTTCAGCTCCTTGATCAAGTATTTGGTGAAATCACAACCACCAGGGTGTGGGTGCGCCTGTTGGGCAGCAGTGACAAATGGCCTTCCCTAGGATGG-CCTGTAGATGTGTCCTTGGCTTTGCTATCTGGACTGTT-GCCCATCCCAGCAGCTCCCCTGTACGTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTATCTAGTTTTACAAATGTTCCAGGAAATTTGCTCCATCCCAGGATAAGTTGTGGACACATAGGTAGGATCATGATGTGGATTTATGTTTCAGATTGACCACGGAGTGGtgtg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195258780 348 + 198332218 ATAGGAGCAGTAAGCAGTTTGGAACACTGATTTCAGTGTTCAGCTCCTTGACCAAGTATTTGGTGAAATCACAACCACCAGGGTGTGGGTGCGCCTGTTGGGCAGCAGTGACCAATGGCCTTCCCTAGGATGG-CCTGTGGATGTGTCCTTGGCTTTGCTGTCTGGACTATT-GCCCATCCCAGCGGCTTCCCTGTACCTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTATCTAGTTTTACAAATGTTCCAGGAAATTTGCTCCATCCCAGGATAAGCTGTGGACACATAGGTAGGATCATGATGTGGATTTATGTTTCAAATTTACCACGGAGTGGtgtg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111230243 347 + 115148730 ATAGGAGTGGTAAGCAGTTTGGAACACTGATTTCAATGTTCAGGTCCTTGACCAAGTGTTTGGTGAAATCACAACCAGCAGGGTGTGGGTGCGCCTGTTGGGCAGCAGTGACCAATGGCCTTCCCTAGGATGA-CCTGTAGATGTGTCCTTGGCTTTGCTATCTGGACTATT-GCCCATCCCAGCGGCTTCCCTGTACTTCTTATGAAACAACAGGAGCCTGTTAGGCTTCGGAGTTAATCCAGTTTTACAAATGTTCTGGGAAATTTGCTCCATCCCAGGATAAGCTGTGGACACATAGGTAGGATCATGATGC-GATTTATGTTTCAAATTTACCACAGAGTGGtgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181033470 345 + 184069350 AT---AGTAGTAAGCAGTTTGAAACACTGGTTTCGGTGTTCAGCTCCTTGACCTAGTGTTTGGGGAAATCACAACCACCAGGTTATGGGTGCGCCTGTTGGGCAGCAGTGACCAACAGCCTTCCCTAGGATGG-CCTGTGGCTGTGTCTTTGGCTTTGTTATCTGGAACGTT-GCCCATCCCAGTGACTTCCCTGTACCTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTTTCCAGTTTTACAAATGTTCCAGGAAATTTGCTCCATCCCAGAATAAGCTGTGGACACATAGGTAGGATCATGATGCAGATTTATGTTTCAGATTTACCACGGAGTGGtgtg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186370650 345 + 189454096 AT---AGTAGTAAGCAGTTTGAAACACTGGTTTCAGTGTTCAGCTCCTTGACCTAGTGTTTGGGGAAATCACAACCACCAGGTTATGGGTGCGCCTGTTGGGCAGCAGTGACCAACAGCCTTCCCTAGGATGG-CCTGTGGCTGTGTCTTTGGCTTTGTTATCTGGAACGTT-GCCCATCCCAGTGACTTCCCTGTACCTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTTTCCAGTTTTACAAATGTTCCAGGAAATTTGCTCCATCCCAGGATAAGCTGTGGACACATAGGTAGGATCATGATGCAGATTTATGTTTCAGATTTACCACGGAGTGGtgtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175985760 347 + 178775436 ATAGGAGTGGTAAGCAGTTTGGAACACTGGTTTCGGTGTTCAGCTCCTTGACCAAGTGTTTGGGGAAATCACAACCACCAGGTTA-GGGTGCGCCTGTTGGGCAGCAGTGACCAACAGCCTTCCCTAGGGTGG-CCTGTGGCTGTGTCTTTGGCCTTGTTATCTGGAACGTT-GCCCATCCCAGCGACTTCCCTGTACCTCTTACGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTTTCCAGTTTTACAAATGTTCCAGGAAATTTGCTCCATCCCAGGGTAAGCTGTGGACACATAGGTAGGATCGTGATGCGGATTTATGTTTCAGATTTACCACGGAGTGGTGTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132828570 348 + 135778131 ATAGGAGTGGTAAGCAGTTTGGAACACTGGTTTCGGTGTTCAGCTCCTTGACCAAGTGTTTGGGGAAATCACAACCACTAGGTTATGGGTGCACCTGTTGGGCAGCAGTGACCAACAGCCTTCCCTAGGGTGG-CCTGTGGATGTGTCTCTGGCTTTGTCATCTGGAACGTT-GCCTGTCCCAGCGACTTCCCTGTACCTCTTATGAAACAACAGGAGCCTGTTAGGCTTTGGAGTTTTTCCAGTTTTACAAATGGTCCAGGAAATTTGCTCCATCCCAGGATAAGCTGTGGACACAGAGGTCGGATCATGATGCGGATTTATGTTTCAGATTTACCACGGAGTGGtgtg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188211541 345 - 190850796 ATAG-AGTGGTAAGCAGGTTAGAACACTGATTTCAGTGTTCAGCTCCTTGACTGAGTATCTGCGGTAAGCACAGCCACCAGGCTAT-GGCGTGCCTGTCGGCCAGCAGTGACCAATGGCCTTCCTT-GGATGG-CCTGTCGATGTGTCTTTGTCTCTGTCACCTGGACTGTT-GCCCAACCCAGCACCTTCCCTGAACCTCTTATGAAACGACAGTGGCCTGTGAGGCTGTGGAGTACGTCCAAGTTTACAAATGTTCCGGGAAATTTGCTCCATCCCAGAATAAGCGGTGGGCACATAGGTAGGATCGCGACGTGGATTTATGTTTCAGATTCACCATGGAACGCtgtg i calJac3.chr3 C 0 C 0 s canFam3.chr16 15707068 346 - 59632846 ATAGAAGTCATAAGCAATTTGGAGCACCGATTTCAGTGTTTAGCAGCTTTACGGGATCTTAGGGGGAATCACAATCACCAGGGTATTGATGGGTCTATTTGGCATAGGTCTCTAATGGCCCTTCACGGGATGATCCTGTTCAGGCCTTCCTGGCTTTATGACCTGGATTCCCAGCTCATCTCAGGCACTTCCCTATACCTCTTATGGAACAGCTGGAACCAGTTAGGATCTAGAGCCTGTCCAGGCCTACAAATGCTCCAAGGGATTTGTTCTAGCCCAGTGTATGGGGTGAACACATAGGGATG----TGATGTGGATTTACATTTCAAATCTACAATAGGATGGTATG i canFam3.chr16 I 496 C 0 e mm10.chr8 84696661 2076 - 129401213 I a score=889907.000000 s hg38.chr4_KI270785v1_alt 20478 308 + 119912 ttagaccatttatgctgctgcgacagagtaccacagaatggataatttataaagaaaaaagattgatttgctgtatggttctggaggctgggaagtccatggtcaagaggctgc-----atctggtgagggccttcttgctgcatcataacatggtggaaagcatcacatggcaagcgagggtgcaagacagagataggaaatcattcaaactcatccttttatcaggagctcacttctatggtaacagcattaatccactcagggggacaggagcctcatgacgtaatcacctcttaaaggtcccacctctt s panTro4.chr4 190293009 308 + 193495092 ttaggccatttatgctgctgcgacagagtaccacagaatggataatttataaagaaaaaagattgatttgccgtatggttctggaggctgggaagtccatggttaagaggctgc-----atctggtgagggcctacttgctgcgtcataacatggtggaaagcatcacatggcaagcgagggtgcaagacagagagaggaaatcattcaaactcatccttttatcaggagctcacttctgtggtaacagcattaatccactggtggggacaggagcctcatgatgtaatcacctcttaaaggtcccacctctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259128 308 + 198332218 ttagaccatttatgctgctgcaactgagtaccacagaatggataatttttaaagaaaaaagattgatttgctgtatggttctggaggctgggaagtccattgtcaagaggctgc-----atctggtgagggccttcttgctgcatcataacgtggtggaaagcatcacatggcaagcgagggtgcaagacagagagaggaaaccgttcaaactcatccttttatcaggagctcacttctgtggtaacagcattaatccactcagggggacaggagcctcatgacgtaatcacctcttaaaggtcccacctctt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111230590 306 + 115148730 ttagaccacttcttctgctacaacagagtaccacagaatggataatttataaagaaaaaagattgatttgctgtatggttctggaggctgggaagtccacggtcaagaggctgc-----atctggtgagggccttcttgctgcatcataacatggtggaaagcatcacatggcaagcgagggtgcaagacagagagaggaaaccattcaaactcatccttttatcaggagctcacttctgtggtaacagcattaatccactc--ggggacaggagcctcatgacgtaatcacctcttaaaggtcccacctctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181033815 306 + 184069350 ttagaccatttctgctgctacaacagagtaccacagaatggataatttataaagaaaagagattgatttgctgtatggttctggaggctgggaagtccacggtcaggaggctgc-----atctggtgagggccttcttgctgcatcataacgtggtggaaagcatcacatggcaagcgagggtgcaagacagaggcaggaaaccatcc-aactcagcctcttatcaggagctcacttccgtggtaacagcattaatctgctcagggggacaggagcctcatgatgtaatcacctcttaac-gtcccacctctt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186370995 306 + 189454096 ttagaccatttctgctgctacaacagagtaccacagaatggataatttataaagaaaagagattgatttgctgtatggttctggaggctgggaagtccacggtcaggaggctgc-----atctggtgagggccttcttgctgcatcataacgtggtggaaagcatcacatggcaagcgagggtgcaagacagaggcaggaaaccatcc-aactcagcctcttatcaggagctcacttccgtggtaacagcattaatctgctcagggggacaggagcctcatgatgtaatcacctcttaac-gtcccacctctt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175986107 310 + 178775436 TTAGACCATTTCTGCTGCTACAACAGAGTACCACAgaatggataatttataaagaaaaaagattgatttgctgtatggttctggaggctgggaagtccacgGTCAGGAGGCTGCATCtgatctggtgagggccttcttgctggatCATAACATGGTAGAAAGCATCACATGGCAAGCGAGGGTGCAAGACAGAGGCAGGAAACCATCC-AACTCAGCCTCTTATCAGGAGCTCACTTCCGTGGTAACAGCATTAATCCGCTCAGGGGGACA-GAGCCTCATGATGTAATCACCTCTTAac-gtcccacctctt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132828918 306 + 135778131 ttagaccatttctgctgctacaacagagtaccacagaatggatactttataaagaaaaaagattgatttgctctatggttctggaggctgggaagtccatggtcaggaggctgc-----gtctggtgagggccttcttgctgcatcataacatggtggaaagcatcacatggcaagcgagggtgcaagacagaggcaggaaaccatcc-aactcagcctcttatcaggagctcacttccgtggtaatagcattaatccgctcacggggacaggagcctcatgatgtaatcacctcttaac-gtcccacctctt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188211886 301 - 190850796 ttggaccatttctgctgccacaacagagtaccacacaatggataatttat----ttaaaagactgatttgctgtatatttctggaggctgggaagtttatggtcaagaggctgc-----atctggtgggggctttcatgctgcatcataacgtggcggaaggcaccacatggcaagcgagggggctagactgag--aggaaaccatcc-acctcctccttttatcaggacctcatttccgtggcgacagcattaatccactccgggggacagaagcctcatgacctagtcacctctgaaatgtcccacctctt i calJac3.chr3 C 0 I 314 e canFam3.chr16 15707414 0 - 59632846 C e mm10.chr8 84696661 2076 - 129401213 I a score=182747.000000 s hg38.chr4_KI270785v1_alt 20786 64 + 119912 aataccatcacaatggcaattaaatttcaacatgagttttggagggggcattcaagccacagca s panTro4.chr4 190293317 64 + 193495092 aataccatcacaatggcaattaaatttcaacatgagttttggagggggcattcaagccacagca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259436 63 + 198332218 aaaaccatcacaatggcaattaaatttcaacatgagttttgga-ggggcattcaagccacagca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111230896 63 + 115148730 aataccatcacaatggcaattaaatttcaacatgag-tttggaggggacattcaagccacagca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034121 64 + 184069350 aataccatcacaataacaattacatttcaacatgagttttggaggggacattcaagccacagca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186371301 64 + 189454096 aataccatcacaataacaattacatttcaacatgagttttggaggggacattcaagccacagca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175986417 64 + 178775436 aataccatcacaataacaattacatttcaatgtgagttttggaggggacattcaagcCACAGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829224 64 + 135778131 aataccatcacaataacaattacagttcaatgtaagttttggaggggacattcaagccacagca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188212501 63 - 190850796 aataccatgacaatggtaattaaatttcaacatgagttctgga-gggacattcaagccacagca i calJac3.chr3 I 314 C 0 e canFam3.chr16 15707414 0 - 59632846 C e mm10.chr8 84696661 2076 - 129401213 I a score=30258.000000 s hg38.chr4_KI270785v1_alt 20850 9 + 119912 GATAGTATT s panTro4.chr4 190293381 9 + 193495092 GATAGTATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259499 9 + 198332218 GATAGTATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111230959 9 + 115148730 GATAGTATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034185 9 + 184069350 GATAGTATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186371365 9 + 189454096 GATAGTATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175986481 9 + 178775436 GATAGTATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829288 9 + 135778131 GATAGTATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188212564 9 - 190850796 GGTCGTCTG i calJac3.chr3 C 0 C 0 s mm10.chr8 84698737 9 - 129401213 GACAGTATG i mm10.chr8 I 2076 C 0 e canFam3.chr16 15707414 0 - 59632846 C a score=896751.000000 s hg38.chr4_KI270785v1_alt 20859 265 + 119912 GGTCTGATGCAGTCCCAAGTGTGATGGAATCTAGAGATCTCTTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTCTTGGTAAAGTTTGAGTACAATACATACTAATCATTGTGTAGCTGTCATATTTTTCTAACAACTTCAAAGACACCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTATTGTAGATTTAACTTTGCTCAATAGGTCCTTATGAGGGAGG--AGTGTCCATTCTGTATCACTGGT s panTro4.chr4 190293390 265 + 193495092 GGTCTGATGCAGTCCCAAGTGTGATGTAATCTAGAGATCTCTTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTCTTGGTAAAGTTTGAGTACAATACTTACTGATCATTGTGTAGCTGTCATATTTTTCTAACAACTTTAAAGACACCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTATTGTAGATTTAACTTTGCTCAATAGGTCCTTATGAGGGAGG--AGTGTCCATTCTGTATCACTGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259508 264 + 198332218 GGTCTGATGCAGTCCCAAGTGTGATGGAATCCAGAGATCTCTTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAAAATGC-TTTACTTCTTGGTAAAGTTTGAGTATGATACTTACTAATCATTGTGTAGTTGTCATATTTTTCTAACAACTTTAAAGACACCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTATTGTAGATTTAACTTTGCTCAATAGGTCCTTATGAGGGAGG--AGTGTCCAGTCTGTATCACTGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111230968 264 + 115148730 GGTCTGATGCAGTCCCAAGTGTGATGGAATCCAGAGATCTCTTCAAAGTAGGAG-AGGGAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTCTCGGTAAAGTTTGAGTACAATACTTACTAATCATTGTGTAGTTGTCGTATTTTTCTAACAACTTTAAAGACACCAAATCTAA-TTACCTGTAAGC-AGAGAGACACATCCTACTGTAGATTTAACTTCGCTCAATAGGTCCTTATGGGGGAGG--AGTGTCCATTCTGCGTCACTGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034194 265 + 184069350 TGTCTGATGCAGTCCCACGTGTGATGGAATCCAGAGATCTCCTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTATTGGTAAAGTTTGAATACAATACTTACTAATCATTGTGTAGTTGTCATCTTTTTCTAACAACTTTAAAGACATCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTACTTTAGATTTAACTTTGCTCAATAGGTCCTTACGAGGGAGG--AGTATCCGTTTTGTATCACTGGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186371374 265 + 189454096 TGTCTGATGCAGTCCCACGTGTGATGGAATCCAGAGATCTCCTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTATTGGTAAAGTTTGAGTACAATACTTACTAATCATTGTGTAGTTGCCATCTTTTTCTAACAACTTTAAAGACATCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTACTTTAGATTTAACTTTGCTCAATAGGTCCTTACGAGGGAGG--AGTATCCGTTTTGTATCACTGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175986490 265 + 178775436 TGTCTGATGCAGTCCCATGTGTAATGGAATCCAGAGATCTCCTCAAAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTATTGGTAAAGTTCGAGTACAATACTTACCAATCATTGTATAGTTGTCATCTTTTTCTAACAACTTTAAAGACATCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTACTTTAGATTTAACTTTGCTCAATAGGTCCTTACAAGGGAGG--AGTATCCGTTTTGTATCGCTGGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829297 265 + 135778131 CGTCTGATGCAGTCCCAAGTGTAATGGAATCCAGAGATCTCCTCACAGTAGGAG-AGGAAGTTTA-GAGTGTCCACAGAATGCTTTTGCTTATTGGTAAAGTTTGAGTACAATACTTACTAATCATTGTGTATTTGTCATATTTTTCTAACAACTTTAAAGACATCAAATCTAATTTACCTGTAAGC-AGAGAGACACATCCTACTTTAGATTTAACTTTGCTCAATAGGTCCTTATGAGGGAGG--AGTATCCATTTTATATCACTGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188212573 265 - 190850796 GGTCTGACGCAGTCCCAGCCGTGGTGGAATCCAGAGATCTCTTCAAAGGAGGAG-AGGAAATTTA-CAGTGTCCGCAGAACGCTTCTGCTTACTGGTACAGTTTGAGTACAATACTTACTAATCATTGTGCAGTTGTCATATTTTTCTAACGACTTTAAAGACACCAACTCTAATTTACCTGTAAGC-AGATAGACGCAGCCTATTACAGACTTAACTTTGCTCAGTACGTCCTTATGAGGGAGG--AGTGTCCATTCTGTGGCACTGGT i calJac3.chr3 C 0 C 0 s mm10.chr8 84698746 198 - 129401213 GGTTTGGTTCTGTCCCAAGTATGAAGGACT--------------GAAGCAGGAA-AAG------A-GAAACTCCG------GTCCTTCTTTATTGGAGACATCAGAGCATGAATGTTA--------------------GTATCTTT---------------ACACTGAGTATTCTCCATCTATAAGCAAGAGGCACACATCTTCTTGTCAGCTTAATTCTATTCAGCA-------ATGGAGGAGG--GTTGTTAGGTCTCTGTCCTGGGT i mm10.chr8 C 0 C 0 s canFam3.chr16 15707414 263 - 59632846 GGTGTGACGCAGTCCCAGGAATAATGGAGCCCAGAGATCTCTTTAAAGCAAGGGTCTGAAATTTATGAGTGCGCCTGGCATGCTTTCACTTATTGGTGAAGTTTGAGGACAATATTTGTTAAACATTACTTAGTTATA----TTTTCTAACAGTTTTACAGACACCAAACATATTTTATCTATAAAC-AGAT--ACTTACCCTTTTGCGTATTTAACTGTACTCAAGAGGTCATTATGGGGGGAGATATTGTTAATTCTGAATCACAGGT i canFam3.chr16 C 0 C 0 a score=161249.000000 s hg38.chr4_KI270785v1_alt 21124 50 + 119912 GAATAAGTGAGCATATGAAGATGAAACGATCCACAAggaaggcagggcat s panTro4.chr4 190293655 50 + 193495092 GAATAAGTGGGCATATGAAGATGAAACGATCCACAAGGAAGGCAGGGCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259772 50 + 198332218 GAATAAGTGGGCATATGAAGATGAGATGATCCACAAGGAAGGCGGGGCAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111231232 50 + 115148730 GAACAAGTGGGTGTATGAAGATGAGACAATCTGCAGggaaggcagggcat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034459 50 + 184069350 GAATAAGTGGACATATGAAAATGAGACGATCCGCAAGGAAGGCAGGGCAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186371639 50 + 189454096 GAATAAGTGGACATATGAAAATGAGACGATCCGCAAGGAAGGCAGGGCAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175986755 50 + 178775436 GAATAAGTGGACATATGAAAATGAGACGATCCGCAAGGAAGGCAGGGCAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829562 50 + 135778131 GAATAAGTGGACATATGAAAATGAGACGATCCGCAAGGAAGGCAGGGCAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188212838 50 - 190850796 GAATAAGTGGGCATCTGAAGATGAGGTGATGTGCCGGGAAGGCAGGGCAT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15707677 50 - 59632846 AAGTAAGTATGCACAGAAAGAAGCCACACTTAGCGAGGAAGACAGGGCAT i canFam3.chr16 C 0 C 0 e mm10.chr8 84698944 0 - 129401213 C a score=69558.000000 s hg38.chr4_KI270785v1_alt 21174 26 + 119912 ggaatggaatttattttattatattt s panTro4.chr4 190293705 26 + 193495092 GGAATGGAAtttattttattttattt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195259822 26 + 198332218 GGAATGGAATTTATTTTATTTTATTT i ponAbe2.chr4 C 0 M 970 s nomLeu3.chr7b 111231282 26 + 115148730 ggaatggaatttattttattttattt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034509 26 + 184069350 GGAATGGAATTAATTTAAttttattt i rheMac3.chr5 C 0 I 3 s macFas5.chr5 186371689 26 + 189454096 GGAATGGAATTAATTTAAttttattt i macFas5.chr5 C 0 I 3 s papAnu2.chr5 175986805 26 + 178775436 GGAAtggaattaatttaattttatta i papAnu2.chr5 C 0 I 3 s chlSab2.chr7 132829612 26 + 135778131 GGAATGGAATTAGTTTAAttttattt i chlSab2.chr7 C 0 I 3 s calJac3.chr3 188212888 25 - 190850796 GGAATGGAAtttattttattttatt- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15707727 0 - 59632846 C e mm10.chr8 84698944 0 - 129401213 C a score=562222.000000 s hg38.chr4_KI270785v1_alt 21200 254 + 119912 t-ttatttttttgagatggagtcttgctctgtca-ccaggctggagtgcagtggcatgatctgggctcattgcaacctctgcatcctgggttcaagcaattctcctgcctcagcctcccaagcagctgggactacaggcatgtgctatcatgcctggctaa-tttttttgtatttttagtagagacaaggtttcaccatgttg-gccaggctggtctcgaactcctgacctcaagtaatcctcctgcctcagtctccc s panTro4.chr4 190293731 254 + 193495092 t-ttatttttttgagatggagtcttgctctgtca-ccaggctggagttcagtggcatgatctgggctcactgcaacctctgcatcttgggttcaagcaattcttctgcctcagcctcccaagcagctgggactacaggcatgtgctatcatgcctggctaa-tttttttgtatttttagtagagacaaggtttcaccatgttg-gccaggctggtctcgaactcctgacctcaagtaatcctcctgcctcagtctccc i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111231308 254 + 115148730 t-ttatttttttgagatggagtcttgctctgtca-ccaggctggagtgcagtggcatgctctgggctcactgcaacctctgcctcctaggttcaagcaattctcctgcctcagcctcccaagcagctgggactacaggcatgtgctatcatgcctggctaa-tttttttgtatttttagtagagacaaggttttaccatgttg-gccaggctggtcttgaactcctgacctcaagtaatcctcctgcctccgtctccc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034538 254 + 184069350 t-tattttttttttaaaggagtcttgctctgtca-ccaggctggagtgcagtggcatgacctcagcacactgcaacctctgcctcctgggttcaagcaattctcctgcctcagccttccgagcagctgggaccacaggcatgtgccattacgcctggctaa-tttttttgtatttttagtagagaagacatttcaccatgttg-accaggctggtctcgaactcctgacctcaagtaatcctcctgcctcagtctcct i rheMac3.chr5 I 3 C 0 s macFas5.chr5 186371718 254 + 189454096 t-tattttttttttaaaggagtcttgctctgtca-ccaggctggagtgcagtggcatgacctcagcgcgctgcaacctctgcctcctgggttcaagcaattctcctgcctcagccttccgagcagctgggaccacaggcatgtgccattacgcctggctaa-tttttttgtatttttagtagagaagacatttcaccatgttg-accaggctggtctcgaactcctgacctcaagtaatcctcctgcctcagtctcct i macFas5.chr5 I 3 C 0 s papAnu2.chr5 175986834 254 + 178775436 t-tattttttttgagatggagtcttgctctgtca-ccagactggagtgcagtggcatgacctcagcgcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagccttccgagcagctgggaccacaggcatgtgccatcacgcctggctaa-tttttttgtatttttagtagagaagacatttcaccatgttg-accaggctggtctcgaactcctgacctcaagtaatcctcctgcctcagtctccc i papAnu2.chr5 I 3 C 0 s chlSab2.chr7 132829641 255 + 135778131 tatttattttttgagatagattcttgctctgtca-ccaggctggagtgcagtggcatgacctcagcacactgtaacctctgcctcctgggttcaagcaattctcctgcctcagccttctgagcaactgggaccacaggcatgtgccatcacgcctggctaa-tttttttgtatttttagtagagaagacatttcaccatgttg-accaggctggtcttggactcctgacctcaagtaatcctcctgcctcagtctccc i chlSab2.chr7 I 3 C 0 s calJac3.chr3 188212913 253 - 190850796 -----ttattctgagatggagtctcgctctgtcacccaggctggagtgcagtggtatgatcttggcccactgcaacctctgcctcctgggttcaagcaatcctcctgcctcagcctctggagcagctgggattatggacttgcaccaccacacccagctaaggttttctgtatttttagtagagacgaggtttcatcatgttgttccaggctggtctcaaactcctgagctcaagtaatcctcctgcctcagcctccc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15707727 0 - 59632846 C e mm10.chr8 84698944 0 - 129401213 C e ponAbe2.chr4 195259848 970 + 198332218 M a score=97097.000000 s hg38.chr4_KI270785v1_alt 21454 41 + 119912 aaagtgctgagattgcaggtatgagccactgcac--------ccggcca s panTro4.chr4 190293985 41 + 193495092 aaagtgctgagattgcaggtatgagctactgcac--------ccggccA i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111231562 41 + 115148730 gaagtgctgagattgcaggcatgacccactgcac--------ccggcca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034792 41 + 184069350 aaagtgctgggattgcaggcatgagccactgcac--------ctggtcA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186371972 41 + 189454096 aaagtgctgggattgcaggcatgagccactgcac--------ctggtcA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987088 41 + 178775436 aaagtgctgggattgcaggcatgagccactgcac--------ctgttcA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829896 41 + 135778131 aaagtgctgggattgcaggcatgaaccactgcac--------ctggtcA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188213166 41 - 190850796 aaagtgctgggattacaggcatgagccactgcgc--------tcggccA i calJac3.chr3 C 0 C 0 s mm10.chr8 84698944 49 - 129401213 AAAGACCTGAGCATCTGAGGATGAGCTGCTGTGCAGGGAAGGCAGGGCT i mm10.chr8 C 0 C 0 e canFam3.chr16 15707727 0 - 59632846 C e ponAbe2.chr4 195259848 970 + 198332218 M a score=975593.000000 s hg38.chr4_KI270785v1_alt 21495 368 + 119912 agaatggaatTAAGAATGTTCAGTTTCTTATTTCAGCCTTGGAACACTAATATTAATTGAATG---------TGTTGTTTTCTCCTAAATTTATGTTTGTA--TTTTTTCATTGGTTTAGTTCAGTTGGAAGTGTAATTTCACATTAA--CGGGGGA-ACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACTGAAGTGGTTTGGAACACGGCATTAGCCAATATAGCCAGAAAGAAAAAGGGAAGAAATCAGTAGAAAAAAATGCCTATATCAATATTAACTTCTTTTTCAGCATTCAATATGCTT------------GACTTTTTCTCTTATGA---------GAAAAAGTCCTCCTAATGCTTAACCTTAACCTC s panTro4.chr4 190294026 347 + 193495092 AGAATGGAATTAAGAATGTTCAGTTTCTTATTTCAGCCTTGGAACACTAATATTAATTGAATG---------TGTTGTTTTCTCCTAAATTTATGTTTGTA--TTTTTTCATTGGTTTAGTTCAGTTGGAAGTGTAATTTCACATTAA--CAGGGGA-ACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACTGAAGTGGTTTGGAACACAGCATTAGCCAATATAGCCAGAAAGAAAAAGGGAAGAAATCAGTAGAAAAAAATGCCTATATCTATATTAACTTCTTTTTCAGCGTTCAGTATGCTT------------GACTTTTTCTCTTATGA---------CA---------------------CCTTAACCTC i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111231603 351 + 115148730 agaatggaatTAAGAATGTTCAGTTTCTTATTTCAGCCTTGGAACACTAATATTAATTGAATG------TGTTGTTGTTTTCTCCTAAATTTATGTTTGTA-TTTTTTTCATTGGTTTAGTTCAGTTTGAAGTGTAATTTCACATTAA--TGGGGGA-ACTAAATCAATTACATGTGTTCTTAATGGTCGAGTAGTGTCT-GCAAC-TTGGTTAAACAGTGAAGTGGTTTGGAACACAGCATTAGCCAATATAGCCAGAAAGAAAAAGGGAAGAAATCAGTAGAAAAAAATGCCTATATCAATATGAACTTCTTTTTCAGCATTCAATATGCTT------------GACTTTTTCTCTTATGA---------CA---------------------CCTTAACCTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181034833 352 + 184069350 AGAATGGAATTAAGAATGTTCAGTTTCTTATTTCGGCCTTGGAACAGTAATATTAATTGAATG------TGTTGTTGTTTTCACCTAAATTTATGTTTGCATTTTTTTTCATTGGTTTAGTTCAGTTTGAAGTGTAGTTTCACATTAA--GGGGGGACACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACTGAAGTGGTTTGGAACACAGCATTAGCCAATATAGCCAGAAAGAAAAAGGGAAGGAATCAGTAG-AAAAAATGCCTATATCAATATTAACTTCTTTTTCAGAATTCAATATGCTT------------GACTTTTTCTCTTATGA---------TA---------------------CCTTAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372013 352 + 189454096 AGAATGGAATTAAGAATGTTCAGTTTCTTATTTCGGCCTTGGAACAGTAATATTAATTGAATG------TGTTGTTGTTTTCACCTAAATTTATGTTTGCATTTTTTTTCATTGGTTTAGTTCAGTTTGAAGTGTAGTTTCACATTAA--GGGGGGACACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACTGAAGTGGTTTGGAACACAGCATTAGCCAATATAGCCAGAAAGAAAAAGGGAAGGAATCAGTAG-AAAAAATGCCTATATCAATATTAGCTTCTTTTTCAGAATTCAATATGCTT------------GACTTTTTCTCTTATGA---------TA---------------------CCTTAACCTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987129 354 + 178775436 AGAATGGAATTAAGAATGTTCAGTTTCTTATTTCAGCCTTGGAACACTAATATTAATTGAATG------TGTTGTTGTTTTCACCTAAatttatgtttgcattttttttcattgGTTTAGTTCAATTTGAAGTGTAATTTCACATTAAggggggggACACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACCAAAGTGGTTTGGAACACAGCATTAGCCAATATAgccagaaagaaaaagggaaggaatcAGTAG-AAAAAATGCCTATATCAATATTAACTTCTTTTTCAGAATTCAATATGCTT------------GACTTTTTCTCTTATGA---------CA---------------------CCTTAACCTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132829937 351 + 135778131 AGAATGGAATTAAGAATGTTCGGTTTCTTATTTCAGCCTTGGAACACTAATATTAATTGAATG------TGTTGTTGTTTTCACCTAAATTTATGTTTGC-TTTTTTTTCATTGGTTTAGTTCAGTTTGAAGTGTAGTTTCACATTAA--GGGGGGACACTAAATCAATTACATGTGTTCTTAATGTTCCAGTAGTGTCT-GCAAC-TTGGTTAAACACTGAAGTGGTTTGGAACACAGCATTAGTCAATAGAGCCGGAAAGAAAAAGGGAAAGAATCAGTAG-AAAAAATGCCTATATCAATATTAACTTCTTTTTCAGAATTCAATATGCTT------------GACTTTTTCTCTTATGA---------CA---------------------CCTTAACCTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188213207 337 - 190850796 AGGATGGAATTAAGAATGTTGAGTTTCTTACTTCAGCCTCAGAGCACTAATAGTAATGAAATG------TGGTGTTGTTTTCTCCTAGATTTATGTTTGCA-TTTTTTTCATTGGTTGAGTTCAGTTTGAAATGTAATTTCATGTTAA-GGGGGGGACGCTAAATCGATGACATGTGTCCCTCATGTTCCAGTTGCATCT-GCAACAGTGGTGAAGCACGGAAGAGGTTTGGAATAC---------------AGCCAGAAAG--AAAGGGGGGGAATCGGGAGAAGAAAACGCCGATTTCAGTATCAGCTTCTTTTTCAGCGTTCAGTATACTT------------AACGTTTTCTCTTCTGA---------CA---------------------ACTTGTTTTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84698993 374 - 129401213 CGAATCAGAATGAGAGCTGTTTGTTTTCTCCTTCAGCCTTAGAACGTGGG---TAATTAAATGTCTTGCTTTTGTTGTTGTCTCCAACACAAGTGCCTGT---TCTTTTCTCAGGCTTAGTTCATTTTGAAACATGATTCCATTTTAA--GGGTGAATACTGAATCAATTACCTAGCTTCCAAGTATTCCAGGAGTGTCTGGTAAC-CGGGCAAACTGCTGAAGTGGTGTGGAATACAGCTTTAGTCAAAATAGCCAAGAAGAACGAAGAAAGAAATCAGCAG-GAAAGCTGTATACCTGAATGGGCACTTCTTTTCCAGCATGCAGTATGGTTTTAATGCTGGGCTATTTTTTTTTTTTTTAATCTGAGATCA---------------------CCCTAACCTC i mm10.chr8 C 0 I 522 s canFam3.chr16 15707727 352 - 59632846 AAAATGGAATTCAAAATGTTCAATTTCTTACTTCAGGCTTGCAACACAAATAATAATTAAATT---TCCTGTTGTTGTTTTCTTCTAAATTTATGTTTGCATTTCTTTTCATTGGCTCAGTTCAGTTGAAAATACAATTTTATATTAA--GGGGCAGCACTAAATCAATTATTT-TCTTCTTAATGTTCCAGTAGTGTCTGGTAAG-TTGATGAAATACTGAAGTGGCTCGGAATATTGCATTAGTCAATATAGCTACAAAGAATAAGGAAAGAAATCAGTGG-AAAGAATAC--ATATGAATAACCACTT-TTCTCCAGCACACAACCTGCTT-------------ACTTTTTCTCCTGTGG--------CCA---------------------CATTAACCCC i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195259848 970 + 198332218 M a score=156495.000000 s hg38.chr4_KI270785v1_alt 21863 61 + 119912 CTCCTAAAT----GCTAGCTGTCTAGACCTACTTCCTATACTCCTATTTTCATATTACTTTTTGT s panTro4.chr4 190294373 61 + 193495092 CTCCTAAAT----GCTAGCTGTCTAGACATACTTCCTATACTCCTATTTTCATATTACTTTTTGC i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111231954 61 + 115148730 CTCCTAAAT----GCTGGCTGTCTAGACATACTTCCTATACTCCTATTTTCATATTACTTTTTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035185 61 + 184069350 CTCCTAAAT----GCTAGCTGTCCAGACATACTTCCTATACTCCTATTTTCATATTACTTTTTGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372365 61 + 189454096 CTCCTAAAT----GCTAGCTGTCCAGACATACTTCCTATACTCCTATTTTCATATTACTTTTTGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987483 61 + 178775436 CTCCTAAAT----GCTGGCTGTCCAGACATACTTCCTATACTCCTATTTTCATATTACTTTTTGc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830288 61 + 135778131 CTCCTAAAT----GCTAGCTGTCCAGACATACCTCCTATACTCCTATTTTTATATTACTTTTTGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188213544 65 - 190850796 CTGCTAGATGCTGGCTGGCTGTCTAAACATACTTCCTGTTCTCCTATTTTCATGTTACCGTCTGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15708079 52 - 59632846 TTGCTAAGT----ACTGGCTGTCTGGAC---------ATGCTACTATTTTCAGATTGCTTTTttt i canFam3.chr16 C 0 I 192 e mm10.chr8 84699367 522 - 129401213 I e ponAbe2.chr4 195259848 970 + 198332218 M a score=-306.000000 s hg38.chr4_KI270785v1_alt 21924 1 + 119912 G s panTro4.chr4 190294434 1 + 193495092 G i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111232015 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035246 1 + 184069350 A i rheMac3.chr5 C 0 I 4 s macFas5.chr5 186372426 1 + 189454096 A i macFas5.chr5 C 0 I 4 s papAnu2.chr5 175987544 1 + 178775436 g i papAnu2.chr5 C 0 I 4 s chlSab2.chr7 132830349 1 + 135778131 A i chlSab2.chr7 C 0 I 4 s calJac3.chr3 188213609 1 - 190850796 C i calJac3.chr3 C 0 C 0 s canFam3.chr16 15708323 1 - 59632846 A i canFam3.chr16 I 192 C 0 e mm10.chr8 84699367 522 - 129401213 I e ponAbe2.chr4 195259848 970 + 198332218 M a score=665788.000000 s hg38.chr4_KI270785v1_alt 21925 267 + 119912 TTTAAACATTTACTTCTTCACTATTTA--TTTCCTTTGCCTTTCT---ATCCACTATTTTCTTATTCTCCC-TTTTTTTCCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG--------------------TTTTTTTTTTAGCCTTTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATGGCTTTGGAGAAATGAAT---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTCCAGATAGGGGA--TTTTTTTTTT--AAT s panTro4.chr4 190294435 266 + 193495092 TTTAAACATTTACTTCTTCACTATTTA--TTTCCTTTGCCTTTCT---ATCCACTATTTTCTTATTCTCCC-TTTTTTTCCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG--------------------GTTTTTTTT-AGCCATTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATGGCTTTGGAGAAATGAAT---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTCCAGATGGGGGA--TTTTTTTTTT--TAT i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111232016 265 + 115148730 TTTAAACATTTATTTCTTCAC----TA--TTTCCTTTGCCTTTCT---ATCCACTATTTTCTTATTCTCCCTTTTTTTTTCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG--------------------GTTTTTTTT-AGCCTTTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATGGCTTTGGAGAAATGAAT---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAACG-TTAGGAGATTTTGAGTTCCAGATGAGGGA--TTTTTTTTTTTGTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035251 273 + 184069350 TTTAAACATTTACTTCTTCACTATTTA--TTTCCTTTGCCTTTCT---AGCCACTATTTTCTTATTCTCCT-TTTTTTTCCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG-----------------TTTTTTTTTTTT-AGCCTTTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATCGCTTTGGAGAAATGAAC---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTCCAGATAAGGAATTTTTTTTTTTTTAAAT i rheMac3.chr5 I 4 C 0 s macFas5.chr5 186372431 272 + 189454096 TTTAAACATTTACTTCTTCACTATTTA--TTTCCTTTGCCTTTCT---AGCCACTATTTTCTTATTCTCCT-TTTTTTTCCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG-----------------TTTTTTTTTTTT-AGCCTTTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATCGCTTTGGAGAAATGAAC---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTCCAGATAAGGAA-TTTTTTTTTTTTAAAT i macFas5.chr5 I 4 C 0 s papAnu2.chr5 175987549 267 + 178775436 tttaaacatttacttcttcactattta--tttcctttgcctttct---aTCCACTGTTTTCTTattctcc--ttttttccccttcatttaaTAGTTTCTGAAAACTCATTTTTATCACTGAGTG--------------------ttttttttt-AGCCTTTTCC---GGAGGCAGATAATTACCACTAGAA---TGAT----CAGTGGCTTTGTAGAAATGAAC---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTCCAGAGGaggga--ttttctttaaaaaat i papAnu2.chr5 I 4 C 0 s chlSab2.chr7 132830354 268 + 135778131 TTTAAACATTTACTTCTTCACTATTTA--TTTCCTTTGCCTTTCT---ATCCACTATTTTCTTATTCTCCT-TTTTTTTTCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCACTGAGTG--------------------GTTTTTTTT-AGCCTTTTCC---AGAGGCAGATAATTACCACTAGAA---TGAT----CAATCGCTTTGGAGAAATGAAC---TA--------------------------------------------------AAACATTAGTTCCA---------TGGATAAACTCATACTTAATG-TTAGGAGATTTTGATTTTCAGATAAGGAA--TTTTTTTTTTTAAAT i chlSab2.chr7 I 4 C 0 s calJac3.chr3 188213610 257 - 190850796 TTCAAACACTTACCTCTTCCTTAGGCG--TTTCCTTTGCTTATCT---CTTC-------------TTTCTC-CTTTTTTTCCTTCATTTAATAGTTTCTGAAAACTCATTTTTATCATTGAGTG-----------------------TTTTTT-AGGCTTTTCC---AGAGGCAGAGAA-TACCGCCAGAG---AGAT----AAATGGCTCTGGAGAAAGGAATTAATA--------------------------------------------------AAACATTAGTTCCATCAGTTCCGTGGGTAAACTCATACT----G-TTAGGAGATTTTGATTTCCCTATGAGGGA--TTTTTTTTTT--AAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84699889 294 - 129401213 TTTCAACATTTTCCTAATTGTCATTTCCTTTTCCATCACTATTCTGAAACCTATTATTTCTTTATTC-CTT-CCTCTACCCTTTCATTTAATGTCTTTTGAAAACTAATGCTTACCAGCACATGGTTTTAGCTTTCTGTTTCTTGTTTTGTTT-TGTTTTTTCCCAGAGAGGCAGAGACTGACCATTACAAAACCAAC----AAGTGAATTTGGAGAACTGGATTCCTG--------------------------------------------------AAACGCCAGTTCTG---------GAAAGGGATTCATATTTTGTGTTTAGAAAATTTTGCCTTCCAGAT--------TTCTTTCTTT--AAT i mm10.chr8 I 522 I 735 s canFam3.chr16 15708324 300 - 59632846 TTTAAATATTTATTTCCTTATTATTT---TTACCTTTGCTTTTCT---AT----TATTTTCTTATTCTCTC-CTTCTCCTCCTCCATTTAATATTTTTTGCATCCC----TTTACCACTGAATA------------------------GTTTT-AACCTTTTCC---AGAGTCAAAGCCCTGCCACTTGAA---TGATAAGGAAATGGGTTTGGAGAAATTAAC---TAATATATTAGTTATTAGTGCTGTGGATAAAGTTAGATCCCTGGAGAGTAAGAAACATCAGTTCTG---------TGGAAAACCTCATACTTCATG-TTAGGAGACTTCGGTTTCCAGATGGGGAT--CTTCAT--------- i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195259848 970 + 198332218 M a score=71273.000000 s hg38.chr4_KI270785v1_alt 22192 24 + 119912 CATCTAGACTACTCTT-GGCTTTCC s panTro4.chr4 190294701 24 + 193495092 CATCTAGACTACTCTT-GGCTTTCC i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111232281 24 + 115148730 CATCTAGACTACTCTT-GGCTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035524 24 + 184069350 CATCTAGACTACTCTT-GGCTTTCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372703 24 + 189454096 CATCTAGACTACTCTT-GGCTTTCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987816 24 + 178775436 gatctagACTACTCTT-GGCCTTCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830622 24 + 135778131 CATCTAGACTACTCTT-GGCCTTCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188213867 24 - 190850796 CATCTAGACTACTCTT-GGCTTTCC i calJac3.chr3 C 0 I 309 s canFam3.chr16 15708624 25 - 59632846 CATCTGGACTGTTCTTCGGCTCTCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84700183 735 - 129401213 I e ponAbe2.chr4 195259848 970 + 198332218 M a score=364569.000000 s hg38.chr4_KI270785v1_alt 22216 136 + 119912 CTGCTAATTCTTAAGTTTGTGTACAATGTCCAACCTAACCGTGTAGGCTGATTGTTGAAAGGAACACTGGTGAACAGATCCAAATCTGTCACACTCCAGGCAAATAGCAATGGTGACACAAAAATGAGAAATAGGA s panTro4.chr4 190294725 136 + 193495092 CTGCTAATTCTTAAGTTTGTGTACAATGTCCAACCTAACCGTGTAGGCTGATTGTTGAAAGGAACACTGGTGAACAGATCCAAATCTGTCACACTCCAGGCAAATAGCAGTGGTGACACAAAAATGAGAAATAGGA i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111232305 136 + 115148730 CTGCTAATTCTTAAGGTTGTGTACAATGTCCAACCTAACTGTGCAGGCTGATTGTTGAAAGGAACACTGGTGAACAGACCCAAATCTGTCACACCCCAGGCAAATAGCAATGGTGACACAAAAATGAGAAATAGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035548 136 + 184069350 CTGCTAATTCTTAAGGTTGTGTACAATGTCCAACCTAACTGTGTAGGCTGATTGTTGAAAGGAACACTGGTTAACAGATTCAAATCTGTCTCACCCCAGGCAAATAGCAATGGAGACACAAAAATGAGAAATAGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372727 136 + 189454096 CTGCTAATTCTTAAGGTTGTGTACAATGTCCAACCTAACTGTGTAGGCTGATTGTTGAAAGGAACACTGGTTAACAGACTCAAATCTGTCTCACCCCAGGCAAATAGCAATGGTGACACAAAAATGAGAAATAGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987840 123 + 178775436 CTGCTA-------------TGTACAATGTCCAACCTAACTGTGTAGGCTGATTGTGGAAAGGAACACTGGTTAACAGACCCAAATCTGTCTCACCCCAGGCAAATAGCAATGGTgacacaaaaatgagaaataggA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830646 136 + 135778131 CTGCTAATTCTTAAGGTTGTGTACAATGTCCAACCTAACTGTGTAGGCTGATTGTTGAAAGGAACACTGGTTAACAGACTCAAATCTGTCTCACCCCAGGCAAATAGCAATGGTGACACAAAAATGAGAAATAGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188214200 135 - 190850796 CTGCTAATTCTTAACATTGTGTACCGTGTTCAACCTAACTGTGTAGGCTGATTGTTGAAAGGAACACTGGTTCACGGACACAAATCTGTCACACCCCA-GCAAATAGCAATGGTGACAGAAAAACGAGAAATAGGA i calJac3.chr3 I 309 C 0 s canFam3.chr16 15708649 135 - 59632846 TTGCTAACTTTTAAGATTGAATGTACTGTCCAGACTAACTGTGGGGGATGATCACGGAAAGGGACGTTGGTTCATGGGCCCAAA-CTGTCACACCCCAAGCAAACGACAAAGGTGACATAAAAGTGCGAAATAAGA i canFam3.chr16 C 0 C 0 e mm10.chr8 84700183 735 - 129401213 I e ponAbe2.chr4 195259848 970 + 198332218 M a score=30919.000000 s hg38.chr4_KI270785v1_alt 22352 15 + 119912 Ctgctgtggac----tatt s panTro4.chr4 190294861 15 + 193495092 Ctgctgtggcc----tatt i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111232441 19 + 115148730 Ctgctgtggactgagtatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035684 19 + 184069350 Gtgctgtggactgagtatt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372863 19 + 189454096 Gtgctgtggactgaatatt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987963 19 + 178775436 CTGCTGTGGATTGAGCATT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830782 19 + 135778131 Gtgctgtggactgagtatt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188214335 19 - 190850796 Ctgctatggactgaatatt i calJac3.chr3 C 0 C 0 e canFam3.chr16 15708784 0 - 59632846 C e mm10.chr8 84700183 735 - 129401213 I e ponAbe2.chr4 195259848 970 + 198332218 M a score=137490.000000 s hg38.chr4_KI270785v1_alt 22367 73 + 119912 tgtgtcaccccaaattcatatttcgaaaccctaatccccaaggtgatggtattaggaggtggggcctttgtga s panTro4.chr4 190294876 73 + 193495092 tgtgtcaccccaaattcatatttcgaaaccctaatccccaaggtgatggtattaggaggtggggcctttgtga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195260818 73 + 198332218 tgtgtcaccccaaattcatatttcgaaaccctaatccccaaggtgatggtattaggaggtagggcctttgtga i ponAbe2.chr4 M 970 C 0 s nomLeu3.chr7b 111232460 73 + 115148730 tgtgtcaccccaaattcatatttcgaaaccctaatccccaaggcgatggtattaggaggtggggcctttgtga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035703 39 + 184069350 tgtgtcaccccaa----------------------------------ggtattaggaggtggggcctttggga i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372882 39 + 189454096 tgtgtcaccccaa----------------------------------ggtattaggaggtggggcctttggga i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175987982 73 + 178775436 TGTGTCAccccaaattcatattttgacaccctaatccccaaggtgatggtattaggaggtggggcctttgtgA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830801 39 + 135778131 tgtgtcaccccaa----------------------------------ggtattaggaggtggggcctttggga i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188214354 71 - 190850796 tgtgtcaccccaaattcatattttgaaaccctagtccctaaggtaatggtatt--gtggggggggctttgtga i calJac3.chr3 C 0 C 0 e canFam3.chr16 15708784 0 - 59632846 C e mm10.chr8 84700183 735 - 129401213 I a score=817074.000000 s hg38.chr4_KI270785v1_alt 22440 275 + 119912 gttgattatgtcatgaaggtgaagccctcatgaatggaattagcgtccttataagagacccctgggagatttc---taactcctgcc-acatgagaacacagcgagaggacagctgtct-atgatgcaagaagcaggccctcagcaggcactgtgtctgctgcaccttactcttagacttcccaacttccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatgctattattgttatagcagcctgaatggattgagacaAAAAC s panTro4.chr4 190294949 276 + 193495092 gttgattatggcatgaagttgaagctctcatgaatggaattagtgtccttataagagacccctgggagatttc---tcactcctgcc-acatgagaacacagcgagaggacagctgtcttatgatgcaagaagcaggccctcagcaggcactgtgtctgctgcaccttactcttagacttcccaacctccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatgctattattattatagcagcctgaatggatttagacaAAAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195260891 275 + 198332218 gttgattatgtcatgaaggtaaagccctcatgaatggaattagtgtccttataagagacccctgggagatttc---tcactcctgcc-acatgagaacacagcgagaggacagctgtct-atgatgcaagaagcaggccctcagcaggcactgtgtctgctgcaccttactcttagacttcccaacctccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatgctattattgttatagtagcttgaatggatttagacaAAAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111232533 275 + 115148730 gttgattatgtcatgaaggtgaagccctcatgaatggaattagtgtccttataagagacccctgagagatttc---tcactcctgcc-acatgagcacacagtgagaggacagctgtca-atgaagcaagaagcaggccctcagcaagcactgtgtctgctgcaccttactcttagacttcctaacctccagaacta----tgagaaatgaaggctcgttgattacaagccatgtagtctatgctattattgttatagtagcctgaatggatttagacaAAAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181035742 275 + 184069350 gttgattatgtcatgaaggtgaggccctcatgaatggaattagtgtccttgtaggagacccctaggagatttc---tcactcctgcc-acatgagcgcacagcgagaggacagctgtct-atgaagccagaagtaggccctcggcaggcactgcgtctgccacaccttactcttggacttcccaacctccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatggtatttttgttacagtagcctgtatggatttagacaAAAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186372921 275 + 189454096 gttgattatgtcatgaaggtgaggccctcatgaatggaattagtgtccttgtaggagacccctaggagatttc---tcactcctgcc-acatgagcgcacagcgagaggacagctgtct-atgaagccagaagtaggccctcggcaggcactgcgtctgccacaccttactcttggacttcccaacctccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatggtatttttgttacagtagcctgtatggatttagacaAAAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175988055 275 + 178775436 GTTGATTATGTCATGaaggtgaagccctcatgaatggaattccTGTCCTTGTAGGAGACCCCTAGGAGAGTTC---TCACTCCTGCC-ACATGAGCGCACAGCGAGAGGACAGCTGTCT-ATGAAGCCAGAAGTAGGTCCTCAGCAGGCACTGCGTCTGCCACACGTtactcttggacttcccaacctccagaacta----tgagaaatgaaGGCTCGTTGATTATAAGCCAcgcagtctatggtatttttgttacagtagcccGAATGGATTTAGACAAAAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132830840 275 + 135778131 gttgattatgtcatgaaggtgaagccctcatgaatggaattagtgtccttgtaggagacccctaggagatttc---tcactcctgcc-acatgagcgcacagcgagaggacagctgtct-atgaagccagaagtaggccctcagcaggcactgcgtctgccacaccttactcttggacttcccaacctccagaacta----tgagaaatgaaggctcgttgattataagccatgcagtctatggtatttttgttacagtagcctgtatggatttagacaAAAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188214425 260 - 190850796 gttgattatgtcatgaaggacaaggccccatgaatggaattcatgtccttataagaga-gcctgggagatttc---tccctcctgcc-acgtgagcacactgccagaggacagctgtct-gtgcagccagaagcatgcccgtagcagacactgcatctgccccacctcactcttggccatcctaacctccagaactg----taaagagtgaaggct------------gc--tgctgtctatggtgtttttgttatagtaacctgaacgcatttagacaGAAAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84700918 239 - 129401213 gTCATTTACGTCATCATGGTAGCACACTCGTGAACGAGATG------CTTAT---------CTGTAAGATTCCATATCCCCTTTGCCTGCATGTA-ACAgaacgaaaagatggccctca-gtgacccagatagcag--------------------------taacttgatcttagacttcccagcttctggaactatgagtgagaaataaatatttgctttttgggacccactcatctcacagtatttttgtcgtagacgtctaaatggattcagacaAAG-- i mm10.chr8 I 735 C 0 e canFam3.chr16 15708784 0 - 59632846 C a score=3274078.000000 s hg38.chr4_KI270785v1_alt 22715 945 + 119912 CCTCCTCAACAGAACTTTAGGCTCCTTAGCCAGTGTTATGGAGCTCTTTTAAAAAGCATAGAAATCACTGGCAAAGAGCTCCTGGCATTGA-----------GCCACG-TGACAGTTAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCAAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAGCTGAAACAGTAAGACTATAA-GCAGAGGAAGAGTGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGAGGGTCCCAGGAGTACACACATCAAATGTGG-TTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCATGTAGTTATCAATGTGTTACTCTTTTCTTTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAATGCAGGAACGTGGTAGTTAGTGATGGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-CACAGGAAATTGTGCAAGT-ATAATAAAAGTAACAGATagcatttattgcttga----ttgctatctgccaggctcagtgctaggatat-ggaaatatagagtcacgccaagtaactttggtccctgccctcaagct--tagtctgatgCAAATCCACCATGAACCAGGGA-ATTGA---CAGGCACTGAAGGTAAAGCCAGTGCTTCAAGACGTCA-----GACAAGACAAAATGTCAGAAAAACAAACAACAGAGGAATTGCT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCTTCTGCAGCCAAGAAGGCTTCTTTC--AAGTAGGGGTGCAGATGTCTCTCAGTGGATGTGATATACCGAGGTCTTGCAGAATGAAGCAAGGGAGAGACAAAGGGGTGGGGAAAGTGGCCAACCTGGCGGGAGAGGGGAGGGCAG------------------------------- s panTro4.chr4 190295225 945 + 193495092 CCTCCTCAACAGAACTTTAGGCTCCTTAGCCAGTGTTATGGAGCTCTTTTAAAAAGCATAGAAATCACTGGCAAAGAGCTCCTGGCATTGA-----------GCCACG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCAAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAGCTGAAACAGTAAGACTATAA-GCAGAGGAAGAGTGGCGGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGAGGGTCCCAGGAGTACACACATCAAATGTGG-TTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCATGTAGTTATCAATGTGTTACTCTTTTCTTTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAATGCAGGAATGTGGTAGTTAGTGATGGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-CACAGGAAATTGTGCAAGT-ATAATAAAAGTAACAGATagcatttattgcttga----ttgctatctgccaggctcaatgctacgatgt-ggaaatatagagtcacgccaagtaactttggtccctgccctcaagct--tagtctgatgCAAATCCATCATGAACCAGGGA-ACTGA---CAGGCACTGAAGGTAAAGCCAGTGCTTCAAGACGTCA-----GACAAGACAAAATGTCAGAAAAACAAACAACAGAGGAATTGCT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCTTCTGCAGCCAAGAAGGCTTCTTTC--AAGTAGGGGTGCAGATGTCTCTCAGTGGATGTGATATACCGAGGTCTTGCAGAATGAAGCAAGGGGGAGACAGAGGGGTGGGGAAAGTGGCCAACCTGGCGGGAGAGGGGAGGGCAG------------------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195261166 957 + 198332218 CCTCCTCAACAGAACTTTAGGCTCCTTAGCCAGTGTTATGGAGCTCTTTTAAAAAGCATAGCAATCACTGACAAAGAGCTCCTGGCATTGAGCCACGTGAATGCCACG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCAAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAGCTGAAACAGTAAAACTATAA-GCAGAGGAAGAGTGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGAGGGTCCCAGGAGTATACACATCAAATGTGG-TTTTTGAACCG-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCATGTAGTTATCAATGTGTTACTCTTTTCTTTGGTTGAAAGGATTTTGGGTCAGGCGC-TGATCTTTCTTTGAATATATATGCCTGTTGGATGCCTGAACAGTGA-GAAAGGCAGGAACGTGGTAGTTAGTGATGGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-CACAGGAAATTGTCCAAGT-ATAATAAAAGTaacagatagcatttattggttga----ttgctatctgccaggctcagtgctaggatgt-ggaaatatagagtcatgccaagtaactttggtccctgccctcaagct--tagtctgatgcaaatccaccatgaaccaggga-attga---caggcactgaaggtaaagccagtgcttcaagacatca-----gacaagACGAAATGTCAGAAAAACAAACAACAGAGGAATTGCT---ATGGGAATCTTGAAAG--------------------------AAAAAG--CTATTTCTTCTGCAGCCAAGAACTCTTCTTTT--AAGTAGGGGTGCAGATGTCTTTCAGTGGATGTGATATACCGAGGTCTTGCAGAATGAAGCAAGGGGGGGACAGAGGGGTGGGGAAAGTGGCCAGCCTGGCGGGAGAGGGGAGGGCAG------------------------------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111232808 942 + 115148730 CCTCCTCAACAGAA-TTTCGGCTCCTTAGCCAGTGTTATGGAGCTCTTTTAAAAAGCACAGAAATCACTGGCAAAGAGCTCCT-GCATTGA------------CCACG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCGAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAGCTGAAACAGTAAGACTACAA-GCAGAGGAAGAGTGGCAGGAAAGAACAAAACTCAATTC-AAAGGTTGCCAGCACACAGTGAATTGCAG----GGAACCAGCTATCATGAGAGAGGGTCCCAGGAGTACACACATCAAATGTGA-TTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCATATAGTTATCACTGTGTTACTCTTTTCTTTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTTTTGGATGCCTGAACAGTGA-GAAATGCAGGAATGTGGTAGTTAGTGATGGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-TGCAGGAAATTGTGCAAGT-ATAATAAAAGTAACAGATagcatttattggttga----ttgctatctgccaggctcaatgctaggatgt-ggaaatttagagtcacgccaagtaactttggtcccagccctcaAGTC--TTGTCTGATGCAAATCCACCATGAACCAGGGA-ATTGA---CAGGAACTGAAGGAAAAGCCAGTGCTTCAAGACGTCG-----GACAAGACAAAATCTCAGAAAAACAGACAACAGAGGAATTGCT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCTTCTGCAGCCAAGAAGTCTTCTTTC--AAGTAGGGGTGCAGATGTCTCTCAGTGGATGTGATATACCGAGGTCTTGCAGAATGAAGCAAGGGGGAGACAGAGGGGTGGGGAAAGTGGCCAACCTGGCGGGATAGGGGAGGGCAG------------------------------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181036017 941 + 184069350 CCTCCTCAACAGAAATTGAGGCTCCTTAGCCAGTGTTACGGAGCTCTTTTAAAAAGCACAG-AATCCCTGGCAAAGAGCTCATGGCATTGA-----------GCCATG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCCAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAACTGAAACAGTAGGACTATTA-GCAGAGGAAGAGCGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGACAGTCCCAGGAGTACACACATCAAATGTGG-CTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCGTGTGGTTATCACTGTGTTACTCTTTTCTGTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAAT-CAGGAATGTGGTAGTTAGCGATTGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-TGCAGGAAATGGTGCAAGT-ATAATAAAAGcaacagatagcatttattggttga----ttgctatctg-caggctcaatgctaggatgt-ggaaatatagtgccacacaaagtaactttggtccctgccctcaagct--tagtctgatgCAAATCCACCAGGAACCAGGGA-ATTGA---CAGGCACTGAAGGTAAAGCCAGTGCTTCAAGATGTCA-----GACAAGACAAAATGTCAGGAAAACAAACAACAGAGGCACTGGT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCCTCTGCAGCCAAGAAGTCCTCTTTC--AAGTAGGGATGCAGACGTCTCTCAGTGGATGTGATATA-CGAGGTCTTGCAGAATGAAACAAGGGGGAGACAGAGGGGTGGGGAAAGTGACCAACCTGGTGGGAGAGGGGAGGGCAG------------------------------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186373196 940 + 189454096 CCTCCTCAACAGAAATTGAGGCTCCTTAGCCAGTGTTACGGAGCTCTTTTAAAAAGCACAG-AATCCCTGGCAAAGAGCTCATGGCATTGA-----------GCCATG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCCAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAACTGAAACAGTAGGACTATTA-GCAGAGGAAGAGCGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGACAGTCCCAGGAGTACACACATCAAATGTGG-TTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCTGTGTGGTTATCACTGTGTTACTCTTTTCTGTGGTTGAAA-GATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAAT-CAGGAATGTGGTAGTTAGCGATTGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-TGCAGGAAATGGTGCAAGT-ATAATAAAAGcaacagatagcatttattggttga----ttgctatctg-caggctcaatgctaggatgt-ggaaatatagtgtcacacaaagtaactttggtccctgccctcaagct--tagtctgatgCAAATCCACCAGGAACCAGGGA-ATGGA---CAGGCACTGAAGGTAAAGCCAGTGCTTCAAGATGTCA-----GACCAGACAAAATGTCAGGAAAACAAACAACAGAGGCACTGGT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCCTCTGCAGCCAAGAAGTCCTCTTTC--AAGTAGGGATGCAGACGTCTCTCAGTGGATGTGATATA-CGAGGTCTTGCAGAATGAAACAAGGGGGAGACAGAGGGGTGGGGAAAGTGACCAACCTGGTGGGAGAGGGGAGGGCAG------------------------------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175988330 945 + 178775436 CCTCCTCAACAGAAATTGAGGCTCCTTAGCCAGTGTTACGGAGCTcttttaaaaagcacag-aatCCCTGGCAAAGAGCTCATGGCATTGA-----------GCCACG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCCAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAACTGAAACAGTAGGACTATTA-GCAGAGGAAGAGCGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCGGCTATCATGAGAGACAGTCCCAGGAGTACACACATCAAATGTGG-TTTTTGAACCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCATGTGGTTATCACTGTGTTACTCTCTTCTTTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAAT-CAGGAATGTGGTAGTTAGTGATTGTTAGAAGAGCAGGA-GAAGGCACAAAACCTGGATGT-TGCAGGAAATGGTGCAAGT-ATAATAAAAGCAACAGATAGCATTTATTGGTTGATTGCTTGCTATCTG-CAGGCTCAATGCTAGGATGT-GGAAATATAGTGTCACACAAAGTAACTTTGGTCCCTGCCCTGAAGCT--TAGTCTGATGCAAATCCACCAGGAACCAGGGA-ATTGA---CAGGCACTGAAGCTAAAGCCAGTGCTTCAAGATGTCA-----GACAAGACAAAatgtcagaaaaacaaacaacagaggCATTGCT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCCTCTGCAGCCAAGAGGTCCTCTTTC--AAGTAGGGATGCAGGTGTCTCTCAGTGGATGTGATATA-CGAGGTCTTGCAGAATAAAACAAGGGGGAGACAGAGGGGTGGGGAAAGTGACCAACctggtgggagaggggagggcag------------------------------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132831115 941 + 135778131 CCTCCTCAGCAGAAACTGAGGCTCCTTAGCCAGTGTTACGGAGCTCTTTTAAAAAGCACAG-AATCCCTGGCAAAGAGCTCATGGCATTGA-----------GCCACG-TGACAGATAGCAGAGGC-TGCTTTCTGCTTGGCCAGCTGTGCCAGGAGACAGAGCAGAGG--GTCAGCAGAGGGAACTGACACAGGAGGACTATTA-GCAGAGGAAGAGCGGCAGGAAAGAACAAAACTCAATTC-AAATGTTGCCAGCACACAGTGAATTGCAG----GGAACCAGCTATCATGAGAGACGGTCCCAGGAGTACACACATCAAATGTGG-TTTTTGATCCA-GAGGACCTCCTGACTGCTGGTGGCAGGATGTCTCTATTCCGTGTAGTTATCACTGTGTTACTCTTTTCTTTGGTTGAAAGGATTTTGGGTCAGGCAC-TGATCTTTCTTTGAATATATGTGCCTGTTGGATGCCTGAACAGTGA-GAAAT-CAGGAATGTGGTAGTTAGCGATTGTTAGGAGAGCAGGG-GAAGGCACAAAACCTGAATGT-TGCAGGAAATGGTGCAAGT-ATAATAAAAGcaacagatagcatttattggttga----ttgctatctg-caggctcaatgctaggatgt-ggaaatatagtgtcacacaaagtaactttggtccctgccctgaagct--tagtctgatgCAAATCCACCAGGAACCAGGGA-ATTGA---CAGGCACTGAAGGTAAAGCCAGTGCTTCAAGATGTCA-----GACAAGACAAAACGTCAGAAAAACAAACAACAGAGGCATTGCT---ATGGGAATCTTGAAAG---------------------------AAAAG--CTATTTCCTCTGCAGCCAAGAAGTCCTCTTTC--AAGTAGGAATGCAGACGTCTCTCAGTGGATGTGATACA-CGAGGTCTTGCAGAATGAAACAAGGGGGAGACAGAGGGGTGGGGAAAGTGGCCAACCTGGTGGGAGAGGGGAGGGCAG------------------------------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188214685 904 - 190850796 CTTCCTCAACAGAACTTTAGGCTTCTTAGCCGGTGTTCTGGAGCTCTTTTAAAAAGCATAGAAATC---------------------------------------------ACAGATAGCAGAGGC-TGCTCTCCGCATGGCCAGCTGTGCAAGGAGACAGAGCAGGGG--GTCAGCAGAGGGAGCTGAAACAGTAGGACTGTGA-GCAGAGGAAGAGC-ACAGGAAAGAACAAACTTCAATTC-AAATGTTGCCAGTTCACAGTGAATTGCAG----GGAACCAGCTATCGTGAGAGA--GTCCCAGGAGTACAAACATCAAATGCAG-TTTTTGAACCC-GAGGCCCTCCTGACTGCTGGTGTCAGGATGTCTCTATTCCACGTAGCTATCACCGAGTTACTTTTTTCTTTGGTTGAAAGTGTTTTGGGTCAGGTAC-TGATCTTTCTTTGAATCTATGTGCCTGTTGGGTGCCTGAGTAGTGA-GAAATGCGGGAGCGTGGTGGTCAGTGATGG-TAGGAGAGCCGGG-GAAGGCACAAAA-CTGAATGT-TGCTGGAAACTGTG--AAT-ATAATAAAAACAACAGATGGCATGTTTTGGTTGA----Ttgctatctgtcaggctcagtgccaggatgt-gataatatagtgtcacacacagtaactttggtccctgccctcaagct--tacTCTGATGCAAATCCACCAGGAGCCAGAGA-ATTCA---CAGGCACTG-AGGTAAAGCCAGTGCTTCAAGATGTCA-----GACAAGATGGAATTTCAGAAAAATAAACAGCAGATGCATTGCT---ACGGGAACCTTGAAAG---------------------------AAAAG--GTATTTTCTCTGCAGCCAAGAAGTCTTCTTTC--AAGTAGCAGTGCAGATGTCTCTCAGTGGGTGTGATATACCGAAGTCTTGTAGAATGAATCAAAGGGGAGACGGAGGAGCGGGGAAAATGGCCAGCCTGGCCTGGGAGGGGAGGGCAG------------------------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84701157 921 - 129401213 CAACCTCAGCAATGCGTTAGGTTTCCTAATCTGCATTACTGCCCTTCTAAAGGAAGCATAGAGATGGCTCGAGAAGACATCTTAGCGTTCA-----------GTCATGTTGGCGGGCATCCGAGTTGTGCCTTCTACTGAGCTGGCTGGGCAGGGATAAGCAGCC--GT--ATCAGCAGAGGGAGCTAAAACAGTGGGACTGTAAGGCAGAGGAGGAACATCAGGAAAGAAAAAAAGCCAGTTTGGGATTCTGCCGCTGCAGATTGAGCTTCAG----GGCAATCACTGTCATAAGAGACCACCCCAGGAGCGCAACGCTCAAATGTGA-TTTTTGAACCAGGAGGACCTCCCAAGTGTTGGGGGGTTGATGTATCTATTTTATGTGCTTATC--TCTGCTACCCTTTTCTGTGGTTGAGAGGACTTTGGGTCACACACTTTATCTTTCCTTGAATACATGTACTTGGTGGATGCCTGGGCCGTGAGGGAACGTGATAACGTGGTCGTTAGTCAGGGCTGGGAGAGCAAGGCTAAGGCAGATAGTCCGAATGTCTGCCTGAAAGTGGGCAGGTGGTGATCAAGTCAGCAGATATCGTTT----GCTGA----ATGCCATCAGCCAGGATAAGTGCTAGGACGT-GGCCATACAATGTCCCCTGGGGTAAATTTCACCCTGGACCTTCTAC----AGACTGATACAGATCCACTCGAGACTGGGGA-AGTCA---TGAGCTCCAAAG-----GCTAGGGCTTCAGGATGCCATATATTACAAGAC-AAGCGCCCTGGCAACAAACAGCAGCGCTGTTTGTTTCAAGTGAAAAAAAAAAA---------------------------AAAAGGTCTATTTCATCTTTAGTTAAGAGATCATGCTTC--ATACAGAAGGA----------------------------CGTAGTCTTGCAGAAGGGCACGAGGAAGCCATAGAATGATCAAAGAGTAAACCAGCATGACCCAAGGAGACAGGGCAG------------------------------- i mm10.chr8 C 0 I 767 s canFam3.chr16 15708784 987 - 59632846 CCTTCTAAGCAAAACTTCAGGCTTTTTAACCAGTGTCCTCAAGCTCTTCTATAAAGCATAGAAATGACTCACAAAACGGATCTGACATTAG-----------GCCACACCGAGAAACATCGGAGGGATGCTTTCTGCTGGGCTAGAGATACAAGGATGAGGAGCCGGGAGTGTCAGTAGAGGGAGCTGGAATAGTAGGGCTACGA-ATAGAGGAAAAGCTTTAGGAGAGAACAAAGGT-AATTC-AGATGTTGCCATTGTACAGTGAACTGGGGGGGCGGGGGTGGTTAGCATGAGAGGCTATCCCGGGAGGATAAACATCAAACGTAGCTTTTTGAACCAGGAGGACCTCCTGACTGCAAGTGTCACGATGTAACTATTCCAACCTGTTATCACTATGTCAC-CTTTTTTCAGGTTGAAAGGACCTGGGGTCATGCAA-TCATCTTTCCTTGAACACACGTGCCCG-TGGACCCCTGGGTAGAGACTGAGCATAATAATGTGGTTGGAAGCAACGGCAAGGAGCGCAG---AAAGG----AGGTCTGGATGA--------AACCGGGCAAGC-A----ATAAACAACTGATGCcacttattgattga----ttgctaagggccaggctcagtgctgggacgcagggaacttagt------caaggtgaatagaagctctgcccccaAGTTTCTAGTATGATGCAGATTAGCCAGAAACCAGGGACATCCATCCCAGGCACTGCGGGTTGACCCAGGGCTTCAAGATGCCA-----GACAAGACAAGACG----------AGGTATCAGATGCTTTTCT---ATGGAGAGCTTGaaaaaaaacaaaaacaaaaaacaaaaaacaaaaaaa--CCCCTCTTTTTTTAGCCTAGAAGTCCTATTCCATATGTAGAGGGGCAGAAATCTGTCAATGGACGTAAGAAACTAAGGTCTTGCAGAAGGGAGCAAGGAGGACATGGATGGGTGGGGACACGGGCTGAGCGGGCCACAGCAGAGAGAGCAGGGCTAATGCCAAGGGAGGAACTGACCCGCAG i canFam3.chr16 C 0 C 0 a score=18896.000000 s hg38.chr4_KI270785v1_alt 23660 7 + 119912 ---CTCAAAA s panTro4.chr4 190296170 7 + 193495092 ---CTCAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262123 7 + 198332218 ---CTCAAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233750 7 + 115148730 ---CTCAGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181036958 7 + 184069350 ---CTCAAAA i rheMac3.chr5 C 0 I 317 s macFas5.chr5 186374136 7 + 189454096 ---CTCAAAA i macFas5.chr5 C 0 I 317 s papAnu2.chr5 175989275 7 + 178775436 ---CTCAAAA i papAnu2.chr5 C 0 I 313 s chlSab2.chr7 132832056 7 + 135778131 ---CTCAAAA i chlSab2.chr7 C 0 I 318 s calJac3.chr3 188215589 7 - 190850796 ---CTCAAAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15709771 7 - 59632846 GACATCA--- i canFam3.chr16 C 0 C 0 e mm10.chr8 84702078 767 - 129401213 I a score=176441.000000 s hg38.chr4_KI270785v1_alt 23667 50 + 119912 CCCACCCACCGGCCAGACATTTACTTTAGGTCAACACCTCCAGCCCCGTA s panTro4.chr4 190296177 50 + 193495092 CCCACCCACCGGCCAGACATTTACTTTAGATCAGCACCTCCAGCCCCATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262130 50 + 198332218 CCCACCCACCGGCCAGACATTTACTTTAGATCAACACCTCCAGCCCCGTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233757 50 + 115148730 CCCACCCACCGGCCAGACATTTACTTTAGATCAACACCTCCAGCTCCGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037282 50 + 184069350 CCCACCCACTGGCCAGACATTTACTTTAGATCAACACCTCCAGCCCCAAA i rheMac3.chr5 I 317 C 0 s macFas5.chr5 186374460 50 + 189454096 CCCACCCACTGGCCAGACATTTACTTTAGATCAACACCTCCAGCCCCAAA i macFas5.chr5 I 317 C 0 s papAnu2.chr5 175989595 50 + 178775436 cccaCCCACCGGCCAGACATTTACTTTAGATCAACACGTCCAGCCCCAAA i papAnu2.chr5 I 313 C 0 s chlSab2.chr7 132832381 50 + 135778131 CCCACCCACTGGCCAGACATTTACTTTAGATCAACACCTCCAGCCCCAAA i chlSab2.chr7 I 318 C 0 s calJac3.chr3 188215596 50 - 190850796 CCCACCCACCAGCCAGACATTTGCTTTAGACCAACACCTCCACCCCCAAA i calJac3.chr3 C 0 I 389 s canFam3.chr16 15709778 50 - 59632846 TCAGCCCACTGGCTAGACATTTGCTTCTGATGGACATTCCCACCCCCAAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84702078 767 - 129401213 I a score=13095.000000 s hg38.chr4_KI270785v1_alt 23717 3 + 119912 GAG s panTro4.chr4 190296227 3 + 193495092 GAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262180 3 + 198332218 GAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233807 3 + 115148730 GAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037332 3 + 184069350 GAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374510 3 + 189454096 GAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989645 3 + 178775436 GAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832431 3 + 135778131 GAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216035 3 - 190850796 GAG i calJac3.chr3 I 389 C 0 s canFam3.chr16 15709828 3 - 59632846 GAG i canFam3.chr16 C 0 C 0 e mm10.chr8 84702078 767 - 129401213 I a score=211979.000000 s hg38.chr4_KI270785v1_alt 23720 58 + 119912 -GCATACTGTGCATGCAAACAGACAGTGAGGGTTTGATTCTGAAAACACAAAGAACAAG s panTro4.chr4 190296230 58 + 193495092 -GCGTACCGTGCATGCAAACAGACAGTGAGGGTTTGATTCTGAAAACACAAAGAACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262183 58 + 198332218 -ACATACTGTGCATGCAAACAGACAGTGAGGGTTTGATTCTGAAAACACAAAGAACAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233810 58 + 115148730 -GCATACTGTGCATGCAAACAGACAGTGAGGGTTTGATTCTGAAAACACAAAGAACAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037335 58 + 184069350 -GCATACTGTGCATGCAAACAGACAGCGAGGGTTTGATTCTGAAAATACAAAGACCAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374513 58 + 189454096 -GCATACTGTGCATGCAAACACACAGTGAGGGTTTGATTCTGAAAATACAAAGACCAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989648 58 + 178775436 -GCATACTGTGCACGCAAACAGACAGTGAGGGTTTgattctgaaaatacaaagacCAAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832434 58 + 135778131 -GCGTACTGTGTATGCAAACAGACAGTGAGGGTTTGATTCTGAAAATACAAAGACCAAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216038 58 - 190850796 -GCACACTGTGCACGCACACAGACAGCGAGGGTCTGATTCTGAAAATGCGGAGAATGAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84702845 57 - 129401213 -GCATCTTGTGCGCACCAATGCACAGTGAGGGTTTGACTCTGAAGATCAGGAGAGTGA- i mm10.chr8 I 767 C 0 s canFam3.chr16 15709831 58 - 59632846 GGCACGCCATG-ATGCAAAGGCACAGCAAGGATTTGCTCCTGAAAACAGGAAAGTCGAG i canFam3.chr16 C 0 I 108 a score=30866.000000 s hg38.chr4_KI270785v1_alt 23778 11 + 119912 TCTGGCTGTAC s panTro4.chr4 190296288 11 + 193495092 TCTGGCTGTAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262241 11 + 198332218 TCTGGCTGTAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233868 11 + 115148730 TCTGGCTATAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037393 11 + 184069350 TCTGGCTGTAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374571 11 + 189454096 TCTGGCTGTAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989706 11 + 178775436 TCTGACTGTAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832492 11 + 135778131 TCTGGCTGAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216096 10 - 190850796 TCTG-CTGAAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84702902 11 - 129401213 TCTCTTTTCAC i mm10.chr8 C 0 C 0 s canFam3.chr16 15709997 11 - 59632846 tctggctctct i canFam3.chr16 I 108 I 108 a score=369348.000000 s hg38.chr4_KI270785v1_alt 23789 109 + 119912 CACACCTCTCCTTAATCCTCTTCATTTCTCTTCTCATCTCTTATTTCCCGCTCAGATTTGAGGCTCGTCGTGTCTCAAGAGCCATGCTTGGTGCCTAAGCAGTAACCAA s panTro4.chr4 190296299 109 + 193495092 CACACCTCTCCTTAATCCTCTTCATTTCTCTTCTCATCTCTTATTTCCTGCTCAGATTTGAGGCTTGTCGTGTCTCAAGAGCCATGCTTGGTGCCTAAGCAGTAACCAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262252 109 + 198332218 CACACCTCTCCTTAATCCTCTTCATTTCTCTTCTCATCTCTTATTTCCTGCTCAGATTTGAGGCTCGTCGTGTCTCAAGAGCCATGCTTGGTGCCTAAGCAGTAACCGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233879 109 + 115148730 CACACCTCTCCTTAATCCTCTTCATTTCTCTTCTCATCTCTTATTTCCCACTCAGATTTGAAGCTCGTCGTGTCTCAAGAGCCATGCTTGGTGCCTAAGCAGTAACCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037404 109 + 184069350 CACACCTCTCCTTCATCCTCTTCATTTCCCTTCTCATCTTTTATTTTCCACTCAGATTGGAGGCTCGTCGTGTCTCAAGAGCCATGCTTGGTGCCTGAGCAGTAACCAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374582 109 + 189454096 CACACCTCTCCTTCATCCTCTTCATTTCCCTTCTCATCTTTTATTTTCCACTCAGATTGGAGGCTCGTCGTGTCTCAAGAGCCATGCTTGGTGCCTGAGCAGTAACCAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989717 109 + 178775436 CACGCCTCtccttcatcctcttcatttcccttctcatcttttatttttcactcagaTTGGAGGCTCGACGTGTCTCAAGAGCCATGCTTGGTGCCTGAGCAGTAACCAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832503 109 + 135778131 CACGCCTCTCCTTCATCCTCTTCATTTCCCTCCTCATCTTTTATTTTCCACTCAGATTGGAGGCTCGACGTGTCTCAAGAGCCATGCTTGGTGCCTGAGCAGTAACCAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216106 109 - 190850796 CACACCGCTCCTTAGCCCTCTGCATTTCTCTTCTCGTCTCTTACTTCCCACTCAGATTTGAGGTTCATCGTGTCTCAAGAGCTGTGCTTGGTACGTAAGCAGTGACAAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84702913 89 - 129401213 TACTGCTCTTTTTAGTCTT-----TGTTTCTTCTCTCCAGTTACTTCAAACT--------AAGCCCATTATACTTC---AGCCACGATC----CCAAAGAAGGAACCGA i mm10.chr8 C 0 I 664 s canFam3.chr16 15710116 108 - 59632846 TACTCTTCTCTTTAATGCTCTCCTCCTTTCTTCTCATC-CTTACTTCCTACTGATACTTGAGGCTCATCATGTCTTAGCAACCATGCTTGTGGCCAGAGCAGCTGCTCC i canFam3.chr16 I 108 C 0 a score=371640.000000 s hg38.chr4_KI270785v1_alt 23898 126 + 119912 GAAATATGGACTTTGCTATTAAAACAGATGTTCTTTag-agggtactagaggctgggaagaggaagggaaaagggagatagggagacattctttaaaggataaaaaattacag--ctagataggatgag s panTro4.chr4 190296408 126 + 193495092 GAAATATGGACTTTGCTATTAAAACAGATGTTCTTTag-agggtactagaggctgggaagaggaagggaaaagggagatagggagacattttttaaaggataaaaaattacag--ctagatagaatgag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262361 127 + 198332218 GAAATATGGACTTTGCTATTAAAACAGATGTTCTTTAGAagggtactagaggctggtaagaggaagggaaaagggagatagggagacattttttaaaggataaaaaattacag--ctagatagaatgag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111233988 124 + 115148730 GAAATATGGACTTTGCTATTAAAAC--ATATTCTTTag-agggtactagaggctgggaagaggaagaaaaaagggagatagggagacattttttaaaggataaaaaattacgg--ctagatagaatgat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037513 126 + 184069350 GAAATGTGGACTTTGCTATTAAAACAGATGTTCTTTag-agggtactagaggctgcggagaggaagggaaaagggagatagggagacattttttaaaggataaaaaattacag--ctcgatagaatgag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374691 125 + 189454096 -AAATGTGGACTTTGCTATTAAAACAGATGTTCTTTag-agggtaccagaggctgcggagaggaagggaaaagggagatagggagacattttttaaaggataaaaaattacag--ctcgatagaatgag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989826 126 + 178775436 GAAATGTGGACTTTGCTTTTAAAACAGATGTTCTTTAG-AGGGTACTAGAGGCTgcaaagaggaagggaaaagggagatagggagacattttttaaaggataaaaaacTACAG--CTAGATAGAATGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832612 126 + 135778131 GAAATGTGGACTTTGCTTTTAAAACAGATGTTCTTTag-agggtactagaggctgcgaagaggaagggaaaagggagatagggagacattttttaaaggataaaaaactacag--ctagatagaatgag i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216215 122 - 190850796 GAAATGTGGACCTTGCTATTTAAAGAGACGTTCTTTag-agggtcttagaggctgggagggggaagggaaaagggagat----agacattttttaaaggatacagaattatag--ctagatggaatgag i calJac3.chr3 C 0 C 0 s canFam3.chr16 15710224 113 - 59632846 -AAACTCGGACTTGACCATTAAGAGGGTCAGCCTTGAT---------------TGAGAAGAGGTGGGAACAAATAACAACAAGACAGTGCCTTTCAGGGCTAATGGAGGCAAGTCCAAGGTAGGACAAG i canFam3.chr16 C 0 I 199 e mm10.chr8 84703002 664 - 129401213 I a score=333164.000000 s hg38.chr4_KI270785v1_alt 24024 134 + 119912 tagtcctggtgttccgcaggtctgtaggatgactatagttaac-aataatacatgat--------atgctttcaaatagctagaaggaggatattgaatgttcccaacacagagaaatgacaaatgtttgagaagataaatac s panTro4.chr4 190296534 131 + 193495092 tagtcctggtattccgcaggtctgtaggatgactatagttagc-aataatacgtgat--------atgctttcaaatagctag---gaggatattgaatgttcccaacactgagaaatgacgaatgtttgagaagataaagac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262488 134 + 198332218 tagtcctggtgttccacaggtctgtaggatgactatagttaac-aataatacatgat--------acactttcaaatagctagaaggaggatattgaatgttcccaacacagagaaatgacaaatgtttgagaagataaatat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111234112 134 + 115148730 tggtcctggtgttccacaggtctgtaggatgactatagttaac-aataatatatgat--------acactttcaaataactagaaggaggatattgaatgttcccaacacagagaaatgacaaatgtttgtgatgataaatat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037639 142 + 184069350 tagtcctggtgttctgcagtgctgtacgatgactgtagttaac-gataatacatgatatcatgaaatgctttcaaatagttagaaggaggatactgaatgttcccaacacagagaaaagataaatgttggagatgataaatat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374816 142 + 189454096 tagtcctggtgttctgcagtgctgtacgatgactatagttaac-gataatacatgatatcatgatatgctttcaaatagttagaaggaggatactgaatgttcccaacacagagaaaagataaatgttggagatgataaatat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175989952 134 + 178775436 TAGTCCTGGTGTTCTGCAGCGCTGTACGATGACTATAGTTAAC-GATGATACATGAT--------ACGCTTTCAAATAGTTAGAAGGAGGATACcgaatgttcccaacacagagaaaagataaatgtttgagatgataaatgt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832738 134 + 135778131 tagtcctggtgttctgcagtgctgtaggatgactatagttaac-gataatacatgat--------acgctttcaaatagttagaaggaggatactgaatgttcccaacacacagaaatgacaaatgtctgagatgataaatat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216337 127 - 190850796 tagttctagtgttccatagtactgcagg-tgac--tagtcggcaaacactgtgtg----------acactttcaaacagtgaa---gagaatgctgagtgttcccaacacagagaaatgacaaatctttgagatgataaatat i calJac3.chr3 C 0 I 313 e canFam3.chr16 15710337 199 - 59632846 I e mm10.chr8 84703002 664 - 129401213 I a score=108530.000000 s hg38.chr4_KI270785v1_alt 24158 40 + 119912 actaattaccctgatcttatcactatacattgtatgtatc s panTro4.chr4 190296665 40 + 193495092 actaattaccctgatctgatcactatacattgtatgtatc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262622 40 + 198332218 gctaattaccctgatttgatcactatacattgtatgtatc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111234246 40 + 115148730 gctaattaccctgatctgatcactatacattgtatgtatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037781 40 + 184069350 gctaattaccctgatctgatcagtatatgttgtacatatc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374958 40 + 189454096 gctaattaccctgatctgatcagtatatgttgtacatatc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175990086 40 + 178775436 gctaattaccctgatctgatcagtATATGTTgtacatatc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832872 40 + 135778131 gctaattaccctgatctgatcactatacgttgtacatatc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216777 39 - 190850796 gctaattaccctgatgtgaccagtataag-tgtacatatc i calJac3.chr3 I 313 C 0 e canFam3.chr16 15710337 199 - 59632846 I e mm10.chr8 84703002 664 - 129401213 I a score=230556.000000 s hg38.chr4_KI270785v1_alt 24198 88 + 119912 a-----tcactatgtatcccatgaacattatgtgccaattaaaaaaaTAAAAGAAAATATTTTTAAAAGGGGATGCTCTTTGTTAAGAAGAGA s panTro4.chr4 190296705 93 + 193495092 aaaacatcactatgtatcccatgaacattatgtgccaattaaaaaaaTACAATAAAATCTTTTTAAAAGGGGATGCTGTTTGTTAAGAAGAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262662 88 + 198332218 aaaacatcactatgtatcccatgaatattatgtgccaattaaaaaaaTAAAGGA-----TTTTTAAAAGGGGATGCTCTTTgttaagaagaga i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111234286 90 + 115148730 aaaacatcactttgtatcccatgaatattatgtgccaattaaaaaaa---aaTAAAATATTTTTAAAAGGGGATGCTGTTTgttaagaagaga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037821 92 + 184069350 aaaacatcactatgtatcccatgaatattacgtgccaattaaTACaataaaataaaatatttttaaaa-GGGATGCTCTTCGTTAAGAAGAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186374998 92 + 189454096 aaaacatcactatgtatcccatgaatattacgtgccaattaaTACAATAAAATAAAATATTTTTAAAA-GGGATGCTCTTCGTTAAGAAGAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175990126 87 + 178775436 aaaacatcactatgtatccCATGAATATTACGTaccaatt-----aataaaataaaatatttttaaaa-gggatgCTCTTCGTTAAGAAGAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132832912 92 + 135778131 aaaacatcactgtgtatcccatgaatattacgtgccaattaataaaaTAAAATAAAATATTTTTAAAA-GGGATGCTCTTCGTTAAGAAGAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216816 88 - 190850796 aaaacatcaccatgtatcccatgaatattttgtgtcaattaaaaaaataaAATA-----TTTTTCAAAGGGGATGTTCCTCATTAAGAAGAGA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15710536 51 - 59632846 -----ctctctgtgtctctcatgaata------------------aataaattgaaa-------aaaa------------tcttaaaaaaaaa i canFam3.chr16 I 199 C 0 e mm10.chr8 84703002 664 - 129401213 I a score=320533.000000 s hg38.chr4_KI270785v1_alt 24286 108 + 119912 GATGGAAATGAAAGATGTCAGTATAGTGCATTTAAGTACTACTGGAAGATGTTTAAAGCATGACgggatccttgagatggaacgtctaattctaggggggtggatttt s panTro4.chr4 190296798 107 + 193495092 GATGGAAATGAAAGATGTCAACACAGTGCATTTAAGTACTACTGGAAGATGTTTAAAGCATGACgggatccttgagatggaacgtctaattctaggggg-tggatttt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262750 107 + 198332218 gatgggaataaaagatgtcaatacagtgcatttaagtactactggaagatgtttaaagcatgacgggatccttgagatggaacgtctaattctaggggg-tggatttt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111234376 107 + 115148730 gatgggaataaaagatgtcaatacagtgcatttaagtactactggaagatgtttaaagcatgatgggatccttgagatagaacgtctaattctaggggg-tggatttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181037913 107 + 184069350 GATGGGAATAAAAGATGTCAATACAGTGCATTTAATTACTACTGGAAGACGTTTAAAGCATGACgggatccttgagatggaacgtctaattctaggggg-tggatttt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186375090 107 + 189454096 GATGGGAATAAAAGATGTCAATACAGTGCATTTAATTACTACTGGAAGACGTTTAAAGCATGACgggatccttgagatggaacgtctaattctaggggg-tggatttt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175990213 107 + 178775436 GATGGGAATAAAAGATGTCAATACAGTGCATTTAATTACTACTGGAAGACGTTTAAAGCATGACGGGATCCTTGAGATGGAACGTCTAATTCTAGGGGG-TGGATTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132833004 107 + 135778131 GATGGGAATAAAAGATGTCAATACAGTGCATTTAATTACTGCTGGAAGACGTTTGAAGCATGACAggatccttgagatggaacgtctaattctaggggg-tggatttt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188216904 105 - 190850796 GAGGGGAATAAAAGACGTCA-TACAGAGCATTTAAGTACGACTGGAGGATGTTTAAAGCATG-CAGGACCCTCGAGATGGAACGCCCGATTCCAGGGGG-TGGATTTT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15710587 0 - 59632846 C e mm10.chr8 84703002 664 - 129401213 I a score=2444788.000000 s hg38.chr4_KI270785v1_alt 24394 784 + 119912 aa-ggatgttcaaagagaaggtgacatttacgcagaattttgaaggacaactagtagtttgccaagtatatggttcctggggttcaagggtagctttggagagaggagaaagcaTTCTAAGCAGATAAATAGCACATGTGCATGTAAACAA-----GAGTGGAAATGCATCGGGAA-CCCAGGACACTGCGGGACTGTGGTATGGAAAGGGAGAGCTACAGGCAGAAATCAGGCTGAAAGGTTGGGGAGTGAGAGGGTAATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTAGGGGCGCCTGCCCAAGACATGCCTTTTTACAGGGGCTGCCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------AACATGCCTGTCTCTGGCTGTCCC-TGGCTAGAGCTGATTGGACAAGGGTTGGTTCTGTAATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAGCGTAAGACTTGTCTTCCAAAATATGAACTAAAGGTCTGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-ACCGAGAGCAGGGGCTGAAGCAGCTCTTCT-------CCACCTCCTGAAGTAC----AGCTGAGCAGGTCTGTAGAGAGAAGCAC-----------AGGCACTCAGGGA-AAGTGGAGAC--GAGGCCATGC--------------GAGTCATGAGTGGGGC--------------------------------GTTGGTGGTGCACTTCCTGCTTTGTGTGCCATAGGATAGCTCTGTAGACTTTCATAAATACCCCTTT--TAGGGAGACTCCATTTGCGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATgccattct s panTro4.chr4 190296905 785 + 193495092 aa-ggatgttcaaagagaaggtgacatttacgcagaattttgaaggacaactagtagtttgccaactatatggttcctggggttcaagggtagctttggagagaggagaaagcaTTCTAAGCAGATAAATAGCACATGTGCATGTAAACAA-----GAGTGGAAACGCATCGGGAA-CCCAGAACACTGCGGGACTGTGGTATGGAAAGGGAGAGCTACAGGCAGAAATCAGGCTGAAAGGTTGGGGAGTGAGAGGGTAATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTAGGGACACCTGCCCAAGACATGCCTTTTTACAGGGGCTGCCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------AACATGCCCGTCTCTGGCTGTCCCCTGGCTAGAGCTGATTGGACAAGGGTCGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAGCGTAAGATTTGTCTTCCAAAATATGAACTAAAGGTCTGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-ACCGAGAGCAGGGGCTGAAGCAGCTCTTCT-------CCACCTCCTGAAGTAC----AGCTGAGCAGGTCTGTAGAGAGAAGCAC-----------AGGCACTCAGGGA-AAGCGGAGAC--GAGGCCATGC--------------GAGTCATGAGTGGGGC--------------------------------GTTGGTGGTGCACTTCCTGCTTTGTGTGCCATAGGATAGCTCTGTAGACTTTCATAAACACCCCTTT--TAGGGAGACTCCATTTGCGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATgccattct i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195262857 796 + 198332218 aa-ggatgttcaaagagaaggtgacatttatgcagaattttgaaggacaactagtagtttgccaagtatatggttcctgggggtcaagggtagctttggagagagcagaaagcattctaagcagataaatagcacatgtgcatgtaaacaa-----gagtggaaatgcatcgggaa-cccaggacactgtgggactgtggtatggaaagggagagctacaggcagaaatcaggctgaaaggtTGGGGAGTGAGAGGGTAATAAAAGCTCTGCTTGTTGCAATGTACTCAAATTTAGGGGCACCTGCCCAAGACATGCCTTTTTATGGGGGCTGCCCATCATTC-TAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------AACATGCCTGTCTCTGGCTGTCCC-TGGCTAGAGCTGATTGGACAAGGGTTGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAGCATAAGACTTCTCTTCCAAAATATGAACTAAAGGTCTGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-AGCGAGAGCAGGGGCTGAAGCAGCTCTTCT-------CCACCTCCTG-AGTAC----AGCTGAGCAGGTCTGTAGAGAGAAGCAC-----------AGGCGCTCAGGGA-AAGCAGAGGT--GAGGCCATGCGAGTCACGAGCGGGGAGTCATGAGCGGGGT--------------------------------GTTGGTGGTGCACTTTCTGCTTTGTGTGCCTTAAGATAGCTCTGTAGACTTTCATAAACACCCCTTT--TAGGGAGCCTCCATTTGCGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATgccattct i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111234483 780 + 115148730 aa-ggatgttcaaagagaaggtgacatttacacaaaattttgaaggacaactagtaatttgccaagtatatggttcctggggttcaagggtagctttggagagaggagaaagcattctaagcagataaatagcacatgtgcatgtaaacaa-----gagtggaaacgcatcgggaa-cccaggacaatgtgggactgtggtatggaaagggagagctagaggcagaaatcaggctgaaaggtTGGGGAGTGAGAGGGTAATAAAGGCTCCGCTTGTTGCAATGTGCTCAAATTTAGGGGCACCTGCCCAAAACATGCCTTTTTACAGGGGCTGCCCATCATTCACAGCCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------AACATGCCTGTCTCTGGCTGTCCC-TGGCTAGAGCTGATTGGACAAGGGTTGGTTCTGTGATCTTGGAGGAATCTAATAATAGACCTGGCTGAAACAAGCTTAAGACTTGTCTTCCAAAATATGAACTAAAGGTCTGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-ACCGAGAGCAGGGGCTGAAGCAGCTCTT----------CACCTCCTGAAGTAC----AGCTGAGCAGGTCTGTAGAGAGAAGCAC-----------AGGCACTCAGGGA-AAGCAGACAC--GAGGCCATGC--------------GAGTCATGCGC-GGGC--------------------------------GTTGCTGGTGCACTTCCTGCTTTGTGTGCCCTAGGATAGCTCTGTAGACTTTCATAAACACCCCTTT--TAGGGAGACTCCATTTACGTTCTTTGCAAACAAATGCACTGCTGTAAAATACaagccattct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181038020 781 + 184069350 aa-ggatgttcaaagagaaggtgatatttacgcagaattttgaaggacaactagtagtttgccaagtATATGGTTCCTGGGGCTC--GGGTAGCTTTGGAGAGAGAGGAAAGCGTTCTAAGT-GATAAATAGCACATGTGCACGTAAACAA-----GAGTGGAAACGCACTGGGAA-CCCAGGACACTGCGGGACTGTGGTATGGAAAGCGAGAGCTAGAGGCGGGAATCATGCTGAAAGATTGGGGAGTGAGAGGGTCATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTGGGGGAACCTGCCCAAGACATGCCTGTTTTGGGGGCCTGTCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------ACCATGCCTGTCTCTGGCTGTCAC-TGGCTAGAGCTGATTGGACAAGTGTTGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAACATAAGACTTGTCTTCCAAAATATGAACTAAAGGTCCGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-GCCGAGAGCAGGGATGGAGGCAGCTCTTCT-------CCACCTCCTGAAGTAG----AGCTGAGCAGGTCTGCAGAGAGAAGCAC-----------AGGTGCTCAGGGA-AAGCAGAGAC--GAGGCCATGC--------------GAGTCATGAGCGGGGC--------------------------------ATTGGTGGTGCACTTCCTGCTTTGTGTGCCGTAAGCTCGCTCTGTGGACTTTCATAAACACCTCTTT--TAGGGAGACTCCATTTATGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATgccattca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186375197 781 + 189454096 aa-ggatgttcaaagagaaggtgatatttacgcagaattttgaaggacaactagtagtttgccaagtATATGGTTCCTGGGGCTC--GGGTAGCTTTGGAGAGAGAGGAAAGCGTTCTAAGT-GATAAATAGCACATGTGCACGTAAACAA-----GAGTGGAAACGCACTGGGAA-CCCAGGACACTGCGGGACTGTGGTATGGAAAGCGAGAGCTAGAGGCAGGAATCATGCTGAAAGATTGGGGAGTGAGAGGGTCATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTGGGGGAACCTGCCCAAGACATGCCTGTTTTGGGGGCCTGTCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------ACCATGCCTGTCTCTGGCTGTCAC-TGGCTAGAGCTGATTGGACAAGTGTTGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAACATAAGACTTGTCTTCCAAAATATGAACTAAAGGTCCGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-GCCGAGAGCAGGGATGGAGGCAGCTCTTCT-------CCACCTCCTGAAGTAG----AGCTGAGCAGGTCTGCAGAGAGAAGCAC-----------AGGTGCTCAGGGA-AAGCAGAGAC--GAGGCCATGC--------------GAGTCATGAGCGGGGC--------------------------------ATTGGTGGTGCACTTCCTGCTTTGTGTGCCGTAAGCTAGCTCTGTGGACTTTCATAAACACCTCTTT--TAGGGAGACTCCATTTATGTTCTTTGCAAACAAATGCACTGCTGTAAAATACACgccattca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175990320 780 + 178775436 AA-GGATGTTCAACGAGAAGGTGATATTTACGCAGAATTTTGAAGGACAACTAGTAGTTTGCCAAGTATATGGTTCCTGGGGCTC--GGGTAGCTTTGGAGAGAGAGGAAAGCGTTCTAAGT-GATAAATAGCACATGTGCGTGTAAACAA-----GAGTGGAAACGCACTGGAAA-CCCAGGACACTGCGGGACTGTGGTATGGAAAGCGAGAGCTAGAGGCAGGAATCATGCTGAAAGGTTGGGGAGTGAGAGGGTCATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTGGGGGAACCTGCCCAAGACATGCCTGTTTTGGGGGCCTGTCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------ACCATGCCTGTCTCTGGCTGTCAC-TGGCTAGAGCTGATTGGACAAGTGTTGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAACTTAAGGCTTGTCTTCCAAAATATGAACTAAAGGTCCGATTGGTGTGTGATGGATGTGTGAGCAGAGGT-GCCGAGAGCAGGGATGGAGGCAGCTCTTCT-------CCACCTCCTGAAGTAG----AGCTGAGCAGGTCTGCAGAGAGAAGCAC-----------AGGTGCTCAGGGA-AAGCAGAGAC--GAGGCCATGC--------------GAGTCATGAGCGGGG---------------------------------ATTGGTGGTGCACTCCCTGCTTTGTGTGGTGTAAGCTAGCTCTGTGGACTTTCATAAACACCTCTTT--TAGGGAGACTCCATTTATGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATGCCATTCa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132833111 786 + 135778131 aa-ggatgttcaaagagaaggtgatatttacgcagaattttgaaggacaactagtagtttgccaagtATATGGTTCCTGGGGCTC--GGGTAGCTTTGGAGAGAGAGGAAAGCGTTTTAAGT-GATAAATAGCACATGTGCATGTAAACAA-----GAGTGGAAACGCACTGGGAA-CCCAGGACACTGTGGGACTGTGGTATGGAAAGTGAGAGCTAGAGGCAGGAATCATGCTGAAAGGTTGGGGAGTGAGAGGGTCATAAAGGCTCTGCTTGTTGCAATGTACTCAAATTTGGGGGAACCTGCCCAAGACATGCCTGTTTTGGGGGCCTGTCCATCATTCACAACCTTGCTGGAGATGTGAGCCAAGTT----------------------------------------------------------------------ACCATGCCTGTCTCTGGCTGTCAC-TGGCTAGAGCTGATTGGACAAGTGTTGGTTCTGTGATCTTGGAGGAATCTAACAATAGACTTGGCTGAAACAAACATAAGACTTGTCTTCCAAAATATGAACTAAAGGTCCGATTGGTGTGTGATGGATGTGTAAGCAGAGGT-GCCGAGAGCAGGGATGGAGGCAGCTCTTCT-------CCACCTCCTGAAGTAGAGCTAGCTGAGTAGGTCTGCAGAGAGAAGCAC-----------AGGCGCTCAGGGA-AAGCAGAGAC--GAGGCCATGC--------------CAGTCATGAGCAGGGC-------------------------------GTTTGGTGGTGCACTTCCTGCTTTGTGTGCCGAAAGATAGCTCTGTAGACTTTCATTAACACCCCTTT--TAGGGAGACTCCCTTTATGTTCTTTGCAAACAAATGCACTGCTGTAAAATACATGCCGTTCA i chlSab2.chr7 C 0 I 319 s calJac3.chr3 188217009 852 - 190850796 AAGGGATGTTCAAAGAGAAGGTGACATTAATGCACAATTTTGAAGGACAACTAGTA-TTTGTCAGGTATATGGTTCCCAGGGTTTGAGGGTAGCTTTGCAGAGAGGAGAAAGTATTCTAAGCAGATAAATAGCACATGCGAATGAGAACAA-----GAGTGGAAGTGCGTGGGGAATCCCAGGACACAGCAGGACTGT-GCACAGAGAGGGAGAGCTAGAGGCAGGAATCAGGCCGAAAGGCTGGGG-GTGAGAGGGTAACAAAGGCTCTGCTTGGTGCAGTATACTGAAATTTGGGGGCACCTTCCCAAGACATGCCT-TTTATGGGTCCTGCCCATCATTCACAACCTTGCTGGAGATGTGGGCCAAGTCTGCATTcctgtccctgcctggccctgcctggctctggctgtccctgcctgtccctgcctggtcctggctgaccctgcctgtccctgcctggccc-tggctggAGCTGATTGGACAAGAGTTGGTTCTGTGCTCTTCGAGGAATCCAACCATACACTTGGCTGAAACAAGCATAAGACTTGTGTTCCCAAATATGAAGTAAAGGTCCTATTGGTGTGGGATAAATGTGTGGGCAGAGGT-CCCGAGAGCAGGGGCTGAGGCAGCCCTTCC-------CCACCTCCTGAGGGAG----AGCTGAGCTGGTCTGCAGAGAGAAACAC-----------AGGCACTCCGGGA-AAGCAGAGAC--GAGACCTCGC--------------GAGTTGTGAGCGGGGC--------------------------------ACTGGGGGTGCACCTCCTGCCTCGTGGGCCCTAAGATAGCTCTGTAGACCTTAATAAACACCCCTTT--TAGAAAGACTCTGTTTATGTTCTTTGCAAACAGATGCACTGCTATGAAATATATTCCTTTCt i calJac3.chr3 C 0 C 0 s canFam3.chr16 15710587 800 - 59632846 AA-CAACCCACAAAgaggaggtgacatttgtgaagaattttgaaggatgactatt-gcttgccaggtgtgttgttctaggag------------tctggagagaggaaaagatatcctagacagacacagagcctgtgtgaacataaaaaccaggtgagaagaaacaaa---agaa-ttcaggacactataggactgcagtatg----gggagagttagagctggaaatgaggtttaaaaggcagatatggggcagatAGGAAAAGCTTTGCTTATTGCACTATCTT--AACTTGGGGGCACCTGCT--GGATGTTTCT---------GCATCCCCATCATTTACAACCTTGCTGCAGGTGTGAGTCAAGTT----------------------------------------------------------------------AACGTGTTtgtccttggctgtcct-tggccacagctgattggacaaaaggtggttacatgaccccagaagaa-ccaaccACTGAGTAAACTGAGCCCATTAAATGACTTCTAATAAAAAATATGAACAAAGAGTCATATTGGCATGTGATGGGTATGTGAGCAGAAGTCACTTGCAGCTGGGACTG-TGCGGCCCTTCTTCCCAGCCTTCCTTCCAAAGTAG----AGCT-CGTGGATCTACAGAGAGAAACACACTAACAGAATAGGGGCTCAGAGAGAAGCAGAGACCTGACACCATGT--------------GACTCAGGGGAGAGGTTCTTTTTTTTTTTTTTTTTTTAGGGGAGAGGTTCTTGAGGTG-ACTCCCCCTTCTGTGTGCCATGAGATACCACTGTAACTTTTAATAAATACCCCTTTGGGGGGGGGAGTCAATTTATATTCTTTGCAAACAA--------CCCTAAAATGGATGGTCTTCT i canFam3.chr16 C 0 C 0 e mm10.chr8 84703002 664 - 129401213 I a score=1248070.000000 s hg38.chr4_KI270785v1_alt 25178 407 + 119912 aaagagtttgga-ttttatcctgtcagtatggggaatccatgaaaaatattaagc-agggttaacatag-----attcattgtgttgtcttataaattaacttgactgcaacttgaagaatagttcagagaggagcaaaatc---aggagaggaaaacgctaggaggccatgggaacaatctggacaaAGCCTGACACATCCCTCAGCTGAGGAGAGGCCTGGGGGAAGAGAGAGTC-TAGATCTAAG-GACATCTAGAGAGCCCCAGCTGAAGGA-CTTGTGAATGAGTGTTGCCGAGGCTACAGGTT----G--GGTGGGT-ATTGGCTCGCTTGTGGGACTGGCATATTGGTAGACGTGGTAA-AACTTTAGAAGGAAAGAGATGTGCAAGTG-AAAAAAATGAGATTCATTTCAGAGACATTGAG s panTro4.chr4 190297690 407 + 193495092 aaagagtttgga-ttttatcctgtcagtatggggaatccatgaaaaatattaagc-agggttaacatag-----attcattgtgttgtcttataaattaacttgactgcaacttgaagaatagttcagagaggagcaaaatc---aggagaggaaaatgctaggaggccgtgggaacaatctggacaaAGCCTGACACATCCCTCAGCTGAGGAGAGGCCTGGGGGAAGAGAGAGTC-CAGATCTAAG-GACATGTAGAGAGCCCCAGCCGAAGGA-CCTGTGAATGCGTGTTGCCGAGGCCACAGGTT----G--GGTGGGT-ATTGGCTCGCTTGTGGGACTGGCATATGGGTAGACGTGGTAA-AACTTTAGAAGGGAAGAGATGTGCAAGTG-AAAAAAATGAGATTCATTTCAGAGACATTGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195263653 405 + 198332218 aaagagtttgga-ttttatcctgtcagtatggggaatccatgaaaaatattaagc-agggttaacatag-----attcattgtgttgtcttataaattaacttcactgcaac---atgaatagttcagagaggagcaaaatc---aggagaggaaaatgctaggaggccatgggaacaatctggacaaAGCCTGACAAATCCCTCAGCTGAGGAGAGGCCTGGGGGAAGAGAGAGTC-TACATCTAAG-GACATTTAGAGAGCCCCAGCCGCAGGA-CCTGTGAATGAGTGTTGCCGAGGCTACAGGTT----G--GGTGGGTAATGGGCTCGCTTGTGGGACTGGCCTATTGGTAGACATGGTAA-AACTTTAGAAGGAAAGAGATGTGCAAGTG-AAAAAGATGAGATTCATTTCAGAGACATTGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111235263 408 + 115148730 aaagagtttggg-ttttattctgtcagtatggggaatccatgaaaaatattaagc-agggttaacatag-----attcattgtgttgtcttataaattaacttgactgcaacatgaagaatagttcagagaggagcaaagtc---aggagaggaaaatgctaggaggccatgggaacaatctggacaagGCCTGACAAATCCCTCAGCTGAGGAGAGGCCTGGGGGAAGAGAGAGTC-TAGATCTAAG-GACATTTAGAGAGCCCCAGCCGAAGGA-CCTGTGAATGAGTGTTGCCCAGGCTACAGGTT----G--GGTGGGTAATGGGCTCGCTTGTGGGACTGGCATATTGGTAGACATGGTAA-AACTTTAGAAGGAAAGAGATGTGCAAGTG-AAAAAAATGAGATTCATTGCACAGACACTGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181038801 403 + 184069350 aaagagtttgga-ttttatcctgtcagtgtgggaaatccgtgaaaaatagtaagc-ggggttaacctag---------attgtgttgtcttataaattaacttgactgcaacatgaagaatcgttcagagaggagcaaaatc---aggagaggagaatgctgggaggccatgggaacactctggcccaggcctgacaaatccctgagccgaggagaggcctgggggaagagacagtc-tggatctaagacacatttagagaaccgcagccgaagga-CCTAGGAATGAGTGTAACTGAGGCTACAGGTT----G--GGTGGTTGATGGGCTCGCTTGTGGGACTGGCGTGTTGGTAGCTACGATAA-AAC--CAGAAGGAAAGAGATGTGCAAGTG-AAAAAAATGACATTCATTTCAGAGACATTGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186375978 403 + 189454096 aaagagtttgga-ttttatcctgtcagtgtgggaaatccgtgaaaaatattaagc-agggttaacctag---------attgtgttgtcttataaattaacttgactgcaacatgaagaatcgttcagagaggagcaaaatc---aggagaggaaaatgctaggaggccatgggaacaatctggaccaggcctgacaaatccctgagccgaggagaggcctgggggaagagacagtc-tagatctaagagacatttagagaaccgcagccgaagga-cctgtgaatgAGTGTAACTGAGGCTACAGGTT----G--GGTGGTTGATGGGCTCGCTTGTGGGACTGGTGTGTTGGTAGCTACGATAA-AAC--CAGAAGGAAAGAGATGTGCAAGTG-AAAAAAATGACATTCATTTCAGAGACATTGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175991100 403 + 178775436 aaagagtttgga-ttttatcctgtcAGTGTGGGAAATCCGTGAAAAATATTAAGC-AGGGTTAACCTAG---------ATTGTGTTGTCTTATAAATTAACTTAACTGCAACATGAAGAATCGTTCAGAGAGGAGCAAAATC---AGGAGAGGAAAATGCTAGGAGGCCATGGGAACAATCTGGACCAGGCCTGACAAATCCCTGAGCTGAGGAGAGGCCTGGGGGAAGAGACAGTC-TAGATCTAAGAGACATTTAGAGAACCCCAGCCGAAGGA-CCTGTGAATGAGTGTTACTGAGGCTACAGGTT----G--GGTGGGTGATGGGCTCGCTTGTGGGACTGGCATGTTGGTAGCTAcgataa-aac--cagaaggaaagagatgtgcaagtg-aaaaaaatgagattcatTTCAGAGACATTGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132834216 403 + 135778131 aaagagtttgga-ttttatcctgtcagtgtggggaatccgtgaaaaatattaagc-agggttaacctag---------attgtgttgtcttataaattaacttgactgcaacatgaagaatcgttcagagaggagcaaaatc---aggagaggaaaatgctaggaggccatgggaacaatctggaccagGCCTGACAAATCCCTGAGCTGAGGAGAGGCCTGGGGGAAGAGACGGTC-TAGATCTAAGAGACGTTTAGAGAACCCCAGCCGAAGGA-CCTGTGAATGAGTGTAACTGAGGCTACAGGCT----G--GGTGGTTGATGGGCTCGCTTGTGGGACTGGCGTATTGGTAGCCACGATAA-AAC--CAGAAGGAAAGAGATGTGCAAGTG-AAAAAAATGAGATTCATTTCAGAGACATTGAG i chlSab2.chr7 I 319 C 0 s calJac3.chr3 188217861 410 - 190850796 aaagagtttgggtttttaccctgtaaatatggggaatccgtg--acatattaagc-agggttaacgtgg-----atttattgtgttgtcttagaaattaacttgactgtaacatgaagaatagttcagagaggagcaaaatc---aggagaaaaaaattctaggaggccatgggaacaatctgggcgagggctgacagATTCCTGAGCCGAGGACAACCCCTGGGG-CGAGAGAGTCTTATATCTAAGAGGCATTTAGAGATCCCCAACCCGAGGA-GCTGGGAACGAGTGTTGCCAAGGCTCCAGGCT----GCAGGATGGTGATGAGCTTGCTGGTCGGACTGGCATATTGGTAGTCATGCTAA-AACTTTAGAAGGAAATAGGTGTGCAAGTG-ATAAAAAGGAGATTCATTGCAGAGACACTGAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15711387 420 - 59632846 AAAGAGTTTGCA--TTTATATTGCAGGTTAGGAGAAACTATACAAAGTACTAAGTGAGGGGTAGCATAATCAGGATTTATTTTGTTTTC--ATAAAGCAACTTGGCTACAACGTGGAGAGTGGTTCAGAGAGGATTCAAATCAGAAGGAGAGAAACATCCCAGGAATCCATGGGAATGATCTGGGCAAGAGCTGAGGAATTCCTGAACTAAGGGAAGGACACGAGGA--AGATAATA-TAGAGTTAAGAGGTATTTAAAAAGCCTAGACAAAAGGACCCTGTGAATGACCGTTGTCAAGGATAAAGGATAGAAG--GATGGATGATGAATTAGCTTGTGTGAATAGCAAACTGGTAATCGTGGTAAGAGCTTTAGAAGGAGATAGATTCGTAAGGGAAAAAAAATGAGAGCAGTTTCAGAGACTTTGAG i canFam3.chr16 C 0 C 0 e mm10.chr8 84703002 664 - 129401213 I a score=749728.000000 s hg38.chr4_KI270785v1_alt 25585 249 + 119912 GCACATACAGGATATTCTTATGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTGCCACATGCAAATGGGCGTTGAAACAAT-GGGTGTGAAAGTGATTGCCTGTGAGGAGCAAGTG-----GAATGTGGAACACAAAAGTCTAAAACAGAGCTGGGAAG-AA-GGCATTCCTCAAGGAGCGGGCA--------------GAAAA------G-GCTGAGAAGGGGTGAAT----------TGGAGAA---CAAAGCCAGCAGAGCAGC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGGTTTCA s panTro4.chr4 190298097 249 + 193495092 GCACATACAGGATATTCTTACGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTGCCACATGCAAATGGGCGTTGAAACAGT-GGGTGTGAAAGTGATTGCCTGTGAGGAGCAAGTG-----GAATGAGGAACGCAAAAGTCTAAAACAGAGCTGGGAAG-AA-GGCATTCCTCAAGGAGCGGGCA--------------GAAAA------G-GCTGAGAAGGGGTGAAT----------TGGAGAA---CAAAGCCAGCAGAGCAGC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGGTTTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195264058 250 + 198332218 GCACATACAGGATATTCTTACGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTTCCACATGCAGATGGGAGTTGAAACAAT-GGGTGTGAAAGTGATTGCCTGTGAGGAGCAAGTG-----GAATGAGGAACACGAAAGTCTAAAACAGAGCTGGGAAG-AA-GGCATTCCTCAAGGAGTGGGCA--------------GAAAA------ATGCTGAGAAGGGGTGAAT----------CAGAGAA---CAAAGCCAGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGGTTTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111235671 249 + 115148730 GCATATACAGGACATTCTTATGGAGTTACAGGCTCCAAGGAACGTTCTGGGCTTCCACATGCAGACAGGAGTTGAAACAAT-GGGTGTGAAAGTGATTGCCTGTGAGGAGCAAGTG-----GAATGAGGAACACGAAAGTCTAAAATAGAGCTGGGAAG-AA-GGCATTCCTCAAGGAGCAGGCA--------------GAAAA------G-GCTGAGAAGGGGTGAAT----------CAGAGAA---CAAAGCCAGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGGTTTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181039204 250 + 184069350 GCACATAGAGTATATTCTTAAGGAGTTACAGGCTCCAAGGAAAGTTCTGGGCTTCCACATGCAGACGGGAATTGAAACAAT-GAGTGTGAAACTGATTTCCTATGGGGAGCAAGTG-----GAATGAGGAACGCGAAAGTCGGAAACAGAGCTGAGAAG-GC-GGCGTTCCTCAAGGAGCGGGCA--------------GAAAA------AGGCCCAGAAGGGGTGAAT----------CAGAGAA---CAAAGCCGGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGCTTTCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186376381 250 + 189454096 GCACATAGAGTATATTCTTAAGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTTCCACATGCAGACGGGAATTGAAACAAT-GAGTGTGAAACTGATTTCCTATGGGGAGCAAGTG-----GAATGAGGAACGCGAAAGTCTGAAACAGAGCTGAGAAG-GC-GGCGTTCCTCAAGGAGCGGGCA--------------GAAAA------AGGCCCAGAAGGGGTGAAT----------CAGAGAA---CAAAGCCGGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGCTTTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175991503 250 + 178775436 GCACATAGAGTATATTCTTAAGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTTCCACATGCAGACGGGAATTGAAACAAT-GAGTGTGAAACTGATTTCCTATGGGGAGCAAGTG-----GAATGAGGAACGCGAAAGTCTGAAACAGGGCTGAGAAG-AA-GGCATTCCTCAAGGAGCGGGCA--------------GAAAA------AGGCTGAGAAGGGATGAAT----------CAGAGAA---CAAAGCCAGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGCTTTCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132834619 250 + 135778131 GCACATAGAGTATATTCTTAAGGAGTTATAGGCTCCAAGGAAAGTTCTGGGCTTCCACATGCAGACGGGAATTGAAACAAT-GAGTGTGAAACTGATTTCCTATGGGGAGCAAGTG-----GAATGAGGAACGCGAAAATCCGAAACAGAGCTGAGAAG-AA-GGCATTCCTCAAGGATCAGGCA--------------GAAAA------AGGCTGAGAAGGGGTGAAT----------CAGAGAA---CAAAGCCGGGAGAGCACC-A--TCAGAG-----AAAAAAGTG----------------------------------------------TGCTTTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188218271 238 - 190850796 GCCCATGTAGGATATTCCAGTGGAGGGATAGCTTCCAAGGAAAGTTCTAGGCTTCCACATGCAGACGGCAGTTGAAGCAAT-GGGTGTGAAAGCGATTGCCT-TGAGGGACAAGTG-----GGGTGAGGCACACAAAAGTCTAAACCGGAGCTGGGAAG-AA-AGCAGTACCCAAGGGAAGGGCA--------------GAAAA------AGGCTGAGAAGGGGCGAAT----------GAGAGGA---CAGAGCCAGGAGAGCAGC-A--TCAGAG-----AAAAAA--------------------------------------------------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84703666 265 - 129401213 gcatatacaaactatc-----------acaGGCATCATGGGAAGTTCAGGGTTTTCCCAGAAGGATGGTGGTTAAAACAGCGGGGTATGGAA--GATTGCGTCCTGGGAGTAAGTGTCACAAAGGAAGTAGCACAAAGATTCAAAATAGAACTAGGAAGTGC-AACAATAAGTAAGATAGAAGCA--------------GAAAATTAAACAGGAATAGAGGAAATGAATGGTTAAGAGGTAGAGGA----AACACCAGCAGAACACTGG--TCAGAGCATATAAAATAGCA----------------------------------------------TGCGTACA i mm10.chr8 I 664 I 70 s canFam3.chr16 15711807 291 - 59632846 GAATGCATAGGACACTCCCAAGGAGTGAGAG-CTCCCAGGAAAGTTCTGGGCTTCTAGAGACTTATGGTAGTTGAAATAAT-----------------------GGGAAGTAAGTG-----GCATAAGGAGTAT-AAAGTATAAAACAGAACTCAGAAG-AACAGCAGTGCTCAAGGCACAGGCAGAAATATGAACTGGGAAAA------AGACTGAGAACGAATGAAG----------AAGAGAGAAGAAAAGCCAG-AGAACAAT-AGTTGGGGG-----AAAAAAACAATGTATCGTGAAcctgactggctcagtcggaagagcatgagactcttggtctta i canFam3.chr16 C 0 I 125 a score=888647.000000 s hg38.chr4_KI270785v1_alt 25834 280 + 119912 AAAGAAAGAGTCAAATGGTGCAGCACAGTCAATGAATGTAAGAGGTGGATTAAGACGTTTCA-AGGCCATGCTGGACTCTGGCA--CAAGGCGTGCCAGGCTCTAAGGCGC-AACAGCCCAGGCTGGCCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGAGGTCACCTGCGGTGGCGGGGCAGGGGGGTGC-GGGGGGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGCTTTTAGGGATTTGTTAAACACTGTACATATTCTCAAGTCTGGGGACttttt s panTro4.chr4 190298346 280 + 193495092 AAAGAAAGAGTCAAATGGTGCAGCACAGTCAATGAATGTAAGAGTTGGATTAAGACGTTTCA-AGGCCATGCTGGACTCTGGCA--CAAGGCGTGCCGGGCTCTAAGGCGC-AACAGCCCAGGCTGGCCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGAGGTCACCTGCGGTGGCGGGGCAGGGGGGTGC-GGGGGGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGCTTTTACGGATTTGTTAAACACTGTACATATTCTCAAGTCTGGGGACTTTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195264308 279 + 198332218 AAAGGAAGAGTCAAACGGTGCAGCACAGTCAATGAATGTAAGAGTTGGATTAAGACATTTCA-AGGCCATGCTGGACTCTGGCA--CAAGATGTGCCGGGCTCTAAGGCGC-AACAGCCCAGGCTGGTCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGAGGTCGCCTGTGGTGGCGGGGCA-GGGGGTGC-GAGGTGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAACGCTTTTACGGATTTCTTAAACAGTGTACATATTCTCAAGTCTGGGGACTTTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111235920 280 + 115148730 AAAGAAAGAATCAAATGGTGCAGCACAGTCAATGAATCTAAGACTTGGATTACGACGTTTCA-AGGCCATGCTGGGCTGTGGCA--CAAGGCATGCTGGGCTCTAAGGCGC-AACAGCCCAGACTGCCCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGGGGTCGCCTGCGGTGGTGGGGCAGGGGGGTGC-GGGGAGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGCTTTTACGGACTTGTTAAACACTGTACATATTCTCAAGTCTGGGAACTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181039454 281 + 184069350 AAACAACGAATCAAATGATACAGCACAGTCAATGAATGTAAGACTTGGATTACGATGTTTCA-AGGCCATGCTGGCCTCTGGCA--CAGGGCATGCCGGGTTCTAAGGCGC-AACAGCCCATGCTGGCCAGAGGCATTGGGTTTGGGAGCCACTGAGCAGAGGTCGCCTACGGTGGGGCGGCAGGGGAGTGCAGGGGGGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGTTTCTGCGAATTTGTTAAACACTGTACATATTCTCAAGTCTGGGGACTTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186376631 281 + 189454096 AAACAACGAATCAAATGATACAGCACAGTCAATGAATGTAAGACTTGGATTACGATGTTTCA-AGGCCATGCTGGCCTCTGGCA--CAGGGCATGCCGGGTTCTAAGGCGC-AACAGCCCAGGCTGGCCAGAGGCATTGGGTTTGGGAGCCACTGAGCAGAGGTCGCCTGCGGTGGGGCGGCAGGGGAGTGCAGGGGGGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGTTTCTGCGAATTTGTTAAACACTGTACATATTCTCAAGTCTGGGGACTTTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175991753 281 + 178775436 AAACAAAGAATCAAATGATACAGCACAGTCAATGAATGTAAGACTTGGATTATGATGTTTCA-AGGCCATGCTGGCCTCTGGCA--CAGGGCATGCCGGGTTCTAAGGCGC-AACAGCCCAGGCTGGCCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGAGGTCGCCTGCGGTGGGGCGGCAGGGGAGTGCAGCGGGGAGCCACTGTCCACAGC-----------------CTTGATGACCAGGAAAGGTTTCTACGGGTTTGTTAAACACTGTACATATTCTCAAGTCTGgggacttttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132834869 281 + 135778131 AAACAAAGAATCAAGTGATACAGCACAGTCAACGAATGTAAGACTTGGATTAAGAGGTTTCA-AGGCCATGCTGGCCTCTGGCA--CAGGGCATGCCGGGTTCTAAGGCGC-GACAGCCCAGGCTGGCCAGAGGCACTGGGTTTGGGAGCCACTGAGCAGAGGTCGCCTGCGGTGGGGCGGCAGGGGAGTGCAGCGGGGAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAAAGGTTTCTACGGATTTGTTAAACACTGTACATATTCTCAAGTCTGGGGACTTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188218509 251 - 190850796 -------GGGTCAAGTGATGCAGCAAAGCTGATGAATGGAAGACTTGGATGAAGACGTTTCG-GGGGCAGGCTGGACTCTGGCA--CGAGGCGTGCCGGGATCGAAGGCTC-TACAGGCCAGGCTGGCCAGGGGCACCGGGTTTGGGAGCCACTGAGCAGAGGTGGCCCTCA---------------------GGGGCAAGCCACTGTCCACAGC-----------------CTTGATGGCCAGGAGAGGTTTTTGGGGATTTGTTGAACACTGTGCATATTCTCAAGTCTGGGGAATTT-- i calJac3.chr3 C 0 C 0 s mm10.chr8 84704001 253 - 129401213 TAGAAAAGGGTCAAATAATGCCATATAGTCAATGAGTGTAAGCTTTGGATTTACATGTTTCA-GGGGCA------ACAGTAGAAGCCAGTCCATGCTGAGACGTAAGGACC-AGATTGACAGGCTGGGCAAAG--ACCGCATTTGAGAGGCAGTGGGCAAAGGCCACCTGT----------------------GCGATGAGACCAGGCCCTCTGG-----------------TGTGGCATTGACAAAAGGCTGTTAAGGGCGTTTGAAGCAGTACACAGCTTTTCAGGCCTGGAGATTTCTT i mm10.chr8 I 70 I 29 s canFam3.chr16 15712223 266 - 59632846 aaaggaagAATCAAATGATGCAGGGAAGTCAGTGGATATAAGACCTGAATGCGGACATTTCAGGGGCCGTGGTGGATTCCAGCG--TAAGGCATGCTGAGATGGAAGGAACGGACTGATGGGCTTGGGCAAGGGC--TGGTTTGAGGAGCCAGGGGGCAGAGGTTCCCTG--------------------GTAGGGGTAAGCCGCTGTCCACAGGCCTGCGTCAGATGCAGACTTGATGTCCAGGAAAGGCTGTCAAGGATCTGTCGAACCCTAAACAAATTTGCAAGTT------------ i canFam3.chr16 I 125 C 0 a score=9331.000000 s hg38.chr4_KI270785v1_alt 26114 33 + 119912 aatttctttttttctttttc-ttttttttttGCA--- s panTro4.chr4 190298626 28 + 193495092 AATTCCTTTTTTTTTTTTT------TTTTTTGCA--- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195264587 31 + 198332218 AAtttcttttttttttttt---tttttttttGCA--- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111236200 19 + 115148730 AATTTTTTTT---------------TTTTTTGCA--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181039735 18 + 184069350 AAATTTTTT----------------TTTTTTGCA--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186376912 18 + 189454096 AAATTTTTT----------------TTTTTTGCA--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175992034 17 + 178775436 aaa-ttttt----------------ttttttgca--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132835150 17 + 135778131 AAA-TTTTT----------------GTTTTTGCA--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188218760 9 - 190850796 -------------------------TTTTTTTCA--- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15712489 37 - 59632846 GGTTGTTTTTTTGCTTGTGCAGTTTTGTTTTTTAACC i canFam3.chr16 C 0 C 0 e mm10.chr8 84704254 29 - 129401213 I a score=1388999.000000 s hg38.chr4_KI270785v1_alt 26147 362 + 119912 GTAGGC-TTTTTTTTT------AACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCA-GTTTTTCCAGGCTTATGAAATGCAAAATGTTAAACCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGGATCTGGAAGAGTCATGAATGCAAATAAGTGATTTTCTGCAATG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATACCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACGGGATGGGA---TGGAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-GGGTGAGCCTTGGGC s panTro4.chr4 190298654 365 + 193495092 GTAGGC-TTTTTTTTT---TTAAACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCA-GTTTTTCCAGGCTTATGAAATGCAAAATGTTAAACCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGGATCTGGAAGAGTCATGAATGCAAATAAGTGATTTTCTGCAATG--TTTATCTGCCCCTCCCAGCTGAAGTCACCGAGTATACCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACGGGATGGGA---TGGAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-CGGTGAGCCTTGGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195264618 362 + 198332218 GTAGGC-TTTTTTTTT------AACTCCGAATTTTAACAACCTAACTATCTAAGAG-ATTTAACAACTGCA-GTTTTTCCAGGCTTATGAAATGCAAAATGTTAAACCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCATGAATGCAAATAAGTGATTTTCTGCAATG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATACCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACGGGATGGGA---TGGAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCCAGCTTC-GGGTGAGCCTTGAGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111236219 367 + 115148730 GTAGGC-TTTTTTTTA-AAAAAAACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCA-GTTTTTCCAGGCTTATGAAATGCAAAATGTTAAACCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCATGAATGCAAATAAGTGATTTTCTGCAATG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATACCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACGGGATGGGA---TGGAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGT-GGGTGAGCCTTGGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181039753 369 + 184069350 GTAGGCTTTTTTTGTTTTTTTAAACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCA-TTTTTTCCAGGCTTATGAAATGCAAAATGTTAACCCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAACTTAATGGCTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCATGAATGCAAATAAATGATTTTCTGCAGTG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATGCCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACCGGATGGGC---GGAAGCCCGGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-AGGTGAGCCTTGGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186376930 368 + 189454096 GTAGGC-TTTTTTGTTTTTTTAAACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCA-TTTTTTCCAGGCTTATGAAATGCAAAATGTTAACCCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCATGAATGCAAATAAATGATTTTCTGCAGTG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATGCCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACCGGATGGGC---GGAAGCCCGGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-AGGTGAGCCTTGGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175992051 368 + 178775436 gtaggc-ttttttgtttttttaaactctgaATTTTAACAACCTTACTATCTAAGAG-ATTTAAGTACTGCA-TTTTTTCCAGGCTTATGAAATGCAAAATGTTAACCCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAACGAATCTGGAAGAGTCATGAAtgcaaataaatgattttctGCAGTG--TTTATCTGCCCCTCCCAGCTGAAGTCACTGAGTATGCCAGCAGC-TGCAGATC---CCACTGAGCAGCGCTGACCGGATGGGC---GGAAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-AGGTGAGCCTTGGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132835167 366 + 135778131 GTAGGC-TTTTTTGTTTTTTTAAACTCTGAATTTTAACGACCTAACTAACTAAGAG-ATTTAAGAACTGCA-TTTTTTCCAGGCTTATGAAATGCAAAATGTTAACCCTTCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGCTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCATGAATGCAAATAAGTGATTTTCTGCAGTG--TTTATCTGCCCCTCCCAGCTGAAGCCACTGAGTATGCCAGCAGC-TGCAG-TC---CCACTGAGCAGCG-TGACCGGATGGGT---GGAAGCCCAGGCCACC--TGCT-------------GGC-----------CTGA-GATGCAAGGTTCCCTCTGGCTGC-AGGTGAGCCTTGGGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188218769 377 - 190850796 GTAGGC-CTTTTTTTTTTT----ACTCTGAATTTTAACAACCTAACTATCTAAGAG-ATTTAAGAACTGCATTTTTTTCTAGGCTTATGAAATGCAAAAAGTTAAACCTCCCACTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAATGGTTAAGTGAGATAATTTAAAGAATCTGGAAGAGTCGGGGATGCAAGTAAGTGATTTTCTGCAGTGATTTTATCTGTCCCTCCCAGCTGAAGTCACTGAATATGCCAGAAGC-TGCAGATC---CCACTCAGCAGCGCTGACGGGATGGGA---GGGCACCCAGG-CACC--TGCT-------------GGTGGAATTTGCCGCCGA-GATGCAAGGTTCTGTCCGGCTGC-GGGCAGGCCGTGGGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84704283 335 - 129401213 GTACAC-CTTCTTT---------ACTGTGAATTTTAATGACCTAAGTAC--------ATTTAAGAACTGCA-TTTTTTC-AGCCTTATGAAA--------------CCTCCCACTTGGCTAATGAGAGAATACAATTACTGTCTAACCAAAGTAATTGAATGGCTAAGTAAGGTCATTTATAGAATGC-ACAGAGTCATGAATGCAAATAAGTAATTGCATGTAATG--TTTCTCTG-CCTTCCCAGCTGAAGTCACTG---GTGCCAACACC-TGCAGACCAAACTAGTAGATAGGCCACACCTAGTGAGG---CGCTGGTGGAGTCATTGACGCT-------------GGG-----------CTAAGGGTTCAATGGTGTAT---GTTAT-GTGTGAGCCTTGGGT i mm10.chr8 I 29 I 43 s canFam3.chr16 15712526 373 - 59632846 ATAGGC-TTCCTTT---------ATTCTGAATTTTAACAACCTAACTATCTAAGAGCATTTAAGAACTGCA-TTTTTCCCAGGCTTATGAAATGCAAAAGGGCAAACCTCCCATTTTGCTAATGAGAGAATACAATTACTGTCTAACCAAAATAATTTAAGGGCTAAGGAAGATAATTTAAAGAATCTGGAAGAGTCATAAATGCAAATGAATAATTTTATATAATG--TTTATCTACCCCTCCCAGCTGAAGCCGCCTG--ATCCCAGGAGCTTGCACATC---TCACT---CTCTTCAGGCCTGATGGGACTCTGCCGCCCAGGTGACC--TGCTAGGTGGGCTTTGCAGC-----------CCTA-CATCCAGGGCTCAAGCCGGCTGTGGGGCGAGCCTTGGGC i canFam3.chr16 C 0 C 0 a score=127032.000000 s hg38.chr4_KI270785v1_alt 26509 40 + 119912 --ACAGGGAGTCAGCCTCCTGCAGGTGGGGCCTGGGCCTGTC s panTro4.chr4 190299019 40 + 193495092 --GCAGGGAGTCAGCCTCCTGCAGGTGGGGCCTGGGCCTGTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195264980 40 + 198332218 --ACAGGGAGTCAGCCTCCTGCAGGTGGGGCCTGGGCCTGTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111236586 40 + 115148730 --ACAGGGAGTCAGCCTCCTGCAGGTGGGGCCTGGGCCTGTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181040122 40 + 184069350 --ACAGGGAGTCAGCCTCCTGCAGGTGGGACCTGGGTCTCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186377298 40 + 189454096 --ACAGGGAGTCAGCCTCCTGCAGGTGGGACCTGGGTCTCTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175992419 40 + 178775436 --ACAGGGAGTCAGCCTCCTGCAGGTGGGACCTGGGTCTCTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132835533 40 + 135778131 --ACAGGGAGTCAGCCTCCTGCAGGTGGGACCTGGGTGTCTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188219146 34 - 190850796 --ACAGGGAGTCAGCCTCCTGCAGGTGGG---TGAG---GCC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15712899 42 - 59632846 ATTCTGAATTGCAGCCTCCTGCAGGTGGCTCCTGGGTTTTCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84704618 43 - 129401213 I a score=2393212.000000 s hg38.chr4_KI270785v1_alt 26549 743 + 119912 TGATACCCACAGCCTTTAGTGTCTGTCTTCAGCGCGTTTTGCT----------------CTCTTTTCCTACC------------------------TAGACTCCAAGATTCCTTGCCACCTGTGCTCCTGCCGCCGTTCTC-CGCCATCTGATAAGCACTCTCTGGGCCCTGACACTGACCTGAACTGGACCAGGGTTAAGCCCAAGTCGCCCCGTCCTTCTGGG-----------AA---------GGCTCTGTGGAGTC----TCCCACA-TTTCTCTC----CAGCTGCCTTCACCTCTCCCTTGCTCCATGGTCTTGAGGGCTCAGCCTTCCGGCCCCCATTCATTAAAGTTCATGATTTTCAATCACAAAGAAATGGCTACTTT-ACCAGAAAAAGCAGTCAGTTTGCTTAGGTATTTT---------------TCCAGAGA-CAAAATGGAAGTTAAATGAAAGAAATAAGGTATCGCATTCCACCT-AAGCCAGTGGGTAGCTTTACTT-----GAAAA-ACTGCCCGAATGTCCCTGTTTTGTCGTT-----GAGTGAACAGAGGAGCGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGGGAACAGGCAAT----ATGGATGCA---------TGTAAAATTCTTGCTTGAGGATTAAGAGTCCAAAT--GTGTTTTAAGAACTGGCTATG-----CAAAATCTCAGATATAACTGATAAACTGTTGTAATCTGGTTGGCATATAGTCCTGTCTGTACCACACTTTTTCTTTCCCTAAAACACAATTTGGC-TTTCTACTTGTTGAACAAACAGAT-ATGGCAAATAAAAGAAGGACAAATGTTATT s panTro4.chr4 190299059 730 + 193495092 TGATACCCACAGCCTTTAGTGTCTGTCTTCAGCGCGTTTTGCT----------------CTCTTTTCCTACC------------------------TAGACTCCAAGATCCCTTGCCACCTGTGCTCCTGCCGCCGTTCTC-CGCCATCTGATAAGCACTCTCTGGGCCCTGACACTGACCTGAACTGGACCTGGGTTAAGCCCAAGTCACCCCGTCCTTCTGGG-----------AA---------GGCTCTGTGGAGTC----TCCCACA-TTTCTCTC----CAGCTGCCTTCACCTCTCCCTTGCTCCGTGGTCTTGAGGGCTCAGCCTTCCAGCCCCCATTCATTAAAGTTCATGATTTTCAATCACAAAGAAATGGCTACTTT-ACCAGAAAAAGCAGTCAGTTTGCTTAGGTATTTT---------------TCCAGAGA-CAAAATGGAAGTTAAATGAAAGGAATAAAGTATCGCATTCCACCT-AAGCCAGTGGGTAGCTTTACTT-----GAAAA-ACTGCCCGAATGTCCCTGTTTTGTCGTT-----GAGTGAACAGAGGAGCGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGGGAACAGGCAAT----ATGGACGCA---------TGTAAAATTCTTGCTTGAGGATTAAGAGTCCAAAT--GTGTTTTAAGAACTGGCTATG-----CAAAATCTCAGATATAACTGATAAACTGTTGTAATCTGGTTGGCATATGGTCCTGCCTGTACCACACTTTTTCTTTCCCTAAAACACAATTTGGC-TTTCTACTTGTTGAACAAACAGAT-ATGGCAAATAAAAGAGG------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195265020 743 + 198332218 TGATACCCACAGCCGTTAGTTTCTGTCTCCAGCGCATTTTGCT----------------CGCTTTTCCTACC------------------------TAGACTCCAAGATCCCTTGCCACCTGTGCTCCTGCCGCCGTTCTC-CGCCATCTCATAAGCTCTCTCTGGGCCCTGACACTGACCTGAACTGGACCTGGGTTAAGCCCAAGTCGCCTCGTCCTTCTGGG-----------AA---------GGCTCTGTGGAGTC----TCCCACA-TTTCTCTC----CAGCTGCTTTCACCTCCCCCTTGCTCCGCCACCTTGAGGGCTTAGCCTCCCAGCCCCCATTCATTAAAATTCATGATTTTCAATCACAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGTCAGTTTGCTTAGGTATTTT---------------TCCAGAGA-CAAAATGGAAGTTAAATGAAAGGAATAAAGTATCACATTCCACCT-AAGCCAGTGGGTAGCTTTACTT-----GAAAA-ACTGCCCGAATGTCCCTGTTTTGTCGTT-----GAGTGAACAGAGGAGGGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ACGGATGCA---------TGTAAAATTCTTGCTTGAGGATTAAGAGTCCAAAT--GTGTTTTAAGAACTGGCTATG-----CAAAATCTCAGATATAATTGATATACTGTTGTAATCTGGTTGGCATATAGTCCTGTCTGTACCACACTTTTTCTTTCCCTAAAACACAATTTGGC-TTTCCGCTTGTTGAAAAAACAGAT-ATGGCAAATAAAAGAAGGACAAATTTTATC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111236626 742 + 115148730 TGATACCCACAGCCTTTAGTGTCTGTCCTCAGCGCGTTTTGCT----------------CTCTTTTCCTACC------------------------TAGACTCCAAGATCCCTTGCCACCTGTGCTCCTGCCGTCGTTCTC-CGCCATCTGATAAGCACTCTCTGGGCCCTGACACTGACCTGAACTGTACCTGGCTTAAGCCCAAGTCGCCTTGTCCTTCTGGG-----------AA---------GGCTCTGTGGAGTC----TCCCACA-TTTCTCTG----CAGCTGCCTTCACCTCCCCCTTGCTCCGCGGCCTTGAGGGCTCAGCCTCCCGGCCCCCGTTCATTAAAGTT-ATGATTTTCAATCAGAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGTCAGTTTGCTTAGGTATTTT---------------TCCAGAGA-CAAAATGGAAGTTAAATGAAAGGAATAAAGTATCACATTCCACCT-AAGCCAGTGGGTAGCTTTACTT-----GAAAA-ACTGCCCGAATGTCCCTGTTTTGTCCTT-----GAGTGAACAGAGGAGGGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ATGGATGCA---------CGTAAAATTCTTGCTTGAGGATTAAGCGTCCAAAT--GTGTTTTAAGAACTGGCTATG-----CAAAATCTCAGATATAACTGATATACTGTTGTAATCTGGTTGGCATATCGCCCTGTCTGTACCACACTTTTTCTTTCCCTAAAACACAATTAGGC-TTTCTACTTGTTGAAAAAACAGGT-ATGGCAAATAAAAGAAGGAGAAATTTTATC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181040162 742 + 184069350 TGATACCCACAGCCCTTAGTGTCTGTCTTCAGCACGTTTTGCT----------------CTCTTTTCCTACC------------------------TAGACTCCAAGAT-CCTTGCCACCTGCGCTCCTGCCACCATTCTC-TGCCATCTGATGAGCACTCTGTGGGCCCTGACACTGACCTGAACTGGACCTGGGTTAAGTCCAAGTCGCCCTGTCCCCCTGGG-----------AC---------AGCGCTGTGGAGTC----TCCCCCA-TTTCTCTC----CAGCTGCCTTCACCTCCCCCTTTCTCCGTGGTCTTGAGGGCTCAGCCTCCTGGCCCCCATTCATTAGAGTTCGTGATTTTCAATCACAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGT--GTTTGTTGAGGTATTTT---------------TCCAGAGACCAAAATGGAAGTTAAACGGAAGGAACAAAGTATCACATTCCACCT-AAGCCAGCGGGTAACTTTACTT-----GAAAA-ACTGCCCGAATGTGCCTGTTTTGTCGTT-----GAGTGAACACAGGAGGGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ATGGATGCA---------TGTGAAATTCTTGCTGGAGGATTAAGAGTCCAAAC--GTGTTTTAAGAACCGGCTATG-----CAAAATCTCGGATATAACTGATAGACTGTTGTAATCTGGTTGGCAAATTGTCCTGCCTGTACCACATTTTTTCTTTCCCTAAAACACAATTTAGCTTTTCTACTTGTTGAAAAAACAGAT-TTGGCAAATAAAAGAGAGACAAATTTTATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186377338 739 + 189454096 TGATACCCACAGCCCTTAGTGTCTGTCTTCAGCACGTTTTGCT----------------CTCTTTTCCTACC------------------------TAGACTCCAAGAT-CCTTGCCACCTGCGCTCCTGCCACCATTCTC-TGCCATCTGATGAGCACTCTGTGGGCCCTGACACTGACCTGAACTGGACCTGGGTTAAGTCCAAGTCGCCCTGTCCCCCTGGG-----------AC---------AGCGCTGTGGAGTC----TCCCCCA-TTTCTCTC----CAGCTGCCTTCACCTCCCCCTTTCTCCGTGGTCTTGAGGGCTCAGCCTCCTGGCCCCCATTCATTAGAGTTCGTGATTTTCAATCACAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGT--GTTTGTTGAGGTATTTT---------------TCCAGAGACCAAAATGGAAGTTAAACGGAAGGAACAAAGTATCACATTCCACCT-AAGCCAGCGGGTAACTTTACTT-----GAAAA-ACTGCCCGAATGTGCCCGTTTTGTCGTT-----GAGTGAACACAGGAGGGGACGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ATGGATGCA---------TGTGAAATTCTTGCTGGAGGATTAAGAGTCCAAAC--GTGTTTT---AACCGGCTATG-----CAAAATCTCAGATATAACTGATAGACTGTTGTAATCTGGTTGGCAAATTGTCCTGCCTGTACCACATTTTTTCTTTCCCTAAAACACAATTTAGCTTTTCTACTTGTTGAAAAAACAGAT-TTGGCAAATAAAAGAGAGACAAATTTTATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175992459 743 + 178775436 TGATACCCACAGCCCTTAGTGTCTGTCTTCAGCACGTTTTGCT----------------CTCTTTTGCTACC------------------------TAGACTCCAAGATCCCTTGCCACCTGCGCTCCTGCTACCATTCTC-TGCCGTCTGATGAGCACTCTATGGGCCCTGACACTGACCTGAACTGGACCTGGGTTAAGTCCAAGTCGCCCTGTCCCCCTGAG-----------AC---------AGCTCTGTGGAGTC----TCCCCCA-TTTCTCTC----CAGCTGCCTTCACCTCCCCCTTTCTCCGTGGTCTTGAGGGCTCAGCCTCCTGGCCCCCATTCATTAAAGTTCGTGATTTTCAATCACAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGT--GTTTGTTGAGGTATTTT---------------TCCAGAGACCAAAATGGAAGTTGAATGGAAGGAACAAAGTATCACATTCCACCT-AAGCCAGTGGGTAACTTTACTT-----CAAAA-ACTGCCCGAATGTGCCTGTTTTGTCGTT-----GAGTGAACACAGGAGGGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ATGGATGCA---------TGTGAAATTCTTGCTGGAGGATTAAGAGTCCAAAC--ATGTTTTAAGAACCGGCTATG-----CAAAATCTCAGATATAACTGATAGACTGTTGTAATCTGGTTGGCAAATTGTCCTGCCTGTAccacattttttctttccctaaaaCACAATTTAGCTTTTCTACTTGTTGAAAAAACAGAT-TTGGCAAATAAAAGAGAGACAAATTGTatt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132835573 743 + 135778131 TGATACCCACAGCCCTTAGTGTCTGTCTTCAGCACGTTTTGCT----------------CTCTTTTGCTACC------------------------TAGACTCCAAGATCCCTTGCCACCTGTGCTCCTGCCGCCATTCTC-TGCCGTCTGATGAGCACTCTATGGGCCCCAACACTGACCTGAACTGGACCTGGGTTAAGTCCAAGTCGCCCTGTCCCCCTGGG-----------AC---------AGCGCTGTGGAGTC----TCCCCCA-TTTCTCTC----CAGCTGCCTTCACCTCCCCCTTTCTCCATGGTCTTGAGGGCTCAGCCTCCTGGCCCCCATTCATTAAAGTTCGTAATTTTCAATCACAGAGAAATGGCTACTTT-ACCAGAAAAAGCAGT--GTTTGTTTAGGTATTTT---------------TCCAGAGACCAAAATGGAAGTTAAATGGAAGGAACAAAGTATCACATTCCACCT-AAGCCAGCGGGTAACTTTACTT-----GAAAA-ACTGCCCGAATGTGCCTGTTTTGTCGTT-----GAGTGAACACAGGAGGGGATGTGAGCATTTTTCAGCAGAGATGTGCTGCTTTGCAGTGAACAGGCAAT----ATGGATGCA---------TGTGAGATTCTTGCTGGAGGATTAAGAGTTCAAAC--GTGTTTTAAGAACCGGCTATG-----CAAAATCTCAGATATAACTGATAGACTGTTGTAATCTGGTTGGCAAATTGTCCTGCCTGTACCACATTTTTTCTTTCCCTAAAACACAATTTAGCTTTTCTACTTGTTGAAAAAACAGAT-TTGGCAAATAAAAGAGAGACAAATTTTATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188219180 687 - 190850796 TGATACCCACAGCCCTTCGTGTCTGTCTTCAGCGCGTTTTGCT----------------CTTTTTACCCACC------------------------TAGACACCAAGATCCCTTGCCACCTGTGATCCTGCTGCCTTCCTC-CGCCATCTGATAAGCATGCTGCGGGCCCTGGCACTGACCCGAACTGGGCCTAGGTTAGGCCCGAGTTGCCCCGTCCCT-GGGG-----------AC---------GGTTCTGTGGAGTC----TCCCACT-CTTCTCTC----CAGATGCCTTCACCTCCCCCTTTCTCCGT--------GGGGTCAGCCTCCTGGCCCCCATTCATTCAAGTTCCTTATTT--------GGAAAAA--------------AAAAAAAGAGCTCAGTTTGCTTAGGGATTTT---------------TCCAGAGA-CAAAACTGAAGTTAAATGGAAGGAACAAAGTATCACATTCAACCG-A--------------------------GAAAA-ACTGCCAGAACCTCTTTGTTTTGTCGTT-----GAGCGAACGGAGGAGGGGATGTGAGCACTTTCCAGCAGCGATGTGCTGCTTTGCCGTGAACGGGCAAT----ATGGCTGCA---------TGTGGAATTCTTGCCAGAGGATT--GAGTCCCAAC--TAGTGTTAAGAACTGGCTCTG-----CAGAATCTCAGAT-TAAC--ATACATTGTTGCAATCTGGTCCGCAAAGAGTCCTGTCTGTACATTTTTTTTTCTTTCCCTAAAACACAATTTGGC-TTTCTTCTGGTTGTAAAAACAGGT-ATGGCAAATAAAAGAAAGACAAATTTTATT i calJac3.chr3 C 0 C 0 s mm10.chr8 84704661 764 - 129401213 TGACAGTTCTCTTCCTTGGAGTTTGTCCTTAGTATATTTTGTTATTGCCCTcttccttcctccttccctccctcccttcctccctccctccctcTGTAGACATTAAGAT-TCTTGCTGTCCGTGTAGATATGGTACCTCTCACGTGATCTGATAAAAGTTCCATTGACCCTCATGCTG-CCTAAGCCAGACCTGAATGAACCCCAAGCTGCCCC-TCGCCCTGGTGCCTGAGTTTCAG---------ACCTCAGCAGGGCCAGATTTCCACA-GTCTCCCCGCAGCAGCTGCC-TCGTCTCTCCACTTGGCTGT-GTTCCAAGAGCACAGCCTGCTGGCCCTCATTCATCAAAGTTCATGATGCATAATCACCAATAAAGAGCTACTTTCACTGAAAAACACATTCAGTTTGATTCTGGGCTTTTTTTTGTTGTTGTTGTTCAGAGA-CAAAATTGAAGTTAAATGGAAGGAGTGATGTTTCCCGTTCAACCTCAAGCCACTGAAGAAGCTTTCTTTGGGGGGAAA-AATG------------TATTTTGCTATTGATGGGAGCCAGCAAGGGAAGGGATCCGAGCAGTTTCCAGCCGAGAT----------------AAGGGAAGAC----CAGGATGCATGATCTGGCTGTGAAGGCCTTGCTTAGGGATTAACAGTCCAGAC-AGTGCTTCGGTTCCTCACTATGGGGAACGAAACCTCAGCTATTACTGTTGCTTATTTACAGTTT-GTCAACAAATA--CCTGCCTGT-------TGTTTCCT------AAACATGTCTGGAT-GTTTTCC--------AAAATGAAG-TTGGTA------------------------ i mm10.chr8 I 43 C 0 s canFam3.chr16 15712941 710 - 59632846 -----------------------TGTCT-------------------------------CTCCTTTCCTGTC------------------------TAGACACAAGAGT----------ATTTACTCCTAGCGCCTTCCTA-TGCTGTCTGATATGAACTCCAGGGACCCCGACATTGACCTGGACCAGGTGTGACCCAAGCC--AGTTTCCTGCATCACTCGGG-----------ACCTCAGCATTGAACCCGCAGAGTATGATTCCCACAGCTTCTCTC----CAGCTGCCTCCACTTCTCCCTTTGGCTGTGTTCCCAAGGGCTCAGCCTGCTGGCCCCCATTCATTAAAGGGCATGAGTTTTAATCACAGATAAACGGCTCCTTT-AACAGAAAAAGCATTCAGTTTGTTTCTGTATTTT---------------TCCAGAGA-CAAACT-GAAGTTAAATAAAAGGAACGAAGTATCACATTCAGCCC-AA---AGTGGGCA-CTTCACTT-----GAAAACGTTGCCCAAATGCCCCTAGTTTGTCAGGGACGGGAATAAATGAAGGAAAGGATGTGACTATTTTTCAGGGGAGATTTGCTGCTTTGCAGTGAACAAAGAACTAGGAGGGATGTT---------TATGAAATTCTTGCTGCAGGGTTAAGAGCCCAAACTAGTGTTTTAAGAAAGTGTGAAG-----GGAAATCTCACATGTGATTGATAGCCTGTTGTGATTTGGTTGGCAAATAATCCTGTCTATAC-----ATTTTCTTCTCTTAAAACAAAATTTGGC-ATTTTTCCTGTTGTGAAAACTGATAATATCAAATTAAAGAAAGACAAATTTTATT i canFam3.chr16 C 0 C 0 a score=290042.000000 s hg38.chr4_KI270785v1_alt 27292 161 + 119912 GA-----Ctttttttttttcc----tgagaaagagtcctgctgtgtggcccaggctggagtgcagtggcgcgatctccgctcacagcaacctctgccttcagcattcaagtgattctcttgcctcagcctcccgagtagctgggattacaggcatgtgccacctcaccca s panTro4.chr4 190299789 88 + 193495092 ----------------------------------------------------------------------------------acagcaacctctgcctccagcattcaagtgattctcttgcctcagcctcccgagtagctgggattacaggcatgcgccacctcaccca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195265763 159 + 198332218 GA-------ttttttttttcc----tgagaaagagtcctgctctgtggcccaggctggagtgcagtggcgtgatctctgcttacagcgacctctgcctccagcattcaagtcattctcttgcctcagcctcctgagtagctgggattacaggcatgtgccacctcacctg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111237368 166 + 115148730 GAtttttttttttttttttcc----tgagaaagagtcctgctctgtggcccaggctggagtgcagtggcatgatctctgctcacagcaacctctgcctccagcgttcaagtgattctcttgcctcagcctcccgagtagctgggattacaggtgtgtgccaccacacccg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181040904 163 + 184069350 GATCtttttaattttttttcc----tgag---gagtcctgctctgtggcccaggttggagtgccgtggcacgatctccgctcacagcaacctctgcctctggcattcaagtgattctcttgcctcagcctccggagtagctgggattacaggtgtgtgccaccatacccg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186378077 163 + 189454096 GATCtttttaattttttttcc----tgag---gagtcctgctctgtggcccaggttggagtgccgtggcacgatctccgctcacagcaacctctgcctctggcattcaagtgattctcttgcctcagcctccggagtagctgggattacaggtgtgtgccaccatacccg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175993202 163 + 178775436 gatctttttaattttttttcc----tgag---gagtcctgctctgtggcccaggttggagtgccgtggcacgatctccgctcacagcaacctccgcctctggcattcaagtgattctcttgcctcagcctccggagtagctgggattacaggtgtgtgccaccatacccg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132836316 163 + 135778131 GATCtttttaattttttttcc----tgag---gagtcctgctctgtggcccaggttggagggccgtggcacgatctccgctcacagcaacctccgcctctggcagtcaagtgattctcttgcctcagcctccggagtagctggcattacaggtgtgtgccaccatacccg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188219867 120 - 190850796 GTCTTAAAAACGTTCTCTGCCCCCACCAG---gagtcctgctct-ttgcccaggctggagtgcagtggcgccatc----------------------------------------------acgcagcctccccagtagctgggattacaggtgtgtgtaaccacaccca i calJac3.chr3 C 0 C 0 s mm10.chr8 84705425 61 - 129401213 -------------TTCTTTCT---------------------------------------------------ATCATAGCAAACCACAATAT------------------------------------TTCCTGCATGAAGAAAATTATATATGTAT---------TTTT i mm10.chr8 C 0 C 0 e canFam3.chr16 15713651 0 - 59632846 C a score=215983.000000 s hg38.chr4_KI270785v1_alt 27453 76 + 119912 gcCTTATGAAGCGA-TTTTTACATATGACATTAGAGATATCAAAGGGGAGTGTCTTATGGTAAAAAAGCTCTACACG s panTro4.chr4 190299877 76 + 193495092 gcCTTATGAAGTGA-TTTTTACATATGACATTAGAGATATCAAAGGGGAGTGTCTTATGGTAAAAAAGCTCTACACG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195265922 76 + 198332218 gcCTTATGAAGTGA-TTTTTACATACGAGATTAGAGATATCAAAGGCGAGTGTGTTATGGTAAAAAAGCTCTACACG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111237534 76 + 115148730 gcCTTATGAAGCGA-TTTTTACATATGAGATTAGAGATATCAAAGGGGAGTGGCTTATGGTAAAAAAGCTCTTCACG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181041067 77 + 184069350 gcCTTATCAAACAGTTTTTTACATATGAGATTAGAGATATCAAAGGGGAGTGTCTTATGGTAAAAAAGCTCTATACA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186378240 77 + 189454096 gcCTTATCAAACAGTTTTTTACATATGAGATTAGAGATATCAAAGGGGAGTGTCTTATGGTAAAAAAGCTCTATACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175993365 77 + 178775436 gccttaTCAAGCAGTTTTTTACATATGAGATTAGAGATATCAAGGCGGAGTGTCTTATGGTAAAaaaggctaacacg i papAnu2.chr5 C 0 I 207 s chlSab2.chr7 132836479 76 + 135778131 gcCTTATCAAGCAATTTTTTACATACGAGATTAGAGATATCAAAGGGGAGTGTCTTATGGTAAAAAA-CTCTATACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188219987 76 - 190850796 gcCTTATGAAGCCA-TTTTTACTCATGAGAATAGAGATATCAAAGGGGAGTGTCTTACAGCACAAAAGCCTTTTAAA i calJac3.chr3 C 0 I 2 s mm10.chr8 84705486 68 - 129401213 GTTTTAGCAAGTTA-CTCTTATATTGGAGAGTAGAAGTATT---GTGGAGGATACTAAGGGTATCAAGACCT----- i mm10.chr8 C 0 C 0 s canFam3.chr16 15713651 73 - 59632846 GTTCTGTGAAGCTA-TGTGTACACTTGAGATTAGGGCTATCAGAGGAAAATATATTATGGCAAAAAAAG---ATATG i canFam3.chr16 C 0 C 0 a score=602431.000000 s hg38.chr4_KI270785v1_alt 27529 242 + 119912 ---TTTTTAAAAACATGATTCCACTGGTATACATTTTTCCAATAAAACTCCAAAATTGATCCTATCCTAGGTATAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTTGGGAACATTTTTGGTTTCAATATTTACA--TTAGGATTTTGATTTTTT-----------TAAATAATTATTG------ATCATTTCCAGTTTGAAAATGTT--AAAAAAAATTTTTGAACAGTAACAAATTTT s panTro4.chr4 190299953 242 + 193495092 ---TTTTTAAAAACATGATTCCACTGGTATACATTTTTCCAATAAAACTCCAAAATTGATCCTATCCTAAGTATAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTTGGGAACATTTTTGGTTTCAATATTTACA--TTAGGATTTTGATTTTTT-----------TTAATAATTATTG------ATCATTTCCAGTTTGAAAATGTT--AAAAAAAATTTTTGAACAGTAGCAAATTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195265998 242 + 198332218 ---TTTTTAAAAACATCATTCCACTGGTATACATTTTTCCAACAAAACTCCAAAATTGATCTTATCCTAGGTATAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTTGGGAACATTTTTGGTTTTAATATTTACA--TTAGGATTTTGATTTTTTA----------AAAATAATTATTG------ATCATTTCCAGTTTGAAAATGTT---AAAAAATTTTTTGAACAGTAACAAATTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111237610 243 + 115148730 ---TTTTTAAAAACGTGATTCCACTGGTATATATTTTTCCAATAAAACTCCAAAATTGATCCTATCCTAGGTATAATCTTATCCTTCTTCACACCTTTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTCGGGAACATttttagttttaatatttaca--ttaggattttgattttTTAC---------AAAACAATTATTG------ATCATTTCCAGTTTGAAAATGTT---AAAAAAATTTTTGAACAGTAACAAATTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181041144 243 + 184069350 ---TTTTAAAAAACATGATTCCACTGGTATGCATTTTTCCAATAAAACTGCAAAATTGATCCTATCCTAGGTAAAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTTGGGAACATTTTTGGTTTTAATATTTACA--TTAGGATTTTGATTTTTAA----------AAAATAATTATTG------ATCATTTCCAGTTTGAAAATGTC--AAAACAATTTTTTGAACAGTAACAAATTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186378317 243 + 189454096 ---TTTTAAAAAACATGATTCCACTGGTATGCATTTTTCCAATAAAACTGCAAAATTGATCCTATCCTAGGTAAAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCCTTGGGAACATttttggttttaatatttaca--ttaggattttgattttTAA----------AAAATAATTATTG------ATCATTTCCAGTTTGAAAATGTC--AAAACAATTTTTTGAACAGTAACAAATTTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132836555 243 + 135778131 ---TTTTAAAAAACATGATTCCACTGGTATGCATTTTTCCAATAAAACTCCAAAATTGATCCTATCCTAGGTAAAATCTTATCCTTCTTCACACCTCTCCCATCCTTAAAAAAA-------------CTCTAAGTTAA-------------TTGGCGTTGGAAACATttttggttttaatatttaca--ttaggattttgattttTAA----------AAAATAATTATTG------ATCATTTCCAGTTTGAAAATGTC--AAAACAATTTTTTGAACAGTAACAAATTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188220065 246 - 190850796 ---GTCTTAAAAACGTGGTTCCACTGCTATACACTTTTGCAATAAAACTCCAAAATTGATCCCATCCTAGGTATAATCTTA-CGTTCTTCATACCTCTCCCCTCCTT-AAAAAA-------------CTCTAAGTTAA-------------TTGATCTTGGGAACATTTTTGGTTTTGATATTTACATTTTAGGATTTTGAATTTTTAT------AAAGTAATAATTATTG------ATCATTTCCAGTTTGAAAATGTT---CAAAAAATTTTTGAACACTAACGAATTTT i calJac3.chr3 I 2 C 0 s mm10.chr8 84705554 216 - 129401213 ---------AAAATGCAGTTCTGCTGATATAC------------------------TGATTTTATACCAAACATCATCTTACCTTCTAGTCTACCCTT--CACCCTTAAAAGTA--------------TCTAAATTGGATTGCCACTTATCTTGTCCTTGGGAACAGTTTTCATTTTAATACTTA-A--GTAATAT----------------------ACATTGAATATTGGGCATCATCACTTCCAGTTTAGAAATGTT--CTTAACATGTTCAATAAATGAATGGATATT i mm10.chr8 C 0 I 2 s canFam3.chr16 15713724 251 - 59632846 TGAATCTAAAAAATGTGGTTCCACTGATAT--ATCATTGTAATACAAC--------TGATTCTGTG-TGGGCACAGTCTGTTCTTT-----TACCTCCTCCAACCTTAAAAAATAAATTGAAATCGTCCATACTTTAA-------------TTGGCCCTGGGAACATTTGTGGCATCGGTGGTTAAAGGTGAGGGTTTAGATTTTTTTTTCCCCAAAAATAATGATCATTG------ATCATTTCCAGTCTGGAAATGTTTTAAGACTTTTTTCTGAACATT------TTTT i canFam3.chr16 C 0 C 0 e papAnu2.chr5 175993442 207 + 178775436 I a score=5269838.000000 s hg38.chr4_KI270785v1_alt 27771 1534 + 119912 AAGAGGACTTTTTAT--CCCCTAAAGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAGTATTTTAAGGTGCCAGGTGTATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACGAGATCAATAGAACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCAGACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATTTAACCACTAAAAATAGCTTATAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATCTCCCTTCTGTGATAAGAAAATTTCAAAGCACATTAGGGACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGTACTTATTTTGGGAATGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCAATCTCCAGGCTAAATATACAGTCTACAGACTGTGTTGGTGGC--TGCGAAGGCATCG--TTTTCCTCGCAGCAAAGCCAGGGCTCGATTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGGCTGTGGG------GCGAGGCCAGACTGAG---GGAGATTCAGGGAGGCCAGTGAGAAAACCAACAGCTGCAGGAAGCAGTGTTCATCAAGTGGAGCACGTCTT--GTGG-GGGTTGGAGTATTTGGAAAGATCTCAGAAGATATGCTTTCCTTTTCCTGTCACCAATGAGATATGCCTGGAATTGCT--C--GTTTTGTATATCTTAGAATGGGAAATGTCCAGCTTACAAATTATTTTGAGGTTAATTGCTCTTAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTTCCAAATTGACATCACCCTTTCCTACGTAGTGGGTGAGATCCTATTGTGTCTAGAGATAGAGACAGATCAGGGCTGTCTGTGGCT-GGGAGTGATGGCAGTCTCCAAACAGAGAGGGGTTTCTCTCGCTCCCTGTCGTCCCATCTCAGGCCACAGGTGGGCAGCGGAGCCCAGAGTTAAGTGGGAAGCCATGAG--TGGGCAGACATTAGCTGTGCCTTCCTCTGCCTCAGG---GGTCACC-----ATCAGGATTTTCATCATTGTACTCGCTTCCCT-TTCGTACCCTA-CCACATCCAGACTGGACCTGTGATGGGAGCTGAGGCTCCTTCTGGGTCTCAGT--------------GTGTCTGAAACG--GTCCTGTGTTGGGTGCTGGGATGATAGAACC-GACACCCAGTGAGTCCTAGCAGTGG------AACCACCTGCCCTGCT-AATCA-GACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCTGTG----GCTAAGT----ATTAC------TGTCTTTTTAAATTC-AAACGTCGTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTGAAAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGGAAGAATTCCCTGCTGAAGCCTCTTGGCTTACATGTATTAATGCTAACTAGTGGCCCTTTAGGGCATACATAATTGTAAATAcagt s panTro4.chr4 190300195 1549 + 193495092 AAGAGGACTTTTTAT--CCCCTAAAGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCGGTATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCAGACCACAAATGGACAG---------AGGTAGCTTTGCTCTTAAGA-AGTGA-GTATTTAACCACTAAAAATAGCTTATAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCCTTCTGTGATAAGAAAATTTCAAAGCACATTAGGCACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGTACTTATTTTGGGAATGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCAATCTACAGGCTAAATATACAGTCTGCAGACTGTGTTGGTGGC--TGCAAAGGCATCA--TTTTCCTTGCAGCAAAGCCAGGGCTCCACTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGGCTGTGGG------GCAAGGCCAGACTGAG---GGAGATTCAGGGAGGCCGGTGAGAAAACCAACAGCTGCAGGAAGCAGTGTTCATCAAGTGGAACACGTCTT--GTGG-GGGTTGGAGTATTTGGAAAGATCTCAGAAGATATGCTTTCCTTTTCCTGTCACCAATGAGATATGCCTGGAATTGCT--C--GTTTTGTATATCTTAGAATGGGAAATGTCCAGCTTACAAATTATTTTGAGGTTAATTGCTCTTAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTTCCAAATTGACATCACCCTTTCCTACGTAGTGGGTGAGATCCTATTGTGTCTAGAGATAGAGACAGATCAGGGCTGTCTGTGGCT-GGGAGTGATGGCAGTCTCCAAACAGAGAGGGGTTTCTCTCGCTCCCTGTCGTCCCATCTCAGGCCACAGGTGGGCAGCGGAGCCCAGAGTTAAGTGGGAAGCCATTTG--TGGGCAGACATTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----ATCAGGATTTTCATCATTGTACTCACTTCCAT-TTCGTACCCTA-CCACATCCAGATTGGACCTGTGATGGGAGCTGAGGCTCCTTCTGGGTCTCAGTGTGGGATACTGAAAGTGTCTGAAACG--GTCCTGTGTTGGGTGCTGGGATGATAGCATCAGACACCCAGTGAGTCCTAGCAGTGG------AACCACCTGCCCTGCT-AATCA-GACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCTGTG----GCTAAGT----ATTAC------TGTCTTTTTAAATTC-AAACGTCGTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTGAAAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGGAAGAATTCCCTGCTGAAGCCTCTTGGCTCACATGTATTAATGCTAACTAGTGGCCCTTTAGGGCATACATAATTCTAAATAcagt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195266240 1554 + 198332218 AAGAGGCCTTTTTTT--CCCCTAAAGAAAGCTAGTTTA-TATAGAACTACTGTTATGCCAGTATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAATAGGGCTG----TACAC-TTTGTCAATATTTTGAGATTCTTTTTATTCCCAGACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATTTAACCACTAAAAATAGCTTATAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCCTTCTGTGATAAGAAAATTTCAAAGCACATTAGGGACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGTACTTATTTTGGGAATGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCAATCTACAGGCTAAATATACAGTCTACAGAC--TGTTGGTGGC--TGCAAAGGCATCA--TTTTCCTCGCAGCAAAGCCAGGGCTCAATTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCATGGCTGTGGG------GCGAGGCCAGACTGAG---GGAGCTTCAGGGAGGCCAGTGAGAAAACCAACAGCTGCAGGAAGCAGTGTTCATCAAGTGGAGCACGTCTT--GTGG-GGGTTGGAGTATTTGGAAAGATCTCAGAAGATATGCTTTCCTTTTCCTGTCGCCAATGAG--ATGCCTGGAATTGCT--C--ATTTTGTATATCTTAGAATGGGAAATGTCCAGCTTACAAATTATTTTGAGATTAATTACTCTTAGGGGATGTTTGGCTGTTGCTGCATTTCTGTAGCCTTCCTCTTCCAAATTGACATCACTCTTTCCTATGTAGTGGGTGAGATCCTATTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTCTGTGGCT-GGGAGTGATGGCAGTCTCCAAACGGAGAGGGGTTTCTCTTGCTCCCTGTCATCCCATCTCAGGCCACAGGTGGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----ATCAGGATTTTCATCATTGTACTCGCTTCCCT-TTTGTATCCTA-AAACATCCAGATTGGACCTGTGATGGGAGCTGAGGCTTCTTCTGGGTCTCAGTGTGGGATACTGAAAGTGTCTGAAACG--GTCCTGTGTTGGGTGCTGGGATGGTAGCATCAGACACCCAGTGAGTCCTAGCAGTGGAAGACCAACCACCTGCCCTGCT-AATCA-GACAACTGGAAACACCATTCCAAGT-GATTTGGAGAGAGCTGTG----GCTAAGT----ATTAT------TGTCTTTTTAAATTC-AAACGTCGTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTGAAAATAAGAGGTTAGCTTGTTCATCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGGAAGAATTCCCTGCTGATGCCTCTTGGCTTACATGTATTAGTGCTAACTAGTGACCCTTTAGGGCATATATAATTGTAAATAcact i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111237853 1533 + 115148730 AAGAAGACTTTTTTTTCCCCCTAAAGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAGTATTTTAAGGTGCCAGGTGTATT-TTCTGCTGTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAATAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTCTTCCCAGACCACAAATGGACAG---------AGGCAGCTCTGCTCTTAAAA-AGCGA-GTATTTAATCACTAAAAATAGCTTATAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCCTTCTGTGATAAGAAAATTTCAAAGCACTTTAGGGCCTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGTCCTTATTTTGGGAATGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCAATCTACAGGCTAAATATACAGTCTACAGACTGTGTTGGTGGC--TGCAAAGGCATCA--TTTTCCTCGCAGCAAAGCCAGGGCTGGATTGATGGAAAAA-CAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGGCCGCGGG------GCGAGGCCAGACTGAG---GGAGCTTCAGGGAGGCCAGTGAGAAAACCAACAGCTGCAGGAAGCAGTGTTCATCAAGTGGAGCAAGTCTT--GTGG-GGGTTGGAG-ATTTGGAAAGATCGCAGAAGATATGCTTTCCTTTTCCTGTCGCCGATGAGATATGCCTGGAATTGCT--C--GTTTTGTAAATCTTAGAATGGGAAATGTCCAGCTTACAAATTATTTTGAGGTTAATTGCTCTTAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTTCCAAAGTGACATCACTCTTTCCTACGTAGTGGGTGAGATCCTGTTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTCTGTGGCT-GGGAGTGATGGCAGTCTCCAAATGGAGGGGGGTTTCTCTCGCTCCCTGTCATCCCATCTCAGGCCACAGGTGGGCGGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTACGCCTTCTTCTGCCTCAGG---GGTCTCC-----ATCAGGATTTTCATCATTGTACTCGCTTCCCT-TTCGTACCCTA-CCACATCCAGATTGGACCTGTGATGGGAGCTG------------------AGTGTGGGATACTGAAAGTGTCTGAAACG--GTCCTGTGTTGGGTGCTGGGATGATAGCATCAGACACCCAATGAGTCCTAGCAGTGGAAGGCCAACCATCTGCCCTGCT-AATCA-GACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCTATG----GCTAAGT----ATTAC------TGTCTTTTTAAATTC-AAATGTCGTGT---TA----GTTTTCAGTCTCCTGTAGTTGTAGCCTTCTGAAAACAAGAGGATAGCTTGT---TCAGTTAT-AATGGCTCTAAGGAGAATAGTTGTAGGAGGGGAAGAATTCCCTGCTGATGCCTCTTGGCTTGCATGTATTAATGCTAACGAGTGGCCCTTTAGGGCATACATAATTGTAAATAcagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181041387 1539 + 184069350 AAGAAGCCTTTTTT---CCCCTAAGGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAATATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCACACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATGTAACCACTAAGAATAGCTTGTAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCTTTCTGTGATAAGAAAATTTCAAAGCACATTAGGGACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGCACTTATTTTGGGAACGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCACTCTACAGGCTCAGTATATAGTCTACAGACTGTGTTGGTGGC--TGCAAAGGCCTCA--TTTTCCTCGCAGCAAAACCAAGGCTCAATTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGACTGTGGG------GTGAGGCCGGACTGA----GGAGCTTCAGGGAGGCCAGCGAAAAAACCACCAGCTGCAGGAAGCATTGTTCGTCGAGGGGAGCACGTCTT--GGGG-GGGCTGGAGTATTTGGAAAGATCTCGGAAGATACGCTTTCCTTTTCCCGTCGCCAATGAG--ATGCCTGGAATTTCT--C--GTTCTGTGTATCTTAGAATGGGAAATGTCCAGCTTACAGATTATTTTGAGGTTAATGGCTCTGAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTACCAAACTGACATCGCCCTTTCCTACACAGTGGGCGAGATCCTATTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTTTGTGGCT-GGGAGTGATGGCAATCTCCAAACGGAG-GGGGTTTCTCTCGCTCCCTGTCATCCCATCTCAGGCCACAGGTTGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----AGCAGGATTTTCATCATTATATTCGCTTCCCT-TTCGTACCCTA-CCACCTCCAGACTGGACCTGTGATGGGAGCTGAGGCTCCTTCTGGGTCTCAGTGTGGGATACGGAAAGTGTCTGAGGCA--GTGCTGCGTTGGGTGCCGGGATGACAGCATCAGACACCCAGTGAGTCCTAGCAGTGGAAGACCAACCACCTGCCCTGCT-AATCA--ACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCGCTG----GCTGAGT----ATTAC------TGTCTTTTTAAATGC-AAATGTTGTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTG-AAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGAAAGAATTCCCTGCTGATGCCCCTTGGCTTACATGTATTAATGCTAACTAA---------AGGGCATACATAATTGCAAATAcagt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186378560 1539 + 189454096 AAGAAGCCTTTTTT---CCCCTAAGGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAATATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCACACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATGTAACCACTAAGAATAGCTTGTAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCTTTCTGTGATAAGAAAATTTCAAAGCACATTAGGGACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGCACTTATTTTGGGAACGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCACTCTACAGGCTCAGTATATAGTCTACAGACTGTGTTGGTGGC--TGCAAAGTCCTCA--TTTTCCTCGCAGCAAAACCAAGGCTCAATTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGACTGTGGG------GTGAGGCCGGACTGA----GGAGCTTCAGGGAGGCCAGCGAAAAAACCACCAGCTGCAGGAAGCAGTGTTCGTCGAGGGGAGCACGTCTT--GGGG-GGGCTGGAGTATTTGGAAAGATCTCGGAAGATACGCTTTCCTTTTCCCGTCGCCAATGAG--ATGCCTGGAATTGCT--C--GTTCTGTGTATCTTAGAATGGGAAATGTCCAGCTTACAGATTATTTTGAGGTTAATGGCTCTGAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTACCAAACTGACATCGCCCTTTCCTACACAGTGGGCGAGATCCTATTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTTTGTGGCT-GGGAGTGATGGCAATCTCCAAACGGAG-GGGGTTTCTCTCGCTCCCTGTCATCCCATCTCAGGCCACAGGTTGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----AGCAGGATTTTCATCATTATATTCGCTTCCCT-TTCGTACCCTA-CCACCTCCAGACTGGACCTGTGATGGGAGCTGAGGCTCCTTCTGGGTCTCAGTGTGGGATACGGAAAGTGTCTGAAGCA--GTGCTGCGTCGGGTGCTGGGATGACAGCATCAGACACCCAGTGAGTCCTAGCAGTGGAAGACCAACCACCTGCCCTGCT-AATCA--ACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCGCTG----GCTGAGT----ATTAC------TGTCTTTTTAAATGC-AAATGTTGTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTG-AAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGAAAGAATTCCCTGCTGATGCCCCTTGGCTTACATGTATTAATGCTAACTAA---------AGGGCATACATAATTGCAAATAcagt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175993649 1536 + 178775436 aagaagcctttttC---CCCCTAAGGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAATATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGAACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCACACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATGTAACCACTAAGAATAGCTTATAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GACAGCCCTGCGATTTCCTTTCTGTGATAAGAAAATTTCAAAGCACATTAGGGACTGGAAT---CTATCAGA----CTTCCATTCTGTCCCCAGAGGCACTTATTTTGGGAACGCTTACAGATGATAAAAACATGTTTGTACACTAGCTACTCACTCTACAGGCTCAATATATAGTCTACAGACTGTGTTGGTGGC--TGCAAAGGCCTCA--TTTTCCTCGCAGCAAAACCAAGGCTCAATTGATGGAGAAATCAGATTAGGAACCTCATTAGCCTTTGAAATGCGTGACTGTGGG------GTGAGGCCGGACTGA----GGAGCTTCAGGGAGGCCAGCGAAAAAACCACCAGCTGCAGGAAGCATTGTTCGTCGAGGGGAGCACGTCTT--GTGG-GGGCTGGAGTATTTGGAAAGATCTCGGAAGATACGCTTTCCTTTTCCTGTCGCCAATGAG--ATGCCTGGAATTGCT--C--GTTCTGTGTATCTTCGAATGGGAAATGTCCAGCTTACAGATTATTTTGAGGTTAATGGCTCT---GAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTACCAAACTGACATCGCCCTTTCCTACACAGTGGGTGAGATCCTATTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTCTGTGGCT-GGGAGTGATGGCAATCTCCAAACGGAG-GGGGTTTCTCTCGCTCCCTGTCATCCCATCTCAGGCCACAGGTTGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----AGCAGGATTTTCATCATTATATTCGCTTCCCT-TTCGTACCCTA-CCACCTCCAGactggacctgtgatgggagcTGAGGCTCCTTCTGGGTCTCAGTGTGGGATATGGAAAGTGTCTGAAGCA--GTGCTGCGTcgggtgctgggatgacagcatCAGACACCCAGTGAGTCCTAGCAGTGGAAGACCAACCACCTGCCCTGCT-AATCA--ACAACTGGAAACACCATTCCAAGT-GGTTTGGAGAGAGCGCTG----GCTGAGT----ATTAC------Tgtctttttaaatgc-aaatgttgTGT---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTG-AAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGAAAGAATTCCCTGCTGATGCCCCTTGGCTTACATGTATTAATGCTAACTAA---------AGGGCATACATAATTGCAAATGCAGT i papAnu2.chr5 I 207 C 0 s chlSab2.chr7 132836798 1540 + 135778131 AAGAAGCCTTTTTT---CCCCTAAGGAAAGCCAGTTTA-TATAGAACTACTGTTATGCCAATATTTTAAGGTGCCAGGTATATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCAATAGGACAGGGCTG----TACAC-TTTGTCGATATTTTGAGATTCTTTTTATTCCCACACCACAAATGGACAG---------AGGCAGCTTTGCTCTTAAGA-AGCGA-GTATTTAACCACTAAGAATAGCTTTTAGAATGTGAAGTCACCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGCCCTGCGATTTCCTTTCTGTGATAAGAAAATTTCAAAGCACATTAAGGACTGGAAT---CTATCAGA----CTTCCATTCCGTCCCCAGAGGCACTTATTTTGGGAACGCTTACAGATGATAAAAACATGTTTGTACACTAACTACTCACTCTACAGGCTCAATATATAGTCTGCAGACTGTGTTGGTGGC--TGCAAAGGCCTCA--TTTTCCTCGCAGCAAAACCAAGGCTCAATTGATGGAGAAATCAGATTAGGAACCTCATTGGCCTTTGAAATGCGTGACTGTGGG------GTGAGGCCGGACTGA----GGAGCTTCAGGGAGGCCAGTGAAAAAACCACCAGCTGCAGGAAGCAGTGTTCGTCGAGGGGAGCATGTCTT--GTGG-GGGCTGGAGTATTTGGAAAGATCTCGGAAGATACGCTTTCCTTTTCCTGTCGCCAATGAG--ATGCCTGGAATTGCT--C--GTTCTGTGTATCTTAGAATGGGAAATGTCCAGCTTACAGATTATTTTGAGGTTAATGGCTCTGAGGAGATGTTTGGCTGTTGCTGCATTTTTGTAGCCTTCCTCTTCCAAACTGACATCAGCCTTTCCTACACAGTGGGTGAGATCCTATTGTGTCTAGAGATAGAGACAGGTCAGGGCTGTCTGTGGCT-GGGAATGATGGCAATCTCCAAACGGAG-GGGGTTTCTCTCGCTCCCTGTCATCCCATCTCAGGCCACAGGTTGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACACTAGCTGTGCCTTCTTCTGCCTCAGG---GGTCTCC-----AGCAGGATTTTCATCATTATATTCGCTTCCCT-TTCATACCCTA-CCCCCTCCAGACTGGACCTGTGATGGGAGCTGAGGCTCCTTCTGGGTCTCAGTGTGGGATACGGAAAGTGTCTGAAGCA--GTGCTGCATCGGGCGCTGGGATGACAGCATCAGACACCCAGTGAGTCCTAGCAGTGGAAGACCAACCACCTGCCCTGCT-AATCA--ACAACTGGAAACACCATTCCAAGT-GGTTGGGAGAGAGCACTG----GCTGAGT----ACTAC------TGTCTTTTTAAATGC-AAATGTCGTGA---TAGTTTGTTTTCAGTCCCCTGTAGTTGTAGCCTTCTGAAAATAAGAGGATAGCTTGT---TCAATTAT-TATGGCTCTAAGGAGAATAGTTGTAGGAGGGAAAGAATTCCCTGCTGATGCCCCTTGGCTTACATGTATTAATGCTAACTAA---------AGGGCATACATAATTGCAAATAcagt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188220311 1545 - 190850796 TAGATGCCTTTTTC---CCCCCCAGAAAATCCAGTTTCTTATGGAACCACTGTAATACCAGTATTTTAAGGTGCCAGGTGTATT-TTCTGCTCTGATGAAAT-----ATTTAGGTAATTTCTAGCCAGACAAGATCTATAGAATAGGGCTG----TACAC-TTCGTCGATATTTTGAGATTCTTTTTGTTCCCAGACCACAAATGGACAG---------AGGCAGCTTTGCTCATAAGA-AGAGA-GTATTTAACCACTAAAAATAGCTTACAGAATGTGAAGTCCCCAAAAAGATATCTTGAG-----CATGGGAAAAA-GAGAGACCTGTGATTTCTTTTCTGCAGTAAGAAGATTTCAAAGCACATTAGGCAGTGGAAT---CTATTGGA----TTGCCATCCCGTCCCCAGAGGCACTTATTTTGGGAATGCTTATGGATGTTAAAAACATGTTTGTACACTAACTACTCAATCTACAGGCTAAATATATAGTCTAGAGACTGTGTTGGTGGC--CGCAAAGGCGACATTTTTTCCTCGCAGCAGAGTCAGAGCTCAGCTGGTGGAGAAATCCGAGTGGGAACCTCATTAGCCTTTGAAATGCGTGGCTGTGAG------GTGAGGCCAGACTGAG---GGCGCTTCAGGGAGGCCAGTGAGAAAAGCCGCAGCTACAGGAAGTCGTGCTCATCAAGCGGAGCACGTCTTGGGCGG-GGGTTGAAGTATTTGGGAAGATCTCAGAATATGCA-----CTTTTCCTGTCTCCGGTGAG--ACCCCTGGAATTGCC--T--GTTCTGTCCATCTTAGAATGGGGAGTGTCCAGCTCACAAGCGATGCTGAGGTTAATTGCTCTCAGGACATGTTTCGCTGCTGCCACAGTTTCGCAG----CCTCTTCGCAATTGTCATCGCCC-TTCCTA-GAAGTGGGTGAGATCCTGCTGTGTCTACAGATAGAGACGGGTCAGGGCCATCTGTAGCTGGGGACTGATGGCAATCTCCAGATGGAGAGGGGCTTCCCGTGCTCCCTGTCGTCCCATCTCAGGCCACAGGTTGGCAGCGGAGCCCAGGGTTAAGTGGGAAGCCATGGG--TGGGCAGACATTAGCTGTGGCATCTTCTGCCTCA-G---AGTCTCC-----ATCAGGATTTTCGTAATTTTACTCCCTTCCCT-TTTGTACTCTA-CTACAACCAGATTGGACCAGTGATGGGAGCTGAGGCTGCTTCTGGGTCTGAGCGCAGGACACTGACGGTGTCTGAAAGG--GTGCTGCGTTGGGTGCTGGGATGATAGCATCAGACACTCAGCGAGTCCTAGCAGTGGAAGACAAGCCACCTGCCCTGCT-AATCG-GACAACCAGAAACGTCTTTCCAAGT-GGCTTGGAGAGAGCCGTG----GCCAAGT----ATGAC------TGTCTTTTAAAAAACGAAATGTCGTGT---TAGTT--TTTTCAGTCCCTTGCAGTTGTAGCCTTCTGGAAATCAGAGGATAGCTTGT---TCAACTAT-TACAGCTCTAAGGAGAATAGTTGTAGGAAGGAAAGAATTCCCTGCTGGTACCTCTTGGCTTACATGTCTTGATGCTAAATGGTGGCCCTTTAGGGCATATATAATTGTAAATAcagt i calJac3.chr3 C 0 C 0 s mm10.chr8 84705772 1447 - 129401213 TAAATGTCTCTTTG---CATT------AAGTCAGCCTT-TACACAAGTGCTGTTACACCTGTGTTGGAAGATGCTGAGAATCTTCCTTCACTTTGATGAAA---------TAGGTGATTTCTCGCCAGAGAAGATCAATAGAATAGAGCTG----AACAT-TTTGTCGATATATTGAGACTC-TTTTATTCACAGTCTACAAACAGACAG---------AGTCA------CTCTTCAGC-AGCCAGGCGTTTAACCACTAAATATAGCTCACAGAATGTGAAGTCACCAAAAAGACATCACAAG-----CATGGGAAAACTGAGAGCCCCGTGATTTGCTTTCTGCGATAAGACTATTTCAAAGTACTTCGGGGACTGGAATGAGACATCAGA----CTCCCGGGCGGTCTCTAGAGGCCCTTATTTTGGGAACACTTACAGAAGATAAAAACATGTTTGTACACTAAAGACTCAGAAAAGGG----AATACGTGCTCTGCTGGCTGCATCTGTGGT--AGCAAAGGAAGCA------------GGCA---------CTCACTGTGTGTATAAATCAGACCGGGCACTTCATTAGCCTTCCAAATGTCTGACTGAGAGAACCCAGTGAGATCAAGGTGA----GGAGAGGCCGGGGAG-----AAGAAAATGAGCAGCTGCAGGAATTAGTGTTAATCAAG---------------TTGA-GGACCGGAGCATTTGG-AAGAGCTTGGCATCCACGCGCGCCTTTTCCTGTCTCCTATTTA--ATCCCTGGAATTTCTCAC--GTCTTGTGTATTTTAGAATGGGAAGTGCCCAGCTTAGAAATTATTTTAAGTTCCTTTGTGCACAAAGGACGCCTGACT------ACATTTCTGAAGTCTTTCTTCTCTATACTAAC--------------------TGATAAGAGCCCACTGTGTCTATTGAT----------------------------GGGAATGGTGGTAAACTCCAGATGGGGCTTGGATTCAC---CTCTCTGCCTGTCCATCTCTGACT-CGAGTTAGCAGTGGAGCC--------AGTGAGAGATGATGGG-ATGGG-----GCTGGTGGCAGCTCCTGCAGCCTCAAC---TGTCTGCAGAAGAGAAGGATCTGTAGGTTGATGCCCTCTTCCCT-TTTGCAACCGT-CC-CAGGCAGACTGGGTAGGTGGTAGAAGC-AAGGCTTATTCTGGGTCTTAGCACGTGGTTCTGAACGAGATTTAAATACCGCACTGATGCACCTGCTGGCCTAATA------GACATCCAGTGCGTTCTAGGATCGGAAGGCTTAAAGCCCTCCTTGCTAAATCAAGACAATCAGAAACTCCATTTGAAGT-ATTTGGGGGAGAGCCGGGGAATGCTAGGA----TGAACAGGCAGTGTCTATTTTTATGT-AAATTCTGTATTCCTATCTTCTTTTTAGACCCCTCTAGGTATAGCCTGCAGAAAATGAGAATATAGCCTGC---TCAATTAT-TACAGCTCTAGGGAGAGTCCCTGCAGGAAGGGAAACATCTCCAACTGGT---TCTTGGCTTACATGTATTAGTGATACTTTGTGGCTCCTTAGGACATATATAACTGT-AATATAGT i mm10.chr8 I 2 I 323 s canFam3.chr16 15713975 1509 - 59632846 AGTATGCCTTTAAA---AAAAAAAAAAAAACCAACTCC-----------CTGTGACACCAATATTTTAGGCCTCCAGGTATATC-TTCCGCTCTGACCAAATTGAAGATTGGGGTGGTTTCTGGCCAGAGAAGCTCAGTAGAATAGGGCTGCCAATATACATTTGTCAATATATTGAGATACTTTTTATTCCCAGGCCACAAATGTATGGGCGGGGGGTGGGAAGCATTGCTCTGGGGATGGAGA-GTACTTAACCA-TAAAAATAGCTCAGAGAATGTGAAGTCACCGAAAAGACACCACGAGCTTCTCGTGGGAAAAC-CAGAGCCCCGTGATTGGCCTTCTGTGATAAGAAAATTTCAAAGTACATTAGGGACGGGGCTGGGACATCAGACTGGCTCTCATCCCTTCCCCAGAGGCG-TTATTTTGGGAATGCTTACAGATGATAGAAACATGTTTGCCCACGAA-----------ATGGAAAGAAAGTGCACCCTACTGGCTGTGTTAGTGGCCATGAAAAGGCAGCG----TGCCTCCCAGGGAGGCCAGGGCTGCAATG-TGGAGCCATCAGATGAGGA----CATCGCCCTCTCGGGTGCCTGGC------------ATGAGGCCTGGCTGTGCCAGGGGAAGGGGAAAAGCCAGGCGGAAAACCCACAGCCACAAGAATTAGTGGAAATC-AGTGGCATGTGTCTC--ATGGCTGATCTGAGCAGGTGGAAAGATTT------------TCTCCTTTGCCCATCTCCCATCA---ATCCCTGG-GCTGCC--CAGGTCACGCATAGCCTGCCCTGGG-AGTGTCT-GCATGGAAATGGTTTCCAGGCTCATGGCCCTTGGGGGACATTTGGGTATTGTCATGTTCCTGTAGCCCCC-----CCAAAGGGCTATGGTCCCCTCCTGTGCAATC-CTAAGCCCCCACC-CCTCTGGGCACAGAACCAGGGGTGGG--GCCTGTAGCT-GGAAGGGGAGGCAAAATCAGAACAGGGAGAGG-----CTGGTTCCCTGTCCTCCCAGCTCAGGCCACAGGTTGGCAGTGGTGCCCAGCGTT-AGTGGGGAGGAATGGGGGTGGGCC-ACAGGAGCCCCGGCTTCTGCAGCCTGGGGTGCTGTGTCC-----GTCGGGGTGTCCCTAACTGCACTGGCTTCCCTGCTTACGCCCTGTCCCCAAACAGACTGGACCTGGGGCAGGAGCTGAGGC---TTCTGGCTCTGAGCTCGGGGCCTGGGAAG-GTCTGA-GCG--CTGCTGTGCT-CGTCTCACCACAACAGAATCAGACATC----GAGTCCCAGGAATGGAAGACAGACCACCAGGCCTGTT-CTTGG-GACAACCAGAAACTCCATTTGAAGTCATTTTGGGGAGAGCTGGA----GATTAATCAACATGAA------TGTTGATTTTTATGT-AAATATC-TAT---GAGTTTGTTTCTGGTCTGCTGGAGTCGTAGCCTGTAGAAAATCAGAGCCTGGCTCGT---TCAATGATGAACAGCTCTCACAGAGAAGACTGTGGCAAGGAAAGACTTCCCTGCGCACCCCCCTGGGCTTTCAGGAACCAGTGCTACCTT----------AGGACATACAGAA----ACATACA-- i canFam3.chr16 C 0 C 0 a score=244797.000000 s hg38.chr4_KI270785v1_alt 29305 100 + 119912 tatgtactgcttaacaagaatactctgag----------------------------------aaatgtgtcattaggtgattttgtcatgcaaacatcatagagtgcacttatacaaacttagatggcatagc s panTro4.chr4 190301744 100 + 193495092 tatgtactgcttaacaagaatactctgag----------------------------------aaatgtgtcgttaggtgattttgtcatgcaaacatcatagagtgcacttatacaaacttagatggcatagc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195267794 100 + 198332218 tatgtactgcttaacaggaatactctgag----------------------------------aaatgtgtcattaggtgattttgtcatgcaaacatcatagagtggacttacacaaacttagatggcatagc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111239386 98 + 115148730 tatgtactgcttaacagcaatactctgag----------------------------------aa--gtgtcattaggtgattttgtcatgcaaacatcatagagtgcacttgcacaaacttagatggcatagc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181042926 134 + 184069350 tatgtactgcttagcgggaatactctgagaaatgtatcattaggtgattAggaatactctgataaatgtatcattaggtgattttgtcatgcaaacatcatagagtgcacttacacacacctagatggcatagg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186380099 100 + 189454096 tatgtactgcttagcaggaatactctgag----------------------------------aaatgtatcattaggtgattttgtcatgcaaacatcatagagtgcacttacacacacctagatggcatagg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175995185 100 + 178775436 TATGTACTGCTTAGCAGGAATACtctgag----------------------------------aaatgtatcattaggtgattttgtcatgcaaacatcatagagtgcacttacacataCCTAGATGGCATAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838338 100 + 135778131 tatgtactgcttagcaggaatactctgag----------------------------------aaatgtgtcattaggtgattttgtcatgcaaacatcatagagtgcacttacacacacctagatggcatagg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188221856 98 - 190850796 tatgtgctacttaacaggaacactctgag----------------------------------aaatgt-tcattcagcgactttgtcatgcaaacatcacagagtacgc-tacagaaacccagatggcaccac i calJac3.chr3 C 0 I 565 s canFam3.chr16 15715484 6 - 59632846 --------------------------------------------------------------------------------------------------------------------------------CATAGC i canFam3.chr16 C 0 C 0 e mm10.chr8 84707219 323 - 129401213 I a score=8595.000000 s hg38.chr4_KI270785v1_alt 29405 2 + 119912 ct s panTro4.chr4 190301844 2 + 193495092 ct i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195267894 2 + 198332218 ct i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111239484 2 + 115148730 ct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181043060 2 + 184069350 ct i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186380199 2 + 189454096 ct i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175995285 2 + 178775436 CT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838438 2 + 135778131 ct i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188222519 2 - 190850796 ct i calJac3.chr3 I 565 C 0 s canFam3.chr16 15715490 2 - 59632846 CT i canFam3.chr16 C 0 I 37 e mm10.chr8 84707219 323 - 129401213 I a score=325657.000000 s hg38.chr4_KI270785v1_alt 29407 124 + 119912 actacacacggaggctgtatggtacagcctgtagatcctgggtaacaaacctctacagca-cgttaccgtactgaatactgtaacacaatggtaagtatttgtgtatctaaatatatctaaacat s panTro4.chr4 190301846 124 + 193495092 actacacaccgaggctgtatggtacagcctgtagatcctgggttacaaacctctacagca-cgttaccgtactgaatactgtaacacaatggtaagtatttgtgtatctaaatatatctaaacac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195267896 124 + 198332218 actacacatggaggctgtatggtacagcctgtagatcctgggctacaaacctctacagca-cattgccgtactgaatactgtaatacaatggtaagtatttgtgtatctaaatatatctaaacat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111239486 124 + 115148730 accacacgcggaggctgtatggtacagcctgtagatcctgggctacaaacctctgaaaca-tgttgccgtactgaatactgtaacacaatggtaagtatttgtgtatctaaatatatctaaacat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181043062 121 + 184069350 attacacacggaggccacatggtacagcctgtagatcctgggccacaaacctgtacagcgttgttgctgtactgaatactgtaacgccatg----gtatttgtgtatctaaatctatctaaacat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186380201 121 + 189454096 attacacacggaggccacatggtacagcctgtagatcctgggccacaaacctgtacagcgttgttgctgtactgaatactgtaacgccatg----gtatttgtgtatctaaatctatctaaacat i macFas5.chr5 C 0 I 265 s papAnu2.chr5 175995287 121 + 178775436 ATTACACACGGAGGCCACATGGTACAGCCTGTAGATCCTGggccacaaacctgtacagcgttgttgctgtactgaatactgtaacGCCATG----GTATTCGTGTATCTAAatctatctaaacat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838440 120 + 135778131 attacacacggaggccacatggtaccgcctgtagatcctgggctacaaacctgtacagcg-tgttgctgtactgaatactgtaacgccatg----gtgttcgtgtatctaaatctatctagacat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188222521 124 - 190850796 gctagacgctgaggccgtgtggtacagcccgtagatcctgggctacaaacctgtacagcc-tgttgctgtgctgaatactgtaacgtgatggtaagtgtttgtgtgtctaaatgtatctaaacat i calJac3.chr3 C 0 C 0 e canFam3.chr16 15715492 37 - 59632846 I e mm10.chr8 84707219 323 - 129401213 I a score=159642.000000 s hg38.chr4_KI270785v1_alt 29531 58 + 119912 agaaaaggtagagtaaaaatacagtatcatcatcttatggggccaccatcctatgtcg s panTro4.chr4 190301970 58 + 193495092 agaaaaggtagagtaaaaatacagtatcatcatcttacgggaccaccatcctatgtcg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195268020 58 + 198332218 agaaaaggtagagtaaaaatatagtattatcatcttatgggaccacaatcctatgtcg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111239610 58 + 115148730 agaaaaggtagagtaaaaatacagtattatcatcttatgggaccaccatcctatggtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181043183 57 + 184069350 agaaaaggtacagtaaaaat-cagtattgtcatcttatgggaccaccatcctatggcg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186380587 57 + 189454096 agaaaaggtacagtaaaaat-cagtattgtcatcttatgggaccaccatcctatggcg i macFas5.chr5 I 265 C 0 s papAnu2.chr5 175995408 57 + 178775436 agaaaaggtacagtaaaaat-caGTATTGtcatcttatgggaccaccatcctATGGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838560 57 + 135778131 agaaaaggtacagtaaaaat-cagtattgccatcgtatgggaccaccatcctatggcg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188222645 58 - 190850796 agaaaaggtacagtaaaaatacaatattatcatctcatgggacccccatcctgtggcg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15715492 37 - 59632846 I e mm10.chr8 84707219 323 - 129401213 I a score=1103165.000000 s hg38.chr4_KI270785v1_alt 29589 365 + 119912 atccattgctgaccaaaatgtcgttatgtggcgcgtgactgTATAATCCTGTTTCACCTGTAACAGCCGTGTGA-TTTTGTGGCTCATATCTTTATATAAATAGCAGGTTAGTGcttactggctgtatgtccttgggcagtcacttaatgtttctgagccactgtgtccccacctgtgaatataggagtaGC-ACACCATTCAAGAGTTTTATTAGAAATCAAGCAATGTGCT-ATTATGTTTACCGTGTAGCAGGTATGCA-------AGCAGTATACACAATTAATTATTATTAATT-AAATCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGAGGCTTCCGTTTCCGTAGTTCCCAATCTT s panTro4.chr4 190302028 365 + 193495092 atccattgctaaccaaaatgtcgttatgtggcgcgtgactgTGTAATCCTGTTTCACCTGTAACAGCCGTGTGA-TTTTGTGGCTCATATCTTTATATAAATAGCAGGTTAGTGcttattggctgtatgtccttgggcagtcacttaatgtttctgagccactgtgtccccccctgtaaatataggagtaGC-ACACCATTCAAGAGTTTTATTAGAAATCAAGCAATGTGCT-ATTATGTTTACCGTGTAGCAGGTATGCA-------AGCCGTATCCACaattaattattattaatt-aaatCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGAGGCTTCCGTTGCCCTAGTTCCCAATCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195268078 365 + 198332218 atccattgctgaccaaaatgtcgttacgtggtgcatgactgTATAATCCTGTTTCACCTCTAACAGCCGTGTGA-TTTTGTGGCTCATATCTTTATATAAATAGCAGGTTAAcacttcttggctgtatgtccttgggcagtcacttaatgtttctgagccactgtgtccccacctgtaaatataggagtagc-acaccattcaagggttttattagaaatcaaacaatgtgct-attatatttacagtgTAGCAGGTATGCA-------AGCAGTATACACaattaattattattaatt-aaatCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGCGGCTTCTGTTGCCCTAGTTTCCAATCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111239668 364 + 115148730 atccattgctgaccagaatgtcgttatgtggcacgtgactgTATAATCCTGTTTCACCTGTAAGAGCCCTGTGA-TTTTGTGGCTCCTATCTTTATATAAATAGCAGGTTAGcgcttattggctgtatgtcctt-ggcagtcacttaatgtttctgagccactgtgtccccacctgcaaatataggagtagc-acaccattcaagggttttattagaaatcaaacaatgtgct-attatatttaCCGTGTAGTAGGTATGCA-------AGCAGTATACACAATTAATTATTATTAATT-AAATCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGCGGCTTCTGTTGCCCTAGTTCCCAATCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181043240 363 + 184069350 atccattgctgaccaaaatgtcgttatgtggcacgtgactgTATAACACTGTTTCACCTGCAACAGCCGTGTGA-TTTTAGGGCTCATAGC--TATGCAAACAGcaggtcagcgctaagtggctgtatgtgcttgggcagtcacttagcgtctctgagccactgtgtccccacctgtaaaTACAGGAGAAGC-TCACCATTCAAGGGTTATATTAGAAACCAAACAATGTGCT-ATTATATTTACCATGTAGCAGGTATGCA-------AGGAGTATGCACaattaattattattaatt-aaatCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGTGGCTTTTGTTGCCCTGGTTCCCAATCTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186380644 363 + 189454096 atccattgctgaccaaaatgtcgttatgtggcacgtgactgTATAACACTGTTTCACCTGCAACAGCCGTGTGA-TTTTAGGGCTCATAGC--TATGCAAACAGcaggtcagcgctaagtggctgtatgtgcttgggcagtcacttagcgtctctgagccactgtgtccccacctgtaaatataggAGAAGC-TCACCATTCAAGGGTTATATTAGAAACCAAACAATGTGCT-ATTATATTTACCATGTAGCAGGTATGCA-------AGGAGTATGCACAATTAATTATTATTAATT-AAATCTCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGTGGCTTTTGTTGCCCTGGTTCCCAATCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175995465 363 + 178775436 ATCCATTGCTGACCAAAATGTCGTTATGTGGCATGTGACTGTATAACGCTGTTTCACCTGCAACAGCCGTGTGA-TTTTAGGGCTCATAGC--TATGCAAACAGCAGGTCAGCGCTAATTGGCTGTATGTGCTTGGGCAGTCACTTAGCGTCTCTGAGCCACTGTGTCCCCACCTGTAAATATAGGAGAAGC-TCACCATTCAAGGGTTATATTAGAAACCAAACAATGTGCT-ATTATATTTACCATGTAGCAGGTATGCA-------AGGAGTATGcacaattaattattattaatt-aaatctCAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGTTGCTTTTGTTGCCCTAGTTCCCAATCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838617 362 + 135778131 atccattgctgaccaaagtgtcgttatgtggcacgtgactgTATAACGCTGTTTCACCTGC-ACAGCCGTGTga-ttttagagctcatatc--tgtgcaaacagcaggtcagcgctaattggctgtatgtgcttgggcagtcacttcgcgcctctgagccactgtgtccccacctgtaaatataggAGAAGC-TCACCATTCAAGGGTTATATTAGAAACCAAACAATGTGCT-ATCATATTTACCATGTAGCAGGTATGCA-------AGGAGTATGCACAATTAATTATTATTAATT-AAATCTTAGGTGCTCCTGTAATTT--ACTCCTGTTAATCATTACTAGGGTGGCTTTTGTTGCCCTAGTTCCCAATCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188222703 362 - 190850796 atccactcctggccaaaatgtcgttatgtggtgcatgactgTATAGCCCTGTTTCACCTGTAACAGCCCTGTGATTTTTATGGCTCATATC----TTTAAATAGCAAGTTAGTGcttattacctatacgtccttgggcagtcacttaaggtctctgagccactgggtccccacctgtaaatataggagtagc-acatcattcaagagctttattagaaataaaacaatgagct-attatatttaCCGTATAGCAGGTATGCA-------AGTGGCATGCGCAATTAGTTATTATTAATT-AAATCTCAGGTGCTCCTGTGACTG--ACCCCTGTTAATCATTACTAGGGCAGCTTCAGTTGCCCTAATTGCCACTGTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15715529 305 - 59632846 GTCCATCTCTGCAGAAAGAGTAGTT------------------CAaccttggtt---------------tgaga-tcctgcccctccta-------------------------cttactagatagatgtccacgggcagtcacttaacaactctgaacgcctctgcactca-ctgtacaaataggagcagtaatactgatgagaaattttattagaaataatataatgtgttgatgatatctaccacgtagcaggtattcaataagtCAGAGGTATGtataattaattattattaattGAAATCTCAGGTACTCCTGTATTTTTCACTCCTGTTAATCAGGATAGAGG-------------CCTAGTCCCCAATCTT i canFam3.chr16 I 37 C 0 e mm10.chr8 84707219 323 - 129401213 I a score=4761836.000000 s hg38.chr4_KI270785v1_alt 29954 1654 + 119912 TTTAAAAattgattgctaatatttgtacatattcacatgggacgtgtgatatttggatacatgcatagaatgtgtaatgatcagggtatttaagataaccatctccctgagcatttatcatttctttatgttgaggatatttcatatcttctcttctagttattttgaaatgtacaataaattattgttaactatagtcaccctactgtgttactggacgctagaatgtatttcttctctccaactgtatgtttgtaccccttaaccagcctcccttcatctctcctgccaccccctttcccagcttcttgtaagtgtcattccactctccacctccatgagatcatctttttttgctcccatatataagtaagaacatgtggtatttgtctttttgtgcctggcctatttctctgaac-ataatgacctccagttccacccatggtgctgaaaatgacaggatttcattctttattatggctgaataatatttaattgtgtatgtatactccattttctttatccacttgttcgttgatggatacttaggttgattccatgtctttgctattgtgaataatgcggcaataagcatgggggtgcaggtatctctctcttatactgatttcctttcctttggataaattacccactaatgaaattgctatattgtatcgtagttttacgttcagtttttttttgagaaatctcc-----attttacataatgactgtactaatttacaatcccaccaacagcatccttgccggtatctattttttggcttcctgttagtagccaatcttactggggcaagacaatc-ctcattgcggctttgatttgcattttcctggtgactagtgattctgagcattttttcatatacctgtttgtcatttgtatgtcttttttaaagaaatgtctgtttagatcccttgcccatttttagtgggattatttgttgttgttttgttgttgagtaatctgagtttcttgtatattttggatatcagacctttgtcagatgaatagtttgcatatattttcttccactcaagaggttgtgtcttcactctgttggtagtttcctttgttgtgcagaag---tttagt-ttaacata--gtttcgtttgtctattttttgtttcctgtacttttaaggtcttagccataaaatctttgcctaaatcaaggtccttgagtgtttct-----------cctgtat-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatatggtgagagataggggtctagtttcattcttctgcatatgaatgtccagtttttccagcaccatttgttggacagaatgtcctttccccagcatatattcttgatgccttttttcaaaagtcagttggctataagtacatggatttagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgcagtagccttatagcatattttgaagccaggcagggtgatgcttccagctttgttctttttgctcaggattgctttggctatttgggctcctttttgattccaaacaaattttaagactgttttttctattactgagaaaaatgtcattCCAGTCTG s panTro4.chr4 190302393 1657 + 193495092 TTTAAAAattgattgctaatatttgtacatatttacatgggacgtgtgatatttggatacatgcatagaatgtgtaatgatcagggtatttaagataaccatctccctgagcatttatcatttctttatgttgaggatatttcatatcttctcttctagctattttgaaatgtacaataaattatcgttaactatagtcaccctactgtgttactggacgctagaatgtatttcttctctctaactgtatgtttgtaccccttaaccagcctcccttcatctctcctgccaccccctttcccagcttcttgtaagtgtcattccactctccacctccatgagatcatctttttttgctcccatatataagtaagaacatgtggtatttgtctttctgtgcctggcctatttctctgaac-ataatgacctccagttccacccatggtgctgaaaatgacaggatttcattctttattatggctgaataatatttaattgtgtatgtatactccattttctttatccacttgttcgttgatggatacttaggttgattccacgtctttgctattgtgaataatgcggcaataagcatgggggtgcaggtatctctctcttatactgatttcctttcctttggataaattacccactaatgaaattgctatattgtatcgtagttttactttcagtttttttttgagaaatctccatactattttacataatgactgtactaatttacaatcccaccaacagcatgcttgccggtatctattttttggcttcctgttagtggccaatcttactggggcaagacaatc-ctcattgcggctttgatttgcattttcctggtgactagtgattttgagcattttttcatatacctgtttgtcatttttatgtcttttttaaagaaatgtctgtttagatcccttgcccatttttagtgggattatttgttgttgttttgttgttgagtaatttgagtttcttgtatattttggatatcagacctttgtcagatgaatagtttgcatatattttcttccactcaagaggttgtgtcttcactctgttggtagtttcctttgttgtgcagaag---tttagt-ttaacata--gtttcgtttgtctattttttgtttcctgtacttttaaggtcttagccataaaatctttgcctaaatcaaggtccttgagtgtttct-----------cctgtgt-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatatggtgagagataggggtctagtttcattcttctgcatatgaatgtccagtttttccagcaccatttgttggacagaatgtcctttccccagcatatattcttgatgcc-tttttcaaaagtcagttggctataagtacatggatttagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgcagtagccttatagcatattttgaagccaggtagggtgatgcttccagctttgttc-ttttgctcaggattgctttggctatttgggctcctttttgattccaaacaaattttaagactgttttttctattactgagaaaaatgtcattCCAGTCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195268443 1650 + 198332218 TTAAAAAATTGATTGCAaatatttgtacatatttacatgggacatgtgatattttgatacatgcatagaatgtgtaacgatcagggtatttaggataaccatctccctgagcatttatcatttctttgtgttgaggatatttcatatcttctcttctagctattttgaaatatacaataaattattgttaactatagtcaccctactgtattattggacaataggatgtatttcttctctctaactgtatgtttgtaccccttaaccagcctcccttcatccctcctgccacctcctttcccagcttcttgtaagtgtcattccactctctacctccatgagatcatctttttttgctcccacatataagtaagaacatgtggtatttgtctttctgtgcctggcctatttctgtgaacaataatggcctccagttccacccatggtgctgaaaatgacaggatttcattctctattatggctgaataatatttaattgtgtatg-----tccgttttctttatccacttgttcgttgatagacacttaggttgattccacgactttgctattgtgaatagtgctgcaataagcatgggggtgcaggt-tctctttcttatactgatttcctttcctttggataaattacccactaatgaaatggctatattgtatcgtagttttaatttcag-ttttttttgagaaatctccatactattttacataatgactgtactaatttacaatcccaccaacagcatccttgccagtatctattttttggcttcctgttagtagccaatcttactggggcaagaaaatc-ctcattgcggctttgatttgcattttcctggtgactagtgattttgagcattttttcatatacctgtttgttatttgtatgtgttttttaaagaaatgtctgtttagatcccttgcccatttttagtgggattatttgttgttgttttgctattgagtaattt--gtttcttgtatattttggatatcagacgtttgtcagataaatagtttgcatatattttcttccattcaagaggttgtatcatcactctgttggtagtttcctttgttgtgcagaag---tttagt-ttaacata--gtttcgtttgtctgttttttgtttcctgtacttttaaagtcttagccataaaatctttgcctaaatcaaggtccttgagtgtttct-----------cctgtgt-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatatggtgagagataggggtctagtttcactcttctgcatatggatgtccagtttttccagcaccatttgttggacagaatgtcctttccccaacgtatattcttgacgcc-tttttcaaaagtcagttggctataagtatatggatttagttctgggttctttattctgttccactggtctatgtgtctttttacaccaataccatgctgttttgtttgcagtagccttacagcatattttgaagccaggtagtgtgatgcttccagctttgttctttttgttcaggattgctttggctgtttgggctcctttttgattccaaacaaattttaagactgttttttctattactgtgaaaaatgtcattCCAGTCTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111240032 1648 + 115148730 TTTAAAAATCGATTGCtaatatttgtacatatttacatgggacatgtgatattttgatacatgcatagaatgtgtaatgatcagggtatttaggataaccatctccctgagcatttatcatttctttgtgtcgaggatatttcata-----tcttctagctattttgaaatatacaataaattattgttaactatagtcaccctactgtgttattggacgatagtatgtatttcttctct----ctgtctatttgtaccccttaaccagcctcccttcattcctcctgccatctcctttcccagcttcttgtaagtgtcattccacactccacctccatcagatcatctttttttgcccctacatataagtaagaacatgtggtatttgtctttctgtgcctggcctgtttctctgaac-ataatgacctccagttccacccatggtgctgaaaatgacaggatttcattctccattatggctgaataatatttaattgtgtatgtatactccattttctttatccacttgttcgttgatggacacttaggttgattccacgtctttgctattgtgaataatgctgcaataagcatgggggtgcaggtatctctttcttatactgatttcctttcctttggataaattacccactagtgaaattgctatattgtatcttagttttactttcag-ttttttttgagaaatctccatactattttacataatgactgtactaatttacaatcccaccaacagcatccttgccagtatctattttttggcttcctgttagtagccaatcttactggggcaagacaatc-ctcattgtggctttgatttgcatttttctggtgactggtgattttgagcattttttcatatacctgtttgtcatttgtatgtcttttttaaagaaatgtctgtttagatcccttgcccatttttagtgggattacttgttgttattttgctgttgagtaatttgagtttcttgtatattttggatatcagacctctgtcagatgaatagtttgcatatattttcttccattcaagagcttgtgtcttcactctgttggtagtttcctttgttgtgcagaag---tttagt-ttaacata--gttccatttgtctattttttgtttcctgtacttttaaggtcttagccataaaatctttgcctaaatcaaggtccttgagtgtttct-----------cctgtgt-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcatttttagttgatttttgcatatggtgagagataggggtctagtttcattcttctgcatatggatgtccagtttttccagcaccatttgttggacagaatgtcctttccccaacgtatattcttgacgcc-tttttcaaaagtcagttggctgtaagtacatggatttagttctgggttctctattctgttccactggtctatgtgtgtttttataccaataccatgctgttttgtttgcagtaaccttatagcatattttgaagccaggtagtgtgatgcttccagctttgttctttttgctcaggattgctttggctatttgggctcctttttgattccaaacaaattttaagactgttttttctattaccatgaaaaatgtcattCCAGTCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181043603 1650 + 184069350 TTTAAAAattgattgctaatatttgtacacatttacatgggacatgtgatattttgatacatgcatagaatttgtaatgatcagggtatttaggataaccatctccctgagcatttatcatttctttgtgttgaggatatttcgtatcttctcttctagctattttgaaatatacaataaattattgttaacgctagtcaccctactatgttattggatgataaaatgtatttcttctctctaactgtatgtttgtaccccttaaccagcctcccttcatccctcctgccactccctttcccagcttct----ggtgtcgttctactctccatctccatgagatcgtcttgttttgctcccacatatcagtaaaaacatgtggtatttgtgtttctgtgcttggcctatttctctgaac-ataatgacctccagtaccacccatgtcactgaaaatgacaggatttcattctttattatggctgaataatatttcattgtgtatgtatactctattttctttatccacttgttcgttgatggacacgtaggttgatgccacatctttgctattgtgaatagtgctgcaacaagcacaggggtgcaggtatccctttcttacactgatttcctttcctttggataaattacccaccaatgaaattgctatattgtatcgtagttttacttttag--tttttttgagaaatctctatactattttagatactgactgtactaatttacaatcccaccaacagcatccttgccagtatctattttttggcttcctgttagtagccaatctcactgaggcaagacaatctctcattgcagctttgatttgcatttccctggtgaacagtgattttgagcattttttcatgtacctgtttgtcatttttatgtcttttttaaagaaatgtctgttttgatcctttgcctatttttagtgggattatttgttgttgttttgctgttgtgt----tgagtttcttgtatattttgg--atcagacctttgtcagatgaatagtttgtatatattttcttccattcaagaggctatgtcttcactctgttgattgtttcctttgctgtgcagaagttttttagtatttacata--gttccgtttgtctatttgttgtttcctgtacttttaaggtcttagccataaaatccttgcctaaatcaatgtccttaagtgtttct-----------tctgtgt-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatatggtgagagacaggggtccagtttcattcttctgcataaggacatccagtttttccagcaccatttgttggacagaatgtcctttccccagtgtatattcttgatgcc-tttttcaaaagtcagttggctgcaaattgatggatttagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgctgtagccttataccatattttgaagccaggtagtgtgatgcttccagctttgttctttttgctcagaattgctttggctatctaggctcctttttgattccaaacaaattttaagact-ttttttctattactgtgaaaaatgtcattCCAGTCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186381007 1650 + 189454096 TTTAAAAattgattgctaatatttgtacacatttacatgggacatgtgatattttgatacatgcatagaatttgtaatgatcagggtatttaggataaccatctccctgagcatttatcatttctttgtgttgaggatatttcgtatcttctcttctagctattttgaaatatacaataaattattgttaacgctagtcaccctactatgttattggatgataaaatgtatttcttctctctaactgtatgtttgtaccccttaaccagcctcccttcatccctcctgccactccctttcccagcttct----ggtgtcattctactctccatctccatgagatcgtcttgttttgctcccacatatcagtaaaaacatgtggtatttgtgtttctgtgcttggcctatttctctgaac-ataatgacctccagtaccacccatgtcgctgaaaatgacaggatttcattctttattatggctgaataatatttcattgtgtatgtatactctattttctttatccacttgttcgttgatggacacgtaggttgatgccacatctttgctattgtgaatagtgctgcaacaagcacaggggtgcaggtatccctttcttacactgatttcctttcctttggataaattacccaccaatgaaattgctatattgtatcgtagttttacttttag--tttttttgagaaatctctatactattttagatactgactgtactaatttacaatcccaccaacagcatccttgccagtatctattttttggcttcctgttagtagccaatctcactgaggcaagacaatctctcattgcagctttgatttgcatttccctggtgaacagtgattttgagcattttttcatgtacctgtttgtcatttttatgtcttttttaaagaaatgtctgttttgatcctttgcctatttttagtgggattatttgttgttgttttgctgttgcgt----tgagtttcttgtatattttgg--atcagacctttgtcagatgaatagtttgtatatattttcttccattcaagaggctatgtcttcactctgttgattgtttcctttgctgtgcagaagttttttagtatttacata--gttccgtttgtctatttgttgtttcctgtacttttaaggtcttagccataaaatccttgcctaaatcaatgtccttaagtgtttct-----------tctgtgt-----tttcttctagtagtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatatggtgagagacaggggtccagtttcattcttctgcataaggacatccagtttttccagcaccatttgttggacagaatgtcctttccccagtgtatattcttgatgcc-tttttcaaaagtcagttggctgcaaattgatggatttagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgctgtagccttatagcatattttgaagccaggtagtgtgatgcttccagctttgttctttttgctcagaattgctttggctatctaggctcctttttgattccaaacaaattttaagact-ttttttctattactgtgaaaaatgtcattCCAGTCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175995828 1638 + 178775436 TTTAGAAATTGATTGCTAATATTTGTACACATTTACATGGgacatgtgatatttttatacatgCATAGAATTTGTAATgatcagggtatttaggataaCCATCTCCctgagcatttatcatttctttgtgttgaggaTATTTCgtatcttctcttctagctattttgaaatatacaataaattattgttaacgcTAGTCACCCTACTATGTTATTGgatgataaaatgtatttcttctctctaactgtatgtttgtacccctTAACCAGCCTCCCTTCATCCCTCCTGCCACTctctttcccagcttct----ggtgtcATTCTACTCTCCATCTCCATGAGATCGTCTTGTTTTGCTCCCACATATCAGtaaaaacatgtggtatttgtgtttctgtgcttgGCCTATTTCTCtgaat-ataatgacctccagtgcCACACATGTCgctgaaaatgacaggatttcattctttattatggctgaataatatttcattgtgtatgtatactctattttctttatccacttgttcgTTGATGGACACGTAGGTTGAtgccacatctttgctattgtgaatagtgctgcaataagcacaGGGGTGCAGGTATCCCCTTCtttcactgatttcctttcctttggatgaaTTACCCACCAATGAAATTGCTATATTGTATcgtagttttacttttag--tttttttgagaaatctctatactaTTTTAGACactgactgtactaatttacaatcccaccaacagcatCCTTGCCAGTATCTATTTTTTGGCTTCCTGTTAGTAGCCAATCTCACTGAGGCAAGACGATCTCTCATTgcagctttgatttgcatttccctggtgaacagtgattttgagcatcttcTCATGTACCTGTTTGTcgtttgtatgtcttttttaaagaaatgtctgttttgatcctttgcctatttttagtgggattatttgttgttgttttgctgttgcgt----tgagtttcttgtatattttggatatcagacctttgtcagatgaatagtttgtatatattttcttccattcaggAGGCTGTGTCTTCActc--ttgattgttttctttgctgtgcagaagctttttagtatTTACATA--GTTCCGTTTGTCTATTTGTTGTTTCCTGTACTTCtaaggtcttagccataaaatctt------------tgtccTTGAGtgtttct-----------cctgtgt-----tttcttctagtagtttcatccTGTTGGgtcttatatttaggtttttagttcattttgagttgatttttgcatatggtgagagacaggggtccagtttcattcttgtgCATAGGGacatccagtttttccagcaccatttgttggacagaatatcctttccccagtgtatattcttgATGCC-TTTTTCAAAAGTCAGTTGGCTGCAAATTGATGGATTTagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgctGTAGCCTTATAGCATATTTTGAagccaggtagtgtgatgcttccagctttgttctttttgctcagaattgctttggctgtCTGGGCTCCTTTTTGATTCCAAAcaaattttaagact-ttttttctattactgtgaaaaatgtcattccAGTCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132838979 1650 + 135778131 TTTAAAAattgattgctaatatttatacacatttacatgggacatgtgatatttttatacatgcatagaatttgtaatgatcagggtatttaggataaccatctccctgagcatttatcatttctttgtgttgaggatatttcatatcttctcttctagctattttgaaatatacaataaattattgttaatgatagtcaccctactgtgttattggatgataaaatgtatttcttctctctaactgtatgtttgtaccccttaaccagcctcccttcatccctcctgccactccctttcccagcttct----ggtgtcattctgctctccatctccatgagatcgtcttgttttgctcccacatatcagtaaaaacatggggtatttgtatttctgtgcttggcctatttctctgaac-ataatgacctccagtgccacccatgtcactgaaaatgacaggatttcattctttattatggctgaataatatttcattgcgtatgtatactccattttctttatccacttgttcgttgatggacacttaagttgattccacatctttgctattgtgaatagtgctgcaataagcacaggggtgcaggtatccccttcttacagtgatttcctttcctttggataaattacccaccagtgaaattgctatattgtatcgtagttttacttttag--tttttttgagaactctctatactattttagatactgactgtactaagttacaatcccaccaacagcatccttgccagtatctattttttggcttcctgttagtagccaatctcactgaggcaagacaatctctcattgcggctttgatttgcatttccctggtgaacagtgattttgagcattttttcacgtacctgtttgtcatttgtatgtcttttctaaagaaatatctgttttgctcctttgcctatttttagtgggatcatttgttgttgttttgctgttgcgt----tgagtttcttgtatattttgg--atcagacctttgtcagatgaatcgtttgtatctattttcttccattcaagaggctgcgtcttcactctgttgattgtttcctttgctgtgcagaagcttttcagtatttacata--gttccgttggtctatttgttgtttcctgtacttttaaggtcttagccataaaatctttgcctaaatcaatgtccttgagtgtttct-----------tctgtgt-----tttcttctagtcgtttcatcctgttgggtcttatatttaagtttttaattcattttgagttgatttttgcatagggtgagagacaggggtccagtttcattcttctgcataaggacatccagtttttccagcaccatttgttggacagaatgtcctttccccagtgtatattcttgatgcc-tttttcaaaagtcagttggctgcaaatagatggatttagttctgggttctctattctgttccactggtctatgtgtctttttataccaataccatgctgttttgtttgctgtagccttacagcatattttgaagccaggtagtgtgacgcttccagctttgttctttttgctcagaattgctttggctgtctgggctcctttttgattccaaacaaattttaagact-ttttttctgttactgtgaaaaatgttgttCCAGTCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188223065 1639 - 190850796 TTTAAAAattgattgatagtatttgtgcatgtttacatgggac--gtgatattt-gatagatgcgtagtatgtgcagtgatcgggg-attcagggtaaccttctccctgagcagttattatttctttgtggtgggaatatttcatatcttcccttccaactattttgaaacatacaatatattattgttaagtaccgtcaccctactgtgttagtggctgatagaatatatttcttctgtctgactgtatgtctgcaccccttaaccagcctctctttagtcttccttctactccctttcccagcttctggtaagtgtcattctactctccacctccatgatatcctccttttttgcttccacatgtaagtaagaacatgtgatatttgtctttctgggcctggcctatttctctgaac-ataatgagctccagttgcattcatgttgctgaaaatgacaggatttcattcttttgtatgggtgtgtaatattccattgtgtgtgtatattatattttctttatccatttgttcattgatggacacttaggttgatactaagtctttgctattgtgaatagtgctgtaataaatatgtgggcacaggtatccctttcttatactgatttcctttcctttcgataaattgcccactaatggaattgctatattgtattgtagttttacttttag--tttttttgagaaatctccatgctatgttacataatgactgtacaaatttacagcctcaccaacagc------------atctaatttttggcttcctg-tagttgccaatcttcctggggcaagacaatctctcattgtggctttgatttccattttcctgatga-cagtgatttcgagcattttttcgtatacctgtttgtcatttgtgtgtcttttttaaagatatgtctgtttagatcctttgcccattattactgggattatttgttg---ttttgctgttgagt----tgagtttcttgtata-tttagatattagaactttgtcagatgaatagtttgcatatattttcttttactcaagaggttgtatcttcactctgttgattgtttcttttgctgtgcagaagctttttagt-ttaatatagtgttctgtttgcctgttttttgtttcttgtacttttaaggtcttagctacaaaatctttgcctaaatcaatgtccttaattgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtttcctagtagttttatactgttgggtcttatatttaagtttttaattcattttgagttgatttcagcatatggtgagagataggggtatagtttcattcttctgcatatggacatccagttttcccagcaccatttgttggacaggatatcttttccccaatgtatattcttgatgcc-tttgttgaaagttagttggctgtaaatacatggatttagttctgggttctctgttttgttccaccggcctatgtgg-----------aataccatgctgttttgtttgctgtagattcatagcatattttgaagccaggtagtttgatgctttcagctttgtcc-ttttgatcaggattgctttggctatttgggctcctttttgattccaaacaaattttaagatt-ctttttctattactgtgaaaaatgtcattctagtctt i calJac3.chr3 C 0 C 0 e canFam3.chr16 15715834 0 - 59632846 C e mm10.chr8 84707219 323 - 129401213 I a score=1242025.000000 s hg38.chr4_KI270785v1_alt 31608 357 + 119912 TTTATATCCTCTCTCAGGCTACTTCATACATGCCTGGATTTGAATCTCGAAGCTTgtgg--ttcttaagttttttatgtcgaagaatcccctggattgtgtgttaaaatgcatacctcctggcactacctggagaggttctaa--atgtaggtttttggtgaggcccagcactgcattgttaagaagcacctcaggtttttttgatc--cagaca----ggctgatcacaatttgaaaaATAAGACCCAACATGTGAAATTCCCTG--AATACATGAGCCTTTGGTTTCTCATCA-TTCTGCAACTTACctgtcatttattgagcagccaactatgtgcaacatactgttctagggtatttacatacagt s panTro4.chr4 190304050 358 + 193495092 TTTATATCCTCTCTCAGGCTACTTCATACATGCCTGGATTTGAATCTCGAAGCTTgtgg--ttcttaagttttttatgtcgaagaatcacctggattgtgtattaaaatgcgtatctcctggcactacctggagaggttctaa--atgtaggtttttggtgaggcccagcactgcattgttaagaagcacctcaggtttttttgatc--cagaca----ggctgatcacaatttgaaaaATAAGACCCAACGTGTGAAATTCCCTG--AATACATGAGCCTTTGGTTTCTCATCATTTCTGCCACTTACctgtcatttattgagcagccaactatgtgcaacatattgttctagggtatttacatacaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270093 357 + 198332218 TTTATATCCTCTCTCAGGCTACTTCATAGAAGCCTGAATTTGAATCTCGAAGCTTgtgg--ttcttaagttttttatgtcgaagaatcacctggattgtgtattaaaatgcatatctcctggcactacctggagaggttctaa--ctctaggtttttggtgaggcccagaactgcattgttaagaagcaccccaggtttttttgatc--cagaca----ggctgatcacaatttgaaaaATAAGACCCAACATATGAAATTCCCCG--AACACATGAGCCTTTGGTTTCTCATCA-TTCTGCCACTTACctgccatttattgagcagccaactatgtgcaacatattgttctaggatatttacatacagt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111241680 357 + 115148730 TTTATATCCTCTCTCAGGCTACTTCATAGACGCCTGAATTTGAATCTTGAAGCTTgtgg--ttcttaagttttttatgtcgaagaatcacctgaactgtgtattaaaatgcatatgtcctggcactacctggagaggttctaa--ctgtaggtttttggtgaggcccagaactgcattgttaagaagcaccccaggtttttttgatc--cagaca----ggctgatcacaatttgaaaaacaAGACCCAACATATGAAATTCCCTG--AACACATGAGCCTTGGGTTTCTCATCA-TTCTGCCACTTACCTGTcgtttattgaggagccaactatgtgcaacatattgttctaggatatttacatacagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181045253 359 + 184069350 CTTATATCCTCTCTTAGGCTACTTCGTAGATGCCTGAATTTGAATCTCAAAGCTTGTGG--TTTTTAAGTTTTTTATGTCGAagaatcacctggattgtgtattaaaatgcgtatttcctggcactacctagagcggttctaa--ctctaggtttttggtgaggcccagaactacattgttaagaagcaccccaggtgtttttgatC--CAGACA----GGCTGATCAGAACTTGAAAAATAAGAACCAACATATGAAATTCCCTATATACACATGAGCCTTTGGTTTCTCATTA-TTCTGCCACTTACctgtcattgattgtgcagccaactatgtgcaacatattgttctaggatttttacatacagt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186382657 359 + 189454096 CTTATATCCTCTCTTAGGCTACTTCGTAGATGCCTGAATTTGAATCTCAAAGCTTGTGG--TTTTTAAGTTTTTTATGTCGAagaatcacctggattgtgtattaaaatgcgtatttcctggcactacctagagcggttctaa--ctctaggtttttggtgaggcccagaactacattgttaagaagcaccccaggtgtttttgatC--CAGACA----GGCTGATCAGAACTTGAAAAATAAGAACCAACATATGAAATTCCCTATATACACATGAGCCTTTGGTTTCTCATTA-TTCTGCCACTTACctgtcattgattgtgcagccaactatgtgcaacatattgttctaggatttttacatacagt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175997466 359 + 178775436 CTTATATCCTCTCTTAGGCTACTTCGTAGATGCCTGAATTTGAATCTCAAAGCTTgtgg--tttttaagttttttatgtCAAAGAATCACCTGGATTGTGTATTAAAATGCGTATTTCCTGGCACTACCTAGAGCGGTTCTAA--CTCTAGGTTTTTGGTGAGACCCAGAACTACATTGTTAAGAAGCATCCCAGGTGTTTTTGATC--CAGACA----GGCTGATCAGAACTTGAAAAATAAGAACCAACATATGAAATTCCCTGTATACACATGAGCCTTTGGCTTCTCATTA-TTCTGCCACTTACCTGTCATTGATTGTGCAGCCAACTATGTGCAACATATTGTTCTAGGATTTTtacatacagt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132840629 359 + 135778131 CTTATATCCTCTCTTAGGCTACTTCGTAGATGCCTGAATTTGAATCTCAAAGCTTGTGG--TTTTTAAGTTTTTTATGTCGAagaatcacctggattgtgtattaaaatgcatatttcctggcactacctagagcagttctaa--ctctaggtttttggtgaggcccagaactgcattgttaagaagtaccccaggtgtttttgatC--CAGACA----GGCTGATCAGAACTTGAAAAACAAGAACCAACATATGAAATTCCCTGTATACACATGAGCCTTTGGTTTCTCATTA-TTCTGTCACTTACCTGTCGTGGattgtgcagccaactatgtgcaacatattgttctaggatttttacatacaat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188224704 356 - 190850796 tttatGTCCTTTCTCAGGCTACTTCATAGATGCCTGAATTTGAATCTCTAAGCTTGTGGTTTTTTTAAGTTTTATATGTCAAagaatcacctg-attgtgtattaaaatgcatatttcctgtcactat----agaggttttaa--ctctaggttttgggtgaggcccagaactgcagtgttaagaagcatcccaggtgtttttgatC--CAGATA----GATTGCTCACAACTTGAAAACTAAGACCCAAGGTATGAAATTCCCTGTATACACATGAGCCTTTGGTTTCTCATCA-TGCTGCCACGTACCTGTcatttactgagtagccaactatgtgtaacatattgttgtgggatacttacatagaat i calJac3.chr3 C 0 C 0 s mm10.chr8 84707542 339 - 129401213 TTTCTATCTTCTCTCAGGCTGCTTTATAAGACGCTCCATGTGCATTTCTAAGCCTGTGG--TTTCTG-----TTCCCATTGAAGGACCACA-GGAACGTGGgctaagatgcagattccctggagctgccttcagcaattctaa--ctctgggtttatggtaaggcccagaagtacatggttaaaacaattttcaggtacttttggtc--caggtacTCGGACTGATCAGG--TAGAAAGTCCAGGGT-----TGTGAAGTGCGCTGTATCCATCTGAGCCtttgtttgatcatca------------agcttttacttatcaaataaccaactgtgtgggaggcattaatctaggatctgtacatacagt i mm10.chr8 I 323 I 37 s canFam3.chr16 15715834 361 - 59632846 TTTACATCCTCTCTCCTGCTACTGCTTAGACAAGGGAATTTGAATCTCTCGGCTTGTGG--ATTTTAACTTTTTAATGATGAagaatcacccaggaaatttgttaaaatgcaggttccctagtcccacccagggaggttctgattctgtgggtttgcagagaagcccacaatcacatcattaa-aagcatcccaggggttttggcctggtaatca----gacggaccacagtttgaaaaacaGGACCCTGTGTATGAAATGCACGGCACCCACCTACACCTTCGCTAGGTCACGA-TGCTGCTGGTTGgctacagtttattgagtagccaactacggtcaaggccttatgctaggat-cctacacacatt i canFam3.chr16 C 0 C 0 a score=462531.000000 s hg38.chr4_KI270785v1_alt 31965 160 + 119912 a--tttttttgtcttcataatagtctgata-ttataatgattagtgtcctggttttacattgaggaaactgaAActgg-aatgt-cccagaaaactccttcactcacatgtctggcctg----gcctgagatggcc-gaaaatctgagGGCTGACTAGCATTGCTCATTC s panTro4.chr4 190304408 160 + 193495092 a--tttttttgtcttcataatagtctgata-ttataatgattagtgttctggttttacattgaggaaactgaAActgg-aatgt-cccagaaaactccttcactcacatgtctggcctg----gcctgagatggcc-gaaaatctgagGGCTGACTAGCATTGCTCATTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270450 165 + 198332218 a-ttttttttgtcttcataatagtctgata-ttatagtgattagtgtcctggttttacattgaggaaactgaaactGG-AATGT-CCCAGAAAACTCCTTCACTCACATGTCTGGTCTGGCCTGCCTGATATGGCC-GAAAATCTGCGGGCTGACTAGCATTGCTCATTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242037 165 + 115148730 atttttttttatcttcataatagtctgatatttataatgattagcgtcctgattttacattga-gaaactgaAAATGGAAATGTCCCCAGAAATCTCCTTCACTCACATGTCTGGCCTG----GCATGAGATGGCCAAAAAATCTGAGGGCTGACTGGCATTGCCCATTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181045612 158 + 184069350 a-tttattttgtcttcataatagtcttgta-ttataatgattagtgtcctggttttacatcgaggaaactgaaactGG-AATGT-CCCAG-AAACTCCTTCACTCACA--TCTGGCCTG----ACCTGAGATGGCC-GAAAATCTGAGGGCTGGCTAGCATTGCTCATTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186383016 158 + 189454096 a-tttattttgtcttcataatagtcttgta-ttataatgattagtgtcctggttttacatcgaggaaactgaaactGG-AATGT-CCCAG-AAACTCCTTCACTCACA--TCTGGCCTG----ACCTGAGATGGCC-GAAAATCTGAGGGCTGGCTAGCATTGCTCATTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175997825 159 + 178775436 atttttttttgtcttcataaTAGTCTTATA-TTATAATGATTAGTGTCCTGGTTTTACATcgaggaaactgaaactgg-aatGT-CCCAG-AAACTCCTTCACTCACA--TCTGGCCTG----ACCTGAGATGGCC-GAAAATCTGAGGGCTGGCTAGCATTGCTCATTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132840988 160 + 135778131 atatttttttgtcttcataatagtcttata-ttataatgattagtgtcctggttttacatcgaggaaactgaaactGG-AATGT-CCCAGAAAACTCCTTCACTCACA--TCTGGCCTG----ACCTGAGGTGGCC-AAAAATCTGAGGGCTGGCTAGCATTGCTCATTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188225060 162 - 190850796 atattattttgtcttcataacagccctata-ttataatgattagtgtcctggttttacatagaggaaactgTAATTTG-AATGT-CCCAGAAAACTCTTTCACTCACGTGCCTGGCCTG----GCCTGAGATGGCT-GAAAATCTGAGGACTGAGTAGCGTTGCTAATTC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15716195 140 - 59632846 atgctatcttacctcaataataatcctatg-ctacggtaatcagtgtcttggctttatgctgaggggactg-aACTGG-AATAT-TCCACATAGTTCCTTCACTCACACCTCAGGTC------CCTGGGCATGTTC------TCT--------------ATTGTTCACTC i canFam3.chr16 C 0 C 0 e mm10.chr8 84707881 37 - 129401213 I a score=5001.000000 s hg38.chr4_KI270785v1_alt 32125 3 + 119912 TTT s panTro4.chr4 190304568 3 + 193495092 TTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270615 3 + 198332218 TTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242202 3 + 115148730 TTT i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132841148 3 + 135778131 TTT i chlSab2.chr7 C 0 I 15 s calJac3.chr3 188225222 3 - 190850796 TTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15716335 3 - 59632846 CTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84707881 37 - 129401213 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=121692.000000 s hg38.chr4_KI270785v1_alt 32128 156 + 119912 ATTTTCTGTTAATCAG-----------TTTATATACA----------------------------------------------------------------------------------------------ACCCCTAAGCAAGATAAtattatg---------------------------tgttctgaagttcatttatttgcactgctatataatattc-attgATTTAACTTAATACCTCTTGAAGAGTAACCAAGGACCAAGAACAGTATATG-------------------------------------------------------------------------------------------CCAAGTCAGAG s panTro4.chr4 190304571 156 + 193495092 ATTTTCTGTTAATCAG-----------TTTATATACA----------------------------------------------------------------------------------------------ACCCCTAAGCAAGATAACAttacg---------------------------tgttctgaagttcatttatttgcactgctatataatattc-attgATTTAACATAATACCTCTTGAAGAGTAACCAAGGACCAAGAACAGTATATG-------------------------------------------------------------------------------------------CCAAGTCAGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270618 156 + 198332218 ATTTTGTGTTAATCAG-----------TTTATATACA----------------------------------------------------------------------------------------------ATCCCTAAGCAAGATAATATTATG---------------------------TGTTCTGAAGTTCATTTATTTGCAGTGCTATATAATATTC-ATTGATTTAACATAATACCTCTTGAAGAGTAACCAAGGACCAAAAACAGTAGATG-------------------------------------------------------------------------------------------CCAAGTCAGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242205 157 + 115148730 ATTTTGTGTTAATCAGT----------TTTATATACA----------------------------------------------------------------------------------------------ATCCCTAAGCAAGATAATATTATG---------------------------TGTTCTGAAGTTCATTTATTTGCAGTGCTATATAATATTC-ATTGATTTAACATAATGCCTCTTGAAGAGTAACCAAGGACCAAGAACAGTATATG-------------------------------------------------------------------------------------------CCAAGTCAGAG i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188225225 155 - 190850796 ATTCTGTGTTGATCAT-----------TT--GGTACA----------------------------------------------------------------------------------------------GTCCCTAAACAAGATAATACCATG---------------------------TGCTCCGAAGTTCATTTATTTGCAGTGTTATGTAATATTCAATTAATTTAACGTAATACCCCTTGAAGAGTAACCAAGGACCAGGAACAATATTCA-------------------------------------------------------------------------------------------CCAAGTGTGAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15716338 380 - 59632846 ATTTTGTGTCAGTCATTCCtatatatatttatatatatatatacacacacacatatatatacacacacatgcatgatatccatatgccttgtacacatacacacatgtatatatatacatgatatgtatatatTCCTAAACAATAcagtattacgtttgtaaggtagattcctatttgtatatgttctacagttcattcatttacactgccatacaatgctcaattggatgaacataATATATGTTGAAGAATAACCAAGGACTAAGAAGAGTATGTGTTGAGGGTGAatttatttatttatttatttatttTTAAaagattttattttattcattcatgagagacacagagagagagagaggcagagacaaaggcagag i canFam3.chr16 C 0 I 124 e mm10.chr8 84707881 37 - 129401213 I e chlSab2.chr7 132841151 15 + 135778131 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=220108.000000 s hg38.chr4_KI270785v1_alt 32284 213 + 119912 TTTAATTTTTAGAGCAGCAATACCCTGGA-GTAAGTTCAGTGAGTCTCTCTGAAAGCTCCTTCCAAATA-CGGTGAGATTGTAAAAGGCACTTTTGGATTGACTGTGATAAGGAATTGAGAAGTCGCTCTTGGCAAGGATCATCATTGCAGCCTAATGTCTTCTGCGTGGGCATTAAAGCTGGCCCAGTTCTCTACAAGGTGTAGGATGAGTGGT s panTro4.chr4 190304727 213 + 193495092 TTTGATTTTTAGAGCAGCAATACCCTGGA-GTAAGTTCAGTGAGTCTCTCTGAAAGCTCCTTCCAAATA-CGGTGAGATTGTAAAAGGCACTTTTGGATTGACTGTGATAAGGAATTGAGAAGTCGCTCTTGGCAAGGATCATCATTGCAGCCTAATGTCTTCTGCATGGGCATGAAAGCTGGCCCAGTTCTCTACAAGGTGTAGGATGAGTGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270774 213 + 198332218 TTTAATTTTTAGAGCAGCAATACCCTGGA-GTAAGTTCAGTGAGTCTCTCTGAAAGCTCCTTCCAAATA-CGGTGAGATTGTAAAAGGCACTTTTGGATTGACTGTGATAAGGAATTGAGAAATTGCTCTTGGCAAGGGTCATCATTGCAGCCTAATGTCTTTTGGGTGGGCATTAAAGCTGGCCCAGTTCTCTACAAGGTGTAGGATGAGTGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242362 213 + 115148730 TTTAATTTTTGGAGCAGCAATACCCTGGA-GTAAGTTCAGTGAGTCTCTCTGAAAGCTCCTTCCAAATA-CGGTGAGACTGTAAAAGGCACTTTTGGATAGGCTGTAATAAGGAACTGAGAAGTCACTCTTGGCAAGGGTCACCGTTGCAGCCTAATGTCTTTTGGGTGGACGTTAAAGCTGGCCCAGTTCTCTACAAGGTGTAGGACGAGTGGT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188225380 212 - 190850796 TTTAATTTTTAGAGCAGCACTGCCCTGGA-GTAAAATCAGTGAGTCTCTCTGAAAGCTCCTTCCAAATATCAGTGAGATTGTGAAAGGCGCTTTTGGATTGACTGAGAGAAGGAACTGAGCAGCCACTC-TGGCGAGGGTCATCACTACAGCCT-GTGTCTCTTCGGTGGGCATTAAAGCTGGCCCAGTTCACTACAAGCTCTAGGATGAGTGCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15716842 211 - 59632846 TTTAATTTTTAGAGCAGCAATATTCTCAATGTGAGCTCCGTGAGTCTTTCTGAAAGCTCCTTTCAAATA-AGGTAGGATTCTCAGAGGCACTTTTTGGTTGAATATGGAAGGGAATTGAGAAGCCTTACTTGGCATGGGTCA---TTGTGGCCTGATGGCTTTGAGGCAAGTACTCAGTCTGGTCCCGTTCTCTGTAAGGTCTAGGATGAGTCAT i canFam3.chr16 I 124 C 0 e mm10.chr8 84707881 37 - 129401213 I e chlSab2.chr7 132841151 15 + 135778131 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=380975.000000 s hg38.chr4_KI270785v1_alt 32497 366 + 119912 -AGAGGCTCAAGCAGGCTCAGAGTTAGGCAACAGTCAAATCTGTTTGCCCATGAACATAGCTGGGCAAAGGTTCTTTTTAACACATGATCAAAttatccattccctttgccaatggacatctgtgttgtttcca----------tttttttttttgctattaaaaataatgcagctataaacactttggacatgtctccttggagcacttggggatctctctcaagaaaatattcccaggagtggaatatttggg--ccaccgtgtacgtgggtcatcaagtttcttagataatgctaaattgtttctaaaaagacttgtgtgagtccacactcccaccagcagtatgtaagtaagacctgttgctGT---CCAGTCCCACA s panTro4.chr4 190304940 370 + 193495092 -AGAGGCTCAGGCAGGCTCAGAGTTAGGCAACAGTCAAATCTGTTTGCCCATGAACATAGCT-GGCAAAGGTTCTTTTTAACACATGATCAAAttatccattccctttgccaatggacatttgtgtcgtttcca-----ttttttttttttttttgctattaaaaataatgcagctataaacactttggacatgtctccttggagcacttggggatctctctcaagaaaacattcccaggagtggaatatttggg--ccactgtgtacgtgggtcatcaagtttcttagataatgctaaattgtttctaaaaagacttgtgtgagtccacactcccaccagcagtatgtaagtaagacctgttgctGT---CCAGTCCCACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195270987 366 + 198332218 -AGAGGCTCAAGCAGGCTGAGAGTCAGACAACAGTCAAATCTGTTTGCCCATGAACATAGCTGGGCAAAGGTTCTTTTTAACACATGATCAAAttatccattccctttgccaatgggcatttgtgttgtttcca------tttttttttttttttgctattaaaaataatgcagctataaacactttggacatgtctccttggagcacttggggatctctctcaagaaaatattcccaggagtggaatattgggg--ccgcagtgtacgtgggtcatcaagtttcttagataatgctaaattgtttccaaaaagacttgtatgagtccacactcccaccagcagtat----gtaagacttgttgctGT---CCAGTCCCACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242575 358 + 115148730 -AGAGGCTCAGGCAGGCTCAGAGTCAGGCAACAGTCAAATCTGTTTGCCCATGAACATAGCTGGGCAAAGGTTCTTTTTAACACGCAATCAAAGtatccattccc-ttgccagtggacatttgtgttgtttcca-------------tttttctcgctattaaaaataatacagctataaacattttggacatgtctccttggagcacttgggaatctgtctcaagaaaatattcccaggagtggaatatctggg--ccacagtgtacgtgggtcatcaagtttcttagataatgctaaattgtctccaaaaagacttgtgtgagtccacactcccaccagcagtgt----gtaagacctgttgctGT---CCAGTCCCACA i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188225592 356 - 190850796 -AGAGTCTCAAGCAGGCT--GTGTCAGGCCACACTCAGATCTGTTTTCCCGTGAGCATAGCTGGGCAGGGATACTTTTTAATGcacaaccaaattat-cattccc-tttccaatggagattcgtgttatttccc----------------ttttttctatcaaaaataatgcagctgtgaacattttggacatgtctccttggtgcacttggggacctctctcaaaaaagtgttcccaggagcggaatatttggg--ctgcagtgtacgtgggtcatcaaatttcttagataacgctaaatagtttcccaaaagagctgtgtgagtccacactcccgccagcaatgtggaagtgagacctgtcgctgc---ccagccccTCA i calJac3.chr3 C 0 I 255 s mm10.chr8 84707918 340 - 129401213 -aAAGGCTGATGAAGATGCAGAG--------CAGTTAAGTTCATTTATATACCTTCAGAGCCAGGCAGAGGTGACTTTAAAGGCA----CACATTACCCAGCCCT---------TAACAGTCATGTTCTTTCTATAGTATTTATTTTATTCTAtttgttttaaaatcaatgttactatgaacattttatacctgt---------acatgtgggaagctttctcatggaacaatattagagagt------tttgagtcctccagtgtagat-gattatcaagcttattagacactgctaaattgtttcttaagcaatttggattaatctcgatgctcaccaacagaat----atacaacctgctactatgacatactcCTGCA i mm10.chr8 I 37 I 2 s canFam3.chr16 15717053 357 - 59632846 AGGAGATTCCTGTAGGCTTAGGGTCAGGCAGCAGTCAAGTATGTTAGCGCATGCGCAAGATTGGGCAGAGATTTCTTCTAA--CGTGATTAAAttatccattctc-ttgtcagtggatgtttgtcttcttgggt-----------ttgtttgtgttccattaacaataatgccgctgcgaacatttcggacatgtgtcc-tggtgcacaaggggaatttttccaaggaaatataccctggagtggaagatttggg--tcacagtgtatgggcatcttcaactttattagataatgctaaattgttttgcaaagaatttgtgctagtttacactcccg-cagcagtgt----ataatacctgctgctgc---acattctccca i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132841151 15 + 135778131 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=-624.000000 s hg38.chr4_KI270785v1_alt 32863 4 + 119912 --ACAG s panTro4.chr4 190305310 4 + 193495092 --ACAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195271353 4 + 198332218 --ACAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242933 4 + 115148730 --ACAG i nomLeu3.chr7b C 0 C 0 s mm10.chr8 84708260 2 - 129401213 --AT-- i mm10.chr8 I 2 C 0 s canFam3.chr16 15717410 4 - 59632846 acac-- i canFam3.chr16 C 0 C 0 e calJac3.chr3 188225948 255 - 190850796 I e chlSab2.chr7 132841151 15 + 135778131 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=169514.000000 s hg38.chr4_KI270785v1_alt 32867 143 + 119912 GGTGCTCTTTCTGG-TGGCAGTGAATGAATGGATCCCTTGTGAGTCAATTTGGGATGTGATAGGAGAGTT-AAATAAATGCAACATTATAGAATCTGTACAGAATCAGCATCAGGGATCTTCAGGAAGGAACTTGGCT---TATCCAT s panTro4.chr4 190305314 143 + 193495092 GGTGCTCTTTCTGG-TGGCAGTGAATGAATGGATCCCTTGTGAGTCAATTTGGGATGTGATAGGAGAGTT-AAATAAATGCAACATTATAGAATCTGTACAGAATCAGCATCAGGGATCTTCAGGGAGGAACTTGGCT---TATCCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195271357 143 + 198332218 GGTGCTCTTTCTGG-TGGCAGTGAATGAATGGATCCCTTGTGAGTCAATTTGGGATGTGATAGGAGAGTT-AAATAAATGCAACATTATAGAATCTGTACAGAATCAGCCTCAGGGATCTTCAGGAAGGAACTTGGCT---TATCCAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111242937 143 + 115148730 GGTGCTCCTTCTGG-TTGCAGTGAATGAATGGATCCCTTGCGAGTCAATTTGGGATGTGATAGGAGAGTT-AAATAAATGCAACATTATAGAATCTGTACAGAATCAGCATCAGGGATCTTCAGGAAGGAACTTGGCT---TATCCAT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188226203 146 - 190850796 GGTGCTCCTTCTGGCTTGCAGTGAATGAATGGATCCCTTTTGAGTCAATTTGGGAAGTGATAGGGGAATT-GAATAAATGCAACATTATAGAATCTATACAGAATCAGCATCAGGGATCTTCCGGAAGGAACTTGGTTTAATACCCA- i calJac3.chr3 I 255 C 0 s mm10.chr8 84708262 109 - 129401213 ------TTTGCT---TGGCAGTGAAAGAATGAATCCCTTGTGATATAA-----------AGGGAATGGCT-AAATAGGCAGAATGCTAGGGAATTTA--------------CAGAGATCTTCAGAGAGTGACTGGG-T---CACCTAT i mm10.chr8 C 0 C 0 s canFam3.chr16 15717414 143 - 59632846 tttgtTCCCTCTGGCTTGTGATGAATGCATAAATCCCTTGCGAGTCAATTTGGGAAGCGATAGGAGAGTTGAAATAAATGCAACATTAGGAAACCTACCCAGAATTAGCATTAGAGATCTTCAGGAAAGAGCTTGGTT---CATCT-- i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132841151 15 + 135778131 I e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=6667.000000 s hg38.chr4_KI270785v1_alt 33010 5 + 119912 CATTT s panTro4.chr4 190305457 5 + 193495092 CATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195271500 5 + 198332218 CATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111243080 5 + 115148730 CATTT i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132841166 5 + 135778131 CATTT i chlSab2.chr7 I 15 C 0 s calJac3.chr3 188226349 4 - 190850796 -AGTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84708371 5 - 129401213 CCCTT i mm10.chr8 C 0 C 0 s canFam3.chr16 15717557 5 - 59632846 TCTTT i canFam3.chr16 C 0 C 0 e papAnu2.chr5 175997984 0 + 178775436 C e macFas5.chr5 186383174 0 + 189454096 C e rheMac3.chr5 181045770 0 + 184069350 C a score=2757557.000000 s hg38.chr4_KI270785v1_alt 33015 792 + 119912 TTTGGTACCAAAATACCTCATAGAATGCT-GCA----CCCCG--------TACATTCATATTTACTGAGTTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTGTTTTTAAAAATCCTCAAAAGGCTTGCATGCATTCTGTCTTCTCTGAAATACGCATAATTCCAGTCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATATAAATAATGAAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAATG-AGAGAAG----ACA-AACACA-----AAAATCTTTGACTGTCTTCAAGTACAGTAAAATTTCAGCTGTGTCATCACTGGGGGTTTTCCTGGATGCGGAACAGCTGTGACTGCTTCGTGTAGCAGGTGCTGGA-CTTCA-CCGGTCTCTATAGTGGTAGCAAATTTGGGTCACCGGGAAAGGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCCATCTGAAAAAATGATACAGTG-TTGTT-------------------------------------------------------AGGATCACAGAAGGATATGGAGAACACCCAAAGTCCAAGGGGCATT-GGCCAATAA--GAAGACAAATGtgggatttgtcctctttgccact--aaattaccagaaagaatgctgctcacgttgatcatgactcagagtcagcgcctcggtgcccgggaggagtctgtgaacttgtgtggtgattcggctctggccctgagggacaaatgtccgcttttgaaaaccaccagc-cactcagcaGCCCTCACGACG--GAACCAATCAGCCACTG s panTro4.chr4 190305462 792 + 193495092 TTTGGTACCAAAATACCTCATAGAATGCT-GCA----CCCCG--------TACATTCATATTTACTGGGTTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTGTTTCTGAAAATCCTTAAAAGGCTTGCATGCATTCTGTCTTCTCTGAAATAGGCGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATATAAATAATGGAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAATG-AGAGAAG----ACA-AACACA-----AAAATCTTTGACTGTCTTCAAGTACAGTAAAATTTCAGCTATGTAATCACTGGGGGTTTTCCTGGATGCGGAACAGCTGTGACTGCTTCGTTTAGCAGGTGCTGGA-CTTCA-CCGGTCTCTATAGTGGTAGCAAATTTAGGTCACCGGGAAAGGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCCATCTGAAAAAATGATACAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACACCCAAAGTCCAAGGGGCATT-GGCCAATAA--GAAGACAAATGtgggatttgtcctctttgccact--aaattaccagaaagaatgctgctcacgttgatcatgactcagagtcagcgcctcggtgcccgggaggagtctgtgaacttgtgtggtgattcggctctggccctgagagacaaatgtccgcttttgaaaaccaccagc-cactcagcaGCCCTCACGACG--GAACCAATCAGCCACTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195271505 793 + 198332218 TTTGGTACCAAAATGCCTCATAGAATGCT-GCA----CCCAG--------TACATTCATATTTACTGGGTTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTATTTTTAAAAATCCTTAAAAGGCTTGCATGCATTCTGTCTTCTCTGAAATAGGCGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATACAATGTTCCTATAGATAATGAAGTTGGCATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAATG-AGAGAAG----ACA-AACACA-----AAAATCTTTGACCATCTTCAAGTACAGTAAAATTTCAGCTATGTAATCATTGGGGGTTTTCCTGGATGAGGAACAGCTGTGACTACCTGGTTTAGCAGGTGCTGGA-CTTCAGTCGGTCTCTATAGTGGTAGCAAATTTAGGTCACCGGGAAAGGCAGTTCTTGTTGTTCCTGTCACTTTTTAGCCATCTGAAAAAATGATACAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACCCCCAAAGTCCAAGGGGCATT-GGCCAATAA--AAAGACAAATGtgggatttgtcctctttgccact--aaattaccagaaagaatgctgctcacattgatcatgactgagagtcagtgcctcggtgcctggcaggagtctgtgaaattgtgcggtgatttggctctggccctgagggacaaatgtccacttttgaaaaccaccagc-cactcagcaGCCCTCAGGACG--AAACCAATCAGCCACTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111243085 795 + 115148730 TTTGGTACCAAAATGCCTCATAGAATGCT-GCA----CCCAG--------TACATTCATATTTACTGGGCTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTATTTTTAAAAATCCTTAAAAGGCTTGCATGCATTCTGTCTTCTCTGAAATAGGTGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATATAAATAATGAAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTCATG-AGAGAAG----ACA-AACACA-----AAAATCTTCGACTGTCTTCAAGTACAGTAAAATTTCAGCTATGTAATCATTGGGGGTTTTCCTGGATGCGGAACAGCTGTGACTGCCTCGTTCAGCAGGTGCTGGA-CTTCAGCCGGTCTCTATAGTGGCAGCAAATTTAGGTCACCGGGAAAAGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCCATCTGAAAAAATGATACAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACCCCCAAAGTCCAAGGGGCATT-GGCCAATAA--AAAGACAAATGTGGGATTTGTCCTCTTTGCCACT--GAATAACCAGAAAgaatgctgctcatattgatcacgactcagagtcagcacctcggtgcctggcaggagtctgtgaaattgtgtggtgactcagctctggccctgagggacaaatgtccacttttgaaaaccaccagc-cattcagcaGCCCTCACAACGCTGATTGGTTCAGCCACTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181045770 780 + 184069350 TTTGGTACCAAAATACTTCATAGAATGCG-GCA----CCCAG--------TAAATTCTTATTTACTGGGTTATGAAATTCTAGCCCATGAAATTTCCTTTCTACCTGGTTTGTGTGTTTTC-AAAATCCTTAAAAGGCTTGCATGCATCCTGTCTCCTCTGAAATAGGCGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATACAAATAATGAAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAGTG-AGAGAAG----ACA-AACACA-----AAAATCTTTGAGTGTGTTCAAGTA-----------CAGCTATATAGTCACTGGGGGTTTTCCTGGATGCGAAACAGCTGTGACTGCCTCATTTAGCAGGTGCTGGA-CTTCAGCCGGTATCTACAGTGGTAGCAAATTTAGGTCACTGGGAAAGGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCTGTCTG-AAAAATGATGCAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACCCCCAAAATCCAAGGGGCATT-GGCCAATAA--AAAGACAAATGTGAGATTTGTCCTCCTTGCCACT--AACTTGCCAGAAAgaatcctgctcacattgatcatcactcagagtcagtgcctcggtgcctggcaggagtctgtgaaattgtgtggtgattcggctgtgaccctgagagacaagtgtccacttttgaaaaccaccagt-cacTCAGCAGCCCTCATGACA--AAGCCAGTCAGCCACTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186383174 780 + 189454096 TTTGGTACCAAAATACTTCATAGAATGCG-GCA----CCCAG--------TAAATTCTTATTTACTGGGTTATGAAATTCTAGCCCATGAAATTTCCTTTCTACCTGGTTTGTGTGTTTTC-AAAATCCTTAAAAGGCTTGCATGCATCCTGTCTCCTCTGAAATAGGCGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATACAAATAATGAAGTTGGTATATCTAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAGTG-AGAGAAG----ACA-AACACA-----AAAATCTTTGAGTGTGTTCAAGTA-----------CAGCTATATAGTCACTGGGGGTTTTCCTGGATGCGAAACAGCTGTGACTGCCTCATTTAGCAGGTGCTGGA-CTTCAGCCGGTATCTACAGTGGTAGCAAATTTAGGTCACTGGGAAAGGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCTGTCTG-AAAAATGATGCAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACCCCCAAAATCCAAGGGGCATT-GGCCAATAA--AAAGACAAATGTGAGATTTGTCCTCCTTGCCACT--AACTTGCCAGAAAgaatcctgctcacattgatcatcactcagagtcagtgcctcggtgcccggcaggagtctgtgaaattgtgtggtgattcggctgtgaccctgagagacaagtgtccacttttgaaaaccaccagt-cacTCAGCAGCCCTCATGACA--AAGCCAGTCAGCCACTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175997984 758 + 178775436 TTTGGTACCAAAATACCTCATAGAATGCG-GCA----CCCAG--------TAAATTCTTATTTACTGGGTTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTGTTTTC-AAAATCCTTAAAAGGCTCGCATGCATCCTGTC---------------------CCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATACAAATAATGAAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAGTG-AGAGAAG----ACA-AACACA-----AAAATCTTTGAGTGTGTTCAAGTA-----------CAGCTATGTAGTCACTGGGGGTTTTCCTGGATGCGAAACAGCTGTGACTGCCTCATTTAGCAGGTGCTGGA-CTTCAGCCGGTATCTACAGTGGTAGCAAATTTAGGTCACTGGGAAAGGCAGTTCTTGCTGTTCCTGTCACTTTCTAGCTGTCTG-AAAAATGATACAGTG-TTGTT-------------------------------------------------------CGGATCATAGAAGGATATGGAGAACCCCC-AAATCCAAGGAGCATT-Ggccaataa--aaagacaaatgtgaGATTTGTCCTCTTTGCCACT--AACTTACCAGAAAGAATCCTGCTCACATTGATCATCACTCAGAGTCAGTGCCTTGGTGCCCAGCAGGAGTCTGTGAAATTGTGTGGTGATTCGGCTGTGACCCTGAGGGACAAGTGTCCACTTTTGAAAACCACCAGT-CACTCAGCAGCCCTCATGACG--AAGCCAGTCAGCCACTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132841171 779 + 135778131 TTTGGTACCAAAATACCTCATAGAATGCG-GCA----CCCAG--------TAAATTCATATTTACTGGGTTATGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTATTTTC-AAAATCCTTAAAAGGCTTGCATGCATGCTGTCTTCTCTGAAATAGGCGTAATTCCAATCTGTCATATAGGATTTTTGTGTGGGTTTATAATAATGGGTTTAATGGCTAAAAAGCATAATGCAATGTTCATACAAATAATGAAGTTGGTATATCAAAATAAAAGTGGAGAGATGCTCAAAGGCTGAGTTAGTG-AGAGAAG----ACA-AACACA-----AAAATGTTTGAGTGTGTTCAAGTA-----------CAGCTATGTAGTCATT-GGGGTTTTCCTGGATGCGAAACAGCTGTGACTGCCTCATTTAGCAGGTGCTGGA-CTTCAGCCGGTATCTACAGTGGTAGCAAATGTAGGTCACTGGGAAAGGCAGTTCTTGCTGTTCCTGCCACTTTCTAGCCGTCTG-AAAAATGATACAGTG-TTGTT-------------------------------------------------------AGGATCATAGAAGGATATGGAGAACCCCCAAAATCCAAGGGGCACT-GGCCAATAA--AAAGACAAATGTGAGATTTGTCctctttgccact--aacttaccagaaagaatcctgctcacattgatcatcgctcagagtcagtgcctcggtgcccggcaggagtctgtgaaattgtgtggtgattcggctgtgaccctaagggacaagcgtccacttttgaaaaccaccagt-cacTCAGCAGCCCTCATGACG--AAGCCAATCAGCCACTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188226353 835 - 190850796 TTGGGTATTAAAATACCTCATAGGATCCT-GC-----CCTAG--------TAAATTCATATTTACTGGGTCGTGAAATTCTAGCCCATGAAATTGCCTTTCTACCTGGTTTGTGTATTTTT-AAAATCCGTAAAAGGCTTGCATGCATTCTGTCTTCTCCGAAATAGGCGTAATTCCAATCTGTCATGTGGGATTTTTGTGTGGGTTTGTAATAATGGGTTTAGTGGCTAAAAAGCATAATGCACCGTTCATGTAAATAATGAGGTTGGTTCATCAAAATGAAGGAGGAGAGAAGCTCAAAGGC-GAGTTAATG-AGAGAA-------A-AACACA-----AAAATCTCTGACTGTCTTCAAGTACAGTGAAATTTCAGCTATGGAATCATTTGGGGTTTTCCTGGATGTGAAGCAGCTGTGACTGTCTCATTTAGCAGGTGC--GA-CTTCGGCCAGTCTCTGTAGTGGTAGCAAGTTTAGGTCACTGGGAAAGGCAGGTCTTGCTGTCCCTGTCCCTTTCTAGCCATCTG-AAAAATGATACAGTG-TTGTTCTGTGGGAAGGACAGGACAGCCCCCAACATCTAAGAATTAT---TGATCCTTCAAAGGATCGTAGAAGGATATGGAGAACTCCCAAAGTCCAAGGGGCATT-GGCCAATGA--AACGAC-ATTGTGGGAGTTAGCCTCCTTGCTACT--AAACTGCCAGGAAgattcctgctcatgttgatcatgactcagagttagtgcctcggtgcctggcagaagtctgtgaaattgtgtggtgatccagctctggccctgagggacaagtgtccacttttgaaaatgaccaGC-CACTCCACAGCCCTTGTGACA--TATCCAGTCAGTGACTG i calJac3.chr3 C 0 C 0 s mm10.chr8 84708376 680 - 129401213 -TACATTTCCGAACGCCTTGCAGAACGTA-GAAGTGTTTCAA--------TACAGTCACTCTTACCAAG----------------AATGA-------------------CTGTGT-------TAAGTC-----------------------ATCTGCCCCAAAACAGACACGATTTCGATCTATCCC-TAGGACTTTTGTGTGAGTTTCCAGTGTTGGCTTTA-TGTCTGAAGAGCATAATGTGACCCTCAT--AAATAATAAGG-------------------------------TCAGAAGTCGAGTTAGTGTAGAGAAGTTCTATA-TGCAAA-----AAAAAAAAAGACTGCTTTTAAATATAGTAAAATCTGAGCTGCGTCATTATTTAGGAGAGTCA-GGATGCAGAGCAGCTGTGGCTGTCTAACGTAGCAGGTGCAGGT-CCTCAGTCGGTCTCCATAGTGCAAGCAAATTTAGGTCACTGGG-AAGGCAGCTCTTGCTGTTCCTGTCAGGCTTTAAGCATCTG-AAAAATGATACTGTGTTTGTT-----------------------------CCCTGGGAAAGC---AAAGCCTTCAAGGGACCTTCAAAGGATGCAGAAAACTCACTAAGTTCAAGAAGCCTTCGGAGAGGAA--GATGTCAGAAGGGGTGTATGTGTCCTTTCCTGCTCCAACTTTC---AAAG--------------------------GGAGTTGGCATCTCAATGCTGGCTACTAGACGGTGACATTTTGTGGTGATT---------CCCTGC--------TGTTTCCTCCAGAAAGCCACCAACATACTGGGTAGACTTCATGACC--GAGCTAATCAGAGACTG i mm10.chr8 C 0 I 183 s canFam3.chr16 15717562 832 - 59632846 TTTTGTATCCAAATATGATGCAGAGTGCTGGCA----CTTAGAGGTTTAACAAATTCATATTTATTTGGTTGTAAAATTCTAGCCCTTGA-ATTGCCTTTCTATCTGGTTTGTTAGATTA--AAAATCCTTAAATGGCTTGGACGCATTATATCTGCTCTGAAATAGGCATAATTCCAATCTATCATGTAGAATTTTTGTGTGGGTTTATAAAAATGGGCTTAATGGCTAAAAAGCAT-ATGTAACATTCATATAAATAATGAGGTTGGTGCATCCAAACAAAAGTGGAGGGATGCTCAGAGGCCAAGTTGACA-AGAGAAG----ACATAACACACACACACCATCTTGGAATGCCTT-AAGTACAGTAAAATTTCAGATATGTAATTATTTAGGGTGAGCCAGGATGCAGAACAGCTGTGTCTGCCTCGCTTAGCAGGTGCCGGGTCCTCAGCCAATCTCTACAGTGGTAGCAAATTAAGGTCACTGGGAAAGGCAGCTCTTGCTGTTCCTGTCACTTTCTAACCATCTG-AAAAATGATGCAGCA-TCGTT-----------------------------CTGCAGGAAGGCTAATAAGCCTTCAAGGAATCGTAGAAGGATACGGAGAACTCGCAAGATCCGAGGGGCATT-GGAACACGAGGAAAGAAAGATGTAGAATTTATCctctttgccatt--aaatttccgggatgaatcctgctccagctgatcacgactcagagttaacatctcggtgcccggcagcagtgtgtgaagtgatgtggtgactcagctctgtctttgagagacaggtgtccactttagagaaccaccaACCCACTCAGAGGCCCTCACGACA--AAGGCAATCAGTGGCTG i canFam3.chr16 C 0 C 0 a score=138636.000000 s hg38.chr4_KI270785v1_alt 33807 39 + 119912 CGTGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT s panTro4.chr4 190306254 39 + 193495092 CGTGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195272298 39 + 198332218 CGTGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111243880 39 + 115148730 CGTGTTCAGCAATGGAGCCGATTGCAGAAAGACCTGTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181046550 39 + 184069350 CATGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186383954 39 + 189454096 CATGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175998742 39 + 178775436 CATGTTCAGCAATGGAGCCGATTGCAGGAAGACCTCTCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132841950 39 + 135778131 CATGTTCAGCAATGGAGCCAATTGCAGGAAGACCTCTCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188227188 39 - 190850796 TGTGTTCAGCAACGGAGCTGATGGCAGGAAGACATCTCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15718394 39 - 59632846 ACTAGTCAGCATCTGAGTCGATTGCAGGAAGGCATCTCT i canFam3.chr16 C 0 C 0 e mm10.chr8 84709056 183 - 129401213 I a score=54743.000000 s hg38.chr4_KI270785v1_alt 33846 12 + 119912 GGGAGAAGAAGA s panTro4.chr4 190306293 12 + 193495092 GGGAGAAGAAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195272337 12 + 198332218 GGGAGAAGAAGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111243919 12 + 115148730 GGGAGAAGAAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181046589 12 + 184069350 GGGAGAAGGAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186383993 12 + 189454096 GGGAGAAGGAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175998781 12 + 178775436 GGGAGAAGGAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132841989 12 + 135778131 GGGAGAAGGAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188227227 12 - 190850796 GGGAGAAGGAGA i calJac3.chr3 C 0 C 0 s mm10.chr8 84709239 12 - 129401213 GGGAGAAGGAGA i mm10.chr8 I 183 I 155 s canFam3.chr16 15718433 12 - 59632846 AGGAGAGAGAGA i canFam3.chr16 C 0 I 2 a score=3346930.000000 s hg38.chr4_KI270785v1_alt 33858 904 + 119912 ATAGGACCAGCCAAACTTCCCTTTAG--AAATAAAATTCAGCTCAATC--CAAAACAGTCATATTGCATTTTTATTATGTCCACCACAGTGAACTGGGGATTGCGGGGGAGAC---AGAGAAGGAAGGCATGGC-TCTGGCTTCAAAGACCTGGTAATCAGATGTGTTCTTCACTGAAAAAGGGAAGAGAGGCAGAAAG--AAGGAAGCCACGTTTGCTGTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAATTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACATAGTAACT---GGCACTTTCTTAGATGTATGTTGCCGATGAAAGAGGGAAAAGATGTAGACAAGAAATCCTCTCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTCTCCTATCAAAGAGACAACTA--------CAAGTGCTGCTTGCTTCTGTGTGTTTGACACCGCAGTCGG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCTGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTACTTAAACAGCTTTCAATTT----------------TGTGAACTTGGAAAAGAAAAGGCCAGCAGAACTAATAAAGTCCACGTGACATCAATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCACTGTCACCAAACATGGGACCTATGTTGCAATTCCCTTTCCTAAGGAGGGTCGTTTTCTGATTGCTGGGCATGAGT-ATGAGTATTTGAGAGGCATCAGATCATAGAAGGAGGCCTTAATAATTGTGGGCATGTACGTGAAGAAAGGGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTTGTCAGGACACCTTCGAG---GGTGGGAACAAGT s panTro4.chr4 190306305 904 + 193495092 ATAGGACCAGCCAAACTTCCCTTTAG--AAATAAAATTCAGCTCAATC--CAAAACATTCATATTGCATTTTTATTATGTCCACCACAGTGAACTGTGGATTGCGGGGGAGAC---AGAGAAGGAAGGCATGGC-TCTGGCTTCAAAGACCTGGTAATCAGATGTGTTCTTCACTGAAAAAGGGAAGAGAGGCAGAAAG--AAAGAAGCCACGTTTGCTGTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAATTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACATAGGAACT---GGCACTTTCTTAGATGTATTTTGCTGATGAAAGAGGGAAAAGATGTAGACAAGAAATCCTCTCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTCTCCTATCAAAGAGACAACTA--------AAAGTGCTGCTTGCTTCTGTGTGTTTGACACCGCAGTCGG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCTGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAATTT----------------TGTGAACTTGGAAAAGAAAAGGCCAGCAGAACTAATAAAGTCCACGTGACATCAATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCACTGTCACCAAACATGGGACCTAGGTTGCAATTCCCTTTCCTAATGAGGGTTGTTTTCTGATTGCTGGGCATGAGT-ATGAGTATTTGAGAGGCATCAGATCGTAGAAGGAGGCCTTAATAACTGTGGGCATGTACGTGAAGAAAGGGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTCGACAGGACACCTTCGAG---GGAGGGAACAAGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195272349 901 + 198332218 ATAGGACCAGCCAAACTTCCCTTTAG--AAATACAattcagctcaatc--caaaacattcatattgcgtttttattatgtccaccacagtgaactggggattgcggggaagac---agagaaagaaggcatggc-tctggcttcaaagacctggtaatcAGATGTGTTCTTCACTGAAAAAGGGAAGAGAGGCAGGAAG--AAAGAAGCCACATTTGCTATCAAG----------GCCTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAACTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACATAGGAACT---GGCACTTTCTTAGATGTATTTTGCCGATGAAAGAGGGAAAAGATGTAGACAAGAAATCCTCTCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTCTCCTATCAAAGAGACATCTA--------AAAGTGCTGCTCGCTTC--TGTGTTTGACACTGCAGTCGG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCTGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAATTT----------------TGTGAACTTGGAAAAGAAAAGGCCAGCAGAACTAATAAAGTCCACGTGACATCGATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCGCTATCACTAAACATGGGGCCTATGTTGCAATTCGCTTTCTTCAGGAGGGTCGTTTTCTGG-TGCTGGGGAGGAGT-ATGAGTATTTGAGAGGCATCAGATCATAGAAGGAGACCTTAGTAATTGTGGGCATGCACATGAAGAAAGGGCAGATGCAACAGTGATTATTTCCTGTTTAGAGATGTTTGACAGGACACCTTCAAG---GGAGGGAACAAGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111243931 902 + 115148730 GTAGGACCAGCCAAACTTCCCTTTAG--AAACAAACTTCAGCTCAACC--CAAAACATTCATATTGCATTTTCATTATGTCCACCACAGTGAACTGGGTATTGCAGGGGAGAC-----AGACGGAGGGCATGGC-TCTGGCTTCAAAGACCTTGTAATCAGATGTGTTCTTCACTCAAAAAGGGAAGAAAGGCAGGAAG--AAAGAAGCCACGTCTGCTGTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATGTACAAACTTAACATTAGTGATTCTCAGAAAAAGACAGGCAGCAGAAACACAGGAACT---GGCACTTTCTTAGATGTATTTTGCCGATGAAAGAGGAAAAATATGTAGACAAGAAATCCTCTCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTCTCCTGTCAAACAGACAACTA--------AAAGTGCTGCCTGTTTCCGTGTGTTTGACACTGCAGTCGG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAACTGGAACAGCCTGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCCTTCAATTT----------------TGTGAACTTGGAAAAGAAAAGGCCAGCAGAACTGATAAAGTCCACGTGACATCGATTCTGTTTCCTTAACACCCAGAAAAATAACAAGTGAAGTCCACTGTCACCAAACATGGGACCTGTGTTGCAATTCCCTTTCCTAAGGAGGGTCGTTTTCTGATTACTGGGGATGAGT-ATGAGTATTTGAGAGGCATCAGATCATAGAAGGAGGCCTTAATAATTGTGGGCATGTACGTGAAGAAAGGGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTTGACAGGACACCTTCGAG---GGAGGGAACAAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181046601 899 + 184069350 ATAGGACCAGCCCAACTTCCCTTTAG--AAATAAAattcagctcaatc--aaaaacattcatattgcatttttattatgttcaccacaatgaactggggattgcgggggagac---agagaaggaaagcatggc-cgtagcttcaaagagcttgtaatcAGATGCGTTTTTCACTTGAAAAGGGAAGACAGGCAGGAA------GAAGCCATGTCTGCTCTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAACTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACACAGGAACC---GGCACTTCCTTAGGTGTATTTTGCCGATGAAAGAGAGAAAAGATGTAGACAAGAAATCCTATCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTGACCTATCAAAGAGACAACTA--------AAAGTGCTGCTTGTTTCTGTGTGTTTGACGCTGCAGTCAG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCCGAGTA-TATCTGGAAGCAAATACTCTACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAGTTT----------------TGTGAACTTGGAAAGGAAAAGGCCAGCAGAACTGATAAAGTCCACATGACATCGATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCACTGTCGCCAAACATGGGACCTATGTTGCAATTCCCTTTCCTAAGGAGGGTCATTTTTTGATTGCTGGGGATGAGT-ATGAATATTTGAGAGGCATCACATCATAGAAGGAGGCCTTAATAATTATGGGCATGTGCGTGAAGAAC-GGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTTGACAGGGCACCTTCAAG---GGAGGGAACAAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186384005 899 + 189454096 ATAGGACCAGCCCAACTTCCCTTTAG--AAATAAAATTCAGCTCAATC--AAAAACATTCATATTGCATTTTTATTATGTTCACCACAATGAACTGGGGCTTGCGGGGGAGAC---AGAGAAGGAAAGCATGGC-CCTAGCTTCAAAGAGCTTGTAATCAGATGCGTTTTTCACTTGAAAAGGGAAGACAGGCAGGAA------GAAGCCATGTCTGCTCTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAACTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACACAGGAACC---GGCACTTCCTTAGGTGTATTTTGCCGATGAAAGAGAGAAAAGATGTAGACAAGAAATCCTATCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTGACCTATCAAAGAGATAACTA--------AAAGTGCTGCTTGTTTCTGTGTGTTTGACGCTGCAGTCAG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCCGAGTA-TATCTGGAAGCAAATACTCTACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAGTTT----------------TGTGAACTTGGAAAGGAAAAGGCCAGCAGAACTGATAAAGTCCACATGACATCGATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCACTGTCGCCAAACATGGGACCTATGTTGCAATTCCCTTTCCTAAGGAGGGTCATTTTTTGATTGCTGGGGATGAGT-ATGAATATTTGAGAGGCATCACATCATAGAAGGAGGCCTTAATAATTATGGGCATGTGCGTGAAGAAC-GGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTTGACAGGGCACCTTCAAG---GGAGGGAACAAGG i macFas5.chr5 C 0 I 272 s papAnu2.chr5 175998793 899 + 178775436 ATAGGACCAGCCCAACTTccctttag--aaataaaattcagctCAATC--AAAAACATTcatattgcatttttattatgttcACCACAATGAACTGGGGATTGCgggggagac---agagaaggaaagcaTGGC-CCTAGCTTCAAAGAGCTTGTAATCAGATGTGGTTTTCACTTGAAAAGGGAAGACAGGCAGGAA------GAAGCCATGTCTGCTCTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAACTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACACAGGACCC---GGCACTTCCTTAGGTGTATTTTGCCgatgaaagacagaaaagatgTAGACAAGAAATCCTATCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTGACCTATCAAAGAGACAACTA--------AAAGTGCTGCTTGTTTCTGTGTGTTTGACGCTGCAGTCAG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCCAAGTA-TATCTGGAAGCAAATACTCTACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAGTTT----------------TGTGAACTTGGAAAGGAAAAGGCCAGCAGAACTGATAGAGTCCACATGACATCGATTCTGTTTCTTTAACACCCAGATAAATAACAAGTGAAGTCCACTGTCGCCAAACATGGGACCTATGTTGCAATTCCCTTTCCTAAGGAGGGTCATTTTTTGATTGCTGGGGATGAGT-ATGAATATTTGAGAGGCATCACATCATACAAGGAGGCCTTAATAATTATGGGCATGTGCGTGAAGAAC-GGCAGATGCAGCAGTGATTATTTCCTGTTTAGAGATGTTTGACAGGGCACCTTCAAG---GGAGGGAACAAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132842001 898 + 135778131 ATAGGACCAGCCCAACTTCCCTTTAG--AAATAAAATTCAGCTCAATC--AAAAATATTCATGTTGCATTTTTATTATGTTCATCACAATGAACTGGGGATTGCAGGGGAGAC---AGAGAAGGAAGGCATGGC-CAGAGCTTCAAAGAGCTTGTAATCAGATGTGTTTTTCACTCGAAAAGGGAAGAGAGGCAGGAA------GAAGCCACGTCTGCTCTCAAG----------CCTTCACCCTACCTTGCTTGC------------------------AAAATTATAATTTACAAACTTAACATTAGTGATTTTCAGAAAAAGATAGGCAGCAGAAACACAGGAACC---GGCACTTCCTTAGGTGTATTTTGCCAATGAAAGAGGGAAAAGATGTAGACAAGAAATCCTACCTTAAAATGGAGAGCTGGGGAAAAGTCGGGCCTGTCTTATCAAAGAGACAACTA--------AAAGTGCTGCTTGTTTCTGTGTGTTTGACGCTGCAGTCAG--TGAA--CTGGGCCAATGTCAGCCC-----ACAGAAATTGGAACAGCCCGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAGTTT----------------TGTGAACTTGGAAAGGAAAAGGCCAGCAGAAATGATAAAGTCCACATGACGTCGA-TCTGTTTCTTTAACACCCAGATAAATAACAAGTGAGGTCCACGGTCGCCAAACATGGGACCTACGTTGCAATTCCCTTTCCTAAGGAGGGTCATTTTTTGATTGCTGGGGATGAGT-ATGAATATTTGAGAGGCATCACATCATAGAAGGAGACCTTAATAATTATGGGCATGTGCGTGAAGAAC-GGCAGATGCAGCAGTGATTGTTTCCTGTTTAGAGATGTTTGACAGGACACCTTCAAG---GGAGGGAACAAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188227239 902 - 190850796 ACAGGACCAGCCAAACTTGCCTTTAG--AAATAAAATTCACCTCGATC--CAAAAATCTCATAGTGCATTTTTATTATGTCCACCACAGTGAATGGGGCATCGCGGGGGACAC---AGAGAAGGAAGACATGGCACCGGGCCTCAAGGAACTTGGAATCTGATGTGTTCTTTGCTCGAAAAGGGAAGAGAGGCAGGAAG--AAAGAAGGCACATCTGTTGTCAAG----------CCTTCACCCTACCTTACTTGC------------------------AAAATTACAATGTACAAACTTAACATGAGTAATTTTCAGAAAAAGGTAAGCAGCAGAAACACAGGAACT---GGCACTTCCTTAGATGTATTTTGCCAGTGAAAGA--GAAAGGATGTAGACAAGAAATCCTCTCTTAAAATGGAAAGCTGGGGAAAGG-CAGGCCTCTCCTATCAAAGAGACAACAA--------AAAGTGTTGCTTGTGTCTGTGTGTCTGACATTGCAGTGGG--TGAA--CTGGTCCAGTGTCAGCCC-----AGAAACATTGCAACAGCCTGAGGATTATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGAGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAACAGCTTTCAATTT----------------TGTGAACTCGGAAAAGAAAAGGCCACCAGAACTGATAAAGTCCATGTGACATTGATTCTATTTCCTTAACACCTGGGTAAATAACATGTGAATTTCATTATCACCAGACGTAGGCCCTGGGTTGTAATTCTGTTTCCTAAGGAGGGAAGTTTTCTGATTGCTGGGAAT-AAT-AAGAGTGTTTGAGAGGCATAAGTTCGTAGAAGGACATCTTAATAATTGTTGGCCTGTATGTGAAGAAAGGGCAGCTGCAGCAGTGATTGTTTCCTATTTAGAGATGGCTGAGTGGAGACCTTCGAA---GGAGGGAACACAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84709406 953 - 129401213 ATGGAAACCACCAAACTTCCTTTTAGGAAAAAAAAATTCCATTCAATTAAAAAAAAATTCCTATTGCTTTTCTGTCATGCTTCCAGCAGTGAAGTGGACAT-GCAGGGAAGAC---AGGGAAAGA-GACATGAT-ATTTACTTCTAGAAATTTCCAGCTGGTCAGACCTTTGCCTTGAAAATGGAATAAAGGCAAGTAG-----AAAATCATGTGCCTTGTCAAATCGAACTCTTTCCTCACTCCAGTTTGCTTGCaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGATAGCTTGCAAGTTTAACATCAGTGAATTCCAGTCAAAGACAGGCAGCAG-----CGAGAACTGCAGGCACTTCTCCTGATGTAGTTTGCCAACGAAA-ACTGGGAAGGTGTAGCACAGAGAGCCATTTTACCCGTGTA--------GAAAAGCAAGGCCTCTCACATCAAAGAGATGGCTATCTTCGGGAAAGCCTTGCTTGCTTCTGTATATTTGGCAATACGGTGGATTTGAA--CTGGACTAGTGTCAGCCCCGGGGGTGAAAAATGGAACCGGCTGAGTC-TATCTGGAAGCAAATACTCCACAGATGGAGAGGGAAGTGGGAGGTTAGCTCAGACCACTTGATTTTAATTAAGCAGCTTTCATTTTTTTTTTTCTGTGTGTGTGTGAACTTGGAAAAGAAAAAGCAAGCAGAACTGATAAAGTCCATGTGACACTGGATCAGTTTCCTCACCACCTAGATAAACAA-GAGCACGTCTCTTAGGGGCAAGGCAAAGGACCTACCTTGCAATTCCTTTGCCTGAGGAGGCATGTGTTCTTACTGCTGGGGATGTGTGGGGAGTATTTGAGAGGAATAGACTCAGAGAAGGAGCCTCTATTCATTTTTGGCATATGTCTGTAGAAT------ATGTAGCAGTGA-TATCTTCTATTTAAAGATGTTTGACAGGACACCCGAGAGAGAGGAGGGAGCGTGG i mm10.chr8 I 155 I 1 s canFam3.chr16 15718447 901 - 59632846 ACAGAAGCAGCC-AGCCTCCCGTTAA--AAACAAAATTCAGTCCAACC--CAAGAAATTCATATTGCATTTCTATTATGTTCACAGCAGTGAATTGGGCATTGCAGGGGAGACCGAGGAGAGGGAAGACAGGGC-ATCTGCGTCAA-GAGCTCGCAATCAGACACGTTCTTCCCTTAAACAGGGAAGAGAGGCAAGAAGAAAAAGAAGTCACATTAGGGATCAAACTAAAATAAGCCTTCACCCTACCTTGCTGGC------------------------AAAATGGCAATTTACAAACTTAGCATCAGCGATTTTCGGAAAGAGATGGGCAGCGTAAATAAAGAAATG---GGAACTTTCTCAGATGTGCTTTATCGGTGAAAGAGGGAAAAG-TGTGGAACCGAAGTCCTCTCTGAAAATGGACAGTTGGGGAAACGCAAGGACTCTCCTATCAAGGAGATAACTGTCTTTGGAATAGTGTTGCTTGCTTCTGTGTGTTTGACACTACAGTGGG-GTGAACTCTGGACCAATGTCAACCC-----ACAAAAACTGGAACAGCCTGAGTA-TATCTGGAAGCAAATACTCCACAGATGGAGAGAGAAGTGGGAGGTTAGCTCAGATCACTTGATTTTAATTAAACAGCTTTCAGTTT----------------TATGAACTTGGAAAAGAAAAGGCAGGCAGAACTGATAAAGTCCATGTGACATTGACTC--TTTCTTGAACATGTCGATAAAAGATAAGAGCAAGGCACTAACTC-----------------TTGCAGTCCCCTTTTCTAGAGAGGATAATGTTCGTGACGCTGGGCTTAAGT-CCCA------GGGAAGCAGAGAATCATAGGAGGAGGCTTTGGCCATTGTTGGCACGTGTCTGAAGAAAGGATGGACATAGCTGTGA-TATTTGCTATTTAGGGATGTTTGACAGAAGACCTTTGAC---GGAGGGAACACGG i canFam3.chr16 I 2 C 0 a score=42896.000000 s hg38.chr4_KI270785v1_alt 34762 10 + 119912 TTCCACGGTT s panTro4.chr4 190307209 10 + 193495092 TTCCATGGTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273250 10 + 198332218 TTCCATGGTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111244833 10 + 115148730 TTCCATGGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181047500 10 + 184069350 TTCCATGGTT i rheMac3.chr5 C 0 I 408 s macFas5.chr5 186385176 10 + 189454096 TTCCATGGTT i macFas5.chr5 I 272 C 0 s papAnu2.chr5 175999692 10 + 178775436 TTCCATGGTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132842899 10 + 135778131 TTCCATGGTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228141 10 - 190850796 GTCCACGGTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84710360 10 - 129401213 TTTTGTGGTT i mm10.chr8 I 1 C 0 s canFam3.chr16 15719348 10 - 59632846 TTTCATGGTT i canFam3.chr16 C 0 C 0 a score=2490.000000 s hg38.chr4_KI270785v1_alt 34772 3 + 119912 AGC s panTro4.chr4 190307219 3 + 193495092 AGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273260 3 + 198332218 AGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111244843 3 + 115148730 AGC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186385186 2 + 189454096 AG- i macFas5.chr5 C 0 C 0 s calJac3.chr3 188228151 3 - 190850796 AGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84710370 3 - 129401213 AGA i mm10.chr8 C 0 C 0 s canFam3.chr16 15719358 3 - 59632846 AGT i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132842909 0 + 135778131 C e papAnu2.chr5 175999702 0 + 178775436 C e rheMac3.chr5 181047510 408 + 184069350 I a score=4095.000000 s hg38.chr4_KI270785v1_alt 34775 1 + 119912 A s panTro4.chr4 190307222 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273263 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111244846 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181047918 1 + 184069350 A i rheMac3.chr5 I 408 C 0 s papAnu2.chr5 175999702 1 + 178775436 A i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132842909 1 + 135778131 A i chlSab2.chr7 C 0 I 272 s calJac3.chr3 188228154 1 - 190850796 A i calJac3.chr3 C 0 C 0 s mm10.chr8 84710373 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 15719361 1 - 59632846 A i canFam3.chr16 C 0 C 0 e macFas5.chr5 186385188 0 + 189454096 C a score=77438.000000 s hg38.chr4_KI270785v1_alt 34776 17 + 119912 GAACAGATGGACGGAAG s panTro4.chr4 190307223 17 + 193495092 GAACAGATGGACGGAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273264 17 + 198332218 GAACAGATGGACGGAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111244847 17 + 115148730 GAACAGATGGACGGAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181047919 17 + 184069350 GAACAGATGGACGGAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385188 16 + 189454096 -AACAGATGGACGGAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 175999703 17 + 178775436 GAACAGATGGACGGAAG i papAnu2.chr5 C 0 I 408 s chlSab2.chr7 132843182 17 + 135778131 GAACAGATGGACGGAAG i chlSab2.chr7 I 272 C 0 s calJac3.chr3 188228155 17 - 190850796 GAACAGGGGGATGGAAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84710374 17 - 129401213 GAACAGATGGACTGATG i mm10.chr8 C 0 I 1 s canFam3.chr16 15719362 17 - 59632846 GAACAGATGGACCGAAG i canFam3.chr16 C 0 C 0 a score=424139.000000 s hg38.chr4_KI270785v1_alt 34793 127 + 119912 GGCAGCT-GAGCCCTGCTTCCACAGTGGACTCCAGAGCTCTTGGGTAACATTTAGGATGCAGCCATCCAGAAACACCGTGAGGCCAAATGCAGGAA-GATGCCAGGACCCAGGTGTACCCAGCGTTGGG s panTro4.chr4 190307240 127 + 193495092 GGCAGCT-GAGCCCTGCTTCCACAGTGGACTCCAGAGCTCTTGGGTAACATTTAGGATGCAGCCATCCAGAAACATCGTGAGGCCAAATGCAGGAA-GACGCCAGGACCCAGGTGTACACAGCGTTGGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273281 127 + 198332218 GGCAGCT-CAGCCCTGCTTCTACAGTGGACTCCTGTGCTCTTGGGTAACATTTAGGATGCAGCTATCCATAAACATCGTGAGGCCAAATGCACGAA-CGTGCCATGACCCATGTGCACCCAGCGTTGGG i ponAbe2.chr4 C 0 I 468 s nomLeu3.chr7b 111244864 127 + 115148730 GGCAGCT-CAGCCCTGCTTCTACAGTGGACTCCAGAGCTCTTGGGTAACATTTACGACGCAGCCATCCAGAAACATCGTGAGGCCAAATGCAGGAA-CATGCCAGGACCCGGGTGTACACAGCGTTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181047936 122 + 184069350 AGCAGCT-CTGCCCTGCTTCTACAGTGGACTCCAGCACTCTTGGGTAACATTTAGGATGCAGCTATC-----ATTTGGTGAGGCCAAATGCAGGAA-CATGCCAGGGCCCAGGTGTACACAGTGTTGGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385204 122 + 189454096 AGCAGCT-CAGCCCTGCTTCTACAGTGGACTCCAGCACTCTTGGGTAACATTTAGGATGCAGCTATC-----ATTTGGTGAGGCCAAATGCAGGAA-CATGCCAGGGCCCAGGTGTACACAGTGTTGGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000128 122 + 178775436 AGCAGCT-CAGCCCTGCTTCTACAGTGGACTCCAGCACTCTTGGGTAACATTTAGGATGCAGCTATC-----ATTTGGTGAGGCCAAATGCAGGAA-CATGCCAGGGCCCAGGTGTACACAGTGTTGGG i papAnu2.chr5 I 408 C 0 s chlSab2.chr7 132843199 122 + 135778131 GGCATCT-CAGCCCTGCTTCGACAGTGGACTCCAGCACTCTTGGGTAACATTTAGGATGCAGCTATC-----ATTTGGTGAGGCCAAATGCAGGAA-CATGCCAGGGCCCAGGTGTACACAGTGTTGGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228172 110 - 190850796 GGCAGCT-CAGTCCGGCTTCTCCAGTGGACTCCAGCACTCTTGGGTCACATTGAGGATGCAGCCACTCAGAAACCCTGTGAGGCCAACTGCAGGAA-CACGCCAAGACCCCG----------------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84710392 129 - 129401213 GGCAGCTCCCGCCCTGCTTCCACAAGCAGCTCCAACACTCTCCATTAACATTTAGGATGAAGCCACCCAGAAAGACCAGGAAGCCTGAAGAAGGAACCCCGCCAGCCTCCAGGTGTACACAGGCCCAGG i mm10.chr8 I 1 I 1 s canFam3.chr16 15719379 129 - 59632846 GGCAGCTCCAGCCCTGCTTCAAAAATTGATTCCAGCACTCTTGGGTAAAATTTAGAATGCAGCCATTCAGAAGCATTGTGAGGCCAGATGCGGGAAGCTTGCCAGGGTCCAGGTGTACACAGGTTGGGG i canFam3.chr16 C 0 C 0 a score=3321.000000 s hg38.chr4_KI270785v1_alt 34920 1 + 119912 G s panTro4.chr4 190307367 1 + 193495092 G i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111244991 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048058 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385326 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000250 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843321 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228282 1 - 190850796 G i calJac3.chr3 C 0 C 0 s mm10.chr8 84710522 1 - 129401213 G i mm10.chr8 I 1 C 0 s canFam3.chr16 15719508 1 - 59632846 A i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195273408 468 + 198332218 I a score=555983.000000 s hg38.chr4_KI270785v1_alt 34921 154 + 119912 TGAACTAGTTTGTTGCTTAGAACTAAAGCTAACT-CAGGTTCTCTTTCTGCAGAAGGCTTTACAAGACCATAAGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAGCCTTC s panTro4.chr4 190307368 154 + 193495092 TGAACTAGTTTGTTGCTTAGAACTAAAGCTAACT-CAAGTTCTCTTTCTGCAGAAGGCTTTACAAGACCATAAGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAGCCTTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195273876 151 + 198332218 TGAACTAGTTTGTTGCTTAGAACTAAAGCTAACT-CAGGTTCTCTTTCTGCAGAAGG--TTACAAGACCAT-AGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAGCCTCC i ponAbe2.chr4 I 468 C 0 s nomLeu3.chr7b 111244992 153 + 115148730 TGAACTAGTTTGTTGCTTAGAACTAAAGCTAACT-CAGGTTCTCTTTCTGCAGAAGGCTTTACAAGACTATAAGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTGTACCATCTTCAC-CCCACCCCTAACCTTACTCATGCCAGCCTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048059 154 + 184069350 TGAACTAGTTCGTTGCTTAGAACTAAAGCTGACT-CAGGTTCTGTTTCTGCAGAAGGCTATACAAGACCAGAAGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAACTTTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385327 154 + 189454096 TGAACTAGTTCGTTGCTTAGAACTAAAGCTGACT-CAGGTTCTGTTTCTGCAGAAGGCTATACAAGACCAGAAGGGAGAAGGGAGAAGGAGAGGCAGTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAACTTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000251 154 + 178775436 TGAACTAGTTTGTTGCTTAGAACTAAAGCTGACT-CAGGTTCTGTTTCTGCAGAAGGCTATACAAGAccagaagggagaagggaggaggagaggcagtCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAACTTTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843322 154 + 135778131 TGAACTAGTTCGTTGCTTAGAACTAAAGCTAACT-CAGGTTCTGTTTCTGCAGAAGGCTATACAAGACCAGAAGGGAGAAGGGAGAAGGAGAGGCGCTCTATAATTGCCTCTACCATCTTCACTCCCACCCCTAACCTTACTCATGCCAACCTTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228283 153 - 190850796 TGAACCAGTTTGTTGCTTAAAACTAAAGCTGACT-CAGTTTCTCTTTCTGCAGAAGGCTTTAGAAGACCATAAGGGAGAGACCAGAAGGAGAGGCCATCTATAACTGCCTCTACCCTCTTCACTCCCACCCC-AGCCTTCATCATGGCAGCCTTC i calJac3.chr3 C 0 I 116 s mm10.chr8 84710523 127 - 129401213 CAAACTACTTCATTGCCCAAAACTAAGGTTGACTCCAGGGTCTCTTTTTG---------------AACCCTCAGAGAGAA-------------GTATTCAACCATTCCTTCTGCCATCTCCATTCCTACCTCCAAACTTGATACCACCTGCTACC i mm10.chr8 C 0 I 3 s canFam3.chr16 15719509 143 - 59632846 TGAACTAGTTTTTTACTTAGAAGTTAAGCTGACT-CGGGTTCTCTTTCTGCTGAAGGCTTTATAAGATCTTAGAGGAGAAGGGAGAAGGAGACACAGTCTACAGTAGCCT----------CATTCCTACC-CTAACCTTATTAATGCCGACCTTC i canFam3.chr16 C 0 C 0 a score=8255.000000 s hg38.chr4_KI270785v1_alt 35075 2 + 119912 TC s panTro4.chr4 190307522 2 + 193495092 TC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274027 2 + 198332218 TC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245145 2 + 115148730 TC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048213 2 + 184069350 TC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385481 2 + 189454096 TC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000405 2 + 178775436 TC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843476 2 + 135778131 TC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228552 2 - 190850796 TC i calJac3.chr3 I 116 C 0 s mm10.chr8 84710653 2 - 129401213 TG i mm10.chr8 I 3 C 0 s canFam3.chr16 15719652 2 - 59632846 TC i canFam3.chr16 C 0 I 167 a score=1009933.000000 s hg38.chr4_KI270785v1_alt 35077 315 + 119912 -------TTCCCACATCCCATACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCATAACTGACATTTTCATATT-G---ACATGTCATGTCTAGGT--CAAttctcagccaagtgtga-ttt-tacttccca--gaggacatttattggtagctagagataactggggttgtcac-----aactgaggagggggatgctactggcatgtagt----ggggagaggccagccatgcagctaaatctcctacaaggcacaagacagcccccaacatttaagaattatt--gggcccacaatgtcaatagtgtcatagttaagaaaccctgGT s panTro4.chr4 190307524 315 + 193495092 -------TCCCCACATCCCATACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCATAACTGACATTTTCATATT-G---ACATGTAATGTCTAGGT--CAAttctcaaccatgtgtga-ttt-tacttccca--gaggacatttattggtagctagagataactggggttgtcac-----agctgaggagggggatgctactggcatgtagt----ggggagaggccagccatgcaggtaaatatcctacaaggcacaagacagcccccaacatctaagaattatt--gggcccacaatgtcaatagtgtcatggttaagaaaccctgGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274029 314 + 198332218 -------TCCCCACATCCCATACTTCTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCATAACTGACATTTTCATATT-G---ACATATAATGTCTAGGT--CAAttctcaaccaagtgtga-ttt-tacttccca--ggggacgtttattggtagctagagataattaaggttgtcac-----agctgagga-ggggatgctactggcatgcagt----ggggagaggccagccatgcagctaaatatcctacaaggcacaagacagcccccaacatctaagaattatt--gggcccacagtgtcaatagtgtcatggttaagaaaccgtgGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245147 312 + 115148730 -------TCCCCACATCCCATACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCATAACTGACATTTTCATATT-G---GCATATAATGTTTAGGT--CAAttctcaaccaagtgtg----c-tacttccca--ggggacattcaatggtagctagagataattggggttgtcac-----aactgagaagggggatgctactggcatgtagt----ggggagaggccagccatacagctaaatatcctacaaggcacaagacagcccccaacatctaagaattatt--gggcccacaatgtcaatagtgtcatggttaagaaaccctgGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048215 309 + 184069350 -------CCCCCACAGCCTGTACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCGTAACTGACATGATCATACT-G---ACATATAACGTGTAGGT--CAATCctcaaccaagtgtga-ttt-tacttccca--ggggacatttaatga----tagagataattggggttgttac-----aactgagga-gagaatgctactggcgtgtagt-----gggagaggccagccatgcagctaaatatcctacatggcacaagacggcccccaacatctaagaattgtt--gggcctacaatgtcaatagcgtcatggttaagaaaccctgGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385483 309 + 189454096 -------CCCCCACAGCCTGTACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCGTAACTGACATGATCATACT-G---ACATATAACGTGTAGGT--CAAtcctcaaccaagtgtga-ttt-tacttccca--ggggacatttaatga----tagagataattggggttgttac-----aactgagga-gagaatgctactggcgtgtagt-----gggagaggccagccatgcagctaaatatcctacatggcacaagacggcccccaacatctaagaattgtt--gggcctgcaatgtcaatagcgtcatggttaagaaaccctgGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000407 309 + 178775436 -------CCCCCACAGCCTGTACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCATAACTGACATGATCGTACT-G---ACATATAATGTCTAGGT--CAATTCTCAACCAAGTGTGA-TTT-TACTTCCCA--GGGGACATTTAATGA----TAGAGATAATTGGGGTTGTTAC-----AACTGAGGA-GAGAATGCTACTGGCGTGTAGT-----GGGAGAGGCCAGCCATGCAGCTAAATATCCTACATGGCACAAGACGGCCCCCAACATCTAAGAATTGTT--GGGCCTACAATGTCAATAGCGTCATGGTTAAGAAACCCTGGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843478 309 + 135778131 -------CCTCCACATCCCGTACTTTTCTTATTCAGAATTCATTAGCCAGAAAATATAGTAGCAGCCGTAACTGACATGATCATACT-G---ACATATAATGTCTAGGT--CAAttctcaaccaagtgtga-ttt-tacttccca--ggggacatttaatga----tagagataattggggttgttac-----aactgagga-gagaatgctactggcgtgtagt-----gggagaggccagccatgcagctaaatatcctacatggcacaagacggcccccaacatctaagaattgtt--gggcctacaatgtcaatagcgtcatagttaagaaacccAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228554 314 - 190850796 -------TCCCCATGTCCCACACTTTTCTACTTCGGAATTCATTAGTCAGAAAATAGTGTAGCAGCCATAACGGACATTTTCATGTT-G---ACATGTAATTTCTAGGT--CAAttctcaaccaagtgtga-ttt-tacttccca--ggggacatttaaggatagctaaggataattgggattgtcac-----agctgaggaggggggtgct-ccagcatgtagt----gggtagaggccagccgtgcagccaaatgtcctacaacgcacaggacagcccctaacacctaagaattatg--ggccccacaatgtcaacagtgtcatggttaggaaatcctgGT i calJac3.chr3 C 0 C 0 s mm10.chr8 84710655 277 - 129401213 -------TCCTTA-AGCCCAGCCCTTTCTTGCTTAGAACTGATTATCCAGAAAATCTAGTAGCGGTCATTGTTGGACTTTTAATATTGG---ACATATGCTGGATAGGT--CATttctccacagggagtgatttt-tacctctca--ggggacatgtggcagcatctgtgactattttaggttgtcaa-----gacagggca--ggagCACCGCAAACA------------------------CATGTATGTATGTAATATACAAC-----------------ATTTCTACAGAATATC--GCTCTCAGATTGTCAGCAGCATTGAATCTGAGCAACTACAAT i mm10.chr8 C 0 C 0 s canFam3.chr16 15719821 338 - 59632846 tacccTCCCCCCACAT---ATTTTTTTCTTATTTGGAAATAACTAGCCAGAAAATATAGATGTAGCCATTATAGACATTCTAATATT-GAAAACACAAGGTTTTAAGGTGGCTgtccttaattgggggtga-ttcacacctctccatggggatatctggcaatatctagagatgatttaggttgtcacctaaaagcatgggaagagcatgctcctggcatgtagtaagtaggtggaggccagtgatgcagctaactatcctacaatgcacaggacactcccccacaattaaggattactgggggtcccaaatgtcaatagcaccaaggttgagaaaccccgGG i canFam3.chr16 I 167 C 0 a score=8595.000000 s hg38.chr4_KI270785v1_alt 35392 2 + 119912 CT s panTro4.chr4 190307839 2 + 193495092 CT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274343 2 + 198332218 CT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245459 2 + 115148730 CT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048524 2 + 184069350 CT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385792 2 + 189454096 CT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000716 2 + 178775436 Ct i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843787 2 + 135778131 CT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228868 2 - 190850796 CT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15720159 2 - 59632846 CT i canFam3.chr16 C 0 C 0 e mm10.chr8 84710932 0 - 129401213 C a score=9176.000000 s hg38.chr4_KI270785v1_alt 35394 3 + 119912 AAg s panTro4.chr4 190307841 3 + 193495092 AAg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274345 3 + 198332218 AAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245461 3 + 115148730 AAg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048526 3 + 184069350 AAg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385794 3 + 189454096 AAg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000718 3 + 178775436 aag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843789 3 + 135778131 AAg i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15720161 3 - 59632846 AGG i canFam3.chr16 C 0 I 24 e mm10.chr8 84710932 0 - 129401213 C e calJac3.chr3 188228870 0 - 190850796 C a score=705205.000000 s hg38.chr4_KI270785v1_alt 35397 303 + 119912 gccagacgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctgaccaacatggagcaaacccatctctactaaatatacaaaattagccgggcgtggtggcacatgacagtaatcacagctgctcaggagtctgaggcaggagaattgcttgaaccccggcggcggaggttgcggtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaactccatctagaaaaaagcaaaacaaaaCCGG s panTro4.chr4 190307844 303 + 193495092 gccagacgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcccgaccaacatggagcaaacccatctctactaaatatacagaattagctgggcgtggtggcacatgactgtaatcccagctactcgggagtctgaggcaggagaattgcttgaaccccggaggcggaggttgcggtgagccgagatcacgccattgcactccagcctgggcaacaagagcgaaactccatctagaaaaaagcaaaacaaaaCCGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274348 303 + 198332218 TccagacgtggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagactagcctgaccaacatggagcaaacccgtctctactaaatacacaaaattagccgggcgtggtggcacatgactgtaatcccagctactcgagagtctgaggcaggagaatcgcttgaaccccggaggcggaggttacggtgcgctgagatcacaccattgcactccagcctgggcaacaagagcaaaactccgtctagaaaaaaacaaaacaaaaCCGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245464 296 + 115148730 gccagacgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtagcgagtttgagaccagcctgatcaacatggagcaagcccatctctactaaatacacaaaattagctgggcgtggtggcacacgactgtaatcccagctactcgggagtctgaggcaggagaattgcttgaaccccggaggcggaggttgcggtgagctgagatcacgccattgcactccagcct-ggcagcaagagcaaagctccatctagaa------aaaacaaaaCTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048529 302 + 184069350 gccagacgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagcaaaaccatctctactaaatatacaaaattagccgagcatggtggcacgtgactgtaatcccagctactcaggagtctgaggcaggagaatcgcttggaccctggaggcggaggttgtggtgagccgagatcgtgccactgcactccagccagggcaacaagagcaaaactccgtctagaaaaaca-aaaacaaaaaCAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186385797 302 + 189454096 gccagacgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagcaaaaccatctctactaaagatacaaaattagccgagcatggtggcacgtgactgtaatcccagctactcaggagtctgaggcaggagaatcgcttggaccctggaggcggaggttgtggtgagccgagattgtgccactgcactccagccagggcaacaagagcaaaactccgtctagaaaaaca-aaaacaaaaaCAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176000721 302 + 178775436 gccggacgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagcaaacccgtctctactaaatatacaaaattagccaagcatgatggcacgtgactgtaatcccagctactcaggagtctgaggcaggagaatcgcttggaccctggaggcggaggttgtggtgagccgagattgtgccactgcactccagccagggcaacaagagcaaaactccgtctagaaaaaca-aaaacagaaacag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132843792 302 + 135778131 gccggacgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaagagtttgagaccagcctgaccaacatggagcaaacccgtctctactaaatatacaaaattagctgagcatggtggcacatgactgtaatcccagctactctggagtctgaggcaggagaatcgcttggaccctggaggcggaggttgtggtgagccgagattgcgccactgcactccagccagggcaacaagagcaaaactccgtctagaaaaaca-aaaacaaaaaCAG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15720164 24 - 59632846 I e mm10.chr8 84710932 0 - 129401213 C e calJac3.chr3 188228870 0 - 190850796 C a score=22415.000000 s hg38.chr4_KI270785v1_alt 35700 9 + 119912 AAACCCTGG s panTro4.chr4 190308147 9 + 193495092 AAACCCTGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274651 9 + 198332218 AAACCCTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245760 9 + 115148730 AAACCCTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048831 9 + 184069350 AATCCCTGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386099 9 + 189454096 AATCCCTGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001023 9 + 178775436 aatccCCGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844094 9 + 135778131 AATCCCTGA i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15720188 9 - 59632846 AAATCCTGG i canFam3.chr16 I 24 C 0 e mm10.chr8 84710932 0 - 129401213 C e calJac3.chr3 188228870 0 - 190850796 C a score=8128.000000 s hg38.chr4_KI270785v1_alt 35709 3 + 119912 TCC s panTro4.chr4 190308156 3 + 193495092 TCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274660 3 + 198332218 TCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245769 3 + 115148730 TCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048840 3 + 184069350 TCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386108 3 + 189454096 TCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001032 3 + 178775436 TCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844103 3 + 135778131 TCT i chlSab2.chr7 C 0 C 0 s mm10.chr8 84710932 3 - 129401213 TTT i mm10.chr8 C 0 C 0 e canFam3.chr16 15720197 0 - 59632846 C e calJac3.chr3 188228870 0 - 190850796 C a score=1788976.000000 s hg38.chr4_KI270785v1_alt 35712 516 + 119912 AAGTTAAGATGTG--AATTTTGCTGAGAAAAACTGGAAAGGTTGAATGGAGTCGGATCAAGTTGTGATGGTGGATCTAA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATA---TTAGCAGGCAGTTTTAGTGATGTTTTTGTCATCGGTGCTC---TTCTAACAGCCCTGATGATGGATTTCC-TTTTTATAACATGTTGCAGATCACACTTGTGAATCACATCTTCATTCTGTCAGTTGCTGACTTTGGGGGAGAGGT--GAGATTTCCTACCTA-CCTTCTAATCTACATTCTCTTGTTTTTCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------CTTGAGGACATTTACATACCCAGTGAGAAACAACAACATACTTTGCATGGCCACTGGTTTGATGTTCATTCTCTtttaatttatttgaatttaattaagataa-tcttatttaGAACTCAACTATTAACATGGCGAATACATTGGTTCAGTCGTGTGAACCAACAAAAG s panTro4.chr4 190308159 516 + 193495092 AAGTTAAGATGTG--AATTTTGCTGAGAAAAACTGGAAAGGTTGAATGGAGTCGGACTAAGTTGTGATGGTGGATCTAA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATA---TTAGCAGGCAGTTTTAGTGATGTTTTTGTCATCAGTGCTC---TTCTAACAGCCCTGATGATGGATTTCC-TTTTTATAACATGTTGCAGATCACACTTGTGAATCACATCTTCATTGTGTCCGTTGCTGACTTTGGGGGAGAGGT--GAGATTTCCTACCTA-CCTTCTAATATACATTCTCTTGTTTTTCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------CTTGAGGACATTTACATACCCAGTGAGAAACAACAACATACTTTGCATGGCCACTGGTTTGATGTTCATTCTCTTTTAATTTATTTGAATTTAATTAAGATAA-TCTTATTTAGAACTCAACTATTAACATGGCGAATACATTGGTTCAGTTGTGTGAACCAACAAAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195274663 515 + 198332218 AAATTAAGATCTG--ATTTTTGCTGAGAAAAACTGGAAAGGTTGAATGGAGTCGGATCAAGTTGTGATGGTGGATCTAA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATA---TTAGCA-GCAGTTTTAGTGATGTTTTTGTCATCAGTGCTC---TTCTAACAGCCCTGATGATGGATTTCC-TTCTTATAACATGTTGCAGATCACACTTGTGAATCACATCTTTGTTCTGTCCGTTGCTGACTTTGGGGGAGAGGT--GAGATTTCCTGCCTA-CCTTTTAATCTACATTCTCTTGTTTTCCCTAAGTGGGAAGGACCTTGTTGTCTAATGATC-TTTTTCGCT------CTTGAGGACATTTACATACCCAGTGAGAAACAACAACATACTTTGCATGGCCATTGGTTTGATGTTCATTCTCTTTTAATTTATTTGAATTTAATTACGACAA-TCTTATTTAGAGCTCCATTATTAACATGGCAAATACATTGGTTCAGTCGTGTGAACCAATAAAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111245772 516 + 115148730 AAGTTAAGATCTG--AATTTTGCTGAGAAAACCTGGAAGGGTTGAATGGAGTCGGATCAAGTTGTGATGGTGGATCTAA-TTTTATAAAGTTGATTTTAGACTTTATTTTATTGGTCATTAAGTA---CTAGCAGGCAGTTTTAGTGATGTTTTTGTCATCCGTGCTC---TTCTAACAGCCCTGATGATGGATTTCC-TTTTTATAACATGTTGCAGATCACACTTGTGAATCACATCTTCGTTCTGTCAGTTGCTGACTTTGCGGGAGAGGT--GAGATTTCCTATCTA-CCTTCTCATCTACGTCCTCTTGTTTTCCCTAAGTGGGAAGGACCTTGTTGTCTAATGATC-TTTTTTGCT------CTTGAGGACATTTACATACCCAGTGAGAAATAACAACGTACTTTGCATGGGCACTGGTTTGATGTTCATTCTCTtttaatttatttgaatttaattaagataa-tcttatttaGAGCTCCGTTATTAACATGGCGAATACATTGGTTCAGTCGTGTGAACCAACAAAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181048843 511 + 184069350 AAGTTAAGATCTG--ATTTTTGCTGAGAAGAACTGGAAAGGTTGAATGGAGTTGGATCAAGTTGTGATGGTGGATCTGA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATA---TTAGCCGGCAGTTTTAGTGATGTTTTTGTCATCAGTGCTC---TTCTAACAGCCCTGACGATGAATTTCT-TTTTTATAACATGTTGCAGATCACACTGGAGAATCACATCCTCGTTCTGTCAGTTGTTGACTTTGGGCGAGAGGT--GAGATTTCCTACCTA-CCTTCTAATCTACATTCTCTTGTTTTCCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------TCTGAGGACATTTACATACCCAGTGAGAGATAACAACATACTTTGCATGGCCATTGGTTTGATGTTCGTTCTCT-----TTTATTTGAATATAATTAAGATAA-TCTTGTTTAGAGCTCCATTATTAACATGGCGAATACATTGGTTCAGTTGTGTGAACCAACAAAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386111 511 + 189454096 AAGTTAAGATCTG--ATTTTTGCTGAGAAAAACTGGAAAAGTTGAATGGAGTCGGATCAAGTTGTGATGGTGGATCTGA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATA---TTAGCCGGCAGTTTTAGTGATGTTTTTGTCATCAGTGCTC---TTCTAACAGCCCTGACGATGAATTTCT-TTTTTATAACATGTTGCAGATCACACTGGAGAATCACATCCTCGTTCTGTCAGTTGTTGACTTTGGGCGAGAGGT--GAGATTTCCTACCTA-CCTTCGAATCTACATTCTCTTGTTTTCCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------CCTGAGGACATTTACATACCCAGTGAGAAATAACAACATACTTTGCATGGCCATTGGTTTGATGTTCGTTCTCT-----TTTATTTGAATATAATTAAGATAA-TCTTGTTTAGAGCTCCATTATTAACATGGCGAATACATTGGTTCAGTTGTGTGAACCAACAAAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001035 517 + 178775436 AAGTTAAGATCTG--ATTTTtgctgagaaaaactggaaaggtTGAGTGGAGTTGGATCAAGTTGTGATGGTGGATCTGATTTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATTAAATG---TTAGCCGGCAGTTTTAGCGATGTGTTTGTCATCAGTGCTC---TTCTCACTGCCCTGAcgatgaatttct-tttttataacatgTTGCAGATCACACTGGAGAATCACATCCTCGTTCTGTCAGTTGTTGACTTTGGGCGAGAGGT--GAGATTTCCTACCTA-CCTTCTAATCTACATTCTCTTGTTCTCCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------CCTGAGGACATTGACATACCCAGTGAGAAATAACAACATACTTTGCATGGCCATTGCTTTGATGTTCgttctcttttaatttatttgaatataattaaGATAA-TCTTGTTTAGAGCTCCATTATTAACATGGCGAATACATTGGTTCAGTTGTGTGAACCAACAAAAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844106 516 + 135778131 AAGTTAAGATCTG--ATTTTTGCTGAGAAAAACTGGAAAGGTTGAATGGAGTTGGATCAAGTTGTAATGGTGGATCTGA-TTTTATAAAGTTGATTTTAGACTTTATTTCATTGGCCATGAAATA---TTAGCCGGCAGTTTTAGTGATGTTTTTGTCGTCAGTGCTC---TTCTAACAGCACTGACGACGAATTTCC-TTTTTATAACATGTGGCAGATCACACTGGAGAATCACATCCTCGTTCTGTCAGTTGTTGACTTTGGGTGAGAGAT--GAGATTTCCTAACTA-CCTTCTAATCTACATTCTCTTGTTTTCCCTAAGTGGGAAGGATCTTGTTGTCTAATGATC-TTTTTTGCT------CCTGAGGACATTTACATACCCAGTGAGAAATAACAACATACTTTGCATGGCCATTGGTTTGATGTTCATTCTCTTTTAATTTATTTGAATATAATTAAGATAA-TCTTGTTTAGAGCTCCATTATTAACATGGCGAATACATTGGTTCAGTTGTGTGAACCAACAAAAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188228870 515 - 190850796 AGGTTAAGGTCTG--ATTTTTGCTGAGAAAAGCTGGAAAGGTTGAAGGGAATTGGATCAAGTTGTGCCGGTGGATCTAC-TTTTATAAAGTTGATTTTAGACTTTATTTGGTTGGCCATTAAATA---CCAGCCGGCAGTTTGAGTGAC-TTTTTGCCATCCGTGTTC---GTCTGACAGCCTTGATGACCAATTTCCTTTTTTATAACGTGGTGCACGTCGCACTTGGGAGTCACATCTTTATTCTGTCAGTTGCTGACTTTGAGAGACAGGT--GAGATTTCCTACCTG-CCTTCTACTCTAGATTCTCTTGTTCTCCCTAAGTGGAACGGATCTCTTTGCCTAATGATCTTTTTTTGCT------CCTGAAGAAATGTACATTCCCAGTGAGAAATAACAGCACACTCTACGTGACCACTGGTTTGATGTTCATTCTCT--TAATTTATTTGAATTTAATTAAGATGA-TCTTATTTAGAGCTCCATTATTAACATTCCCACTACGTTTGTTCAGTCATGTGAACCATCTGGAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84710935 503 - 129401213 AAGTGAAGATCTGATATTTTGGCTGAGGAAAGTTGGAAGGGTTGAGTGGAGTCGCAGCACGCTGCACTGGCGGATATAA-TTCTGGGAGTTTTGCTTTAAGCCATTTTTCGTTGGCTTTTAAGTAGAGTTTGTAGACCTTTTT-------TTTTTTTTTTTGGCACTCAGATCCTTATAGTCCTAATTGTTAGT---C-TTCTTATGAAGTGTGGCAGCTCACACATCAGAATCTCATCCT-----TGTCAGCTGTGATCTTTGAGGCAGACATAAGGGATTTCCTACGAG-TCTTGGAATCTCCGT-CTCCTGGTTTTGGCAGGTGGGAGGAATCTCATTGTCTAATGATC-ACTTTTGCC------TCAGAGGA-AGTGGCAGGCAGAGTGAGAAATAGTGGCATATTTCACACTCCTCATTGTTGGA---ACATTCTCCTTTATTTTGTTAAATTTTCATTAAATAAC-TCCCAT---GTGTTACATTATTAATAATGTGAACCTGTTTGTTAGGTAAAGTAAATTTAAAGAAG i mm10.chr8 C 0 C 0 s canFam3.chr16 15720197 484 - 59632846 ------------------------------------AAAGGCTGAGTGGGGTTGAAGGAAGTTGTGCAGGCTGACCTAA-TTTTATAAGATTGATCTCGGGCTTTATTTTATTGGCCATGATGTA---TTAGCAGGTAGTTTTCATGATGTTTTTGTCACAAG-GTTC---TTCTTATAGCCTCAGTCATTAAT---C-ATCTTGAGAAATGTTGCAGATCACACTTGTGAATTTCATCTTGGTTCTGTTGACTGCTGACTTTGATGGAGAAGT--GAGATTTCCTCCCTAGCCTTCAAATCTAGATTCTCTTGTTTTAGGTAAGTGGAAAGAATCTTCCCGTC-AATGATT-TTTTTTTTTTTTTCACCTGAGGAGATT-ATACACTCAGCAAGAACCAACGTCATATTTTGGATGGCCATTGCTGGAATATTTACTCTGTTTTATTTTATTGAAATTTAACTGGAGTAATTTTTATTTATAGCTTCATTGTTAATATTGCAAATATGTTTGTTCCTTAAAGTGAATCAAGGAAAA i canFam3.chr16 C 0 C 0 a score=3321.000000 s hg38.chr4_KI270785v1_alt 36228 1 + 119912 G s panTro4.chr4 190308675 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275178 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246288 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181049354 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386622 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001552 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844622 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s mm10.chr8 84711438 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 15720681 1 - 59632846 G i canFam3.chr16 C 0 C 0 e calJac3.chr3 188229385 0 - 190850796 C a score=3190.000000 s hg38.chr4_KI270785v1_alt 36229 7 + 119912 -TTTTTTT s panTro4.chr4 190308676 7 + 193495092 -TTTTTTt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275179 7 + 198332218 -ttttttt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246289 7 + 115148730 -TTTTTTT i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 15720682 7 - 59632846 ATTTTCC- i canFam3.chr16 C 0 C 0 e mm10.chr8 84711439 0 - 129401213 C e calJac3.chr3 188229385 0 - 190850796 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C a score=-629.000000 s hg38.chr4_KI270785v1_alt 36236 12 + 119912 ATTTTTTAATTt s panTro4.chr4 190308683 3 + 193495092 att--------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275186 12 + 198332218 attttttaattt i ponAbe2.chr4 C 0 I 3 s nomLeu3.chr7b 111246296 6 + 115148730 AATTTT------ i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e mm10.chr8 84711439 0 - 129401213 C e calJac3.chr3 188229385 0 - 190850796 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C a score=576.000000 s hg38.chr4_KI270785v1_alt 36248 17 + 119912 atatatatatatatata s panTro4.chr4 190308686 16 + 193495092 -tatatatatatatata i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111246302 4 + 115148730 -------------TTTA i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e mm10.chr8 84711439 0 - 129401213 C e calJac3.chr3 188229385 0 - 190850796 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C e ponAbe2.chr4 195275198 3 + 198332218 I a score=6567.000000 s hg38.chr4_KI270785v1_alt 36265 17 + 119912 tatatatataGtttttt s panTro4.chr4 190308702 17 + 193495092 tatatatatagttttta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275201 16 + 198332218 tatatatataGttttt- i ponAbe2.chr4 I 3 C 0 s nomLeu3.chr7b 111246306 16 + 115148730 TATATATATAGttttt- i nomLeu3.chr7b C 0 C 0 s mm10.chr8 84711439 10 - 129401213 -----ATAGATTTTT-- i mm10.chr8 C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e calJac3.chr3 188229385 0 - 190850796 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C a score=110280.000000 s hg38.chr4_KI270785v1_alt 36282 226 + 119912 ttattatactttaagttctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatttctcctagtgctatccctcccccctccccccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccaagtgttctcattgAATGGGCAAAAGCCAACAAAA- s panTro4.chr4 190308719 226 + 193495092 aaattatactttaagttctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatttctcctaatgctatccctcccccctccccccaccccacgacaggccccggtgtgtgatgttccccttcctgtgtccaagtgttctcattgAATGGGCAAAAGCCAACAAAA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275217 227 + 198332218 ttattatactttaagttttagggtacatgtgcataatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtacatctcctaatgctatccctaccccctccccccaccccacaacaggccccggtgtgtgatgttccccttcctgtgtccaagtgttctcatGGAATGGGCAAAAGCCAACAAAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246322 211 + 115148730 ttattatactttaagttctagggtacatgtgcacaacgtgcaggcttgttacatatgtacatatgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatttctcctaatgctgtccctccccgctccccccaccccacaac---------------atgttccccttcctgtgtccaagtgttctcattgAATGGGC-AAAGCCCACAGAAG i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e mm10.chr8 84711449 0 - 129401213 C e calJac3.chr3 188229385 0 - 190850796 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C a score=1000.000000 s hg38.chr4_KI270785v1_alt 36508 1 + 119912 G s panTro4.chr4 190308945 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275444 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246533 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188229385 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e mm10.chr8 84711449 0 - 129401213 C e chlSab2.chr7 132844623 0 + 135778131 C e papAnu2.chr5 176001553 0 + 178775436 C e macFas5.chr5 186386623 0 + 189454096 C e rheMac3.chr5 181049355 0 + 184069350 C a score=15064.000000 s hg38.chr4_KI270785v1_alt 36509 5 + 119912 TTTTG s panTro4.chr4 190308946 5 + 193495092 TTTTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275445 5 + 198332218 TTTTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246534 5 + 115148730 TTTTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181049355 5 + 184069350 TTTTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386623 5 + 189454096 TTTTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001553 5 + 178775436 TTTTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844623 5 + 135778131 TTTTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188229386 5 - 190850796 TGTTG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C e mm10.chr8 84711449 0 - 129401213 C a score=4095.000000 s hg38.chr4_KI270785v1_alt 36514 1 + 119912 A s panTro4.chr4 190308951 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275450 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246539 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181049360 1 + 184069350 A i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386628 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001558 1 + 178775436 A i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844628 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188229391 1 - 190850796 A i calJac3.chr3 C 0 C 0 s mm10.chr8 84711449 1 - 129401213 A i mm10.chr8 C 0 C 0 e canFam3.chr16 15720689 0 - 59632846 C a score=2016626.000000 s hg38.chr4_KI270785v1_alt 36515 631 + 119912 TGTGAAGCCTGCAG-CATGCTCTCCATCTGATTG-TGTTTATC-TTCCTTTCTGATCTCTCGGGGTAACTAACTACTGCTTCTGGGGCAGATGGCATGATGGCTTCTTCTGCTGGGCTGTGCTGCATGACTTGAGATATGGCAGAAATCTGGAGATTTAGTGCAGatgcccaaatattagttgacctcaaatataaaacactct----tgatg--agaagttcctgaa---------gtttttttctttttttgggccatcttgaacatatgaatattgagatttagataaaataatcaatacagttaatta-attta--------atatttaataaatttagttgtatccata-atttaaaattcctttattatctaagataacatttgaacagtattt-ttttcgacttctcactttggtaaaacaatttagttcggctcatgatgtgtggctctaaataggggatcttcatcatcaccagaactac--tttct--------gagctctct---------------------------------------------------------ccta------------------------tgacatttt---------tcccacgtcgtaatccattgatttttttgagaagt---agttttttaaataatatat-gtgatgtcat-tggaaattgtatcccatgctgtagctgcccattcacacaacattaaaaattacttttt--cattcatcttT--------TTACATGCCTG s panTro4.chr4 190308952 626 + 193495092 TGTGAAGCCTGCAG-CATGCTCTCCATCTGATTG-TGTTTAGT-TCCCTTTCTGATCTCTCAGGGTAACTAACTACTGCTTCTGGGGCAGATGGCATGATGGCTTCTTCTGCTGGGCTGTGCTGCAGGACTTGAGATATGGCAGAAATCTGGAGGTTTAGTGCAGatgcccaaatattagttgacctcgaatataaaacactct----cgatg--agaagttcctgag---------gtttttttccttttttgggccatcttgaacatatgaatattgagatttagataaaataatcaatacagttaa------tta--------atatttaataaatttagttgtatccata-atttaaaattcctttattatctaagataacatttgaacagtattt-ttttcgacttctcactttggtgaaacaatttagttcagctcatcacgtgtgtctctaaataggggatcttcatcatcaccagaactac--tttct--------gagctctct---------------------------------------------------------ccta------------------------tgacatttt---------tcccacgtcataatccattgatttttttgagaagt---agttttttaaataatatat-gtgatgtcat-tggaaattgtatcccatgctgtagctgcccattcacacaacattaaaaattacttttt--cattcatcttt--------ttacatgcctg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195275451 631 + 198332218 TGTGAAGCCTGCAG-CATGCTCTCCATCTGACTG-TGTTTAGT-TTCCTTCATGGTCTCTCAGGATAACTAAGTACTGCTTCTGGGGCAGATGGCATCATGGCTTCTTTTGCTGGGCTGTGCTGCATGACTTGAGATATGGCAGAAACTTGGAGATTTAGTGCAGatgcccaaatattagttgacctcaaatataaaacactct----tgatg--agaagttcctgaa---------gtttttttcttttttgggtccatcttgaatatatgaatattgagatttagataaaataatcaatacatttaatta-attta--------atatttaataaatttagttgtatccata-atttaaaattccttgattgtctaagataacacttgaacagtactt-ttttcgacttgtaactttggtaaaacaatttagttcggctcatcacgtgtatctctaaataggggatcttcatcatcaccagaactac--tttct--------gagctcttt---------------------------------------------------------ccta------------------------tgaaatttt---------tcccacgtcataatccattga-ttttttgagaagt---agtttttttaatgatacatggtgatgtcat-cagaaattgtatcccatgctgtaggtgcccattcacacaacattaagaattacttttt--cattcatcttt--------ttacatgtctg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111246540 632 + 115148730 TGTGAAGCCTGCAG-CATGCTCTCCATCTGACTG-TGTTTCGT-TTCCTTTGCGATCTCTCAGGGTAACTGACTACTGCTTCTGGGGCAGATGGCATGATGGCTGCTTTTGCTGGGCTGTGCTCCATGACTTGAGATATGGCAGAAATTGGGAGATTTAGTGCAGatgcccaaatattagttgacctcgaatataaaacaccct----tgatg--agaagttcctgcg---------gttgttttctttttgggggccatcttgaacatgtgaatattgagatttagataaaataatcaatacatttaatta-attta--------atatttaataaatttagctatatccata-atttaaaattcctttattacctaagataacacttgaacagtattt-ttttcgacttctaactttggtaaaacaatttagttcggctcatcacgtgtgtctctaaatagaggatcttcatcatcaccagaactac--tttct--------gagctctct---------------------------------------------------------ccta------------------------tgacatttt---------ccccacatcataatccaccgatttttttgagaagt---agtttttttaatgatacatggtgatgtcat-tggaaattgtatcccatgccgtaggtgcccattcacacaacattaaaaattacttttt--cattcatcttt--------ttacatgtctg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181049361 628 + 184069350 CGTGACGCCTGCAG-CATGCCCTCCATCTGATTG-TGTTTAGT-TTCCTTCGTGATCTCTCTGGGTAACTAACTACCGCTTCTGGGGCAGGTGGCATGATGGCTTCCTTTGCTGGGCTGTGCTCCGTGACTTGAGATATGGCAGAATTC------TTTAGTGCAGatgcccaactattagttgacctcgaatataaaacactct----tgatg--agaatttcctgaa---------gtttttttctttttttgggccatcttgaacatatgaatattgagatttagataaaatagtcaatacattgaatta-attta--------atatttaacaaattttgttgtatccata-atttaaaattcctttattatctaagataacacttgaacagtattt-ttttcgacttctaactttggtgaaacaatttagttcagctcatcatgtgtgtctctaaataggggatctgcgtcatcaccagaactgc--ttttt--------gagttctc----------------------------------------------------------ccta------------------------tgaaatttt---------tcccatgtcataatccactgacgtttttgagaagtagaagtttttttaatgatacatggtgatgtcat-tggaaattgcatcccatgccataggtgcccattcacacaacattaagaattacttttt--CGTTCATCTTT--------TCACATGTCtg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186386629 628 + 189454096 CGTGACGCCTGCAG-CATGCCCTCCATCTGATTG-TGTTTAGT-TTCCTTCGTGATCTCTCTGGGTAACTAACTACCGCTTCTGGGGCAGGTGGCATGATGGCTTCCTTTGCTGGGCTGTGCTCCGTGACTTGAGATATGGCAGAATTC------TTTAGTGCAGatgcccaactattagttgacctcgaatataaaacactct----tgatg--agaagttcctgaa---------gtttttttctttttttgggccatcttgaacatatgaatattgagatttagataaaatagtcaatacattgaatta-attta--------atatttaacaaattttgttgtatccata-atttaaaattcctttattatctaagataacacttgaacagtattt-ttttcgacttctaactttggtgaaacaatttagttcagctcatcatgtgtgtctccaaataggggatctgcgtcatcaccagaactgc--ttttt--------gagttctc----------------------------------------------------------ccta------------------------tgaaatttt---------tcccatgtcataatccactgacgtttttgagaagtagaagtttttttaatgatacatggtgatgtcat-tggaaattgcatcccatgccataggtgcccattcacacaacattaagaattacttttt--cgttcatcttt--------tcacatgtctg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176001559 628 + 178775436 CGTGACGCCTGCAG-CATGCCCTCCATCTGATTG-TGTTTAGT-TTCCTTCGTGATCTCTCTGGGTAACTAACTACCGCTTCTGGGGCAGGTGGCATGATGGCTTCCTTTGCTGGGCTGTGCTCCGTGACTTGAGATATGGCAGAATTC------TTTATCGCAGATGCCCAACTATTAGTTGACCTCGAATATAAAACACTCT----TGATG--AGAAGTtcctgaa---------gtttttttctttttttgggccATCTTGAACATATGAATATTGAGATTTAGATAAAATAGTCAATACAttgaatta-attta--------atatttaacaaattttgttgtatccata-atttaaaattcCTTTATTATCTAAGATAACACTTGAACAGTAttt-ttttCGACTTCTAACTTTGGTGAAACAATTTAGTTCAGCTCATCATGTGTGTCTCTAAATAGGGGATCTGCGTCATCACCAGAACTGC--TTTTT--------GAGCTCTC----------------------------------------------------------CCTA------------------------TGAAATTTT---------TCCCACATCATAATCCACTGACGTTTTTGAGAAGTAGAAGtttttttAATGATACATGGTGATGTCAT-TGGAAATTGCATCCCATGCCATAGGTGCCCATTCACACAACATTAAGAATTacttttt--cattcatcttt--------tcacATGTCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132844629 628 + 135778131 TGTGGCGCCTGCAG-CATGCCCTCCATCTGATTG-TGTTTAGT-TTCCTTCGTGATCTCTCTGGGTAACTAACTACCGCTTCTGGGGCAGGTGGTATGATGGCTTCCTTTGCTGGGCTGTGCTCCGTGACTTGAGATATGGCAGAATTC------TTTAGTGCAGatgcccaactgttagttgacctcgaatataaaacactct----tgatg--agaagttcctgaa---------gtttttttctttttttgggccatcttgaacatatgaatattgagatttagataaaatagtcaatacattgaatta-attta--------atatttaacaaattttgttgtatccata-atttaaaattcctttattatctaagataacacttgaacagtattt-ttttcgacttctaactttggtaaaacaatttagttcagctcatcacatgtgtctctaaataggggatctgcgtcatcaccagaactgc--ttttt--------gagctctc----------------------------------------------------------ccta------------------------tgaaatttt---------tcccacgtcataatccactgatgtttttgagaagtagaagtttttttaatgatacatggtgatgtcac-tggaaattgcatcccgtgccataggtgcccattcacacaacattaagaattacttttt--cattcatcttt--------tcacatgtctg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188229392 615 - 190850796 CTTGAAACCTGCAG-CCTGCCC-CTGTCTGAT---CGTTTAGT-CTCCTTCATGAGA---ATAGGTAACTAACTACTGCTTCTGGGGCAGATGGCCCGATGGCTTCCTTTGCTGGGCTCTGCTCCGTGACATGAGATGTGGCAGAAATTTGGAGATTTAGTGCAGatgcccaaatattagctgacctcgaatataaaacatcatcatatgatg--agaaattcctgaa----------tttttttctttttttaggacatcttgaacatttgaatattgagatttagataa-----tcaatacat----------tta--------atatttaataaatttagt--tatctatc-atttaaaattcctttattatctaatataataattgaacaac-ttt-ttttcgacttctaacttcggtaaaacaattcagttcagctcgtcacgtgcatctataaacaggggctcttcattgtcaccagaactac--ttttt-------ggagctctcg---------------------------------------------------------ccta------------------------tgaaattct---------tcccacctcataatccattgatttttttgagaaatagtagttttttc-atgagacgtgatgatgtcat-tggaaattgaatgccatgctgtaggtggccactcacacagtgttaacaattacgtttt--cattcatcttT--------TTACATGTCCG i calJac3.chr3 C 0 C 0 s mm10.chr8 84711450 740 - 129401213 TTTGAAACTTGCGG-AATGTTCTACACTTTATTGACATACATC-TTTCTTCATCACGGCCCAGGGTA----AGCATTGTTTCTGGGGCAGGTGGCACTCAGGCTTCTTTTGCTGTTCTGTACTCCATCACCTCAGGTATGGCAGAGAA-------TTTAGTGCAGatgcccaaatattagctgacctcgaatctatggtacatc----cagtgctaaaagatcttggatgtgtgtgtgtttgtgtgtttgtgtgtgtgtatgtgtgtgtgtgagtg-tgtgacttgtactgaac-----atacagatatttacatctatgctaaacatatttaatatgtttagttacatgtatgtatttaaaatctcatatttaaatgatacaccaattgagcagtatttatgtttccctttcagcggttgcaaagtagt----tttagcttataatattcgcctttagattg-tgatcttcatcatcactagaactataatttttCCCCAAATGGGGTctctggttggcttcaaattcataatccccatcttcttgcatcagtctccagaaggctggaccctgcagtgtgcgccaccatgctcagctTGAGGTTTTTAGTGGCTATCTCCTGTCATGTT---TTGCGTGTTTTCAGAGACCGTAACTTTTGG-ATTATATAACATGTTGCCTT-ATGAACTGTTATTCAACCCTATGG--ACCCCCTTACAGAACCGGAAGACTTATCTTTTGCTACTCATCTTTCATCTGTCCTACAtttaca i mm10.chr8 C 0 C 0 s canFam3.chr16 15720689 604 - 59632846 TGGGAAGCCTGCAGAAAGGTCCGACACCTGACTG-TGTTTACTCTTCCTTCATGATAACTCAGAGTA----ACTGCTGCTTCTAGGGCAGATGGCATGATAGCTCATTTTGCTGGGCTGAACTCCATAACTTGGTACATGGCAGAGATTTAGAGATTTACTACAGatgcccaaatatttgttgctcttgaatacaaagcattgt----ttatg--agaagatccttga---------atttttt------------ctaccctgaacaaatgaacatt-----tgaggttaaataatcaactaactaaa--------a--------atatttaatagatttagttcttgccacacattttaaatcccattattacccaatataataattgagcagtattt-tttcc-acctctaacttctgtaaaataatttaattcaccttgtcacatggatctttaaatgttagactttcatcatcactagacctac--ttttt--------gacctcttt---------------------------------------------------------cctc------------------------tcaaatatt-----------ctgtgtcattttccttc--cctttttgaggagtggta--tttttgaattatatatgatgttattacatggaaattttattccatgccacaagtgcccattcacataagattaagaattgttattt--ttttcCATtgt--------gtgtgtgtgtg i canFam3.chr16 C 0 I 527 a score=1242245.000000 s hg38.chr4_KI270785v1_alt 37146 369 + 119912 TTTGCA------ACATTcacttacatgtgtgaggttaaatatctggaggaataatgattataatgatt-----atatctgtt-tagcgaattctgaagggtgacttttataagcaacaatcaactagcaaagactgaggtcatttc---ag---gatttgtctttcataagccat-attttgttgttcataataaagtatctaagatggcatcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgTTTCAGATGAAAAACTCCCACCTTAATGTTTGAATATGCAAAATATGTAATTGTATA-TTTTTCTATTTTGATTCATT-AATGTTATTATGAGACTT----TCACTTGGCTTT s panTro4.chr4 190309578 370 + 193495092 tttgca------acattcacttatatgtgtgaggttaaatatctcaaggaataatgattataatgatt-----atatctgtt-tagcgaattctgaagggtgacttttataagcaacaatcaactagcaaagactgaggtcatttc---ag---gatttgtctttcataagccat-attttgttgttcacaataaagtaactaagatggcatccttcaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgTTTCAGATGAAAAACTCCCACCTTAATATTTGAATATGCAAAATATGTAATTGTATA-TTTTTCTATTTTGATTCATTAAATGTTATTATGAGACTT----ACACTTGGCTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276082 370 + 198332218 tttgca------acattcacttatatgtgtgaggttaaatatctcgaggaataatgattataatgatt-----atatctgtt-tagtgaattctgaagggtgacttttataagcaacaatcaactagcaaagactgaggtcatttc---ag---gatttgcctttcataaaccat-attttgttgttcataataaagtaactaagatggcatcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgTTTCAGATGAAAAACTCCCACCTTAATATTTGAATATGCCAAATATGTAATTGTATA-TTTTTCTATTTTGATTTATTAGATGTTATTATGAGACTT----ACACTTGGCTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247172 370 + 115148730 tttgca------atattcacttatatgtgtgaggttaaatatctggaggaataatgattataatgatt-----atatctgtt-tagcgaattctgaagggtgacttttataagcaacaatcaactagcaaagactgaggtcatttc---ag---gatttgtctttcataaaccat-attttgttgttcataataaagtaattaagatggcatcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttagtattttctgaggtacatttttgTTTCAGATGAAAAACTCCCACCTTAATATTTTAATATGCAAAATACATAATTGTATA-TTTTTCTATTTTGATTCACTAGATGTTATTATGAGACTT----ACACTTGGCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181049989 371 + 184069350 tttgca------acattcacttttatttgtgaggttaagtatctctaggaataatgattataatgatt-----acatctgtt-tagcgaattctgaagggtgacttttataagcaacagtcgactagcaaagactgatgtcatttc---ag---gatttgtctttcataaaccat-attttgttgttcataataaagtaattacgatggcgtcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgtttcagatgaaaaacttccaccttaatatttgaacatGCAAAATATGTAATAGTATATTTTTTCTATTTTGATTCATTAGATGTTATTATGAGACTT----ACACTTGGCTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186387257 371 + 189454096 tttgca------acattcacttttatttgtgaggttaaatatctctaggaataatgattataatgatt-----acatctgtt-tagcgaattctgaagggtgacttttataagcaacagtcgactagcaaagactgatgtcatttc---ag---gatttgtctttcataaaccat-attttgttgttcataataaagtaattaagatggcgtcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgtttcagatgaaaaacttccaccttaatatttgaacgtGCAAAATATGTAATAGTATATTTTTTCTATTTTGATTCATTAGATGTTATTATGAGACTT----ACACTTGGCTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176002187 371 + 178775436 TTTGCA------ACATTCACTTTTATTTGTGAGGTTAAATATCTCTAGGAATAATGATTATAATGATT-----ACATCTGTT-TAGCAAATTCTGAAGGGTGACTTTTATAAGCAACAGTCGACTAGCAAAGACTGGTGTCATTTC---AG---GATTTGTCTTTCATAAACCAT-ATTTTGTTGTTCATAATAAAGTAATTAAGATGGCGTCCTTTAAGGTAAATCATTTTGTAAGATCACAAATGGAAGACAA-TTACTCTTTTCTGAGGTACATTTTTGTTTCAGATGAAAAACTTCCACCTTAATATTTGAACATGCAAAATATGTAAtagtatattttttctattttgattcaTTAGATGTTATTATGAGACTT----ACACTTGGCTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132845257 370 + 135778131 tttgca------acattcacttttatttgtgaggttaaatatctctaggaataatgattataatgatt-----acatctgtt-tagcaaattctgaagggtgacttttataagcaacagtcgactagcaaagactgatgtcatttc---ag---gatttgtctttcataaaccat-attttgttgttcataataaagtaattaagatggcgtcctttaaggtaaatcattttgtaagatcacaaatggaagacaa-ttactcttttctgaggtacatttttgtttcagatgaaaaactcccaccttaatatttgaacatGCAAAATATGTAATAGTATA-TTTTTCTATTTTGATTCATTTGATGTTATTATGAGACTT----ACACTTGACTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188230007 364 - 190850796 TTTGaatgaaatacattcacttgtatttgtcaggttaaatacctccaggaataatgattat--------------atctgtt-tagcaaattctgaaggggaacttttataagcaacaatcgaccagcaaagactgaggtcatttc---ag---ggtctgtctttcagaaaccatggttttattgttcattataaagtcactgagatggcttcctttgaggtaagtcattttgtaagaccacaaatggaagacaatttgctcttttctgaggtacatttttgtttcaggtgaaaaactctgaccttaacatttgaacatGCAAAATATGTAGT--CATG-TTTTTCTGTTTTGATTCATTAGA---TATTAGGAGACCT----GTACTTGGCTTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84712190 339 - 129401213 ttcata------atcattgcttgtaagtttgacgtcatttacttctagtaatgacagctacagctgtcc---aaagtctcttaaaggaaactctgaagggcaacatctct----aatggcgagctacctgtcattggggtcactgc---agtaaaatttgtttttcataaatcaa-attttgttcttcataatacaatagtcaagacagcatc----------gctgattctaaaagatcataaagatgagggat---------------------tctgtactttaaaggaaaacttctcaacttaatatctgagcatatacagTGCCT----GTATA-CTTGTCTCTTTTGTATTATT---TGGAATTATGATTCTTCGAACAACgtggttct i mm10.chr8 C 0 I 188 s canFam3.chr16 15721820 341 - 59632846 tttaca------atgttcacttgtaatt----agtcatttatctccaggaataaggattataactattcaaaaagatctctt-taataaattctgcaaattgacttccataaactcaaa--agctagcaggagtagaggtcatttcaatag---aatttgtctgccataaacc-t-attttg-tgttcataataaagtaatgaagatagcatcctctaaGTTAAGTGAT---------------------------GTTCTCTTTTCTG-GGTACAATTTT--TTTAGAGAAAAATCTATGACTTTAATGTTTGGGTGCACAAAGTATGTAACTGTATA-ATTATCTAATTTGGCTCATTAGGTGTTATTTTAAAGCTT----ATACTTGGCTTA i canFam3.chr16 I 527 C 0 a score=298414.000000 s hg38.chr4_KI270785v1_alt 37515 98 + 119912 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGAAAAATCGGATATAATAGTTGAAAACTGGGCTAAGAAAAGA--------TTTT----AATTCT s panTro4.chr4 190309948 104 + 193495092 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGAAAAATCGGATATAATAGTTGAAAACTGGGCTAAGAAAAGA--TTTTCTTTTT----AATTCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276452 104 + 198332218 ACTCTGA-------------------TAACTCATTTATTACCCGACTAT-AACTAGGATACACTAAGAAAAATTGGGTATAATAGTTGAAAACTGGGCTAAGAAAAGA--TTTTTTTTTT----AATTCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247542 104 + 115148730 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGAAAAATCGGATATAATAGTTGAAAACTGGGCTAAGAAAATA--TATTTTTTTA----AATTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181050360 104 + 184069350 ACTCTGA-------------------TAACTCATTTATTATCTGACTATAAAATAGGATACACT--GACAAATCGGATATAATAGTTGAAAACTGCATTAAGAAAAGA--TTTTTTTTTT---AAATTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186387628 105 + 189454096 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGACAAATCGGATATAATAGTTGAAAACTGCATTAAGAAAAGA--TTTTTTTTTT---AAATTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176002558 105 + 178775436 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGACAAATCAGATATAATAGTTAAAAACTGCattaagaaaaga--tttttttttt---taatttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132845627 104 + 135778131 ACTCTGA-------------------TAACTCATTTATTACCTGACTAT-AACTAGGATACACTAAGAAAAATCAGATATAATAGTTGAAAACTGTGTTAAGAAAAGA--TTTTTTTTTT----AATTCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188230371 103 - 190850796 ACTCTGA------------------TTAACTGATTTATGACCTGACTGT-AACTTAGGCACACTAA-ATAAATATGATCTAATGGTTGACAACTGGGTTAAGATAGGA-------TTTTTAAAAAATTCT i calJac3.chr3 C 0 C 0 s mm10.chr8 84712717 124 - 129401213 actccgaagattgagaaccaTGGATCTAACCTATTTACTACTTGATTGC-AGTTCAGATACACTGAAAGTAATCTGAAAGGAT--TTGGAAGCTAGTTTAAGAAAATAACTTTTTTTTTT---AAAGGTC i mm10.chr8 I 188 C 0 s canFam3.chr16 15722161 82 - 59632846 --------------------------------------TACCTGGCTAT-AACTTGGATACCCTGAGAAGAATCTAGTATTATAGTTGGAAACTGGCTTAAGAATATA-----Catatat----aatttt i canFam3.chr16 C 0 I 382 a score=537350.000000 s hg38.chr4_KI270785v1_alt 37613 146 + 119912 AAGCTCAGTTAAGTTTTGCTAAAATAGTTCATTGAAA-GCTACTAACTGGATTCGCCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAAGGCTTTTATTTATTTCTTAAATAAAAGATTCCTGAAGAATGCCCACACAAGAGAAA s panTro4.chr4 190310052 146 + 193495092 AAGCTCAGTTAAGCTTTGCTAAAATAATTCATTGAAA-GCTACTAACTGGATTCGCCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAAGGCTTTTATTTATTTCTTAAATAAAAGATTCCTGAAGAATGCCCACACAAGAGAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276556 146 + 198332218 AAGCTCAGTTAAGTTTTGCTAAAATAATTCATTGAAA-GCTACTAACTGGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---GAGAAGGGTTTTATTTGTTTCTTAAATAAAAGATTCCTGAAGAATGCCCACATGAGAGAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247646 146 + 115148730 AAGCTCATTTAAGTTTTGCTAAAATAATTCATTGAAA-ACTACTAACCAGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAAGGTTTTTATTTATTTCTTAAATAAAAGATTCCTGAAGAATGCCCACACGAGAGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181050464 146 + 184069350 AAGCTCAGTTAAGTTTTGCTAAAATAATTCATTGAAA-GCTACTAACTAGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAAGGTTTTTATTTATTTCTTAAATAAAAGATTCCTGAAGAATGCCCACACTGGAGAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186387733 146 + 189454096 AAGCTCAGTTAAGTTTTGCTAAAATAATTCATTGAAA-GCTACTAACTAGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAAGGTTTTTATTTATTTCTTAAATAAAAGATTCCTGAAGAATGCCCACACTGGAGAAA i macFas5.chr5 C 0 I 3 s papAnu2.chr5 176002663 146 + 178775436 aagctcAGTTAAGTTTTGCTAAAATAATTCATTGAAA-GCTACTAACTAGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---gaaaaggtttttatttatttcttaaataaaagattCCTGAAGAATGCCCACACTGGAGAAA i papAnu2.chr5 C 0 I 3 s chlSab2.chr7 132845731 146 + 135778131 AAGCTCAGTTAAGTTTTGCTAAAATAATTCATTGAAA-GCTACTAACTAGATTCACCCTAGTTCCTGTTCCAATATCTAAACTATA---GAAAACGTTTTTATTTATTTCTTAAGTAAAAGATTCCTGAAGAATGCCCACACTGGAGAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188230474 145 - 190850796 AAGCTCAGTTAAGTTTTGCTAGAATAAGTCATTGAAA-GCTACTAACTAGATTCACCCTAGTTCCTGTTCCAATATCTAAGCCATA---GAAAAGGTTTTTATTTATTTCATAAA-AAAAGATTCCTGAAGAACGCCCACATGGGAGAAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84712841 140 - 129401213 AAGCTCAGTTAAATTTTAATTGAAATTTTCTTTAAAATGTTATTCATT-GATATAGTCTGGTTCCTTTTCCAGGCCCTAAAGTATAAGGGAAAAGGTACTTA-----TTCTTAAACCCAAG----CTGACTAATACCCACAGGAGAGACA i mm10.chr8 C 0 C 0 s canFam3.chr16 15722625 133 - 59632846 AAACTCAGTCCAATTTTACCTAAATAATTTTTTGAAAAGCTATTACTTCGATTCATCCTAGGCCCTATTCCCATCCCTAGACTG-A---GGAAAGACTCTTACTTATTCC-------------CCCTGAATAGTACCCACATGGGGGAAA i canFam3.chr16 I 382 C 0 a score=3425.000000 s hg38.chr4_KI270785v1_alt 37759 3 + 119912 CCA s panTro4.chr4 190310198 3 + 193495092 CCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276702 3 + 198332218 CCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247792 3 + 115148730 CCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181050610 3 + 184069350 CCA i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132845877 3 + 135778131 CCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188230619 1 - 190850796 -T- i calJac3.chr3 C 0 C 0 s mm10.chr8 84712981 3 - 129401213 CCA i mm10.chr8 C 0 C 0 s canFam3.chr16 15722758 3 - 59632846 CTA i canFam3.chr16 C 0 C 0 e papAnu2.chr5 176002809 3 + 178775436 I e macFas5.chr5 186387879 3 + 189454096 I a score=34245.000000 s hg38.chr4_KI270785v1_alt 37762 41 + 119912 CAGAGCCCAGATTCTCCCTTTGTATGAACTCATCCTGAAAC s panTro4.chr4 190310201 30 + 193495092 CAGAGCCCAGATTCTCTCTTTGTATGAAGT----------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276705 30 + 198332218 CAGAACCCAGATTCTCCCTTTGCATGAACT----------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247795 41 + 115148730 CAGAGCCCACATTCTCCCTTTGTATGAACTCATCCTGAAAC i nomLeu3.chr7b C 0 T 43 s rheMac3.chr5 181050613 8 + 184069350 CAGAGCCC--------------------------------- i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176002812 41 + 178775436 CAGGGCCCGGATTCTCCCTTTGTATGAGCTCATTCTGAAAC i papAnu2.chr5 I 3 C 0 s chlSab2.chr7 132845880 12 + 135778131 CAGAGCCCGGAT----------------------------- i chlSab2.chr7 C 0 C 0 s mm10.chr8 84712984 41 - 129401213 CAGAGCCCAGGTGTTCTGCTGGTATGACCTCATCCCCAATC i mm10.chr8 C 0 C 0 s canFam3.chr16 15722761 41 - 59632846 CAGAGCCCAGGTGCCTCATTTGTATGACTTCATCCTAAAAT i canFam3.chr16 C 0 C 0 e calJac3.chr3 188230620 0 - 190850796 C e macFas5.chr5 186387879 3 + 189454096 I a score=-969.000000 s hg38.chr4_KI270785v1_alt 37803 2 + 119912 CA s nomLeu3.chr7b 111247793 2 + 115148730 CA i nomLeu3.chr7b T 43 C 0 s papAnu2.chr5 176002853 2 + 178775436 CA i papAnu2.chr5 C 0 C 0 s mm10.chr8 84713025 1 - 129401213 T- i mm10.chr8 C 0 C 0 s canFam3.chr16 15722802 2 - 59632846 TA i canFam3.chr16 C 0 C 0 e calJac3.chr3 188230620 0 - 190850796 C e chlSab2.chr7 132845892 0 + 135778131 C e macFas5.chr5 186387879 3 + 189454096 I e rheMac3.chr5 181050621 0 + 184069350 C e ponAbe2.chr4 195276735 0 + 198332218 C e panTro4.chr4 190310231 0 + 193495092 C a score=-174.000000 s hg38.chr4_KI270785v1_alt 37805 2 + 119912 CA s nomLeu3.chr7b 111247795 2 + 115148730 CA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186387882 2 + 189454096 CA i macFas5.chr5 I 3 C 0 s papAnu2.chr5 176002855 2 + 178775436 CA i papAnu2.chr5 C 0 T 43 s canFam3.chr16 15722804 1 - 59632846 C- i canFam3.chr16 C 0 C 0 e mm10.chr8 84713026 0 - 129401213 C e calJac3.chr3 188230620 0 - 190850796 C e chlSab2.chr7 132845892 0 + 135778131 C e rheMac3.chr5 181050621 0 + 184069350 C e ponAbe2.chr4 195276735 0 + 198332218 C e panTro4.chr4 190310231 0 + 193495092 C a score=16142.000000 s hg38.chr4_KI270785v1_alt 37807 34 + 119912 GAGCCCAGATTCTCCCTTTGTTTGAACTCATCCT s nomLeu3.chr7b 111247797 34 + 115148730 GAGCCCACATTCTCCCTTTGTATGAACTCATCCT i nomLeu3.chr7b C 0 T 43 s macFas5.chr5 186387884 34 + 189454096 GAGCCCACATTCTCCCTTTGTATGAGCTCATTCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176002814 34 + 178775436 GGGCCCGGATTCTCCCTTTGTATGAGCTCATTCT i papAnu2.chr5 T 43 C 0 e canFam3.chr16 15722805 0 - 59632846 C e mm10.chr8 84713026 0 - 129401213 C e calJac3.chr3 188230620 0 - 190850796 C e chlSab2.chr7 132845892 0 + 135778131 C e rheMac3.chr5 181050621 0 + 184069350 C e ponAbe2.chr4 195276735 0 + 198332218 C e panTro4.chr4 190310231 0 + 193495092 C a score=2238.000000 s hg38.chr4_KI270785v1_alt 37841 4 + 119912 GAAA s nomLeu3.chr7b 111247788 4 + 115148730 GAAA i nomLeu3.chr7b T 43 C 0 s macFas5.chr5 186387918 4 + 189454096 GAAA i macFas5.chr5 C 0 T 43 s papAnu2.chr5 176002848 4 + 178775436 GAAA i papAnu2.chr5 C 0 T 43 e canFam3.chr16 15722805 0 - 59632846 C e mm10.chr8 84713026 0 - 129401213 C e calJac3.chr3 188230620 0 - 190850796 C e chlSab2.chr7 132845892 0 + 135778131 C e rheMac3.chr5 181050621 0 + 184069350 C e ponAbe2.chr4 195276735 0 + 198332218 C e panTro4.chr4 190310231 0 + 193495092 C a score=4045814.000000 s hg38.chr4_KI270785v1_alt 37845 1174 + 119912 CCACAGAGCCCAGATTCTCCCTTTGTTTGAACTCATCCTGAAACCACACATTTACTCCCAGAGAGGTAACAATATGTTTCTGCAATGATATGCAGGTTAAAAAAAAGCTTTCAGGAC-AAAAAAAGAAATGAAT-AAAAAATCAAGCCAAAACACATGGATTCCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAATATTTCCTGAGCAATTTTGCTGATCTTATGATGTGTATCTCACAGCCATTTCCATAAAA-AAATGCAAGTGAGTCAGG-----ATGAAAGAGACTTCCacctggacttcaacgt---ctccagcatttactacctgggtgatcttgaacaagtcacagtttcttttcaattttccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAACAAATATGTAGGAAAACATACTCAGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAAC-TTGCTGATGATTTAGTGATTATTACTGCTGTCTTCAATTGCCAGTAATT--TATTTCTACTATCTTGATGGTAAAGGCGTGA-TTTTTT-----TTTTTTTTTGAGGGGCTGCAATAGTATTCTCT--------ATTTA---------TAATTTGGGAAAAATTA-----CAAATGTTTTTGC-TTTCAAAATCTGGAATAACAGAGGCCAGGAATTGATAGGCCATTTTAGACTTTTTCCAAGTGGAGTTCTTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTTCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTTTATTTAGGTGGGCCTACGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTCGTGTACTGAGACttctggacaagacagcacactagcttggg--------agtctgacccccttccttaaactca--acc-tgaaatgctacataagcaactgggaGAATGACTGCTAACAGAATCAGTACAGCTCTTGCGGTAGCAGAAGG-TGTTAGGTGATTTTCTGGGA----GAGAGCA-----GCCCATACCCGAAGAGAACCAGCTGTCACTAATGAGGGGACACTGTGGGAAGGAGCTTTCTAGTTGTCCTAAGGTTTTCATCCTTCGTTGCCTCGGAGGGAGCATTGTTTTCCCCCAT----CCCTGCAGGTGGGGACACACAGC s panTro4.chr4 190310231 1135 + 193495092 ---------------------------------CATCCTGAAACCACACATTTACTCCCAGAGAGGTAACAATATGTTTCTGCAATGATATGCAGGTTAAAAAAAAGCTTTCAGGAC-AAAAAAAGAAATGAAT-AAAAAATCAAGCCAAAACACATGGATTCCAGGTGTGCATCC--GAGACAGCTTTTTGACAGATGTAAATATTTCCTGAGCAATTTTGCTGATCTTATGATGTGTATCTCACAGCCATTTCCATAACA-AAATGCAAGTGAGTCAGG-----ATGAAAGACACTTCCacctggacttcaacgt---ctccagcatttactacctgggtgatcttggacaagtcacagtttcttttcaatttcccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAACAAATATGTAGGAAAACATACTCAGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAAC-TTGCTGATGATTTAGTGATTATTACTGCTGTCTTCAATTGCCAGTAATT--TATTTCTACTATCTTGATGGTAAAGGCGTGA------------TTTTTTTTTGAGGGGCTGCAATAGTATTCTCT--------ATTTA---------TAATTTGGGAAAAGTTA-----CAAATGTTTTTGC-TTTCAAAATCCGGAATAATGGAGGCCAGGAATTGATAGGCCATTTTAGACTTTTTCCAAGTGGAGTTGTTCG-TGATCCAGTTTTCAGTGGATTTGGGGATAAATAC-GTTTCCCTCCGGGTTGTGGAGTGCTTTATTTCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTTTATTTAGGTGGGCCTACGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTCGTGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------AGTCTGACCCCCTTCCTTAAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGAATGACTGCTAACAGAATCAGTACAGCTCTTGCGGTAACAGAAGG-TGTTAGGTGATTTTCTGGGA----GAGAGCA-----GCCCATACCCGAAGAGAACCAGCTGTCACTAATGAGGGGACACTGTGGGAAGCAGCTTTCTAGTTGTCCTAAGGTTTTCATCCTTCGTTGCCTCGGAGGGAGCATTGTTTTCCCCCAT----CCCTGCAGGTGGGGACACACAGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195276735 1142 + 198332218 ---------------------------------CATCCTGAAACCACACATTTACTCCCAGAGAGGTAACAATATGTTTCTGCAATGATATGTAGGTTGAAAAAAAGCTTTCAGGACAAAAAAAAGAAATGAAT-AAAAAATCAAGCCAAAACACATGGATTCCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAATATTTCCTGAGCAATTTTGCTGATCTTATGATGTGTATCTCACAGCCATTTCCATAACA-AAATGCAAGGGAGTCAGG-----ATGAAAGAGACTTCCacctggacttcagcgt---ctccagcatttactacctgggtgatcttggacaagtcacaatttcttttcaattttccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAACAAATATGTAGGAAAACATACTCAGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAACTTTGCTGACGATTTAGTGATTATTACTCTTGTCTTCAATTGCCAGTAATT--TATTTCTACTATGTTGATGGTAAAGGTGTGATTTTTTT-----TTTTTTTTTGAGGGGCTGCAATGGTATTCTGT--------ATTTA---------TAATTTGGGAGAAATTA-----CAAATGCTTTTGC-TTTCAAAACCTGGAATAACGGAGGCCAGGAATTGATAGGACATTTTAGACTTTTTCCAAGTGGAGTTGTTCC-TGGTCCAGTTTTCAGCGGATTTGGGGATAAATAA-GTTTCCCTCCAGGCTGTGGAGTGCTTTATTTCCTGGAACTTTTTCACATGAAGTCATCACTTGTTGTTTATTTAGGTGGGCCCATGGCCACATT------TGAATCAGATC--CGTGTAAAC--TGACTCGTGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------AGCCTGACCCCCTTCCTTAAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATCAGTACAGCTCTTGCCGTAACAGAAGG-TGTTAGGTGATTTTCTGGGA----GAGAGCA-----GCCCATACCCGAAGAGAACCAGCTGTCACTAATGAGGGGACACTGTGGGAAGTAGCTTTCTAGTTGTCCTAAGGTTTTCATCCTTCGTTGCCTTGGAGGGAGCATTGTTTTCCCCCAT----CCCTGCAGGTGGGGACACACTGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111247792 1171 + 115148730 CCACAGAGCCCACATTCTCCCTTTGTATGAACTCATCCTGAAACCACACATttactcccagagaggtaacaatatgtttctgcaatgatatgtaggttaaaaaaaagcttGCAGGAC-AAAGAAAGAAATGAAT-AAAAAATCAAGCCAAAACACATGGATTCCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAATATTTCCTGAGCAATTTTGCTGATCTTATGATGTGTATCTCACAGCCATTTCCATAACA-AAATGCAAGTGAGTCAGG-----ATGAAAGACACTTCCACCTGGACGTCAACGT---ctccagcatttactacctgggtgatcttggacaagtcacaatttcttttcaattttccttatctCCAAGGATGC----TTCTCAGGCTGACTGCCAAAATATATGTAGGAAAACATACTCAGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAACTTTGCTGATGATTTAGTGATTGTTACTCCTGTCTTCAATTGCCAGTAATT--TATTTCTACTATCTTGATGGTAAAGGCGTGA------T-----TTTTTTTTTGAGGGGCTGCAATAGTATTCTGT--------ATTTA---------TAATTTGGGAAAAATCA-----CAAATGCTTTTGC-TTTCAAAATCTGGAATAACGGAGGCCAGGAATTCATAGGCCATTTTAGACTTTTTCCGAGTGCAGTTGTTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTTCCTGGAACTTTTTCACA-----TCATCACTTGTTCTTTATTTAGGTGGGCCTATGGCCACACTGACATGTGAATCAGATC--AGTGTAAACTTTGACTCGTGTAGTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------AGCCTGACCCCCTTCCTTAAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATCAGTACAGCTCTCATGGTAACAGAAGG-TGTTAGGTGATTTTCTGGGA----GCGAGCA-----GCCCACACCCGAAGAGAACCAGCTGTCACTAATGAGGGGACACTGTGGGAAGGAGCTTTCTAGTTGTCCTAAGGTTTTCATCCTTCGTTGCCTTGGAGGGAGCATTGTTTTCCCCCAT----CCCTGCAGGTGGGGACACACAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181050621 1169 + 184069350 -----------ACATTCTCCCTTTGTATGAGCTCATTCTGAAACCACACATttactcccagagaggtagcaatgtgtttctgcaatgatatgtaggttaaaaaaag--tttcagGAC-AA-AAAAGAAATGAATAAAAAAATCAAGCCAAAACACATGGATTTCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAGTATTTCCTGAGCAATTTTGCTGATCTTGTGATGTGTATCTCACAGTCATTTCCATAACA-AAATGCAAGTGAGTCAGG-----ATGGAAGAGAGTTCCCcctggacttcagcgt---ctccagcgtttactacctgggcgatcttggacaagtcacaatttcttttcaattttccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAA-AAGTCTGTAGGAAAACATACTCCGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAATT---ATAAAACTTCACTGATGATTTAGTGATTATTACTCCTGTCTTCAATTGCCAGTAATT--TATTTCTACTGTCTTGATGGTAAAGGCATGA-TTTTTTGTTTGTTTGTTTTTGACGGGCTGCAATAGTATTGTGT--------ATTTA---------TAATTTGGGGGAAATTA-----CAAATGCTTTTAC-TTTCAAATTCTGGAATAATGGAGACCAGGAATTGATAGGCCATTTTAGACTTTCTCCAAGTGGAGCTGTTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTCCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTCTATTTATGTGGGCCTATGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTTATGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------GGTCTGACCCCCTTCCTTCAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATTAGTGCAACTCTTGTGGTAACAGACGG-TGTTAGGTCATTTTCTGGGA----GAAAGCG--AAGGCCCATACTCAAAGAGAACCAGCTATCACCAATGAGGGGACACTGTGGGAAGCAGCTTTCTAGTTGTCCTAAGATTTTCATCCTTCGTTGCCTTGGAGGGAACATTGTTTTCCCCCAT----CTCTGCGGGTGGGGACACACAGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186387879 1180 + 189454096 CCACAGAGCCCACATTCTCCCTTTGTATGAGCTCATTCTGAAACCACACATttactcccagagaggtagcaatgtgtttctgcaatgatatgtaggttaaaaaaag--tttcagGAC-AA-AAAAGAAATGAATAAAAAAATCAAGCCAAAACACATGGATTTCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAGTATTTCCTGAGCAATTTTGCTGATCTTGTGATGTGTATCTCACAGTCATTTCCATAACA-AAATGCAAGTGAGTCAGG-----ATGGAAGAGAGTTCCCcctggacttcagcgt---ctccagcgtttactacctgggtgatcttggacaagtcacaatttcttttcaattttccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAA-AAGTCTGTAGGAAAACATACTCCGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAACTTCACTGATGATTTAGTGATTATTACTCCTGTCTTCAATTGCCAGTAATT--TATTTCTACTGTCTTGATGGTAAAGGCATGA-TTTTTTGTTTGTTTGTTTTTGACGGGCTGCAATAGTATTGTGT--------ATTTA---------TAATTTGGGGGAAATTA-----CAAATGCTTTTAC-TTTCAAATTCTGGAATAATGGAGACCAGGAATTGATAGGCCATTTTAGACTTTCTCCAAGTGGAGCTGTTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTCCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTCTATTTATGTGGGCCTATGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTTATGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------GGCCTGACCCCCTTCCTTCAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATTAGTGCAACTCTTGTGGTAACAGACGG-TGTTAGGTCATTTTCTGGGA----GAAAGCG--AAGGCCCATACTCAAAGAGAACCAGCTATCACCAATGAGGGGACACTGTGGGAAGCAGCTTTCTAGTTGTCCTAAGATTTTCATCCTTCGTTGCCTTGGAGGGAACATTGTTTTCCCCCAT----CTCTGCGGGTGGGGACACACAGC i macFas5.chr5 T 43 C 0 s papAnu2.chr5 176002809 1179 + 178775436 CCACAGGGCCCGGATTCTCCCTTTGTATGAGCTCATTCTGAAACCACACATTTACTCCCAGAGAGGTAGCAATGTGTTTCTGCAATGATATGTAGGTT-AAAAAAG--TTTCAGgac-aacaaaagaaatgaataaaaaaatcaagCCAAAACACATGGATTTCAGGTGTGCATCC--AAGACAGCTTTGTGACAGATGTAAGTATTTCCTGAGCAATTTTGCTGATCTTGTGATGTGTATCTCACAGTCATTTCCATAACA-AAATGCAAGTGAGTCACG-----ATGAAAGAGAGTTCCACCTGGACTTCAGCGT---CTCCAGCGTTTACTACCTgggtgatcttggacaagtcacaatttcttttcaattttccttATCTCTGAGGACGC----TTCTCAGGCTGACTGCCAA-AAATCTGTAGGAAAACATACTCTGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATtagtaaaagt---ataaaacttcaCTGATGATTTAGTGATTATTACTCCTGTCTTCAATTGCCAGTAATT--TATTTCTACTGTCTTGATGGTAAAggcatgc-ttttttgtttgtttgtttttgacggGCTGCAATAGTATTGTGT--------ATTta---------taatttgggggaaatta-----CAAATGCTTTTAC-TTTCAAATTCTGGAATAATGGAGACCAGGAATTGATAGGCCATTTTAGACTTTCTCCAAGTGGAGCTGTTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTCCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTCTATTTATGTGGGCCTATGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTTATGTACTGAGACTTCTGGGCGAGACAGCGCACTAGCTTGGG--------GGCCTGACTCCCTTCCTTCAACTCA--ACC-TGAAACGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATTAGTACAACTCTTGTGGTAACAGACGG-TGTTAGGTCATTTTCTGGGA----GAAAGCG--AAGGCCCATACTCAAAGAGAACCAGCTGTCACCAATGAGGGGACACTGTGGGAAGCAGCTTTCTAGTTGT-CTAAGATTTTCATCCTTCGTTGCCTTGGAGGGAGCATTGTTTTCCCCCAT----CTCTgcgggtggggacacacagc i papAnu2.chr5 T 43 C 0 s chlSab2.chr7 132845892 1167 + 135778131 ---------------TCTCCCTCTGTATGAGCTCATTCTGAAACCacacatgtactcccagagaggtagcaatatgtttctgcaatgatatgtaggttaaaaaaag--tttcagGAC-AAAAAAAGAAATGAATAAAAAAATCAAGCCAAAACACATGGATTTCAGGTGTGCATCC--AAGACAGCTTTTTGACAGATGTAAATATTTCCTGAGCAATTTTGCTGATCTTGTGATGTGTATCTCACAGTCATTTCCATAACA-AAATGCAAGTGAGTCAGG-----ATGAAAGAGAGTTCCacctggacttcagcgt---ctccagcgtttacaagctgggtgatcttggacaagtcacaatttcttttcaattttccttatctCTGAGGACGC----TTCTCAGGCTGACTGCCAA-AAATCTGTAGGAAAACATACTCCGTACAAAACATCTGCCTGGCACATAAACATTGGTTGAAACTGATTAGTAAAAGT---ATAAAACTTCACTGATGATTTAGTGATTATTACTCCTGTCTTCAATTGCCAGTAATT--TATTTCTACTGTCTTGATGGTAAAGGCATGATTTTTTTGTTTGTTTGTTTTTGACGGGCTGCAGTAGTATTCTGT--------ATTTA---------TAATTTGGGAAAAATTA-----CAAATGCTTTTAC-TTTCAAATTCTGGAATAATGGAGACCGGGAATTGATAGGCCATTTTAGACTTTCTCCAAGTGGAGCTGCTCC-TGGTCCAGTTTTCAGTGGATTTGGGGATAAATAA-GTTTCCCTCCAGGTTGTGGAGTGCTTTATTTCCTGGAACTTTTTCACATGAAGTCATCACTTGTTCTCTATTTATGTGGGCCTATGGCCACATT------TGAATCAGATC--AGTGTAAACTTTGACTTATGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGG--------AGCCTCACTCCCTTCCTTCAACTCA--ACC-TGAAATGCTACATAAGCAACTGGGAGGATGACTGCTAACAGAATTAGTACAACTCTTGTGGTAACAGAAGG-TGTTAGGTCATTTTCTGGGA----GAAAGCA--AAGGCCCATACTCAAAGAGAACCAGCTGTCACCAATGAGGGGACACTGTGGGAAGCAGCTTTCTAGTTGTCCTAAGATTTTCATCCTTCGTTGCCTTGGAGGGAACATTGTTTTCCCCCAT----CTCTGCAGGTGGGGACACACAGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188230620 1149 - 190850796 -CACAGAGCCCAGATGCTCCCTTTGCATGAA------CTGAAAGCACATGTTTACCCCCAGAGAGGCAGCAATATGTTTCTGCAGTGATATGTAGGTTAAAAAAAA-CTTTCAGGAC-AA-AAAATAAATGAAT-AAAACATCAAGCCAAAACACATAGATTCCAGGTGTGCATCCAAAAGACAGCTTTTTGACAGATATAAATATTTCCTGAGCAATTATGCTGATCTTATGATGTGTGTCTCAGAGTCATTTACACAGCA-AAATGCGAGAAAGTCAGG-----ATGAAAGAGAATTCCACCTGGACTTCA---T---ctccagcgtttactacctgggtgaccttggacaagccacaatttcttttcaactttctTTCTCTCTGACGACTC----TTCACAGGCTGACTGCCAA-AAATATGTAGGAAAACATACTCAGTATGAAATGTCTGCCTGGTACATAAACATTGGTTGAAACTAATTAGCAAAAGT---ATAAAACTTTGCTGATGATTTGGTGATTATGACTCCTGTCTTCAATTGCCAGCAATT--TATTTCTACCATCTTGATGGTAAAGGCATGA----------AGTTGTTTTCTGAGGAGGTGCAATAGTAGTCTGT--------ATTTA---------TAATTC-AGAAAAATTG-----CAAATTCTCTTGG-TTTCAAAATCTG--ATAGTGGAGACCAGGAATTGATAAGCCATTTTAGACTTTTTCCAAGTGGTGTTGTTCC-TGGTCTGGTTTTCAGTGGATTTGGGGATAAGTAA-GTTTCCCTCCAGGTTGTGGAGTGCTTGATTTCCTGGAACTTTGTCACATGAAGTCAACACGTGTTCTTTACTTACTTAGGCCTATGGCCATGTT------TGAGTCAGATG--AGTATAAACTTTGACTCATGTACTGAGACTTCTGGACAAGACAGCACACTAGCTTGGGAA------AGCCTGAGCCCCTTCCTTAAACTCA--ACC-TAAAATGCTACATAAGCAACTGAGAGGATGA-TGGTAACAGAATCAGTAC------------AACAAAGGA-TGTTAGGTCATTTTCTGGGA----GTGAGTG--GCAGCCCAGACCTGAAGAGAACCAGCTGTTGCTAGTAAGGGGACACTGTGGGAAGTAGCTTTCTACTTGCCCTAAGGTTTCCAGCCTATGTTGCCTTGGAGGGAGCACTGTTTTCCCCAGT----CCCTGCAGGTGAGGACACACAGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84713026 1116 - 129401213 ------------------------------------------ACCACATGTTTACCCCTGGAGAGGGAGCAATATGTTTCTGAAATAATTTGTCGGTTAAGAAAAA-CATTAAGGGG-AA------AAATGAAT-ATAATATTAGGCCAGAGCGCATGGATTCCAGGTGTGCATTC--AAGATAGCTGTTTGACAAATGTACGCATTTCCTGAGTAATTACGCTTAGCTT-TGGGTTGTATCGTAAAGTCATCCAAACAACA-GAATGCAGAGAAGGCAAT-----AC-AAAACGGGCGCCATCTGGATTTCCACCC---CTACCCCATTTACTACCTAAGTGACCTTGAAGAAGTCACAGTTGCTTTT-AACTTTCCTT-----CGAGAGTGC----TCCTCCCAAGGACAGCCAA-AGACACATGAGATGACCTCCTTAG--------AGGTTTCAGGAACTTCCATGGCAGTTGAAACTCATAAGCAAAAGTCTAATAAAACATTGCAAATGATTTAGTGATTATTAGTTAGGGCTTTCATTGCCAGAAATTGCCCCTCCCTCAATTTTGGTATTAA--GTATAG------------GCTTTTTAGGGTGGACTGAAATCGAACACAATGAAAAAGAATTGAAGTAGGAATTCAGTTAGAAAGAACTGAAAGCAAAAGACATTTGCTTTTCAAATTCGGGAATAACGGAAGTTACAAATCTAAGA--------AAGCTTTTTCGAACTGGGCTTTCCCCACGGTTCTATTTTCACTAGATATGGATATGTGCGATTTTTCTCCCTAAGTTGTGGGGTGTTTTAGCTCCTGAAAACTTTTCTCATTAAATCGT--CTTGTTCTTTATTTACTTGGGCCTATGGCCACGTC------TGGATGAGGAC--AGAGTAAATATTGACTCATGCAGTGAGCTTTCTGGACAA----------TAGCTGGAGCAGCTAGCATTTTAAAGCCTTTCCCTAAACTCAGGACC-----ACAGTACCTGAGCACCCAGG-GAGTGACCGGTAACTGAACCACAGCACCTCCTGTGGTTGCACAAGGAGGCGGGGTCCTTCTCAGAGAGGTGGACAGCA-----ACTC--ACTTGGAGTGAACCACGTGACACTAA-GAGCGTACGTGGTTGGAAAGAGCGTTCTAATTATCCCTTCCTCTGAATTCTAGACTAATTTCTACGAGTTACTGTGTTCCCAGTG----ACCTG--GGTAGGGGCACACAAC i mm10.chr8 C 0 C 0 s canFam3.chr16 15722805 1121 - 59632846 --------------------------------------------CACATGTTCACCCCCGGAGAGGTAACAATATGTTTCTAAAATACTATGCAGATTAAAAGAAAGCTTTCAGGGA-AA-----GAAATGAAT-AAAATATCAAGCCAAAGTGCATGGGTTCCAGGTGTACATCC--AAGATGGCT-TTTGACAGATGTAAATATTTCCTGAGAAATTTCCCT--TGTTATGATATGTATCTTAAGGTCATTTGTGCAACACAAATGCCAGTAAGTAAGGCAGTAAAAAAAGAGAATTccacctggattttagcctcaactccaacatttactacct-ggtgactttggacaagtcataacatctgttcaactttctttacctctaaggatgcttctttcttgaggtggtggccaa-aaacatataagacaatatacttgg--------aaatacctgacacataAATATCTGTTAAAACTTACTAATAAAAGC---ATAAAACTTTGTCAATAATTTAGTGATTATTAGTTCTATCTTTGATTGCCAATAATT--TATTTCAGCCAGTTTGACTGTAAGAGTATGG-GAT--------TTCTTTTTTGAGGGGCTGTATCAGTATTCCAT--------ATTGA---------TGATTTGGGAAAAATTA-----TAAATAGTTTTGC-TTTCAAAATGTGGAATCATGGAAACTAAGAAGTGTTAGGCCATGTCAGGCTTTTTCCAAGTGGAGCTTTTCCCTGGTCCAATTTTCATTGAAGATGGGGATTTATCA-ATTTACTCCCAAGTTGTGGGATGTTTTACTTCCTGGAAAATTTTCATATTAAGTCATCATTTGATCTGGGTTCACTTGGAAGTATGGCCATGTC------TGAATCTGGTCAGAGTATAAACTTTGACCAACACACTGAGACTTCTGGATAAGACAGCAAACTATTATGGA--------AGTTGG---CTCGTCCCT-AGCTCA--ATCAGGAAACACTATGCAAGCAACCAGAAGAATGATTGAAAACAGAATCAGTACAACT--GGTGGTAACAAAGGA-TATGAGGGCCTTTTTCAGAG----AAGTGAATCACAGTCCACACCTGAAGAG------CTGTCACTACCTAGGGGCTGCTG--AGAAGGAGCTTTCTAATTGCCCTTATCTCTTTATTCTACATTGGCCCAGATAAATCACTGTTTCCCCTAATAATGCTTTGCAGGGAGGGG-ACATAGC i canFam3.chr16 C 0 C 0 a score=53738.000000 s hg38.chr4_KI270785v1_alt 39019 19 + 119912 ATCCCCAGGACGGCACATG s panTro4.chr4 190311366 19 + 193495092 AGCCCCAGGACGGCACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277877 19 + 198332218 AGCCCCAGGCCTGCACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248963 19 + 115148730 AGCCCCAGGACTGTACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051790 19 + 184069350 AGCCCCAGGCCTGCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389059 19 + 189454096 AGCCCCAGGCCTGCACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176003988 19 + 178775436 agCCCCAGGCCTGCACATG i papAnu2.chr5 C 0 I 65 s chlSab2.chr7 132847059 19 + 135778131 AGCCCCAGGCCTGCACATG i chlSab2.chr7 C 0 I 75 s calJac3.chr3 188231769 18 - 190850796 AG-CCCAGGCCTGCACATG i calJac3.chr3 C 0 C 0 s mm10.chr8 84714142 16 - 129401213 ATCTCCAGGCCGGCCT--- i mm10.chr8 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C a score=1573.000000 s hg38.chr4_KI270785v1_alt 39038 2 + 119912 AG s panTro4.chr4 190311385 2 + 193495092 AG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277896 2 + 198332218 AG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248982 2 + 115148730 AG i nomLeu3.chr7b C 0 I 125 s macFas5.chr5 186389078 2 + 189454096 TG i macFas5.chr5 C 0 C 0 s calJac3.chr3 188231787 2 - 190850796 TG i calJac3.chr3 C 0 C 0 s mm10.chr8 84714158 1 - 129401213 -G i mm10.chr8 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e chlSab2.chr7 132847078 75 + 135778131 I e papAnu2.chr5 176004007 65 + 178775436 I e rheMac3.chr5 181051809 0 + 184069350 C a score=4112.000000 s hg38.chr4_KI270785v1_alt 39040 5 + 119912 GAAGA s panTro4.chr4 190311387 5 + 193495092 AAAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277898 5 + 198332218 GAAGA i ponAbe2.chr4 C 0 C 0 s macFas5.chr5 186389080 5 + 189454096 GATGA i macFas5.chr5 C 0 C 0 s calJac3.chr3 188231789 5 - 190850796 GATGA i calJac3.chr3 C 0 C 0 s mm10.chr8 84714159 5 - 129401213 AATGA i mm10.chr8 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e chlSab2.chr7 132847078 75 + 135778131 I e papAnu2.chr5 176004007 65 + 178775436 I e rheMac3.chr5 181051809 0 + 184069350 C e nomLeu3.chr7b 111248984 125 + 115148730 I a score=2100.000000 s hg38.chr4_KI270785v1_alt 39045 1 + 119912 G s panTro4.chr4 190311392 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277903 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s macFas5.chr5 186389085 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004072 1 + 178775436 G i papAnu2.chr5 I 65 C 0 s calJac3.chr3 188231794 1 - 190850796 G i calJac3.chr3 C 0 T 12 s mm10.chr8 84714164 1 - 129401213 G i mm10.chr8 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e chlSab2.chr7 132847078 75 + 135778131 I e rheMac3.chr5 181051809 0 + 184069350 C e nomLeu3.chr7b 111248984 125 + 115148730 I a score=3000.000000 s hg38.chr4_KI270785v1_alt 39046 2 + 119912 GC s panTro4.chr4 190311393 2 + 193495092 GC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277904 2 + 198332218 GC i ponAbe2.chr4 C 0 C 0 s macFas5.chr5 186389086 2 + 189454096 GC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004073 2 + 178775436 GC i papAnu2.chr5 C 0 C 0 s mm10.chr8 84714165 2 - 129401213 GC i mm10.chr8 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e calJac3.chr3 188231795 12 - 190850796 T e chlSab2.chr7 132847078 75 + 135778131 I e rheMac3.chr5 181051809 0 + 184069350 C e nomLeu3.chr7b 111248984 125 + 115148730 I a score=6327.000000 s hg38.chr4_KI270785v1_alt 39048 5 + 119912 AGGCA s panTro4.chr4 190311395 5 + 193495092 AGGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277906 5 + 198332218 AGGCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249109 5 + 115148730 AGGTG i nomLeu3.chr7b I 125 C 0 s macFas5.chr5 186389088 5 + 189454096 AGGCG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004075 5 + 178775436 AGGCG i papAnu2.chr5 C 0 C 0 s mm10.chr8 84714167 5 - 129401213 AAACA i mm10.chr8 C 0 I 26 e canFam3.chr16 15723926 0 - 59632846 C e calJac3.chr3 188231795 12 - 190850796 T e chlSab2.chr7 132847078 75 + 135778131 I e rheMac3.chr5 181051809 0 + 184069350 C a score=340.000000 s hg38.chr4_KI270785v1_alt 39053 1 + 119912 C s panTro4.chr4 190311400 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277911 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249114 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389093 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004080 1 + 178775436 A i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231795 12 - 190850796 T e chlSab2.chr7 132847078 75 + 135778131 I e rheMac3.chr5 181051809 0 + 184069350 C a score=26065.000000 s hg38.chr4_KI270785v1_alt 39054 15 + 119912 CATGCGAGTGCTGAG s panTro4.chr4 190311401 15 + 193495092 CATGCGAGTGCTGAG i panTro4.chr4 C 0 I 765 s ponAbe2.chr4 195277912 15 + 198332218 CATGCGAGTGCTGGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249115 15 + 115148730 CATGCGAGTGCTAGG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389094 15 + 189454096 CATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004081 15 + 178775436 CATGCGAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847153 15 + 135778131 CATGTGAGTGCTGGA i chlSab2.chr7 I 75 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231795 12 - 190850796 T e rheMac3.chr5 181051809 0 + 184069350 C a score=43143.000000 s hg38.chr4_KI270785v1_alt 39069 24 + 119912 GAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190312181 24 + 193495092 GAGGAACCCTGGACACCACCATTT i panTro4.chr4 I 765 C 0 s ponAbe2.chr4 195277927 24 + 198332218 GAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249130 24 + 115148730 GAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389109 24 + 189454096 GAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004096 24 + 178775436 GAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847168 24 + 135778131 GAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231795 12 - 190850796 T e rheMac3.chr5 181051809 0 + 184069350 C a score=8261.000000 s hg38.chr4_KI270785v1_alt 39093 4 + 119912 CACA s panTro4.chr4 190312205 4 + 193495092 CATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277951 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249154 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389133 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847192 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 12 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051809 0 + 184069350 C a score=3276.000000 s hg38.chr4_KI270785v1_alt 39097 1 + 119912 T s panTro4.chr4 190312209 1 + 193495092 T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277955 1 + 198332218 T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249158 1 + 115148730 T i nomLeu3.chr7b C 0 T 176 s rheMac3.chr5 181051809 1 + 184069350 T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389137 1 + 189454096 T i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004124 1 + 178775436 T i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847196 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 1 - 190850796 T i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=5400.000000 s hg38.chr4_KI270785v1_alt 39098 4 + 119912 GGAA s panTro4.chr4 190312210 4 + 193495092 GCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277956 4 + 198332218 GGAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248983 4 + 115148730 GGAA i nomLeu3.chr7b T 176 C 0 s rheMac3.chr5 181051810 4 + 184069350 GGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389138 4 + 189454096 GCAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004125 4 + 178775436 GCAT i papAnu2.chr5 C 0 T 59 s chlSab2.chr7 132847197 4 + 135778131 GCAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231788 4 - 190850796 GGAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=55057.000000 s hg38.chr4_KI270785v1_alt 39102 18 + 119912 GAGGCAGGCGACATGCGA s panTro4.chr4 190312214 18 + 193495092 GAGGCAGGCGACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277960 18 + 198332218 GAGGCAGGCGACATGCGA i ponAbe2.chr4 C 0 I 295 s nomLeu3.chr7b 111248987 18 + 115148730 GAGGCAGGCGACATGCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 18 + 184069350 GAGGCAGGCGACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389142 18 + 189454096 GAGGCAGGTGACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004070 18 + 178775436 GAGGCAGGCGACATGCGA i papAnu2.chr5 T 59 C 0 s chlSab2.chr7 132847201 18 + 135778131 GAGGCAGGTGACATGTGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 18 - 190850796 GAGGCAGGTGGCATGACA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=45555.000000 s hg38.chr4_KI270785v1_alt 39120 15 + 119912 GTGCTGGAGAGGAAG s panTro4.chr4 190312232 15 + 193495092 GTGCTGGAGAGGAAC i panTro4.chr4 C 0 T 472 s ponAbe2.chr4 195278273 15 + 198332218 GTGCTGGAGAGGAAC i ponAbe2.chr4 I 295 C 0 s nomLeu3.chr7b 111249005 15 + 115148730 GTGCTAGGGAGGAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051832 15 + 184069350 GTGCTGGAGAGGAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389160 15 + 189454096 GTGCTGGAGAGGAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004088 15 + 178775436 GTGCTGGAGAGGAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847219 15 + 135778131 GTGCCAGAGAGGAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231810 15 - 190850796 GTGCTGGAGAGGAAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16894.000000 s hg38.chr4_KI270785v1_alt 39135 7 + 119912 CCCGGAC s panTro4.chr4 190311775 7 + 193495092 CCCGGAC i panTro4.chr4 T 472 C 0 s ponAbe2.chr4 195278288 7 + 198332218 CCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249020 7 + 115148730 CCTGAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051847 7 + 184069350 CTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389175 7 + 189454096 CTCGGAC i macFas5.chr5 C 0 T 59 s papAnu2.chr5 176004103 7 + 178775436 CCCGGAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847234 7 + 135778131 CCCGGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231825 7 - 190850796 CCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=32284.000000 s hg38.chr4_KI270785v1_alt 39142 10 + 119912 GCCACCATTT s panTro4.chr4 190311782 10 + 193495092 GCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278295 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249027 10 + 115148730 GTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389123 10 + 189454096 GCCACCATTT i macFas5.chr5 T 59 C 0 s papAnu2.chr5 176004110 10 + 178775436 GCCACCATTT i papAnu2.chr5 C 0 T 117 s chlSab2.chr7 132847241 10 + 135778131 GCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=165725.000000 s hg38.chr4_KI270785v1_alt 39152 61 + 119912 CACGTGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGG-CGCCACCATTTCA s panTro4.chr4 190311792 61 + 193495092 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCCGGA-CGCCACCATTTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278305 61 + 198332218 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGA-CGCCACCATTTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 61 + 115148730 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGA-GGCCACCATTTCA i nomLeu3.chr7b C 0 T 117 s rheMac3.chr5 181051864 61 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGA-CGCCACCTTTTCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 61 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGA-CGCCACCTTTTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004003 61 + 178775436 CATGTGGACGAGGCAGGCGACATGCGCGTGCTGGAGAGGAACCTCGGA-TGCCAGCATTTCA i papAnu2.chr5 T 117 C 0 s chlSab2.chr7 132847251 62 + 135778131 CACATGGATGAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCTGGATCGCCACCACTTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 61 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGA-CACCACCATTTCC i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=4598.000000 s hg38.chr4_KI270785v1_alt 39213 3 + 119912 GAT s panTro4.chr4 190311853 3 + 193495092 TAT i panTro4.chr4 C 0 T 468 s ponAbe2.chr4 195278366 3 + 198332218 CAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248981 3 + 115148730 GAG i nomLeu3.chr7b T 117 C 0 s rheMac3.chr5 181051925 3 + 184069350 CAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389194 3 + 189454096 CAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004064 3 + 178775436 CAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847313 3 + 135778131 CAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231844 3 - 190850796 CAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2800.000000 s hg38.chr4_KI270785v1_alt 39216 1 + 119912 G s ponAbe2.chr4 195278369 1 + 198332218 G i ponAbe2.chr4 C 0 T 294 s nomLeu3.chr7b 111248984 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389197 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004067 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847316 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190311856 468 + 193495092 T a score=1816.000000 s hg38.chr4_KI270785v1_alt 39217 2 + 119912 AA s panTro4.chr4 190311388 2 + 193495092 AA i panTro4.chr4 T 468 C 0 s ponAbe2.chr4 195278076 2 + 198332218 AA i ponAbe2.chr4 T 294 C 0 s nomLeu3.chr7b 111248985 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004068 2 + 178775436 GG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847317 2 + 135778131 GA i chlSab2.chr7 C 0 T 236 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=27352.000000 s hg38.chr4_KI270785v1_alt 39219 9 + 119912 GAGGCGGGC s panTro4.chr4 190311390 9 + 193495092 GAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278078 9 + 198332218 GAGGCAGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248987 9 + 115148730 GAGGCAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004070 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847083 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 236 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=116768.000000 s hg38.chr4_KI270785v1_alt 39228 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190311399 41 + 193495092 AACATGCGAGTGCTGAGGAGGAACCCTGGATGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278087 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248996 41 + 115148730 GACATGCGAGTGCTAGGGAGGAATCCTGAAGGTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004079 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847092 41 + 135778131 GATATGCAAGTGCTGGAGAGGAACTCCGGACACCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17106.000000 s hg38.chr4_KI270785v1_alt 39269 7 + 119912 CACATGG s panTro4.chr4 190311440 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278128 7 + 198332218 TACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 176 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847133 7 + 135778131 CACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=23652.000000 s hg38.chr4_KI270785v1_alt 39276 8 + 119912 AAGAGGCA s panTro4.chr4 190311447 8 + 193495092 AAGAGGCA i panTro4.chr4 C 0 I 118 s ponAbe2.chr4 195278135 8 + 198332218 AAGAGGCA i ponAbe2.chr4 C 0 I 59 s nomLeu3.chr7b 111249044 8 + 115148730 ATGAGGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 8 + 184069350 ATGAGGCA i rheMac3.chr5 T 176 C 0 s macFas5.chr5 186389257 8 + 189454096 ATGAGGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004127 8 + 178775436 ATGAGGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847140 8 + 135778131 ATGAGGCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 8 - 190850796 ATGAGGCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=25229.000000 s hg38.chr4_KI270785v1_alt 39284 10 + 119912 GGGGACATGT s panTro4.chr4 190311573 10 + 193495092 GGCGACATGC i panTro4.chr4 I 118 C 0 s ponAbe2.chr4 195278202 10 + 198332218 GGTGACTTGC i ponAbe2.chr4 I 59 C 0 s nomLeu3.chr7b 111249052 10 + 115148730 GGTGACATGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051820 10 + 184069350 GGCGACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389265 10 + 189454096 GGCGACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004135 10 + 178775436 GGTGACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847148 10 + 135778131 GGTGACATGT i chlSab2.chr7 C 0 I 236 s calJac3.chr3 188231798 10 - 190850796 GGTGGCATGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=116807.000000 s hg38.chr4_KI270785v1_alt 39294 41 + 119912 GAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATGG s panTro4.chr4 190311583 40 + 193495092 GAGTGCTGAGGAGAAACCC-GGACGCCACCATTTCACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278212 41 + 198332218 GAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249062 41 + 115148730 GAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATGG i nomLeu3.chr7b C 0 T 41 s rheMac3.chr5 181051830 41 + 184069350 GAGTGCTGGAGAGGAACCTCGGACGCCACCATTTCACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389275 41 + 189454096 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004145 41 + 178775436 AAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847394 41 + 135778131 CAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGG i chlSab2.chr7 I 236 C 0 s calJac3.chr3 188231808 41 - 190850796 CAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=1694.000000 s hg38.chr4_KI270785v1_alt 39335 1 + 119912 A s panTro4.chr4 190311623 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278253 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181051871 1 + 184069350 A i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389316 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004186 1 + 178775436 G i papAnu2.chr5 C 0 I 117 s chlSab2.chr7 132847435 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 1 - 190850796 A i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e nomLeu3.chr7b 111249103 41 + 115148730 T a score=38471.000000 s hg38.chr4_KI270785v1_alt 39336 17 + 119912 AGAGGCAGGCGACATGC s panTro4.chr4 190311624 17 + 193495092 AGAGGCAGGCGACATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278254 17 + 198332218 AGAGGCAGGCGACATGC i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181051872 17 + 184069350 TGAGGCAGGTGACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389317 17 + 189454096 TGAGGCAGGTGACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004304 17 + 178775436 TGAGGCAGGTGACATGC i papAnu2.chr5 I 117 C 0 s chlSab2.chr7 132847436 17 + 135778131 TGAGGCAGGTGACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231791 17 - 190850796 TGAGGCAGGTGGCATGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e nomLeu3.chr7b 111249103 41 + 115148730 T a score=109979.000000 s hg38.chr4_KI270785v1_alt 39353 39 + 119912 GAGTGCTGTGGAGGAACCCAGGGCGCCACCATTTCAGAT s panTro4.chr4 190311641 39 + 193495092 GAGTGCTGAGGAGGAACCCTGGACACCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278271 39 + 198332218 GAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 T 412 s nomLeu3.chr7b 111249062 39 + 115148730 GAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b T 41 C 0 s rheMac3.chr5 181051889 39 + 184069350 GAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389334 39 + 189454096 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 T 293 s papAnu2.chr5 176004321 39 + 178775436 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847453 39 + 135778131 GAGTGCTAGAGAGGAACCCCGGATGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231808 39 - 190850796 CAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2191.000000 s hg38.chr4_KI270785v1_alt 39392 3 + 119912 GAA s panTro4.chr4 190311680 3 + 193495092 GCA i panTro4.chr4 C 0 T 175 s ponAbe2.chr4 195277898 3 + 198332218 GAA i ponAbe2.chr4 T 412 C 0 s nomLeu3.chr7b 111249101 3 + 115148730 GGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 3 + 184069350 GGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 3 + 189454096 GAT i macFas5.chr5 T 293 C 0 s papAnu2.chr5 176004360 3 + 178775436 GGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847492 3 + 135778131 GGA i chlSab2.chr7 C 0 T 337 s calJac3.chr3 188231789 3 - 190850796 GAT i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=36261.000000 s hg38.chr4_KI270785v1_alt 39395 16 + 119912 GAGGCGGGCGACATGC s panTro4.chr4 190311508 16 + 193495092 GAGGCAGGCGACATGC i panTro4.chr4 T 175 C 0 s ponAbe2.chr4 195277901 16 + 198332218 GAGGCAGGCAACATGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249104 16 + 115148730 GAGGGAGGTGACATGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051931 16 + 184069350 GAGGCAGGCGACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389083 16 + 189454096 GAGGCAGGCGACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004363 16 + 178775436 GAGGCAGGCGACATGC i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231792 16 - 190850796 GAGGCAGGTGGCATGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847495 337 + 135778131 T a score=123650.000000 s hg38.chr4_KI270785v1_alt 39411 41 + 119912 GAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATGG s panTro4.chr4 190311524 41 + 193495092 GAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277917 41 + 198332218 GAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249120 41 + 115148730 GAGTGCTAGGGAGGAACCCTGGAGGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051947 41 + 184069350 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGG i rheMac3.chr5 C 0 T 176 s macFas5.chr5 186389099 41 + 189454096 GAGTGCTGGAGAGGAACCTCGGACGCCACCATTTCACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004379 41 + 178775436 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847158 41 + 135778131 GAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGC i chlSab2.chr7 T 337 C 0 s calJac3.chr3 188231808 41 - 190850796 CAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-8078.000000 s hg38.chr4_KI270785v1_alt 39452 2 + 119912 AA- s panTro4.chr4 190311565 2 + 193495092 AA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277958 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249161 2 + 115148730 AT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 1 + 184069350 A-- i rheMac3.chr5 T 176 I 1 s macFas5.chr5 186389140 1 + 189454096 A-- i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004420 1 + 178775436 A-- i papAnu2.chr5 C 0 T 351 s chlSab2.chr7 132847199 1 + 135778131 A-- i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=20952.000000 s hg38.chr4_KI270785v1_alt 39454 6 + 119912 GAGGCA s panTro4.chr4 190311567 6 + 193495092 GAGGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277960 6 + 198332218 GAGGCA i ponAbe2.chr4 C 0 I 413 s nomLeu3.chr7b 111249163 6 + 115148730 GAGGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 6 + 184069350 GAGGCA i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389142 6 + 189454096 GAGGCA i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004070 6 + 178775436 GAGGCA i papAnu2.chr5 T 351 C 0 s chlSab2.chr7 132847201 6 + 135778131 GAGGCA i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231792 6 - 190850796 GAGGCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=118706.000000 s hg38.chr4_KI270785v1_alt 39460 44 + 119912 GGGGACATGTGAGTGCTGAGGAGGAACCCAGGACGCCACTATTT s panTro4.chr4 190311573 43 + 193495092 GGCGACATGCGAGTGCTGAGGAGAAACCC-GGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278379 44 + 198332218 GGCGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 I 413 C 0 s nomLeu3.chr7b 111249169 44 + 115148730 GGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051820 44 + 184069350 GGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389148 44 + 189454096 GGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004076 44 + 178775436 GGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847207 44 + 135778131 GGTGACATGTGAGTGCCAGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231798 44 - 190850796 GGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11728.000000 s hg38.chr4_KI270785v1_alt 39504 4 + 119912 CACA s panTro4.chr4 190311616 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249213 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389192 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 4 + 178775436 CACA i papAnu2.chr5 C 0 T 117 s chlSab2.chr7 132847251 4 + 135778131 CACA i chlSab2.chr7 C 0 T 177 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=155046.000000 s hg38.chr4_KI270785v1_alt 39508 55 + 119912 TGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190311620 55 + 193495092 TGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278427 55 + 198332218 TGGAAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249217 55 + 115148730 TGGATGAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 55 + 184069350 TGGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389196 54 + 189454096 TGGG-GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004007 55 + 178775436 TGGACGAGGCAGGCGACATGCGCGTGCTGGAGAGGAACCTCGGATGCCAGCATTT i papAnu2.chr5 T 117 C 0 s chlSab2.chr7 132847078 55 + 135778131 TGGATGAGGCAGGTGATATGCAAGTGCTGGAGAGGAACTCCGGACACCACCATTT i chlSab2.chr7 T 177 C 0 s calJac3.chr3 188231787 55 - 190850796 TGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17296.000000 s hg38.chr4_KI270785v1_alt 39563 8 + 119912 CACATGGA s panTro4.chr4 190311675 8 + 193495092 CATATGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278482 8 + 198332218 CACATGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249272 8 + 115148730 CACATGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 8 + 184069350 CACATGCA i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389074 8 + 189454096 CATGTGGA i macFas5.chr5 T 176 I 1 s papAnu2.chr5 176004062 8 + 178775436 CACATGGG i papAnu2.chr5 C 0 I 176 s chlSab2.chr7 132847133 8 + 135778131 CACATGCA i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231842 8 - 190850796 CCCATGGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-1798.000000 s hg38.chr4_KI270785v1_alt 39571 2 + 119912 AA- s panTro4.chr4 190311683 2 + 193495092 TG- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278490 2 + 198332218 AG- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249280 2 + 115148730 TG- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051873 1 + 184069350 -G- i rheMac3.chr5 I 1 T 59 s macFas5.chr5 186389083 1 + 189454096 -G- i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004246 1 + 178775436 -G- i papAnu2.chr5 I 176 C 0 s chlSab2.chr7 132847142 1 + 135778131 -G- i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231850 2 - 190850796 -GA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=5900.000000 s hg38.chr4_KI270785v1_alt 39573 2 + 119912 AG s panTro4.chr4 190311685 2 + 193495092 AG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278492 2 + 198332218 AG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249282 2 + 115148730 AG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051815 2 + 184069350 AG i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389084 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004247 2 + 178775436 AG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847143 2 + 135778131 AG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231852 2 - 190850796 GG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=135646.000000 s hg38.chr4_KI270785v1_alt 39575 47 + 119912 GCAGGCAACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311687 47 + 193495092 GCAGGCGACATGCGAGTGCTAGAGAGGAATCCCGGATGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278494 47 + 198332218 GCAGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249284 47 + 115148730 GCAGGTGACATGCAAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051817 47 + 184069350 GCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389086 47 + 189454096 GCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004249 47 + 178775436 GCAGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 T 293 s chlSab2.chr7 132847145 47 + 135778131 GCAGGTGACATGTGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231795 47 - 190850796 GCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 59 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=14004.000000 s hg38.chr4_KI270785v1_alt 39622 7 + 119912 CACGTGG s panTro4.chr4 190311734 7 + 193495092 CACAAGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278541 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 T 236 s nomLeu3.chr7b 111249331 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004003 7 + 178775436 CATGTGG i papAnu2.chr5 T 293 C 0 s chlSab2.chr7 132847192 7 + 135778131 CACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=23794.000000 s hg38.chr4_KI270785v1_alt 39629 8 + 119912 AAGAGGCA s panTro4.chr4 190311741 8 + 193495092 ATGAGGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278312 8 + 198332218 AAGAGGCA i ponAbe2.chr4 T 236 C 0 s nomLeu3.chr7b 111249338 8 + 115148730 ATGAGGCA i nomLeu3.chr7b C 0 I 121 s rheMac3.chr5 181051871 8 + 184069350 ATGAGGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 8 + 189454096 ATGAGGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004010 8 + 178775436 ACGAGGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847199 8 + 135778131 ATGAGGCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 8 - 190850796 ATGAGGCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6250.000000 s hg38.chr4_KI270785v1_alt 39637 3 + 119912 GGC s panTro4.chr4 190311749 3 + 193495092 GGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278320 3 + 198332218 GGC i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181051879 3 + 184069350 GGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389148 3 + 189454096 GGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004018 3 + 178775436 GGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847207 3 + 135778131 GGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231798 3 - 190850796 GGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e nomLeu3.chr7b 111249346 121 + 115148730 I a score=75102.000000 s hg38.chr4_KI270785v1_alt 39640 26 + 119912 GACATGCGAGTGCTGGAGAGGAACCC s panTro4.chr4 190311752 26 + 193495092 GACATGCGAGTGCTGAGGAGAAACCC i panTro4.chr4 C 0 T 323 s ponAbe2.chr4 195278323 26 + 198332218 GACATGCGAGTGCTGGAGAGGAACCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249467 26 + 115148730 GACATGCGAGTGCTGGGGAGGAACCC i nomLeu3.chr7b I 121 C 0 s rheMac3.chr5 181051882 26 + 184069350 GACATGCGAGTGCTGGAGAGGAACCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389151 26 + 189454096 GACATGCGAGTGCTGGAGAGGAACCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004021 26 + 178775436 GACATGCGCGTGCTGGAGAGGAACCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847210 26 + 135778131 GACATGTGAGTGCCAGAGAGGAACCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 26 - 190850796 GGCATGACAGTGCTGGAGAGGAACCC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=35989.000000 s hg38.chr4_KI270785v1_alt 39666 17 + 119912 CGGGCGCCACCATTTCA s ponAbe2.chr4 195278349 17 + 198332218 TGGACGCCACCATTTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249493 17 + 115148730 CGGACGCCACCATTTCA i nomLeu3.chr7b C 0 T 529 s rheMac3.chr5 181051908 17 + 184069350 CGGACGCCACCTTTTCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389177 17 + 189454096 CGGACGCCACCTTTTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004047 17 + 178775436 CGGATGCCAGCATTTCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847236 17 + 135778131 CGGACGCCACCATTTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231827 17 - 190850796 TGGACACCACCATTTCC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190311778 323 + 193495092 T a score=3761.000000 s hg38.chr4_KI270785v1_alt 39683 3 + 119912 GAT s ponAbe2.chr4 195278366 3 + 198332218 CAT i ponAbe2.chr4 C 0 T 403 s nomLeu3.chr7b 111248981 3 + 115148730 GAG i nomLeu3.chr7b T 529 C 0 s rheMac3.chr5 181051925 3 + 184069350 CAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389194 3 + 189454096 CAT i macFas5.chr5 C 0 T 117 s papAnu2.chr5 176004064 3 + 178775436 CAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847253 3 + 135778131 CAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231844 3 - 190850796 CAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190311778 323 + 193495092 T a score=2184.000000 s hg38.chr4_KI270785v1_alt 39686 3 + 119912 GAA s nomLeu3.chr7b 111248984 3 + 115148730 GAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 3 + 184069350 GGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 3 + 189454096 GAT i macFas5.chr5 T 117 C 0 s papAnu2.chr5 176004067 3 + 178775436 GGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847256 3 + 135778131 GGA i chlSab2.chr7 C 0 T 176 s calJac3.chr3 188231847 3 - 190850796 GGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278369 403 + 198332218 T e panTro4.chr4 190311778 323 + 193495092 T a score=10337.000000 s hg38.chr4_KI270785v1_alt 39689 6 + 119912 GAGGCG s nomLeu3.chr7b 111248987 6 + 115148730 GAGGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051931 6 + 184069350 GAGGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389083 6 + 189454096 GAGGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004070 6 + 178775436 GAGGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847083 6 + 135778131 GAGGCA i chlSab2.chr7 T 176 C 0 s calJac3.chr3 188231850 6 - 190850796 GAGGCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278369 403 + 198332218 T e panTro4.chr4 190311778 323 + 193495092 T a score=9752.000000 s hg38.chr4_KI270785v1_alt 39695 3 + 119912 GGC s panTro4.chr4 190311455 3 + 193495092 GGC i panTro4.chr4 T 323 C 0 s ponAbe2.chr4 195277966 3 + 198332218 GGC i ponAbe2.chr4 T 403 C 0 s nomLeu3.chr7b 111248993 3 + 115148730 GGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051937 3 + 184069350 GGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389089 3 + 189454096 GGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004076 3 + 178775436 GGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847089 3 + 135778131 GGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231856 3 - 190850796 GGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=120434.000000 s hg38.chr4_KI270785v1_alt 39698 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190311458 41 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277969 41 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCTGGATGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248996 41 + 115148730 GACATGCGAGTGCTAGGGAGGAATCCTGAAGGTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 T 59 s papAnu2.chr5 176004079 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847092 41 + 135778131 GATATGCAAGTGCTGGAGAGGAACTCCGGACACCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=14931.000000 s hg38.chr4_KI270785v1_alt 39739 7 + 119912 CACATGG s panTro4.chr4 190311499 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278010 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389074 7 + 189454096 CATGTGG i macFas5.chr5 T 59 C 0 s papAnu2.chr5 176004120 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847133 7 + 135778131 CACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231842 7 - 190850796 CCCATGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=152484.000000 s hg38.chr4_KI270785v1_alt 39746 52 + 119912 AAGAGGCAGGGGACATGTGAGTGCTGAGGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311506 52 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278017 52 + 198332218 AAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249044 52 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 52 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTT i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389081 52 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 T 59 s papAnu2.chr5 176004127 52 + 178775436 ATGAGGCAGGTGACATGCAAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847140 52 + 135778131 ATGAGGCAGGTGACATGTGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 52 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 59 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10210.000000 s hg38.chr4_KI270785v1_alt 39798 4 + 119912 CACA s panTro4.chr4 190311558 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249096 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051923 4 + 184069350 CACA i rheMac3.chr5 C 0 T 118 s macFas5.chr5 186389074 4 + 189454096 CATG i macFas5.chr5 T 59 C 0 s papAnu2.chr5 176004179 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847192 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3276.000000 s hg38.chr4_KI270785v1_alt 39802 1 + 119912 T s panTro4.chr4 190311562 1 + 193495092 T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278073 1 + 198332218 T i ponAbe2.chr4 C 0 T 177 s nomLeu3.chr7b 111249100 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 1 + 184069350 T i rheMac3.chr5 T 118 C 0 s macFas5.chr5 186389078 1 + 189454096 T i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004183 1 + 178775436 T i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847196 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 1 - 190850796 T i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=144693.000000 s hg38.chr4_KI270785v1_alt 39803 54 + 119912 GGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACTATTT s panTro4.chr4 190311563 53 + 193495092 GGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCC-GGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277897 54 + 198332218 GGAAGAGGCAGGCAACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 T 177 C 0 s nomLeu3.chr7b 111249101 53 + 115148730 -GGGGAGGGAGGTGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051810 54 + 184069350 GGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389079 54 + 189454096 GGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004184 53 + 178775436 GGG-GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847197 54 + 135778131 GCATGAGGCAGGTGACATGTGAGTGCCAGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231788 54 - 190850796 GGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11728.000000 s hg38.chr4_KI270785v1_alt 39857 4 + 119912 CACA s panTro4.chr4 190311616 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277951 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249154 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389133 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004237 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847251 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=87477.000000 s hg38.chr4_KI270785v1_alt 39861 31 + 119912 TGGAAGAGACAGGCGACATGCGAGTGCTGGA s panTro4.chr4 190311620 31 + 193495092 TGGAAGAGGCAGGCGACATGCGAGTGCTGAG i panTro4.chr4 C 0 T 235 s ponAbe2.chr4 195277955 31 + 198332218 TGGAAGAGGCAGGCGACATGCGAGTGCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249158 31 + 115148730 TGGATGAGGCAGGTGACATGCGAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 31 + 184069350 TGGATGAGGCAGGCGACATGCGAGTGCTGGA i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389137 31 + 189454096 TGCATGAGGCAGGTGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004241 31 + 178775436 TGCATGAGGCAGGCGACATGCGAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847255 31 + 135778131 TGGATGAGGCAGGTGACATGTCAGTGCTGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 31 - 190850796 TGGATGAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=76501.000000 s hg38.chr4_KI270785v1_alt 39892 28 + 119912 GAGGAACCCTGGA-CGCCACCATTTCACA s panTro4.chr4 190311416 28 + 193495092 GAGGAACCCTGGA-TGCCACCATTTCACA i panTro4.chr4 T 235 C 0 s ponAbe2.chr4 195277986 28 + 198332218 GAGGAACCCTGGA-TGCCACCATTTCACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249189 28 + 115148730 GAGGAACCCTGGA-GGCCACCATTTCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051840 28 + 184069350 GAGGAACCTCGGA-CGCCACCATTTCACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389168 28 + 189454096 GAGGAACCTCGGA-CGCCACCTTTTCACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004272 28 + 178775436 GAGGAGCCCCAGA-TGCCAGCATTTCACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847286 29 + 135778131 GAGGAACCCTGGATCGCCACCACTTCACA i chlSab2.chr7 C 0 T 237 s calJac3.chr3 188231818 28 - 190850796 GAGGAACCCTGGA-CACCACCATTTCCCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=7272.000000 s hg38.chr4_KI270785v1_alt 39920 3 + 119912 TGG s panTro4.chr4 190311444 3 + 193495092 TGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278014 3 + 198332218 TGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249217 3 + 115148730 TGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 3 + 184069350 TGG i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389196 3 + 189454096 TGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004300 3 + 178775436 TGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847078 3 + 135778131 TGG i chlSab2.chr7 T 237 C 0 s calJac3.chr3 188231846 3 - 190850796 TGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=149831.000000 s hg38.chr4_KI270785v1_alt 39923 52 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311447 52 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278017 52 + 198332218 AAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249220 52 + 115148730 ATGAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 52 + 184069350 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389199 51 + 189454096 G-GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004303 52 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847081 52 + 135778131 ATGAGGCAGGTGATATGCAAGTGCTGGAGAGGAACTCCGGACACCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 52 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 59 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10933.000000 s hg38.chr4_KI270785v1_alt 39975 4 + 119912 CACA s panTro4.chr4 190311499 4 + 193495092 CATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249272 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389250 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004355 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847133 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=158724.000000 s hg38.chr4_KI270785v1_alt 39979 55 + 119912 TGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311503 55 + 193495092 TGCATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278073 55 + 198332218 TGTAAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249276 55 + 115148730 TGGATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 55 + 184069350 TGGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389254 55 + 189454096 TGCATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004359 54 + 178775436 TGGG-GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847137 55 + 135778131 TGCATGAGGCAGGTGACATGTGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 55 - 190850796 TGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17556.000000 s hg38.chr4_KI270785v1_alt 40034 6 + 119912 CACATG s panTro4.chr4 190311558 6 + 193495092 CACATG i panTro4.chr4 C 0 I 234 s ponAbe2.chr4 195278128 6 + 198332218 TACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249331 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004413 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847192 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=109449.000000 s hg38.chr4_KI270785v1_alt 40040 39 + 119912 GAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCC s panTro4.chr4 190311798 39 + 193495092 GAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCC i panTro4.chr4 I 234 C 0 s ponAbe2.chr4 195278134 39 + 198332218 GAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249337 39 + 115148730 GATGAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051870 39 + 184069350 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389315 39 + 189454096 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004419 39 + 178775436 CATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847198 39 + 135778131 CATGAGGCAGGTGACATGTGAGTGCCAGAGAGGAACCCC i chlSab2.chr7 C 0 I 236 s calJac3.chr3 188231789 39 - 190850796 GATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=55188.000000 s hg38.chr4_KI270785v1_alt 40079 21 + 119912 GGACGCCACCATTTCACATGG s panTro4.chr4 190311837 21 + 193495092 GGACGCCACCATTTCATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278173 21 + 198332218 GGATGCCACCATTTCACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249376 21 + 115148730 GAAGGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 21 + 184069350 GGACGCCACCTTTTCACATGG i rheMac3.chr5 C 0 T 113 s macFas5.chr5 186389354 21 + 189454096 GGATGCCACCATTTCACATGG i macFas5.chr5 C 0 T 57 s papAnu2.chr5 176004458 21 + 178775436 AGATGCCAGCATTTCACATGC i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132847473 21 + 135778131 GGATGCCACCATTTCACATGG i chlSab2.chr7 I 236 I 2 s calJac3.chr3 188231828 21 - 190850796 GGACACCACCATTTCCCATGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6209.000000 s hg38.chr4_KI270785v1_alt 40100 5 + 119912 AAGAC s panTro4.chr4 190311858 5 + 193495092 ATGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 5 + 198332218 AAGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249397 5 + 115148730 ATGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389318 3 + 189454096 --GAG i macFas5.chr5 T 57 C 0 s papAnu2.chr5 176004481 3 + 178775436 --GAG i papAnu2.chr5 I 2 C 0 s chlSab2.chr7 132847496 3 + 135778131 --GAG i chlSab2.chr7 I 2 C 0 s calJac3.chr3 188231790 5 - 190850796 ATGAG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051930 113 + 184069350 T a score=40647.000000 s hg38.chr4_KI270785v1_alt 40105 15 + 119912 GCAGGCGACATGCGA s panTro4.chr4 190311863 15 + 193495092 GCAGGCGACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278199 15 + 198332218 GCAGGTGACTTGCGA i ponAbe2.chr4 C 0 I 177 s nomLeu3.chr7b 111249402 15 + 115148730 GCAGGTGACATGCAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051817 15 + 184069350 GCAGGCGACATGCGA i rheMac3.chr5 T 113 C 0 s macFas5.chr5 186389321 15 + 189454096 GCAGGTGACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004484 15 + 178775436 GCAGGTGACATGCGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847499 15 + 135778131 GCAGGTGACATGTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231795 15 - 190850796 GCAGGTGGCATGACA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=57941.000000 s hg38.chr4_KI270785v1_alt 40120 18 + 119912 GTGCTGGAGAGGAACCCC s panTro4.chr4 190311878 18 + 193495092 GTGCTAGAGAGGAACCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278391 18 + 198332218 GTGCTGGAGAGGAACCCT i ponAbe2.chr4 I 177 C 0 s nomLeu3.chr7b 111249417 18 + 115148730 GTGCTGGGGAGGAACCCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051832 18 + 184069350 GTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389336 18 + 189454096 GTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004499 18 + 178775436 GTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847514 18 + 135778131 GTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 I 80 s calJac3.chr3 188231810 18 - 190850796 GTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=31470.000000 s hg38.chr4_KI270785v1_alt 40138 14 + 119912 GGGCGCCACCATTT s panTro4.chr4 190311896 14 + 193495092 GGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278409 14 + 198332218 GGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249435 14 + 115148730 GGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 14 + 184069350 GGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389354 14 + 189454096 GGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004517 14 + 178775436 GGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231828 14 - 190850796 GGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847532 80 + 135778131 I a score=405.000000 s hg38.chr4_KI270785v1_alt 40152 7 + 119912 CACATG--G s panTro4.chr4 190311910 7 + 193495092 CACAAG--C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 7 + 198332218 CACATG--G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249449 7 + 115148730 CACATG--G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC-- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389368 6 + 189454096 CACATG--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004531 7 + 178775436 CACATG-G- i papAnu2.chr5 C 0 T 225 s calJac3.chr3 188231783 7 - 190850796 CATGTG--G i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847532 80 + 135778131 I a score=20886.000000 s hg38.chr4_KI270785v1_alt 40159 10 + 119912 AAGAGGCAGG s panTro4.chr4 190311917 10 + 193495092 AAGAGGCAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 10 + 198332218 AAGAGGCAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249456 10 + 115148730 ATGAGGCAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 10 + 184069350 ATGAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389374 10 + 189454096 GGGAGGCTGG i macFas5.chr5 C 0 T 58 s chlSab2.chr7 132847612 10 + 135778131 ATGAGGCAGG i chlSab2.chr7 I 80 C 0 s calJac3.chr3 188231790 10 - 190850796 ATGAGGCAGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004538 225 + 178775436 T a score=91817.000000 s hg38.chr4_KI270785v1_alt 40169 32 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCTGGAC s panTro4.chr4 190311927 32 + 193495092 CGACATGCGAGTGCTGAGGAGGAACCCTGGAC i panTro4.chr4 C 0 I 177 s ponAbe2.chr4 195278440 32 + 198332218 CGACATGCGAGTGCTGGGGAGGAACCCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249466 32 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCCGGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051881 32 + 184069350 TGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389326 32 + 189454096 TGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 T 58 C 0 s papAnu2.chr5 176004313 32 + 178775436 TGACATGCGAGTGCTGGAGAGGAACCCCGGAT i papAnu2.chr5 T 225 C 0 s chlSab2.chr7 132847622 32 + 135778131 TGACATGCGAGTGCTAGAGAGGAACCCCAGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 32 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=67691.000000 s hg38.chr4_KI270785v1_alt 40201 26 + 119912 GCCACCATTTCACATGAA-GAGGCAGG s panTro4.chr4 190312136 27 + 193495092 GCCACCATTTCACATGCATGAGGCAGG i panTro4.chr4 I 177 C 0 s ponAbe2.chr4 195278472 27 + 198332218 GCCACCATTTCACATGGAAGAGGCAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249498 27 + 115148730 GCCACCATTTCACATGGATGAGGCGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051913 26 + 184069350 GCCACCTTTTCACATGGG-GAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389358 26 + 189454096 GCCACCATTTCACATGGG-GAGGCTGG i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004345 26 + 178775436 GCCACCATTTCACATGGG-GAGGCAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847654 26 + 135778131 GCCACCTTTTCACATGGG-GAGGCAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 26 - 190850796 ACCACCATTTCCCATGGG-GAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=137721.000000 s hg38.chr4_KI270785v1_alt 40227 48 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATG s panTro4.chr4 190312163 48 + 193495092 CGACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTTCATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278499 48 + 198332218 TGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249525 48 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051939 48 + 184069350 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389208 48 + 189454096 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i macFas5.chr5 T 176 T 57 s papAnu2.chr5 176004371 48 + 178775436 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847680 48 + 135778131 TGACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 48 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-72.000000 s hg38.chr4_KI270785v1_alt 40275 1 + 119912 A s panTro4.chr4 190312211 1 + 193495092 C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278547 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249573 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176004420 1 + 178775436 A i papAnu2.chr5 I 1 T 59 s chlSab2.chr7 132847728 1 + 135778131 G i chlSab2.chr7 C 0 T 352 s calJac3.chr3 188231848 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389256 57 + 189454096 T a score=15993.000000 s hg38.chr4_KI270785v1_alt 40276 6 + 119912 A-GAGGC s panTro4.chr4 190312212 7 + 193495092 ATGAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278548 6 + 198332218 G-GAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249574 6 + 115148730 G-GAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051988 6 + 184069350 G-GAGGC i rheMac3.chr5 C 0 T 116 s macFas5.chr5 186389199 6 + 189454096 G-GAGGC i macFas5.chr5 T 57 C 0 s papAnu2.chr5 176004362 6 + 178775436 G-GAGGC i papAnu2.chr5 T 59 C 0 s chlSab2.chr7 132847377 6 + 135778131 G-GAGGC i chlSab2.chr7 T 352 C 0 s calJac3.chr3 188231849 6 - 190850796 G-GAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=9237.000000 s hg38.chr4_KI270785v1_alt 40282 4 + 119912 AGGC s panTro4.chr4 190312219 4 + 193495092 AGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278554 4 + 198332218 AGGC i ponAbe2.chr4 C 0 T 580 s nomLeu3.chr7b 111249580 4 + 115148730 TGGC i nomLeu3.chr7b C 0 T 294 s rheMac3.chr5 181051878 4 + 184069350 AGGT i rheMac3.chr5 T 116 C 0 s macFas5.chr5 186389205 4 + 189454096 AGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004368 4 + 178775436 AGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 4 + 135778131 AGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231855 4 - 190850796 TGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16214.000000 s hg38.chr4_KI270785v1_alt 40286 9 + 119912 GACATGCGT s panTro4.chr4 190312223 9 + 193495092 GACATGCGA i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111249290 9 + 115148730 GACATGCAA i nomLeu3.chr7b T 294 C 0 s rheMac3.chr5 181051882 9 + 184069350 GACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 9 + 189454096 GACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004372 9 + 178775436 GACATGCGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 9 + 135778131 GACATGTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 9 - 190850796 GGCATGACA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278558 580 + 198332218 T a score=58158.000000 s hg38.chr4_KI270785v1_alt 40295 18 + 119912 GTGCTGGAGAGGAACCCT s panTro4.chr4 190312232 18 + 193495092 GTGCTGGAGAGGAACCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277978 18 + 198332218 GTGCTGGAGAGGAACCCT i ponAbe2.chr4 T 580 C 0 s nomLeu3.chr7b 111249299 18 + 115148730 GTGCTGGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051891 18 + 184069350 GTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389218 18 + 189454096 GTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004381 18 + 178775436 GTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847396 18 + 135778131 GTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 T 177 s calJac3.chr3 188231810 18 - 190850796 GTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=41937.000000 s hg38.chr4_KI270785v1_alt 40313 14 + 119912 GGACGCCACCATTT s panTro4.chr4 190312250 14 + 193495092 GGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195277996 14 + 198332218 GGATGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249317 14 + 115148730 GGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 14 + 184069350 GGACGCCACCTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389236 14 + 189454096 GGATGCCACCATTT i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004399 14 + 178775436 GGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847237 14 + 135778131 GGACGCCACCATTT i chlSab2.chr7 T 177 C 0 s calJac3.chr3 188231828 14 - 190850796 GGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10210.000000 s hg38.chr4_KI270785v1_alt 40327 4 + 119912 CACA s panTro4.chr4 190312264 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278010 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249331 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051923 4 + 184069350 CACA i rheMac3.chr5 C 0 T 118 s macFas5.chr5 186389074 4 + 189454096 CATG i macFas5.chr5 T 176 C 0 s papAnu2.chr5 176004413 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847251 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10548.000000 s hg38.chr4_KI270785v1_alt 40331 4 + 119912 TGGA s panTro4.chr4 190312268 4 + 193495092 TGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278014 4 + 198332218 TGTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249335 4 + 115148730 TGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 4 + 184069350 TGGA i rheMac3.chr5 T 118 I 1 s macFas5.chr5 186389078 4 + 189454096 TGGA i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004417 4 + 178775436 TGCA i papAnu2.chr5 C 0 T 351 s chlSab2.chr7 132847255 4 + 135778131 TGGA i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231787 4 - 190850796 TGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-1936.000000 s hg38.chr4_KI270785v1_alt 40335 1 + 119912 -A s panTro4.chr4 190312272 1 + 193495092 -A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278018 1 + 198332218 -A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249339 1 + 115148730 -T i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188231791 1 - 190850796 T- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847259 1 + 135778131 I e papAnu2.chr5 176004421 351 + 178775436 T e macFas5.chr5 186389082 1 + 189454096 I e rheMac3.chr5 181051813 1 + 184069350 I a score=112949.000000 s hg38.chr4_KI270785v1_alt 40336 40 + 119912 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGA-T s panTro4.chr4 190312273 40 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGA-C i panTro4.chr4 C 0 T 354 s ponAbe2.chr4 195278019 40 + 198332218 GAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGA-C i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249340 40 + 115148730 GAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGAA-G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 40 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGA-C i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389083 40 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGA-C i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004070 40 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGA-T i papAnu2.chr5 T 351 C 0 s chlSab2.chr7 132847260 41 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCTGGATC i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231792 40 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGA-C i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=31561.000000 s hg38.chr4_KI270785v1_alt 40376 10 + 119912 GCCACCATTT s panTro4.chr4 190311959 10 + 193495092 ACCACCATTT i panTro4.chr4 T 354 C 0 s ponAbe2.chr4 195278059 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249380 10 + 115148730 GCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389123 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004110 10 + 178775436 GCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847301 10 + 135778131 GCCACCACTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=99911.000000 s hg38.chr4_KI270785v1_alt 40386 35 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGGA s panTro4.chr4 190311969 35 + 193495092 CATATGCATGAGGCAGGCGACATGCGAGTGCTGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 35 + 198332218 CACATGTAAGAGGCAGGTGACTTGCGAGTGCTGGA i ponAbe2.chr4 C 0 I 236 s nomLeu3.chr7b 111249390 35 + 115148730 CACATGGATGAGGCAGGTGACATGCAAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 35 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 35 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 35 + 178775436 CACATGCATGAGGCAGGTGACATGCAAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847311 35 + 135778131 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 35 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=111828.000000 s hg38.chr4_KI270785v1_alt 40421 41 + 119912 GAGGAACCCCGGACGCCACCATTTCACATGAA-GAGGCAGGC s panTro4.chr4 190312004 42 + 193495092 GAGGAACCCCGGACGCCACCATTTCATATGCATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278340 42 + 198332218 GAGGAACCCTGGACGCCACCATTTCACATGTAAGAGGCAGGC i ponAbe2.chr4 I 236 C 0 s nomLeu3.chr7b 111249425 42 + 115148730 GAGGAACCCCGGAGGCCACCATTTCACATGGATGAGGCAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 41 + 184069350 GAGGAACCTCGGACGCCACCTTTTCACATGGG-GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389168 41 + 189454096 GAGGAACCTCGGACGCCACCTTTTCACATGGG-GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004155 41 + 178775436 GAGGAACCCCGGATGCCACCATTTCACATGGG-GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847346 41 + 135778131 GAGGAACCCCGGACGCCACCATTTCACATGGG-GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 41 - 190850796 GAGGAACCCTGGACACCACCATTTCCCATGGG-GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=125434.000000 s hg38.chr4_KI270785v1_alt 40462 41 + 119912 GACATGCGTGTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190312046 41 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278382 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249467 41 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004196 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=19054.000000 s hg38.chr4_KI270785v1_alt 40503 7 + 119912 CACATGG s panTro4.chr4 190312087 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249508 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004237 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=119349.000000 s hg38.chr4_KI270785v1_alt 40510 42 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGAT s panTro4.chr4 190312094 42 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 42 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249515 42 + 115148730 ATGAGGCGGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 42 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389257 42 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004244 42 + 178775436 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGAT i papAnu2.chr5 C 0 T 99 s chlSab2.chr7 132847435 42 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 42 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=35492.000000 s hg38.chr4_KI270785v1_alt 40552 18 + 119912 GCCACCATTTCACATG-AA s panTro4.chr4 190312136 18 + 193495092 GCCACCATTTCACATG-CA i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278472 18 + 198332218 GCCACCATTTCACATG-GA i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249557 18 + 115148730 GCCACCATTTCACATG-GG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051913 18 + 184069350 GCCACCTTTTCACATG-GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389299 19 + 189454096 GCCACCATTTCACATGCAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847477 18 + 135778131 GCCACCATTTCACATG-GA i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231832 18 - 190850796 ACCACCATTTCCCATG-GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004286 99 + 178775436 T a score=26371.000000 s hg38.chr4_KI270785v1_alt 40570 9 + 119912 GAGGCAGGC s panTro4.chr4 190312155 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278491 9 + 198332218 GAGGCAGGT i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249575 9 + 115148730 GAGGCTGGC i nomLeu3.chr7b C 0 T 353 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389318 9 + 189454096 GAGGCAGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004187 9 + 178775436 GAGGCAGGC i papAnu2.chr5 T 99 C 0 s chlSab2.chr7 132847496 9 + 135778131 GAGGCAGGT i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=134005.000000 s hg38.chr4_KI270785v1_alt 40579 46 + 119912 GACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190312164 46 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTTCATAT i panTro4.chr4 C 0 T 646 s ponAbe2.chr4 195278500 46 + 198332218 GACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249231 46 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b T 353 I 1 s rheMac3.chr5 181051940 46 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389327 46 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004196 46 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847505 46 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 46 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 T 58 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=14637.000000 s hg38.chr4_KI270785v1_alt 40625 8 + 119912 G-AAGAGGC s panTro4.chr4 190311564 8 + 193495092 G-AAGAGGC i panTro4.chr4 T 646 C 0 s ponAbe2.chr4 195278546 8 + 198332218 G-GGGAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249278 8 + 115148730 G-ATGAGGC i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051986 8 + 184069350 G-GGGAGGC i rheMac3.chr5 C 0 T 116 s macFas5.chr5 186389373 8 + 189454096 G-GGGAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004242 9 + 178775436 GCATGAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847551 9 + 135778131 GGATGAGGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 8 - 190850796 G-ATGAGGC i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=9690.000000 s hg38.chr4_KI270785v1_alt 40633 4 + 119912 AGGC s panTro4.chr4 190311572 4 + 193495092 AGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278554 4 + 198332218 AGGC i ponAbe2.chr4 C 0 T 117 s nomLeu3.chr7b 111249286 4 + 115148730 AGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051878 4 + 184069350 AGGT i rheMac3.chr5 T 116 C 0 s macFas5.chr5 186389381 4 + 189454096 TGGC i macFas5.chr5 C 0 T 117 s papAnu2.chr5 176004251 4 + 178775436 AGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847560 4 + 135778131 AGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231797 4 - 190850796 AGGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=127697.000000 s hg38.chr4_KI270785v1_alt 40637 46 + 119912 GACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190311576 45 + 193495092 GACATGCGAGTGCTGAGGAGAAACCC-GGACGCCACCATTTCACAT i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278441 46 + 198332218 GACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 T 117 I 1 s nomLeu3.chr7b 111249290 46 + 115148730 GACATGCAAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051882 46 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 I 2 s macFas5.chr5 186389268 46 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 T 117 T 174 s papAnu2.chr5 176004255 46 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132847564 46 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCGGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 I 2 s calJac3.chr3 188231801 46 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=1000.000000 s hg38.chr4_KI270785v1_alt 40683 1 + 119912 G s panTro4.chr4 190311622 1 + 193495092 G i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278488 1 + 198332218 G i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249337 1 + 115148730 G i nomLeu3.chr7b I 1 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847610 2 + 135778131 I e papAnu2.chr5 176004301 2 + 178775436 I e macFas5.chr5 186389314 174 + 189454096 T e rheMac3.chr5 181051928 2 + 184069350 I a score=-8932.000000 s hg38.chr4_KI270785v1_alt 40684 2 + 119912 AA- s panTro4.chr4 190311623 2 + 193495092 AA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278489 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249338 2 + 115148730 AT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051930 1 + 184069350 G-- i rheMac3.chr5 I 2 T 58 s macFas5.chr5 186389140 1 + 189454096 A-- i macFas5.chr5 T 174 I 1 s papAnu2.chr5 176004303 1 + 178775436 A-- i papAnu2.chr5 I 2 I 1 s chlSab2.chr7 132847612 1 + 135778131 A-- i chlSab2.chr7 I 2 I 1 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=158913.000000 s hg38.chr4_KI270785v1_alt 40686 55 + 119912 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190311625 55 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278491 55 + 198332218 GAGGCAGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249340 55 + 115148730 GAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGAAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051873 55 + 184069350 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 T 58 I 1 s macFas5.chr5 186389142 55 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 I 1 T 117 s papAnu2.chr5 176004305 55 + 178775436 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 I 1 I 1 s chlSab2.chr7 132847614 55 + 135778131 GAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACAT i chlSab2.chr7 I 1 I 1 s calJac3.chr3 188231792 55 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-4819.000000 s hg38.chr4_KI270785v1_alt 40741 3 + 119912 -GAA s panTro4.chr4 190311680 3 + 193495092 -GCA i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278546 3 + 198332218 -GGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249395 3 + 115148730 -GGA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051929 2 + 184069350 -GG- i rheMac3.chr5 I 1 T 117 s macFas5.chr5 186389080 2 + 189454096 -GA- i macFas5.chr5 T 117 I 1 s papAnu2.chr5 176004361 2 + 178775436 -GG- i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847670 2 + 135778131 -GG- i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231847 3 - 190850796 GGG- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=28197.000000 s hg38.chr4_KI270785v1_alt 40744 9 + 119912 GAGGCAGGC s panTro4.chr4 190311684 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278549 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 C 0 T 530 s nomLeu3.chr7b 111249399 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051814 9 + 184069350 GAGGCAGGC i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389083 9 + 189454096 GAGGCAGGC i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004363 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847672 9 + 135778131 GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=118083.000000 s hg38.chr4_KI270785v1_alt 40753 41 + 119912 GACATGCGTGTGCTGGAGAGGAACCCCGGACACCACCATTT s panTro4.chr4 190311693 41 + 193495092 GACATGCGAGTGCTAGAGAGGAATCCCGGATGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278028 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 T 530 C 0 s nomLeu3.chr7b 111249408 41 + 115148730 GACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051823 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004372 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847681 41 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16892.000000 s hg38.chr4_KI270785v1_alt 40794 6 + 119912 CACATG s panTro4.chr4 190311734 6 + 193495092 CACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249449 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004413 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847722 6 + 135778131 CACATG i chlSab2.chr7 C 0 T 411 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-4213.000000 s hg38.chr4_KI270785v1_alt 40800 1 + 119912 -C s panTro4.chr4 190311740 1 + 193495092 -C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278075 1 + 198332218 -T i ponAbe2.chr4 C 0 I 237 s nomLeu3.chr7b 111249455 1 + 115148730 -G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051870 1 + 184069350 -C i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389139 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004419 1 + 178775436 -C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847317 1 + 135778131 -G i chlSab2.chr7 T 411 C 0 s calJac3.chr3 188231789 1 - 190850796 G- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2384.000000 s hg38.chr4_KI270785v1_alt 40801 2 + 119912 AT s panTro4.chr4 190311741 2 + 193495092 AT i panTro4.chr4 C 0 I 235 s ponAbe2.chr4 195278313 1 + 198332218 A- i ponAbe2.chr4 I 237 C 0 s nomLeu3.chr7b 111249456 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 2 + 184069350 AT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004420 2 + 178775436 AT i papAnu2.chr5 C 0 I 174 s chlSab2.chr7 132847318 2 + 135778131 AT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 2 - 190850796 AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=132443.000000 s hg38.chr4_KI270785v1_alt 40803 56 + 119912 GAGACAGGCGACATGTGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCACATG s panTro4.chr4 190311978 56 + 193495092 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCATATG i panTro4.chr4 I 235 C 0 s ponAbe2.chr4 195278314 56 + 198332218 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 T 353 s nomLeu3.chr7b 111249458 56 + 115148730 GAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051873 56 + 184069350 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389142 56 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847320 56 + 135778131 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 56 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=15992.000000 s hg38.chr4_KI270785v1_alt 40859 11 + 119912 AA-GAGGCAGGC s panTro4.chr4 190312034 12 + 193495092 CATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278017 11 + 198332218 AA-GAGGCAGGT i ponAbe2.chr4 T 353 C 0 s nomLeu3.chr7b 111249514 12 + 115148730 GATGAGGCGGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 11 + 184069350 GG-GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 11 + 189454096 GG-GAGGCAGGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847376 11 + 135778131 GG-GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 11 - 190850796 GG-GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=95270.000000 s hg38.chr4_KI270785v1_alt 40870 41 + 119912 GACATGCGAGTGCTGAGGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190312046 41 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278028 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249526 41 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847387 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=14308.000000 s hg38.chr4_KI270785v1_alt 40911 7 + 119912 CACATGG s panTro4.chr4 190312087 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249567 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 T 413 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=128951.000000 s hg38.chr4_KI270785v1_alt 40918 58 + 119912 AAGAGGCAGGGGACATGCGAGTGCTGAGGAGGAACCCTGGATGCCACCATTTCACATG s panTro4.chr4 190312094 58 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278076 58 + 198332218 AAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTTACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249161 58 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b T 413 C 0 s rheMac3.chr5 181051871 58 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389257 58 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i macFas5.chr5 C 0 T 155 s chlSab2.chr7 132847435 58 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 58 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=806.000000 s hg38.chr4_KI270785v1_alt 40976 2 + 119912 AA s panTro4.chr4 190312152 2 + 193495092 CA i panTro4.chr4 C 0 T 411 s ponAbe2.chr4 195278134 2 + 198332218 GA i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249219 2 + 115148730 GA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132847493 2 + 135778131 GA i chlSab2.chr7 C 0 T 175 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I e macFas5.chr5 186389315 155 + 189454096 T a score=16452.000000 s hg38.chr4_KI270785v1_alt 40978 9 + 119912 GAGGCAGGC s panTro4.chr4 190311743 9 + 193495092 GAGGCAGGC i panTro4.chr4 T 411 C 0 s ponAbe2.chr4 195278137 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249222 9 + 115148730 GAGGCAGGC i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132847320 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 175 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I e macFas5.chr5 186389315 155 + 189454096 T a score=14778.000000 s hg38.chr4_KI270785v1_alt 40987 9 + 119912 GACATGCGA s panTro4.chr4 190311752 9 + 193495092 GACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278146 9 + 198332218 GACATGCGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249231 9 + 115148730 GACATGCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 9 + 184069350 GACATGCGA i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132847329 9 + 135778131 GACATGCGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 9 - 190850796 GGCATGACA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I e macFas5.chr5 186389315 155 + 189454096 T a score=39289.000000 s hg38.chr4_KI270785v1_alt 40996 17 + 119912 GTGCTGAGGAGAAACCC s panTro4.chr4 190311761 17 + 193495092 GTGCTGAGGAGAAACCC i panTro4.chr4 C 0 I 412 s ponAbe2.chr4 195278155 17 + 198332218 GTGCTGGAGAGGAACCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249240 17 + 115148730 GTGCTAGGGAGGAACCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051949 17 + 184069350 GTGCTGGAGAGGAACCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389160 17 + 189454096 GTGCTGGAGAGGAACCT i macFas5.chr5 T 155 C 0 s chlSab2.chr7 132847338 17 + 135778131 GTGCTGGAGAGGAACCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231810 17 - 190850796 GTGCTGGAGAGGAACCC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=45905.000000 s hg38.chr4_KI270785v1_alt 41013 21 + 119912 TGGATGCCACCATTTCACATG s panTro4.chr4 190312190 21 + 193495092 TGGACACCACCATTTCATATG i panTro4.chr4 I 412 C 0 s ponAbe2.chr4 195278172 21 + 198332218 TGGATGCCACCATTTCACATG i ponAbe2.chr4 C 0 T 117 s nomLeu3.chr7b 111249257 21 + 115148730 TGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051966 21 + 184069350 CGGATGCCACCATTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389177 21 + 189454096 CGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847355 21 + 135778131 CGGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231827 21 - 190850796 TGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=578.000000 s hg38.chr4_KI270785v1_alt 41034 2 + 119912 AA s panTro4.chr4 190312211 2 + 193495092 CA i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278076 2 + 198332218 AA i ponAbe2.chr4 T 117 C 0 s nomLeu3.chr7b 111249278 2 + 115148730 GA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051987 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847376 2 + 135778131 GG i chlSab2.chr7 C 0 I 59 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=13748.000000 s hg38.chr4_KI270785v1_alt 41036 5 + 119912 GAGGC s panTro4.chr4 190312214 5 + 193495092 GAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278078 5 + 198332218 GAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249281 5 + 115148730 GAGGC i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051989 5 + 184069350 GAGGC i rheMac3.chr5 C 0 T 175 s macFas5.chr5 186389200 5 + 189454096 GAGGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847437 5 + 135778131 GAGGC i chlSab2.chr7 I 59 C 0 s calJac3.chr3 188231850 5 - 190850796 GAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=7458.000000 s hg38.chr4_KI270785v1_alt 41041 4 + 119912 AGGC s panTro4.chr4 190312219 4 + 193495092 AGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278083 4 + 198332218 AGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249286 4 + 115148730 AGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051819 4 + 184069350 AGGC i rheMac3.chr5 T 175 C 0 s macFas5.chr5 186389205 4 + 189454096 AGGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847442 4 + 135778131 AGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231855 4 - 190850796 TGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=70118.000000 s hg38.chr4_KI270785v1_alt 41045 31 + 119912 GACATGCGAGTGCTGGAGAGGAACCCTGGAC s panTro4.chr4 190312223 31 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGAC i panTro4.chr4 C 0 T 354 s ponAbe2.chr4 195278087 31 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249290 31 + 115148730 GACATGCAAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051823 31 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 31 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847446 31 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCGGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 31 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=36588.000000 s hg38.chr4_KI270785v1_alt 41076 17 + 119912 GCCACCATTTCACGTGG s panTro4.chr4 190311900 17 + 193495092 GCCACCATTTCACAAGC i panTro4.chr4 T 354 C 0 s ponAbe2.chr4 195278118 17 + 198332218 GCCACCATTTTACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249321 17 + 115148730 GCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 17 + 184069350 GCCACCATTTCACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389240 17 + 189454096 GCCACCATTTCACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847477 17 + 135778131 GCCACCATTTCACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 17 - 190850796 ACCACCATTTCCCATGG i calJac3.chr3 C 0 T 66 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004422 174 + 178775436 I a score=-4428.000000 s hg38.chr4_KI270785v1_alt 41093 2 + 119912 AA s panTro4.chr4 190311917 2 + 193495092 AA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278135 2 + 198332218 AA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249338 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 1 + 184069350 A- i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389257 1 + 189454096 A- i macFas5.chr5 C 0 T 58 s papAnu2.chr5 176004596 1 + 178775436 A- i papAnu2.chr5 I 174 I 1 s chlSab2.chr7 132847494 1 + 135778131 A- i chlSab2.chr7 C 0 I 1 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T a score=77716.000000 s hg38.chr4_KI270785v1_alt 41095 32 + 119912 GAGGCAGGCGAAATGCGAGTGCTGGAGAGGAA s panTro4.chr4 190311919 32 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278137 32 + 198332218 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249340 32 + 115148730 GAGGCAGGCGACATGCGAGTGCTAGGGAGGAA i nomLeu3.chr7b C 0 T 350 s rheMac3.chr5 181051873 32 + 184069350 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAA i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389200 32 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAA i macFas5.chr5 T 58 C 0 s papAnu2.chr5 176004598 32 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAA i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847496 32 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAA i chlSab2.chr7 I 1 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T a score=3174.000000 s hg38.chr4_KI270785v1_alt 41127 4 + 119912 -CCCC s panTro4.chr4 190311951 3 + 193495092 -CCC- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278169 3 + 198332218 -CCC- i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181051905 4 + 184069350 CCTC- i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389232 4 + 189454096 CCCC- i macFas5.chr5 C 0 T 117 s papAnu2.chr5 176004630 4 + 178775436 CCCC- i papAnu2.chr5 C 0 T 196 s chlSab2.chr7 132847528 4 + 135778131 CCCC- i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T e nomLeu3.chr7b 111249372 350 + 115148730 T a score=546.000000 s hg38.chr4_KI270785v1_alt 41131 1 + 119912 T s panTro4.chr4 190311954 1 + 193495092 T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278172 1 + 198332218 T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249022 1 + 115148730 T i nomLeu3.chr7b T 350 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T e chlSab2.chr7 132847532 0 + 135778131 C e papAnu2.chr5 176004634 196 + 178775436 T e macFas5.chr5 186389236 117 + 189454096 T e rheMac3.chr5 181051909 59 + 184069350 T a score=4254.000000 s hg38.chr4_KI270785v1_alt 41132 4 + 119912 GGAT s panTro4.chr4 190311955 4 + 193495092 GGAC i panTro4.chr4 C 0 I 295 s ponAbe2.chr4 195278173 4 + 198332218 GGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249023 4 + 115148730 GAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 4 + 184069350 GGAC i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389119 4 + 189454096 GGAC i macFas5.chr5 T 117 C 0 s chlSab2.chr7 132847532 4 + 135778131 AGAC i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T e papAnu2.chr5 176004634 196 + 178775436 T a score=19269.000000 s hg38.chr4_KI270785v1_alt 41136 10 + 119912 GCCACCATTT s panTro4.chr4 190312254 10 + 193495092 GCCACCATTT i panTro4.chr4 I 295 C 0 s ponAbe2.chr4 195278177 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249027 10 + 115148730 GTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389123 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847536 10 + 135778131 GCCACCATTT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 66 - 190850796 T e papAnu2.chr5 176004634 196 + 178775436 T a score=142431.000000 s hg38.chr4_KI270785v1_alt 41146 64 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACAT s panTro4.chr4 190312264 64 + 193495092 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278187 64 + 198332218 CACATGTAAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 64 + 115148730 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 T 117 s rheMac3.chr5 181051864 64 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 64 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 C 0 T 117 s chlSab2.chr7 132847546 64 + 135778131 CACATGGATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCGGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 64 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 T 66 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=2100.000000 s hg38.chr4_KI270785v1_alt 41210 1 + 119912 G s panTro4.chr4 190312328 1 + 193495092 G i panTro4.chr4 C 0 T 295 s ponAbe2.chr4 195278251 1 + 198332218 G i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111248984 1 + 115148730 G i nomLeu3.chr7b T 117 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s chlSab2.chr7 132847610 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T e macFas5.chr5 186389197 117 + 189454096 T a score=53.000000 s hg38.chr4_KI270785v1_alt 41211 2 + 119912 AA s panTro4.chr4 190312034 2 + 193495092 CA i panTro4.chr4 T 295 I 1 s ponAbe2.chr4 195278253 2 + 198332218 AA i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111248985 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389080 2 + 189454096 GA i macFas5.chr5 T 117 I 1 s chlSab2.chr7 132847611 2 + 135778131 CA i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=22281.000000 s hg38.chr4_KI270785v1_alt 41213 9 + 119912 GAGGCAGGC s panTro4.chr4 190312037 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278255 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248987 9 + 115148730 GAGGCAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 9 + 184069350 GAGGCAGGC i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389083 9 + 189454096 GAGGCAGGC i macFas5.chr5 I 1 C 0 s chlSab2.chr7 132847614 9 + 135778131 GAGGCAGGT i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=66886.000000 s hg38.chr4_KI270785v1_alt 41222 30 + 119912 GACATGCGTGTGCTGGAGAGGAACCCTGGA s panTro4.chr4 190312046 30 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278264 30 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248996 30 + 115148730 GACATGCGAGTGCTAGGGAGGAATCCTGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051823 30 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 30 + 189454096 GACATGCGAGTGCTGGAGAGGAACCTCGGA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847623 30 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCAGA i chlSab2.chr7 C 0 T 353 s calJac3.chr3 188231801 30 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=25277.000000 s hg38.chr4_KI270785v1_alt 41252 11 + 119912 CGCCACCATTT s panTro4.chr4 190312076 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278294 11 + 198332218 CGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249026 11 + 115148730 GGTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051853 11 + 184069350 CGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389122 11 + 189454096 CGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847300 11 + 135778131 CGCCACCACTT i chlSab2.chr7 T 353 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=162302.000000 s hg38.chr4_KI270785v1_alt 41263 76 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATGAA-GAGGCAGGC s panTro4.chr4 190312087 77 + 193495092 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACATGCATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278305 77 + 198332218 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATGTAAGAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 76 + 115148730 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATGGG-GAGGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 76 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGGG-GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 76 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGGG-GAGGCAGGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847311 76 + 135778131 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGGG-GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 76 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGGG-GAGGCTGGC i calJac3.chr3 T 59 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=92345.000000 s hg38.chr4_KI270785v1_alt 41339 41 + 119912 GACATGCGAGTGCTGAGGAGGAACCCTGGATGCCACCATTT s panTro4.chr4 190312164 41 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278382 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249113 41 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847387 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=13709.000000 s hg38.chr4_KI270785v1_alt 41380 7 + 119912 CACATGG s panTro4.chr4 190312205 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249154 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=94749.000000 s hg38.chr4_KI270785v1_alt 41387 42 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCTGGAT s panTro4.chr4 190312212 42 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 42 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249161 42 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 42 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389257 42 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847435 42 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGAT i chlSab2.chr7 C 0 I 59 s calJac3.chr3 188231790 42 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=24325.000000 s hg38.chr4_KI270785v1_alt 41429 10 + 119912 GCCACCATTT s panTro4.chr4 190312254 10 + 193495092 GCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278472 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249203 10 + 115148730 GCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051913 10 + 184069350 GCCACCTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389299 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847536 10 + 135778131 GCCACCATTT i chlSab2.chr7 I 59 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=8925.000000 s hg38.chr4_KI270785v1_alt 41439 4 + 119912 CACA s panTro4.chr4 190312264 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278482 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249213 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051923 4 + 184069350 CACA i rheMac3.chr5 C 0 T 118 s macFas5.chr5 186389309 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847546 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=46230.000000 s hg38.chr4_KI270785v1_alt 41443 21 + 119912 TGGAAGAGGCAGGCGACATGC s panTro4.chr4 190312268 21 + 193495092 TGGAAGAGGCAGGCGACATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278486 21 + 198332218 TGGAAGAGGCAGGTGACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249217 21 + 115148730 TGGATGAGGCAGGCGACATGC i nomLeu3.chr7b C 0 I 118 s rheMac3.chr5 181051809 21 + 184069350 TGGATGAGGCAGGCGACATGC i rheMac3.chr5 T 118 C 0 s macFas5.chr5 186389313 21 + 189454096 TGCATGAGGCAGGTGACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847550 21 + 135778131 TGGATGAGGCAGGTGACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 21 - 190850796 TGGATGAGGCAGGTGGCATGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004634 196 + 178775436 T a score=55241.000000 s hg38.chr4_KI270785v1_alt 41464 20 + 119912 GAGTGCTGTGGAGGAACCCT s panTro4.chr4 190312289 20 + 193495092 GAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 T 531 s ponAbe2.chr4 195278507 20 + 198332218 GAGTGCTGGGGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249356 20 + 115148730 GAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b I 118 C 0 s rheMac3.chr5 181051830 20 + 184069350 GAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389334 20 + 189454096 GAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004438 20 + 178775436 GAGTGCTGGAGAGGAGCCCC i papAnu2.chr5 T 196 C 0 s chlSab2.chr7 132847571 20 + 135778131 GAGTGCTAGAGAGGAACCCG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231808 20 - 190850796 CAGTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=40153.000000 s hg38.chr4_KI270785v1_alt 41484 14 + 119912 GGACGCCACCATTT s panTro4.chr4 190311778 14 + 193495092 GGACGCCACCATTT i panTro4.chr4 T 531 C 0 s ponAbe2.chr4 195278527 14 + 198332218 GGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249376 14 + 115148730 GAAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 14 + 184069350 GGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389354 14 + 189454096 GGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004458 14 + 178775436 AGATGCCAGCATTT i papAnu2.chr5 C 0 T 469 s chlSab2.chr7 132847591 14 + 135778131 GGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 14 - 190850796 GGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17536.000000 s hg38.chr4_KI270785v1_alt 41498 7 + 119912 CACATGG s panTro4.chr4 190311792 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278541 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 T 59 s nomLeu3.chr7b 111249390 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389368 7 + 189454096 CACATGG i macFas5.chr5 C 0 T 235 s papAnu2.chr5 176004003 7 + 178775436 CATGTGG i papAnu2.chr5 T 469 C 0 s chlSab2.chr7 132847605 7 + 135778131 CACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=159647.000000 s hg38.chr4_KI270785v1_alt 41505 57 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCACAT s panTro4.chr4 190311799 57 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278489 57 + 198332218 AAGAGGCAGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 T 59 C 0 s nomLeu3.chr7b 111249397 57 + 115148730 ATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 57 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 57 + 189454096 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 T 235 T 117 s papAnu2.chr5 176004010 57 + 178775436 ACGAGGCAGGCGACATGCGCGTGCTGGAGAGGAACCTCGGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847612 57 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 57 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3600.000000 s hg38.chr4_KI270785v1_alt 41562 1 + 119912 G s panTro4.chr4 190311856 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278546 1 + 198332218 G i ponAbe2.chr4 C 0 T 353 s nomLeu3.chr7b 111249454 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 1 + 189454096 G i macFas5.chr5 T 117 C 0 s papAnu2.chr5 176004067 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847669 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=21106.000000 s hg38.chr4_KI270785v1_alt 41563 11 + 119912 AA-GAGGCAGGC s panTro4.chr4 190311857 12 + 193495092 CATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 11 + 198332218 AA-GAGGCAGGT i ponAbe2.chr4 T 353 C 0 s nomLeu3.chr7b 111249455 12 + 115148730 GATGAGGCAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 11 + 184069350 -GGGAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389081 11 + 189454096 -ATGAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004068 11 + 178775436 -GGGAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847670 11 + 135778131 -GGGAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 11 - 190850796 -GGGAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=80293.000000 s hg38.chr4_KI270785v1_alt 41574 26 + 119912 GACATGCGAGTGCTGGAGAGGAACCC s panTro4.chr4 190311869 26 + 193495092 GACATGCGAGTGCTAGAGAGGAACCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278205 26 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249467 26 + 115148730 GACATGCGAGTGCTGGGGAGGAACCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 26 + 184069350 GACATGCGAGTGCTGGAGAGGAACCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 26 + 189454096 GACATGCGAGTGCTGGAGAGGAACCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004079 26 + 178775436 GACATGCGAGTGCTGGAGAGGAACCC i papAnu2.chr5 C 0 I 469 s chlSab2.chr7 132847681 26 + 135778131 GACATGCGAGTGCTAGAGAGGAACCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 26 - 190850796 GGCATGACAGTGCTGGAGAGGAACCC i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=58793.000000 s hg38.chr4_KI270785v1_alt 41600 22 + 119912 CGGACGCCACCATTTCACATGG s panTro4.chr4 190311895 22 + 193495092 CGGACGCCACCATTTCACAAGC i panTro4.chr4 C 0 I 118 s ponAbe2.chr4 195278231 22 + 198332218 TGGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 I 59 s nomLeu3.chr7b 111249493 22 + 115148730 CGGACGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051966 22 + 184069350 CGGATGCCACCATTTCACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389118 22 + 189454096 CGGACGCCACCATTTCACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004574 22 + 178775436 CAGATGCCAGCATTTCACATGC i papAnu2.chr5 I 469 C 0 s chlSab2.chr7 132847707 22 + 135778131 CAGACGCCACCTTTTCACATGG i chlSab2.chr7 C 0 T 315 s calJac3.chr3 188231827 22 - 190850796 TGGACACCACCATTTCCCATGG i calJac3.chr3 C 0 T 54 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6443.000000 s hg38.chr4_KI270785v1_alt 41622 5 + 119912 AAGAC s panTro4.chr4 190312035 5 + 193495092 ATGAG i panTro4.chr4 I 118 C 0 s ponAbe2.chr4 195278312 5 + 198332218 AAGAG i ponAbe2.chr4 I 59 C 0 s nomLeu3.chr7b 111249515 5 + 115148730 ATGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 5 + 184069350 ATGAG i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389140 5 + 189454096 ATGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004596 5 + 178775436 ATGAG i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231849 54 - 190850796 T e chlSab2.chr7 132847729 315 + 135778131 T a score=78270.000000 s hg38.chr4_KI270785v1_alt 41627 33 + 119912 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCC s panTro4.chr4 190312040 33 + 193495092 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278317 33 + 198332218 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249520 33 + 115148730 GCGGGTGACATGCGAGTGCTGGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051876 33 + 184069350 GCAGGTGACATGCGAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389145 33 + 189454096 GCAGGTGACATGCGAGTGCTGGAGAGGAACCTC i macFas5.chr5 C 0 T 38 s papAnu2.chr5 176004601 33 + 178775436 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231795 33 - 190850796 GCAGGTGGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 T 54 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847729 315 + 135778131 T a score=42961.000000 s hg38.chr4_KI270785v1_alt 41660 19 + 119912 GGGCGCCACCATTTCACAT s panTro4.chr4 190312073 19 + 193495092 GGACGCCACCATTTCACAT i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278350 19 + 198332218 GGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249553 19 + 115148730 GGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 19 + 184069350 GGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176004634 19 + 178775436 GGATGCCACCATTTCATAT i papAnu2.chr5 C 0 T 644 s chlSab2.chr7 132847414 19 + 135778131 GGACGCCACCATTTCACAT i chlSab2.chr7 T 315 C 0 s calJac3.chr3 188231828 19 - 190850796 GGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389178 38 + 189454096 T a score=1302.000000 s hg38.chr4_KI270785v1_alt 41679 1 + 119912 G s panTro4.chr4 190312093 1 + 193495092 G i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278370 1 + 198332218 T i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249572 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176004009 1 + 178775436 G i papAnu2.chr5 T 644 C 0 s chlSab2.chr7 132847433 1 + 135778131 G i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389178 38 + 189454096 T a score=24447.000000 s hg38.chr4_KI270785v1_alt 41680 10 + 119912 AAGAGGCAGG s panTro4.chr4 190312094 10 + 193495092 AAGAGGCAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278371 10 + 198332218 AAGAGGCAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249573 10 + 115148730 GGGAGGCTGG i nomLeu3.chr7b C 0 T 117 s rheMac3.chr5 181051929 10 + 184069350 GGGAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 10 + 189454096 ATGAGGCAGG i macFas5.chr5 T 38 C 0 s papAnu2.chr5 176004010 10 + 178775436 ACGAGGCAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847435 10 + 135778131 ATGAGGCAGG i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231848 10 - 190850796 GGGAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=45726.000000 s hg38.chr4_KI270785v1_alt 41690 18 + 119912 GGACATGCGAGTGCTGAG s panTro4.chr4 190312104 18 + 193495092 CGACATGCGAGTGCTGAG i panTro4.chr4 C 0 T 118 s ponAbe2.chr4 195278381 18 + 198332218 CGACTTGCGAGTGCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249466 18 + 115148730 TGACATGCGAGTGCTGGG i nomLeu3.chr7b T 117 C 0 s rheMac3.chr5 181051939 18 + 184069350 CGACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389150 18 + 189454096 TGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004020 18 + 178775436 CGACATGCGCGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847445 18 + 135778131 TGACATGCGAGTGCTAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 18 - 190850796 TGGCATGACAGTGCTGGA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=86217.000000 s hg38.chr4_KI270785v1_alt 41708 29 + 119912 GAGGAACCCCGGGCGCCACCATTTCACAT s panTro4.chr4 190312004 29 + 193495092 GAGGAACCCCGGACGCCACCATTTCATAT i panTro4.chr4 T 118 T 173 s ponAbe2.chr4 195278399 29 + 198332218 GAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 T 234 s nomLeu3.chr7b 111249484 29 + 115148730 GAGGAACCCCGGACGCCACCATTTCACAT i nomLeu3.chr7b C 0 T 529 s rheMac3.chr5 181051957 29 + 184069350 GAGGAACCCCGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389168 29 + 189454096 GAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 C 0 T 117 s papAnu2.chr5 176004038 29 + 178775436 GAGGAACCTCGGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847463 29 + 135778131 GAGGAACCCCGGATGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 29 - 190850796 GAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2100.000000 s hg38.chr4_KI270785v1_alt 41737 1 + 119912 G s nomLeu3.chr7b 111248984 1 + 115148730 G i nomLeu3.chr7b T 529 C 0 s rheMac3.chr5 181051987 1 + 184069350 G i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389080 1 + 189454096 G i macFas5.chr5 T 117 C 0 s papAnu2.chr5 176004068 1 + 178775436 G i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847492 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278428 234 + 198332218 T e panTro4.chr4 190312033 173 + 193495092 T a score=-2442.000000 s hg38.chr4_KI270785v1_alt 41738 2 + 119912 AA- s ponAbe2.chr4 195278194 2 + 198332218 AA- i ponAbe2.chr4 T 234 C 0 s nomLeu3.chr7b 111248985 2 + 115148730 AA- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051988 1 + 184069350 -G- i rheMac3.chr5 C 0 T 175 s macFas5.chr5 186389081 1 + 189454096 -A- i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004069 1 + 178775436 -G- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847493 1 + 135778131 -G- i chlSab2.chr7 C 0 I 61 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312033 173 + 193495092 T a score=116397.000000 s hg38.chr4_KI270785v1_alt 41740 39 + 119912 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGA s panTro4.chr4 190311860 39 + 193495092 GAGGCAGGCGACATGCGAGTGCTAGAGAGGAACCCCGGA i panTro4.chr4 T 173 C 0 s ponAbe2.chr4 195278196 39 + 198332218 GAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248987 39 + 115148730 GAGGCAGGCGACATGCGAGTGCTAGGGAGGAATCCTGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 39 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGA i rheMac3.chr5 T 175 C 0 s macFas5.chr5 186389083 39 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGA i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004070 39 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847555 39 + 135778131 GAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCGGGA i chlSab2.chr7 I 61 T 294 s calJac3.chr3 188231792 39 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=32202.000000 s hg38.chr4_KI270785v1_alt 41779 11 + 119912 CGCCACCATTT s panTro4.chr4 190311899 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278235 11 + 198332218 CGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249026 11 + 115148730 GGTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051853 11 + 184069350 CGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389122 11 + 189454096 CGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004109 11 + 178775436 TGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847300 11 + 135778131 CGCCACCACTT i chlSab2.chr7 T 294 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=72713.000000 s hg38.chr4_KI270785v1_alt 41790 27 + 119912 CACATGGAAGAGGCAGGGGACATGCGA s panTro4.chr4 190311910 27 + 193495092 CACAAGCAAGAGGCAGGCGACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278246 27 + 198332218 CACATGGAAGAGGCAGGCGACATGCGA i ponAbe2.chr4 C 0 I 236 s nomLeu3.chr7b 111249037 27 + 115148730 CACATGGATGAGGCAGGTGACATGCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 27 + 184069350 CACATGCATGAGGCAGGTGACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 27 + 189454096 CACATGCATGAGGCAGGTGACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 27 + 178775436 CACATGCATGAGGCAGGTGACATGCAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847311 27 + 135778131 CACATGGATGAGGCAGGTGACATGCGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 27 - 190850796 CATGTGGATGAGGCAGGTGGCATGACA i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=112961.000000 s hg38.chr4_KI270785v1_alt 41817 38 + 119912 GTGCTGAGGAGGAACCCCGGACGCCACCATTTCACATG s panTro4.chr4 190311937 38 + 193495092 GTGCTGAGGAGGAACCCTGGACACCACCATTTCATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278509 38 + 198332218 GTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 I 236 T 235 s nomLeu3.chr7b 111249064 38 + 115148730 GTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051891 38 + 184069350 GTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389160 38 + 189454096 GTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004147 38 + 178775436 GTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847338 38 + 135778131 GTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231810 38 - 190850796 GTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=24413.000000 s hg38.chr4_KI270785v1_alt 41855 11 + 119912 AA-GAGGCAGGC s panTro4.chr4 190311975 12 + 193495092 CATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278312 11 + 198332218 AA-GAGGCAGGC i ponAbe2.chr4 T 235 C 0 s nomLeu3.chr7b 111249102 11 + 115148730 GG-GAGGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 11 + 184069350 GG-GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 11 + 189454096 GG-GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004185 11 + 178775436 GG-GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847376 11 + 135778131 GG-GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 11 - 190850796 GG-GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=47844.000000 s hg38.chr4_KI270785v1_alt 41866 16 + 119912 GACATGCGAGTGCTGG s panTro4.chr4 190311987 16 + 193495092 GACATGCGAGTGCTGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278323 16 + 198332218 GACATGCGAGTGCTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249113 16 + 115148730 GACATGCGAGTGCTAG i nomLeu3.chr7b C 0 I 177 s rheMac3.chr5 181051940 16 + 184069350 GACATGCGAGTGCTGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 16 + 189454096 GACATGCGAGTGCTGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004196 16 + 178775436 GACATGCGAGTGCTGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 16 + 135778131 GACATGTCAGTGCTGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 16 - 190850796 GGCATGACAGTGCTGG i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=78592.000000 s hg38.chr4_KI270785v1_alt 41882 25 + 119912 AGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190312003 25 + 193495092 AGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278339 25 + 198332218 AGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249306 25 + 115148730 GGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b I 177 C 0 s rheMac3.chr5 181051956 25 + 184069350 AGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389225 25 + 189454096 AGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004212 25 + 178775436 AGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847403 25 + 135778131 AGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231817 25 - 190850796 AGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16571.000000 s hg38.chr4_KI270785v1_alt 41907 7 + 119912 CACATGG s panTro4.chr4 190312028 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278364 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249331 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 171 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 I 2 s papAnu2.chr5 176004237 7 + 178775436 CACATGC i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 I 2 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6209.000000 s hg38.chr4_KI270785v1_alt 41914 5 + 119912 AAGAC s panTro4.chr4 190312035 5 + 193495092 ATGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278371 5 + 198332218 AAGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249338 5 + 115148730 ATGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389259 3 + 189454096 --GAG i macFas5.chr5 I 2 C 0 s papAnu2.chr5 176004246 3 + 178775436 --GAG i papAnu2.chr5 I 2 C 0 s chlSab2.chr7 132847437 3 + 135778131 --GAG i chlSab2.chr7 I 2 C 0 s calJac3.chr3 188231790 5 - 190850796 ATGAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051988 171 + 184069350 T a score=138453.000000 s hg38.chr4_KI270785v1_alt 41919 47 + 119912 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGGCGCCACCATTT s panTro4.chr4 190312040 47 + 193495092 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278376 47 + 198332218 GCAGGCGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249343 47 + 115148730 GCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGAAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051817 47 + 184069350 GCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 T 171 C 0 s macFas5.chr5 186389262 47 + 189454096 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004249 47 + 178775436 GCAGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847440 47 + 135778131 GCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231795 47 - 190850796 GCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=18604.000000 s hg38.chr4_KI270785v1_alt 41966 6 + 119912 CACATG s panTro4.chr4 190312087 6 + 193495092 CACATG i panTro4.chr4 C 0 I 59 s ponAbe2.chr4 195278423 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249390 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004296 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847487 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=163898.000000 s hg38.chr4_KI270785v1_alt 41972 58 + 119912 GAAGAGGCAGGGGACATGTGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCACAT s panTro4.chr4 190312152 58 + 193495092 CATGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACACCACCATTTCATAT i panTro4.chr4 I 59 C 0 s ponAbe2.chr4 195278429 58 + 198332218 GAAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 T 105 s nomLeu3.chr7b 111249396 58 + 115148730 GATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051870 58 + 184069350 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389315 58 + 189454096 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004302 58 + 178775436 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847493 58 + 135778131 GATGAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 58 - 190850796 GATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3900.000000 s hg38.chr4_KI270785v1_alt 42030 3 + 119912 GAA s panTro4.chr4 190312210 3 + 193495092 GCA i panTro4.chr4 C 0 I 1 s nomLeu3.chr7b 111249454 3 + 115148730 GGA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051928 3 + 184069350 GGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389373 3 + 189454096 GGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004360 3 + 178775436 GGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847551 3 + 135778131 GGA i chlSab2.chr7 C 0 I 60 s calJac3.chr3 188231847 3 - 190850796 GGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 105 + 198332218 T a score=20547.000000 s hg38.chr4_KI270785v1_alt 42033 9 + 119912 GAGGCAGGC s panTro4.chr4 190312214 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s nomLeu3.chr7b 111249458 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389376 9 + 189454096 GAGGCTGGC i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004363 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847614 9 + 135778131 GAGGCAGGT i chlSab2.chr7 I 60 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 105 + 198332218 T a score=48273.000000 s hg38.chr4_KI270785v1_alt 42042 17 + 119912 GACATGCGAGTGCTGTG s panTro4.chr4 190312223 17 + 193495092 GACATGCGAGTGCTGGA i panTro4.chr4 C 0 T 236 s ponAbe2.chr4 195278382 17 + 198332218 GACTTGCGAGTGCTGGA i ponAbe2.chr4 T 105 C 0 s nomLeu3.chr7b 111249467 17 + 115148730 GACATGCGAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 17 + 184069350 GACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 17 + 189454096 GACATGCGAGTGCTGGA i macFas5.chr5 T 176 C 0 s papAnu2.chr5 176004372 17 + 178775436 GACATGCGAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847623 17 + 135778131 GACATGCGAGTGCTAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 17 - 190850796 GGCATGACAGTGCTGGA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=75448.000000 s hg38.chr4_KI270785v1_alt 42059 24 + 119912 GAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190312004 24 + 193495092 GAGGAACCCCGGACGCCACCATTT i panTro4.chr4 T 236 C 0 s ponAbe2.chr4 195278399 24 + 198332218 GAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249484 24 + 115148730 GAGGAACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051957 24 + 184069350 GAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389226 24 + 189454096 GAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004389 24 + 178775436 GAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847640 24 + 135778131 GAGGAACCCCAGACGCCACCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 24 - 190850796 GAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17359.000000 s hg38.chr4_KI270785v1_alt 42083 7 + 119912 CACATGG s panTro4.chr4 190312028 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249508 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 171 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 I 2 s papAnu2.chr5 176004413 7 + 178775436 CACATGC i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132847664 7 + 135778131 CACATGG i chlSab2.chr7 C 0 T 234 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6209.000000 s hg38.chr4_KI270785v1_alt 42090 5 + 119912 AAGAC s panTro4.chr4 190312035 5 + 193495092 ATGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 5 + 198332218 AAGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249515 5 + 115148730 ATGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389259 3 + 189454096 --GAG i macFas5.chr5 I 2 C 0 s papAnu2.chr5 176004422 3 + 178775436 --GAG i papAnu2.chr5 I 2 C 0 s chlSab2.chr7 132847437 3 + 135778131 --GAG i chlSab2.chr7 T 234 C 0 s calJac3.chr3 188231790 5 - 190850796 ATGAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051988 171 + 184069350 T a score=107757.000000 s hg38.chr4_KI270785v1_alt 42095 36 + 119912 GCAGGCGACATGTGAGTGCTGGAGAGGAACCCCGGG s panTro4.chr4 190312040 36 + 193495092 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278435 36 + 198332218 GCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGA i ponAbe2.chr4 C 0 T 295 s nomLeu3.chr7b 111249520 36 + 115148730 GCGGGTGACATGCGAGTGCTGGGGAGGAACCCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051817 36 + 184069350 GCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGA i rheMac3.chr5 T 171 C 0 s macFas5.chr5 186389262 36 + 189454096 GCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004425 36 + 178775436 GCAGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847440 36 + 135778131 GCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231795 36 - 190850796 GCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=31226.000000 s hg38.chr4_KI270785v1_alt 42131 11 + 119912 CGCCACCATTT s panTro4.chr4 190312076 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278176 11 + 198332218 TGCCACCATTT i ponAbe2.chr4 T 295 C 0 s nomLeu3.chr7b 111249556 11 + 115148730 GGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051853 11 + 184069350 CGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389298 11 + 189454096 TGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004461 11 + 178775436 TGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847476 11 + 135778131 TGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17366.000000 s hg38.chr4_KI270785v1_alt 42142 7 + 119912 CACATGG s panTro4.chr4 190312087 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278187 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249567 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 T 354 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004472 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847487 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=161506.000000 s hg38.chr4_KI270785v1_alt 42149 57 + 119912 AAGAGGCAGGGGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190312094 57 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACAT i panTro4.chr4 C 0 T 58 s ponAbe2.chr4 195278194 57 + 198332218 AAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 I 189 s nomLeu3.chr7b 111249220 57 + 115148730 ATGAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b T 354 C 0 s rheMac3.chr5 181051871 57 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389316 57 + 189454096 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 T 293 s papAnu2.chr5 176004479 57 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847494 57 + 135778131 ATGAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 57 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2800.000000 s hg38.chr4_KI270785v1_alt 42206 1 + 119912 G s panTro4.chr4 190312093 1 + 193495092 G i panTro4.chr4 T 58 T 177 s nomLeu3.chr7b 111249277 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 1 + 184069350 G i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389080 1 + 189454096 G i macFas5.chr5 T 293 C 0 s papAnu2.chr5 176004537 1 + 178775436 G i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847551 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278251 189 + 198332218 I a score=237.000000 s hg38.chr4_KI270785v1_alt 42207 2 + 119912 AA s panTro4.chr4 190311917 2 + 193495092 AA i panTro4.chr4 T 177 C 0 s nomLeu3.chr7b 111249278 2 + 115148730 GA i nomLeu3.chr7b C 0 I 237 s rheMac3.chr5 181051930 1 + 184069350 -G i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389081 1 + 189454096 -A i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004538 1 + 178775436 -G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847552 1 + 135778131 -G i chlSab2.chr7 C 0 T 116 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278251 189 + 198332218 I a score=19675.000000 s hg38.chr4_KI270785v1_alt 42209 8 + 119912 GAGGCAGG s panTro4.chr4 190311919 8 + 193495092 GAGGCAGG i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111249517 8 + 115148730 GAGGCGGG i nomLeu3.chr7b I 237 C 0 s rheMac3.chr5 181051814 8 + 184069350 GAGGCAGG i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389083 8 + 189454096 GAGGCAGG i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004539 8 + 178775436 GAGGCAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847437 8 + 135778131 GAGGCAGG i chlSab2.chr7 T 116 C 0 s calJac3.chr3 188231850 8 - 190850796 GAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278251 189 + 198332218 I a score=88176.000000 s hg38.chr4_KI270785v1_alt 42217 32 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCTGGAC s panTro4.chr4 190311927 32 + 193495092 CGACATGCGAGTGCTGAGGAGGAACCCTGGAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278440 32 + 198332218 CGACATGCGAGTGCTGGGGAGGAACCCTGGAC i ponAbe2.chr4 I 189 C 0 s nomLeu3.chr7b 111249525 32 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051822 32 + 184069350 CGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389091 32 + 189454096 CGACATGCGAGTGCTGGAGAGGAACCTCGGAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004547 32 + 178775436 CGACATGCGAGTGCTGGAGAGGAGCCCCAGAT i papAnu2.chr5 C 0 T 293 s chlSab2.chr7 132847445 32 + 135778131 TGACATGCGAGTGCTAGAGAGGAACCCCGGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 32 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=30737.000000 s hg38.chr4_KI270785v1_alt 42249 10 + 119912 GCCACCATTT s panTro4.chr4 190311959 10 + 193495092 ACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278472 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249557 10 + 115148730 GCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389123 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004286 10 + 178775436 GCCAGCATTT i papAnu2.chr5 T 293 C 0 s chlSab2.chr7 132847477 10 + 135778131 GCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17809.000000 s hg38.chr4_KI270785v1_alt 42259 6 + 119912 CACATG s panTro4.chr4 190311969 6 + 193495092 CATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278482 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249567 6 + 115148730 CACATG i nomLeu3.chr7b C 0 T 530 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004296 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847487 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3940.000000 s hg38.chr4_KI270785v1_alt 42265 3 + 119912 CAT s panTro4.chr4 190311975 3 + 193495092 CAT i panTro4.chr4 C 0 I 177 s ponAbe2.chr4 195278488 3 + 198332218 GAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249043 3 + 115148730 GAT i nomLeu3.chr7b T 530 C 0 s rheMac3.chr5 181051870 3 + 184069350 CAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389139 3 + 189454096 CAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004302 3 + 178775436 CAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847493 3 + 135778131 GAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 3 - 190850796 GAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=74739.000000 s hg38.chr4_KI270785v1_alt 42268 26 + 119912 GAGACAGGCGACATGTGAGTGCTGAG s panTro4.chr4 190312155 26 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAG i panTro4.chr4 I 177 C 0 s ponAbe2.chr4 195278491 26 + 198332218 GAGGCAGGTGACATGGGAGTGCTGGG i ponAbe2.chr4 C 0 T 413 s nomLeu3.chr7b 111249046 26 + 115148730 GAGGCAGGTGACATGCGAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051873 26 + 184069350 GAGGCAGGTGACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389142 26 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004305 26 + 178775436 GAGGCAGGTGACATGCGAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847496 26 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 26 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=39939.000000 s hg38.chr4_KI270785v1_alt 42294 13 + 119912 GAGGAACCCCGGA s panTro4.chr4 190312181 13 + 193495092 GAGGAACCCTGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278104 13 + 198332218 GAGGAACCCTGGA i ponAbe2.chr4 T 413 C 0 s nomLeu3.chr7b 111249072 13 + 115148730 GAGGAACCCTGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 13 + 184069350 GAGGAACCTCGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389168 13 + 189454096 GAGGAACCTCGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004331 13 + 178775436 GAGGAACCCCGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847522 13 + 135778131 GAGGAACCCCAGA i chlSab2.chr7 C 0 T 39 s calJac3.chr3 188231818 13 - 190850796 GAGGAACCCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=33016.000000 s hg38.chr4_KI270785v1_alt 42307 16 + 119912 CGCCACCATTTCACAT s panTro4.chr4 190312194 16 + 193495092 CACCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278117 16 + 198332218 CGCCACCATTTTACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249085 16 + 115148730 GGCCACCATTTCACAT i nomLeu3.chr7b C 0 I 357 s rheMac3.chr5 181051912 16 + 184069350 CGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389181 16 + 189454096 CGCCACCTTTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004344 16 + 178775436 TGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231831 16 - 190850796 CACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847535 39 + 135778131 T a score=2100.000000 s hg38.chr4_KI270785v1_alt 42323 1 + 119912 G s panTro4.chr4 190312210 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278133 1 + 198332218 G i ponAbe2.chr4 C 0 I 119 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389197 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004360 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847535 39 + 135778131 T e nomLeu3.chr7b 111249101 357 + 115148730 I a score=-2576.000000 s hg38.chr4_KI270785v1_alt 42324 2 + 119912 AA- s panTro4.chr4 190312211 2 + 193495092 CA- i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278253 2 + 198332218 AA- i ponAbe2.chr4 I 119 C 0 s rheMac3.chr5 181051929 1 + 184069350 -G- i rheMac3.chr5 C 0 T 116 s macFas5.chr5 186389198 1 + 189454096 -G- i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004361 1 + 178775436 -G- i papAnu2.chr5 C 0 I 1 s calJac3.chr3 188231848 2 - 190850796 -GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847535 39 + 135778131 T e nomLeu3.chr7b 111249101 357 + 115148730 I a score=28197.000000 s hg38.chr4_KI270785v1_alt 42326 9 + 119912 GAGGCAGGC s panTro4.chr4 190312214 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278255 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249458 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b I 357 C 0 s rheMac3.chr5 181051814 9 + 184069350 GAGGCAGGC i rheMac3.chr5 T 116 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004363 9 + 178775436 GAGGCAGGC i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847496 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 39 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=127846.000000 s hg38.chr4_KI270785v1_alt 42335 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190312223 41 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278264 41 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249467 41 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051823 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004372 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847505 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=18604.000000 s hg38.chr4_KI270785v1_alt 42376 6 + 119912 CACATG s panTro4.chr4 190312264 6 + 193495092 CACATG i panTro4.chr4 C 0 T 236 s ponAbe2.chr4 195278305 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249508 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389250 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004413 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847546 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=111191.000000 s hg38.chr4_KI270785v1_alt 42382 39 + 119912 GAAGAGGCAGGGGACATGCGAGTGCTGGAGAGGAACCCC s panTro4.chr4 190312034 39 + 193495092 CATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i panTro4.chr4 T 236 C 0 s ponAbe2.chr4 195278311 39 + 198332218 GAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249514 39 + 115148730 GATGAGGCGGGTGACATGCGAGTGCTGGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051870 39 + 184069350 CATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389256 39 + 189454096 CATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004419 39 + 178775436 CATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCCC i papAnu2.chr5 C 0 T 59 s chlSab2.chr7 132847552 39 + 135778131 GATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 39 - 190850796 GATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=45937.000000 s hg38.chr4_KI270785v1_alt 42421 15 + 119912 GGACGCCACCATTTC s panTro4.chr4 190312073 15 + 193495092 GGACGCCACCATTTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278350 15 + 198332218 GGACGCCACCATTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249553 15 + 115148730 GGAGGCCACCATTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 15 + 184069350 GGACGCCACCTTTTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389295 15 + 189454096 GGATGCCACCATTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004399 15 + 178775436 GGATGCCACCATTTC i papAnu2.chr5 T 59 C 0 s chlSab2.chr7 132847591 15 + 135778131 GGACGCCACCATTTC i chlSab2.chr7 C 0 I 59 s calJac3.chr3 188231828 15 - 190850796 GGACACCACCATTTC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11788.000000 s hg38.chr4_KI270785v1_alt 42436 4 + 119912 ACAT s panTro4.chr4 190312088 4 + 193495092 ACAT i panTro4.chr4 C 0 I 178 s ponAbe2.chr4 195278365 4 + 198332218 ACAT i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249568 4 + 115148730 ACAT i nomLeu3.chr7b C 0 T 588 s rheMac3.chr5 181051924 4 + 184069350 ACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389310 4 + 189454096 ACAT i macFas5.chr5 C 0 T 234 s papAnu2.chr5 176004414 4 + 178775436 ACAT i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847665 4 + 135778131 ACAT i chlSab2.chr7 I 59 C 0 s calJac3.chr3 188231843 4 - 190850796 CCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=29392.000000 s hg38.chr4_KI270785v1_alt 42440 12 + 119912 GAAGAGGCAGGC s panTro4.chr4 190312270 12 + 193495092 GAAGAGGCAGGC i panTro4.chr4 I 178 C 0 s ponAbe2.chr4 195278370 12 + 198332218 TAAGAGGCAGGC i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111248984 12 + 115148730 GAAGAGGCAGGC i nomLeu3.chr7b T 588 C 0 s rheMac3.chr5 181051928 12 + 184069350 GGGGAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 12 + 189454096 GATGAGGCAGGC i macFas5.chr5 T 234 C 0 s papAnu2.chr5 176004419 12 + 178775436 CATGAGGCAGGC i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847669 12 + 135778131 GGGGAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 12 - 190850796 GGGGAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=83744.000000 s hg38.chr4_KI270785v1_alt 42452 30 + 119912 GACATGCGAGTGCTGAGGAGGAACCCCGGA s panTro4.chr4 190312282 30 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCTGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278382 30 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111248996 30 + 115148730 GACATGCGAGTGCTAGGGAGGAATCCTGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 30 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 30 + 189454096 GACATGCGAGTGCTGGAGAGGAACCTCGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004431 30 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCCAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847681 30 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCAGA i chlSab2.chr7 C 0 T 411 s calJac3.chr3 188231801 30 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=29749.000000 s hg38.chr4_KI270785v1_alt 42482 11 + 119912 CGCCACCATTT s panTro4.chr4 190312312 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278412 11 + 198332218 CGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249026 11 + 115148730 GGTCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051970 11 + 184069350 TGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389122 11 + 189454096 CGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004461 11 + 178775436 TGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847300 11 + 135778131 CGCCACCACTT i chlSab2.chr7 T 411 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=19054.000000 s hg38.chr4_KI270785v1_alt 42493 7 + 119912 CACATGG s panTro4.chr4 190312323 7 + 193495092 CACATGG i panTro4.chr4 C 0 T 531 s ponAbe2.chr4 195278423 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249037 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389133 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004472 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847311 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=165983.000000 s hg38.chr4_KI270785v1_alt 42500 57 + 119912 AAGAGGCAGGGGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190311799 57 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCATAT i panTro4.chr4 T 531 C 0 s ponAbe2.chr4 195278430 57 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 T 450 s nomLeu3.chr7b 111249044 57 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 57 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389140 57 + 189454096 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004479 57 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847318 57 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 57 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=4469.000000 s hg38.chr4_KI270785v1_alt 42557 3 + 119912 GAA s panTro4.chr4 190311856 3 + 193495092 GCA i panTro4.chr4 C 0 I 1 s nomLeu3.chr7b 111249101 3 + 115148730 GGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 3 + 184069350 GGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389197 3 + 189454096 GGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004536 3 + 178775436 GGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847375 3 + 135778131 GGG i chlSab2.chr7 C 0 T 177 s calJac3.chr3 188231847 3 - 190850796 GGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 450 + 198332218 T a score=20042.000000 s hg38.chr4_KI270785v1_alt 42560 9 + 119912 GAGGCAGGC s panTro4.chr4 190311860 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s nomLeu3.chr7b 111249104 9 + 115148730 GAGGGAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004539 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847201 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 177 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 450 + 198332218 T a score=17972.000000 s hg38.chr4_KI270785v1_alt 42569 9 + 119912 GACATGCGT s panTro4.chr4 190311869 9 + 193495092 GACATGCGA i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111249113 9 + 115148730 GACATGCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 9 + 184069350 GACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 9 + 189454096 GACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004548 9 + 178775436 GACATGCGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847210 9 + 135778131 GACATGTGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 9 - 190850796 GGCATGACA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 450 + 198332218 T a score=95670.000000 s hg38.chr4_KI270785v1_alt 42578 32 + 119912 GTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190311878 32 + 193495092 GTGCTAGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278037 32 + 198332218 GTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 T 450 C 0 s nomLeu3.chr7b 111249122 32 + 115148730 GTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051949 32 + 184069350 GTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389218 32 + 189454096 GTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004557 32 + 178775436 GTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847219 32 + 135778131 GTGCCAGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231810 32 - 190850796 GTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11728.000000 s hg38.chr4_KI270785v1_alt 42610 4 + 119912 CACA s panTro4.chr4 190311910 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278069 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249154 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 4 + 184069350 CACA i rheMac3.chr5 C 0 T 176 s macFas5.chr5 186389250 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004589 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847251 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6626.000000 s hg38.chr4_KI270785v1_alt 42614 5 + 119912 TGGAA s panTro4.chr4 190311914 5 + 193495092 AGCAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278073 5 + 198332218 TGTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249158 5 + 115148730 TGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 5 + 184069350 TGGAT i rheMac3.chr5 T 176 C 0 s macFas5.chr5 186389254 5 + 189454096 TGCAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004593 5 + 178775436 TGCAT i papAnu2.chr5 C 0 T 81 s chlSab2.chr7 132847255 5 + 135778131 TGGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 5 - 190850796 TGGAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=91092.000000 s hg38.chr4_KI270785v1_alt 42619 40 + 119912 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGAT s panTro4.chr4 190311919 40 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278078 40 + 198332218 GAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249163 40 + 115148730 GAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 40 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389259 40 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847260 40 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCTGGAT i chlSab2.chr7 C 0 I 177 s calJac3.chr3 188231792 40 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004598 81 + 178775436 T a score=25159.000000 s hg38.chr4_KI270785v1_alt 42659 10 + 119912 GCCACCATTT s panTro4.chr4 190311959 10 + 193495092 ACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278118 10 + 198332218 GCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249203 10 + 115148730 GCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051854 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389299 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847477 10 + 135778131 GCCACCATTT i chlSab2.chr7 I 177 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004598 81 + 178775436 T a score=73715.000000 s hg38.chr4_KI270785v1_alt 42669 34 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGG s panTro4.chr4 190311969 34 + 193495092 CATATGCATGAGGCAGGCGACATGCGAGTGCTGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278128 34 + 198332218 TACATGGAAGAGGCAGGCGACATGCGAGTGCTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249213 34 + 115148730 CACATGGATGAGGCAGGCGACATGCGAGTGCTAG i nomLeu3.chr7b C 0 I 177 s rheMac3.chr5 181051864 34 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 34 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847487 34 + 135778131 CACATGGATGAGGCAGGTGACATGTCAGTGCTGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 34 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004598 81 + 178775436 T a score=1694.000000 s hg38.chr4_KI270785v1_alt 42703 1 + 119912 A s panTro4.chr4 190312003 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278162 1 + 198332218 A i ponAbe2.chr4 C 0 I 236 s nomLeu3.chr7b 111249424 1 + 115148730 G i nomLeu3.chr7b I 177 C 0 s rheMac3.chr5 181051898 1 + 184069350 A i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389343 1 + 189454096 A i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847521 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231817 1 - 190850796 A i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004598 81 + 178775436 T a score=24746.000000 s hg38.chr4_KI270785v1_alt 42704 10 + 119912 GAGGAACCCC s panTro4.chr4 190312004 10 + 193495092 GAGGAACCCC i panTro4.chr4 C 0 I 236 s ponAbe2.chr4 195278399 10 + 198332218 GAGGAACCCT i ponAbe2.chr4 I 236 C 0 s nomLeu3.chr7b 111249425 10 + 115148730 GAGGAACCCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 10 + 184069350 GAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389344 10 + 189454096 GAGGAACCCC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847522 10 + 135778131 GAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 10 - 190850796 GAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004598 81 + 178775436 T a score=9669.000000 s hg38.chr4_KI270785v1_alt 42714 4 + 119912 GGAC s panTro4.chr4 190312250 4 + 193495092 GGAC i panTro4.chr4 I 236 C 0 s ponAbe2.chr4 195278409 4 + 198332218 GGAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249435 4 + 115148730 GGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 4 + 184069350 GGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389354 4 + 189454096 GGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004517 4 + 178775436 GGAT i papAnu2.chr5 T 81 C 0 s chlSab2.chr7 132847532 4 + 135778131 AGAC i chlSab2.chr7 C 0 I 118 s calJac3.chr3 188231828 4 - 190850796 GGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=67792.000000 s hg38.chr4_KI270785v1_alt 42718 27 + 119912 GCCACCATTTCACAT-GAAGAGGCAGGC s panTro4.chr4 190312254 28 + 193495092 GCCACCATTTCACATGGAAGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278413 28 + 198332218 GCCACCATTTCACATGGAAGAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249439 28 + 115148730 GCCACCATTTCACATGGATGAGGCAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051913 27 + 184069350 GCCACCTTTTCACAT-GGGGAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389358 27 + 189454096 GCCACCATTTCACAT-GGGGAGGCTGGC i macFas5.chr5 C 0 T 58 s papAnu2.chr5 176004521 27 + 178775436 GCCAGCATTTCACAT-GGGGAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847654 27 + 135778131 GCCACCTTTTCACAT-GGGGAGGCAGGT i chlSab2.chr7 I 118 C 0 s calJac3.chr3 188231832 27 - 190850796 ACCACCATTTCCCAT-GGGGAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=26616.000000 s hg38.chr4_KI270785v1_alt 42745 9 + 119912 GACATGCGA s panTro4.chr4 190312282 9 + 193495092 GACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278441 9 + 198332218 GACATGCGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249467 9 + 115148730 GACATGCGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 9 + 184069350 GACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389327 9 + 189454096 GACATGCGA i macFas5.chr5 T 58 C 0 s papAnu2.chr5 176004548 9 + 178775436 GACATGCGA i papAnu2.chr5 C 0 T 234 s chlSab2.chr7 132847681 9 + 135778131 GACATGCGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 9 - 190850796 GGCATGACA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=112556.000000 s hg38.chr4_KI270785v1_alt 42754 37 + 119912 GTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190312291 37 + 193495092 GTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278450 37 + 198332218 GTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249476 37 + 115148730 GTGCTGGGGAGGAACCCCGGACGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051949 37 + 184069350 GTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389336 37 + 189454096 GTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004323 37 + 178775436 GTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 T 234 C 0 s chlSab2.chr7 132847690 37 + 135778131 GTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231810 37 - 190850796 GTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3600.000000 s hg38.chr4_KI270785v1_alt 42791 1 + 119912 G s panTro4.chr4 190312328 1 + 193495092 G i panTro4.chr4 C 0 T 354 s ponAbe2.chr4 195278487 1 + 198332218 G i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249513 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051986 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389373 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004360 1 + 178775436 G i papAnu2.chr5 C 0 T 234 s chlSab2.chr7 132847727 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11317.000000 s hg38.chr4_KI270785v1_alt 42792 7 + 119912 AA-GAGGC s panTro4.chr4 190311975 8 + 193495092 CATGAGGC i panTro4.chr4 T 354 C 0 s ponAbe2.chr4 195278489 7 + 198332218 AA-GAGGC i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249514 8 + 115148730 GATGAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 7 + 184069350 -GGGAGGC i rheMac3.chr5 C 0 T 116 s macFas5.chr5 186389374 7 + 189454096 -GGGAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004127 7 + 178775436 -ATGAGGC i papAnu2.chr5 T 234 C 0 s chlSab2.chr7 132847728 7 + 135778131 -GGGAGGC i chlSab2.chr7 C 0 T 352 s calJac3.chr3 188231790 7 - 190850796 -ATGAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=9026.000000 s hg38.chr4_KI270785v1_alt 42799 4 + 119912 AGGC s panTro4.chr4 190311983 4 + 193495092 AGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278496 4 + 198332218 AGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249522 4 + 115148730 GGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051878 4 + 184069350 AGGT i rheMac3.chr5 T 116 C 0 s macFas5.chr5 186389381 4 + 189454096 TGGC i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004134 4 + 178775436 AGGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 4 + 135778131 AGGT i chlSab2.chr7 T 352 C 0 s calJac3.chr3 188231797 4 - 190850796 AGGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=134289.000000 s hg38.chr4_KI270785v1_alt 42803 46 + 119912 GACATGTGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT s panTro4.chr4 190311987 46 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278500 46 + 198332218 GACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249526 46 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051882 46 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 46 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 T 176 T 175 s papAnu2.chr5 176004138 46 + 178775436 GACATGCAAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 46 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 46 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3600.000000 s hg38.chr4_KI270785v1_alt 42849 1 + 119912 G s panTro4.chr4 190312033 1 + 193495092 G i panTro4.chr4 C 0 T 56 s ponAbe2.chr4 195278546 1 + 198332218 G i ponAbe2.chr4 C 0 T 412 s nomLeu3.chr7b 111249572 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 1 + 189454096 G i macFas5.chr5 T 175 C 0 s papAnu2.chr5 176004184 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847433 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=484.000000 s hg38.chr4_KI270785v1_alt 42850 2 + 119912 AA s ponAbe2.chr4 195278135 2 + 198332218 AA i ponAbe2.chr4 T 412 C 0 s nomLeu3.chr7b 111249573 2 + 115148730 GG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389081 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004185 2 + 178775436 GG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847434 2 + 135778131 GA i chlSab2.chr7 C 0 T 40 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312034 56 + 193495092 T a score=22128.000000 s hg38.chr4_KI270785v1_alt 42852 9 + 119912 GAGGCAGGC s panTro4.chr4 190311978 9 + 193495092 GAGGCAGGC i panTro4.chr4 T 56 C 0 s ponAbe2.chr4 195278137 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249575 9 + 115148730 GAGGCTGGC i nomLeu3.chr7b C 0 T 176 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389083 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004187 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847436 40 + 135778131 T a score=17992.000000 s hg38.chr4_KI270785v1_alt 42861 9 + 119912 GACATGCGT s panTro4.chr4 190311987 9 + 193495092 GACATGCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278146 9 + 198332218 GACATGCGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249408 9 + 115148730 GACATGCAA i nomLeu3.chr7b T 176 C 0 s rheMac3.chr5 181051940 9 + 184069350 GACATGCGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389092 9 + 189454096 GACATGCGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004196 9 + 178775436 GACATGCGA i papAnu2.chr5 C 0 I 352 s calJac3.chr3 188231801 9 - 190850796 GGCATGACA i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847436 40 + 135778131 T a score=98814.000000 s hg38.chr4_KI270785v1_alt 42870 32 + 119912 GTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311996 32 + 193495092 GTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278155 32 + 198332218 GTGCTGGAGAGGAACCCTGGATGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249417 32 + 115148730 GTGCTGGGGAGGAACCCCGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051949 32 + 184069350 GTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389101 32 + 189454096 GTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004557 32 + 178775436 GTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 I 352 C 0 s chlSab2.chr7 132847396 32 + 135778131 GTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 T 40 C 0 s calJac3.chr3 188231810 32 - 190850796 GTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17809.000000 s hg38.chr4_KI270785v1_alt 42902 6 + 119912 CACATG s panTro4.chr4 190312028 6 + 193495092 CATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278187 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249449 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 6 + 184069350 CACATG i rheMac3.chr5 C 0 T 114 s macFas5.chr5 186389133 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004589 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847428 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-1066.000000 s hg38.chr4_KI270785v1_alt 42908 1 + 119912 C s panTro4.chr4 190312034 1 + 193495092 C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278193 1 + 198332218 T i ponAbe2.chr4 C 0 I 119 s nomLeu3.chr7b 111249455 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389139 1 + 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004595 1 + 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847434 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051987 114 + 184069350 T a score=1449.000000 s hg38.chr4_KI270785v1_alt 42909 2 + 119912 AT s panTro4.chr4 190312035 2 + 193495092 AT i panTro4.chr4 C 0 T 62 s ponAbe2.chr4 195278313 1 + 198332218 A- i ponAbe2.chr4 I 119 C 0 s nomLeu3.chr7b 111249456 2 + 115148730 AT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389140 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004596 2 + 178775436 AT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847435 2 + 135778131 AT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 2 - 190850796 AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051987 114 + 184069350 T a score=96896.000000 s hg38.chr4_KI270785v1_alt 42911 56 + 119912 GAGACAGGCGACATGTGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCACATG s ponAbe2.chr4 195278314 56 + 198332218 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 T 176 s nomLeu3.chr7b 111249458 56 + 115148730 GAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389142 56 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 T 58 s papAnu2.chr5 176004598 56 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCATATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847437 56 + 135778131 GAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 56 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051987 114 + 184069350 T e panTro4.chr4 190312037 62 + 193495092 T a score=382.000000 s hg38.chr4_KI270785v1_alt 42967 2 + 119912 AA s panTro4.chr4 190311975 2 + 193495092 CA i panTro4.chr4 T 62 I 1 s nomLeu3.chr7b 111249514 2 + 115148730 GA i nomLeu3.chr7b C 0 T 470 s macFas5.chr5 186389140 1 + 189454096 -A i macFas5.chr5 T 58 I 1 s papAnu2.chr5 176004654 2 + 178775436 GG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847493 2 + 135778131 GA i chlSab2.chr7 C 0 T 175 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e rheMac3.chr5 181051987 114 + 184069350 T e ponAbe2.chr4 195278370 176 + 198332218 T a score=21048.000000 s hg38.chr4_KI270785v1_alt 42969 9 + 119912 GAGGCAGGC s panTro4.chr4 190311978 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s nomLeu3.chr7b 111249046 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b T 470 C 0 s rheMac3.chr5 181051873 9 + 184069350 GAGGCAGGT i rheMac3.chr5 T 114 C 0 s macFas5.chr5 186389142 9 + 189454096 GAGGCAGGT i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004656 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 T 117 s chlSab2.chr7 132847320 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 175 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278370 176 + 198332218 T a score=104553.000000 s hg38.chr4_KI270785v1_alt 42978 47 + 119912 GACATGCGAGTGCTGAGGAGGAACCCTGGGCGCCACCATTTCACATG s panTro4.chr4 190311987 47 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCATATG i panTro4.chr4 C 0 T 165 s nomLeu3.chr7b 111249055 47 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051882 47 + 184069350 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389151 47 + 189454096 GACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004548 47 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTTCACATG i papAnu2.chr5 T 117 C 0 s chlSab2.chr7 132847329 47 + 135778131 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 47 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278370 176 + 198332218 T a score=-72.000000 s hg38.chr4_KI270785v1_alt 43025 1 + 119912 A s ponAbe2.chr4 195278194 1 + 198332218 A i ponAbe2.chr4 T 176 C 0 s nomLeu3.chr7b 111249102 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 1 + 184069350 G i rheMac3.chr5 C 0 I 58 s macFas5.chr5 186389198 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004595 1 + 178775436 C i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847376 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312034 165 + 193495092 T a score=12138.000000 s hg38.chr4_KI270785v1_alt 43026 6 + 119912 AGAGGC s ponAbe2.chr4 195278195 6 + 198332218 AGAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249103 6 + 115148730 GGAGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051988 6 + 184069350 GGAGGC i rheMac3.chr5 I 58 T 58 s macFas5.chr5 186389199 6 + 189454096 GGAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004597 6 + 178775436 TGAGGC i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847377 6 + 135778131 GGAGGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231849 6 - 190850796 GGAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312034 165 + 193495092 T a score=6650.000000 s hg38.chr4_KI270785v1_alt 43032 3 + 119912 AGG s ponAbe2.chr4 195278201 3 + 198332218 AGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249109 3 + 115148730 AGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051936 3 + 184069350 AGG i rheMac3.chr5 T 58 C 0 s macFas5.chr5 186389205 3 + 189454096 AGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004603 3 + 178775436 AGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 3 + 135778131 AGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231855 3 - 190850796 TGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312034 165 + 193495092 T a score=-357.000000 s hg38.chr4_KI270785v1_alt 43035 1 + 119912 G s ponAbe2.chr4 195278204 1 + 198332218 T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249112 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051939 1 + 184069350 C i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389208 1 + 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004606 1 + 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847386 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 1 - 190850796 T i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312034 165 + 193495092 T a score=123929.000000 s hg38.chr4_KI270785v1_alt 43036 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311869 41 + 193495092 GACATGCGAGTGCTAGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 T 165 C 0 s ponAbe2.chr4 195278205 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249113 41 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004607 41 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16547.000000 s hg38.chr4_KI270785v1_alt 43077 7 + 119912 CACATGG s panTro4.chr4 190311910 7 + 193495092 CACAAGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278246 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249154 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 173 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004648 7 + 178775436 CATATGG i papAnu2.chr5 C 0 I 2 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-2946.000000 s hg38.chr4_KI270785v1_alt 43084 3 + 119912 AAC s panTro4.chr4 190311917 3 + 193495092 AAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278253 3 + 198332218 AAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249161 3 + 115148730 ATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389257 2 + 189454096 AT- i macFas5.chr5 C 0 I 1 s chlSab2.chr7 132847435 2 + 135778131 AT- i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231790 3 - 190850796 ATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004655 2 + 178775436 I e rheMac3.chr5 181051988 173 + 184069350 T a score=25767.000000 s hg38.chr4_KI270785v1_alt 43087 8 + 119912 AGGCAGGC s panTro4.chr4 190311920 8 + 193495092 AGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278256 8 + 198332218 AGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249164 8 + 115148730 AGGCAGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051815 8 + 184069350 AGGCAGGC i rheMac3.chr5 T 173 C 0 s macFas5.chr5 186389260 8 + 189454096 AGGCAGGC i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004657 8 + 178775436 AGGCAGGC i papAnu2.chr5 I 2 T 175 s chlSab2.chr7 132847438 8 + 135778131 AGGCAGGT i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231793 8 - 190850796 AGGCAGGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=20048.000000 s hg38.chr4_KI270785v1_alt 43095 7 + 119912 GACATGG s panTro4.chr4 190311928 7 + 193495092 GACATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278264 7 + 198332218 GACATGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249172 7 + 115148730 GACATGC i nomLeu3.chr7b C 0 I 59 s rheMac3.chr5 181051823 7 + 184069350 GACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389268 7 + 189454096 GACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004490 7 + 178775436 GACATGC i papAnu2.chr5 T 175 C 0 s chlSab2.chr7 132847446 7 + 135778131 GACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 7 - 190850796 GGCATGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=27049.000000 s hg38.chr4_KI270785v1_alt 43102 10 + 119912 GAGTGCTGAG s panTro4.chr4 190311935 10 + 193495092 GAGTGCTGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278271 10 + 198332218 GAGTGCTGGA i ponAbe2.chr4 C 0 T 118 s nomLeu3.chr7b 111249238 10 + 115148730 GAGTGCTAGG i nomLeu3.chr7b I 59 C 0 s rheMac3.chr5 181051830 10 + 184069350 GAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389275 10 + 189454096 GAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004497 10 + 178775436 GAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847453 10 + 135778131 GAGTGCTAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231808 10 - 190850796 CAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=31270.000000 s hg38.chr4_KI270785v1_alt 43112 10 + 119912 GAGGAACCCT s panTro4.chr4 190311945 10 + 193495092 GAGGAACCCT i panTro4.chr4 C 0 I 59 s ponAbe2.chr4 195278163 10 + 198332218 GAGGAACCCT i ponAbe2.chr4 T 118 C 0 s nomLeu3.chr7b 111249248 10 + 115148730 GAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051840 10 + 184069350 GAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389285 10 + 189454096 GAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004507 10 + 178775436 GAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847463 10 + 135778131 GAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 10 - 190850796 GAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=52766.000000 s hg38.chr4_KI270785v1_alt 43122 18 + 119912 GGACGCCACCATTTCACA s panTro4.chr4 190312014 18 + 193495092 GGACGCCACCATTTCATA i panTro4.chr4 I 59 C 0 s ponAbe2.chr4 195278173 18 + 198332218 GGATGCCACCATTTCACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249258 18 + 115148730 GGAGGCCACCATTTCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 18 + 184069350 GGACGCCACCATTTCACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389295 18 + 189454096 GGATGCCACCATTTCACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004517 18 + 178775436 GGATGCCAGCATTTCACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847473 18 + 135778131 GGATGCCACCATTTCACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 18 - 190850796 GGACACCACCATTTCCCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=6230.000000 s hg38.chr4_KI270785v1_alt 43140 3 + 119912 TGG s panTro4.chr4 190312032 3 + 193495092 TGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278191 3 + 198332218 TGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249276 3 + 115148730 TGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 3 + 184069350 TGG i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389313 3 + 189454096 TGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004535 3 + 178775436 TGG i papAnu2.chr5 C 0 T 175 s chlSab2.chr7 132847491 3 + 135778131 TGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231846 3 - 190850796 TGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-6933.000000 s hg38.chr4_KI270785v1_alt 43143 2 + 119912 AA- s panTro4.chr4 190312035 2 + 193495092 AT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249279 2 + 115148730 AT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 1 + 184069350 A-- i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389316 1 + 189454096 A-- i macFas5.chr5 C 0 I 1 s chlSab2.chr7 132847494 1 + 135778131 A-- i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004538 175 + 178775436 T a score=149230.000000 s hg38.chr4_KI270785v1_alt 43145 50 + 119912 GAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCTGGATGCCACCATTT s panTro4.chr4 190312037 50 + 193495092 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278196 50 + 198332218 GAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249281 50 + 115148730 GAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 50 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389318 50 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 I 1 T 294 s papAnu2.chr5 176004363 50 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 T 175 C 0 s chlSab2.chr7 132847496 50 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTT i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231792 50 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10210.000000 s hg38.chr4_KI270785v1_alt 43195 4 + 119912 CACA s panTro4.chr4 190312087 4 + 193495092 CACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278246 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249331 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389074 4 + 189454096 CATG i macFas5.chr5 T 294 C 0 s papAnu2.chr5 176004413 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847546 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=157246.000000 s hg38.chr4_KI270785v1_alt 43199 55 + 119912 TGGAAGAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190312091 55 + 193495092 TGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278250 55 + 198332218 TGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249335 55 + 115148730 TGGATGAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGAAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 55 + 184069350 TGGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389078 55 + 189454096 TGGATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004417 55 + 178775436 TGCATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847550 55 + 135778131 TGGATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCGGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 55 - 190850796 TGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=71133.000000 s hg38.chr4_KI270785v1_alt 43254 25 + 119912 CACATGGAAGAGGCAGGCGACATGT s panTro4.chr4 190312146 25 + 193495092 CACATGCATGAGGCAGGCGACATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278305 25 + 198332218 CACATGGAAGAGGCAGGCGACATGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249390 25 + 115148730 CACATGGATGAGGCAGGTGACATGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 25 + 184069350 CACATGCATGAGGCAGGTGACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 25 + 189454096 CACATGCATGAGGCAGGTGACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004472 25 + 178775436 CACATGCATGAGGCAGGTGACATGC i papAnu2.chr5 C 0 I 50 s chlSab2.chr7 132847605 25 + 135778131 CACATGCATGAGGCAGGTGACATGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 25 - 190850796 CATGTGGATGAGGCAGGTGGCATGA i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=44012.000000 s hg38.chr4_KI270785v1_alt 43279 20 + 119912 GAGTGCTGAGGAGGAACCCC s panTro4.chr4 190312171 20 + 193495092 GAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278330 20 + 198332218 GAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249415 20 + 115148730 AAGTGCTGGGGAGGAACCCC i nomLeu3.chr7b C 0 T 59 s rheMac3.chr5 181051889 20 + 184069350 GAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389158 20 + 189454096 GAGTGCTGGAGAGGAACCTC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847630 20 + 135778131 GAGTGCTAGAGAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231808 20 - 190850796 CAGTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=43180.000000 s hg38.chr4_KI270785v1_alt 43299 20 + 119912 GGACGCCACCATTTCACATG s panTro4.chr4 190312191 20 + 193495092 GGACACCACCATTTCATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278350 20 + 198332218 GGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 T 165 s nomLeu3.chr7b 111249376 20 + 115148730 GAAGGCCACCATTTCACATG i nomLeu3.chr7b T 59 C 0 s rheMac3.chr5 181051909 20 + 184069350 GGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389178 20 + 189454096 GGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847650 20 + 135778131 AGACGCCACCTTTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 20 - 190850796 GGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=607.000000 s hg38.chr4_KI270785v1_alt 43319 2 + 119912 AA s panTro4.chr4 190312211 2 + 193495092 CA i panTro4.chr4 C 0 T 353 s nomLeu3.chr7b 111249396 2 + 115148730 GA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847670 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I e ponAbe2.chr4 195278370 165 + 198332218 T a score=15919.000000 s hg38.chr4_KI270785v1_alt 43321 9 + 119912 GAGGCAGGC s panTro4.chr4 190311860 9 + 193495092 GAGGCAGGC i panTro4.chr4 T 353 C 0 s nomLeu3.chr7b 111249399 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847672 9 + 135778131 GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I e ponAbe2.chr4 195278370 165 + 198332218 T a score=94348.000000 s hg38.chr4_KI270785v1_alt 43330 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311869 41 + 193495092 GACATGCGAGTGCTAGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278205 41 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 T 165 C 0 s nomLeu3.chr7b 111249408 41 + 115148730 GACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847681 41 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=12775.000000 s hg38.chr4_KI270785v1_alt 43371 6 + 119912 CACATG s panTro4.chr4 190311910 6 + 193495092 CACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278246 6 + 198332218 CACATG i ponAbe2.chr4 C 0 T 118 s nomLeu3.chr7b 111249449 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389250 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847722 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=100.000000 s hg38.chr4_KI270785v1_alt 43377 1 + 119912 G s panTro4.chr4 190311916 1 + 193495092 C i panTro4.chr4 C 0 I 118 s ponAbe2.chr4 195278134 1 + 198332218 G i ponAbe2.chr4 T 118 C 0 s nomLeu3.chr7b 111249455 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 1 + 184069350 G i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389256 1 + 189454096 C i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847728 1 + 135778131 G i chlSab2.chr7 C 0 T 294 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=124787.000000 s hg38.chr4_KI270785v1_alt 43378 58 + 119912 AAGACGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGGCGCCACCATTTCACAT-G s panTro4.chr4 190312035 59 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGG i panTro4.chr4 I 118 C 0 s ponAbe2.chr4 195278135 59 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGATGCCACCATTTCACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249456 59 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 58 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG- i rheMac3.chr5 T 117 I 1 s macFas5.chr5 186389257 58 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG- i macFas5.chr5 C 0 T 116 s chlSab2.chr7 132847435 58 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTTCACATG- i chlSab2.chr7 T 294 I 1 s calJac3.chr3 188231790 58 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=-5642.000000 s hg38.chr4_KI270785v1_alt 43436 2 + 119912 -AA s panTro4.chr4 190312094 2 + 193495092 -AA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 2 + 198332218 -AA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249515 1 + 115148730 -A- i nomLeu3.chr7b C 0 T 470 s rheMac3.chr5 181051930 1 + 184069350 -G- i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389199 1 + 189454096 -G- i macFas5.chr5 T 116 C 0 s chlSab2.chr7 132847494 1 + 135778131 -A- i chlSab2.chr7 I 1 T 175 s calJac3.chr3 188231848 2 - 190850796 GG- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=20398.000000 s hg38.chr4_KI270785v1_alt 43438 8 + 119912 GAGGCAGG s panTro4.chr4 190312096 8 + 193495092 GAGGCAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278196 8 + 198332218 GAGGCAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249046 8 + 115148730 GAGGCAGG i nomLeu3.chr7b T 470 C 0 s rheMac3.chr5 181051931 8 + 184069350 GAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 8 + 189454096 GAGGCAGG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847320 8 + 135778131 GAGGCAGG i chlSab2.chr7 T 175 C 0 s calJac3.chr3 188231850 8 - 190850796 GAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004497 50 + 178775436 I a score=133957.000000 s hg38.chr4_KI270785v1_alt 43446 47 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCCGGGCGCCACCATTTCACAT s panTro4.chr4 190312104 47 + 193495092 CGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACAT i panTro4.chr4 C 0 T 114 s ponAbe2.chr4 195278204 47 + 198332218 TGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249054 47 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051939 47 + 184069350 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389208 47 + 189454096 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 T 175 s papAnu2.chr5 176004547 47 + 178775436 CGACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTTCACAT i papAnu2.chr5 I 50 I 1 s chlSab2.chr7 132847328 47 + 135778131 TGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 47 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 T 58 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=1225.000000 s hg38.chr4_KI270785v1_alt 43493 1 + 119912 G s ponAbe2.chr4 195278252 1 + 198332218 G i ponAbe2.chr4 I 1 T 59 s nomLeu3.chr7b 111249101 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051986 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389080 1 + 189454096 G i macFas5.chr5 T 175 C 0 s papAnu2.chr5 176004595 1 + 178775436 C i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847375 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312151 114 + 193495092 T a score=-541.000000 s hg38.chr4_KI270785v1_alt 43494 2 + 119912 AA s ponAbe2.chr4 195278194 2 + 198332218 AA i ponAbe2.chr4 T 59 C 0 s nomLeu3.chr7b 111249102 2 + 115148730 GG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389081 2 + 189454096 AT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004596 2 + 178775436 AT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847376 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 2 - 190850796 AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312151 114 + 193495092 T a score=15876.000000 s hg38.chr4_KI270785v1_alt 43496 5 + 119912 GAGGC s panTro4.chr4 190312037 5 + 193495092 GAGGC i panTro4.chr4 T 114 C 0 s ponAbe2.chr4 195278196 5 + 198332218 GAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249104 5 + 115148730 GAGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051989 5 + 184069350 GAGGC i rheMac3.chr5 C 0 T 175 s macFas5.chr5 186389083 5 + 189454096 GAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004598 5 + 178775436 GAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847378 5 + 135778131 GAGGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 5 - 190850796 GAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=135047.000000 s hg38.chr4_KI270785v1_alt 43501 45 + 119912 AGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190312042 45 + 193495092 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278201 45 + 198332218 AGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249109 45 + 115148730 AGGTGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051819 45 + 184069350 AGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 T 175 C 0 s macFas5.chr5 186389088 45 + 189454096 AGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004603 45 + 178775436 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 45 + 135778131 AGGTGACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231797 45 - 190850796 AGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=18259.000000 s hg38.chr4_KI270785v1_alt 43546 7 + 119912 CACATGG s panTro4.chr4 190312087 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278246 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 I 177 s nomLeu3.chr7b 111249154 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004648 7 + 178775436 CATATGG i papAnu2.chr5 C 0 T 518 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=23782.000000 s hg38.chr4_KI270785v1_alt 43553 10 + 119912 AAGAGGCAGG s panTro4.chr4 190312094 10 + 193495092 AAGAGGCAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 10 + 198332218 AAGAGGCAGG i ponAbe2.chr4 I 177 C 0 s nomLeu3.chr7b 111249161 10 + 115148730 ATGAGGCAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 10 + 184069350 ATGAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 10 + 189454096 ATGAGGCAGG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847435 10 + 135778131 ATGAGGCAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 10 - 190850796 ATGAGGCAGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004655 518 + 178775436 T a score=137888.000000 s hg38.chr4_KI270785v1_alt 43563 48 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATG s panTro4.chr4 190312104 48 + 193495092 CGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278440 48 + 198332218 CGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249171 48 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051881 48 + 184069350 TGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389150 48 + 189454096 TGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004137 48 + 178775436 TGACATGCAAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i papAnu2.chr5 T 518 T 58 s chlSab2.chr7 132847445 48 + 135778131 TGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 48 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=29.000000 s hg38.chr4_KI270785v1_alt 43611 2 + 119912 AA s panTro4.chr4 190312152 2 + 193495092 CA i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278488 2 + 198332218 GA i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249219 2 + 115148730 GA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004127 2 + 178775436 AT i papAnu2.chr5 T 58 C 0 s chlSab2.chr7 132847493 2 + 135778131 GA i chlSab2.chr7 C 0 T 175 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=27655.000000 s hg38.chr4_KI270785v1_alt 43613 9 + 119912 GAGGCAGGC s panTro4.chr4 190312155 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278491 9 + 198332218 GAGGCAGGT i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249222 9 + 115148730 GAGGCAGGC i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004129 9 + 178775436 GAGGCAGGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847320 9 + 135778131 GAGGCAGGT i chlSab2.chr7 T 175 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 70 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=64042.000000 s hg38.chr4_KI270785v1_alt 43622 27 + 119912 GACATGCGAGTGCTGAGGAGGAACCCT s panTro4.chr4 190312164 27 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278500 27 + 198332218 GACATGGGAGTGCTGGGGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249231 27 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 27 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 27 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 T 58 s papAnu2.chr5 176004138 27 + 178775436 GACATGCAAGTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847329 27 + 135778131 GACATGCGAGTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231859 70 - 190850796 T a score=44728.000000 s hg38.chr4_KI270785v1_alt 43649 19 + 119912 GGACGCCACCATTTCACAT s panTro4.chr4 190312191 19 + 193495092 GGACACCACCATTTCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278527 19 + 198332218 GGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249258 19 + 115148730 GGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051967 19 + 184069350 GGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389178 19 + 189454096 GGACGCCACCTTTTCACAT i macFas5.chr5 T 58 C 0 s papAnu2.chr5 176004165 19 + 178775436 GGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847356 19 + 135778131 GGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e calJac3.chr3 188231859 70 - 190850796 T a score=3600.000000 s hg38.chr4_KI270785v1_alt 43668 1 + 119912 G s panTro4.chr4 190312210 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278546 1 + 198332218 G i ponAbe2.chr4 C 0 T 412 s nomLeu3.chr7b 111249277 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051986 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389197 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004184 1 + 178775436 G i papAnu2.chr5 C 0 I 59 s chlSab2.chr7 132847375 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 70 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-3038.000000 s hg38.chr4_KI270785v1_alt 43669 2 + 119912 AA- s panTro4.chr4 190312211 2 + 193495092 CA- i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278135 2 + 198332218 AA- i ponAbe2.chr4 T 412 C 0 s nomLeu3.chr7b 111249278 2 + 115148730 GA- i nomLeu3.chr7b C 0 I 237 s rheMac3.chr5 181051987 2 + 184069350 GG- i rheMac3.chr5 C 0 T 175 s macFas5.chr5 186389198 2 + 189454096 GG- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004244 1 + 178775436 -A- i papAnu2.chr5 I 59 I 1 s chlSab2.chr7 132847376 2 + 135778131 GG- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=106480.000000 s hg38.chr4_KI270785v1_alt 43671 35 + 119912 GAGGCAGGCGACATGCGTGTGCTGGAGAGGAACCT s panTro4.chr4 190312214 35 + 193495092 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278137 35 + 198332218 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249517 35 + 115148730 GAGGCGGGTGACATGCGAGTGCTGGGGAGGAACCC i nomLeu3.chr7b I 237 C 0 s rheMac3.chr5 181051814 35 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCT i rheMac3.chr5 T 175 C 0 s macFas5.chr5 186389200 35 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004246 35 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCC i papAnu2.chr5 I 1 T 176 s chlSab2.chr7 132847378 35 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 35 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=11691.000000 s hg38.chr4_KI270785v1_alt 43706 4 + 119912 CGGA s panTro4.chr4 190312249 4 + 193495092 CGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278172 4 + 198332218 TGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249552 4 + 115148730 TGGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051849 4 + 184069350 CGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389235 4 + 189454096 CGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004105 4 + 178775436 CGGA i papAnu2.chr5 T 176 C 0 s chlSab2.chr7 132847413 4 + 135778131 CGGA i chlSab2.chr7 C 0 T 117 s calJac3.chr3 188231827 4 - 190850796 TGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=32197.000000 s hg38.chr4_KI270785v1_alt 43710 11 + 119912 CGCCACCATTT s panTro4.chr4 190312253 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278176 11 + 198332218 TGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249556 11 + 115148730 GGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051853 11 + 184069350 CGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389239 11 + 189454096 TGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004109 11 + 178775436 TGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847300 11 + 135778131 CGCCACCACTT i chlSab2.chr7 T 117 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=18604.000000 s hg38.chr4_KI270785v1_alt 43721 6 + 119912 CACATG s panTro4.chr4 190312264 6 + 193495092 CACATG i panTro4.chr4 C 0 T 530 s ponAbe2.chr4 195278187 6 + 198332218 CACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249567 6 + 115148730 CACATG i nomLeu3.chr7b C 0 T 412 s rheMac3.chr5 181051864 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389250 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004120 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847311 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-3114.000000 s hg38.chr4_KI270785v1_alt 43727 1 + 119912 -C s panTro4.chr4 190311740 1 + 193495092 -C i panTro4.chr4 T 530 C 0 s ponAbe2.chr4 195278193 1 + 198332218 -T i ponAbe2.chr4 C 0 I 236 s rheMac3.chr5 181051870 1 + 184069350 -C i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389256 1 + 189454096 -C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004126 1 + 178775436 -C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847317 1 + 135778131 -G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G- i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e nomLeu3.chr7b 111249573 412 + 115148730 T a score=165642.000000 s hg38.chr4_KI270785v1_alt 43728 57 + 119912 ATGAGACAGGCGACATGTGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCACAT s panTro4.chr4 190311741 56 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCC-GGACGCCACCATTTCACAT i panTro4.chr4 C 0 I 473 s ponAbe2.chr4 195278430 57 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 I 236 T 352 s nomLeu3.chr7b 111249161 57 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b T 412 C 0 s rheMac3.chr5 181051871 57 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389257 57 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004127 57 + 178775436 ATGAGGCAGGTGACATGCAAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847318 57 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 57 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=2800.000000 s hg38.chr4_KI270785v1_alt 43785 1 + 119912 G s panTro4.chr4 190312270 1 + 193495092 G i panTro4.chr4 I 473 T 354 s nomLeu3.chr7b 111249218 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051928 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389314 1 + 189454096 G i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004184 1 + 178775436 G i papAnu2.chr5 C 0 I 59 s chlSab2.chr7 132847375 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231847 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278487 352 + 198332218 T a score=890.000000 s hg38.chr4_KI270785v1_alt 43786 1 + 119912 A s panTro4.chr4 190311917 1 + 193495092 A i panTro4.chr4 T 354 C 0 s ponAbe2.chr4 195278135 1 + 198332218 A i ponAbe2.chr4 T 352 C 0 s nomLeu3.chr7b 111249219 1 + 115148730 G i nomLeu3.chr7b C 0 T 117 s rheMac3.chr5 181051929 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389316 1 + 189454096 A i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004244 1 + 178775436 A i papAnu2.chr5 I 59 C 0 s chlSab2.chr7 132847376 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=24797.000000 s hg38.chr4_KI270785v1_alt 43787 10 + 119912 AGAGGCAGGC s panTro4.chr4 190311918 10 + 193495092 AGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278136 10 + 198332218 AGAGGCAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249103 10 + 115148730 GGAGGGAGGT i nomLeu3.chr7b T 117 C 0 s rheMac3.chr5 181051930 10 + 184069350 GGAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389317 10 + 189454096 TGAGGCAGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004245 10 + 178775436 TGAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847377 10 + 135778131 GGAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231849 10 - 190850796 GGAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=78450.000000 s hg38.chr4_KI270785v1_alt 43797 27 + 119912 GACATGCGAGTGCTGAGGAGGAACCCT s panTro4.chr4 190311928 27 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 T 177 s ponAbe2.chr4 195278146 27 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249113 27 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 27 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389327 27 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004255 27 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 27 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 27 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=42560.000000 s hg38.chr4_KI270785v1_alt 43824 15 + 119912 GGATGCCACCATTTG s panTro4.chr4 190311778 15 + 193495092 GGACGCCACCATTTC i panTro4.chr4 T 177 C 0 s ponAbe2.chr4 195278173 15 + 198332218 GGATGCCACCATTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249140 15 + 115148730 GGAGGCCACCATTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051967 15 + 184069350 GGATGCCACCATTTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389354 15 + 189454096 GGATGCCACCATTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004282 15 + 178775436 AGATGCCAGCATTTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847414 15 + 135778131 GGACGCCACCATTTC i chlSab2.chr7 C 0 I 177 s calJac3.chr3 188231828 15 - 190850796 GGACACCACCATTTC i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=14358.000000 s hg38.chr4_KI270785v1_alt 43839 6 + 119912 ACATGG s panTro4.chr4 190311793 6 + 193495092 ACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278188 6 + 198332218 ACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249155 6 + 115148730 ACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051982 6 + 184069350 ACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389369 6 + 189454096 ACATGG i macFas5.chr5 C 0 T 118 s papAnu2.chr5 176004297 6 + 178775436 ACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847606 6 + 135778131 ACATGC i chlSab2.chr7 I 177 C 0 s calJac3.chr3 188231784 6 - 190850796 ATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=171356.000000 s hg38.chr4_KI270785v1_alt 43845 59 + 119912 AAGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGG s panTro4.chr4 190311799 59 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCCGGACGCCACCATTTCATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 59 + 198332218 AAGAGGCAGGTGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249161 59 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 59 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGG i rheMac3.chr5 T 117 T 59 s macFas5.chr5 186389257 59 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGC i macFas5.chr5 T 118 C 0 s papAnu2.chr5 176004303 59 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGG i papAnu2.chr5 C 0 T 174 s chlSab2.chr7 132847612 59 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACATGG i chlSab2.chr7 C 0 T 177 s calJac3.chr3 188231790 59 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-1755.000000 s hg38.chr4_KI270785v1_alt 43904 2 + 119912 -AA s panTro4.chr4 190311858 2 + 193495092 -AT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278253 2 + 198332218 -AA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249220 2 + 115148730 -AT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 2 + 184069350 -AT i rheMac3.chr5 T 59 I 1 s macFas5.chr5 186389316 2 + 189454096 -AT i macFas5.chr5 C 0 I 1 s chlSab2.chr7 132847494 2 + 135778131 -AT i chlSab2.chr7 T 177 I 1 s calJac3.chr3 188231849 2 - 190850796 GG- i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004362 174 + 178775436 T a score=100.000000 s hg38.chr4_KI270785v1_alt 43906 1 + 119912 C s panTro4.chr4 190311860 1 + 193495092 G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278255 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249222 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188231792 1 - 190850796 G i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847496 1 + 135778131 I e papAnu2.chr5 176004362 174 + 178775436 T e macFas5.chr5 186389318 1 + 189454096 I e rheMac3.chr5 181051873 1 + 184069350 I a score=162027.000000 s hg38.chr4_KI270785v1_alt 43907 56 + 119912 AGGCAGGCGACATGGGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATGG s panTro4.chr4 190311861 56 + 193495092 AGGCAGGCGACATGCGAGTGCTAGAGAGGAACCCCGGACGCCACCATTTCACAAGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278256 56 + 198332218 AGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249223 56 + 115148730 AGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCTGGAGGCCACCATTTCACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051874 56 + 184069350 AGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGG i rheMac3.chr5 I 1 T 118 s macFas5.chr5 186389319 56 + 189454096 AGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGG i macFas5.chr5 I 1 T 175 s papAnu2.chr5 176004188 56 + 178775436 AGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATGC i papAnu2.chr5 T 174 C 0 s chlSab2.chr7 132847497 56 + 135778131 AGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTTCACATGG i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231793 56 - 190850796 AGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-6505.000000 s hg38.chr4_KI270785v1_alt 43963 2 + 119912 AA- s panTro4.chr4 190311917 2 + 193495092 AA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278312 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249279 2 + 115148730 AT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 1 + 184069350 A-- i rheMac3.chr5 T 118 I 1 s papAnu2.chr5 176004244 1 + 178775436 A-- i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847553 1 + 135778131 A-- i chlSab2.chr7 C 0 I 1 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389375 175 + 189454096 T a score=75943.000000 s hg38.chr4_KI270785v1_alt 43965 25 + 119912 GAGGCAGGCGACATGCGAGTGCTGT s panTro4.chr4 190311919 25 + 193495092 GAGGCAGGCGACATGCGAGTGCTGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278314 25 + 198332218 GAGGCAGGCGACATGCGAGTGCTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249281 25 + 115148730 GAGGCAGGTGACATGCAAGTGCTGG i nomLeu3.chr7b C 0 T 59 s rheMac3.chr5 181051814 25 + 184069350 GAGGCAGGCGACATGCGAGTGCTGG i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389200 25 + 189454096 GAGGCAGGCGACATGCGAGTGCTGG i macFas5.chr5 T 175 C 0 s papAnu2.chr5 176004246 25 + 178775436 GAGGCAGGCGACATGCGAGTGCTGG i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847555 25 + 135778131 GAGGCAGGTGACATGCGAGTGCTAG i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231792 25 - 190850796 GAGGCAGGTGGCATGACAGTGCTGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=70317.000000 s hg38.chr4_KI270785v1_alt 43990 25 + 119912 GGAGGAACCCTGGATGCCACCATTT s panTro4.chr4 190311944 25 + 193495092 GGAGGAACCCTGGACACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278339 25 + 198332218 AGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249247 25 + 115148730 GGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b T 59 C 0 s rheMac3.chr5 181051839 25 + 184069350 AGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389225 25 + 189454096 AGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004271 25 + 178775436 AGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847580 25 + 135778131 AGAGGAACCCGGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231817 25 - 190850796 AGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10933.000000 s hg38.chr4_KI270785v1_alt 44015 4 + 119912 CACA s panTro4.chr4 190311969 4 + 193495092 CATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278364 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249272 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389250 4 + 189454096 CACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004296 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847605 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=9052.000000 s hg38.chr4_KI270785v1_alt 44019 5 + 119912 TGGAA s panTro4.chr4 190311973 5 + 193495092 TGCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278368 5 + 198332218 TGTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249276 5 + 115148730 TGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 5 + 184069350 TGGAT i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389254 5 + 189454096 TGCAT i macFas5.chr5 C 0 T 59 s papAnu2.chr5 176004300 5 + 178775436 TGCAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847609 5 + 135778131 TGCAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231787 5 - 190850796 TGGAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=148640.000000 s hg38.chr4_KI270785v1_alt 44024 50 + 119912 GAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCTGGATGCCACCATTT s panTro4.chr4 190311978 50 + 193495092 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278373 50 + 198332218 GAGGCAGGCGACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249281 50 + 115148730 GAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCTGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 50 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 50 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 T 59 T 176 s papAnu2.chr5 176004305 50 + 178775436 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847614 50 + 135778131 GAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 50 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=9668.000000 s hg38.chr4_KI270785v1_alt 44074 4 + 119912 CACA s panTro4.chr4 190312028 4 + 193495092 CATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 4 + 198332218 CACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249331 4 + 115148730 CACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 4 + 184069350 CACA i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389074 4 + 189454096 CATG i macFas5.chr5 T 176 C 0 s papAnu2.chr5 176004355 4 + 178775436 CACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847664 4 + 135778131 CACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 4 - 190850796 CATG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=8676.000000 s hg38.chr4_KI270785v1_alt 44078 3 + 119912 TGG s panTro4.chr4 190312032 3 + 193495092 TGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278427 3 + 198332218 TGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249335 3 + 115148730 TGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 3 + 184069350 TGG i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389078 3 + 189454096 TGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004359 3 + 178775436 TGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847668 3 + 135778131 TGG i chlSab2.chr7 C 0 T 59 s calJac3.chr3 188231787 3 - 190850796 TGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-9360.000000 s hg38.chr4_KI270785v1_alt 44081 2 + 119912 AA- s panTro4.chr4 190312035 2 + 193495092 AT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249338 2 + 115148730 AT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 1 + 184069350 A-- i rheMac3.chr5 C 0 I 1 s macFas5.chr5 186389081 1 + 189454096 A-- i macFas5.chr5 C 0 I 1 s papAnu2.chr5 176004362 1 + 178775436 G-- i papAnu2.chr5 C 0 T 117 s chlSab2.chr7 132847612 1 + 135778131 A-- i chlSab2.chr7 T 59 I 1 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=108164.000000 s hg38.chr4_KI270785v1_alt 44083 36 + 119912 GAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCT s panTro4.chr4 190312037 36 + 193495092 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278432 36 + 198332218 GAGGCAGGCGACATGCGAGTGCTGGGGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249340 36 + 115148730 GAGGCAGGCGACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051814 36 + 184069350 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTC i rheMac3.chr5 I 1 C 0 s macFas5.chr5 186389083 36 + 189454096 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTC i macFas5.chr5 I 1 C 0 s papAnu2.chr5 176004246 36 + 178775436 GAGGCAGGCGACATGCGAGTGCTGGAGAGGAGCCCC i papAnu2.chr5 T 117 I 176 s chlSab2.chr7 132847614 36 + 135778131 GAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCC i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231792 36 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=38299.000000 s hg38.chr4_KI270785v1_alt 44119 14 + 119912 GGACGCCACCATTT s panTro4.chr4 190312073 14 + 193495092 GGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278468 14 + 198332218 GGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249376 14 + 115148730 GAAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 14 + 184069350 GGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389119 14 + 189454096 GGACGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004458 14 + 178775436 AGATGCCAGCATTT i papAnu2.chr5 I 176 C 0 s chlSab2.chr7 132847650 14 + 135778131 AGACGCCACCTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 14 - 190850796 GGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=18154.000000 s hg38.chr4_KI270785v1_alt 44133 7 + 119912 CACATGG s panTro4.chr4 190312087 7 + 193495092 CACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278482 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249390 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389133 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004472 7 + 178775436 CACATGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847664 7 + 135778131 CACATGG i chlSab2.chr7 C 0 T 353 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=172013.000000 s hg38.chr4_KI270785v1_alt 44140 60 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGAA s panTro4.chr4 190312094 60 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTTCACATGCA i panTro4.chr4 C 0 T 176 s ponAbe2.chr4 195278489 60 + 198332218 AAGAGGCAGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATGGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249397 60 + 115148730 ATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTTCACATGGA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051871 60 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 60 + 189454096 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATGGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004479 60 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCAGCATTTCACATGGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847318 60 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATGGG i chlSab2.chr7 T 353 C 0 s calJac3.chr3 188231790 60 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATGGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=28197.000000 s hg38.chr4_KI270785v1_alt 44200 9 + 119912 GAGGCAGGC s panTro4.chr4 190311978 9 + 193495092 GAGGCAGGC i panTro4.chr4 T 176 C 0 s ponAbe2.chr4 195278549 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 C 0 T 294 s nomLeu3.chr7b 111249458 9 + 115148730 GAGGCAGGT i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004539 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847378 9 + 135778131 GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=125576.000000 s hg38.chr4_KI270785v1_alt 44209 41 + 119912 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT s panTro4.chr4 190311987 41 + 193495092 GACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278264 41 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 T 294 C 0 s nomLeu3.chr7b 111249467 41 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 41 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 41 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004548 41 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 41 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 41 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 58 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17809.000000 s hg38.chr4_KI270785v1_alt 44250 6 + 119912 CACATG s panTro4.chr4 190312028 6 + 193495092 CATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278305 6 + 198332218 CACATG i ponAbe2.chr4 C 0 I 59 s nomLeu3.chr7b 111249508 6 + 115148730 CACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 6 + 184069350 CACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389250 6 + 189454096 CACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004589 6 + 178775436 CACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847428 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 6 - 190850796 CATGTG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-1238.000000 s hg38.chr4_KI270785v1_alt 44256 1 + 119912 G s panTro4.chr4 190312034 1 + 193495092 C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278370 1 + 198332218 T i ponAbe2.chr4 I 59 C 0 s nomLeu3.chr7b 111249514 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 1 + 184069350 G i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389256 1 + 189454096 C i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004595 1 + 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847434 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=80566.000000 s hg38.chr4_KI270785v1_alt 44257 28 + 119912 AAGACGCAGGCGACATGCGAGTGCTGGA s panTro4.chr4 190312035 28 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278371 28 + 198332218 AAGAGGCAGGCGACTTGCGAGTGCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249515 28 + 115148730 ATGAGGCGGGTGACATGCGAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 28 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGA i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389257 28 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004596 28 + 178775436 ATGAGGCAGGCGACATGCGAGTGCTGGA i papAnu2.chr5 C 0 T 176 s chlSab2.chr7 132847435 28 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 28 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=30619.000000 s hg38.chr4_KI270785v1_alt 44285 10 + 119912 GAGGAACCCC s panTro4.chr4 190312063 10 + 193495092 GAGGAACCCC i panTro4.chr4 C 0 I 177 s ponAbe2.chr4 195278399 10 + 198332218 GAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249543 10 + 115148730 GAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 10 + 184069350 GAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389285 10 + 189454096 GAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004448 10 + 178775436 GAGGAGCCCC i papAnu2.chr5 T 176 C 0 s chlSab2.chr7 132847463 10 + 135778131 GAGGAACCCC i chlSab2.chr7 C 0 I 59 s calJac3.chr3 188231818 10 - 190850796 GAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=50786.000000 s hg38.chr4_KI270785v1_alt 44295 20 + 119912 GGGCGCCACCATTTCACAT-G s panTro4.chr4 190312250 21 + 193495092 GGACGCCACCATTTCACATGG i panTro4.chr4 I 177 C 0 s ponAbe2.chr4 195278409 21 + 198332218 GGACGCCACCATTTCACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249553 20 + 115148730 GGAGGCCACCATTTCACAT-G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 20 + 184069350 GGACGCCACCTTTTCACAT-G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389295 20 + 189454096 GGATGCCACCATTTCACAT-G i macFas5.chr5 C 0 T 175 s papAnu2.chr5 176004458 20 + 178775436 AGATGCCAGCATTTCACAT-G i papAnu2.chr5 C 0 I 1 s chlSab2.chr7 132847532 20 + 135778131 AGACGCCACCATTTCACAT-G i chlSab2.chr7 I 59 I 1 s calJac3.chr3 188231828 20 - 190850796 GGACACCACCATTTCCCAT-G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=24697.000000 s hg38.chr4_KI270785v1_alt 44315 10 + 119912 AAGAGGCAGG s panTro4.chr4 190312271 10 + 193495092 AAGAGGCAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 10 + 198332218 AAGAGGCAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249573 10 + 115148730 GGGAGGCTGG i nomLeu3.chr7b C 0 T 529 s rheMac3.chr5 181051929 10 + 184069350 GGGAGGCAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389140 10 + 189454096 ATGAGGCAGG i macFas5.chr5 T 175 C 0 s papAnu2.chr5 176004479 10 + 178775436 ATGAGGCAGG i papAnu2.chr5 I 1 C 0 s chlSab2.chr7 132847553 10 + 135778131 ATGAGGCAGG i chlSab2.chr7 I 1 C 0 s calJac3.chr3 188231848 10 - 190850796 GGGAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=133990.000000 s hg38.chr4_KI270785v1_alt 44325 47 + 119912 GGACATGCGAGTGCTGAGGAGGAACCCCGGGCGCCACCATTTCACAT s panTro4.chr4 190312281 47 + 193495092 CGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278440 47 + 198332218 CGACATGCGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 T 176 s nomLeu3.chr7b 111249054 47 + 115148730 TGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACAT i nomLeu3.chr7b T 529 C 0 s rheMac3.chr5 181051939 47 + 184069350 CGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389150 47 + 189454096 TGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004489 47 + 178775436 TGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847563 47 + 135778131 TGACATGCGAGTGCTAGAGAGGAACCCGGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 47 - 190850796 TGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCAT i calJac3.chr3 T 58 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=3600.000000 s hg38.chr4_KI270785v1_alt 44372 1 + 119912 G s panTro4.chr4 190312328 1 + 193495092 G i panTro4.chr4 C 0 T 292 s ponAbe2.chr4 195278311 1 + 198332218 G i ponAbe2.chr4 T 176 T 59 s nomLeu3.chr7b 111249101 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051986 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389197 1 + 189454096 G i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004536 1 + 178775436 G i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847610 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-2855.000000 s hg38.chr4_KI270785v1_alt 44373 2 + 119912 AA- s ponAbe2.chr4 195278253 2 + 198332218 AA- i ponAbe2.chr4 T 59 C 0 s nomLeu3.chr7b 111249102 2 + 115148730 GG- i nomLeu3.chr7b C 0 I 236 s rheMac3.chr5 181051987 2 + 184069350 GG- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004537 2 + 178775436 GG- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847611 2 + 135778131 CA- i chlSab2.chr7 C 0 T 235 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190312329 292 + 193495092 T a score=17676.000000 s hg38.chr4_KI270785v1_alt 44375 5 + 119912 GAGGC s panTro4.chr4 190312037 5 + 193495092 GAGGC i panTro4.chr4 T 292 C 0 s ponAbe2.chr4 195278255 5 + 198332218 GAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249340 5 + 115148730 GAGGC i nomLeu3.chr7b I 236 C 0 s rheMac3.chr5 181051989 5 + 184069350 GAGGC i rheMac3.chr5 C 0 T 58 s macFas5.chr5 186389200 5 + 189454096 GAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004539 5 + 178775436 GAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847378 5 + 135778131 GAGGC i chlSab2.chr7 T 235 C 0 s calJac3.chr3 188231792 5 - 190850796 GAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=145620.000000 s hg38.chr4_KI270785v1_alt 44380 49 + 119912 AGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACA s panTro4.chr4 190312042 49 + 193495092 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278260 49 + 198332218 AGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249345 49 + 115148730 AGGCGACATGCGAGTGCTAGGGAGGAACCCTGAAGGCCACCATTTCACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051936 49 + 184069350 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACA i rheMac3.chr5 T 58 T 176 s macFas5.chr5 186389205 49 + 189454096 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004544 49 + 178775436 AGGCGACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTTCACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 49 + 135778131 AGGTGACATGTCAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231797 49 - 190850796 AGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=7326.000000 s hg38.chr4_KI270785v1_alt 44429 3 + 119912 TGG s panTro4.chr4 190312091 3 + 193495092 TGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278309 3 + 198332218 TGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249394 3 + 115148730 TGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051809 3 + 184069350 TGG i rheMac3.chr5 T 176 C 0 s macFas5.chr5 186389254 3 + 189454096 TGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004593 3 + 178775436 TGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847432 3 + 135778131 TGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231846 3 - 190850796 TGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=153078.000000 s hg38.chr4_KI270785v1_alt 44432 52 + 119912 AAGAGGCAGGGGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190312094 52 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278312 52 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249397 52 + 115148730 ATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCCGGAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 52 + 184069350 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389257 52 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004596 52 + 178775436 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847435 52 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCCGGATGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 52 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 59 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=16571.000000 s hg38.chr4_KI270785v1_alt 44484 7 + 119912 CACATGG s panTro4.chr4 190312146 7 + 193495092 CACATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278364 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249449 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 7 + 184069350 CACATGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004648 7 + 178775436 CATATGG i papAnu2.chr5 C 0 T 176 s chlSab2.chr7 132847487 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=121750.000000 s hg38.chr4_KI270785v1_alt 44491 42 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGAC s panTro4.chr4 190312153 42 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGAC i panTro4.chr4 C 0 T 530 s ponAbe2.chr4 195278371 42 + 198332218 AAGAGGCAGGCGACTTGCGAGTGCTGGAGAGGAACCCTGGAC i ponAbe2.chr4 C 0 T 59 s nomLeu3.chr7b 111249456 42 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCCGGAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 42 + 184069350 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389316 42 + 189454096 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004479 42 + 178775436 ATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGAT i papAnu2.chr5 T 176 C 0 s chlSab2.chr7 132847494 42 + 135778131 ATGAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 42 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=47467.000000 s hg38.chr4_KI270785v1_alt 44533 18 + 119912 GCCACCATTTCACATGAA s panTro4.chr4 190311665 18 + 193495092 ACCACCATTTCATATGCA i panTro4.chr4 T 530 I 1 s ponAbe2.chr4 195278354 18 + 198332218 GCCACCATTTCACATGTA i ponAbe2.chr4 T 59 I 1 s nomLeu3.chr7b 111249498 18 + 115148730 GCCACCATTTCACATGGA i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051913 18 + 184069350 GCCACCTTTTCACATGGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389358 18 + 189454096 GCCACCATTTCACATGGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004521 18 + 178775436 GCCAGCATTTCACATGGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847536 18 + 135778131 GCCACCATTTCACATGGA i chlSab2.chr7 C 0 I 118 s calJac3.chr3 188231832 18 - 190850796 ACCACCATTTCCCATGGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=26199.000000 s hg38.chr4_KI270785v1_alt 44551 9 + 119912 GAGGCAGGC s panTro4.chr4 190311684 9 + 193495092 GAGGCAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278373 9 + 198332218 GAGGCAGGC i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249517 9 + 115148730 GAGGCGGGT i nomLeu3.chr7b I 1 C 0 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389376 9 + 189454096 GAGGCTGGC i macFas5.chr5 C 0 T 176 s papAnu2.chr5 176004539 9 + 178775436 GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847672 9 + 135778131 GAGGCAGGT i chlSab2.chr7 I 118 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=134243.000000 s hg38.chr4_KI270785v1_alt 44560 47 + 119912 GACATGCGTGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATG s panTro4.chr4 190311693 47 + 193495092 GACATGCGAGTGCTAGAGAGGAATCCCGGATGCCACCATTTCACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278382 47 + 198332218 GACTTGCGAGTGCTGGAGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249526 47 + 115148730 GACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 47 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 47 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i macFas5.chr5 T 176 T 57 s papAnu2.chr5 176004548 47 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCCCAGATGCCAGCATTTCACATG i papAnu2.chr5 C 0 T 175 s chlSab2.chr7 132847681 47 + 135778131 GACATGCGAGTGCTAGAGAGGAACCCCAGACGCCACCTTTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 47 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-72.000000 s hg38.chr4_KI270785v1_alt 44607 1 + 119912 A s panTro4.chr4 190311740 1 + 193495092 C i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278429 1 + 198332218 G i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249573 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051987 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176004420 1 + 178775436 A i papAnu2.chr5 T 175 C 0 s chlSab2.chr7 132847728 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389256 57 + 189454096 T a score=10645.000000 s hg38.chr4_KI270785v1_alt 44608 6 + 119912 A-GAGGC s panTro4.chr4 190311741 7 + 193495092 ATGAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 7 + 198332218 AAGAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249574 6 + 115148730 G-GAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051988 6 + 184069350 -GGAGGC i rheMac3.chr5 C 0 T 58 s macFas5.chr5 186389199 6 + 189454096 -GGAGGC i macFas5.chr5 T 57 C 0 s papAnu2.chr5 176004421 6 + 178775436 -TGAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847729 6 + 135778131 -GGAGGC i chlSab2.chr7 C 0 T 352 s calJac3.chr3 188231849 6 - 190850796 -GGAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10032.000000 s hg38.chr4_KI270785v1_alt 44614 4 + 119912 AGGC s panTro4.chr4 190311748 4 + 193495092 AGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278437 4 + 198332218 AGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249580 4 + 115148730 TGGC i nomLeu3.chr7b C 0 T 529 s rheMac3.chr5 181051936 4 + 184069350 AGGC i rheMac3.chr5 T 58 C 0 s macFas5.chr5 186389205 4 + 189454096 AGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004427 4 + 178775436 AGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847383 4 + 135778131 AGGT i chlSab2.chr7 T 352 C 0 s calJac3.chr3 188231855 4 - 190850796 TGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=77343.000000 s hg38.chr4_KI270785v1_alt 44618 26 + 119912 GACATGCGAGTGCTGAGGAGGAACCC s panTro4.chr4 190311752 26 + 193495092 GACATGCGAGTGCTGAGGAGAAACCC i panTro4.chr4 C 0 I 196 s ponAbe2.chr4 195278441 26 + 198332218 GACATGCGAGTGCTGGGGAGGAACCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249055 26 + 115148730 GACATGCGAGTGCTGGGGAGGAACCC i nomLeu3.chr7b T 529 C 0 s rheMac3.chr5 181051940 26 + 184069350 GACATGCGAGTGCTGGAGAGGAACCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 26 + 189454096 GACATGCGAGTGCTGGAGAGGAACCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004431 26 + 178775436 GACATGCGAGTGCTGGAGAGGAGCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 26 + 135778131 GACATGTCAGTGCTGGAGAGGAACCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 26 - 190850796 GGCATGACAGTGCTGGAGAGGAACCC i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=42743.000000 s hg38.chr4_KI270785v1_alt 44644 20 + 119912 TGGGCGCCACCATTTCACAT s ponAbe2.chr4 195278467 20 + 198332218 TGGACGCCACCATTTCACAT i ponAbe2.chr4 C 0 I 1 s nomLeu3.chr7b 111249081 20 + 115148730 TGGAGGCCACCATTTCACAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051966 20 + 184069350 CGGATGCCACCATTTCACAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389235 20 + 189454096 CGGATGCCACCATTTCACAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004457 20 + 178775436 CAGATGCCAGCATTTCACAT i papAnu2.chr5 C 0 T 468 s chlSab2.chr7 132847413 20 + 135778131 CGGACGCCACCATTTCACAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231827 20 - 190850796 TGGACACCACCATTTCCCAT i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e panTro4.chr4 190311778 196 + 193495092 I a score=3600.000000 s hg38.chr4_KI270785v1_alt 44664 1 + 119912 G s panTro4.chr4 190311974 1 + 193495092 G i panTro4.chr4 I 196 C 0 s ponAbe2.chr4 195278488 1 + 198332218 G i ponAbe2.chr4 I 1 C 0 s nomLeu3.chr7b 111249101 1 + 115148730 G i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051986 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389255 1 + 189454096 G i macFas5.chr5 C 0 T 58 s papAnu2.chr5 176004009 1 + 178775436 G i papAnu2.chr5 T 468 C 0 s chlSab2.chr7 132847433 1 + 135778131 G i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231789 1 - 190850796 G i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=-4221.000000 s hg38.chr4_KI270785v1_alt 44665 2 + 119912 AA- s panTro4.chr4 190311975 2 + 193495092 CA- i panTro4.chr4 C 0 I 1 s ponAbe2.chr4 195278489 2 + 198332218 AA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249102 2 + 115148730 GG- i nomLeu3.chr7b C 0 T 58 s rheMac3.chr5 181051987 2 + 184069350 GG- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 2 + 189454096 GG- i macFas5.chr5 T 58 C 0 s papAnu2.chr5 176004010 2 + 178775436 AC- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847434 2 + 135778131 GA- i chlSab2.chr7 C 0 T 116 s calJac3.chr3 188231790 2 - 190850796 -AT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=17676.000000 s hg38.chr4_KI270785v1_alt 44667 5 + 119912 GAGGC s panTro4.chr4 190311978 5 + 193495092 GAGGC i panTro4.chr4 I 1 C 0 s ponAbe2.chr4 195278491 5 + 198332218 GAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249046 5 + 115148730 GAGGC i nomLeu3.chr7b T 58 C 0 s rheMac3.chr5 181051989 5 + 184069350 GAGGC i rheMac3.chr5 C 0 T 116 s macFas5.chr5 186389200 5 + 189454096 GAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004012 5 + 178775436 GAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847320 5 + 135778131 GAGGC i chlSab2.chr7 T 116 C 0 s calJac3.chr3 188231792 5 - 190850796 GAGGC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=147359.000000 s hg38.chr4_KI270785v1_alt 44672 51 + 119912 AGGGGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTTCACATG s panTro4.chr4 190311983 51 + 193495092 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278496 51 + 198332218 AGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249051 51 + 115148730 AGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051878 51 + 184069350 AGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTTCACATG i rheMac3.chr5 T 116 C 0 s macFas5.chr5 186389205 51 + 189454096 AGGCGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTTCACATG i macFas5.chr5 C 0 T 47 s papAnu2.chr5 176004017 51 + 178775436 AGGCGACATGCGCGTGCTGGAGAGGAACCTCGGATGCCAGCATTTCACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847325 51 + 135778131 AGGTGACATGCGAGTGCTGGAGAGGAACCCCGGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231797 51 - 190850796 AGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=1669.000000 s hg38.chr4_KI270785v1_alt 44723 2 + 119912 AA s panTro4.chr4 190312034 2 + 193495092 CA i panTro4.chr4 C 0 I 60 s ponAbe2.chr4 195278547 2 + 198332218 GG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249102 2 + 115148730 GG i nomLeu3.chr7b C 0 I 118 s rheMac3.chr5 181051929 2 + 184069350 GG i rheMac3.chr5 C 0 T 117 s papAnu2.chr5 176004068 2 + 178775436 GG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847376 2 + 135778131 GG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 2 - 190850796 GG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389256 47 + 189454096 T a score=20398.000000 s hg38.chr4_KI270785v1_alt 44725 8 + 119912 GAGGCAGG s panTro4.chr4 190312096 8 + 193495092 GAGGCAGG i panTro4.chr4 I 60 C 0 s ponAbe2.chr4 195278549 8 + 198332218 GAGGCAGG i ponAbe2.chr4 C 0 T 276 s nomLeu3.chr7b 111249222 8 + 115148730 GAGGCAGG i nomLeu3.chr7b I 118 C 0 s rheMac3.chr5 181051814 8 + 184069350 GAGGCAGG i rheMac3.chr5 T 117 C 0 s papAnu2.chr5 176004070 8 + 178775436 GAGGCAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847378 8 + 135778131 GAGGCAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231850 8 - 190850796 GAGGCTGG i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389256 47 + 189454096 T a score=-285.000000 s hg38.chr4_KI270785v1_alt 44733 1 + 119912 G s panTro4.chr4 190312104 1 + 193495092 C i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111249230 1 + 115148730 C i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051822 1 + 184069350 C i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176004078 1 + 178775436 C i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847386 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231800 1 - 190850796 T i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e macFas5.chr5 186389256 47 + 189454096 T e ponAbe2.chr4 195278557 276 + 198332218 T a score=35688.000000 s hg38.chr4_KI270785v1_alt 44734 17 + 119912 GACATGCGAGTGCTGAG s panTro4.chr4 190312105 17 + 193495092 GACATGCGAGTGCTGAG i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111249231 17 + 115148730 GACATGCGAGTGCTAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051823 17 + 184069350 GACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 17 + 189454096 GACATGCGAGTGCTGGA i macFas5.chr5 T 47 C 0 s papAnu2.chr5 176004079 17 + 178775436 GACATGCGAGTGCTGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847387 17 + 135778131 GACATGTCAGTGCTGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 17 - 190850796 GGCATGACAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e ponAbe2.chr4 195278557 276 + 198332218 T a score=30222.000000 s hg38.chr4_KI270785v1_alt 44751 10 + 119912 GAGGAACCCT s panTro4.chr4 190312122 10 + 193495092 GAGAAACCCT i panTro4.chr4 C 0 T 59 s ponAbe2.chr4 195278281 10 + 198332218 GAGGAACCCT i ponAbe2.chr4 T 276 C 0 s nomLeu3.chr7b 111249248 10 + 115148730 GAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051840 10 + 184069350 GAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389226 10 + 189454096 GAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004096 10 + 178775436 GAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847404 10 + 135778131 GAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231818 10 - 190850796 GAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=10476.000000 s hg38.chr4_KI270785v1_alt 44761 3 + 119912 GGA s panTro4.chr4 190312073 3 + 193495092 GGA i panTro4.chr4 T 59 C 0 s ponAbe2.chr4 195278291 3 + 198332218 GGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249258 3 + 115148730 GGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051850 3 + 184069350 GGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389236 3 + 189454096 GGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004106 3 + 178775436 GGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847414 3 + 135778131 GGA i chlSab2.chr7 C 0 T 117 s calJac3.chr3 188231828 3 - 190850796 GGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=32597.000000 s hg38.chr4_KI270785v1_alt 44764 11 + 119912 CGCCACCATTT s panTro4.chr4 190312076 11 + 193495092 CGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278294 11 + 198332218 CGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249261 11 + 115148730 GGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051853 11 + 184069350 CGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389239 11 + 189454096 TGCCACCATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004109 11 + 178775436 TGCCACCATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847300 11 + 135778131 CGCCACCACTT i chlSab2.chr7 T 117 C 0 s calJac3.chr3 188231831 11 - 190850796 CACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=128991.000000 s hg38.chr4_KI270785v1_alt 44775 45 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCT s panTro4.chr4 190312087 45 + 193495092 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278305 45 + 198332218 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249272 45 + 115148730 CACATGGATGAGGCAGGTGACATGCAAGTGCTGGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 45 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389250 45 + 189454096 CACATGCATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 T 117 s papAnu2.chr5 176004120 45 + 178775436 CACATGCATGAGGCAGGTGACATGCAAGTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847311 45 + 135778131 CACATGGATGAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 45 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=60694.000000 s hg38.chr4_KI270785v1_alt 44820 20 + 119912 GGACGCCACCATTTCACATG s panTro4.chr4 190312132 20 + 193495092 GGACGCCACCATTTCACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278350 20 + 198332218 GGACGCCACCATTTCACATG i ponAbe2.chr4 C 0 T 235 s nomLeu3.chr7b 111249317 20 + 115148730 GGAGGCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 20 + 184069350 GGACGCCACCTTTTCACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389178 20 + 189454096 GGACGCCACCTTTTCACATG i macFas5.chr5 T 117 C 0 s papAnu2.chr5 176004165 20 + 178775436 GGATGCCACCATTTCACATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847356 20 + 135778131 GGACGCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 20 - 190850796 GGACACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=24230.000000 s hg38.chr4_KI270785v1_alt 44840 11 + 119912 AA-GAGGCAGGC s panTro4.chr4 190312152 12 + 193495092 CATGAGGCAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278135 11 + 198332218 AA-GAGGCAGGC i ponAbe2.chr4 T 235 C 0 s nomLeu3.chr7b 111249337 12 + 115148730 GATGAGGCAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051929 11 + 184069350 GG-GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389198 11 + 189454096 GG-GAGGCAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004185 11 + 178775436 GG-GAGGCAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847376 11 + 135778131 GG-GAGGCAGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 11 - 190850796 GG-GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=79426.000000 s hg38.chr4_KI270785v1_alt 44851 27 + 119912 GACATGCGAGTGCTGAGGAGGAACCCT s panTro4.chr4 190312164 27 + 193495092 GACATGCGAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278146 27 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249349 27 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051940 27 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 27 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004196 27 + 178775436 GACATGCGAGTGCTGGAGAGGAACCCC i papAnu2.chr5 C 0 I 401 s chlSab2.chr7 132847387 27 + 135778131 GACATGTCAGTGCTGGAGAGGAACCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231801 27 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I a score=32033.000000 s hg38.chr4_KI270785v1_alt 44878 14 + 119912 GGATGCCACCATTT s panTro4.chr4 190312191 14 + 193495092 GGACACCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278173 14 + 198332218 GGATGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249376 14 + 115148730 GAAGGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051967 14 + 184069350 GGATGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389236 14 + 189454096 GGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847414 14 + 135778131 GGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 14 - 190850796 GGACACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=12827.000000 s hg38.chr4_KI270785v1_alt 44892 7 + 119912 CACATGG s panTro4.chr4 190312205 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278187 7 + 198332218 CACATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249390 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 117 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847428 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=2548.000000 s hg38.chr4_KI270785v1_alt 44899 1 + 119912 A s panTro4.chr4 190312212 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278194 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249397 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051871 1 + 184069350 A i rheMac3.chr5 T 117 C 0 s macFas5.chr5 186389257 1 + 189454096 A i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847435 1 + 135778131 A i chlSab2.chr7 C 0 I 235 s calJac3.chr3 188231790 1 - 190850796 A i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=59993.000000 s hg38.chr4_KI270785v1_alt 44900 27 + 119912 AGAGGCAGGTGACATGCGAGTGCTGGA s panTro4.chr4 190312213 27 + 193495092 TGAGGCAGGCGACATGCGAGTGCTGGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278195 27 + 198332218 AGAGGCAGGTGACTTGCGAGTGCTGGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249398 27 + 115148730 TGAGGCAGGTGACATGCAAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051872 27 + 184069350 TGAGGCAGGTGACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389258 27 + 189454096 TGAGGCAGGCGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847671 27 + 135778131 GGAGGCAGGTGACATGCGAGTGCTAGA i chlSab2.chr7 I 235 T 235 s calJac3.chr3 188231791 27 - 190850796 TGAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=24746.000000 s hg38.chr4_KI270785v1_alt 44927 10 + 119912 GAGGAACCCC s panTro4.chr4 190312240 10 + 193495092 GAGGAACCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278222 10 + 198332218 GAGGAACCCT i ponAbe2.chr4 C 0 I 236 s nomLeu3.chr7b 111249425 10 + 115148730 GAGGAACCCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 10 + 184069350 GAGGAACCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389285 10 + 189454096 GAGGAACCCC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847463 10 + 135778131 GAGGAACCCC i chlSab2.chr7 T 235 C 0 s calJac3.chr3 188231818 10 - 190850796 GAGGAACCCT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=47997.000000 s hg38.chr4_KI270785v1_alt 44937 23 + 119912 GGACGCCACCATTTCACATGGAA s panTro4.chr4 190312250 23 + 193495092 GGACGCCACCATTTCACATGGAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278468 23 + 198332218 GGACGCCACCATTTCACATGGAA i ponAbe2.chr4 I 236 C 0 s nomLeu3.chr7b 111249435 23 + 115148730 GGAGGCCACCATTTCACATGGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051909 23 + 184069350 GGACGCCACCTTTTCACATGGGG i rheMac3.chr5 C 0 T 59 s macFas5.chr5 186389295 23 + 189454096 GGATGCCACCATTTCACATGCAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847473 23 + 135778131 GGATGCCACCATTTCACATGGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231828 23 - 190850796 GGACACCACCATTTCCCATGGGG i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=113740.000000 s hg38.chr4_KI270785v1_alt 44960 50 + 119912 CAGGCAGGCGACATGGGAGTGCTGAGGAGGAACCCTGGACGCCACCATTT s panTro4.chr4 190312273 50 + 193495092 GAGGCAGGCGACATGCGAGTGCTGAGGAGGAACCCTGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278491 50 + 198332218 GAGGCAGGTGACATGGGAGTGCTGGGGAGGAACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249458 50 + 115148730 GAGGCAGGTGACATGCGAGTGCTGGGGAGGAACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051873 50 + 184069350 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCTCGGACGCCACCTTTT i rheMac3.chr5 T 59 C 0 s macFas5.chr5 186389318 50 + 189454096 GAGGCAGGTGACATGCGAGTGCTGGAGAGGAACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847496 50 + 135778131 GAGGCAGGTGACATGTCAGTGCTGGAGAGGAACCCCAGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231792 50 - 190850796 GAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGACACCACCATTT i calJac3.chr3 T 59 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=17073.000000 s hg38.chr4_KI270785v1_alt 45010 7 + 119912 CACATGG s panTro4.chr4 190312323 7 + 193495092 CACATGG i panTro4.chr4 C 0 T 236 s ponAbe2.chr4 195278541 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 T 236 s nomLeu3.chr7b 111249508 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051923 7 + 184069350 CACATGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389368 7 + 189454096 CACATGG i macFas5.chr5 C 0 T 118 s chlSab2.chr7 132847546 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=67718.000000 s hg38.chr4_KI270785v1_alt 45017 42 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGTGGAGGAACCCTGGAT s panTro4.chr4 190312094 42 + 193495092 AAGAGGCAGGCGACATGCGAGTGCTGAGGAGAAACCCTGGAC i panTro4.chr4 T 236 C 0 s ponAbe2.chr4 195278312 42 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCTGGAC i ponAbe2.chr4 T 236 C 0 s nomLeu3.chr7b 111249515 42 + 115148730 ATGAGGCGGGTGACATGCGAGTGCTGGGGAGGAACCCTGGAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389257 42 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGGAACCCCGGAT i macFas5.chr5 T 118 T 117 s chlSab2.chr7 132847553 42 + 135778131 ATGAGGCAGGTGACATGCGAGTGCTAGAGAGGAACCCGGGAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 42 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGGAACCCTGGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I e rheMac3.chr5 181051930 0 + 184069350 C a score=28788.000000 s hg38.chr4_KI270785v1_alt 45059 16 + 119912 GCCACCATTTCACATG s panTro4.chr4 190312136 16 + 193495092 GCCACCATTTCACATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278354 16 + 198332218 GCCACCATTTCACATG i ponAbe2.chr4 C 0 T 47 s nomLeu3.chr7b 111249557 16 + 115148730 GCCACCATTTCACATG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389182 16 + 189454096 GCCACCTTTTCACATG i macFas5.chr5 T 117 C 0 s chlSab2.chr7 132847595 16 + 135778131 GCCACCATTTCACATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 16 - 190850796 ACCACCATTTCCCATG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I e rheMac3.chr5 181051930 0 + 184069350 C a score=-590.000000 s hg38.chr4_KI270785v1_alt 45075 1 + 119912 A s panTro4.chr4 190312152 1 + 193495092 C i panTro4.chr4 C 0 C 0 s macFas5.chr5 186389198 1 + 189454096 G i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847611 1 + 135778131 C i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231848 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I e rheMac3.chr5 181051930 0 + 184069350 C e nomLeu3.chr7b 111249573 0 + 115148730 C e ponAbe2.chr4 195278370 47 + 198332218 T a score=501.000000 s hg38.chr4_KI270785v1_alt 45076 1 + 119912 A s panTro4.chr4 190312153 1 + 193495092 A i panTro4.chr4 C 0 T 764 s nomLeu3.chr7b 111249573 1 + 115148730 G i nomLeu3.chr7b C 0 I 1 s rheMac3.chr5 181051930 1 + 184069350 G i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389199 1 + 189454096 G i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847612 1 + 135778131 A i chlSab2.chr7 C 0 T 140 s calJac3.chr3 188231849 1 - 190850796 G i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I e ponAbe2.chr4 195278370 47 + 198332218 T a score=11518.000000 s hg38.chr4_KI270785v1_alt 45077 9 + 119912 GAGGCAGGC s panTro4.chr4 190311390 9 + 193495092 GAGGCAGGC i panTro4.chr4 T 764 C 0 s nomLeu3.chr7b 111249575 9 + 115148730 GAGGCTGGC i nomLeu3.chr7b I 1 T 471 s rheMac3.chr5 181051931 9 + 184069350 GAGGCAGGC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389200 9 + 189454096 GAGGCAGGC i macFas5.chr5 C 0 C 0 s calJac3.chr3 188231850 9 - 190850796 GAGGCTGGC i calJac3.chr3 C 0 T 58 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847613 140 + 135778131 T e papAnu2.chr5 176004223 401 + 178775436 I e ponAbe2.chr4 195278370 47 + 198332218 T a score=43803.000000 s hg38.chr4_KI270785v1_alt 45086 27 + 119912 GACATGCGAGTTCTGTGGAGGAACCCT s panTro4.chr4 190311399 27 + 193495092 AACATGCGAGTGCTGAGGAGGAACCCT i panTro4.chr4 C 0 I 352 s ponAbe2.chr4 195278323 27 + 198332218 GACATGCGAGTGCTGGAGAGGAACCCT i ponAbe2.chr4 T 47 C 0 s nomLeu3.chr7b 111249113 27 + 115148730 GACATGCGAGTGCTAGGGAGGAACCCT i nomLeu3.chr7b T 471 I 295 s rheMac3.chr5 181051940 27 + 184069350 GACATGCGAGTGCTGGAGAGGAACCCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389209 27 + 189454096 GACATGCGAGTGCTGGAGAGGAACCCC i macFas5.chr5 C 0 C 0 s calJac3.chr3 188231801 27 - 190850796 GGCATGACAGTGCTGGAGAGGAACCCT i calJac3.chr3 T 58 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e chlSab2.chr7 132847613 140 + 135778131 T e papAnu2.chr5 176004223 401 + 178775436 I a score=7791.000000 s hg38.chr4_KI270785v1_alt 45113 4 + 119912 GGAT s panTro4.chr4 190311778 4 + 193495092 GGAC i panTro4.chr4 I 352 I 413 s ponAbe2.chr4 195278350 4 + 198332218 GGAC i ponAbe2.chr4 C 0 I 59 s nomLeu3.chr7b 111249435 4 + 115148730 GGAG i nomLeu3.chr7b I 295 C 0 s rheMac3.chr5 181051967 4 + 184069350 GGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389236 4 + 189454096 GGAT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847473 4 + 135778131 GGAT i chlSab2.chr7 T 140 C 0 s calJac3.chr3 188231828 4 - 190850796 GGAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=25159.000000 s hg38.chr4_KI270785v1_alt 45117 10 + 119912 GCCACCATTT s panTro4.chr4 190312195 10 + 193495092 ACCACCATTT i panTro4.chr4 I 413 C 0 s ponAbe2.chr4 195278413 10 + 198332218 GCCACCATTT i ponAbe2.chr4 I 59 C 0 s nomLeu3.chr7b 111249439 10 + 115148730 GCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051971 10 + 184069350 GCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389240 10 + 189454096 GCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847477 10 + 135778131 GCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231832 10 - 190850796 ACCACCATTT i calJac3.chr3 C 0 T 59 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=13709.000000 s hg38.chr4_KI270785v1_alt 45127 7 + 119912 CACATGG s panTro4.chr4 190312205 7 + 193495092 CATATGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278423 7 + 198332218 CACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249449 7 + 115148730 CACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051981 7 + 184069350 CACATGG i rheMac3.chr5 C 0 T 176 s macFas5.chr5 186389250 7 + 189454096 CACATGC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847487 7 + 135778131 CACATGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231783 7 - 190850796 CATGTGG i calJac3.chr3 T 59 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=72868.000000 s hg38.chr4_KI270785v1_alt 45134 32 + 119912 AAGAGGCAGGCGACATGCGAGTGCTGTGGAGG s panTro4.chr4 190312212 32 + 193495092 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278430 32 + 198332218 AAGAGGCAGGCGACATGCGAGTGCTGGGGAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249456 32 + 115148730 ATGAGGCAGGTGACATGCGAGTGCTGGGGAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051812 32 + 184069350 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGG i rheMac3.chr5 T 176 C 0 s macFas5.chr5 186389257 32 + 189454096 ATGAGGCAGGCGACATGCGAGTGCTGGAGAGG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847494 32 + 135778131 ATGAGGCAGGTGACATGTCAGTGCTGGAGAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231790 32 - 190850796 ATGAGGCAGGTGGCATGACAGTGCTGGAGAGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15723926 0 - 59632846 C e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=50649.000000 s hg38.chr4_KI270785v1_alt 45166 20 + 119912 AACCCCGGACGCCACCATTT s panTro4.chr4 190312244 20 + 193495092 AACCCCGGACGCCACCATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278462 20 + 198332218 AACCCTGGACGCCACCATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249488 20 + 115148730 AACCCCGGACGCCACCATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051844 20 + 184069350 AACCTCGGACGCCACCATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389289 20 + 189454096 AACCCCGGATGCCACCATTT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847526 20 + 135778131 AACCCCAGACGCCACCATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231822 20 - 190850796 AACCCTGGACACCACCATTT i calJac3.chr3 C 0 T 59 s canFam3.chr16 15723926 17 - 59632846 AGCCCTTGTCGGCACCA--- i canFam3.chr16 C 0 C 0 e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=85245.000000 s hg38.chr4_KI270785v1_alt 45186 35 + 119912 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGTG s panTro4.chr4 190312264 35 + 193495092 CACATGGAAGAGGCAGGCGACATGCGAGTGCTGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278482 35 + 198332218 CACATGGAAGAGGCAGGTGACATGGGAGTGCTGGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249508 35 + 115148730 CACATGGATGAGGCGGGTGACATGCGAGTGCTGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051864 35 + 184069350 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389309 35 + 189454096 CACATGCATGAGGCAGGTGACATGCGAGTGCTGGA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132847546 35 + 135778131 CACATGGATGAGGCAGGTGACATGCGAGTGCTAGA i chlSab2.chr7 C 0 I 117 s calJac3.chr3 188231783 35 - 190850796 CATGTGGATGAGGCAGGTGGCATGACAGTGCTGGA i calJac3.chr3 T 59 C 0 s canFam3.chr16 15723943 31 - 59632846 ---ATGGATGAGGCAGGTGACATGAGAATGGAGG- i canFam3.chr16 C 0 C 0 e mm10.chr8 84714172 26 - 129401213 I e papAnu2.chr5 176004223 401 + 178775436 I a score=76101.000000 s hg38.chr4_KI270785v1_alt 45221 25 + 119912 GAGGAACCCCGGACGCCACCATTTC s panTro4.chr4 190312299 25 + 193495092 GAGGAACCCTGGACGCCACCATTTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278517 25 + 198332218 GAGGAACCCTGGACGCCACCATTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249543 25 + 115148730 GAGGAACCCTGGAGGCCACCATTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051899 25 + 184069350 GAGGAACCTCGGACGCCACCTTTTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186389344 25 + 189454096 GAGGAACCCCGGATGCCACCATTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004624 25 + 178775436 GAGGAACCCCGGATGCCACCATTTC i papAnu2.chr5 I 401 C 0 s chlSab2.chr7 132847698 25 + 135778131 GAGGAACCCCAGACGCCACCTTTTC i chlSab2.chr7 I 117 C 0 s calJac3.chr3 188231818 25 - 190850796 GAGGAACCCTGGACACCACCATTTC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15723974 25 - 59632846 AAAGAGCACTGTTAGCTTCCACTGA i canFam3.chr16 C 0 C 0 e mm10.chr8 84714172 26 - 129401213 I a score=43068.000000 s hg38.chr4_KI270785v1_alt 45246 12 + 119912 ACATGGGAAGGC s panTro4.chr4 190312324 12 + 193495092 ACATGGGAAGGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278542 12 + 198332218 ACATGGGGAGGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249568 12 + 115148730 ACATGGGGAGGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181051924 12 + 184069350 ACATGGGGAGGC i rheMac3.chr5 C 0 I 263 s macFas5.chr5 186389369 12 + 189454096 ACATGGGGAGGC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004649 12 + 178775436 ATATGGGGAGGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847723 12 + 135778131 ACATGGGGAGGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231843 12 - 190850796 CCATGGGGAGGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84714198 12 - 129401213 ACAGGGGAGGGT i mm10.chr8 I 26 I 2 s canFam3.chr16 15723999 12 - 59632846 AAGAGAAGAGTC i canFam3.chr16 C 0 C 0 a score=52447.000000 s hg38.chr4_KI270785v1_alt 45258 21 + 119912 CGGCTTCCTCT--TTGCTAATGA- s panTro4.chr4 190312336 21 + 193495092 CGGCTTCTTCT--TTGCTAATGA- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278554 21 + 198332218 AGGCTTCCTCT--TTGCTAATGA- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249580 21 + 115148730 TGGCTTCCTCT--TTGCTGATGA- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389381 21 + 189454096 TGGCTTCCTCT--TTGCGGATGA- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004661 21 + 178775436 AGGCTTCCTCT--TTGCTGATGA- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847735 21 + 135778131 TGGCTTCCTCT--TTGCTGATGA- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231855 21 - 190850796 TGGCTTCCTCT--GTGCTAATGA- i calJac3.chr3 C 0 C 0 s mm10.chr8 84714212 21 - 129401213 CGCCCTCTTCT--TGGCTGCGGG- i mm10.chr8 I 2 I 5 s canFam3.chr16 15724011 24 - 59632846 TGGCTTCTTCTGATTGCTTAATAG i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181051936 263 + 184069350 I a score=2300.000000 s hg38.chr4_KI270785v1_alt 45279 1 + 119912 A s panTro4.chr4 190312357 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278575 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249601 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389402 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004682 1 + 178775436 A i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847756 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s mm10.chr8 84714238 1 - 129401213 A i mm10.chr8 I 5 C 0 s canFam3.chr16 15724035 1 - 59632846 G i canFam3.chr16 C 0 C 0 e calJac3.chr3 188231876 0 - 190850796 C e rheMac3.chr5 181051936 263 + 184069350 I a score=435827.000000 s hg38.chr4_KI270785v1_alt 45280 165 + 119912 TGAGATAATTACAACAGAATCAAGCCAACCCCAG--AAAGCGCAGCGCCTGGGCAGAAGAAATGGGATGTTCACTGGGTGGCAGT------ATTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAATAATACAGGTTCTTTCCTTTACGTCATTTCC------G--------TATATCCTA s panTro4.chr4 190312358 165 + 193495092 TGAGATAATTACAACAGAATCAAGCCAACCCCAG--AAAGCGCAGCGCCTGGGCAGAAGAAATGGGAAGTTCACTGGGTGGCAGT------GTTGGGAACTGAGGTGGAAATAGAGCATTCCAGATTTGCAATAATACAGGTTCTTTCCTTTAAGTCTTTTCC------G--------TATATCCTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278576 165 + 198332218 CGAGATAATTACAACAGAATCAAGCCGACCACAG--AAAGCGCAGTGCCTGGGCAGAAGAAACGGGAGGTTCACTGGGTGGGAGT------GTTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAATAATATAGGTTCTTTCCTTTAAGTCATTTCC------G--------TATATCCTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249602 171 + 115148730 TGAGATAATTATAACAGAATCAAGCCGACCCCAG--AAAGCGCAGCACCTGGGCAGAAGAAATGGGAAGTTCACTGGGTGGCAGT------ATTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAGTAATATAGGTTGTTTCCTTTAAGTCATATCCTAAAAAG--------TATCTCCTA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389403 165 + 189454096 TGAGATAATTACAACAGAAGCAAGCAGACCCCAG--AAAGCGCAGTGCCTGGGCAGAAAAAATGGGAAGTTCACTGGGTGGCAGT------GTTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAGTGATATAGGTTCTTTCCTTTAAGTCATTTCC------A--------TATCTCTTA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004683 160 + 178775436 TGAGATAATTACAACAGAAGCAAGCAGACCCCAG--AAAGCGCAGTGCCTGGGCAGAAAAAATGGGAAGTTCACTGGGTGGCAGT------GTTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAATGATATAGGTT-----CTTTAAGTCATTTCC------A--------TATCTCTTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847757 165 + 135778131 TGAGATAATTACAACAGAAGCAAGCAGACCCCAG--AAAGTGCAGCGCCTGGGCAGAAAAAATGGGAAGTTCACTGGGTGGCAGT------GTTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAATGATATAGGTTCTTTCCTTTAAGTCATTTCC------A--------TATCTCCTA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188231876 165 - 190850796 CAAGATAATGACAACAAAAGAAAGCAGACCCCAG--AAAGAACAGGGCCTGGGCAGAAGAAATGGGAAGTTCAGTGGGTGACAGT------GTTGGGAACTGAGGTAGAAATAGAGCATTCCAGATTTGCAGTAATAAAGCTTCTTTCTTGTAAGTCATTTCC------A--------TATTTTCTA i calJac3.chr3 C 0 C 0 s mm10.chr8 84714239 161 - 129401213 TGTGACAATGTCCAAAGA------------------GAAAAGCAGGGTCAGGGCAGAAAAA--GCTAGGCTCAGTGAGTACCTGGAACCCAAATGAGACTTACAGCAGAAAAAGAGAATTTCAGCTCTGCAGTGGTAGAGGCTCCTCTGTCTAAGCCATTTCC------GGTCTCCTCCATGTCCTA i mm10.chr8 C 0 I 165 s canFam3.chr16 15724036 166 - 59632846 CAAGATAATTACAACAGATGGAAGCAGTATCCAGAAAAAACCCAATGTATATGAGGACAGAATGAGGAGTTCAGTGATGGGCAGG------ATTGGGTCCT-TTGTGGAAATAAATGCTTCCAGTTTTGCAATAGTAGTGGCTCTTCTTTCTAAGTCATTTCT------G--------TACCTCCTG i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181051936 263 + 184069350 I a score=39685.000000 s hg38.chr4_KI270785v1_alt 45445 21 + 119912 AAAAGAGGAGCAGGAGggcac s panTro4.chr4 190312523 21 + 193495092 AAAAGAGGAGCAGGAGggcac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278741 21 + 198332218 AAAAGAGGAGCGGGAGGGCAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249773 21 + 115148730 AAAAGACGAGCGGGAGAGCAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186389568 18 + 189454096 AAAAGACGAGCGGGAGAG--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004843 18 + 178775436 AAAAGACGAGCGGGAGAG--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847922 18 + 135778131 AAAAGACGAGCGGGAGAG--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188232041 21 - 190850796 AAAAGAGGAGCAGGAGAGTAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84714565 21 - 129401213 aagggggtggggggagtggtc i mm10.chr8 I 165 C 0 s canFam3.chr16 15724202 21 - 59632846 AATATACTTGGAGGAGAGCAT i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181051936 263 + 184069350 I a score=1545706.000000 s hg38.chr4_KI270785v1_alt 45466 457 + 119912 at------------------------------------actaggtctaagcttccatctctactcctaaagga-atactactagct-gaggtagtccatactcccagcagaatttgagctcataggaagag-------agaa-------aaaaatatatctgaggaggagtactagccctttaaaagaaaaatagatac--tgaagaatcttatcagagagagctgaattaatggtccagataaaacaagaactggaaataaa----ataaatatcttcagagagcaggaaaggatattgcaaatatgaagcaggaacaa----tcagtgaagacaaagaatcaaatgaggatggg-----aataaaacatataatagcaaaatgtatatagacaaagaataaatcagtaagataaagaatctggtt-ggaaaattttccc-c--aagtttaaataaaggcata-aaagatggaaaatatcta---agaac---taaaataaagagaaac--taaaagtggaaaggtcaattttgat s panTro4.chr4 190312544 457 + 193495092 at------------------------------------actaggtctaagcttccatctctactcctaaagga-atactactagct-gaggtagtccatactcccagcagaatctgagctcataggaagag-------agaa-------aaaaatatatctgaggaggagtactagacttttaaaagaaaaatagatac--tgaagaatcttatcagagagagctgaattaatggtccagataaaacaagaactggaaataaa----ataaatatcttcagagagcaggaaaggatattgcaaatatgaagcaggaacaa----tcagtgaagacaaagaatcaaatgAGGATGGG-----AATAAATCATCTAATAGCAAAATGTATATAGACAAAGAATAAATCAGTAAGATAAAGAATCTGGTT-GGAAAATTTTCCC-C--AAGTTTAAATAAAGGCATA-AAAGATGGAAAATATCTG---AGAAC---TAAAATAAAGAGAAAC--TAAAAGTGGAAAGGTCAATTTTGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195278762 461 + 198332218 AT------------------------------------ACTAGGTCTAAGCTTCCATCTCTACTCCTATAGGA-ATACTACTAGCT-GAGGTAGTCCACAGTCCTACCAGAATTTGATCTCATAGGAAGAG-------AGAA-------AAAAATACATCTGAGGAGGAGTACTAGCCCTTTAAAAGAAAAATAGATAC--TGAAGAATCTTATCAGAGAGAGCTGAATTAATGGCCCAGATAAAACAAGAATTTGAAATaaataagataaatatcttcagagagcaggaaagcatattgctaatatgaagcaggaacaa----tcagtgaagacaaagaatcaaatgaggtcggg-----aataaaacatataatagcaaaatggatatagacaaagaataaatcagtaagatagagaatctggtt-ggaaaattttccc-c--aagtttaaataaaggcata-aaagatggaaaatatcta---agaac---taaaataaagggaaac--taaaagTGGAAAGGTCAATTTTGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111249794 460 + 115148730 AT------------------------------------GCTATGTCTACGCTTCCATCTCTACtcctcaagga-atactactagct-gaggtagtccatagtcctagcagaatctgagctcataggaagag-------agaa-------aaaaatatgtctgaggaggagtactagccctttaaaagaaaaatagctac--tgaagaatcttatcagagagagctgaattaa-ggcacagataaaacaagaatttgaaataaataagataaatatcttcagagagcaggaaaggatattgcaaatatgaagcaggaacaa----tcagtggagacaaagaatcaaatgaggatggg-----aataaaacatatcatagcgaaatGGATATAGACAAAGAATAAATCAGTAAGATAAAGAATCTGGTT-GGAAAATTTTCCC-C--AAGTTTAAACAGAGGCATA-AAAGATGGAAAATATCta---agaac---taaaataaagagaaag--taaaagtagaaagGTCAATTTTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181052199 457 + 184069350 AT------------------------------------GCTAGGTCTAAGCTTCCCTCTGTACTCCTAAAGGA-ATACTGCTAGCT-GGGGTGCTCCATAGAcctagcggaatttgagctcataggaagag-------agaa-------aaaagtctatctaaggaggagtactagccctttaaaagaaaaatagatac--tgaagaatcttatcagagagagctgaattaatggcccagataaaacaagaatttgaaataaataagataaatatcttcagcgagcaggaaaggatattgcaaatatgaagcaggaacca----tcagtgaagacaaataatcaaataagaatggg-----aataaaacatataatagCACAGTGGATATAGACAAAGAATAAATCAGTAAGATAAAGAATCTGGTT-GGAAAATTTTTCC-C--AAGTTTAAATAAAGGCATA-AAAGATGGAAAATATCTA---AGAAC---TAAAATA----GAAAG--TAAAAGCAGAAAGGTCAATTTTGAT i rheMac3.chr5 I 263 C 0 s macFas5.chr5 186389586 457 + 189454096 AT------------------------------------GCTAGGTCTAAGCTTCCCTCTGTACTCCTAAAGGA-ATACTGCTAGCT-GGGGTGCTCCATAGAcctagcggaatttgagctcataggaagag-------agaa-------aaaagtctatctaaggaggagtactagccctttaaaagaaaaatagatac--tgaagaatcttatcagagagagctgaattaatggcccagataaaacaagaatttgaaataaataagataaatatcttcagcgagcaggaaaggatattgcaaatatgaagcaggaacaa----tcagtgaagacaaataatcaaataagaatggg-----aataaaacatataatagcacagtggatatagacaaagaataaatcagtaagataaagaatctggtt-ggaaaatttttcc-c--aagtttaaataaaggcata-aaagatggaaaatatcta---agaac---taaaata----gaaag--taaaagcagaaaggtcaaTTTTGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176004861 457 + 178775436 AT------------------------------------GCTAGGTCTAAGCTTCCCTCTGTACTCCTAAAGGA-ATACTGCTAGCT-GAGGTGCTCCATAGACCTAGCGGAATTTGAGCtcataggaagag-------agaa-------aaaagtctATCTAAGGAGGAGTACTagccctttaaaagaaaaatagatac--tgAAGAATCTTATCAGAGAGAGCTGAATTAATGGCCCAGATAAAAcaagaatttgaaataaataagataaatatctTCAGCGAGCAGGAAAGGATATTGCAAATATGAAGCAGGAACAA----TCAGTGAAGACAAATAATCAAATAAGGATGGG-----AATAAAACATATAATAGCACAGTGGATATAGACAAACAATAAATCAGTAAGATAAAGAATCTGGTT-GGAAAATTTTTCC-C--AAGTTtaaataaaggcata-aaagatggaaaatatcta---agaac---taaaata----gaaag--taaaagcagaaagGTCAATTTTGAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132847940 453 + 135778131 AT------------------------------------GCTAGGTCTAAGCTTCCATCTGTACTCCTAAGGGA-ATACTGCTAGCT-GAGGTGCTCCATAGACCTAGCGGAATTTGAGCTTATAGGAAGAG-------AGAA-------AAAAGTCTATCTAAGGAGGAGTACTAGCCCTTTAAAAGAAAAATAGATAC--TGAGGAATCTTATCAGAGAAAGCTGAATTAATGGCCCAGATAAAACAAGAATTTGAAATAAATAAGATAAATATCTTCAGCAAGCAGGAAAGGATATTGCAAATATGAAGCAGGAACAA----TCAGTGAACAC----AATCAAATAAGGATGGG-----AATAAAACATATAATAGCACAGTGGATATAGACAAAGAATAAATCAGTAAGATAAAGAATCTGCTT-GGAAAATTTTCCC-C--AAGTTTAAATAAAGGCATA-AAAGATGGAAAATATCTA---AGAAC---TAAAATA----GAAAG--TAAAAGCAGAAAGGTCAATTTTGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188232062 455 - 190850796 AT------------------------------------GCTAGTTCTAAGCTTCCATCTCTACTCCTAAATGA-GTACTACTGGCT-GCTATAGTCCACAGTCCTAGCAGAACACGAGCTCACAGGAAGAG-------AAAA-------CAAAATGTATCTGAGAAGGGCTACTGGCCCCTTAAAAGAAAGATAGAAAC--CGAAGAATCTTATCAGAGAGAGCTGACTTAATGGCCCagataagacaagaatttgaaataaataagctaagtatcttcagagagca-gcgaggatactgcaaacatgaagcaggaataa----tcagtgaagacgaagaatggaatgaggatggg-----aataaaacatataatagcgaaatggatatagacaaagaataaatcagtgagataaagaatctggct-ggaagagtttcccgg--aagtttaaataaaggcata-aaagatggaaaatatcta---aaaac---taaag-a----gaaag--t-aaagtagaaaggtcaattttgat i calJac3.chr3 C 0 C 0 s mm10.chr8 84714586 446 - 129401213 atgactcaaaggtttgagaaccactgTTCTAGAGGGCAGCTCGGACTAAGCTTTCATACCCACTGCTATAACACGTCCTGTCAGCTCAAGGTAGCGAAGAGTTTTGATGGAGTTGCAACTTATAGGTAAAG-------ATAG-------GTTAATT--TCTAAGGAGGAGTAGGGGCCTCTTCAAA-----ACAGATACAGTGAAGAGCCTTATCAGAG-GGGCTGAATTCATGGTCCAT---------GAATTGTCTCTGATGAACACAAGCATCTTTAGG----AGGAGAGGAGATTGCGAAGATGAAGTGGTAGCAAGTCTTCTGCGAGGG---AGACTGGACTGGAGACAGG-----AATAAAGCGTGTCATTACAGAG---------------------------AGAGAAAGGAGCCGGTTAGGGAAAGTTCCCT-T--AAGGCACGAGTAAGGGATG-AAAGGGAGAAGCTATCGAGAGAGAGC---TACAATT--------------ATCGAGAAAGGTCAACTTTGAT i mm10.chr8 C 0 C 0 s canFam3.chr16 15724223 475 - 59632846 AT------------------------------------GCCAGGTTTAAAGTTTCATCCAGACTCCCA------CCAGTACCAGCT-AAGGTAACCAGTAGT-CTAAAAGAATTTGAGAACACAGGAAGAGTGCCCACAGAACAAGGGCAAAAAGATATCTGAGGAGGAGTACTAGCTCTTTAAGAGAAACATAGGTAC--TGAAGGACCTTATCAGAGGGAGTTGAATTAATGGCCCAGATAAAACAAGAATGTAAAGTCAGTAATATAAATATCTTCAGAGAGGAGGA---GATACTACAAACATGAAG----AACAA----TCTGTGAAGAAGAAGGATCAAATGGAGATAAGAAAAAAAAAAAACATATaatagcagaatggatatagctaaagaataaatcagtgagatcaaagatctggta-acagaatttttcc-tggaacattcaataagaggacagagagatggaaaatatcta---agaaaatgtaaaatatatagaaaggatagaaataaaaaggtcaacTTTAGT i canFam3.chr16 C 0 I 85 a score=3893900.000000 s hg38.chr4_KI270785v1_alt 45923 1287 + 119912 ttactacataaaactaaatagagtatag----------------------aattgttttcattgttgttgagat-ataattgagaattaaagaaagataga-aagtcagatcaaaatgg-ctccataaaacaacagaccacattgataagcaaaacctcaaatcttgacacattacacttaatttaaaata--acaaaggcaaaattctaaaagcatctgaataagaaataatatttcattgtaaatt-aagataattagcatcaaatttttgaatggca--acactagaatattaaagtgacatttga-------------------aaaatat-------tgaagaaaaataaacttagacctagagttttatatacagataaactattatttaaacactaggttgaataaaa----ggcatttcaagagacacatagaaggcgagggcacataaaatcttacagaaaacattctacagggagtacttctacagagaaaacaaataattccaaaaagaaagtttaaggtcaaccaaataagcaatggc-aa---aaaagaaatattgtgtgtgattatttgtatatgtgtataagagtgtcgtccaatgggcctttctgttttgatggagatattctatttgtactgttcaatatgatagaccatagccatgtgtggctgttg-gatgaaaagtatggctagtgtggccaaggaactgagttttaaattttatttaaccttaataaatttaaat---ttgaatagccatgtgtggttagtggctactacattgtacagcagagccctgtactaacacagatgaaatgttccagattataccaatatatgctgagggtcaggaacatgcagaaatcagaggatttggacagtatgttcaggttcttgtcttttacacagggaag----aaataat----aatga-gctctaaaaaattaagtctgaaatttaaggtattagcagaaaccaactgaa-g--atagacgttaaaatttggctttcaaaccagaagaaaaaa-----aattgctctcttcaataaaatgcaagaatgga---gaaaaaataaacaagaagaaaggttgatacatagaaaatatgcaataggatgacaagaataaatcatagtatgacagtaatttaagtaaatgtaaataggttaaacatgcacatcaaatcacagagactctcaggaaataagatgctgtaatacattgtctattagagatatttgaaacaaaag-----------aaaacagctagttg-----aaaataCATGAGAC--ATCCA------------TTTTTATTATCAATTTTAATAACAAAGAAATTATAA-----------------------------------------------GTTG------TTAAACTATGTAAGTAAAAGATATGAATACCATATATG s panTro4.chr4 190313001 1285 + 193495092 TTACTAGATAAAACTAAATA-----TAG----------------------AATTGTTTTCATTGTTGTTGAGAT-ATAATTGagaattaaagaaagataga-aagtcagatcaaaaggg-ctccataaaacaacagaccacattgataagcaaaacctcaaatcttgacacattacacttaatttaaaata--acaaaggcaaaattctaaaagcatctgaataagaaataatatttcattgtaaatt-aagataattagcatcaaatttttgaatggca--acactggaatattaaagtgacatttga-------------------aaaatat-------tgaagaaaaataaccttagacctagagttttatatacagataaactattatttaaacactaggttgaataaaataaaggcatttcaagagacacatagaaggcgaggacacataaaatcttacagaaaacattctacaggaagtacttctacagagaaaacaaataattccaaaaagaaagtttaaggtcaaccaaataagcaatggc-aa---aaaagaaatattgtgtgtgattatttgtatatgtgtataagagtgtcgtccaatgggcctttctgttttgatggagatattctatttgtactgttcaatatgatagaccttagccatgtgtgactgttaagatgaaaagtgtggctagtgtggccaaggaactgagttttaaattttatttgaccttaataaatttaaat---ttgaatagccatgtgtggctagtggctactacattgtacagcagagccctgtagtaacacagataaaatgttccagattataccaatatatgctgagggtcaggaacatgcagaaatcagaggatttggacagtatgttcaggttcttgtcttttacacagggaag----aaataat----aatga-gctctaaaaaattaagtctgaaatttaaggtattagcagaaaccaactgaaag--atagacattaaaatttggctttcaaaccagaagaaaaaa-----aattgctgtcatcaataaaatgcaagaatgga---gaaaaaataaacaagaagaaaggttgatacatagaaaatatgcaataggatgacaagaataaatcatagtatgacagtaatttaagtaaatgtaaatagcttaaacatgcacattaaatcacagagactctcaggagataagatgctgtaatacattgtctattagagatatttgaaacaaaag-----------aaAACAGCTAGTTG-----AAAATACATGAGAC--ATCCA------------TTTTTATTATCAATTTTAATAACAAAGAAAT---AA-----------------------------------------------GTTG------TTAAACTATGTAAGTAAAAGATATGAATACCATATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195279223 1293 + 198332218 TTACTAGATAAAACTAAATGGAGTATAG----------------------AATTGTTGTTGTTGTTGTTGAGAT-ATAATTGAGAATTAAAGAAAGATAGA-AAGTCAGATCAAAAGGG-CTCCATAAAGCAACAGACCACATTGATAAGCAAAACCTCAAATCTTGACACATTACACTTAATTTAAAATA--acaaaggcaaaattctaaaagcatctgaataagaaataacatttcactataaatt-aagataattagcatcaaatttttgaatggca--acactagaatattaaagtgacatttga-------------------aaaatat-------tgaaaaaaa--aatcttagacctagagttttatatacagatgaactattatttaaacagtaggttgaataaaataaaggcatttcaagagacacgtacaaggccAGGACACATAAAATCTTACAGAAAACATTCTACAGGGAGTACTTCTACAGAGAAAACAAATAATTCCAAAAAGAAAGTTTAAGGTCAACCAAATAAGCAATGGC-AA---AACAGAAATATTGTGTGTGATTATTTGTATATGTGTATAAGagtgtcgtccaatggtcctttctgttttgatggagatactctatttgtactgttcaatatgatagaccttagccatgtgtggctgttaagatgaaaagtgtggctagtgtggccaaggaactgagttttaaattttatttaaccttaataaatttaaat---ttgaatagccatatgtggttagtggctactacattgtgcagcAGAGCCCAGTAGTAATACAGATAAAATGTTCCAGATTATACCAATATATGTTGAGGGTAAGGAACATGCAGAAATCAGAGGATTTGGACAGTATGTTCAGGTTCTTGTCTTTTGCACAGGGAAGAAATAAATAAT----AATGA-GCTCTAAAAAATCAAGTATGTAATTTAAGATATTAGCAGAAACCAACTGAAAG--ATAGACAATAAAATTTGGCTTTCAAACCAGAAGAAAAAA-----AATTGATCTCATCAATAAAATGCAAGAAGGGA---GAAAAAAG----AAGAAGAAAGGTTGATACATAGAAAATATGCAATAGgatgacaagaataaatcataatatgacagtaatttaagtaaatgtaaataggttaaacgtgcacatcaaatcacagagactctcagGAAATCAGATGCCGTAATACATTGTCTATTAAAGATATTTGAAACAAAAG-----------AAAATAGCTAGTTA-----AAAATATATGACACTTATCCA------------TTTTTATTATCAATTTTAATAACAAAGAAATTATAA-----------------------------------------------GTTG------TTAAACTATGTAAGTAAAAGATATGAATACTATATATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111250254 1270 + 115148730 TTACTAGATAAAACTAAATAGAATATAG----------------------AATTGTTCTTGTTGTTGTAGAGAT-ATAATTGagaattaaagaaagataga-aagtcagatcaaaaagg-ttccataaagcaagagaccacattgataagcaaaacctcaaatcttgacacattacacttaatttaaaata--acaaaggcaaaatcctgaaagcatctgaataagaaataacatttcactgtaaatt-aagataattagcatcaaatttttgaatggca--acactagaatattaaagtgacatttga-------------------aaaatat-------tggagaaaaataaccttagacctagagttttatatacagataaattattatttaaacactaggttgaataaaataaaggcatttcaagagacacatacaaggccaggacacataaaatcttacagaaaacattctacagggggtacttcgacagagaaaacaaataattccaaaaagtaagtttaaggtcaaccaaataagcaatggc-aa---aaaagaaatattgtgtgtgattatttgtatatgtgtctaagagtgtcgtccaaagggcctttctgttttgatggagatattctatttgtactgttcaatatgatagaccttagccatgtgtggctgttaagatgaaaagtgtggctagtgtggccaaggaactgagttttaaattttatttaaccttactaaacttaaat---ttgaatagccatatgtggttagtggttactacattgtgcagcagagccctatagtaagacagataaaatgttccagattataccaatatatgatgagggtaaggaacatgcagaaatcagaggattttgacagtatgttcaggttcttgtcttttgcacagggaagaagtaaataat----aatga-gctctaaaaaattaagtatgaaacttaaggtattagcagaaaccaact----g--atagacattaaaatgtggctttcaaaccagaagaaaaaa-----aattgatctcatcaataaaatgcaagaagaga---gaaaaaataaacaagaagaaaggttgatacatagaaaatatgcaataggatgacaagaataaatcataatatgacagtaatttaagtaaatgtaaataggttaaacatgcacatcaaatcacagagactctcagGAAATAAGATGCTGTAATACATTTTCTATTAGAGATATTTGAAAT----G-----------AAAATAGCT--------------------------ATCCA------------TTTTTATTATCAATTTTAATAACAAAGAAATTATAA-----------------------------------------------GTTG------TTAAACTATGTTAGTAAAAGCTATGAatactatatatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181052656 1324 + 184069350 TTACTAGATAAAACTAAATAGAGTGTAG----------------------AATTGTTTTTATTGTTGTTGAGAT-ATAATTGagaattaaagaa----aga-aagtcagatcaaaaggg-----------caacagaccacattgataagcaaaacctcaaatcttgacacattccacttaattgaaaata--gcaaaggcaaaatcctaaaagcatctgaataagaaatcacatttcactgtaaatt-aagataattggcatcaaatttttgaatggca--acactagaatattaaagtgacatttga-------------------aaaatat-------tgaagaaaaataaccttagacctagagttttatataaagataaactgttatttaaacactaagttgaataaaattaaggcatttcaagagacacgtacaaggcaaggacacataaaatcttacagaaaacgttctacagggggtacttctccagagaaaacagataattccaAAAAGAAAGTTTAAGGTCAACCCAGTAAGCAGTGGC-AA---AAAAGAAATATTGTGTGTGATTATTCATATATGTGTATAAGagtgtcatccaatgggcctttctgttttgatggagatattctatttgtactgttcaatatgatagaccttagccatgtgtggctgttaagatgaaaagcgtggcgagtgtggctaaggaactgagttttaaattttatgtaaccttaatacatttaaat---ttgaatagccatatgtggttagtgactgctgcattgtgcaacAGAGCCctatagtaatacagataaaacgttccagattataccaatatctgttgagggtaaggaacatgcagaaattggaggattttgacagtatgctcaggttcttgtcttttgcacagggaag----aaataaa----aatga-gctctaaaaaattaagtgtgaaatttaagatattagcagaaaccaactgaaag--atagacattgaaatttggctttcaaaccagaagaaaaaa-----aattgatctcatcaataaaatgcaagaaagga---gaaaaagtaaccaagaagaaaggttgatacatagaaaatatacaataggatgatgagaatgaatcataatatgacagtaatttaagtaaatgtaaataggttaaacatgcacatcaaatcacagagactctcaggaaataagatgctataatacattgtctattagagatatttgaaacaaaag-----------aaAATAGCTAGTTA-----AAAATATATGAGAC--ATCCA------------TTTTTATTATCAATTTTAATAAC--AGAAATTATAAACTATATAAACAGAAATTATAAACTATATAAGTAAAAGATATGAATAGTTA------TTAAACTATATAAGTAAAAGATATGAATACTATACATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186390043 1275 + 189454096 TTACTAGATAAAACTAAATAGAGTGTAG----------------------AATTGTTTTTATTGTTGTTGAGAT-ATAATTGagaattaaagaa----aga-aagtcagatcaaaaggg-----------caacagaccacattgataagcaaaacctcaaatcttgacacattccacttaattgaaaata--gcaaaggcaaaatcctaaaagcatctgaataagaaatcacatttcactgtaaatt-aagataattggcatcaaatttttgaatggca--acactagaatattaaagtgacatttga-------------------aaaatat-------tgaagaaaaataaccttagacctagagttttatataaagataaactgttatttaaacactaagttgaataaaattaaggcatttcaagagacacgtacaaggcaaggacacataaaatcttacagaaaacgttctacagggggtacttctccagagaaaacagataattccaAAAAGAAAGTTTAAGGTCAACCCAGTAAGCAGTGGC-AA---AAAAGAAATATTGTGTGTGATTATTCATATATGTGTATAAGagtgtcgtccaatgggcctttctgttttgatggagatattctttttgtactgttcaatatgatagaccttagccatgtgtggctgttaagatgaaaagcgtggcgagtgtggctaaggaactgagttttaaattttatgtaaccttaatacatttaaat---ttgaatagccatatgtggttagtgactgctgcattgtgcaacAGAGCCctatagtaatacagataaaacgttccagattataccaatatctgttgagggtaaggaacatgcagaaattggaggattttgacagtatgctcaggttcttgtcttttgcacagggaag----aaataaa----aatga-gctctaaaaaattaagtgtgaaatttaagatattagcagaaaccaactgaaag--atagacattgaaatttggctttcaaaccagaagaaaaaa-----aattgatctcatcaataaaatgcaagaaagga---gaaaaagtaaccaagaagaaaggttgatacatagaaaatatacaataggatgatgagaatgaatcataatatgacagtaatttaagtaaatgtaaataggttaaacatgcacatcaaatcacagagactctcaggaaataagatgctataatacattgtctattagagatatttgaaacaaaag-----------aaAATAGCTAGTTA-----AAAATATATGAGAC--ATCCA------------TTTTTATTATCAATTTTAATAAC--AGAAATTAT-------------------------------------------------GTTA------TTAAACTATATAAGTAAAAGATATGAATACTATACATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176005318 1275 + 178775436 TTACTAGATAAAACTAAATAGAGTGtag----------------------aattgtttttattgttgttgagat-ataattgagaattaaagaa----aga-aagtcagATCAAAAGGG-----------CAACAGACCACATTGATAAGCAAAACCTCAAATCTTGACACATTCCACTTAATTGAAAATA--GCAAAGGCAAAATCCTAAAAGCATCTGAATAAGAAATCACATTTCACTGTAAATT-AAGATAATTGGCATCAAATTTTTGAATGGCA--ACACTAGAATATTAAAgtgacatttga-------------------aaaatat-------tgaagaaaaataacctTAGACCTAGAGTTTTATATAAAGATAAACTGTTATTTAAACACTAGGTTGAATAAAATTAAGGCATTTCAAGAGACACGTACAAGGCAAGGACACATAAAATCTTACAGAAAACGTTCTACAGGGGGTACTTCTCCAGAGAAAACAGATAATTCCAAAAAGAAAGTTTAAGGTCAACCCAATAAGCAGtggc-aa---aaaagaaatattgtgtGTGATTATTCATATATGTGTATGAGAGTGTCGTCCAATGGGTCTTTCTGTTTTGATGGAGATACTCTATTTGTACTGTTCAATATGATAGACCTTAGCCATGTGTGGCTGTTAAGATGAAAAGCGTGGCGAGTGTGGCCAAGgaactgagttttaaattttatgtaaccttaatacatttaaat---ttgaatAGCCATATGTGGTTAGTGACTGCTGCATTGTGCAACAGAGCCCTATAGTAATACAGATAAAACGTTCCAGATTATACCAATATCTGTTGAGGGTAAGGAACATGCAGAAATTGGAGGATTTTGACAGTATGCTCAGGTTCTTGTCTTTTGCacagggaag----aaataaa----aataa-gctctAAAAAATTAAGTGTGAAATTTAAGATATTAGCAGAAACCAACTGAAAG--ATAGACATTGAAATTTGGCTTtcaaaccagaagaaaaaa-----aattgatctcatcaataaaatgcaagaaagga---gaaaaagtaacCAAGAAGAAAGGTTGATACATAGAAAATATACAATAGGATGATGAGAATAAATCATAGTATGACAGTAGTTTAAGTAAATGTAAATAGGTTAAACATGCACATCAAATCACAGAGACTCTCAGGAAATAAGGTGCTATAATACATTGTCTATTAGAGatatttgaaacaaaag-----------aaaatagctagtta-----aaaatatatgagac--atcca------------tttttattatcaattttAATAAC--AGAAATTAT-------------------------------------------------GTTA------TTAAACTATATAAGTAAAAGATATGAATactatacatg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132848393 1279 + 135778131 TTACTAGATAAAACTAAATAGAGTGTAG----------------------AATTGTTTTTATTGTTGTTGAGAT-ATAATTGagaattaaagaa----aga-aagtcagatcaaaaggg-----------caacggaccacattgataagcaaaacctcatatcttgacacattccacttaattgaaaata--gcaaaggcaaaatcctaaaagcatctgaataagaaatcacatttcactgtaaatt-aagataattggcatcaaatttttgaatggca--acactagaatattaaagtgacatttgc-------------------aaaatat-------tgaagaaaaataaccttagacctagagttttatataaagatgaactattatttaaacactacgttgaataaaattaaggcatttcaagagacacatacaaggcaaggacacataaaatcttacagaaaacgttctacagggggtacttctccagagaaaacagataattccaAAAAGAAAGTTTAAGGTCAACCTAATAAGCAGTGGC-AA---AAAAGAAATATTGTGTGTGATTATTCATATATGTGTATAAGagtgtcatccaataggcctttctgtttcgatggagatattgtatttgtactgttcaatatgatagaccttagccatgtgtggctgttaagatgaaaagcatggctagtgtggccaaggaactgagttttaaattttatgtaaccttaatacatttaaat---ttgaatagccatatgtggttagtgattgctgcattgtgcaacAGAGCCctatagtaacacagataaagcgttccagattataccaatatctgttgagggtaaggaacatgcagaaatcggaggattttgacagtatgctcaggttcttgtcttttgcacagggaag----aaataaataataatga-gctctaaaaaattaagtatgaaatttaagatattagcagaaaccaactgaaag--atagacattgaaatttggctttcaaaccagaagaaaaaa-----aattgatctcatcaataaaatgcaataaggga---gaaaaagtaaccaagaagaaaggttgatacatagaaaatatgcaataggatgatgagaataaatcataatatgacagtaatttaagtaaatgtaaataggttaaacatgcacatcaaaccacagagactctcaggaaataagatgctgtaatacattgtctattagagatatttgaaacaaaag-----------aaAATAGCTAGTTA-----AAAATATATGAGAC--ATCCA------------TTTTTTAAATCAATTTTAATAACAAAGAAATTATAA-----------------------------------------------GTTG------TTAAAC----TAAGTAAAAGatatgaatactatacatg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188232517 1279 - 190850796 ttactagatgaagctaaatagagtatag----------------------aattatttttgttgttgatgcaat-gtaattgagaaggaaagat----aga-aagtcagatcaaaaggg-ccccataaagca-------gcattgatgaggaaaacctcaactcttgacacattgcacgtaattcaaaatg--gcaaaggcaacattctcaaagcatctgaataagaaatagcatttcaccgtaaatt-aagataattggcatcaaattttggaagggca--acactgggatattgaagtgacatttaa-------------------aaaatat-------tggagaaaaataaccttaaacctagagttttatatacagatacgctattatttaagcactagcttgaataaaataaaggcatttcaagatacatgtacaaggcaaggacacataaaatcttacagaaaacattctgcagggggtacttctacagagaaaacaaataattccaaaaagaaactttaaggtcaaccaaataagcagtggcaaa---aaaagaaaTGCTTTGTGTGATTATTTGTGTATGTGTATAAGagggttctccaatgggcctttctcttttgatggagatattctatttgtaccgttcaatatggtagaccttagccatgtgtggctcttaagatggaaaatgtggctagtgtggccaaggagctgagttttaaattttatttaaacttaataaatttaaat---ttggatagccatatgtggttactggctacgacattctacagcAGAACCCTATAGTAATACAGATAAGATGTTCCAGATTATACCAATCTACGTTGAGGACAAGGAACATGCAGAAATCAGAGGATTTTCGCAGTAGGCTTAGGTTCTTGTCTTATGCACAGGGAAG----AAATAAATAA-TATGA-GC-CTTAAAAATTAAGTATGAGATTTAAGATATTAGCAGAAACCAACTGAAAG--ATAGACATTAAAAATTGTCTTTCAaatcagaagaaaaaa-----a---gatctaatcaataaaatgcaagaaggga---gaaaaa-----caagaagaaaggctgacacatagaaaatatgcaacaggatgacaagaataaattataatatgacagtagtttaagtgaatgtaaatagattaaacatgtacatcaaatcacagagactctcaggaagtaagatgctagcacacattgtctactagagatatttaaaacaaaag-----------aaaatagctagtta-----aaaataTATGAGACTTGTCAA------------TTTTTATTCTCAGTTTTAATAACAAAGAAGTTATAA-----------------------------------------------GTTG------TTAAACTGTATCAGTAGAAGACATGAGTACTATATATG i calJac3.chr3 C 0 C 0 s mm10.chr8 84715032 1250 - 129401213 CTACTA----AAGCTAAATGAAGTAGAGTTTCTTTTTCCTTTCTTTTTTCGGTTGTTGTTATTGTTGTTGGAATAATGGTTGAGTCTGAAAGAGAGGTGGACGAGTCAGATCAAAAGAGCCCCCAAAGAACCCCAGACTAAACTGATAAGGAAAATCCCAGATCTTGACATGTTACATTTGATTTCAAAGACTTCCAAGACAAAATCCTAAAGACATCC-CGTCAAAAACATCATTTCATTATAAATTAAAAATAATTGCTACCAGGTTTCTCAATGGGAACACACTAGAGTGTTACAGCaatattttaatattattaaaatgtttttaaaatatttttaaatGAAGGGATATCACCCCAGATACAGAATGTTATTCAAAGATACACT------------CGAGGTAGAATGAAACAAAGGTGATCCAAA-----------------------CTAGAGTTC------AAAAGCTTTACAGGAAATGCGTC--------AAACAGCTGATCCACATCAGAA--TCTAATGT-ATACAGATGAATAATAGC-AGCGTGAAGGAA------TGTGAAATGAAGCTGGTGCGC-TACAACAATGCTTTGCAGCAGAATTCCTTTGCTTAGTGGAAATAAGACGTTTGTGCCTTCTAGTATGATAGA-------AGTGTACAGGTATTCAGAATAAAA----------------TAAGGACCAGGATTTTGCATTTTTTG-----------AACTTAAATGTCTTTAATAGCCTGATGTGGTT-GTAACTG---------------------TGTAACATTCCAGATATAATTTTATAGAACATATCAAC-TATGTAAGAGGCAGGGAAGGGGCAGAGGTCA-AGATTTTTGACACCATGCTAAAATCTTTGTATTAATCAACGG--------AAATAAA----CCTGGTGCTCCATAGCA--AAGGGAAGGACTTAAATCATTGGCCGGAATAAACTGAGAGAAATTGACATCGAGTTTCAGTTTGCAAGGAAAAAACAATAATGACTAAATGATCTGAATAACAGAAAACAAGAAGAGATTTAAAACAATAAGCAAGAAGAATGGTT----TGGAGGAAATATTAAAGAGAATATCAGGGATAAAT-----TATGACAGTAATTAAAGTAAGTTTAAATTGACTAAACATGCACAGCAAATCACAGAGACTC-AGGGAAATAAG--------ATACGTTGTCTACTAGAA--ATTTACAACAAAAAGAAGTACAGCTAAAACAGCTAGCTATTCATAAAATACATAATAC--ATAAAAGCACCATCAGTTTTCCATTGTCTATTTTAATAGC--TGAAAACACAA-----------------------------------------------GGTAAACTGTTAAAACTATGATAGTAAAAGTTACAAATATTACATATG i mm10.chr8 C 0 I 735 e canFam3.chr16 15724698 85 - 59632846 I a score=59087.000000 s hg38.chr4_KI270785v1_alt 47210 22 + 119912 T--GTATATATACACATACATATg s panTro4.chr4 190314286 22 + 193495092 T--GTATATATACACATACATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195280516 22 + 198332218 T--GTATATATACACATACCTATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111251524 22 + 115148730 t--gtatatatacacatacatatG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181053980 22 + 184069350 T--GTATATATACACATACATAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391318 22 + 189454096 T--GTATATATACACATACAAAGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176006593 22 + 178775436 t--gtatatatacacatacatatg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132849672 22 + 135778131 t--gtatatatacatatacatatG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188233796 24 - 190850796 CAGGTATATATACCCATACATATA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15724698 85 - 59632846 I e mm10.chr8 84716282 735 - 129401213 I a score=639392.000000 s hg38.chr4_KI270785v1_alt 47232 297 + 119912 aagaa--aggagatgctgggcgcagtggctcatgcctgtaatcccaacactttgggagaacaagatgggcagatcacgaggtcaggagatggagaacatcctggctaacacagtgaaaccccatctctactaaaaaatacaaag--ttagccaggcgtggtagcgggcgcctgtagtcccagctactcaggaggttgaggcaggagaatggcgtgaacccaggaggcggagcttgcagagatagcgccactgca----ctccagcctgggcaacagagcaagactccgtctc----------aa-aacaaacaaac-------------- s panTro4.chr4 190314308 299 + 193495092 AAGAA--AGGAGATgctgggcgcagtggctcgtgcctgtaatcccagcactttgggagaacaagatgggcggatcacgaggtcaggagatggagaccatcctggctaacacagtgaaaccccatctctactaaaaaatacaaaaaattagccaggcgtggtggcgggcgcctgtagtccccgctactcaggaggttgaggcaggagaatggcgtgaacccaggaggcagagcttgcagagatagcgccactgca----ctccagcctgggcgacagagcaagactccgtctc----------aa-aacaaacaaac-------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195280538 317 + 198332218 AAGAAAGAGGAGATgctgggcgcagtggctcatgcctgcaatcccagcactttggaaggccaagatgggcggatcacgaggtcaggaggtggagaccatcctggctaacacagtgaaaccccatctctactaaaaaatacaaaaaattagccgggcgtggtggtgggcgcctgtagtcccagctactggggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagagatagcaccactgca----ctccagcctgggcgacagagcaagactccgtctc--------aaaa-aacaaacaaaccccaaaacaacaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111251546 321 + 115148730 AAGAAAGAGGAGATgctgggcacagtggctcatgcctgtaatcccagcattttgggaggccaagatgggcagatcacgaggtcaggagatggagaccatcctggctaacacagtgaaaccccatctctactaaaaaatacaaaaaattagcccgacgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggaaggagaatggcatgaacccgggaggcagagcttgcagagatagtgccactgca----ctccagcctgggcgacagagcaagactctgtctcaaaaaaaaaaaa-aaaaaaaaaacccaaaaacaa---- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054002 297 + 184069350 AAGAAAGAGGAGATgctgggtgtggtggctcacgcctgtaatcccagcactttgagaggccacggtgggcagatcacgaggtcaggagatcgagactatcctggctaacacggtgaaaccctgtctctactaaaaaatacaaaaaatgatccggacatggtagc-ggcgcctgtagttccagctactcaggaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagagagagtgtcactgcactccctccagcctgggcgacagagagagactttgtctc----------aa--------aaac-------------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391340 297 + 189454096 AAGAAAGAGGAGATgctgggtgtggtggctcacgcctgtaatcccagcactttgagagaccacggtgggcagatcacgaggtcaggatatggagactatcctggctaacacggtgaaaccctgtctctactaaaaaatacaaaaaattatccggacatggtggc-ggcgcctgtagttccagctactcaggaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagagagagtgtcactgcactccctccagcctgggcgacagagagagactttgtctc----------aa--------aaac-------------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176006615 305 + 178775436 aagaaagaggagatgctgggtgtggtggctcacgcctgtaatcccagcactttgagaggccacggtgggcagatcacgaggtcaggatatggagactatcctggctaacatggtgaaaccctgtctctactaaaaaatgcaaaaaattatccggacatggtggc-ggcgcctgtagttccagctactcaggaggctgaggcaggagaatggcgggaacccaggaggcggagcttgcagagagagTGTCACTGtactccctccagcctgggcgatagagagagactttgtctc----------aaaaacaaacaaac-------------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132849694 302 + 135778131 AAGAAAGAGGAGCTgctgggtgtggtggctcacgcctgtaatcccagcactttgagaggccatggtgggcagatcacgaggtcaggatatggagactatcctggctaacatggtgaaatcctgtctctactaaaaaatacaaaaaattatccgggcatggtggcgggcgcctgtagttccagctactcaggaggctgaggcaggagaatggcgggaacccgggaggtggagcttgcagagacagtgtcactgccctccctccagcctgggcgacagagagagactttgtctc----------aa----aaacaaac-------------- i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15724698 85 - 59632846 I e mm10.chr8 84716282 735 - 129401213 I e calJac3.chr3 188233820 0 - 190850796 C a score=32739.000000 s hg38.chr4_KI270785v1_alt 47529 18 + 119912 aaacaaacgaac-----aaaaac s panTro4.chr4 190314607 18 + 193495092 aaacaaacaaac-----aaaaac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195280855 23 + 198332218 aaacaaacaaacaaaaaaaaaac i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111251867 18 + 115148730 caaaaaacaaaa-----aaaaac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054299 19 + 184069350 aaacaaacaaac----aaaaaac i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391637 19 + 189454096 aaacaaacaaac----aaaaaac i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176006920 19 + 178775436 aaacaaacaaac----aaaaaac i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132849996 19 + 135778131 aaacaaacaaac----aaaaaac i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15724783 17 - 59632846 AAATAAAGTATC-----AGAAA- i canFam3.chr16 I 85 C 0 e mm10.chr8 84716282 735 - 129401213 I e calJac3.chr3 188233820 0 - 190850796 C a score=778904.000000 s hg38.chr4_KI270785v1_alt 47547 247 + 119912 aagaaagaggaaataaaaaagaaaa------tgaaATGTATACATCCACCTCTATGATGAAGACAGATACATTCTGAGAAAAAGGTGCATAAATCAACAATTGCAGTTGGAGTTTTGGACACACTTTCAAGAAGAA--AAACTGATCCAAAAGACAAAAAATAAAAAGCGGAAGGATTTAGACGGTTTGAAAAAAACTCTCTGATTGATAAGCTCAAACCCATAAATGCATATAGATTTTCACACTCCAAAACCT- s panTro4.chr4 190314625 247 + 193495092 aagaaagaggaaataaaaaagaaaa------TGAAATGTATACATCCACCTCTATGATGAAGACAGATACATTCTgagaaaaaggtgcataaatcaacaattgcagttggagttttgggcacactttcaagaagaa--aaactgatccaaaagacaaaaaataaaaagaggaaggatttagacgatttgaaaaaaactctctgatcgataagctcaaacccataaatgtatatagattttcacactccaaaacct- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195280878 246 + 198332218 aaggaagaggaaataaaaaagaaaa------tgaaaTGTATACATCCACCTCTATGATGAAGACAGATACATTCTGAGAAAATGGTGCATTAATCAACAATTGCAGTTGGAGTTTTGGACACACTTTCAAGAAGAC--AAACTGATCCAAAAGACAAAAAATAAAAAGAGGAAGGATTTAGACGATTTG-AAAAAACTCTCTGATTGATCAGCTCAAACCCATAAATGCAAATAGATTTTTACACTCCAAAACCT- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111251885 247 + 115148730 aagaaagaggaaatgaaaaagaaaa------tgaaaTGTATACATCCACTTCTATAATGAAGACAGATACATTCTgagaaaaaggtgcataaatcaacaattgcagttggagttttggacacactttcaagaagac--aaactgatccaaaagacaaaaaataaaaagaggaaggatttagacgatttgaaaaaaactttctgattgataagctcaaacccataaatgcatatagatttttatactccaaaacct- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054318 251 + 184069350 aagaaagaggaaat---aaagaaaaTGATC-TGAAATGTGTACATCCACCTGTATGATGAAgacagataaattataagaaaaaggtacataaatcaacaattgcagttggaattttggacacactttcaagaagacaaaaactgacccaaaagacaaaaaataaaaggaggaaggatttagaagagttgaaaaaaactctctgattgataatctcaaacccataaatgcatatagatttttacactctgaaacct- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391656 251 + 189454096 aagaaAGAGGAAAT---AAAGAAAATGATC-TGAAATGTGTACATCCACCTGTATGATGAAGACAGATAAATTATAAGAAAAAGGTACATAAATCAACAATTGCAGTTGGAATTTTGGACACACTTTCAAGAAGACAAAAACTGACCCAAAAGACAAAAAATAAAAGGAGGAAGGATTTAGAAGAGTTGAAAAAAACTCTCTGATTGATAATCTCAAACCCATAAATGCATATAGATTTTTACACTCTGAAACCT- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176006939 251 + 178775436 aagaaagaggaaat---aaagaaaatgatc-tGAAATGTGTACATCCACCTGTATGATGAAGACAGATAAATTATGAGAAAAAGGTACATAAATCAACAATTGCAGTTGAAATTTTGGACACACTTTCAAGaagacaaaaactgacccaaaagacaaaaaataaaaggaggaaggatttagaagagttgaaaaaaaCTCTCTGATTGATAATCTCaaacccataaatacatatagatTTTTACACTCTGAAACCT- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850015 254 + 135778131 aagaaagaggaaataaaaaagaaaaTGATC-TGAAATGTATATATCCACCTGTATGATGAAGACAGATAAATTGTGAGAAAAAGGTACATAAATCAACAATTGCAGTTGGAGTTTTGGGCACACTTTCAAGAAGACAAAAACTGACCCAAAAGACAAAAAATAAAAGGAGGAAGGATTTAGAAGAGTTGGAAAAAACTCTCTGATTGATAATCTCAAACCCATAAATGCATATAGATTTTTACACTCTGAAACCT- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188233820 243 - 190850796 AAGAAAGAGGAGAT-----AGAAAATGATC-TGAAATATGTACCTCCACCTGTATGATGAAGAAAGATCaattatgagaaaaaggtacataaatcaacaattgcaattcgagttttggacacactttcaagaagac--aaaccgatccaaaagacaaaaaattaa--gaggaatgatctagaagatttgaataaaac--tctgattgagaagctcaaacgaatcaatgcatatagaattttacactccaaaacat- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15724800 247 - 59632846 AAGAAATAGTAGATCAAAAATAAAGTGACAGAAAAATATACACATGTACGCATATTATGAAGAAAGATACATTATGAGggaaaaatagctaaataaacaattggagttggta------acacacttttgagaagac--aagctgatcaagaagacaaaaaattaaaagagaaaagatttagaagaactg-gaaaaactctgtgattgataaacctacaccaacagatgtacatagaattttgtacttcaaaaccat i canFam3.chr16 C 0 C 0 e mm10.chr8 84716282 735 - 129401213 I a score=276904.000000 s hg38.chr4_KI270785v1_alt 47794 81 + 119912 AGAATACAC-------CTGCACA--TA-GTAAATATTTA----TAAAGCCTCAAATTTTATGAAATCAAAAGCATAAAACATCAGAGATCAATAA s panTro4.chr4 190314872 81 + 193495092 agaatacac-------ttgcaca--ta-gtaaatattta----taaagcctcaaattttatgaaatcaaaagcaTAAAACATCAGAGATCAATAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281124 81 + 198332218 AGAATACAC-------CTGCACA--TA-GTAAATATTTA----TAAAGTCTCAAATTTTATGAAATCAAAAGCATAAAACATCAGAGATCAGTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252132 81 + 115148730 agaatacac-------ctgcaca--ta-gtaaatattta----taaaGTCTCAAATTTTCTGAAATCAAAAGCATAAAACATCAGAGATCAATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054569 85 + 184069350 agaatacac-------ctgcaca--ta-gtaaatatttaTAAGTAAAGTCTCAAATTCTATGTAATCAAAAGCATAAAACATCAGAGATCAATAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391907 85 + 189454096 AGAATACAC-------CTGCACA--TA-GTAAATATTTATAAGTAAAGTCTCAAATTCTATGTAATCAAAAGCATAAAACATCAGAGATCAATAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176007190 85 + 178775436 AGAATACAC-------ctgcaca--ta-gtaaatatttataagtaaAGTCTCAAATTCTATGTAATCAAAAGCATAAAACATCAGagatcaataa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850269 84 + 135778131 AGAATACAC-------CTGCACA--TA-GTAAATA-TTATAAGTAAAGTCTCAAATTCTATGAAATCAAAAGCATAAAACATCAGAGATCAATAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188234063 82 - 190850796 agaatatac-------ttgcaca--ta-gtaagtatttatcaaT--AGTCTCAAATTTTATAACACCCAAGGCATAAAACATCAGAGATCAATA- i calJac3.chr3 C 0 I 312 s mm10.chr8 84717017 79 - 129401213 aaaataccc-------tctcacatgta-ataaaaat-------CAAAATAAAAAATTCTATAGAATCAAAATCAT-AAACATTAAAATTCATTAA i mm10.chr8 I 735 C 0 s canFam3.chr16 15725047 91 - 59632846 agaatgtacattcttgctgcatg--cacataaatatttaTAAATGAAGTCTCAAACTCTGTACAATCAAAACCATAAA--CTTAGGGATCAATAA i canFam3.chr16 C 0 C 0 a score=884319.000000 s hg38.chr4_KI270785v1_alt 47875 241 + 119912 ACAAAAAGATACTTTTAAAGGATCTGCAGGTGACCTTGAATAACACAGGGATCAATGTatgatcaaagtatatcatgaacaacagaatggctaaaaattggagaacttagataaaattgatgaatttctggagttatatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggtaatcaaagacttctccc--ctaaaacagctt s panTro4.chr4 190314953 240 + 193495092 -CAAAAAGATACTTTTAAAGAATCTGCAGGTGACCTTGAATAACACAGGGATCAATGTatgatcaaagtatatcatgaacaacagaatggctaaaaattggagaacttagataaaattgatgaatttctggagttatatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggtaatcaaagacttctccc--ctaaaacagctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281205 237 + 198332218 -CAAAAACATGCTTTTAAAGAATCTGCAGGTGGCCTTGAATAACACAGGGATCAATGTatgataaaagtatatcatgaacaacagaatggttaaaaattggagaac---gataaaattgatgaatttctggagttatatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaactaattaaaaggtaatcaaagacttctccc--ctaaaacagctt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252213 239 + 115148730 -CAAAAAGATACTTTTAAAGAATCTGCAGGTGACCTTGAataacacagggatcaatgtgtgat-aaaatatgtcatgaacaacagaatgggtaaaaattggagaacttagataaaattgatgaatttctggagttatatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggtaatcaaagacttctccc--ctaaaacagctt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054654 240 + 184069350 -CAAAAAGATACTTTTAAAGAATCTGCAGGTGACCTTGAATAACACAGGGACCAATGTatgataaaagtatttcatgaacaacagaatggctaaacattggaaaacttagataaaattgatgaatttctggagttttatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggcaatcaaatacttctccc--ctaaaacagctc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186391992 240 + 189454096 -CAAAAAGATACTTTTAAAGAATCTGCAGATGACCTTGAATAACACAGGGACCAATGTatgataaaagtatttcatgaacaacagaatggctaaacattggaaaacttagataaaattgatgaatttctggagttttatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggcgatcaaatacttctccc--ctaaaacagctc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176007275 240 + 178775436 -caaaaagatacttTTGAAGAATCTGCAGGTGACCTTGAATAACACAGGGACCAATGTATGATAAAAGTATTTCATGAACAACAGAATGGCTAAAAATTGGAAAACTTAGATGAAATTGATGAATTTCTGGAGTTTTATATAATACCAAAATTGTTACAGGATTAAGCAAAAACCTTGAATGAgacaatcatcagggaaataattAAAAGGCAATCAAATACTTCTCCC--CTAAAACAGCTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850353 240 + 135778131 -CAAAAAGATACTTTTAAAGAATCTGCAGGTGACCTTGAATAACACAGGGATCAATGTatgataaaagtatttcatgaacaacagaatggctaaaaattggaaaacttagataaaattaatgaatttctggagttttatataataccaaaattgttacaggattaagcaaaaaccttgaatgagacaatcatcagggaaataattaaaaggcaatcaaatactcctccc--ctaaaacagctc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188234457 241 - 190850796 ACAAAAAGATACTTTTACAGAATCTGCAAGTGACCTTGAATAACACGGACATCGATGCatgataaaagtatatcatgaacaagagaagggctaaacactggagaacttagaggaaactgatggatttctggagttatatgtaataccaaaatggttacaggattaaacaaaaaccttgaatgagacaatcatcagggaaagaattttaagataattaaagacttctccc--ccaaaacagctc i calJac3.chr3 I 312 C 0 s mm10.chr8 84717096 228 - 129401213 -CAAAAGGATAATTTTGAAGTACCAAAAGAGAGTCTTGCATAATA--GTGATCCAAATATGTTAATAGCATATTGTGA--AAAAGAATCGGCTGAAATTTGAAAATGTGGACAAAAAAGATTAATTTCTGAAA------AATACATTAAAATTACTGAAAGATTAAATATAAATTTAAAATGAGATAAATATCTGGGAA--AAGTAAAATGTAATCAAAACCTCTCTTC--CCAAAAGAACTT i mm10.chr8 C 0 I 116 s canFam3.chr16 15725138 238 - 59632846 -CCAAAAGATAACTTTAAAATGCATTCAGACAACCTTATGTAAtatagatatcaaagtatgacaaaaatagatcatgaacaacagaatggctaaaaatttgaaaactatgatgaaatagatgaa-ttctcaagttttatataaaatcaagac--ttaaaaaaataaataaaaa-cttgcataagacaattatcagggaagaaattaaaatgtaatcaaataactctctccaccaaaagagttc i canFam3.chr16 C 0 C 0 a score=695830.000000 s hg38.chr4_KI270785v1_alt 48116 222 + 119912 caacacca-------------------------------------------------------------------------------------------------------gatggttttaaat---------------------gtgagttctacctaactttagaggaacagataatcttgatcttatacaagagaactcttccaaaTGCAATTAAATCTAATAATGTG-TGAAAATTCGTAATAA-CGAATATATTTTTTCC---AAGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCATACTCATTGGGAAAGCTGTAATT-ACTTAGTTT s panTro4.chr4 190315193 220 + 193495092 caacacca-------------------------------------------------------------------------------------------------------gatggttttaaat---------------------gtgagttctacctaactttagaggaacagatactcttgatcttatacaagagaactcttccaaaTGCAATTAAATCTAAT---GTG-TGAAGATTCGTAATAA-CGAATATATTTTTTCC---AAGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCATACTCATTGGGAAAGCTGTAATTTACTTAGCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281442 221 + 198332218 caacaccg-------------------------------------------------------------------------------------------------------gatggtttttaat---------------------atgagttctacctaactttagaggaacagataatcttaatcttatacaagagaactcttccaaaTGCAATTAAATCTAATAATGTG-TGAAAATTCATAATAA-TGAATATATTTTTCCC---AAGGA----ATATAATGGTATTTTAA-------TAAC--AT-ATTCTATTAAAGT--------------AACTATCATACTCATTGTAAAAGCTGTAATTTACTTAGTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252452 223 + 115148730 caacacca-------------------------------------------------------------------------------------------------------gatggttttaaat---------------------gtgagttctatctaactttggaggaacagataatctcgatcttatacaagagaactcttccaaaTGCAATTAAATCTAATAATGTG-TGAAAATTCATAATAA-TGAATATATTTTTCCC---AAAGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCATACTCATTGGAAAAGCTGtaatttacttagttt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181054894 223 + 184069350 caacacca-------------------------------------------------------------------------------------------------------gatgcttttaaat---------------------gtgagttctacctaatgttagaggaaaggataatctcgatcttatacaagagaactcttccaaaTGCAATTAAATATAATAATGTG-TGAAAATTCATAGTAATTAAATATATTTTTCCC---AAGGAAAATAAATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAACT--------------AACAATCATACTCATTGGAAAAGCTGTAATTTAC-----TT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186392232 219 + 189454096 caacacca-------------------------------------------------------------------------------------------------------gatgcttttaaat---------------------gtgagttctacctaatgttagaggaaaggataatctcgatcttatacaagagaactcttccaaaTGCAATTAAATATAATAATGTG-TGAAAATTCATAGTAATTAAATATATTTTTCCC---AAGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAACT--------------AACAATCATACTCATTGGAAAAGCTGTAATTTAC-----TT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176007515 219 + 178775436 CAACACCA-------------------------------------------------------------------------------------------------------GATGCTTTTAAAT---------------------GTGAGTTCTACCTAATGTTAGAGGAAAGGATAATCTCGATCTTATACAAGAGAACTCTTCCAAAtgcaattaaatataataatgtg-tGAAAATTCAtagtaattaaatatatttttccc---aaGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCATACTCATTGGAAAAGCTGTAATTTAC-----TT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850593 219 + 135778131 caacacca-------------------------------------------------------------------------------------------------------gatgcttttaaat---------------------gtgagttctacctaacgttagaggaaaggataatctcgatcttatacaagagaactcttccaaaTGCAATTAAATATAATAATGTG-TGAAAATTCATAGTAATTAAATATATTTTTCCC---AAGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCATACTCATTGGAAAAGCTGTAATTTAC-----TT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188234698 219 - 190850796 caacacca-------------------------------------------------------------------------------------------------------gatggtcttaagt---------------------atgcgttccacctaactttagaggaacagatcatcttgatcttatacaagagaactcttccaaaTGCAATTAAATCTAATAATGTG-TGAAAATTTATAGTAATTGAATATATTTTCCCC---AAGGA----ATATAATGGTATTTTAA-------TAACAGAT-ATTCTATTAAAGT--------------AACAATCACACTCATTGGAAAAGCTGTAGTTTAC-----TT i calJac3.chr3 C 0 C 0 s mm10.chr8 84717440 332 - 129401213 ccACACCACAGATGACTGTATTTATTTCTCCTGGCctgtggtttgaacccaggccctcctgtgttctaagcaagttctctacctctggccacacttctagtcTTGTCAGTTAATAGCTTGAGAT---------------------GTGA--TTTGTCCAAAGTTTCATAAACAGATAAATTCTATC-TGTGTAAGAATAATCTTCCAAGTTTAATTAAGTCTAATAATGTC-TCGAAACATTTAGTACTCAAAGGTATGTCTTCCCTTAAATA----ATTCAATGATGTTTTAACGTTAGCTATCAGAT-ATCCTATTTGAGA--------------AATGATCA-ACTGATGAGAAAAGCTACAGTT-ATGTATCTT i mm10.chr8 I 116 I 538 s canFam3.chr16 15725376 254 - 59632846 caagacca-------------------------------------------------------------------------------------------------------agtagtttGAAATTCTAAATAGTTTGCATTCTAAGTAAAAGTTAAGTAACTCTCAAGGAACAGAT---CTCTATCTTACACAACAAAAAGCTTCTAAGCTCAATTAAA-CTAAAAACATATTAAAAATTCACAATAAATGAATATATTTTTTCCC--AAAGA----ATATAA---TATTTCAA-------TTATAAGTGATTCTATTAAAGTaaataaccttcagcaatgatcatacctaccagaaaagctttagtt-gtatagcct i canFam3.chr16 C 0 C 0 a score=413354.000000 s hg38.chr4_KI270785v1_alt 48338 140 + 119912 AGTTTAGTTTACTTATGGGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCCATTAAGGCCTTGGAATCATCAATCCACATAATTAAAATGGAAAAGTTGTGTCATGAGGCACGACAGATACTAC-AAATTCACTCAc s panTro4.chr4 190315413 140 + 193495092 AGTTTAGTTTACTTATGGGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCCATTAAGGCCTTGGAATCATCAATCCACATAATTAAAATGGAAAAGTTGTGTCATGAGGCACGACAGATACTAC-AAATTCACTCAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281663 140 + 198332218 AGTTTAGTTTACTTATGGGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCCATTAAGGCCTTGGAATCTTCAATCCACATAATTAAAATGGAAAAATTGTGTCACGAGGCATGACAGATACTAT-AAATTCACTCAc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252675 140 + 115148730 agtttagtttacttATGGGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCCATTAAGGCCTTGGAATCGTCAATCCACATAATTAAAATGGAAAAGTTGTGTCACGAGGCACAACAGATACTAT-AAATTCACTCAc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181055117 140 + 184069350 AGTTTAGTTTACTTATGAGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCTATTAAGACCTTGGAATCATCAATCCACATAATTAAAATGGAAAAGTTGTGTCATGAGGCACAACAGATACTAt-gaattcactcac i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186392451 140 + 189454096 AGTTTAGTTTACTTATGAGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCTATTAAGACCTTGGAATCATCAATCCACATAATTAAAATGGAAAAGTTGTGTCATGAGGCACGACAGATACTAt-gaattcactcac i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176007734 140 + 178775436 CGTTTAGTTTACTTATGAGCCaagtaaataacaacaaaaa-tctggCCACATCTCTATTAAGACCTTGGAATCATCAATCCACgtaattaaaatggaaaagttgTGTCATGAGGCACGACAGATACTAT-GAATTCACTCAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850812 140 + 135778131 AGTTTAGTTTACTTATGGGCCAAGTAAATAACAACAAAAA-TCTGGCCACATCTCTATTAAGACCTTGGAATCATCAATCCACATAATTAAAATGGAAAAGTTGTGTCATGAGGCACGACAGATACTAt-gaattcactcac i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188234917 136 - 190850796 AGTT--GTTTACTTATGGGCCAAGTAAATAACAACAAAAACTCTGGCCACATTTCCACTAAATCT----GGCCATCAATCCACATGATTAAAAAGACAAAGTTTTGTTACGAGGCGTGACAGATACCATAAAATTCACTCAC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15725630 0 - 59632846 C e mm10.chr8 84717772 538 - 129401213 I a score=528620.000000 s hg38.chr4_KI270785v1_alt 48478 153 + 119912 tt-aaaaatgggaaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtatttgttaatgcaagatagtaagaaaa--aaataagatgcctaaggatcagaagggtcacaaaaacagtcttatttatttacatgtaa s panTro4.chr4 190315553 153 + 193495092 TT-AAAAATGggaaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtatttgttaatgcaagatagtaagaaaa--aaataagatgcataaggatcagaagggtcgcaaaaacagtcttatttatttacaggtag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281803 153 + 198332218 tt-aaaaatgggaaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtattcgttaatgcaagatagtgaggaaa--aaataagatgcataaggatcagaagggtctcaaaaacagtcttatttatttacaggtaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252815 153 + 115148730 tt-aagaatgggaaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtatttgttaacgcaagatagtaagaaaa--aaataagatgcataaggatcagaagggtcgcaaaaacagtcttatttatttacaggtaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181055257 153 + 184069350 tt-aaagatggggaaagg-aaagaaagatgtaccctattactaccaatgcttaacattacattggaggtatttgttaatgcaagacagcaagaaaa--aaataagatgcataaggatcagaagggttgcaaaaacagtcttatttatttacaggtaa i rheMac3.chr5 C 0 I 120 s macFas5.chr5 186392591 153 + 189454096 tt-aaagatggggaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtatttgttaatgcaagacagcaagaaaa--aaataagatgcataaggatcagaagggttgcaaaaacagtcttatttatttacaggtaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176007874 153 + 178775436 TT-AAagatggggaaagg-aaagaaagatgtaCCCTATTACTACAAATGCTTAACATAACATTGGAGGTATTTGTTAATGcaagacagcaagaaaa--aaataagatgcaTAAGGATCAGAAGGGTTGCAAAAACAGTCTTATTTATTTACAGGTAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132850952 153 + 135778131 tt-aaagatggggaaagg-aaagaaagatgtaccctattactacaaatgcttaacataacattggaggtatttgttaatgcaagacagcaagaaaa--aaataagatgcataaggatcagaaaggttgcaaaaacagtcttatttatttacaggtaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188235053 154 - 190850796 TTAAAAAATGGAAAAaggaaaaaaaagatgtaccctattcctataaatctttaacataacattggaggtatttgctaaagcaagatagtatg-aaa--aaataagatgcataaggatcagaagggttgcaaaaacagtcttatttatttacaggtaa i calJac3.chr3 C 0 C 0 s canFam3.chr16 15725630 153 - 59632846 tt-aaaaatggaaaaaggaaaaaaaatatttctcctattattgtggatttttaacat---attggaggtgttaggtaatgcaaggaaataagaaaaacaaataacatgtataagagacagaaggaatgcaacgacaatctcatttatttgcagatga i canFam3.chr16 C 0 C 0 e mm10.chr8 84717772 538 - 129401213 I a score=99627.000000 s hg38.chr4_KI270785v1_alt 48631 34 + 119912 taggaccctctaaatagaaaaccAAGTAAAATCA s panTro4.chr4 190315706 34 + 193495092 taggaccctctaaatagaaaaccaagtaaagtca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281956 34 + 198332218 taggaccctctaaatagaaaaccaagcaaaatca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111252968 34 + 115148730 taggactctctaaatagaaaaccaagcaaaatca i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186392744 34 + 189454096 tatgaccctctaaatagaaaaccaagcaaaatca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176008027 34 + 178775436 TATGACCCTCTAAATAGAAAACCaagcaaaatca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132851105 34 + 135778131 tgtgaccctctaaatagaaaaccaagcaaaatca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188235207 34 - 190850796 taggaccttctaaatagaaaaccaagcaaaatca i calJac3.chr3 C 0 C 0 s canFam3.chr16 15725783 34 - 59632846 taggagtctctaactagaaaaccaagcaaaagca i canFam3.chr16 C 0 C 0 e mm10.chr8 84717772 538 - 129401213 I e rheMac3.chr5 181055410 120 + 184069350 I a score=221542.000000 s hg38.chr4_KI270785v1_alt 48665 104 + 119912 AAAGA-AAATTTAGTA---ATGATAAAACTGAGGAAAGTTGTT-TAATACAGGACAGACATCTAAAATCAATA------CCATTG------GT--TTATTA---TATTTT--------------------------------------------CAAAGTTGAAAatata s panTro4.chr4 190315740 104 + 193495092 aaaga-aaatttagta---atgataaaactgaggaaagttgtt-taatacaggacagacatctaaaatcaata------atattG------GT--TTATTA---TATTTT--------------------------------------------CAAAGTTCaaaatata i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195281990 104 + 198332218 aaaga-aaatttagta---atgataaaacttaggaaagttgtt-taatacaggatagacatctaaaatcaatA------ACATTG------GT--TTATTA---TATTTT--------------------------------------------CAAAGTTGaaaatata i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111253002 104 + 115148730 aaaga-aaatttagtg---atgataaaactgaggaaagttgtt-taatacaggatagacatctaaaatcaatA------ACATTG------GT--TTATTA---TATTTT--------------------------------------------CAGAGttgaaaatata i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186392778 104 + 189454096 aaaga-aaatttagtc---atgataaaactgaggaaagttgtt-taatacaggatagacatctaaaatcaGTA------ACATTG------GT--TTAtta---tatttt--------------------------------------------caaagttgaaaataca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176008061 104 + 178775436 aaaga-aaatttagtc---ATGATAAAACTGAGGAAAGTTGTT-TAATACAGGATAGACATCTAAAATCAGTA------ACATtg------gt--ttatta---tatttt--------------------------------------------caaagttgaaaataca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132851139 104 + 135778131 aaaga-aaatttagtc---atgataaaactgaggaaagttgtt-taatacaggatagacatctaaaatcaGTA------ACATTG------GT--TTAtta---tatttt--------------------------------------------caaagttgaaaataca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188235241 111 - 190850796 aaagagaaatttagta------ataaaactgagcaaagttgtt-taatacaggatagacatctaaaatcattc------acactgttaaatgt--acatcaaaccattgt--------------------------------------------taaatttgaaaatata i calJac3.chr3 C 0 C 0 s mm10.chr8 84718310 76 - 129401213 CAACA-AAGCTTTGTATTTGTGAGAAAACTAAATGCAGCTGTT-TAATGCCAGAAGGGTATCTGAAATCAATA------GCTTT-------------------------------------------------------------------------------------- i mm10.chr8 I 538 C 0 s canFam3.chr16 15725817 157 - 59632846 atagagaagtttagaa---gtgataatat--agcaaaactgTTACAACACAGGATAGAAATTGAACACCGataaaaaatacattt------attattatta--ttatttttaatttttatttatttatgatagtcacacacacacacacacacacagaggcagagacata i canFam3.chr16 C 0 I 125 e rheMac3.chr5 181055410 120 + 184069350 I a score=35415.000000 s hg38.chr4_KI270785v1_alt 48769 34 + 119912 a---tttatattttatataaatatata------------ATTGTGAATA------ s panTro4.chr4 190315844 34 + 193495092 a---tttatattttatataaatatata------------attGTGAATA------ i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195282094 41 + 198332218 atattttatattttatataaatatata--------gtttattatgaata------ i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111253106 43 + 115148730 atattttatattttatataaatatata------atatttattatgaata------ i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186392882 43 + 189454096 gtattttatattttatataaatatata------atatttGTTATGAATA------ i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176008165 43 + 178775436 gtattttatattttatataaatatata------ttatttgttatgAATA------ i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132851243 43 + 135778131 gtattttatattttatataaatatata------atatttGTTATGAATA------ i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188235352 8 - 190850796 a-------------atataat---------------------------------- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15726099 52 - 59632846 ---atttattatttaaaaaaaaaaaaaCACAGGATAGACATCTCGAATTAGCAGC i canFam3.chr16 I 125 C 0 e mm10.chr8 84718386 0 - 129401213 C e rheMac3.chr5 181055410 120 + 184069350 I a score=4272948.000000 s hg38.chr4_KI270785v1_alt 48803 1206 + 119912 ATGTCTTAATTTTCAACTTTGAAAATATAAT-AAAAATAAGACATTATTCTTAGTGACAACATTTCTAAAATTTCTCAGG----AATTA-TTGTAACAAATAATCCAATCATTCCTACAATTTAGAGATTGGAAAAGGGACTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAACTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATTCTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTTAGAGTACAGCCCAAGTTTAACTTTCATAATAACACCTAATTAG-TGCCAAATCGCACAGATAAtgtggtaggcagcctctgaaatggtttcccactg--aaccctcctcgct----gtatttactacttcccgaaatcctctccttttgaccatgggctgg-----------------acctagtgcctaatgcatagaatatgacaaaggggataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tccatct------tgctgtcattctctcttac------------ccacttgctagcttccttggt-----ggcaattcaacggccatgctatgagctgtgctgtggagagacccacatggcaaggaaatgaaggaggc------cagtagccagtgggcaactgaatcctg----caaccatgtaagtgagtttgaaaat--atcttcccc------aagtcaagtcttcagaggagactgcagcccctgctgac--accttgattatagccttggcagagg---ctttaggc--agacactc---agctaagccacgatctggattcctgactcacggagataat------------gcttactcttttgagcttctaac-ttttgatgtaatttgttatatagcaatagataactaatataGGCAAGTATCTGAAATAAAGTAGACAACTAGCTAAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCAAGTAAATAACGACAAATACAAGCCAAAAATCTGGCCACATTTCCATTAAGACCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTTGTGTCATGAGGCATGACAGATACTTCAGATTCACTCACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTGTACATGGTT-----CTGGAAAGCAAATGCTTGAAtttccagtctgcctttcagcta s panTro4.chr4 190315878 1205 + 193495092 ATGTCTTAATTTTCAACTTTGAAAATATAAT-AAAAATAAGACATTATTCATAGTGACAACATTTCTAAAATTTCTCAGG----AATTA-TTGTAAGAAATAATCCAATCATTCCTACAATTTAGAGATTGGAAAAGAGACTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTTAGAGTACAGCCCAAGTTTAACTTTCATA-TAACACCTAACTGG-TGCCAAATCGCACAGACAAtgtggtaggcagcctctgaaatggtttcccactg--aaccctcctcgct----gtatttacaacttcccgaaatcctctccttttgaccatgggctgg-----------------acctagtgcctaatgcatagaatatgacaaaggggataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tccatct------tgctgtcattctctcttac------------ccacttgctagcttccttggt-----ggcaagtcaacggccatgctatgagctgtgctgtggagagacccacatggcaaggaaatgaaggaggc------cagtagccagtgggcaactgaatcctg----caaccatgtaagtgagtttgaaaac--atcttcccc------aagtcaagtcttcagaggagactgcagcccctgctgac--accttgattatagccttggcagagg---ctttaggc--agacactc---agctaagccatgatctggattcctgactcatggagataat------------gcttactcttttgagcttctaac-ttttgatgtaatttgttatatagcaatagataactaatataGGCAAGTATCTGAAATAAAGTAGACAACTAGCTAAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCAAGTAAATAACAACAAATACAAGCCAAAAATCTGGCCACATTTCCATTAAGACCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTTGTGTCAGGAGGCACGACAGGTACTTTAGATTCACTCACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTGCACATGGTT-----CTGGAAAGCAAATGCTTGAAtttccagtctgcctttcagcta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195282135 1214 + 198332218 atgtcttaattttcaactttgaaaatataat-aaaaataaGACATTATTCATAGTAACAACATTTCTAAAATTTCTCAGG----AATTA-TTGTAACAAATAATCCAATCATTCCTATAATTTAGAGATTGGAAAAGGGACTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAAAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACGAATTTTCAACAATAATACTAGATTTTTCTCTGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTTAGAGTACAGCCCAAGTTTAACTTTCATAATAACACCTGATTGA-TGCCAAATTACACAGATAATGTG-----------ctgaaatggtttcccactg--aaccctcctcgct----gtatttacaacttcccgaaatcctctccttttgaccatgggctggacctagtgcctgtctgaacctagtgcctaatgcatacaatatgacaaaggggataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagcttgtgctt------------------------------------tccatct------tgcggtctttctctcttac------------ccacttgctagcttccttggt-----agcaagtcaactgccatgctatgagctgtgctgtggagagacccacatggcaaggaaatgaaggaggc------cagtagccagtgggcaactgaatcctg----caaccatgtaagtgagtttgaaaacagatcttcccc------aagtcaagtcttcagaggagactgcagcccctgctgac--accttgattatagccttggcagagg---cctgaggc--aggcagtc---agctaagccacgatctggattcctgactcacagagataat------------gcttactcttttaagcttctaac-ttttgatgtaatttgttatatagcaatagataactaatataGGCAAGTATCTAAAATAAAGTAGACAACTAGCTAAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCAAGTAAATAACAACAAATAGAAGCCAAAAATCCGGCCACATTTCCATTAAGGCCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTTGTGTCATGAGGCACGACAGATACTTTAGATTCACTCACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTgcacatggtt-----ctggaaagcaaatgcttgaatttccagtctgccttacagcta i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111253149 1225 + 115148730 atgtcttaattttcaactttgaaaatataat-aAAAATAAGACATTATTCATAGTAACAACATTTCTAAAATTTCTCAGG----AATTA-TTGTAACAAACAATCCAATCATTCCTACAATTTAGAGATTGGAAAAGGGACTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAGAATTATATTAGCAAAATTTAACTGAGCTTAGAATTTAC-CATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACGTATGAGTTACTTAGAGTGCGGCCCAAGTTTAACTTTCATAATAACACCTAATTGA-TGCCAAATTACACAGATAAtgtggtagccaacctctgacatggtttcccactg--aaccctccttgct----gtatttacaacttcccgaaatcctctccttttgaccatgggctggacctagtgcctgtctgaacctagtgcctaatgcatagaatatgacaaaggggataagatgtcatttctaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tccatct------tgctgtcattctctcttac------------ccacttgctagcttccttggt-----ggcaagtcaactgccatgctatgagctgtgctgcggagagacccacatggcaaggaaatgaaggaggc------cagtagccagtgggcagctgaatcctg----caaccacgtaagtgagtttgagaacagatcttcccc------aagtcaggtattcagaggagactgcagcccctgctgac--accttgattatagccttggaggagg---cttgaggc--ggacactc---agctaagccacgatctggattcctgactcacggagataat------------gcttactcttttaagcttctaac-ttttgatgtaatttgttatatagcaatagataactaatataGGCAAGTATCTAAAATAAAGTAGACAACTAGCTAAAGAGGAATGTTGGTGATTACATGCCACAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGCCCAAGTAAATAACAACAAAAACAAGGCAAAAATCTGGCCACATTTCCATTAAGGCCTTGGCATCATCAA-TTCACATAATCAAAATGGAAAAA--GTTGTGTCATGAGGCACGACAGATACTTTAGATTCACTCACTTAAAGCTCATTTTAGCTCAT---TCATCCTTGTTTTCCTGCACATGGTT-----CTGGAAGGCAAATGCTTGAAtttccagcctgccttacagcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181055530 1219 + 184069350 ATGTCTTAATTTTCAACTTTGAAAATATAAT-AAAAATAAGACATTATTCGTAGT---AACATTTCTAGAATTTCTCAGG----AATTA-TTGTAACAAATAATCCAATCATTCCTACAGTTTAGAGATTGGAAAAGGGGCTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTATTCAGAGTAGAGCCCAAGTTTAACTTTCA---TAACACCTAATTGA-TGCCAAATTACACAGAGAAtatggtgggcaacctctaaaatggtttcccactg--aaccctcctcgct----gtattcacaacttcccgaaatcctctccttttgaccacgggctggacctaatgtctgtctgaacctagtgcctaatgcatagaatatgacaaaggtgataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tctatct------tgctaactttctctcttac------------ccacttgctagcttctttggt-----ggcaagtcaaccaccatgctatgagctgtgctgtggagagacgcacatggcaaggagaggaaggaggc------ctgtagccagtgggctactgagtcctg----caaccatgtgagtgagtttgaaaacagatctccccg------aagttaaatcttcagaggagactgcagcccctgctgac--accttgattatagccttggcagagg---cttgaggc--agacactc---agctaagccacgatctggattcctaactcatggagataat------------gcttactcttttaagcttctaac-ttttgatgtaatttgttatatagcaataaataactaatataGGCAAGTATCTAAAATAAAATAGACAATTAGCTGAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCTAGTAAATAACAACAAAAACAAGCCAAAAATCTGGCCACATTTCCATTAAGGCCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTCGTGTCATGAGGCACGACAGATACTTTAGATTCACACACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTGCACATGGTT-----CTGGAAAGCAAATGCTTGAAtttccagtctgccttgcagcta i rheMac3.chr5 I 120 C 0 s macFas5.chr5 186392925 1219 + 189454096 ATGTCTTAATTTTCAACTTTGAAAATATAAT-AAAAATAAGACATTATTCGTAGT---AACATTTCTAAAATTTCTCAGG----AATTA-TTGTAACAAATAATCCAATCATTCCTACAGTTTAGAGATTGGAAAAGGGGCTAGGGTAAATCTAGTTAGTAGA-TTTTCAAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTATTCAGAGTAGAGCCCAAGTTTAACTTTCA---TAACACCTAATTGA-TGCCAAATTACACAGAGAAtatggtgggcaacctctaaaatggtttcccactg--aaccctcctcgct----gtattcacaacttcccaaaatcctctccttttgaccacgggctggacctaatgtctgtctgaacctagtgcctaatgcatagaatatgacaaaggtgataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tctatct------tgctaactttctctcttac------------ccacttgctagcttctttggt-----ggcaagtcaaccaccatgctatgagctgtgctgtggagagacgcacatggcaaggagaggaaggaggc------cagtagccagtgggctactgagtcctg----caaccatgtgagtgagtttgaaaacagatctccccg------aagttaaatcttcagaggagactgcagcccctgctgac--accttgattatagccttggcagagg---cttgaggc--agacactc---agctaagccacgatctggattcctgactcatggagataat------------gcttactcttttaagcttctaac-ttttgatgtaatttgttatatagcaataaataactaatataGGCAAGTATCTAAAATAAAATAGACAATTAGCTGAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCTAGTAAATAACAACAAAAACAAGCCAAAAATCTGGCCACATTTCCATTAAGGCCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTCGTGTCATGAGGCACGACAGATACTTTAGATTCACACACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTgcacatggtt-----ctggaaagcaaatgcttgaatttccagtctgccttgcagcta i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176008208 1220 + 178775436 ATGTCTTAATTTTcaactttgaaaatataat-aaaaataagacattattCGTagt---aacatttctgaaatttctcAGG----AATTA-TTGTCACAAATAATCCAATCATTCCTACAGTTTAGAGATTGGAAAAGGGGCTAGGGTAAATCTAGTTAgtagatttttcaaagaattattttAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTCAGAGTAGAGCCCAAGTTTAACTTTCA---TAACACCTAATTGA-TGCCAAATTACACAGAGAATATGGTAGGCAACCTCTAAAATGGTTTCCCACTG--AACCCTCCTCGCT----GTATTCACAACTGCCCGAAATCCTCTCCTTTTGACCACGGGCTGGACCTAATGTCTGTCTGAACCTAGTGCCTAATGCATAGAATATGACAAAGGTGATAAGATGTCATTTCCAA-------GATGAGGTTACAAA-------------------------------------GAGTTTGTGCTT------------------------------------TCTATCT------CGCTGACTTTCTCTCTTAC------------CCACTTGCTAGCTTCTTTGGT-----GGCCAGTCAGCCACCATGCTATGAGCTGTGCTGTGGAGAGACCCACATggcaaggagaggaaggaggc------caGTAGCCAGTGGGCTACTGAGTCCTG----CAACCATGTAAGTGAGTTTGAAAACAGATCTCCCCG------AAGTTAAATCTTCAGAGGAGACTGCAgcccctgctgac--accttgattatAGCCTTGGCAGAGG---CTTGAGGC--AGATACTC---AGCTGAGCCACGATCTGGATTCCTGACTCATGGAGATAAT------------GCTTACTCTTTTAAGCTTCTAAC-TTTTGATGTAATTTGTTATAtagcaataaataactaatataggcaagtatctaaaataaaatagacaattaGCTGAAGAGGAATGTTGGTGATTATGTGCCTCAAAATGAGAACTATGATTAACGTA----GCTTACTTATGGGCCtagtaaataacaacaaaaacaagccaaaaatcTGGCCACATTTCCATTAAGGCCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTCATGTCATGAGGCACAACAGATACTTTAGATTCACTCACTTAAAACTCATTTTAGCTCAT---TCATCCTTGTTTTCCTGCACATGGTT-----CTGGAAAGCAAATGCTTGAATTTCCAGTCTGCCTTGCAGCTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132851286 1215 + 135778131 ATGTCTTAAGTTTCAACTTTGAAAATATAAT-AAAAATAAGACATTATTCATAGT---AACATTTCTAAAATTTCTCAGG----AATTA-TTGTAACAAATAATCCAATCATTCCTACAGTTTAGAGATTGGAAAAGGGACTAGGGTAAATCTAGTTAGTAGATTTTTCAAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAC-AATAATATTTTCC--TAAACCAATTTTCAACAATAATACTAGATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTCAGAGTAGAGCCCAAGTTTAACTTTCA---TAACACCTAATTGA-TGTCAAATTACACAGAGAAtatggtaggcaacctctaaaatggtttcccactg--aaccctcctcgct----gtattcacaacttcccgaaatcctctccttttgaccatgggctggacctaatgtctgtctgaacctagtgcctaatgcatagaatatgacaaaggtgataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------tccatct------tgctgactttctctcttac------------ccacttgctagcttccttggt-----ggcaagtcaaccaccatgctatgagctgtgctgtggagagacccacatggcaaggaaaggaaggaggc------cagtagccagtgggctactgagtcctg----caaccat----gtgagtttgaaaacagatctccccg------aagttaaatcttcagaggagactgcagcccctgctgac--accttgattacagccttggcagagg---cttgaggc--agacactc---agctaagccacgatctggattcctgactcatggggataat------------gcttactcttttaggcttctaac-ttttgatgtaatttgttatatagcaatagataactaatataGGCAAGTATCTAAAATAAAATAGACAACTAGCTGAAGAGGAATGTTGGTGACTATGTGCCTCAAAATGAGAA-TATGATTAACGTA----GCTTACTTATGGGCCTAGTAAATAACAACAAAAACAAGCCAAAAATCTGGCCACATTTCCCTTAAGGCCTTGGCATCATCAA-TCCACATAATCAAAATGGAAAAA--GTCGCGTCATGAGGCATGACAGATACTTTAGATTCACTCACTTAAAACTCATTTTAGCTCAT---TCATGCTTGTTTTCCTGCACATGGTT-----CTGGAAAGCAAATGCTTGAATTTCCAGTCCGCCTTGCAGCTA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188235360 1190 - 190850796 -----------------------------at-aaaaataag--attattcatagt---aacatTTCTAAAATTTCTCAAG----AATTA-TTATAACAAATAATTCAAT-ATTCCTACAGTTTAGAGATTAGGAAAAGAACTAGGATCAATGTAGTTAGTTGA-TTTTCGAAGAATTATTTTAGCAAAATTTAACTGAGCTTAGAATTTAA-AATGATATTTTCT--TAAACCAATTTTCAACTATAATACTACATTTTTCTCAGTGTATCCAAGTTATAGTCAGTTAACATATGAGTTACTCAGAGTAGAGCCCAA-TTTAAGTTTGATGATGACACCTGATTGA-TGCCAAATTACACAGATAAtgtggtaggcgacctctaaaatggcttcccactg--aaccctgcccact----gtatttacaacttcctgaaatcctctccctttgaacatgggctggacgtagtgcctgtctgaacctagtgcctaatgcatagactatgacaaaggagataagatgtcatttccaa-------gatgaggttacaaa-------------------------------------gagtttgtgctt------------------------------------cccatct------tgctctctttctctctttc------------ccacttgctagcttccttggt-----ggcaagtcaactgccatgctatgagctgtgctgtggagaggcccacatggcaaggaaatgaaggaggc------cagtagccagtgtgcagctgagtcttg----caaccatgtaagtgagtttgaaaacagatcttcccc-------agttgagtcttcagatgagactgcagcccttgctgac--accttgcatatagccttggcagagg---cttgaagcagagacattc---agctaagccacaacctggattcctgactgtcagagataat------------gtttcctcttttaagcttctaac-ttttgatgtaatttgttatgtagcaaaagataacaaataTGGGCAATTACCTAAAGTAAAGTAGACGACTAGCTAAAGGGGAATGTTGGCGATTATGTGCCTCAAAATAAGAACTATGATTAATGTA----GTTTACTTATGGGCCAAGTAAATAACAACGAAAACAAACAGAAAACCTGGCTACATTTCCATTAAGGCCTTGGAGTCATCAA-TCCGCATAATCAAAATGGAAAAA--GCTGTGTCATGAGAAATGGCAGCTACTGTAGATTCACTCACTGAAAACTTGTTTAAGCTTAT---TCATTCTTGTTTTCCTgtacgtggtt-----ctagaaagcaaacacttgaatttccagtctgccttgcagcta i calJac3.chr3 C 0 C 0 s mm10.chr8 84718386 1265 - 129401213 -----TTAAATGACAAACTTGAACATGGAGTGAAAAATAAAGCATTGTTTACAGTAACAACATTTCTAAAATTGCCCATGAGATAGCTA-TAGTGACAAAGAGCCCAGTCACCTCTACAGTTTTTAGACTGAAGGCAGGACCAGGACAAATCTAGTTAGTAGC-TTTGCAAAGAATTATTTAAATAAAATGTGGCTAAGTTTAGGATTAATAAAAAATATCCTTCTGTAGGCCAGTT---GAGTCTAATTCCAAATTGTTCTTAGTATACATCAGTTATAACTAGTTAGCAAATTGACTACTCAGAGTAGCCCCATAGTATAACTTCTATAATAACACTGAACTGT-GGTCACATTGTATCGACACTTTTGCAAGTTACCACta-----gttccctataggtgctctttcctgct----atgcacactaaat----gaattctctcctactga----gggcaggttcaatcttct------acctgttttctcttgtgcagaattttgcaaaagtgataggatattatctctgagtcatgggatgaggctgtgcgtgcgtaggtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaggtccatctctcttctgctcccccctcctattacttttgtttctgtcccttcttttcctttcttcttcccaagggaacccagctggcctgctatgggctgtactgtggagagggctacatgcccaggcagtgaa----gc------caccagcctgtgagagtctgaatcctgacaacagttgtggaagcgattttatgaccacatcctccct-------ggtggaccctttggataagactgaaccccc------------------atggccC------------CTTTAAGC--AAACACCTCCAACTTCTGCCACT-TCAGGCTTTCCAAAACACAGAGATAAT------------GTTGACCCTTTGAAGCCTCTAGCTTTTTAATGTGTTTCGTTGTGTAGCAA-AGAGAGCTGAGA-------------GAATTAAAGTAAACCATTAGCCAGAGAAGGATGTT---GACTCTCTGCCTCAAAGTGAGAACCAGGGTTGTCTTA----GCTTGTTTGTGGCCCCAAT-ACCAACAATAACAATAATCAAAACATCTG----TATTCACATT------TGGGGATCACTGGCTTCACCTGCTCAAAATAAAAAAATGATTTTGTCACGTACCATGGTAGCAAGTATATAATGGTTCACTTCAAACT------GGCACATCTCTATTCCTTGTCTTATTGCCTGTGCCTTGGAGCTGCAAAGCAAATGTTTGAATTCACAGACTTtgtcttagtta i mm10.chr8 C 0 I 1240 s canFam3.chr16 15726151 1220 - 59632846 atttttaaatatcaaaatatgaaaatataat-aaaaataaa--attattCACAGTAACAACATTTCTAAAAGTATTCAGG----AGTTAGCAGAAATAAAGAACTCAATCTTTTCTATAGTTTCGGAATTGGAGCAAGGAACAGAGTGATTCTAGTTAGTAGC-TTTTCAAAGAATTATTTAAGCAAAGTTTAACTGAGCTTAGAATTCAA-GAAAATATTTTCT--TAAATCCATTTCCAGCGAGAATACCAGATTCTTCTCAGTTCATCCAAGTCATAATCAGGTAATATATGAGTT----AGAGTAGTGCCCAAGGAGAAGTGTCATA-AAACACCCAATTGATTGCCAAGTTCTATAGGCAATAGggtaggcagcctctaaaatggctctccaagg--aaccctgcctcctagtaataatcagggcttcacgtaattctctcatgttgggtgtggactggacctagtgcctgtct----------tctaacacacagaatatgacaaaggttatgggatatca-ccccaa-------gaggagtttacaaa-------------------------------------gaaactctggtt------------------------------------ttcatct------tgcttcccttctctctctt------------gctcttgctgtcttcctgtga-----gaggaaccaggtgttatgctttgagcagcactaaggaaaggcccaagtggcaaggaaccaaaggaggcctttggcaacaaccagagagaagcagaatcctgccagcagtcatgtgagtgagcctgaaagccagtcctcccccaagttgagttgagcctttcggcaggactgcgggcattgctggcagacggtggccgttgccttgtgagggagatcttgggga--agagagtc---agctgagccac-acctggattcctgattcacagaaactatgagctaatataggtttgctgttttgagctgctaac--tttggtgtagtttgctatgtagcaatagatagggaacGCAGACAATTATCTATAATAA-----ATAATTAGCTAAAGA---------------ATGTGATTCAAAAGGAGAACTATGATTTACTTACTTGGTGTCCTTATGGGCTGGATAAATAACAACAAGAACAAACCAAAACTGTAGTCACATTTCCATTAAGGCCTTGGAATCATTGGGCCTACATGGT--------ACAAA--ACTGTGTCACGAGACATGGCAGATGCAGCAGATTGACTCATTTAACACTCATTTGAAGGCCA---TCATATCTTGTCTCTTGCACCAGGGC-----GCTGAAGGCAAATA-GTGAAGGTCCAGCTTTCCTTCCAGCTT i canFam3.chr16 C 0 C 0 a score=1082004.000000 s hg38.chr4_KI270785v1_alt 50009 343 + 119912 actgtgatcatggacacaggtctggattagaaaatgaaagcagaagttcccaaggagagtttca-ttttcatatt-aaaa-atgaattctccagaaaaggcattttactttcaccccctgcacattctt-----------------------------------------------tctgcttgcaatgtgaaagtgatatttagaaatgcaggacatcttgcagtcatgagcacagaggggaaag-ctgtctgctaagaatggcaccatgggaagctgggagcatcctgcgctcctggtggcattg-tgCGGTGACGGACTAGTCTACACTC-TTGTTAGTGT-----------------------------------TGGGGATTTCTGCTATT--CACAGCTGA--GTATTTCCTAACTGAAACCAGTAGAA s panTro4.chr4 190317083 343 + 193495092 actgtgatcagggacacaggtctggattagaaaatgaaagcagaagttcccaaggagagtttca-ttttcatatt-aaaa-atgaattctccagaaaaggcattttactttcaccccctgcacattctt-----------------------------------------------tctgcttgcaatgtgaaagtgatgtttagaaatgcaggacatcttgcagccatgagcacggaggggaaag-ctgtctgctaagaatggcgccatgggaagctgggagcatcctgcgctcctggtggcGTTG-TGCGGTGAAGGACTAGTCTACACTC-TTGTTAGTGT-----------------------------------TGGGGGTTTCTGCTATT--CACAGCTGA--GTATTTCCTAACTGAAACCAGTAGAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195283349 345 + 198332218 actgtgatcatggacacaggtctggattagaaaatgaaggcagaagttcccaaggagagtttca-ttttcatatt-aaaa-atgaattctgcagaaaaggtattttactttcaccctctgcacattgtt-----------------------------------------------tctgcttgcaatgtggaagtgatgtttagaaatgcaggacatcttgcagccatgagtacagaggggaaag-ctgtccgctaagaatggcaccatgggaagctgggagcatcctgggctcctggtggcattg-tgCGGTGAAGGACTAGTCTACACTC-TTGTTAGTGT-----------------------------------TGGGGGTTTCTGCTATTGCGACAGCTTA--GTATTTCCTAACTGAAACCAGTAGAA i ponAbe2.chr4 C 0 I 7993 s nomLeu3.chr7b 111254374 343 + 115148730 actgtgatcatggacacaagtctggattagaaaatgaaggcagtagttcccaaggagagtttca-ttttcatatt-aaaa-gtgaattctccagaaaagccattttacttttaccccctgcacattctt-----------------------------------------------tctgcttgcaatgtgaaagtgatatttagaaatgcaggacatcttgcagccatgagcacagaagggaaag-ctatctgctaagaatggcaccatgggaagctgggagcatcctgggctcctggtggcattg-tgCGGTGAAGGACTAGTCTACACTC-TTGTTAGTGT-----------------------------------TGGGGGTTTCTGCTATT--CACAGCTGA--GTATTTCCTAACTGAAACCAGTAGAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181056749 343 + 184069350 actgtgatcatggacacaggtctggattagaaaatgaaggcagaagttcccaaggagagtttca-ttttcgtatt-aaaa-atgaattctccagaaaaggcattttactttcacctcctgcacattctt-----------------------------------------------tctgcttgcaatgtgaaagcgatgtttagaaatgcaggacatcttgcagccatgagcacagaggggaaag-ctatctgctaaaaatggcaccatgggaagctgagagcatcctgggctcctggtggcattg-tgcagTGAAGGACTAGGCTACACTC-GTGTTAGTGT-----------------------------------TGGGGGTTTCTGCTATT--CACAACTGA--GCATTTCCTAACTGAAACCAGTAGAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186394144 343 + 189454096 actgtgatcatggacacaggtctggattagaaaatgaaggcagaagttcccaaggagagtttca-ttttcgtatt-aaaa-atgaattctccagaaaaggcattttactttcacctcctgcacattctt-----------------------------------------------tctgcttgcaatgtgaaagcgatgtttagaaatgcaggacatcttgcagccatgagcacagtggggaaag-ctatctgctaaaaatggcaccatgggaagctgagagcatcctaggctcctggtggcattg-tgcagTGAAGGACTAGGCTACACTC-GTGTTAGTGT-----------------------------------TAGGGGTTTCTGCTATT--CACAACTGA--GCATTTCCTAACTGGAACCAGTAGAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176009428 343 + 178775436 ACTGTGATCATGGACACAGGTCTGGAttagaaaatgaaggcagaagttcCCAAGGAGAGTTTCA-TTTTCGTATT-AAAA-ATGAATTCTCCAGAAAAGGCATTTTACTTTCACCTCCTGCACATTCTT-----------------------------------------------TCTGCTTGCAATGTGAAAGCGATGTTTAGAAATGCAGGACATCTTGCAGCCATGAGCACAGAGGGGAAAG-CTATCTGCTAAAAATGGCACCATGGGAAGCTGAGAGCATCCTGGGCTCCTGGTGGCATTG-TGCAGTGAAGGACTAGGCTACACTC-GTGTTAGTGT-----------------------------------TAGGGTTTTCTGCTATT--CACAACTGA--GCATTTCCTAACTGAAACCAGTAGAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132852501 390 + 135778131 ACTGTGATCGTGGACACAGGTCTGGATTAGAAAATGAAGGCAGAAGTTCCCAAGGAGAGTTTCA-TTTTCATATT-AAAA-ATGAATTCTCCAGAAAAGGCATTTTACTTTCGCCCCCTGCACATTCTTTCTGCTTGCAATGTGAAAGCGATGTTTAGTTCCCCCTGCACATTCTTTCTGCTTGCAATGTGAAAGCGATGTTTAGAAATGCCGGACATCTTGCAGCCATGAGCACAGAGGGGAAAG-CTATCTGCTAAGAAGGGCACCATGGGAAGCTGAGAGCATCCTGGGCTTCTGGTGGCATTG-TGCAGTGAAGGACTAGGCTACACTC-GTGTTAGTGT-----------------------------------TAGGGCTTTCTGCTATT--CATAGCTCA--GTGTTTCCTAACTGAAACCAGTAGAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188236550 332 - 190850796 actgggatcatggacacagttctggattagaaaataaaggcagaagtTCCCAAGGAGAGTTTCG-TTTTCATGTTAAAAA-ATGAATTCTCCAGAAAAGGCA-CTGACCTTCACCCCCTGCACATTCTT-----------------------------------------------TCTGCTTGCAGCGTGAAGGTGATATTTAGAAGTGCAGGG-----------CATGACCTCAGAGGGGAAAC-CTGTCTGCTAAGAACGACACCACTGGGAGCGGGGAGCATCCTGGACTCCTGATGGCATTG-TACACTGAAGAACCAGGATACACTC-TTGTTAGTGT-----------------------------------TAGGGGTGTCTGGTATT--CACAACTGC--GTGTTTCCGAACTAAAACCAGTAGAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15727371 366 - 59632846 AAAGCGATCACGAACATAGTTCTAGAGAATAGCACAGAGACAGAAGCTTCCCAGGAGAGTTTCATTTTTCAGATT-AAAAGGCAAATGCTTCCAGGAAG-----TGGCTTTCACCT--------TACTC-----------------------------------------------CTTGCTTTGAATATTAAAGTGATATTTAGAAGTGTAGGGTGTCTTGCAACCACGGTCATAGGGAGAAAAACCCACAAGCTAAAAATG-CGAAGCAGGAATCTGGAAG-GTTCTTGGTTCCTAATGGCATTGTTGAAGTGAAGGACTAGGTTAAACTCTTTGTTGGTGTATCGAATATTTGACTTGTCATTTAAGCCACTGGGGTCCGGTTTGCTGCTATT--CATAGCTGAGTGTATTCTTTCACTAAAA----TAGAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84719651 1240 - 129401213 I a score=66599.000000 s hg38.chr4_KI270785v1_alt 50352 25 + 119912 TAATTTT-GATTTTTGTATCTAAACT s panTro4.chr4 190317426 25 + 193495092 TAATTTT-GATTTTTGTATCTAAACT i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111254717 25 + 115148730 TAATTTT-GATTTTTGTATCTAAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181057092 25 + 184069350 TAATTTT-GATTTCTGTATCCAAACT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186394487 25 + 189454096 TAATTTT-GATTTCTGTATCCAAACT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176009771 25 + 178775436 TAATTTT-GATTTCTGTATCCAAACT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132852891 25 + 135778131 TAATTTT-GATTTCTGTATCCAAACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188236882 25 - 190850796 TAATTTT-GATTTTTCTATCCAAAGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15727737 26 - 59632846 TAATTTTAGATTCTCATATCAAAATT i canFam3.chr16 C 0 I 700 e mm10.chr8 84719651 1240 - 129401213 I e ponAbe2.chr4 195283694 7993 + 198332218 I a score=153353.000000 s hg38.chr4_KI270785v1_alt 50377 64 + 119912 TTGTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGggcagggcgt s panTro4.chr4 190317451 64 + 193495092 TTGTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGggcagggcgc i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111254742 64 + 115148730 TTCTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGggcagggcgc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181057117 64 + 184069350 TTCTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGGGTAgggtgc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186394512 64 + 189454096 TTCTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGGGTAgggtgc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176009796 64 + 178775436 TTCTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATCATGAGTAAAATGggtagggtgc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132852916 64 + 135778131 TTCTGGGAGAGCATAAATTCCATCAGATTACCTCAGTTAATAATGAGTAAAATGGGTAgggtgc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188236907 64 - 190850796 TCCTGGGAGAGCATACACTCCATTAGATCACCTCGGTTAATAATGAGTAAAATGggctgggtgc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15727763 700 - 59632846 I e mm10.chr8 84719651 1240 - 129401213 I e ponAbe2.chr4 195283694 7993 + 198332218 I a score=801407.000000 s hg38.chr4_KI270785v1_alt 50441 293 + 119912 ggtggctcacgcctgtaatcccagcactctgggaggcagaggcaggcagatcacttgagatcaggagttcgagaccagact--------gaccaacatagcgaaaccccatcgctgctaaaaatacaaaattagctgggcgtggtggcgcatacctgcaatcccagctactaggatggctgaggcaggagaatcgcttgaacgtgggaggcagaggttgcagtgagccgagatggcaccattgcactccagcctgggcaacaagagcgaaagtccgtctc-------aaaaaaaaaaaaaaaaaaa-------GG s panTro4.chr4 190317515 290 + 193495092 agtggctcatgcctctaatcccagcactctgggaggcagaggcaggcagatcacttgagatcaggagttcgagaccagcct--------gaccaacatggcgaaaccccatcgctgctaaaaatacaaaattagctgggcgtggtggtgcatacctgcaatcccagctactaggatggctgaggcaggagaatcgcttgaacataggaggcagaggttgcagtgagccgagatggcaccattgcacaccagcctgggcaacaggagcgaaactccatctc-------aaaaaaaaaaaaaaaaa----------g i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195291687 291 + 198332218 ggtggctcacgcctgtaatcccagcactctgggaggcagaggcaggcggatcacttgaggtcaggagttcgagaccagcct--------gaccaacatggcgaaaccccatcgctgctaaaaatacaaaattagctgtgcgtggtggcacatacctgtaatcccagctgctaggatggctgaggaaggagaatcgcttgaacatgggaggtggagtttgcagtgagccaagatggcaccattgcacaccagcctgggcaacaagagcaaaactccgtctc-------aaaaaaaaaaaaaaaaaa---------g i ponAbe2.chr4 I 7993 C 0 s nomLeu3.chr7b 111254806 304 + 115148730 ggtggctcacgcctgtaatcccagcactctgggaggcagaggcaggccgatcacttgaggtcaggagttcgagaccagcctgaccaacagaccaacatggcaaaaccccatcgctgctaaaaatacaaaattagctgggcgtggtggcgcatacctgtaatcccagctactaggatggctgaggcaggagaatcgcttgaacctggaaggcagacattgcagtgagccgagatggcaccattgcacaccagcctgggcaacaagagtgaaactccgtctc-------aaaaaaaaaaaaaaaaaaaaa----gag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181057181 301 + 184069350 agtggctcacacctgcaatcccagcactctgggaggcagagaca----gatcacttgaggtcaggcgttcgagaccagcct--------gaccaaaatggtgaaaccctgtcgctgctaaaaatacaaaattagctgggcgtggtggctcatacctggaaacccagctactaggatggccgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatcacgccattgcacagcagcctgggcaacaagagtgaagtgccgtctc--aaaaaaaaaaaaaaaagaaaagaaaaaaaTGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186394576 303 + 189454096 agtggctcacacctgcaatcccagcactctgggaggcagaggca----gatcacttgaggtcaggagttcgagaccagcct--------gaccaaaatggtgaaaccctgtcgctgctaaaaatacaaaattagctgggcgtggtggctcatacctgtaatcccagctactaggatggccgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagatcacgccattgcacagcagcctgggcaacaagagtgaagtgccgtctcaaaaaaaaaaaaaaaaaaaaaaagaaaaaaaTGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176009860 303 + 178775436 agtggctcacacctgcaatcccagcactctgggaggcagaggca----gatcacttgaggtcaggagttcgagaccagcct--------gaccaaaatggtgaaaccctgtcgctgctaaaaatacaaaattagctgggcgtggtggctcatacctgtaatcccagctactaggatggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcacgccattgcacagcagcctgggcaacaagagtgaagtgccgtctcaaaaaataaaaataaaaaagaaagaaaaaaatgag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132852980 289 + 135778131 agtggctcacacctgcaatcccagcactctgggaggcagaggca----gatcacttgaggtcaggagttcgagaccagcct--------ggccaaaatggtgaaactccgtcgctgctaaaaatacaaaattagctgggcgtggtggctcatacctgtaatcccagctactaggatggctgaggcaggagaatcgcttgaacctgggaggcggagg-tgc----agccgagatcacgccattgcacagcagcctgggcaacaagagtaaagtgccgtctc-------aaaaaaaaaaaagaaataaaaaaaTG-- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188236971 293 - 190850796 ggtggctcatgcctgtaatcccagcactctgggaggctgaggcgggcagatcacttgaggtcaggagtttgagaccagcct--------gaccaacgtggagaaaccccgtctctactaaaaatacaaaattagctgggcgtggtggtgcatgcctgtaatcccagctactcggatggctgaggcagaagaatcacttgaacatgggagacagcggttgcagtgagctgatatcgcaccattgcactccagcctgggcaacaagagtgaaactatatttc-------caaaaaaaaaaaaaaaa-------TGAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15727763 700 - 59632846 I e mm10.chr8 84719651 1240 - 129401213 I a score=434905.000000 s hg38.chr4_KI270785v1_alt 50734 138 + 119912 TAAAATGAAGAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGTTTTAGCAGAAATTTAATGAAATAAAAAAG-TGATGAGAAATTAATCAAGAGTATTCAAGATCTAAGTTTTCCTTTGGTGTTGGTTTACTTG s panTro4.chr4 190317805 138 + 193495092 taaaaTGAAGAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGTTTTAGCAGAAATTTAATGAAATAAAAAAG-TGATGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTGGTTTACTTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195291978 138 + 198332218 taaaaTGAAGAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGCTTTAGCAGAAATTTAATGAAATAAAAAAG-TGATGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTGGTTTACTTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111255110 135 + 115148730 taaaaTGAAGAGAATTTCAAGAAGTTCTATTTCAGGCACTATTTTTGCTTTAGCAGAAATTTAATGA---AAAAAAG-TGATGAGAAATTAATCAAGAGTATTCAATACCTAAGTTTTCCTTTGGTGTTGGTTTACTTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181057482 134 + 184069350 TAAAATGAAGAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGCTTTAGCAGAAATATAATGA---AAAAAAG--GAAGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTAGTTTACCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186394879 134 + 189454096 TAAAATGAAGAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGCTTTAGCAGAAATATAATGA---AAAAAAG--GATGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTAGTTTACCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176010163 134 + 178775436 taaaatgaagAGAATTTCAAGAAGGTCCATTTCAGGCACTATTTTTGCTTTAGcagaaatataatga---aaaaaag--gaTGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTAGTTTACCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132853269 123 + 135778131 -----------GAATTTCAAGAAGGTCCATTTCAGGCACCATTTTTGCTTTAGCAGAAATATAATGA---AAAAAAG--GATGAGAAATTAATCAAGAGTATTCAAGACCTAAGTTTTCCTTTGGTGTTGGTTTACCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188237264 134 - 190850796 TAAAATAAAGAGAATTTCATAAAGGTCCATTTCAGATACTATTTTTGCTTTAGCAGAAATTTAATGG---AAAAAAG-TGATGACAGATTAATCGAGAATATTAAAGA-CTACGTTTTCCTTCAGTGTTGGTTTCTTTG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15728463 133 - 59632846 TAAAATGA---GAACGTCATGAATGTTCATTCCAGGTACCATTTTTATTTTAGTAGAAATTGAAGAA---AAACAAGGTTATGAAAAAACCAGTCAGAGTACCAAAGACCTAAATCTTCCTTTGGCGTTGGTTTGCTGG i canFam3.chr16 I 700 C 0 e mm10.chr8 84719651 1240 - 129401213 I a score=3255139.000000 s hg38.chr4_KI270785v1_alt 50872 912 + 119912 TGGAAGATCCCGTGAATCTGGACTGAATTATACCTGATTCCAGTAAGTT-----------------------TCAAACTCAACCCAGCTCAATCCAGGCATGTAATATCTC--AAAA-GGGCCCTCTTTTATTA--GTGTTTAAGGTCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACGGTGAGTCCAGCTGTATTTTACTTCTTACACTTGGTTTCTGAGAAATATAAGTACGTTTTAAATTTAGGGCACCATTCAGCATCATCTAGGAAATACCACACTAATGGTGTGAGAGTTTACTAAATTTTCCTCTTTTACtcagggtacttggtagctagcaatagaaaccaactttggctgg---------tttaatcataaatagattttattgaaaggattttgggtaatttacagaattgccagaagagctgaagaatcagacatggaaaata--ggcagGCTCTATAGG-AGGCAATGCATGGTGACCACAGCCAAACTTCCATCGGGGACAGTCTGG-CGGGGTCTTTCTT-----GTGTCCTGGAATGATGACGGCCAGTGCAGGTCCTGAA----GAATGCAGCTGCCGTGGAC-CCAGTCAGCACCTCTGGT-CAACTGCCCTGGAATGAGAAAGC-ATCCT--CACTGCCTCT-AGAATGCAATTCTCCTCTAACCCTACTTCTTTGCTGAATTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATGAAATTAAAGTTTAAAGCAAT-GAGAGGTAGACAAAACTGGGTACTTATTACGTTCCAAA----TACTTTCCAATTTATTCCCATATCTCTGGAATACATGTTTTTT-AA--AAGGGGTGATGTAAGAATGGGGAAAGCAAAATAATTAAGAAAAAAT-TATGA-AAATAACTGGT s panTro4.chr4 190317943 909 + 193495092 TGGAAGATCCCGTGAATCTGGACTGAATTATACCTGATTCCAGTAAGTT-----------------------TCAAACTCAACCCAGCTCAATCCAG-CATGTAATATCTC--AAAA-GGGCCCTCTTTTATTA--GTGTTTAAGGTCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACGGTGAGTCCAGCTGTATTTTACTTCTTACACTTGGTTTCTAAGAAATGTAAGTACGTTTTAAATTTAGGGCACCATTCAGCATCATCTAGGAAATACCACACTAATGGTGTGAGAGTTTACTAAATTTTCCTCTTTTACtcagggtacttggtagctagcaatagaaaccaactttggctgg---------tttaatcataaagagattttattgaaaggattttgggtaatttacagaattgccagaagagctgaagaatcagacatggaaaata--ggcaggctctatagg-agacaatgcATGGTGACCACAGCCAAACTTCCATCGGAGACAGTCTGG-CGGGGTCTTTCTT-----GTGTCCTGGAATGATGACGGCCAGTGCAGGTCCTGAA----GAATGCAGCTGCCCTGGAC-CCAGTCAGCACCTCTGGT-CAACTGCCCTGGAACGAGAAAGC-ATCCT--CACTGCCTCT-AGAATGCAATTCTCCGCTAACCCTACTTCTTTGCTGAAGTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATGAAATTAAAATTTAAAGCAAT-GAGAGGTAGACAAAACTGGGTACTTATTACGTTCCAAA----TACTTTCCAATTTATTCCCATATCTCTGGAATAC--GTTTTTT-AA--AAGGGGTGATGTAAGAATGGGGAAAGCAAAATAATTAAGAAAAAAT-TATGA-AAATAACTGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195292116 910 + 198332218 TGGAAGATCCCGTGAATCTGGACTGAATGATACCTGATTCCAGTGAGTT-----------------------TCAAACTCAACCCAGCTCAATCCAGGCATGTAATAGTTC--AAAA-GGGCCCTCTTTTATTA--GTGTTTAAGGTCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTATGGTGAGTCCAGCTGTATTTTATTTCTTGCACTTGGTTTCTAAGAAATATAAGTACGTTTTAAATTTAGGGCACCATTCAGCATCATCTAGGAAATACTACACTAATGGTGTGAGAGTTTACTAAATCTTCCTCTTTTACtcagggtacttggtagctagcaatagaaaccaactttggctgg---------tttaatcataaggagattttattgaaaggattttgggtaatttacagaattgccagaagagctgaagaataagacatggaagata--ggcaggcaCTATAGG-AGGCAATGCATGGTGACCACAGCCAAACTTCCATCGGGGACAGTTTGG-CGGGGTCTTTCTC-----GTGTCCTGGA---ATGACGGCCAGTGCGGGTCCTGAA----GAATGCAGCCGCCATGGAC-CCAGTCAGCACCTCTGGT-CTACTGCCCTGGAACGAGAAAGC-ATCCT--CACTGCCTCT-AGAATGCAATTCTCCTCTAACCCTACTTCTTTGCTGAATTGCTCCACATTCAAAGATGTGGGCATCAGTGTTTG----CCTGAATCTAGTA-----ATGAAATTAAAATTTAAAGCAAT-GAGAGGTAGACAAAACTGGGTACTTATTACGTTCCAAA----TACTTCCCAATTTATTCCCATATCTCTGGAATATATATTTTTTAAA--AAGGGGTGATGTAAGAATGGGGAAAGCAAAATAATTAAGAAAAAAT-TATGA-AAATAACTGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111255245 891 + 115148730 TGGAAGATCCCGTGAATCTGGACTGAATTATACCTGCTTCCAGTAAGTT-----------------------TCAAACTCAACCCAGCTCAATCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTTATTA---TGTTTAAGGTCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACAGTAAGTCCAGCTGTATTTTACTTCTTACACTTGGTTTGTAAGAAATATAAGTATGTTTTAAATTTAGGGCACCATTCAGCATCATCTAGGAAATACTACACTAATGGTGTGAGAGTTTACTAAATCTTCCTCTTTTACtcagggtacttggtagctagcaatagaaaccaactttggcagg---------tttaatcataaagagattttattgaaaggattttgggtaatttacagaattgccagaagagctgaagaatcagacatggaaaata--ggcaggcaCTATAGG-AGGCAATGCATGGTGACCACAGCCAGACT--------------------AGGGGTCTTTCTC-----ATGTCCTGGAATGATGAAGGCCAGTGCGGGTCCTGAA----GAATGCAGCTGCCATGGAC-CCAGTCAGTGCCTCTGGT-CTACTGCCCTAGAACGAGAAAGC-ATCCT--CACTGCCTCT-AGAATGCAATTTTCCTCTAACCCTACTTTTTTGTTGAATTGCTCCATATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATGAAATTAAAATTTCAAGTAAT-GAGAGGTGGACAAAACTGGGTACTTACTGCGTTCCAAA----TACTTTCCAGTTTATTCCCATATCTCTGGAATATATATTTTT--AA--AAGGGATGATGTAAGAATGGGGAAAGCGAAATAATTAAGAAAAAAT-TATGA-AAATAACTGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181057616 912 + 184069350 GGGAAGACCCCATGAATCTGTAATGAATTATACCTGATTCCAGTAAGTT-----------------------TCAGACTCAACCCAGCTCAACCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTTGTTA--GTGTTTAAGGGCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACAGTGAGTCCAGCTGTATTTTACTTCTTACTCTTGGTTTCTAAGAAATAGAAGTACGTTTTAAATTTAGGGCATCATTCAACATCATCTAGGAAATACTACACTAATGGCATGAGAGTTTACTAAATCTTCCTCTTTTACtcagggtacttggtagctggcaatagaaaccaactttggctgc---------tttaatcataaagagattttattgaaaagagtttgggtaattcacagaattgccagaagagcggaagaatcagacatggGAAACA--GGCAGGCACTGTAGG-AGGCGAAGTCTGGTGACCACAGCCAAACTTCCGTCGGAGACAGTTTGGCAGGGGTCTTTCTC-----GTGTCCCGGAATGATGACTGCCAGTGCGGGGCCCGAA----GAATGCAGCCACCATGGAC-CCAGTCAGCACCTCTGGT-CTACTGCCCTGGAACAAGAAAGC-ATCCT--CACTGCGTCT-AGAATGCAATTCTCCTCTAACCCTACTTCTTTGCTGAATTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATAAAATTAAAATTTAAAGCAAT-GAGAGGTGGACAAAAGTGGGTACTTATTATGTTCCAAA----TACTTTCCAATTTATTCCCATATCTCTGGAATATAT-TTTTTT-AA--AAGAGATGATGTAAGAATGGGGAAAGCAACATAATTAAGAAAAAAA-TATGA-AAATAACTGGT i rheMac3.chr5 C 0 I 143 s macFas5.chr5 186395013 912 + 189454096 GGGAAGACCCCATGAATCTGTAATGAATTATACCTGATTCCAGTAAGTT-----------------------TCAGACTCAACCCAGCTCAACCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTTGTTA--GTGTTTAAGGGCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACAGTGAGTCCAGCTGTATTTTACTTCTTACTCTTGGTTTCTAAGAAATAGAAGTACGTTTTAAATTTAGGGCATCATTCAACATCATCTAGGAAATACTACACTAATGGCATGAGAGTTTACTAAATCTTCCTCTTTTACtcagggtacttggtagctggcaatagaaaccaactttggctgc---------tttaatcataaagagattttattgaaaagagtttgggtaattcacagaattgccagaagagcggaagaatcagacatgggaaaca--ggcaggcaCTGTAGG-AGGCGAAGTCTGGTGACCACAGCTAAACTTCCGTCCGAGACAGTTTGGCAGGGGTCTTTCTC-----GTGTCCCGGAATGATGACTGCCAGTGCGGGGCCCGAA----GAATGCAGCCACCATGGAC-CCAGTCAGCACCTCTGGT-CTACTGCCCTGGAACAAGAAAGC-ATCCT--CACTGCGTCT-AGAATGCAATTCTCCTCTAACCCTACTTCTTTGCTGAATTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATAAAATTAAAATTTAAAGCAAT-GAGAGGTGGACAAAAGTGGGTACTTATTACGTTCCAAA----TACTTTCCAATTTATTCCCATATCTCTGGAATATAT-TTTTTT-AA--AAGAGATGATGTAAGAATGGGGAAAGCAACATAATTAAGAAAAAAA-TATGA-AAATAACTGGT i macFas5.chr5 C 0 I 327 s papAnu2.chr5 176010297 912 + 178775436 GGGAAGACCCCATGAATTTGTAATGAATTATACCTGATTCCAGTAAGTT-----------------------TCAGACTCAACCCAGCTCAACCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTCGTTA--GTGTTTAAGGCCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTATTAGAATGGGACTGATCTATGCAGTACAGTGAGTCCAGCTGTATTTTACTTCTTACTCTTGGTTTCTAAGAAATAGAAGTACGTTTTAAATTTAGGGCATCATTCAACATCATCTAGGAAATACTTCACTAATGGCATGAGAGTTTACtaaatctttctcttttactcAGGGTACTCGGTAGCTGGCAATAGAAACCAACTTTGGCTGC---------TTTAATCATAAAGAGATTTTATTGAAAGGATTTTGGGTAGTTCACAGAATTGCCAGAAGAGCAGAAGAATCAGACATGGGAAACA--GGCAGGCACTGTAGG-AGGCGAAGTCTGGTGACCACAGCCAAACTTCCATCGGAGACAGTTTGGCAGGGATCTTTCTC-----GTGTCCCGGAATGATGACTGCCAGTGCGGGTCCTGAA----GAATGCAGCCACCATGGAC-CCAGTCAGCACCTCTGGT-CTACTGCCCTGGAACAAGAAAGC-ATCTT--CACTGCGTCT-AGAATGCAGTTCTCCTCTAAACCTACTTCTTTGCTGAATTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATctagta-----ataaaattaaaatttaaagcaat-GAGAGGTGGACAAAAGTGGGTACTTATTACGTTCCAAA----TACTTTCCAATTTATTCCCATATctctggaatatat-tttttt-aa--aagggatgaTGTAAGAATGGGGAAAGcaacataattaagaaaaaaa-tatga-aaataactggt i papAnu2.chr5 C 0 I 327 s chlSab2.chr7 132853392 913 + 135778131 GGAAAGACCCCGTGAATCTGTAATGAATTATACCTGATTCCAGTAAGTT-----------------------TCAGACTCAACCCAGCTCAACCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTTGTTA--GTGTTTAAGGCCAAGG--ATTTTTCCAGGGTTATTAAGTGGAATTTCTGTGACAACTTGAAATCTGGTGTTAGAATGGGACTGATCTGTGCAGTACAGTGAGTCCAGCTGTATTTTACTTCTTACTCTTGGTTTCTAAGAAATAGAAGTACGTTTTAAATTTAGGGCATCATTCAACATCATCTAGGAAATACTACACTAATGGCGTGAGAGTTTATTAAATCTTCCTCTTTTACtcagggtactcggtagctggcgatagaaaccaactttggctgc---------tttaatcataaagagattttattgaaaagattttgggtaattcacagaattgccagaagagcggaagaatcagacatggGAAACA--GGCAGGCACTGTAGG-AGGCGAAGTCTGGTGACCACAGCCAAACTTCCGTCGGAGACAGTCTGGAAGGGGTCTTTCTC-----GTGTCCCGGAATGATGACTGCCAGTGCGGGGCCCAAA----GAATGCAGCCACCATGGAC-CCAGTCAGCACCTCTGGT-CTACTGCCCTGGAACGAGAAATC-ATCCT--CACTGTGTCT-AGAATGCAATGCTCCTCTAACCCTACTTCTTTGCTGAAGTGCTCCACATTCAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTAGTA-----ATAAAATTAAAATTTAAAGCAAT-GAGAGGTGGACAAAAGTGGGTACTTATTACGTTCCAAA----TACTTTCCAATTTATTTCTATATCTCTGGAATATATATTTTTT-AA--AAGGGATGATGTAAGAATGGGGAAAGCAACATAATTAAGAAAAAAA-TATGA-AAATAACTGGT i chlSab2.chr7 C 0 I 329 s calJac3.chr3 188237398 934 - 190850796 CGGAAGATCCTGTGAATCTGGACTGAATTGTACCTGATTCCAGTAAATCAAAAGAAGTAAATAAGAAATAAATCAAACTCAACCCAGCTCAACCCAGGCATGTAATAGCTC--AAAA-GGGCCCTCTTTTATTA--GTGTTTAAGGTCAAGG--ATTTTTCCAGGATTATTAAGT-GAATTTCTGTGACAACATGAGATTTGGTATGAGAATGTGACTAAT-TATGCAGCACAGTGAGCCCCGCTACATTTTCCTTCTTACTCTTGGTTTCTAAGAAATATGAGTAAGTTATAAATGTAGGGCACCATTCAGCATCATCTAGGAAATAGAATGCGAATGGTGTGAGAGTTTACTAAATCTTCCTTTTTTACtcagggtacttgacagcgagcaataaaaaccagttttggctgg---------tttaatcataaagagattttattgaaaggatttggggtaatttacagaattgccagaggagctgaagaatcagccatggaaaata--ggcaggcaCCATGGG-AGGTAATGCATGGTGACCACAGCCAAACTTCCATCAGGGACATTCTGGCAGGGATCTTTCTC-----GTGTCCAAGAATGATGCAGGCCAGTGCAGATCCTGAA----GAATGCAGCCAGTATGGAC-ACAGTCAGCACCTCTGGT-CTAGTGCCCTGTAAAGAGAAAGC-ACCCT--CACTGCCTCT-AGGATGTGATCCTCCAGTAACCCTATTTCTTTGCTGAACTGCTCCACATTTAAAGATGTGGGCATCAGTGTCTG----CCTGAATCTGGCA-----ATAAAATTAAAATCTAAAGCCAT-GAGAGGTGGACAAACCTGGGTACTTATTAGGTTCCAAA----TCCTTTCCAATTTATTCCCATGTCTCTGGAATATAT-TATTTT-AA--AAGGGATGATCTACGAATGGGGAAGACAAAGTAATTAAGAAAAAAACTATTA-AAATACCCGGT i calJac3.chr3 C 0 C 0 s mm10.chr8 84720891 889 - 129401213 tGAAAGATCCTGTGAATCTGGACTGACTTGGACCCGATTTGTGTGAGTT-----------------------TCAAACTC-----------ACTCAGGTATGTAATCATCCCGAAAA-AAGCCCTCTTTTACTA--GAGTTTAACTTCAGGATTTTTTTTTCAGGGCCATTAACTGGAATTTCTATGTCAACCCGAGAGCTGGTGTAAGAATGACAGTG--TTGTACAATATAATGAGTCCAACTATATTTTACCTCTTACTCTTGGTTCCGAAGGAACGG------GTGATAAATTTAGGGCGCCACATAGCACTGGCCAGGAAACAGTACACTAATGGCCCAAAAGTCCAATGAATCTCTCtgttttactcagggcactgtgtggccagctatagaaaccaactctgtctggaaatagaaactgacttggaaagggattttactggaaggatgttgggaaattcacagtatttccagaaaagctggagaaTGTGATATGGAAAAGG--AGCAGGCGCTGTGGG-TGGTGTTGCACGTTGACCTCGGCCA-ACTTTCATTTGGGGCAATCTGGCAAACATGTTCCTT-----TTGTCACAGAGTGATGGAGGCCAGCATGTGCCCTGGA----TGCTGCAGCAG--ACGATG-CTAGTCACCACTTCTGGTGCCACCACACAGCTAAGGGAAAACAATTAC--CATGAATTCTGAGACAGTGGTCCTCCTCTGACACAGCTTCTTTATTCTCTGGCTCCATGATCA------TTGGCATCAGTAGCTGACATCCTGAAT-TGTAG-----ACCATATTAAATTGTAGAGTGATAGAAAAGTGGACTGAACAGCATA--TCATGTGTTCCAAA--------------TTCATTTCCATGTCTCT-GAATGTTT-TATTTA-AAGGAAGGGATGGTATAAAAACTGAGAAAACA----GATTGGAAAGACGT-TGTGG-AAACAGCTATT i mm10.chr8 I 1240 C 0 s canFam3.chr16 15728596 908 - 59632846 GGGAAGATCCAGTGAATCTGGACTAAACTGTACCCAATTCCAGGAAGTT-----------------------TCA----------AGCTCAACTCTGGTATCTAATAGCCC--AAAAGGGGTCCTCTTTTATTACCGTATTTAACTTCAGGG--ATTATTCCAGGGTTATTAAATGGAATTCCTATGACAGCCTGAAATCTGGTGTTAGCATGAGACCAATCTATTCAATATAATGAATCTAGCCCTATTTTACCAGTTTCTTTTGGTTCCTAAGAAATATATGTAAGTTATAAGTGTAGCGTACCAT----------CTAGGAAATAGTACACTAATGGTCTAAAAGCCCAATAAATCTCCCCGTTTTACtctgggtactttgtggctagaaatagaaaccaactttggctgg---------tttaaacaagaaagtattttatt--aaggatgttgggtaattcataaaatcatcagaatagctggagaatgagacatgaggaatatgggcaggcacCAAGGGCAGGCAG---ATGATGGCCACAGCCAAACTTCCATCTGGGACAGTCTGGCAGGAATGTTTTTCCCTTGTTGTGAAGGGACAAAGGAGGTCAGTGCTGGTCCTGGATAGTGAGTGCCGCAAACACAAGCTCCAGTCACTATCCTGCCT-CCCTTGTCTTGGGAAGAGAAAAG-GGCTTACTAGGGCCTCC-AGATCAGAATTTTCCTTTGACCTAGCTTCTTTGCCCACTTGTTCCAAGCT------TGTGGATCTCAGTGTCTG----TGGGAAGTTAGCAAGGAGATTAAATTAAAATTTAAAGAAAT-GATAGTTGGGCAAAATGTAGTACTTACTAGGTTCCGAAGGATTGATTTCTAACTTACTCTCTTACCATCAGATTATTT-TATTAA-AT--AACGGATGGTGCTACAATGCAGCCAACTAAGTAATTTTTAAAA-AT-TGTGACAAATGAGTGGT i canFam3.chr16 C 0 C 0 a score=783532.000000 s hg38.chr4_KI270785v1_alt 51784 247 + 119912 TGATGGAATAATTGAACGGAATAAATGGAATAATGAAAGGATGTCAAAGACCTTCGTGCATTACGTGTATATAGC-----TCTGAAGTGTGTGTATATAACTCTGATGGATGTGTT---GAG---ATTTGGCTCTGAGTGAGGGACTCTTGCAGGAAAAAGAAATAAACATGCACGTTAACTTGCTCTTCTACCCTGTCTTAGGCAATTCATCCAGATGAATTTTTAACTATCCCGTAGTGATGGGGCATCCAGGCCG s panTro4.chr4 190318852 247 + 193495092 TGATGGAATAATTGAACGGAATAAATGGAATAATGAAAGGATGTCAAAGACCTTCGTGCATTACGTGTATATAGC-----TCTGAAGTGTGTGTATATAACTCTGATGGATGTGTT---GAG---ATTTGGCTCTGAGTGAGGGACTCTTGCAGGAAAAAGAAATAAACATGCACGTTAACTTGCTCTTCTACCCTGTCTTAGGCAATTCATCCAGATGAATTTTTAACTTTCCCATAGTGATGGGGCATCCAGGCCG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195293026 247 + 198332218 TGATGGAATAATTGAATGGAATAAATGGAATAATGAAAGGATGTCAAAGACCTTCGTGCATTACGTGTATATAGC-----TCTGAAGTGTGTGTATATAACTCTGATGGATGTGTT---GAG---ATTTGGCTCTGAGTGAGGGACTCTTGCAGGAAAAAGAAATAAACAAGCATGTTAACTTTCTCTTCTACCCTGTCTTAGGCAATTCATCCAGATGAATTTTTAACTATCCCGTAGTGATGAGACATCCAGGCCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111256136 246 + 115148730 TGATGGAATAATTGAATGGAATAAATAGAATAATGAAAGGATATCAAAGACCTTCGTGCATCACGTGTATATGGC-----TCTGAAGTGTGTGTATGTAACTCTGATGGATGTGTT---GAG---ATTTGGCTCTGAGTGAGGGAATCTTGCAGGAAAAA-AAATAAACAAGCATGTTAACGTTCTCTTCTACCCTGTCTCAGGCAATTGATCCAGATGAATTTTTAACTATCCCATAGTGATGGGGCATCCAGGCCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181058671 244 + 184069350 TGATGGAATAATTGATTGGAATAAATGGAATAATGAAAGGCTGTCAAAGACCTTCATGCATTACGTGTATACAGC-----TCTGAAGTGTGTGT-TATAACTCTGATGTATGTGCT---GAG---ATTTGGCTCTGAGTGAGGGACTCTTGCAGGAAAAAGAAATAAACAAGTATGTTAACTTTCTCTTCTACTGTGTCTCAGGCAATTCTTCCAGATGAATTTTTCACTATCCC--AGTGATGGGGCATCCAGGCCT i rheMac3.chr5 I 143 C 0 s macFas5.chr5 186396252 244 + 189454096 TGATGGAATAATTGATTGGAATAAATGGAATAATGAAAGGCTGTCAAAGACCTTCATGCATTACGTGTATACAGC-----TCTGAAGTGTGTGT-TATAACTCTGATGTATGTGCT---GAG---ATTTGGCTCTGAGTGAGGGACTCTTGCAGGAAAAAGAAATAAACAAGTATGTTAACTTTCTCTTCTACTGTGCCTCAGGCAATTCTTCCAGATGAATTTTTCACTATCCC--AGTGATGGGGCATCCAGGCCT i macFas5.chr5 I 327 C 0 s papAnu2.chr5 176011536 244 + 178775436 TGATGGAATAATTGAATGGAATAAATGGAATAATGAAAGGCTGTCAAA-ACCTTCATGCATTACGTGTATACAGC-----tctgaagtgtgtgtgtataactcTGATGTATGTGCT---GAG---ATTTGGCTCTGAGTGAGGGACTCttgcaggaaaaagaaataaacaagtatGTTAACTTTCTCTTCTACTGTGTCTCAGGCAATTCTTCCAGATGAATTTTTCACTATCCC--AGTGATGGGGCATCCAggcct i papAnu2.chr5 I 327 C 0 s chlSab2.chr7 132854634 245 + 135778131 TGatggaataattgaatggaataaatggaatAATGAAAGGCTGTCAAAGACCTTCGTGCATCACGTGTATACAGC-----TCTGAAGTGTGTGTGTATAACTCTGATGTATGTGTT---GAG---ATTTGGCTCTGAGTGAGGGACTCTCGCAGGAAAAAGAAATAAACAAGTATGTTAACTTTCTCTTCTACCGTGTCTCAGGCAATTCTTCCAGATGAATTTTTCACTATCCC--AGTGATGGGGTATCCAGGCCT i chlSab2.chr7 I 329 C 0 s calJac3.chr3 188238332 230 - 190850796 TGATGGAATAATTG---------AAGGGAACAATGAAAGAATGTCAGAGACCTTAGTGCATTGCACGTATATTGC-----TCTGAAGTG--------TCACTCCGATGCACATGTT---GAG---ATTTGGTGCTGAGTGAGGGATTCTCGCAGGAAAAAGAAATAAACAAGTAAGCTAACTTTCTCTTCTACCCTGCGTCAGACAGTGCATCCAGATGAATTTTTAAATATCCCATAATGATGGGGCATCTAGGCCt i calJac3.chr3 C 0 I 310 s mm10.chr8 84721780 236 - 129401213 TAATGGAATA---------CATAAAGGGCCTAATCAAAGGCTGTCTGAGTGTCTAGCATGTGACATA-GTGTAGG-----AAAAAGATACATCT---TGCCTTTAACCTGTGTGTTTGGGAA---GTTTGCCTCTCAGAATGGTGCCAATTCAGAAAGAAGCAATAAGCAAGAATGTTATATTTCTCCTCTACCCTGTCTCAGGCAGTTTAGTCAGATGAGCCTTTGTGTATCTCATGGCGGATGAGCATCCAGGTC- i mm10.chr8 C 0 C 0 s canFam3.chr16 15729504 224 - 59632846 TGTTGAGTTA----------TTAAATGAGATAACAA----TTGCTGGACATCTTGGTGTATGACACACATACAGCAAGAATCTAAAATG--------AGACTCTGGTGTGTATATT---GGAGTCATTTGGCTTTGGGTATAGGGCTGACACAGGAAAAGTAAATCAA---------TAGCTTTTTCCTCTATCCTGTTTCAGGCAACTCTGTCAGAGGAGTCTTAAAAAATCCCATGGTGATTGGGCATCCAGGCCT i canFam3.chr16 C 0 C 0 a score=2729089.000000 s hg38.chr4_KI270785v1_alt 52031 787 + 119912 TATTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTACACTAATAACTTTGCATCAAAA-TTTATGCAGTTTAGTGTGTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGCGGCATTTT-CCCTTCCGTTTGGTTAATTATGATTTACTTCTGTTAGTTTCCAAGACCCCATTTCACCGAGTTCACATGGTGTTGTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATGTTAAGAGTTGG-AAAACAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGGAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCAGATCTGAACTCTAATCAGTCAAGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCAGTCTTAAAGAAGACAGCCT-AAAAGAAAAGGAAAAAACGTTCTCACCCTAGAGCATTTTTATGCAAAACGATGAAATTTATAGGAAAATTGGAAACAGTC---------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACGGTG--AACTAACTGTGGCATAATCATTATTTGTGTTGATACTATTAAACGTTTTGGGGGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCCCCAATGAGCAGATTATTTCCTGCGGATATATGTTCCTGCA s panTro4.chr4 190319099 788 + 193495092 TATTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTACACTAATAACTTTGCATCAAAA-TTTATGCAGGTTAGTGTGTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGCGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTGTTAGTTTCCAAGACGCCATTTCACCGAGTTCACATGGTGTTGTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATGTTAAGAGTTGG-AAAACAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGGAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCAGATCTGAACTCTAATCAGTCAAGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCAGTCTTAAAGAAGACAGCCT-AAAAGAAAAGGAAAAAACATTCTCACCCTAGAGCATTTTTATGCAAAACGATGAAATGTATAGGAAAATTGGAAACAGTC---------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACGGTG--AACTAACTGTGGCATAATCATTATTTGTGTTGATACTATTACATGTTTTGGGGGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCCCCAATGAGCAGATTAGTTCCTGCGGATATATGTTCCTGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195293273 788 + 198332218 TATTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTATACTAATAACTTTGCATCAAAA-TTTATGCAGTTTAGTGTCTGTGGCAAATGGCTTGTGCCTTTAGTTTCACTTCCTTGAGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTTTTAGTTTCCAAGACCCCATTTCACCGAGTTCACATGGTGTTCTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTAGAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATGTGAAGAGTTGG-AAAACAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTCAGTGTCAAATCTGAACTCTAATCAGTCAAGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCAGTCTTAAAGAAGACAGCCT-AAAAGAAAAGGAACGAACATTCTCACCCTAGAGCATTTTTATGCAAAATGATGAAATTTACAGGAAAATTGGAAACAGTC---------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACAATA--AACTAACTGTGGCATAATCATTATTTGTGTTGATACTATTAAACGTTTTGGGGGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCCCCAATGAGCAGATTAGTTCCTGCGGATACATGTTCCTGCA i ponAbe2.chr4 C 0 T 7988 s nomLeu3.chr7b 111256382 788 + 115148730 TATTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTATACTAATAACTTTGCATCAAAA-TTTATGCAGTTTAGTGTCTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGAGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTCTTAGTTTCCAAGACCTCATTTCACGGAGTTCACATGGTGTTCTGAGTAATAACTTGACTCTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATGTTAAGAGTTGG-AAAACAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTAGAAGATTTTTAGTGTCAGATCTGAACTCTAATCAGTCAAGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCAGTCTTAAAGAAGACAGCCT-AAAAGAAAAGGAAAAAACATTCTCACCCTAGAGCATTTTTATGCAAAATGATGAAATTTACAGGAAAATTGGAAACAGTA---------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACACTG--AACTAACTGTGGTGTAATCATTATTTGTGTTAATAGTATTAAACATTTTGGGGGAATCTCGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCCCCAATGAGCAGATTAGTTCCTGCGGATATATGTTCCTGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181058915 785 + 184069350 TACTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTATACTAATAACTTTGCGTCAAAA-TGTATGCAGTTTAGTGTCTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGAGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTTCTAGTTTCCAAGACCCCATTTCACCGAGTTCACATGGTGTTCTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATATTAAGAGTTGGAAAAAAAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCACATCTGAACTCTAATCCGTCAGGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCGGTCTTAAAGAAGACAGCCC-AAAAGAAAAGGAAAAAACAGTCTCATCCTCCAGCATTTTTATGCAAAATGATGAAATTTACAGGAAAACTGGAAAC-------------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACAATG--AAGTAACTGTGGCATAATCATTATTTGTGTTAATACTATTAAACGTTTTGGGAGAATCTGGTTT------------------------ACTCGATTAAAAccaggatgctttcttttcactaatgagcagattagttcctgtggatatatgttcctgcg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186396496 784 + 189454096 TACTTTTTAAAATGTGCAATTAGAGTAAACAATTTAGAATCCTGTGCTCAC---C--TTATACTAATAACTTTGCGTCAAAA-TGTATGCAGTTTAGTGTCTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGAGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTTCTAGTTTCCAAGACCCCATTTCACCGAGTTCACATGGTGTTCTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATATTAAGAGTTGG-AAAAAAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCACATCTGAACTCTAATCCGTCAGGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCGGTCTTAAAGAAGACAGCCC-AAAAGAAAAGGAAAAAACAGTCTCATCCTCCAGCATTTTTATGCAAAATGATGAAATTTACAGGAAAACTGGAAAC-------------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACAATG--AAGTAACTGTGGCATAATCATTATTTGCGTTAATACTATTAAACGTTTTGGGAGAATCTGGTTT------------------------ACTCGATTAAAACCAGGATGCTTTCTTTTCACTAATGAGCAGATTAGTTCCTGTGGATATATgttcctgcg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176011780 784 + 178775436 tactttttaaaatgtgcaattagaGTAAACAATTTAGAATCCCGTGCTCAC---C--TTATACTAATAACTTTGCATCAAAA-TGTATGCAGTTTAGTGTCTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGAGGCATTTTTCCCTTCCGTTTGGTTAATTATGATTTACTTCTTTTAGTTTCCAAGACCCCATTTCACCGAGTTCACATGGTGTTCTGAGTAATAACTTGACTGTTGTAATTGTCTTCCGGGATTAATCCTGTTTGTATTGGAGGGTTACAAGCATTCTCACCAGAGGGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAA-TTCACAAATGTTAagacttgg-aaaaaaatgaaaaccaaaaatttgGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCACATCTGAACTCTAATCCGTCAAGGAGAAAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCGGTCTTAAAGAAGACAgccc-aaaagaaaaggaaaaaacagtctcATCCTCCAGCATTTTTATGCAAAATGATGAAATTTAcaggaaaactggaaac-------------------aatt-----------------tcTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACAATG--AAGTAACTGTGGCATAATCATTATTTGCGTTAATACTATTAAACGTTTTGGGAGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCACTAATGAGCAGATTAGTTCCTGCGGATATATGTTCCTGCG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132854879 784 + 135778131 TACTTTTTAAAATGTGCAATTAGAGTAAACGATTTAGAATCCTGTGCTCAC---C--TTATACTCATAACTTTGCATCAAAA-TGTATGCAGTTTAGTGTCTTTGGCAAATGACTTGTGCCTTTAGTTTCACTTCCTCGAGGCATTTTTCCCTTCTGTTTGGTTAATTATGATTTACTTCTTTTAATTTCCAAGACCCCATTTCACCAAGTTCACGTGGTGTTCTGAGTAATAACTTGCCTGTTGTAACTGTCTTCCGGGATTAATCCTGTTTGTGTTGGAGGGTTACAGGCACTCTCACCAGAGAGGATGCTTT-----------------AGAAG------------TTTTGCATTATTCATGTGTAAGGCAAG-TTCACAAATGTTAAGAGTTGG-AAAAAAATGAAAACCAAAAATTTGGTCTAAAATCCTTTTTGTAGAACTGAGGAAGACAGATGGTCTGGAAGATTTTTAGTGTCACATCTGAACTCTAATCCGTCAAGGAGAGAAACTTTCAGAACTGGGTGGTCAAAATGGCATCCTAGGAATTTT--GAC-TTGCGGTCTTAAAGAAGACAGCCC-AAAAGAAAAGGAAAAAACAGTCTCATCCTCCAGCATTTTTATGCAAAATGATGAAATTTACAGGAAAACTGGAAAC-------------------AATT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATATACAGACAATG--AAGTAACTGTGGCATAATCATTATTTGTGTTAATACTATTAAACGTTTTGGGAGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATTCTTTCTTTTCACTAATGAGCAGATTAGTTCCTGTGGATATATGTTCCTGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188238872 793 - 190850796 TATTTTTTTAAATCTGCAGT-----TAAACAATTTGGAATCCTGTGCTCAC---CTTTTATACTAATAACTTTGCATCAAAA-TTTATGCCGTTTAGTGTCTTTGGCAAGTGACTTGTGCCTTTAGTTTTAATTCCTTGAGGCATTTT-CCCTTCCATTTAGTTAATTATTTTTAACTTGTTTTGGTTTCGAAGACCCTGTTTCACTGAGTTCACATGTTGTTCTGAGTAATTCCTGGACTCTTGTAATTGGCTTCCGGGGTGAATCCTGCTTGTGTTGGAGTGTTACAAGCATTCGCATCGGAG-GGATGCTTT-----------------AGAAG------------GTTTGCATTACTCATGTGTAAGGCAGA-TTCTTAAATGTTAAAAGTTGG-GAAAAAATGAAAACCAAAAATTTGGTC-AAAATCGTTTTTGTAGAACTGAGGAAGACAGACGG----GAAGATGTTTAGTGTCAGATGGGAACTCTAATCAGTGAAGGAGGGAAACTTTCAGAACTGGGTGTTCAAAATGGCATTCTAGGAATTTT--GGC-TTGCAGTGTTAAATAAGATGGCCTAAAAAGACAAGGAAAAAACATTGTCAGCCTCAAGCATTTTTATACAAAATGATGAAATTGAGAAGAAAACTGGAAGCAGTC---------------AATTGTTACTCAAAACTCTCGTCTG--------AGAAT--------------------------------------------------------------------------------------------TATATTCAGACGGTG--AACTAACCGTAGCATAATCATTATTCGTGTTAATATTGTTAAACATTTGGGGGGAATCTGGTTT------------------------ACTTGATTAAAACCAGGATGCTTTCTTTTCCCCAGTGACCAGATTAGTTCCTGCGGATGTG---TCCTGCA i calJac3.chr3 I 310 C 0 s mm10.chr8 84722016 875 - 129401213 ----TGTTAACGTGTACAAT-----GAAGTAGTCTGGAA-ACTGTGATCACTCAC--TTACATTAGTCTTTTTGTTTGGTTC-TTTATACAGTTTAGTGTCTTTGGTGAATCAGTTTTGACTCTAGCCTCCCTCCCTCTCAATGTTTC-ACAACCCTTTTGGTGAATCTTGATTTATTT-TTCCAGTTCCTGTCAC-CTGTATAACCCAAGGCACATGGGGGTTTGAGGAACTG--TAACTGTCACAGTTGTCATCTGGTGTGGG-CCGATTTTTGTAACAGAGTTACAGGTGTCTTTTCCGGAAGGGA-------------------------------------------TGCACAATTCATGTGGAAGGCAAACCCCACA-----TAGGTATTGG-AAAGGAGTT--CACTAAGAACTGATTCTTGTGTTCTTTCCATAGAAAC-AGGGGGACAAATGGCCTGGAGGACTTTTGGTG--AGATTTGAGTTCTCATTAGTCAAGGACAGATGATTTTGGAAGTAGGTGGTCAAAATGGCATTC-AGGAATTTTCAGAA-GTACATTCATAAAATTGAGAGCCT-GGAAGATAAAATAAAATAAAATTCACCCATAAGCATTTTTATGGAAGGTGGTGATGT------AGAAATTGGGGACGGACAGCCTTTTGAAACATAATT-----------------TCTATTTAAGTTAAAATATGCTTGCTTACCTTTCCACTTTCTTTTCCTCTTTCCAGTCCTCTTCATGAATCCACCCTTGCTTTTTATAACTTCTATTTttaattgctggtgtgtgcatgcatggataagtatgtatgtatcaatgtatgtatgtgtgcgtattcctagatatataaatACAATCTAGTACTGGTAAGACCACTATTTGTGTTGGATTTAATCAAACCCACG----CTTCTTTTCCTAAGTG-CCTAATCAGGTCCCATGGACATGCA-------- i mm10.chr8 C 0 C 0 s canFam3.chr16 15729728 737 - 59632846 TATTTTTTTAAA-----AAT--------ACAATTTAGA---------TTAC---C--------CAATACCTTTGCATTGGTCTTTTATACAGTTCAGTGTCTTTGGCAAATTACTTATACTTTTAGATTTACTTCCTT-------------------TTTCATTAATTTTGATTTATTTATTTCAGTTTCCATCACCTCATTTAACTCTGTTCTCATGATATTCTGAGTAATAA-TTCACTGTTGTAATTGTCATCCAGGATTAATCCTGTTTGTACTGGAGAGTTACAAAAGTTCCTACCAGAGGAGATTCTTTTTTTTTTTTTTTTTCAGAGGAGATTCTTTACCAAGTTTGCATTATTCATGTGTAAAGCAAA-TACACAAATGTTAAGAGTTGG-AAAGAAA-GAAAACCAAGAATTTGATCTA-----------------------AAGACAGATGGCCTGGAAGATTTTTGGTGTCAGATCTGAACTCTAATCAGTCAAAGAGAGATATTTGCAGAACTGGGTGGTCAAAATGGCATCCCAAGAATTTT--CACACTTTACTCTTCAATAGGAGAGCCT-AAAACTCAGTTCAAAGAAATGCTCACCCTCGAGCATTTTTATGCAAAATGATGAACTTTAGAGGAAAATTAGAAACAGCC---------------AGAT-----------------TCTG--------AGAAT--------------------------------------------------------------------------------------------TATACACA----ATG--ATCTAACTGTGGCATGATCATTATTTGTGTTAATACTACTAAATGTTTTGGGGAA-----TTTT------------------------GTTTGATTACAATCAAGATTCTTTCTTTTCTC-AATGACTAGATCAGGAACTGTTGACATATGTTCCCGCG i canFam3.chr16 C 0 C 0 a score=1268242.000000 s hg38.chr4_KI270785v1_alt 52818 371 + 119912 GTCTTCGTTCATTGCACTGATAACAAGTGTAatttctttattgtctgtgttct---ctagttt---gtaagtttcagacag-gggagttaggtctaccttctt-cttct-tgttcccctcttccagcacatatgtacgtggcacatagtaaatctttcattatttgttgaTC----AGTTGCCTAACAGGAGCATGGAAGTAAATGAATTATATTTGGAACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGTCTTAGTTCTTGACTCTTCAAAACTCTTGTTAGTTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTCTGCAAATCCTTGGAAAGGACCAAT s panTro4.chr4 190319887 325 + 193495092 GTCTTCGTTCATTGCACTGATAACAAGTGTAatttctttattgtctgtgttct---ctagttt---ataagtttcagacag-gggagttaggtctaccttctt-cttct-tgttcccctcttctagcacatatgtacgtggcacatagtaAATCTTTC--------------------------------------------------CTATATTTGGAACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGTCTTAGTTCTTGACTCTTCAAAACTCTTGTTAGTTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTCTGCAAATCCTTGGAAAGGACTAAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195286073 371 + 198332218 gtcttccttcattgcactgatcacaagtgtaatttctttattgtctgtgttct---ctagttt---gtaagtttcagacag-gggagttaggtctaccttcttccttct-tgttcccctcttctagcacatatgtacatggcacatagtaaatccttcattatttgttgaTC----AGTTGCCTAACAGGAGCATGGAAGTAAATGAATTATATTTGGAACATTTCATCCTGAAGATA-CCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGTCTTAGTTCTTGACTCTTCAAAACTCTTGTTAGTTTTGACTCAATTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTCTGCAAATCCTTGGAAAGGACTAAT i ponAbe2.chr4 T 7988 C 0 s nomLeu3.chr7b 111257170 372 + 115148730 GCCTTCCTTTATTGCACTGATCACAAGTGTAatttctttattgtctgtgttct---ctagttt---gtgagtttcagacag-gcgagttaggtctacctccctccttct-tgttcccctcttctagcacatatgtacgtggcacatagtaaatccttcattatttgttgaTC----AGTTGCCTAACAGGAGCATGGAAGTAAATTAATTATATTTGGAACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGTCATAGTTCTTGACTCTTCAAAACTCTTGTTAGTTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTCTGCAAATCCTTGGAAAGGACTAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181059700 372 + 184069350 gtcctccttcattgcactgatcacaggtgtaatttctttattgtctgtgttct---ctagttt---gtaagtttcagacag-gggagttaggtctaccttgttccttct-tgttcccctcttctagcacatatgtacgtggcacatagtaaatccttcattatttgttgaTC----AGTTGCCTAACAGGAGCATGGAAGTAAATGAATTATATTTGGGACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGCCTTAGTGCTCGACTCTTGAAAACTCTTGTTAATTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTGTGCAAATCCTTGGAAAGGACTAAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397280 372 + 189454096 gtcctccctcattgcactgatcacaggtgtaatttctttattgtctgtgttct---ctagttt---gtaagtttcagacag-gggagttaggtctaccttgttccttct-tgttcccctcttctagcacatatgtacgtggcacatagtaaatccttcattatttgttgaTC----AGTTGCCTAACAGGAGCATGGAAGTAAATGAATTATATTTGGGACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGCCTTAGTGCTCGACTCTTGAAAACTCTTGTTAATTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTGTGCAAATCCTTGGAAAGGACTAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176012564 372 + 178775436 GTCCTCCTTCATTGCACTGATCACAGGTGCAATTTCTTTATTGTCTGTGTTCT---CTAGTTT---GTAAGTTTCAGACAG-GGGAGTTAGGTCTACCTTGCTCCTTCT-TGTTTCCCTCTTCTAGCACATATGTACGTGGCACATAGTAAATCCTTCATTATTTGTTGATC----AGTTGCCTAACAGGAGCATGGaagtaaatgaattatatttGGGACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGCCTTAGTGCTTGACTCTTGAAAACTCTTGTTAATTTTGGCTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTGTGCAAATCCTTGGAAAGGACTAAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132855663 372 + 135778131 GTCCTCCTTCATTGCACTGATCACAGGTGTAatttctttattgtctgtgttct---ctagttt---gtaaatttcagacag-gggagttaggtctaccttgttccttct-tgttcccctcttctagcacatatgtacgtggcacgtagtaaatccttcattatttgttgaTC----AGTTGCCTAACAGGAGCACGGAAGTAAATGAATTATATTTGGGACATTTCATCCTGAAGATACCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGCCTTAGTGCTTGACTCTTGAAAACTCTTGTTAATTTTGACTCAGTTCCAAGATTCTGCATCTGGTTTGTGATTGTCCTGTGCAAATCCTTGGAAAGGACTAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188239665 368 - 190850796 GTCCTCCTTCACTGCACTGATCACGCATGGAATTCCTTTATTGTCTGTGTTCT---CTAGTTT---GTAAGTTTCAGCCGG-CGGAGTTAGGTCTACCCTGTTCCTTCT-TGCTCTCCTCTCCTGACAC--GTGTATGTGGCACATAACAAACCCTTCCTTATTTGTTGATC----GATTGGCAAACAGGAGCATGGAATTAAATGAATTATATAGGCAACATTTTGTCCTGAAGATAGCCACCCAGAGGAGAAGGCAGGGTAAA--------ATTCTAG---TCAGCTCAGTCTTGGTTCTGGACTCCTCAAAACTCTTGTTAGTTTTGACTCGGTTCCAAGATTCTGCCTCTGGTT--TGATTGTCCTCTGCAAATCCTTGGGAAGGACTAAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84722891 332 - 129401213 ------GTTAAGCACACTGGCA-------------CTTCTCTCTCTGTTTTCC---CTGCTGTTGCAAAAGTTTCAGAAGG-GAGGGCAAAGCCTTCCTTATT-------------CCTAACCTGGAATATGTGTACGTAACACATACTAGTTCC-TCATGGGTTCTTAGAC----AACTGGCAAGTAGAAACAAAGGAGTA--------ATATATGAAAATTTTTGTTCTGAAGATATCTAT-----GGGGAATAAATGGTGAA--------CTTGTAGATATCAATCCGGTCCCATTTTTCAACTCCAAAGGAC-ATTGATGGTTGCAACTCAGTTCTAGGATTCTGTGTCTAGTCCATGATTGTTCCTCACAAATGCTTGTGAAGGACTAGT i mm10.chr8 C 0 I 407 s canFam3.chr16 15730465 383 - 59632846 GTGCTCCTTCACTGTGCTTATAacatatataattt-tttattgtttgtcctctgcactaatat---tt--gtttcagaggacaggaattgggtcaactctgttgtttttgtgttcctgtcatgtactaaatgtgttcttgacacgtagtatgtccttcattatttattgattgataaatAGGCAAATAGGACCATGGAGGCAAATGAATTATATTCAGAA-ATTACATCCTGAAGATATCCCCAGAGAATACAAGGCAGAGAGAAGCGTACATATTGTAG---TTAACTCTGTCTCATTTCTTGACTCCTTAATGCTCCTGCTAGCCTTGACTCAGTTCCAACTTTCTATGTCTGGCTTGTGATTGTCCACTGCTAGT--TTGGAAAGGATTAAT i canFam3.chr16 C 0 C 0 a score=382277.000000 s hg38.chr4_KI270785v1_alt 53189 99 + 119912 CCTCGTGTAGAATAGACTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAGAGTTT s panTro4.chr4 190320212 99 + 193495092 CCTCGTGTAGAATAGACTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAGAGTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195286444 98 + 198332218 CCTCGTGTAGAATAGACTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC--ATCTTTTC----AAAAGAGTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111257542 99 + 115148730 CCTCGTGTAGAATAGACTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAGAGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060072 99 + 184069350 CCTCGTGTAGAATAGATTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAGAGTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397652 99 + 189454096 CCTCGTGTAGAATAGATTTTCCATAAATATTTATTATGTAGATTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAGAGTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176012936 99 + 178775436 CCTCGTGTAGAATagattttccataaatatttattatgtggaTTTTGCTCATTGTTGACTGATCTGGGGGTCTTGGCTGC-AGTCTTTTC----AAAAGAGTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856035 99 + 135778131 CCTCGTGTAGAATAGATTTTCCATAAATATTTATTATGTGGATTTTGCTCATTGTTGACTGATCTGGGGATCTTGGCTGC-AATCTTTTC----AAAAGAGTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240033 99 - 190850796 CCTTGTGTAGAACAGACTTTCCCTAAATATTTATTATGTGGATTTTGCTCATAGTTGACTGGTCTGGGGGTCTTGGCTGC-AATCTTTTC----AAAAAGATTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84723630 89 - 129401213 CTTTGCGTGTAATATTCTTTCCATAAATATTTGTTA---GGATATTACACATTTTTCACTGA--------TCATGGCTATGAATTGTTTT----ACTTCAATTT i mm10.chr8 I 407 C 0 s canFam3.chr16 15730848 102 - 59632846 GCTTGTGTTCAACCGACTTTCCATAAATATTTATT-TTCAGATATTGTTTATTGTTGACTGATCTGACAGTCTTGGCCAC-AGTCtttttttaaaaaagatttt i canFam3.chr16 C 0 I 212 a score=209865.000000 s hg38.chr4_KI270785v1_alt 53288 60 + 119912 GGTGTGA----ATCTAGTTGAC--TGGAATCTGGGG-TTA-CCCTGGGCAGACGTTAAGCCTATAATT s panTro4.chr4 190320311 60 + 193495092 GGTGTGA----ATCTAGTTGAC--TGGAATCTGGGG-TTA-CCCTGGGCAGACGTGAAGCCTATAATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195286542 60 + 198332218 GGTGTGA----ATCTAGTTGAC--TGGAATCTGGGG-TTA-CCCTGGGCAGCGGTTAAACCTATAATT i ponAbe2.chr4 C 0 I 8460 s nomLeu3.chr7b 111257641 64 + 115148730 GGTGTGAATCTATCTAGTTGAC--TGGAATCTGGGG-TTA-CCCTGGGCAGATGTTAAGCCTATAACT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060171 62 + 184069350 GGTGTGA----ATCTAGTTGACTGTGGAATCTGGGG-TTA-CCGTGGGCAGATGTTAAGCCTATAATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397751 62 + 189454096 GGTGTGA----ATCTAGTTGACTGTGGAATCTGGGG-TTA-CCGTGGGCAGATGTTAAGCCTATAATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013035 62 + 178775436 GGTGTGA----ATCTAGTTGACTGTGGAATCTGGGG-TTA-CTGTGGGCAGATGTTAAGCCTATAATT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856134 62 + 135778131 GGTGTGA----ATCTAGTTGACTGTGGAATCTGGGG-TTA-ATGTGGGCAGATGTTAAGCCTATAATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240132 63 - 190850796 GGAGAGA----ATCTAGTTGACTGTGGAATCTGGGG-TTGCCCCCGGGCAGGTGTTAAGCCTAGAATG i calJac3.chr3 C 0 C 0 s mm10.chr8 84723719 63 - 129401213 GGCATAA----ATCTAATTAATTACGAAACCTAGAGCTTT-CCCCAAGAATGTGTTCAGCCTAGAATT i mm10.chr8 C 0 C 0 s canFam3.chr16 15731162 62 - 59632846 GGCATGG----ATTTAACTGATTATGGAATCTGGAG-TTA-TCTTGAGCAGCTGCTAAATCTAGAATT i canFam3.chr16 I 212 C 0 a score=32921.000000 s hg38.chr4_KI270785v1_alt 53348 20 + 119912 GGTTTTAACAGAAatatata s panTro4.chr4 190320371 20 + 193495092 GGTTTTAACAGAAatatata i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257705 19 + 115148730 GGTTTTAACAGAAatatat- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060233 20 + 184069350 GGTTTTAACAGAAatatata i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397813 20 + 189454096 GGTTTTAACAGAAATATATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013097 20 + 178775436 GGTtttaacagaaatatata i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856196 20 + 135778131 GGTTTTAACAGAAATACATA i chlSab2.chr7 C 0 I 16 s calJac3.chr3 188240195 18 - 190850796 GGTTTTAACacatatacg-- i calJac3.chr3 C 0 C 0 s mm10.chr8 84723782 12 - 129401213 GGTATTTTTATG-------- i mm10.chr8 C 0 I 1 s canFam3.chr16 15731224 12 - 59632846 GGTTGTAATGTA-------- i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195286602 8460 + 198332218 I a score=-2660.000000 s hg38.chr4_KI270785v1_alt 53368 4 + 119912 tat-------a s panTro4.chr4 190320391 11 + 193495092 tatatatataa i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257724 1 + 115148730 ----------a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060253 4 + 184069350 tat-------a i rheMac3.chr5 C 0 I 19 s calJac3.chr3 188240213 4 - 190850796 tat-------t i calJac3.chr3 C 0 C 0 s mm10.chr8 84723795 3 - 129401213 TTT-------- i mm10.chr8 I 1 C 0 s canFam3.chr16 15731236 4 - 59632846 TAT-------A i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e macFas5.chr5 186397833 0 + 189454096 C e ponAbe2.chr4 195286602 8460 + 198332218 I a score=3430.000000 s hg38.chr4_KI270785v1_alt 53372 7 + 119912 gcatata s panTro4.chr4 190320402 7 + 193495092 atatata i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257725 7 + 115148730 gcatata i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188240217 7 - 190850796 gcacaca i calJac3.chr3 C 0 C 0 s mm10.chr8 84723798 7 - 129401213 GCAGAGC i mm10.chr8 C 0 C 0 s canFam3.chr16 15731240 7 - 59632846 GTGTATA i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e macFas5.chr5 186397833 0 + 189454096 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=-1042.000000 s hg38.chr4_KI270785v1_alt 53379 23 + 119912 tatg-------gcatatatatgtatatata s panTro4.chr4 190320409 30 + 193495092 tataaatatatatatataaatatatatata i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257732 15 + 115148730 tata-------gcaaatatata-------- i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188240224 24 - 190850796 caca------cacatatatatatatataca i calJac3.chr3 C 0 C 0 s mm10.chr8 84723805 15 - 129401213 TGCT-------ATGTAGGTATT-------- i mm10.chr8 C 0 C 0 e canFam3.chr16 15731247 0 - 59632846 C e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e macFas5.chr5 186397833 0 + 189454096 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=3779.000000 s hg38.chr4_KI270785v1_alt 53402 26 + 119912 gctatatatatatatagcatatatat s panTro4.chr4 190320439 25 + 193495092 aatatatatatata-aatatatatat i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257747 23 + 115148730 ---gcgcatatatatagcatatatat i nomLeu3.chr7b C 0 C 0 s mm10.chr8 84723820 26 - 129401213 GTTATAGAATTGAAATGCATCCATAT i mm10.chr8 C 0 I 727 e canFam3.chr16 15731247 0 - 59632846 C e calJac3.chr3 188240248 0 - 190850796 C e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e macFas5.chr5 186397833 0 + 189454096 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=24052.000000 s hg38.chr4_KI270785v1_alt 53428 234 + 119912 g-------gcatatatatgtatatatagctatatatatat-agcatatatatg-------gcatatatatgtatatatagctatatatatata-tagcatatatatggcatatatatg---tatatataactatatatatatagcatatatatggcatatatatagcatatatatatagcatatatatggcatatatgtgtgtatat----atatatagctatatatacatatatgtgtatatatagc-atatatatg s panTro4.chr4 190320464 253 + 193495092 aaatatatatatataaatatatatataaatatatatatataaatatatatataaatatatatatataaatatatatataaatatatatatata--aatatatatatagcatatatatggcatatatatagc---atatatatgccatatatatagcatatatatatggcatatatatagcatatatatggcatatatgtgtgtatatatacatatatagctatatatacatatatgtgtatatatagctatatatatg i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257770 222 + 115148730 g----tgtgtatatatacatatgtatg-----ctatatattagcatatatgt--------gtatgctaatatatatgctaatatgtgtgtatgctaatatatatgt-gtatgctaata---tatatatta----acatatatagc-tatatatagcatatatataattagcat-----gtatatatctaatatatatgctaatatatata-aaatatcgc---atatacatatatatgaatatgctat-atatatgtg i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15731247 0 - 59632846 C e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e macFas5.chr5 186397833 0 + 189454096 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=1710.000000 s hg38.chr4_KI270785v1_alt 53662 10 + 119912 tatatatagc- s panTro4.chr4 190320717 9 + 193495092 tatatat-gc- i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111257992 10 + 115148730 tatatatagc- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186397833 10 + 189454096 TATATAt-gtg i macFas5.chr5 C 0 C 0 e canFam3.chr16 15731247 0 - 59632846 C e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e chlSab2.chr7 132856216 16 + 135778131 I e papAnu2.chr5 176013117 0 + 178775436 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=3042.000000 s hg38.chr4_KI270785v1_alt 53672 6 + 119912 tatata s panTro4.chr4 190320726 6 + 193495092 tatata i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258002 5 + 115148730 -atata i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186397843 6 + 189454096 tgtgtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013117 6 + 178775436 tatgtg i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15731247 0 - 59632846 C e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e chlSab2.chr7 132856216 16 + 135778131 I e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=8733.000000 s hg38.chr4_KI270785v1_alt 53678 9 + 119912 tgtgtatat s panTro4.chr4 190320732 9 + 193495092 tgtgtatat i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258007 9 + 115148730 gatgtatat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186397849 9 + 189454096 tgtgtgtgt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013123 9 + 178775436 tgtgtgtgt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856232 9 + 135778131 tgtgtgtgt i chlSab2.chr7 I 16 C 0 e canFam3.chr16 15731247 0 - 59632846 C e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=1879.000000 s hg38.chr4_KI270785v1_alt 53687 2 + 119912 ac s panTro4.chr4 190320741 2 + 193495092 at i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258016 2 + 115148730 at i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186397858 2 + 189454096 gt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013132 2 + 178775436 gt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856241 2 + 135778131 at i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15731247 2 - 59632846 AT i canFam3.chr16 C 0 C 0 e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e rheMac3.chr5 181060257 19 + 184069350 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=4494.000000 s hg38.chr4_KI270785v1_alt 53689 2 + 119912 ag s panTro4.chr4 190320743 2 + 193495092 ag i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258018 2 + 115148730 ag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060276 2 + 184069350 ag i rheMac3.chr5 I 19 C 0 s macFas5.chr5 186397860 2 + 189454096 AG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013134 2 + 178775436 ag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856243 2 + 135778131 ag i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15731249 2 - 59632846 GG i canFam3.chr16 C 0 C 0 e mm10.chr8 84723846 727 - 129401213 I e calJac3.chr3 188240248 0 - 190850796 C e ponAbe2.chr4 195286602 8460 + 198332218 I a score=23931.000000 s hg38.chr4_KI270785v1_alt 53691 10 + 119912 catatatatg s panTro4.chr4 190320745 10 + 193495092 catatatatg i panTro4.chr4 C 0 I 146 s nomLeu3.chr7b 111258020 10 + 115148730 catatagatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060278 10 + 184069350 catatatatg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397862 10 + 189454096 Catatatatg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013136 10 + 178775436 catatatatg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856245 10 + 135778131 catatatatg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240248 10 - 190850796 catacgcata i calJac3.chr3 C 0 C 0 s canFam3.chr16 15731251 10 - 59632846 CATGTAATTG i canFam3.chr16 C 0 C 0 e mm10.chr8 84723846 727 - 129401213 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=153932.000000 s hg38.chr4_KI270785v1_alt 53701 82 + 119912 -------tatatatacgtatatatacagctatatatatatat----aGCTGGCATCCCTAGACGTGGCACAGTCTGTCTGAAACTAGAGCAAA s panTro4.chr4 190320901 78 + 193495092 -------tatatatatatatatata----tatatatatatat----GGCTGGCATCCCTAGACGTGGCACAGTCTGTCTGAAACTAGAGCAAA i panTro4.chr4 I 146 C 0 s nomLeu3.chr7b 111258030 77 + 115148730 -------tatatatata-gcatata----tatatatatatat----aGCTGGCATCCCTAGATATGACACAGTCTGACTGAAGCTAGAGCAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060288 81 + 184069350 -------tttatatagc-atatata----tacatatatatataAAAAATTGGCATCCCTAAATGGGCCACACTCTGTCTGAAGCTAGAGCAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397872 77 + 189454096 -------tatatatagt-atatata----tatatatatatat----aATTGGCATCCCTAAATGGGCCACACTCTGTCTGAAGCTAGAGCAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013146 81 + 178775436 -------tatatatatt-atatata----tacacatatatgtatataattggcATCCCTAAATGGGGCACACTCTGTCTGAAGCTAGAGCAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856255 79 + 135778131 -------tatatatatc-atatata----tacacatatatat--ataACTGGCATCCCTAAATGGGGCACACTCTGTCTGAAGCTAGAGCAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240258 73 - 190850796 -------cgtatat----acatata----taca-acatataT----AATTGGCATCCTTGGTCAAAGCACAGCCTGTCTGAAGCTACAGCAAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15731261 81 - 59632846 ATTCTAGCATATGT----ATATATA----TTTGTATATACAT----AATTGAAATCCATAGACTTGAGATAATCTGTCTGAAGCTGGAGCAAA i canFam3.chr16 C 0 I 455 e mm10.chr8 84723846 727 - 129401213 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=112104.000000 s hg38.chr4_KI270785v1_alt 53783 60 + 119912 GTTCCCTCCTCTGGCTACCCTAGGATGACATAGTCTTTCAAAGTAGGAATATGACAGTAT s panTro4.chr4 190320979 60 + 193495092 GTTCCCTCCTCTGGCTACCCTAGGATGACATAGTCTTTCAAAGTAGGAATATGACAGTAT i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258107 60 + 115148730 GTTCCCTCCTCTGGCTACTCCAGGGTGATATAGTCTTTCAAAGCAGGAATATGACAGTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060369 60 + 184069350 GTTCCCTCCTCTGGCTACCCTGGGATGGTACAGTCTTTCGAAGCAGGAATATGACAGTAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397949 36 + 189454096 GTTCCCTCTTCTGGCTACCCTGGGATGGT------------------------ACAGTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013227 60 + 178775436 GTTCCCTCCTCTGGCTACCCTGGGATGGTACAGTCTTTCAAAGCAGGAATATGacagtat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856334 60 + 135778131 CTTCCCGCCTCTGGCCACCCTGGGATGATATAGTCTTTCAAAGCAGGAATATGACAGTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240331 60 - 190850796 CCTCCCTCCTCTGGCTACCCTAGGATGGTCTCGTCTTTCGAAGCAGGTATATGAGAGTAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84723846 727 - 129401213 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=203548.000000 s hg38.chr4_KI270785v1_alt 53843 90 + 119912 TATATAAATATAACATATTTATTAGCAGTAAGGACTGTAACTTTTCTATATTGCCTACAAAGTTCAATTGAGTGATTATTCCCACGGATC s panTro4.chr4 190321039 90 + 193495092 TATATAAATATAACATATTTATTAGCAGTAAGGACTGTAACTTTTCTATATTGCCTACAAAGTTCAATTGAGTGATTATTCCCACTGATC i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111258167 85 + 115148730 TATATAAAT-----ATATTTATTAGCAGTAAGGACTGTAACTTTTCTATATTGCCTACAAAGTTCAATTGAGTGATTGTTCCCACTGATC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060429 90 + 184069350 TATATAAATATAACATATTTATTAGCAGTAAGGATTGTAACTTTTCTATATTGCCTACAAAGTTCAATCGAGTGATTACTCCCAGTGATC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186397985 90 + 189454096 TATATAAATATAACATATTTATTAGCAGTAAGGATTGTAACTTTTCTATATTGCCTACAAAGTTCAATCGAGTGATTACTCCCAGTGATC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013287 85 + 178775436 tatataaat-----atatttattaacagTAAGGATTGTAACTTTTCTATATTGCCTACAAAGTTCAATCGAGTGATTATTCCCAGTGatc i papAnu2.chr5 C 0 I 309 s chlSab2.chr7 132856394 90 + 135778131 TATATAAATATAACATATTTATTAGCAGTAAGGATTGTAACTTTTCTATATTGCCTACAAAGTTCAATCGAGTGATTATTCCCAGTGATC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240391 86 - 190850796 TCTTTAAATACAATATATTTATTAGCAGTAAGGATTGTGACTTTTCTATATTACCATCAAAGTTCAAC----TGATTATTACCACTGACC i calJac3.chr3 C 0 C 0 s mm10.chr8 84724573 87 - 129401213 TATATGATTATAATGTTTGTGTTCTTACTATAAAAAG--ACTTTCATATCTT-CATAGAAAGCTCAGTTGTGTGGTCATTGTCAGGGTTC i mm10.chr8 I 727 C 0 e canFam3.chr16 15731342 455 - 59632846 I e ponAbe2.chr4 195286602 8460 + 198332218 I a score=457779.000000 s hg38.chr4_KI270785v1_alt 53933 147 + 119912 TAGAGATATTTTTAAGGTATTATATAACAATATTGTTATTAGCTCTGACTATGCCATTA--TTTTTCTAGCTTCTAGGCTTCTGTGTTTAC----TGTTTTGTCTGAAATATTTTTCTCCTCTTCACCTCAACTCTTCCCCATCCCCACCCCC s panTro4.chr4 190321129 147 + 193495092 TAGAGATATTTTTAAGGTATTATATAACAATATTGTTATTAGCTCTGACTATGCCATTA--TTTTTCTAGCTTCTAGGCTTCTGTGTTTAC----TGTGTTGTCTGAAATATTTTTCTCCTCTTCACCTCAACTCTTCCCCATCCCCACCCCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295062 147 + 198332218 TAGAGATATTTTTAAGGTATTATATGACAATATTGTTATTAGTTATGACTATGCCCTTA--TTTTTCTAGCTTCTAGGCTTCTGTGTTTAC----TGTTTTGTCTGAAGTATTTTTCTCCTCTTCACCTCAACTCTTCCCCATCCCCACCCCC i ponAbe2.chr4 I 8460 C 0 s nomLeu3.chr7b 111258252 146 + 115148730 TAGAGATATTTTTAAGGTATTATATAACAATATTGTTATTATTTCTGACTATGCCATTA--TTTTTCTAGCTTCTAGGCTTCTGTGTTTAC----TGTTTCATCTGAAATATTTTTCTCCTCTTCACCTCAACTC-TCCCCATCCCCACCACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060519 147 + 184069350 TAGAGATATTTTTAAGGTATTATATATCAATGTTGTTATTATTTCTGACTACGCCATTA--TTTTTCTAGCTTCTAGTCTTCTGTGTTCAC----TGTTTTGTCTGAAGTATTTTTCTCCTCTTCACCTCAACTCTTCCCCATTCCCACCCCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398075 147 + 189454096 TAGAGATATTTTTAAGGTATTATATATCAATGTTGTTATTATTTCTGACTACGCCATTA--TTTTTCTAGCTTCTAGTCTTCTGTGTTCAC----TGTTTTGTTTGAAGTATTTTTCTCCTCTTCACCTCAACTCTTCCCCATTCCCACCCCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013681 147 + 178775436 tagaGATATTTTTAAGGTATTATATATCgatgttgttattatttctgaCGATGCCATGA--TTTTTCTAGCTTCTAGTCTTCTGTGTTCAC----TGTTTTGTCTGAAgtatttttctcctcttcaccTCAACTCTTCCCCATTCCCACCCCC i papAnu2.chr5 I 309 C 0 s chlSab2.chr7 132856484 147 + 135778131 TAGAGATATTTTTAAGGTATTATATATCCATGCTGTTATTATTTCTGACTATGCCATTA--TTTTTCTAGCTTCTAGTCTTCTGTGTTCAC----TGTTTTGTCTGAGGTATTTTTCTCCTCTTCACCTCAACTCTTCCCCATTCCCACCCCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240477 148 - 190850796 TAGAGATA-TTTTAAGGTATTATATAACAGTATCGTTATTATTTCTGACTGTGCCGTTATTTTTTTTTAGCTTCCAGGCTTCTGTGTTTAA----AGTTTTGTCTAAGATATTTTTCTCCTCTTCACCTCAACCCTTCCCTATCCTGACCCCC i calJac3.chr3 C 0 C 0 s mm10.chr8 84724660 147 - 129401213 TAGGAATACTGTTAA-GTGTCACATAAGAAAA---TTATCATTCCTGATTGGATCATGA--GTTTTCTATCTTCCATGCTTGTGTGTCTACCCTGTGTTTTATTTGAAGACtctttctttctttcttcctttcttccttccttccttccttcc i mm10.chr8 C 0 I 616 e canFam3.chr16 15731342 455 - 59632846 I a score=437387.000000 s hg38.chr4_KI270785v1_alt 54080 174 + 119912 AT-AAAAAAACCCTGAGTTACATTCGTCTTCTCTAGGTTCCCATCCTATAAACCACCATTTACTTCCTCGTCATTATGTTTTGCACACACGTACTGCTGCCTGTCTGATTTCCTGCCTCCCTTCCTAGGCCATGCATAAACTGTGTGAGGGCGTGTACTACACCTGTCCTTTGTT s panTro4.chr4 190321276 174 + 193495092 AT-AAAATAACTCTGAGTTACATTCGTCTGCTATAGGTTCCCATCCTATAAACCACCATTTACTTCCTCATCATTATGTTTTGCACACACGTATTGCTGCCTGTCTGATTTCCTGCCTCCCTTTCTAGGCCATGCATAAGCTGTGTGAGGGCGTGTACTACACCTGTCCTTTGTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295209 175 + 198332218 ATAAAAAAAACCCTGAGTTACGTTCATCTGCTATAGGTTCCCATCCTATAAACCAACATTTACCTCCTCATCATTATGTTTTGCACACATGTATAGCTGCCTGTCTGATTTCCTGCCTCCCTTGCTAGGCCATGCATAAACTGTGTGAGGGCGTGTACTACACCTGTCCTTTGTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258398 175 + 115148730 ATTAAAAAAACCATGAGTTAGGCTCATCTGCTATAGGTTCCCCCCCTATAAACCACCATTTACTTCCTCATCCTTATGTTTTGCACACACGTATTGCTGCCTGTCTGATTTCCCGCCTCCCTTGCTAGGCCATGCATAAGCTGTGTGAGGCCATGTACTACACCTGTTCTTTGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060666 169 + 184069350 AT-TAAAAAACCATGAGTTAGTTTCATCTGCTGTATGTTCCCG-CCTATAAACCACCATTTACTTCCTCATCATTATGTTTTGCACACACGTATTGCTGCC----TGATTTCCTGCCTCCCTTGTGAGGCCATGCATAAGCTGTGTGAGGGCGCGTACTACACCTGTCCTTTGTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398222 169 + 189454096 AT-TAAAAAACCATGAGTTAGTTTCATCTGCTGTATGTTCCCG-CCTATAAACCACCATTTACTTCCTCATCATTATCTTTTGCACACACGTATTGCTGCC----TGATTTCCTGCCTCCCTTGTGAGGCCATGCATAAGCTGTGTGAGGGCGCGTACTACACCTGTCCTTTGTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013828 169 + 178775436 AT-TAACAAACCATGAGTTAGTTTCATCTGCTCTATGTTCCCG-CCTGTAAACCACCATTTACTTCCTCATCATTATGTTTTGCACACACGTATTGCTGCC----TGATTTCCTGCCTCCCTTGTGAGGCCATGCATACGCTGTGTGAGGGCGCGTACTACACCTGTCCTTTGTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856631 168 + 135778131 AT-TAAAAAACCATGAGTTAGTTTCATCTGCTATATGTTCCCG-CCTATAAACCACCATTTACTTCCTCATCATTATGTTTTGCACACACGTATGGCTGCC-----GATTTCCTGCCTCCCTTGCGAGGCCGTGCATAAGCTGTGTGAGGGCGCGTGCTACACCTGTCCTTTGCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188240625 170 - 190850796 GC--AAAAATCCAGGCGTTAGAATCTTCCGCGATGGGTTCCCCTCCTATCAAGTACCATTTACGTC--CGTCATTATGTTTTGCCCACGCGTACTGCTGCCTGTCCGACTTCCTGTCTCCCTTGCTAGGCCATGCATGAGCTGTGTG-GGGCGCGTCCTGCACCTGTCCTTTGTT i calJac3.chr3 C 0 I 533 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I a score=7615.000000 s hg38.chr4_KI270785v1_alt 54254 4 + 119912 CCGA s panTro4.chr4 190321450 4 + 193495092 CCGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295384 4 + 198332218 CCTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258573 4 + 115148730 CCCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060835 4 + 184069350 CCCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398391 4 + 189454096 CCCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176013997 4 + 178775436 CCCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856799 4 + 135778131 CCCA i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I e calJac3.chr3 188240795 533 - 190850796 I a score=353120.000000 s hg38.chr4_KI270785v1_alt 54258 132 + 119912 GTACTGCTGCCATTTCTGCCATATAGTTGACAACATCTCTTTATTGGATGAAAA--------ATGAATGAGTGCGTGAACATGTGGCCTAAACAGAGAATGTTTCCGTGTGAAGTTTCTGTACCAGCCAACTATCTTCTT s panTro4.chr4 190321454 132 + 193495092 GTACTGGTGCCATTTCTGCCATATAGTTGACAACATCTCTTTATTGGATGAAAA--------ATGAATGAGTGCGTGAACATGTGGCCTAAACAGAGAATGTTTCCGTGTGAAGTTTCTGTACCAGCCAACTATCttctt i panTro4.chr4 C 0 I 259 s ponAbe2.chr4 195295388 131 + 198332218 GTACTGGTGCCATTTCTGCGATATAGTTGACAACATCTCTTTATTGGATGAAAA--------ATGAATGAGCACATGAACATGTGGCCT-AACAGAGAATGTTTCTGTGTGAAGTTTCTGTACCAGCCAACTATCTTCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258577 132 + 115148730 GTACTGGCGCCATTCCTGCCATATGCTTGACAACATCTCTTTATtggatgaaaa--------atgaatgaatgcatgaaCATGTGGCCTAAACAGAGAATGTTTCTGTGTGAAGTTTCTGTACCAGCTAACTATCTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060839 132 + 184069350 GTGCTGGCACCATTCCTGCCATATGCTTGACAACATCTCTTTATTGGATGAAAA--------ATGAATGAATGCATGAACATGTGGCCGAAACAGAGCATGTTTCTGTGTGAAGTTTCTGTACCAGCTACAGATCTTCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398395 132 + 189454096 GTGCTGGCACCATTCCTGCCATATGCTTGACAACATCTCTTTATtggatgaaaa--------atgaatgaatgcatgaaCATGTGGCCGAAACAGAGCATGTTTCTGTGTGAAGTTTCTGTACCAGCTACAGATCTTCTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176014001 129 + 178775436 GTGCTGGCACCATTCCTGCCATATGCTTGACAACATCTCTTTATTGGATgaaaa-----------aatgaatgcatgaacaTGTGGCCTAAACAGAGCATGTTTCTGTGTGAAGTTTCTGTACCAGCTACAGATCTTCTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856803 131 + 135778131 GTGCTGGCACCATTCCTGCCAGACGCTTGACAACATCTCTTTCTTGGGTGAAAA--------ATGAATGAATGCATGAACATGTGGCCTAAACAGAGCAT-TTTCTGTGTGAAGTTTCTGTGCCAGCTATGGATCTTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241328 140 - 190850796 GTGCTGGCACCATTCCTGCCATGTGGTTGAGGACATCTCTTTACtggatgaagaatgaatgaatgaatgaatgaatgaaCATGTGTCCTGAGCAGACACTGTTTCTGTGTTAAGTTTCTGAACCAGCTAAGGATCTTCTT i calJac3.chr3 I 533 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I a score=5096.000000 s hg38.chr4_KI270785v1_alt 54390 2 + 119912 AA s ponAbe2.chr4 195295519 2 + 198332218 AA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258709 2 + 115148730 AA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060971 2 + 184069350 AA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398527 2 + 189454096 AA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176014130 2 + 178775436 AA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856934 2 + 135778131 AA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241468 2 - 190850796 AA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I e panTro4.chr4 190321586 259 + 193495092 I a score=247042.000000 s hg38.chr4_KI270785v1_alt 54392 92 + 119912 CAGCTTGGTAGAGTTGGGAAAGGGGCAATAGGAGAAATGCTGTCCCTGTTTCAGCTTCTGGGCCAGACCCTACGACTGACC---CCATTGCTGCA s panTro4.chr4 190321845 92 + 193495092 cAGCTTGGTAGAGTTGGGAAAGGGGCAATAGGAGAAATGCTGTCCCTGTTTCAGCTTCTGGGCCAGACCCTACGACTGACC---CCATTGCTGCA i panTro4.chr4 I 259 C 0 s ponAbe2.chr4 195295521 92 + 198332218 CAGCTTGGTAGAGTTGGGAAAGGGGCAATAGGAGAAATGCTGTCCCTGTTTCAGCTTCTGGGCCAGACCCTACGACTGACC---CCATTGCTGCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258711 95 + 115148730 CAGCTTGGTAGAGTTGGGAAAGGGGCAGTAGGAGAAATGCTGTCCCTGTTTCAGCTTCTGGTCCAGACCCTGCAACTGACCATTCACTTGCTGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181060973 95 + 184069350 CAGCTTGGTAGAGTTGGGAAAGGGGCAGTAGGAGAAATCCCGTCCTTGTCTCAGCTTCTGGGCCAGACCCTGCGACTGGCCATTCACTTGCTGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398529 95 + 189454096 CAGCTTGGTAGAGTTGGGAAAGGGGCAGTAGGAGAAATCCCGTCCTTGTCTCAGCTTCTGGGCCAGACCCTGCGACTGGCCATTCACTTGCTGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176014132 95 + 178775436 CAGCTTGGTAGAGTTGGGAAAGGGGCAATAGGAGAAATCCCGTCCTTGTCTCAGCTTCTGGGCCAGACCCTGCGACTGACCATTCACTTGCTGCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132856936 95 + 135778131 CAGCTTGGCAGAGTTGGGAAAGGGGCACTAGGAGAAATCCCGTCCTTGTCTCAGCTTCTGGGCCAGACCCTGTGACTGGCCATTCACTTGCTGCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241470 86 - 190850796 CAGCTTGGTGGAGCTGGGAAAGGGGCACTAGGGAAACGACTG-----GTTTCAGCCTCTGTGCTGGACGCTGTCCCTGAC----CGTTTGCTGCG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I a score=87366.000000 s hg38.chr4_KI270785v1_alt 54484 44 + 119912 ATGGCCCCATCACCCGTGCTGTGGGTTTGTGTCATAT-ACACAAG s panTro4.chr4 190321937 44 + 193495092 ATGGCCCCATCATCAGTGCTGTGGGTTTGTGTCATAT-ACACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295613 44 + 198332218 ATGGCCCCATCACCCATGCTGTGGGTTTGTGTCATAT-ATACAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258806 44 + 115148730 ATGGCCCCATCACCCATGCTGTGGGTTTGTGTCATAT-ACACAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181061068 44 + 184069350 ATGGCCCTATCACCCGCGCTGTGGGTTCATGTCACAT-ACACAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398624 44 + 189454096 ATGGCCCTATCACCCGCGCTGTGGGTTCATGTCACGT-ACACAAG i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132857031 45 + 135778131 ATGGCCCTATCACCCGTGCTGTGGGTTCATGTCACATAACACAAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241556 43 - 190850796 ATGCCCCAGTCACCAATGCTGTTGCTTTGTGTCACAT-AC-CAGG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84724807 616 - 129401213 I e papAnu2.chr5 176014227 0 + 178775436 C a score=62056.000000 s hg38.chr4_KI270785v1_alt 54528 23 + 119912 CCTTGTGAAA-ATACCACAGACCA s panTro4.chr4 190321981 23 + 193495092 CCTTGTGAAA-ATACCACAGACCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295657 23 + 198332218 CCTTGTGAAA-ATACCACAGACCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258850 23 + 115148730 CCTTGTGAAA-ATACCACAGACCA i nomLeu3.chr7b C 0 I 18 s rheMac3.chr5 181061112 23 + 184069350 CCTTGTAAAA-ATACCACAGACCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398668 23 + 189454096 CCTTGTAAAA-ATACCACAGACCA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132857076 23 + 135778131 CCTTGTAAAA-ATACCACAGACCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241599 23 - 190850796 CATTGTGGAA-ACAGCACAGACCA i calJac3.chr3 C 0 C 0 s mm10.chr8 84725423 24 - 129401213 CCTTGTAAAAGATATTACAGGCTG i mm10.chr8 I 616 C 0 e canFam3.chr16 15731342 455 - 59632846 I e papAnu2.chr5 176014227 0 + 178775436 C a score=24894.000000 s hg38.chr4_KI270785v1_alt 54551 11 + 119912 CTGTGAGGCCA s panTro4.chr4 190322004 11 + 193495092 CTGTGAGGCCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295680 11 + 198332218 CTGTGAGGCCA i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181061135 11 + 184069350 CCGTGAGGCCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398691 11 + 189454096 CCGTGAGGCCA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132857099 11 + 135778131 CCGTGAGGCCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241622 11 - 190850796 CTGCGAGGCCA i calJac3.chr3 C 0 C 0 s mm10.chr8 84725447 11 - 129401213 CTGGGAAGCCA i mm10.chr8 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e papAnu2.chr5 176014227 0 + 178775436 C e nomLeu3.chr7b 111258873 18 + 115148730 I a score=251629.000000 s hg38.chr4_KI270785v1_alt 54562 114 + 119912 TTCAACAAAGAACAGATG----GATTTCACCTTGAGTGTTGTTTTCCAAAGCACAC-------------GTGTTCCGGTGCC---ACTACGT--TTCCCTTGCCCATCATGTGAGCCTCCTCCCTCCATCGTGCTC s panTro4.chr4 190322015 114 + 193495092 TTCAACAAAGAACAGATG----GATTTCAGCTTGAGTGTTGTTTTCCAAAGCACAC-------------GTGTTTCGGTGCC---ACCACGT--TTCCCTTGCCCGTCATGTGAGCCTCCTCCCTCCATCGTGCTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295691 114 + 198332218 TTCAACAAAGAACAGATG----GATTTCAGCTTGAGTGTTGTTTTCCAAAGCACAC-------------GTGTCTCGGTGCC---ACCACGT--TTGCCTTGCCCATCATGGGAGCCTCCTCCCTCCATCGTGCTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111258891 114 + 115148730 TTCAACAAAGAACCGATG----GATTTCAGCTTGAGTGTTGTTTTCCAAAGCGTGC-------------ATGTCTCGTTGCC---ACCACAT--TTCCCTTGCCCACCACATGAGCCTCCTCCCTCCATCGTGCTC i nomLeu3.chr7b I 18 C 0 s rheMac3.chr5 181061146 114 + 184069350 TTCAACAAAGAACAGATG----GATTTCAGCTTGAGTGCTGTTTTCCAAAGCACAT-------------GTGTCTCGGTTCC---CCCATGC--TTCCCTTGCTCATCATGGGAGCCTCCTCCTTCCATCATGCTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398702 114 + 189454096 TTCAACAAAGAACAGATG----GATTTCAGCTTGAGTGCTGTTTTCCAAAGCACAT-------------GTGTCTCGGTGCC---CCCATGC--TTCCCTTGCTCATCATGGGAGCCTCCTCCTTCCATCATGCTC i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132857110 114 + 135778131 TTCAACAAAGAACAGATG----GATTTCAGCTTGAGTGCTGTTTTCCAAAGCACAT-------------GTGTCTCCGTTCC---CCCATGC--TTCCCTTGCTCATCATGTGAGCCTCCTCCCTCCATCGTGCTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241633 127 - 190850796 TTCAACAAAGAACAGATG----GACTTAGGCTTGAGTGTTGTTTCCCAAAGCGCGCGTGCAGGTGATTTGTGCCTCGGTGCC---ACCGTGT--TTCCCGTGCCCAGCCCGTGAGCCTCCTCCCTCCATCGTGGTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84725458 128 - 129401213 TGCAACAAAAAGCAGGTGGATTGATTTCAGCC---ATGTTGTTTTCCAGACTATAGATTTAGATAAA--TTATCTCACTGCCATGACCAAGTCATCTCATTGGCCATTGACCAAGTGTGGCCCCTCGATTCTG--- i mm10.chr8 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e papAnu2.chr5 176014227 0 + 178775436 C a score=544583.000000 s hg38.chr4_KI270785v1_alt 54676 180 + 119912 CTCTTTCTGCTTCCATCACATCAGGGGCCCTGAAGGCGACAGCACTGATTCCGTCCTCTTTGCTTGCCCAACACCTGGTCACAGATTTGGATGGAGGACAAATAAAGCATAATAGTGTTCTAAGAGCCTTTCCCC-TAGCTTGGCAGTCAGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG s panTro4.chr4 190322129 180 + 193495092 CTCTTTCTGCTTCCATCACATCAGGGGCCCTGAAGGCGACAGCACTGATTCCGTCCTCTTTGCCTGCCCAGCACCTGGTCACAGATTTGGATGGAGGACAAATAAAGCATAATAGTGTTCTAAGAGCCTTTCCCC-TAGCTTGGCAGTCAGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295805 181 + 198332218 CTCTTTCTGCTTCCATCACATCGGGGGCCCTGAAGGCGACAGCACTGATTCTTTCCTCTTTGCTTGCCCAGCACCTGGTCATGGATTTGGATGGAGGACAAATAAAGCATAATAGTGTTCTAAGAGCCTTTCCCC-TAGCTTGGCACTCAGCTTCTGACAAGATCGTCAGGTAGGTGG-GGGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111259005 180 + 115148730 CTCTTTCTGCTTCCATCACATCAGGGCCCCTGAAGGCGACAGCACTGATTCCTTCCTCTTTGCCTGCCCAGCACCTAGTCACGGATTTGGATGGAGAACAAATAAAGCATAATAGTGTTCTAAGAGCCTTTCCCC-TAGCTTCGCACTCAGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181061260 180 + 184069350 CTCTTTCTGCTTCCATCACATCAGGGCCACTGAAGACAACAGCACTGATTCCTTCCTCTTTGCCTGCCCAGCACCTGGTCACGGATTTGGATGGAGAACAAATGAAGCATAATAGTGAGCTAAGAGCCTTTCCCC-TGGTTTGACACTCTGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398816 180 + 189454096 CTCTTTCTGCTTCCATCACATCAGGGCCCCTGAAGACAACAGCACTGATTCCTTCCTCTTTGCCTGCCCAGCACCTGGTCACGGATTTGGATGGAGAACAAATGAAGCATAATAGTGAGCTAAGAGCCTTTCCCC-TGGTTTGACACTCTGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176014227 180 + 178775436 CTCTTTCTGCTTCCATCACATCAGGGCCCCTGAAGACAACAGCACTGATTCCTTCCTCTTTGCCTGCCCAGCACCTGGTCACGGATTTGGATGGAGAACAAATGAAGCATAATAGTGAGCTAAGAGCCTTTTCCC-TGGTTTGACACTCTGCTTCTGACAAGGTCATCAggtagg-gt-gggg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132857224 180 + 135778131 CTCTTTCTGCTTCCATCACATCAGGGCCCCTGAAGACAACAGCACTGATTCCTTCCTCTTTGCCTGCCCAGCACCTGGTATCGGATTTGGATGGAGAACAAATGAAGCATAACAGTGTGCTAAGAGCCTTTTCCC-TGGTTTGACACTCTGCTTCTGACAAGGTCATCAGGTAGG-GT-GGGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241760 177 - 190850796 CCCTTTCCGCTTCGGTCACATCAGGGCAACTGAAGGCGGCAGCCCCGATTCCTGCCTC--TGCCTGCTCAGCACCTGGTCACGGATTTGGAGGGAAAGCAAATGAAGCGTGA-AGTGTGCTAAGAGCCTTTTTCC--AGCTTGGCACTCTGCTTCTGACAAAGTCACCAGGTGGG-GTGGGGG i calJac3.chr3 C 0 C 0 s mm10.chr8 84725586 178 - 129401213 TTCTTTCTGCTTCAATCCCATGAGTGCAACCGATTGCAGCATCACC-AGGCCACCATCTTTATTATCTCAGCATTGGGCTGCACACTTGGGTACCGAGCAAGTGAAGCCTAGCAGTGT--TAGGAGCTCCTACCTGCAGCTCATCATCTTGTCTCTCACTAGACAGCAGGATAGG-CT-ATGG i mm10.chr8 C 0 I 1 e canFam3.chr16 15731342 455 - 59632846 I a score=1809935.000000 s hg38.chr4_KI270785v1_alt 54856 637 + 119912 AGGAGGGtgcaggggcaaaggagaagctcaccccttgcctttggagggtttgttg-aaaaaaaacatcaactcgcagtaaggcaaattaagaagaggaaaggcatacaaattca-ttcaccatgtgcttggggagaatcacagagtgattccctaatttcccaatggggcccacacacttacataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacgaccaaggaaacatgagtgggtacttga-----gagaaggaacggcagaggggaagaggcagagactgatttgtaaatggttgtctttggaagttcagtgaatctgagagatgggcattatcttgtaaaaagattgggtgagatctggttacattcttccgctcctttcctgaaatagatcatgagataacaggggaaaaggaaatattcttgaaagagaaaatgagataacaaggaaaaagcaattc-ttcttc-tggtgggtccctctggtcttcatgaagctagggaaaagtgtcttccaaggcctgttgttttctaagggttttaattaaaaatattcattatcccagggagccgtattttggggtgAAAAATCTCTTTCCTGAGGGGGCATA s panTro4.chr4 190322309 637 + 193495092 AGGAGGGtgcaggggcaaaggagaagctcaccccttgcctttggagggtttgttg-aaaaaaaaaatcaactcgcagtaaggcaaattaagaagaggaaaggcatacaaattca-ttcaccatgtgcttggggagaatcacagagtgattccctaatttcccaatggggctcacacacttacataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacgaccaaggaaacatgagtgggtacttga-----gagaaggaacggcagaggggaagaggcagagactgatttgtaaatggttctctttggaagttcagtgaatctgagagatgggcattatcttgtaaaaagattgggtgagatctggttacattcttccgctcctttcctgaaatagatcatgagataacaggggaaaaggaaatattcgtGAAAGAGAAAATGAGATAACAAGGAAAAAGCAATTC-TTCTTC-TGGTGGGTCCCTCTGGTCTTCATGAAGCTAGGGAaaagtgtcttccaaggcctgttgttttctaagggttttcattaaaaatattcattatcccagggagccatattttggggtgAAAAATCTCTTTCCTGAGGGGGCATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195295986 635 + 198332218 AGGAGGGtgcaggagcgaaggggaagctcgccccttgcctttggagggtttgttg-aaaaagaaaatcaacttgcagtaaggcaaattaagaagaggaaaggcatacaaattcattttaccatgtgcttggggagaatcacagagtgattccctaatttcccaatggggcccacacacttacataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacgaccaaggaaaaatgaatgggtacttga-----gagaaggaacagcagaggggaagaggcagagattgatttgtaaatggttctctttggaagttcagtgaatctgagagatgggcattatcttgtaaaaagattgggtgagatctggttacattcttccgctcctttcctgaaatagatcatgagataacaggggaaaaggaaataTTCTTGAAAGAGAAAATGAGATAACAAGGGAAAAGCAA----TTCTTC-TGGTGGGTCCCTCTGGTCTTCATGAAGCTAGGGAAAAGTGTCTTCCAAGGCCTGTTGTTTTCTAAGGGTTTTAATTAAAAGTACTCGTTATCCCAGGGAGCCGTATTCTGGGGTGAAAAATCTCTTTCCTGAGGGGGCATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111259185 636 + 115148730 AGAAGTGtgcaggggcgaacgggaagcacaccccttgcctttgaagggtttgttg-aaaaaaaa-atcaacttgcagtaaggcaaattaagaagaggaaaggcacacaaattcatttcaccatgtgcttggggagaatcacagagtgattccctaatttcccaatggggcccacacacttacataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgatgaccaaggaaaaatgaatgggtacttga-----gagaaggaatggcagaggggaagaggcagagattgatttgtaaatggttctttttgaaagttcagtgaatccgagagaagggcattatcttgtaaaaagattgggtgagatctggttacatttttctgttcctttcctgaaacagatcatgagataacaggggaaaaggaaataTTCTTGAAACAGAAAATGACATAACAAAGAAAAAGCAATTCTTTTTTC-TGGTGGGTCCCTCTGGTCTTCATGAAGCTAGGGAAAAGTGTCTTCCAAGGCCTGTTATTTTCTAAAGGTTTTAATTAAAAATATTCATTATCCCAGGGATCCGTATTTTGGGGTG-AAAATCTCTTT-GTGAGGGGGCATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181061440 635 + 184069350 AGGAGGGtgcaggggcgaaggcgaagctcaccccctgcctttggagggtttgttgaaaaaaaaaaatcaactcgccgtaaggcaaattaagaagaggaaaggtatacaaatgtattttcccatgtgcttggggagaatcacagagagattccctaatttcccaatggggcccacacacttatataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacaaccaaggaaaaatgaatgggtacttgagagaggagaaggaatggaagagggaaagaggcagagattgacttgtaaatggttctcttgggaagttcagtgaatct------taggcattatcttgtaaaaagattgggtgagatctgattacattcttcctctcctttcctgaaatagatcatgaaataacagggGAAAAGGAGATAttcttgaaacagaaaatgagataacaaggaaaaagcaattc-ttct---tggtgggtcCCTCTGGTCTTCATGAAGCTGGGGAaaagtgtcttccaaggcctatggttttctaagggttttaattcaaaatattcattatcccaggaagctgtattttggggtg-gAAATCTCTCTGCTTAGGGGACATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186398996 634 + 189454096 AGGAGGGtgcaggggcgaaggcgaagctcaccccttgcctttggagggtttgttg-aaaaagaaaatcaactcgccgtaaggcaaattaagaagaggaaaggtatacaaatgtattttcccatgtgcttggggagaatcacagagagattccctaatttcccaatggggcccacacacttatataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacaaccaaggaaaaatgaatgggtacttgagagaggagaaggaatggaagagggaaagaggcagagattgacttgtaaatggttctcttgggaagttcagtgaatct------taggcattatcttgtaaaaagattgggtgagatctgattacattcttcctctcctttcctgaaatagatcatgaaataacagggGAAAAGGAGATAttcttgaaacagaaaatgagataacaaggaaaaagcaattc-ttct---tggtgggtcCCTCTGGTCTTCATGAAGCTGGGGAaaagtgtcttccaaggcctatggttttctaagggttttaattcaaaatattcattatcccaggaagctgtattttggggtg-AAAATCTTTCTGCTTAGGGGACATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176014407 634 + 178775436 aggagggtgcaGGGGTGAAGGCGAAGCTCACCCCTTGCCTTTGGAGggtttgttg-aaaaaaaaaatcaactcgcCATAAGGCAAATTAAGAAGAGGAAAAGTATACAAATGTATTTTCCCATGTGCTTGGGGAGAATCACAGAGAGATTCCCTAATTTCCCAATGGGGCCCACACACTTATATAAACTCCTTtcagaggaaggggagagagagaatatagGTAATTCTGTTGAGGGGCATTCAATGACAACCAAGGAAAAATGAATGGGTACTTGAGAGAGGAGAAGGAATGGAAGAGGGGAAGAGGCAGAGATTGACTTGTAAATGGTTCTCTTGGGAAGTTCAGTGAATCT------TAGGCATTATCTTGTAAAAAGATTGGGTGAGATCTGATTacattcttcctctcctttcctgaaATAGATTATGAAATAACAGGGGAAAAGGAGATATTcttgaaacagaaaatgagataACAAGGAAAAAGCAATTC-TTCT---TGGTGGGTCCCTCTGGTCTTCATGAAGCTGGGGAAAAGTGTCTTCTAAGGCCTATGGTTTTCTAAGggttttaattcaaaatattcattatCCCAGGGAGCTATATTTTGGGGTG-AAAATCTCTCTGCTTAGGGGACATA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132857404 632 + 135778131 AGGAGGGtgcaggggcgaaggcgaagctcaccccttgcctttggagggtttgttg--aaaaaaaaatcaactcgccgtaaggcaaattaagaagaggaaaggtatacaaatgtattttcccatgtgcttggggagaatcacagagagactccctaatttcccaatggggcccacacacttatataaactcctttcagaggaaggggagagagagaatataggtaattctgttgaggggcattaaatgacaaccaaggaaaaatgaatgggtacttgagagaagagaaggaatggaagaggggaagaggcagagattgacttgtaaatggttctcttgggaagttcagtgaatct------tcggcattatcttgtaaaaagattgggtgagatctgattacattcttcctctcctttcctgaaatagatcatgaaataacagggGAAAAGGAGATACTCTTGAAACAGAAAATGAGATAACAAGGAAAAAGCAATTC-TTCT---TGGTGGGTCCCTCT-GTCTTCATGAAGCTGGGGAAAAGTGTCTTCCAAGGCCTATGGTTTTCTACGGGTTTTAATTCAAAATATTCATTATCCCAGGGAGCTGTATTTTGGGGTG-AAAATCTCTCTGCTTAGGGGACATA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188241937 630 - 190850796 AAGAGGGtgcaggggtgaaggggaagctcaccccctgcctttggagggtttgtcg-aaaaaaaaaattaactctcagtaagtcagattaagaagagaaaaggtatacacatttatttaaccatgtgcttggggagaatcacagagtaattccccaatttcccagtggggcccacacatatatataaa---ctttcacaggaaggg--gagagagaatacctgtaattctgctgaggggga-taaatggcaacaaaagaa--atgaatgggtatttga-----gagaatgaaaggaagaggggaagaggaagagattgacttgtaaatggctctctttggaagttcgttgaatctgagagacagccattaccttgcaaaaagattgggtgagttctggttacattcttcgtctcctttcctgaaatggatactgagataacatgggaaaaggaaATAttcttgaaagagaaaatgagataataaggaaaaagcagtta-ttcttcttggtgggtcCCTCTGATCTTCAGAAAGCTAGGGAGAAGTCTCTTCCAAGGCCTGTTGATTTCTAAGGGTTTTAATTCAAAATATTCATTATCCCAGGGAGCTGTGTTGTGGGGTA-AAAGTGTCTTTGCAGAGAGATCATA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84725764 1 - 129401213 I a score=473970.000000 s hg38.chr4_KI270785v1_alt 55493 162 + 119912 CTCTGCAAGAGGGTGGTTGAGTCTCCTGATGGCATC-------GTTCTCAGAATTTGGGATTGTATGCTCAGAACCTTTGATGCATGTTTTGTAGGTTGTATAAAAC--CACACATCTGTCCTTTCCAGA---CCGAAATATCGAGTTCTCCACAATGATCCTCTGTGACACAA s panTro4.chr4 190322946 162 + 193495092 CTCTGCAAGAGGGTGGTTGAGTCTCCTGATGGCATC-------GTTCTCAGAATTTGGGATTGTATGCTCAGAACCTTTGATGCATGTTTTGTAGGTTGTATAAAAC--CACACATCTGTCCTTTCCAGA---CCGAAATATCGAGTTCTCCACAATGATCCTCTGTGACACAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195296621 162 + 198332218 CTCTGCAAGAGGGTGGTTGAGTCTCCTGATGGCATC-------GTTCTCACAATTTGGGATTGTATGCTCAGAACCTTTGATGCATGTTTTGTAGGTTGTATAAAAC--CACACATCTGTCCTTTCCAGA---CCGAAATATCGAGTTCTCCACAGTGATCCTCTGTGACACAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111259821 162 + 115148730 CTCTGCAAGAGGGTGGTTGAGTCTCCTGATGGCGTC-------GTTCTCAGAATCTAGGATTGTATGCTCAGAACCTTTGATACACGTTTTGTAGGTTGTGTAAAAC--CACACATCTGTCCTTTCCAGA---CCGAAATATGCAGTTCTCCACAATGATCCTCTGTGACACAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181062075 147 + 184069350 -------------TGGTTGAGTCTCCTGATGGCATC-------GTTCTCAGAATTTAGGATTGTACGCTCAGAACTTTTGATACACGTTTTGTAGGTTGTATAAAAC----CACATCTGTCCTTTCCAGA---CCTAAACATTGAGTTCTCCACAATGATTCTCTGTGACACAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186399630 147 + 189454096 -------------TGGTTGAGTCTCCTGATGGCATC-------GTTCTCAGAATTTAGGATTGTACGCTCAGAACTTTTGATACACGTTTTGTAGGTTGTATAAAAC----CACATCTGTCCTTTCCAGA---CCTAAACATCGAGTTCTCCACAATGATTCTCTGTGACACAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176015041 147 + 178775436 -------------TGGTTGAGTCTCCTGATGGCATC-------GTTCTCAGAATTTAGGATTGTACGCTCAGAACTTTTGATACACGTTTTGTAGGTTGTATAAAAC----CACATCTGTCCTTTCCAGA---CCTAAACATCGAGTTCTCCACAATGATTCTCTGTGACACAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132858036 147 + 135778131 -------------TGGTTGAGTCTCCTGATGGCATC-------GCTCTCAGAATTTAGGATTGTACGCTCAGAACTTTTGATGCACGTTTTGTAGGTTGTATAAAAC----CACGTCTGTCCTTTCCAGA---CCTAAACATCGAGTTCTCCACAATGATTCTCTGTGACACAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188242567 169 - 190850796 CTCTGCAAGAGGGTAGTTGAGTCTCCTGCTGGCAGCTGGCATGTTTCTCAGAATGTAGGATTCTGTGTTTAGAACCTTTGATACACATTTTATAGGTTGTATGAAAC--CACACATCTGTTCTTTTCAGA---CCAAAATATCGAGTTCTCCACATTGATCCTCTGTGATACAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84725765 167 - 129401213 CTCAGGAGAGTGGTGGTTGATGGTCTTTATGGTATC-------TGCCTCAGGATTTAAGGCTGTGCTCTTGGAATCTTTAATGTATGTTTGACAGGTTGGAAAAAAAGTCCTAGATCCGGTCCCTCTTGGCATCTGAAATATTGAGCATTCCTTCTCAATTCCCTTTCCCACAA i mm10.chr8 I 1 I 341 e canFam3.chr16 15731342 455 - 59632846 I a score=2276131.000000 s hg38.chr4_KI270785v1_alt 55655 787 + 119912 GTTACATTTGCAATAGAAACCTATCT----TGTATATGAGAAATGCAATCCAGTATTGATTCGACACATCTGGGTTGAATTCCTGACTTGTCCACAGCCAGCGATATGCCCTTGGACAAGCTACTTTATCCCATTGAGACTCTGTTCTCACCTCTACGAGGAGAGtgtcagaggcatttggaccagagcgactccatcttgaataggggctgggtaaaatgatgctgagacctagtgggctgcattcccagga-gttaaggcgttcttagtcacaagatgagaca-taggtcagcataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccagccaatacccaccaaaaccaagatggtgaaagagtgacatctggtcctcttcactgctcattatacgctgattataaggcattagcatgctaagagacactcctgccagtgcc-atggcagtttacaaatgccatggcaaccaacgtcaggaagctaccctatgtggtct-aaaaaccggtctaaaaagggcaggagccctctgttct-ggggcaattgcccagccctttcccggaaaactcatgaataatccacccctcatttagcatatcatcaagaaatcgccataaaaatgcgtagccagcagtc----ctcagggctgccctgcttagggagtagccattcttttattccttgacctccttaaactttctttcactttatggactggccctgaaGTTATAATAAAATCA--CTGTTTCTTTTCACAACTGGAAGTTGAGATAAACC s panTro4.chr4 190323108 787 + 193495092 GTTACATTTGCAATAGAAACCTATCT----TGTATATGAGAAATGCAATCCAGTATTGATTCgacacatctgggttgaattcctgacttgtccacagccagcgatatgcccttggacaagctactttatcccattgagactctgttctcacctctacaaggagaGtgtcagaggcatttgaaccagagcgactccatcttgaataggggctgggtaaaatgatgctgagacctagtgggctgcattcccagga-gttaaggcgatcttagtcacaagatgagaca-taggtcagcataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccagccaatacccaccagaaccaagatggtgaaagagtgacctctgatcctcttcactgctcattatacgctaattataaggcattagcatgctaagagacactcctgccagtgcc-atggcagtttacaaatgccatggcaaccaacgtcaggaagctaccctatgtggtct-aaaaaccggtctaaaaagggcaggagccctctgttct-ggggcaattgcccagccctttcccggaaaactcatgaataatccacccctcatttagcatatcatcaagaaatcgccataaaaatgcgtagccagcagtc----ctcagggctgccctgcttagggagtagccattcttttattccctgacctccttaaactttctttcactttatggactggctctgaaGTTATAATAAAATCA--CTGTTTCTTTTCACAACTGGAAGTTGAGATAAACC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195296783 786 + 198332218 GTTACATTTGCAATAGAAACCTATCT----TGTATAT-AGAAATGCAATCCAGTATTGATTCgacacatctgggttgcattcctgacttgtccacagccagtgatatg-ccttggacaagttactttatcccattgagactctgttctcacctctacaaggagaCtgtcagaggcattggaaccagagcgactccatcttgaataggcgctgggtaaaacaatgctgagacctagtgggctgcattcccagga-gttcaggcattcttactcacaggatgagacaggaggtcagcataaaatacagctcataaagaccttgctgattaaacgggttgcagtaaagaagccagccaatacccaccaaaaccaagatggtgaacgagtggcctctggtcctcctcactgctcattatacgctaattataaggcattatcatgctaagagacactcctgccagtgcc-atggcagtttacaaatgccatggcaaccaacgtcaggaagctaccctatgtggtct-aaaaaccggtctaaaaagggcaggaggcctctgttcc-ggggcaattgcccacccctttcccggaaaactcatgaataatccacccttcatttagcatatcatcaagaaatcgccataaaaatgtgcagccagcagtc----ctcggggctgccctgcttagggagtagccattcttttattccttgacctccttaaacctcctttcacttcatggactggccctgaagttctAATAAAATCA--CGGTTTCTTTTTACAACTGGAAGTTGAGATAAACC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111259983 786 + 115148730 GTTACATTTGCAATAGAAACCTGTCT----TGTGTATGAGAAATGCAATCCAGTATTGATTCgacacatctgggttgaattcctgacttgtccacagccagcaatatgaccttggacaagttactttaccccattgagactctgttctcacctctacaaGGACAGtgtcagaggcatttgaaccagagcgactccatcttgaataggggctgggtaaaatgatgctgagacctagtgggctgcattcccaggaggttaaggcattctaagtcacaggatgagacatgaggtcagcataaaatagaggtcataaagaccttgctgataaaacagtttacagtaaagaagccagccaatacccaccaaaaccaagatggtga--gagtgacctctggtcctcttcactgctcattatacgctaattataaggtattagcatgctaagagacactcctgccactgcc-atggcagtttacaaatgccatggcaaccaacgtcaggaagctaccctatatggtct-aaaaaccggtctaaaac-agcaggagccctctgttcc-aggggaattgcccacccctttccccgaaaactcatgaataatccacccctcatttagcatatcatcaagaaatcaccataaaaatgcgcagcccgcagtc----ctcagggctgccctgcttagggagtagccattcttttactccttgacctccttaaacttcctttcactttatggacgggccctgaaGTTATAATAAAATCA--CTGTTTCTTTTCACAACTGGAAGTTGAGATAAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181062222 792 + 184069350 GTTACATTTGCAATAGAAAGCTATCT----GGTGTATGAGAAATGCAATCCAGTGTTTATTCgacacatctgggttgaattcctgacttgtcctccgccagcgatatgaccttggacaagttactttatcccattgagactccgttctcacctctacaaggagaGtgtcagaggcatttgaaccagagtgactccatcttgaatgggggctgggtaaaataatgctgagacctagtggactgcattcccaggaggctaaggcattcctagtcacaggatgagacacgaggtcagcataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccagccaatacccacctaaagggagatggtgagagagtggcctctggtcctcttcactgctcattatatgctaattataaggcattagcacgctaagagatactcctgccagtgctggtggcagtttacaaatgccatggcaaccaacatcaggaagataccctatatggtct-aaaaacccgtctaaaaagggcaggagccctctgtttc-gggggaattgcccacccctgtccaggaaaactcatgaataatacacccctcatctagcatataatcaagaaatcgccataaaaatgcgcagccagcagtc----ctcagggctgctctgcttagggagtagccattcttttattcgttgacctccttcaacttcctttcactttatggactggccctgaaGTTATAATAAAATCACTCTGTTTCTTTTCACAGCTGGAAGTTGAGATAACAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186399777 791 + 189454096 GTTACATTTGCAATAGAAAGCTATCT----TGTGTATGAGAAATGCAATCCAGTGTTTgttcgacacatctgggttgaattcctgacttgtcctcagccagtgatatgaccttggacaagttactttatcccattgagactccgttctcacctctacaaggagaGtgtcagaggcatttgaaccagagtgactccatcttgaatgggggctgggtaaaataatgctgagacctagtggactgcattcccaggaggctaaggcattcctagtcacaggatgagacatgaggtcagcataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccagccaatacccacctaaagggagatggtgagacagtggcctctggtcctcttcactgctcattatatgctaattataaggcattagcacgctaagagatactcctgccagtgctggtggcagtttacaaatgccatggcaaccaacatcaggaagataccctatatggtct-aaaaaccggtctaaaaagggcaggagccctctgtttc-gggggaattgcccacccc-gtccaggaaaactcatgaataatccacccctcatctagcatataagcaagaaatcgccataaaaatgcgcagccagcagtc----ctcagggctgctctgcttagggagtagccattcttttattcgttgacctccttcaacttcctttcactttatggactggacctgaaGTTATAATAAAGTCACTCTGTTTCTTTTCACAGCTGGAAGTTGAGATAACCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176015188 791 + 178775436 GTTACATTTGCAATAGAAAGCTATCT----TGTGTATGAGAAATGCAATCCAGTGTTTATTCAACACATCTGGGTTGAATTCCTGACTTGTCCTCAGCCAGCgatatgaccttggacaagttactttatCCCATTGAGACTCCGTTCTCACCTCTACAAGGGgagtgtcagaggcatttgaaccagagtgactccatcttgaatgggggctgggtaaaataatgCTGAGACCTAGtggactgcattcccaggaggttaaggcattcctagtcacaggatgagacacgAGGTCAGCataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccagccaataCCCACCTAAAGGGAGATGGTGAGAGAGTGGCCTCTGGTCCtcttcactgctcattatatgctaattataatgcattagcacgCTAAGAGATACTCCTGCCAGTGCTGGtggcagtttacaaatgccatggcaaccaACATCAGGAAgataccctatatggtct-aaaaaccGGTCTAAAAAGGGCAGGAGCCCTCTG-TTC-gggggaattgcccacccctgtccaggaaaactcatgaataatccacccctcatctagcatataatcaagaaatcgCCATAAAAATGCGCAGCCAGCAgtc----ctcagggctgctctgcttagggagtagccattcttttattcgtTGACCTCTTTCAACTtcctttcactttatggactggCCCTGAAGTTATAATAAAATCACTCTGTTTCTTTTCACAGCTGGAAGTTGAGATAACCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132858183 791 + 135778131 GTTACATTTGCAATAGAAAGCTATCT----TGTGTATGAGAAATGCAATCCAGTGTTTATTCgacacatctgggttgaattcctgacttgtcctcagccagcgatatgaccttggacaagttactttatcccattgagaccctgttctcacctctacaaggagaGtgtcagaggcatttgaaccagagcgactccatcttgaatgggggctgggtaaaataatgctgagacctagtgggccacattcccaggaggttaaggcattcctagtcacaggatgagaca-gaggtcagcataaaatacaggtcataaagaccttgctgataaaacaggttacagtaaagaagccggccaatacccaccaaaacggagatggtgagagagtggcctctggtcctcttcactgctcattatatgctaattataaggcattagcatgctaagagatactcctgccagtgctggtggcagtttacaaatgccatggcaaccaacatcaggaagataccctatatggtct-aaaaaccggtctaaaaagggcaggagccctctgtttc-gggggaattgcccacccctgtccaggaaaactcatgaataatccacccctcatctagcatataatcaagaaatcgccataaaaatgcgcagccagcagtc----ctcagggctgctctgcttagggagtagccattctttcattcgttgacctccttcaacttcctttcactttatggactggccctgaaGTTATAATAAAATCACTCTGTTTCTTTTCACAACTGGAAGTTGAGATAAACC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188242736 776 - 190850796 GTTACATTTGCAATGGAAACCTATCTATCCTGTGTATGAGAAATGCAATCCGGTATTGATTCTATACatctgggttgaattcctgacttgtccacagccagtgatacgaacttggacaagctacttcatcccactgagactctgttctcacctctacaaggagaatgtcagaggcatcggaaccagagtgactccatcttgaatagg-gctggg-gaaataatgctgaggcctagtgggctgcattcccaggaggttaaggcattcttggtcacaggatgggacatgaggtcagcacaacatacaggccatcaaaaccttgctgataaaacaggttacagtaaagaagccagccaaaacccaccaaaaccaagatggtgagagcgtgacctctggacctcttcactgctcattgtacactaattacaaggcattggaatgctcagaggcactcttgctgaggcc--------------------ctggtaaccagcctcaggaagctaccctatatggtctaaaaaaatggtttaaaaaggggaggaagcctcagttccaaagggaattgcccacccctttccccgaaaactcatgaataatccacccctcatttatcatataatcaagaaatcaccataaaaacgctcagccagcatcctcagctcagggctgctctgcctagggaacagccattctttcattccttgacctcctcaaacttgccttcacttcgtggactggccctgaagtcATGATAAAAT----CTGTTTCTTTTCACAACTGGAAACCCGGATAACTC i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84725932 341 - 129401213 I a score=610066.000000 s hg38.chr4_KI270785v1_alt 56442 200 + 119912 CGTAAGACCACATTTTAGTTCCCAGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATTGTATTATGGCAATTATGAATTATGAATATTTTGATAACATAATGCATGAATGCACGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTAAATGGAAGAGTTCTT s panTro4.chr4 190323895 200 + 193495092 CATAAGACCACATTTTAGTTCTCAGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATTGTATTATGGCAATTATGAATTATGAATATTTTGATAACATAATGCATGAATGCACGCTCTTGATACATACTTCAAACGATAAGGAATTTTGTAAAGTTAAATGGAAGAGTTCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195297569 200 + 198332218 TGTAAGACTACGCTTTAGCTCCCAGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGGCTTAACTTTTATAGTATTATGGCAATTATGAATTACGAATATTTTGATAACATAATGCATGAATGCACGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTAAATGGGAGAGTTCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111260769 200 + 115148730 TGTAAGACCACATTTTAGCTCCTGGGCTAGCATGTTGAGCCCTGTGAGTCTGAGTTCTGTTTTTCCCTCCAGTCTTAACTTTTATAGTATTATGGCAATTATGAATTATGAATATTTCAATAACATAATGCATGAATGCACGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTAAATGGGAGAGTTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181063014 200 + 184069350 TGTAAGACCACATTTTAACTCCTGGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATAGTATTATGGCAAGTATGAATTATGAATATTTTGATAACATAATGCATGAATGAACGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTATATGGGAGAGTTCTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186400568 200 + 189454096 TGTAAGACCACATTTTAACTCCTGGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATACTATTATGGCAAGTATGAATTATGAATATTTCGATAACATAATGCATGAATGAACGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTATATGGGAGAGTTCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176015979 200 + 178775436 TGTAAGACCACATTTTAACTCCTGGGCTAGCATCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATAGTATTATGGCAAGTATGAATTATGAATATTTCGATAACATAATGCATGAGTGAACGCTCTTGATACATACTTCAAACAGTAAGGAATTTTGTAAAGTTATATGGGAGAGTTCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132858974 200 + 135778131 TGTAAGACCACATTTTAACTCCTGGGCTAGCAGCTTGAGCCCTGTGAGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATAGTATTATGGCAAGTATGAATTATGAATATTTCGATAACATAATGCATGAATGAATGCTCTTGATACATACTTCAAACGGTAAGGAATTTTGTAAAGTTATATGGGAGAGTTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188243512 191 - 190850796 TGTCAGGCCACA-TTTAGCTCCT-GGCTGGCATCTTGAGCCCTGTGTGTCTGAGTTCTATTTTTCCCTCCAGTCTTAACTTTTATAGTACGATGGC-------AATTAGGAGTATTTGGGTAACGTAATGCATAAATGCACCCCCTTGATTCATGCCTCAAACGGTAGAGAATTTTGTAAAGTAAAATGGGAGCGTCCTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84726273 182 - 129401213 CATCAGACCTCATTTTAGCTACCGAGCTTGAGTCTTGAGCCAAGTGCATCCAAGTTTTGTG---------GGGAAAAACTTTTACAGAGCAGTGGC----ATTCATTTTTAA----TTGGCAATAGAAAACATACAGACATTCTTTCAACAAATAGTTTAGGCAGTTA-GAATTTCACAGATAATGATGGAGAAGTTCCT i mm10.chr8 I 341 I 346 e canFam3.chr16 15731342 455 - 59632846 I a score=1201754.000000 s hg38.chr4_KI270785v1_alt 56642 434 + 119912 CACTCAATATCCTTGGCCCAACAGACGTGCCTATGAACTCTGTGGCTTTtcctccctcgtcctgtttcacctccgctcctgctgttgcctccctcctcctccCTGGCTCCTAAGTCTTTGAGTAACTCAGCGGCCTTTTGGTGATTG-TTCCATTTAGGGGTAGATTCCTCAGAGAGGCCTTGTCCACCCAACGGGAGGAAGTCTGCCTGACCTTACTCCACGGTATTTTAAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGGATCATgactggccagggcggcttgcacctataatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagaccagcctgggaaacacagtgagaccccatctctaaaa-----------------aaagaaagaaGAAAAA---GAACTCTGTTGTAATTCTGT s panTro4.chr4 190324095 433 + 193495092 CACTCAATATCCTTGGCCCAACAGACCTGCCTGTGAACCCTGTGGCTTTTCCTCCCTCGTCCTGTTTCACCTCCGCTCCTGCCGTTGCCTCCCTTCTCCTCCCTGGCTCCTAAGTCTTTGAGTAACTCAGCGGCCTTTTGGTGATTG-TTCCATTTAGGGGTAGATTCCTCAGAGAGGCCTTGTCCACCCAACGGGAGGAAGTCTGCCCGACCTTACTCCACGGTATTTTAAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGGATCATgactggccagggtggctcgcacctataatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagaccagcctgggaaacacagtgagaccccatctctaaaa-----------------aaagaaagaa-aaAAA---GAACTCTGTTGTAATTCTGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195297769 435 + 198332218 CACTCAATATCCTTGGCCCAACAGACCTGCCTGGGAACTCTGTGGCTTTTCCTCCCTCCTCCTGTTTCATCTCCGCTCCTGCCATTGCCTGCTTTGTCCTGCCTGGCTCCTAAGTCTATGAGTAACTCAGCGGCCTTTTGGTGATTGTTTCCATTTAGGGGTAGATTCCTCAGAGAGGCCCTGTCCACCCAACGGGAGGAAGTCTGCCTGACCTTACTCCACAGTATTTTACACCAGAGTATGCTGTTTGCATCCTTACTAAAACTACGCAGGATCATgactggccagggtggctcgcacctgtaatcccggcactttgggaggctgaagcaggaggcttacttgagggcaggagtttgagaccagcctgggaaacacagtgagaccccatctctaaaa-----------------aaagaaaaaaGAAAAA---GAACTCTGTTGTAATTCTGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111260969 435 + 115148730 CACTCAATATCCTTGGCCCAACAGACCTGCCTGTGAACTCTGTGGCTTTTCCTGCCTGCTCCTGTTTCATTTCTGCTCCCGCCATCGCCTCCCTTCTCCTCCCTGTCTCCTGAGTCTTTGAGTAACTCAGCGGCCTTTTGGTGATTGTTTCCATTTAGGGGTAGATTCCTCAGAGAGGCCTTGTCCACCCAATGGGAGGAAGTCTGCCCGACCTTACTCCACAGTATTTTAAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGGATCATAACTggccagggtggctcacacctgtaaccccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagaccagcctgggaaacacggtgagaccccatctctaaaa-----------------aaagaaagaaGAAAAA---GAACTCTGTTGTAATTCTGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181063214 435 + 184069350 CACTCAATATCCTTGGCCCAACAGACCGGCCTGTGAACTCTGTGGTTTTTCCTCCCTGCTCCTGTTTCACCTCCACTCCCTCCATCGCCTCCCTTCTCCTCCCCGGCTCCTAAGTCTTTGAGTAATTCAGCGGCCTTTTGGTGATTGTTTCCATTTAGGGGTAGATTCCTCAGAGAGGCCTTGTCCACACAATGGGAGGAGGTCTGCCCGACCTTAGTCCACAGTATTTTCAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGGATCATgaccggccagggtggctcgcacctgtaatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagaccagcctgggaaacatggtgcgaccctatctctgaaa-----------------aaagaaagaaGAAAAA---GAACTCTGTTGTAATTCTCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186400768 435 + 189454096 CACTCAATATCCTTGGCCCAACAGACCGGCCTGTGAACTCTGTGGTTTTTCCTCCCTGCTCCTGTTTCACCTCCGCTCCCTCCATCGCCTCCCTTCTCCTCCCCGGCTCCTAAGTCTTTGAGTAATTCAGCGGCCTTTTGGTGATTGTTTCCATTTAGGGGTAGATTCCTCAGAGAGGCCTTGTCCACACAATGGGAGGAGGTCTGTCCGACCTTAGTCCACGGTATTTTCAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGAATCATgactggccagggtggctcgcacctgtaatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagaccagcctgggaaacacggtgcgaccctatctctgaaa-----------------gaagaaagaaGAAAAA---GAACTCTGTTGTAATTCTCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176016179 435 + 178775436 CACTCAATATCCTTGGCCCCACAGACCGGCCTGTGAACTCTGTGGTTTTtcctccctgctcctgtttcacctccgctccctccatcgcctcccttctcctccccggctcctAAGTCTTTGAGTAATTCAGCGGCCTTTTGGTGATTGTTTCCATTTAGGGGTAGAttcctcagagaggccttgtCCACGCAATGGGAGGAGGTCTGCCCGACCTTACTCCACGGTATTTTCAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTATGCAGGATCATGACCGgccagggtggctcacacctgtaatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggggtttgagaccagcctgggaaacacggtgcgaccctatctctaaaa-----------------aaagaaagaagaaaaa---gaactctGTTGTAATTctct i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132859174 435 + 135778131 CACTCAATATCCTTGGCCCAACAGACCGGCCTGTGAACTCTGTGGTTTTTCCTCCCTGCTCCTGTTTCACCTCTGCTCCCTCCATCCCCTCCCTTCTCCTCCCTGGCTCCTAAGTTTTTGAGTAATTCAGCGGCCTTTTGGTGATTGTTTCCACTTAGGGGTAGATTCCTCAGAGAGGCCTTTTCCACGCAATGGGAGGAGGTCTGCCCGACCTTACTCCACGGTATTTTCAACCAGAGTATGCTGTTTGCATCCTTACTAAAACTCTGCAGGATCATgaccggccagggtggctcgcacctgtaatcccagcactttgggaggctgaggcaggaggctcacttgaggccaggagtttgagactaacctgggaaacacggtgcgaccctatctctaaaa-----------------aaagaaagaaGAAAAA---GAACTCTGTTGTAATTCTCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188243703 370 - 190850796 CCCTCCCAATCCTTGGCCCAGCAGACCTGCCTGTGGACTCTGCGGCTTTTCCTCCACGCTCCTGTTTCAGCCCTGCTCC-ACCATCACCTCCC---TCCTCCCTGGCCCCAAAGTC--TGAGTAACTCAGCAATCTTGTCGTGATTGTTTCCATTTAGGGGTAGACTCATCAGA------------------------------------------------------------------ATACTGTTTGCATCCTTATTATACCTTCGCAGGATCATggccaggcagcgtggctcacacctgtaatcccagcact-------------gccggaggctcacttgaggccaggagtttgagaccagcctgggaaacacaatgagactctatctctaaaaaaaaaaaagaaaGAAAGAAAGAAAGAAGAAAAGTCTGAACTGTGTTGTAATTCTGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726455 346 - 129401213 I a score=291738.000000 s hg38.chr4_KI270785v1_alt 57076 87 + 119912 TTGTTTGCTTTGCTTCTTTCCACTGTCTGCCTTACATTCTTGCCTTCTGCATTGTAAGCATAAGAAGGCGGAGTGCAGGATATGCTT s panTro4.chr4 190324528 87 + 193495092 TTGTTTGCTTTGCTTCTTTCCactgtctgccttacattcttgccttctgcattgtaagcataagaaggcagagtgcaggatatgctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195298204 87 + 198332218 TTGTTTGCTTTGCTTCTTTCCGCTGTCTGCCTTACATTCTTGCCTTCTGCATTGGAAGCGTAAGAAGGCAGAGTGCAGGATATGCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111261404 87 + 115148730 TCGTTTGCTTTGCTTCTTTCCACTGTCTGCCTTACCTTCTTGCCTTCTGCATTGTAAGTGCAAGAAGGCGGAGTGCAGGATATGCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181063649 87 + 184069350 TTGTTTGCTTTGCTTCTTTCCACTGTCTGCCTTACCTTCTTGCCTTCTGCATTGTAAGCGCAGGAAAGCAGAGTGCAGGATATGTGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186401203 87 + 189454096 TTGTTTGCTTTGCTTCTTTCCACTGTCTGCCTTACCTTCTTGCCTTCTGCATTGTAAGCGCAGGAAAGCAGAGTGCAGGATATGCGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176016614 87 + 178775436 ttgtttgctttgcttcttTCCACTCTCTGCCTTACCTTCTTGCCTTCTGCATTGTAAGCGCAGGAAAGCAGAGTGCAGGATATGCGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132859609 87 + 135778131 TTGTTTGCTTTGCTTCTTCCCACTGTCTGCCTTACCTTCTTGCCTCCTGCATTGTAAGCTCAGGAAACCAGAGTGCAGGATATACGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188244073 85 - 190850796 TTGTTTGCTTTGCTTCCTTC--CTGTCTGCCTTACCTTCTTGCCTTCTGCGTCATAAGCACAGGAAAGCGGATTGCAGGGTGTGCTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84726801 87 - 129401213 TTGCTTGCTTGCCATCTTGTCAGCCTCTACCTTACATGCTTGCCCTCTGCATTGTAAGCTCACGAAGGCAGAGTAGGGaatatgctt i mm10.chr8 I 346 I 4242 e canFam3.chr16 15731342 455 - 59632846 I a score=4432367.000000 s hg38.chr4_KI270785v1_alt 57163 1510 + 119912 GTTCTATATACTGTTGTGGTCCTACTTTTCCTCATATTGCCTGAAGTAAATGTTGGTGGAAAAATTAatacacacacatacacagatgcatatacaaatacatTTTACTCAGTGCCCCGTGT--TATATA----TATAACTTTGTTTTGAACatagtaaatcttagagatcttcctatattgggacattc----agtgactgactagtattgcactgtgtggaaataccaataatttattaaatcttctcattgcaaatggacaaattaggttgtttccaattttttataatcataaagaatgaatcattgaccatctcagtcttgcccagaccttatctggccacccatgcaggtatttttgtaagataaattcctataagaggaatgattgagttgaagggatgacaca--attttgattttgagagataatctcgaattaactttaaaagttgatgtaccaaattacatgtgagccagctgcaattgtaagagttcttgttttg-taattctcaatatcagcagatattataaatcttcaagttttgtcaagttaaagggtaaaaatcctagctatatctcattgttctaatttgcatttatgattactaacaaagttaaatatt-ttaatgtgtttatagtc--gtgtacttttcctatgaattgcctttccttgtacattacctttttt-cattca--ttttttcttaatgattgcagaagcttta--------ACCTTTTGATGTTTATTATTTGTC-GTTATGTGCATTCCAAAGAATTTCTGCTGATCTGTTGTTTATGA-TTAACATTTTTGAATGGTATTCTTTCAAATGTAACTAAttttttaagagctttattgagatgtaattgatatatgaagaactgcactgta-------------------------------------------------------------------------------cttgaactcctgagctcaagtgatcc-cctgccttggcagctcgggtagctaggaatacatgtgcacactatgtcacccaggtcatttttaaa-ttttttgtacagatgggttcttcctgtgttgccaggctggtcttgaactcctggcctcaagcaatactcctgtctcagactcccaacactatgggattacaggtgtgagccagtgcacctggATCaactatgcatgtttaatgtatacaatttgataaatttgggcatatgaaaacacctgtgatattatcagcataatcaaagaaatagacactgtattagttcattttcacactgctgataaagacatacccgagtctgggcaatttacaaaagaaagaggtttaatggacttacagttccacagggctggggatgcctcacaatcatggtggaaggcaaggaggagcaagtcacatcttacatagatggtggcaggcaaagagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttattcactaccacaagaacagcatgggaaagacatgcccccatgattcagttacctccctctgggtccctcccagaacacgtaggaatccaagatgagatttgggtg s panTro4.chr4 190324615 1516 + 193495092 gttctatatactgttgtggccctacttttcctcatattgcctgaagtaaatgttGGTGGAAAGATTAatacacacacatacacagatgcatatacaaatacatTTTACTCAGTGCACTGTGT--TATATA----TATAACTTTGTTTTGAACATAGTAAAtcttagagatcttcctatattggaacattctctcagtgactgactagtattgcactgtgtggaaataccaataatttattaaatcttctcattgcaaatggacaaattaggttgtttccaattttttataatcataaagaatgaatcattgaccatctcagtcttgcccagaccttatctggccacccatgcaggtatttttgtaagataaattcctataagaggagtgattgagttgaagggatgacaca--tttttgattttgagagataatctcgaattaactttaaaaattgatgtaccaaattacatgtgagccagctgcaattgtaagagttcttgttttg-taattctcaatatcagcagatattataaatcttcaagttttgtcaagttaaagggtaaaaatcctagctatatctcattgttctaatttgcatttatgattactaacaaagttaaatatt-ttaatgtgtttatagtcatgtgtacttttcctatgaattgcctttccttatacattacctttttt-cattcg--ttttttcttaatgattgcagaagcttta--------ACCTTTTGATGTTTATTATTTGTC-ATTATGTGCATTCCAAAGAATTTCTGCTGATCTGTTGTTTATGA-TTAACATTTTTGAATGGTATTCTTTCAAATGTAACTAATTTTTTAAGAGCTTTATTGAGATGTAATTGATATATGAAGAACTGcactgta-------------------------------------------------------------------------------cttgaactcctgagctcaagtgatcc-cctgccttggcagctcgggtagctaggaatatatgtgcacactatgccacccaggtcatttttaaa-ttttttgtacagatgggatcttcctgtgttgccaggctggtcttgaactcctggcctcaagcgatactcctgtctcagactcccaacactatgggattacaggtgtgagccagtgcacctggATCaactatgcatgtttaatgtatacaatttgataaatttgggcatatgaaaacacctgtgatattatcatcataatcaaagtaatagacactgtattagttcattttcacactgctgataaagacatacctgagtctgggcaatttacaaaagaaagaggtttaatggacttacagttccacagggctggggatgcctcacaatcatggtggaaggcaaggaggagcaagtcacatcttacatagatggtggcaggcaaagagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttactcactaccacaagaacagcatgggaaagacatgcccccgtgattcagttacctgctactgggtccctcccagaacacgtaggaatccaagatgagatttgggtg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195298291 1529 + 198332218 GTTCTATTTACTGTTGTGGCCCTACTTTTCCTCATATTGCCTGAGGTAAATGTTGGTGGAAAAATTAATACACACACATACATAGATGCATACACAAATACATTTTACTCAGTGCACTGTGTTATATATA----TATAACTTTGTTTTGAACACAGTAAATCTTAGAGATCTTCCTATATTGGGACATTCTCTCagtgactgactagtattgcactgtgtggaaataccaataatttattaaatcttctcattgcaaatggacaaattaggttgtttccaattttttctaatcataaagaatgaatcattgaccatctcagtcttgcccagaccttatctgggcacccatgcaggtatttttgtaagataaattcctataagaggaatgattgagttgaagggatgacaca--tttttgattttgagagataatcttgaattaactttaaaaattgatgtaccaaattacatgtgagccaactgcaattgtaagagttcttgttttg-taattctcaatatcagcagatattataaatcttcaagttttgtcaagttaaaggataaaaatcctagctatatctcattgttctaatttgcatttatgattactaaaaaagttaaatatt-ttaatgtgtttatagtcatgtgtacttttcttatgaattgtctttccttgtacattacctttttt-cattcattttttttcttaatgattgcagaagctttAACCTTTTGACCTTTTGATGTTTACTATTTTTCTATTATGTACATTCCAAAGAATTTCTGCTGATCTGTTGTTTATGA-TTAACATTTTTGAATGGTATTCTTTCAAATGTAACTAAttttttaagagctttattgagatgtaattgatatatgaagaactgcactgta-------------------------------------------------------------------------------cttgaactcctgggctcaagtgatcc-cctgccttggcagctagggtagctaggaatataagtgcacactatgccactcaggtcatttttaag-ttttttgtatagatgggatcttcctgtgttgccaggctggtcttgaactcctggcctcaagtgatactcctgtctcagactcccaacactctaggattacaggtgtgagccactgcaccttgctCaactatgcatgtttaatgtatacaatttgataaatttgggcatatgaaaatacctgtgatactatcatcataatcaaagtaatagacactgtattagtttgttttcacactgctaataaagacatactcgagactgggcagtttacaaaagaaagaggtttaatggacttatagttccacagggctggggatgccttacaatcatggtggaaggcaaggaggagcaagtcacgccttacatggatggtggcaggcaaagagggagacttta-tatagggaaactcccccttataaaaccatcagatctcctgagacttattcactaccacaataacagcatgggaaagacatgcccccatgattcagttacctcccatggggttcctcccagaacacgtaggaattcaaggtgagatttgggtg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111261491 1513 + 115148730 GTTCTATTTACTGTTGTGGCCCTACTTTTCCTCATATTGCCTGAAGTAAATGTTGGTGGAAAAATTAATACacacacatacatagatgcatacacaaatacatTTTACTCAGTGCACTGTGT--TATATA----TATAACTTTGTTTTGAACATAGTAAATCTTAGAGATCTTCCTATAGTGGGACATTC----AATGACTGACtagcattgcactgtgtggaaataccaataatttattcaaacttctcattgcaaatggacaaattaggttgtttccaattttttataatcatgaagaatgaatcattgacaatctcagtcttgcccagaccttatctgggcacccatgcaggtatttttgtaagataaattcctataagaggaattattgagttgaagggatgacaca--tttttgattttgagagagaatctcgaattaactttaaaaattgacgtaccaaattataagtgagccaactgtaattgtgagagttcttgttttgttaattctcaatatcagcaggtattataaatcttcaagttttgttaagttaaaggataaaaattctagctatatctcattgttctgatttgcatttatgattactaacaaagtcaaatatt-ttaatgtgtttatggtcatgtgtacttt---tatgaattgcctttccttgtacattacctttttt-tattagatttttttcttaatgattgcagaagCTTGA--------ACCTTTTGATGTTTATTATTTGTCTGTTATGTGCATTTCAAAGAATTTCTGCATATCTGTTGTTTATGA-TTAACATTTTTGAATGGTATTCTTTCAAATGTAACTAAttttttaagagctttattgagatgtaattgatatatgaagaactgcactata-------------------------------------------------------------------------------cttGAAAtccggggctcaagtgatcc-cctgccttggcagctagggtagctaggaatataaatgcacactgcattgcccaggtcatttttaaa-ttttttgtatagatgggatcttcctgtgttgccaggctggtcttgaactcctggcctcaagcaatactcctgtctcagactcccaacactctgggattacaggtgtgagccactgcacttggATCaactatgcatgtttaatgtatacaatttgataaatttgggcatatgaaaacacctgtgatactatcatcataatcaaagtaatagacactgtattagtccattttcacactgctgataaagacatacctgagactgggcaatttacaaaagaaagaggtttaatggacttacagttccacagggctggggatgcctcacaatcatggtggaaggcaaggaggaccaagtcacatcttacatggatggtggcaggcaaagagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttattcactatcacaagaaccgcatgggaaagacgtgcccccatgattcagttacctcccactgggtcccccccagaacacggaggaattcaagatgagatataggtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181063736 1512 + 184069350 GTTCTATTTACTGTTGTGGCCCTACTTTTCCTCATATTGCCTGAAGTAAA---TGGTGGAAAAATTAATACACACACATACCTAGATGCATTCACAAATACATTTTACTCAGCTCACTGTGT--TATATA----TATAGCTTTGTTTTGAACATAGTAAAtcttagagatcttcctacattgggacattctctcaatgactgactagtattgcactgtgtggaaatatcaatcatttattaaatcttctcattgcaaatggacaaattaggttgttaccaattttttataatcgtaaagaatgaatcattgactatctcagtcttgcccagaccttatctgggcacccatgcaggtatttttgtaagataaattcctataagaggaattattgagttgaagggatggcaca--tttttgattttgagagataatctcgaattaactttaaaaattgatgtaccaaattatatgtgagccaactgcaattgtaagagttcttgttttg-taattctcaatatcagcagatattataaatcttcaagttttgtcaagttaaaggataaaaatcctagctatatctcattcttctaatttgcatttatgattactaacaaagttaaatatt-ttaatgtgtttatggtcatgtgtacttttcttatgaattgcctttccttgcacattacctttttt-cattaattctttttcttaatgattgcagaagcttta--------ACCTTTTGATGTTTATTATT----TGTTATGTGCATTCCAAAGAATTTCTGCTAATCTGTTGTTTATGA-CTAACATTTTTGAATGGCATTCTTTCAAATGTAACTAATATTTTAAGAGGTTTACTGAGATGTAATTGATATATGAAGAACTGcactgta-------------------------------------------------------------------------------cttaaactcctgggctcaagtgatcc-cctgccttggcagctagggtagctaggaatataagagcacactatgctgcccaggtcatttttaaa-ttttttgtacagatggaatattcctgtgttgccaggctagtcttgaattcctggcctcaagcgatactcctgtctcagactcccaacactgtgggattacaggtgtaagctactgcacctggcTCaactatgcatgtttaacgcatacaatttgatcaatttgggcatatgaaaacacctgtgatactatcatcataatgaaagtaaaagataCtgtattagttcattttcacactgctgataaagacatacctgagactgggcaatttacaaaagaaagaggtttaatggagttacagttccacagggctggggatgcctcacaatcatggtaggaggcagggaggagcaagtcacatcttacacggatggtggcaggcaaagagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttgttcactatcacaagaacagcatgggaaagacatgcccccatgattcagttacttcccaccgagtccctcccacaacatgtaggaattcaagatgagatttgggtg i rheMac3.chr5 C 0 I 2974 s macFas5.chr5 186401290 1513 + 189454096 GTTCTATTTACTGTTGTGGCCCTACTTTTCCTCATATTGCCTGAAGTAAA---TGGTGGAAAAATTAATACACACACATACCCAGATGCATTCACAAATACATTTTACTCAGCACACTGTGT--TATATA----TATAGCTTTGTTTTGAACATAGTAAAtcttagagatcttcctatattgggacattctctcaatgactgactagtattgcactgtgtggaaatatcaataatttattaaatcttctcattgcaaatggacaaattaggttgtttccaattttttattatcataaagaatgaatcattgactatctcagtcttgcccagaccttatctgggcacccatgcaggtatttttgtaagataaattcctgtaagaggaattactgggttgaagggatgacaca--tttttgattttgagagataatctcgaactaactttaaaaattgatgtaccaaattatatgtgagccaactgcaattgtaagagttcttgttttg-taattctcaatatcagcagatattataaatgtttaagttttgtcaagttaaaggatgaaaatcctagctatatctcattcttctaatttgcatttatgattactaacaaagttaaatatt-ttaatgtgtttatggtcatgtgtacttttcttatgaattgcctttccttgcacattacctttttt-cattaattctttttcttaatgattgcagaagcttta--------ACCTTTTGATGTTTATTATTTGTCTGTTATGTGCATTCCAAAGAATTTCTGCTAATCTGTTGTTTATGA-CTAACATTTTTGAATGGCATTCTTTCAAATGTAACTAATATTTTAAGAGGTTTACTGAGATGTAATTGATATATGAAGAACTGcactgta-------------------------------------------------------------------------------cttaaactcctgggctcaagtgatcc-cctgccttggcagctagggtagctaggaatataagagcacactatgctgcccaggtcatttttaaa-ttttttgtacagatgggatattcctgtgttgccaggctagtcttgaattcctggcctcaagcgatactcctgtctcagactcccaacactgtgggattacaggtgtgagctactgcacctggcTCaactatgcatgtttaatgtatacaatttgatcaatttgggcatatgaaaacacctgtgatactatcatcataatcagagtaaaagacactgtattagttcattttcacactgctgataaagacatacctgagactgggcaatttacaaaagaaagaggtttaatggacttacagttccacagggctggggatgcctcacaatcatggtaggaggcaaggaggggcaagtcacatcttacacggatggtggcaggcaaagagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttgttcactatcacaagaatagcgtgggaaagacatgcccccatgattcagttacttcccactgagtccctccc---acatgtaggaattcaagatgagatttgggtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176016701 1516 + 178775436 GTTCTATTTACTGTTGTGGCCCTACTTTTCCTCACATTGCCTGAAGTAAA---TGGTGGAAaaattaatacacacacatacacagatgcaTTCACAAATACATTTTACTCAGCACACTGTGT----TATA----TATAGCTTTGTTTTGAACATTGTAAATCTTAGAGATCTTCCTATATTGGGACATTCTCTCAATGACTGACTAGTATTGCACTGTGTGGAAATACGAATAATTTATTAAATCTTCTCATTGCAAATGGACaaattaggttgtttccaattttttataATCATAAAGAATGAATCATTGACTATCTCAGTCTTGCCCAGACCTTGTCTGGGCACCCATGCAGGTATTTTTGTAAGATAAATTCCTATAAGAGGAATTACTGAGTTGAAGGGATGACACA--TTTTTGATTTTGAGAGATAATCTCGaactaactttaaaaattgatgtaCCAAATTATATGTGAGCCAACTGCAATTGTAAGAGTTCTTGTTTTG-TAATTCTGAATATCAGCAGATATTATAAATGTTTAAGTTTTGTCAAGTTAAAGGATAAAAATCCTAGCTATATCTCATTCTTCTAATTTGCGTTTATGATTACTaacagagttaaatatt-ttaatgtgtttatggTCATGTGTACTTTTCTTATGAATTGCCTTTCCTTGCACATTAccttttttccattaattttttttcttaatgattgcAGAAGCTTTA--------AccttttgatatttattatttgtctGTTATGTGCATTCCAAAGAATTTCTGCTAATCTGTTGTTTATGA-TTAACATTTTTGAATGGCATTCTTTCAAATGTAACTAATATTTTAAGAGGTTTACTGAGATGTAATTGATATATGAAGAACTGCACTGta-------------------------------------------------------------------------------cttaaactcctgggctcaagtgatcc-cctgccttGGCAGCTAGGGTAGCTAGGAATATAAGAGcacactatgctgcccaggtcatttttaaatttttttgtacagatgggataTTCCTgtgttgccaggctagtcttgaattcctggcctcaagcgatactcctgtctcagactcccaacactgtgggattacaggtgtaagctactgcacctggctcaaCTATGCATGTTTAACGCATACAATTTGATCAATTTGGGCATATGAAAACACCTGTGATACTATCATCATAATGAAAGTAAAAgatactgtattagttcattttcacactgctgataaagacatgcctgagactgggcaatttacaaaagaaagaggtttaatggacttacagttccccagggctggggatgcctcacaatcatggtaggaggcagggaggagcaaatcacatcttacatggatggtggcaggcaaagagggaGAGCTTA-tgtagggaaactcccccttataaaaccatcagatctcctgagacttgttcactatcacaagaacagcatgggaaagacatgcccccatgattcagttacttcccaccgagtccctcccacaacatgtaggaattcaagataagatttgggtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132859696 1513 + 135778131 GTGCTATTTACTGTTGTGGCCCTGCTTTTCCTCACATTGCCTGAAGTAAA---TGGTGGAAAAATTAATACACACACATACCCAGATGCATTCACAAACACGTTTTACTCAGCACACTGTGT--TATATA----TATAGCTTTGGTTTGAACATAGTACATCTTAGAGATCTTCCTATATTGGGACGTTCTCTCAGTGACTGACtagtattgcactgtgtggaaatatcaataatttattaaatcttctcgttgcaaatggacaaattaggttgtttccaattttttataatcgtaaagaatgaatcattgactatctcagtcttgcccagaccttatctgggcacccgtgcaggtatttttgtaagataaattcctgtaagaggaattattgagttgaagggatgacaca--tttttgattttgagagataatctcgaactaactttaaaaattgatgtaccaaattatatgtgagccaactgcaattgtaagaggtcttgttttg-taattctcaatatcagcagatattataaatgtttaagttttatcaagttaaaggatgaaaatcctagctatatctcattcttctaatttgcatttatgattactaacaaagttaaatatt-ttaatgtgtttatggtcatgcgtacttttcttatgaattgcctttccttgcacattacctttttttcattaatt-tttttcttaatgattgcagaagcttta--------ACCTTTTGATGTTTATTATTTGTCTGTTATGTGCATTCCAAAGAATTTCTGCTAATCTGTTGTTTGTGA-CTAACATTTTTGAATGGCATTCTTTCAAATGTAACTAATATTTTAAGAGGTTTACCGAGATGTAATTGATATATGAAGAACTGcactgta-------------------------------------------------------------------------------cttaaactcctgggctcaagtgatcc-cctgccttggcagctagggtagctaggaatataagagcacactatgccacccaggtcatttttaaa-ttttttgtacagatgggatattcctgtgttgccaggctagtcttgaattcctagcctcaagcggtactcctgtctcaggctcccaacattgtgggattacaggtgtgagctactgcacctggcTCaactatgcatgtttaatgtatacaatttgataaatttgggcatatgaaaacacctgtgatactatcatcataatcagagtaaaagacaCtgtattagttcattttcacactgctgataaagacatacctgagactgggcaatttacaaaagaaagaagtttaatggacttacagttccacagggctggggatgcctcacaatcatggtaggaggcagggaggagcaagtcacgtcttacatggatggtggcaggaaaatagggagagctta-tgtagggaaactcccccttataaaaccatcagatctcctgagacttgttcactatcacaagaacagcatgggaaagacatgcccccatgattcagttacttcccactgagtgcctccc---acatgtaggaattcaagaggagatttgggtg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188244158 1584 - 190850796 GTTTTATTTGCTGCTGTGGCCCTACTCTTCCTCATATTGCCTGAAGTAAAGGTTGGTGGAAAATTTAATACACACACATACATAGATGTATACACAAATACATTCTGCTCAGTGCACCATGT--TATATATATTTATAACTTTGTTTTGAACATCGTAAATCTTAGAGATCTT---------AGAGATTCTCTCaatgactgactagtattgcactgtctggaaataccaataatttattaaaccttttcattgaaaatgcgcaaattaggttgtttccaatttgttataatcataaagaatgattcattgaccatctcagtcttgcccagaccatatctgggcacctatgcaagtatttttgtcagataaattcctagaagaggaattattgagttgaagggatgacacatttttttgattttgagagatgctctcgaattaactttaaaacttgatgtaccaagttatctttgaggccgctgcaactgtaagagttcttgttctg-taattctcaaaatcaccagatataataaatcttcaaactttgtcaagtcaaaggataaagattctagctatatctcgtcattctaatttgcatttatgattactactaaggttaaatattcttaatgtgtttatagtcatgtgtacttttcctatgaatcgccttttcatgtacat---ctttttt-tattag-tttttttcttAATGATCGCAGAAGCTTTA--------ACCTTCTGATGTTTAGTATTTGTCTGCTATGTGCATTCCGAAGAATTTCTG---ATCTGTTGTTTATGATTTAACATTTTTGAATGGTGTTCTTTCAAACATAACCTA-Attttaacagctttattgagatgtaattgatatatgaagaactgcactgtacatattattctttttagagatgggtcttgctctgttgctcaggctaggatgcagtggtatgatcctagcttactacagccttgaactcctgggcttaaatgatcctcctgccttggcctcctgggtggttaggactataagtgcatgctaccctgcccagctcatttttaaa-ttttttgtatacatgggatcatcctgtgttgccaggcaggtcttgaactcctggcctcaagccatactcctgtctcagacttccaacactctgggattacaggtgtgagccactgtacctggatcaactaggcatgtttaatatatataatttgataaatgtggacctatggaaacatctgtgatactctcgccataataaaagtaatggacactgtattaattcattttcacactgctgataaagacagacccaagactgggcaagttagaaaagaaagaggcttaacggacttagggttacacagggct-aggatgcctcacaatcatggtggaaggcgaggaggagcaagtcacatatcacttggatggtggcaggcaaagagagagagcttattgtagggaaactcccccttat--aaccatcagatctcctgagactt----actatcacaagaacagcatgggaaagatatgcccccatgattcaattacatcccaccaggtccttcccacaacacataggaattcaagatgagatttgtgtg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I a score=1172008.000000 s hg38.chr4_KI270785v1_alt 58673 556 + 119912 gggacatagccaaaccatGTAAttccacccaagctcctcccaaatctcatgtcctcacatttcaaagccaatcattccttcccaacagttccccaaagtcataactcatttcagcattaactcaaaagtccacagtccaaagtctcatttgagacaaggcaagtcccttctgtctatgagcctgtaacatcaaaagcaagttagttacttcctagatacaatgtgggtacaggcattgggtaaatacagccattccaaatgggaaacattggccaaaacaaaggagctacaggccccatacaagtccgaaatccagtggggcagtcaaatcctaaagatccaaaatgagctcctttgac-ccatgtctcacattcaggtcacgctgatgcaagaggtgcattccc-tggccttgggcagctccacccctgtggttttgctggatatagcccctctcctgactgctttcacaggctggtattgtctgtggcttttccaggggcacagtgcaagctgttggtggatctaccattcttgggtctggagaacagtggccctt s panTro4.chr4 190326131 556 + 193495092 gggacatagccaaaccatatAAttccacccaagcccctcccaaatctcatgtcctcacatttcaaagccaatcattccttcccaacagttccccaaagtcataactcatttcagcattaactcaaaagtccacagtccaaagtctcatttgagacaaggcaagtcccttctgcctatgagcctgtaacatcaaaagcaagttagttacttcctagatacaatgtgggtacaggcattggataaatacagccattccaaatgggaaacattggccaaaacaaaggagctacaggccccatacaagtccgaaatccagtggggcagtcaaatcctaaagatccaaaatgagctcctttgac-ccatgtctcacattcaggtcacgctgatgcaagaggtgcattccc-tggccttgggcagctccacccctgtggttttgctggatatagcccctctcctgactgctttcacaggctggtattgtctgtggcttttccaggggcacagtgcaagctgttggtggatctaccattcttgggtctggagaacagtggccctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195299820 557 + 198332218 gagacacaaccaaaccatatAAttccacccaagcccctcccaaatatcatgtcctcacatttcaaaaccaatcatgccttcccaacagttccccaaagtcataactcatttcagcattaactcaaaagtccacagtccaaagtctcctcctagacaaggcaagtcccttccgcctatgagcctgtaacatcaaaagcaagtgaattacttcctagatacaatgggggtacaggcattgggtaaatacagcctttccaaatgggaaacatttgccaaaacaaaggagctacaggacccatgcaagtccgaaatccagtggggcagtcaaatcctaaagatccaaaatgagctcctttgactccatgtctcacatccaggtcatgccgatgcaagaagtgcattcccacggccttgggtagctccacccctgtggttttgcagggtatagcccctttcctgactgctttcacaggctggtattgtctgt-gcttttccaggggcacagtgcaagctgttggcggatctaccgttcttgggtctggagaacagtggccctt i ponAbe2.chr4 C 0 I 62 s nomLeu3.chr7b 111263004 552 + 115148730 gagacacaaccaaaccatatAAttccacccaagcccctcccaaatctcatgtcctcacatttcaaaaccaatcatgccttcccaacagttccccaaagtcataactcatttcagcattaactcaaaagtccacagtccaaagtctcatctgagacaaggcaagtcccttccgcctatgagcctgtaacatcaaaagcaagtgagttacttcctagatacaatggggctacaggcactgggtaaatacagccatcccaaatgggaaacattggccagaacaaaggagctacaggccccatgcaagtctgaaatccagtggggcagtcaaatcctaaagatccaaaatgagctcct------ggatgtctcacatccaggtcatgctgatgcaagaagtgcattcccatggccttgggtagctccacccctgtggttttgcagggtatagcccctctcctgactggtttcacaggctggtattgtctgtggctttttcaggggcctggtgcaagctgttggtggatctaccattcttgggtctggagaacagtggccctt i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186402803 502 + 189454096 gggacacagccaaaccatatAAttccacccaagcccctcccaaatctcatgtcctcacatttcaaaatcaatcattccttcccaacagtttcccaaagtcataattcatttcagcattaactcaaaagtccacagtccaaagtctcatccgagacaaggcaagtcccttctgcctatgagcctgtaacatcaaaagcaagtgagctacttcctagatacagtg-----------------taaatacagccattccaaatgggagatattggccaaaacaaaggagcttcaggccccatgcaagtctgaaatctagtggggcagtcaaatcctaaacatccaaaatgagctcctttgactccatatctcacatccaggtcatgctgatgcaagaggtgcattcctatggtctt------------------------------------ccctgtcctgactgctttcacaggctggtattgtctgtggcttttccaggggcatggtgcaagctgttggtggatctgcccttcttgggtctggagaacagtggcc--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176018217 502 + 178775436 gggacacagccaaaccatataattccacccaagcccctcccaaatctcatgtcctcacatttcaaaaccaatcattcctttccaacagttccccaaagtcatAACTCATTTCAgcgttaactcaaaagtccatagtccaaagtctcatctgagacaaggcaagtcccttctgcctatgagcctgtaacaTCAAAAGCAAGtgagttacttcctagatacagtg-----------------taaatacagtcattccaaatgggagacattggccaaaacaaaggagctacaggccccatgcaagtctgaaatctagtggggcagtcaaatcctAAACATCCAAAATGagctcctttgactccatatctcacatccaggtcatgctgatgcaagaggtgcaTTCCTATGGTCTT------------------------------------CCCTGTCCTGagtgctttcacaggctggtattgtctgtggcttttccaggggcatggtgcaagctgttggtggatctgcCCTTCTTgggtctggagaacagtggcc--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132861209 505 + 135778131 gggacacagccaaaccatatAAttccacccaagcccctcccaaatctcatgtcctcacatttcaaaatcaatcattccttcccaacagttccccaaagtcataattcatttcagcattaactcaaaagtccacagtccaaagtctcatctgagacaaggcaagtcccttctgcctatgagcctgtaacatcaaaagcaagtgagctacttactagatacagtg-----------------taaatacagccattccaaatgggagatattggccaaaacaaaggagcttcaggccccatgcaagtctgaaatctagtggagcagtcaaatcctaaacatccaaaatgagctcctttgactccatgtctcacatccaggtcatgctgatgcaagaggtgcattcctatggtctt------------------------------------ccctctcctgactgctttcacaggctggtattgtctgtggcttttccaggggcatggtgcaagctgttggtggatctgcccttcttgggtctggagaacagtggccctt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188245742 556 - 190850796 gggacacagtcaaaccatatAAttccaccccagcccctcccaaatctcacatcctaacatttcaaaaccaatcatgccttcccaacagtttcccgaagtcgtaactcatttcagcattaactcaaaagtccacagtccaaagtctcattcgagacaaggcaagccccttctgcctatgagcctgtaaagtcaaaaac-tgttatttacttcctagatgcaacgtggatactggcattgggtaaacacagctgttccatatgggaaaagctggccaaaacaaaggagttacaggcctcatgcaagtctgaaatccagtggggcagtcaaatctgaaagatccaaaatgatttcctttgattccatgtctcgcattcaggttgcactgatgcaagaggtgtgttcccacagccttgggcagccctgcccctgtggttttgcagggtgtagcccctctcctgactgctttcacaggctggtgttgtctgtggcttttctagggccaca-tgcaagttgtcagtggatctaccattctggggtctggagaacagtggccctt i calJac3.chr3 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e rheMac3.chr5 181065248 2974 + 184069350 I a score=1476.000000 s hg38.chr4_KI270785v1_alt 59229 5 + 119912 gtttc- s panTro4.chr4 190326687 5 + 193495092 atttc- i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111263556 5 + 115148730 ttttc- i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132861714 5 + 135778131 ttttc- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188246298 5 - 190850796 -tttcc i calJac3.chr3 C 0 I 2720 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e papAnu2.chr5 176018719 0 + 178775436 C e macFas5.chr5 186403305 0 + 189454096 C e rheMac3.chr5 181065248 2974 + 184069350 I e ponAbe2.chr4 195300377 62 + 198332218 I a score=7206.000000 s hg38.chr4_KI270785v1_alt 59234 13 + 119912 ttttcttttcttt s panTro4.chr4 190326692 13 + 193495092 ttttcttttcttt i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111263561 13 + 115148730 ttttcttttcttt i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132861719 13 + 135778131 TTTTCTTTtcttt i chlSab2.chr7 C 0 I 224 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e calJac3.chr3 188246303 2720 - 190850796 I e papAnu2.chr5 176018719 0 + 178775436 C e macFas5.chr5 186403305 0 + 189454096 C e rheMac3.chr5 181065248 2974 + 184069350 I e ponAbe2.chr4 195300377 62 + 198332218 I a score=6773.000000 s hg38.chr4_KI270785v1_alt 59247 102 + 119912 tcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcctttcctttccttttcttctctctctccttctctctctctctctctctct s panTro4.chr4 190326705 42 + 193495092 tctttt------------------------------------------------ttcctttccttttcttctctctctc------------tctctccttct i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111263574 71 + 115148730 tcttttcttttcttttcttttcttttcttttctct-------------------tttcttttctttctctctttctctc------------tctctctcttt i nomLeu3.chr7b C 0 I 1 s macFas5.chr5 186403305 40 + 189454096 --------------------ttttttcttttcttt-------------------tttcttttcttttctttctcacttc----------------------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176018719 29 + 178775436 -------------------------------cttt-------------------tttcttttcttttcttcctcacttc----------------------- i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e calJac3.chr3 188246303 2720 - 190850796 I e chlSab2.chr7 132861732 224 + 135778131 I e rheMac3.chr5 181065248 2974 + 184069350 I e ponAbe2.chr4 195300377 62 + 198332218 I a score=772249.000000 s hg38.chr4_KI270785v1_alt 59349 653 + 119912 ctctctctctctctctctctctctccctctcccttcccttcccttcctttcccttcctttcctttcctttcAtttttttt-gacatggagtttcactcttgtcatccaggctggagtacagtagtgtgattttggctcactgcaacctctgcctcctgggttcaagagattctcctgcctcagcttcctgagtagctgggattacaggtgcctgccaccatgcttggctaatttttt-gtatttttagtagatacagggttttgccatgttgggcaggttggtctcgaacttctgaccacaggtgatctgcctgccttggccttccaaagtgctgtgattacaggtgtgagccactgcacctggctgaacagtggcccttttttcacagctccattaggcagtactccagtagggactctgtgggggcttcaaccccacatttcccttcttcactgccctagcagaggttctccatgaggaccccacccctgcagcaaacttctgcctggacattcaggcatttccatacattttctgaaatctagacagaggttcccaaacctcaatcctcgacttctgtgaacttgcaggctcaacaccacatggaagctgccaaggcttggggtttacatcctctgaagc-aacagcttgggc s panTro4.chr4 190326747 649 + 193495092 ctctctctctctctctctccctctccctctcccttcccttcc-----tttcccttcctttcctttcctttcgtttttttttgacatggagtttcactcttgccatccaggctggagtacagtagtgtgattttggctcaccgcaacctccgcctcccgggttcaagagattctcctgcctcagcttcctgagtagctgggattacaggtgcctgccaccatgcttggctaatttttt-gtatttttagtagatacggggttttgccatgttgtgcaggttggtctcgaacttctgaccacaggtgatctgcctgccttggccttccaaagtgctgtgattacaggtgtgagccactgcacctggctgaacagtgacccttttttcacagctccattaggcagtactccagtagggactctgtgggggcttcaaccccacatttcccttcttcactgccctagcagaggttctccatgagaaccctgcccctgcagcaaacttctgcctggacattcaggcatttccatacattttctgaaatctagacagaggttcccaaacctcaatcctcgacttctgtgaacttgcaggctcaacaccacatggaagctgccaaggcttggggtttccatcctctgaagc-aacagcttgggc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195300439 639 + 198332218 ctttctctctttctctctctctgtctttctcccttctcttcc-----cttcccttcccttcct---------tttttttt-gacatggagttttactctcgtcacccaggctagagtgcagtggtatgattttggctcaccgcaacctctgcctcccaggttcaagtgattctcctgcctcagcttcctgagtagctgggattacaggtgcctgccaccacgctcggctaatttttt-gtatttttagtagatacagggttttgccatgttgggcaggctggtctcgaactcctgacctcaggtgatctgcctgtcttggcctcccaaagtgctgtgattacaggtgtgagccaccgcacct-gctgaacagtgacccttttctcacagctccattaggcagtaccccagtagggactctgtgggggcttcaaccccacatttcccttcttcactgccctaggagaggttctccatgaggaccctgcctctgcagcaaatttctgcctggacattcaggcatttccatacattttctgaaatgtagacagaggttcccaaacctcaatcctcaacttctgcaaacttgtaggctcaacaccacgtggaagctgccaagacttggggcttccaccctcaaaagcaaacagcttgagc i ponAbe2.chr4 I 62 C 0 s nomLeu3.chr7b 111263646 599 + 115148730 ----------------------------------tcccttcc-----tttcccttcct--------------tttttttt-gacatggagtttcactcttgtcacccaggctggagtgcagtggtatgattttggctcaccgcaacctccacgtcctgggttcaagtgattctcctgcctcagcttcctgagtaactgggattacaggtgcctgccaccacgctcggctaatttttt--tatttttagtagatacagggttttgccatgttgggcaggctggtctcgaactcctgacctcaggtgatctgcctgccttggcctcccaaagtgctgtgattacaggtgtgagccaccgcacctggccaaacagtgacccttttttcacagctccactaggcagtaccccagtagggactgtgtgggggctccaaccccacatttcccttcttcactgccctaggagaggttctccatgaggaccccgcccctgcagcaaacttctgcctggacattcaggcatttccatacattttctgaaatctagacagaggttcccaaacctcaatccttgacttctgtgaacttgcaggttcaacaccacatggaagctgccaaggctgggggcttccaccctctgaagc-aacaggttgagc i nomLeu3.chr7b I 1 C 0 s macFas5.chr5 186403345 639 + 189454096 ttctctctctctctcTTTCtcccttcccttcccttcccttcc-----cttcccttccctttcc---------tttttttt-tacatggagtttcactcttgtcacccaggctggagtgcagtggtgtgattttggctcaccacaacctccgtctcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggcacctgccaccacgcttggctaatttttttgtatttttagtagatacagggttttgccatgttgggcaggctggtctcaaactcctgacctcagttgatctgcccaccttgacctcccaaagtgctgtgattacaggtgtgagccactgcacctggccgaacagtgaccctttttacacagctccactaggcagtaccccagtagggactctgtgggggcttcaactgcacatttcccttcttcactgctttagcagaggttctccatgaggaccccgcccctgcagcaaacttctgcctggacattcaggcattttcatacattttctgaaatctagacagaggttcccaaaccttaatccttgacttctgtgaacttgcaggcttaacaacacatggaagctgccaaggctt-gggcttccaccttctgaagc-aacagcttgagc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176018748 636 + 178775436 ttctctctctctctttttctctctctttctcccttcccttcc-----cttcccttccctt------------tttttttt-tacatagagtttcactctcgtcacccaggctggagtgcagtggtgtgattttggctcaccacaacctctgtctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaagcacctgccaccacgcttggctaatttttttgtatttttagtagatacagggttttgccatgttgggcaggctggtctcaaactcctgacctcagttgatctgcccaccttgacctcccaaagtgctgtgattacaggtgtgagccactgcacctggccgaacAGTGACCCTTTTtacacagctccactaggcagtaccccagtaggGACCCTGTGGGGGCTTCAACTGCACATTTCCCTTCTTCACTGctttagcagaggttctccatgaggaccccgcccttacagcaaacttctgcctggacattcaggcattttcatacattttctgaaatctagacagaggttcccaaaccttaatcCTTGACTTCTGTGAACTTGCAGGCTTAACaacacatggaagctgccaaggctt-gggctTCCACTTTCTGAAGC-AACAgcttgagc i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e calJac3.chr3 188246303 2720 - 190850796 I e chlSab2.chr7 132861732 224 + 135778131 I e rheMac3.chr5 181065248 2974 + 184069350 I a score=2951255.000000 s hg38.chr4_KI270785v1_alt 60002 1664 + 119912 tgtaccttggctctttttagtcacagctggagtggctggaatgcagggcaccaagtccatagactgcacacagcagagggaccccggccctggcccatgaaaccatttttttcctcctaaacctctggtcctgtgatgggaggggctgcttcaaaggtctctaacatgcccggaagacattttccccatggtcttgggaattaacattaggttcctagttacttatgtaaatttctgcagccagcttgaatttctcctcagaaaat-gggattttcttttctattgcattgtcaggctgcaaattttccaaacttttatgcccctttccccttttaaaactgaatgcttataacagcacacaagtcacctcttaaatgctttgctgcttggaaatttcttctaccagataccctaaatcatctctctcaagttcaaagttccacaaatctctagggcaggggcaaattgctgccagtctctttgctaaaatataacaagagttacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtctgtatcattatcagccttctagtcaaagccattcaacaagtctctagggagttccaaactgtctcacagtttcctgtcttcttctgagccctccaaggtgttctaacatctgcctgttacccagttgcaaagtcgcttccacattgttgtctatcgttgcagtagcaccccactctactggtac-----------------------cagtttactgcattagtctgttttcacgcggctgataaagacatacctgagactggtcaatttacaaaagacagaggtttaacggacttatagttacacagggctggggaggcctcacaatcatagcagaaggcaaggaagagtaagtcacatcttatgtggatggcgagaggcaaagaa--agagcttgtgcagggaaactcccccttataaaaccatcagcacttgtgagacttattcattacgctgagaacagcttgggaaagacctgccctcatgtttcaattaccttccactgggtctctcccacaacacataggaatttgagatgagatttgggtggggacacagccaaaccatatcagacaccaacaccttctaatgttttcttgtgtcctttcccctcattgttgtagtaagaacacttaatgtgagacctcttaacaaattttggaatgcaccacatcatattgctaactataggcaatatgttgtaagatagatctctagaatgtattcaactagcataactaaaactttacaccaattgaacaacaactccacatttcccctactcctgagtttctgggaatgactattgtattctttgattctataattttgagtatttcacatccctcatataagtagaatcatgcaatatttgtccttctgtaactggcttattttatttaacattatgtcttttgggtacatccatgttttcacacatagcaagattttgttgttttcgaaggttgagtaatattcaattgtattatacaccacattttctttatccattcatctgtcaatggacaATCTTTTATTGAACAATTTATTAGTTTTTAGTGGTCAAAGAACAAGATCATGTCCTTTATATGATTTAtatgttttggttgttattttag s panTro4.chr4 190327396 1663 + 193495092 tgtaccttggctctttttagtcacagctggagtggctggaatgcagggcaccaagtccatagactgcacacagcagagggaccccggccccggcccatgaaaccatttttttcctcctaaacctctggtcctgtgatgggaggggctgcttcaaaggtctctaacatgcccggaagacattttccccatggtcttgggaattaacattaggttcctagttacttatgtaaatttctgcagccagcttgaatttctcctaagaaaat-gggattttcttttctattgcattgtcaggctgcaaattttccaaacttttatgcccctttccccttttaaaactgaatgcttataacagcacacaagtcacctgttaaatgctttgctgcttggaaatttcttctaccagataccctaaatcatctctctcaagttcaaagttccacaaatctctagggcaggggcaaattgctgccagtctctttgctaaaatataacaagagttacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtctgtatcgttatcagccttttagtcaaagccattcaacaagtctctagggagttccaaactgtctcacagtttcctgtcttcttctgagccctccaaggtgttctaacatctgcctgttacccagttgcaaagtcgcttccacattgttgtctatcgttgcagtagcaccccactctactggtac-----------------------cagtttactgcattagtctgttttcacgcggctgataaagacatacctgagactggtcaatttacaaaagaaagaggtttaacggacttatagttccacagggctggggagccctcaaaatcatagcagaaggcaaggaagagtaagtcacatcttatgtggatggcgagaggcaaagaa--agagcttgtgcagggaaactcccccttataaaaccatcagcacttgtgagacttattcattacgctgagaacagcttgggaaagacctgccctcatgtttcaattaccttccactgggtctctcccacaacacataggaatttgagatgagatttgggtggggacacagccaaaccatatcagacaccaacaccttctaatgttttcttgtgtcctttcccctcattgttgtagtaagaacacttaatgtgagacctcttaacaaattttggaatgcaccacatcatattgctaactataggcaatatgttgtaagatagatctctagaatgtattcaactagcataacgaaaactttacaccaattgaacaacaactccacatttcccctactcctgagtttctgggaatgactattgtattctttgattctataattttgagtatttcacatccctcatacaagtagaatcatgcaatatttgtccttctgtaactggcttattttatttaacattatgtcttttgggtacatccatgttttcatacatggcaagattttgttgttttcaaaggttgagtaatattcaattgtattatacaccacattttctttatccattcatctgtcaatggacaATCTTTTAT-GAACAATTTATTAGTTTTTAGTGGTCAAAGAACAAGATCATGTCCTTTATATGATTTATATGttttggttgttattttag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195301078 1665 + 198332218 tgtaccttggctctttttagtcacagctggaatggctgggatgcagggcaccaagtccatagacggcacacagcagagtgaccctggccccggcccatgaaacca-ttttttcctcctaaacctctggtcctgtgatgggaggggctgcttcaaaggtctctaacatgccctggagacattttccccatggtcttggggattaacattcatctcctcgttacttatgcaaatttctgcagccagcttgaatttctcctcagaaaat-gggattttcttttctattgcaatgtcaggctgcaaattttccaaacttttatgcccctttccccttttaaaactgaatgcttataacagcacacaaatcacctcttaaatgctttgctgctttgaaatttcttctgccagataccctaaatcatctctctcaagttcaaagttccacaaatctctagggcaggggcaaattgctgccagtttctttgctaaaatataacaagagtcacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtctatatcattatcagccttttagtcaaagccattcaacaagtctccagggagttccaaactgtctcacagtttcctgtcttcttctgagccttccaaggtgttctaacatctgcctgttacccagttgcaaagttgtttccacattgttgtctattgttgcagtagcaccccactctactggtac-----------------------cagtttACtgcattagtccgttttcacactgctgataaagacatacctgagactggtcaatttacaaaagaaagaggtttaacagacttatagttccacagggctggggaggcctcacaatcatagcagaaggcaaggaagagtaagttgcatcttatgtggatggccagaggcaaagaaagagagcttgggcagggaaactccctcttataaaaccatcagcgcttgtgagacttattcactgcgctgagaacagcttgggaaagacctgccctcatgtttcaattaccttccactgggtctttcccacaacacataggaatttgagatgagatttgggtggggacacagccaaaccatatcagacaccaacaccttctaatgtttccttgtgtcctctcccctcgttgttgtagtaagaacacttaacatgagacctcttaacaaattttggaatgcaccacatcatattgctaactataggcaatatgttgtaaaatagatctctagaatgtattcaactagcataacgaaaactttacaccaattgaacaacaactccacatttcccctactcctgagtttctgggaatgactattgtattctttgattctataattttgagtatttcacatccctcatataagtagaatcatgcaatatttgtccttctgtaactgacatactttatttaacattatgtcttttgggtacatccatgttttcacacatagcaagattttgttgtttttgaaggttgagtaatattcaattgtattatacaccacattttctttatccattcatctgtcaatggacaATCTTTTATTGAACAATTTATTAGTTTTTTGTGGTCAAAGAACAAGATCATGTCCTTTATATGATTTATATGttttggttgttattttag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111264245 1655 + 115148730 tgtacattggctcttttaagtcacagctggagtggctgggatacagggcaccaagtccgcagactgcacacagcagagggaccctggccccagcccatgaaacca-ttttttcctcctaaacttctggtcctgtgatgggaggggctgcttcaaaggtctctaacatgccctggagacattttccccatggtcttggggattaacattcagctcctcgttacttatgaaaatttctgcagccagcttaaatttctcctcagaaaat-gggattttcttttctatcatattgtcaggctgaaaattttccaaacctttatgcccttttcccattttaaaactgaatgcttataacagcaaacaagtcacttcttaaatgctttgctgcttggaaatttcttccgccagacaccctaaatcatctctctcaagtttaaagttccgcaagtctctagggcaggggcaaattgctgccagtctctttgctaaaat---acaagagtcacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtccatatcattatcagccttttagtcaaagccattcaacaagtctctagggagttccaaactttctcacag-ttcctgtcttcttctgagccctccaaggtgttctaacctctccctgttacccagttgcaaagtcgcttccacattgttgtctatctttgcagtagcaccccactctactggtac-----------------------cagtttactgcattagtccgttttcacactgctgataaagacatacctgagactggtcaatttacaaaagaaagagatttaacagacttatagttccacagggctggagaggcctcacaatcatagcagaaggcaaggaagagtaagtcacatcttatgtggatggcaagaggcaaagagagagagcttgtgcagggaaactcccccttataaaaccatcagagcttgtgagacttattcactatgctgagaacagcttgggaaagacctgcccccatgattcaattacctcccaccaggtctctcccacaacacataggactttgagatgagatttgggtggagacacagccaaaccatatcagacaccaacaccttctaatgtttccttgtgtcctctcccgtcattgttgtggtaagaacacttaacatgagaccttttaacaaattttggaatgcaccacatgatattgctaactataggcaatatgttgtaaaacagatctctagaatgtattcaactagcataactaaaactttgtaccaattgaacaacaactccacatttcccctactcctgagtttctgggaatgactattgtattttttgattctataagtttgagtattttacatccctcatataagtagactcatgcaatatttgtccttctgtaactggcttattttatttaaca-tatgtcttttgggtacatccatgttttcacacatagcaagattttgttgtttttgaaggctgagtaatattccattgtattatacaccacattttctt----catttatctgtcaat-gACAATCTTTTATTGAACAATTTATTAGTTTTTTGTGGTCAAAGAACAAGATCAtttcctttatatgatttatatgttttggttgttattttag i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186403984 1656 + 189454096 tgtaccttggctctttctagtcatggctggagtggctgggatgcagggcaccaagtctgtagactgcacacagcagagggaccccggccctggcccatgaaacca-tttcttcctcctaaacctctggtcctgaaatgggagggactgcttcaaagatctctaacatgccctggagatattttccccaaggtcttggggattaacatttggctcctagttacttatgcaaatttctgcagccagcttgaatttctcctcagaaaatggggattttcttttctatcacattatcaggctgcaaattttccaaacttttatgcctttttccccttttaaaactgaatgcctataacagcacacaagtcacctcttaaatgctttgctgcttggaaatttcttctgccagataccctaaatcatctctctccagttcaaagttccacaaatctctagggcaggagcaaattgcttccagtctctttgctaaaatataacaagagtcacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtccatatcattatcagccttttagtcaaagccattcaccaagtctctagggagtcccaaactttctcacagtttcctttcttcttctgacccctccaagctgttccaacctctgcctgttacccagttgcaaagtcgcttccacatggttggctatctttgcagtagcaccccactctactggtac-----------------------cagtttactgcattagtccgttttcacactgctgataaagacatacctgagactggtcaatttacaaaagaaagaggtttaacggacttatagttccccagggctggggaggcctcacaatcatagcagaaggcaaggag----aagtcacatcttatgtggatggcaagagacaaaaaacgagagcttgtgcagggaaactcctccttgtaaaatcatcagaggttgtgagacttattcactatgctgagaacagcttgggaaagacctgcccccatgattcagttgcctcccactgggtctctcccacaacacataggaatttgagatgagatttgggtggggacacagccaaaccgtatcagacaccaacaccttctaatgtttccttgtgtcctctcccctcattattgtagtaagaacacttaacatgagaacttttaacaaattttggaatgcaccacatcattttgctaactataggcaatatgttgtaaaatagatctctagaatttattcaactagcataactaaaactttacaccaattgaacaacaactccacatttcccctactcctgagtttctgggaatgactattgtattctttgattctttacgtttgagtattttacatccctcatataagtagaatcatgcaatatttgtccttctgtaactggcttat----tttaacgttatgtcttttgggtacatccaagttttcacacat-gcaagattttgttgttttagaaggctgagtaatattccattgtattctacaccacattttctttatccatttgtctgtcaatggac-atcttttattgaacaatttgttagttttttgtggtcaaagaataagatcatgtcctttatatgatttacattctttggttattattttag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176019384 1679 + 178775436 tgtaccttggctctttctagtcatggctggagtggctgggatgcagggcaccaagtccgtagactgcacacagcagagggaccccggccctggcccatgaaacca-tttctTCCTCCTAAACCTCTGGTCCTGAAATGGGAGGGACTGCTTCAAAGATCTCTAACAtgtcctggagatattttccccaaggtcttggggattaacatttggctcctagttacttatgcaaatttctgcagccagcttgaatttctcctcagaaaatggggattttcttttctatcacattatcaggctgcaaattttccaaacttttatgcctttttccccttttaaaactgaatgcctatAACAGCACACAAGTCacctcttaaatgctttgctgcttggaaatttcttctgccagacacCCTAAATCGTCTCTCtccagttcaaagttccacaaatctctagggcaggagcaaattgttgccagtctctttgctaaaatataacaagagtcacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtccatatcattatcaaccTTTTAGTCAAAGCCATTCACCAAGTCTCTAGGGAGTCCCAAACTTTCTCACAGtgtcctttcttcttctgagccctccaagctgttccaacctctgcctgttacccagttgcaaagtcacttccacatggTTGGCTATCTTTGCagtagcaccccactctactggcgCCTTTTACCAGTAGTCTACCAGTACGGTTTACTGCATTAGTCCGtgttcacactgctgataaagacatacctgagactggtcaacttacaaaagaaagaggtttaacggacttATAGttccccagggctggggaggcctcacaatcatagcagaaggcaaggag----aagtcatatcttatgtggatggcaagAGACAAAAAacgagagcttgtgcagggaaactcctccttGTAAAATCATCAGAggttgtgagacttattcactatgctgagaacagcttgggaaagacctgcccccatgattcagttgcctcccactgggtctctcccacaacacaaaggaatttgagatgagatttgggtggggacacagccaaaccatatcagacaccAACACCTTCTAATGTTTCCTTGTGTCCTCTCCCCTCATTATTGTAGTAAGAACACTTAACTTGAGAACTTTTAACAAATTTTGGAATGCACCACATCATTTTGCTAACTATAGGCAATATGTTGTAAAATAGATCTCTAGAATTTATCCAACTAGCATAACTAAAACTTTATACCAATTGAACaacaactccacatttcccctaCTCCTGAGTTTCTGGGAATGACTATTGTATTCTTTGATTCTTTACGTTTGAGTATTTTACATCCCTCACATAAgtagaatcatgcaatatttgtccttttgtaactggcttat----tttaaCGTTATGTCTTTTGGGTACATCCAAGTTTTCACACAT-GCaagattttgttgttttagaaggctgagtaatattccattgtattatacaccacattttctttatccatttgtctgtcaATGGAC-ATCTTTTATTGAACAATTTGTTAGTTTTTTGTGAtcaaagaataagatcatgtcctttatatgatttatattctttggtTGTTATTTTAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132861956 1656 + 135778131 tgtaccttggctctttctagtcatggctggagtggctggaattcagggcaccaagtccatagactgcacacagcagagggaccctggccctggcccatgaaacca-tttcttcctcctaaacctctggtcctgtgatgggagggactgcttcaaagatctctgacatgccctggagatgttttccccatggtcttggggattaacattcagctccttgctacttatgcaaatttctgcagccagcttgaatttctcctcagaaaatggggattttcttttctatcacattatcgggctgcaaattttccaaacttttatacccttttccccttttaaaactgaatgcctgtaacagcacataagtcacctcttaaatgctttgttgcttggaaatttcttctgccagttaccctaaatcatctctctcaagttcaaagttccacaaatctctagggcaggggcaaattgttgccggtctctttgctaaaatataacaggagtcacctttgctccagttcccaacaagttcctcatctccatctgagaccacctcagcctggatttcattgtccatatcattatcagccttttagtcgaagccattcagcaagtctctagggagtcccaaactttctcacagtttcctttcttcttctgagccctccaagctgttccaacctctgcctgttacccagttgcaaagtcgcttccacatggttggctatctttgcagtagcaccccactctactggtac-----------------------cagtttactgcattagtctgttttcacactgctgataaagacatgcctgagactggtcaatttacaaaagaaagaggtttaatggacttatagttccccagggctggggaggcctcacaatcatagcagaaggcaaggag----aagtcacatcgtatatggatggcaagagacaaagagagagagcttgtgcagggaaactcccccttgtaaaatcatcagagcttgtgagacttactcactatgctgagaacagcttgggaaagacctgcccccatgattcagttacctcccactgggtctctcccacaacacataggaatttgagatgagatttgggtggggacacagccaaaccatatcaGACAccaacaccttctaatgtttccttgtgtcctctcccctcattattgtagtaagaacacttaacatgagaacttttaacaaattttggaatgcaccacatcattttgctaactataggcagtatgttgtaaaatagatctctagaatttattcaactagcataactaaaactttataccaattgaacaacaactccacatttcccctattcctgagtttctgggaatgaccattgtgttctttgattctttacgtttgagtattttacatccctcatataagtagaatcatgcaatatttgtcctcctgtaactggcttat----tttaacattatgtcttttgggtacatccaagttttcacacat-gcaagattttgttgttttagaaggctgagtaatattccattgtattatacaccacattttctttatccatttgtctatcaatggac-atcttttattgaacaatttgttagttttttgtggtcaaagaataagatcatgtcctttatatgatttatattctttggttgttattttag i chlSab2.chr7 I 224 C 0 e canFam3.chr16 15731342 455 - 59632846 I e mm10.chr8 84726888 4242 - 129401213 I e calJac3.chr3 188246303 2720 - 190850796 I e rheMac3.chr5 181065248 2974 + 184069350 I a score=122624.000000 s hg38.chr4_KI270785v1_alt 61666 66 + 119912 aagcccttctccatttcagtagtataaatatatgtatttctgacctttttcttcttatactgtt---ag s panTro4.chr4 190329059 66 + 193495092 aagcccttctccatttcagtagtataaatatatgtatttctgacctttttcttcttatactgtt---ag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195302743 68 + 198332218 aagcctttctccatttcagtagtataaatatatatatttctgtcctttttcttcttatactgtt-agag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111265900 68 + 115148730 aagcccttctccatttcagtagtataaatatatatatttctgtcctttttcttcttatactgtt-agag i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186405640 69 + 189454096 aagcccttctccatttcaatagtataaatatatacatttctgtcttttttattcttacactgttttgag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176021063 69 + 178775436 AAGCCCTTCTCCATTTCaatagtataaatatatacatttctgtcttttttattcttaCACTGTTTTGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132863612 69 + 135778131 aagcccttctccatttcaatagtataaatatatacatttctgtcttttttattcttacatggttttgag i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15731797 62 - 59632846 aggttcccctttatctcaagattataaatatatttttctgtgtcctt----ttcttatactatt---at i canFam3.chr16 I 455 C 0 e mm10.chr8 84726888 4242 - 129401213 I e calJac3.chr3 188246303 2720 - 190850796 I e rheMac3.chr5 181065248 2974 + 184069350 I a score=1085435.000000 s hg38.chr4_KI270785v1_alt 61732 517 + 119912 tttttcagtataacattgaacttttaaaacaccttgactttttttctgagtatggtatgaattagggatatttgttactttt-ttcccatattaacagttattcacctaattatactttattcagttggtctagactttttcctacatatttgccatctttattataatttaaatcagcatatacacttggatttatttttggtctctctacatagggctatgtatcta-ttgtttaattcttag-----agatttatgtggatatgtggtaggtatatgtcttcactcactgcgcttattttcaacatttttttccattatatttattt-------gtttttctcttatagatgaacctgagaataatctgtcaagctgctgataaaaattctttatgaagttaaagattgcacagaacttacaaattaaattgggagaattgaatttcctgtaatattgaagtttctca--accaaaatattgtta----cccatttctatttttca---ctttttaaaaaatgtatgaa-----------------------------------------acaacatt- s panTro4.chr4 190329125 517 + 193495092 tttttcagtataacattgaacttttaaaacaccttgactttttttctgagtatggtatgaattagggatatttgttactttt-ttcccatattaacagttattcacctcattatactttattcagttggtctagactttttcctacatatttgccatctttattataatttaaatcagcatatacacttggatttatttttggtctctctacacagggctatgtatcta-ttgtttaattcttag-----agatttatgtggatatgtggtaggtatatgtcctcactcactgtgcttagtttcaacatttttttccagtatatttattt-------gtttttctcttatagatgaacctgagaataatctgtcaagctgctgataaaaattctttatgaagttaaagattgcacagaacttacaaattaaattgggagaattgaatttcctgtaatattgaagtttctca--accaaaatattgtta----cccatttctatttttca---ctttttaaaaaatgtatgaa-----------------------------------------acaacatt- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195302811 516 + 198332218 tttttcagtataacattgaacttttaaaacaccttgactttttttctgagtatggtatgaattagggatatttgttactttt-ttcccacataaacagtttttcacctcattatactttattcagttgttttagactttttcctacatattttccatctttattataatttaaatcagcatatacacttggatttatttttggtctgtctacacagggctatctatcta-ttgtttaATTCTTAG-----AGATTTATGTGGATATGTGGTAGGTATATGTCCTCACTCACTGTGCCTATTTTCAACA-TTTTTTCCATTATATTTATTT-------GTTTTACTCTTATAGATGAACCTGAGAATAATCTGTCAAGCTGCTGATAAAAATTCTTTATGAAGTTAAAgattgcatagaacttacaaattaaattgggagaattgaatttcctataatattgaagtatctca--accaaaatattgtta----cccatttctatttttca---ctttttaaaaaatgtatgaa-----------------------------------------acaaaatt- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111265968 516 + 115148730 tttttcagtataacattgaacttttaaaacaccttgactttttttgtgagtatggtatgaattagggatatatgttactttt-ttcccacattaacagttattcacctcattatactttattcagttggtctagactttttcctatatatttgccatctttattataatttaaatcagcatatacacctggatttatttttggtctctctacacagggctatctatcta-ttatttaattcttag-----agatttatgtggatatgtggtaggtatatgtcctcactcattgtgcttattttcaaca-ttttttccactatatttattt-------gtttttctcttatagatgaacctgagaataatctgtcaagcttctgataaaaattctttatgaagttaaagattgcatagaacttacagattaaattgggagaattgaatttcctgtaagattgaagtttctca--accaaaatattgtta----cccatttctatttttca---cttttttaaaaacatatgaa-----------------------------------------acaaaatt- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186405709 514 + 189454096 tttttcagtataacgttgaacttttaaaacaccttgactttttttttgagtatggtgtgaatta-agatatttgttccttttattcccacattaacagttattcacctcattataatttattcagttggtctagactttttcctatacatttgccacctttattataatttaaatcagcatatacacctggatttatttttggtctgtctacacagggctatcggtcta-ttgtttaattcttag-----agatttatgtggatatgtggtaggtatacgtcctcactcactgtgcttattttccaca-ttttttccactatatttattt--------tttttctcttctggatgaacc-aagaataatctgtcaagctgctgataaaaattctttataaagttaaagattgcatagaacttataaattaaattgggagaattgaatttcctatgacattgaagtttctca--accaaaatattttta----cccatttctatttttca---cttttttaaagatatgtgaa-----------------------------------------acaaaatt- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176021132 514 + 178775436 TTTTTCAGTATAACATTGAACTTTTAAAacaccttgactttttttttgagtatGGTGTGAATTA-AGatatttgttccttttattcCCACATTAACAGTTATTCACCTCATTATAATTTATTCAGTTGGTCTAGACTTTTTCCTATATATTTGCCacctttattataatttaaatcaaCATATACACCTGGATTTATTTTTGGTCTGTCTACACAGGGCTATCGATCTA-TTGTTTAATTCTTAG-----AGATTTATGTGGATATGTGGTAGGTATATGTCCTCACTCACTGTgcttattttcaaca-ttttttccactatatttattt--------tttttctcttctggatGAACC-AAGAATAATCTGTCAAGCTGCAgataaaaattctttataaagTTAAAGATTGCATAGAACTTATAAATTAAATTGGGAGAATTGAATTTCCTATGACATTGAAGTTTCTCA--ACCAAAATAttttta----cccatttctatttttca---cttttttaaagatatgtgAA-----------------------------------------ACAAAATT- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132863681 510 + 135778131 tttttcagtataacattgaacttttaaaacaccttgac----tttttgagtatggtgtgaatta-agatatttgttccttttattaccacattaacagttattcacctcattataatttattcagttggtctagactttttcctatatatttgccacctttattataatttaaatcgacatatacacctggatttatttttggtctgtctacacagggctatcgatcta-ttgtttaattcttag-----agatttatgtggatatgtggtaggtatatgtcctcactcactgtgcttattttcaaca-ttttttccactacatttattt--------tttttctcttctggatgaacc-aagaataatctgtcaagctgctgataaaaattctttataaagttaaagattgcatagaacttataaattaaattgggagaattgaatttcctatgacattgaagtttctca--accaaaatattttta----cccatttctatttttca---cttttttaaagatatgtgaa-----------------------------------------acaaaatt- i chlSab2.chr7 C 0 C 0 s mm10.chr8 84731130 490 - 129401213 TTTTTCTGAATAAAATTCCA-TTTGAAAACATTTAGACTTTTTT----AGTACAATGTAAGTTAATGACA-GTGTAACATAT-TTTCCAAATGGAAAG------------TTATAATCTAT--AGT-----CAGACTTTCCCTCATTCATTTGTCATCTTTCTTATAATCTAAAGCCATAAATGCATCTGTATTGATTGTTGTTGTCTCTGTTGAGGATTATTGATCTGCTTATCTGCTACTTAGTTCCTAGCTTTGCCTTGATATAAT-------TAGGTTCTCATTCACTGAACC----TTCAACATTCTCTTTCATTGTGCTAATTT-----------------------------------------ATCAGTCTGTTCAGACAAATCCTGTTTGAAGTTTAAGATTACATAAAGCTTATGGATTAAA-TGGGAGAATTGAACTC------ATATTAAATTTTGTCAGTGCCCATCTGTGACTATTAGCCTATTTCTATTTTTCA---CCCC---AAACATATAtgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCATCTTT- i mm10.chr8 I 4242 C 0 s canFam3.chr16 15731859 506 - 59632846 agttttgctatgatttttaacttttaaaacaataagacttttatt-tgaatatggtatgaattagaggtatt-----cttgt-ttcccaaatgaaatgttaattatctcattatgatttgtgaagttagtccagactatttc-tactcacttgctacctttatcatcatctaaatccatatattcacgtgggtttattgttcatccatctat------caattcattta-ttatttaattcttgg-----agctttatttagatatgtggtgggt-catg---tcactcactgtacttgtttttaacaatttttttca--acttttttttaaactatagttatctattatagataaatctgagaataatttgtaaagcagcttagaaaaattccatttgggatttaaaattgcatgaactttatgatttaaatcgagaggactg-atttgatataatattgagttttctca--accataatatttgta----cccatttccatttctcctatcttttttagacatgtac--a-----------------------------------------acaaaattt i canFam3.chr16 C 0 C 0 e calJac3.chr3 188246303 2720 - 190850796 I e rheMac3.chr5 181065248 2974 + 184069350 I a score=327386.000000 s hg38.chr4_KI270785v1_alt 62249 158 + 119912 tatagcctttt-taaatagaacttctactcttctcattaggattatttctcattttgtgtttttttgctgctattttgagt----tttttttttctctatttcattctaattgatggttagatggttagtagatggttagaaaattatttatttttatatgat s panTro4.chr4 190329642 150 + 193495092 tatagcctttt-taaatagaacttctactcttctcattaggattatttctcattttgtgtttttt-gctgctattttgagtaaggtttttttttctctatttcattctaattgatggttagatggttag-----------aaaattatttatttttatatgat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195303327 160 + 198332218 tatagcctttt-taaatagaacttctactcttcttattaggattatttctcatttttttgttttttgctgctattttgagtaa--gttttttttctctatttcattctaattgatggttagatggttagtagatggttagaaaattatttatttttatatgat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111266484 150 + 115148730 tatagcctttt-taaatagaacttctactcttctcattaggattatttctcattttttgtttttt-gctgctattttaagt-------ttttttctctatttcattttaattgatggttagatggttagtagatggttagaaaa----ttatttttatatgat i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186406223 155 + 189454096 tatagcccttt-taaatagaacct----tttactcattaggattatttctcattttttgtttttt-ggtgctattttgagtgc--attttttttctcaatttcattctaattgatggttagatggttagtaaatggttagaaaattatttatttttatatgat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176021646 155 + 178775436 TATAGCCCTTT-TAAATAGAACCT----TCTACTCATTAggattatttctcattttttgtttttt-gctgctattttgagtgt--gttttttttctcaatttcattCTAATTGATGGTTAGATGGTTAGTAAATggttagaaaattatttatttttatatgat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132864191 154 + 135778131 tatagcccttt-taaaaagaacct----tctactcattaggattatttctcattttttgtttttt-gctgctattttgagtgc--g-tttttttctcaatttcattctaattgatggttagatggttagtaaatggttagaaaattatttatttttatatgat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249023 129 - 190850796 tatagcctttt-taaataaaacttctactcttcacattaggattatttctcattttttgtttttt-gctgctattttgagtaagtttgttttttctgtattgagttctaattgatggttagatggttagta-------------------------------- i calJac3.chr3 I 2720 C 0 s mm10.chr8 84731620 107 - 129401213 CATAGCTTTTTCTGAAAAGAACT---AATTTTCCCATTAGCATTATTTTTTATTTTCAATATTTT--CTGCT-TTTTGAAAAC--------------------ACTTTATATTATATTTA----------------------------CTACTTTCCTGAG-- i mm10.chr8 C 0 C 0 s canFam3.chr16 15732365 149 - 59632846 tataaccttgt-ttattagacttc----ttttctcattgggattatttctcattttctgtttttttattggtatcgtgaatata-attattttcctcttatattttctagttggtaatta--------gtagattgttggaaaaatactgatttttatatgat i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181065248 2974 + 184069350 I a score=958606.000000 s hg38.chr4_KI270785v1_alt 62407 328 + 119912 gatattgaatctagccacttt---ga-------actcttgtgccatttta----taaaaatttgttttctt-----aagtatctag-----------------aaaaataatgaaatagtgtctgaaaataataaa---ttttgcctctgt------ttttcaatatttttacttttCTCCTCATTCTATTCTTA---------TTAGTGATGA----------AATATATATATAT----------GTA--------------------------TTCATTGTCTCTCATACAAAAAGTAGC-----CTTGACAATCTGAAAACAAAATAGATTTGCATTAAAATTGGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAACACCAATTGGTGCCTTTAAGATAGTATTAAAAATATACACATGG s panTro4.chr4 190329792 340 + 193495092 gatattgaatctagccacttt---ga-------actcttgtgccatttta----taaaaatttgttttcttgaattaagtatctag-----------------aaaaataatgaaatagtgtctgaaaataataaa---ttttgcctctgt------ttttcaatatttttacttttctcctcattctattctta----atatattagTGATGA----------AATATATATATAT--------ATGTA--------------------------TTCATTGTCTCTCATACAAAAAGTAGC-----CTTGACAATCTGAAAACAAAATAGATTTGCATTAAAATTGGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAACACCAATTGGTGCCTTTAAGATAGTATTAAAAATATACACATGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195303487 344 + 198332218 gatatcgaatctagccacttt---gA-------ACTCTTGTGCCATTTTA----TAAAAATTTGTTTTCTTGGATTAAGTATCTAG-----------------AAAAATAATGAAATAGTGTCTGAAAATAATAAA---TTTTGCCTCTGT------TTTTCAATATTTGTACTTTTCTCCTCATTCTAGTCTTA----ATATATTAATGATGA----------Aatatatatatatatatatatatgta--------------------------tTCATTGTCTCTCATACAAAAACTAGA-----CTTGACAATCTGAAAACAAAATAGAGTTGCATTAAAATTAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAA-----------AGGTCACTTTAACACCAATTGGTGCCTTTACGACAATATTAAAAATATACACATGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111266634 339 + 115148730 gatattgaatctggccccttt---ga-------actcttgtgccatttta----taaaaatttattttcttggattgagtatctag-----------------aaaaataatgaaataatgtctgaaaataataaa---ttttgcctctgt------ttttcaatatttgtacttttctcctcattctattctta----atatattAATGATGA----------Aatatatatatat----atatatgta--------------------------tTCATTGTCTCTCATACAAAAAGTAGA-----CTTGAAAATCTGAAAACAAAATAGATTTGCATTAAAAATAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAA-----------AGGTCACTTTAACACCAATTGGTGCCTGTAAGATAA-ATTAAAAATATACACATGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181068222 344 + 184069350 GATACTGAACCTGGCCACTTT---GA-------ACTCTTGTGCCATTTTA----TAAAAATTTATTTTCTTGGATTGAGTATCTAG-----------------AAAAATAGTGAAATAATGTCTGAAAATAATAAA---TTTTGCCTCTGT------TTTTCAATATTTGTACTTTTCTCTTCATTCTATTCTTAAATAATATATTAATGATGA----------AATATAGATATAT--------ATGTA--------------------------TTCATTGTCTCTCATACAAAAAGGAGA-----CTTGACAAGCTGAAAGCAAAACAGATTTGCATTAAAAACAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAATACCAATTGGTGCCTATAAGATAATGTTGAAAATATACACATGg i rheMac3.chr5 I 2974 I 329 s macFas5.chr5 186406378 344 + 189454096 gatactgaacctggccacttt---ga-------actcttgtgccatttta----taaaaatttattttcttggattgagtatctag-----------------aaaaatagtgaaataatgtctgaaaataataaa---ttttgcctctgt------ttttcaatatttgtactcttctcttcattctattcttaAATAATATATTAATGATGA----------AATATAGATATAT--------ATGTA--------------------------TTCATTGTCTCTCATACAAAAAGGAGA-----CTTGACAAGCTGAAAGCAAAACAGATTTGCATTAAAAACAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAATACCAATTGGTGCCTATAAGATAATGTTGAAAATATACACATGg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176021801 344 + 178775436 gataCTGAACTTGGCCACTTT---GA-------ACTCTTGtgccatttta----taaaaatttattttcttggattGAGTATCtag-----------------aaaaatagtgaaataatgtctgaaaataataaa---ttttgcctctat------ttttcagtatttgtacttttctcttcattctattcttaaataatatattaatgatga----------aatatagatatat--------atgta--------------------------ttcattgtCTCTCATACAAAAAAGAGA-----CTTGACAAGCTGAAAGCAAAACAGATTTGCATTAAAAACAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAATACCAATTGGTGCCTATAAGATAATGTTGAAAATATACACATGG i papAnu2.chr5 C 0 I 329 s chlSab2.chr7 132864345 344 + 135778131 gatactgaacctggccacttt---ga-------actcttgtgccatttta----taaaaatttattttcttggattgagtatctag-----------------aaaaagagtgaaataatgtctgaaaataataaa---ttttgcctctgt------ttttcaatatttgtacttttctcttcattctattcttaAATAATATATTAATGATGA----------AATATAGATATAT--------ATGTA--------------------------TTCATTGTCTCTCATACAAAGAGGAGA-----CTTGACAAGCTGAAAGCAAAACAGATTTGCATTAAAAACAGAAC----------------------------------------------CTAAAATGCAAGGATACTGAAA-------GTTAGGTCACTTTAATACCAATTGGTGCCTATAAGATAATGTTGAAAATATACACATGg i chlSab2.chr7 C 0 I 328 s calJac3.chr3 188249152 245 - 190850796 gatgtt------------------------------------------------tagaaaattatttttat------------------------------------------------------atgatattgaa---tctggctac------------------tttgAACTCTTGTGC-CATTTTA---------------TAAATGATGA----------AATATACATATAT--------ATGTA--------------------------TTCATTGTCTCTCATACAGAAAGGAGA-----CTTGATAATCTGCAAACAAAATAGATTTGCATTAAAAATAGAAC----------------------------------------------CTAAAATGGAAGGATACTGAAA-------GTTAGATCACTTTAACCCCAATTGGTGCCTGTAAGGTAATATTGAAAATATACATATGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84731727 386 - 129401213 GATATTGGATGTAGCCACTTT---GATGGATGGATTCTTGCTTGTTTTTGT---TATGTGTGTATAGCTTTGGATTGAGTG---AG-----------------AGAA------CAGTAACATCAGTGAATGCTCAAACTTTATGTTTCtatataatatatataatatttaCACTTTATTTCATAGTCTGTT-TTACAGAATACAC---TTGTGG----------AGTGTGTGTATGT--------GTGTGTGCTGTATGTGCGCACACACACACATTTCACAATCTGTTAAAAAGAAAAAAGAAAAAGCACCAGATTTCGAAGCAAAAATAGATTTTCATTAAAAATAAAAC----------------------------------------------CAGAAATCCAAGGACAATGAAGGAATTGTGACTTGTCATTTCGACACTAACTGGTGCCTACAGGGTAAGAGCAGAAGAGTGTATGTGA i mm10.chr8 C 0 I 1 s canFam3.chr16 15732514 429 - 59632846 gacactgaatctggctactttaaaga-------attcttgtaactttttatatatataaatttactttcttggattGAGCAGCTAGGCAAATAATGAAATAATACAAATAGTGAAATAATATCTATAAATAATGAA------AGTATCTCT------TTTATAATATTCACACCCTACTCCTTATTCTGTTCCTACAGAACACATtgatgatgatgatgatgatgatgTGTTTGTGT--------GTGTGGGGTGTGTATATGTGT----------TGCATGGTCTTTTATACA-AAATTGGA-----CTTGGCAATCTGAGAACAAAATAGACTTACATTaaaaaaggaacaaaacaaaaaaacaaaacaaaaaaacaaaaaaaaattaaaaaggaacaaaaaTACAAGAAGAGTGAAAA------GGTAGGGCGCTTT--------TTGGTGCCTATAAAGCAAAATTGAAAGCAAACATATGG i canFam3.chr16 C 0 I 1 a score=162343.000000 s hg38.chr4_KI270785v1_alt 62735 58 + 119912 TATTTGCCAAATTTTGAATATAGGAGCATATTGTGCTTTGTACATACTTTAAAATAGC s panTro4.chr4 190330132 58 + 193495092 TATTTGCCAAATTTTGAATATAGGAGCATATTGTGCTTTGTACATACTTTAAAATAGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195303831 58 + 198332218 TATTTGCCAAATTTTGAATATAGGAGCATATTGTGCTTTGTACATACTTCAAAATAGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111266973 58 + 115148730 TATTTGCCAATTTTTGAATATAGGAGCATATTATGCTTTGTACATACTTTAAAATAGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181068895 58 + 184069350 TATTTGCCAAGTTTTGAATATAGGAGCATATTGTGCTTTGTACATACTTTAAAATAGC i rheMac3.chr5 I 329 C 0 s macFas5.chr5 186406722 5 + 189454096 -----gccaa------------------------------------------------ i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176022474 58 + 178775436 TATTTGCCAAGTTTTGAATATAGGAGCATATTGTGCTTTGTACATactttaaaatagc i papAnu2.chr5 I 329 C 0 s chlSab2.chr7 132865017 58 + 135778131 TATTTGCCAAGTTTTGAATATAGGAGCATGTTGTGCTTTGTACATACTTTAAAATAGC i chlSab2.chr7 I 328 C 0 s calJac3.chr3 188249397 58 - 190850796 TATTTGCCAAATTTTGAATATAGGAGCACATTGTGCTTTGCACATACTTTAAAATAGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84732114 58 - 129401213 TGTTTGATAAATCTTGAGTAGTAGATCATAATATGCTTTGAATAGGGCTTAAGATGAC i mm10.chr8 I 1 I 24 s canFam3.chr16 15732944 40 - 59632846 TGTTTGTCAAATTTTGAATATAAGAACATAATGTGCTTTA------------------ i canFam3.chr16 I 1 C 0 a score=18407.000000 s hg38.chr4_KI270785v1_alt 62793 7 + 119912 CACAGAT s panTro4.chr4 190330190 7 + 193495092 CACAGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195303889 7 + 198332218 CACAAAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267031 7 + 115148730 CACAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181068953 7 + 184069350 CACAAAT i rheMac3.chr5 C 0 C 0 s papAnu2.chr5 176022532 7 + 178775436 tacaaat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865075 7 + 135778131 CACAAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249455 7 - 190850796 CACAAGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15732984 7 - 59632846 CACATAT i canFam3.chr16 C 0 C 0 e mm10.chr8 84732172 24 - 129401213 I e macFas5.chr5 186406727 0 + 189454096 C a score=314397.000000 s hg38.chr4_KI270785v1_alt 62800 118 + 119912 ggctgggcgaggtggcttttgcttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacgtggtgaaaccccatctcta s panTro4.chr4 190330197 118 + 193495092 ggctgggcgaggtggctcttgcttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacgtggtgaaaccccatctcta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195303896 118 + 198332218 ggctggacgaggtggctctcgcttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagtctgaccaacgtggtgaaaccccatctcta i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267038 118 + 115148730 ggctgggtgaggtggctcttgcttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctcta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181068960 118 + 184069350 gactgggcgaggtggctctcacttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacatgatgaaatcccatctcta i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186406727 110 + 189454096 ------gcgtggtgactcatgcttgtaatcccaatactttgggaggccta-------------------catgggtggatcac--gaggtcaggaaatcgagaccatcctgtctaacacagtgaaaccctgtctcga i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176022539 118 + 178775436 gactgggcgaggtggctctcacttgtaatcccagcacttaaggaggccta-------------------ggtgggcagatcacctgaggtcaggagtttgagaccagcctgactaacatgatgaaatcccatctcta i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865082 118 + 135778131 gactgggcgaggcgtctctcacttgtaatcctagcacttaaggaggtcta-------------------ggtgggcagatcacctgcggtcaggagtttgagaccagcctgaccaacatgatgacatcccatctcta i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249462 137 - 190850796 ggctgggggatgtgactcttgcctgtaatcccagcacttagggagacctgcattcttgcctgtaatctcagcacttagaactcctgaggtcaggagtttgagaccagcctgatcaacatgatgaaaccccatctcta i calJac3.chr3 C 0 C 0 e canFam3.chr16 15732991 0 - 59632846 C e mm10.chr8 84732172 24 - 129401213 I a score=18513.000000 s hg38.chr4_KI270785v1_alt 62918 9 + 119912 ctaaaaat-a s panTro4.chr4 190330315 9 + 193495092 ctaaaaat-a i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304014 9 + 198332218 ctaaaaat-a i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267156 9 + 115148730 ctaaaaat-a i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069078 8 + 184069350 ctaaaagt-- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186406837 10 + 189454096 ccaaaaatac i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176022657 8 + 178775436 ctaaaagt-- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865200 8 + 135778131 ctaaaagt-- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249599 9 - 190850796 ctaaaaat-a i calJac3.chr3 C 0 C 0 s canFam3.chr16 15732991 9 - 59632846 CTAAAAAT-A i canFam3.chr16 C 0 C 0 e mm10.chr8 84732172 24 - 129401213 I a score=266479.000000 s hg38.chr4_KI270785v1_alt 62927 119 + 119912 caaaaattagccgggtgtggtggtgcatg----------cttgtaatcctagctactcaggaggctgaggcacaagaatcgtttgaacccaggaggtggatgttgcagtgagcctagatagggctgt-------ca s panTro4.chr4 190330324 119 + 193495092 caaaaattagccgggtgtggtggtgcatg----------cctgtaatcctagctactcaggaggctgaggcacaagaatcatttgaacccaggaggtggatgttgcagtgagcctagatagggctgt-------ca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304023 119 + 198332218 caaaaattagccggatgtggtggtgcatg----------cctgtaatcctagctactcaggaggatgaggcacaagaatcatttgaacccaggaggtggatgttgcagtgagcctagatagggctgt-------ca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267165 119 + 115148730 caaaaattagctgggtgtggtggtgcatg----------cctgtaatcctagctactcaggaggctgaggcacaagaatcatttgaacccaggaggtggatgttgcagtgagccgagatagggctgt-------ca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069086 95 + 184069350 ------------------------gcatg----------cctgtaatcctagctactcaggaggctggagcacaagaatcgtttgaacccaggaggtggaggttgctgtgagtcaagatagggctgt-------ca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186406847 126 + 189454096 gaaaaattagccag----------gcatggtggcgggcacctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacctgggaggcagagattgcagtgagccgagattgcaccattgtactcca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176022665 95 + 178775436 ------------------------gcatg----------cctgtaatcctagctactcaggaggctggagcacaagaatcatttgaacccaggaggtggaggttgctgtgagccaagatagggctgt-------ca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865208 95 + 135778131 ------------------------gcatg----------cctgtaatcctagctactcaggaggctggagcacaagaatcgtttgaacccaggaggtggaggttgctgtgagtcaagatagggctgt-------ca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249608 126 - 190850796 caaaaattagcttggtgtggtggtgctca----------cctgtaatcccaggtatacaggaggctgaggtacgagaatcatttgaacccaggaggtggaggttgcagtgagccaagatagggctgctgtactcca i calJac3.chr3 C 0 C 0 e canFam3.chr16 15733000 0 - 59632846 C e mm10.chr8 84732172 24 - 129401213 I a score=89053.000000 s hg38.chr4_KI270785v1_alt 63046 36 + 119912 gcctgagtgacagagtgagactctgtctcaaacaaa s panTro4.chr4 190330443 36 + 193495092 gcctgagtgacagagtgagactctgtctcaaacaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304142 36 + 198332218 gcctgggtgacagagtgagactctgtctcaaaaaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267284 36 + 115148730 gcctgggtgacagagtgagactctgtctcaaaaaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069181 36 + 184069350 gcctgggtgacagagtgagactctgtctcaaaataa i rheMac3.chr5 C 0 I 22 s macFas5.chr5 186406973 36 + 189454096 gcctcggcaacagagcgagactctgtctcaaaaaaa i macFas5.chr5 C 0 I 460 s papAnu2.chr5 176022760 36 + 178775436 gcctgggtgacagagtgagactctgtctcaaaaaaa i papAnu2.chr5 C 0 I 21 s chlSab2.chr7 132865303 36 + 135778131 gcctgggtgacagagtgagactctgtctcaaaaaaa i chlSab2.chr7 C 0 I 27 s calJac3.chr3 188249734 32 - 190850796 gcctgggtgacagagtgacaccctgtcacata---- i calJac3.chr3 C 0 I 1 s canFam3.chr16 15733000 4 - 59632846 GCCA-------------------------------- i canFam3.chr16 C 0 C 0 e mm10.chr8 84732172 24 - 129401213 I a score=194021.000000 s hg38.chr4_KI270785v1_alt 63082 65 + 119912 caaataaaaaa---aGCCACAAATGCTAATAA----AATAATACATTCCTAAAAGATACTGTTTAATAGTTT s panTro4.chr4 190330479 64 + 193495092 caaacaaaaaa----GCCACAAATGCTAATAA----AATAATACATTCCTAAAAGATACTGTTTAATAGTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304178 64 + 198332218 aaaaaaaaaaa----GCCACAAATGCTAATAA----AATAATACATTCCTAAAAGATACTGTTTAATAGTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267320 68 + 115148730 aaaaaaaaaaaaaaaGCCACAAATGCTAATAA----AATAATGCATTCCTAAAAGATACTGTTTAATAGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069239 64 + 184069350 aGAAGAAAAAA----GCCACAAATGCTAGTAA----AATAATACATTCCTAAAAGATACTGTTTAATGGTTT i rheMac3.chr5 I 22 C 0 s macFas5.chr5 186407469 64 + 189454096 agaagaaaaaa----GCCACAAATGCTAGTAA----AATAATACATTCCTAAAAGATACTGTTTAATGGTTT i macFas5.chr5 I 460 C 0 s papAnu2.chr5 176022817 64 + 178775436 agaagaaaaaa----gccacAAATGCTAGTAA----AATAATACATTCCTAAAAGATACTGTTTAATGGTTT i papAnu2.chr5 I 21 C 0 s chlSab2.chr7 132865366 64 + 135778131 agaagaaAAAA----GCCACAAATGCTAGTAA----AATAATACATTCCTAAAAGATACTATTTAATGGTTT i chlSab2.chr7 I 27 C 0 s calJac3.chr3 188249767 64 - 190850796 acacaaaaaaa----GCCACAAATGCTAATAA----AATAATACATTCCTACAAGGTACTGTTTAATAATTT i calJac3.chr3 I 1 C 0 s canFam3.chr16 15733004 52 - 59632846 -------------------CAAATAATAAAAAAAATAATAGTACATG-CTAAGAGACACTGTTTGATAATTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84732172 24 - 129401213 I a score=613586.000000 s hg38.chr4_KI270785v1_alt 63147 193 + 119912 CTCCTAAAAGATACTGTTTAATAATTACTCCTATTATTCTAAGAACATTGGCATTAGAATTTAGAACATAATTAAC----------------AGACTCTTCTTCCAAAAATGTGTAACAATGA--------GAGGTA--ATAGTGAATGG--------------------------------------CAAATGTACAGT--------------GTGAATGAGAGGCAAGAGTACCAGGACAGACC----TTGTTTAAATTATGTAATACATTTT s panTro4.chr4 190330543 193 + 193495092 CTCCTAAAAGATACTGTTTAATAATTACTCCTATTATTCTAAGAACATTGGCATTAGAATTTAGAACATAATTAAC----------------AGACTCTTCCTCCAAAAATGTGTAACAATGA--------GAGGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GTGAATGAGAGGCAAGAGTACCAGGACAGACC----TTGTTTAAATTATGTAATACATTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304242 193 + 198332218 CTCCTAAAAGATACTGTTTAATAATTACTCCTGTTATGCTAACAACATTGGCATTAGAGTTTAGAACATAATTAAC----------------AGACTCTTCCTCCAAAAATATGTAACAATGA--------GAGGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GTGAATGAGAGGCAAGAGTACCAGGACAGACC----TTGTTTAAACTATGTAATACATTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267388 193 + 115148730 CTCCTAAAAGATACTGTTTAATAATTACTCCTGTTATTGTGACAACATCGGCATTAGAATTTAGAACATAATTAAC----------------AGACTCTTTCTCTAAAAATATGTAACAATGA--------GAGGTA--TTAGTGAATGG--------------------------------------CAAATGTACCGT--------------GTGAATGAGAGGCAAGAGTACCAGGACAGACC----TTGTTTAAATTATGTAATACATTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069303 193 + 184069350 CTCCTAAAAGATACTGTTTAGTAATTACTCCTATTATTCTAACAACATTGGTATTAGAATTTAGAACATAATTAAG----------------AGAGTCTTCCTCCAAAAATATGTAACAATGG--------GATGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GAGAATGAGAGGCGAGAGTACCAGGACAGACC----TTGTTTAAATTATGTAATACATTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186407533 193 + 189454096 CTCCTAAAAGATACTGTTTAGTAATTACTCCTATTATTCTAACAACATTGGTATTAGAATTTAGAACATAATTAAG----------------AGAGTCTTCCTCCAAAAATATGTAACAATGG--------GATGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GAGAATGAGAGGCGAGAGTACCAGGACAGACC----TTGTTTAAATTATGTAATACATTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176022881 193 + 178775436 CTCCTAAAAGATACTGTTTAGTAATTACTCCTATTATTCTAACAACATTGGCATTAGAATTTAGAACATAATTAAG----------------AGAGTCTTCCTCCAAAAATATGTAACAATGG--------AACGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GAGAATGAGAGGCGAGAGTACCAGGACAGACC----TTGTTTAAattatgtaatacatttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865430 193 + 135778131 CTCCTAAAAGATACTGTTTAGTAATTACTCCTATTATTCTAACAACATTGGCATTAGAATTTAGAACATAATTAAG----------------AGAGTCTTCCTCCAAAAATATGTAACAATGG--------GACGTA--TTAGTGAATGG--------------------------------------CAAATGTACAGT--------------GAGAATGAGAGGCGAGAGTACCAGGACAGGCC----TTGTTTAAATTATGTAATACATTTA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188249831 176 - 190850796 CTC------------------------------TTATTCTAACTACATTGGCATGAGAATTTAGAATATAATTAAG----------------AGACTCTTCCTCCAAATATATGTGACAATGA--------GATGTA--TCAGTCACTGG---------------------------------------ACATGAATAGTCTAGTCCAGGAAAAGCAAATGAGAGGCAAGAGTACCAGGACAGATC----TCGTTTAAATTATGTAATATGTTTA i calJac3.chr3 C 0 I 165 s mm10.chr8 84732196 225 - 129401213 CTCATGGAAGATAGAATTTAGT---------CATTATTCTGCTAACACTGCTAGAAGAATTTTTAACATAATTGAGAAAAGCTGTACTCTAAAAAGCTTTCCTCCAAAAACATATAACAAGAACTGTGCCCGACCTAGTTCAGGGAAGGAA---------------------------GATGAATACCCAAACACACAGT--------------GAGAATCAGAGCCAGGTACATCAGAGCAGATCTGAATCGTCTAAGTCACATAATACACATC i mm10.chr8 I 24 C 0 s canFam3.chr16 15733056 203 - 59632846 CTC------------------TAATTATTC--ATTATGCTGACAATATTGCTAAAGGAATTTTGAGCAT-----------------------AGACTCTTCCTTCAAAAATATGTAGCAATGA--------AATGTA--TTAGTCATTGGGCATGAATGGCCTAGCCTAGAAAAAGACAATGAATAGACAAATATGTAAT--------------GAGAGCATGAGTCAAGAGAGACAGGACCAACC----ATGT-TAAATTAAGTAATACATTTT i canFam3.chr16 C 0 C 0 a score=297113.000000 s hg38.chr4_KI270785v1_alt 63340 76 + 119912 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTCTGTTTGTTTAAAT-TTTTTGGCAGATAAA s panTro4.chr4 190330736 76 + 193495092 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTGTGTTTGTTTAAAT-TTTTTGGCAGATAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304435 76 + 198332218 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTCTGTTTGTTTAAAT-TTTTTGGCAGATAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267581 76 + 115148730 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAGTGACTTCTGTCTGTTTAAAT-TTTTTGGCAGATAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069496 76 + 184069350 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTCTGTTTGTTTGAAT-TTTTTGGCAGATAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186407726 76 + 189454096 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTCTGTTTGTTTGAAT-TTTTTGGCAGATAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176023074 76 + 178775436 aaaaatccacagaGAATAAACATGAGCTTAACTAAATAAAATGACTtctgtttgtttaaat-tttttggcaGATAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865623 76 + 135778131 AAAAATCCACAGAGAATAAACATGAGCTTAACTAAATAAAATGACTTCTGTTTGTTTAAAT-TTTTTGTCAGATAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188250172 76 - 190850796 aaaaaTTCGCAGAGAATAAACATAAACTTAACTAAATAAAATGACATCTGTTTGCTTAAAT-TTTTTGGCAGATAAA i calJac3.chr3 I 165 C 0 s mm10.chr8 84732421 71 - 129401213 -AAAATTCACAACAAGTACACATGCGATTAATGAAATGGATT---CCCCATGTGTCTAGA--TTTCTGGCAGATAAA i mm10.chr8 C 0 I 104 s canFam3.chr16 15733259 77 - 59632846 AAAAATCCAAAAAGGATAGATATGAACTTAACCAAGGACACCAATTTCTGCTTGGTTGGATGTTTTTGGTAGATAAA i canFam3.chr16 C 0 C 0 a score=246523.000000 s hg38.chr4_KI270785v1_alt 63416 78 + 119912 AATTAAGTGATacaatagtca------ttctgggtggtgtgagatggtggta-tcttattgtggttttgatttgcatttctctaa s panTro4.chr4 190330812 78 + 193495092 AATTAAGTGATACaatagtca------ttctgggtggtgtgagatggtggta-tcttattgtggttttgatttgcatttctctaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304511 78 + 198332218 AATTAAGTGATACaatagtca------ttctgggtggtgtgagatggtggta-gcttattgtggttttgatttgcatttctctaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267657 78 + 115148730 AATTAAGTGATACaatagtca------ttctgggtggtgtgagatggtggta-tctgattgtggttttgatttgcatttctctaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069572 78 + 184069350 AATTAAGTGATACaatagtta------ttctgagtggtgcgagatggtggta-tcttattgtggttttgatttgcatttctctaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186407802 78 + 189454096 AATTAAGTGATACaatagtta------ttctgagtggtgcgagatggtggta-tcttattgtggttttgatttgcatttctctaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176023150 78 + 178775436 AATTAAGTGCTACAACACtca------ttctgagtggtgtgagatggtggta-tcttattgtggttttgatttgcatttctctaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865699 78 + 135778131 CATTAAGTGATACaacagtca------ttctgagtggtgtgagatggtggta-tcttattgtggttttgatttgcatttctctaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188250248 78 - 190850796 AATTAAATGACACaatagcca------ttctgataggtgcaagacggtggta-tcttattgtggttttcatttgcatttctctaa i calJac3.chr3 C 0 C 0 s canFam3.chr16 15733336 82 - 59632846 AATGAAATGATGTTATTTTCATGTTGCTTTTGAGAGCAGCACTAAGGTGAAAGTCTCATT---ATTTTGACTCGtttttttttaa i canFam3.chr16 C 0 I 235 e mm10.chr8 84732492 104 - 129401213 I a score=5672142.000000 s hg38.chr4_KI270785v1_alt 63494 1998 + 119912 tgatcaaagatattgagcttttt-ttcatatgcctgtagctgcatgtatttcttcttttgaaaagtgtctgttcatgtcctttgcccactctttaatgagattgtttgtttttattcttgtaaatttatttaagttcctt----atagattctggatacaagacctttgacagatgcatagtttgcaaatattttctcccattctttatgtctgtttactctactgatagtttcttttgctgtgcagaagctctttaatttgatgagatcccatttttcaattttttgttttgttgcaattgcttttggagacttcaataacagacgctgccaaggttgtggagaaaagggaacacttatgcattgttaaggggagtgtaaattagttcaaccattgtgg-aagcagtgtgacaatttctcaaagagctaaaaatagaactgccattcaacccagcaatcccattactgggtatgcacccaaacgaatatacattattctgtcacaaagacacatgcatgcagatgtccattgcagcaccattcacaataacaaagacatggaattggtgtaaatgcccatctatggtagattggatgaagaaaatgtggtacatataccccgtggaatactatgcagtcataaaaaagaacaagatcgtgttctttgcaggaacatggctggagctggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtaagaacacctgtacaccaagaggggtacaacacacactgggacttacctgagggtcagaattgggaggagg-gaaaggatcagaaaaa-acaactattgggtactgggcttagtacctgggtgatgaaataatctgtacaacaaa-ccttcatgatatgagtttacctatataacaaacctgaacatatacccctgaacctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACAT---ttattattattattattactatttttTaaagaacctgctgggaatgtattgcaagtgcgttgtaactgtagttcacctacttaccttaacaatattgaggttttctgactagtgaacatggtatatctttccatttatctaggttttctttaatttctctcagcaagttttgtagttttcagtgtacaggtattgtacatattttg-----tttaaccatatgtaatttatactttgtatgctatttccaattttcattaatagcatataaaaatataatagatttttaaatattgaccacatatcttgtggccttgctaaattcatgtattagtccat-tttt---aaaaataaatcctattcttttaattttttta-taatttcttataaattctatttttcctgcatagaagatctgtcctct------------gttatttcatcctttcc-----aaAAAAAAATTCAGTGATGTGATGTTGTCCATGTTGCTCTGAGGGCATCACTACGATGGAAAGCACATCCTCCCGATTTTCAACGTGGAGAGATGTCCCATGTAACCTATTCCTTGtgaaagcaacccaaaagtcctatagacacttgcttttggataaacacaggaatggaaccttctgctgtt-aaagtttgaaacttatgtttgttttatctgagttccttcctcaggaaactaccttcaggcctctcacaaaaagcatcaaagaactgaacccagatcaccacaccggttgccggacccctcattcaccaggatcgcttccttgctcctcccgagttcctgttttcttattcattcttacatttcttggctgctatataatcccctggttttaatcagtcaggaagatggatttgagactg---cagcatctcctcagctgcagcacccaattaaagccttctcccttggcaagactcatcgtctcagtgactggctttctttgcagtgagt-gcaggactgagactgaacccttggtgttttggtaaca s panTro4.chr4 190330890 1993 + 193495092 tgatcaatgatattgagcttttt-ttcatatgcctgtagctgcatgtatttcttcttttgaaaagtgtctgttcatgtcctttgcccactctttaatgagactgtttgtttttattcttgtaaatttatttaagttcctt----atagattctggatacaagacctttgacagatacatagtttgcaaatattttctcccattctctatgtctgcttactctactgatagtttcttttgctgtgcagaagctctttaatttgatgagatcccatttgtcaattttttgttttgttgcaattgcttttggagacttcaataacagacgctgccaaggttgtggagaaaagggaacacttatgcattgttaaggggagtgtaaattagttcaaccattgtgg-aagcagtgtgacaatttctcaaagagctaaaaatggaactgccattcaacccagcaatcccattactgggtatgcacccaaacgaatatacattattctgtcataaagacacatgcatgcatatgtccattgcagcaccattcacaataacaaagacatggaatccatgtaaatgcccatctatggtagattggatgaagaaaatgtggtacatataccccatggaatactatgcagtcataaaaaagaacaagatcatgttctttgcaggaacatggctggag------gccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtgagaacacctgtacaccaagaggggaacaacacacactgggacttacctgagggtcagaattgggaggagg-gaaaggatcagaaaaa-acaactattgggtactgggcttagtacctgggtgatgaaataatctgtacaacaaa-cctccatgatatgagtttacctatataacaaacctgaacatatacccctgaacctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACAT---ttattattattattattactattTTTTaaagaacctgctgggaatgtattgcaagtgcattgtaactgtagttcacctacttaccttaacaatattgaggttttctgactggggaacatggtatatctttccatttatcgaggttttctttaatttctctcagcaagttttgtagttttcagtgtacaggtattgtacttattttg-----tttaaccatatgtaatttatactttgtatgctatttccaattttcattaatagcatataaaaatataatagatttttaaatattgaccacatatcttgtggccttgctaaattcatatattagtccat-tttt---aaaaataaatcctattcttttaattttttaaataatttcttataaattctatttttCCTGCATAGAAGATCTGTCCTCT------------GTTATTTCATCCTTTCC-----AAAAAAAAATTCAGTGATGTGATGTTGTCCATGTTGCTCTGAGGGCATCACTACGATGGAGAGCACATCCTCCCAATTTTCAACATGGAGAGATGTCCCATGTAACCTATTCCTTGtgaaagcaacccaaaagtcctatagacacttgcttttggatatacataggaatggaaccttctgctgtt-aaagtttgaaacttatgtttgttttatctgagttccttcctcaggaaactaccttcaggcctctcacaaaaagcatcaaagaactgaacccagatcaccacaccggttgccggacccctcattcaccaggatcgctttcttgctcctcccaagttcctgttttcttatacattcttacatttcttggctgctatataatcccctggttttaatcagtcaggaagatggatttgagactg---cagcatctcctcagctgcagcacccaattaaagccttctcccttggcaatactcatcgtctcagtgactggccttctttgcagtgagt-gcaggactgagactgaacccttggtgttttggtaaca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195304589 1996 + 198332218 tgatcaatgatattgagcttctt-ttcgtatgcctgtggctgcatgtatttcttcttttgaaaagtgtctgttcatatcctttgcccactttttaataagattgtttgtttttattcttgtaaatttatttaagttctgt----atagattctggatacaagacctttgacagatgcatagtttgcaaatattttctcccattctctatgtctgtt-----tactgataatttcttttgctgtgcagaagctctttcatttgatgagatcccatttgtcaattttttgttttgttgcaattgtttttggagacttcaataacagacgctgccaaggttgtggagaaaagggaacacttatgcattgttaaggggagtgtaaattagttcaaccattgtgg-aagcagtgtgacaatttctcaaagagctaaaaatagaactgccattcaacccagcaatcccattactgggtatgcacccaaacgaatatatattattctgtcataaagacacatgcatgcatatgtccattgcagcaccattcacaataacaaagacatggaatcggtgtaaatgcccatctatggtagattggatgaagaaaatgtggtacatataccccatggaatactatgcagttataaaaaagaacaagatcatgttctttgcaggaacatggctggagctggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggaggtaaatagtgagaacacctgtacaccaagaggggaacaacacacactgggacttacctgagggtctgaattgggaggagg-gaaaggatcagaaaaa-acaactattgggtattgggcttagtatctgggtgatgaaataatctgtacaacaaa-cctccatgatatgagtttacctatataacaaacctgaacatatacccctgaacctaagataaaagttataaataaaT-----AAATAAAATTCAAGTGTATGAAACAT---TTATTATTATTAGGAGTAGTATTTTTTaaagaacttgctgggaatgtattgcaagtgcattgtaactgtagttcacctacttaccttaacaatactgaggttttctgactggtgaacatggtatatctttccatttatctaggttttctttaatttctctcagcaagttttgtagttttcagtgtacaggtattgtacatattttgttaaatttaaccatatgtaatttatactttgtatgctatttccaattttcattcatagcatataaaaatataatagatttttaagtattgaccacatatcttatggccttgctaaattcatgtattagtccGt-ttttttaaaaaataaatcctattcttttaattttttaa-taatttcttataaattctatttttCCTGCATAGAAGATCTGTCCTGT------------GTTATTTCATCCTTTCC-----AAAAAAAAATTCAGTGATGTGATGTTGTCCATGTTGCTCTGAGGGCATCACTATGATGGAGAGCACGTCCTCCCGATTTTCAACGTGGAGAGATGTCCCATGTAACCTATTCATTGtgaaagcaacccaaaagtcctatagacacttgcttttggataaacataggaatggaaccttctgctgtt-aaagtttgaaacttatatttgttttatctgagttctttcctcaggaaactaccttcaggcctctcacaaaaagcatcaaagaactgaatccagatcaccacactggtcgccggacccctcattcaccaggatcgcttccttgctcttcccgagttcctgttttcttatacattcttacatttcttgtctgctatataaacccctggttttaatcggtcaggaagatggatttgagactg---cagcatctcctcagctgcagcacccaattaaagccttctcccctggcaatactcatcgtctcagtgactggctttctgtgcagtgagt-gcaggactgagactgaacccttggtgttttggtaaca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111267735 2014 + 115148730 tgatcaatgatattgagcttctt-ttcatatgcctgtagctgcatgtgtttcttctcgtgaaaagtgtctgttaatgtcctttgcccactttttaatgggattgcttgtttttattcttgtaaatttatttaagttcctt----atagattctggatacaagacctttgacagatgcatagtttgcaaatattttctcccattctctgtgtctgtt-----tactgatagtttcttttgctgtgcagaagctctttaatttgattagatcccatttgtcaattttttgttttgttgcatttgcttttggagacttcaacaacagatgctgccaaggttgtggagaaaagggaacacttatgcattgttaaggggagtgtaaattagttcagccattgtggaaagcagtgtgacaatttctcaaagggctaaaaacagaactgccattcaacccagcaatcccattactggatatgcacccaaacgaatatatattcttctgtcataaagacacatgcatgcatatgtccactgcagcaccattcacaattacaaagacatggaatcggtgtaaatgcccatctatggtagactggatgaagaaaatgtggtacatataccccatggaatactatgcagtcataaaaaagaacaagatcatgttctttgcaggaacatggctggagctggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttcccactgataaatgggagctaaatagtgagaacacatgtacaccaagaggggaacaatatacactgggacttacctgagggtcagaattgggaggagg-gaaaggatcagaaaaacacaactattgggtactgggcttagtacctgggtgatgaaataatctgtacaacaaa-cctctatgatgtgagtttacctatataacaaacctgaacatatacccctgaacctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACATttattattattattattattactatCTTTTaaagaacttgctgggaatgtattgcaattgtattgtaactgtagttcacctatttaccttaacaatattgaggtttcctgactggtgaacatggtatatctttccatttatctaggttttctttaatttctctcagcaagttttgtagttttcagtgtacaggtattttacatattttgttaaatttaaccatatgtaatttatactttgtatactatttccgattttcattcatagcacataaaaatataatagatttttaaatattgaccacatgtcctatggccttgctaaattcatgtattagttcat-tttt---aaaaataaatcctattcttttaattttttaa-taatttcttataaattctatttttcctgcatagaagatctgtcctctgtaaataaaaacgttatttcatcctttcc------aaAAAAAATTCAGTGATGTGATGTTGTCCATGTTGCTCTGAGTGCATCACTACGATGGAGGGCACATCCTCCCAATTTTCAACGTGGAGTTATGTCCCATGTAACCTATTCATTGtgaaagcaacccaaaagtcctatagacacttgcttttggataaacataggaatggaaccttctgctgtt-aaagtttgaaacttatgtttgttttatctgagttcctttctcaggaaactaccttcaggcctctcacaaaaagcatcaaagagctgaacctaggtcaccacactggatgccagacccctcattcaccaggattgcttccttgctcctcctgagttcctgttttcttatacattcttacatttcttggctgctatataaacccctggttttaatcagtcaggaagatggatttgagactg---cagcatctcctcagctgcagcacccaattaaagccttctcccttggcaatactcatcatctcagtgattggctttctgtgcagcgagc-gcaggaccgagactgaacccttggtgtcttggtaaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181069650 1937 + 184069350 tgatcagtaatgttgagcttttttttcatatgcctgtagctgcatgtatttcttcttttgaaaagtgtctgggcatgtcctttgtccactttttaatgcgattgtttgtttttattcttgtaaatttatttaggttcctt----atagattctggatacaagacctttgtcagatgcatagtttgcaaatattttc------------------------------------------------------------------------tcccatttgtcagttttttgttttgttgcaattgcttttgGAGACTTCAGtaacagatgctgccaagatcgtggagaaaagggaacacttatgcattgttaaggggagtgtgaattagttcaaccatggtggaaagcagtgtgataatttctcaaagagct-aaaatagaactgccattcaacccagcaatctcattactgggtatgcacccaaacgaatatatattgttctgtcataaagacacatgcatgcatatgtccattgcagcactattcacaataccaaagacgtggaatcgatgtaaatgcccatctatggtagagtggatgaagaaaatgtggtacatataccccacggaatactatgcagtcatagaaaagaacaagatcatgtcctttgcagaagcatggatggagctggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtgagaacacatgtacaccaagaggggaacaacacacactgggacttacctgagggtcagaattggga-gagg-gaaaggatcagaaaaa-acaactg-tgggtagtgggcttagtacctgggtgatgaaataatctgtgcaacaaa-cccccatgatatgagtttacctatgtaacaaacctgaacatataccccggagcctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACAT---ttattattattattattactat-ttttaAAGGacttgctgggaatgtattgcaattgcattgttactgtcgttcacctatttaccttaacaatattgaggttttccaactggtgaatatggtatatcttcccatttatccaggttttctttaatttctctcagcaagatttgtagttttcagtgtacaggtattgtacctattttgttaaatttaaccatatgtaatttatactttgtatgctatttcctattttcatccatagcatataaaaatataatagatttttaaatattgaccacatatcctgtggccttgctaaattcatgtattagtttgt-tttt---tgaaataaatcctattcttttaatttttaaa-taatttcttataaattctattttttctgcatagaagatctgtcctgtgtaaataaaaacattatttcatcctttcc-----aaAAAAAAAATCAGTGATGTGA---TGTCCATGTTGCTCTGAGGGCATCACTAGGATGGAGAGCACGTCCTCCCAATTTTCAGCGTGGAGATATGTCCCATGTAACCTATTCATTGtgaaggcaacccaaaagtcctatagaca-gtgcttttggacaaacataggaatggaaccttctgctgtt-gaagtttgaaactggtatttgttttatctgagttccttcctcaggaaactaccttgaagcctctcacaaaaagcatcaaagaactgaacccagatcaccacaccagatgcgggacccctcattcaccaggatcgcttccttgcccctctcgagttcctgatttcttacacattgtcacatttcttggctgctatataaagccctggttttagtcagtcagggatatggatttgagactg---cggcatctcctcagttgcagcacccaattaaagccttctcccttggcaatactcattgtctcagtgattggctttctgtgcagcgagc-gcaggaccaagactgaacccttggtgtgttggtaaca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186407880 1938 + 189454096 tgatcagtaatgttgaacttttttttcatatgcctgtagctgcatgtatttcttcttttgaaaagtgtctgttcatgtcctttgtccactttttaatgcgattgtttgtttttattcttgtaaatttatttaggttcctt----atagattctggatacaagacctttgtcagatgcatagtttgcaaatattttc------------------------------------------------------------------------tcccatttgtcagttttttgttttgttgcaattgcttttggagacttcAGtaacagatgctgccaagatcgtggagaaaagggaacacttatgcattgttaaggggagtgtgaattagttcaaccatggtggaaagcagtgtgataatttctcaaagagct-aaaatagaactgccattcaacccagcaatctcattactgggtatgcacccaaacgaatatatattgttctgtcataaagacacatgcatgcatatgtccattgcagcactattcacaataccaaagacgtggaatcgatgtaaatgcccatctatggtagagtggatgaagaaaatgtggtacatataccccacggaatactatgcagtcatagaaaagaacaagatcatgtcctttgcagaaacatggatggagctggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtgagaacacatgtacaccaagaggggaacaacacacactgggacttacctgagggtcagaattgggaggagg-gaaaggatcagaaaaa-acaactg-tgggtagtgggcttagtacctgggtgatgaaataatctgtgcaacaaa-cccccatgatatgagtttacctatgtaacaaacctgaacatatacccctgagcctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACAT---ttattattattattattactat-ttttaaaggacttgctgggaatgtattgcaattgcattgttactgtcgttcacctatttaccttaacaatattgaggttttccaactggtgaatatggtatatcttcccatttatccaggttttctttaatttctctcagcaagatttgtagttttcagtgtacaggtattgtacctattttgttaaatttaaccatatgtaatttatactttgtatgctatttcctattttcattcatagcatataaaaatataatagatttttaaatattgaccacatatcctgtggccttgctaaattcatgtattagtttgt-tttt---tgaaataaatcctattcttttaatttttaaa-taatttcttataaattctattttttctgcatagaagatctgtcctgtgtaaataaaaacattatttcatcctttcc-----aaAAAAAAAATCAGTGATGTGA---TGTCCATGTTGCTCTGAGGGCATCACTAGGATGGAGAGCACGTCCTCCCAATTTTCAGCGTGGAGATATGTCCCATGTAACCTATTCATTGtgaaggcaacccaaaagtcctatagaca-gtgcttttggacaaacataggaatggaaccttctgctgtt-gaagtttgaaactggtatttgttttatctgagttccttcctcaggaaactaccttcaagcctctcacaaaaagcatcaaagaactgaacccagatcaccacaccagatgcgggacccctcattcaccaggatcgcttccttgcccctctcgagttcctgatttcttacacattgtcacatttcttggctgctatataaagccctggttttagtcagtcagggatatggatttgagactg---cggcatctcctcagttgcagcacccaattaaagccttctcccttggcaatactcattgtctcagtgattggctttctgtgcagcgagc-gcaggaccaagactgaacccttggtgtgttggtaaca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176023228 1933 + 178775436 tgatcagtaatgttgagctttttcttcATATGCCTGTAGCtgcatgtatttcttcttttgaaaagtgtctgttcatgtcctttgtccactttttaatgcgattgtttgtttttattcttgtaaatttatttaggttcctt----atagattctggatacaagacctttgtcagatgcatagtttgcaaatattttc------------------------------------------------------------------------tcccatttgtcagttttttgttttgtggcaattgcttttggagacttcAGTAACAGATGCTGCCAAGAtcgtggagaaaagggaacacttatgcATTGTTAaggggagtgtgaattagttcaaccatggtggaaagcagtgtgataatttctcaaagagct-aaaatagaactgccattcaacccagcaatctcattactgggtatgcACCCAAACGAATATAtattgttctgtcataaagacacatgcatgcatgtgtccattgcagcgctattcacaataccaaagacgtGGAATCGCTGTAAATGCCCATCTATGGTagagtggatgaagaaaatgtggtacatgtaccccacggaatactatgcagtcatagaaaagaacaagatcatgtcctttgcagaaacatggatggagctggaggccactatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtgagaacacatgtacaccaagaggggaacaacacacactgggacttACCTGAGGGTCAGAattgggaggagg-gaaaggatcagaaaaa-acAACTG-TGAGTAGtgggcttagtacctgggtgatgaaataatctgtacaacaaaccccccatgatatgagtttacctatgtaacaaacctgaacatatacccctgagcctaaaataaaagttataaataaat-----aaataaaattcaagtgtatgaaacat---ttattattattattattactat-ttttaaagaacttgcTGGGAGTGTATTGCAATTGCATTGTTACTGTCGTTCACCTATTTACCTTAACAATATTGAGGTTTTCCAACTGGTGAATATGGTATATCTTCCCATTTATccaggttttctttaatttctctcagcaagatttgtagttttcagtgtacaggtatTGTacctattttgttaaatttaaccATATGTAATTTATACTTTGTATGCTATTTCCTATTTTCATTcatagcatataaaaatataatagatttttaaatattgaccaCATATCCTGTGGCCTTGCCAAAttcatgtattagtttgt-tttt---tgaaataaatcctattcttttaatttttaaa-taatttcttataaattctattttttctgcATAGAAGATCTGTCCTctgtaaataaaaacattatttcatcctttcc----aaaaaaaaaaatcagtgatgtgA---TGTCCATGTTGCTCTGAGGGCATCACTAGGATGGAGAGCACATCCTCCCAATTTTCAGCATGGAGATACGTCCCATGTAACCTATTCATTGTGAAGGCAACCCAAAAGTCCTATAGACA-GTGCTTTTGGACAAACAGAGGAAT-GAACCTTCTGCTGTT-GAAGTTTGAAACtggtatttgttttatctgagttccttcctcaggaaactaCCTTCAAGCCTCTCACAAAAAGCATCAAAGAACTGAACCCAGATCACCACACCAGATGCGGGA-CCCTCATTCACCAGGATCGCTTCCTTGCCCCTCTTGAGTTCCTGatttcttacacattgttacatttcctGGCTGCTATATAAAGCCCTGgttttagtcagtcagggagatggatttgagactg---cgGCATCTCCTCAGttgcagcacccaattaaagccttctcccttggcaatactcattgtctcagtgattggctttctgtgcagcgaGC-GCAGGACCAAGACTGAACCCTTGGTGTGTTGGTAACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132865777 1942 + 135778131 tgatcagtaatgttgaacttttttttcatatgcctgtagctgcatgtatttcttcttttgaaaagtgtctgttcatgtcctttgtccactttttaatgcgattgtttgtttttattcttgtaaatttatttaggttcctt----atagattctggatacaagacctttgtcagatgcatagtttgcaaatattttc------------------------------------------------------------------------tcccatttgtcagttttttgttttgttgcaattgcttttggagacttcAGtaacagatgctgccaagattgtggaggaaagggaacacttatgcattgttaaggggagtgtgaattagttccaccatggtggaaagcagtgtgataatttctcaaagagct-aaaatagaactgccattcaacccagcaatctcattactgggtatgcacccaaacgaatatatattgttctgtcataaagacacatgcatgcatatgtccattgcagcactattcacaataccaaagacgtggaatcgatgtaaatgcccatttatggtagaacggatgaagaaaatgtggtacatataccccacggaatactatgcagtcatagaaaagaacaagatcatgtcctttgcagaaacatggatggaactggaggccattatccttagcaaactaatgcaggaacagaaaaccaaatactgcatgttctcacttataaatgggagctaaatagtgagaacacatgtacaccaagaggggaacaacacacactgggacttacctgagggtcagaattgggaggagg-gaaaggatcagaaaaa-acaactg-tgggtagtgggcttagtacctgggtgatgaaataatctgtacaacaga-cccccatgatatgagtttacctatgtaacaaacctgaacatatacccctaagcctaaaataaaagttataaataaaTAAATAAAATAAAATTCAAGTGTATGAAACATttattattattattattattactat-ttttaaaggacttgctgggaatgtattgcaattgcattgttactgtcgttcacctatttaccttaacaatattgaggttttccaactggtgaacgtggtatatcttcccatttatccaggttttctttaatttctctcagcaagatttgtagttttcagtgtacaggtattgtacctattttgttaaatttaaccatatgtaatttatactttgtatgctatttcctattttcattcatagcatataaaaatataatagatttttaaatattgaccacatatcctgtggccttgctaaattcatgtattagtttgt-tttt---tgaaataaatcctattcttttaatttttaaa-taatttcttataaattctattttttctgcatagaagatctgtcctctgtaaataaaaacattatttcatcctttcc----aaAAAAAAAATTCAGTGATGTGA---TGTCCATGTTGCTCTGAGGGCATCACTAGGATGGGGAGCACGTCCTCCCAATTTTCAGCGTGGAGATATGTCCCATGTAACCTATTCATTGTGAAGGCAACCCAAAAGTCCTATAGACA-GTGCTtttggacaaacataggaatggaaccttctgctgtt-gaagtttgaaactggtatttgttttatctgagttccttcctcaggaaactaccttcaagcctctcacaaaaagcatcaaagaactgaacccagatcaccacaccagatgctggacccctcattcaccaggattgcttccttgcccctctcgagttcctgatttcttacacattgttacatttcttggctgctatataaagccctggttttagtcagtcagggagatggatttgagactg---cggcgtctcctcagttgcagcacccaatcaaagccttctcccttggcaatactcattgtctcagtgattggctttctgtgcagcgagc-gcaggaccaagactgaacccttggtgtgttggtaaca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188250326 2019 - 190850796 tgatcagtgatattgagatttta-ttcacatacctgtagctgcatacatttcttcttttgaaaagtgtctattcatgttttttgcccactttttaaatgggattttttttttga---ttgtaaatttatttaagttctttatagatagattctggatacaagacctttgtcagatgcatagtttgcaaatatttcctcccattcagtatatctgtttactctatcgatagtttcttttgctgtgcagaagctctttaatttaattagatcccatttgtgaatttttgcttttgttgcaa-tgctttc-gAGACTTCaatagcagatgctggcaaggttgtggagaaaagggaacacgtatgcattgtttgtgggagtataaattagttcaaccatggtggaaagcagtgtgacaatttttcaaagagctaaaaatagaactaccattcaacccaaccctcccattactgggtatgaacccaagtgaatatatattattctgtcataaagacacatgcatgcatatgtccattgcagcaccattcacaataacaaagacatggaatcaatgtaaatgcccatctatggtagattgaatgaagaaaatgtggtacatataacccatggagtactatgcagtcataaaaaagaacaagatcatgtcctttgcaggaacatggatggagctggaggccattatccttagcaaaccaaggcaggaacacaaaaccaaatactgcatgttctcacttataaatgggaaccaaatagtgagaagacatatacataaagaagggaacagcacacactgggacttacctatgggtcaggattgggaagaggagagagggtcagaaaaaaacaactattgggtactagacttagtacctgggtgataacattatttgtacaacaaa-ccctgatgatatgagtttacctatgtaacaaacatgcacatatacttctgaacctaaaataaaagttACAAATAACT-----AAAATAAATTCAAGTGTATAAAACAA------TTATTATTATTACTACTATTTTTTaaacagtttgctgggaatgtattgcaattgcattgtaactgtggttcacctagttaccttaacaatattgaggttttctgattggggaacatggtgtatctttccatttatttaggttttctctaatttctctcagcaagatttgtagttttcagtgtacaggtattggacatatttttaaaaatttatccatatgtaacttatactttgtatgatatttctaattttcattcatagcatataaaaatacaatatatttttaaatattgaccatatatcctgtggccttgctaaattcatgtattagttttTCTTTT---TCTTATAAATCCTATTGTTTTAATTTTCTTA-TAATTTCTTATGAATTCTGTTCTTCCTACATAGAAGACCTGTCCTCTATAAATAAAGACATTGTCTCATGTTTTCCAAAGAAAAAAAAAATTTAGTGATGTAATGGTGTTCATGTTGTTCTGAGGGCATCAGTAGGATACAGAGCATGTCCTTCTGATATTCAATGTGGAGATGTGTCCTGTGTAACGTATTCATTGTGAAATCAATGCAAAAGTCCCACAGACAGTTGCTtttggataaacatagaaatggattcttctgctgttaaaagtttgaaacttatatttgctttatctgagttccttcctcaggaaactacctttaggcctctcacgaaaagcatcaaaaaactaaaaccagatcactgcaccagatgctggg-ccttcattgaccatgatcacttccttgcccctgcggagttcttgttctcttatgcattgtcacatttcttgcctgctacataaacccctggttttagtcagtcagggagatggatttgagactgagctggcaactctgcagctgcagcgccctgttaaagccttcttccttggcaacactcatcatctcagtgattggctttctgcgcatcgagcagcaggaccgagattgaactcctggtgttttgataaca i calJac3.chr3 C 0 C 0 e canFam3.chr16 15733418 235 - 59632846 I e mm10.chr8 84732492 104 - 129401213 I a score=89972.000000 s hg38.chr4_KI270785v1_alt 65492 27 + 119912 ATTGTTC-AACAATCATTTGTTGTGACC s panTro4.chr4 190332883 27 + 193495092 ATTGTTC-AACAATCATTTGTTGTGACC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195306585 27 + 198332218 ATTGTTC-AACAGTCATTTGTTGTGACC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111269749 27 + 115148730 ATTGTTC-AACAATCATTTGTTTTGACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181071587 27 + 184069350 ATTGTTC-AAGAATCATTTGTTGTGACC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186409818 27 + 189454096 ATTGTTC-AAGAATCATTTGTTGTGACC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176025161 27 + 178775436 ATTGTTC-AAGAATCATTTGTTGTGACC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132867719 27 + 135778131 ATTGTTC-AACAATCATTTGTTGTGACC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188252345 28 - 190850796 ATTGTTCAAACAATCATTTGTTGTGACC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15733653 25 - 59632846 ATTGTTC-AATGATCAGTTTTTATGA-- i canFam3.chr16 I 235 C 0 e mm10.chr8 84732492 104 - 129401213 I a score=1303503.000000 s hg38.chr4_KI270785v1_alt 65519 363 + 119912 CTCATCTTTCCTTCTCTTTTAATTTT-CTTGAGCTCATATTTTAATTTTTATTTATT-ACATGATATTCCAATTTAATTATATTGAATTAAT-------------AAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTTGGAACTGC-AC-TGAATGGTTTTGAGCTTGGACCATATATCA--TTCATTCA-TTTTTGGGAGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCGTATATTGATGATAGGATGAAAGGATCTCAATAAAGCAGAACTTGTTTGA s panTro4.chr4 190332910 363 + 193495092 CTCATCTTTCCTTCTCTTTTAATTTT-CTTGAGCTCATACTTTAATTTTTATTTATT-ACATGATATTCCAATTTAATTATATTGAATTAAT-------------AAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTTGGAACTGC-AC-TGAATGGTTTTGAGCTTGGACCATATATCA--TTCATTCA-TTTTTGGGAGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCGTATATTGATGATAGGATGAAAGGATCTCAATGAAGCAGAACTTGTTTGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195306612 364 + 198332218 CTCGTCTTTCGTTCTCTTTTAATATT-CTTGAGCTCATATTTTAATTTTTATTCATT-AC---ATATTCCAATTTAATTATATTGAATTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATGTTATCTCATGGTATTTATATCGTTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCATTGGAACTGC-AG-TGAATGGTTTTGAGCTTGGACCATGTATCA--TTCATTTA-TTTTTGGGAGTTCACTTTAGTGTGCCTCATGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCATATATTGATGATAGAATGAAAGGATCTCAATAAAGCAGAACTTGTTTGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111269776 364 + 115148730 CTCATCTTTCCTTCTCTTTTAATTTT-CTTGATCTCATATTTTAATTTTGATTCATT-ACATGATATTCTAATTTAATTATATTGAGTTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTTGGAACTG--AG-TGAATGGTTTTGAGCTTGGACCATATAGCA--TTCATTTATTTTTTGGGAGTTCACTTTAGTGGGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCATATAT---TGATAGGATGAAAGGATCTCCATAAAGCAGAACTTGTTTGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181071614 366 + 184069350 CTTATCTTTCCTTCTCTTTTAATTTT-CTTGAGCTCATATTTTATTTTTCATTCATT-ATATGGTATTCTAATTTAATTATATTGAATTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTCGGAACTGC-AG-TGAATAG-TTTGAGCTTGGATCATATATCA--GTCATTTA-TTTTTGGGAGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCATATATTGATGATAGGATGAAAGGATCTCAATAAAGCAGAACTCGTTTGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186409845 366 + 189454096 CTTATCTTTCCTTCTCTTTTAATTTT-CTTGAGCTCAtattttatttttcattcatt-atatggtattctaatttaattatattGAATTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTCGGAACTGC-AG-TGAATAG-TTTGAGCTTGGATCATATATCA--TTCATTTA-TTTTTGGGAGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGATCTTTAAAGGAAGCCCTTTGGATCATATATTGATGATAGGATGAAAGGATCTCAATAAAGCAGAACTCGTTTGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176025188 366 + 178775436 Cttatctttccttctcttttaatttt-cttgagctcatattttatttttcattcatt-atatggtattctaatttaattatattGAATTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTAGGACTCACAGCTTTGGAACTGC-AG-TGAATAG-TTTGAGCTTGGATCatatatca--ttcattta-tttttgggaGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATGCAACTTTAATTCATGGTCTTTAAAGGAAGCCCTTTGGATCATATATTGATGATAGGATGAAAGGATCTCAATAAAGCAGAACTCGTTTGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132867746 366 + 135778131 CTTATCTTTCCTTCTCTTTTAATTTT-CTTGAGCTCATATTTTATTTTTCATTCATT-ATATGGTGTTCTAATTTAATTATATTGAATTAAT------AAG---CAAGTTATTCTGTTGATGCCCTCCAGAATATTATCTCATGGTATTTATATCATTTCACTTAATGTCTCTTCATGAATTGGGACTCACAGCTTTGGAACTGC-AG-TGAATAG-TTTGAGCTTGGATCATGTATCA--TTCATTTC-TTTTTGGGAGTTCACTTTAGTGTGCCTCAGGGTGGGAATAATACAACTTTAATTCATGATCTTTAAAGGAAGCCCCTTGGATCATATATTGATGATAGGATGAAAGGATCTCAATAAAGCAGAACTCGTTTGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188252373 364 - 190850796 CTCATCTTTCCATCTTTTTTAATCTT-CTTGAACTCAAATTTCAATTTTGATTCATTGGCATGGTAT-----ATTAATTATATTGAATTAAT------AAG---CAAGTTATTCTATTAATGCTCTCCAGCTTATTATCTCACAGTATTTATATCATTTCACTTAATGTGTCTGCATGAATTAGGACTCACTCCTTTGAAACTGC-AGTTGAATGGTTTTGAGCTTAAACCATATATCA--TTTATTTA-TTTTTGGGAGTTTGCTGTAGTGTGCCTCAGGCTGGGAATACTGCACCTTTAATTCATGATCTTTAAAAGAAGCCCTTTAGATCATATATTGATGATCGGATAAAAGGATCTCAATAAAGCAGAAATTGTTTGA i calJac3.chr3 C 0 C 0 s mm10.chr8 84732596 361 - 129401213 CTTCTCTTCCCTGGTCTTTAGATTTTCCTCGAGCCAGTGTTTCAATTTTGATTCATT-AAATAGTATTCTAATGTAATCATGTTGTATAATTTAGGTCAAA---CTGGTTATTCATTTGCTGTGTTCCTGAATCTTATTTCTTGACACCTATTTCACTCTGCTTCTCATCCCTGGATGGATTGGGATGCCATGCTGTGGAAGGAC-AG-TGGACATACTT--GCCTGGAGCATGTCTTGTTTTCTGTGA-TTTTCAAGTTTTCACATTGGTAGACCTCTGGATGGGAATAATTCATCTATAATTTACCATCTCTAAAAGCAGCTCTAGGGGT-------------TGAGATAAAATGATCTCAATAAAGTGGAAATTGATTGG i mm10.chr8 I 104 C 0 s canFam3.chr16 15733678 357 - 59632846 -TCTTCTTTCCTTCCTTTGTAATTTT-CTTGGGACGATATCttaattttactttatt-aaatggtattttaatttaattatattgtat-aat------aaGGGTCAAGTTATTCTGTTAATGTCCTCCAGAATATTGTCATATGATATTTATATCACTCCACTTAATGTCTCTGATAGAATCAGTCCTCTCAGCTTTGGAGCAGCAAG-TGAACAGTTTTGTACTAGAACCATAGATTA--TTCAGTTA-TGTTTGGGATCTTACTTTAGGGAGCCTTGGGCCAGGGACA-TGCATCCTTAATCCACTGT-TTTAAGGCAAGTTCCTT----------TTGATGATAGCATGAAATGCTCTTAATAAAGCAAAAAGTTATTGG i canFam3.chr16 C 0 I 419 a score=985848.000000 s hg38.chr4_KI270785v1_alt 65882 259 + 119912 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGATA-------TTGTATC------------GGTTGA----TGTTAAAATGATCTCGTGTGTTAGATTTTGATAGCATGGAGGAACAGAGATGGGCAATCATATCCTTCTGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCACTGATGTACTAAGGGAAATAGTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CAGGAAATATAATAAAAACCATTAATAT s panTro4.chr4 190333273 259 + 193495092 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGATA-------TTGTATG------------GGTTGA----TGTTAAAATGATCTCATGTATTAGATTTTGATAGCATGGAGGAACAGAGATGGGCAATCATGTCCTTCTGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCATTGATGTACTAAGGGAAATAGTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CAGGAAATATAATAAAAACCATTAGTAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195306976 259 + 198332218 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGATA-------TTGTATG------------GGTTGA----TGTTAAAATGATCTCATTTATTAGATTTTGATAGCATGGAGGAACAGAGATGGGCAATCATATCCTTCTGTATTTCCTTCTTGTGACAAGATATGACCATGGAGGCATTGATCTACGAAGGCAAATAGTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CAGGAAATATAGTAAAAACCATTAATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111270140 263 + 115148730 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGATA-------TTGTATG------------GGTTGATGATTGTTAAAATGATCTCATTTATTAGATTTTGATAGCATGGAGGAACAGAGATGGGCAATCATATCCTTCTGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCATTGATCTACTAAGGGAAATACTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CAGGAAATATAATAAAAACCATTAATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181071980 262 + 184069350 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGCTA-------TTGTATG------------GGCTGATAATTGTTAAAATGATCTCATTTCTTGGATTTTGATAGCAT-GAGGAACAGAGACGGGCAATCATATCCTTCAGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCGTTGATCTACTAAAGGAAATACTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CCGGAAATATAATAAAAACCATTAATAT i rheMac3.chr5 C 0 I 21 s macFas5.chr5 186410211 262 + 189454096 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGCTA-------TTGTATG------------GGCTGATAATTGTTAAAATGATCTCATTTCTTGGATTTTGATAGCAT-GAGGAACAGAGACGGGCAATCATATCCTTCAGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCGTTGATCTACTAAAGGAAATACTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CCGGAAATATAATAAAAACCATTAATAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176025554 262 + 178775436 GATTCGGTcacatttcatttcaaaattattaggTTGAAGTTGCTGAT----------------------TTAGTGGGCTA-------TTGTATG------------GGCTGATAATTGTtaaaatgatctcatttcttGGATTTTGATAGCAT-GAGGAACAGAGACGGGCAATCATATCCTTCAGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCGTTGATCTACTAAAGGAAATACTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CcggaaatataataaaaaccattGATAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132868112 262 + 135778131 GATTAGGTCACATTTCATTTCAAAATTATTAGGTTGAAGTTGCTGAT----------------------TTAGTGGGCTA-------TTGTATG------------GGCTGATAATTGTTAAAATGATCTCATTTCTTGGATTTTGATAGCAT-GAGGAACAGAGACGGGCAATCATATCCTTCAGTATTTCCTTCTTGTGACAAGATATGACCATGGAAGCATTGATCTACTAAAGGAAATACTGTTTCATCAACTGCACTGAGCTATCCAGAGT---CCGGAAATATAATAAAAACCATTAATAT i chlSab2.chr7 C 0 I 21 s calJac3.chr3 188252737 262 - 190850796 GATTAGGTCACATTTCATCTCAAAATTATTAGATTGAAGTTTC-GAT----------------------TTAGTGAGATA-------TTGTGTG------------GGTTGATGATTGTTAAAATGATCTCATTTATTAGATTTTGATAGCATGGAGGAACAGAGATGCATAATCATATCCTTCTGTATTTCCTTCTTGTGACAAGACATGACCATGGAAACACTGATCTACTCAGAGAAATACTGTTTCATCAACTGCACTAAGCTATCCAGAGT---CAGGAAATATAATAAAAACCATCAATAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84732957 287 - 129401213 CATTTCATCACATTTCAGTTTAAAATTATTAAGTCGAAATAGCTGACCTCCTGGGTCAAACCCAATTGATTGCTGGAGTG-------TCATGTT------------ATTTAGTAATTGCTAAGATCATCACATTTATTAGACACTGATAACAT-GAAGAAGAAAGGTGGTCATCAGCTTCTTCCTGCACTTCCTTTTTGTGACAAGAGAGAACTATGGAGGTATTTATCTACAAGAAGAAACACTATTTTATCAGACTTCCCAAATTATATTGGATAAAAAAAAAATGTAACAAAAGTGATTAAGAG i mm10.chr8 C 0 C 0 s canFam3.chr16 15734454 281 - 59632846 GATTAGGTCACATTTCATTTAGAAATTATTAAATTGAAATTGATGAT----------------------TTGGTAAGTCAAAACCAGTTGAATGTTGAAATATCATGGTTTAT-ATTTTTGACATGATTTCACTAATTGGATTTTGATAGCATAGAGGAACAGAGAGGAGTAATCATTCTTTTCTGTGTTTTCTGCTTGTGACAAGATATAACTGCAGAAATATTGATCTACTAGGGGAAATACTATTTTATCAACTTTACAAAGCTATGCAGAGT---CAAGTAATATGATATAAATTATTAATAT i canFam3.chr16 I 419 C 0 a score=2674.000000 s hg38.chr4_KI270785v1_alt 66141 5 + 119912 TCCTT- s panTro4.chr4 190333532 5 + 193495092 TCCTT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195307235 5 + 198332218 TCCTT- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111270403 5 + 115148730 TCCTT- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186410473 3 + 189454096 --ATT- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176025816 3 + 178775436 --ATT- i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188252999 5 - 190850796 TCCTT- i calJac3.chr3 C 0 C 0 s mm10.chr8 84733244 5 - 129401213 TTCTC- i mm10.chr8 C 0 C 0 s canFam3.chr16 15734735 5 - 59632846 -CCCTG i canFam3.chr16 C 0 C 0 e chlSab2.chr7 132868374 21 + 135778131 I e rheMac3.chr5 181072242 21 + 184069350 I a score=2259090.000000 s hg38.chr4_KI270785v1_alt 66146 664 + 119912 GCTAA-----------------AGGGATTTCTATTTATTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTGCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCATTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATATTCTAGAGACTATTGTGATCAAGCATCTACAAACTTGTGATAG---ATTTTGTTGAATCAATTTCAGTGTGAGATCTTTAGAGAAGAG-TAGAAGAACTATTCTGTTAGGATAAAGATTTAATTTGATAGAGAGATCACAAAGAGCCACAATGTCAAAAGATTC----AAGAT----AGTTTGCACCTAACTTAAAATTGGAACAGTAGTGTAAAATATAAAAACA---------CTGTGCTTAATATGTTTCATATG---------------------------------------CTTTCTATGTTAAATATATATATTTAATATGCTGAATATATAGGAGGTTCTATAA-ATAGTTTTCATTCTCAAATGAAATCTTACATTGTAAGATAGAAAAAAAGACGTAGGCCTCATTTGCATTTGAAAATAGAAATGAAGAAATGAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGCAATGGATAATTACTTTAAGAAAAACGAATTTT-CATTTGAATTGGTG-AAAAATTGATA----------ACTTTT s panTro4.chr4 190333537 664 + 193495092 GCTAA-----------------AGGGATTTCTATTTCTTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTGCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCATTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATATTCTAGAGGCTGTTGTGATCAAGCATCTACAAACTTGTGATAG---ATTTTGTTGAATCAATTTCAGTGTGAGATCTTTAGAGAAGAG-TAGAAGAACTATTCTGTTAGGATAAAGATTTAATTTGATAGAGAGATCACAAAGAGCCACAATGTCAAAAGATTC----AAGAT----AGTTTGCACCTAACTTAAAATTGGAACAGTAGTGTAAAATATAAAAACA---------CTGTGCTTAATATGTTTCATATG---------------------------------------CTTTCTATGttaaatatatatatttaatatGCTGAATATATAGGAGGTTCTATAA-ATAGTTTTCATTCTCAAATGAAATCTTATATTGTAAGATAGAAAAAAAGACGTAGGCCTCATTTGCATTTGAAAATAGAAACAAAGAAATGAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGATAATTACTTTAAGAAAAACGAATTTT-CATTTGAATTGGTG-AAAAATTGATA----------ACTTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195307240 664 + 198332218 GCTAA-----------------AGGGATTTCTATTTCTTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGCGGTTATTTTCTTCAAACTATATTTGCAGGGAGTCAGTAATATAGATTTTGCCTTCT--TGGGAAAATG--AGTCATTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATATTCTAGAGGCTATTGTGATCAAGCATCTACAAACTTGTGATAG---ATTTTGTTGAATCAGTTTCAGTGTGAGAGCTTTAGAGAAGAG-TAGAAGAACTATTCTGTTAGGATAAAGATTTAATTCCATAGAGAGATCACAAAGATCCACAATGTCAAAAGATTC----AAGAT----AGTTTGCACCTAACTTAAAATTGGAACAATAGTGTAAAATATAAAAACA---------CTGTGCTTAATATGTTTCATATG---------------------------------------CTTTCTATGTTAAATATATATATTTAACATGCTGAATATATAGGAGGTTCTATAA-ATAGTTTTCATTCTCAAATGAAATCTTATATTGTAAGATAGAAAAAAAGACGTAGGCCTCATTTGCATTTGAAAATAGAAATGAAGAAACGAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGATAATTACTTTAAGAAAAATGAATTTT-CATTTGAATTGGTG-AAAAATTGACA----------ACTTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111270408 656 + 115148730 GCTAA-----------------AGGGATTTCTATTTATTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGGGGTTCTTTTCTTCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCATTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATACTCTAGAGGCTATTGTGATCAAGCATCTACAAACTTGTGACAG---ATTTTGTTGAATCAATTTCAGTGTGAGATCTTTAGAGAAGAG-TAGAAGGACTATTCTGTTAGGATAAAGATTTAATTCGATAGAGAGATCACAAAGATCCACAATGTCAAAAGATTC----AAGAT----AGTTTGCACCTAACTTAAAATTGAAATAATAGTGTAAAATATAAAAACA---------CTGTGCTTAATATGTTTCATATG---------------------------------------CTTTCTATGTTAAATATATATATTTAATATGCTAAATATGTA-GAGGTTCTATAA-ATAGTTTTCATTCTCAAA-------TTATATTGTAAGATAGAAAAAGAGATGCAGGCCTCATTTGCATTTGAAAATAGAAATGAAGAAATGAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGATAATTACTTTAAGAAAAACGAATTTT-CATTTGAATTGGTG-AAAAATTGACA----------ACTTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181072263 646 + 184069350 GCTA------------------AAGGGTTTCTATTTCTTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTTCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCACTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATACTCTAGAGGCTATTGTGGTCAAGCATCTACAAACTTGTGATAG---ATTTTGTTGATTCAATTTCAGTGTGGGATCTTTAGAGAAGAG-TAGA---ACTATTCTGTTAGGATAACGATTTACTTCGAGAGAGAGATCACAAAGATCCACAATATCAAAAGATTC----AAGAT----CGTTTGCACCTAACTTAAAATTGGAATAATAGTGTAAAATATAAAAAAA--------CCTGTGCTTAATATGTGTCATATG---------------------------------------CTTTCTATGTTAA--ATATATATTTAATATGCTAAACATGTAGGAAGTTCT-----ATAGTTTTCATTGTCAAG-------TTATATTGTAAGATAGAAAAAAAGAC--AGGCCTCATTTGCATTTGAAAATAGAAATGCAGAAATAAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGAGAACTACTTTAAGAAAAAGGAATTTT-CATCTGAATTGATG-AAAAATTGACA----------ACTTTC i rheMac3.chr5 I 21 C 0 s macFas5.chr5 186410476 663 + 189454096 GCTAAATACATTAATTTAGCT-AAAGGTTTCTATTTCTTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTTCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCACTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATACTCTAGAGGTTATTGTGGTCAAGCATCTACAAACTTGTGATAG---ATTTTGTTGATTCAATTTCAGTGTGGGATCTTTAGAGAAGAG-TAGA---ACTATTCTGTTAGGATAACGATTTACTTTGAGAGAGAGATCACAAAGATCCACAATATCAAAAGATTC----AAGAT----CGTTTGCACCTAACTTAAAATTGGAATAATAGTGTAAAATATAAAAAAA--------CCTGTGCTTAATATGTGTCATATG---------------------------------------CTTTCTATGTTAA--ATATATATTTAATATGCTAAACATGTAGGAAGTTCT-----ATAGTTTTCATTGTCAAG-------TTATATTGTAAGATAGAAAAAAAGAC--AGGCCTCATTTGCATTTGAAAATAGAAATGCAGAAATAAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGAGAACTACTTTAAGAAAAAGGAATTTT-CATCTGAATTGATG-AAAAATTGACA----------ACTTTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176025819 665 + 178775436 GCTAAATACATTAATTTAGCTAaagggtttctatttctttaactGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTttcttcaaattatattttcaggGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCACTGCGGAAATATCTGTAGGTCTTC-TTTGGAAGAATACTCTAGAGGCTATTGCGGTCAAGCATCTATAAACTTGTGATAG---ATTTTGTTGATTCAATTTCAGTGTGGGATCTTTAGAGAAGAG-TAGA---ACTATTCTGTTAGGATAACGATTTACTTCGATAGAGAGATCACAAAGATCCACAATATCAAAAGATTC----AAGAT----CGTTTGCACCTAACTTAAAATTGGAATAAtagtgtaaaatataaaaaaa--------cctGTGCTTAATTTGTGTCATATG---------------------------------------CTttctatgttaa--atatatatttaatatgctaAACATATAGGAAgttct-----atagttttcattgtCAAG-------TTATATTGtaagatagaaaaaaagac--aggcctcatttgcatttgaaaatagaaatgcagaaataagaaaatgaataattctAGTATCAG-ACTATGTTTCTTCTGAAATGGAGAACTActttaagaaaaaggaatttt-caTCTGAATTGGTGAAAAAATTGACA----------ACTTTc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132868395 646 + 135778131 GCTA------------------AAGGGTTTCTGTTTCTTTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTTCAAATTATATTTGCAGGGAGTCAGTAAGATAGATTTTACCTTCT--TGGGAAAATG--AGTCACTGGGGAAATATCTGTAGGTCTTC-TTTGGAAGAATACTCTAGAGGCTATTGTGGTCAAGCATCTAAAAACTTGTGATAG---ATTTTGTTGATTCAATTTCAGTGTGGGATCTTTAGAGAAGAG-TAGA---ACTATTCTGTTAGGATAACGATTTACTTCGATAGAGAGATCACAAAGATCCACAATATCAAAAGATTC----AAGAT----CATTTGCACCTAACTTAAAATTGGAATAATAGTGTAAAATATAAAAAAA--------CCTGTGCTTAATATGTGTCATATG---------------------------------------CTTTCTATGTTAA--ATATATATTTAATATGCTAAACATATAGGAAGTTCT-----ATAGTTTTCATTGTCAAG-------TTATATTGTAAGATAGAAAAAAAGAC--AGGCCTCGTTTGCATTTGAAAATAGAAATGCAGAAATAAGAAAATGAATAATTCTAGTATCAG-ACTGTGTTTCTTCTGAAATGGAGAACTACTTTAAGAAAAACGAATTTT-CATCTGAATTGGTG-AAAAATTGACA----------ACTTTC i chlSab2.chr7 I 21 C 0 s calJac3.chr3 188253004 655 - 190850796 GCTAA-----------------AGGAATTTCTATTTCTGTAACTGCTAACTCAGTTATTTTAGTAACATAATGGTTAAATCAGTAGAGGTTCTTTTCTTCAAATTATGTTTGCAGGGAATCGGCAAGATAGATTTTACCTTCT--TGGGAAAATG--AGT---TGGGGAAATATCTGTAGGTCATC-TTTGGAAGAATACTCTAGAGGCTTTTGTGATCAACCATCTACAAACTTGTGATGG---ATTTTATTAAATCAATTTCAGTTTGAGATCTTTCGAGATGAA-TAGA---ACTATTCTGTTAGGAT-ATACTATAATTCCATATAGAGATCACAAAAATCTATAATATCAAAAGAAAC----AAGATAGACAGTTTGTACCTAACTTAAAATTGGAATAATAGTGTCAAATATAAAAAAAGTAA---AACTGCACTTAA--CGTTTCATATG---------------------------------------CTTTCTATGTTAA--ATATATATATAATATGCTAAATATATAGAAGGTTCCATAA-ATAGTTTTCATTCTCAAA-------TTATATTATAAGATAGAGAAAAAGACCTAAGCTTCATTTGCATTTGAAAATAGCAATGAAGAAGTGAGAAAATGAATAATTCTAGTTTCAG-ATTGTGTTTCTTCTTAAATGGCTAATTA-TTTAAGAAAAACGAATTTT-CATTTGAATATATG-AAAAATTGACA----------ACTTTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84733249 627 - 129401213 ACCAA-----------------AGAGAATTCTGTTTCTTTAACTGCTA-------------AGTAATATCATACTTAACTTAGAAGAGGTTATTTTCCTGAAACTCTAGTCGCAGGTAATTCACAAGATAGGGTTCATCGTCTCCTGGGAGAGTAATAGGCTTTCAGGAACCATGGGTTGACTTTAGTTCGGAAGAATGCTCTAGGGAGAATTGTGATCAGGTGTCTACAAATGTGAGATCG----CCCTACTCAATCAATTTCAATGTGAGAATCTTAGAGAATAG-TTGAC--AAAATGGTGTTAGAATAAAGATTTG-TTCCATAGTGAGAACACCAAAATCCACAATATTAAAAGATAC----AAATTATAGAGTTTACCCTGGAGTT----TCATATCACTGCTTTCAAGCATAAGTAAA---------ATGTG------AAACTTCACATA---------------------------------------------ATGGTAAGTATGTGTGTTTAGAAACCAGAATATATATGAAATTCTTTAA-ATAGTTTCCCTTGT-ACA-------CGATCTTATAAGGAGGAAACCAAATACTAGACTTCATTTTCATTTGCAAACAGTCATGAAGAAACAAGA-----AACATTTCTAATTTCCA-AA-GTTTTATTTCTTAAGTAGATAACTACTTGAAGAAAAATCTATGTTATATTTAAATTGATG-TAAAATAAATA----------TCTTGT i mm10.chr8 C 0 I 182 s canFam3.chr16 15734740 668 - 59632846 ATTAA-----------------AGGGATTTGTATTTCTTGAACTGCT----CAGTTATTTTAGTAACATAGTGGTTAACTCAGTAGAGTTTCTTTCCTTTAAATTATATTCATAAGGAACCAATAAGATAGATTTCACCCTCT--TAGGATAATGAGAGGGTTTTAGGAACTATCTGTAGGT-TCC-TTTAGAAGAATACTCTAGAGGCTATTGTGATCATCCATCTACAAATTTGTGATAGTCCTCCTTGTTGAATCAATTTCAG--TGAGACCTTTAGAGAATAGCTAGG---ATTGTTTAGTTAGGATAGAGATTTAATTCCACAGAGAGATCATAAAGATCCACAATATTGGAAGATTCAAGTAAGAC----AGTTTGTATCTAAC--AGAATTAGAATAATAGTATCAAGTATAAAGAAAAAAATGCAACAGAGCTTAATATGCTTTACatatatattatatatatttaatatatatGTATTATGGTTCTACTTAATATGTTAAATATATATGTTTA--ATGTTAGCCATATATGAAGTTCTATAAGTTCGTTTTCATTCTCAAA-------TTATATTGTAAGGTAGAAA-AGAGAT---------------ATTT--------------------------ATGAATAATTCTAGTATCAACACTTTGT---TTCTGAAATAGATAACTACTTTAAGAAAAACTAATCTT-TATCTAAATCAAAT-GAAAAATGACACTGTTCTCCCACTTTT i canFam3.chr16 C 0 C 0 a score=12418.000000 s hg38.chr4_KI270785v1_alt 66810 3 + 119912 CCT s panTro4.chr4 190334201 3 + 193495092 CCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195307904 3 + 198332218 CCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111271064 3 + 115148730 CCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181072909 3 + 184069350 CCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186411139 3 + 189454096 CCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176026484 3 + 178775436 cct i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132869041 3 + 135778131 CCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188253659 3 - 190850796 CCT i calJac3.chr3 C 0 C 0 s mm10.chr8 84734058 3 - 129401213 TCC i mm10.chr8 I 182 C 0 s canFam3.chr16 15735408 3 - 59632846 TCT i canFam3.chr16 C 0 I 194 a score=4188072.000000 s hg38.chr4_KI270785v1_alt 66813 1150 + 119912 CACTTTTTAAAATGTAAATAGAGTGGTTGGAAACTAAAAAAAA-AA----TC----------------------------AGTAAGATCAGCTTTCTCTGCACCTGT--GTCAGCAAAACATAAGGAATTCTGAGGGGAAAAAGTGAAACGTTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGATGTTTAATATCCAGAAGCATAACCCTGAAATCTCAAGACTTCGACTTACAATTGCCTACA-AAAATATTCTAA--------TTTACTG--ATTGTAATGTTTTCCATATACAATTAAGAAACAGTTTAGCAcattattattttaattttgcattcttcaatgtaattttacatCACATTTATTGATTATAGACTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAGTTCCCTAG---GATGCTTTGTCTGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTATTACA-CAGTTCACCCAAGATTCTGCACACGTTTT--TCCAGTGTGCAATGTAGCAAAAATA---ACTGAAATACTGTATAGTGGATGGATTTGGCATGGAAGTCATCCCAAAGATCTGCTGGAGTATAACAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAATAGAATAAAGGTAAATTCCACACAAGGCAG-TTTTTCCC--CTCCATATATAGTAAAGATTTAATGACAGTCTCTGGAAAGATTGTACTGGCAATGTTTCAAGTA-TCACATTGTCTTTTA-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TATGCTTGACTGCAAGGATGCAAAATGACTTTTCCATATTCAACTGTCTCTTCGGCACTACTCAAATTTTAACGAGTAATGGATTTTTGTGACTAAAAAGGTAGTTGTATGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTAACCATGGAAGTAATTTGACTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATAATACATACAAAGCTTTGCTTAGGAACTCCTAATTTCAACATCTCCATCCCTGCCGCATATCCCATTCCGG-ATTCTGTTTCTCAT s panTro4.chr4 190334204 1151 + 193495092 CACTTTTTAAAATGTAAATAGAGTGGTTGGAAACTAAAAAAAA-AA---ATC----------------------------AGTAAGATCAGCTTTCTCTGCACCTGT--GTCAGCTAAACATAAGGAATTCTGAGGGGAAAAAGTGAAACGTTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGATGTTTAATATCCAGAAGCATAACCCTGAAATCTCAAGACTTCTACTTACAATTGCCTACA-AAAATATTCTAA--------TTTACTG--ATTGTAATGTTTTCCATATACAATTAAGAGGCAATTTAGCACATTATTATTTTAATTTTGTATTCTTCAATGTAATTTTACATCACATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAGTTCCCCAG---GATGCTTTGTCTGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTATTACA-CAGTTCACCCAAGATTCTGCACACGTTTT--TCCAGTGTGCATTGTAGCAAAAATA---ACTGAAATACTGTATAGTGAATGGATTTGGCATGGAAGTCATCCCAAAGATCTACTGGAGTATAACAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAATAGAATAAAGGTAAATTCCACACAAGGCAG-TTTTTCCC--CTCCATATATAGTAAAGATTTAATGACAGTCTCTGGAAAGATTGTACTGGCAATGTTTCAAGTA-TCACATTGTCTTTTA-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TGTGCTTGACTGCAAGGATGCAAAATGACTTTTCCATATTCAACTGTCTCTTCGGCACTACTCAAATTTTAACCAGTAATGGATTTTAGTGACTAAAAAGGTAGTTGTATGTTGAATGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTAACCATGGAAGTAATTTGACTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATAATACATACAAAGCTTTGCTTAGGAACTCCTAATTTCAACATCTCCATCCCTGCCGCATATCCCATTCCGG-ATTCTGTTTCTCAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195307907 1151 + 198332218 CACTTTTTAAAATGTAAATAGAGTGGTTGGAAACTAAAAAAAA-AA----TC----------------------------AGTAAGATCAGCTTTCTCTGCACCTGT--GTCAGCTAAACATAAGGAATTCTGAGGAGAAAAAGTGAAACGTTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGATGTTTAATATCCAGTACCATAACCCTGAAATCTCAAGACTTCTACTTTGAATTGCCTGTA-AAAATATTCTAA--------TTTACTG--ACTGTAATGTTTTCCATATGCAATTAAGAGACAGTTTAGCATATTATTATTTTAATTTTGCATTCTTCAGTGTAATTTTACATCACATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAGTTCCCCAG---GATGCTTAGTTTGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTATTACAGCAGTTCACCCAAGATTCTGCACACGTTTT--TCCAGTGTGCAATGTAGCAAAAATT---ACTGAAATACCGTATAGTGGATGGATTTGGCATGGAAGTCATCCCAAAGATCTACTGGAGTATAACAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAAAAGAATAAAGGTAAATTCCACACAAGGCAG-TTTTTCCC--CTCCATATATAGTAAAGATTTAATGACAGTCTCTGGAAAGATTGTACTGGCAATGTTTCAAGTA-TCACATTGTCTTTTA-GGGATCAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAT-GTCTTCTAAAGATAGCTGTAATATGTTC---TATGCTTGAGTGCAAGGATGCAAAATGACTTTTCCATATTCAGCTGTCTCTTTGGCACTACTCAAATTTTAACCAGTAATGGATTTTAGTGACTAAACAGGTAGTTGTGTGTTGACTGGACGACAGTAAATGTTTCCTTTC----TAATTAGAGAATAGCAGAATGGGAAGTAATCATGGAAGTAATTTGACTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATAATACATACAAAGCTTTGCTTAGGAACTCCTAATTTCAACATCTCCATCCCTGCCACATATCCCATTGCGG-ATTCTGTTTTTCAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111271067 1146 + 115148730 CACTTTTTAAAATGTAAATAGAGTGGTTGGAAACTGAAAAAAA-A-----TC----------------------------AGTAAGATCAGCTTTCTTTGCACCTGT--GTCAGCTAAGCATAAGGAATTCTGAGGAGAAAAAGTGAAACATTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGATGTTTAATATCCAGAAGCATAACCCTGAAATCTCAAGACTTCTACTTACAATTGCTTATA-AAAATATTCTAA--------TTTACTG--ATTGTAATGTTTTCCATATACAATTAAGAGACAGTTTAGCACAGTATTATTTTAATTTTGCATTTTTCAATGTAATTTTACATCACATTTATTGATTATAGATTTGTGTGTCTTTCCCATTATTTGGCTTCACAGTAGTTCCCCAG---GATGCTTTGTCTGTAAAGCCACTTTAAAATGTCATCCACATCATAAATGTTACAAATCCTATTAGAGCAGTTCACCCAAGATTCTGCACACGGTTT--TCCAGTGTGCAATGTAGCAAAAATA---ACTGAAATACTGTATAGTGGATGGATTTGGCATGGAAGTCATCCCAAAGATCTACTGGAGTATAACAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGCATTTCAACAGAATAAAGGTAAATTCCACACAAGGCAG-TTTTTCCC--CTCCATATATAGTAAAGATTTAATGACAGTCTCTGGAAAGATTGTACTGGCAATGTTTCAAGTA-TCACATTGTCTTTTA-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TGTGCTTGTCTGCAAGGATGCAAAATGACTTTTCCATATTGAACTGTCTCTTCGGCACTACTCAAATTTTAACCAGTAATGGATTTTAGTGACTAAAAAGGTAGTTGTATGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTGGCCATGGCAGTAATTTGAC----TGATTGG-TGTTTGCTTTATCAA-GTGTGCGAGATAATACATACAAAGCTTTGCTTAGGAACTCCTAATTTCAACATCTCCATCCCTGCCGCATATCCCATTCCAG-ATTCTGTTTCTCAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181072912 1153 + 184069350 TACTTTTTAAAATGTAAATAGAGTGGCTGGAAACTAAAAAAGT-AA----TCAG------------------------AAAGTAAGATCGGCTTTCTCTGCACCTGT--GTCAGCTAACCAT-AGGAATTCTGAGGAGAAAAAGTGAAACATTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGGTGTTTAACATCCAGAAGCATAACCCTGACATCTCAAGACTTCTGCTTACAATTGCCTGTA-AAAGTATTCTAA--------TTTACTG--ATGGGAATGTTTTCCATATACAATTAAGAAACAATTTAGCATGTTATTATTTTAATTTTGCATTCTTCAGTGTAATTTTACATCAGATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAATTCCCCAG---GATACTTTGTCCGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTGTTACAGCAGTTCACCCGAGATTCTGCACACGTTTT--CCCAGTGTGCAGTGAAGTGAAGATA---ACTGACATGCTGTATAGTGGATGGATTTGGCCTGGAAGTCATCCCAAAGATCTACTGGAGTATAATAGGGG-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAACGGAATAAAGGGAAATTCCACACAAGGCAG--TTTTCCC--CTCCGTATATAGTAAAGATTTAATGACAGTCTTTGGAAGGATTGTACTGGCAATGTTTGAAGTA-TCACATTGTCTTTTG-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TATGCTTGACTGAAAGGATGCCAAATGACTTTTCCATATTCAACTGCCTCTTCGGCACTTCTCGAATTTTAACCTGTAATGGATTTTAGTGACTAAAAAGGTAGTTGTATGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTGACCATGGAAATAATCTGATTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATGTTACATACAAAGCTTTGCTTAGTAACTCCTAATTTCAACATCTCCATCCCGGCTGCATATCCCATTCCGG-TTTCTGTTTCTCAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186411142 1152 + 189454096 TACTTTTTAAAATGTAAATAGAGTGGCTGGAAACTAAAAAAGT-AA----TCAG------------------------AAAGTAAGATCGGCTTTCTCTGCACCTGT--GTCAGCTAACCAT-AGGAATTCTGAGGAGAAAAAGTGAAACATTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGGTGTTTAACATCCAGAAGCATAACCCTGACATCTCAAGACTTCTGCTTACAATTGCCTGTA-AAAGTATTCTAA--------TTTACTG--ATGGGAATGTTTTCCATATACAATTAAGAAACAATTTAGCATGTTATTATTTTAATTTTGCATTCTTCAGTGTAATTTTACATCAGATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAATTCCCCAG---GATACTTTGTCCGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTGTTACAGCAGTTCACCCGAGATTCTGCACACGTTTT---CCAGTGTGCAGTGAAGTGAAGATA---ACTGACATGCTGTATAGTGGATGGGTTTGGCCTGGAAGTCATCCCAAAGATCTACTGGAGTATAATAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAACGGAATAAAGGGAAATTCCACACAAGGCAG--TTTTCCC--CTCCGTATATAGTAAAGATTTAATGACAGTCTTTGGAAGGATTGTACTGGCAATGTTTGAAGTA-TCACATTGTCTTTTG-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TATGCTTGACTGAAAGGATGCCAAATGACTTTTCCATATTCAACTGCCTCTTCGGCACTTCTCGAATTTTAACCTGTAATGGATTTTAGTGACTAAAAAGGTAGTTGTATGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTGACCATGGAAATAATCTGATTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATGTTACATACAAAGCTTTGCTTAGTAACTCCTAATTTCAACATCTCCATCCCGGCTGCATATCCCATTCCGG-TTTCTGTTTCTCAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176026487 1153 + 178775436 tac-ttttaaaatgtaaatagagtGGCTGGAAACTAAAAAAGTAAA----TCAG------------------------AAAGTAAGATCGGCTTTCTCTGCACCTGT--GTCAGCTAACCAT-AGGAATTCTGAGGAGAAAAAGTGAAACATTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTAAGTTCTTTAAGAAGTTGCTGTTTAGATTGCAAGAGGGTGTTTAACATCCAGAAGCATCACCCTGAAATCTCAAGACTtctg-ttacaattgcctata-aaAGTATTCCAA--------TTTACTG--ATTGGAATGTTTTCCATATACAATTAAGAAACAATTTagcatgttattattttaattctgcaTTCTTCAATGTAATTTTACATCAGATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAATTCCCCAG---GATACTTTGTCCGTAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAACCCTGTTACAGCAGTTCACCCGAGATTCTGCACACGTTTT--TCCAGTGTGCAGTGAAGTGAAGATA---ACTGACATGCTGTATAGTGGATGGATTTGGCCTGGAAGTCATCCCAAAGATCTACTGGAGTATAATAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTATTTCAACGGAATAAAGGGAAATTCCACACAAGGCAG-TTTTTCCC--CTCCATATATAGTAAAGATTTAATGACAGTCTCTGGAAAGATTGTACTGGCAATGTTTGAAGTA-TCACATTGTCTTTTG-GGGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCTGTAATATGTGC---TATGCTTGACTGAAAAGATGCAAAATTACTTTTCCATATTCAACTGCCTCTTCGGCACTTCTCGAATTTTAACCTGTCATGGATTTTAGTGACTAAAAGGGTAGTTGTATGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTGACCATGGAAATAatctgattgattgattgg-ttttTGCTTTATCAA-GTATGTGAGATATTACATACAAAGCTTTGCTTAGTAACTCCTAATTTCGACATCTCCATCCCGGCTGCATATCCCATTCCGA-TTTCTGTTTCTCAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132869044 1154 + 135778131 TACTTTTTAAAATGTAAATAGAGTGGCTGGAAACTAAAAAAGT-AA----TCAG------------------------AAAGTAAGATCAGCTTTCTCTGCACCTGT--GTCAGCTAACCAT-AGGAATTCTGAGGAGAAAAAGTGAAACATTACTTAACATCAT----------CTATTAAGGAACTTTTTCTCTTGAGTTCTTTAATAAGTTGCTGTTTAGATTGCAAGAGGATGTTTAACATCCAGAAGCATAACCCTGAAATCTCAAGACTTCTGCTTACAATTGCCTATA-AAAGTATTCTAA--------TTTACTG--ATTGGAATGTTTTCCATATACAATTAAGAAACAATTTAGCATGTTATTATTTTAATTTTGCATTCTTCAATGTAATTTTACATCAGATTTATTGATTATAGATTTGTGTGTCTTTCTCATTATTTGGCTTCACAGTAATTCCCCAG---GATACTTTGTCCATAAAGCCACTTTAAAATGTCATCCACATCACAAATGTTACAAATCCTGTTACAGCAGTTCACCCGAGATTCTGCACACGTTTT--TCCAGTGTGCAGTGAAGTGAAGATA---ACTGAAATGCTGTATAGTGGATGGATTTGGCCTGGAAGTCATCCCAAAGATCTACTGGAGTATAATAGGGC-TTCAGACTGGATCAAATAGGAATTCTCAGTGTTTCAATGGAATAAAGGGAAATTCCACACAAGGCAG-TTTTCCCC--CTCCGTATATAGTAAAGATTTAATGACAGTCCCTGGAAAGATTGTACTGGCAATGTTTGAAGTA-TCACATTGTCTTTTG-GAGATTAATTGTTCCTAAATGTGATACGAACAAATTTCCTCAGAGCTCCTAC-GTCTTCTAAAGATAGCCGTACTATGTGC---TGTGTTTGACTGAAACGATGCAAAATGACTTTTCCATATTCAACTGTCTCTTCGGCACTTCTCAAATTTTAACCAGTAATGGATTTTAGTGACTAAAAAGGTAGTTGTACGTTGACTGGACGACAGTAAATGTTTCCATTC----TAATTAGAGAATAGCAGAATGGGAAGTGACCATGGAAATAACCTGATTGATTGATTGG-TTTTTGCTTTATCAA-GTATGTGAGATATTACATACAAAGCTTTGCTTAGTAACTCCTAATTTCAACATCTCCATCCCGGCTGCATATCCCATTCCGG-TTTCTGTTTCTTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188253662 1142 - 190850796 CACTTGTTTTGATTTAAATAGAGTGGTTGGAGGGTAAAAAA---AA----TCAG------------------------AAAGTAAGATCAGCTTTCTCTGCACCTGT--GTCAGCTAAACA--AGGAATTCCGAGGATAAAAAGTGAAACGTTACTTAACATCAT----------CTATTAAGAAGCTTTTCCTCTTAAGTTCTTGAGTAAGTTGCTGTTCAGATTGCAAGAGGATGTTTAATACCCGGAAGCATAACCCCAAAATCTCAAGTCTTCTACTTACAATTGCCTA-A-AAAATATTCTAA--------TTTACTG--ATTATAATGTCTTCGATATACAATTAAGAGACAGTTGAGCACAGTATTATTTTAATTTTGCATTCTTCAGTGTAATTTTACATCATATTTATTGATTACAGATTTGTGTGTCTTTCCCATTATTTGGCTTCACAGTAATTCCCCAG---GATGCTTTGTCTGTTACACCACTTTAAAATGTCATCCACGTCACAGATGTCAGAAATCCCGTTACAGTGGTTCACCCAAGACTCTGCACACGTTTT--TCCAGGGTGCAATGAAGCAAAGATA---ACTGAAATACTGTACAGTGGATGGATTTGGCATGGAAGTCAACCCAAAGATCTACTGGAG--CAGCAAGGC-TCCTG-CGGGATCAAATGGGAATTCTCAGTATTTCAATAGAGTAAAGGTAAATTCCACACAAGGCAG--TTTTTCC--CTCCTTATATAGTAAAGACTTCATGCCAGTCTCTGGAAAGATTGTGTTGGCAATGTTTGAAGTA-TCACATTGTCTTTTG-GGGATTAATTGTTCCTAAAAGTGATACCAAGAAATTTGCTCAGAGCTCCCAC-TTCTTCTAAAGATAGCTGTAATATGTGC---TGCACTTGACGGCAAGGATGCAAAATGACTTTTCCATATTCAGCTGTCTCTTAGGCACTACTCAAATGTTAACCAGAAATGGATTTTAGTGACGAAAAAGATAGTTGTATGTTGACTGCATGACAGTAAATGTTGCCATTC----CAATTAGAGTATAGCGGAATGGGAAGTGACCATGGAAGTAATCTGAC----TGATTGA-TTTTTGCTTTATCAG-GTATCTGAGATATTGCATACAAAGCTTTGCTTAGTAACTCCTAATTTCAATGTCTCCAACCCTGCTGCATATCCCATTCTGG-ATCCTGTTTCTCAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84734061 1114 - 129401213 CACTTTTCCTGATATACAAAGAAAACTTGGAGGGTAAACTATT-TT----CCAA------------------------AAGTTAATATAAGCTTTCTATGGGCCTATAAGTCATGTAAATAT-TGGAATTCTG-GGGTAGCAGGCTTAATGCTCCTTAATAACATTTATTTAATATTATTAAGGAGAATTTACTCTCA--TTTTTTAATAAGTGGC---TCATATAGCAAGAGGTTATTCAGTATTGCAGAGCATAAGCCCTAGATCTTGAGACTTCTAGCTTCTATT------T-AAAATATGCAAACTACTTTCTTCACTG--GCT---ATACTTTTTATGTACAATTAGAAGGGAACTAAGAAC---ATTATTGCAATTTTTCA-TCTTTGGTTTAGAATTTCATAGGATTTATTGATTACAAAGTCATGGGTCTT----ATTATGGGGCATCACAATAATT------------------TCTGCAGAACCACTCTACAATGTAATTTACATCATAAATGTTACAAATCCTGTTAGA--GGCTCA-CTGAGGTTCTGTACACATTCT--TCCAGCATGTGATGAAGGAACAATAGCTGCTGAAACACCACATCCGAGATATATTTGGCTTGGGTGAAAACTTAAAGACATGCTGGGGTATAGCCATGCTTTCAGACTGGGTTACATAGAAATATGCAAGAATTCAAGAG---AAAGAAACATTTGACATGAGATAGATTACATAC--CTCCGTATAGAGTAAAGATCTAATGAAAATCTCTAAGAAGATTGTTTTAGCCTTGAATGCAATA-TCAGATAGTCTTTGGAGGAATTAATTTTTCCTGAATGAGATGTGAATAAGTTTCCATAGAGCTCCTTC-TGTCTCT--GGATAGCTATACTGTGCACAGGAGTGCTTGTCTATAAGGATGGAAAACGGTTTTTACATGCAGGAGT-TTTCTTAAGCAACACTCACATCTCAGCTAGTAATGGATTTTTCCTACTAAAACGAT-GATGACTACTGACCAGACTACAACCAATGCTCCAATTC----ATTTT------TATCACAATAGGAGGTGACCACAAAAGTAATTTTACTTATTACTT----------------AA-ATATTTAAGCTATTAAATTAAGAGCTTTGTATCATATTGCCTAATGTCAATATCTCCAACTCACGAGATTCTCTCTTTCAAT-ATTGTGTTTCTCAT i mm10.chr8 C 0 I 2893 s canFam3.chr16 15735605 1195 - 59632846 CACTTTTCTTAATATATGTAAAAAGGTCAAAGCATAAAAAAAA-AAAAAATCAAAAACCAAAAGCCAAAAAACCCCTTAAACTAAAGTGAGCTTTCCCTGCGTCTATCAGTTAGATAAACATGAAGAATTCTGGGGATTAAAAGTTAAAGACTATTTAACATTAT----------TTATTAAGAAACTTTTTCTCTTAAATTCTTTAATAAGTGGCTCTAGAGATCACAAGGGGTTGTTTAATATCAGAAAGCATAACCCTTAAATCTCAAGACTACTCCTTAGACTTGGCTATACAAAATATTCCTC--------TTTACCAATATTGTAGTATTATCTATATATAAGTAGTAAACAATTTCACACATTTTCATTATAATTTAGCATTCTTCA-TTTGATTTTACATGGAATTTATTAATTGTAGATTCATGAGTCTTTCTCATTATTTGGCTTCACA-TAATTCCCCAATATGATGCTTTGTCTGCAAAACCACTTTAAAATGTAATCCACAGCACAAATGTCACAAATCTTGGTATAGTAGTTTGCCCAAGATTCTGCATACGTTTTTTTCCAGTGTGCAATGAAGCAGAGATA---ACTAAAACACTACACAGTGGATGGATTTGGCATGGAGATCAACTGAAAGACCTACTAGGGCATAGCAAGGC-ATCAGACTAGGTCAAATAGGAATTCACAATATTTCAA------AAAGATAAATTCCACAC-AGACAG-CTCCCCCCCACTCCATATATAGTGAAAGTTTAATGAAAATCTCTGGAATGGTTGTGTTGGCAGTACATGGAGTATTCAAATGGTCTTTTG-GGGATTAATTGTCCCTACATGTGATATGAAGAAATTTCCTTAAGGCTCCTTCTGCTTTCTATAGATAGCTGTAATATATGC---AATGCTTGATTAAAAGGATGTAAAATGACTTTTCCATACCCAAGTGTTTCATCGGCCCTACTGAGATTTTAATCAGTAACGAACTTCAGTGATGAGAAAGGTGATTATCTACAAACTGGACTGCAGTGTATGTTTCCATTCCTTACAATCAAGGAGTTGAAGAAGGGGAAGGGACCACAGAAATAATTTCGTTGaataattaattttttacttaatcaatttatttgagatatttaataaaaaGCTCTGCACAGTTACTCCAAACTTCACTATCTGCAACCCCCCGATAAATCCCTTCTAGATATTTTGTTTCTCAT i canFam3.chr16 I 194 C 0 a score=789044.000000 s hg38.chr4_KI270785v1_alt 67963 257 + 119912 CCTCTGTCTTCCCACCCCATTCCTGGATTTAAACTCTTTGAAATCAATTCTCCCTAAACACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAGTAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAACACT-TACCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTTGTGCGGAAAGCCAGTGGATTAGAGTGCAGTGGGAATCGCAGGGAAACGCCTCTGAAGG----CTTA s panTro4.chr4 190335355 253 + 193495092 CCTCTGTCTTCCCACCCCATTCCT----TTAAACTCTTTGAAATCAATTCTCCCTAAACACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAGTAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAACACT-TACCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTTGTGCGGCAAGCCAGTGTATTAGAGTGCAGTGGGAATCGCAGGGAAATGCCTCTGAAGG----CTTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195309058 257 + 198332218 CCTCTGTCTTTCCACCCCATTCCTGGATATAAACTCTTTGAAATCAATTCTCCCTAAACACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAATAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAAAATT-TACCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTTGTGCGGAAAGCCAGTGTATTAGAGTGCGGTGAGAATTGCAGGGAAATGCCTCTGAAGG----CTTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111272213 257 + 115148730 CCTCTGTCTTCCCACCCCATTCCTGGATTTAAACTCTTTGAAATCAATTCTCCCTAAACACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAGTAGGTCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAAAACT-TACCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTTGTGCGGAAAGCCAGTGTATTAGAACGCAGTGAGAATTGCAGGGGAATGCCTCTGAAGG----CTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181074065 251 + 184069350 CCTCTGTCTTCTCACCCTATTCCTGGATTTAAAGTCTTTGAAATCAATTCTC------CACCTCTAAGATTGAGTGGAAAAGCCTAGAAGGCAGCAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAGAACT-TGCCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTCGTGCGGAAAGCCAGTGTAGCAGAGCGCAGTGAGAATCGCAGGGAAATGCCTCTGAGGG----CTTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186412294 251 + 189454096 CCTCTGTCTTCTCACCCTATTCCTGGATTTAAAGTCTTTGAAATCAATTCTC------CACCTCTAAGATTGAGTGGAAAAGCCTAGAAGGCAGCAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAAAACT-TGCCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCCTCGTGCGGAAAGCCAGTGTAGCAGAGCGCAGTGAGAATCGCAGGGAAATGCCTCTGAGGG----CTTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176027640 227 + 178775436 CCTCTGTCTTCCCACCCTGTTCCTGGAATTAAAGTCTTTGAAATCAATTCTC------CACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAGCAGATCCTTGAGATTGTGGCCTTGGGGGTTTGAGGGAGACAAAACT-TGCCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGT------------------------CAGTGTAGCAGAGCGCAGTGAGAATCGCAGGGAAATGCCTCTGAGGG----CTTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132870198 251 + 135778131 CCTCTGTCTTTCCATCCTATTCCTGGATTTAAACTCTTTGAAATCAATTCTC------CACCTCTGAGATTGAGTGGAAAAGCCTAGAAGGCAGCAGATCCTTGAGATTGTGGCCTTGAGGGTTTGAGGGAGACAAAACT-TGCCAAACTTGAATTTCCCTCAACTCTG--GTTGGGTTCCTTGTTGGAGCTGCCTTGGTGCGGAAAGCCAGTGTAGTAGAGCGCAGTGAGAATCGCAGGGAAATGCCTCTGAAGG----CTTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188254804 260 - 190850796 CCTCTGTCCTCCTACTCCATTCCTGGATTTAAGCTACTTGAAATCGATTCTCCATAAACACTTCTGAGATTGAGCTGAAAAGCCTAGCAGGCAGTAGATCCTTGAGATTGTGGCCTTGAGGGTTTCAGGGAGGCAAAACTGTACCGAACTTGAATTTCCCTCAGCTC----GCTCCGTTTCTTGTGCGAGTTGCCCTCGGATGGAACCCCAGTGTGTTAGAGCACAGTGAGAATCGCAGGGGGATGCCTCTGAAGGCTTCCTTA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15736800 251 - 59632846 CTTCTCTTTTCCCATCCAGGGCCCAGATTTGCACCATTTGAAATCAGTTCTCCATAAACACATCTGAGATTAAGAGGAAAAGATAAGAAAGAAG-GGGTTCCTGCGATTGTGGTCCTGATGGTTT----GAGATAAACCTCTACC--ATGTGAGTTTTCCTCAACTCTAATGTCCAACTCC-TGTTGGAGTCGCCCTTAGGCAGAAAGCCAATACATAAAAATGCAA-GGGAATCATAGAAAAATATCACTGAAGG----TTTA i canFam3.chr16 C 0 I 211 e mm10.chr8 84735175 2893 - 129401213 I a score=723873.000000 s hg38.chr4_KI270785v1_alt 68220 227 + 119912 TCCATCAcagtggttctcaaagtgcgttctgatggtcctttgaaggtttct--gagtagctttcaggggatctgcaactcaaaacaaggcttagggtgataccaa--cattatttacccttttcactca--ttttatagcaatggcacaaaagcaatgatgcataaaactgctggtgccttagcacagatcacggtagtggcaccaagctgcagtgctggttactgtattctt--- s panTro4.chr4 190335608 226 + 193495092 TCCATTAcagtggttctcaaagtgcgttctgatggtcctttgaaggttttt---agtagctttcaggggatctgcaactcaaaacaaggcttagggtgataccaa--cattatttacccttttcactca--ttttatagcaatggcacaaaagcaatgatgcataaaactgctggtgccttagcacagatcacggtagtggcaccaagctgcagtgctggttactgtattctt--- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195309315 222 + 198332218 TCTATCAcagtggttctcaaagtgcgttctgatggttctttgaaggtttct--gagtagctttcaggggatctgcaactcaaaacaaggcttagggtgataccaa--cattatttacccttttcactcatgttttatagcaatggcacaaaagcaacgatgcataaaactgctggtgccttagcacagatcacggtagtggcaccaagctgcagtg-------gtgtgttctt--- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111272470 229 + 115148730 TCTATCAcagtggttctcaaagtgcgttctgatggtcctttgaaggtttct--gagtagctttcaggggatctgcaactcaaaacaaggcttagggttataccaa--cattatttacccttttcactcatattttatagcaatggcacaaaagcaatgatgtataaaactgctggtgccttagcacagatcacggtagtggcaccaagctgcagtggtggttactgtattctt--- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181074316 228 + 184069350 TCTATCAcagtggttctcaaagtgcgttctgatggtccttggaaggtttct--gagtagctttcaggggatctgcaactcaaaacaaggctcagggtgataccaacacattatttacccttttcactcacattttataccaatggcacaaaagcaatgatgtctaaaacggctagtgccttagcacagatcacagtagtggcaccaagatgcagtg---gttactgtattctt--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186412545 228 + 189454096 TCTATCAcagtggttctcaaagcgcgttctgatggtccttagaaggtttct--gagtagctttcagggtatctgcaactcaaaacaaggctcagggtgataccaacacattatttacccttttcactcacattttataccaatggcacaaaagcaatgatgtctaaaacggctagtgccttagcacagatcacagtagtggcaccaagatgcagtg---gttactgtattctt--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176027867 228 + 178775436 TCTatcacagtggttctcaaagtgccTTCTGATGGTCCTTGGAAGGTTTCT--GAGTAGCTTTCAGGGTATCTGCAACTCAAAACAAGGCTCAGGGTGATACCAACACATTATTTACCCTTTTCACTCACATTTTATACCAATGGCACAAAAGCAATGATGTATAAAATGGCTAGTGCCTTAGCACAGATCACAGTAGTGGCACCAAGATGCAGTG---GTTACTGTATTCTT--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132870449 228 + 135778131 TCTATCAcagtggttctcagagtgcgttctgatggtccttggaaggtttct--gagtagctttcagggtatctgcaactcaaaacaaggctcagggtgataccaactcattatttacccttttcactcacattttataccaatggcacaaaagcaatgatatataaaacggctggtgccttagcacacatcacggtagtggcaccaacatgcagtg---gttactgtattctt--- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188255064 227 - 190850796 TCTATCGcagtcattctgaaagtgcattctaatggtcctttgaaggtttct--gagtagatttcagggg-tctgcaactcaaaataatgctcagggtgatactaacacgttatttaccctttccattcatattttataccaatgacacagaagcaatgatgtataaaacaactggtgccttagcacagatcaaggtagtggcaccaagctgcagtg---gttgtttttttttt--- i calJac3.chr3 C 0 I 1458 s canFam3.chr16 15737262 232 - 59632846 TCTCTTAcagtggttctgaaagtgtgacctatgatccctctgaaggtttctgtgagtagctttcaggggatctgtgagtcaaaactattttcatggtaatactaagatatgatgtggctctttcatgaata-tttatactagtgatacaaaaacagaggtgggtgaaactgctgtcaccttagcacagatgaaggtagtggcaccagattgttgtg---attaatacacttgcatt i canFam3.chr16 I 211 C 0 e mm10.chr8 84735175 2893 - 129401213 I a score=1058872.000000 s hg38.chr4_KI270785v1_alt 68447 426 + 119912 tattgctatacatgtgcgttcaaata-aaacaaaacaaaacaaacagaacaaagcaatctgctagctttgctgaagaatattcttgatgaaacaataagaatcattaattgtattaattttggtctcggagtacacatct-----------------agaagaaacgagaagtgtaaataaa---gcacttct----gcttactgaat-acagtggatgacctaaggaaaagtctccaaccaactgtttgagg----------acaaactatcttattca-------------------------------gaccaactatggttattcagacttgcttattttgtagacatttccttgaa---aatgaagtgagcttttcacctgaagtaaaatcactaataatgtgtgttgccagcgaaaattagaattttggaaaacttgtgtctgcctctgtgaaactgactgcttccta---atacagatgtttcttataagat s panTro4.chr4 190335834 429 + 193495092 tattgctatacatgtgcgttcaaata-aaacaaaacgaaacaaacagaacaaagcaatctgctagctttgctgaagaatattcttgatgaaacaataagaatcattaattgtattaatttcggtctcggagtacacatct-----------------agaagaaacgagaagtgtaaataaa---gcacttct-actgcttactgaat-acagtgggtgacctgaggaaaagtctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------gaccaactatggttattcagacttgcttatttcgtagacatttccttgaa---aatgaagtgagcttttcacctgaagtaaaatcactaataatgtgtgttgccagcgaaaattagaattttggaaaacttgtatctgcctctgtgaaactgactgcttccta---atacagatgtttcttataagat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195309537 429 + 198332218 cattgccatacatgtgcattcaaaca-aaacaaaacaaaacaaacagaacaaagcaatctgctagctttgctgaataatattcctgatgaaacaataagaatcattaattgtattgatttcggtctcagagtacacatct-----------------agaagaaacaagaagtgtaaataaa---gcacttct-actgcttactgaat-acagtgggtgacctaaggaaaaatctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------gaagaactatggttattcagacttgcctgtttcatagacatttccttgaa---aatgaagtgagcttttcacctgaagtaaaatcactaataatgtgtgttgccagcgaaaattagaattttggaaaacttgtatctgcctctgtgaaactgactgcttccta---atacagatttttcttataagat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111272699 424 + 115148730 tattgctatacatgtgcattcaaata-aaaca-----aaacaaacagaacaaagcaatctgctagctttgctgaagaatattcttgatgaaacaataagaatcattaattgtattaatttcggtctcggagtacacatct-----------------agaagaaacgagaagtgtaaataaa---gcacttct-actgcttactgaat-acaatgggtgacttaaggaaaagtctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------gaccaactatggttattcagacttgcctatttcgtagacatttccttgaa---aattaagtgagcttttcacccgaagtaaaatcactaacgatgtatgttgccagcgaaaattataattttgaaaatcttgtatctgcctctgtgaaactgactgcttccta---atacagatttttcttataagat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181074544 419 + 184069350 tattgttatacttgtgcattcaaaca-aaaca---------aaacaaaacaaagcaatccactggctttgcttaagaatgttcttgatgaaacaataagaatcattaattgtattaatttcagtctctgagtgcacatct-----------------agaag-aatgagaagtataaataaa---gcacttct-actgcttactgaat-acagtgggtgacctaaggaaaagtctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------gaccaactatagttattcagacttgcctatttcatagacattttcttgaa---aatgaagtgagcttttcaccagaagtgaaaccactgataatgtgtgctgccagtgaaaattagaattttggaaaacttgtatctgcctctgtgaaactggttgcttccta---atacagacttttcttataagat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186412773 419 + 189454096 tattgttatacttgtgcattcaaaca-aaaca---------aaacaaaacaaagcaatccactggctttgcttaagaatgttcttgatgaaacaataagaatcattaattgtattaatttcagtctctgagtgcacatct-----------------agaag-aacgagaagtgtaaataaa---gcacttct-actgcttactgaat-acagtgggtgacctaaggaaaagtctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------gaccaactatagttattcagacttgcctatttcatagacattttcttgaa---aatgaagtgagcttttcaccggaagtgaaaccactgataatgtgtgctgccagtgaaaattagaattttggaaaacttgtatctgcctctgtgaaactggttgcttccta---atacagacttttcttataagat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176028095 419 + 178775436 TATTGTTATACATGTgcattcaaaca-aaaca---------aaacaaaacaaagcaatccACTGGCTTTGCTTAAGAATGTTCTTGATGAAACAATAAGAATCATTAATTGTATTAATTTCAGTCTCTGAGTGCACATCT-----------------GGAAG-AACGAGAAGTGTAAATAAA---GCACTTCT-ACTGCTTACTGAAT-ACAGTGGGTGACGTAAGGAAAAGTCTCCAACCAACTGTTTGAGG----------ACAAACTATGTTATTCA-------------------------------CACCAACTATAGTTATTCAGACTTGCCTATTTCAtagacattttcttgaa---aatgaagtGAGCTTTTCACCGGAAGTGAAACCACTGATAATGTGTGCTGCcagtgaaaattagaattttggaaaacttgtatctGCCTCTGTGAAACTGGTTGCTTCCTA---ATACAGACTTTTCTTATAAGAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132870677 414 + 135778131 tattgttatacatgtgcattc------aaaca---------aaacaaaacaaagcaatccactggctttgcttaagaatgttcttgatgaaacaataagaatcattaattgtataaatttcagtctctgagtgcacatct-----------------agaag-aacgagaagtgtaaataaa---gcacttct-actgcttactgaat-ccagtgggtgacctaaggaaaagtctccaaccaactgtttgagg----------acaaactatgttattca-------------------------------caccaactatagttattcagacttgcctatttcatagacattttcttgaa---aatgaagtgagcttttcaccggaagtgaaaccactgataatgtgtgctgccagtgaaaattagaattttggaaaacttgtatctgcctctgtgaaactggttgcttccta---atacagacttttcttataagat i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15737494 465 - 59632846 -----aaatgcatgtgcgcgcatgcgtacaca--------cacaca-cacacacacacacactagc-tagtttaggaatatttttgatgcag-agtaaaaattattaattttattaatttcaatctctgcatacatgtctttctaaattcttttgtgggaagaaatgggaagtacccatgagcttggacttctaactgcttactgaatcatgctggctgtcctgagtagaagtcctcaagcaagtatttgaggtgcagtctaaaccaacttcttttttcatggaacacaatttttacttggaagaatgactaatgaactacagctaatcagccttgtgtatttagtagatggttctttaaaatgaatggactaagtgtgtcatctcaaggaagacaaatagtaatgtttgttaccagtgaaaattagaagtttggaaaacttct-----------------tgactgcttcctgtatttgcaga-ttttctgataagat i canFam3.chr16 C 0 I 3955 e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I a score=108949.000000 s hg38.chr4_KI270785v1_alt 68873 48 + 119912 cagtagtaatatcaaaacgtga-ttttgtctgtattgatgaatgaaatg s panTro4.chr4 190336263 48 + 193495092 cagtagtaatatcaaaacgtga-ttttgtctgtattgatgaatgaaatg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195309966 48 + 198332218 cagtagtaatatcaaaatgtga-ttttgtttgtattgatgaatgaaatg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111273123 48 + 115148730 cagtagtaatatcaaaacgtga-ttttgtttgtattgattaatgaaatg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181074963 48 + 184069350 cagtagtagtatcaaaatgtga-ttttttttgtattgattaatgaaatg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186413192 49 + 189454096 cagtagtagtatcaaaatgtgatttttttttgtattgattaatgaaatg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176028514 48 + 178775436 CAGTAGTAGTatcaaaatgtga-tttttttggtATTGATTAATGAAATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871091 48 + 135778131 cagtagtagtatcaaaatgtga-ttttttttgtattgattaatgaaatg i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15737959 3955 - 59632846 I e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I a score=17388.000000 s hg38.chr4_KI270785v1_alt 68921 36 + 119912 tgtccatgtttggaagatctatatatttcagtaaac s panTro4.chr4 190336311 36 + 193495092 tgtccatgtttggaagatctatatacttcagtaaac i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111273171 36 + 115148730 tgtcaatgtttggaaggtctacatacttcaataaac i nomLeu3.chr7b C 0 C 0 s papAnu2.chr5 176028562 36 + 178775436 TGTCAATATTTGGAAGATCTATATACTTCAATAAAC i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15737959 3955 - 59632846 I e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I e chlSab2.chr7 132871139 0 + 135778131 C e macFas5.chr5 186413241 0 + 189454096 C e rheMac3.chr5 181075011 0 + 184069350 C e ponAbe2.chr4 195310014 0 + 198332218 C a score=1140.000000 s hg38.chr4_KI270785v1_alt 68957 67 + 119912 caatattttcttataaggtcagtagtaacatcaaa-acgtgattttgtctgt--attgatgaatgaaatc s panTro4.chr4 190336347 67 + 193495092 caatattttcttataaggtcagtagtaacatcaaa-acgtgattttgtctgt--attgatgaatgaaatc i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111273207 26 + 115148730 caatattttcc-------------------------acgtggccatgcatg------------------- i nomLeu3.chr7b C 0 C 0 s papAnu2.chr5 176028598 17 + 178775436 CAATGTTTTCC-------------------------ACATGG---------------------------- i papAnu2.chr5 C 0 C 0 s canFam3.chr16 15741914 70 - 59632846 Caagccttttttaaaagatcagttataatattaagcaagtgatttttttttttcctggactaatggaatg i canFam3.chr16 I 3955 C 0 e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I e chlSab2.chr7 132871139 0 + 135778131 C e macFas5.chr5 186413241 0 + 189454096 C e rheMac3.chr5 181075011 0 + 184069350 C e ponAbe2.chr4 195310014 0 + 198332218 C a score=386944.000000 s hg38.chr4_KI270785v1_alt 69024 199 + 119912 tgtcaatgtttggaagatctatatacttcagtaaaccaatattttccacatgaccatgtatgatattgcagaaatcatgcccca-gtaaagaa-gacctgagccagccgtatgctagagcagcggattttaatagaacggagcacaaagaa-tcatggat-atggcttcatatcccacatcgcagctgtcttttaaaaactgt s panTro4.chr4 190336414 199 + 193495092 tgtcaatgtttggaagatctatatacttcagtaaaccaatattttccacatgaccatgtatgatattgcagaaatcgtgcccca-gtaaagaa-gacctgagccagccgtacgctagagcagcagattttaatagaacggagcacaaagaa-tcacagat-atggcttcatatcccacatcgcagctgccttttaaaaactgt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195310014 200 + 198332218 tgtcaatgtttggaagatctatatacttcaatcaaccaatattttccacagggccatgcatgatattgcaaaaatcgtgcctga-gtaaaaaa-gacctgttccagctgtatgctagagcagcggattttaatagaacggatcacaaagaattcactgat-acggcttcatattccacattgcagctgtcttttaaaaactgt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111273233 136 + 115148730 --------------------------------------------------------------atattgcaaaaatcgtgcctga-gtaaaaaa-gacctgttccagctgtatgccagagcagtggattttaatagaacagagcacaaagaattcactgat-atggtttcatatttcacatcacagctgtcttttaaaaac--t i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181075011 194 + 184069350 tgtcaatatttggaagatctatatacttcaataaaccaatgttttccacatggccatgcacgatattgcaaaaatcgtgcctga-gtaaaaaa-gacctgttccagctgtatgctagagcagtggattttaatagaacagagcacaaagaattcactgat-atgatatc------cacattgcggctgtcttttaaaaactat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186413241 194 + 189454096 tgtcaatatttggaagatctatatacttcaataaaccaatgttttccacatggccatgcacgatattgcaaaaatcgtgcctga-gtaaaaaa-gacctgttccagctgtatgctagagcagtggattttaatagaacagagcacaaagaattcactgat-atgatatc------cacattgcggctgtcttttaaaaactat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176028615 136 + 178775436 -----------------------------------------------------CCATACACAATATTGCAAAAATCGTGCCTGA-GTAAAAAA-GACCTGTTCCAGCTGTATGCTAGAGCAGTGGATTTTAAT-----AGAGCACAAAGAATTCACTGAT-ATAATATC------CACATTGCAgctgtcttttaaaaactat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871139 194 + 135778131 tgtcaatatttggaagatctatatacttcaataaaccaatgttttccacatggccatgcatgatattgcaaaaatcgtgcctga-gtaaaaaa-gacctgttccagctgtatgctacagcagtggattttaatagaacagagcacaaagaattcactaat-atgatatc------cacattgcagctgtcttttaaaaactat i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15741984 197 - 59632846 tgtcaatacttggctgatctacatatcttcagaaaccagtcttttccacacagcaatgcataacattaca-aaatctggcctaaggtaaaaaatgatccattcaagttgtaaaatagagcaaaggattttaat-----gaagtatgcaaagttcattgagaatggttccagattccacactgtaactgttctttaaaaactgc i canFam3.chr16 C 0 I 461 e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I a score=892111.000000 s hg38.chr4_KI270785v1_alt 69223 377 + 119912 gaattgtcaagttttggtgtagtagtaaagaaccatatccacagttatctgaaaaggcaattaaaatacttctcctggctgggcgtggtggctcatgcctttaatctcagcactt-gggaggccaaggtgggcagatcacgaggtcaggagatggagaccatcctggccaacaaggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcgggtgcctgtagccccagctactcaggaggctgaggcaggggaattgcttgaacccaggaggcagcagaagtttcagtgagccaagattggccactgcactccagcctgggcgacagagcaagactccgtct------caacaacaacaacaacaaca------------------a s panTro4.chr4 190336613 376 + 193495092 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttctcctggctgggtgtggtggctcatgcctttaatctcagcactttgggaggccaaggtgggcagatcacgaggtcaggagatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgggtgcctgtagccccagacacttaggaggctgaggcaggggaattgcttgaacccaggaggcagcagaagtttcagtgagccaagattggccactgcactccagcctgggcgacagagcaagactccgtct------caacaacaacaacaacaac-------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195310214 384 + 198332218 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttctcctagctgggcatggtggctcatgcctttaatctcagcactttgggaagccaaggtgggcagatcatgaggtcaggagatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacaaaaattagccgagcgtggtggcgggtgcctgtagccccagctactcaggaggctgaagcaggggaattgcttgaacccgggag---gcggaggtttcaatgagccaagattggccactgcactccagcctgggcgacagagcaagactccgtct------caacaaaaacaacaacaaca---------acaacaaata i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111273369 393 + 115148730 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttatcctggctgggcgtggtggctcacgcctgtaatctcagcactttgggaggccaaggtgggcagatcacgaggtcaggagatggagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggcgggtgcctgtagccccagctactcaggaggctgaggcaggggaattgcttgaacctgggag---gcagagttttcagtgagccaagattggccactgcactccagcctgggtgacagagcaagactccgtct------caacaacaacaacaacaacaacaacaaaaacaacaaata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181075205 375 + 184069350 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttctcctggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatgaagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatggcggcaggcacctgtagtcccagctactcaggaggctgaggcaggggaattgcttgaacctgggag---gcagatgttgcagtgagccaagattggccactgcactccagcctggccgacagagggagactccatct---------------caacaacaaca---------acaacaaata i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186413435 381 + 189454096 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttctcctggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacgaggtcaggagatcgagaccatcctggccaacaaggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatggcggcaggcacctgtagtcccagctactcaggaggctgaggcaggggaattgcttgaacctgggag---gcagatgttgcagtgagccaagattggccactgcactccagcctggccgacagagggagactccatct---------caacaacaacaacaaca---------acaacaaata i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176028751 384 + 178775436 gaatTGTCAAGTTTTGGTGTAGTAGTAAAGAATCATATCCACAGTTATCTGAAAAGGCAATTAAAATACTtctcctggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggctgaggtgggcagatcacgaggtcaggagatcgagaccatcctggccaacaaggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggcggcaggcacctgtagtcccagctactcaggaggctgaggcaggggaattgcttgaacttgggag---gcagaagttgcagtgagccaagattggccactgcactccagcctggccgacagagggagactccatct------caacaacaacaacaacaaca---------acaacaaata i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871333 390 + 135778131 gaattgtcaagttttggtgtagtagtaaagaatcatatccacagttatctgaaaaggcaattaaaatacttctcctggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaagtgggcagatcacgaggtcaggagatcgagaccatcctggccaacaaggtgaaaccccatctctactaaaaatacaaaaattagccgggcatggcggcaggcacctgtagtcccagctactcaggaggctgaggcaggggaattgcttgaacctgggag---gcagaagttgcagtgagccaagattggccactgcactcccgcctggcggatagagggagactccatctcaacaacaacaacaacaacaacaaca---------acaacaaAta i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15742181 461 - 59632846 I e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I a score=294306.000000 s hg38.chr4_KI270785v1_alt 69600 106 + 119912 cttctcacttttcctcacacataactgtgtgagaatgcttttgttcatacacattaaacaa---aacttttcaaattttccattaggccagacac-taaggagatttgcg s panTro4.chr4 190336989 105 + 193495092 -ttctcacttttcctcacacataactgtgtgagaatgcttttgttcatacacattaaacaa---aacttttcaaattttccattaggccagacac-taaggagatttgcg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195310598 106 + 198332218 cttctcacttttcctcacacataactgtgtgagaatgcttttgctcatacacattaaacaa---aacttttcaaattttccattaggccagacac-taaggagatttgca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111273762 106 + 115148730 cttctcacttttcctcacacataactgtgtgagaatgcttttgttcatacacattaaacaa---aacttttcaaattttccattaggccagacac-taaggagatttgca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181075580 106 + 184069350 cacctcccttttcctcacacataactgtgtgagaatgctttagttcatgcacattaaacaa---aactcttcaaatttcccattaggtcagacac-taaggagatttgcg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186413816 106 + 189454096 cacctcccttttcctcacacataactgtgtgagaatgctttagttcatgcacattaaacaa---aactcttcaaattttccattaggtcagacac-taaggagatttgtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176029135 106 + 178775436 ctcCTCCCTTTTCCTCACACATAACTGTGTGAGAATGCTTTAGTTCATACACATTAAAcaa---aacttttcaaattttcCATTAGGTCAGACAC-TAAGGAGATTTGcg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871723 106 + 135778131 ctcctcccttttcctcacacataactgtgtgagaatattttacttcatacacattaaacaa---aacttttcaaattttccattaggtcagacac-taaggagatttgtg i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15742642 110 - 59632846 ctcttctcatttcttcagacatatatgtgtgaggatggctttgttgatacgctttaaccaaaccagcttttcagttcttctattaggtcagacacttaaagagacttgca i canFam3.chr16 I 461 C 0 e mm10.chr8 84735175 2893 - 129401213 I e calJac3.chr3 188255291 1458 - 190850796 I a score=333791.000000 s hg38.chr4_KI270785v1_alt 69706 112 + 119912 aaatgtaaaatagtgccactcttcttattcatttcttttg-aaaatatggttattttgcatgagaatatattatatgtattaacatgtaatgcgttaccatactattgttttt- s panTro4.chr4 190337094 112 + 193495092 aaatgtaaaatagtgccactcttcttattcatttcttttg-aaaatatggttattttgcatgagaatatattatatgtattaacatgtaatgcattactatactattgttttt- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195310704 110 + 198332218 aaatgtaaaatagtgccactcttcttattcattttttttt--aaatatggttattttgcatgagaatatattatatgtattaacatgtaatgcattactatactattg-tttt- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111273868 111 + 115148730 aaatgtaaaatagtgccactcttcttattcattttttttg-aaaatatggttattttgcatgagagtatattatatgtattaacatgtaatgcgttactatgctattg-tttt- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181075686 112 + 184069350 aaatgtaaaatagtgccactcttcttattcatttctttttgaaaatatggttattttgcatgataatgtattatatatattaacatgtaatgggttactatactattg-tttt- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186413922 112 + 189454096 aaatgtaaaatagtgccactcttcttattcatttctttttgaaaatatggttattttgcatgataatgtattatatatattaacatgtaatgggttactatactattg-tttt- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176029241 112 + 178775436 aaatgtaaaatagtaccactcttcttattcatttttttttgaaaatatggtTATTTTGCAtgagaatatattatatatattaacatGTAATGGGTTACTAtactattg-tttt- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871829 111 + 135778131 aaatgtaaaatagtgccactcttcttattcattttctttggaaaatatggtt-ttttgcatgagaatatattatatatattaacatgtaatgggttactatactattg-gttt- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188256749 106 - 190850796 aaatgt-aaatcgtggcactcttcttattcatctttttga-aaaatatgtttattttgcatgagca-----tatacatattaacctgtaataagttactatactattgccatt- i calJac3.chr3 I 1458 C 0 s canFam3.chr16 15742752 111 - 59632846 aaatgtaaaccaaggccattcttctcacttatctttttgggaaaattggggtattttgtaagagaatatattatatatgttaacatgtgataggttgt--tactgctg-tctct i canFam3.chr16 C 0 I 207 e mm10.chr8 84735175 2893 - 129401213 I a score=1053851.000000 s hg38.chr4_KI270785v1_alt 69818 352 + 119912 ttaaaataaata---ataaatatgtataca-----tttc-----tcaattttgaatataataaatattggtagat-atgatccacatgaacagaagcctttgcctttgcagtcttcagtattttttaagaacatata-ggggagatcctt-agactacatagtttaagaccagctgCTTTAGAGAAATACTTCTGGAAAAAATTCTACAGCAAGTAAAAAACAAAA---AACAATAAAAACCCAAACATCTCAATTTGCTATTC--------------------------TGCAAAAAATAATTTTGTAGCCTTTTCATTATTTTTT-----GTAAATAAAATTTTGCAAGTTATTTGCCATAAGAATG-A--AGATATATATACCTTCTGATTCAGTTCTAAAA s panTro4.chr4 190337206 345 + 193495092 ttaaaataaata----------tgtataca-----tttc-----tcaattttgaatatagtaaatattggtagat-atgatccacatgaacagaagcctttgcctttgcagtcttcagtattttttaagaacataca-ggggagatcctt-agactacatagtttaagacctgctgCTTTAGAGAAATACTTCTGGAAAAAATTCTACAGCAAGTAAAAAACAAAA---AACAATAAAAACCCAAACATCTCAATTTGCTATTC--------------------------TGCAAAAAATAATTTTGTAGCCTTTTCACTATTTTTT-----GTAAATAAAATTTTGCAAGTTATTTGCCATAAGAATG-A--AGATATATATACCTTCTGATTCAGTTCTAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195310814 355 + 198332218 ttaaaataaataacaataaatgtatataca-----tttc-----tcaattttgaatatagtaaatattggtagat-atgatccacatgaacagaagcctttgcctttgcagtcttcagtattttttaagaacataca-ggggagatcctt-agactacatagtttaagacctgctgCTTTAGAGAAATACTTCTGGAAAAAATTCTACAGCAAGTAAAAAGCAAAAAACAACAACAAAAACCCAAACATCTCAATTTGCTATTC--------------------------TGCAAAAAATG----TGTAGCCTTTTCATTATTTTTT-----GTAAATAAAATTTTGCAAGTTATTTGCCATAAGAATGAA--AGATATATATACCTTCTGATTTAGTTCCAAAA i ponAbe2.chr4 C 0 I 304 s nomLeu3.chr7b 111273979 357 + 115148730 ttaaaataaataacaataaatatgtataca-----tttc-----tcaattttgaatatagtaaatattggtagat-atgatccacatgaacagaagcctttgtctttgcagtcttcagtgttttttaagaacataca-ggggagatcctt-agactacatagtttaagacctgctgCTTTAGACAAATACTTCTGGAAAAAATTCTACAGCAAGTAAAAACCAAAAAACAACAATAAAAACCGAAACATCTCAATTTGCTATTC--------------------------TGCAAAAAATAATTTTGTAGCCTTTTCATTATTTTTT-----GTAAATAAAATTTTGCAAGGT-TTTGCCATAAGAATG-A--AGATATATATATCTTCTGATTCAGTTCCAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181075798 351 + 184069350 ttaaaataaataacagtaaatatttctgca-----tttc-----tcaattttgaatgtagtaaatattggtagat-atgatccacatgaacagaagc------ctttgaagtcttcagtattttttaagaatataca-ggggagatccta-agactatgtagtttaagacctgctgCTTTAGACAAATACTTCTGG-GAAAATTCTACAGCAAGTAAAAACCAAAAAACAACAATAAAACCCCAAACATCTCAATTTGCTATTG--------------------------TGCAAAAAATAATTTTGTTGTGTTTTCATTACTTTTT-----ATAAATAAAATTTTGCAAGTTATTTACCATAAGAATG-A--AGATATATATACCTTCTGATTCGGTTCCAAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186414034 351 + 189454096 ttaaaataaataacagtaaatatttctgca-----tttc-----tcaattttgaatgtagtaaatattggtagat-atgatccacatgaacagaagc------ctttgaagtcttcagtattttttaagaatataca-ggggaggtccta-agactacgtagtttaagacctgctgCTTTAGACAAATACTTCTGG-GAAAATTCTACAGCAAGTAAAAACCAAAAAACAACAATAAAACCCCAAACATCTCAATTTGCTATTG--------------------------TGCAAAAAATAATTTTGTTGTGTTTTCATTACTTTTT-----ATAAATAAAATTTTGCAAGTTATTTACCATAAGAATG-A--AGATATATATACCTTCTGATTCGGTTCCAAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176029353 351 + 178775436 ttaaaataaataacaataaatatttatgca-----tttc-----tcaattttgaatataataaatattggtAGAT-ATGATCCACATGAACGGAAGC------CTTTGAAGTCTTCagtattttttaagaatataCA-GGGGAGATCCTA-AGACTATGTAGTTTAAGACCTGCTGCTTTAGACAAATACTTCTGGaaaaaattctacagaaagtaaaaaccaaaaaacaacaataaaaacccaaacatctcaatttgctattg--------------------------tgcaaaaaataattttgtcgtgttttcattatgtttt-----ataaataaaattttacaagttATTTGCCA-AAGAATG-A--AGATATATATACCTTCTGATTCAGTTCCAAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132871940 348 + 135778131 ttaaaataaataacaataaata----tgca-----tttc-----tcaattttgaatatagtaaatattggtagat-atgatccacatgaacagaagc------ctttgaagtcttcagtattttttaagaatataca-ggggagatccta-agactatgtagtttaagacttgctgCTTTAGACAAATACTTCTGGAAAAAATTCTACAGCAAGTAAAAACCAAAAAACAACAATAAAAACCCAAACATCTCAATTTGCTATTG--------------------------TGCAAAAAATAATTTTATCATGTTTTCATTATTTTTT-----ATAAATAAAATTTTGCAAGTTATTTGCCATAAGAATG-A--TGAGATATATACCTTCTGATTCAGTTCCAAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188256855 340 - 190850796 ttaaaataaata-------atatatgtaca-----tttc-----tcagttttgaatgtagtaaatattggtagat-atgatccacacgaacaaaagc------ttttgtagccttcagtattttttaagaataaaaa-ggggagatccttcagactgcattgttttagacctgctgCTTTAGACAAATACTCCTGGAAAAAATTCCACAGCAAGTAAAAAAC-------AACAAAAAAACCCCAAATCTCTCAGTTTGCTATTC--------------------------AGCAAAAAATAATTTTGTAGTGTTTTCatta-ttttt-----ataaataaaattttGCATGTCATTTGCCATAAAAATG-AAGAGAGATATATACTTTCTGATCTAGTTCCAAAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15743070 374 - 59632846 ttaaaaaaaaTAATAAAAAAAAATAAAATaaaatgttcccggtattaatttctaacacagtaaatattgtgatatgataatccacataaacaaaagc------ttttgtggttctcaatactttttaaaaatgtaaagggggatctcctg-aggtttcaaaatttaagaattattgCATTATTCAAATACTTACGGAAAACATTCTAAAGCAAATTAAAGGGGAAA-------------------ATGTCTCATTTTGGTATTCAACAGGGCTATCAAATCTAATGAAATAGTAAAAAATAACTTTGTGGCATTTTCATTGTTTTTTTTTCCACAAACAAAATTTTAGAAGTTATTCGCCACCAAAATG-A--AG--ATATACACTTGCCTATTTAGTTCCAAAA i canFam3.chr16 I 207 C 0 e mm10.chr8 84735175 2893 - 129401213 I a score=1779056.000000 s hg38.chr4_KI270785v1_alt 70170 598 + 119912 GATTCCTGtaattataattgtgctagataatatata--------------------------------ataataatTGGATTAATCAAATTGTCATGCCTCACAATTTTTAACTGAATTTTTTGGTGTCTATTAATTCTTTAAAAAATAAATGTATGCTATGTTATGACACC-CACCTTGCATTCCACAACACC--ATTCCATTCTGTATTTCCAACAAGATGCTCAGCACTAAACAGCATAGAGTAGGGTGTCCCTCTAAGCCCTGGCCAGCGAGGAGGCCTGCTGAGAACTCACCTTGTGTGTGGGACGGttgtttgttttttgcttgtttctt------------------------------tTGGAGCTccagatccctgt-ctgtgcgtgagttcccatccgccagctgctgtgggtgctgactgcacaggggctgcagctgcagccttggaaggacagcccttggtctag---gggagctgccttgtgctggaggcgatggtgccgttcccagtgacccgcagccaatggctgatggatgcaggtatgaaag----gcccctggcctccttggagg--------acct----actgt------------------------------------------------------------------------------cggtaagacctaccctctggtgccatttttatgctccacagctctccaagcacccggcaggggctggatcacaactcaa s panTro4.chr4 190337551 598 + 193495092 GATTCCTGTAATTATAATTGTGCTAGATAATATATA--------------------------------ATAATAATTGGATTAATCAAATTGTCATGCCTCACAATTTTTAACTGAATTTTTTGGTGTCTATTAATTCTTTAAAAAATAAATGTATGCTATGTTATGACACC-CACCTTGCATTCCACAACACC--ATTCCATTCTGTATTTCCAACAAGATGCTCAGCACTAAACAGCATAGAGTAGGGTATCCCTCTAAGCCCTGGCCAGCGAGGAGGCCTGCTGAGAACTCACCTTGTGTGTGGGACGGTTGTTTGTTTTTGGCTTGTTTCTT------------------------------TTGGAGCTccagatccctgt-ctgtgcgtgagttcccatccgccagctgctgtgggtgctgactgcacaggggctgcagctgcagccttggaaggacagcccttggcctag---gggagctgccttgtgctggaggcgatggtgccgttcccagtgacccgcagccaatggctgatggatgcaggtatgaaag----gcccctggcctccttggagg--------acct----tctgt------------------------------------------------------------------------------aggtaagacctaccctctggtgccatttttatgctccacagctctccaagcacccggcaggggctggatcacaactcaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195311473 598 + 198332218 GATTCCCGTAATTATAATTGTGCTAGATAATATATA--------------------------------ATAATAATTGGATTAATCAAA-TGTCATGCCTCAAAATTTTTAACTGAA-TTTTTGATGTCTATTAATTCTTTAAAAAATAAATGTATGCCATGTTATGACACC-CACCTTGCATTCCACAACACC--ATTCCATTCTGTATTTCCAATCAGATGCTCCGCACTAAACAGCATAGAGTAGGGTATCCCTCTAAGCCCTGGCCAGCGAGGAGGCCTGCTGAGAACTCATCTTGTGTGTGGGATGGTTGTTTGTTCTTTGCTTGTTTCTT------------------------------TTGGAGCTccagatccctgt-ctgtgcatgagttcccatccgccagctgctgtgagtgctgactgcacaggggctgcagctgcagccttggaaggacagcccttggcctggggtggggggtgccttgtgctggaggcaatggtgccgttcccagtggcccgcagccaatggctgatggatgcaggtgtgaaag----gccccttgcctccttggagg--------a-ct----actgt------------------------------------------------------------------------------agataagacctaccctctggtgccatttttatgctccacagctctccaagcaccaggcaggggctggatcacaactcaa i ponAbe2.chr4 I 304 C 0 s nomLeu3.chr7b 111274336 598 + 115148730 GATTCCTGtaattataattgtgctagataatatata--------------------------------ataataatTGGATTAATCAAATTGTCATGCCTCAAAATTTTTAACTGAATTTTTTGATGTCTATTAATTCTTTAAAAAATAAATGTATGCCATGTTATGACACC-CACCTTGCATTCCACAACACC--ATTCCATTCTGTATTTCCAATGAGATGCTCGGCACTAAACAGCATAGAGTAGGGTATCCCTCTAAGCCCTGGCCAGCGAGGAGGCCTGCTGAGAACTCACCTTGTGTGTGGGGCGGTTGTTTGTTCTTTGCTTGTTTCTT------------------------------TTGGAGCTCCAGATCCCTGT-CTGTGTGTGAGTTcccatccgccagctgctgtgggtgctgactgcacaggggctgcagctgcagccttggaaggacagcccttggcctag---gggagctgccttgtgctggaggcgatggtgctgttcccagtggcccgcagccagtggctgatggatgcaggtatgaaag----gcgccttgcctccttggagg--------acct----actgt------------------------------------------------------------------------------aggtaagacctaccctctggtgtcatttttatgctccacagctcttcaagcaccaggcaggggctggatcacaactcaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181076149 621 + 184069350 GATTGCTGTAATTGTAATTGCGCTAGATAATATATA--------------------------------ATAATCAATGGATTAGCCAAATTGTCATTCCTCAAAATTTTTAAT-----TTTTTGGTGTCTATTAATTCTTTACAAAATAAATGTATGCTACTTTATGACACC-CACCTTGCATTCCACAACACCATATTCCATTCTGTATTTCCAGTGAGATGCTCAGCACTAAACAGCATAGAGTAGGGTATTCCTCTAAGCCCTGGCCAGCGAGGAGG-CTGCTGATAACTCACCTTGTGTGGGGGACAGTCATTTGCTTTTTGTTTGTTTCTT------------------------------TTGGAGCTccagatccctgt-ctgtgcgtgagttcccatccaccagctgctgtgggtgctgactgcacaggggctgcagctacaggcctgaaaggacggctcttggcctag---gggagctgccttgtgctggaggcgatggtgccattcccagtggcctgcagccaatggctgatggatgcaggtatgaaag----gcctcttgcctccatggaggtaagacctaccctcttactgtaagacctacccatgg---------------------------------------------------------------aggtaagacttaccctctggtgcaatttttatgctccacagctctccaagcaccaagcagggcctagatcacaactaaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186414385 606 + 189454096 GATTGCTGTAATTGTAATTGCGCTAGATAATATATA--------------------------------ATAATCAATGGATTAGCCAAATTGTCATTCCTCAAAATTTTTAAT-----TTTTTGGTGTCTATTAATTCTTTACAAAATAAATGTATGCTACTTTATGACACC-CACCTTGCATTCCACAACACCATATTCCATTCTGTATTTCCAGTGAGATGCTCAGCACTAAACAGCATAGAGTAGGGTATTCCTCTAAGCCCTGGCCAGCGAGGAGG-CTGCTGATAACTCACCTTGTGTGGGGGACAGTCATTTGCTTTTTGTTTGTTTCTT------------------------------TTGGAGCTccagatccctgt-ctgtgcgtgagttcccatccaccagctgctgtgggtgctgactgcacaggggctgcagctacaggcctgaaaggacggctcttggcctag---gggagctgccttgtgctggaggcgatggtgccgttcccagtggcctgcagccaatggctgatggatgcaggtatgaaag----gcctcttgcctccatggaggtaagacctaccctcttactgt------------------------------------------------------------------------------aggtaagacctaccctctggtgcaatttttatgctccacagctctccaagcaccaagcagggcctagatcacaactaaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176029704 684 + 178775436 GATTGCTGTAATTGTAATTGTGctagataatatata--------------------------------ataatcaatGGATTAGCCAAATTGTCATTcctcaaaatttttaat-----tttttggtgtcTATTaattctttacaaaataaatgtatgctaCTTTATGACACC-CACCTTGCATTCCACAACACCATATTCCATTCTGCATTTCCAATGAGATGCTCAGCACTAAACAGCATAGAGTAGGGTATTCCTCTAAGCCCTGGCCAGCAAGGAGG-CTGCTGATAACTCACCTTGTGTGGGGGACAgtcatttgctttttgtttgtttctt------------------------------ttggagCTCCAGATCCCTGT-CTGTGCGTGAGTTCCCATCCACCAGCTGCTGTGGGTGCTGACTGCACACGGGCTGCAGCTACAGGCCTGAAAGGACGGCTCTTGGCCTAG---GGGAGCTGCCTTGTGCTGGAGGCGATGGTGCCATTCCCAGTGGCCTGCAGCCAATGGCTGATGGATGCAGGTATGAAAG----GCCCCTTGCCTCCATGGAGGTAAGACCTACCCTCTTACTGTAAGACCTACCCATGGAGGTAAGACCTACCCTCTTACTGTAAGACCTACCCATGGAGGTAAGACCTACCCTCTTACTGTAGGTAAGACCTACCCTCTGGTGCAATTTTTATGCTCCACAGCTCTCCAAGCACCAAGCAGGGCCTAGATCACAACTAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132872288 594 + 135778131 GATTGCTGTAATTGTAATTGTGCTAGATAATATATA--------------------------------ATAATCAATGGATTAGCCAAATTGTCATTCCTCAAAATTTTTAAC-----TTTTTGGTGTCTATTAATTCTTTACAAAATAAATGTGTGCTACTTTATGACACC-CACCTTGCATTCCACAACACCCTATTCCATTCTGTATTTCCAGTGAGATGCTCAGCACTAAACAGCATAGAGTAGGGTATTCCTCTAAGCCCTGGCCAGCGAGGAGG-CTGCTGATAACTCACCTTGTGTGGGGGACAGTCGTTTGTTCTTTGTTTGTTTCTT------------------------------TTGGAGCTccagatccctgt-ctgtgcgtgagttcccatccaccagctgctgtgggtgctgactgcacaggggctgcagctacaggcctgaaaggacggctcttggcctag---gggagctgccttgtgctggaggcgatggtgccattcccggtggcctgcagccaatggctgatggatgcaggtatgaaag----gccccttgcctccatggagg--------accc----actgt------------------------------------------------------------------------------aggtaagacctaccctctggtgcaatttttatgctccacagctctccaagcaccaagcagggcctagatcacaactaaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188257195 570 - 190850796 --TATCTGTAATTAAAATTGGGATAGATAATATATA--------------------------------ATAATCAATGGGTTAGTCAAATTGTCTTTCCTCAAAATTTTTGACTGAATTTTTTGGTGTCta-taattttttaaaaaattaatGTATGCTATGTTATGATGAA-CACCTTGCATTTCATGATGAC--ATTCCATTCTGTGTTTCCAGTGGCATGCCTCACACTAAACAACAT--------------TTCCGAGCCCTGGCCAGGGACTAGGCCTGCTGAGAACCCAGCTTGTGTTGGGGACGG-----------TTGCTTGTTTCTT------------------------------TTGGAACTCCAGATCCCTGT-CTATGCACGAGTTcccttccaccagctgctgtgggtgctgacagcacaggggctgaagctgcagccttaggaggattgcccttggcctag---gggagctacctggtgctggaggtgatggtgccattcccggcagcctgcagccaatggctgacggatgcaggtatgaaag----accccttgcgtctagggagg--------acct----accgt------------------------------------------------------------------------------aggtaagatctactctctggtgcaatgtttatgctccacggctctccaagcaccaggcaggggctagatcacaactaaa i calJac3.chr3 C 0 C 0 s canFam3.chr16 15743444 621 - 59632846 GATT-CTATAATTATCATTGTGAAGGATAATATGTAATTATGTAAATTGTAATGAGAAAAATATTACCATAATCAGAAGACTAATCAAATTGTCTTCTCTTAAAATTTCTCACTGAA-TGTGTAGTGCCTGTCATTTCTCTTT--TATAAATGCATGCCAGATTATCACACAGCTTCTTGCATGGCAGG-------CTGGGGCTCTCAATTTCCAATGAGGTGCTCAGCAGTAAATAGCACAGAA-AGGATATCCCTCCAAGCCTCGGCCAGTGAGAAGACCTACTGAGAACTCCCCTTGGGTATCAGGAGGTAGTTTTGCATTTGTTTGTTTCCTGTTGGAACAAGTCATCTGTACTGGACATTACTGGTGCCTCAGGTCCCTTTGCTGTACTGGAGCTGCCATCTTCTA-CTGCCATGGCCATTGAC--------------AGCTTCAGCCTTTA-----------------TGA---AGGATCTGATTTCCCCAGAAGGTTCT-GTGC-ATGCTCAGTGAcctgcagccattggctgagtgatat-ggcataaggggccagcctcttgcccccaagcagg--------aggt----tctct------------------------------------------------------------------------------aggcagaacctactctgaggtgcaaggttgactttacagagctttcctaggatcaggctgaaactagatcacaactaaA i canFam3.chr16 C 0 I 212 e mm10.chr8 84735175 2893 - 129401213 I a score=1050525.000000 s hg38.chr4_KI270785v1_alt 70768 363 + 119912 atcacactctgcctggct-tttccccttccctattct-ctcccccactttcccccagcttcctcctgggtgcagttcctt-aataaTAATCCTTCAGAGCCAGAGACAAGAATTTTTGTTCTGAATATCCCACCTTAGATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGGGTGAGGGATTTGGGCCAGCGGATGGGGCGTT--------TGAATGGGGACCAATGAGGGTGTGAACA-TTCCATTATAAACATCATTCTTT--CCTTTTATATCCTTAACTAGGACTATACTTTTATAACCTAAACTTTTGTCATCATTGATGTGATAAGTGTAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GCTTATACCTTTTT s panTro4.chr4 190338149 363 + 193495092 atcacactctgcctggct-tttccccttccctattct-ctccccgactttcccccagcttcctcctgggtgcagttcctt-aataaTAATCCTTCAGAGCCAGAGACAAGAATTTTTGTTCTGAATATCCCACCTTAGATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGGGTGAGGGATTTGGGCCAGCGGATGGGGCGTT--------TGAATGGGGACCAATGAGGGTGTGAACA-TTCCATTATAAACATCATTCTTT--CCTTTTATATCCTTAACTAGGACTATAGTTTTATAACCTACACTTTTGTCATCATTGATGTGATAAGTGTAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GCTTATACCTTTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195312071 358 + 198332218 atcacactctgcctggct-ttttcccttccctattct-ctcccccactttctcccagcttcctcctgggtgccgttcctt-aataaTAATCCTTCAGAGCCAGAGACAAGAATTTTTGTCCTGAATATCCCACCTTAGATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGGATGAGGGATTTGGGCCAGCGGATGGGGCGTT--------TGAGTGGGGACCAATGAGGGTGTGAATA-TTCCATTATAAACATCATTCTTT--CCTTTTATATCCTTAACTATGACTATACTTTTATAACCTAAACTTTTGTCATCAT-----TGATAAGTGTAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GTTTATACCTTTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111274934 363 + 115148730 atcacattctgcctggct-tttcctcttccctattct-ttcccccacttttccccagcttcctcctgggtgcagttcctt-aataaTAATCCTTTGGAGCCAGAGACAAGAATTTTTGTCCTGAATATCCCACCTTAAATGACTGAACTGAGACATAATTCCATTTGTTCTTGGGGGTGAGGGATTTGGGCCCGCGGATGGGGCGTT--------TGAGTGGGGACCAACGAGGGTGTGAACA-TTCCATTATAAACATCATTCTTT--CCTTGTATATCCTTAACTATGACTGTACTTTTATAACCTAAACTTTTGTCATCATTGATGTGATAAGTGTAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GCTTATACCTTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181076770 362 + 184069350 atcacactctgcttggct-tttcaccttccctattct-ttccccaactttaccccaggttcctcctgggtgctattcctt-aataaTCATCCTTCAGGGTCACAGACAAGAATTTTTGTCCTGAATATCCCACCTTAAATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGG-TGAGGGATTTGGGCCCCCAGATGGGGCCTT--------TGAGTGAGGACCAATGAGGGTGTGAACC-TTCCATTATAAACATTATTCTTT--CCTTTTATATCCTTGACTATGACTATACTTTTATAACCTAAGTTTTTGTCATCATTGATATGATAAGTGTAAGGAATTCATTGTAAATGCAAAA--------------------------------------------------GCTTATACTATTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186414991 362 + 189454096 atcacactctgcttggct-tttcaccttccctattct-ttccccaactttaccccaggttcctcctgggtgctgttcctt-aataaTCATCCTTCAGGGCCACAGACAAGAATTTTTGTCCTGAATATCCCACCTTAAATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGG-TGAGGGATTTGGGCCCCCAGATGGGGCCTT--------TGAGTAAGGACCAATGAGGGTGTGAACC-TTCCATTATAAACATTATTCTTT--CTTTTTATATCCTTGACTATGACTATACTTTTATAACCTAAGTTTTTGTCATCATTGATATGATAAGTGTAAGGAATTCATTGTAAATGCGAAA--------------------------------------------------GCTTATACTATTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176030388 362 + 178775436 ATCACACTCTGCTTGGCT-TTTCACCTTCCCTATTCT-TTCCCCAACTTTACCCCAGGTTCCTCCTGGGTGCTGTTCCTT-AATAATCATCCTTCAGGGCCACAGACAAGAATTTTTGTCCTGAATATCCCACCTTAAATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGG-TGAGGGATTTGGGCCCCCAGATGGGGCCTT--------TGAGTAAGGACCAATGAGGATGTGAACC-TTCCATTATACacattattcttt--ccttttatatCCTTGACTATGACTATACTTTTATAACCTAAGTTTTTGTCATCATTGATGTGATAAGTGTAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GCTTATACCTTTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132872882 360 + 135778131 atcacactctgcttggct-tttccccttccctattct-ttccccaactttaccccaggttcctcctgggtgctgttcctt-aataaTCATCCTTCAGGGCCACAGACAAGAATTTTTGTCCTGAATATCCCACCTTAAATGACTGAACTGAGACATAATTCCGTTTGTTCTTGGGG-TGAGGGATTTGGGCCCCCAGATGGGGCCTT--------TGAGTAAGGACCAATGAGGGTGTGAACC-TTCCATTATAAACATTATTCTTT--CCTTTTATATCCTTGACTATGACTATA-TTTTATAACCTAAGTTTTTGTCATCGTTGATGTGATAAGTATAAGGAATTCATTGTAAATG-GAAA--------------------------------------------------GCTTACACTGTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188257765 301 - 190850796 attacattctgcttgact-ctttcccttctctattc----------------------------------------CCTA-AATGATAACCCTTCAGAGTCAGAGACAAGAATTTTTGTCCTGAATGTCCCACCT--------------------TCATTTCATTTGTTCTTGGAGGTGAGGGATTTGGGCCACCAGATGGGGCGCC--------TGAGTGGGGACCCATGAGGGTGTGAACATTTCCATGATAAACATCATTCTTT--CATTTTACATCCTTAATTATGACTATAGTTTTATAACCTAAATTTGTGTCA---TTGGTGTGATAAG-GGAAGGAATTCATTGTAAATGTGAAG--------------------------------------------------GCTTATACCTTTTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15744277 396 - 59632846 aCCACTTCCTACATGGCTCTTTCTCTTTCCCTATTCTGTTTGCTTGCTTTCCTTCAGATTACTCTTGGAAGCAATTCCTCAAACAATAATCCGTCAGGGTCTGAG-TAAGAATCC---------ATGTCCCACTTT---------------GACAGAATTCCTTTCGTTCTTGAGGGTGAGGGAGTAGGGGGAGCAGGTGAGGCATTTTGGGACCTGAGTTGGGATCAGTGGGGG-GAGGACC-TCCC---TGGCACATCACTGTTCTGCATTTTATCTCCTTAATTACAATTGTAATTTTATAACCCAAATTTTCTTTGTCATTCAGATGA-AAGCATAAGGGATTTGTAATAAAAGTAAAgtgccactgtttgatctgtgttaaggtcccccaacagttttacccatcattgcttttgcatcatt i canFam3.chr16 I 212 C 0 e mm10.chr8 84735175 2893 - 129401213 I a score=680829.000000 s hg38.chr4_KI270785v1_alt 71131 217 + 119912 ----GAAAAC-TTGCACTGAAAGagtggttctcaactgggatggttttatccccgcgggggggacatttggcaatttttgattgtcacaaatgggggaag---------ggctgtagtgcataagggccggggatgctgctacacatcctactaagtacagacacagcc---ctctaaaat---------gaagaattatccagcccataatatcaacagtgcta---agcctaggaaatcTGATT s panTro4.chr4 190338512 217 + 193495092 ----GAAAAC-TTGCACTGAAAGagtggttctcaactgggatggttttatccctccgggggggacatttggcaatttttgattgtcacaaatgggggaag---------ggctgtagcgcataagggccggggatgctgctacacatcctactaagtacagacacagcc---ctctaaaac---------gaagaattatccagcccataatatcaacagtgcta---agcctaggaaatcTGATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195312429 217 + 198332218 ----GGAAAC-TTGCACTGAAAGagtggctctcaactgggatggttttatccccccgggggggacatttggcaatttttgattgtcacaaatggggaaag---------ggctgtagtgcataagggcagtggatgctgctacacatcctactaagtacagacacagcc---ctctaaaac---------gaagaattatccagcgcataatatcaacagtgcta---agcctaggaaatcTGATT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111275297 216 + 115148730 ----GAAAAA-TTGCTCTGAAAGagtgattctcaactgggatgattttatcccccggggtgggacatttggcaatttttgattgttgctaatggggaaag---------ggctgtagtgcatatgggc-ggggatactgctacacatcctactaagtacaggcacagcc---ctctaaaac---------aaagaattatccagcccataatgtcagcagtgcta---agcctgggaaatcTGATT i nomLeu3.chr7b C 0 I 304 s rheMac3.chr5 181077132 216 + 184069350 ----GAAAAC-TTTCTCTAAAAGagttgttctcaactgggatgattttatccccttgggtgggacatttggcaatttttgattgttgcaaatgggggaag---------ggctgtagtgcataagggc-tgggatgaggctacacatcctgctatgtacagacacagcc---ctctaaaac---------aaagaattatccagcccataatgtcagcagtgcta---agcctgggaaatcTGACT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186415353 216 + 189454096 ----GAAAAC-TTTCTCTAAAAGagttgttctcaactgggatgattttatccccctgggtgggacatttggcaatttttgattgttgcaaatgggggaag---------ggctgtagtgcataagggc-tgggatgaggctacacatcctgctatgtacagacacagcc---ctctaaaac---------aaagaattatccagcccataatgtcagcagtgcta---agcctgggaaatcTGACT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176030750 216 + 178775436 ----GAAAAC-TTTCTCTAAAAGAGTTGTTCTCAACTGGGATGATTTTATCCCCCTGGGTAGGACATTTGGCAATTTTTGGTTGTTGCAAATGGGGGAAG---------GGCTGTAGTGCATAAGGGC-TGGGATGAGGCGACACATCCTGCTATGTACAGACACAGCC---Ctctaaaac---------aaagaattatccagcccataATGTCAGCATTGCTA---AGCCTGGGAAATCTgact i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132873242 210 + 135778131 ----GAGAAC-TTTGACTAAAAGagttgttctcagctgggatgatcttatccccctgggtgggacatttggcaa-ttttgattgttgcaaatgggggaag---------ggctgtagtgcataa------gggatgaggctacacatcctgctaggtacagacacagcc---ctctgaaac---------aaagagttatccagcccataatgtcagcagtacta---agcctgggaaatcTGACT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188258066 210 - 190850796 ----AAAAAC-TTTCACTGAACGagtggttctccactgggatgattttagccccctg----ggacacttggcaatttttgattgtcacaaatgggggaag---------ggctggagcacacaagggccagggatgctgctagacaccgtaccgtgtatagacaaggcc---ctccaaaac---------aaag--ttatccactccataatgttaacagtgc-a---agcctgggaaatcTGATT i calJac3.chr3 C 0 C 0 s mm10.chr8 84738068 225 - 129401213 ----GAAAACACTCCCCTCAAATagtgattctcagctgccatgattttgtcccc----ggggaacatttggtaagtttttattgtcacagatgtggagaaaataatatcgatcctaacggagagaggacttggttattgctgtgtagtctacaactggcaga-acaatt---tcccgactc---------aaggaattatcccctccacaaattcattggtgctaatgagccttagaaatcTGATT i mm10.chr8 I 2893 C 0 s canFam3.chr16 15744673 236 - 59632846 agtataaatc-ttggtgaaaaaTaatggttttcagctggggtgattttgtcctatag---gagacatttggcaagttttagttgtcacaaatgggggaga-gtacgagtgcccatacggggtaggagc-agggatcctggtaactatcctacaatgcacaga-acagtctatccccaaatccgggagtgaaaagaatcacatggcccgcaatgtcaacagtgctg---aagcccaggaaccttATT i canFam3.chr16 C 0 C 0 a score=142071.000000 s hg38.chr4_KI270785v1_alt 71348 44 + 119912 GAAAGT--------AAAAAAATTTTCCAATATAGTGTT-------------CATTAATAATGGAG s panTro4.chr4 190338729 44 + 193495092 GAAAGT--------AAAAAAATTTTCCAATGTAGTGTT-------------CATTAATAATGGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195312646 44 + 198332218 GAAAGT--------AAAAAAATTTTCCAATATAGTGTT-------------CATTGATAATGGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111275817 44 + 115148730 gaaagt--------aaaaaaATTTTCCAATATAGTGTT-------------CATTAATAATGGAG i nomLeu3.chr7b I 304 C 0 s rheMac3.chr5 181077348 44 + 184069350 GAAAGT--------AAAAAAATTTTCCAATATAGTGTT-------------CATTAATAATGGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186415569 44 + 189454096 GAAAGT--------AAAAAAATTTTCCAATATAGTGTT-------------CATTAATAATGGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176030966 44 + 178775436 gaaagt--------aaaaaaattttccaatataGTGTT-------------CATTAATAATGGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132873452 43 + 135778131 GAAAGT---------AAAAAATTTTCCAATATAGTGTT-------------CATTAATAATGGAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188258276 65 - 190850796 GAAAGTAAAAAAAAAAAAAAAATTTCCGATCTAGTACTAATTCCAATATAGTATTAATAATGGAG i calJac3.chr3 C 0 I 312 s mm10.chr8 84738293 39 - 129401213 -ATGGT---------AAAATACTTCCCAATATAGTGCA-------------CCC---TAATGGAG i mm10.chr8 C 0 C 0 s canFam3.chr16 15744909 40 - 59632846 AAAAGT---------AAAAAAATTTCTAATCCAATGTT-------------CGTTAATAGAC--- i canFam3.chr16 C 0 C 0 a score=3910478.000000 s hg38.chr4_KI270785v1_alt 71392 1116 + 119912 TGTAGCCTTTCCA----------------------CAAAAACTATTTGTGTAACTCAAATG---ACAGAAATAAAGAC----------ATA-----------AT-TATTTGTCCTCCTTA---AAAGATATGATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG--G---AAAAAAAACACTTCATGCTAGAAACTATTCAGCTTCATTGAGTTTCC-CCGGAAATTGACAA--GTGATGAAAGCAGAG---CTGTTTGTG------TTCGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACCAGAGCAGAAACTTGAAACAAGTACTCCTCCCATATGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTAATATTCTGGCCATAATATTCCTGGAATGTTATGGGGCCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAATCGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGTTTAAGTTAAAAAATGATTACTTTGAAGTATCACTATGTACTATATCTTAAAAGAATAAAACATTAATAG-AAATC----AATTAAT---------TATCCTTTGAC-TTTGACCTGGAATGGCT-ACTGCTGAGTGCTGTGTATTGATCACAGAAATCTTGAACTTCTCTTTTAGTGT---TGTTAGTGGGGCTACCGGCTATCGGGTGCATGTAGATATTAATTTTCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-CGGCTCAAGGCATTTTCAGACTCTTTG--AAAATAAAATCTTCTTTCT----CTTCTCTATAAAATCTTATCTACTTCTAATTTTTTGTCTTTACTCCATACTATCCCCAAA-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CCTGTTCATGAACATATTTGTGTATGAA----CTTTCTTTTACAGTAAAA---TAATTGG-CAGTGTGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCCGGCTTTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATC---TTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGACTGGTTTTAAGCCAAATATTCTCACCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT s panTro4.chr4 190338773 1116 + 193495092 TGTAGCCTTTCCA----------------------CAAAAA---TTTGTGTAACTCAAATT---ACAGAAATAAAGAC----------ATA-----------AT-TATTTGTTCTCCTTA---AAAGATATGATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG--G---AAAAAAAACACTTCATGCTAGAAACTATTCAGCTTCATTGAGCTTCC-CCGGAAATTGACAA--GTGATGAAAGCCGAG---CTGTTTGTG------TTCGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACCAGAGCAGAAACTTGAAACAAGTACTCCTCCCATATGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTAATATTCTGGCCATAATATTCCTGGAATGTTATGGAGCCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAATCGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGTTTAAATTTAAAAATGATTACTTTGAAGTATCACTATGTACTATATCTTAAAAGAATAAAACATTAATAG-AAATC----AATTAAT---------TATCCTTTGAC-TTTGACCGGGAATGGCT-ACTGCTGAGTGCTGTGTATTGATCACAGAAATCTTGAACTTCTCTTTTAGTGT---TGTTAGTGGGGCTACCGGCTACCGGGTGCATGTAGATATTAATTTTCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-CGGCTCAAGGCATTTTCAGACTGTTTG--AAAATAAAATCTTCTTTCT----CTTCTCTATAAAATCTTTTCTACTTCTAATTTTTTGTCTTTACTCCATACTATCCTCAAA-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CCTGTTCATGAACATATTTGTGTATGAA----CTTTCTTTTACAGTAAAA---TAATTGG-CAGTGCGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCTGGCTTTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCCACTTCTGTAGTGTGTCCTGTCTTTGCAGGTAGGAACTCCAGGTGACTGGTTTTAAGCCAAATATTCTCACCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195312690 1127 + 198332218 TGTAGCCTTTCCA----------------------CAAAAACTATTTGTGTAATTCAAATT---ACAGAAATAAAGAC----------ATA-----------AT-TATTTGTCCTCCTTA---GAAGATATGATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG--GGAAAAAAAAAACACTTCATGCTAGAAAGTATTCAGTTTCATTGAGCTTCC-CCAGAAATTGACAA--GTGATGAAAGCAGAG---CTGTTTGTG------TTCAAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACCAGAGGAGAAACTTGAAACAAGTACTCTTCCCATATGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTAATATTCTGGCCATAATATTCCTGGAATGTTATGGGGCCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAATCGTCTTTGTGCTTACGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGTTTAAATTAAAAAATGATTACTTTGAAGTATCACTATGTACTATATCTTAAAAGAATAAAACATTAATAC-AAATC----AATTAAT---------TATCCTTTGAC-TTTGACCTGGAATGGCT-ACTGCTGAGTGCTGTGTATTCATCACAGAAATCTTGAATTTCCCTTTTAGTGT---TGTTAGTGGGGCTACCGGCTACCGGGTGCATGTAGATATTAATTTTCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-TGGCTCAAGGCATTTTCAGACTCTTTGAAAAAAAAAAATCTTCTTTCT----CTTCTCTATAAAATCTTTTCTACTTCTAATTTTTTGTCTTTACTCCATACTATCCCCAAA-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTCATGAACATGTTTGTGTACGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTCTGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCCAGCTTTGTT--ACCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCCACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGCCAAATATTCTCACCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111275861 1123 + 115148730 TGTAGCCTTTCCA----------------------CAAAAACTATTTGTGTAACTCAAATT---ACAGAAATAAAGAC----------ATA-----------AT-TATTTGTCCTCCTTA---GAAGATATGATTATATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG--G--AAAAAAAAACACTTCATGCTAGAAAGTATTCAGCTTCATTGATCTTCC-CCAGAAATTGACAA--GTGATGAAAGCAGAA---CTGTTTGTG------TTCAAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACCAGAGCAGAAACCTGAAACAAGTACTCCTCCCATGTGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAACATGTTGAA-AGGCAACAGCCTGATATTCTGGCCATAATATTCCTGGAATGTTATGGGGCCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAATAGTCTTTATGCTTATGAGTAGTTTGTGAAATAACTCCATTAAGGACTTTTCTGTTCTGGTTTAAATTAAAAAATGATTACTTCGAAGTATCACTATGTACTGTATCTTAAAAGAATAAAACATTAATAG-AAATC----AATTAAT---------TATCTTTTGAC-TTTGACCTGGAATGGCT-ACTGATGAATGCTGTGTATTCATCACAGAAATCTTGAACTTCTCTTTTAGTGT---TGTTAGTGGGGCTACCGGCTACCGGGTGCATGTAGATATTAATTTTCT---CTATCTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-TGACTCAAGGCATTTTCAGACTCTTTG--AAAAAAAAATCTTCTCTCT----CTTCTCTATAAAATCTTTTCTACTTCTGATTTTTTGTCTTTACTCCATACTATCCCCAAA-ACTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTCATGAACATGTTTGTGTATGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTGCGCCTTTGGGC--TCA--AGTTTGTCTTTTGTTTTCCGGCTTTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCCACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGTCGAATATTCTCACCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181077392 1133 + 184069350 GGCAGTCTTCCCA----------------------CAAAAACTATTTGTGTAACTCAAGTT---ACAGAAATAAAGACT--------TATA-----------AT-TATTTGTCCTCCTTA---GAAGATATGATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGGAAAAAAAAAAAAAACACTTCATGCTAGAAAGTATTCGGTTTCATTGATCTTCC-CCAGAAATTGACGAGGGTGATGAAAGCAGAA---CTGTTTATGTTAGTTTTAGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACTAGAGCAGAAATTTTAAATAAGTACTCCTCCCATCTGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTGATATTCTGGCCATAGTATTCCTGGAATGTTATGGGGTCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAACAGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGCTTAAATTAAAAAATGATTACTTTGAAGTATCACCATGTACTATATCTTAAAAGAATAAAACATTAATAC-AAATC----AATAAAT---------TGTCCTTTGAC-TTTGACCTGGAATGGCT-ACTGCTGAGTGCTGTGTATTCATCACAGAAATCTTGACCTTCCCTTTCAGTGT---TGTTAGTGGGGCTACCGGCTATCGGGTGCATGTAGATATTAATTTGCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-TGGCTCAAAGCATTTTCAGACTCTTTA-AAAAAAAAAATCTTCTTTCT----CTTCTCTATAAAATCTTTTCTACTTCTAATTTTTTGTCTTT-----ATACTATCCCCAAG-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTTATGAACATGTTTATGTATGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTGCGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCTGGCTCTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCTACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGCCAAATATTCTCAGCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186415613 1129 + 189454096 GGCAGTCTTCCCA----------------------CAAAAACTATTTGTGTAACTCAAGTT---ACAGAAATAAAGACT--------TATA-----------AT-TATTTGTCCTCCTTA---GAAGATATGATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG---AAAAAAAAAAACACTTCATGCTAGAAAGTATTCAGTTTCATTGATCTTCC-CCAGAAATTGACGAGGGTGATGAAAGCAGAA---CTGTTTATGTTAGTTTTAGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACTAGAGCAGAAATTTTAAATAAGTACTCCTCCCATCTGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTGATATTCTGGCCATAGTATTCCTGGAATGTTATGGGGTCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAACAGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGCTTAAATTAAAAAATGATTACTTTGAAGTATCACCATGTACTATATCTTAAAAGAATAAAACATTAATAC-AAATC----AATAAAT---------TGTCCTTTGAC-TTTGACCTGGAATGGCT-ACTGCTGAGTGCTGTGTATTCATCACAGAAATCTTGACCTTCCCTTTCAGTGT---TGTTAGTGGGGCTACCGGCTATCGGGTGCATGTAGATATTAATTTGCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-TGGCTCAAAGCATTTTCAGACTCTTT--AAAAAAAAAATCTTCTTTCT----CTTCTCTATAAAATCTTTTCTACTTCTAATTTTTTGTCTTT-----ATACTATCTCCAAA-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTTATGAACATGTTTATGTATGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTGCGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCTGGCTCTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCTACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGCCAAATATTCTCAGCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176031010 1131 + 178775436 GGCAGTCTTTCCA----------------------CAAAAACTATTTGTGTAACTCAAGTT---ACAGAAATAAAGACT--------TATA-----------AT-TATTTGTCCTCCTTA---GAAGATATGATtgtatctgtt---ttcttcttggtACATCTcataagaagg--gaaaaaaaaaatcacttcatgcTAGAAAGTATTCAGTTTCATTGATCTTCC-CCAGAAATTGACGAGGGTGATGAAAGCAGAA---CTGTTTATGTTAGTTTTAGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACtagagcagaaattttaaataagtacTCCTCCCATCTGCTCATGTTTTCATTTAAGACAAAGtgtaagagaaaatattgaa-aggcAACAGCCTGATATTCTGGCCATAGTATTCCTGGAATGTTATGGGGTCATTCTCACTCAGCACTTGGCATA------TTTTCACCTTTAGCAAAACAGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCtggcttaaattaaaaaatgattacttTGAAGTATCACCATGTACTATatcttaaaagaataaaacattaataC-AAATC----AATTAAT---------TGTCCTTTGAC-TTTGACCTGGAATGGCT-ACTGCTGAGTGCTGTGTATTCATCACAGAAATCTTGACCTTCCCTTTCAGTGT---TGTTAGTGGGGCTACCGGCTACCGGGTGCATGTAGATATTAATTTGCT---CTAACTCATTCTTGTCACAGTGATATTtccattgcattccatcctgTT-TGGCTCAAGGCATTTTCAgactctttg-aaaaaaaaaatcttctttct----cttctctataaaatcttttctacttctaattctttgtcttt-----ATACTATCCCCAAA-TCTGAGAGCAAAAATCCCTTTTGGT-TT--CTTGTTCATGAACATGTTTATGTGTGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTGCGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCTGGCTCTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCCACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGCCAAATATTCTCAGCAAAAGTAGAATT-GACCCACAAATACTTTTGATTCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132873495 1121 + 135778131 GGCAGTCTTTCCA----------------------CAAAAACTATTTGTGTAACTCAAGTT---ACAGAAATAAAGACT--------TATA-----------AT-TATTTGTCCTCCTTA---GAAGATATAATTGTATCTGTT---TTCTTCTTGGTACATCTCATAAGGAGG---AAAAAAAAAAACACTTCATGCTA-AAAGTATTCAGTTTCATTGATCTTCC-CCAGAAATTGACGAGGGTGATGAAAGCAGAA---CTGTTTATGTTAGTTTTAGAGTTCCTGTTTATGTCAAATGAATTTGAATAAAACAACTAGAGCAGAAATTGTAAATAAGTACTCCTCCCATCTGCTCATGTTTTCATTTAAGACAAAGTGTAAGAGAAAATGTTGAA-AGGCAACAGCCTGATATTCTGGCCATAGTATTCCTGGAATGTTATGGGGTCATTCTCACTCAGCACTTGG--------------CACCTTTAGCAAAACAGTCTTTGTGCTTATGAGTAGTTTGTGAAATAACTGCATTAAGGACTTTTCTGTTCTGGCTTAAATTAAAAAATGATTACTTTGAAGTATCACCATGTACTATATCTTAAAAGAATAAAACATCAGTAC-AAATC----AATTAAT---------TATCCTTTGAC-TTTGACCTGAAATGGCT-ACTGCTGAGTGCTGTGTATTCATCACAGAAATCTTGACCTTCCCTTTCAGTGT---TGTTAGTGGGGCTACCGGCTACCGGGTGCATGTAGATATTAATTTGCT---CTAACTCATTCTTGTCACAGTGATATTTCCATTGCATTCCATCCTGTT-TGGCTCAAGGCATTTTCAGACTCTTTG-AAAAAAAAAATCTTCTTTTT----CTTCTCTATAAAATCTTTTCTACTTCTAATTCTTTGTCTTT-----ATACTATCCCCAAA-TCTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTCATGAACATGTTTATGTATGAA----CTTTCTTTTACAGTAAAAGATTAATTGG-CAGTGCGCCTTTTGGC--TCA--AGTTTGTCTTTTGTTCTCTGGCTCTGTT--ATCTCT-----CTTGGCCCAAGTTCAAGCATCTCCTTCAGCATCCACTTCTGTGGTGTGTCCTGTCTTTGCAGGTAGGAACTCAAGGTGTCTGGTTTTAAGCCAAATATTCTCAGCAAAAGTAGAATT-GACCCATAAATACTTTTGATTCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188258653 1112 - 190850796 TGTAGCCTTTCCA-----------------------GAAATCTATTGGTGTAACTCAAATG---ACAGAAATAAAGACA--------TAAA-----------AT-TATTTGTTCTCCTTA---GAAGATATGATTGTGTCTGCT---TTCTTCGTGGTACATCTCATAAGGAAA---CAAAACCACAGCACCTCCTGCTAGAAAGTATTCAGTTTCATTGATCCTCC-CCAGAAGCTGGCAAGAGTCATGAAAGCAGA-------CTTGTGTCAGTTTTAGAGTTCTTGTTTATGTCAAATGAAGTTGAATAAAAGGACTAGAGCAGAAACTTTAAACGAGTACTCCTCCCATATACTCACGTTTTCATTTAAT-CAAAGCGTAAGAGAAGATGTTGAA-AGGCGACAGCCTAATATCCTGGCCATAATGCTTCTGGAATGTTGTGGGGCCATTCTCACTCGGTACTTGGCATA------TTTTCACCTTAGGCAGAATAGCGTTTGTGCTTACGAG--GTTTGCAAAATAACCGCCTTAAGGACTTTTCTGTTCTGGTTTAAATTTAAAAATGATTACTTTGAA----------GTACTATACCTTAAAAGAATAAAGCATCAATAC-AAACC----ATTTAAC---------TAGCCTCTGACGTTTGATCTTGAATGGCT-GCTGCTGAGTGCTGTGTGTCCACCACAGAAGCCTTGAAATTTCCCTTTAGTAT---TGTTAATGGGGCTACCGGCCGCCAGGTGCACACAGATACTGATTTCCT---CCAACTCATTCTTGTCACAGCGATATTTCCATTGCATTCCATCCTGCT-CGGCTCAAGGCCTTTTCAGAC--TTTG-AAAAAAAGAACCTTCTTTTT----CTTCTCTATAAAATCTTTTCTACTTCTAATTCTTTGTCTTTACTCCATATTCTCCCCAAATTCTGAGAGCAAAAATTCCTTTTGGT-TT--CTTGTTCATGATCATGTTTATGTATGAA----CTT--TTTCACAGTAAAAGATGAATTGG-CAGTATGCCTTTTGGC--TTG--ACTCTGTCTCTTGTGCTCCGAC--TGTT--ATCTCT-----CCTGGCCCAAGTTCAGGCAGAT-CTTCAGCATCCACTCCTGTGATGTGTCCTGCCTTCGCAGGTAGGAACTCAAGGTGTCTGGTCTTAAGCCAAATATTCTCACCAAAAGTAGAACT-GATCCACAAATGCCTTCAATTCT i calJac3.chr3 I 312 C 0 s mm10.chr8 84738332 1137 - 129401213 TGTGTCCTTAAaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaCCTCAAGGTATATATGAACGCTTGCAA-CATTTGTCCTCCATA----------------TATCCATTTG-TCCTTCTGGGCATATTTCATGGCTTTG--G--------GAATCCCTCAAAATAGAATATAATCAATTTCATT-ATTTTTC-CTGGGATCTGGCAAGAGCAATGAGAACTGAC-TTCTGTTTGTGTGAGTTTGAGAGGTCTGGCTTATGTCAAAGGAGTTTGGATAAAATGACTCCAGCGAAGACATTAGCCACATATGTGCCTCACGTTCTTATGCTTCCATTTAAGACAGAGC---AGTGAAGACATGGGA-AGCCAAC---------CTCAGCACATTGTGTTTCCAAAATGCGAGGGGCTAGTTCTTA----GCACTTGGCATACTTCATTTTTTTCTTTTAGCACGATAAAGCTTGAGCTTATGAGCAGTTTGTGAAATAATTGCATCAAAGACCTTTCTGATCTAATTTGAATAAAGATTTGAATATTTTGAAATGTCAGGATGTGCTTAATCTTCAAAGAATACTGCATTAATACAAAATC----AGTTAATGATTTAGTCTCTTCTTTGAC-TTTGGCCTTGAAGGGCTCATTTCAGCCTAATGTATTATCATCACTGAAATCAAAGGCTTTACC--CAGTGTAAATGTTACTGGGGCTTCT-------------------ACATTCATTTT----------TTATTGTTGTTGT--TGTTATTTGCTTCTAACTTCTTACTGCCACAGCTCCAGGCATGTTCAGATTCTTTGAAAGACTAGAAATTTCTCTTT----CTTCCTTTTAAAATTCCGTTTACTTC------TCTGTCTTG-----ATTCTGTC-TCAAC-TCTGAGAATCAAAATTCATTTTGGC-TTTGTTTGCTCATGAAAGTGTTTATGTATGAGCAACCTGGCTTGTGTAGTAGACAATGTATTGG-CACTGGGCCCTTTGGCTGTGA--AGGCTGTCCTTTGTTCCCTGGCTCAGATAGATCTCTCCTGGCTTGGCTCAGGCTCAAGCATCTCTGTTTGCATCTCCTCCTCTAGTGTGGCCTGTTGCTGCAGGTAGGTGCTATCAGTCTCTGGCCCTAAGCC-AATGTACTCAG---ATGTGGAAAG-GACCCACGGAATCCTTGGGTTCT i mm10.chr8 C 0 I 6 s canFam3.chr16 15744949 1117 - 59632846 TATGGCCTTTCC-----------------------TAAGAGCCATTTGTGTGACTCAAATT---GCAGAAGTCGAGATC--------TACT-----------TTATATTTATCCTCCTTAGGAGAAGATATGATTATGTCTGTTTATTTTTTCTTGGCACAGCTTATAGGAAGT-------------------CATGGGAGAAAATAATCCATTTCATTGATTTTCCTCCAGAAATTAACAAAAGTAATGAAGGGAGAAATTCTATTTATT--AGCTTCAGAGTTCTGGTTTATGTCAAATTAATTTGACTGAAATGACTAGACCAAAAACTTTAAACAGGTTCTCCTCCC-------CATGTTTTTATTTACAACAGAGGCCTGGAGAAAATGTCGAACAGGCAACAGTTTT---------------TACTCCTCTAATTTTATGGAGCCACCCTCC----GCACTGAGTGCA------TTTGCACCTTTTAACACAAAGCCACAGTGTTTTCGAGTAGTTCATAAGATAATTGCACTAGAGTCCTTTCTGTTCTGGTTCGAATGAAAACTTA--TACTTTGAAGTGTTATGATACACTTACTTTTCAAAGAATAAAACATTAATAT-AAATCAGTTAATTAAT---------TAGTTTTTGCC-TTTCACCTTGAATGGCT-CATCCTGAGTGCCACGTATTCATCATGGAAATCAGGATCTCTTCACTTCTTCTAAGTGTTAGGAAGGCTACTGGTTGAC-------TCTAGATGTTTTTTTTCTTCACTAAATTGTCCTTGTTGTAGTGA-AATTCCACTATGTGTTATCCCCTTTTGACTCAAAGCATTTTCAAATTCTTTTCTGAAGAAGTTTCTTTTTTTTTCTCTTTCTCTAAAAAAGTTCTTCTATTTCTAATTATTTGCCTTCACTCCAGTCTATCCCCAAA-TCTGGGAGTGGAAATTCCTTTTTGTCTT--CCTGTTCACAAATGTGCTTATATATGAAATGTCTCACTTTTATAATAAAAGATTGATCGGCCCATAGGCCTTTTGGC--TCAATAGCTTGTCTTTTGTTCTCTGGATCTATT--ATCTCT-----CCTGGCCCAAGGTCAAGCATCTCCTTTAGCATCTACTTCCGTGATGTGTCCTGTCTTTGCAGGTAAGAACTCTAGGTGTCTGGTCTTAAGCCAACTATTCTCACCATAAGTAGAACCAGCCCCGTAAATTCCTTTGATTCT i canFam3.chr16 C 0 C 0 a score=11615.000000 s hg38.chr4_KI270785v1_alt 72508 4 + 119912 Attc s panTro4.chr4 190339889 4 + 193495092 Attc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195313817 4 + 198332218 Attc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111276984 4 + 115148730 ATAt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181078525 4 + 184069350 ATTC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186416742 4 + 189454096 ATTC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176032141 4 + 178775436 ATTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132874616 4 + 135778131 ATTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188259765 4 - 190850796 ATTC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15746066 4 - 59632846 GTCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84739469 6 - 129401213 I a score=154559.000000 s hg38.chr4_KI270785v1_alt 72512 309 + 119912 ttttttttttttttttttt------gagacggagtctggctctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaagctctgcctcccaggttcccgccattctcctgcctcagcctc-ccgagtagctgggactacaggcgccccccaccacgcctggctaattttttgtatttttagt-tagacgaggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcccgtctcggcctcccagagtgttgggattacaggcttgagccaccgagcccggcTGATTCTATTT s panTro4.chr4 190339893 314 + 193495092 ttttttttttttttttttt--ttttgagacggagtctcgctctgtcgcccaggctggagtgcggtggcgccatctcggctcactgcaagctccgcctcccgggttcccgccattctcctgcctcagcctc-ccgagtagctgggactacaggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccgtctcggcctcccagagtgttgggattacaggcttgagccaccgagcccggcTGATTCTATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195313821 307 + 198332218 tttttttttttttttt---------gagatggagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcaggctccgcctcccgggttcccaccattctcctgcctcagcctc-ctgaatagctgggactacaggcacctgccaccgcgcccggataattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgccctcgtgatccgcccgtctcggcctcccagagtgttgggattacaggcgtgagccaccgagcccggctGATTCTGTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111276988 317 + 115148730 ttttttcttttttctttttttttttgagacggagtctcgctctgtcgcccagtctggagtgcagtggcacaatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctctccgagtagctgggactacaggcgcctgccaccacgcccggctaattttttgtatttttaatagagacagggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgtctcgacctcccagagtgttgggattacaggcgtgagccaccgagccctgcTGATTCTATTT i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15746070 0 - 59632846 C e mm10.chr8 84739469 6 - 129401213 I e calJac3.chr3 188259769 0 - 190850796 C e chlSab2.chr7 132874620 0 + 135778131 C e papAnu2.chr5 176032145 0 + 178775436 C e macFas5.chr5 186416746 0 + 189454096 C e rheMac3.chr5 181078529 0 + 184069350 C a score=20475.000000 s hg38.chr4_KI270785v1_alt 72821 5 + 119912 TTAAA s panTro4.chr4 190340207 5 + 193495092 TTAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195314128 5 + 198332218 TTAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111277305 5 + 115148730 TTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181078529 5 + 184069350 TTAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186416746 5 + 189454096 TTAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176032145 5 + 178775436 TTAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132874620 5 + 135778131 TTAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188259769 5 - 190850796 TTAAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15746070 5 - 59632846 TTAAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84739469 6 - 129401213 I a score=730159.000000 s hg38.chr4_KI270785v1_alt 72826 193 + 119912 GAAGCTCTTCTTTAACTTCTCTCATTTACAGTGGACTACATATTTTGTAAGGGCTTCAGTAATGGATGAAGCATGAATATGTTCCAGACATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATAAATTTCTCAGTCTTGTTTGTCCAGTGAATTTGAAA s panTro4.chr4 190340212 193 + 193495092 GAAGCTCTTCTTTAACTTCTCTCATTTACAGTGGACTACATATTTTGTAAGGGCTTCAGTAATGGATGAAGCATGAATATGTTCCAGACATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATAAATTTCTCAGTCTTGTTTGTCCAGTGAATTTGAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195314133 193 + 198332218 GAAGCTCGTCTTCAACTTCTCTTATTTACAGTGGACTGCATATTTTGTAAGGGCTTCAGTAATGGATGAAGCATGAATATGTTCCAGACATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATAAATTTCTCAGTCTTGTTTGTCCAGTGAATTTGAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111277310 193 + 115148730 GAAGCTTGTCTTCAAGTTCTCTCATTTACAGTGGACTACATATTTTGCAAGGGCTTCAGTAATGGATGAAGCATGAATATGTTCCAGACATTTTAAAGGGAAATATAC----TGAAAATCGAGTCATGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATAAATTTCTCAGTCTTGTTTGTCCAGTGAATTTGAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181078534 192 + 184069350 GAAG-TCGTCTTCAACTTCTCTCATTTACAGTGGACTACATATATTGCGAGGGCTTCAGTAATGGAGGAAGCATGAATATGTTCCAGATATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGGTGCA---TTTTTCTCCCCCTTCATAAATGGCAATACATTTCTCAGTCTTGTTTGTCCAGTGAATTTAAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186416751 192 + 189454096 GAAG-TCGTCTTCAACTTCTCTCATTTACAGTGGACTACATATATTGCGAGGGCTTCAGTAATGGAGGAAGCATGAATATGTTCCAGATATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGGTGCA---TTTTTCTCCCCCTTCATAAATGGCAATACATTTCTCAGTCTTGTTTGTCCAGTGAATTTAAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176032150 192 + 178775436 GAAG-TCGTCTTCAACTTCTCTCATTTACAGTGGACTACATATATTGCGAGGGCTTCAGTAATGGAGGAAGCATGAATATGTTCCAgatattttaaagggaaatatAC----TGAAAATTGAGTCGTGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATACATTTCTCAGTCTTGTTTGTccagtgaatttaaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132874625 192 + 135778131 GAAG-TCGTCTTCAACTTCTCTCATTTTCAGTGGACTACATATATTGCGAGGGCTTCAGTAATGGAGGAAGCATGAATATGTTCCAGATATTTTAAAGGGAAATATAC----TGAAAATCGAGTCGTGGTTGCA---TTTTTCTCCCCCTTCATAAATGGCAATACATTTCTCAGTCTTGTTTGTCCAGTGAATTTCAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188259774 193 - 190850796 GAAGCTCATCTTCAACTTTTCTCACTTACAGTGGGCTACATATTTTGTAAGGGCTTCAGTAGTGGATAAAGCATGAACGTGTTCCAGGCATTTTAAAGGGAAATATAC----TGAAAGTCGAATCGTGGCTGCA---TTTTTCTCCCCCTTCATAAATGGCAGTACGTTTCTCAGTTACGTTTGTCCAGTGAATTTGAAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84739475 192 - 129401213 GAAGATCATCTTTAAATTCCCTAGTTTACAGTAGAC--CATGTACTGTAAGGGTTGATGTTATGGATAAA-CATGAACATGTTCTGAGTATTTTGAAGAGAAATACACCTTGTGTGACTTGAATAATACATACC---ATTCTTTTGTCTGTTGTAGATTAAAAAAAA--TCCTAGTTATGTTCTATCTTTGAGTTTGAAA i mm10.chr8 I 6 I 1633 s canFam3.chr16 15746075 196 - 59632846 GAAGCTCATCTTCAGCTTCTCTGGCTTACTGTGGATTACATAT--TGCAAGGATTTAGGTAATGGATGAAGCATGAATATGTTCCAGGCATTTTGAAAGGAAATATAC--TCTGAGAGTTGAATGGCAGGTACATTTTTTTTTTTCTCCTGCAGAAATCACAGGAAATTTCTCAGTCATGTCCTTTCAGTGAGTTTGAAA i canFam3.chr16 C 0 C 0 a score=187500.000000 s hg38.chr4_KI270785v1_alt 73019 67 + 119912 AATTCGCCCAAAAAGTACAAATGGAATGATGGTCTATTTCATTGTTTTCAAAAT--------T-TTTTTTTT---AAAC s panTro4.chr4 190340405 68 + 193495092 AATTAGCCCAAAAAGTACAAATGGAGTGATGGTCTATTTCATTGTTTTCAAAAA--------AATTTTTTTT---AAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195314326 70 + 198332218 AATTAGCCCAAAAAGTACAAATGGAGTGATGGTCTATTTCATTGTTTTCAAATT--------T-TTTTTTTTTTAAAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111277503 66 + 115148730 AATTAGCCCAAAAAGTACAAATGGAGTGATGGTCTATTTCATTGTTTTC-AATT--------T-TTTTTTTT---AAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181078726 75 + 184069350 AATTAGCCCAAAAAGTACAAACAGAGTGATGGTCTATTTCATTGTTTTCAAATGtttatttat-ttattttt---taat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186416943 75 + 189454096 AATTAGCCCAAAAAGTACAAACAGAGTGATGGTCtatttcattgttttcaaatgtttatttat-ttattttt---taAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176032342 75 + 178775436 aattagcccaaaAAGTACAAACAGAGTGATGGtctatttcattgttttcaaatgtttatttat-ttattttt---taat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132874817 71 + 135778131 AATTAGCCCAAAAAGTACAAACGGAGTGATGGTCTATTTCATTGTTTTCAAATG----TTTAT-TTATTTTT---TAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188259967 61 - 190850796 AATTAGCCCAAAGAGTACAAACGGAGTCATGGTTTATTCCATTGTTGTGAAGTT--------T-------TT---AAAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15746271 69 - 59632846 AGTGAACACAATAAATACAAATGGAGTCATGGTCTATTTCATTGCTTTGAAATG------TCT-TTTTTTTT---AAAC i canFam3.chr16 C 0 C 0 e mm10.chr8 84739667 1633 - 129401213 I a score=1745881.000000 s hg38.chr4_KI270785v1_alt 73086 600 + 119912 AGAGATTTTTAAAAtttaatttaatttaaagttccggggtacctgtgcaggtttgttacataggtaaacatgtgccatggtagtttgctgcacctaccaacccatcacctaggtatgaagcatggcatgtattagctatttttcctgatgctctccacccgccccccacctagtt--------ccttccctgacaggccccagtgtgtgttgttcccctccctgtgtccatgtgttctcactgttcagctcccacttataagtaagaacttgtggtgtttggttttctgttcctgagttagtctgctgaaggtaatggcttccagctccatccatgtgtctgcaaaggacatgatctcattcc---ttatagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgttgggcatttgggttgattccatgtctttgcaactgtgaatagtgctgcaatgaacatgtatgtatgtatgtgtgcaagtatctttataacacaatgatttatattccttgagtatatacccagtaatgggatttgtggatcaaatggtgtttctggttctaaatctttgaggaatcactaa s panTro4.chr4 190340473 600 + 193495092 AGAGATTTTTAAAAtttaatttaatttaaagttccagggtacctgtgcaggtttgttacataggtaaacatgtgccatggtagtttgccgcacctaccaacccatcacctaggtatgaagcatggcatgtattagctatttttcctgatgctctccacctgccacccacctagtt--------ccttccctgacaggctccagtgtgtgttgttcccctccctgtgtccatgtgttctcactgttcagctcccacttataagtaagaacttgtggtgtttggttttctgctcctgagttagtctgctgaaggtaatggcttccagctccatccatgtgtctgcaaaggacatgatctcattcc---ttacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgttgggcatttgggttgattccatgtctttgcaactgtgaatagtgctgcaatgaacatgtatgtatgtatgtgtgcaagtatctttataatacaatgatttatattccttgagtatatacccagtaatgggattggtggatcaaatggtgtttctggttctaaatctttgaggaatcactaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195314396 600 + 198332218 AGAGATTTTTAAAATCTAAtttaatttaaagttctggggtacctgtgcaggtttgttacataggtaaacatgtgccatggtagtttgctgcacctaccaacccatcacctaggtacgaagcatggcatgtattagctatttttcctgatgctctccactcgctccccacctagtt--------cctttcctgacaagccccagtgtgtgttgttcccctccctgtgtccatgtgttctcactgttcagctcccacttataagtaagaacttgtggtgtttggttttctgttcctgagttagtctgctgaaggtaatggcttccagctccatccatgtgtctgcaaaggacatgatctcattcc---ttacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgttgggcatttgggttgattccatgtctttgcaattgtgaatagtgctgcaatgaacatgtatgtatgtatgtgtgcaagtatctttataatacaatgatttatattccttgagtatatacccagtaatgggattggtggctcaaatggtgtttctggttctaaatctttgaggaatcactaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111277569 600 + 115148730 AGAGATTTTTAAAAtttaatttaatttaaagttccggggtacctgtgcaggtttgttacataggtaaacatgtgccatggtagtttgctgcacctaccaacccatcacctaggtatgaagcatggcatgtattagctatttttcctgatgctctccacccgccccccacctagtt--------ccttccctgacaggccccagtgtgtgttgttcccctccctgtgtccatgtgttctcactgttcagctcccacttataagtaagaacttgtggtgtttggttttctgttcctgagttagtctgctgaagataatggcttccagctccatccatgtgtttgcaaaggacatgatcttattcc---tcacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggttgattccatgtctttgctgttccgaatagtgctgcaatgaacatgtatgtatgtatgtgtgcatgtatctttataatacaatgatttatattccttgagtatatacgcagtaatgggattggtggatcaaatggtatttctggttctaaatctgtgaggaatcactaa i nomLeu3.chr7b C 0 M 100 s rheMac3.chr5 181078801 593 + 184069350 aCAGATTTTAAAAAtttaatttactttgaagttccagggtacctgtgcaagtttgttacgtaggtaaacatgtgccatggtagtttgctgcacctaccaacctatcacctaggtattaagcacggcatgtattagctatttttcctgatgctttccacctgcccccaacccagtt--------ccttccctgtcaggccccagtgtgtgttgctcccctccctgtgtccatgtgttctcactgttcaactcccacttataagtaagaacttgcagtgtttgcttttctgttcctgcgttagtttgctgaggataatggcttccagctccatccatgtctctgcaaaggacatgatctcattcctttttacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggttgattccatgtctttgctattgtgaatagtgctgcaatgaaca----------taggcgtgcatgtatctttacagtacaatgacttacattccttgagtatatacacagtaacaggattggtggatcaaatggtatttctggttctaaatctttgaggaatcaaaaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186417018 593 + 189454096 ACAGATTTTAAAAAtttaatttactttgaagttcccgggtacctgtgcaggtttgttacgtaggtaaacatgtgccatggtagtttgctgcacctaccaacctatcacctaggtattaagcacggcatgtattagctatttttcctgatgctttccacctgcccccaacccagtt--------ccttccctgtcaggccccagtgtgtgttgctcccctccctgtgtccatgtgttctcactgttcaactcccacttataagtaagaacttgcagtgtttgcttttctgttcctgcgttagtttgctgaggataatggcttccagctccatccatgtctctgcaaaggacatgatctcattcctttttacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggttgattccatgtctttgctattgtgaatagtgctgcaatgaaca----------taggcgtgcatgtatctttacagtacaatgacttacattccttgagtatatacacagtaacaggattggtggatcaaatggtatttctggttctaaatctttgaggaatcaaaaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176032417 593 + 178775436 acagattttaaaaatttaatttactttgaaGTTCcagggtacctgtgcaggtttgttacgtaggtaaacatgtgccatggtagtttgctgcacctaccaacctatcacctaggtattaagcacggcatgtattagctatttttcctgatgctttccACCCGCCCCCAACCCAGTT--------CCTTCCCTgtcaggccccggtgtgtgttgctcccctccctgtgtccttgtgttctcactgttcaactcccacttataagtaagaacttgcggtgtttgcttttcagttcctgcattagtttgctgaggataatggcttccagctccatccatgtctctgcaaaggacatgatctcattcctttttacagctgcatagtattctatggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggttgattccatgtctttgctattgtgaatagtgctgcaatgaaca----------taggtgtgcatgtatctttacagtACAATGACTTACATTccttgagtatatacccagtaacaggattggtggatcaaatggtatttctggttctaaatctttgaggaatcaaaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132874888 593 + 135778131 ACAGATTTTAAAAAtttaatttactttgaagttccagggtacttgtgcaggtttgttacgtaggtaaacatgtgccatggtagtttgctgcacctaccaacctatcacctaggtattaagcatggcatgtattagctatttttcctgatgctttccacccgcccccaacccagtt--------ccttccctgacaggccccagtgtgtgttgctcccctccctgtgtccatgtgttctcactgttcaactcccacttataagtaagaacttgtggtgtttgcttttctgttcctgcattagtttgctgaggataatggcttccagctccatccatgtctctgcaaaggacatgatctcattcctttttacagctgcatagtattctgtggtgtatatgtaccacattttctttatccagtctatcattgatgggcatttgggttgattctatgtctttgctattgtgaatagtgctgcaatgaaca----------taggtgtgcatgtatctttacagtacaatgacttacattccttgagtatatacccagtaacaggattggtggatcaaatggtgtttctggttctaaatctttgaggaatcaaaaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188260028 590 - 190850796 ACAGatttaaaaaatttaatttaatGAAaagttccagggtacacgtgcaggtttgttacgtaggtaaacatgtgccatggtggtttgctgcaccaaccgacccatcacctaggtattaagcccagcatgtattagctgtttttcctgatgttctccaccctccatcagcccccttcccccagcccttccctgacaggccccagtgtgtgatgttcccttccccgtatccatgtgttctcgctgctcagctcccacttacaagtgagaacatgtggtgtttggttttctgttcccgctgtagtttgctgaaggtagtggcttccagctccattcttgcctctgcgaaggacatgatctcattcctttttatggctgcgtggttttctgtggtgtacatgtaccacattttgtttatctagcctatcattgattggcatttgggttgattccatgtctttgctgttgtcagtagtgctgcgatgaaca----------catgtgtgcatgtatctttataatacagtgacttatagtccttg-----------agtaatgggattgctgggtcaaatggtatttctggttctaaatctttgaggaatcaccac i calJac3.chr3 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I a score=153885.000000 s hg38.chr4_KI270785v1_alt 73686 69 + 119912 actgtcttccataatggttgaactaatttgcattcccaccaacggtgtaaaagcattcctatttctctg s panTro4.chr4 190341073 69 + 193495092 actgtcttccataatggttgaactaatttgcattcccaccaacagtgtaaaagcgttcctatttctctg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195314996 69 + 198332218 actgtcttccataatggttgaactaatttgcattcccaccaacagtgtaaaagctttcctatttctctg i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181079394 69 + 184069350 gctgtcttccacaatggttgaactaatttacatttccaccaacagtgtaaaagcgttcctctttcttta i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186417611 69 + 189454096 gctgtcttccacaatggttgaactaatttacatttccaccaacagtgtaaaagcgttcctctttcttta i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176033010 69 + 178775436 gctgtcttccacaatggttgaactaatttacatttccaccaacagtgtaaaagcgttcctctTTCTTTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132875481 69 + 135778131 gctatcttccacaatggttgaactaatttacatttccaccaacagtgtaaaagcattcctatttcttta i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188260618 69 - 190850796 acggtcttccacaatggttgaactaatttacattcccactgagagtgtagaagcatggctatttctctg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e nomLeu3.chr7b 111278169 100 + 115148730 M a score=594576.000000 s hg38.chr4_KI270785v1_alt 73755 204 + 119912 taatcttgccagcatctgttgtttcttgactttttaaataatcaccattctgactggcataagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgattttgagctttctttcatatgtttgttagctgcatgtatgtcttctttttagaaatgtctgttca--tgtccttggcccactttttagtggggtt s panTro4.chr4 190341142 204 + 193495092 taatcttgccagcatctgttgtttcttgactttttaaataatcaccattctgactggcataagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgattttgagctttctttcatatgtttgttagctgcatgtgtgtcttctttttagaaatgtctgttca--tgtccttggcccactttttagtggggtt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195315065 204 + 198332218 taatcttgccagcatctgttgtttcttgacttttttaataatcaccattctgactggcgtaagatggtatctcattgtggttttgatttgcatttctctggcgatcagtgattttgagctttctttcatatgtttgttggctgcatgtatgtcttctttttagaaatgtctgttca--tgtccttggcccactttttagtggggtt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111278270 204 + 115148730 taatcttgccagcatctgttgtttcttgacttttttaataatcaccattctgactggcataagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgattttgagctttatttcatatgtttgttggctgcatgtatgtcttctttttagaaatgtctgttca--tgtccttggcctactttttagtgggatt i nomLeu3.chr7b M 100 C 0 s rheMac3.chr5 181079463 200 + 184069350 caatcttgccagcatctgttgtttcttgactttttaaataatcaccattctgaaaggcatgaaatggtatctcattgtggttttgatttgcatttctctgatgatcagtgata--gagcgttctttc--atgtttgttggctgcatgtatgtcttctttttagaagtgtctgttcg--tgtccttggcccactttttagtggggtt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186417680 202 + 189454096 caatcttgccagcatctgttgtttcttgactttttaaataatcaccattctgattggcataagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgatgttgagcgttctttc--atgtttgttggctgcacgtatgtcttctttttagaagtgtctgttcg--tgtccttggcccactttttagtggggtt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176033079 202 + 178775436 CAATCTTGCCAgcttctgttgtttcttgactttttaaataatcaccattctgattggcatgagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgatgttgagcgttctttc--atgtttgttggctgcatgtatgtcttctttttagaagtgtctgttcg--tgtccttgGCCCACgttttagtggggtt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132875550 202 + 135778131 caatcttgccagcatctgttgtttcttgactttttaaataatcaccattctgattggcatgagatggtatctcattgtggttttgatttgcatttctctggtgatcagtgatgttgagcgttctttc--atgtttgttggctgcatgtatgtattctttttagaagtgtctgttcg--tgtccttggcccactttttagtggggtt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188260687 204 - 190850796 caaccttgccagcatctgttttttcttgacctttt-aatcatca-cattctgatcggcgtgagatgatatctcatcgtggttttgatttgcatttctctggtgatcagtgatgttgagcttttcttcatatgtttgttggccacatgcaggtattcttttaagaagtgtctattcatttgtcctttgcccactttttagtgtggct i calJac3.chr3 C 0 I 2 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I a score=699632.000000 s hg38.chr4_KI270785v1_alt 73959 320 + 119912 t----------------------tttttgtttgtttgttt---gtttgttt---------tttgagatggagtcttgctctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaacctccacctcctgggttcaagcaattcttctgccccagcctcctgagtagctgggactacaggtgtgcactaccatgcctggctaatttttgtattttcagtagagacggggtttcgcaatattggccaggctggtctcgaactcctgacctcatgatccgcccacctcagcttcccaaagggctgggattacaggtgtgaaccactgtactcggccacggttgtttg s panTro4.chr4 190341346 328 + 193495092 g----------------------tttttgtttgtttgttt---gtttgttt-gtttgttttttgagatggagtcttgctctgtcacccaggctggagtgcagtggcacaatctcggctcactgcaacctccacctcctgggttcaagcagttcttctgccccagcctcctgagtagctgggactacaggtgtgcaccaccatgcctggctaatttttgtattttcagtagagacggggtttcgcaatattggccaggctggtctcgaactcctgacctcatgatccgcccacctcagcttcccaaagggctgggattacaggtgtgaaccactgcactcggccacagttgtttg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195315269 332 + 198332218 g---------------------ttttttgtttttttgttt-tgttttgttttgttttgtttttgagatggagtctcactctgtcacccaggctggagtgcagtggcacaatctcggctcactgcaacctccacctcctgggttcaagcaattcttctgccccagcctcttgagtagctgggactacaggtgtgcaccaccacgcctggctaatttttgtattttcagtagagatggggtttcgcaatattggccaggctggtctcgaactcctgacctcatgatctgcccacctcagcttcccaaagggctgggattacaggtgtgaaccactgcactcggccacacttgtttg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111278474 328 + 115148730 g---------------------ttttttgttttgttgttg-----ttgttgttgttgttttttgaaatggagtctcgctctgtcacccaggctggagtgcagtggcacgatctcagctcactgcaacctccacctcctgggttcaagcaatttttctgccccagcttcctgagtagctgggactacaggcgttcaccaccacgcctggctaatttttgtattttcagtagagacagggttttgcaatattggccaggctggtctcaaactcctgacctcatgatccacccacctcagcttcccaaagggctgggattacaggtgtgaaccactgcacccggccatggttgtttg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181079663 348 + 184069350 gttttgttgttggtgggtgggtttttttggtttgttgttt----tttgtttgtttgtttttttgagacagaatctcattgtgtcacccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcctgggttcaagcagttcttctgacccagcctcctgagtagctg-gattgcaggcacatgccaccacacctggctaatttttgtatttttaatagacata-gggaaaaaaatattggccaggctggtctcgaactcctgaccttgtgatctgcccacctcgacctcccaaagtgctgggattacaagtgtgagtcaccgcgcctggccatggttgtttc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186417882 354 + 189454096 gttttgttgttggtgggtgggtttttttggtttgttgttttttgtttgtttgtttgtttttttgagacagaatctcattgtgtcacccaggctggagtgcagtggcacaatctcggctcactgcaacctccacctcctgggttcaagcagttcttctgacccagcctcctgagtagctgtgaccacaggtgtgcaccaccacgcctggctaatttttgtgttttcagtagagacgtggtttcacaatattggccaggctggtctcgaactcctgaccttgtgatctgcccacctcgacctcccaaagtgctgggattacaagtgtgagtcaccgcgcctggccatggttgtttc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176033281 353 + 178775436 gttttgttgttggtgggt-ggttttttttgtttgttgttttttttttgtttgtttgtttttttgagacagaatctcgttgtgtcacccaggctggagtgcagtggcacaatctcggctcactgcaacctccacctcctgggttcaagcaattcttctgccccagcctcctgagtagctgtgaccacaggtgtgcaccaccacgcctggctaatttttgtgttttcagtagagacgtggtttcacaatattggccaggctggtctcgaactcctgacctcgtgatctgcccacctcgacctcccaaagtgctgggattacaagtgtgagtcaccgcgcctggccatggttgtttg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132875752 349 + 135778131 gttttgttgttggtgggtgggttttttt-gtttgttgttt----tttgtttgtttgtttgtttgagacagaatctcgttgtgtcacccaggctggagtgcagtggcacaatctcggctcactgcaacctccacctccttggttcaagcaattcttctgcctcagcctcctgagtagctgtgaccacaggtgtgcaccaccacgcctggctaatttttgtattttcagtagagacgtggtttcacaatattggccaggctggtctcgaactcctgacctcgtgatctgcccacctcgacctcccaaagtgctgggattacaagtgtgagtcaccgcgcctggccatggttgtttg i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e calJac3.chr3 188260891 2 - 190850796 I a score=3594182.000000 s hg38.chr4_KI270785v1_alt 74279 1299 + 119912 tttctttcttgtagatttgctttaattccttgtagattctggacattagacctttgtcagatggataggctgcagtaattttctcaca-ttctgtaggttgtctgttcaatctgatgatagcttcttttgctgtgcagaagctctttagtttaattagatttcatttgtcaatttttgcttttgttgcaattgcttttggtgatttcatcataaaatccttgcctatgcttatgtcctgaatggtattgcctagattttcttctagggtttttacagttttgggt-----------------------------------------------------------------------tttacatttcagtctttaatccatcttgagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatggctagccagttctcccagcaccatttattaaatagggaatcctttctccattgcttgtttttgttagacttgttgaagatcagctggttgtagatgtgtggtttcatttctgagttctttgtcctgttccattggtctatgtgcctgtttttgtaccagtacaatgctgtttttcttactatagccagaggtacaaggagaagttggtaccatttcttctgaaactattccaaacaattgaaaatgagggactcctcgctaactcattttaagaggcaagcatcatactcataccaaaacctggcagagatacaacaacaacaaaagtttcaggccaatatctctgatgaacatcgatgcaaaaatcctcaataaaatactggcaaacagaatccagcagcacatcaaaaagcttatccaccacaatcaagtcggcttcatccccaggatgcaaatctggtccaacatacacaaatcaataagtgtaattcatcacataaacaga---------actaaagacaaaaaacacataattatctcaatagatggagaaaaggccttcaataaaattcaacatccctttatattaaaaactctcaataaactaggtattaaaggatcatatctcaaaataataagagccatttatgagaaacccacagccaatactaatatcatactgaatggacaaatgct--ggaagcattcccctggaaaactggcacaagacaaggatgccctctctcaccattcttattcaacatagtattggaagctctggccggggcaatcaggcaagagaaagaaatagagggtatgcaaagaggaagagaggaagtcaaactgtctttgtttgaagatgacatgatcctatacctagaaaactcctatcatctcaggccaaaagcttcttaagctgataagcaacttcagcaaag s panTro4.chr4 190341674 1289 + 193495092 tttctttcttgtagatttgctttaattccttgtagattctggacattagacctttgtcagatggataggctgcagtaattttctcacg-ttctgtaggttgtctgttcagtctgatgatagcttcttttgctgtgcagaaact---------aattagatttcatttgtcaatttttgcttttgttgcaattgcttttggtgatttcatcataaaatccttgcctatgcctatgtcctgaatggtattgcctagattttcttctagggtttttatagttttgggt-----------------------------------------------------------------------tttacatttcagtctttaatccatcttgagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatggctagccagttctcccagcaccatttattaaatagggaatcctttctccattgcttgtttttgttagacttgttgaagatcagctggttgtagatgtgtggtttcatttctgagttctttgtcctgttccattggtctatgtgcctgtttttgtaccaatacaatgctgtttttcttactatagcGagaggtacaaggagaagttggtaccatttct-ctgaaactattccaaacaattgaaaatgagggactcctcgctaactcattttaagaggcaagcatcatactcataccaaaacctggcagagatacaacaacaacaaaagtttcaggccagtatctctgatgaacatcgatgcaaaaatcctcaatgaaatactggcaaacagaatccagcagcacatcaaaaagcttatccaccacaatcaagtcggcttcatccccaggatgcaagtctggtccaacatacacaaatcaataagtgtaattcatcacataaacaga---------actaaagacaaaaaacacataattatctcaatagatggagaaaaggccttcaataaaattcaacatccctttatattaaaaactctcaataaactaggtattaaaggatcatgcctcaaaataataagagccatttatgagaaacccacagccaatactaatatcatactgaatggacaaatgct--ggaagcattcccctggaaaactggcacaagacaaggatgccctctctcaccattcttattcaacatagtgttggaagctctggccggggcaatcaggcaagagaaagaaatagagggtatgcaaagaggaagagaggaagtcaaactgcctttgtttgaagatgacatgatcctgtatctagaaaactcctattgtctcgggccaaaagcttcttaagctgataagcaacttcagcaaag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195315601 1298 + 198332218 tttctttcttgtagatttgctttaattccttgtagaatctggacattagacctttgtcagatggataggctgcggtaattttctcaca-ttctgtaggttgtctgttcaatctgatgatagtttcttttgctgtgcagaagctctttagtttaattagatttcatttgtcaatttttgctttttttgcaattgcttttggtgatttcatcataaaatccttgcctatgcttatgtcctgaatggtattgcctagatttttttctagggtttttatagttttaggt-----------------------------------------------------------------------tttacatttcagtctttaatccatcttgagttaattttttgtgaaaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatgactagccagttctcccagcaccatttattaaatagggaatcctttctccattgcttgtttttgttagatgtgttgaagatcagctggttgtagatgtgtggtttcatttctgagttctttgtcctgttccattggtctatgtgcctgtttttgtaccagtacaatgctgtttttcttactatagccaaaggtacaaagagaagttggtaccatttcttctgaaactattccaaacaattgaaaatgagggactccttcctaactcattttaagaggcaagcatcatactcataccaaaacctggcagagatacaacaacaggaaaaatttcaggccaatatctctgatgaacatcgatgcaaaagtcctcaataaaatactggcaaacctaatccagcagcacatcaaaaagcttatccagcacaatcaagtcggcttcatccccaggatgcaagtctggtccaacatacgcaaatcaataagtgtaattcatcacataaacaga---------actaaagacaaaaaacacataattatctcaatagatggagaaaaggccttcaataaaattcaacatccctttatattaaaaactctcaataaactaggtattaaaggatcatacctcaaaataataagagctatttataagaaacccacagccaatactaatatcatactgaatggacaaatgct--ggaagcattcccctcgaaaactggcacaagacaaggatgccctctctcaccattcttattcaacatagtattggaagctctggccagggcaatcaggcaagagaaagaaatagagggtatgcaaagaggaagagaggaagtccaacggtctttgttt-aagatgacatgatcctatatctagaaaacccctattgtctcaggtaaaaagcttcttaagctgataagcaacttcagcaaag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111278802 1300 + 115148730 tttctttcttgtagatttgctttaattccttgtagattctggacattagacctttgtcagatggataggctgcagtaattttctcatatttctgtaggttgtctgttcaatctgatgatagtttcttttgttgtgcagaagctctttagtttaattagatttcatttgtcaatttttgcttttgttgcaattgcttttggtgatttcatcataaaatccttgcttatgcttgtgtcctaaatggtattgcctagattttcttctagggtttttatagttttgggt-----------------------------------------------------------------------tttacatttcagtcgttaatccttcttgagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatggctagccagttctcccagcaccatttattaaatagggaatcctttctccattgcttgtttttgttagacttgttgaagatcagctggttgtagatgtgtggtttcatttcggagttctttgtcctgttccattggtctatgtgctggtttttgtaccagtacaatgccgtttttcttactatagccagaggtacaaagagaagttgataccatttcttctgaaactattccaaacaattgcaaatgagggactcctccctaactcattttaagaggcgagcatcatactcataccaaaacctggcagagatacaacaacaacaaaaatttcaggccaatatctctgatgaacatcgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagcttatccaccacaatcaagtcggcttcatccccaggatgcaagtctggtccaacatgcacaaatcaataagtgtaattcatcacataaacaga---------actaaagacaaaaaacacataattatctcaatagatggagaaaaggccttcaataaaattgaacatccttttatattaaaaactctcaataaactaggtattaaaggatcttacctcaaaataataagagccatttatgagaaacccacagccaatactaatatcatactgaatggacaaatgct--ggaagcattcccctcgaaaactggcacaagaccaggatgccctctctcaccattcttattcaacatagtattggaagctctggccagggcaatcaggtaagagaaagaaatagagggtatgcaaagaggaagagaggaagtcaaagtatctttgtttgaagatgacatgatcccatatctagaaaacccctatcatctcaggccaaaagcttcttaaactgttaagcaacttcagcaaag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181080011 1312 + 184069350 tttctttcttgtagatttacttaaattcgttgtagattctggacattagacctttgtcagatggataggctgcaataattttctcaca-ttctgtaggttgtctgttcactctgatgatattttcttttgctgtgcagaagctctttagtttagttagatttcatttgtcaattttcacttctgtcgcaattgcttttggtgatttcataataaaatccttgtccatgcttatgtcctgaatggtattgcct------------------------------agcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn------------------------------------------------------------nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn-------------------------------nnngttctcccagcaccatttattaaatagggaatcctttctccattgctcgtttgttttagatttattgaagatcagctggttgtagatgtgtggcttcatttctgagttatttgttctgttccattggtctacgtgcctgtttttgtgccagtaccatgctgtttttcttactgtcgccagaggtacaaagagaagttgataccatttcttctgaaagcattccaagcaattgaaaagaagggactcctccctagctcattttatgaggcaagcatcatcctcataccaaaacctgacagagatacaacaacat---aaatttcaggccaatatccccgatgaacatcgatgcaaaaatcctc-aaaaaatactggcaaaccaaatccagcagtatatcaaaaagcttatccac-----tcgagtcggcttcatccccagtacccaaggctggtccaacatatgcaaatcaacaggtgtaattcatcacataaacagacgattatctgtttaagacaaaaaacacacgattatctcaatagatggagaaaaggccttcgataaaattcaacatccctttgtattaaaaactctcaataaactaggtattaaaggaacatacctcaaaataataagagtcatttatgagaaacccacagccaatacgaatatcatatggaatggacaaatgctggggaagcattcccctcgaaaactggcacaagacaaggatgccgtctctcaccattcttattcaacatagtattagaagctctggccagagcaatcagtcaggagaaagaaatagaaggtacgcaaagaggaagagaggaagtcaaattgtcttagcttgaagatgacatgatcccatacctagaaaatccccactgactcaggccaaaagcttcttaagctgataagcaacttcagcaaag i rheMac3.chr5 C 0 I 732 s macFas5.chr5 186418236 1306 + 189454096 tttctttcttgtagatttacttaaattcgttgtagattctggacattagacctttgtcagatggataggctgcaataattttctcaca-ttctgtaggttgtctgttcactctgatgatattttcttttgctgtgcagaagctctttagtttagttagatttcatttgtcaattttcacttctgtcgcaattgcttttggtgatttcataataaaatccttgtccatgcttatgtcctgaatggtattgcctagattttcttctaggatttttatagttttgagt-----------------------------------------------------------------------tttacatttcagtctttaatccctctagagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatggctagccagttctcccagcaccatttattaaatagggaatcctttctccattgctcgtttgttttagatttattgaagatcagctggttgtagatgtgtggcttcatttctgagttatttgttctgttccattggtctacgtgcctgtttttgtgccagtaccatgctgtttttcttactgtcgccagaggtacaaagagaagttgataccatttcttctgaaaggattccaaacaattgaaaagaagggactcctccctagctcattttatgaggcaagcatcatcctcataccaaaacctgacagagatacaacaacat---aaatttcaggccaatatccccgatgaacatcgatgcaaaaatcctc-aaaaaatactgggaaatcgaatccagcagcacattaaaaagcttatccaccacaatcgagtcggcttcatccccagtacgcaaggctggtccaacatatgcaaatcaacaggtgtaattcatcacataaacagacgattatctgtttaagacaaaaaacacacgattatctcaatagatggagaaaaggccttcgataaaattcaacatccctttgtattaaaaactctcaataaactaggtattaaaggaacatacctcaaaataataagagtcatttatgagaaacccacagccaatacgaatatcatatggaatggacaaatgctggggaagcattcccctcgaaaactggcacaagacaaggatgccgtctctcaccattcttattcaacatagtattagaagctctggccagagcaatcagtcaggagaaagaaatagaaggtacgcaaagaggaagagaggaagtcaaattgtcttagcttgaagatgacatgatcccatacctagaaaatccccactgactcaggccaaaagcttcttaagctgataagcaacttcagcaaag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176033634 1306 + 178775436 tttctttcttgtagaTTTACTTAAattcgttgtagattctggacattagacctttgtcagatggataggcTGCaataattttctcaca-ttctgtaggttgactgttcactctgatgatattttcttttgctgtgcagaagctctttagtttagttggatttcatttgtcaatttttgcttttgtcgcaattgcttttggtgatttcataataaaatccttgcccatgctgatgtcctgaatggtattgcctagattttcttctagggtttttatagttttgagt-----------------------------------------------------------------------tttacatttcagtctttaatccctctagagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcagatggctagccagttctcccagcaccatttattaaatagggaattctttctccattgctcGTTTGTTTTAGATTTATTGAAGATCAgctggttgtagatgtgtgggttcatttctgagttatttgttcttttccattggtctacgtgcctgttttggtgccagtacaatgctgtttttcTTACTGttgccagaggtacaaagagaagttgataccatttcttctgaaaggattccaaacaattgaaaagaagggactcctccctagctcattttatgaggcaagcatcatcctcataccaaaacctgacagagatacaacaacat---aaatttcaggccaatatccccaatgaacatcgatgcaaaatcctca-gaaaaatactggcaaatcgaatccagcagcacattaaaaagcttatccaccacaatcgaGTCGGCTTCATCCCCAGTATGCAAGGCTggtccaacatatgcaaatcaacaagtgtaattcatcacataaacagacgATTATCTGTTTAAGACAAAAaacacacgattatctcaatagatggagaaaaggccttcaataaaattcaacatccctttgtattaaaaactctcaataaactaggtattaaaggaacatacctcaaaataataagagtcatttatgagaaacccacagccaatacgAATATCATATGGAATGGACAAATGCTGGGGAAGCATTCCCCtcgaaaactggcacaagacaaggatgccgtcTCTCACCATTCTTATTTGACATAGTATTAGAAgctctggccagagcaatcagtcaggagaaagaaatagagggtacgcagagaggaagagaggaagtcaaattgtctttgtttgaagatgacatgatccCATACCTAGAAAATCCCCACTGACTCAggccaaaagcttcttaagctgataagcaacttcagcaaag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132876101 1304 + 135778131 tttctttcctgtaggtttacttaaattcgttgtagattctggacattagacctttgtcagatggataggctgcaataattttctcaca-ttctgtaggttgtctgttcactctgatgatattttcttttgctgtccagaagctctttagtttagttagatttcatttgtcaatgtttgcttttgtcgcaattgcttttggtgatttcataataaaatccttgcccatgcttatgtcctgaatggtattgcctagattttcttctagggtttttatagttttgagt-----------------------------------------------------------------------tttacatttcagtctttaatccctctagagttaattttttgtataaggtgtaaggaagga-------------------------------------------------------------gtctagtttcaattttctgcatatggctggccagttctcccagcaccatttattaaatagggaatcctttctccattgctcgtttttgttggatttattgaagatcagctggttgtagatgtgtggtttcatttctgagttgtttgttctgttccattggtctatgtgcctgtttt-gtgccagtaccatgctgtttttcttactgtcgccagaggtacaaagagaagttgataccatttcttctgaaaggattccaaacaattgaaaagaagggactcctccctagctcattttatgaggcaagcgtcatcctcataccaaaacctgacagagatacaacaacat---aaatttcaggccaatatccccgatgaacatcgatgcaaaaatcctcaaaaaaatactggcaaatcgaatccagcagcacattaaaaagcttatccaccacaatcgagtcggcttcatccccagtatgcaaggctggtccaacatatgcaaatcaacaagtgtaattcatcacataaacagacgattatctgtttaagacaaaaaacacacgattatctcaatagatggagaaaaagccttcaataaaattcaacatccctttgtattaaaaactctcaataaactaggtattgaaggaacatacctcaaaataataagagtcatttatgagaaacccacagccaatacgcatatcatacggaatggacaaacgct--ggaagcattcccctcaaaaactggcacaagatgaggatgccgtctctcaccattcttattcaacatagtattagaagctctggccagagcaatcagtcaggagaaagaaatagagggtacgcaaagaggaagagaggaagtcaaattgtctttgtttgaagatgacatgatcctatacctagaaaatccccactgactcaggccaaaagcttcttaagctgataagcaacttcagcaaag i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188260893 1273 - 190850796 ttttttccttgcagatttgcttaagttccttgtagattctggatattagagcttcgtcagattgacagactgcaaaacttttctccca-ttctgtaggttgtctgtttgctctgatgatagcttcttttgctgtgcagaagctcgttagtttaattagatttcatttgtcaatttttgctctttttgcaattgcttttggtgatttcatcataaaatccttgcccatgcttatgtcctgaacggtatcacctagattttcttctagggtttttatagttttgggt-----------------------------------------------------------------------tttatgtttaagtctttaatccatcttgagttaattttttgtataagggagaaggagggg------------------------------------------------------------ggtctagtttccattttctgcatatgtctcgtgagttctcccggcaccatttattaaatagggaatcctttctccattgcttgtttttgtcagatttgttgaagatcagatgattatagatgtgtggctttatttttgagttctttgttctgttctattggtctgtgtgcctgtttttgtaccagtatcatgctgtttttcttattgtagccagaggaacaaagaggagttggtaccatttcttctgaaactattccgaacaattgaaaaggagggactccttcctaactca-cttacgaggccagcatcatact-ataccaaaacctggcagtggtacaacaacacca-aaaattcaggccactatccctgatgaagactgatgcaaaaatcctcaatgaaacactggcaaaccgcgtccagcagcacatcaaaaggcttacccaccacaatcaagttggcttca-ccccaggatgcaagactagtccaacatacgcaaatcaataaatgtaattcatcacataaaaaga---------actaaagac-aaaagcacatgattatttcaatagatgcagaaacggccttctataaaattcaacatcccttcatgttaaaacctctcaataaaccaggtattaaaggaacatacctcaaaataatagcag---tttatgacaaacccacagccaatgccagaatcatactgaagggacaagagct--ggaagcgttcccctttaaaactggcaaaagacaaggatgccctctctcatcattcttactcaacatggtagtggaagttctggccagggaaatcaggcaagagaaagaaatagagggtattccaataggaagagaggaagtcaaattgtctttg----aagattacatgatcc---------------cccattgactcaccccaaaagcttcttaagttgataaacaagctcagcaaag i calJac3.chr3 I 2 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I a score=954050.000000 s hg38.chr4_KI270785v1_alt 75578 416 + 119912 gctcaggatacaaaatcaatgtgcagaaatcgcaag----ccttcctatacactgacaacagacaagcagagagccaaatcatgaatgaactcccattcacaattgccacaaagagaataaaatacctaggaatacagctaacaagggaagtgaaggacctcttcaaggagaacca-----cgctgctcatggaaatcagagaggacgcaagcagatgggaaaacattccatgctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattcaatgctattctcattaaactaccattgacattcttcacaggagtagaaaaaactgtttggaaattcttatggaaccaaaaaagagctcgcataacaagggcaatcctaagcaaaaagaacgaagctgg s panTro4.chr4 190342963 416 + 193495092 gctcaggatacaaaatcaatgtgcagaaatcacaag----ccttcctatacgctgacaacagacaagcagagagccaaatcatgaatgaactcccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaagggaagtgaaggacctcttcaaggagaacca-----cgctgctcatggaaatcagagaggacgcaagcagatggaaaaacattccattctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattcaatgctattctcgttaaactaccattgacattcttcacaggagtagaaaaaactctttggaaattcttatggaaccaaaaaagagctcgcataacaaggagaatcctaagcaaaaagaacaaagctgg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195316899 416 + 198332218 gctcagcatacaaaatcaatgtgcagaaatcacaag----cattcctatacactgacaacaggcaagcagagagccaaatcatgaatgaacttccattcacaattgctacaaagagaataaaatacctaggaatacagctaacaagggaagtgaaggacctcttcaaggagaacta-----cactgctcatggaaatcagagaggacacaagcagatggaaaaacattccattctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattcaatgctattctcattaaactaccattgacattcttcacaggagtagaaaaaactgtttgaaaattcttatggaaccgaaaaagagctcacataacaaggacaatcctaagcaaaaagaacaaagctgg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111280102 415 + 115148730 gctcaggatacaaaatcaatgtgcagaaatcacaag----cattcctatacactgacaacagacaagcagagagccaaatcatgaatgaaattccattcacaattgctacaaagagaatacaatacctaggaatacagctaacaagggaagtgaaggacctcttcaaggagaacta-----cactgctcatggaaatcagagaggacacaagcagatggaaaaacattccattctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattcaatgctattctcattaaactaccattgacattgttcacaggagtag-aaaaactgtttgaaaattcttatggaaccaaaaaagagctcgcataacaaggacaatcctaagcaaaaagaacaaagctgg i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186419542 414 + 189454096 gctcaggatacaaaatcaatgtgcagaaatcacaag----cattcctaaacactaacaacagacaagcagagagccaaatcatgaatgaacttcccttcacaattgctacaaagagaataaaatacctaggaatacaactaacaagggaagtgaaggacctcttcaaggagaacta-----cactgctcatggaaatcagagaggacacaagcagatggaaaaacattccattctcatggatagaaagaatcaatattgtgaaaatggctatatggcccaaagtaatttatagattcaatgctgttctcattaaacta-cattgatattcttcacaggagtagaaaaaactattttagaattcttacagaacc-caaaagagctcacgtaacaaggacaatcctaagcaaaaagaacagaactgg i macFas5.chr5 C 0 I 302 s papAnu2.chr5 176034940 422 + 178775436 gctcaggatacaaaatcaatgtgcagaaatcacaagcattcattcCTAAACActaacaacagacaagcagagagccaaatcatgaatgaacgtccactcacaattgcta-aaagagaataaaatacctaggaatacaactaacaagggaagtgaaggacctcttcaaggagaactaaaaaccactgctcatggaaatcagagaggacagaagcagatggaaaaacattccatcctcatggataggaagaatcaatattgtgaaaatggctgtacggcccaaagtaatttatagattcaatgctgttctcATTAAACTa-cattgatattcttcacaggagtagaaaaaactattttagaattCTTACGGAACC-CAAAAGAGCTCGCGTAACaaggacaatcctaagcaaaaagaacaaagctgg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132877405 414 + 135778131 gctcaggatacaaaatcagtgtgcagaaatcacaag----cattcctaaacactaacaacagacaagcagagagccaaatcatgaatgaacttccattcacaattgctacacagagaataaaatacctaggaatacaactaacaagggaagtgaaggacctcttcaaggagaacta-----cactgctcatggaaatcagagaggacacaagcagatggaaaaacattccattctcatggatagaaagaatcagtattgtgaaaatggctattcggcccaaagtaatttatagattcagtgctattctcattaaacta-cattgatattcttcacaggagtagaaaaaactattttagaattcctatggaacc-aaaaagagctcgcataacaaggacaatcctaagcaaaaagaacaaagctgg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188262166 420 - 190850796 gctcaggatacaaaatcaatgtggagaaatcacaag----cattcctatacactgacaagagacaagcagacagccaaatcatgagtgaactcccattcacaattgctacaaagagaattaattacgtaggaatacagctaacaagggaaatgaaggacctcttcaaggagaactacgaaccactgcccaaggaaatcagagaggacacaaacaaacggaaaaacattccatgctcatggataggaagaatcaatattgtgaaaatggccatactgcccaaagtaatttatagattcaatgctgtttccattaaattaccatttacgtttttcacagaaatagaaaaaactattttaaaattcatatggaaccaaaaatgagctcatatagccaggacaatcctaagcaaaaa-aacaaagctgg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e rheMac3.chr5 181081323 732 + 184069350 I a score=9427.000000 s hg38.chr4_KI270785v1_alt 75994 58 + 119912 atatgtcatagtacccagcttcaaactaAGACAGATTATGTCATACTACCCAGCTTCA s panTro4.chr4 190343379 37 + 193495092 atatgtcatagtacccagcttcaaactaAGACGGATT--------------------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195317315 37 + 198332218 atatgtcatactacccaacttcaaactaAGACAGATT--------------------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111280517 37 + 115148730 atatgtcatactacccaacttcaaactaAGACAGATT--------------------- i nomLeu3.chr7b C 0 C 0 s papAnu2.chr5 176035362 9 + 178775436 atatgtcat------------------------------------------------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132877819 10 + 135778131 atacgtcata------------------------------------------------ i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188262586 10 - 190850796 agatgtcatg------------------------------------------------ i calJac3.chr3 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e macFas5.chr5 186419956 302 + 189454096 I e rheMac3.chr5 181081323 732 + 184069350 I a score=678.000000 s hg38.chr4_KI270785v1_alt 76052 13 + 119912 AACTAAGACGGAT s macFas5.chr5 186420258 13 + 189454096 aacaaagctggat i macFas5.chr5 I 302 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e calJac3.chr3 188262596 0 - 190850796 C e chlSab2.chr7 132877829 0 + 135778131 C e papAnu2.chr5 176035371 0 + 178775436 C e rheMac3.chr5 181081323 732 + 184069350 I e nomLeu3.chr7b 111280554 0 + 115148730 C e ponAbe2.chr4 195317352 0 + 198332218 C e panTro4.chr4 190343416 0 + 193495092 C a score=21975.000000 s hg38.chr4_KI270785v1_alt 76065 29 + 119912 TATGTCATACTACCCAACTTCAAACT----AAG s rheMac3.chr5 181082055 29 + 184069350 tatgtcatactacccaacttcaaatt----CAG i rheMac3.chr5 I 732 C 0 s macFas5.chr5 186420271 28 + 189454096 -atgtcatactacccaacttcaaatt----CAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176035371 21 + 178775436 --------actacccaacttcaaatt----caG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132877829 20 + 135778131 ---------ctacccaacttcaaatt----CAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188262596 24 - 190850796 ---------ctacccaacttcaaactaATACAG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15746340 0 - 59632846 C e mm10.chr8 84739667 1633 - 129401213 I e nomLeu3.chr7b 111280554 0 + 115148730 C e ponAbe2.chr4 195317352 0 + 198332218 C e panTro4.chr4 190343416 0 + 193495092 C a score=870775.000000 s hg38.chr4_KI270785v1_alt 76094 293 + 119912 ----ACAGATTTGCAGCTTGAAATGTTTACAACCTAATGCTGCCAATCCTTAATGTCTTAAATACAATGAATTTTTGTAGTGCTTTTCGAGTTCACAATTCG-AAATGATATAAAACTGGATTACAGACAATTACATTTCCCATATTATTTAAAATATGCACTGGTGCTACAAAATTTTTCTATAATGATCA---Ttatatata-------tgtaatattatat-------aagtg-------------------------tgaaagtataatattatgtatgtcatatataatatataACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT s panTro4.chr4 190343416 286 + 193495092 -----------TGCAGCTTGAAATATTTACAACCTAATGCTGCCCATATTTAATGTCTCAAATACAATGAATTTTTGTAGTGCTTTTCGAGTTCACAATTCA-AAATGATATAAAACTGGATTACAGACAATTACATTTCCCATATTATTTAAAATATGCACTGGTGCTACAAAATTTTTCTATAATGATCA---TTATATATA-------TGTAATATTATAT-------AAGTG-------------------------TGAAAGTATAATATTATGTATGTCATATATAATATATAACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195317352 286 + 198332218 -----------TGCAGGTTGAAATATTTACAACCTAATGCTGCCTATCCTTAACGTCTTAAGTACAATGAATTTTTGTAGTGCTTTTCGAGTTCACAATTCA-AAATGATATAAAACTGGATTACAGACAATTACATTTCCCATATTATTTAAAATATGCACTGATGCTACAAAATTTTTCTATAATGATCA---TTATATATA-------TGTAATATTATAT-------AAGTG-------------------------TGAAAGTATAATATTATGTATGTCATATATAATATATAACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111280554 286 + 115148730 -----------TGCAGGTTGAAATGTTTACAACCTAATGCTGCCCATCCTTAACCTCTTAAGTACAATGAATTTTTGTAGTGCTTTTCGAGTTCACAATTCA-AAATGATATAAAACCGGATTACAGACAATTACATGTCCCATATTATTTAAAATATGCACTGGTGCTACAAAATTTTTCTATAATGATCA---Ttatatata-------tgtaatattatat-------aagtg-------------------------tgaaagtataatattatatatgtcatatataatataGAACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181082084 285 + 184069350 ----ATT----TGCAGGTTGAAGTGTTTACAACCTTATGCTGCCCATCCTTAACCTCT-AAGTACAACGAATTTTTGTAGTGCTTTTCAAACTCACAATTCA-AAATAATATAAAACTGGATTATAGTCAATTATATTTCCCA---TATTTAAAATATGCACTGGTGCTACAAAATTTTTCTATAATGATCA---TTGTATATA-------TGTAATATTATAT-------AAGCG-------------------------TGAAAGTATAATATTATATATGTCATATATAATATATAACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186420299 285 + 189454096 ----ATT----TGCAGGTTGAAGTATTTACAACCTTATGCTGCCCATCCTTAACCTCT-AAGTACAACGAATTTTTGTAGTGCTTTTCAAACTCACAATTCA-AAATAATATAAAACTGGATTACAGACAATTATATTTCCCA---TATTTAAAATATGCACTGGTGCTACAAAATTTTTCTATAATGATCA---TTGtatata-------tgtaatattatat-------aagcg-------------------------tgaaagtataatattatatatgtcatatataatatataACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176035392 285 + 178775436 ----ATT----TGCAGGCTGAAGTGTTTACAACCTTATGCTGCCCATCCTTAACCTCT-AAGTACAACGAATTTTTGTAGTGCTTTTCAAACTCacaattca-aaataatataaaactggATTACAGACAATTATATTTccca---tatttaaaatatgcactGGTGCTACAAAATTTTTCtataatgatca---ttgtatata-------tgtaatattatat-------aagtg-------------------------tgaaagtataatattatatatgtcatatataatatataaccaTA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132877849 285 + 135778131 ----ATT----TGCAGGTTGAAATGTTTACAACCTTACGCTGCCCATCCTTAACCTCT-AAGTACAATGAATTTTTGTAGTGCTTTTCAAATTCACAATTCA-AAATGATATAAAACTGGATTACAGACAATTATATTTCCCA---TATTTAAAATATGCTCTGGTGCTACAAAATTTTTCTATAATGATCA---Ttatatata-------tgtaatattatat-------aagcg-------------------------tgaaagtataatattatatgtgtcatatataatatataACCATA---------------------------AAAGTAGATTTTACATTTATGATTAGCTAAAAAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188262620 269 - 190850796 ----ATT----TGCAGGCTGAAATGTTTACACCCTAATGCGACCCCTCCTTAACCTCT-AAGTGGAATGAGTTTTTGTAGTGCTTTTCAAGTTTGCAATTTA-AAATGATATAAAACTGGATTATAGAAAATTACATTTCCCA---TA-TTAAAATATGCACCGGTGCTACAAAATTTTGCTATAATGATCA---TTATATACA-------TGTGATATTATAT-------AACTG-------------------------TAAA-----AATATTATATATGTCATATAT--TATTTAACCATA---------------------------AAAGTAGATTTTACATTTGTTATTAGC-------- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15746340 361 - 59632846 ACAGATT----TACAGCTTGAAATGTTGACAATCTAATATTTCCT-CCCTTAATCTAT-AGATATAATGGGTTTTTGTAGCACTCTTCTAGTTCACAACTCAGAAATGGTTTAAAACTGGATTACAGACCATTAAATTTCCTGTATTGTTTTAGATGTGCATTGGTGATACAAATTTTACCTGTAATGGCCACACTTCTAACTATGGCTTGTGTAGTAATTTATCAATTACAGGTGTTTGCTGGAGTTAGAATGAGATTTCTGAGATTAGAAAATCTTTTGTAGCTCAAACAGTATATCATTATGGGCTCATTAATAAGTTGTATTAGAAACGAAGGATGTTTCACAGTGATGATTAGCTAATGACA i canFam3.chr16 C 0 C 0 e mm10.chr8 84739667 1633 - 129401213 I a score=1767679.000000 s hg38.chr4_KI270785v1_alt 76387 502 + 119912 TTTGAGACAGAAACTCTGCGTTTTGCATATTATGTATTCTCTTGTCTTTCCTAATCCCTAGTAAAAAATAAAC------------------TTTACTATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTGTATTTTC-AGTTAGTTTTTTAAAAAAA---TGTTTTTTT-----TCTGT-----------AGCAAATTGTTGACTTGGATATTGCTTATTTTGAGGTTCTTCCTCTTTCCCCT---CCTGTGCCCTCCAAT------T--CAGTGTAACTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCCTTTTTACCCTTGACTTTCATCACTAGTATTGATTGATGGTATGTTATTTACCTGGCATTGAAGGACTACTGGTTTATAACATTCAAGGCAAAACATTTTAAGTAGTATGCAATGCGGAGATTTCTTTCTACTGGGCAAGGTTAATGACCTACCAAAAGAGGAGGGGTCGGTGTATGCTGGGAATAATTGAT s panTro4.chr4 190343702 499 + 193495092 TTTGAGACGGAAACTCTGCGTTTTGCATATTATGTATTCTCTTGTCTTTCCTAATCCCTAGTAAAAA-TAAAC------------------TTTACTATGTAAAA-TCTGTTAATTTGAAGTCAAAGCATGGCTGTATTTTC-AGTTAGTTTTTTAAAAAAA---TGTTTTTTT------CTGT-----------AGCAAATTGTTGATTTGGATATTGCTTATTTTGAGGTTCTTCCTCTTTCCCCT---CCCGTGCCCTCCAAT------T--CAGTGTAGCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGAGGGTTGTTCAGCTTCTTTGAAATG--CAACATGTTTTAGTGCCTTTTTACCCTTGACTTTCATCACTAGTATTGATTGATGGTATGTTATTTACCTGGCATTGAAGGACTACTGGTTTATAACATTCAAGGCAAAACATTTTAAGTAGTATGCAATGCGGAGATTTCTTTCTACTGGGCAAGGTTAATGACCTACCAAAAGAGGAGGGGTCGGTGTATGCTGGGAATAATTGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195317638 519 + 198332218 TTTGAGACGGAAACTCTGCGTTTTGCATATTATGTATTCTCTTGTCTTTCCGAATCCCTAGTAAAAAATAAACTTTACTAAAAAATAAATTTTTACTATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTGTATTTTCTAGTTAGTTTTTTTAAAAAA---TGTTTTTT-------CTGT-----------AGCAAATTGTTGATTTGGATATTGCTTATTTTGAGGTTCTTCCTCTTTCCCCT---CCCGTGCCCTCCAAT------T--CAGTGTAGCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCGTTTTTACACTTTACTTTCATCACTAGTATTGATTGATGGTATGTTATTTACCTGGCATTGAAGGACTACTGGTTTATAACATTCAAGGCAAAACATTTTAAGTAATATGCAATGCGGAGATTTCTTTCTACTGGGCAAGGTTAATAACCTACCAAAAGAGGAGGGGTCGGTGTATGCTGGGAACAATTGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111280840 500 + 115148730 TTTGAGACGGAAACTCTGCGTTTTGCATATTATATATTCTCTTGTCTTTCCTAATCCCTAGTAAAAAATAAAC------------------TTTACTATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTGTATTTTCTAGTTAG--TTTAAAAAAAA---TGTTTTTTT------CTGT-----------AGCAAATTGTTGATTTGGATATTGCTTATTTTGAGGTTCTTCCTCTCTCCCCT---CCTGTGCCCTCCAAT------T--CAGTGTAGCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCATTTTTACACTTGACTTTCATCACTAGTATTGATTGATGGTATGTTATTTACCTGGCATTGAAGGACTGCTGGTTTATAACATTCAAGGCAAAACATTTTAAGTAGTATACAATGCGGAGATTTCTTTCTACTGGGCAAGGTTAATGACCTACCAAAACAGGAGGGGTCGGTGTATGCTGGGAATAATTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181082369 503 + 184069350 TTTGAGACGGAAACTCTGCCTTTTGCGTATTATGCATTCTCTTGTCTTTCCTAATCCCTAGTAAAAAATAAGC------------------TTTACCATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTATATATTCTAGTTAG--TTAAAAAAACATTTTTTTTTTTT------CTGT-----------AGCAACTTGTTGGTTTGAATATTGCCTACTTTGAGGTTCTTCCTCTTTCCCCT---CCCCTGCCCTCCAAT------T--CAGTGTACCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCCTTTTTACACTTGACTTTCATCACTAGTGTTGATTGATGGTACGTTATTTACCTGGCGTTGAAGGACTACTAGTTTATAACATTCAAGGCAAAACATTCTAAGTAGTGTGCAATGGGGAGATTTCTTTCTGCTGGGGAAGGTTAATGACCTACCAAAGGAGGAGGGGTCAGTGGATGCTGGGAATAATGAAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186420584 500 + 189454096 TTTGAGACGGAAACTCTGCCTTTTGCGTATTATGCATTCTCTTGTCTTTCCTAATCCCTAGTAAAAAATAAGC------------------TTTACCATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTATATATTCTAGTTAG--TTAAAAAAACA---TTTTTTTTT------CTGT-----------AGCAACTTGTTGGTTTGGATATTGCCTACTTTGAGGTTCTTCCTCTTTCCCCT---CCCCTGCCCTCCAAT------T--CAGTGTATCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCCTTTTTACACTTGACTTTCATCACTAGTGTTGATTGATGGTACGTTATTTACCTGGCGTTGAAGGACTACTAGTTTATAACATTCAAGGCAAAACATTCTAAGTAGTGTGCAATGGGGAGATTTCTTTCTGCTGGGGAAGGTTAATGACCTACCAAAGGAGGAGGGGTCAGTGGATGCTGGGAATAATTAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176035677 499 + 178775436 TTTGAGACGGAAACTCTGCCTTTTGCGTATTATGCATTCTCTTGTCTTT-CTAATCCCTAGTAAAAAATAAGC------------------TTTACCATGTAAAAATCTGTTAATTTGAAGTCAAAGCATGGCTATATATTCTAGTTag--ttaaaaaaaca---ttttttttt------ctgt-----------agcaacTTGTTGGTTTGGATATTGCCTACTTTGAggttcttcctctttcccct---cccctgccctccaat------T--CAGTGTACCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCCTTTTTACACTTGACTTTCATCACTAGTGTTGATTGATGGTACGTTATTTACCTGGCGTTGAAGGACTACTAGTTTATAACATTCAAGGCAAAACATTCTAAGTAGTGTGCAATGGGGAGATTTCTTTCTGCTGGGGAAGGTTAATGACCTACCAAAGGAGGAGGGGTCAGTGGATGCTGGGAATAATTAAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878134 500 + 135778131 TTTGAGACGGAAACTCTGCCTTTTGCGTATTATGCATTCTCTTGTCTTTCCTAATCCCTAGTAAAAAATAAAC------------------TTTACCATGTAAAAATCTGTTAATTTCAAGTCAAAGCATGGCTGTATATTCTAGTTAG--TTAAAAAGAAA---TTTTTTTTT------CTGT-----------AGCAACTTGTTGGTTTGGATATTGCCTACTTTGAGGTTCTTCCTCTTTCCCCT---CCCCTGCCCTCCAAT------T--CAGTGTACCTGCTACCTCTCTAAGTGTCAAAGACAAATGATGGATGGTTGTTCAGCTTCTTTGAAATG--CAGCATGTTTTAGTGCCTTTTTACACTTGACTTTCATCACTAGTGTTGACTGATGGTATGTTATTTACCTGGCATTGAAGGACGACTGGTTTATAACATTCAAGGCAAAACATTCTAAGTAGTGTGCAATGGGGAGATTTCTTTCTGCTGGGGAAGGTTAATGACCTACCAAAGGAGGAGGGGTCAGTGGATGCTGGGAATAATTGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188262889 466 - 190850796 ------ATGCAAA-------------------------------TCTTTCTGAATTCCTAATAAAAAATAAAC------------------TTTACCATGTAAAAACCTGTTAATTTGAAGTCAAAGCATGGCTATATTTTCTAGTTAC--TTAAAAGTCTT---TTTTTTTTTTTTTCTCTGT-----------AGCAGCTTGTTGGTTTGGATATTGCTTATTTTGAGGTTCTTCTTC---CCCCT---CCCCTGCCCTTCAAT------T--CAGTGTAGTTGCTCTCTCTCTAAGTGTCAGAGACAAATGACGAACGGTTGTTCAGCTTCTTAGAAATG--CAGCATGTTCTGGTGCCTTTTTACACTTGACTTTCATCAGTAGTGGTGATTGATGGTATGTTATTTACCTGGCATTGAAGGACTACTAGCTCATAACATTCAAGGCAAAAAAGTTTAAGTAGTATGCAGTGTGGAGATTTCTTTATACTGGGGAAGGTTAATGACCTACAAAGAGAGGAGGGGTCGGTGTGTACTGGGAATAAGTGAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84741300 466 - 129401213 TCTTAGATGGAGACTATGT-TTTTGCATACTGTGTATTATTTTACTTTTAATAATCTCTAGTAAAAGCAGCCT------------------TTAATCATTTAAAGAAC-----------------AATATGACTGTTGTTCCTCATTTT--ATGGATGCCAG---TTTCTTCTT------CTGT-----------C----CATATTGGTTTTGATATTGCTTATTTTCACATTTTTTCTCTTTCTCCTCTACTTATAACCCTCAAT------TTGCTGTACAGTTGCTATGTTT----GTGT--AAGACAAATGATAGATGGTTGTTCA---TTTTATAAATGAACAGCATGTCTCAGTGTCTTTTCATACTTGAA-TTCACCACTAGTGTCGACTGATGGTATGGTATTTACCTGGCATTGAAAGATGGCTAGTTTATAATATTCAAGGTGGGATATCTTAAGTAGTATGC---------ATTTCCTTCTACCAGGGAATCTTAATGGCCTGAGAATGGAGGAGGGGCAAGTAGATACTAGAGATGGTTGAT i mm10.chr8 I 1633 I 175 s canFam3.chr16 15746701 478 - 59632846 TTTGAGGCAAGGACTCTGTCTTCTGCATATTGTACATTC-----------ATAATCCCTAGTGAAAAATAAAA------------------TTTACTATGTAAAGATTGGTTGATGT------------TTGCTACCTTTT----------TTAAAAAGAAA---ATCTCCCCC------CCACCACCCCCACCAAGCAATTTATTGGTTTGGATAGTGCTTATTTTGAAG--CTTCATC-TTCCCCC---CACCTGTCCCCCAACCTCAGGT--TGGTGTAGTTGCTACTT----GAGCATCAGAGACAAATGATGGATGGTTGCTCA-CTTCTTATAAATG--CAGAATGTTTTAGTGCCTTTTCATACTTGACTTTCATCGCTAGTGTTGATTGATGATATGTTATTTACTAGACATTGAAGGGCTACTAGTTTCTAACATTCAAGGTAAAATGTTCAAAGCAGTATGCAACACAGAGATTTTCTTCCACCAGGGCAGGTTAATGGCCTATCAAAAGGGGAAAGATCTGTATGTGCTGGGAGTGGTTCAT i canFam3.chr16 C 0 C 0 a score=47181.000000 s hg38.chr4_KI270785v1_alt 76889 13 + 119912 ATCTTCTGAAGCC s panTro4.chr4 190344201 13 + 193495092 ATCTTCTGAAGCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318157 13 + 198332218 ATCTTCTGAAGCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111281340 13 + 115148730 ATCTTCTGAAGCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181082872 13 + 184069350 ATATTCTGAAGCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421084 13 + 189454096 ATATTCTGAAGCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036176 13 + 178775436 ATATTCTGAAGCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878634 13 + 135778131 ATACTCTGAAGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188263355 13 - 190850796 ATCTTCTGGAGCC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15747179 13 - 59632846 GTCTTCTGAAGCC i canFam3.chr16 C 0 C 0 e mm10.chr8 84741766 175 - 129401213 I a score=430261.000000 s hg38.chr4_KI270785v1_alt 76902 108 + 119912 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGATAATTAAGTTAGTAGATTTT--CATCTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTA s panTro4.chr4 190344214 108 + 193495092 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGCTAATTAAGTTAGTAGATTTT--CATCTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318170 108 + 198332218 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGGTAATTAAGTTAGTAGATTTT--CATGTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111281353 108 + 115148730 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGATAATTAAGTTAGTAGATTTT--CATCTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181082885 108 + 184069350 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGATAATTAAGTTAGTAGATTTT--CATCTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421097 108 + 189454096 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGATAATTAAGTTAGTAGATTTT--CATCTTTTTAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036189 108 + 178775436 AAGATTGACTTGTGGGGTAATTTTCATATCCTTGTGATAATTAAGTTAGtagatttt--catctttttaattgcCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878647 108 + 135778131 AAGATTGACTTGGGGGGCAATTTTCATATCCTTGTGATAATTAAGTTAGTAGATTTT--CATCTTTTCAATTGCCCTCAATTTCTTCAGAAGGGGGATTTAGGATGATTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188263368 108 - 190850796 AAGATTCACTTGTGGGATAATTTCCATATCCTTATGAGGATTAAATTAGTAGATTTT--AATATTTTTAATTGCCTTCCATTTCTTCAGAAGAGGGATTTAGGGTGATTG i calJac3.chr3 C 0 C 0 s mm10.chr8 84741941 109 - 129401213 AAGATCAACTTGGTGAAAGATTGT-ATATCTTTTTAATGATTATGTTAGTAAATTTTTCTGTATTTTAAATTATGGCCCATTTCTTTGCAAGGAGAATCTGAGATGTTTA i mm10.chr8 I 175 I 608 s canFam3.chr16 15747192 98 - 59632846 AAGATCTACTTGTGGG---------ATATCCTTTTGATGATTGAGTTGGTGGATTTT--CATCTTTT-AATTGCCTTCAATTTCTTTAGAAGGGAAATTTGGGATGATTG i canFam3.chr16 C 0 C 0 a score=376235.000000 s hg38.chr4_KI270785v1_alt 77010 106 + 119912 GCCTTTTATGGTCAACTTGCTGAAAAATACCTATACAAAGCTTGTATTTAGAAACTA-GAGTCCTTTTTTTCTTCTCTTGTTTAGGTGATGTCGTCCCACAATAACA s panTro4.chr4 190344322 106 + 193495092 GCCTTTTATGGTCAACTTGCTGAAAAATACCTATACAAAGCTTGTATTTAGAAACTA-GAGTCCTTTTTTTCTTCTCTTGTTTAGGTGATGTCGTCCCACAATAACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318278 106 + 198332218 GCCTTTTATGGTCAACTTGCTGAAAAATACCTATACAAAGCTTGTATTTAGAAACTA-GAGTCCTTTTTTTCTTGTCTTGTTTAGGTGATGTCGTCCCACAATAACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111281461 106 + 115148730 GCCTTTTATGGTCTACTTGCTGAAAAATACCTATACAAAGCTTGTATTTAGAAACTA-GAGTCCTTTTTTTCTTGTCTTCTTTAGGTGATGTTGTCCCACAATAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181082993 106 + 184069350 GCCTTTTATGGTCTACTTGCTGAAAAATACCTATACAGAGCTTGTATTCAGAAACTA-GAGTCCTTTCATTCTTGTCTTGTTTAGGTGATGTCATCCCACAATGACA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421205 106 + 189454096 GCCTTTTATGGTCTACTTGCTGAAAAATACCTATACAGAGCTTGTATTCAGAAACTA-GAGTCCTTTCATTCTTGTCTTGTTTAGGTGATGTCATCCCACAATGACA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036297 105 + 178775436 GCCTTGT-TGGTCTACTTGCTGAAAAATACCTATACAAAGCTTGTATTCAGAAACTA-GAGTCCTTTCATTCTTGTCTTGTTTAGGTGATGTCATCCCACAATGACA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878755 106 + 135778131 GCCTTTTATGGTCTACTTGCTGAAAAATGCCTATACAAAGCTTGTATTCAGAAACTA-GAGTCCTTTTATTCTTGTCTTGTTTAGGTGATGTCATCCCACAataaca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188263476 106 - 190850796 GCCTTTTATGGTCTACTTACTGAAAAATACCGATACCAAGCTTGTGTTTAGAAAGTA-GAGTCCTCCTTTTCTCATCTTGTTTAGGTGAGGTTGTCCCACAATAACG i calJac3.chr3 C 0 C 0 s mm10.chr8 84742658 105 - 129401213 gtcttaagtggtcaCTTGACTGAAAAACGCCTATACAAAACTTATATTTGACAACTATGAGACTCCTTTTTCTTTCCTTGTT--GTGAATCTCATTTGACAGTACCA i mm10.chr8 I 608 I 600 s canFam3.chr16 15747290 101 - 59632846 GCCGTTAATGGTCTACTTGCTG-AAAATACCTATACAAAACTTGTGTTTAGGAATCC-CATTGCCT---TGCTCTCCCTAGTTTGGCAATATTGTTGCACA-TAACA i canFam3.chr16 C 0 C 0 a score=39355.000000 s hg38.chr4_KI270785v1_alt 77116 23 + 119912 -----CTTACTCGACATTTATGTAGGGG s panTro4.chr4 190344428 23 + 193495092 -----CTTACCCGGCGTTTGTGTAGGGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318384 22 + 198332218 -----CTTAC-CAGCGTTTGTGTAGAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111281567 23 + 115148730 -----CTTACCTGGCGTTTGTGTAGGGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181083099 19 + 184069350 -----CC----CGGTGTCTGTGTAGGGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421311 19 + 189454096 -----CC----CGGTGTCTGTGTAGGGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036402 19 + 178775436 -----CC----CGGTGTCTGTGTAGGGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878861 17 + 135778131 -----cc----ca--gtctgtgtagggg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188263582 23 - 190850796 -----CTTACCTGGTGTTTGTGTAGAGG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15747391 28 - 59632846 CCAACTTTACTGCGTGTTTGTTTAGGAG i canFam3.chr16 C 0 C 0 e mm10.chr8 84742763 600 - 129401213 I a score=1733282.000000 s hg38.chr4_KI270785v1_alt 77139 543 + 119912 AGGTA-ATTCTTTTGGTTGTACTGCAGAGACCAAGAATACATTTTGTACTTCATTTACATTCCCCAGAATACTTAATATA--ATGTTGATGACATGGTA-AGAACACAATATCTCAGTATTTTGTGGCTGAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCTCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGCAGCAAAGATTTTGTTGAAATATGATTTTCAGAATCTTGAA--------TTTACAAG--TGTTTGTTTGTTTTTGATTATACCATGGTTATACTATA----GATGATAGAGGGATGATTTTGAATCAAAA--AGA-AAAAAAAGAAAATATATGTATGGAGGCTGAAGTCATAGACAATTTTTGATGGGATAAATGTTGCCAATAATTTTTCCATTAGGCTTTAGTTTG-TGTGTTCAGCA--TTTG---AATTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAAATTAATGGAGCATTAA--AACATCAAACAGTTTTGAATCTTTCAAGTATT s panTro4.chr4 190344451 545 + 193495092 AGGTA-ATTTTTTTGGTTGTACTGCAGAGACCAAGAATACATTTTGTACTTCATTTACATTCCCCAGAATACTTAATATATAATGTTGATGACATGGTA-AGAACACAATATCTCAGTATTTTGTGGCTGAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCTCATTTTTTAAACTTTCTGTTTACAGAAAATGAGAAAGGGCAGCAAAGATTTTGTTGAAATATGATTTTCAGAATCTTGAA--------TTTACAAG--TGTTTGTTTGTTTTTGATTATACCATGGTTATACTATA----GATGATAGAGGGATGATTGTGAATCAAAA--AGA-AAAAACAGAAAATACATGTATGGAGGCTGAAGTCATAGACAATTTTTGATGGGATAAATGTTGCAAATAATTTTTCCATTAGGCTTTAGTTTG-TGTGTTCAGCA--TTTG---AATTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAAATTAATGGAGCATTAA--GACATCAAACAGTTTTGAATCTTTCAAGTATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318406 543 + 198332218 AGGTA-ATTTTTTTGGTTGTACTGCAGAGACCAAGAATACATTTTGTACTTTGTTTACATTCCCCAGAATACTTAATATA--ATGTTGATGACATGGTA-AGAACACAACATCTCAGTATTTTGTGGCTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAGTCTCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGTGGCAAAGATTTTGTTGAAATATGATTTTCAGAATCTTGAA--------TTTACAAG--TGTTTGTTTGTTTTTGATTATACCATGGTTATACTATA----GATGATAGAGAGATGATTGTGAATCAAAA--AGA-AAAAAAAGAAAATATATGTATGGAGGCTGAAGTCACAGACAATTTTTGATGGGATAAATGTTGCAAATAATTTTTCCATTAGGCTTTAGTTTG-TGTGTTCAGCA--TTTG---AATTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAAATTAATGGAGCATTAA--AACATCAAACAGTTTTGAATCTTTCAAGTATT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111281590 541 + 115148730 AGGTA-ATTTTTTTGGTTGTACTGCAGAGACCAAGAATACATTTTGT-CTTCATTTACATTCCCCAGAATACTTAATATA--AAGTTGATGACATGGTA-AGAACACAACGTCTCAGTATTTTGTGGCTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCTCATTTTTTAAACTTTCTGTTTTCAGAAAATGACAAAAGGCAGCAAAGATTTTGTTGAAATATGATTTTCAGAGTCTTGAA--------TTTACAAA--TTTTTGTTTGTTGTTGATTATACCATGGTTATACTATA----GATGATAGAGAGATGATTGTGAATCAAAA--AGA-GAAAAAAGAAAATATATGTATTCAGGCTGAAGTCATAGGCAATTTTTGATGGGATAAATGTTGCAAATAATATTTCCATTAGGCTTTAGTTTG-TGTGTTCAGCA--TTTG----ATTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTG-AAATAACAAATTAGTGGAGCATTAA--AACGTCAAACGATTTTGAATCTTTCAAGTATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181083118 537 + 184069350 AGGTA-ATTTTATTGGCTGTACTGCAGAGACCAATAATACATTTTGTACTTCATTTACATTCCCCAGAATATTTAATATG--ATATGGATGACATGGTA-AGAACACAACATCTCAGTATTTTGTGACTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCGCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGCAGCAAAGATTTTGTTGCAATATGATTTTCAGAATCTTGAA--------TTTACAAGTTTTTTTGTCTGTTGTTAATTATATCATGGTTATACTATA---------------GATGATTGTGAATCAAAG--AAG-AAACAAAGAAAACAAGTGTGCGCAGGCTGAAGTCATAGACAGGCTTTGATGGGACAAATGTTGCAAAAAATACTTGCATTGGGCTTAAGTTTG-TGTGTTCAGCA--TTTGTTTTTTTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAGATTAATGGAGCATTAC--AACATCAAACAGTTTTGAATGTTCCAAGTATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421330 533 + 189454096 AGGTA-ATTTTATTGGCTGTGCTGCAGAGACCAAGAATACATTTTGTACTTCATTTACATTCCCCAGAATATTTAATATG--ATATGGATGACATGGTA-AGAACACAACATCTCAGTATTTTGTGACTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCGCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGCAGCAAAGATTTTGTTGCAATATGATTTTCAGAATCTTGAA--------TTTACAAG-TTTTTTGTCTGTTGTTAATTATATCATGGTTATACTATA---------------GATGATTGTGAATCAAAG--AAG-AAACAAAGAAAACAAGTGTGCGCAGGCTGAAGTCATAGACAGGCTTTGATGGGACAAATGTTGCAAAAAATACTTGCATTGGGCttaagtttg-tgtgttcagca--tttg---ttttttt-tt-tagttcattttcaggtcacatt-------ttagttttatgtttCTTA-AAATAACAGATTAATGGAGCATTAC--AACATCAAACAGTTTTGAATGTTTCAAGTATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036421 531 + 178775436 AGGTA-ATTTTATTGGTTGTACTGCAGAGACCAAGAATACATTTTGTACTTCATTTACACTCCCCAGAATATTTAATATG--ATATGGATGACATGGTA-AGAACACAACATCTCAGTATTTTGTGACTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATcgcattttttaaactttctgttttcagaaaatgagaaagggCAGCAAAGATTTTGTTGCAATATGATTTTCAGAATCTTGAA--------TTTACAAG-TTTTTTGTCTGTTGTTAATTATATCATGGTTATACTACA---------------GATGATTgtgaatcaaag--aagaaaaaaaagaaaacaaatgtatgcAGGCTGAAGTCATAGACAATTTTTGATGGGATAAATGTTGCAAAAAATACTTGCATTAGGCTTAAGTTTG-TGTgttcagca--tttg-ttttttttt-tt-tagttcattttcaggtcacatt-------ttagttttatgtttct------tAACAGATTAATGGAGCATTAC--AACATCAAACAGTTTTGAATGTTTCAAGTATT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132878878 535 + 135778131 aggta-attttATTGGTTGTACTGCAGAGACCAAGAATACATTTTGTACTTCATTTACATTCCCCAGAATATTTAATATG--ATATGGATGACATGGTA-AGAACACAACATCTCAGTATTTTGTGACTAAGTGAATGAC----AATGCATAACCTTAATTCTAATTTGGTGTCAATCGCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGCAGCAAAGATTTTGTTGCAATATGATTTTCAGAATCTTGAA--------TTTACAAGTTTTTTTGTCTGTTGTTAATTATATCATGGTTATACTATA---------------GATGATTGTGAATCAAAG--AAG-AAA-AAAGAAAATAAGTGTATGCAGGCTGAAGCCATAGACAGTTTTTGATGGGAAAAATGTTGCAAAAAATACTTGCATTAGGCTTAAGTTTG-TGTGTTCTGCA--TTTG-TGTTTTTTT-TT-TAGTTCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAGATTAATGGAGCATTAC--AACATCAAACAGTTTTGAATGTTTCAAGTATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188263605 547 - 190850796 AGGTA-ATTTTACTGGTTGTACTGAGGAGACCAAGAATACATCTTGTGTATCGTTTACATTCCCCATAGTATTTAATATA--ATATTGACGACATAGCA-AGAATACAACATCTCAATATTTTGTGGCTAAGTGAATGAT----AATGAATAACCTTAATTCTAAT----TGTCAATCTCATTTTTTAAACTTTCTGTTTTCAGAAAATGAGAAAGGGCAGCAAACATTTTGTTGAAATATGATTTTCAGAATCTTGAATTTAACTTTTTACAAG-TTTTTTCTTTGTTGTTGATTATAT-ATGGTTATACTATA----GATGATAGAGAGGAGATTGGGAATCAGAG--AAA-AAA-ATAGAAAATATATGTATGCAGGCTGAAGTCAGAGACAATTTTTGATGGGTTAAATGTTGTAAATAATATTTCCATGAGGCTTTAGTTTG-TGTGTCCAGCA--TTTG---AATTTCTATT-TAGTGCATTTTCAGGTCACATT-------TTAGTTTTATGTTTCTTA-AAATAACAAATTAATGGGGCATTAA--AACATGAAACAGTTTTGAATGTTTCAGGCATT i calJac3.chr3 C 0 C 0 s mm10.chr8 84743363 478 - 129401213 AGGTG-ATGCT-----TTGTCCTGTAATGGAAGAGAACACAACTTCAACTTCATTTCTCTTCCCTAGAGCAGCTAATACA--CTGTGGATCATACAGAA-AGAGGCCTA--------------------AAATAAGTGACT---TAGGCATTACTAAAATTCTAATT---TGTCAGTCTCACTTTTCAACCATT-----------GAAGAAGTAACATTTCCAGAAACATCatttaaataatattttaaaaattatgaa--------ttt--aaa---------------ttaactttatgaaaatt------ta---------------GAGTGTTAAAAATGAAAGCTGAG-AAAAACAGAAAACATGTTTACCAAGG-TGGAGACACAGACGAGTTTTGGGGGTGTGTACA-GGCGAATGTTAGTT-CTCTAAGCCCCACTCTT-CACACACAACAGTTTTG---AGTTCCAGTG-TAGTTGACATTTGGGTCATACTATACAAATCAAATTAATGTT------AAATCTCAAATTAATGGAATACTAA-TAATACCAAATACTTTTGCATATGTCTAGAATT i mm10.chr8 I 600 I 642 s canFam3.chr16 15747419 548 - 59632846 --ATACATTTTATTGCTTGTACTGCAGAGACAGAGGACACACCTTCTGTTTCGCTTACATTCC--AGACTGTTTAATAGA--ATCTGGGTTAGGTGGTAGAGGGTGCAATACCTCAATG-TTTGTGGCTTAGTGAATGACTGACAATGAATGACCTAAATTCTAATC---TGTCAGTCTCACTTT---ATCTTTCTG---AGAAAAAAAAAAAAAAGGCATCAAACATCTTGTTAAAATATGATTTTTGGACTCTGGAT-TGAGC--TTTATAAA-----TTGTTTCATTTTGGTAATACCATGGCTATACGATAGATAGATGACAGAGAGATGACTGTGAAGCAAAGTAGGG-AAAAGTAGAAAATATATGTATGTAGGTTGAAGTAATACGCATCTTTTGATGGGATAAATGTTGTGAATAACAGCTCCACTGGGCTCTGGTTTGCTAACCTAAGCA-CTTTG---AATTTCT-TTATAATTCATTTTCAGGTCATTTG-------TTAGTTTTATGTTTCTTACAAGAAACAAATTAATTGAGCATTAAAAAACGTCAAACATTTTTGGATAATAC-AGCACT i canFam3.chr16 C 0 C 0 a score=444012.000000 s hg38.chr4_KI270785v1_alt 77682 144 + 119912 GAAAACACATTATGCTGAAATTTTTG-AAAGTAAAAACAGTATGA--AGGCCAGGATTTCCAGAAGATTGACATAAATGAGTGGGATATCATCTGTTAACTTTTAAATAAACTTCAGATTGATTTGTGTCTGGGAAGAAGACCCTTT s panTro4.chr4 190344996 144 + 193495092 GAAAACACATTATGCTGAAATTTTTG-AAAGTAAAAACAGTATGA--AGGCCAGGATTTCCAGAAGATTGACATAAATGAGTGGGATATCATCTGTTAACTTTTAAATAAACTTCAGATTGATTTGTGTCTGGGAAGAAGACCCTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195318949 144 + 198332218 GAAAACACATTATGCTGAAATTTTTG-AAAGTAAAAACAGTATGA--AGGCCAGGATTTCCAGAAGATTGACATAAATGAGTGGGATATCATCTGTTAACTTTTAAATAAACTTCAGGTTGATTTGTGTCTGGAAAGAAGACCCTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111282131 143 + 115148730 G-AAACACATTATGCTGAAATTTTTG-AAAGTAAAAACAATATAA--AGGCCAGGATTTCCATAAGATTGACATAAATGAGTGGAATATCATCTGTTAACTTTTAAATAAACTTCAGATTGATTCGTGTCTGGGAAGAAGACCCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181083655 144 + 184069350 G-AAACACAGTATGCTGAAATGTTTGAAAAGTAAAAACAGTATAA--AGGCCAGGATTTCCATAAGATTGACATAAATGAGTGGAATATCATCTGTTAACTTTTAAATAAATTTCCGATTGGTTTGTATCTGGGAAGAGGACCCTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186421863 144 + 189454096 G-AAACACAGTATGCTGAAATGTTTGAAAAGTAAAAACAGTATAA--AGGCCAGGATTTCCATAAGATTGACATAAATGAGTGGAATATCATCTGTTAACTTTTAAATAAATTTCCGATTGGTTTGTATCTGGGAAGAGGACCCTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176036952 144 + 178775436 G-AAACACAGTATGCTGAAAtgtttgaaaagtaaaaacagtATAA--AGGCCAGGATTTCCATAAGATTGACATAAATGAGTGGAATATCATctgttaacttttaaataaatttctgattGGTTTGTATCTGGGAAGGGGACCCTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132879413 144 + 135778131 G-AAACACAGTATGCTGAAATGTTTGAAAAGTAAAAACAGTATAA--AGGCCAGGATTTCCATAAGATTGACATAAATGAGTGGAATATCATCTGTTAACTTTTAAATAAATTTCTGATTGGTTTGTATCTGGGAAGAGGACCCTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188264152 138 - 190850796 G-GAAAATATTATGCTGAAATTTTTG-AAAGTAAAAATGGTATAA--ACACTAGGATTTCCATAAGATGGACATAAATGAGTGGAATATCATCTGTTAACTTTTAAACAAACTTCAGA----TCTGTTCCTGGGAAGAAGACGC-TT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15747967 144 - 59632846 -TTAAGTAATCCAGCTTAGATTTTTA-AAAGC-AAAACAGCCCAAATAAACCAGAATTTGCATAAACCTGACATAAATGAATGAAATATTATTTGTTGACTTTTCAGCAAACTTCAGATTGATCTTTGGGGGGGGGGAAGATCTTGT i canFam3.chr16 C 0 C 0 e mm10.chr8 84743841 642 - 129401213 I a score=3416716.000000 s hg38.chr4_KI270785v1_alt 77826 908 + 119912 ---------TCTATGCAG--------------GCTGGAAGGGGGATTTGCTGGCATTCCCGAGTGGTTACAACTTTGTGGAGTTAATATTTAATGTGCCATTTTATA-GCA-----TATACAGATTTAGAAGCT-GAAAAGATAC----TAAGACAATATAATATGAATTTATCATCAATTTCATAGCATGAAACTGAAGAAACTAC---TTTTTGTACTGTTTTAAGGAAATCCTATCATCATATGGTGA-CTGTACAACATTAAAGCAACATTCTGGAAAGAAATTGCCAGGTATGT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCATTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAATTGGCAATAAAACAATAGCATTTGTTTAAACAG--AAAAAAAAATTCCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCGCGTTATGGGAGTTCTCATAGTTATATGTTGAAACAGGGCAGCTTTTCAAAAACTGTCAAGTTTAGTGTTTCAAAGGCATGTTGAAGAATGAAGACGGGG---------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTCAAGTGATTTTAGAG-CTTCTGAAGGAG--CAGTTTTCAACCTTAAATATCTAAGTCAACACTTTTTCTTTAGTAA----------GAGAGGTGACCTTAGAAAT-GTCCTTGGTCTAAGTGAAAATACTGGCCAATTC--AAGACACAGCAATGTAGATCAATCCTTATTCTTTAACTTTCTGAACAAAAGTTTAAAAACATTCC--AAATTTATTTTCATTGATGGAAGAGATTCCTGTTTATATTTTGTTATTTTTAAAATAAATGAAAATGAGGTTATCAGTCAAAGG s panTro4.chr4 190345140 908 + 193495092 ---------TCTATGCAG--------------GCTGGAAGGGGGATTTGCTGGCATTCCCGAGTGGTTACAACTTTGTGGAGTTAATATTTAATGTGCCATTTTATA-GCA-----TATACAGATTTAGAAGCT-GAAAAGATAC----TAAGACAATATAATATGAATTTATCGTCAATTTCGTAGCATGCAACTGAAGAAACTAC---TTTTTGTACTGTTTTAAGGAAATCCTATCATAATATGGTGA-CTGTACAACATTAAAGCAACATTCTGGAAAGAAATCGCCAGGTATGT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTGTAGGAATTTA-TAACAAGTTCTGACAGCATTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAATTGGCAATAAAACAATAGCATTTGTTTAAACAG--AAAAAAAAATTCCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCGCGTTATGGGAGTTCTCATAGTTATATGTTGAAACAGGGCAGCTTTTCAAAAACTGTCAAGTTTAGTGTTTCAAAGGCATGTTGAAGAATGAAGACGGGG---------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTCAAGTGATTTTAGAG-CTTCTGAAGGAG--CAGTTTTCAACCTTAAATATCTAAGTCAACACTTTTTCTTTAGTAA----------GAGAGGTGACCTTAGAAAT-GTCCTTGGTCTAAGCGAAAATACTGGCCAATTC--AAGACACAGCAATGTAGATCAATCCTTATTCTTTAACTTTCTGAACAAAAGTTTAAAAACATTCC--AAATTTATTTTCATTGATGGAAGAGATTCCCGTTTATATTTTGGTATTTTTAAAATAAATGAAAATGAGGTTATCAGTCAAAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195319093 909 + 198332218 ---------TCTATGCAG--------------GCTGGAAGGGGGATTTGCTGGCATTCCTGAGTGGTTACAACTGCGTGGAGTTAATATTTAATGTGCCATTTTATA-GCA-----TATACAGATTTAGAACCT-GGAAAGATAC----TAAGACAATATAATATGAATTTATCGTCAATTTCATAGCATGAAACTGAAGAAACTAC---TTTTTGTACTGTTTTAAGGAAATCCTATCAGAATATGGTGA-CTGTACAACATTAAAGCAACATTCTGGAAATAAATTGCCAGGTATGT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTACAGGAATTTA-TAACAAGTTCTGACAGCATTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAATTGGCAATAAAACAATAGCATTTGTTTAAACAG-AAAAAAAAAATTCCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCACGTTATGGGAGTTCTCATAGTTATATGTTGAAACAGGGCAGCTTTTCAAAAACTGTCAAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGACGGGG---------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTTAAGTGATTTTAGAG-CTTCTGAAGGAG--CAGTTTTCAACCTTAAATATCTAAGTCAACACTTTTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGAAAATACTGGCCAATTC--AAGACACAGCAACGTAGATCAATCCTTATTCTTTAACTTTCTGAACAAAAGTTTAAAAACATTCC--AAATTTATTTTCATTGATGGAAGGGATTCCCGtttatattttgttatttttaaaataaatGGAAATGAGGTTATCAGTCAAAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111282274 909 + 115148730 ---------TCTATGCAG--------------GCTGGAAGCGGGATTTGCTGGCATTCCCGAGTGGTTACAACTGTGTGGAGTTAATATTGAATGTGCCATTTTATA-GCA-----TATACAGATTTAGAAGCT-GAAAAGATAC----AAAGACAATATAATATGAATTTATCATCAATTTCATACCATGAAACTGAAGAAACTAC---TTTTTGTACTGTTTTAAGGAAATCCTATCATAATATGGTGA-CTGTACAACAGTAAAGCAACATTCTGGAAGTAAATTGCCAGGTATGT-AGTCACAGGTTCAAAGAATGACTGGAAGCTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCATTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAATTGGCAATAAAATAATAGCATTTGTTTAAACAG-AAAAAAAAAATTCCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCACATTATGGGAGTTCTCATAGGTATATGTTGAAACAGGGCACCTTTTCAAAAACTGTCAAGTTTAGTGTTTCAAAAGCATGTTGAAGAATTAAGACGGGC---------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTTAAGTGATTTTAGAG-CTTCTGAAGGAG--CGGTTTTCAACCTTAAATATCTAAGTCAACACTTTTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGGAAGTATTGGCCAATTC--AAGACACAGCAATGTAGATCAATCCTTATTCTTTCACTTTCTGAACAAAAGTTTAAAAACATTCC--AAATTTATTTTCATTGATGGAAGAGATTCCTGCTTATATTTTGTTATTTTTTAAATAAATGAAAATGAGGTTATCAGTCAAAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181083799 903 + 184069350 ---------TCTCTGCAG--------------GCTGGGC-GGGGA-ATGCTGGCATTCC-AAGTGGTTACAACTGCATGGAGTTAATATTTAATGTGCCATTTTACA-GCA-----TACACAGATTCAGAAGCT-GAAAAGATAC----TAAGACAATATAATATGAATTTATCATCAATTTCATAGTGGAAAACTGAAGAAACTAC---TTTTTATACTGTTTTAAGGGAATCCTATCATAATATGGTGA-CTGTACAACATTAAAGCAACAATCTGGAAATAAATTGCCAGGTGTCT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCACTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAACTGGCAATAAAACAATAGCATTTGTTTAAACAGAAAAAAAAAAAATTCACTGCATTCCTTC-TTTTGAAAGAAAGCAGCCGCATTATGGGTGTTCTCATAGTTATATGTTGAAACAAGGCACCTTTTCAAAACCTGTCGAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGACGGG----------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTTAAGTGATTTTCGAG-CTTCTGAAGGAG--TGATTTTCAACCTTAAATATCTAAGTCAACA---CTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGAAAATACTGGCCGATTC--AAGACACAGCAATGTAGGTCAATCCTTGTTCTTTAACTTTCTGAACAAAAGTTTAAAAAGAGTCC--AAATTTATTTTCATTGATGGAAGGGATTCCTGtttatattttgttatttttaaaataaatgaaaattaGGTTATCAATCAAAGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186422007 902 + 189454096 ---------TCTCTGCAG--------------GCTGGGCGGGGGA-ATGCTGGCATTCC-AAGTGGTTACAACTGCATGGAGTTAATATTTAATGTGCCATTTTATA-GCA-----TACACAGATTCAGAAGCT-GAAAAGATAC----TAAGACAATATAGTATGAATTTATCATCAATTTCATAGTGTAAAACTGAAGAAACTAG---TTTTTATACTGTTTTAAGGAAATCCTATCATAATATGGTGA-CTGTACAACATTAAAGCAACAATCTGGAAATAAATTGCCAGGTGTCT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCACTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAACTGGCAATAAAACAATAGCATTTGTTTAAACAG--AAAAAAAAAATTCACTGCATTCCTTC-TTTTGAAAGAAAACAGCCGCATTATGGGTGTTCTCATAGTTATATGTTGAAACAAGGCACCTTTTCAAAACCTGTCGAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGACGGG----------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTTAAGTGATTTTTGAG-CTTCTGAAGGAG--CGATTTTCAACCTTAAATATCTAAGTCAACA---CTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGAAAATACTGGCCGATTC--AAGACACAGCAATGTAGGTCAATCCTTGTTCTTTAACTTTCTGAACAAAAGTTTAAAAAGAGTCC--AAATTTATTTTCATTGATGGAAGGGATTCCTGTTTATATTTTGTTATTTTTAAAATAAATGAAAATTAGGTTATCAATCAAAGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176037096 901 + 178775436 ---------TCTCTGCAG--------------GCTGGGCGGGGGA-ATGCTGGCATTCC-AAGTGGTTACAACTGCATGAAGTTAATATTTAATGCGCCATTTTATA-GCA-----TACATAGATTCAGAAGCT-GAAAACATAC----TCAGACAATATAATATGAATTTATCATCAATTTCATAGTGTAAAACTGAAGAAACTAC---TTTTTATACTGTTTTAAGGAAATCCTATCATAATATGGTGA-CTGTACAACATTAAAGCAACAATCTGGAAATAAATTGCCAGGTATCT-AGTCACAGGTTCAAAAAATGACTGGAAACTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCACTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAACTGGCAATAAAACAATAGCATttgtttaaacag---aaaaaaaaattccctgcaTTCCTTC-TTTTGAAAGGAAACAGCCGCATTATGGGTGTTCTCATAGTTATATGTTGAAACAAGGCACCTTTTCAAAACCTGTCGAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGACGGG----------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTGCTTAAGTGATTTTCGAG-CTTCTGAAGGAG--CGATTTTCAACCTTAAATATCTAAGTCAACA---CTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGAAAATACTGGCCAATTC--AAGACACAGCAATGTAGGTCAATCCTTGTTCTTTAACTTTCtgaacaaaagtttaaaaactttcc--aaatttattttcattgatagAAGGGATTcctgtttatattttgttatttttaaaataaatgaaaattaggtTATCAATCAAAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132879557 905 + 135778131 ---------TCTATGCAG--------------GCTGGGCGGGGGA-ATGCTGGCATTCC-AAGTGGTTACAACTGCATGGAGTTAATATTTAATGTGCCATTTTATA-GCA-----TACACAGATTCAGAAGCT-GAAAAGATAC----TAAGACAATATAATATGAATTTATCATCAATTTCATAGTGTAAAACTGAAGAAACTAC---TTTTTATACTGTTTTAAGGAAATCCTATCATAATACGGTGA-CTGTACAGCATTAAAGCAACAATCTGGAAATAAATTGCCAGGTATCT-AGTCACAGGTTCAAAGAATGACTGGAAACTGAGGAACTTTCACATAGTGTATAGGAATTTA-TAACAAGTTCTGACAGCACTGTTAACTGATT-----AAAAATACCTAATAAGGCTGCTGGATTTGTTAATGAGTACTTTTAAG-GCAAAACTGGCAATAAAACAATAGCATTTGTTTAAACAG--AAAAAAGAAATTCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCGCACTACGGCTGTTCTCACAGTTATATGTTGAAACAAGGCACCTTTTCAAAACCTGTCGAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGACGGG----------------------------------GTGTGTGTAAATAAATGTGCTGATTGCATAAAGGCTGCTTCTAGTTTTCCTTAAGTGATTTTAGAG-CTTCTGAAGGAG--CAGTTTTCAACCTTAAATATCTAAGTCAACACTTCTTCTTTAGTAA----------GAGAGGTGACCTTAAAAAT-TTCCTTGGTCTAAGTGAAAATACTGGCCAATTC--AAGACACAGCAATGTAGGTCACTCCTTGTTCTTTAACTTTCCGAACAAAAGTTTAAAAACAGTCC--AAATTTATTTTCATTGATGGAAGGGATTCCTGTTTATATTTTGTTATTTTTAAAATAAATGAAAATTAGGTTATCAATCAAAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188264290 911 - 190850796 ---------TCTATGCAG--------------GCTGGAAGGGCAATTTGCTGGCATTTCCAAGTGGTTACAACTGCATGGAGTTAATATTTGATGTGCCGTTTTATAGGCA-----TATATAGCTTTAGAAGTT-GAAAAGATGC----TGAGATGATATAATATGAATTTATCATTAATTTCATAGTGTGAAACTGAAGAAACTAC---TTTTGGTACTGTTTTAAGGAAATCCTATCATAATATAGTGA-CTATACAATGTTAAAACAATACTCTGGAAACAAATTGCCAGGTATGT-AGTCAC-GGATCAAAGAATGACTGGAAACTGAGGAACTTTCACGTAGTGCCTAGGAATTTA-TAACAGGTTCTGACAGCATGGTTATCTGATC-----AAAAACACCTAATAAGGCTGCTGGATTTGCTAATGAGTGGTTTTAAG-GCAAAATTGGCAATAAAACAATAGCATTTGTTTAAACAG-AAAAAAAAAATTCCCCTGCATTCCTTC-TTTTGAAAGGAAACAGCCACGTTATGGGTGTTCTCATAGTTATATGTTGAAACAAGGCACCTTTTCAAAAACTGTCAAGTTTAGTGTTTCAAAGGCATGTTGAAGAATTAAGATGGGT---------------------------------GCGTGTGTAAATAAATGTGCTGATTGCATAGAGGCTGTTTCTAGTTTTGCTTAAGTGATTTTAGAG-CTTCTGAAGGAGTACAGTTTTCAACCTTAAATATCTAAGTCAACACTTTTTCTTTAGTAA----------GAGAGGTGACCTCAAAAAT-GTCCTTGGTCTAAGTCTGCATACTGACCGACTC--AAGACACAGCAATGTAGATCAATTCTTATTCTTTAACTTTCTGAACAAAAGTTGGAAAACCTTCC--AAATCCATTTTCATTGATGGAAAAGATTATAGTTTAAATTTTGTTATTTTTAAAGTAAATGAAAATGAGGTTATCGGTCAAAGG i calJac3.chr3 C 0 C 0 s mm10.chr8 84744483 929 - 129401213 ---------TCTGTGCAG--------------GCCAGGAGAGATGCCTGCTGATAATTC----------TAATTGTAT----------CCTAGTGTGCCG---TGTA-GCATTAAGTACACAGGCTAAG-AGCT-GGGAAAACACTGAATGAGCTAATGTAGAATGAATTCATCATCAGCTTCATGAAATGAGGTTGAAGAAACTCTGCACGCCCATCCCATTTTAAGGAAATTCTATCAGAACTTAATGACCTAGGCAATGTGAAAGCAGTGCTCT-GAAGCGAAGGGTGAGCTGTGT-GGTTCCAGATCCCAAG-CTTACTAGAGAAGAGGGAACTGTCATAGGCTGCGTGAGAGTTTAGCAGCAAGTTCTGACAGCATATTTAACTGATTTAAAAAAAAAGACCTAATAAGGTTTCAGAAGTCATTAAT-AGTACATTTAAGAGAAAAGTTGGCACTAAAACTATAGCATTTGTTTAAACAG--GGAAAAAAAAT-CCCTGCATTCCATC-TTTTGCAAGGAAACTGGAGGGTC-TGGGTGT--TCATAGTCTTATGTTGAAACAAGGCACTACTTCAAGAACTGTCAAGTTTAGTGTTTCAAAGACTCTCTAAAGAATTAGGAAGTGGGgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgAATAAATGCCCCCTTGGACTAAAATCTGCTTCTAGCTTTGTCTGAGTGATTTCTGGGTCTTCAGGAGGAGTGTGATTTTTAAGGGTACATATCAAAGCCAGTCATTTTCCTTTCGGAAAACCATGTATAAGAAGTGACCTTACACAT-TTCCATACTCTGGACACTAATCCTGGCCAGTTCATAGGGCACACTAAT--------ACCTATGTTAATGGGTTTTCTGAACAAAACTTTCCCAA---TTC--AAAGTTGTTTCCACTGAGGCAAACGATTCCCGTCGA-----CGTCATTTCCAAAATAGAGGGAAATGAAGTTATCAACCCGAGA i mm10.chr8 I 642 C 0 s canFam3.chr16 15748111 935 - 59632846 TGGAAGGGGCATTTGGGGTGGGGGAAGATCTTGTTGGAAGGGGCA-TTGCTGTCACTTCTAAAAGCTTCCAACTAAGTGGGATTAATATTTAAGGTGCCATT---TA-ACA-----CATACTGATGAAGAAGGTAGAAAAAACAC----TTATACAATGTAATATGAAGTTGTCAGCAATTTCATGAAATGAAACTGAAGATACTAG---CTTTTGTTCTGTTTTAAGGAAATCCTACCGTAGCATGATGA-T------ACATTAAAGGAGCATTTGGGAAATAAATTGTCAGGTATGTAAGTTACAAGTTCAAAGGATGACTAAAGACTGAGAAACTTGCATATAGCCTATGAGAATTCA-CAACAAGTTCTAACAGCATTGTTAACTGATT-----AAAAATACCTAATAAGTTTGCTGGAATCATTAATGGGTTCTTTTAAA-GAAAAATTGGCAATAAAACAATAGCATTTGTTTAAACAG--AAAAAAAAAATCCCCTGCATTCCTTCTTTTTGAAAAGAAACAGCCGCATTATGGGTGTTCTCATAGTTTTATGTTGAAACAAGGCACCTTTTCAAAACC-ATCAAGTTCAGTGTTTCAAAGACATGTTGAAGAATTAAGACAGT----------------------------------GGGTGTGTAAATAAATGTGCTGATTGCAAAAAAACTACTTCTAGTTTTGCTCAAGTGATTTTAGAG-CTTCTGAAAGGGTATGGTTTTAAA--GTAAATCTCTAAGTCAATAATTTTCCTTTAGTTATAATGTATATACAAAGTGACCTTAAAAATGTTCCTTTGCCTAAGTAAGAATTCTGCTCAGCTC--AAGACCTGGTCCTGTAGGTCAATCTCTATTCTTTAATCCTCTGAACAGAAGTCTAAAAACATTCCAGAAAATTTTTTCCATTGATATAAGTGGTTCCAATTTAAGGTTAGTCATGTTCAAAACAGAAGAAAATTAGGCTATCAACCAAAGG i canFam3.chr16 C 0 I 345 a score=410775.000000 s hg38.chr4_KI270785v1_alt 78734 133 + 119912 TGGTTTGAAAAAACTTCTACTCCATTTCCAGCGTGATGTCAGGGAAC--CCGACAG--CAGTCACAGGCACTCTGCTTTCACACTAATAATTTGTGATCTAATCGGTAAAATTAGATCAGTATGCAAAACTATTAGA s panTro4.chr4 190346048 133 + 193495092 TGGTTTGACAAAACTTCTACTCCATTTCCAGCGCGATGTCAGGGAAC--CCGACGG--CAGTCACGGGCACTCTGCTTTCACGCTAATAATTTGTGATCTAATCGGTAAAATTAGATCAGTATGCAAAACTATTAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320002 132 + 198332218 TGGTTTGAAAAAACTT-TACTTCATTTCCAGCGTGATGTCAGGGAAC--CCGACAG--CAGTCACAGGCACTCTGCTTTCATGCTAATAATTTGTGATCTAATTGGTAAAATTAGATCACTATGCAAAACTATTAGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111283183 132 + 115148730 -GGTTTGGAAAAGCTTCTACTCCATTTCCAGCGTGATGTAAGGGAAA--CCAATAG--CAGTCACAGGCACTCTGCTTTCACTCTAGTAATTTGTGATCTAATTGGCAAACTTAGATCAGTATGCAAAACTATTAGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181084702 132 + 184069350 TGGTTTGA-AAAACTTCTACTCCATTTCCAGCGTGATGTAAGAGAAC--CCAACAG--CAGTCACAGGTACTCTGCTTTCACTCTAATAATCTGTGAACTAATTGGTAAAATTAGATCAGTATGCAAAACTGTTAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186422909 132 + 189454096 TGGTTTGA-AAAACTTCTACTCCATTTCCAGCGTGATGTAAGAGAAC--CCAACAG--CAGTCACAGGTACTCTGCTTTCACTCTAATAATCTGTGAACTAATTGGTAAAATTAGATCAGTATGCAAAACTGTTAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176037997 132 + 178775436 TGGTTTGA-AAAGCTTCTACTCCATTTCCAGCGTGATGTAAGAGAAC--TCAACAG--CAGTCACAGGTACTCTGCCTTCACTCTAATAATCTGTGATCTAATTGGTAAAATTAGATCAGTATGCAAAACTGTTAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880462 132 + 135778131 TGGTTTGA-AAAACTTCTACTCCATTTCCAGCGTGATGTAAGAGAAC--CCAACAG--CAGTCACAGGTACTCTGCTTTCACTCTAATAATCTGTGATCTAATTGGTAAAATTAGATCAGTATGCAAAACTGTTAGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188265201 129 - 190850796 CGGCTTGA-AAA---CCGACTCCATTTCCAGCGTGATGTAAGGGGAC--CTGGCAG--CAGCCACAGCTACTGTGCTTTCCCTCTCATAATTTGTGATCTAATTGGTAAAGTCAGATCAGTTCGCAAAACTATGAGA i calJac3.chr3 C 0 C 0 s mm10.chr8 84745412 130 - 129401213 TGGTTTTA-ATAACACTTTTTCTGTTTCCAGCATAAGGTAAAGGGAG--TCAAGAG----GTAACCGGCGCCATGCTGTTCTTCACATAAAGTGAGGCTTTATAGGTAAAATTAGAACCCTGGAGGGAAAAACTCCA i mm10.chr8 C 0 C 0 s canFam3.chr16 15749391 130 - 59632846 aaataaaataaaatGCCAACTCTGTTTCCAACTTAAC---AGTGAACAGTGAACTGTTTAGTCACTG----TATGATTTCACTTCAATAACTTGCAATTTAATAGGTAAAATTAGATAAGTACACAAAACCACTAGA i canFam3.chr16 I 345 I 11 a score=15165.000000 s hg38.chr4_KI270785v1_alt 78867 4 + 119912 TGAG s panTro4.chr4 190346181 4 + 193495092 TGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320134 4 + 198332218 TGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111283315 4 + 115148730 TGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181084834 4 + 184069350 TGAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423041 4 + 189454096 TGAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038129 4 + 178775436 TGAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880594 4 + 135778131 TGAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188265330 4 - 190850796 TGAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84745542 4 - 129401213 TCAG i mm10.chr8 C 0 C 0 e canFam3.chr16 15749521 11 - 59632846 I a score=62057.000000 s hg38.chr4_KI270785v1_alt 78871 22 + 119912 -TTAATAGTCAAATGGTAG---AGTT- s panTro4.chr4 190346185 22 + 193495092 -TTAATAGTCAAATGGTAG---AGTT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320138 22 + 198332218 -TTAATAGTCAAATGGTAG---AGTT- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111283319 22 + 115148730 -TTAATAGTCAAATGGTAG---AGTT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181084838 22 + 184069350 -TTACTAGTCAAATGGTAG---AGTT- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423045 22 + 189454096 -TTACTAGTCAAATGGTAG---AGTT- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038133 22 + 178775436 -TTAATAGTCAAATGGTAG---AGTT- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880598 21 + 135778131 -TTAATA-TCAAATGGTAG---AGTT- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188265334 22 - 190850796 -TAAATAGTGAAATGGTAG---AGTT- i calJac3.chr3 C 0 C 0 s mm10.chr8 84745546 22 - 129401213 -GCTCTGACAGGGAAGTTG---AGTT- i mm10.chr8 C 0 C 0 s canFam3.chr16 15749532 27 - 59632846 TTAACTAGTCAAGTGGTGGTTAAATCT i canFam3.chr16 I 11 C 0 a score=266759.000000 s hg38.chr4_KI270785v1_alt 78893 110 + 119912 TTAAAGACTCCTAGAT-CCGGTGGTTCTATTTTGTTACACGTCTTCTAGG----AAGCTTAGAAGATTGCTTT--GT-TTGGTTGATTCACTACC-TGCTGCATCTTTAGCCTTGACTT s panTro4.chr4 190346207 110 + 193495092 TTAAAGACTCCTAGAT-CCGGTGGTTCTATTTTGTTACACGTCTTCTAGG----AAGCTTAGAAGATTGCTTT--GT-TTGGTTGATTCACTACC-TGCTGCATCTTTAGCCTTGACTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320160 109 + 198332218 TTAAAGACTCCTGGAT--CGGTGGTTCTATTTTGTTACACATCTTCTAGG----AAGCTTAGAAGATTGCTTT--GT-TTGGTTGATTCACTACC-TGCTGCATCTTTAGCCTTGACTT i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181084860 110 + 184069350 TTAAAGACTCCTAGAT-CCGGTGGTTCAATTTTGTTACACATCTTCTAGG----AAGCTTAGAAGACTATTTT--GT-TTGGTTGATTCACTACC-TGTTGCATCTTTAGCCTTGACTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423067 110 + 189454096 TTAAAGACTCCTAGAT-CCGGTGGTTCAATTTTGTTACACATCTTCTAGG----AAGCTTAGAAGACTATTTT--GT-TTGGTTGATTCACTACC-TGTTGCATCTTTAGCCTTGACTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038155 110 + 178775436 TTAAAGACTCCTAGAT-CCGGTGGTTCAATTTTGTTACACATCTTCTAGG----AAGCTTAGAAGACTGCTTT--GG-TTGGTTGATTCACTACC-TGTTGCATCTTTAGCCTTGACTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880619 110 + 135778131 TTAAAGACTCCTAGAT-CCGGTGGTTCAATTTTGTTACACATCTTCCAGG----AAGCTTAGAAGACTGCTTT--GT-TTGGTTGATTCACTACC-TGTTGCATCTTTAGCCTTGACTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188265356 109 - 190850796 TTAAAGGCTCCTAGAG-CCAGTGGCTCCATTTTGTCGCACATTCTCTAGG----ACTCTTAGAGGATTGCTTT--GT-TCCCTTGATTCACTGCC--GTTGGGTCTTCAGCCTTGACTT i calJac3.chr3 C 0 I 343 s mm10.chr8 84745568 74 - 129401213 -------------------------------TTGTTCTAAATCTCATGGACCGCCCGCCCAGGAGACTGCTCTGGGT-TGGCTCCATTCACTTCC-TGCTGCATCTC------------ i mm10.chr8 C 0 C 0 s canFam3.chr16 15749559 103 - 59632846 TTGAAGA---ATAAATGTCAGACATTCTATTTTGTTTTATGTCCTTTAGG----AAGCTCAGA------CTTT--GTATTTACCAATTCATTACCCTGTTGAATCTTTGG-CTTGACTT i canFam3.chr16 C 0 C 0 e nomLeu3.chr7b 111283341 0 + 115148730 C a score=470850.000000 s hg38.chr4_KI270785v1_alt 79003 207 + 119912 AATAATGAAGTAAAAA--TAATAAAACAAAAGACAGTAACAAAGTCAACAGAAAATCCTCTCTCCCAA----ATAAACC----------caacaacaacaacaaaaaacaaAGTACTCAGACAAATAGCTGGGGGAGATTTTTAGAAATTGAGAGTTTTTTGAACATGTAATTAAATTTAATTTAGTTTTTAAAAAACCTTTT-AA-----------------AA--CACTTCAATG-----------------------------------------GGCAG-----------G s panTro4.chr4 190346317 208 + 193495092 AATAATGAAGTAAAAA--TAATAAAACAAAAGACAATAACAAAGTCAACAGAAAATCCTCTCTCCCAA----ATAAACC----------CAACAACAACAACAACAAACGAAGTACTCAGACAAATAGCTGGGGGAGATTTTTAGAAATTGAGAGTTTTTTGAACATGtaattaaatttaatttagtttttaaaaaaCCTTTTAAA-----------------AA--CACTTCAATG-----------------------------------------GGCAG-----------G i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320269 208 + 198332218 AATAATGAAGTAAAAA--TAATAAAACAAAAGACAGTAACAAAGTCAACAGACAATCCTCTCTCCCAA----ATAAACC----------CAACAACAACAACAAAAAACAAAGTACTCAGACAAATAGCTGTGGGAGATTTTTAGAAATTGAGAGTTTTTTGAACATGtaattaaatttaatttagtttttaaaaaaaCCTTTTAA-----------------AA--CACTTCAATG-----------------------------------------GGCAG-----------G i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181084970 206 + 184069350 AATAATGAAGTAAAAA--TAATAAAACAAAAGACAATAACAAAGTCAACAGACAATCCTTTCTCCCAA----ATAAACC-------CAACAACAACAACAACAAAAAACAAAGTACT----CAAATAGCTGTGAAGAATTTTTAGAAAGTGGGAGTTTTTTGAACATGTAATTAAATTTAATTTAGTTTTTAAAAGACCTTTT-AA-----------------AA--CATTTCAATG-----------------------------------------GGCAA-----------A i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423177 206 + 189454096 AATAATGAAGTAAAAA--TAATAAAACAAAAGACAATAACAAAGTCAACAGACAATCCTTTCTCCCAA----ATAAACC-------caacaacaacaacaacaaaaaacaaAGTACT----CAAATAGCTGTGAAGAATTTTTAGAAAGTGGGAGTTTTTTGAACATGTAATTAAATTTAATTTAGTTTTTAAAAGACCTTTT-AA-----------------AA--CATTTCAATG-----------------------------------------GGCAA-----------A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038265 205 + 178775436 aataatgaagtaaaaa--taataaaacaaaagacaataacaaagtcaacagacaatcctttctcccaa----ataaacc-------caacaacaacaacaacaaaaaacaaagtact----CAAATAGCTGTGAAGAATTTTTAGAAAGTGGGAGTTTTTTGAAcatgtaattaaatttaa-ttagtttttaaaagacctttt-aa-----------------aa--catttcaatg-----------------------------------------gGCAA-----------A i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880729 209 + 135778131 AATAATGAATTAAAAA--TAATAAAACAAAAGACAATAACAAAATCAACAGACAATCCTTTCTCCCGA----ATAAACCcaa----caacaacaacaacaacaaaaaacaaAGTACT----CAAACAGCTGTGAAGGATTTTTAGAAAGTGGGAGTTTTTTGAACATGTAATTAAATTTAATTTAGTTTTTAAAAGACCTTTT-AA-----------------AA--CATTTCAATA-----------------------------------------GGCAA-----------A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188265808 249 - 190850796 aataaTGAAGTAAAAA--TGATAAAACAAAAGCGAATAACAAAGTGAAC----AATCCGCTCTCCCAA----ATAAACC----------AAGCAACAACAACAAAAACCAAAGTACTCAGACAAACAGCTGTGGGGGATTTTTAGAAACTGAGAG-GTTTTGAACATGTAATTAAAT-----TTAGTTTTAAAAAGACTTTTC-AA-----------------AA--CATTTCAATGACTTCGCTCTAAAAAATAAACATAGAACTATCAGATTACACAGCAATTTTTAATTGGG i calJac3.chr3 I 343 C 0 s mm10.chr8 84745642 184 - 129401213 AGCAGTTAAATAAAAAAGAAATCGAGCAATAAGCAA-AGCAGTGAGAACA---TGTCCTTTCTCTCCC----CTGTCCC-------------------------------------T----------GCTGCGGGGTACTTTTAGAAA-TGTAAACCTTGTGGTCATATGATTGAATCTAACTTAACTTCTAAAAGACCACTA-AACAAAACAGAACAAAAAGAA--CAACTCAGTG-----------------------------------------TGCAG-----------G i mm10.chr8 C 0 I 129 s canFam3.chr16 15749662 219 - 59632846 AAAAATTAAGCaaaaa-ttaataaaaaaaattttaaGACCGAAGAAGGATGAGTCTCCTGCCACCCACTGTTAAAAACCAAAAAATCTACAACAATGATAATAAAAAGCAAAGTAGT----CAAATAATCATGGAACATTTTTTGCAATTGAGAG-TTTCTGGATATGtaattaaatttaacttaattttaaaaatatactta-aa-----------------aaGTAATCTCAATG-----------------------------------------GGCAG-----------A i canFam3.chr16 C 0 C 0 e nomLeu3.chr7b 111283341 0 + 115148730 C a score=93720.000000 s hg38.chr4_KI270785v1_alt 79210 33 + 119912 GCCttttttaattgaggtgaaattcacataaca s panTro4.chr4 190346525 33 + 193495092 GCCttttttaattgaggtgaaattcacataaca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320477 33 + 198332218 GCCttttttaattgaggtgaaattcacataaca i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181085176 33 + 184069350 GCCttttttaattgaggtgaaattcacataaca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423383 33 + 189454096 GCCttttttaattgaggtgaaattcacataaca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038470 33 + 178775436 GCcttttttaattgaggtgaaattcacataaca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880938 33 + 135778131 GCCttttttaattgagatgaaatttacataaca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188266057 33 - 190850796 GCAtttttaaattgaggtgaaattcacataaca i calJac3.chr3 C 0 C 0 s canFam3.chr16 15749881 33 - 59632846 TTCtttttatattgaagtgatgtccacatcaca i canFam3.chr16 C 0 C 0 e mm10.chr8 84745826 129 - 129401213 I e nomLeu3.chr7b 111283341 0 + 115148730 C a score=262479.000000 s hg38.chr4_KI270785v1_alt 79243 87 + 119912 taaaattaactattttgatgtgtaca---------------aatgtattcacaatgttgtggaac----cataacctttacccagttccag---aacattttcatcaac s panTro4.chr4 190346558 101 + 193495092 taaaattaactattttgatgtgtacaattcagtgg-gatttagtgtattcacagtgttgtggaac----cataacctttacccagttccag---aacattttcatcaac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320510 101 + 198332218 taaaattaactattttgatatgtacaattcagtgg-gatttagtgtgttcacaatgttgtggaac----cataacctttacccagttccaa---aacattttcatcaac i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181085209 101 + 184069350 taaaattaactattttgatgtgtacaattcagtgg-gatttagtgtattcacaatgttgtggaac----cataacctttacccagttccaa---aacatttgattcaac i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423416 101 + 189454096 taaaattaactattttgatgtgtacaattcagtgg-gatttagtgtattcacaatgttgtggaac----cataacctttacccagttccaa---aacattttcatcaac i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038503 105 + 178775436 taaaattaactatcttgatgtgtacaattcagtgg-gatttagtgtattcacaatgttgtgaaaCCATACATAAcctttacccagttccaa---aacattttcatcaac i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132880971 101 + 135778131 taaaattaactattttgatgtgtacaattcagtgg-gatttagtgtattcacaatgttgtggaac----cataacctttacccagttccaa---aacattttcatcaac i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188266090 101 - 190850796 taaaattaactattttgatgagtacaattcagtga-gatttagtgtattcacagtgctgtacaac----catcatctttatccaggtccaa---aacattttcatcaac i calJac3.chr3 C 0 C 0 s mm10.chr8 84745955 96 - 129401213 TAAGATGAACTGTTTTCCTATCCATGCCCTAGCAGTGTTTTGACGCCTTTGCTCTGCTGGAATAG----C---------ACCTAGTTCCTGCGCAGCGCCGCCATCAGC i mm10.chr8 I 129 C 0 s canFam3.chr16 15749914 97 - 59632846 taaaattaaccattttaatgtatacaattcagtgg-catttagttcactcacgatgttgtgccac----caccccttctgtatagttctaa---aacat----atcagc i canFam3.chr16 C 0 C 0 e nomLeu3.chr7b 111283341 0 + 115148730 C a score=2268437.000000 s hg38.chr4_KI270785v1_alt 79330 743 + 119912 -ccaaagggg---------------------------------atcc-----------------------------ttttc--------atc-------aaccactaatctgttttctgtctctgtggattttcctactccagacatt---------tagaatcatacaatatatgactttttatgtttgcttcctttcacttaacataatgttttc-----aaggttcagccttgttatagcatgtgtgagtacttcattactttttgcaggtgaat--cattccattgggtagatataccacattttgtttatccatccattcactgatgtaaatttattgatttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatatgtgtttgaatacctgttttcaagtctttgggctacataa-ataagaatggaattgctgggtaatctaatagttccatg-ttaacttttcggggcaaagccaaagtagtatt---------------------------catggtggctgcatc-tttt-------atattgtagc--aat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gtttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatatggtatctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacatcttttcatgtgcttgttg---accatttgtgt--accttcttaggataaatgtctgctcacttccttttccaatctttaaattgcattgtttgtctgttt----gttgttgaactgtgg--------------tgctttaa-----------------atatatctatctatc-tatctatatacatat-----t s panTro4.chr4 190346659 739 + 193495092 -ccaaagggg---------------------------------atcc-----------------------------ttttc--------atc-------aaccactaatctgttttctgtctctgtggattttcctgttccagacatt---------tagaatcatacaatatatgactttttatgtctgcttcctttcacttaacataatgttttc-----aaggttcagccttgttatagcatgtgtgagtacttcattactttttgcagttgaat--cattccattgggtagatatacaacattttgtttatccatccattcactgatgtaaatttattgatttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatacgtgtttgaatacctgttttcaagtctttgggctacataa-ataagaatggaattgctgggtaatctaatagttccatg-ttaacttttcggggcaaagccaaagtagtatt---------------------------catggtggctgcatc-tttt-------acattgtagc--aat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gtttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatatggtatctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacatcttttcatgtgcttgttg---accatttgtgt--accttgttaggataaatgtctgctcacttccttttcctatctttaaattgcattgtttgtctgttt----gttgttgaattgtgg--------------tgctttaa-----------------atatatctatctatc-tatctat----atat-----t i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195320611 761 + 198332218 -ccaaagggg---------------------------------atcc-----------------------------ttttc--------atc-------aaccactaatctgttttctgtctctgtggattttcctacgccagacatt---------tagaatcatacaatatatgactttttatgtctgcttcctttcacttaacataatgttttc-----aagattcagccttgttatagcatgtatgactacttcattactttttgcagttgaat--cattctgttgggtagatataccacattttgtttatccatccattcactgatgtaaatttattgatttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatacgtgtttgaatacctgttttcaagtctttgggctacataa-ataggaatggaattgctgggtaatctgatagttccatg-ttaacttttcagggcaaagccaaagtagtgtt---------------------------catggtggctgcatc-tttt-------acattgtagc--aat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gtttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgcaatatggtatctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacatcttttcatgtgcttgttg---atcatttgtgt--accttcttaggataaatgtctgctcacttccttttccaatctttaaattgcattgtttgtctgttt----gttgttgaattgtgg--------------tgctttaaatcc-atctatctatctatgtatctatctatc-tatctatctatctat---TAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111283341 728 + 115148730 -CCAAAGGGG---------------------------------ATCC-----------------------------TTTTC--------ATc-------aaccactaatctgttttctgtctctgtggattttcctattccaggcatt---------tagaatcatacaatatatgactttttatgtctgcttcctttcacttaacataatgttttc-----aaggttcagccttgttgtagcatgtatgagtacttcattactttttgcagttgaat--cattccattgggtagatataccacattttgtttatccatccattcattgatgggaatttattga-ttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatacgtgtttgaatacctgttttcaagtctttgggctacataa-ataggaatggaattgctgggtaatctgacagttccatg-ttaacttttcagggcaaagccaaagtattatt---------------------------catggtggctgcatc-tttt-------acattgtagc--aat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gtttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatatggtgtctcattatg--gtttcaatttgcatttccctagtgactgatgattttgaacatcttttcatgtgcttgttg---accatttgtgt--accttcttaggataaatgtctgctcacgtccttttccagtctttaaattgcattgtttgtctgttt----gttgttgaattgtGG--------------TGCTTTAA-----------------AAAAatatatat---------------atat-----t i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181085310 752 + 184069350 -ccaagggag---------------------------------atcc-----------------------------ttttc--------ata-------aactactaatctgttttctgtctctgtggatttccctattccagacatt---------tagaatcatacaatatataactttttatgtctgattcctttcagttaac---atgttttc-----aaggttcagccttgttatagcatgtatgagtacttcattcctttttgcagctgaataatattccattgtgtagctataccacattttgtttatccatccattcactgatggaaatttatttatttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatatgtgtttgaatacctgttttcaagtctttgcgctacataa-ataggaatggaattgctaagtagtctgatagttctatg-ttaacttttcaggacaaagccaaagtattatt---------------------------catggtgactgcatc-tttt-------acattgtagcaaaat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gcttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatacgatgtctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacatcttttcatgtgcttgttg---atcatttgtgt--accttcttaggataaatgtctgttcaagtccttttccaatctttaaattgca----ttgtttgttt----tttgttgaattgtgg--------------TGCTTTTAAAAA-at----------atatatatatatattacacatatagatatatatacgt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186423517 753 + 189454096 -ccaagggag---------------------------------atcc-----------------------------ttttc--------ata-------aactactaatctgttttctgtctctgtggatttccctattccagacatt---------tagaatcatacaatatataactttttatgtctgattcctttcagttaac---atgttttc-----aaggttcagccttgttatagcatgtatgagtacttcattcctttttgcagctgaataatattccattgtgtagctataccacattttgtttatccatccattcactgatggaaatttatttatttttcaccttttggttatt----tgttaatagtgctaatatgaacattggtgtacagatatgtgtttgaatacctgttttcaagtctttgtgctacataa-ataggaatggaattgctaagtagtctgatagttctatg-ttaacttttcaggacaaagccaaagtattatt---------------------------catggtgactgcatc-tttt-------acattgtagcaaaat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gcttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatacggtgtctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacgtcttttcatgtgcttgttg---atcatttgtgt--accttcttaggataaatgtctgttcaagtcattttccaatctttaaattgca----ttgtttgttt----tttgttgaattgtgg--------------TGCTTTAAAAAatat----------atatatatatatattacacgtatagatatatatacgt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176038608 752 + 178775436 -ctaCAGGAG---------------------------------ATCC-----------------------------TTTTC--------ATA-------AActactaatctgttttctgtctctgtggattttcCTATTCCAGACAtt---------tagaatcatacaatatataacTTTTTATGTCTGATTCCTTTCAGTtaac---atgttttc-----aaggttcagccTTGTTATAGCATGTAtgagtacttcattcctttttgcagctgaataatattccattgtgtagctataccacattttgtttatccatccattcactgatggaaatttatttatttttcaccttttggTTATT----TGTTAATAGTGCTAatatgaacattggtgtacagaTATGtgtttgaatacctgttttcaaGTCTTTGCGCTACATAa-ataggaatggaattgctaagTAGTCTGATAGTTCTATG-TTAACTTTTCAGGACAAAGCCAAAGTATTATT---------------------------CATGGTGACTGCATC-TTTT-------ACATTGTAGCAAAAT-ACACAAGGCTTC-CAATTTCTcaacatcctcaccagcacttgttatttca--------------------gcttttt-----------------aaa----aaatta-------------------------------------tagccacCTTA------------------------------------------------GTGGATGTGATATGGTGTCTCAttatg--gtttcaatttgcatttccctagtgactaatgatTTTGAacgtcttttcatgtgcttgttg---atCATTTGTGT--ACCTTCTTAggataaatgtctgttcaagtccttttcCAATCTTTAAATTGcattatttgtctgttt----gttgttgaattgtgg--------------tgctttaaaa---------------atatatatatatattacatgtatagatatatatacat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132881072 751 + 135778131 -ccaaaggag---------------------------------atcc-----------------------------ttttc--------ata-------aaccactaatctgttttctgtctctgtggattttcctattccagacatt---------tagaatcatacaatatataactttttatgtctgattcctttcagttaac---atgttttc-----aaggttcagccttgttatagcatgtatgagtacttcattcctttttgcagctgaataacattgcattgtgtagctataccacattttgtttatccatccattcactgatggaaatttatttatttttcaccatttggctatt----tgttaatagtgctaatctgaacattggtgtacagatatgtgtttgaatacctgttttcaagtctttgcgctacataa-ataggaatggaattgctaagtagtctgatagttctatg-ttaacttttcaggacaaagccaaagtattatt---------------------------catgatgactgcatc-tttt-------acattgtagcaaaat-acacaaggcttc-caatttctcaacatcctcaccagcacttgttatttca--------------------gcttttt-----------------aaa----aaatta-------------------------------------tagccacctta------------------------------------------------gtggatgtgatatggtatctcattatg--gtttcaatttgcatttccctagtgactaatgattttgaacgtcttttcatgtgcttgttg---atcatttgtgt--atcttcttaggataaatgtctgttcaagtccttttccgatctttaaattgcattgtttgtctgttt----gttgttgaattgtgg--------------TGCTTTAAAAAa----------------tatgtatatattacatgtatagatatatatacgt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188266191 673 - 190850796 ------------------------------------------------------------------------------------------------------tactaatctgttt----tctttgtggattttcctattccagacatt---------tagaatcatacaatatatgactttataggtttgcttcctttcaccta-----atgttttc-----aaggttcagctttg---taggatgtatgagcacctcattcctctttatagctgaataatattccattgtgtagatataccacattttgtttatccatccattcactgaagga-----atttatttttcactgcttggttatg----tgttaatagtggtaatatgaacactggtgtacag--------------acctgttttcaagtctttgggctacatac-ataggaatggaattgctgggtaatctgatagttc--tg-tttactttttagggcaaagctgaagtattatt---------------------------tatcgtggctgcatc-tttt-------acattgcagc--aat-atacaaggcttc-caatttctcagcatcctcaccaacacttgttatttca--------------------gtttttt-----------------ttaatttaagtta-------------------------------------tagccacttta------------------------------------------------gtggatgtgatgtggtatctcattacg--gtttccgtttgcacttccctagtgactaatgattttgaacatcctttcgtgtgcttgctg---accatttgtgt--accttcttaggataaaagtctgctcaagtcctttttcagtctttaaattgga----ttgtctgttt----gctgttgaattgtGA--------------TACTTTAA-----------------AAACATATATGTGTG---------------------T i calJac3.chr3 C 0 C 0 s mm10.chr8 84746051 878 - 129401213 -TCAAAGGAG---------------------------------ACCCACGGAAACAGTTCTTCTCTGCTGGGaccgtttccactctgtgatg-------agcctcttatgc-ttttctcttactatggatttatttgtttcaaacagttcctgtggatggaaacacgcaacttattatcttttttgtctgcatacttcaactcagtacaaagttttc-----aagggtcatcaatgtta---cgcgtatcaggacttcattctgtttcacaggtcaat-atattccatcgtctagatattacacatcctgcttatacatctgttcagtaaagac---------atccctcccattttggttgttattatttttataatgcaattatgaacatttctgtCTAATT--------------CTATTTTGGGGAGTGGGGTGAGTATAGCATAGGAATGAAATTAC-AGATAACAGAGTAATCATATA-TTGAAATTTTGGGATAAA-CCCCAGTATTTTC--------------------------------TGGCTATACC-ACTTTGTATAAACAACGTAAA--AACAACATATTACTTTACAATTTTTCAAAGGCTTCTCCGGTATTTGTTGTTTCAAGGTTAAGGTATTTTTGtttgctttttcatatagaatcttcctataa----agatcagagtggcctcaattcccagaatgtggtctctcttcctcagcctccttacaggcaatatcaccaggcttagctCTTATTTGTTGATACagctatgctgtaggcaagacatgctatgtcactgtgctttttttatttgcatcttcccactaacaaatgatttgggatttttttccccctgcttgttttcccccatttgta------ttttgagggaaaaagtccgccccagttcttttcc-----ttaagttgga----ttgccttttt----gttgttgagttgtaag-----------TTTTCCTGAA-----------------AATCGTATTTGCAGT----------GAATAT-----T i mm10.chr8 C 0 C 0 s canFam3.chr16 15750011 802 - 59632846 ctcaagggagggcccatactcttaagctgtccctctgaacactaccc-----------------------------ttctc--------acagcctgacaaacactggtctgtagtctgtctctatgcatttaccccgtccagacatttcatataattagaatcatacattgtgtgaccttttgtatctg--tacattcacttagcattatgctttcattcaaagattcattgagattatagcatgtttcagtatttctttcctttttatggctgaataatgttccattgtatggataaacaatattttgtttatccatttg-tcattgatg-atgtttgggtttttcctaccttttagttat-----tatgaatagtgatgctatgaagattcacatacaaatacttgtttggatgtctgttttcaagtctttcggatacatac-ctgggagtggaatttccaggtaatctggtaattctatatttaacttttgagggaaaagtcaagctttttttttttttttttttttttttttttttttttactgtggctgcaccatctt-------acataccaat--act-gtgtgaagc-tc-taatttttcaacattctctctaatacttataatttca-----------------------tttt-----------------tca----aaatta-------------------------------------ttgggt-----------------------------------------------------atggatatgaagtaataccttatcatg--gttt-gacttgtattcccctgataactagcgattttaaccattttctcat-------ttt---gccatttgtgttacctttttttggagacatgcctattcaggccccttttccat-tttaagtggga----ttgtctttttttaaattgttgagttgtaagagtttctttttttttttttta-----------------atatatatatt-------------------------- i canFam3.chr16 C 0 I 1188 a score=59758.000000 s hg38.chr4_KI270785v1_alt 80073 36 + 119912 atatttatatat--atacat------------aGAG---AGAGagaattttct---------- s panTro4.chr4 190347398 36 + 193495092 atatttatatat--atacat------------aGAG---AGAGagaattttct---------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195321372 36 + 198332218 ATATATATATAT--ATACAT------------AGAG---AGAGagaattttct---------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111284069 38 + 115148730 atatttatatatacacacat------------aGAG---AGAGagaattttct---------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181086062 42 + 184069350 atatgtatatgt--atacat------aCCTAGAGAG---AGAGagaattttct---------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186424270 44 + 189454096 atatgtatatGC--GCACAT------ACATAGAGAG-ATAGAGagaattttct---------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176039360 50 + 178775436 atatatatacac--acacacacagagacagagagag-agagagagaattttct---------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132881823 42 + 135778131 atatataCACAC--ACACAG------AGAGAGAGAG---AGAGagaattttct---------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188266864 39 - 190850796 GTGTGTATATAT--ATATAA---------GAGAGAG---AGAGagtattttct---------- i calJac3.chr3 C 0 C 0 s mm10.chr8 84746929 36 - 129401213 ATAGTTCATCAA--ATACAT------------AATT---TGCAGGAGCTTTCT---------- i mm10.chr8 C 0 I 2229 s canFam3.chr16 15752001 49 - 59632846 aaatttactagt--cctaat------------agatttttttgagaattctttaggatatcct i canFam3.chr16 I 1188 C 0 a score=823918.000000 s hg38.chr4_KI270785v1_alt 80109 271 + 119912 acatacaagattatgtcttctgtaaatacagatagttttacttcttccttttcaattaaaataccctttatttctttttcttggctaattgcccttgcttgaacttcctgtataatgctggataaaagtggtgaaagtagcatccttgtcttattactgatcttggagggaatgctttcagtctttcac---------------------------------------------------------------cgttgagtat-attttagcc------atgggtttttcataaatatacttt--------attatgttgaggatgt--tccattttcttcc-------tggtttatca s panTro4.chr4 190347434 266 + 193495092 acatacaagattgtgtcttctgtaaatacagatagttttacttcttccttttcaattaaaataccctttatttctttttcttggctaattgcccttgcttgaacttccagtataatgctggaaaaaagtggtgaaagtagcatc-----cttattactgatcttagagggaatgctttcagtctttcac---------------------------------------------------------------cgttgagtgt-atgttagcc------atgggtttttcataaatacacttt--------attatgttgaggattt--tccattttcttcc-------tggtttatca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195321408 271 + 198332218 acatacaagattatgtcttctgtaaatacagatagttttacttcttccttttcaattaaaataccctttatttctttttcttggctaattgcccttgcttgaacttccagtataatgctagataaaagtggtgaaagtagcatccttgtcttattactgatcttagagggaatgctttcggtctttcac---------------------------------------------------------------cattgagtat-gtgttggcc------atgagtttttcataaatacacttt--------attatgttgaggatgt--tccattttcttcc-------tggtttatca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111284107 271 + 115148730 acatacaagattatgtcttctgtaaatacagacagttttacttcttccttttcaattaaaatactctttatttatttttcttggctaattgcccttgcttgaacttccagtataatgctggataaaagcggtgaaagtagcatccttgtcttattactgaacttagagggaatgctttcagtctttcac---------------------------------------------------------------cattgagtat-atgttagcc------atgggtttttcataaatacacttt--------attatgttgaggatgt--tccattttcttcc-------tggtttatca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181086104 270 + 184069350 acatataagattatgtgttctgtaaatacagatagttttacttcttcctttccaattaaaatacgctttatttatttttcttgcctaattgcctttgcttgatcttccagtataatgctggataaaag-ggtgaaagtagcatccttgtcttattactgaacttagagggaatgttttcggcctttcat---------------------------------------------------------------cactgagtat-atgttagcc------acgggtttttcctgaatgcacttt--------attacattaaggatgt--tccattttcttcc-------tggtttatca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186424314 271 + 189454096 acatataagattatgtgttctgtaaatacagatagttttacttcttcctttccaattaaaataccctttatttctttttcttgcctaattgcctttgcttgatcttccagtataatgctggataaaagcggtgaaagtagcatccttgtcttattactgaacttagagggaatgttttcggcctttcat---------------------------------------------------------------cactgagtat-atgttagcc------acgggtttttcctgaatgcacttt--------attacattaaggatgt--tccattttcttcc-------tggtttatca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176039410 270 + 178775436 acatataagattatgtgttctgtaaatacagataattttacttctttctttccaattaaaataccttttatttctttttcttggctaATTGCCTTTGCTTGATCTTCCAGTATAATGCTggataaaagtggtgaaagtagcatccttgtcttattacTGAACTTAGA-GGAATGTTTTCGGCCTTTCAT---------------------------------------------------------------CATTGAGTAT-ATGTTAGCC------ATGGGTTTTTCCTGAATGCACTTT--------ATTACGTTAAGGATGT--TCCATTTTATTCC-------TGGTTTATCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132881865 271 + 135778131 acatataagattatgtgttctgtaaatacagatagttttacttcttcctttccaattaaaataccctttatttctttttcttggctaattgcctttgcttgaacttccagtataatgctggataaaagcggtgaaagtagcacccttgtcttattactgaacttagagggaatgttttcggcctttcat---------------------------------------------------------------cactgagtat-atgttagcc------acgggtttttcctgaatgcacttc--------attacgttaaggatgt--tccattttcttcc-------tggtttatcg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188266903 258 - 190850796 acatctaagatt-------------atacagatatttttacctctttctgtccagttaggatgtcctttatttctttctcttggctaattgccctt-cttgaacttccagtgcaaagctggatagaagtggtgaaagtagcatccttgtcttgttactgatcttagagggaaagatttcagtctttcac---------------------------------------------------------------cattgagtataatgttagcc------gtggttttttcataaatacccttt--------gctatgttgaggatat--ttcattttattcc-------tagttcatca i calJac3.chr3 C 0 C 0 s canFam3.chr16 15752050 350 - 59632846 acacttgagattatgttatttgcaagtagaaatagttttacttcttcttttctcatttagatcccttttatttctttttcttgtctaattgccctggctagaacctctagtacaaagctaactagaattggtaaatggggcat------cttattactgaacttaggggcaa-attttcagtcttttacaagttggctgtgcgttcttcataaatgccctttaccgggtcaaggaagtttctttctattctttgttgaatat-gttttatcataaaagattggatttttttaaatgctctttctgtgtcaattgaaatgatcatgtgattccttttattcaactaatgtggtgtatta i canFam3.chr16 C 0 I 431 e mm10.chr8 84746965 2229 - 129401213 I a score=443999.000000 s hg38.chr4_KI270785v1_alt 80380 158 + 119912 tgtgtttttaccatgaaagcatgttgtatattttcaaatgttgtttcagcttcacttgagatgattttgtgttccctccttcattctattaatgtggtgtattatattcgttgtatatgttgaaccacccttgcattcttgggataaatcccaactga s panTro4.chr4 190347700 158 + 193495092 tgtgtttttaccatgaaagcatgttgtatattttcaaatgttgtttcagcttcacttgagatgattatgtgttccccccctcattctattaatgtggtgtattatattcattgtatatgttgaaccacccttgcattcttgggataaatcccaactga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195321679 158 + 198332218 tgtgtttttaccatgaaatcatgttgtatattttcaagtgttgtttcagcttcacttgagatgattatgtgttccccacctcattctattaatgtggtgtattatattcattgtatatgttgaaccacccttgcattcttgggataaatcccaactga i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111284378 158 + 115148730 tgtgtttttaccatgaaagcatgttgtatattttcaaatgttgtttcagcttcacttgagatgattatgtgttccccccctcattctattaatgtgatgtattatattcattgtatatgttgaaccacccttgcattcttgggataaatcccaattga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181086374 152 + 184069350 tgtgtttttaccatgaaagcatgttgtatatgttcaaatgttgtttcagcttcacttgagatgattatgtgttccccccatcattctattaatgtggcgtattatattcattgtatata------cacccttgtattcttgggataaatcccaattga i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186424585 152 + 189454096 tgtgtttttaccatgaaagcatgttgtatatgttcaaatgttgtttcagcttcacttgagatgattatgtgttccccccatcattctattaatgtggtgtattatattcattgtatata------cacccttgtattcttgggataaatcccaattga i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176039680 152 + 178775436 TGTGTTTTTACCATGAAAGCATGTTGTACACGTTCAGATGTTGTTTCAGCTTCACTTGAGATGATTATGTGTTCCCCCCatcattctattaatgtggtgTATTATATTCATTGTATATA------CACCCTTGTATTCTTGGGATAAATCCCaattga i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132882136 148 + 135778131 tgtgtttttaccatgaaagcatgttgtatatgttcaaatgttgtttcagcttcacttgagatgattatgtgtt-cccccatcattctattaa---ggtgtattatattcattgtatata------tacccttgtattcttgggataaatcccaattga i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188267161 156 - 190850796 tgtgtttttatcatgaaagcatactggatattttcaaatgctgcttcagcttcattggagataatt-tgtgttcccctcc-cattctattaatgtggtgtattacattgattatatatattgaatcacccttgcattcttgggataaatcccaattga i calJac3.chr3 C 0 C 0 e canFam3.chr16 15752400 431 - 59632846 I e mm10.chr8 84746965 2229 - 129401213 I a score=1200678.000000 s hg38.chr4_KI270785v1_alt 80538 366 + 119912 tcatgatgtataattcttttaa-catgctacttcatttggtttgctagt-cttttgttgcagatttttgcatttatatttagtagggatatctatctatagttttcttttcttatgtgctgcctt----tggctttggtgtcagggtaattctggcctcatagcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaagattggtgttacttcttttttaaatgcttcatagtatttagg-gtgaaaccatctTTAGTACTTTACTTTTTAAAAATGGTAACTATGGACAGTTAAACCTAAAGTATCAGAATTCAAATGGAAATGTTTTAAATTTGGCAATAACAAAAAATTAT s panTro4.chr4 190347858 366 + 193495092 tcatgatgtataattcttttaa-tatgctacttcatttggtttgctagt-cttttgttgcggatttttgcatttgtatttagtagggatatctatctatagttttcttttcttatgtgctgcctt----tggctttggtgtcagggtaattctggcctcatagcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaagattggtgttacttcttttttaaatgcttcatagtatttagc-gtgaaaccatctTTAGTACTTTACTTTTTAAAAATGGTAACTATGGACAATTAAACCTAAAGTATCAGAATTCAAATGGAAATGTTTTAAATTTGGCAATAACAAAAAATTAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195321837 366 + 198332218 tcatgatgtataattcttttaa-catgctacttcatttggtttgctagt-tttttgttgcggatttttgcatttatatttagtagggatatctatctatagttttctttttttatgtgctgcctt----tggctttggtgtcagggtaattctggcctcatagcttgatttaagaggtgttattttcttttctaattttatggaagagtttaagaaagattggtgttacttcttttttaaatgtttcatagtatttagt-gtgaaaccatctTTAGTACTTTACTTTTTAAAAATGGTAACTATGGACAATTAAACCTAAAGTATCAGAATTCAAATGGAAATATTTTAAATTTGGCAATAACAAAAAATTAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111284536 366 + 115148730 tcatgatgtataattcttttaa-catgctacttcatttggtttgctagt-cttttgttgaggatttttgcatttatatttagtagggatatctatctatagttttctttttttatgtgctgcctt----tcgcttcggtgtcagggtaattctggcctcatggcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaaggttcatgttacttcttttttaaatgcttcatagtacttagt-gtgaaaccatctTTAGTACTTTACTTTTTAAAAATGGTAACTATGGACAATTAAACCTAAAGTATCAGAATTCAAATGGAAATGTTTTAAATTTGGCAATAACAACAAATTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181086526 363 + 184069350 tcatggtg--taattcttttaa-catgctacttcatttggtttactagt-cttttgttgtggatttttgcatttatatttagtagggatatctatttatagttttc-ttttttatgtgctgcctt----tggctttggtgtcagggcaattctggcctcctagcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaacattgctgttccttcttttttaaatacttcacagtattttgt-gtgaaaccatctttagtacttgacttttcAAAAATGGTAAATATGGACAATTAAACCTAAAGTATCAGAATTCAGATGGAAATGTTTTAAATTTGGCAATAACAAAAAATTAT i rheMac3.chr5 C 0 M 649 s macFas5.chr5 186424737 363 + 189454096 tcatggtg--taattcttttaa-catgctacttcatttggtttactagt-cttttgttgtggatttttgcatttatatttagtagggatatctatttatagttttc-ttttttatgtgctgcctt----tggctttggtgtcagggcaattctggcctcctagcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaacattgctgttccttcttttttaaatacttcatagtattttgt-gtgaaaccatctttagtacttgacttttcAAAAATGGTAAATATGGACAATTAAACCTAAAGTATCAGAATTCAGATGGAAATGTTTTAAATTTGGCAATAACAAAAAATTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176039832 366 + 178775436 tcatggtgtataattcttttaa-cATGCTACTTCATTTGGTTTACTAGT-Cttttgttgtggatttttgcgtttatatttagtagggatatctatttatagttttctttttttatgtgctgcctt----tggctttggtgtcagggtaattcTGGCCTCCTAGCTTGATTTAAGaggtgttattttcttttctaattttctggaagagtttaaGAAACATTGgtgttccttcttttttaaatactTCATAGTATTTTGT-GTGAAACCATCTTTAGTACTTGACTTttcaaaaatggtaaatatggACAATTAAACCTAAAGTATCAGAATTcagatggaaatgttttaaatttggcaataacaaaaaattat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132882284 366 + 135778131 tcatggtgtataattcttttaa-catactacttcatttggtttactagt-cttttgttgcagatttttgcatttatatttagtagggatatctatttatagttttctttttttatgtgctgcctt----tggctttggtgtcagggtaattctggcctcctagcttgatttaagaggtgttattttcttttctaattttctggaagagtttaagaaacattggtgttccttcttttttaaatacttcatagtattttgt-gtgaaaccatctTTAGTATTTGACTTTTCAAAAATGGTAAATATGGACAATTAAACCTAAAGTATCAGAATTCAGATGGAAATGTTTTAAATTTGGCAATAACAAAAAATTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188267317 343 - 190850796 tcatggtgtataattcttttaa-catgctactttgtttggtttgctagtgtttttgttgtgaatttttgcatttatatttagaaaagatctctatctgtagcttccttttt---tatgctagctt----tggcttctgtatcagggtaattctggcctcatagcttgatttaagatgtgttattttcttttctatttttttggaagagtttaacaaagattggtgtttcttcttttgtaaatg-ttcatagtattcagt-gtgaaaccatctTTAGTACTTTACTCTTAAAAAATAGTAAATATGGAC----------AAAGATTCAGAATTCAGATGAAAATGTTTT----------ATAGCAAAAAATTAT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15752831 365 - 59632846 ccccaatatataatccttttaagtatgctgctggattcagtctgatagt-attctgttgtgga-ttttacatctgtgttcatgaggcatattgatctgttgttttctttctt--tgggatgcctttgtctggctttggtatca-ggtaattttgactatatagactgatttatgatgtgttccttcctcatataattttttggaataatttgaaaaaaattggtgctagttcttctttaaatgtttgttagcattcaccagtgaagtcatctTTAGAATTTTACTTTTAAAAGTGGGTAGATGTTGACAATTAAATGTAAGGTATCAAAATTTAGATGGAAATGTTTTAGATTTGGCAAT---AAAAATTTAT i canFam3.chr16 I 431 C 0 e mm10.chr8 84746965 2229 - 129401213 I a score=346158.000000 s hg38.chr4_KI270785v1_alt 80904 142 + 119912 AAGTTCAAAACATATCTGCCCAAACAATGACT--AATACCACTTCCAAAATTATCTACTTA-ATAGATAGTGAAGGGATATAACATTGTTTTTA-TATTAT-TTCAAGAT-GGGGCAAAAGTTAACTTCTGTTAAGTAAAGTCTACAC s panTro4.chr4 190348224 142 + 193495092 AAGTTCAAAACATATCTGCCCAAACAATGACT--AACACCACTTCCAAAATTATCTACCTA-ACAGATAGTGAAGGGATATAACATTGTTTTTA-TATTAT-TTCAAGAT-GGGGCAAAAGTTAACTTCTGTTAAGTAAAGTCTACCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195322203 134 + 198332218 AAGTTCAAAACATATCTGCCCAAACAATGACT--AATACCACTTCCAAAATTATCTACTTA-ATAGATAGTGAAGGGATATAACATTGTTTTTA---------TCAAGAT-GGGGCAAAAGTTAACTTCTATTAA-TAAAGTCTACAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111284902 142 + 115148730 AAGTTCAAAACATATCTGCCCAAACAATGACT--AATACCACTTCCAAAATTATCTACTTA-ATAGTTAGTGAAGGGATATAACATTGTTTTTA-TATTAT-TTCAAGAT-GGGGCAAAAGTTAACTTCTATTAAGTAAAGTCTACAC i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186425100 142 + 189454096 AAGTTCAAAACATATCTACCCAAACAATGACT--AATACCACTTCCAAAATTATCTCCTTA-ATAGATAGTGAAGGGATATAACATTGTTTTTA-TATCAT-TTCAAGAT-GGGACAAAAGTTAACTTCCATTAAGTAAAGTCTACAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176040198 141 + 178775436 aagttCAAAACATATCTACCCAAACAATGACT--AATACCacttccaaaattatctcctta-atAGATAGTGAAGGgatataa-attgttttta-tatcaT-TTCAAGAT-GGGACAAAAGTTAACGTCCATTAAGTAAAGTCTACAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132882650 142 + 135778131 AAGTTCCAAACATATCTGCCCAAACAATGACT--AATACCACTTCCAAAATTATCTCCTTA-ATAGATAGTGAAGGGATATAACATTGTTTTTA-TGCCAT-TTCAAGAT-GGGGCAAAAGTTAACTTCCATTAAGTAAAGTCTACAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188267660 140 - 190850796 AAGTTCAAAACATATCTTTCCAAACAATGGCT--AATACCACTTTCAAAATTATCTACATA-ATAGATAGAGAGGAGGTATAACATCATTTTAA----TAT-TTCAAGATAGGGGTGTAAGTTAACTTCTATTAAGTAAAGTCTACAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15753196 148 - 59632846 AAACACAAAACACATCTGCCAAAATAAAGACCGAGATACCACTTTCaaaattatatatttagaaaaattaaaaaGGGTGATAAAATGATTTTTTGTACCATATCCAAAATATGGATAAAACTTAACTTCAATTAGGTAAACCCTACAT i canFam3.chr16 C 0 C 0 e mm10.chr8 84746965 2229 - 129401213 I e rheMac3.chr5 181086889 649 + 184069350 M a score=535442.000000 s hg38.chr4_KI270785v1_alt 81046 243 + 119912 CTATACAAAATGTTGCTCaatatgttcttgtgtttgatagcatggtagggtgaatatattgaacaatatattgtatttttcaaaatagctagaagagaagatttgaaatgttactgacagaaagaaatgataagtgtttgaggtgatggacatcctaaataccctgacctgatcattacacactccgtgcatgtatcaaaatatgtaccccatcaatatgtgtaagtattatgtatcagtaaa s panTro4.chr4 190348366 243 + 193495092 CTATACAAAATGTTGTTCaatatgttcttgtgtttgatagcatggtagggtgaatatattgaacaatatattgtatttttcaaaatagctagaagagaagatttgaaatgttactgacagaaagaaatgataagtgtttgaggtgatggacatcctaaatcccctgacctgatcattacacactctgtgcatgtatcaaaatacgtaccccatcaatatgtgtaagtattatgtatcagtaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195322337 242 + 198332218 CTATACAAACTGTTGTTTGatatgttctcgtgtttgatagcatggtagggtgaatatattgaacaacatattgtatttttcaaaatagctagaagagaagatttgaaatgttactgacag-aagaaatgataagtgtttgaggtgatggacatcctaaataccctgacctgatcattacacactctgtgcatgtatcaaaatatgtaccccatcaatatgtgtaagtattatgtatcagtaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111285044 243 + 115148730 CTATACAAAATGTTGTTCaatatgttcacgtgtttgatagcatggtagggtgaatatattgaacaccatattgcatttttcaaaatagctagaagagaagatttgaaatgttactgacagaaagaaatgataagtgtttgaggtgatggacatcctaaataccctgacctgatcattacacactctgtgcatgtatcaaaatatgtaccccatcaatatgtgtaagtattatgtatcagtaaa i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186425242 239 + 189454096 CTATACAAAATGTTGTTCaatatgttctcgtatttgatagcgtggtagggtgaatatatttaacaacatattgtatttttcaaaatatctagaag---agatttgaaatgttactgacagaaagaaatgataagtgttttaggtgatggacatcctaaataccctgacctgataattacatgctctgtgcatgtatcaaaatatgtaccccatcaatgtgtataagtattatgtat-agtaaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176040339 239 + 178775436 CTATACAAAATGTTGTTCAATACGTTCTCGTGTTTGATAGCGTGGTAGGGTGAATATATTTAACaacatattgtatttttcaaaatatctagaagagaagatttgaaatgttacTGACAGAAAGAA---ATAAGTGTTTGAGGTAATGGACATCCTAAATACCCTGACCTGATCATTACACGCTCtgtgcatgtatcaaaatatgtaCCCCATCAGTATGTATAAGTATTATGTAt-agtaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132882792 242 + 135778131 CTATACAAAATGTTGTTCaatatgttctcgtgtttgatagcgtgggagggtgaatatatttaacaacatattgtatttttcaaaatatctagaagagaagatttgaaatgttactgacagaaagaaatgataagtgttcgaggtgatggacatcctaaataccctgacctgatcattacatgctctgtgcatgtatcgaaatatgtaccccattaatatgtataagtattatgtac-agtaaa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188267800 228 - 190850796 CTATATAAAATGTTGTTCaataagttctcatgcttgatagcatggtacggtgaatatatttaacaatatattgtatttttcaaaagagctggaagagaagatttgaaatgttcctgagagaaagaaatgacaagtgtttgaggtgatggacgtcctacatgccccaacttgatcactgcacattctgtgcgtgtatcagaata---------------tgtgtaaatattatgcatcaataaa i calJac3.chr3 C 0 C 0 e canFam3.chr16 15753344 0 - 59632846 C e mm10.chr8 84746965 2229 - 129401213 I e rheMac3.chr5 181086889 649 + 184069350 M a score=851375.000000 s hg38.chr4_KI270785v1_alt 81289 330 + 119912 gaataaaaTATGTTGAAAAATGGAGACAATTACCCAAATAAATAGGAATATGATTGAGACATGGGTTGGTATTCTAATGTATTCAGACTATTATCTTA------------ATTCTCCATTTTACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTTCAACTAGAAATAGAGGAATATCTCCAAATAATTTTACAACTTTATTTTCTCTCTTAGACTCATTGTTTTTTC---CACAACATCAGGTTAATGGTT-TAAAAAGCTTTGCACAACTTCTGTTTGGTTAAGATTTTTTATTTTATATACATAGACACACACACATATCTATTAG s panTro4.chr4 190348609 330 + 193495092 gaataaaGTATGTTGAAAAATGGAGACACTTACCCAAATAAATAGGACTATAATTGAGACATGGGTTGGTATTCTAATGTATTCAGAGTATTATCTTA------------ATTCTCCATTTTACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTTCAACTAGAAATAGAGGAATATCTCCAAATAATTTTACAACTTTATTTTCTCTCTTAGACTCATTGTTTTTTC---CACAACATCAGGTTAATGGTT-TAAGAAGCTTTGCACAACTTCTGTTTGGTTAAGATTTTTTCTTTTATATACATAGACACACACACATATCTATTAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195322579 330 + 198332218 gaataaaaTACGTTGAAAAATGGAGACAATTACCCAAATAAATAGGAATATAATTGAGACATGGGTTGGTATTCTAATGTATTCAGACTATTATCTTA------------ATTCTCCATTTTACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTTCAACTAGAAAGAGAGGAATATCTCCAAATAATTTTACAATTTTATTTTCTCTCTTAGACTCATTGTTTTTTC---CACAATATCAGGTTAACGGTT-TAAAAAGCTTTGCACAACTTCTGTTTGGTTAAGATTTTTTATTTTATATACATAGACACACACACATATCTATTAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111285287 330 + 115148730 gaataaaaCATGTTGAAAAATGGAGAAAATTACCCAAATAAATAGGAATATAATTGAGACACAGGTTGGTATTCTAATGTATTCAGACTATTATCTTA------------ATTCTCCATTTTACTTTAACCATATAAGAATAATCTCAGTTACTTTTAGTTGGAAATTTGTTTCAACTAGAGAGAGAGGAATATCTCCAAATAATTTTACAATTTTATTTTCTCTCTTAGACTCATTGTTTTTTC---CACAATATCAGGTTAATGGTT-TAAAAAGCTTTGCACAACTTCTGTTTGGTTGAGATTTTTAATTTTATATACATACACACACACACGTATGTATTAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186425481 330 + 189454096 gaataaaaTATGTTGAAAAATGGAGACAATTACCCAAATAAATAGGAATATAATTGAGAGATGGGTTGATATTCTAACGTATTCAGACTATTATCTTA------------ATTCTCCGTTTCACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTTCAACTAGAAAGAGAAAAATATCTCCAAATAATTTTACAATTTTATTTTCTCTCCTAGACTCATTATTTTTTC---CACAATATCAGGTTAGTGTTT-TAAAAATCTTTGCACAACTTCTGTTTGGTTAAGATTTTTTATTTTATGTACATAGACACACACACATATGTATTAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176040578 330 + 178775436 gaataaaatatgttgaaaaatgGAGACAATTACCCAAATAAATAGGAATATAATTGAGACATGGGTTGATATTCTAACATATTCAGACTATTATCTTA------------ATTCTCCGTTTCACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTTcaactagaaagagaaaaatatctccaaataattttacaattttattttctctcctagaCTCATTATTTTTCC---CACAATATCAGgttagtgttt-taaaaatctttgcacaACTTCTGTTTggttaagattttttattttatgtacatagacacacacacatatgtattag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132883034 330 + 135778131 gaataaaaTATGTTGAAAAATGGAGACAATTACCCAAATAAATAGGAATATAATTGAGACATGGGTTGATAGTCTAACGTATTCAGATTATCATCTTA------------ATTCTCCGTTTCACTTTACCCATATAAAAATAATCTCAGTTACTCTTAGTTGGAAATTTGTTCCAACTAGAAAGAGAAAAATATCTCCAAATAATTTTACAATTTTATTTTCTCTCCTAGACTCATGGTTTTTTC---CACAATATCAGGTTAATGTTT-TAAAAATCTTTGCATAACTTCTGTTTGGTTAAGATTTTTTATTTTATGTCTATAGACACACACACATATGTATTAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188268028 342 - 190850796 gaataaaaTATGTTG-AAAATGGAGACAATTACCCAAAT-AATAGGAATATAATTGAGACATGGGTTGGTGTTCTAATGTATTCAGACTGCTATCTTGTGTCTTCAGACTATTATCCATTTTTCTTTACCCATACAAAAATAATCTCCGTTACTCTTAGTTGGAAATTTGTTTCAGCTAGAAAGAGAAGAATATTTCGAAATCATTTTACAATTTTATTTTCTCACCTAGACTCATTGTTTTTTTTCGCAAAATATCCGGTTAATATTT-TAAAAAGCTTTGCACAGCTTCTGTTTGGTTAAGATTTTT-GTTTTATATACATAGACACACACACGTATGCATTAG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15753344 319 - 59632846 GTATAAAATATTTTTAA------AGGCAATTATTCAAATAAACAGGAATATAACTGAAAAATGAG----TGTTATGGTATGTTCAAACTCTCACTTTG------------ACTCTTCGTTTCA-TTAATCCATATACAAATAGTCAGAATTTCTCTTAGTTGGGAATTTGTTTAAATTAGAAAGAGAAGaatatttacaaataatattaatattttattttCTTTCCTAGGTTCATTATTCTTCT---CA-GATGTCAAGCTAATCTTCAAAAAAATCTTTAAAAAGCTtacatatatatagatattagcaatgtatatatatatacacacacatatatatagtat i canFam3.chr16 C 0 C 0 e mm10.chr8 84746965 2229 - 129401213 I e rheMac3.chr5 181086889 649 + 184069350 M a score=228087.000000 s hg38.chr4_KI270785v1_alt 81619 77 + 119912 --------------TCGATCATTCAGATATACAACTAACTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAATGACCTAG s panTro4.chr4 190348939 77 + 193495092 --------------TCGGTCATTCAGATATACAACTAACTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAATCACCTAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195322909 77 + 198332218 --------------TCCATCATTCAGATATACAACTAACTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAATCACCCAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111285617 77 + 115148730 --------------TCAATCATTCAGATATACAACTAACTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAATCACCTAG i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186425811 74 + 189454096 --------------TAGATCATTCAGATAGACAACCAGCTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAAT---CTAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176040908 74 + 178775436 --------------tAGATCATTCAGATAGACAACCAGCTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-ATATAAAT---CTAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132883364 74 + 135778131 --------------TAGATCATTCAGATAGACAACTAACTAGATTTAAAAATAGTAAGCCATGGTTTATACATCAC-TTATAAAT---CTAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188268370 74 - 190850796 --------------TCGATCATTCAGATATGCAACTAATTAGATTTGAAAATAGTAAGCCATGGTTTATACATCAC-CTATAAAT---CTAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84749194 78 - 129401213 --------------TTGGCCATTCAGATATATGGCTAACTAGATCTAAAAATCGAAAGTCATATTTCACGCTTCACAATATAAATCTCCTGT i mm10.chr8 I 2229 C 0 s canFam3.chr16 15753663 91 - 59632846 gcatatatatTATAGTATTTATTCAGATATACAACTAACTGGATTTGAAGATATTAAGGCATAGTTTATACATCAT-ATATAAATGTCTTAG i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181086889 649 + 184069350 M a score=276676.000000 s hg38.chr4_KI270785v1_alt 81696 71 + 119912 ATACCAGTAGTGACATTATCATCATGA---ATATTAGTTCCAGAAAGTATAGATCAGAGAATAT--TTGGGAAGAG s panTro4.chr4 190349016 71 + 193495092 ATACCAGTAGTGACATTATCATTATGA---ATATTAGTTCCAGAAAGTATAGATCAGAGAATAT--TTGGGAAGAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195322986 71 + 198332218 ATACCAGTAGTGACATTATCATTGTGA---ATATTAGTTCCAGAAAGTATAGATCAGAGAATAT--TTGGGAAGAG i ponAbe2.chr4 C 0 I 286 s nomLeu3.chr7b 111285694 71 + 115148730 ATGCCAGTAGTGACATTATCATCATGA---ATACTAGTTCCAGAAAGTACAGATCAGAGAATAT--TTGGGAAGAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181087538 71 + 184069350 ATACCAATAGTGATATTATCATCATGA---ATATTAGTTCCAGAAAGTACAGATCAGAGAATAT--TTGGGAAGAC i rheMac3.chr5 M 649 C 0 s macFas5.chr5 186425885 71 + 189454096 ATACCAATAGTGATATTATCATCATGA---ATATTAGTTCCAGAAAGTACAGATCAGAGAATAT--TTGGGAAGAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176040982 71 + 178775436 ATACCAATAGTGACATTATCATCATGA---ATATTAGTTCCAGAAAGTACAGATCAGAGAATAT--TTGGGAAGTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132883438 71 + 135778131 ATACCAATAGTGACATTATCATCATGA---ATATTAGTTCTAGAAAGTACAGATCAGAGAATAT--TTGGGAATTC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188268444 71 - 190850796 ATACCAGTAGTGACATTGTCATCATGA---ATATTATTTCCAGAAGGTATAGATCAGAGAATAT--TTGGGAATGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84749272 75 - 129401213 ATACAAATACTAACATCAGCACCATGA-ACATATTAATTCCAGAAGGTGTAGATCAGACAGTGTGCTCAGAAAGAC i mm10.chr8 C 0 C 0 s canFam3.chr16 15753754 76 - 59632846 ATATCTGAATTGACATCATCATCATAATAAATATTAGTTCCAGAAAGTGTAGGTCAGAGAATGTACTTGGAAAGAC i canFam3.chr16 C 0 C 0 a score=667015.000000 s hg38.chr4_KI270785v1_alt 81767 225 + 119912 AGATCCAAAACAATGTCTGACAAGTTTTTGAGGAATGGGGAATGATGATGAACAGTCATGAAAATAACAGAATTAAATTCCAATTTGTTTTT----CAGTAGAAATGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----AGGCAGGGAGTTGGTGATTTTT-CTACCTCTTGAAATAAGTATACCATACAAAAAGCGCTATT s panTro4.chr4 190349087 225 + 193495092 AGATCCAAAACAATGTCTGACAAGTTTTTGAGGAATGAGGAATGATGATGAACAGTCATGAAAATAACAGAATTGAATACCAATTTGTTTTT----GAGTAGAAATGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----AGGCAGGGAGTTGGTGATTTTT-CTACCTCTTGAAATAAGTATACCATACAAAAAGTGTTATT i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111285765 217 + 115148730 AGATCCAAAACAATGTCTGACAAGTTTTTGAGGAA--------GATGATGAACAGTAATGAAAATAACAGAATTGAATATCAATTTGTTTTT----GAGTACAAATGATGTTAATGTTTAGATAGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----AGGCAGTGAGTTGGTGATTTTT-CTACCTCTTGAAATAAGTATACCATACAAAAAGCGCTATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181087609 213 + 184069350 TGATTCAAAACGATGTCTGACA-----TCGAGGAA-------TGATGATGAACAGTCATGAGAATAACAGAATTGAGTATCAATTTGTTTTT----GAGTAGAAATGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----GGGCAGGGAGTTGGTGATTTTT-CTAACTCTTGAAGTAAGTATACTATACAAAAAGCACTATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186425956 213 + 189454096 TGATTCAAAACGATGTCTGACA-----TCGAGGAA-------TGATGATGAACAGTCATGAGAATAACAGAATTGAGTATCAATTTGTTTTT----GAGTAGAAATGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----GGGCAGGGAGTTGGTGATTTTT-CTAACTCTTGAAGTAAGTATACTATACAAAAAGCACTATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176041053 213 + 178775436 AGATTCAAAACGATGTCTGACA-----TCGAGGAA-------TGATGATGAACAGTCATGAGAATAACAGAATTGAGTATCAATTTGTTTTT----GAGTAGAAATGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACAGTTAAGTACAG----AC----CTTCAG----GGGCAGGGAGTTGGTGATTTTT-CTAACTCTTGAAGTAAGTATACTATACAAAAAGCACTATT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132883509 213 + 135778131 AGATTCAAAACGATGTCTGACA-----TCGAGGAA-------TGATGATGAACAGTCATGAGAATAACAGAATTGAGTATCAATTTGTTTTT----GAGTAGAAACGATGTTAATGTTTAGATGGCTCCTGTCAGCATTAAATACACATTTAAGTACAG----AC----CTTCAG----GGGCAGGGAGTGGGTGATTTTT-CTAACTCTTGAAGTAAGTATACGATACAAAAAGCACTATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188268515 218 - 190850796 AGATTCAAAACAATGTCTGATGAGTTTTTGAGGAA-------TGACGATGAATAGTCATGAGAATAACAGAATTGAATATCAGTTTGTTTTT----GAGTAGAAATGATATTAATGCTTAGATGGTTCCTGTCAGCATTAAAT----AGTTAAGTACAGACCAAC----CTTCAG----AGGCAGGGAGTTGGTGATTTTT-CTATTTCTTGAAATAAGCACACCATACAAAAAGCCCTGTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84749347 221 - 129401213 AGATTAAAAGTAATGTCTGATAAGTCGTTGAGTGA-------TGGTGATGAAGAGCTTTGAGAAT-CCTGAATTGAATATTAATTCATGTTT-----AGAGGAAATGATACTAATGTTTAGATGGCTCCTGTCAGCGTTAGAGAGACAAATCATCACTG----AC----CAACAGTCACAGGCAGAAAGTTGGAGATTTTTATTAACTTTCAAAACAAGTACACTGCACACAAAGTGCTATT i mm10.chr8 C 0 C 0 s canFam3.chr16 15753830 226 - 59632846 ATATGGGAAGTAATGTCTTTCAAATTTTTGAGTGA-------TGATGATGAACAGCCATGAGAATAACAAAATTGAATAGCAATTTGTTTTTGAGTGAGTGGAAATGATATTAATGTTTAGCTGGTTCCTGTCAGCATTAAAGAGATAGATAAGCACAG----ACCAAACTTCAG----AGGCAGGAAGTTGGTAATTTTA-TTACCTCTTGAAGTAAGTATACCATTCAAAAAGCACTATT i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195323057 286 + 198332218 I a score=2421414.000000 s hg38.chr4_KI270785v1_alt 81992 664 + 119912 TTGCCTGCTTGAAATTTCAGAAAGGTAAACACTCTGAATTGGCTTAGTGCTTGGGCTATTGGCAGACCTTTCACAAGAAAAAGTTTTTAGGCAGCGTCTATGTGAATCATACCAGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAGCATTCTATTCACAGTGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttataggcagagttcacataatcactttgaacgcctggcatct----acgcagcaagtgtgcaataaatatttattgaataactaaTCTTACAATGAAGAAGCAGCATGAAC-TGGGAATTACTTTCCATTCCA-GTTC-TGAAGTTTAGACTCATTCTAAGAACTATGAATGCTTACATCTGTGACCTTAATGTACCTAGATTTCAGTTTTCTTGAATTGAGT--TTGACGAGTGTATTTCTG----AAGCCCCTTCTAGCTTCTAAATGTCATGACATGCGTTCAAGATGAGACTTGTGAGTATCTTTTCAACTAAACTCAGTTCTCCAGGTCTTTCACCACCTGTTGTAAAAGGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC s panTro4.chr4 190349312 664 + 193495092 TTGCCTGCTTGAAATTTCAGAAAGGTAAACACTCTGAATTGGCTTAGTGCTTGGGCTATTGGCAGACCTTTCACAAGAAAAAGTTTTTAGGCAGCGTCTATGTGAATCATACCAGCTTCCCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAGCATTCTATTCACAGTGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttataggcagagttcacataatcactttgaatgcctggcatct----atgcagcaagtgtgcaataaatatttattgaataactaaTCTTACAGTGAAGAAGCAGCATGAAC-TGGGAATTGCTTTCCATTCCA-GTTC-TGAAGTTTAGACTCATTCTAAGAACTATGAATGCTTACATCTGTGACCTTAATGTACCTAGATTTCAGTTTTCTTGAATTGAGT--TTGACGAGTGTATTTCTG----AAGCCCCTTCTAGCTTCTAAATGTCATGACATGCGTTCAAGATGAGACTTGTGAGTACCTTTTCAACTAAACTCAGTTCTCAAGGTCTTTCACCACCTGTTGTAAAAGGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195323343 664 + 198332218 TTGCCTGCTTGAAATTTCAGAGAGGTAAACACTCTGAATTGGCTTAGTGCTTGGGCTATTGGCAGACCTTTCACAAGAAAAAGTTTTTAGACAGCGTCTATGTGAATCATACCAGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAACATTCTATTCGCAGTGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttataggcagagttcacataatcactttgaatgcctggcatct----atgcagcaagtgtgcaataaatatttattgaataactaaTCTTACAGTGAAGAAGCAGCATGAAC-TGGGAATTACTTTCCATTCCA-GTTC-TGAAGTTTAGACTCATTCTAAGAACTATGAATGCTTACATCTGTGACCTTAATGTACctagatttcagttttcttgaattgagt--ttgacgagtgcatttctg----aagtcccttctagcttctaaatgtcatgaCATGAGTTCAAGATGAGACTTGTGAGTACCTTTGCATCTAAACTCAGTTCTCAAGGTCTTCCACCACCTCTTGTAAAAGGTAA-AGTTGAATGGACTTCTGTCACTTGG-------------------------------------ATCTTATTTAACCTGAATTGC i ponAbe2.chr4 I 286 C 0 s nomLeu3.chr7b 111285982 662 + 115148730 TTGCCTGCTTGAAATTTCAGAAATGTAAACACTCTGAATTGGCTTAGTGCTTGGGCTATTGGCAGACCTTTCAGAAGAAAAAGTTTTTAGATAGCGTCTATGCGAATCATACCAGCTTTTCTCAAGATGAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAACATTCTATTCACAGTGTTACCTAATAATAACATATATTAGCTTCTGGAG-Ttaagcagcttataggcagagttcacataattactttgaatgcctggcatct----atgcagcaagtgggcaataaatatttattgaataactaaTCTTACAGTGAAGAAGCAGCATGAAC-TGGGAATTACTTTCCATTCCA-CTTC-TGAAGTTTAGAGTCATTCTAAGAACTATGAATGCTTAGATCTGTGACCTTAATGTACCTAGATTTCAGTTTTCTTGAATTGAGT--TTGACGAGTGCATTTCTG----AAGCCCCTTCTAGCTTCTAAATGTCATGACATGAGTTCAAGATGAGACTTGTGAGTACCTTTTCAACTAAACTCAGTTCTCAA-GTCTTTCACCACATCTTGTAAAAAGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181087822 662 + 184069350 TTGTCTGCTTGAAATTTCAGAAATGTGAACACTCTGAATTGGCATAGTGCTTGGGTTATTGGCAGACCTTTTACAAG--AAAGTTTTTAGACAGCTTCTATGTGAATCATACCGGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACCCTAAAGGTCTTTTGAGCATTCTGTTCACAATGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttataggcagagttcacataattactgtgaacgcctggcatct----atacagcaagcgttcaatacatatttattgaataactaaTCTTGCAGTGAAGAAGCAGCATGAAC-TGGGAATTTCTTTCCATTCCA-GTTC-TAACGTTTAGACTCATTCTAAGAAGTATGAATGCTTAGATTTGTGACCTTAATGTACCCAGATTTCAGTTTTCTTGAACTGAGT--TTGACGAGTACATTTCTG----AGGCCCCTTCTAGCTTCTAAATGTAATGACTTGAGTTCAAGACGAGACTTGTGAGCACCTTTCCAACTAAACTCAGTTCTCAGGGTCTTTCTCCACATCTTGTAAAAGGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i rheMac3.chr5 C 0 I 314 s macFas5.chr5 186426169 662 + 189454096 TTGTCTGCTTGAAATTTCAGAAATGTGAACACTCTGAATTGGCATAGTGCTTGGGTTATTGGCAGACCTTTCACAAG--AAAGTTTTTAGACAGCTTCTATGTGAATCATACCGGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACCCTAAAGGTCTTTTGAGCATTCTATTCACAGTGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttataggcagagttcacataattactgtgaacgcctggcatct----atacagtaagcgttcaatacatatttattgaataactaaTCTTGCAGTGAAGAAGCAGCATGAAC-TGGGAATTTCTTTCCATTCCA-GTTC-TAACGTTTAGACTCATTCTAAGAAGTATGAATGCTTAGATTTGTGACCTTAATGTACCCAGATTTCAGTTTTCTTGAACTGAGT--TTGACGAGTACATTTCTG----AGGCCCCTTCTAGCTTCTAAATGTAATGACTTGAGTTCAAGACGAGACTTGTGAGCACCTTTCCAACTAAACTCAGTTCTCAGGGTCTTTCTCCACATCTTGTAAAAGGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i macFas5.chr5 C 0 I 312 s papAnu2.chr5 176041266 662 + 178775436 TTGTCTGCTTGAAATTTCAGAAATGTGAACACTCTGAATTGGCATAGTGCTTGGGTTATTGGCAGACCTTTCACAAG--AAAGTTTTTAGACAGCTTCTATGTGAATCATACCGGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTGAAGGTCTTTTGAGCATTCTATTCACAGTGTTACCTAATAATAACATATATTAGCTTCTGGAGTTTAAGCAGCTTATAGGCAGAGTTCACACAATTACTGTGAACGCCTGGCATCT----ATACAGCAAGCGTTCAATACATAGTTATTGAATAACTAATCTTGCAGTGAAGAAGCAGCATGAAC-TGGGAATTTCTTTCCATTCCA-GTTC-TAACGTTTAGACTCATTCTAAGAAGTATGAATGCTTAGATTTGTGACCTTAATGTACCCAGATTTCAGTTTTCTTGAACCGAGT--TTGACGAGTACATTTCTG----AGGCCCCTTCTAGCTTCTAAATGTAATGACTTGAGTTCAAGACGAGACTTGTGAGCACCTTTCCAACTAAACTCAGTTCTCAGGGTCTTTCTCCACATCTTGTAAAAGGTAA-AGTTGAATGGACTTCTATCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132883722 662 + 135778131 TTGTCTGCTTGAAATTTCAGAAATGTAAACGTTCTGAATTGGCATGGTGCTTGGGTTATTGGCAGACCTTTCACAAG--AAAGTTTTTAGACAGCTTCTATGTGAATCATACCGGCTTTTCTCAAGATAAGGGAGTCATATTAGAAGGCTTGACTCACTCTGACATTTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAGCATTCTATTCACAGTGTTACCTAATAATAGCCTATATTAGCTTCTGGAGTTTAAGCAGCTTATAGGCAGAGTTCACATGATTACTGTGagcgcctggcatct----atacagcaagcgttcaatacgtatttattgaataactaaTCTTACAGTGAAGAAGCAGCATGAAC-TGGGAATTTCTTTCCATTCCA-GTTC-TAACGTTTAGACTCATTCTAAGAAGTAGGAATGCTTAGATCTGTGACCTTAATGTACCCAGATTTCAGTTTTCTTGAACTGAGT--TTGACGAGTGCATTTCTG----AGGCCCCTTCTAGCTTCTAAATGTAATGACATGAGTTCAAGAAGAGACTTGTGAGCACCTTTCCAACTAAACTCAGTTCTCAGGGTCTTTCGCCACATCTTGTAAAAGGTAA-AGTTGAATGGACTTCTGTCACTTGG-------------------------------------ATCTTATTTAACTTGAATTGC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188268733 662 - 190850796 TTGCCTGCTTGAAATTTCAGAAACGCCAACACCCTGAATTGGCCTAGCGCTTGGGTTATTGGCAGACCTTTGACAGGAAAAAGTTTTTAGATAGCTTCTATGTGAACCATACCAGCTTTTCTCAAGATAAGGGATTCATATTAGAAGGCTTGACTCACTCTGACA-TTTATATGACTTTCTATTATTGAAACAACTCTAAAGGTCTTTTGAGTATTCCATTCACAGCGTTACCTAATAATAACATATATTAGCTTctggagtttaagcagcttatagacagagttcccataatcactttgaatgcctggcatctatacatacagcaagtgtgcagtaaatatttattgaataaatgaTCTTACAGC---GAAGCAGCATGAAC-TGGGAATTACGTTCCATTCCA-CTTG-TAAGGTTTAGAATCATTCTAGGAACTTTGAATACTTAGATCTGTGATCTTAATGTGCTTAGATTTCAGTTTTCGTGAATTGAGT--TTGACGAGTGCATTTCTT----AAGTCCCTTCTAGCTTCTCAATGTCATGGCATGGGCTCAAGATGAGAC-TGTGAGTTCCTTTTCAACTAAACTCAGTTCTCAG-GTCTTTCACCACGTCTTCTAAAGGGTAA-AGTTGAATGGACGTCTATCACTTGG-------------------------------------AGCTTTTTTATCTTGAATTGC i calJac3.chr3 C 0 C 0 s mm10.chr8 84749568 694 - 129401213 TTGCCTGCTTGAAAATTTAAGGCCACGAACATCCTGAATTTGCATGGTGCTTGGGTTATTGGCAGACCTTTCAGAAAATGAAATTTATATATAGCTTCTGGGTGAATCATACTAGCTTTCCCC-AGATAAGGCATTTCTATCTAAAGGCTTGACTTACTCTGCTCTTTTGTATGACAACCTTTTATTAAAACAATTCTAAAGGTCTTCTGAACATTCTTTT--CAGAGTTACCCAGCAGTAACTTATACTAGcccttggactttaagcagcttatagacagaactcatctaattgttttgaatcgctggcacat----gtac---aagtgttcaataaatatttattgagtaaataaTCCTACAGTGAAGAAATGGATTGAAC-TAAGACTTGCATCCCTTTCTATGTAC-TAAGGTTTAAAATCATCCTAGAAATTAT-ATCACGAAGATCTACAGCTGTTGCTGACATTCACTTCAGTGTTTATTAATTAAAGCATTGACTCCCCCATATATGGGCTAATTGACTTCTATGTTCTAAATGGCATAACATGGGCTC------ATACTTGTGAGTATTTCTCCCACTGAATTCTGTACTCAGTCTCTTAAATCACACCTTATAAGAAGTAATCATTGTATGGAGCACTACTATTTGGGAAgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgCGCACGCTTTTGATTTTG--TTGC i mm10.chr8 C 0 I 5 s canFam3.chr16 15754056 526 - 59632846 -TGCCTGCTTGAAATTTCAGAAATGTAAACACTTTGTATTGGCATAATGCTTGGGTTATTAGCAAACCTTTCAGAAG--AAAGTTAATAGATAACTTCTGAATGAATCATACCAGCTCTTCTCAAGATAGAGGATTGGTACTAGAAGTCTTGACTCACTGTGACATTTTATGTGGTTTTCTATTATTAAAAAAAATCTAAAGGTCTTTTGCACATTCTTTTCAGGGTGTTACTTAGCAGTAACATATGCCAGGCCctggacttggagctgcttataggctgagttcacat-attattttgaatggctgccacat----atacagtaagtgttcaacaaatacttattgaatgaataaTCTTACTGTGAACAACCAGCATGAACTTGGGAAGCACATTGTCTTCTA-GTTCTTAAAGTTTAAGAACATGCTACAAAGTGTGACTATTTAGATCTGCAATCTTAATGCGCTTAGATTTCAGTTTTCCTGAATA------TAGGCTAGCGTATTT-------AAGTGCCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTCTTTA-CCTGAATTGC i canFam3.chr16 C 0 C 0 a score=866911.000000 s hg38.chr4_KI270785v1_alt 82656 239 + 119912 TAAAAATACACGTACAGCCACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGaatacatggcctctactcccagggggtttataatctagtgtagaaaaaaggaa-atatatacaaaATGATGCAACTGACATGAGGGAATTTAGGGTGAGTTGGACAGTATTTTTAAATTTCTTTGCTGTGAGTCTAGATTTAGTTGAGACTTGAAATAAG s panTro4.chr4 190349976 239 + 193495092 TAAAAATACACGTACAGCAACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGaatacatggcccctactcccagggggtttataatctagtgtagaaaaaaggaa-atatatacaaaATGATGCAACTGACATGAGGGAATTTAGGGTGAGTTGGACAGTATTTTTAAATTTCTTTGCTGTGAGTCTAGATTTAGTTGAGACTTGAAATAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324007 239 + 198332218 TAAAAATACACGTACAGCAACTGCTGAAATTAAACAGTATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGAATACATGACCTCTAATCCCAGGGGGTTTATAATCTAGTGTAGAAAAAAAGAA-ATATATACAAAATGATGCAACTGACATGAGGGAATTTAGGGTGTGTTGGACAGTATTTTTTAATTTCTTTGCTGTGAGTCTAGATTTAGTTGAGACTTGAAATAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111286644 239 + 115148730 TAAAAATACATGTACAGCAACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGaatacatggcttctactcccaggggggttataatctagtgtagaaaaaaagaa-atatatacaaaATGATGCAACTGACATGAGGGAATTTAGGGTGAGTTGGACAGTATTTTTTAATTTCTTTGCTGTGAGTCTAGATTTAGTTGAGACTTGAAACAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181088798 238 + 184069350 taaaaaTACACGTACAGCAACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA---TTTCTAAGTAGAGTacatggcctctgctcccagggggtttataatctagtgcagaaaaaaagaa-atatgtacaaacTGATGTGACTGACGTGAGGGAATTTAGGGTGAGTTGGACAGTGTTTTGTAATTTCTTTACTGTGAGTCTAGATTTAGCTGAGACTTGAAATAAG i rheMac3.chr5 I 314 C 0 s macFas5.chr5 186427143 239 + 189454096 taaaaaTACACGTACAGCAACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGAGTacatggcctctgctcccagggggtttataatctagtgcagaaaaaaagaa-atatgtacaaacTGATGTGACTGACGTGAGGGAATTTAGGGTGAGTTGGACAGTGTTTTGTAATTTCTTTACTGTGAGTCTAGATTTAGCTGAGACTTGAAATAAG i macFas5.chr5 I 312 C 0 s papAnu2.chr5 176041928 239 + 178775436 TAAAAATACATGTACAGCAACTGCTGAAATTAAACAGCATCTACAAATGCAGGCATTACTCTCAGACA--TTTTCTAAGTAGAGTACATGGCCTCTGCTTCCAGGGGGTTTATAATCtagtgcagaaaaaaagaa-atatgtacaaACTGATGTGACTGACGTGAGGGAATTTAGGGTGAGTTggacagtgttttgtaatttctttaCTGTGAGTCTAGATTTAGCTGAGACTTGAAATAAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132884384 239 + 135778131 TAAAAATACACATACAGCAAATGCTAAAGTTAAACAGCATCTACAAGTGCAGGCATTACTCTCAGACA--TTTTCTTAGTAGaatacatggcctctgctcccagggagtttataatctagtgcagaaaaaaagaa-atatataccaacTGATGCGACTGACATGAGGGAATTTAGGGTGAGTTGGACAGTGTTTCGTAATTTCTTTACTGTGAGTCTAGATTTAGCTGAGACTTGAAATAAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188269395 239 - 190850796 TATAAATACACGTACAGCAACTGCCGAAATTAAACAGTATCTACAAAGGCACACATTACCCCCAGACA--TTTTCTGAGTAGaatacatgacctctactcccaaggagtttataatccagtgtagaaaaaaagaa-agatacacaaaATGATGCAACTGACATGAGGGAAGTGATGGTGAGGTGGAAGGTAATTTATAATTTACTTGCTGTGGGTCTAGATTTAGTTGAGACTTGAAATAAG i calJac3.chr3 C 0 I 337 s mm10.chr8 84750267 232 - 129401213 TAATTATAAATGT--------CACAGAAATCAATCAGTACCTGAAAACGCAGGCCTCAACTTCAGACATATTTTTTAATTACAA-ACGTGGTTTCTACTATTAAGGATTTCATACTCCAATGCATAAAAAATAAATGTACATACAAAATAATAGAACTAACATGAGGAATTTTGGATAAAATTAGAAAGTGTCCTACAATTTCCTTGTTG-AACTAAAGATTTACTTGACACTTGAAAATAA i mm10.chr8 I 5 C 0 s canFam3.chr16 15754582 223 - 59632846 ----TATAAATGTAC--------TTGGAATT----AGCACCTACAACTGCAGGCACTATACTCAGAGA-TTTTTCCACATataatacatggcctccactctgaaggagcttacaattgagggcagataaca-gaa-atatgtacaaaATGATGTAACAGACACTAGGAAACTTCAGGTGAGATGGTCAGTGCTTTATAATGACTTTGCTGGCAATCTAGATTTAGTTGAAACTTGAAATCAG i canFam3.chr16 C 0 C 0 a score=268044.000000 s hg38.chr4_KI270785v1_alt 82895 84 + 119912 TATACGTAGCAATGAAGAAGAAAATTATAAAAGCTTTAGAAAATAAGAAGCCCATGTAGAGAAGATTGAATAA-------------------------------------------TTATTTGTTTT s panTro4.chr4 190350215 84 + 193495092 TATATGTAGCAATGAAGAAGAAAATTATAAAAGCTTTAGAAAATAAGAAGCCCATGTAGAGAAGATTGAATAA-------------------------------------------TTATTTGTTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324246 84 + 198332218 TATATGTAGCAATGAAGAAGCCAATGATAAAAGCTTTAGAAAATAAGAAGCCCATGTAGAGAAGATTGAATAA-------------------------------------------TTATTTGTTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111286883 84 + 115148730 TATATGTAGCAATGAAGAAGAAAATTATAAAAGCTTTAGAAAATAAGAAGCCCATGTAGAGAAGATTGAATAA-------------------------------------------TTATTTGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181089036 84 + 184069350 TATATGTAGCAATGAAGAAGAACATTACAAAAGCTTTAGAAAATAAGAAGCCCATATAGAGAAGATTGAGGAA-------------------------------------------TTATTTGTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186427382 84 + 189454096 TATATGTAGCAATGAAGAAGAACATTACAAAAGCTTTAGAAAATAAGAAGCCCATATAGAGAAGATTGAGGAA-------------------------------------------TTATTTGTTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176042167 84 + 178775436 TATATGTAGCAATGAAGAAGAACATTACAAAAGCTTTAGAAAATAAGAAGCCCATATAGAGAAGATTGaggta-------------------------------------------ttatttgtttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132884623 84 + 135778131 TATATGTAGCAATGAAGAAGAAAATTACAAAAGCTTTAGCAAATAAGAAGCCCATATAGAGAACATTGAGGAA-------------------------------------------TTATTTGTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188269971 84 - 190850796 TGTATGGAGAAATGAAGAAGAAAATTACAGCAGCATTAGAAAATAAGAAGCCCATGTAGAGAAGATTGAGGAA-------------------------------------------GTATTTGTTTT i calJac3.chr3 I 337 C 0 s mm10.chr8 84750499 76 - 129401213 CATACATAGCCCTGTGGAAGTGTATCATATCAGTCTCAGAAGCAAAGA----CATGTTTATGGAATGGAG-----------------------------------------------TATTTTTTTT i mm10.chr8 C 0 C 0 s canFam3.chr16 15754805 125 - 59632846 TATATGTAGTGATGAAGAAGGGAATATAAGAAGC--TAGGGAAAAGGAAACGCATGTGAAAAGGAATAAGAAAACCCTATATTCtattttattttattattttaaaaaagatttatttatttatttt i canFam3.chr16 C 0 I 207 a score=324743.000000 s hg38.chr4_KI270785v1_alt 82979 86 + 119912 T-AGGAGCATATTCAATATTTTCTGAATCCATGCTAAACCTTTCCTCTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCACAGCC s panTro4.chr4 190350299 86 + 193495092 T-AGGAGCATATTCAATATTTTCTGAATCCATGCTAAACCTTTCCTCTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCACAGCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324330 86 + 198332218 T-AGGAGCATATTCAATATTTTCTGAATCCACGCTAAACCTTTCCTTTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCACAGCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111286967 86 + 115148730 T-AGGAGCATATTCAATATTTTCTGAATCCATGCTAAACCATTCCTTTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCACAGCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181089120 86 + 184069350 T-AAGAGCATATTCAGTATTTTCTGAATCCATGCTAAACCCTTCCTTTTCTTCTCTAAGCTTTCTCCCGATAAAATGTGGCGCAGCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186427466 86 + 189454096 T-AAGAGCATATTCAGTATTTTCTGAATCCATGCTAAACCCTTTCTTTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCGCAGCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176042251 86 + 178775436 t-aagagcATATTCAGTATTTTCTGAATCCATGCTAaacccttccttttcttctctaagCTTTCTCCAGATAAAATGTGGGGCAGCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132884707 86 + 135778131 T-AAGAGCATATTCAGTATTTTCTGAATCCATGCTAAACCCTTCCTTTTCTTCTCTAAGCTTTCTCCAGATAAAATGTGGCGCAGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188270055 84 - 190850796 T-AAGAGCATATTCAGTATTTTCTGAATCTATCCT-GGCCTTTCCTTTTCTGCTCTAAGCTTTCG-CAGATAAAATGTGGCAGAACC i calJac3.chr3 C 0 C 0 s mm10.chr8 84750575 86 - 129401213 TAAAAAGAATACTTACTGTTCTTTGAATCCATTTTTAGGGTTTACCTGTCTTTTCTGAGCTTTCTCCAGGTAACATGC-Gctcagcc i mm10.chr8 C 0 I 737 s canFam3.chr16 15755137 85 - 59632846 T-AAGAGCATAC-CACTATTCTCTGAATCCATTCTAAACTTTTGTGTTTCTTTTTGAAGCTTTCTGCAGATAAAATGTGTGACAACC i canFam3.chr16 I 207 C 0 a score=536296.000000 s hg38.chr4_KI270785v1_alt 83065 180 + 119912 TCCGGGACAGTCTCCTCCAGACTCTGGTCATATTAATGGCCATAGAGAGTCAGAGCcacgatttttgtcttacacctctt---------------------------------------------------------------------------------------------ttctctatgtacccaatg-tttccttttaattgattcactgcttagatttaaacaaatgtttgttagaagaaatttaaatagaaaacccaattcattatat s panTro4.chr4 190350385 180 + 193495092 TCCGGGACAGTCTCCTCCAGACTCTGGTCATATTGATGGCCATAGAGAGTCAGAGCcacgatttttgtcttacacctctt---------------------------------------------------------------------------------------------ttctctatgtacccaatg-ttttcttttaattgattcactgcttagatttaaacaaatgtttgttagaagaaatttaaatagaaaacccaattcattatat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324416 180 + 198332218 CGTGGGACAGTCTCCTCCAGACTCTGGTCATATTGATGGCCATAGAGAGTCAGAGCcatgatttttgtcttacaccgctt---------------------------------------------------------------------------------------------ttctctatgtacccaatg-ttttcttttaattgattcactgctttgatttaaaaaaatatttgttagaagaaatttaaatagaaaacccaattcattatat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111287053 164 + 115148730 TCTGGGACAGTCTCTTCCAGACTCTGGTCATATTGATGGCCATAGAGAGTCAGAGC----------------CACCTCTT---------------------------------------------------------------------------------------------TTCTCtatgtacccaatg-ttttcttttaattgattcactgcttagatttaaacaaatgtttgttagaagaaatttaaatagaaaacccaattcattatat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181089206 180 + 184069350 TCTGGGACAGTCTCCTCCAGGCTCTGGTCATATTGATGACCATAGAGAGTCAGAGCcatgatttttgtcttacacctctt---------------------------------------------------------------------------------------------ttctctatttacccaatg-ttttcttttaattgattcactgcttatacttaaacaaatgtttgttagaataaatttaagtagaaaacccaattcattatat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186427552 180 + 189454096 TCTGGGACAGTCTCCTCCAGGCTCTGGTCATATTGATGACCATAGAGAGTCAGAGCcatgatttttgtcttacacctctt---------------------------------------------------------------------------------------------ttctctatttacccaatg-ttttcttttaattgattcactgcttatacttaaacaaatgtttgttagaataaatttaagtagaaaacccaattcattatat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176042337 180 + 178775436 TCTGGGACAGTCTCCTCCAGGCTCTGTTCATATTGATGACCATAGAGAGTCAGAGCCGTGATTTTTGtcttacacctctt---------------------------------------------------------------------------------------------ttctctatttacccagtg-ttttcttttaattgattCACTGCTTATACTTAAACAAATGTTTGTTAGGATAAATTTAAGTAGAAAACCCAATTCATTATAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132884793 180 + 135778131 TCTGGGATGGTCTCCTCCAGACTCTGGTCATATTGATGACCACAGAGAGTCAGAGCCATGATTTTTGTCTTACACCTCTT---------------------------------------------------------------------------------------------TTCTCtatttacccagtg-ttttcttttaattgattcactgcttatacttaaacaaatgtttgttagaataaatttaaatagaaaacccaattcattatat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188270139 177 - 190850796 TCTGGGCCAGTCTCCTCCAGACTCTAGTC-TATTGATGGCCAT--AGATTCAGAGCCGTGATTTTCATCTGACACCTCTT---------------------------------------------------------------------------------------------TTCGCtatgtacctaatg-ttttcttttaattgattccctgcttatacttaaacaaatgtttgttagaagaaatttaagtcgaaaacccagttcatcatat i calJac3.chr3 C 0 C 0 s canFam3.chr16 15755222 267 - 59632846 TCTAGGGCTGTCATTCTCAGATTTTGGTCTTATT--TGGTCATATTGAAGCACATTGATGATTTTTGTCTTTTATCTTTTCTTCCCTCACGTATATAATGTTTTCTTATACCTTATGTACTTTTACTTATACTTTTATGTATAAGTATATTTCTTATACTTTCTTATAtgtacttttctatgtagtgaaggtttttctttcaattggcttactgttt-tacttaagcaaatgacccctggtag---tttgtacag-aaactcaaatcattacat i canFam3.chr16 C 0 C 0 e mm10.chr8 84750661 737 - 129401213 I a score=400087.000000 s hg38.chr4_KI270785v1_alt 83245 125 + 119912 atagactgtaattat-aaagataagttcaatgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagcttctgtacctgaagcct------tctctctctctttt---ttttttcaa-----------------ttga s panTro4.chr4 190350565 127 + 193495092 atagactgtaattat-aaagataagttcaatgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagcttctgtacctgaagcct----tctctctctctctctt---ttttttcaa-----------------ttga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324596 130 + 198332218 atagactgtaattat-aaagataagttcaatgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagcttctgtgcccgaagcct----tctctcttgctctcttttattttttcaa-----------------ttga i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111287217 127 + 115148730 atagactgtaattat-aaagataagttcaatgaaaacaaaacaatct---taaattcttcctgtgt--actgttgacttactgaagcatctgtacccgaagcct----actctctctctctttt---ttttttcaa-----------------ttga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181089386 128 + 184069350 atagatggtaattat-aaagataagttcaatgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagtgtctatacctga--cct----tctctctctcttttttttgttttttcag-----------------ttga i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186427732 128 + 189454096 atagatggtaattat-aaaaataagttcagtgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagtgtctatacctga--cct----tctctctctcttttttttgttttttcag-----------------ttga i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176042517 128 + 178775436 ATAGAtggtaattat-aaaaataagttcaatgaaaataaaacaatct---taaaTTCTTCCTGTGT--ACTGTTGACTTACTGAAGTGTCTAAACctga--cct----tctctctctcttttgtttgttttttcag-----------------ttga i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132884973 132 + 135778131 atagatggtaattat-aaaaataagttcaatgaaaataaaacaatct---taaattcttcctgtgt--actgttgacttactgaagtgtctatacctga--ccttctctctctctctctctctttttttttttcaa-----------------ttga i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188270316 123 - 190850796 atagatggtaattat-aaaaataatttcaatgaaaataaaacaatct---tacattcttcctgtgc--actgttgacttcctgatgcatctgtacccaaagact----tgtctttttatt-------tttattcaa-----------------ttga i calJac3.chr3 C 0 C 0 s mm10.chr8 84751398 125 - 129401213 acagatggtaattataaaaaatatgtctagtgaaaataaagcaaccctagtaaattctttgtgtgtagactgttttcctttaagggcttct---cccgaggctc----atttgcatttt--------ttttgtaag-----------------ctgg i mm10.chr8 I 737 C 0 s canFam3.chr16 15755489 140 - 59632846 atagagggc-attat-caaaatagttccaatgaaaataaaaga---t---taagttctttctgtgt--actgttaccttcttaaagcttctgcacctgagtctt----actcttctcttttcat---ttttttcaaagactttacttatttatttga i canFam3.chr16 C 0 I 101 a score=2443441.000000 s hg38.chr4_KI270785v1_alt 83370 723 + 119912 accttagcacatgtcag---------------------------------------------------------------------------agagtttattaaaaatggtagtatt-------cccaagtggagacatcttccttgaagaattcagaagaactgagaagagttgaatgagaatggaaaggg-aatcactCTATGGGGATAGTTCTATAAACCAGGTGGCTTTGTTTATGCATACTCCTTCT-----GAAA-----ACACCATACTTCTCTACGGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACAGACTGAAGAAAAGTATGAGGACTTCAAGCCATCAAA-TTTTCTAAGTTATTGAGTA---TAATTGCAGTGGATTCCCTACCTGAAGCTGAGTCAACCAGGAAAATTGTACTGTCTAAATTCTTTTTCCTTTTCTCTTGTCACCCATGGTGAATTTTTCCAATGAT-ATAATCAATTGATTTTTACCTTATGACAGTGGGAGAGGACAGGTAATAAATGTAGGAAAACCAGGAACCAAATATGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTTGAACTTT--AAAA-GCAAAACTTAAAGAAATCCCTTTATTTTGTTAAAGAAAGAAAATATATA-----CACTGGAGGATCATAAGTAAAATATTCCAAGTACAGTTACCAGCCC-C---AATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC s panTro4.chr4 190350692 717 + 193495092 accttagcacatgtcag---------------------------------------------------------------------------agagtttattaaaaatggtactatt-------cccaagtggagacatcttccttgaagaattcagaagtgctgagaagagttgaatgagaatggaaaggg-agtcactCTATGGGGATAGTCCTATAAACCAGGTGGCTTTGTTTATGCATACTCCTTCT-----GAAA-----ACACCATACTTCTCTACGGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACAGACTGAAGAAAAGTATGAGGACTTCAAGCCGTCAAA-TTTTCTAAGTTATTGAGTA---TAATTGCAGTGGATTCCCTACCTGAAGCTGAGTCAACCAGGAAAATTGTACTGTCTAAATTCTTTTTCCTTTTCTGTTGTCACCCATGGTGAATTTTTCCAATGAT-ATAATAAATTGATTTTTACCTTATCACAGTGGGAGAGGACAGGTAATAAATGTAGGAAAACCAGGAACCAAATATGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTTGAACTTT--AAAA-GCATAACTTAAAGAAATCCCTTTATTTTGTTAAAGAAAGAAAATATACA-----CACTGGAGGATCAT------AATATTCCAAGTACAGTTACCAGTCC-C---AATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195324726 723 + 198332218 accttagcacatgtcag---------------------------------------------------------------------------agagtttattaaaaatggtactatt-------cccaagtggagacatcttccttgaagaattcagaagtactgagaagagttgaaagagaatggaaaggg-aatcactCTATGGGGATAGTCCTATAAACCAGGTGGCTTTGTTTATGCATACTCCTTCT-----GAAA-----ACACCATGCTTCTCTACGGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCACGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACAGACTGAAGAAAAGTATGAGGACTTTGAGCCATCAAA-TTTTCTAAGTTATTGAGTA---TAATTGCAGTGGATTCCCTACCTGAAGCTGAGTCAACCAGGAAAATTGTACTGTTTAAATTCTTCTTCCTTTTCTCTTGTCACCCATGGTGAATTTTTCCAATGAT-ATAATCAATTGATTTTTACCTTATGACAGTGGGAGACAACAGGTAATAAATGTAGGAAAACCAGGAACCAAATGTGATTTTACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTTGAGCTTT--AAAA-GCATAACTTAAAGAAATCCCTCTATTTTGTTAAAGAAAGAAAATATACA-----CACTGGAGGATCATAAATAAAATATTCCAAGTACAGTTACCAGCCC-C---AATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111287344 723 + 115148730 accttagcacatgtcag---------------------------------------------------------------------------agagtttattcaaaatggtactatt-------cccaagtggagacatcttccttgaagaattcagaagtactgagaagagttgaaaGACAATGGAGAGGG-AATCACTCTATGGGGATAGTCCTATAAACCAGGTGGCTTTGTTTATGCATACTCCTTCT-----GAAA-----ACACCATGCTTCTCTACGGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----AT-TTTTTTGAGTTAAGTGACTCACAGACTGAAGAAAAGTATGAGGACTTTGAGCCATCAAA-TTTTCTAAGGTATTGAGTA---TAATTGCAGTGGATTCCCTACCTGAAGCTGAGTCAACCAGGAAAATTGTACTGTTTAAATTCTTTTTCCTTTTCTCTTGTCACCCATGGTGAATTTTTCCAATGAT-ATAATCAATCGATTTTTACCTTATGACAGTGGGAGAGGACAGGTAATAAATGTAGGAAAACCAGGAACCAAATGTGACTTAACATACTTGGAGTTCTCAGATAGCAGT----GATAGAAAGTTGAGCTTT--AAAA-GCATAACTTAGAGAAATCCCTTAATTTTGTTAAAGAAAGAAAATATACA-----CACTGGAGGATCATAAATAAAATATTCCGAGTACAGTTACCAGCTC-C---AATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATTAAATAACC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181089514 715 + 184069350 accttagcacacgtcag---------------------------------------------------------------------------agagtttattaaaaatggtactatt-------agcgagtggagacatcttccttgaagaattcagaagtactgagaagaactgaaagagaatGGAAAGGG-AATCAGTCTGTGGGGATGGTCTTAT-AACCAGGTGGCTTTGTTTATGCATACTC---TT-----GAAA-----ACACCATGCTTCTCTACAGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACACACTGAAGACAAGTATGAGGAGTTCAAGTCGTCACA-TTTTCTAAGTTATCGAGTA---TAATTGCAGTGGATTCCCTACCTGAAACTGAGTCAACCAGGAAAATTATT-TGTTTAAATTCTTTTTCCTCTTCTCTCGTCACCTATGGTGAATTTTTCCAACGAT-AAAATCAATTGATTTTTACCTTATGACAGTGTGAGAGGACAAGTAATAAATGTAGGAAAACCAGGAACCAAATGTGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTAGAGCTTT--AAAA-GCATAAT---AAGAAATCCCTTAATTTTGTTAAAGAAGGAAAATATACA-----CACTGGGAGATCATAAATAAAATATTCCAAGTATAGTTACCAGCCC-T---GATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186427860 715 + 189454096 accttagcacacgtcag---------------------------------------------------------------------------agagtttattaaaaatggtactatt-------agcgagtggagacatcttccttgaagaattcagaagtactgagaagaactgaaagagaatggaaaggg-aatCAGTCTGTGGGGATGGTCTTAT-AACCAGGTGGCTTTGTTTATGCATACTC---TT-----GAAA-----ACACCATGCTTCTCTACAGGGAGGCTGGAGGAAGCACTGTTAGTATTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACACACTGAAGACAAGTATGAGGAGTTCAAGTCGTCACA-TTTTCTAAGTTATCGAGTA---TAATTGCAGTGGATTCCCTACCTGAAACTGAGTCAACCAGGAAAATTATT-TGTTTAAATTCTTTTTCCTCTTCTCTCGTCACCTATGGTGAATTTTTCCAACGAT-AAAATCAATTGATTTTTACCTTATGACAGTGTGAGAGGACAAGTAATAAATGTAGGAAAACCAGGAACCAAATGTGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTAGAGCTTT--AAAA-GCATAAT---AAGAAATCCCTTAATTTTGTTAAAGAAGGAAAATATACA-----CACTGGGAGATCATAAATAAAATATTCCAAGTATAGTTACCAGCCC-T---GATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176042645 715 + 178775436 ACCTTAGCACACTTCAG---------------------------------------------------------------------------AGAGTTTATTAAAAATGGTACTATT-------ACCGAGTGGAGACATCTTCCTTGAAGAATTCAGAAGTACTGAGAAGAGTTGAAAGAGAATGGAAAGGG-AATCAGTCTGTGGGGATGGTCTTAT-AACCAGGTGGCTTTGTTTATGCATACTC---TT-----GAAA-----ACACCATGCTTCTCTACAGGGAGGCTGGAGGAAGCACTGTTAGTGTTGTTTCCATGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACACACTGAAGACAAGTATGAGGAGTTCAAGTCGTCACATTTTTCTAAGTTATCGAGTA---TAATTGCAGTGGATTCCCTACCTGAAACTGAGTCAACCAGGAAAATTATT-CgtttaaattctttttcctcttctctcgtCACCCATGGTGAATTTTTCCAATGAT-AAAATCGATTGATTTTTACCTTATGACGGTGGGAGAGGACAAGTAATAAATGTAGG-AAACCAGGAACCAAATGTGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTCAAGCTTT--AAAA-GCATAAT---AAGAAATCTCTTAattttgttaaagaaagaaaatataca-----cactGGTagatcataaataaaatattcccagTATCGTTACCAGCCC-C---GATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTACTTAACATT-AATAACC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132885105 717 + 135778131 accttagcacatgtcaa---------------------------------------------------------------------------agagtttatttaaaatggtactatt-------accaagtggagacatcttccttgaagaattcagaagtactgagaagagttgaaagagaatggaaaggg-aatCAGTCTGTGGGGATTGTCTTAT-AACCAGGTGGCTTTGTTTATGCATACTC---TT-----GAAA-----ACACCATGCTGCTCTACAGGGAGGCCGGAGGAAGCACTGTTAGTGTTGCTTCCGTGG-TTTTGTTAGATGTCAAACTCAGAG----ACATTTTTTGAGTTAAGTGACTCACACACTGAAGACAAGTATGAGGAGTTCAAGCCGTCACA-TTTTCTAAGTTATCGAGTA---TAATTGCAGTGGATTCCCTACCTGAAACTGAGTCAACCAGGAAAATTGTTCTGTTTAAATTCTTTTTCCCCTTCTCTCGTCACCCATGGTGAATTTTTCCAACGGT-AAAATCAATTGATTTTTACCTTATGACAGTGGGAGAGGACAAGTAATAAATGTAGGAAAACCAGGAACCAAATGTGATTTAACATACTTGGAGTTCACAGATAGCAGT----GATAGAAAGTCGAGTTTT--AAAA-GCATAAT---AAGAAATCCCTTAATTTTGTTAAAGAAAGAAAACATATA-----CACTGGTAGATCATAAATAAAATATTCCCAGTATAGTTACCAGCCCAT---GATGAGTGAGATCCATGCTTAGAGACAGTCGTGATTCTTATTTAACATT-AATAACC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188270439 720 - 190850796 agctcagcatgtgtcag---------------------------------------------------------------------------agagtttattaaaaatggtactatt-------cccaagtggagacatctttcttgaagaattcggcagtactgagaaaagttgaaagagaacggaaagggaaatcactCTACACGGAAGGTCTTCT-AACCA-GTGGCTTTGTTTATGCATTCTTCTTCTTAAAAGAAA-----ACATCGTGCTTCTCTCTGCGAAGGCTGGAGGAAGCACTGTTAGT-TTGTTT-CACGG-TTTTGTCAGATGTCAGATTCAGAG----ACGTTTTGTGAGTTAAGTGACTC----ATTGAAGACAAGTATGAGGACTTCAAGCCGTCACA-TTTTCTAAGTTACTGAGTG---TAATTGCAGTGGATTCCCTACCTGAAGCTGAGTCAGCCAGGAAAATTGTGTTGTTTAAATTCTTTTTCCTCTTCTCTCGTCACCCTTGGTGAATTTTTCCAATGATAAAAATCAATTGA-TTTTACCTTATGACGGTGGGACAGGACAGGTAATAAATGTAGGAAAACCAGGGATCAAATGTGATTTAACGTACTTGGAGTT-----ATAGCAGTGATAGATAGAAAGTTGAGCTTT--AAAA-GCATAATTTTAAAAAGTTCCTTTATTTTGTTAAAGAAAGAAAATATACA-----CACTGGTAGATGATAAATAAAACATTCCAAGTATAGTTACCAGCCC-C---AATGAGAGAGATCTATGATTAGAGACAGTCATGATACTTACTTAACATT-AGTAACT i calJac3.chr3 C 0 C 0 s mm10.chr8 84751523 682 - 129401213 agtttagctcatgtttg---------------------------------------------------------------------------tgagcttattgaaaa-ggttctcat-------cccaaggtgagatgggctt-tcaaatgattcagaagcaatgag--gagttgggaaagaacaaaagagg-aa--aattcttgggc-----------aatca------tttctttattcatatatccttt-----gaaatggatacattttgcttatcgttagAAAAATTAGAGGAACCGCTATGTATATGGTCACT-------------GATGTTAGACTAGAAGAATAATAGTCTGTGAGCTAGATGATTC--AAGCTACATAGAATTTT--GGACCTACTAGGATCCGA-TTTTCCA--CTATCGAGAATGCTAATTATAGTGAGCTCCCCAGCTGAAGCTGCCTCACATGTGAAGATGTCA-TATTCAAGT--------CTTCTCCCCTGTCACTCTTGCTCAATCCTTCCAGGGAT-AAACTTCAAATAATTTTAGTCTATGACAGTAGCAATGGGCAGATATCAAATGCAAACAAAATAGGAACTAAATGTGATTTAATATAGTCAAAGTATAGAGATAACACT-------AAAAATATGGGTTTA--AAAATGTGTGATTTAATACAA---ATTAAATTTGTTAAGGAGAAAAAATATATAAAAATCACCA------CATAAATAAAATATTTCAAGAACAGTTACCAGCCC-TCTAGGTAAGGAGAAGCCCTGCGGAGAGATAGTTTTTATTCTTACTGAACACT-GAGAATC i mm10.chr8 C 0 I 405 s canFam3.chr16 15755730 792 - 59632846 acctgagcggatggcagacacttaactgactgagccacccaggcactcctgctcttatctttttgaaatggaaacgttagcacaaagtttaaagagtttggtaaaaa-gctattgtccccaaagcccaaatggagacttcctccttgaagaatttaaaagtagtgagaagtgttgaaaaA-AATGAAAAGAG-TA--AGTCTATGGCCACAGCCTTAG-GGTCAGGTGGCTTTGTTTATGCATATTCCTTCT-----GAAAGGAAGACACTGTGCTTATCTGCTGGGAGGCTGGAGGAAGCATTGTTAAT---GTTTCTATAACTTCTGTTGGATGTTAAAGTTGAAGAT--ATATTCTGTGGGCCCAAGAACTCACAGGCTGAAAATAGGCACTAAGACAACTAGTAGTCAGA-TTTTCCAAGTTGTTGAGTA---TAATTAGAGTGGATTCTCTACCTGAAGCTGAGTAAAATAGGAAAAT-GTATTGTTTAAATTCTTTTTCTTTTTCTCTTGTCACCTGTGGTAAATGTTTCCAATGAT-AAAATCAATTAA-CTTTCTTTTATGACAG----AAAGGTCAGGCAATAAATACAGGAAAACCAGGAATTGAGTGTGATTCATAATACTCAGAGTTC----ATAGCAGT----GATAGAAATTTGAGattttaaaaa-atataattaaaaaaaa----ttaatttt-tCAAGGGAAGAGATTATACA-----CACTGGTAGGTCATAAGTTAAAGATCTCAAATACACATACTAGCCCCT---AAGGAGTGGGACTC-TGCTCAGGGGAAATGGTTATTTTTGTTTAACACT-GAGAATC i canFam3.chr16 I 101 C 0 a score=2655883.000000 s hg38.chr4_KI270785v1_alt 84093 829 + 119912 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTACAGAATATATTAAAATATTATTTTACT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC-CAAAAAAATAAGGTAAAACAATAGTGAAGAATCCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAACTTATGATGTACGACAGTAATATCCTTTAGTGAAAAAGCATAGCC---------TCGTAAG---AGATGCTTG---CAGGGATTTAATAGAAGAAAGGAGCACACTGGAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTTCTATG-GAGCGTGAAGAAAGGGCAGGCTCTTGACAGGGAATTATATAGGGTGTAGG-------ACACTTGGCTGG---ACATCTACGACAGCGAGACAGGTGGAAACAGCAGTGAGA------AAGCG----TGTTGGGTAGTTAGTGCAAAGCCCAGCTTTGTTGGAATAGAGGAGAACAGGAAGACCTGAGGCTGGGAAGAGACGCCAGGATGAAGAAAGATAAG----CAAAGATTTGTGACTAGCACAGAAGAACTCGCCATTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCGCAAACCATGGCTCTAACATTAGGCAAG----ATGCATAGTCTTTTAAGCATCATCACTGGCAGAGCTCCTAGAT-AGATACTCGTAATGATAATAGGTACCATGTGTTGAATGCATATCAAGTGCTGGGCATAGCACTGGGTGGCTTAGATAC-------------------ACTATACTTCTGTGACAGAGGCATCATCTT------TATTTTCCCAGACCACAAAA-A------------------AAAAAGTAG------AGCCTCTT s panTro4.chr4 190351409 833 + 193495092 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAACGTAGGTGATATAATCAATATCATCATCACTACAGaatatattaaaatattattttaCT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC-AAAAAAAATAAGGTAAAACAATAGTGAAGAATGCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAACTTATGATATATGACAGTAATATCCTTTAGTGAAAAAGCATAGCC---------TCGTAAG---AGATGCTTG---CAGGGATTTAATAGAAGAAAGGAGCACACTGGAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTTCTATG-GAGCGTGAAGAAAGGGCAGGCTCTTGACAGGGAATTATATAGGGTGTAGG-------GCACTTGGCTGG---GCATCAACGACAGCGAGACAGGTGGAAACAGCAGTGAGA------AAGCG----TGTTGGGTAGTTAATACAAAGCCCAGCTTTGTTGGAATAGAGGGGAACAGGAAGACCTGAGGCTGGGAAGAGACGCCAGGATGAAGGAAGATAAGCAAACAAAGATTTGTGACTAGCACAGAAGAACTCGCCATTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCGCAAACGATGGCTCTAACATTAGGCAAG----ATGCATAGTCTTTTAAGCATCATCACTGGCAGAGCTCCTAGAT-AGATACTCGTAATGataataggtaccatttgttgaatgcatatcaagtgctgggcatagcactgggtggcttagatac-------------------actatACTTCTGTGACAGAGGCATCATCTT------TATTTTTCCAGACCACAAAA-A------------------AAAAAGTAG------AGCCTCTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195325449 832 + 198332218 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTGCAGaatatattaaaatattattttaCT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATACAAAAAAAAATAAGGTAAAATAATAGTGAAGAATCCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAGCTTATGATGTACGACAGTAATATCCTTTAGTGAAAAAGCATAGCC---------TCGTAAG---AGATGCTTG---CAGGGATTTAATAGAAGAAAGGAGCACACTGAAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTTCTATG-GCACGTGAAGAAAGGGCGGGCTCTTGACAGGGAATTCTATGGGGTGTAGG-------TCACTTGGGTGG---GCATCTACGGCAGCGAGACAAGTGGAAACAGCAGTGAGA------AAGTG----TGTTGGGTAGTTAGCGCAAAGCCCAGCTTTGCTGGAATAGAGG-GAACAGGAAGAGCTGAGGCTGGGAAGAGAAGCCAGGATGAAGGAAGATAAGCAAACAAAGATTTGTGACTAGCACAGAAGAACTCGCCATTTGCAGAATTAAGTGTCACTCTAACGTCAAGGACAGGCGCAAACGATGGCTCTAACATTAGGCAAG----ATGCATAGTCTTTTAAGCATCATCATTGGCAGAGCTCCTAGAT-AGATACTCGTAATGataataggtaccatttgttgaatgcatatcaagtgctgggcatagcactgggtggcttagatac-------------------actatACTTCTGTGACAGAGGTATCGTCTT------TATTTTTCCAGACCAC-AAA-A------------------AAAAAGTAG------AGCCTCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111288067 822 + 115148730 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTACAGAATATATTAAAATATTATTTTACT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC--AAAAAAATAAGGTAAAATAATAGTGAAGAATCCAAGAT-TATGGGACAAAA--CCCGTCTTCAAGGAGCTTATGATGTATGACAGTAATATCCTTTAGTGAAAAAGCATAGCC---------TCATAAG---AGATGCTTG---CAGGGATTTAATAGGAGAAAGGAGCACACTGAAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTTCTACG-GAGTGTGAAGAAACGGCAGGCTCTTGACAGGGAATTATACAGGGTGTAGG-------GCACTTGGGTGG---GCATCTACGAGAGTGAGACAAGTGGAAACAGCAGTGAGA------AAGTG----TGTTGGATGGTTAGTGCAAAGCCCAGGTTT-TTGGAATATAGGGGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGATGAAGGAGGATAAA----CAAAGATTTGTGACTAGCAAAGAA-----CAGAATTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCACAAATGATGGCTCTAACATTAGGCAAG----ATGCATAGTCTTTTAAGCATCATCATTGGCAGAGCTCCTAGAT-AGATACTTGTAATGataataggtaccatttgttgaatgcatatcaagtgctgggcatagcactgggtggcttagatac-------------------actatACTTCTGTGACAGAGGTATCATCTT------TATTTTTCCAGACCAAAAAA-A------------------AAAAAATAG------AGCCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181090229 832 + 184069350 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTACAGAATATATTAAAATATTACTTTACT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC---AAAAAATAAGGTAAAATAATCGTGAAGAATCCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAGCTTATGATGTACGACAGTAATATCCGCTAGTGAAAAAGCGTAGCC---------TTGTAAG---AGGGACTTG---CAGGGATTTAAAAGAAGAAAGGAGCGCACTGGAACAGGAG--------GTGGCTTCATGAA----GGAG----CATTTGCTACA-GAGCGTGAAGAAAGGGCAGGCTCTTGACAGGGAATTATATAGGGTGCAGGGTGTAGTGCATTTGGGTGG---GCATCTACGACAGCGAGACAAGTGGAAACTGCAGTGAGA------AAGTG----TGTTGGATGGTTAGTGCAAAGCCCAGGTTTGTTGGAATATAGGGGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGATGAAGGAATGTAAACAAACGAGGCTATGTGACTAGCACAGAAGAA--CAGAGTTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCACAAGCGATGGCTCTAACA-TAGGCAAG----ATGCATGGTCTTTTAAGCATCATCATTGCCAGAGCTCCTAGAT-TGCTACTCGTAAGGatagtaggtaccatttgttgaatgcatatcaagtgttgggcatagcactgggtggcttagacac-------------------actatTCTTTTTTGACAGAGGTATCATCTT------TATTTTTCCAGACCACAAAA-A---------------------TAATAG------AGCCTCTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186428575 833 + 189454096 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTACAGAATATATTAAAATATTACTTTACT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC--AAAAAAATAAGGTAAAATAATCGTGAAGAATCCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAGCTTATGATGTATGACAGTAATATCCGTTAGTGAAAAAGCGTAGCC---------TTGTAAG---AGGGACTTG---CAGGGATTTAAAAGAAGAAAGGAGTGCACTGGAACAGGGG--------GTGGCTTCATGAA----GGAG----CATTTGCTACA-GAGCGTGAAGAAAGGGCAGGCTCTTGACAGGGAATTATATAGGGTGTAGGGTGTAGTGCATTTGGGTGG---GCATCTAGGACAGCGAGACAAGTGGAAACTGCAGTGAGA------AAGTG----TGTTGGATGGTTAGTGCAAAGCCCAGGTTTGTTGGAATATAGGGGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGATGAAGGAATGTAAACAAACGAGGATATGTGACTAGCACAGAAGAA--CAGAGTTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCACAAGCGATGGCTCTAACA-TAGGCAAG----ATGCATGGTCTTTTAAGCATCATCATTGCCAGAGCTCCTAGAT-TGCTACTCGTAAGGatagtaggtaccatttgttgaatgcatatcaagtgttgggcatagcactgggtggcttagacac-------------------actatACTTTTTTGACAGAGGTATCATCTT------TATTTTTCCAGACCACAAAA-A---------------------TAATAG------AGCCTCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176043360 833 + 178775436 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACtacagaatatattaaaatattactttact-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACtttgtatac--aaaaaaaaaaggtaaaataatagtGAAGAATCCAAGAT-TATGGGACAAAA--CCCATCTTCAAGGAGCTTATGATGTACGACAGTAATATCTGTTAGTGAAAAAGCGTAGCC---------TTGTAAG---AGGGGCTTG---CAGggatttaaaagaagaaaggagcACACTGGAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTGCTACG-GAGCGTGAAGAAAGGGCAGGCTCTTGACAGGGAATTATATAGGGTGTAGGGTGTAGTGCATTTGGGTGG---GCATCTACAACAGCGAGACAAGTGGAAACTGTAGTGAGA------AAGTG----TGTTGGATGGTTAGTGCAAAGCCCAGGTTTGTTGGAATATAGGGGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGATGAAGGAAGGTAAACAAACGAGGATTTGTGACTAGCACAGAAGAA--CAGAGTTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCACAAGCGATGGCTCTAACATTAGGCAAG----ACACATGGTCTTTTAAGCATCATCATTGCCAGAGCTCCTAGAT-AGCTGCTCGTAAGGATAGTAGgtaccatttgttgaatgcataTCAAGTGTTGGGCATAGCACTGGGTGGCTTAGACAC-------------------ACTATACTTTTGTGACAGAggtatcatctt------tatttttccagaCCACAAAA-A----------------------ATTAG------AGCCTCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132885822 832 + 135778131 ACAAACTGTGCACCAGATGCTATGAACTCAAGTCCAAGGTAGATGATATAATCAATATCATCATCACTACAGAATATATTAAAATATTACTTTACT-T-TAGAAGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATCC---AAAAATTAAGGTAAAATAATAGTGAAGAATGCAAGAT-TATGGGACAAAA--CTCATCTTCAAGGAGCTTATGATGTACGACAGTAATATCCGTTAGTGAAAAAGCACAGCC---------TTGTAAG---AGGGGCTTG---CAGGGATTTAAAAGAAGAAAGGAGCACACTGGAAAAGGAG--------GTGGCTTCATGAA----GGAG----CATTTGCTACA-GAGCATGAAGAAAGGGTAGGCTCTTGACAGGGAATTATATAGGGTGTAGGGTGTAGTGCATTTGGGTGG---GCATCTATGACAGCGAGACAAGTGGAAACTGCAGTGAGA------AAGTG----TGTTGGATGGTTAGTGCAAAGCCCAGGTTTGTTGGAATATAGGGGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGATGAAGGAAGGTAAACAAACAAGGATTTGTGACTAGCACAGAAGAA--CAGAGTTTGCAGAATTAAGTGTCACTCTAATGTCAAGGACAGGCACAAGCGATGGCTCTAACATTAGGCAAG----ATGCATGGTCTTTTAAGCATCATCATTGCCAGAGCTCCTAGAT-AGCTGCTCGTAAGGatagtaggtaccatttgttgaatgcatatcaagtgttgggcatagcactgggtggcttagatac-------------------actatACTTCTGTGACAGAGGTATCATCTT------TATTTTTCCAGACCACAAAA-A----------------------ATTAG------AGCCTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188271159 752 - 190850796 GCAAACTGTGTACCAGATGCTATAAACTCGAGTCCAAAGTAGATGATATAACCAA---CATCATCACTACAGAATATATTAAAATGTTGTTTTACT-G-TAGAGGTTGCCTTTCAAGTTAACTAGTATTTGAGCACTTTGTATAC-AAAAAATATGCGGTAAAATAGTAGTGAGGAATGAAAGAC-TGCGGGACAAAA--CCCGTCTTCAAGGAGCTTATGACGTGCGACGGTAACATCCTTTAGTGGAAAAGCACAGCC---------TCATAAG---AGGGGCTTG---CAGGGATTTCAAAGAAGAAAGGAGCACCCTGGAAAAGGAG--------GTGGCTTCATGGA----GGGG----CATTTGCTATG-GAACATGAAGAAAGGGCAGGCTCATGACAGGCAATCATAGAAAGTGTAGG-------GCATCTGGGTGG------------------------------------------------------------------------GCAACGCCCAGGTGTGTTGGAATATAGCAGAACAGGAAGAGCTGAAGTTGGGAAGAGAGGCCAGGACGAAGGAAGATAAGTGGACAAAGATTTGTGACTAACACAGAAGACAACGCCATTTGCAGAACTGAGTGTGGCTCTAATGTCATGGGCATGTGGAAACGATGGCTCCAACATTAGGAAAG----ATGGACAGTCTTTTAAGCATCATCATTGGCAGAGCTCCTAGAT-AGACAGTCATAATGATAACAGGTACCATTTGTTGAATGCATTTCAAGTGCT-------------GGTGCCTTAG--------------------------ATACTTTTGTGACAGAGGTATCATCTT------TATTTTTCCAGACCAAGAAACA------------------AAAAACTAG------AACCTCTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84752610 854 - 129401213 ACCAGCTGAGTATCAAATAAAGTTGAATCAAGTCCAAGA-GGATGGCGCCAACAATATC-------------AGAATATTATAATCTTATCTTATTAC-TGGAGGTTGCCATCCAATTCAAACAGTATTTGAGCACTTTGGATAA-------ATTATCATGGTATAATAGAGAAGAATAAAAGATGTGCAAAACAAGATTCCTGTTTCCAAAAACCTTTTGATCCATGACAATACTAAGCCTTAACAAAGAAGGGTATCAAACAAATTGACACAAA---ATCATCTTG---CAAGAACTTAAAAGGAGAATGGAGCTTAGAAGTGAAGGAG--------GGAGCTTCCTGGAACAGGCAG----CAGTATCTATGTGGGTGCAAAGACAGATCAGACT--TAACTGGAAAATACTGAAGATGTAGGAGTT---TCACTTGAATGT------CTTAGGACCACTCTGTAGATGGTAACAGAAGAGAAA------ACATGAGACCGTTTGCTACTTATTAGGAAGCCAGTGGTTGTTTGAATCTAGGAGAATAGTGAAAGTT-AAATTGGGGAGGATGGTTTGTACTAACCAGTAAGAGCAAACACTTGTCTGACGCTAGCCCAGAAT----GGATATTTACATAATGAAATGTAGACCTAATGTCCAGGACAGGCTGGAGTGATGTCTCCAATGTTAAACAAA----CTGCAGAGTCCTTCAGTTATAATCACAGATAGAGCCCTTTGGTGAGCAGGTCATTATAACCATGGGCAACATTTGCTAAGCTCACAGCACACATCAGGCATAACCCTGTCTACTATTG-CAT-------------------AGTACCCAGTTTTTA-----ATATCATCCTGTGATATATTTTCACATATAaaacaa-acaaacaaacaaacaaacaaacaaacaaacTGCTAGTCTCCT i mm10.chr8 I 405 C 0 s canFam3.chr16 15756522 853 - 59632846 ACCAACTGTGCACT--------TGAATTCAAGTCCAAGTTCAATGGGATAATCAATATCAACATTGTTATAGAATATATTAAAGTATTATCTGATT-TCTGGAGTTTGCCTTTCAatttagccaatatttgagta--ttgtgtgc--aaacaaaatatgccaaatgacaatgtgg-attaaagatgcgtgggacataattctggtcttctgggaacttatgatctacaaaggtagtgagctgtagcagagaaggacaaca---------caatgagggcaaagtcatggtatggggacataaaataagaaaggagcacattgataagtgtggcttatcagtggcttcatgga----gaaggtcacgtctgatgtg-ggctgtgaaggaagaaagggcttttgacagagaatgaaggagagtatagg-------gcatttatttagtacatatctgtgacagagacgcaaatgctaacagcagtggaaagcttgagggg----tgtttggtggttagtgacaagtccaggtttactgggatagagcgggatagggagagtgaaaatgagaaaaataagctgggATACAGTGAAGTAAGCAAACA------CATGACTAACAGAGAACAC--AGCCATTCACAGAATTCAGTGTGGCTCTAATGTCAAGGGCAGACCCAAGTGATGACTCCAGCATTAGACAAGGCACATGCATGATGTTTT---CATCCCCAATGGAAGAGCTCATAGGT-AGC-AGTCGtaataatgtt---tactatttgttgaacgtacatccagtgctaggcatgatactagatgtctcacatacattataaggtttcatttttactataaatctgtgacatagatactatctt------tctttttacggtcaagaaaa-c-------------------------ag------agcctctt i canFam3.chr16 C 0 I 441 a score=3208110.000000 s hg38.chr4_KI270785v1_alt 84922 850 + 119912 AAGGAGCTGGAAGTCAAGGATAAATAATTTGTATCACTCTGGTACAAGTAGTCATTTTAGTTTATTACCTAGGTATCATCAAG-----GAAGAACGGGCTCATAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAA-CATCTCCCACGTGAGATTCCTAAACAGTTCTTCCAATCTATAATATCTGGTAATGAAATGCAAATG------------------ACAATAAAAGGGCCCAGTTCCATTCGCAAGCCATAGTTCATAACAAA-TCACAAGGGTTTTCTATGGCAAGCAGCTTCTTGAGAATTGCAGTCACAC-TTGACATGGTCATCAGCCATTTTTCAAGATGCCACGTCTCAAGCGGGGCTAT---TAATCCCATTTCTTGCGTATTTCAATCTCA-TTTTACAATGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATG----TTGTTTGGCATGA---------------------------------------------------------------CTTCTTTCAGTACATCGTATTTTTTGTTACATGATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACCTAGTTTGAAGTGGATGGCTTAAA-CTATTTACAAAAATCCCCCTGGTTATTTTTCTTTCCCGAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAAATAAGCTTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTTATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTGT------------TAGGAGAAA-CTGAAAAACTGTTCATTAAAAATTATAAGAAATGC-------------------------------------TTTTGGTTT---CTAAGAGAAGTCTGttaatcagggttctcc------agagaaacggaaccaatag s panTro4.chr4 190352242 854 + 193495092 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACTCTGGTACAAGTAGTCATTTTAGTTTATTACCTAGGTATCATCAAG-----GAAGAATGGGCTCATAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAA-CATCTCCCATGTGAGATTCCTAAACAGTTCTTCCAATCTATAATATCTGGTAATGAAATGCAAATG------------------ACAATAAAAGGGCCCAGTTCCATTCGCAAGCCATAGTTCATAACAAA-TCGCAAGGGTTTTCTATGGCAAACAGCTTCTTGAGAATTGCAGTCACAC-TTGACATGGTCATCAGCCATTTTTCAAGATGCCACGTCTCGAGCGGGGCTAT---TAATCCCATTTCTTGCGTATTTCAATCTCA-TTTTACAATGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCTTTCAGTACATCATATTTTTTGTTACATCATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACAAATCTTGCTACCTAGTTTGAAGTGGATGGCTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTTTCCCGAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAAATAAACCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTTATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCATTAAAAATTATAAGAAATGT-------------------------------------TTTTGGTTT---CTAAGAGAAGTCTGttaatcagggttctcc------agagaaacagaaccaatag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195326281 854 + 198332218 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACTCTAGTACAAGTAGTCATTTTAGTTTATTACCTAGGTATCATCAAG-----GAAGAATGGGCTCATAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAA-CATCTCCCACGTGAGATTCCTAAACAGTTCTTCCAATCTATAATATCTGGTAATGAAATGCAAATG------------------ACAATAAAAGGGCCCAGTTCCATTCGCAAGCCATAGTTCATAACAGA-TCACAAGGGTTTTCTATGGCAAGCAGCTTCTTGAGCATCGCAGTCACAC-TTGACATGGTCATCAGCCATTTTTCAAGGTGCCCCGTCTCAAGCGGGGCTAT---TAATCCCATTTCTTGCGAATTTCAATCTCA-TTTTACAATGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCTTTCAGTACATCGTATTTTTTGTTACATGATCAATATGAGAGTCATCTCTCCAGAAAAGGCAACTAATCTTGCTACCTAGTTTGAAGTGGGTGGCTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTCTCCCGAGTCTCTTTCCTTATCCTTAGACCCCTTTATAAATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTTATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGCTCATTAAAAATTATaagaaatgt-------------------------------------ttttggttt---ctaagataagtctgttaatcagggttctcc------agagaaacagaaccaatag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111288889 855 + 115148730 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACTCTACTATAAGTAGTTATTTTAGTTTTTTACCTAGGTATCATCAAG-----GAAGAATGGGCTCATAAATGTTTTGCCGTTAACATGCAAAGTCCTAGAA-CATCTCCCACGTGAGATTCCAAAGCTGTTCTTCCAATCTATAATGTTTGGTAATGAAATGCAAATG------------------ACAATAAAAGGGCCCAGTCCCATTCGAAAGCCATAGTTCATAACAAATTCACAAGGGTTTTCTACGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTGACATGGTCATCAGCCATTTTTTAAGATGCCACGTTTCAAGCGGGGCTAT---TAATCCCATTTCTTGAGTATTTCAATCTCA-TTTTACAATGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCTTTCAGTACATCATATTTTTTGTTACATGATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACCTAGATTGAAGTGGATGACTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTTTCCCAAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAAATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATAAATGATTATTGGAATATCAGATTTAGTTGGCGGCTATTTATATTAATAT--AACAAGTTGACATTGGTTTGGTCT------AGAA---------CCAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCATTAAAAATTATAAGAAATGT-------------------------------------TTTTGGTTT---CTAAGAGAAGTCTGttaatcagggttctcc------agagaaacagaaccaatag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181091061 850 + 184069350 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACTCTAGTACAAGCAG-----TTAGTTTATTACCTAGGTATCATCAAT-----GAAGAATGGACTCGTAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAACCATCTCCCACGTGAGATTCCTAAGCAGTTCTTCCAGTCTATAATGTTTGGTCATGAAATGCAAATG------------------ACAATAAAAGGACCCACTTGCATTCGAGAGTCATAGTTCGTAACAAA-TCACTAGGGTTTTCTATGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTCACATGGTCATCAGCCATTTTTCAAGATGCCACGTTTCAAGCGGGGCTAT---TAATCCCATTTCTTGCATATTTCAATCTCA-TTTTACAGTGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCCTTCAGTACATCGTATTTTTTGTTACATGATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACGTAGTTTGAAGCAGATGACTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTTTCCCGAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAGATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTCATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCGTTAAAAATTATGAGAAATGT-------------------------------------TTTTGGCTT---CTAAGAGAAGTCTGttaatcagggttctcc------agaaaaacagaaccaatag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186429408 848 + 189454096 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACTCTAGTACAAGCAG-----TTAGTTTATTACCTAGGTATCATCAAT-----GAAGAATGGACTCGTAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAACCATCTCCCACGTGAGATTCCTAAGCAGTTCTTCCAGTCTATAATGTTTGGTCATGAAATGCAAATG------------------ACAATAAAAGGACCCACTTGCATTCGAGAGTCATAGTTCGTAACAAA-TCACTAGGGTTTTCTATGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTCACATGGTCATCAGCCATTTTTCAAGATGCCACGTTTCAAGCGGGGCTAT---TAATCCCATTTCTTGCATATTTCAATCTCA-TTTTACAGTGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCCTTCAGTACATCGTATTTTTTGTTACATGATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACGTAGTTTGAAGCAGATGACTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTTTCCCGAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAGATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTCATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCGTTAAAAATTATGAGAAATGT-------------------------------------TTTTGGCTT---CTAAGAGAAGTCtgttaatcagggttctcc------agaaaaacagaaccaat-- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176044193 848 + 178775436 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACCCTAGTACGAGCAG-----TTAGTTTATTACCTAGGTATCGTCAAT-----GAAGAATGGACTCATAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAACCATCTCCCACGTGAGATTCCTAAGCAGTTCTTCCGGTCTATAATGTTTGGTCATGAAATGCAAATG------------------ACAATAAAAGGACCCAGTTGCATTCGAGAGTCATAGTTCATAACAAA-TCACTAGGGTTTTCTATGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTCACATGGTCATCAGCCATTTTTCAAGATGCCACGTTTCAAGCGGGGCTAT---TAATCCCATTTCTTGCATGTTTCAATCTCA-TTTTACAGTGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCCTTCAGTACATCGTATTTTTTGTTACATGATCAATATGAGAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACGTAGTTTGAAGCGGATGACTTAAA-CCATTTACAAAAATCCCCctggttatttttctttcccgAGTCTCTTTCCTTACCCTTAGGCTCCTTTATAGATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTCATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAagttatttt------------taggagaga-ctgAAAAACTGttcattaaaaattatgagaaatgT-------------------------------------TTTTGGCTT---CTAAGAGAAGTTTGTTAAtcatggttctcc------agagaaacagaaccaat-- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132886654 848 + 135778131 AAGGAGCTTGAAGTCAAGGATAAATAATTTGTATCACCCTAGTACGAGCAG-----TTAGTTTATTACCTAGGTATCATCAAT-----GAAAAATGGACTCATAAATGTTTTGCAGTTAACATGCAAAGTCCTAGAACCATCTCCCACGTGAGATTCCTAAGCAGTTCTTCCGGTCTATAATGTTTGGTCATGAAATGCAAATG------------------ACAATAAAAGGACCCAGTTCCATTCGAGAGTCATAGTTCATAACAAA-TCACCAGGGTTTTCTATGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTCACATGGTCATCAGCTATTTTTCAAGATGCCACGTTTCAAGCGGGGCTAT---TAATCCCATTTCTTGCATATTTCAATCTCA-TTTTACAGTGTGAAATTGCTAGGAGACACACATTTATC-AATATGTTCCATAATGTTATTTGTTTGGCATGA---------------------------------------------------------------CTTCCTTCAGTACATCGTATTTTTTGTTACATGATCAATATGACAGTCTTCTCTCCAGAAAAGGCAACTAATCTTGCTACCTAGTTTGAAGCGGATGACTTAAA-CCATTTACAAAAATCCCTCTGGTTATTTTTCTTTCCCGAGTCTCTTTCCTTATCCTTAGGCCCCTTTATAAATAAGCCTGTTTCTTTGCAGTCTGTGGCTCCAAAACATGAATGATTATTGGAATATCAGATTTAGTTGGCAGCTGTTTATATTAATGT--AACAAGGTGACATTGGTTTGGTCT------AGAA---------CTAGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCATTAAAAATTATGAGAAATGT-------------------------------------TTTTGGCTT---CTAAGAGAAGTCCGttaatcagggttctcc------agagaaacagaaccaat-- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188271911 839 - 190850796 AAGGAGCTTGAAG-------TAAATAATATGTATCACTCTAGTAAGAGTACTTATTTTAG-TCATTACATTGGTATCATCAAG-----GAAGAATGCATTCATAAATGTTTTTCAGTTAACATGCAAGGTCCTAGAA-CGTCTCCCATGTGAGATGCCTAAGCAGTTCTTCCAATCT---GTGTTTGGTAATGATATTCAAATG------------------ACAATAAAAGGGCCCAGTTCCTTTCACAAGCCATAATTCATGACAAA-TCATGAGGGTTTTCTGTGGCAAGCAGCTTCTTGAGAATCGCAGTCACAC-TTGACATTGCCATCAGCCATTTTTCAAGATGCCACGTTTCAAGTGGGGCTAT---TAATCCCATTTCTTGCATATTTCGATCTCA-TTTTGCAC--TGAAACTGCTAGGAGACACTCATTTATC-AATATGTGGCATAATGGTATTTGTTGGGCATGA---------------------------------------------------------------CTTCCTTCAGCACATCATATTTTTCGTTGCATAATCAATATGAGACTCTTCTCTCCAGAAAAAGCAACTAATCTTGCTACCTAGTTCGAAGTGGATGACTTAAA-CCATGTACAAAAATCCCTCTGGTTATTTTTCTTTCCCCAGTCTCTTTCCTTATCCTCTGGCCTCTTTATAAATAAGCCTGTTTCTTTGCAGTCTGTGGTTCCAAAACATGAATGATTATTGGAGCATCAGATTTAGTTGGCAGGGATTTATATTAATGT--AACAAGGTGATGTTGGTTTGGTCT------AGAA---------CTGGAAGTTATTTT------------TAGGAGAGA-CTGAAAAACTGTTCATTAAGAATTATAAGACATGT-------------------------------------TTCTGGTTT---CTAAGAGGAGTTTGttaatcagcgttctcc------agagaaacaaaaccaat-- i calJac3.chr3 C 0 C 0 s mm10.chr8 84753464 975 - 129401213 AAGGACTGTGAACT-ATGGAGCAGTAATTTCAACCAGTCTAGTAAGATTGC-----TTAGTTTATTACCTAGGTACCTTTGAG-----AAAGTGTGGGCTCATAAATGTTTTGTAGTT-ACACTTGACATTATAGAA-TTGCTCCCACATGAGATTCCTAAGTAGTTCCTACCATATATAATGTTTGGTAACAAGATATTAATGCCATCA--AGAAACATAAGCAAGAAAAGAAACCAGTGCTATTAGGTAACCATAGTTAATAATGAA-ATATGAGTATTTTCTATAGAAAGTGGCTTATTTGGAGTTACAGTCACACTTTTGTATGGTTGTCAGTCTTTTTACAAGATGCCACATTTTAAACTGGGCTAT---TAATCCCATTTTGTCTGCATTTCAGACTCATTTTTACAATGTGAAATT-----GAAACATACATTTATCAAATATCACCCACAATGGCATTGGTTTAGCATTGctttttttcctctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttGGGACATTGGAATTTT-GTTGCAAGATCAGAATGAGAAC------------ACAGCTCATTTCTCTTTGTGTGAAGCTTTAAGTGGGTGACTTAGA-CTACTCAGAACAAT-TCTATAATGAATTTTCTTTCCCT-TTCTTTTTCTTTATCTCCAGACCTTTTAATAAGTATGCCTTCATTTTTTTA-TCTGTGGTTTTAAAACGTAAATCCCCATTGAAATGTTAAATTTTGCTGCCAGCTCTTTAGCCCAGTGTGGGAAAAAATGATCTTGCTTTGGTCTGAACACAGAAACAATTTGCTCAGAAATTATTTT-AACTCAAGTTGTAAGA-AAA-GTGTAGAAATGTTCCCTAAAAATTAAAGCAGattttattttattttattttattttattttattttattttattttattttTTGCTATGAAGAGTGTGTT----AGAATTCTCCATAGAAAGAGAAACAAAACCAAT-- i mm10.chr8 C 0 C 0 s canFam3.chr16 15757816 884 - 59632846 AAAAGGCTTGAAATTAAGAAGAAACAATTTATAT-AGTCTAGTAAGA-CACTTACTTTAGCTTATTACCCAGGTATCTTCGAGAAGGAAAAGAGTGGGCTCATAAATGTTACGTAGTT-ACATGTTCAATCAGAGAA-CATCTCCCATATGAGATCCCTAAGCGCTTCTTCCAATCTATATTGTTCCGTAAT-AAATGTAAATGACAACAGTAGCAACG---ACAATAATAGGGCCCAGGGCCACTTAATAACTATTGTTAATAACAAA-TTACAAGAGTTTTCCAAAGAAAGCGGCTTATTAAGAATTGCAGTCACAC-TTGATATGGTCATCAGCCATTTTTCAAAATGCCACATTTCAAGTAGAGCTATTAATAATCCCATTTCTTGGGTATTTCAATCTCA-TTTCACAATGCAAAATTGCTAAGAGACACACATTTATCAAATATGTTCCATAATATTACTTGCTTGGCATTA---------------------------------------------------------------CTTCCCTCAGTGCATCGTATTTTT-GTTATGCGATCAATGTAAGTGTCTTCTCTCTAGAGAAGGCAGCTAAATCCTTTGCTTAGTTTGAAGTGGGTGACTTAAAGCCATTTACAAAAATCCCTCTGGTTACTTTTCTTTCCCCATCGTCCTTCCTTATCCTCAGACCCTTTTATAAATAAACTTGTTTCTTC-CTGTCTGTGGCCTCAGAACATGAATGCTTATGGGACCATCAGATTTACTTAGTAGCTGTTTATATTAATG---AACAAGGTGACCTTGGTTTGGTCT------GGAC---------CTGGAAATGGTTTTGAACCTGAGTT-GAGGAGAGACCTGAAAACCTACTTATTAAAAATGAGAAGAAATGG-------------------------------------TTTTGCTTT---CTAAGAGGAGtatttcatccagggttctcc------agagaaacagaaccaatag i canFam3.chr16 I 441 I 580 a score=128000.000000 s hg38.chr4_KI270785v1_alt 85772 78 + 119912 agagagagagagaaagagaaagagagagagagagagagagagagaga----------------gagagtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg s panTro4.chr4 190353096 86 + 193495092 agagagagagagaaagagaaagagagagagagagagagagagagagagtgtg--------tgtgtgtgtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195327135 64 + 198332218 agagagagag----------agagagaaagagaaagagagagagaga--------------------gtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111289744 88 + 115148730 agagagagagaggaagagaaagagagagagagagagagaAtgtgtgtgtgtg------tctgtgtgtgtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181091911 94 + 184069350 agagagagagagagagagagagagagagagagacagaaagactgagtgtgtgGTTTTTtgtgtgtgtgtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186430256 88 + 189454096 --agagagagagagagagagagagagagagagacagaaagactgagtgtgtg----tttttgtgtgtgtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176045041 60 + 178775436 --------------agagagagagagagagagacagagagactgagtgtgtg--------------------tgtgtgtgtgtg------------------------------tgtgtgtgtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132887502 90 + 135778131 --agagagagagagaaagagagagagagagagaCAGAAAGACTGAgtgtgtg--tttgtgtgtgtgtgtgtgtctgtgtgtgtg------------------------------tgtgtgtgtg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188272750 44 - 190850796 ------------------------------------------agggtgtgtg--------tgtgtgtgtgtgtgtgtgtgtgtg------------------------------tgtgtgtgtg i calJac3.chr3 C 0 C 0 s mm10.chr8 84754439 74 - 129401213 ------------------------------------------AAGGTACATG--------TGTGTGTCTCTGTGTGCATGTGTGTTGTATAAAATATAATCAACTTCATACACCTACATGTAAG i mm10.chr8 C 0 C 0 e canFam3.chr16 15758700 580 - 59632846 I a score=2110123.000000 s hg38.chr4_KI270785v1_alt 85850 610 + 119912 t-ATCTTTGAGGGATATATTCCTCTTGTCCTGAAAAATCATTCCATA--GTTATATGTAGA-GAGATTCTGGTCTAGAATGGAGAAGTCTGAAGTTATGGCCCCAGAGGACTACACCGTCCTGCTCTACTA-TTGTTAAAGGCtgtccctgcaggttttgtttcctttggagaa--ctgcttgttttc-aaaatctaaatttatactgccatgagtat-------tttaattattgcttgtccttggaaggtttatatgtgggttgtCTGTGTAGGAAGTGTTTTGAGCCTTTGCTCATTGGAATTTGGGAGCCAAGGAAGGGACGTACACCA-TGGAGTGGCTTGGAGGTAGTTGAGGAGCTATGCAGACAGGGGAAGGAGAGTGGTGGTGCTGGGACTGTGCAGTCATTTTAAGTTATTCTGTGTGTTATGTTCCCCCATTATTATGGAAACTGTAGCAGATCCCCTTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCATGGGAAAGCCATTCCCTCGACAAAATCACAGTGAGTACAtgttatggactgaatgcctatgtacccccaaaattcatatgttgaaatcctaaccctaaaattaatggtattaggagatggggtctt s panTro4.chr4 190353182 611 + 193495092 t-ATCTTTGAGGGATATATTCCTCTTGTCCTGAAAAATCATTCCATA--GTTATATGTAGAGGAGATTCTGGTCTAGAATGGAGAAGTCTGAAGTTATGGCCCCAGAGGACTACACCGTCCTGCTCTACTA-TTGTTAAAGGCtgaccctgcaggttttgtttcctttggagaa--ctgcttgttttc-aaaatctaaatttatactgccatgagtat-------tttaactattgcttgttcttggaaggtttatatgtgggttgtctgtctaggaagtgttttgagcctttgctcattggaatttggGAGCCAAGGAAGGGATGTACACCA-TGGAGTGGCTTGGAGGTAGTTGAGGAGCTATGCAGACAGGGGAAGGAGAGTGGTGGTGCTGGGACTGTGCAGTCATTTTAAGTTATTCTGTGTGTTATGTTCCCCCATTATTATGGAAACTGTAGCAGATCCCCTTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCATGGGAAAGCCATTCCCTCGACAAAATCACAGTGAGTACAtgttatggactgaatgcctatgtacccccaaaattcatatgttgaaatcctaaccctaaaattaatggtattaggagatggggtctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195327199 612 + 198332218 T-ATCTTTGAGGGATATATTCCTCTTGTCCTGGAAAATCATTCCATA--GTTATATGTAGAGGAGATTCTGGTCTAGAATGGAGAAGTCTGAAGTTATAGCCCCAGAGGACTACACTGTCCTGCTCTACTATTTGTTAAAGGCTGTCCCTGCAGGTTTTGTTTCCTTTGGAGAA--CTGCTTGTTTTC-AAAATCTAAATTTATGCTGCTATGAGTAT-------TTTAATTATTGCTTGTCCTTGGAAGGTTTATATGTGGGTTGTCTGTCTAGGAAGTGTTTTGAGCCTTTGCTCATTGGAGGTTGGGAGCCAAGGAAGGGACATACACCA-TGGAGTTGCTTGGAGGTAGTCGAGGAGCTATGCAGACAGGGGAAGGAGAATGGTGGTGCTGGGACTGTGCAGTCATTGTAAGTTTTTCTGTGTGTTATGTTCCCCCATTGTTATGGAAACTCTAGCAGATCCCCTTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCATGGGAAAGCCATTCCCTCGACAAAATCACAGTGAGTACAtgttatggactgagtgcttatgtacccccaaaattcatatgttgaaatcctaaccctaaaattaatggtattaggagatggggtctt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111289832 610 + 115148730 t-ATCTTTGAGGGATATATTCCTCTTGTCCTGGAAAATCATTCCATA--GTTATATGTAGAGGAGATTCTGGTCT-GAATGGAGAAGTCTGAAGTTATGGCCCCAAAGGACTGCACTGTCCTGCTCTAATA-TTGTTAAAGGCCgcccctgcaggttttgtttcctttggagaa--ctccttgttttc-aaaatctaaatttatactgccatgagtat-------tttaattattgcttgcccttggaaggtttatatgtgggttgtctgtctaggaaatgttttgagcctttgctcattggaggttggGAGCCAAGGAAGGGACGTACACCA-TGGAGTTGCTTGGAGGTAGTCGAGGAGCTATGCAGACAGGGGAAGGAGAATGGTGATGCTGGGACTGTGCAGTCATTGTAAGTTATTCTGTGTGTTATGTTCCCCCACTATTATGGAAACTCTAGCAGATCCCCTTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCATGGGAAAGCCATTCCCTCAACAAAATCACAGTGAGTACAtgttatggactgaatgcttatgtacccccaaaattcatatgttgaaatcctaaccctaaaattaatggtattaggagatggggactt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181092005 609 + 184069350 t-gtCTTTGGGGGATATATTCCTCTTGTCCTGGAAAATCATTCTATA--GTTATGTGTAGAGGAGATTCTGGTCCGGAATGGAGAAGTCTGAAGTTATGGCCCCAGAGGACTAAACTGTCCTGCTCTATGA-TTGTTAAAGGCtgtctctgcaggttttgtttcctttggagaa--ctgcttgttttc-aaaatctaaatttatactgccacaagtat-------tttaattattgcttgtccttggaaagtttgtgtgTGGGTTGTCCATCTAGGAAATGTTTTGAGCCTTTGCTCATTGGAGGTTGGGAGCCAAGGAAGGGACGTACACCA-TGGAGTTGCTTTGAGGTAGTCGAGGAGCTACACCGACAGGGGAAGGGGAATGGTGGTGCTGGGACTGTGCAGTCACTGTAAGTTATTC--TGTGTTATGTTCCCCCGTTATTATGGAAACTCTAGCAGATCCCATTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCTTGGGAAAGCCATTCCCTTGACAACACCGTAGTGAGTACAtgttatggactgaatgcttatgtacccccaaaattcatatgttgaaatcctaaccctaaaactaatgttactaggagatgggacctt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186430344 609 + 189454096 t-gtctttgggggatatattCCTCTTGTCCTGGAAAATCATTCTATA--GTTATGTGTAGAGGAGATTCTGGTCCGGAATGGAGAAGTCTGAAGTTATGGCCCCAGAGGACTAAACTGTCCTGCTCTATGA-TTGTTAAAGGCtgtctctgcaggttttgtttcctttggagaa--ctgcttgttttc-aaaatctaaatttatactgccacgagtat-------tttaattattgcttgtccttggaaagtttgtgtgtgggttgtccatctaggaaatgttttgagcctttgctcattggaggttggGAGCCAAGGAAGGGACGTACACCA-TGGAGTTGCTTTGAGGTAGTCGAGGAGCTACGCCGACAGGGGAAGGGGAATGGTGGTGCTGGGACTGTGCAGTCACTGTAAGTTATTC--TGTGTTATGTTCCCCCGTTATTATGGAAACTCTAGCAGATCCCATTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCTTGGGAAAGCCATTCCCTTGACAACACCGTAGTGAGTACAtgttatggactgaatgcttatgtacccccaaaattcatatgttgaaatcctaaccctaaaactaatgttactaggagatgggacctt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176045101 611 + 178775436 t-gtctttggggGATATATTCCTCTTGTCCTGGAAAATCATTCCATA--GTTATGTGTAGAGGAGATTCCGGTCCGGAATGGAGAAGTCTGAAGTTATGGACTCAGAGGACTAAACTGTCCTGCTCTATTA-TTGTTAAAGGCTGTCTCTGCAGGTTTTGTTTCCTTTGGAGAA--CTGCTTGTTTTC-AAAATCTAAATTTATACTGCCACGAGTAT-------TTTAATTATTGCTTGTCCTTGGAAAGTTTGTATGTGGGTTGTCCATCTAGGAAATGTTTTGAGCCTTTGCTCATTGGAGGTTGGGAGCCAAGGAAGGGACGTACACCA-TGGAGTTGCTTTGAGGTAGTCGAGGAGCTACGCCGACAGGGGAAGGGGAATGGTGGTGCTGGGACTGTGCAGTCACGGTAAGTTATTCTGTGTGTTATGTTCCCCCGTTATTATGGAAACTCTAGCAGACCCCCTTAGAAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCTTGGGAAAGCCATTCCCTTGACAACACCGTAGTGAGTacatgttatggactgaatgcttATGTACCCcgaaaattcatatgttgaaatcctaaccctaaAACTAATGTTACTAGGAGATGGGACCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132887592 610 + 135778131 t-gtCTTTGGGGGATATATTCCTCTTGTCCTGGAAAATCATTCCATA--GTTATGTGTAGAGGAGATTCCGGTCCAGAACGGAGAAGTCTGAAGTTATGGACCCAGAGGACTAAACTGTCCTGCTCTATTA-TTGTTAAAGGCtgtctctgcaggttttgttacctttggagaa--ctgcttgttttg-aaaatctaaatttatactgccacgaatat-------tttaattattgc-tgtccttggaaagtttgtgtgTGGATTGTCCATCTAGGAAATGTTTTGAGCCTTTGCTCATTGGAGGTTGGGAGCCAAGGAAGGGACGTACACCA-TGGAGTTGCTTGGAGGTAGTCGAGGAGCTGTGCCGACAGGCGAAGGGGAATGGTGGTGCTGGGACTGTGCAGTCATTGTAAGTTATTCTGTGTGTTTTGTTCCCCCGTTATTATGGAAACTCTAGCAGACCCCCTTAGAAATTACAGCCCCATCTCCG---------------------------------------------ATAGTCCTTGGGAAAGCCATTCCCTTGACGACATCATAGTGAGTACGtgttatggactgaatgcttatgtacccccaaaattcatatgttgaaatcctaaccctaaaactaatgttattaggagatggggcctt i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188272794 608 - 190850796 t-atctttgagaaatatatTCCTCTTGTCCTGGAAGATGCTTTCATA--GTTA-ACATAGAGGAGATTCAGGTCTGGAGTGGAAAAGTCTGAAGTTACGGCCCCAGAGGACTAAGCTGGCCTGCTCCGCTA-TTGGTAAAGGCTGTCTCTGCAGCTTTTGTTTCCTTTGGAGAA--CTGCTTGTTTTCAAAAATCTAAATTTACACTGCCACGAGTAT-------TTTAATTATTGTTTGTCCTTGGAAGGTTTATATGTGGGTTGTCTGTCTAGGAAATGTTTCGAGCCTTTGCTCACTGGAGGTTGGGAGCCAAGGAAGGGACGT-CACCA-TGGAGTTGCTTGG-GGTAGTCGAGGAGCTATGCAGACAGGGGAACGGGAATGGTGGTGCTGGGACTGTACGGTCCTTGTACGTTATTCTGAGTGTTATGTT-CCCCATTATTTTGGAAACTCTAGAAGATCCTCTTAGTAATAACAGCCCCATCTCTG---------------------------------------------ATAGTCCATGGGAAAACTGTTCTCTCGACAAAATCACAGTGAGTACAtgttatggactgaatgcttatgtaccccccaaattcttatattgaaatcccaaccctagtagcaatggtgttaggaggtggggcctt i calJac3.chr3 C 0 C 0 s mm10.chr8 84754513 579 - 129401213 TAATTCTTGGAAACTATTTTTCTTTTGTTCTTGAAAGCTATTTTATCTTATTTTATGTCCT-GAAATTCTAGACTCAAATGTTCAAG-CTGAAGCTGTG------AAGAGCCAACCTGCTTTGCTTTCTCA-TTGCTATAAActttgcccatagattctgtttcctggagagaaatctgtttgtattc-ataatctagatttagactgccttatgtatcttgttatttctttctttcttgttctgggaaggcttatgt-----ttttctgcctaggacatgctttgagcaattgtctatgggagcttggaagccaagatggggatgcacaagagtaggacTGCTCAGAGATCATCTAGGAGTTACCTAG--------AGAAGAATGTCTGTCTTGGGTTAGTGCAGTTCTTAAAAATTACCC----CGTTACCTTCATCATTTCTCATGGAAAGTCT-TCCTACTGCCTTAGTAATAACAGTCTCATCT-------------------------------------------------TAGTCC------------TTCTCTC-ACCAAAGCAGAAAAACTTCAtgctattagctaaatatgtccattttctc-aaattcccaccttgcaattccaatccatagtgcaatga-attaagggataggtcctt i mm10.chr8 C 0 C 0 s canFam3.chr16 15759280 579 - 59632846 T-ATCTTTGAAGGATATTTTCCTCTTACCCTAGAAAACC-TTTTATA--GTTATAA--CGAGAAAATTCTGGTCTGGAATGGAGAAGTCCGAAGTTATGGCTTCGGAAAACTAAACTGCTCTGAATTCTT--TTGTTAAAGGTCAtctctacagcttttgcttccttctgagaa------ttgttttc-aaaatctagatttaggcagtcatatgtat-------tttcattattgcttgttcttggaaggtctatgtgtgGGTTATCCATCTAGG----------------------------------------------------------TAAGGT-ACTTGTTGATAGGCTAGGAACTGTGCAGAGAGCGAAGGGTGG--------GATGGGCCTGTGCAGTCTTCATAAGTCATCCTTTGGGTTACTTTCCACTGTTATTGTGGAAATTTCAGCAGATCC--TTACACACAACAGCCCTTTGTCTGTTGCACTCTGGAAGATTAAGATGGAAGGGCCACACTAGAGTGGGAAGAGTCTATGTGAAAGCTATCCTCCCCATGGAAGTAGGGTGGGTACAtgatatgggctgaatgtttgtgt-tctccaaaaatcatatgctgaaattctaactcccaatgtgatggtcctaggagatgagacctt i canFam3.chr16 I 580 I 909 a score=53189.000000 s hg38.chr4_KI270785v1_alt 86460 18 + 119912 ag-taggt--ttaggtcatga s panTro4.chr4 190353793 18 + 193495092 ag-taggt--ttaggtcatga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195327811 18 + 198332218 ag-taggt--ttaggtcatga i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111290442 18 + 115148730 ag-taggt--ttaggtcatga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181092614 20 + 184069350 ag-taggtcattaggtcataa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186430953 20 + 189454096 ag-taggtcattaggtcataa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176045712 20 + 178775436 AG-TAGGTCATTAGGTCATAa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132888202 20 + 135778131 ag-taggtcattaggtcataa i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188273402 20 - 190850796 ag-taggtcattaggtcataa i calJac3.chr3 C 0 C 0 s mm10.chr8 84755092 21 - 129401213 tgagagataattatgtcatga i mm10.chr8 C 0 I 2963 e canFam3.chr16 15759859 909 - 59632846 I a score=2979382.000000 s hg38.chr4_KI270785v1_alt 86478 997 + 119912 gagtggagacctcatgaatggaattcgtgcccgtataagaagagacatgagaacttgcttc----ctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccagaaagcaggctcttatcagacgtgggatctgccagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtttaa----cctcccaagtctatggtaatttgttatagcagctggaacTAAGATGGTGTTGCCATGGTGATTACAAGTGGGGCAAATGAattcatgcatttaacaaatgtttactgagcctctactctgtgctagATGCAGCAGAGAGGGAGCTTGGAATaaaatagagcaggaagtgctagccagagcagtttggcaagagaaagaaataagaggcctccaaataagaagagaagaaatcaaactatctccctttattcatgacatgattgtcttcttagaaaaccctacaggctctgccaaatgctactagaactgataaatgattttagcaaggttttgggatacaaaatcaatatataaaaatcagtagcatttctatacaccgataacagccaggctgagcgtcaaatcaagaatccaatcctatttacaatagccacaaagaaaatgaaatatctaggaatatagctaaccaaggaggtgaaacatctctgcagggagaactacaaaacactgctgaaagaaatcagagatgatgcaaataaatggaaaaacatttcatgctcatgaactggaagaatcaatgttgttaaatgaccgtactactcaaagcaatttacagattcaacactattcctatcaaatgatcaatgttgttctccacagaattag------aaaaaaccattctaaaattcatatgcagccaaaagagttgaatagtcagagaaatcctaagtaaaaagaacaaagccagagacattatactacctgacttaaaactatactataaggctaca s panTro4.chr4 190353811 993 + 193495092 gagtggagacctcatgaatggaattcgtgcccgtataagaagagacatgacaacttgcttc----ctctgttctctttcccatgagaacacagtgagaagacagctagtcacctgtaaaccaggaagcaggctcttatcagacgtgggatctgccagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtttaa----ccccccaagtctatggtaatttgttatagcagctggagcTAAGATGGTGTTGCCATGGTGATTACAAGTGGGGCAAATGAattcatgcatttaacaaatgtttactgagcctctactctgtgctagATGCAGCAGAGAGGCAGCTTGGAATAAaacagagcaggaagtgctagccagagcagtttggcaagagaaagaaataagaggcctccaaataagaagagaagaaatcaaactatctccctttattcatgacatgattgtcttcttagaaaaccctacaggttctgccaaaggctactagaactgataaatgattttagcaaggtttcgggatacaaaatcaatatataaaaatcagtagcatttctatacaccaataa----caggctgagtgtcaaatcaagaatccaatcctatttacaatagccacaaagaaaatgaaatatctaggaatatagctaaccaaggaggtgaaacatctctgcagggagaactacaaaacactgctggaagaaatcagagatgatgcaaataaatggaaaaacatttcatgctcatgaattggaagaatcaatgttgttaaatgaccatactactcaaagcaatttacagattcaacactattcctatcaaatgatcaatgttgttctccacagaattag------aaaaaaccattctaaaattcatatgcaaccaaaagagttgaatagtcagagaaatcctaagtaaaaagaacaaagccagagacattatactacctgacttaaaactatgctataaggctaca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195327829 995 + 198332218 gagtggagccctcatgaatggaattcgtgcccatacaagaagagacatgagaacttgcttc----ctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccaggaagcaggctcttatcagacgtgggatctgccagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtttaa----ccccccaagtctatggtaatttgttatagcagctggaacTAAGATGGTGTTGCCGTGGTGATTACAAGTGGGGCAAATGAattcatgcatttaacaaatgtttactgagcctctactctgtgctagatacAGCAGAGCGGCAGCTTGGAATaaaatagagcaggaagtgctagccagagcaatttggcaagagaaagaaataagaggcctccaaataaggaaagaagaaatcaaactatctctctttattaatgatatgattctcttcttagaaaaccctacaggctctgccaaaggctactagaactgataaatgattttagcaaggtttcgggatacaaaatcaatatataaaaatcagtagcatttctatacaccaataacagccaggctgagtgtcaaatcaagaatccaatcctatttacaatagccacaaagaaaatgaaatatctaggaatacagctaaccaagggggtaaaacatctctacagggagaactacaaaacactgctgaaagaaatcagagatgatgcaaataaatggaaaaacatgtcatgctcatgaattggaagaatcaatgttgttaaatgactgtactacccaaagcaatttacagattcaacactattcctatcaaatgatcaatgttattctccacagaattag------aaaaaaccattctaaaattcatatgcaaccaaaagagttgaatagtcaaagaaatcctaagtaaaaagaacaaagccagagacattatactacctgacttaaaacta--ctataaggctaca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111290460 998 + 115148730 gagtggagccctcatgaatggaattagtgcccttataagaagagacataagaacttgcctcctctctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccagaaggcaggctcttatcag-tgtgagatctgctagcagcttgatcttggacttcctagcctcaaggactgtgaaaaataaatgttgtttaa----ccccccaagtctatggtaatttgttatagcagctggaacTAAGATGGTGTTGCCATGGTGATTACAAGTGGGGCAAATGAattcatgcattgaacaaatgtttactgagcctctactctgtgctagatacAGCAGAGAGGCAGCTTGGAATaaaatagagcaggaagtgctagccagagcaatttggcaagagaaagaaat--gaggcatccaaataaggaaagaaaaaatcaaactatctctctttattaatgatatgattctcttcttagaaaaccctacaggctctgccaaaggctactagaactgataaatgattttagcaaggtttcaggatacaaaatcaatatataaaaatcagtagcatttctatacaccaataacagccaggctgagtgtcaaatcaagaatccaatcccatttacaatagccacaaagaaaatgaaataccaaggaatatagctaaccaaggaggtgaaacatctctacaaggagaactacaaaacactgctgaaagaaatcagagatgatgcaaataagtggaaaaacatttcatgctcatgaattggaagaatcaatgttgttaaatgactgtactacccaaagcaatttatagattcaacactattcctatcaaatgatcaatgttattctccacagaattag------aaaaaaccattctaaaattcatatacaaccaaaagagttgaatagtcaaagaaatcctaagtagaaagaacaaagccatagacattatactacctgacttaaaactatactataaggctaca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181092634 1001 + 184069350 gagtagagccctcatgaatggaattagtgcccttataagaagagacatgagaacttgcttcctctctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccaggaagcaggctcttatcagacaagggatgtgctagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtctaa-----ccccccagtctatggtaatttgttatagcagctggaactaagacGGTGTTGCCATAGTGATTACAAGTGAGGCAAATGAattcatgcattgaacaaatttttactgagcctccactctgtgctagatacagcagagaggcagcttggaataaaacggAGCAggaagtgctagccagagcaatttggcaagagaaagaaataagaggcgtccaaataaggaaagaagaaatcaaactatctctctttattaatgatatgattctcttcttagaaaactgtacaggctctgccaaaggctactagaattgataaatgattttagcaaggtttcgggatagaaaatcaatatataaaaatcagtagcatttctatacaccaataacagccaggctgagtgtcaaatcaagaatccaatgccatttacaatagccacaaaaataatgaaatacctaggaatacagctaaccaaggaggtgaaacatctctacaaggagaactacaaaacactgctggaagaaattagagatgatgcaaataaatggaaaaacattccatgctcatgaattggaagaatcaatgttgttaaatgaccgcactacccaaagcaatttacagattcaacactattcctataaaatgatcaatgtcatccttcacagaattag-----aaaaaaactattctaaaattcatatacaaccaaaagagttgagtagtcaaagaaatcctaagtaaaaagaacaaagccagagatattatactacctgacttaaaactatactataaggctaca i rheMac3.chr5 C 0 I 20 s macFas5.chr5 186430973 1001 + 189454096 gagtagagccctcatgaatggaattagtgcccttataagaagagacatgagaacttgcttcctctctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccaggaagcaggctcttatcagacaagggatgtgctagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtctaa-----ccccccagtctatggtaatttgttatagcagctggaactaagacGGTGTTGCCATAGTGATTACAAGTGAGGCAAATGAattcatgcattgaacaaatttttactgagcctccactctgtgctagatacagcagagaggcagcttggaataaaacggAGCAggaagtgctagccagagcaatttggcaagagaaagaaataagaggcgtccaaataaggaaagaagaaatcaaactatctctctttattaatgatatgattctcttcttagaaaactgtacaggctctgccaaaggctactagaattgataaatgattttagcaaggtttcgggatagaaaatcaatatataaaaatcagtagcatttctatacaccaataacagccaggctgagtgtcaaatcaagaatccaatgccatttacaatagccacaaaaataatgaaatacctaggaatacagctaaccaaggaggtgaaacatctctacaaggagaactacaaaacactgctggaagaaattagagatgatgcaaataaatggaaaaacattccatgctcatgaattggaagaatcaatgttgttaaatgaccgtaatacccaaagcaatttacagattcaacactattcctatcaaatgatcaatgtcatccttcacagaattag-----aaaaaaactattctaaaattcatatacaaccaaaagagttgagtagtcaaagaaatcctaagtaaaaagaacaaagccagagatattatactacctgacttaaaactatactataaggctaca i macFas5.chr5 C 0 I 20 s papAnu2.chr5 176045732 1001 + 178775436 gagtagagccctcatgaatggaattagtgcccttataagaagagacatgagaacttgcttcctctctctgttctctttcccatgagaacacagtgagaagacagccagTCACCTGTAAACCAGGAAGCAGGCTCTTATCAGACAAGGGAtgtgctagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtttaa-----ccccccagtctatggtaatttgttatagcagctggaACTAAGACGGTGTTGCCATAGTGATTACAAGTGAGGCAAATGAATTCATGCATTGAACAAATTTTTACTGAGCCTCCACTCTGTGCTAGATACAGCAGAGAGGCAGCTTGGAACAAAACAGAGCAggaagtgctagccagagcaatttggcaagagaaagaaataagaggcgtccaaataaggaaagaagaaatcaaactatctctctttatTAATGATATGATTCTCTTCTTAGAAAACTCTACAGGCTCTGCCAAAGGCTACTAGAATTGATAAATGATTTTAGCAAGGTTTCGggatagaaaatcaatatataaaaatcagtagcatttctatacaccaataacagctAGGCTGAGTGTCAAATCAAGAATccaatgccatttacaatagccacaaaaataatgaaatacctaggaatacagctaaccaaggaggtgaaacatctctacaaggagaactacaaaacactgctggaagAAATTAGAGACgatgcaaataaatggaaaaacattccatgctcatgaattggaagaatcaatgttgttaaatgaccgtactacccaaagcaatttacagattcaacactattcctatcaaatgaTCAATGTcatccttcacagaattag-----aaaaaaactattctaaaattcatatacaaCCAAAAGAGTTGAGTAGTCAAagaaatcctaagtaaaaagaacaaagccagagataTTATActacctgacttaaaactatactataaggctaca i papAnu2.chr5 C 0 I 42 s chlSab2.chr7 132888222 992 + 135778131 gagtggagccctcatgaatggaattagtgcccttataagaagagacatgagaacttgcttcctctctctgttctctttcccatgagaacacagtgagaagacagccagtcacctgtaaaccaggaagcagactcttatcagacatgggatgtgctagcaccttgatcttggacttcccagcctcaaggactgtgaaaaataaatgttgtttaa----cccccccagtctatggtaatttgttacagcagctggaactaagacGGTGTTGCCATAGTGATTACAAGTGGGGCAAATGAattcatgcattgaacaaatgtttactgagcctccactctgtgctagatacAACAGAGAGGCAGCTTGGAATAAAACGGAGCAggaagtgctagccagagcaatttggcaagagaaagaaataagaggcatccaaataaggaaagaagaaatcaaactatctctctttattaatgatatgattctcttcttagaaaaccgtgcaggctctgccaaaggctactagaactgataaatgactttagcaaggtttcgggatagaaaatcaatatataaaaatcagtagcatttctatacaccaataacagccaggctgagtgtcaaatcaagaatccaatgccatttacaatagccacaaaaataatgaaatacctaggaatatagctaaccaaggaggtgaaacatctctacaaggagaactacaaaacactgctggaagaaattagagatgatgcaaataaatggcaaaacattccatgcttatgaattggaagaatcaatgttgttaaatgaccgtactacccaaagcaatttacagattcaacactattcctatcaaatgatcaatgtcattcttcacagaattag-----aaaaaaactattctaaaattcatatacaaccaaaaaagttgaatagtcaaagaaatcctaagtaaaaagaacaaagccagagatattatactacctgacttaaaactatacta---------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188273422 1000 - 190850796 gaggagagccctcataaatggaattagtagccttataagaagagacctgagagcttgcttcatttctctgttctcttttccatgagaacacagtgaaaagacagccagccgcctgtaaactgagaagcaggctcttatcagacatgagatctgctagcaccttggtcttggacatgccagccttgaagactgtca-----agatgttgattaagccccccccccagtctgtagtaatttgttatagcagctggaacGCAGATGGTGTTGCCATAGTGATTACAAGTGGGGCAGATGAattcatgcatgggacagatgtttactgagcctctactctgtgctggagacAGCAGAGAGGCATCCTGGAATAAACTAGAGCAGTaagtgctggccagagcaatttggcaagagaaagaaagaagaggcatccaagtaaggaaagaagaaatcaaactgtctctctttattcaagatattaatctcgtctcagaaaaccctacaggctctgccagaagctgctagaactgatacataattttaacaagatttcgggatacaaaatcaataaacaaaaatcaggagcacttctatgagccaataacagccaggctgactgtcaaatccagaacgcaatgccatttacaaaggccacaaagaaaacgacataggtaggaatacagctgaccaaggatgtgaaacatctctgcaaggagaactaggaaatactgtcgaaagagatcagaggtgatgcaagtaaatgggaaaacat-ccatgctcatggattggaagaatcaacactgttaaatgactatgctatccaaagcaatttacagattcaacactattcctatcaaatgatcaatgtcattc-ccacggaattagaaaaaaaaaaaactattctaaaattcacacacaaccaaaagagttgaatagtc----aaatcctgagtaaaaggaacaaagccagaggcattatactacctgacttaaagctatacttcaaggctaca i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=5850.000000 s hg38.chr4_KI270785v1_alt 87475 5 + 119912 gtaac s panTro4.chr4 190354804 5 + 193495092 gtaac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195328824 5 + 198332218 gtaac i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111291458 5 + 115148730 gtaac i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181093655 5 + 184069350 gctac i rheMac3.chr5 I 20 I 17 s macFas5.chr5 186431994 5 + 189454096 gctac i macFas5.chr5 I 20 I 17 s calJac3.chr3 188274422 5 - 190850796 gtagc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I e chlSab2.chr7 132889214 0 + 135778131 C e papAnu2.chr5 176046733 42 + 178775436 I a score=2545176.000000 s hg38.chr4_KI270785v1_alt 87480 855 + 119912 caaaacagcatgatactggtacaaaaacagacacatagactaagggaacaggat-aaaaaactcagaaataaagccacacacctacagccatctgatcttcaacaaggccaacaaaaataagcaatggggaaagggctttatattcaataaatggtgatgagacaactggctagccatatgcaaaagaatgaaactagtcccttgcctttt-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactataaaaatcctaggagaaaacctgggaaatacctttcttgacattggccttggcaaggtatttttggcttagtccccaaaagcaattgcaacaaaaacaaaaattgacaagtgggagctaattaaacgaaagagcttctgcacagccaaagaaactatcaacagagtaaacagacatcctacaaactatgcagctaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaaaaacaacccaattaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaagacatacaagtggccaagaaacatataaaaaaatcctcactatcactgatgatcagagaaatgcaaattaaaaccacaatgagataccatctcgtatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgaggctacagagaaaagggaatgcttatgtactgttggcaggaatgtaaattagttcaactactgtcaaagaaatccatttggagatttctcaaagaacttaaaacagaactaccatacgacccagccatcccattactgggtatatccccatt s panTro4.chr4 190354809 855 + 193495092 caaaacagcatgatactggtacaaaaacagacacatagactaagggaacagaat-aaaaaactcagaaataaagccacacacctacagccatctgatcttcaacaacgccaacaaaaataagcaatggggaaagggctttatagtcaataaatggtgatgggacaactggctagccatatgcagaagaatgaaactagtcccttgcctttt-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactgtaaaaatcctaggagaaaacctaggaaatacctttcttgacattggccttggcaaggaatttttggcttagtccccaaaagcaattgccacaaaaacaaaaattgacaagtgggagctaattaaacgaaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacatcctacaaactatgcaggtaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaaaaacaacccaattaagcaaaggaaatgaaaaggcatttat--------------------------------------------caaaagaagacatacaagtggccaagaaacatataaaaaaatcctcactatcactgatgatcagagaaatgcaaattaaaaccacaatgagataccatctcgtatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgaggctacagagaaaagggaacgcttatgtactgttggtgggaatgtaaattagttcaactactgccaaagaaatccatttggagatttctcaaaaaacttaaaacagaactaccatatgacccagccatcccattactgggtatatccccatt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195328829 855 + 198332218 caaaacagcatgatactggtacaaaaacagacacatagactaaggaaacagaat-aaaaaactcagaaataaagccacacacctacagccatctgatcttcaacaaggccaacaaaaataagcaatggggaaagggctttatattcaataaatggtgatgggacaactggctagccatatgcggaagaatgaaactagtcccttgccttttaaccaatacaaaaatatggaatgaagatttaaatgtaagacctcacactataaaaatcctagtagaaaacctaggaaatacctttcttgacattggccctggcaaggaatttttggcttagtcccccaaagcaattgcaacagaaacaaaaattgacaaatgggagctaattaaacgaaagagcttctgcacagcaaaagaaactatcaacagag-aaacagacatcctacaaactacgcagctaacaaaggtctagtatccggaatctataaggaacttcaacaaatcaacaagcaaaaaacaacccaattaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaagacatacaagtggccaagaaacatataaaaaaatcctcactatcactgatgatcagagaaatgcaaattaaaaccacaatgagataccatctcgcatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgaggctacagagaaaagggaacgcttatatactgttggtgggaatgtaaattagttcaactactgtcaaagaaatcaatttggagatctctcaaagaacttaaaacagaactaccatacgacccagccatcccattactgggtatattcccact i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111291463 855 + 115148730 caaaacagcatgatactggtaccaaaacagacacatagactaaaggaacagaat-aaaaaactcagaaataaagccacacacctacagccatctgatcttcaataaggccaacaaaaataagcaatggggaaagggctttatattcaataaatggtgatgggacaactggctagccatatgcagaagaatgaaactagacccttgcctttc-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactataaaaatcttaggagaaaacctaggaaatatctttcttgacattggccttggcaaggaatttttggcttagtcccccaaagcaattgcaacaaaaacaaaaattgacaagtgggagctaattaaacgaaagagcttctgcacagcaaaagaaactatcaacagagtaaacagacaacctacaaactatgcagctaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaaaaacaacccaattaagcaagggaaatgaaaaggcatttct--------------------------------------------caaaagaagacatacaagtggccaagaaacatataaaaaaatcctcactatcactgatgatcagagaaatgcaaactaaaaccacagtgagataccatctagcatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgagactacagagaaaagggaacgcttatatactgttggtgggaatgtaaattagttcaactactgtcaaagaaatccatttggagatttctcaaagaacttaaaacagaactaccatacgacctagccatcccgttactgggtatattcccatt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181093677 854 + 184069350 caaagcagcatgatattggtacaaaaacagacacatataataagggaacagaat-aaaaaactcagaaataaagccacacacctacagccatcgggtcttcaacaagaccaacaaaaataaacaatggggaaagggctttatattcaataaatggtgatgggacaactggctagccatatgcagaagaatgaaactagaccattgcctttc-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactataaaaatcctaggagaaaacctaggatatacctttcttgacattggccttggcaaggaatttttagcttagtaccccaaagcaattgcaacaaaaacaaaaattgacaagtgggagctaattaaactaaagagcttctgcacagcaaaagaaactatcaacagagtaaatagacatcctacaaactatgcagctaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaagaacaacccaattaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaaggcatacaagtggctaagaaacatat-aataaatgctcactatcactgatgatcagataaatgcaaattaaaaccacaatgagataccatctcacatcagtcagaatggctattat-taaaaggtcaaaaaataacggatgctggcgagactacagagaaaagggaacgcttatatactgttggtgggaatgtaaattagttcaactactgtcaaagaaatccatttggtgatttctcaaagaacttaaaactgaactaccatacgacccagccatcccattactgggtatatccccatt i rheMac3.chr5 I 17 I 271 s macFas5.chr5 186432016 854 + 189454096 caaagcagcatgatattggtacaaaaacagacacatataataagggaacagaat-aaaaaactcagaaataaagccacacacctacagccatcgggtcttcaacaagaccaacaaaaataaacaatggggaaagggctttatattcaataaatggtgatgggacaactggctagccatatgcagaagaatgaaactagaccgttgcctttc-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactataaaaatcctaggagaaaacctaggatatacctttcttgacattggccttggcaaggaatttttagcttagtaccccaaagcaattgcaacaaaaacaaaaattgacaagtgggagctaattaaactaaagagcttctgcacagcaaaagaaactatcaacagagtaaatagacatcctacaaactatgcagctaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaagaacaacccaattaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaaggcatacaagtggctaagaaacatat-aataaatgctcactatcactgatgatcagataaatgcaaattaaaaccacaatgagataccatctcacatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgagactacagagaaaaggaaacgcttatatactgttggtgggaatgtaaattagttcaactactgtcaaagaaatccatttggtgatttctcaaagaacttaaaactgaactaccatacgacccagccatcccattactgggtatatccccatt i macFas5.chr5 I 17 I 271 s papAnu2.chr5 176046775 855 + 178775436 CAAAGCAGCATGATattggcacaaaaacagacatatataataagggaacagaat-aaaaaactcagaaataaagccacacacctacagccatcggATCTTCAACAAGaccaacaaaaataagcaatggggaaagggctttatattcaataaatggtgacgggacaactggctagccatatgcagaagaatgaaactagaccgtTGCCTTTC-ACCAATACAAAAAGATGGAgtgaagatttaaatgtaagacctcacactataaaaatcctaggagaaaacctaggatATACCTttcttgacattggccttggcaaggAATTTTTAGCTTAGTAccccaaagcaattgcaacaaaaacaaaaattgacaagtgggagctaattaaactaaagagcttctgcacagcaaaagaaactatcaacagagtaaatagacatcCTACAAACTATGCAGCTAACAAAGGTCTAGTATctggaatctataaggaacttcaacaaatcaacaagcaaagaaCAACCCAATtaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaaggcatacaagtgGCTAAGAAACATAT-AATAAATGCTCACTATCACTGAtgatcagataaatgcaaattaaaaccacaatgagataccatctcacatcagtcagaatggctgttataaaaaaggtcaaaaaataacagatgctggtgagactacagagaaaagggaacgcttatatactgttggtgggaatgtaaattagttcaactactgTCAAAGAAATccatttggagatttctcaaagaacttaaaacagaactaccatacgacccagccatcccattactgggtatatccccATT i papAnu2.chr5 I 42 I 271 s chlSab2.chr7 132889214 855 + 135778131 caaagcagcacgatattggtacaaaaacagacacatataataagggaacagaataaaaaaactcagaaataaagccacacacctacagccatcggatcttcaacaaggccaacaaaaataagcaatggggaaagggctttatattcaataaatggtgatgggacaactggctagccatatgcagaagaatgaaactagacccttgcctttc-accaatacaaaaagatggagtgaagatttaaatgtaagacctcacactataaaaatcctaggagaaaacctaggatatacctttcttgacattggccttggcaaggaatttttagcttagtcccccaaagtaattgcaacaaaaacaaaaattgacaagtgagagctaattaaactaaagagcttctgcacagcaaaagaaactatcaacagagtaaatagacatcctacaaactatgcagctaacaaaggtctagtatctggaatctataaggaacttcaacaaatcaacaagcaaagaacaacccaattaagcaaaggaaatgaaaaggcatttct--------------------------------------------caaaagaaggcatacaagtggctaagaaacatac-aaaaaacgctcactatcactgatgatcagagaaatgcaaattaaaaccacaatgagataccatctcacatcagtcagaatggctattat-taaaaggtcaaaaaataacagatgctggcgagactacagagaaaagggaacgcttatttactgttggtgggaatgtaaattagttcaactactgtcaaagaaatccatttggagatttctcaaagaacttaaaacagaactaccatatgacccagccatcccattactgggtatatccccatt i chlSab2.chr7 C 0 I 271 s calJac3.chr3 188274427 883 - 190850796 aaaaacagcacggtactggtacagaaatagacacatagaccaatggaacagaataaaaaaactcagaaataaagtcacacatctacagctatatgatcttcaacaaggccaacaaaaataaccaat-------gggctttatatttaataaataatgatgggacaacgggctagccatatgc---agaatgaaagtagacccttgcctttc-accaatacaaaaagattg-gtgaagatttaaatgtaagacctcaaagtataaaaattctaggaggaaacctgagaaataaccttcttgacagtggccttggcaaggaatttttggataagtcccccaaagcaaatgcaactaaaacaaaacttgacaagtgggagctaattgaactcgagaaatgtttcatagcagaaggaagtatcaacagagtaaacagacgtcctacaaaccatgcagctaacaaaggtctaatatctggaatctataaggaacttcaacaaatcagcaaggaaaaaacaacccaattaagcaaaggaaatgaaaagacatttctcagaagaagatatgcaggtggctaataaatgaaaaaacattccacagaagaagacatacaagtggccaagaaacatat-aaaaaatgctcatcatcaaggatgatcagataaatgcatattaaaaccacaaggagacgtcatctcacatcagtcag--tggccgctat-tcaacagccacgacgtagcagatgctggagaggctacggaagaaagggaacgtgcttctcctgctg---ggaaggtaaattcgttccgctgctgtcaaacaaagccatttagagatttctccaagaactgaaaacagaactaccacacaacccagccatcccattactggctatatccccact i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=3055835.000000 s hg38.chr4_KI270785v1_alt 88335 1098 + 119912 ggaaaatagataaatataccaaagagacacatacacttgtatatttattgccacactatttgcaatagcaaagacataaaatcaacctaggttctcatccctggtgaacaggataaagaaaatatggtacatatccaccgtagaaaactacgcagccataaaaaaag-aatgaagtcatgtcctttgtagcaacacggtgcagctgcaggccacaaccctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacactgagcacacatggacataaacataagaaaaatagacaccagagactattagaggggagagggaaggagcaagtcatggcttgaaaaaccacctattgggcactatgctcactacctgggtgcaatatacccatgtaacaaacctgcatgtgtaccccctataactagaataaaagttgaaattaaaaaaTTAgaacaaaacaaaacaagtacttatcttcatgaag------ttctaatgaggagatatcaatgacaaataaagaaaaaatatgtaaaataaataacaagtgctgaaaaagaaaaacagagtacaggggctagagttctagagaggttctattatagatggagtgatttgggTTGACTGGGATTAATCATCCCAGGATTACATTCCAAGTTCAGAGCTGTTTCTCTTATGCTACCATTCATCTCATTTGTAGTTGGGGAATTTAGTCAGATGGACAAATAATTGCATATC-TTTTTTTAGGGAGAGCTCAACAATGTGACGCTGTTTATGTTGATGCTGTTGAAATAGTGTGTCAGCAAATCCCTGTCTTT----------TTCCCTGTTCAGTGTCCTTAACGGGGGAGGGGATGTTGAAACCTGATCCCTTCCAAGAGTCTAAGGTATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTAAATTTGTCATTTATAGTTTTAACAATTCTTGAGTTATACTATTATATATGTAATAGGTCCTAGTTTGGttttattttacttaaacttacctatgtacacactttta s panTro4.chr4 190355664 1096 + 193495092 ggaaaatagataaatataccaaagagacacatacacttgtatatttattgccccactattcgcaatagcaaagacataaaatcaacctaggtgctcatccctggtgaacaggataaagaaaatatggtacctataaaccgtagaaaactacacagccataaaaaaag-aatgaagtcatgtcctttgtagcaacacggtgcagctgcaggccacaaccctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacactgagcacacatggacataaacataagaaaaatagacaccagagactactagaggggagagggaacgagcaagtcatggcttgaaaaaccacctattgggcactgtgctcactacctgggtgcaatatacccatgtaacaaacctgcatatgtatcccctataactagaataaaagttgaaattaaaaaaTTAgaacaaaacaaaacaagtacttatcttcatgaag------ttctaatgaggagatatcaatgacaaataaagaaaaaatatgtaaaataaataacaagtgctgaaaaagaaaaac--agtacaggggctagagttctagagaggttctattatagatggagtgatttgggTTGACTGGGATTAATCATCCCAGGATTACATTCCAAGTTCAGAGCTGTTTCTGTTATGCTACCATTCATCTCATTTGTAGTTGGGGAATTTAGTCAGATGGACAAATAATTGCATATC-TTTTTTTAGGGAGAGCTCAGCAATGTGACGCTGTTTATGTTGACGCTGTTGAAGTAGTGTGTCAGCAAATCCCTGTCTTT----------TTCCCTGTTCAGTGTCCTTAACGGGGAAGGGGATGTTGAAACCTGATCCCTTCGAAGAGTCTAAGGTATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTAAATTTGTCATTTATAGTTTTAACAATTCTTGAGTTATACTATTATATATGTAATAGGTCCTAGTTTGGttttattttacttaaactcagctatgtacacactttta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195329684 1074 + 198332218 ggaaaatagataattataccaaagagacacatacacttgtatatttattgccacactattcgcaatagcaaagacataaaatcaacct---------------------aggataaagaaaatatggtacatatacaccgtagaaaactacagagccataaaaaaag-agtgaagtcatgtcctttgtagcaacacgatgcagctgcaggccacaatcctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacactgagcacacatggacataaacataagaaaaatagacaccagagactactagaggggagagggaaggagcaaggcatggcttgaaaaaccacctattgggcactatgctcactacctgggttcaatatacccatttaacaaacctgcatatgtgccacctataactagaataaaagttgaaattaaaaaaTTAgaacaaaacaaaacaagtacttatcttcatgaag------ttctaat---gagatatcgatgacaaataaagaaaaaatatgtaaaataaataacaagcgctgaaaaagaaaaacagggtacagaggctagagttctagagaggttctattatagatggagtgatttgggTTGACTGGGATTAATCATCCTAGAATTACATTCCAAGTTCAGAGCTGTTTCTATTATGCTACCATTCATCTCATTTGTACTTGGGGAATTTAGTCAGATGGACAAATAATTGCATATC-TTTTTTTAGGGAGAGCTCAACAATGTGACACTGTTTATGCTGATGCCGTTGAAATAGTGTGTCAGCAAATCCCTGTCTTT----------TTCCCTGTCCAGTGTCCTTAACGGGGGAGGGGATGTTGAAACCTGATCCCTTCAAAAAGTCTAAGGTACAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAACAATATTCCTGTCATGAGCAGAATACACTAAATTTTTCATTTATAGTTTCAACAATTCTTGAGTTATACTATTATATATGTAATAGGTCCTAGTTTGGttttattttacttaaacttacctatgtacacactttta i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111292318 1086 + 115148730 ggaaaatagataattataccaaagagacacatacacttgtatatttattgccacactatttgcaatagcaaagacataaaatcaacctaggtgctcatccctggcgaacgggataaagaaaatatggtacatatacactgtagaaaactacgcagccat----aaag-aatgaagtcatgtcctttgtagcaacacgatgtagctggaggccacaatcctaagtgaatt--------aacggacaaccaaataccacatgttctcacttataagtgagagctaaacattgagcacacagggacataaacataagaaaaatagacaccagagactactagaggggagagggaaggagcaaggcatggcttgaaaaaccacctattgggcactatgctcactacctgggtgcaatatacccatgtaacaaacctgcatatgtaccccctataactaaaataaaagttgaaaTTTAAAAATTAgaacaaaacaaaacaagtacttatcttcatgaag------ttctaatgaggagatatcgatgataaataaagaaaaaatatgtaaagtaaataataagtgctgaaaaagaaaaacagagcacaggggctagagttctagagaggttctattatagatggagtgattcaggTTGGCTGGGATTAATCATCTCAGGATTATATTCCAAGTTCAGAGCTGTTTCTCTTATGCGACCATTCATCTCATTTGTAGTTGGGGAATTTAGTCAGACGGACAAATAATTGCATATC-TTTTTTTAGGGAGAGCTCAACAATGTGCCACTGTTTATGTTGATGCTGTTGAAATAGTGTGTCAGCAAATCCCTGTCTTT----------TTCCCTGTCCAGTGTCCTTAACGGGGGAGGGGATGTTGAAACCTGATCCCTTCAGAGAGTCTAAGGTATAGCCATATAAGCCGGAGTCATACGAATTGGTAGTTGAATCTAATGCTTGTAGCAATACTCCTGTCATGAACAGAATACACTAAATTTGTCATTTGTAGTTTTAACAATTCTTGAGTTATACTATTATATATGAAATAGGTCCTAGTTTGGttttattttacttaaacttacctatgtacacactttca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181094802 1096 + 184069350 ggaaaatagataagtataccaaagagacacatacacttgtatatttattgccccactattaacaatagcaaggacataaaatcaaccgaggtgcttatccctggtgaacgggataaagaaaatgtggtacgtatacgccatagaaaactacacagccacaaaaaaag-aatgaagtcatgtccttggtagcaacacgatgcagctggaggccacaatcctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacattgagcacacgtggacataaacataagaaaaatagacaccagggactaccagaggggagacggaaggagcaaggcatggcttgaaaaaccacctgttgggcactatgctcactacctgggtgcaatacacccatgtgagaaacctgcatatgtaccccctataaccaaagtaaaagttgaaaTTAGAAAATTagaac-aaacaaaacaagtccttttcttcgggaag------ttctaatgaggagatatcgatgataaagaaagaaaaaatatataaagtaaataataaatgttgaaaaagaaaaac--agtacaggggctagagttccagagaggttctattacagatggagtgcttcgggTTGACTGGGATTAATCATCCCAGAATTACATTCCAAGTTCAGAGCTGTTTCTGTTATGCTCCCATTCATCTCATTTGTAGTTGGGGAATTTGGTCAGATGAATACATAATTGCATACCTTTTTTTTAAGGAGAGCTCAGCAATGTGACACTGTTTATGTTGATGCTGTTCAAATAGTGCGTCAGCAAATCCCTGTCTTT----------TCCCCTGTCCAGTGTCCTTAATAGGGGAGGAGATGTTGAAACCTGATCCCTTCAAAGAGTCCAGGGCATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTGAATTTGTCATTTATCATTTTAACAATTCTTGAATTATACTATTATATATGTAATAGGTCCTAGTTTGGTTTTACTTTACTTAAACTTACCTATGTACACACTTTTA i rheMac3.chr5 I 271 C 0 s macFas5.chr5 186433141 1096 + 189454096 ggaaaatagataagtataccaaagagacacatacacttgtatatttattgccccactattaacaatagcaaggacataaaatcaaccgaggtgcttatccctggtgaacgggataaagaaaatgtggtacgtatacaccatagaaaactacacagccacaaaaaaag-aatgaagtcatgtccttggtagcaacacgatgcagctggaggccacaatcctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacattgagcacacgtggacataaacataagaaaaatagacaccagggactaccagaggggagacggaaggagcaaggcatggcttgaaaaaccacctgttgggcactatgctcactacctgggtgcaatacacccatgtgagaaacctgcatatgtaccccctataaccaaagtaaaagttgaaaTTAGAAAATTagaac-aaacaaaacaagtccttttcttcaggaag------ttctaatgaggagatatcgatgataaagaaagaaaaaatatataaagtaaataataaatgctgaaaaagaaaaac--agtacaggggctagagTTCCAGAGAGGTTCTATTACAGATGGAGTGCTTCGGGTTGACTGGGATTAATCATCCCAGAATTACATTCCAAGTTCAGAGCTGTTTCTGTTATGCTCCCATTCATCTCATTTGTAGTTGGGGAATTTGGTCAGATGAATACATAATTGCATACCTTTTTTTTAAGGAGAGCTCAACAATGTGACACTGTTTATGTTGATGCTGTTCAAATAGTGCGTCAGCAAATCCCTGTCTTT----------TCCCCTGTCCAGTGTCCTTAATAGGGGAGGAGATGTTGAAACCTGATCCCTTCAAAGAGTCCAGGGCATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTGAATTTGTCATTTATCATTTTAACAATTCTTGAATTATACTATTATATATGTAATAGGTCCTAGTTTGGTTTTATTTTACTTAAACTTACCTATGTACACACTTTTA i macFas5.chr5 I 271 C 0 s papAnu2.chr5 176047901 1097 + 178775436 GGAAAATAGATAAGTATACCAAAGAGACACATACACTTGTATATTTATTGCcccactattaacaatagcaaggACATAAAATCAACCGAGGTGCTTATCCCTGGTGaacgggataaagaaaatgtggtacgtatacaccatagAAAactacacagccacaaaaaaagaaatgaagtcatgTCCTTGGTAGCAACacgatgcagctggaggccacaatcctaagtaaattaacataggaacagacaaccaaataccacatgttctcacttataagtgggagctaaacattgagcacacgtggacataaacataagaaaaatagaCACCAGGGACTACCAGAGGGGAGACGGAAGGAGCAAGGCATGGCTTGAAAAACCACCTGTTGggcactatgctcactacctgggtgcaaTACACCCATGTGagaaacctgcatatgtaccccctaTAAccaaagtaaaagttgaaattagaaaattagaac-aaacaaaacaagtccTTTTCTTCAGGAAG------TTCTAATGAGGAGATATCGacgataaagaaagaaaaaatatataaagtaaataataaatgctgaaaaagaaaaac--agtacagGGGCTAGAGTTCCAGAGAGGTTCTATTACAGATGGAGTGTTTCGGGTTGGCTGCGATTAATCATCCCAGAATTACATTCCAAGTTCAGAGCTGTTTCTGTTATGCTCCCATTCATCTCATTTGTAGTTGGGGAATTTGGTCAAATGAATACATAATTGCATACCttttttttAAGGAGAGCTCAACAATGTGACACTGTTTATGTTGATGCTGTTCAAATAGTGTGTCAGCAAATCCCTGTCTTT----------TCCCCTGTCCAGTATCCTTAATAGGGGAGGAGATGTTGAAACCTGATCCCTTCAAAGAGTCCAGGGCATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTGAATTtgtcatttatcattttaacaattcttgaattatactattatatatgtaataggtcctagtttggttttattttacttaaacttACCTATGTACACACTTTTA i papAnu2.chr5 I 271 C 0 s chlSab2.chr7 132890340 1095 + 135778131 ggaaaatagataagtataccaaagagacacatacatttgtatatttattgccccactattcacaatagcaaggacataaaatcaaccgaggtgctcatccctggcgaacgggataaagaaaatgtggtacatatacaccatagaaaactacacagccacaaaaaaag-aatgaaatcatgtccttggtagcaacacgatgcagctggaggccacgatcctaagtaaattaacataggaacagacaaccaaatac--tatgttctcacttataagtgggagctaaacattgagcacacatggacataaacataagaaaaat-gacaccagggactaccagaggggagatggaaggagcaaggcatggcttgaaaaaccacctgttgggcactatgctcactacctgggtgcaatacacccatgtgagaaacctgcatatgtaccccctataaccaaagtaaaagttgaaaTTAGAAAAGTagaac-aaacaaaacaagtccttttcttcaggaag------ttctaatgaggagatatcaatgataaagaaagaaaaaatatataaagtaaataataaatgctgaaaaagaaaaacagagtacaggggctagagTTCCAGAGAGGTTCTATTACAGATGGAGTGTTTTGGGTTGACTGGGATTAATCATCCCAGAATTATGTTCCAAGTTCAGAGCTGTTTCTGTTATGCTCCCATTCATCTCATTTGTAGTTGGGGAATTTGGTCAGATGAATACATAATTGCATACCTTTTTTTTAAGGAGAGCTCAACAATGTGACACTGTTTATGTTGATGCTGTTGAAATAGTGCGTCAGCAAATCGCTGTCTTT----------TCCCCTGTCCAGTGTCCTTAATAGGGGAGGAGATGTTGAAACCTGATCCCTTCAAAGAGTCTAGGGCATAGCCATATAAGCCGGAGTCATATGAATTGGTAGTTGAATCTAATGCTTGTAGCAATATTCCTGTCATGAACAGAATACACTGAATTTGTCATTTATCGTTTTAACAATTCTTTAATTATACTATTATATATGTAATAGGTCCTAGTTTGGTTTTATTTTACTTAAACTTACCTATGTACACACTTTTA i chlSab2.chr7 I 271 C 0 s calJac3.chr3 188275310 1013 - 190850796 ggaaaataggtaattataccaaagggacacatacccttgtatgtctattgccaaactacttacaatagcaaagacgtaaaatcagccttggtgcccacccctggtgacctagataaagaaaatgtgctacatatacactgtagaaaactacacagccat-aaaaaag-aatgaaattatgtcctttgtagcaacacaatggagccggaggccacagtcctaagtaaattaacatagaaacagacaaccaaatactgcatgttctcac----aagtgggagctacacattgaggatacatggacatggacagaaggaaaacagacacccggggctgctaga-gggagagggaagcagTA--------------------------------------------------------------------------------------CCTATAACTAAAATGAAAGTCGAAATTTAAAAATTAcagtgaaacaacacaagtacttaccttcgtgaggtgtacattctaatgagtagatacagacgat----aaagaaaaaatacgtaaagtagacaataagcgctgaaaaagataaacggagcacaggggctggcgtgctacagaggTACCGTTACAGATGCAGTGGTTTGCGCCAGCCGGGATTATACATCCCAGGATGACATTCCCAGTCCAGGGCTGTTTCTGCTGTGCTGACATTCATCTCACTTGTATTTTGGGAATTCAGTCAGATGGACAAATAACTGCATACC-TTTTTTTAGG--GAGCTCAACAATGTGACACAGTTCATGTTGAGGCTGTTGAAACAAGGTGTCGACAAGTCCCTGTCTCCGCCCCCCCCGCCCCCTGTGCCCTGTCCTTGATAAGGGAGAAGGTGTTGCAACTTGGTCCCTTCGAAGAGTCCAAGGTGTGGCCATAC---CTGGAGTCATGTGAATTGGTAGTTAAATCTAATGCTTGTAGCAATATGACTGTTATGAACAGAATATACTAAATTGGTCATTTATAGTTTTAACAATTCTTGGATTATGCTATTACATATCTAATAGATCCTAGATTGGttttattttacttaaacttacctatgaacacactttaa i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=393144.000000 s hg38.chr4_KI270785v1_alt 89433 523 + 119912 agaagtaaataattctataaggcttgttacaaaaagcatcagctcctgactgccctacctgctttccttttgctgggaacaacccccttttaactcttagctaa----ttttttttctagttatttattaccatgcctctaattaacaggtttattttgctacttcttaattttta--acagttttttcagtacttcttgacttttttggttttatgtgttaactactgacttcccaaaatgagagctgagaatttgactctctttgtaaccgctttcccctccatccctcttaattcctcatcccaacataaagtaagagtaagtgattttggttggcccacccttggcccaccctgggtatttg-aatatactgtattaggacggcgtaaacattgttaacacctgagccaggtcatatgtatgattttctcatccttttctacactctttaaaaaacccacttgaactagtaactgtttgcttctgttcttggtttagatttgtatgttcttatcgctaatctactc s panTro4.chr4 190356760 514 + 193495092 agaagtaaataattctataaggcttgttacaaaaagcatcagctcctgactgccctacctgcttttcttttgctgggaaaaacccccttttaacccttagccaa----ttttttttctagttatttattaccatgcctctaattaacaggtttattttgctacttcttaatttttaacacaattttttcagtacttcttgacttttttggttttatgtgttaactactgacttcccaaaatgagagctgagaatttaactctctttgtaacctctttcccctccatccctcttaattcctcatcccaacataaagtaagagtaagtgattttgg-----------ttggcccaccctgggtattcg-aatgtactgtattaggaccacgtaaacattgttaacacctgagccaggtcatatgtatgattttctcatccttttctacactctttaaaaaacccacttgaactagtaactgtttgcttttgttcttggtttagatttgtatgttcttattgctattctactc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195330758 514 + 198332218 agaagtaaataattctataaggctcgttacaaaaagcatcagctcctgactgccctacctgcttttcttttgctgggaacaacccccttttaactcttagctaa----ttttttttctagttatttattaccatgcctctaattaacaggtttattttgctacttcttaatttttAACACAGTTTTTTCAAtacttcttgacttttttggttttatgtgttaactactgatttcccaaaatgagagctgagaatttaactctctttgtaacctctttcccctccatccctcttaactcctcatcccaacataaagtaagagtaagtgattttgg-----------ttagcccaccattggtattag-aatgtactgtattaggaccacataaacattgttaacacctgagccaggtcatatgtatgattttctcatccttttctgcactctttaaaaaacccacttgaactagtaactgtttgctttttttcttggtttagatttgtatgttcttatcactaatctactc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111293404 509 + 115148730 agaagtaaataattctataaggcttgttacaaaaagcatcacctcctgactgccctacctgcttttcttttcctgggaacaacccccttttaactcttagctaa-----tttttttctagttatttattgccatgcctctaattaacaggtttattttgctacttcttaatttttaacacagttttttcagtgcttcttgacatttttggttttatgtgtgaaatactgacttcccaaaatgagagctgagaatttaactctctttgtaacctctttcccatccatccctcttaattcctcatcccaatgtaaagtaag----agtgattttgg-----------tttgcccaccattggtattag-aatatactgtattaggaccacataaacactgttaacacctgagccaggtcatatgtatgattttctcatccttttctgcactctttataaaacccacttgaactagtaactgtttgcttttatccttggtttagatttgtgtgttcttatcgctaatctactc i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188276323 500 - 190850796 agaaggaaataattctataaggcttgttacaaaaagcatcagctcctgactaccctacctgcttttctttttctgggaaaaactcccttttgactcttagctaattttttttttttctagttacttattgccatgcctctaattaacaggtttcttttgctg---ctgaatttttaacatggtctttttgatacttcttgaattttttggtttcacgtattaactactgacttcccaaaatgggagctgagaatttaactctc-ttgtaaactc-ttcccctccatccgccttcattccttgtcccaatataatgtaagaggaagtgattttgg-----------ttagaccagtgttggtattcacaatgtaccgtgtta-gaccacgtaaacgttgttaataactgagctaggtcatacatgtgattttcttatcgttt-------------agaaacccacttgaactagtaactatttgcttttatccttggtttcgatttgtatgttcttatcgctaatgcactc i calJac3.chr3 C 0 I 190 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I e chlSab2.chr7 132891435 0 + 135778131 C e papAnu2.chr5 176048998 0 + 178775436 C e macFas5.chr5 186434237 0 + 189454096 C e rheMac3.chr5 181095898 0 + 184069350 C a score=305523.000000 s hg38.chr4_KI270785v1_alt 89956 409 + 119912 tcaaattctccTACCGTTCCATTTGATAGCATCTTGCTTTTTTTGCAGGGTGCAATATCTTTCCTGCCCAGGTAAGCAGAGGactgcaggatgctgcgactaggttccttctttgaagatccccaacttcattagtcttagattttattctcctttctaagattccccagaagactctcctcc-aattctggcctggagtatataaacTGCCCATATCAGATGTGTTATTTTATTTAAAAATAATTTTTGAGTTCTTTTATTATTGCAAAAGTTCTGTTGGT-AAAATAAAACTTTAGAAATGCAAAA-------AAAAGAAAACAGATATACATTTTTAATTCCACTATGAAAACAGAACAACAATTTAATTGCTTAATTTCTTCTGTTTAACAAAGAAAGTTGGAGTTGGCAATAC s panTro4.chr4 190357274 413 + 193495092 tcaaattctccTACCGTTCCATTTGATAGCATCTTGCTTTTTTTGCAGGGCGCAATGTCTTTCCTGCCCAGGTAAGCAGAGGactgcaggatgctgcgactaggttccttctttgaagatccccaacttcattagtcttagattttattctcctttctaagattccccagaagactctcctcc-aattctggcctggagtatataaacTGCCCATATCAGATGTGttattttatttaaaaataatttttGAGTTCTTTTATTATTGCAAAAGTTCTGTTGGT-AAAATAAAACTTTAGAAATGCAAAAAA---AGAAAAGTAAACAGATATACATTTTTAATTCCACTATGAAAACAGAACAACAATTTAATTGTTTAATTTCTTCCGTTTAACAAAGAAAGTTTGAGTTGGCAATAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195331272 395 + 198332218 ccaaattctccTACCGTTCCGTTTGATAGCATCTTGCTTTTTT---------------------TGCCCAGGTAAGCAGAGGactgcaggatgctgcgactaggttctttctttgaagatccccaacttcattagtcttagattttattctcctttctaagattccccagaagactctcctcc-aattctggcctggagtatataaacTGCCCATATCAGATGTGttattttatttaaaaataatttttgagttattttattattGCAAAAGTTCTGTTGGT-AAAATAAAACTTTAGAAATGCAAAAAAAATAGAAAAGTAAACAGATATACATTTTTAATTCCACTATGAAAACAGAACAACAATTTAATTGTTTAATTTCTTCCATTTAACAAAGAAAGTTGGAGTTGGCAATAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111293913 414 + 115148730 ccaaattctccTGCCGCTCCATTTGATAGCATCTTGCTTTTTTTGCAGGGTGCAATATCTTTCCTGCCCAGGTAAGCGGAGGactgcaggatgctgcaactaggttctttctttgaagatacccaacttcattagtcttagattttattctcctttctaagattccccagaagactct-ctcc-aattctggcctggagtatataaacTGCCCATATCAGGTGTGTTATTTAATTTAAAAATAATTTTTTAGTTCTTTTATTACTGCAAAAGTTCTGTTGGT-AAAATAAAACTTTAGAAATGCAAAAAA-ATAGAAAAGTAAACAGATATACATTTTTAATTCTACTGTGAAAACAGAAAAACAATTTAATAGTTTAATTTCTTCCATTTAACAAAGGAAGTTGGAATTGGCAATAC i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188277013 405 - 190850796 TTAGATTCTTCTGCCATTCCATCTGAGAGCATCCTGTGTTTTTTGCAGGGGTGCATGTCCTTCCTATCCAGATAAGTGGAGGACTGCAGGAGGCTGGGACTAGGGTCTTTCCTTGAAAATCCCCAACTTCATCAGTGTTAGATGTTATTCTCCTTTCTAAGATTCCCCAGAAGATTCTCCTCCAAAACCCTGCCTGGA--ATATAAAATGCCCATATTAGATGttttattttatttaaaaataatttttGAGTTCTTTTATTATTATAGAAGTTCTGTTGGTAAAAACAAAATTTCAGAAATGCAACAAA--TAGAAGAGTAAACAGATATACATTTTTAATTCCACCACGGAAAGAGAACAAT-------TTGTTT--TTTCTTCCATTTAACAAAGGGAGTTGGAGTTAGCAATAG i calJac3.chr3 I 190 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I e chlSab2.chr7 132891435 0 + 135778131 C e papAnu2.chr5 176048998 0 + 178775436 C e macFas5.chr5 186434237 0 + 189454096 C e rheMac3.chr5 181095898 0 + 184069350 C a score=257158.000000 s hg38.chr4_KI270785v1_alt 90365 87 + 119912 AGTAGGCACTGAACACTTCTGATAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTCAATATTTTTGTGTTAA s panTro4.chr4 190357687 87 + 193495092 AGTAGGCACTGAACAATTCTGATAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTCAATATTTTTGTGTAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195331667 87 + 198332218 AGTAGGCACTGAACAATTCTGATAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTCAATATTTTTGTGTAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111294327 87 + 115148730 AGTAGGCACTGAACAATTCTGATAAAGCATTAATGCAAAAATCAATGTTACATCAAATACATAAAGTGGTCAATATTTTTGTGTAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181095898 87 + 184069350 AGTAGGCACTGAACAATTCTACTAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTAAATATTTTTGTGTAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186434237 87 + 189454096 AGTAGGCACTGAACAATTCTACTAAAGCATTAATGCAAAAATCAATGTCACATCAAATATATAAAGTGGTAAATATTTTTGTGTAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176048998 87 + 178775436 AGTAGGCACTGAACAATTCTACTAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTAAATGTTTTTgtgtaaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132891435 87 + 135778131 AGTAGGCACTGAACAATTCTGCTAAAGCATTAATGCAAAAATCAATGTCACATCAAATACATAAAGTGGTAAATATTTTTGTGTAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188277418 86 - 190850796 AGCAGGCACAGAACAATTTTGATAAAGTATT-CCATAAAAATCCATGTCACATCAAATACATGAAGTGGTCAATATTTGTGTGTGAA i calJac3.chr3 C 0 I 297 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=2162622.000000 s hg38.chr4_KI270785v1_alt 90452 746 + 119912 AAGTAAAAAGCACATCTTAAACATTAACTTTGAAATAGATTGATGTGCAAATCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCATGTGACAATGTATTCCACCCTAGTAATATGAAATGG------ATCAAGGAAGCAGAAGGTATATCTATTTAAGTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGCTATTGTGGATGTAAAAGTTTTTCTAAGAAGTTGGGGAGATTATTTCAGGTAAC------CCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAATACCTTGCCGGTAGAGAAGACACTTTGCAGACGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAGCGACTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTAATTGAGTAAGATGTCTGAGTATTTTTTT-AAAAGTTTAGGTGGGTTGAAAACTCTCTGCAATAATCTTCCAGAGCACAATGCAGGGAAGGGACTGGCTGATATAAAGCTGCCTGTTATTAAATTATCCTGGGATGGGAAGCAAGCAATTATGGGGTTACCTGGGATGGTAGGGAGCAGAAAAGCAAC-AAATGCTGAGAAATTAGATGAAACAACAATTTAAAAA---------------AAATGAATCTAAATCCAAGCCAAGTTATCT-------TGTAGACTGCTACTGACCAAGGATTTAGAAGAGAGCt----tttatttatttatttattt------------ s panTro4.chr4 190357774 750 + 193495092 AAGTAAAAAGCGCATCTTAAACATTAACTTTGAAATAGATTGATGTGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCATAGGAAGAGAAATCATGTGACAATGTATTCCACCCTAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATATATCTATTTAAGTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGCTATTGTGGATGTAAAAGTTTTTCTAAGAAGTTGGGGAGATTATTTCAGGTAAC------CCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAATACCTTGCCGGTAGAGAAGACACTTTGCAGACGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCGGCCACTGAACAGAACTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTGAGTAAGATGTCTGAGTATTTTTTT-AAAAGTTTAGGTGGGTTGAAAACTCTCTGCAATAACCTTCCAGAGCACAATGCAGGGAAGGGACTGGCTAATATAAAGCTGCCTGTTATTAAATTATCCTGGGATGGGAAGCAAGCAATTATGGGGTTACCTGGGATGGTAGGGAGCAGAAAAGCAAC-AAATGCTGAGAAATTAGATGAAACAACAATTAAAAAA---------------AAATGAATCTAAATCCAAGCCAAGTTATCT-------TGTAGACTGCTACTGACCAAGGATTTAGAAGAGAGCTtttatttatttatttatttattt------------ i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195331754 753 + 198332218 AAGTAAAAAGCACATCTTAAACATTAACTTTGAAATAGATTGATGTGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCATGTGACAATGTATTCCACCCTAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATATATCTATTTAAGTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGCTATTGTGGATGTAAAAGTTTCTCTAAGAAGTTGGGGAGATTATTTCAGGTAACCCTCAACCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAGTACCTTGCCGGTAGAGAAGACACTTTGCAGACGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAGCCACTGAACAGATCTCAGTATTGCTGTTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTGAGTAAGATGTCTGAGTATTTTTTTAAAAAGTTTAGGTGGGTTGAAAACTCTCTGCAATAACCTTCCAGAGCACAATGCAGGGAAGGGACTGGCTGATATAAAGCTGCCTGTTATTAAATTATCCTGGGATGGGAAGCAAGCAATTATGGGGTTACCTGGGATGGTAGGGAGCAGAAAAGAAAC-AAATGCTGAGAAATTAGATGAAACAACAATTTAAAAA---------------AGATGAATCTAAATCCAAGCCAAGTTATCT-------TGTAGACTGCTACTGACCAAGGATTTAGAAGAGAGCt----tttatttatttatttattt------------ i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111294414 740 + 115148730 AAGTAAAAAGCACATCTTAAACATTAA---TGAAGTAGATTGATATGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGTGTAGGAAGAGAAATCATATGACAATGTATTCCACGCTAGTCATATGAAATGG------ATCAAGGAAGCAGAAGATATATCTATTTAAGTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGCTATTGTGGATGTAAAAGTTTTTCTAAGAAGTTGGGGAGATTATTTCAGGTAAC------CCTGACAGTTGTT-CCATCCTTCAAAGTCTGGAGTACTGCAGTACCTTGCTGGTAGAGAGGACACTTTGCAGATGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAGCCGCTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTGAGTAAGATGTCTGAGTATTTTTTA-AAAAGTTTAGGTGGGTTGAAAA--CTCTGCAATAACCTTCCAGAGCACAATGCAGGGAAGGGACTGGCTGATATAAAGCTGCCTGTTATTAAATTATCCTCGAATGGGAAGCAAGCAATTATGGAGTTACCTGGGAGGGTAGGGAGCAGAAAAGCAAC-AAATGCTGAGAAATTACATGAAACAACAATTTAAAAA---------------GAATGAATCTAAATCCAAGCAAAATTATCT-------TATAGACTGCTACTGACCAAGGATTTAGAAGAGAGCt----tttatttatttatttatgt------------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181095985 747 + 184069350 AAGTAAAAAGCATCTCTTAAACCTTAACTTTGAAATGGATTGATATGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCACGTGACAATATATTCCTCCCCAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATGTATCTATTTAACTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGTTATTGTGGATGTAAAAGTTTTTCTAAGAAGCTGGGGAGATTATTTCAGGTAACCTCCAACCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAGTACCTTGCAGGTAGAGAGGACACTTTGTAGATGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAACCACTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTA----AGATGTCTGAGTATTTTTA--AAAAGTTTAGGTGGATTGAAAACTCTCTGCAATAATCTTCCAAAGCACAATGCAGGGAAGGGACTGGCTGATATAAAGCTGCCTGTTATTAAATTATCCTGGGATGGGAAGCAAGCTATTATGGAGTTACCTGGGATGGTAGGGGGCAGAAAAGCAAC-AAATGCTGAGGAATTGGATGAAACGCCAACAACAAAA---------------AAATGAATCTAAATCCAAGCAAAGTTATCT-------TGTAGACTGCTCCTGACCAAGGATTTAGAAGGGAGCT----tttatttatttatttattt------------ i rheMac3.chr5 C 0 M 399 s macFas5.chr5 186434324 747 + 189454096 AAGTAAAAAGCATCTCTTAAACCTTAACTTTGAAATGGATTGATATGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCACGTGACAATATATTCCTCCCCAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATGTATCTATTTAACTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGTTATTGTGGATGTAAAAGTTTTTCTAAGAAGCTGGGGAGATTATTTCAGGTAACCCCCAACCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAGTACCTTGCAGGTAGAGAGGACACTTTGTAGATGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAACCACTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTA----AGATGTCTGAGTATTTTTA--AAAAGTTTAGGTGGATTGAAAACTCTCTGCAATAATCTTCCAAAGCACAATGCAGGGAAGGGACTGGCTGATATAAAGCTGCCTGTTATTAAATTATCCTGGGATGGGAAGCAAGCTATTATGGAGTTACCTGGGATGGTAGGGGGCAGAAAAGCAAC-AAATGCTGAGGAATTGGATGAAACGCCAACAACAAAA---------------AAATGAATCTAAATCCAAGCAAAGTTATCT-------TGTAGACTGCTCCTGACCAAGGATTTAGAAGGGAGCT----tttatttatttatttactt------------ i macFas5.chr5 C 0 I 20 s papAnu2.chr5 176049085 747 + 178775436 aagtaaaaagcatcTCTTAAACCTTAACTTTGAAATGGATTGATATGCAAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCACATGACAATATATCCCTCCCCAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATGTATCTATTTAACTTTGATTGATGGTTCAAGAGGATTTTGTAAGTGTTATTGTGGATGTAAAAGTTTTTCTAAGAAGTTGGGGAGATTATTTCAGGTAACCCCCAACCTGACAGTTGTTCCCATCCTTCAAAGTCTAGAGCACTGCAGTACCTTGCAGGTAGAGAGGACACTTTGTAGATGGCATTGGAGAAAAACTGTGCCCTTTACTCTCCCAACCACTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCATGAGCTATTGGCAAGTGATTA----AGATgtctgagtatttttt--aaaagtttaggtGGATTGAAAACTCTCTGCAATAATCTTCCAAAGCACAATGCAAGGAAGGGACTGGCTGATATAAAGCTGCCTGTTACTAAATTATCCTGGGATGGGAAGCAAGCTATTATGGAGTTACCTGGGATGGTAGGGGGCAGAAAAGCAAC-AAATGCTGAGGAATTGGATGAAAcgccaacaacaaaa---------------aaatgaatctaaatCCAAGCAAAGTTATCT-------TGTAGACTGCTCCTGACCAAGGATTTAGAAgggagct----tttatttatttatttattt------------ i papAnu2.chr5 C 0 I 4 s chlSab2.chr7 132891522 756 + 135778131 AAGTGAAAAGCATCTCTTAAACCTTAACTTTGAAACGGGTTGATATGAGAACCTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCAATGCGTAGGAAGAGAAATCACATGACAATATATTCCTCCCTAGTAATATGAAATGG------ATCAAGGAAGCAGAAGATGTATCTATTTAACTTTGATTGATGGTTCAAGAGGATTTTGTAAGCGTTATTGTGGATGTAAAGGTTTTTCTAAGAAGTTGGGGAGATTATTTCAGGTAACCCCCAACCTGACAGCTCTTCCCATCCTTCGACGTCTAGAGTACTGCAGTACCTTGCAGGCAGAGAGGACACTTTGCGGATGGCATTGGAG-AAAACTGTGGCCTTTACTCTCCCAGCCACTGAACAGATCTCAGTATTGCTATTAGAAAGAAATTAGTCAGGAGCTATTGGCAAGTGATTGAGTCAGATGTCCGAGTATTTTTA--AAAAGTGTAGGTGGATTGAAAACTCTCTGCAATAACCTTCCAAAGCACAATGCAGGGAAGGGACTGGCTAATATAAAGCTGCTTGTTACT-AATTATCCTGGGATGGGAAGCAAGCTATTATGGAGTTACCTGGGATGGTAGGGGGCAGAAAAGCAAC-AAATGCTGAGGAATTGGATGAAACGCCAACAACAAAA---------------AAATGAATCTAAATCCAAGCAAAGTTATCTTGTAGACTGTAGACTGCTCCTGACCAAGGATTTAGAAGAGAGCT----tttatttatttatttattt------------ i chlSab2.chr7 C 0 I 20 s calJac3.chr3 188277801 774 - 190850796 aaGTAAACAGTGCATCTTAAACATTAACTTTGAGATAGATTGATGTGCAAACGTAAATTTGTTTTGCAAAGCCACTGTTTCAATGGAAAGCCATGCATAGGAAGAGAAATCATGTGACAGTATACTCCACACCAGAAATATGAAATGGAAAACCATCAAGGAAACAGAAGGTGTATCTATTTAACTTTGATTGAT-GTTCAAGAGGATTTTGTAAGTGCTATTGCAGATGTAAAGGTTTTTCTAAGA---TGGGGAGATGCTTTCAGGTAATCCTCAACCCGACAGTTGTTCCCATCCTTCAAAGTCTAGAGTACTGCAGCACCTTGCAAGCGGAGAGGACACTTTGCAGA---CACTGAAGGAAATCTGTGCCCTCTACGCCCCCAGGCACTCAGCAGATCTCAGTATTGCTATTAGAAAGGAATTAGTCATGAGCTATTGGCAAGTGATTGAGTAAGATGTTTGAGTATTTTTA--AAAAGTTTAG--GAGTTGAAAATTCTCTGCAATAACCTTCCAAAGCGCAATGCAGAGAAGGGACTGGATGATAGAAAGCTGCCTTTTATTAAATTATCCGGGGATGGGAAGCAAGCAATTAC--AGTCACCTGGGATGGTAGGAGGCAGAAGAGCAACAAAATACTGAGAAATTAGACGAGACCAAAAAAAAAAAAAAGAGAGAGAGAAAGAAATGAATTTAAATCCAAGAAAAATTATTT-------TCTAGATTGCTCCTGACCAAGGATTTAGAAGAGCGCC----tttatttatttgtttgtttatttatttattt i calJac3.chr3 I 297 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=533467.000000 s hg38.chr4_KI270785v1_alt 91198 232 + 119912 -----tttgggacagaatcttcctctgtcacccaggctgaagtgcagtggcacgatctcggctcactgcaatctctgcctcccgggttcaagcaattctcgtgcctcaccctcccaagtagctaggactacaggcacgtgccaccacgcctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctctaactcctgacctcaggtgatccgcct s panTro4.chr4 190358524 232 + 193495092 -----tttgggacagaatcttcctctgtcacccaggctgaagtgcagtggcacgatctcggctcactgcaacctccgcctcccgggttcaagcaattctcgtgcctcaccctcccaagtagctaggactacaggcacgtgccaccacgcctggctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctctaactcctgacctcaggtgatccgcct i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195332507 232 + 198332218 -----tttgggacagaatcttcctctgtcacccaggctgaagtgcagtggcaccatctcggctcactgcaacctccgcctcctgggttcaagcaattctcgtgcctcaccctcccaagtagctaggactacaggcacatgccaccacgccttgctaatttttgtattttcagtagagatggggtttcaccatgttggccaggctggtctctaactcctgacctcaggtgatctgtct i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111295154 232 + 115148730 -----tttgggacagaatcttcctctgtcgcccaggctgaagtgcagtggcacaatctcggctcactgcaacctctgcctccagggttcaagcagctctcgtgcctcaccctcccaagtagctaggactgcaggcacacgccaccacgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtctctaactcctgacctcaggtgatctgccc i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186435091 232 + 189454096 -----attgagacagaatcttcctctgtcacccagactggagtgcagtggtgcaatctctgctcactgcaacctccgcctcctgggttcaagcaattctcgtgcctcaccctcccaagtagctgggactacaggcacgcgccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtccctaactcctgacctcaggtgatctaccc i macFas5.chr5 I 20 C 0 s papAnu2.chr5 176049836 232 + 178775436 -----attgagacagaatcttcctctgtcacccagactggagtgcagtggtgcaatctctgctcactgcaacctccgcctcccgggttcaagcaattctcgtgcctcaccctcccaagtagctgggactacaggcacgcgccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtccctaactcctgacctcaggtgatccaccc i papAnu2.chr5 I 4 C 0 s chlSab2.chr7 132892298 232 + 135778131 -----attgagacagaatcttcctctgtcgcccagactggagtgcagtggtgtgatctctgctcactgcaacctccgcctcccgggttcaagcaattctcgtgcctcaccctcccaagtaactgggactacaggcatgcgccaccacacctggctgatttttgtatttttagtagagatggggtttcaccatgttggccaggctggtccctaactcctgacctcaggtgatccgccc i chlSab2.chr7 I 20 C 0 s calJac3.chr3 188278575 236 - 190850796 ttttaactgagatcgagtctcactctgtcacccaggctggagtgcaatggcacagtctcggctc-ctgcaacctccgcctcctggcttcaagcaattcccttgcctccgcctcctgagtaactaggactacaggcacgcaccaccacagcaggctaagttttgtatttttagtagagactgggttttaccatgttggccggactggtcttgaactcctgaccttaggtgacccactc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I e rheMac3.chr5 181096732 399 + 184069350 M a score=704639.000000 s hg38.chr4_KI270785v1_alt 91430 246 + 119912 gccttggcctcccaaagtgctgggattacaggcgtgagccaccacgcctggccTAGAAGAGAGCTTTTTGGAAAAATGCAAATAACAATGCTAATTGTCTCTGATTCTTTTAAA-TTGTTGGTAGGTGAATGTATCTATGCAAATGTGCATCGTATATAACTTTCAGTAAGCTGTTCATTGGATAACGGTGATTCAGCCTGAGTTATCTCAATTTGTTTTCTCTAATGTTACAACATTTCAGGTGGT s panTro4.chr4 190358756 247 + 193495092 gccttggcctcccaaagtgttgggattacaggcgtgagccaccatgcctggccTAGAAGAGAGCTTTTTAGAAAAATGCAAATAACAATGCTAATTGTCTCTGCTTCTTTTAACTTTGTTGGTAGGTGAATGTATCTATGCAAATGTGCATCGTATGTAACTTTCAGTAAGCTATTCATTGGATAATGGTGATTCAACCTGAGTTATCTCAGTTTGTTTTCTTTAATGTTACAACATTTCAGGTGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195332739 246 + 198332218 gccttgg-ctcccaaaatgctgggattacaggcgtgagccaccatgcctggccTAGAAGAGAGCTTTTTAGAAAAATGCAAATAACAATGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTAGGTGAATGTATCTATGCAAATGTGCATTGTATATAACTCTCAGTAAGCTATTCATTGGATAATGGTGATTCAACCTGAGTTATCTCAATTTATTTTCTTTAATGTTACAACATTTCAGGTGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111295386 247 + 115148730 gccttggcctcccaaagtgctgggattacaggcatgggccaccatggctggccTAGAAGAGAGCTTTTCAGAAAAATGTAAATAACAAGGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTAGGTGAATGCATCTATGCAAATGTGCATCGTATATAACTCTCAGTAAGGTATTCATTGGATAATGGTGATTCAACCTGAGTTATCTCAGTTTGTTTTCTTTAATGTTACACCATTTCGGGTGGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181097147 244 + 184069350 gccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccTAGAAGAGAGCTTTTTAGAAAAATGCAAATAACAATGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTGGGTGAATATGTCTATGCAAATGTGCATCGTATATAACTCTTAGTAATCTGTTCATTGGATAATGGTGATTCAACCTGAGTTATCTCAGTTTGTTTTCTTTCATGTTACAACATTTCA---AGT i rheMac3.chr5 M 399 C 0 s macFas5.chr5 186435323 244 + 189454096 gccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggccTAGAAGAGAGCTTTTTAGAAAAATGCAAATAACAATGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTGGGTGAATATGTCTATGCAAATGTGCATCGTATATAACTCTTAGTAATCTGTTCATTGGATAATGGTGAGTCAACCTGAGTTATCTCAGTTTGTTTTCTTTCATGTTACAACATTTCA---AGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176050068 244 + 178775436 gccttggcctcccaaagtgctgggattacaggtgtgagccaccatgcctggcctagaagagagctttttagaaaaatgcaaataacaatGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTGGGTGAATATGTCTATGCAAATGTGCATCGTATATAACTCTTAGTAATCTGTTCATTGGATAATGGTGATTCAACCTGAGTTAtctcagtttgttttctttcatgttaCAACATTTCA---AGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132892530 243 + 135778131 gccttggcttcccaaagtgctgggattacaggtgtgagccaccatgcctggccTAGAAGAGAGCTTTTTAGAACAATGCAAATAACAACGCTAATTGTCTC-GATTCTTTTAACTTTGTTGGTGGGTGAATATATCTATGCAAATGTGCATTGTATATAACTCTTAGTAATCTGTTCATTGGATAATGGTGATTCAACCTGAGTTATCTCAGTTTGTTTTCTTTCATGTTACAACATTTCA---AGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188278811 242 - 190850796 tccttggtcttccatggtgctgggattacaggcgtgagcca-tgcacctggccTAGAAGAGAGCTTTT-AGAAAAATGCAAATAGCATTGCTAATTGTCTCTGATTCTTTTAACTTTGTTGGTAGGTGAATATTTCGATGCGAATGTGCATCTTATATGACTCTCAGTGAGCTACTCACTGGATACCGGTGGCTCAACCTGTGTTATCTCAATCTGTTTCCTTTGTTGTTACACCATTTCA---GGT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15759859 909 - 59632846 I e mm10.chr8 84755113 2963 - 129401213 I a score=340800.000000 s hg38.chr4_KI270785v1_alt 91676 112 + 119912 ACGGTTCATCTGGACCAGCCTCTGATGTGGGGAAGACCAAGCG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCGGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ACGAGGGC-------- s panTro4.chr4 190359003 112 + 193495092 ACGGTTCATCTGGACCAGCCTCTGATTTGGGGAAGACCAAGCG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCGGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ATGAGGGC-------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195332985 112 + 198332218 ACGGTTCATCTGGACCAGCCTCTGATTTGGGGAAGACCAAGCG-AGAGCACACTGTGGAGA-----------------------------GTGAGTCCTGGTCGGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ATGAGGGC-------- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111295633 112 + 115148730 ACGGTTCATCTGGACCAGCCTCTGATTTGGGGAAGACCAAGCG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCGGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTAACCC-------ACGGGGGC-------- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181097391 112 + 184069350 ATGGTTCATCTGGACCAGCCTCTGATTTGGGGAAGACTAAGTG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCAGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ATGAGGGC-------- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186435567 112 + 189454096 ATGGTTCATCTGGACCAGCCTCTGATTTGGGGAAGACTAAGTG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCAGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ACGAGGGC-------- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176050312 112 + 178775436 ACGGTTTATCTGGACCAGCCTCTGATTTGGGGAAGACTAAGTG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCGGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ACGAGGGC-------- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132892773 112 + 135778131 ACGGTTCATCCGGACCAGCCTCTGATTTGGGGAAGACTAAGTG-AGAGCACACTGCGGAGA-----------------------------GTGAGTCCTGGTCAGTTTGGGT----------------------------------------ATGGCTCT--CAGCAGACTGACCC-------ACGAGGGC-------- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188279053 111 - 190850796 ATGGTTAATCTGGAGCAGCCTCTGATTTGGGGAAGAACGGG-G-GGCGCACACTGCGGAGA-----------------------------GTCAGTCCCGGTCAGTCTGGGC----------------------------------------GTGGCTGT--CAGTGGGCTAGCCC-------ATGAAGCC-------- i calJac3.chr3 C 0 I 112 s canFam3.chr16 15760768 199 - 59632846 ATGGTTCATCTGAACCAGGCTGTCATGTTGGGCAGATCAAGTGAAGAGCACATGGCTGAGAGTAGAATGATCACTTTGGTGTTGGCCTCTGTGAATCCTGGCCCCACAGAGTACACCCTGCTGAGCTGAAATATTCTCCTGAACTTGTTTCCATGGCACTGACATCAGAGTATCCTTAAGTTAATGGGCACATCTGATT i canFam3.chr16 I 909 C 0 e mm10.chr8 84755113 2963 - 129401213 I a score=752024.000000 s hg38.chr4_KI270785v1_alt 91788 243 + 119912 CAGCAGCTGCTGGATTTAATTCGCTGATTTTGTATGAACTGTAGATTTCCCTGGGAAATCTGCTATGCACACACAAGTGAGAAGGCAAC-CATGAGAAGGAGGCCAG-GGCTGAGGCTCTGCAAGTGCA-CAC-GGCTCGTTGCAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGAGGAAGCCTGCTGGG-------------------------GTTTGAG-------CTCATTTGTGTTGTCAGTATCTCTTATCACAGCATCAGATT s panTro4.chr4 190359115 243 + 193495092 CACCAGCTGCTGGATTTAATTCGCTGATTTTGTATAAACTGTAGATTTCCCTGGGAAATCTGCTATGCACACACAAGTGAGAAGGCAAC-CATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCA-CAC-GGCTCATTGCAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGAGGAAGCCTGCTGGG-------------------------GTTTGAG-------CTCATTTGTGTTTTCAATATCTCTTATCACAGCATCAGATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195333097 243 + 198332218 CACCAGCTGCTGGATTTAATTCGCTGATTTTGTATAAACTGTAGATTTCCCTGGGAAATCTGCTATGCACACACAAGTGAGAAGGCAAC-CATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCA-CAT-GGCTCACTGCAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTGGCCCAGAGAGGAAGACTCCTGGG-------------------------GTTTGAG-------CTCATTTGTGTTGTCCGTATCTCTTACCACAGCATCCGAGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111295745 243 + 115148730 CACCAGCTGCTGGATTTAATTCACAGATTTTGTATAAACTGTAGATTTCCCTGGGAAATCTGCTATGCACACACAAGTAAGAAAGCAAC-CATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCA-CAC-AGCTCACTGCAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGAGGAAGCCTGCTGGG-------------------------GTTTGAG-------CTCGTTTGTGTTGTCAGTATCTCTTACCACAGCATCAGATT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181097503 241 + 184069350 CACCAGCTGCTGGATTTAATTCGCTGATTTCATATAAAC--TAGATTTCCCTGGGAAATCTGCTATGCACACAC-AGTGAGAAAGCAAC-TATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCACCGC-GGCTCACTACAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGAGGAAGCCTGCTGGG-------------------------GTTTGAG-------CTTATTTGTGTTGTCAGTATCTCTTATCGTAGCATCAGATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186435679 241 + 189454096 CACCAGCTGCTGGATTTAATTCGCTGATTTCATATAAAC--TAGATTTCCCTGGGAAATCTGCTATGCACACAC-AGTGAGAAAGCAAC-TATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCACCGC-GGCTCACTACAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGAGGAAGCCTGCTGGG-------------------------GTTTGAG-------CTTATTTGTGTTGTCAGTATCTCTTATCGTAGCATCAGATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176050424 241 + 178775436 CACCAGCTGCTGGATTTAATTCGCTGATTTCATATAAAC--TAGATTTCCCTGGGAAATCTGCTATGCACACAC-AGTGAGAAAGCAAC-TATGAgaaggaggccag-ggctggggctcTGCAAGTGCACCGC-GGCTCACTACAGAAAAGCACGCGCCTCCCAGC-AGGAC---TGTTAGCCCGGAGAGGAAGCCTGCTGGG-------------------------GTATAAG-------CTTATTTGTGTTGTCAGTATCTCTTATCGTAGCATCAGATT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132892885 240 + 135778131 CACCAGCTGCTGGATTTAATTCGCTGATTTCATATAAAC--TAGATTTCCCTGGG-AATCTGCTATGCACACAC-AGTGAGAAAGCAAC-TATGAGAAGGAGGCCAG-GGCTGGGGCTCTGCAAGTGCACCAC-AGCTCACTACAGAAAAGCATGCGCCTCCCAGC-AGGAC---TGTTAGCCCAGAGGAGAAGCCTGCTGGG-------------------------GTTTGAG-------CTTATTTGTGTTGTCAGTATCTCTTATCATAGCATCAGATT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188279276 239 - 190850796 CACCAGCTGCTGGATTTAATTTGCCGATTTGGTATGAACTGT-GGCTTCTCTAGGAAATCTGCTATGCACAGACAAGCGAGAAAG-AAC-CACGCGGAGGAGGCCAG-GGCC-AGGCTGGGCAAGTGCA-CGC-GGCTCGCTGTAGAGAAGCGCACGCCTCCCAGC-AGGAC---CGCTA-CCCAGAGAGGAAGCCTGCCGGC-------------------------CTCCGAG-------CTCACTTGCCTTGTCAGAATCTCTTACCAGAGCATCAGATG i calJac3.chr3 I 112 C 0 s mm10.chr8 84758076 234 - 129401213 CATCAGTTGGTGACCTTGATTCATTGATTGAG-GTGAGTGAAATGTTTCATTGGGGAGTCTGCTTAGCACA-ATAAATGAGAAAATATCATCTGTGATGTAGACAAA-TTTTGATCTTGTGAACGAATA-TGT-GATCTTGTGAA----------TGACTCCCGGTGGGGAC---TATTAGCAGAGAAAGGTA-TCTGCTGGG-------------------------ATTTGAGAAATAAATTCATTTTTTTTGTACATGCCT-----TAGACCACCAGAGT i mm10.chr8 I 2963 C 0 s canFam3.chr16 15760967 273 - 59632846 CGACAGCTTCTGGGTTTAATCCTCTGATGTTGGATCAACTGTAGGTTTCACTGGGAAATTGGCTATGTACAAACAAGTGAGAACATAGG-CACAGCAATGTCAGTAGCAGCTGATCCCCTGAAAGTACA-TGCTTGCCTACCAAAGCAAAGCTCCCATTTCTCAGG-GATACTATTGTTAGTCCAGAAGGAAAACCTGTTGGGACTAAGATATGGCCACTGTGTGAGTGTTTGTG-------TATTTGTATATTGTTAAAGTCTCTTATCAGAACATCAGAGG i canFam3.chr16 C 0 I 414 a score=1902741.000000 s hg38.chr4_KI270785v1_alt 92031 554 + 119912 CAGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TTTTC--TAT-----------TTCTCTAGTGAATCTCCTGTAACT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCTATGGCTTACC-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGAGGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCGCTTTGGAGTGGA-TTTATCGTCATCTAAATTGAA-TGCATTGGTGAAGATTACGGAATTGATGTTTCCAAAATTCGTTGACATGTGCAG-ATGAAAATACAAAGGattatttttaatattatt-----atg---ttatattaAATAAACTTGCTGAGATTTTTT-AAGTTTCAATGCCTTCGGCCTCCAGTAGAACAGTTGTGATTAAAACAACACATATGCTTCCCATTTGGCTGGTTATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTATACATGC--ATTTAATGCCCAGTTA---------------------------------AATTTTGAAAGT---ATTTAACAATTTGCAGTGGGAGGTAA s panTro4.chr4 190359358 554 + 193495092 CAGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCG----TTTTC--TGT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCTATGGCTTACT-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGAGGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCGCTTTGGAGTGGA-TTTATCGTCATCTAAATTGAA-TGCATTGATGAAGATTACGGAATCGATGTTTCCAAAATTCGTTGACATGTTCAG-ATGAAAATGCAAAGGATTCtttttaatattatt-----atg---ttatattaaataaaCTTGCTGAGATTGTTT-AAGTCTCAATGCCTTCGGCCTCCAATAGAACAGTTGTGATTAAAACAACACATGTGCTTCCCATTTGGCTGGTTATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTATACATGC--ATTTAATGCCCAGTTA---------------------------------AATTTTGAAAGT---ATTTAACAATTTGCAGTGGGAGGTAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195333340 543 + 198332218 CAGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TTTTC--TAT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTC----------------CCTATGGCTTACT-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGAGGGGC--AAAAGGCAGCTTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCATTTTGGAGTGGA-TTTATCTTCACCTAAATGGAA-TGCATTGAAGAAGATTACGGAATTGATGTTTCCCAAATTCGTTGACATGTTCAA-ATGAAAATACAAAGGattatttttaatattatt-----atg---ttatattaaataaaCTTGCTGAGATTTTTT-AAGTTTCAATGGCTTTCGCCTCCAATAGAACAGTTGTGATTAAAACAACACATGTGCTTCCCATTTGGCTGGTTATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTATACATGC--ATATAATGCCCAGTTA---------------------------------AATTTTGAAAGT---ATTTAACAATTTGCAGTGGGAGGTAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111295988 554 + 115148730 CAGTGTCTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TCTTC--TAT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCTGTGGCTTACT-TTTCCAATAAGAAGGGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGAGGGGC--AAGAGCCAGCCTCTTTTCTATCGTGAAGGAAAACATACAATGTGGAAAA-GA-GTTCACTTTGGAGTGGA-TTTATCTTCACCTAAATTGAA-TGCATTGGTGAAGATTACGGAACTGATGTTTCCAAAATTCGTTGACATGTTCAG-ATGAAAATACAAAGGattatttttaatattatt-----atg---ttatattaAATAAACTTGCTGAGATTTTTT-AAGTTTCTATGTCTTCGGCCTCCAATAGAACAGTTGTGATTAAAACAACACATGTGCTTCCCATTTGGCTGGTTACGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTATACATGC--ATATAATGTCCAGTTA---------------------------------AATTTTGAAAGT---ATTTAACAATTTGCAGTGGGAGGTAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181097744 552 + 184069350 CCGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TTTTC--TAT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCCATGGCTTATT-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGGTGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCCCTTTGGAGTGGA-TTTATCTTCACCTAAATTGAA-TGCATTGATGAAAATTACAAAACTGATGTTTCCAAAATTCGTTGACATGtttat--taaaaat--aaaggattatttttaatattatt-----atg---ttatgttaaataaaCTTGCTGAGATTTTTTTAAGTTTCAATGTCTTCAGCCTCCAATAGAACAGTTGTGATTAAAACAACACACGTGCTTCCCATTTGGCTGGTCATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTGTACATGC--ATATAATGCCCCGTTA---------------------------------AATTTTGAAAGT---ATTGAACAATTTGCAGTGGGAGGTAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186435920 552 + 189454096 CCGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TTTTC--TAT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCCATGGCTTATT-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGGTGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCCCTTTGGAGTGGA-TTTATCTTCACCTAAATTGAA-TGCATTGATGAAAATTACAAAACTGATGTTTCCAAAATTCGTTGACATGTTTAT--TAAAAAT--AAAGGATTATTTTTAATATTATT-----ATG---TTATGTTAAATAAACTTGCTGAGATTTTTTTAAGTTTCAATGTCTTCAGCCTCCAATAGAACAGTTGTGATTAAAACAACACACGTGCTTCCCATTTGGCTGGTCATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTGTACATGC--ATATAATGCCCCGTTA---------------------------------AATTTTGAAAGT---ATTGAACAATTTGCAGTGGGAGGTAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176050665 552 + 178775436 CCGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGctgtca----ttttc--tat-----------ttctctagtgAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCCATGGCTTATT-TTTCCAATAAGAAGTGAAAGGTCTAGG-----------CTGTCAATATTTGAAATTGGTGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCCCTTTGGAGTGGA-TTTATCTTCACCTAAATTGAA-TGCATTGATGAAAATTACGGAACTGATGTTTCCAAAATTCGTTgacatgtttat--taaaaat--aaaggattatttttaatattatt-----atg---ttaTGTTAAATAAACATgctgagattttttaaagtttcaatgTCTTCAGCCTCCAATAGAACAGTTGTGATTAAAACAACACACGTGCTTCCCATTTGGCTGGTCATGGGAATATTTTGAAACaaggaatattttaaa-gttaattgtACATGC--ATATAATGCCCCGTTA---------------------------------AATTTTGAAAGT---ATTGAACAATTTGCAGTGGGAGGTAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132893125 551 + 135778131 CTGTGTTTTCTTAAGGAACAAAACACAGGA----------------------A-ACGGCTTGCTGTCA----TTTTC--TAT-----------TTCTCTAGTGAATCTCCTGTATCT-GAAAGTCACAAACTTCTTTC--TTTAAG---ACCCATGGCTTATT-TTTCCAAAAAGAAGTGAAAGATCTAGG-----------CTGTCAATATTTGAAATTGGGGGGC--AAAAGGCAGCCTCTTTTCTATCATGAAGGAAAACATACAATGTGGAAAA-GA-GTTCCCTTTGGAGTGGA-TTTATCTTCACCTAAATTGAA-TGCATTGATGAAGATTACGGAACTGATGTTTCCAAAATTTGTTGACATGTTTAT--TAAAAAT--AAAGGATTATTTTTAATATTATT-----ATG---TCATGTTAAATAAACTTGCTGAG-TTTTTTTAAGTTTCAGTGTCTTCAGCCTCCAATAGAACAGTTGTGATTAAAACAACACACATGCTTCCCATTTGGCTGGTCATGGGAATATTTTGAAACAAGGAATATTTTAAA-GTTAATTGCACATGC--ATATAATGCCCCGTTA---------------------------------AATTTTGAAAGT---ATTGAACAATTTGCAGTGGGAGGTAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188279515 569 - 190850796 CAGTGTTTTCTTAAGGAGCAGGACACAGGATCGCTTC------------AGGA-AACGCCTGCTGTGA----TTTTCTTTCT-----------CTCTCTAGTGCATCTCCTGTATCT-GAAAGTCACAAATCTCTTCCTTTTTAAC---ACCTATAACTAATC-TTTCCAATAAGAGGTGAAAAGTCTATG-----------CTGTCAATATTGAAAACTGGGGGGC--AAAAGCCAGCCTCTTTTCTATCAAGAAGGAAAACGTACAGTGGGGGAAG-GA-GTTCTCTTTGGAGTGGA-TTTATCTTCACCTGAATTAAA-CGCATTGATGAGGATTGCGCAATTGCTGTTTCCAAAGTTCGTTAAGATGTTCAG-ATGAAAATACAGCGGGGGCTTTTCAATGTTATC-----ATA---TCATATTAAATAAACTTGCATAGATATTTTTCAGTTTCAATGCCTTCGGCCTGCAATAGAACAGTTGTGATTAAAACAACACATGTGCTTCCCATTTGGCTGGTTATGGGAATATTTTGAAATAGGGAATATTTTAAA-GTGAGTTATACATGC--ATATAATGCCCAGTTA---------------------------------AATGTTGAAAGT---ATTTAACAATTTTCAGTGGGAGGTAA i calJac3.chr3 C 0 C 0 s mm10.chr8 84758310 572 - 129401213 CGATGCTTTCCTAAGAAACAAAACAAATGA----------------------GTCCCACTTAAGGTCACGTTCCTTC--TGT-----------TTCTCTAGGGCTTCTCTTGTGTCT-GAGAGCCATAGACTTCCTTT--CTTAAGGAAGCCTTT--CTTATT-GTCCTAGTAAGAACTGGAAGGTCCAGAAAAAAAAATACTTGCAAGTAGAGGAAAGGAGAAGGCCAAAGAGCCAACTTCATATCTGGGATGCGAGAACATGTTCAATGTGAAAACTGA-GTTCACTTTGGCAATGA-TTTATTTCTATCTAAATTGAA-CAGATTTGTGAAGATTACTGAATTGATGTTCTCT---------------TTCATAAAGAAAGT--AAAAGATTGGCTT--GTATTATTTGACAGTG---TTATAT----TAAACTTGCTTAATTGATTTCAAGTCT-AATGGCTGCTATCACATGTTGAGCTTGTGTGGTTAAAAGGATA--------------TTGTTGTGTCATGAAAATAGTTTTAAG--------GTTGTAAATGTTCATTGTACATGT--GTAAAATGTCTAATTAGTACTTCAATGTTTCTTATAATTTGGAGATTATAATTTTGAAATTATAATTTGAAGAGTTCCAGTAGAAGGGAA i mm10.chr8 C 0 I 145 s canFam3.chr16 15761654 597 - 59632846 CAGTGCTTTCTTAAAGAATAAAACAAATGATGGCATTAAAAAAAAAACAAAAA-ACTATTTACTGTCA----TCTCC--CGCCCCCCCCCCCATTCTCTAGTGCATCTCCTGCATTTAAAAAATCACAAACACCTTTT--CTTAAG---ACTTTTGGCTTGTTACCCCCAATAAGAACTGAAAGGTCTGGG-----------CTGTCATTATTTTCAATTTGGAGGC--AAATGTCAGCCTCTTTTCTCTTACAAGAAAAAATGTGCAACGTGGAAAG-GAGGTTGACTTTGGCATTCACTTTATCTTAACTTAAATTGAAGGGCTTTTGTGAAGATTATTGAATTGATGTTTTCA-AATTCTTCGGCATTCTCAG-ATGAAAGTACAAAGGGTTATTTTTACTATTATG-----GTGGAATCATAGCAAACAAAC-TGCTTAGATATTTTCAAGTTTCAATCCTTCTTGCCTCTTATAGAGCAGTTGTGGTTAAAATGACACATGTTCTTCTCAGGTGTGGGGGTGTGAGAATATTGTGaaatatatatgattttaaatattaattataCATGCATATATAATGCCTAGTTA---------------------------------CATTTTGAATGT---ATTTCATACTTTGGAAGGAGAAGTAA i canFam3.chr16 I 414 C 0 a score=279113.000000 s hg38.chr4_KI270785v1_alt 92585 87 + 119912 AGTAAATGTCTAATTCTGCCGCTTTCTCTGTGGTTCAGTGAAGCATCTTCTTGGTCATTGCCCTAACTGAATCTGAGCTAGGATGTT s panTro4.chr4 190359912 83 + 193495092 AGTAAATGTCTAATTCTGCCGCTTTCTCTGTGGTTCAGTGAAGCATCTTCTCGGTCATTGCCCTA----AATCTGAGCTAGGATGTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195333883 87 + 198332218 AGTAAATGTCTAATTCTGTCACTTTGTCTGTGGTTAAATGAAGCATCTTCTTGGTCATTGCCCTAACTGAATCTGAGCTAGGATGTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111296542 87 + 115148730 AGTAAATGTCTAATTCTGCCTCTGTCTCTGTGGTTTAATGAAGCATCTTCTCGGTCATTGCCCTAACTGAATCTGAGCTAGGATGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098296 87 + 184069350 AGTAAATGTCTAATTTTGCCACTTTCTTTGTGGTTCAATGAAGCATCTTCTTGGTCGTTGCCCTAACTGAACCTGAGCGAGGATGTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436472 87 + 189454096 AGTAAATGTCTAATTTTGCCACTTTCTTTGTGGTTCAATGAAGCATCTTCTTGGTCGTTGCCCTAACTGAACCTGAGCGAGGATGTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051217 87 + 178775436 AGTAAATGTCTAATTCTGCCACTTTCTTTGTGGTTCAATGAAGCATCTTCTTGGTCGTTGCCCTAACTGAACCTGAGCGAGGATGTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132893676 87 + 135778131 AGTAAATGTCTTATTCTGCCACTTTCTTTGTGGTTCAATGAAGCATCTTCTTGGTCGTTGCCCTTACTGAACCTGAGCGAGGATGTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280084 87 - 190850796 AGTAAATGTCTAATTCTGCCACTCCCCCTGTGGTTCAGTGAAGCTTCTTCTCGGTCGTTGCCCTAACTGAATCCGAGCTAGGAGACT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15762251 70 - 59632846 AGTAAATAT-----------------TCTATGATTTAACAGAGCATCTTTTTGGCCATTGCCCTAACTGAATCTAAGATGAGATGTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84758882 145 - 129401213 I a score=910912.000000 s hg38.chr4_KI270785v1_alt 92672 256 + 119912 CCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGTAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAAGGTTTCTTGATGTATCTAGCTCATGACAGAA---AAGACAAAAAAACAAAAATTACTCTGAAGA--CGAAAAGTCAGCTTGGGAAAGTTATGTATGTTTCCTTTTTAAAAGCCTTTTAACCTTTGGACTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ATGTG--TTAAGTAGTCAC s panTro4.chr4 190359995 256 + 193495092 CCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGTAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAACGTTTCTTGATGTATCTAGCTCAGGACAGAA---AAGACAAAAAAACAAAAATTACTCTGAAGA--CGAAAAGTCAGCTTGGGAAAGTTATGTATGTTTCCTTTTTAAAAGCCTGTTAACCTTTGGACTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ATGTG--TTAAGTAGTCAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195333970 256 + 198332218 CCATCACACTGACCTCGTTATAATTTTGAAACAGGAATTCCAGTAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCTCTCTAACCACTGCAAGGTTTCTTGATGTATCTAGCTCATGACAGAA---AAGACAAAAAAACAAAAATTACTCTGAAGA--CGAAAAGTCAGCTTGGGAAAGTTATGCATGTTTCCTTTTTAAAAGCCTTTTAACCTTTGGAGTTGAGAAA---TGCTTTTTCTTGTCTTTTC-AA-ATGTG--TTAAGTAGTCAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111296629 256 + 115148730 CCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGTAGG-AT--------------AGAATCGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAAGGTTTCTTGATGTATCTAGCTCATGACAGAA---AAGACAAAAAAACAAAAATTACTTTGAAGA--CGAAAAATCAGCTTGGGAAAGTTATGTATGTTTCCTTTTTAAAAGCCTTTTAACCTTTGGAGTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ACGTG--TTAAGTAGTCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098383 256 + 184069350 CCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGAAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAAGGTTTCTTGGTGTATCTAGCTCATGACAGAA---AAGACAAAAAAACAAAAATGACTCTGAAAA--CGAAAAGTCAGCTTGGGAGAGTTATGTATATTTCCTTTCTTAAAGCCTTTTAACCTTTGGAGTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ATGTG--TTAAGTAGTCAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436559 256 + 189454096 CCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGAAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAAGGTTTCTTGATGTATCTAGCTCATGACAGAA---AAGACAAAAAAACAAAAATGACTCTGAAAA--CGAAAAGTCAGCTTGGGAGAGTTATGTATATTTCCTTTCTTAAAGCCTTTTAACCTTTGGAGTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ATGTG--TTAAGTAGTCAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051304 256 + 178775436 TCATCACATTGACCTTGTTATAATTTTGAAACAGGAATTCCAGAAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAAGGTTTCTTGATGTATCTAGCTCatgacagaa---aagacaaaaaaccaaaaatgactctgaaaa--cgaaaaGTCAGCTTGGGAGAGttatgtatatttccttttttaaagccttttaaCCTTTGGAGTTGAGAAA---tgctttttcttgtctttta-aa-atgtg--ttaagtaGCCAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132893763 256 + 135778131 CCATCACATTGACCTTGGTATAATTTTGAAACAGGAATTCCAGAAGG-AT--------------AGAATTGTTCCAT------------TCTGTTGCCCCTCTAACCACTCCAGGGTTTCTTGATGTGTCTAGCTCATGACAGAG---AAGACAAAAAAACAAAAATGACTCTGAAAA--CGAAAAGTCAGCTTGGGAGAGTTATGTATATTTCCTTTTTTAAAGCCTTTTAACCTTTGGAGTTGAGAAA---TGCTTTTTCTTGTCTTTTA-AA-ATGTG--TTAAGTAGTCAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280171 245 - 190850796 CCATCACATTGATCTGGTGACAATTTCGAAAGAGGAATTCCAGTACG-AT--------------ATAA-------------------------CTGCCCCTCTAACCACTCCAAGGTTTCTTCATGTATCTAGCTCATGACAGAA---AAGACAAAAAACAAAAATTTACTTGGAAAA--CCAAAAGTCAGCTTGGGAAAATTATGTATATTTCCTCTTTTAAAGCCTTTTAACCTCTGGAGTTGAGAAA---TGCTTTTTCTTGTCCTTTA-AA-ATGTGTTTTAAGTGGTCAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84759027 281 - 129401213 ccaccatgttg---ttgctgggaattgaactcaggacctctggaaga-actgtcagtgctcttaaccactgagccatctctccagcttcTCTATTGATTTTCTAACTATTTCAGGGTTTCTTGATCCATATAACTCATTACAGCA---AAGAGAAAAAGAGAGAAAGGGAAAAAAAAACCCGAGAGACTGCCTTAGAAAAATCCTGT---TTCACCTTTTAGAAGCTTTTCAA-TTTCAGAGTTGATAAAACTTGCCTCTTCATTTAGTTTACAG-ATGTA--CTTGACACTCAC i mm10.chr8 I 145 C 0 s canFam3.chr16 15762321 262 - 59632846 CCGTAACATCGAACTTATTATAATTCTGAAATGAGAATCCCAAAAAGTGT--------------GAGATTGTTCCAT------------TCTATTATACCTCCAA-TGTTCCAAGTTTTCTTGATGTATCTAGCTCATGATAAGATGGAATAAAAAAAAACACCCAACACTCAGAAAA--CCAAAAGGTAGCTTTAGAAAATTATGTACATTTCATCTTTTAAAGCCT-TTAACTGTTGGAGTTGAGAAAACTCGCCTCTTCTTGTTTTTTA-AAGATATG--TTAAATAGTCAC i canFam3.chr16 C 0 I 855 a score=116824.000000 s hg38.chr4_KI270785v1_alt 92928 32 + 119912 ATCTTGAAAAGGACCAGA--TAAAATCATGTTTT s panTro4.chr4 190360251 32 + 193495092 ATCTTGAAAAGGACCAGA--TAAAATCATGTTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334226 32 + 198332218 ATCTTGAAAAGGACCAGA--TAAAATTATGTTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111296885 32 + 115148730 ATCTTGAAAAAGACCAGA--TAAAATTATGTTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098639 32 + 184069350 ATCTTGAAAAGGACCAGA--TAAAATTATGTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436815 32 + 189454096 ATCTTGAAAAGGACCAGA--TAAAATTATGTTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051560 32 + 178775436 ATCTTGAAAAGGACcaga--taaaattatgtttt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894019 32 + 135778131 ATCTTGAAAAGGACCAGA--TAAAATTATGTTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280416 32 - 190850796 ATTTTGAAAAGGACCAGA--TGAAATTACGTTTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84759308 34 - 129401213 ATTTTGAAAAGGATCAAAATTAAGATCATGGTTT i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I a score=406539.000000 s hg38.chr4_KI270785v1_alt 92960 136 + 119912 TCAggccagacatggtagctc---------atcccagcagtttgagaggccga-ggtgggtggatcacttgaggtcaggagttctagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccggg s panTro4.chr4 190360283 136 + 193495092 TGAggccagacatggtagctc---------atcccagcactttgagaggccga-ggtgggtggatcacttgaggtcaggagttctagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccggg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334258 136 + 198332218 TGAggccaggcatggtagctc---------atcccagcactttgagaggccga-ggggggtggatcacttgaggtcaggagttctagaccagcctggccaacacggtgaaaccccatctctactacaaacacaaaaattagccggg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111296917 137 + 115148730 TGAggccaggcatggtagctc---------atcccagcactttgagaggccgagggggggtgaatcacctgaggtcaggagttctagaccagcctggcaaacatggtgaaaccctgtctctactaaaaatacaaaaattagccggg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098671 136 + 184069350 TGAggccaggcatggtagctc---------atcccagcactttgagaggctga-ggtgggtggatcacttgaggtcaggagttctagaccagcctggccagcatggtgaaaccccatctctactaaagacacaaaaattagctggg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436847 136 + 189454096 TGAggccaggcatggtagctc---------atcccagcactttgagaggctga-ggtgggtggatcacttgaggtcaggagttctagaccagcctggccagcatggtgaaaccccatctctactaaagacacaaaaattagctggg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051592 136 + 178775436 tgaggccaggcatggtagctc---------atcccagcactttgagaggctga-ggtgggtggatcacttgaggtcaggagttctagtccagcctggccagcatggtgaaaccccatctctactaaagacacaaaaattagctggg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894051 136 + 135778131 TCAggccaggcgtggtagctc---------atcccagcactttgagaggccga-ggtgggtggatcccttgaggtcaggagttctagaccagcctggccagcatggtaaaaccgcatctctactaaagacacaaaaattagccggg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280448 145 - 190850796 TGACAcccggcacagtggctcatgcctgtaatcccagcactttggaaggccaa-ggtggatggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagctggg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I e mm10.chr8 84759342 0 - 129401213 C a score=12049.000000 s hg38.chr4_KI270785v1_alt 93096 4 + 119912 catg s panTro4.chr4 190360419 4 + 193495092 catg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334394 4 + 198332218 catg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297054 4 + 115148730 catg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098807 4 + 184069350 tatg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436983 4 + 189454096 tatg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051728 4 + 178775436 tgtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894187 4 + 135778131 catg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280593 4 - 190850796 tgtg i calJac3.chr3 C 0 C 0 s mm10.chr8 84759342 4 - 129401213 CATG i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I a score=396934.000000 s hg38.chr4_KI270785v1_alt 93100 154 + 119912 gtggcaggcacctgtaatcccagctacttggaaggctgagacaggagaattgcttgaaccagggaggcggaggttgcagtgagcctagatcgtgccactgcactctagcctggtcaatagagtgagactctgtctc---aaaaaaaaaaaaa------------TTGAT s panTro4.chr4 190360423 152 + 193495092 gtggcaggcacctgtaatcccagctacttggaaggctgagacaggagaatcacttgaaccagggaggcggaggttgcagtgagcctagatcgtgccactgcactctagcctggtcaatagagtgagaatctgtctc-----aaaaaaaaaaa------------TTGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334398 161 + 198332218 atggcgggtgcctgtaatcccagctacttggaaggctgacacaggagaatcgcttgaaccagggaggtggaggttgtagtgagccgagatcgtgccactgcactctagcctgggcaatagagtgagactctgtctc---aaaaaaaaaaaaaaaaaa-----aTTTGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297058 154 + 115148730 ttggcgggctcctgtaatcccagctacttggaaggctgagacaggagaatcgtttgaaccagggaggtggaggttgcagtgagccgagatcatgccactgcactctagcctgggcaatagagtgagactctgtctc---aaaaaaaaaaaaa------------TTGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098811 163 + 184069350 gtggcgggcgactggagtcccagctgcttggaaggctgaaacaggagaatcgcttgaacgcagaaggcagaggttgcagtgagccgagactgtgccattgcactctagcctagggaaaagagggggactctgtctc-aaaaaaaaaaaaaaaaaaGT-----TTTTGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186436987 161 + 189454096 gtggcgggcgactgtagtcccagctgcttggaaggctgaaacaggagaatcgcttgaacgcagaaggcagaggttgcagtgagccgagactgtgccattgcactctagcctaggtaaaagagtgagactctgtctc---aaaaaaaaaaaaaaaaGT-----TTTTGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051732 159 + 178775436 gtggcgggcgactgtagtcccagctgcttggaaggctgaaacaggagaatcgctggaacgcagaaggcagaggttgcagtgagccgagactgtgccattgcactctagcctaggtaaaagagtgagactctgtctc-----aaaaaaaaaaaaaagt-----ttttgat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894191 158 + 135778131 gtggcgggcgactgtagtcccagctgcttggaaggctgaaacaggagaatcgct-gaacgcagaaggcagaggttgcagtgagccgagattgtgccattgcactctagcctgggcaatagagtgagactctgtctc-----aaaaaaaaaaaaaaGT-----TTTTGAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280597 168 - 190850796 atggt-ggcacctataatcgtggctacttggaaggctgaggcatgagaatcacttgaactcgggagatggaggttacagtgagccacgatcacgccactgcactccagcctgggcaacagagtgagactctgtctctaaaaaaaaaaaaaaaaaaaTTATGATTTTGAT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I e mm10.chr8 84759346 0 - 129401213 C a score=689227.000000 s hg38.chr4_KI270785v1_alt 93254 213 + 119912 TTTTCATGTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTTTTAT-------GTATTTCACTTGGATTTTGGACAATAGAAATGAATAAGTTGGAATAGATCGGATGTTACATGGTGGACTCTACCTATAGAATGC-CACCAACCATCTCCTTTATGTGTTGTGAATGACCCAAGCCAGATCATGCAAGTCTCCATAGGCATGCCTCTT s panTro4.chr4 190360575 213 + 193495092 TTTTCATGTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTTTTAT-------GTATTTGACTCGGATTTTGGACAATACAAATGAATAAGTTGGAATAGATCGGATGTTACATGGTGGACTCTACCTATAGAATGC-CACCAACCATCTCCTTTATGTGTTGTGAATGACCCAAGCCGGATCATGCAAGTCTCCATAGGCATGCCTCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334559 212 + 198332218 TTTTCATTTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTTGTAT-------GTATTTGACTCGGATTTTGGACAATAGAAATGAATAAGTTGGAATAGATCAGATGTTACATGGTGGTCTCTACCTGTAGAATGC-CACCAACCACCTCCTTTATGTGTTGTGAATGACCCAAGCTGGAT-ATGCAAGTCTCCATAGGCATGCCTCTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297212 213 + 115148730 TTTTCATTTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTTGTAT-------GTATTTGACTTGGATTTTGGACAATAGAAATGAATAAGTTGGAATAGATCAGATGTTACATGGTGGACTCTACCTACAGAATGC-CACAAACCATCTCCTTTATATGTTGTGAATGACCCAAGCTGGATCATGCAAGTCTCCATAGGCCTGCCTCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181098974 213 + 184069350 ATTTCATTTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTCCTAT-------GTATTTGACTTGGATTTTGGACAATAGAAATGAGTAAGTTGGAATAGATCAGATGTTACATGGTGGAATCTACCTATAGAATGC-CACCAACCACCTCCTTTATGTGTTGTGAATGACCCAAGCTGGATCATGCAAGTCTCCATAGGCATGTCTCTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186437148 213 + 189454096 ATTTCATTTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGGACTTCCTAT-------GTATTTGACTTGGATTTTGGACAATAGAAATGAGTAAGTTGGAATAGATCAGATGTTACATGGTGGAATCTACCTATAGAATGC-CACCAACCACCTCCTTTATGTGTTGTGAATGACCCAAGCTGGATCATGCAAGTCTCCATAGGCATGTCTCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176051891 213 + 178775436 atTTCATTTGCCTAAGATTAAATTTAGGGCTCAGCTAAACCCCAAGGGACTTCCTAT-------GTATTTGACTTGGATTTTGGACAATAGAAATGAGTAAGTTGGAATAGATCAGATGTTACATGGTGGAATCTACCTATAGAATGC-CACCAACCACCTCCTTTCTGTGTTGTGAATGACCCAAGCTGGATCATGCAAGTCTCCATAGGCATGTCTCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894349 213 + 135778131 TTTTCATTTGCCTAAGATTAAATTTAGGGCTCATCTAAACCCCAAGGTACTTCCTAT-------GTATTTGACTTGGATTTTGGACAATAGAAATGAGTAAGTTGGAATAGATCAGATGTTACATGGTGGAATCTACCTATAGAATGC-CACTAAACACCTCCTTTATGTGTTGTGAATGACCCAAGCTGGATCATGCAAGTCTCCATAGGCATGCCTCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188280765 209 - 190850796 ATTTCATTTGCCTAAGATTCAATTTAGGGCTCATGTAAACCCCAAG--ACTTTCTAT-------GTATTTGACTCGGATTTTGGACAATAGAAATGAATAAGCTTGAATAGATTTGATGTTACATGGGGAAATCTACCTGTAGAATGC-CACCAACCATCT--TTTATGTGTTGTAAATGACCCAAGCTGGGTCAGGCAGGTCTCTGCAGGCCTGCCTCTT i calJac3.chr3 C 0 I 307 s mm10.chr8 84759346 212 - 129401213 TTTTCATTTGCCTAAATTTAAAATCTTGACTTTTCCAAACCCAAAGAGATTTTTTTTTTTTTTGATGTCTGACTCTGGCTTTGAAC-CTGCAACTGTGTGAGCTG---TATACCAGATGCTGTA-GGTAGACTCTGC----AGCCTGTGTTCTGGGGGCCTCCTGAACGTGCTGTGAATGACCCAAGCAGGACCATCCAGCTTTTCGTAGGCATGCCTCTC i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I a score=895654.000000 s hg38.chr4_KI270785v1_alt 93467 285 + 119912 CTtgtcagatacttctaattgagtgtgatgattttcctgctgagccttggtgtagctttacaaccctactcaacacagctctgtgggcagcaaagccagtgggcaggaattattaagtgagctgaaacTGCTTCTCTAACCTA--GGCTAGACCAAACAATAGGAAGTCAAGGTGATATCTAGGAGT---------T----GTACATATT-TTCAAATATAAAAATATTTCATTC---------ATTTGGAGGAAGGTAGGATGAACAAGGT-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA s panTro4.chr4 190360788 285 + 193495092 CTtgtcagacacttctaattgagtgtgatgattttcctgctgagccttggtgtagctttacaaccctactcaacacagctctgtgggcagcAAAGGCAGTGGGCAGGAATTATTAAGTGAGCTGAAACTGCTTCTCTAACCTA--GGCTAGACCAAACAATAGGAAGTCAAGGTGATATCTAGGAGT---------T----GTACATATT-TTCAAATATAAAAATATTTCATTC---------ATTTGGAGGAAGGTAGGATGAACAAGGT-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195334771 285 + 198332218 CTTGTCAGATACTTCTAATTGAGTGTGATGATtttcctgctgagccttggtgtagctttacaaccctactcaacacagctctgcgggcagcAAAGCCACTGGGCAGGAATTACTAAGTGAGCTGAAACTGCTTCTCTAACCTA--GGCTAGACTAAACAATAGGAAGTCAAGGTGATATCTAGGAGT---------T----GTACATATT-TTCAAATATAAAAATATTTCATTC---------ATTTGGAGGAAGGTAGGATGAACAAGGT-AGACAGTACTTATATGTCAGCTGGTAAGTAATTATTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297425 282 + 115148730 CTTGTCAGATACTTCAAATTGAGTGTGATGATCTTCCTGCTGAGCCTTGGTGTCGCTTTACAACCCTATTCAATACAGCTCTGTGGGCAGCAAAGCCAGTGGGCAGGAAT---TAAGTGAGCTGAAACTGCTTCTCTAACCTA--GACTAGACTAAACAGTAGGAAGTCAAGGTGATATCTAGGAGT---------T----GTACTTATT-TTCAAATATAAAAATATTTCATTC---------ATTTGGAGGAAGGTAGGATGAACAAGGT-AGACAGTACTAATATATCAGCTAGTAAGTAATCATTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181099187 284 + 184069350 CTtgtcagatacttctaattgattgtgatgattttcctgctgagccttggtgtagctttacaaccctactcaacacagccctgcgggcagcaaagccagcgggcaggaattattaagtgagctgaaacTG-GGCTCTAACCTA--GGCTAGACTAAACAATAGGAAGTCAAGGTGATATCTAGGAGT---------C----ATACATATT-TTCAAATATAAAAATATTCCATTC---------ATTTGGAGGAAGGTAGGATGAAGAAGGT-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA i rheMac3.chr5 C 0 I 10 s macFas5.chr5 186437361 284 + 189454096 CTtgtcagatacttctaattgattgtgatgattttcctgctgagccttggtgtagctttacaaccctactcaacacagccctgcgggcagcaaagccagcgggcaggaattattaagtgagctgaaacTG-GGCTCTAACCTA--GGCTAGACTAAACAATAGGAAGTCAAGGTGATATCTAGGAGT---------C----ATACATATT-TTCAAATATAAAAATATTCCATTC---------ATTTGGAGGAAGGTAGGATGAAGAAGGT-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176052104 284 + 178775436 CTTGTCAGATACTTCTAATTGATTGTGATGCTTTTCCTGCTGAGCCTTGGTGTAGCTTTACAACCCTACTCAACACAGCCCTGCGGGCAGCCAAGCCAGCGGGCAGGAATTATTAAGTGAGCTGAAACTG-GGCTCTAACCTA--GGCTAGACTAAACAATAGGAAGTCAAGGTGATATCTAGGAGt---------c----atacatatt-ttcaaatataaaaatattccattc---------aTTTGGAGGAAGGTAGGATGAAGAAGGT-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132894562 284 + 135778131 CTtgtcagatacttctaattgattgtggtgattttcctgctgagccttggtgtagctttacaaccctactcaacacagccctgtgggcagcaaagccaacaggcaggaattattaagtgagctgaaacTG-GGCCCTAACCTG--GGCTAGACTAAACAATGGGAAGTCAAGGTGATATCTAGGAGT---------C----ATACATATT-TTCAAATCTAAAAATATTCCATTC---------ATTTGGAGGAAGGTAGGATGAGGAAGGC-AGACAGTACTAATATGTCAGCTGGTAAGTAATTATTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188281281 283 - 190850796 CTTGTCACATACTTCTAACTGATTGTGATAACTTTCCTGATGAGCCTTGGGGTGGCTTTACAGC-----TGAACACAGCTCTGCGGGCAGCACAGCCAGTGGGCAGGAACTAGGAAGTGAGCTGAAGCTGCTCCTCTAACCTA--GGCTAGATGAGACGATAGGAAGTCAAGGAG-TATCCAGGATT---------CCACTGTACGTATT-TTCAAATATAAAAATGTTTCATTC---------ATTCGAAGGAAGGTAGGATGAACAAGGT-AGACAGTACTAATATGTCAGCTCCTAAGTGATTATTCA i calJac3.chr3 I 307 C 0 s mm10.chr8 84759558 306 - 129401213 -TTTACACATGTTTCAAGTTGATTCTGCTGGctttccttctgagtcttggtgtagctttacaaccttactcaacacaggcctgcaggcaacAAGGGCATTTGGCAGGCTTCGTTATGTGAGCTGAAGCTGCATCACTGAGAAGATGGAGACACTGAAGAACAGAGACCCAACATTCATTCTAGTAGTAAATTCCGCT----GTCCTTACCAATCAAATAGTGAGTTTTAATTTTCTAGAGAGGGGTGTGGAGAAAAGTAGAAAAGACAGTCTGAGATCATACCAACATACCACATAGTAAGTGATAATTGA i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I a score=4255.000000 s hg38.chr4_KI270785v1_alt 93752 2 + 119912 GT s panTro4.chr4 190361073 2 + 193495092 GT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335056 2 + 198332218 GT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297707 2 + 115148730 GT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186437645 2 + 189454096 AT i macFas5.chr5 C 0 I 6 s papAnu2.chr5 176052388 2 + 178775436 AT i papAnu2.chr5 C 0 I 6 s chlSab2.chr7 132894846 2 + 135778131 GT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188281564 2 - 190850796 GT i calJac3.chr3 C 0 I 1 s mm10.chr8 84759864 1 - 129401213 -T i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I e rheMac3.chr5 181099471 10 + 184069350 I a score=920.000000 s hg38.chr4_KI270785v1_alt 93754 4 + 119912 GCCA s panTro4.chr4 190361075 4 + 193495092 GCCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335058 4 + 198332218 GTCG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297709 4 + 115148730 GCCA i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132894848 4 + 135778131 GCCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188281567 3 - 190850796 GCC- i calJac3.chr3 I 1 C 0 s mm10.chr8 84759865 4 - 129401213 GTTT i mm10.chr8 C 0 C 0 e canFam3.chr16 15762583 855 - 59632846 I e papAnu2.chr5 176052390 6 + 178775436 I e macFas5.chr5 186437647 6 + 189454096 I e rheMac3.chr5 181099471 10 + 184069350 I a score=172342.000000 s hg38.chr4_KI270785v1_alt 93758 146 + 119912 TTTTTGCTGGGAATTTACCTGGATACAGATGGGCCTCCTGGAAGA--------------------------ATGTGG----------CATT----------------------------TCACCT-----CCTCTG-----TACAGGGACTT-----------------------------------------------------------------ATGACTTCACTGC-AAGAAAATAG-TTA---ATATATAAC--------------------ATAATCAGTAAGCG-TTAAAAC----ACTCCATAATAT s panTro4.chr4 190361079 146 + 193495092 TTTTTGCTGGGAATTTACATGGATACAGATGGGCCTCCTAGAAGA--------------------------ATGTGG----------CATT----------------------------TCACCT-----CCTCTG-----TACAGGGACTT-----------------------------------------------------------------ATGACTTCACTGC-AAGAAAATAG-TTA---ATATATAAC--------------------ATAATCAGTAAGCG-TTAAAAC----ATTCCATAATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335062 146 + 198332218 TTTTTGCTGGGAATTTATCTGGATACAGATGGGCCTCCTGGAAGA--------------------------ATGTGG----------CATT----------------------------TCACCT-----CCTCTG-----TACAGGGACTT-----------------------------------------------------------------ATGATTTCACTGC-AAGAAAATAG-TTA---ATATATAAC--------------------ATCATCAGTAAGCG-TTAAAAC----ACTCCATAATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297713 147 + 115148730 TTTTTGCTGGGAATTTACCTGGATACAGATGGGCCTCCTGGAAGA--------------------------ATGTGG----------CACT----------------------------TCACCT-----CCTCTG-----TACAGGGACTT-----------------------------------------------------------------ATGATTTCACTGC-AAGAAAATGG-TTA---ATATACAAC--------------------ATAATCAGTAAGCGTTTAAAAC----ACTCCATAATAT i nomLeu3.chr7b C 0 C 0 s chlSab2.chr7 132894852 147 + 135778131 TTTCTGTTGGGAATTTACCTGGATACAGATGGGCCTTCTGGAAGA--------------------------ATGTGG----------CATT----------------------------TCACCT----CCCCCTG-----TACAGGGGCTT-----------------------------------------------------------------ATGATTTCACTGC-AAGAATATAG-TTA---ATATACAAC--------------------ATAATCAGTAAGCA-TTAACAC----ACTCCATAATAT i chlSab2.chr7 C 0 I 4 s calJac3.chr3 188281570 126 - 190850796 -TTTTGCTGGGGATTTA-------------------CCTGGAAGA--------------------------ATGTGG----------CATT----------------------------ACACCT-----CCACTC-----TGCAGGAGCCT-----------------------------------------------------------------GTGATTTCACTGC-AAGAAAATAG-TTA---ATATAGAAC--------------------ATGATCAGTAAGTG-TTAAAAC----ACTCCATAATAT i calJac3.chr3 C 0 I 4 s mm10.chr8 84759869 290 - 129401213 TATTTGCTTAGGATTTAACTTGATATGGATACAATTCACAGAAAACTCTAGAACACTAGATAtcaacctgtatgtggatcgtgaccacattgggggagtccgtgactctttcacagtggtcacctaagaccatcagaaaaatacaggtaatttcataattgttttttagcagtagcaaaattacagttatgatataggaacgaaaatatggttgaggatcaccacaaccc-aagaaactggatta---aagggtaac--------------------cgcattaggaaggt-tgaaaacAGCTAGTCTAGGGTAT i mm10.chr8 C 0 C 0 s canFam3.chr16 15763438 168 - 59632846 TTTTTGCTGGGGATTTGCCTTGATATGGATATGCTTCTTTAGAGA--------------------------ATCTGG----------CATA----------------------------CTGCTG-----ACCCTG-----T--AGGGGTTT-----------------------------------------------------------------ATGATTTCACAGCTAAGAAAATAG-TTACATACATAAAACaattattaaatatttttttaacaattattaaata-ttaaaaC----ACCATATAATTT i canFam3.chr16 I 855 C 0 e papAnu2.chr5 176052390 6 + 178775436 I e macFas5.chr5 186437647 6 + 189454096 I e rheMac3.chr5 181099471 10 + 184069350 I a score=840.000000 s hg38.chr4_KI270785v1_alt 93904 2 + 119912 -GA----- s panTro4.chr4 190361225 2 + 193495092 -GA----- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335208 2 + 198332218 -GA----- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297860 2 + 115148730 -GA----- i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186437653 2 + 189454096 -GG----- i macFas5.chr5 I 6 C 0 s papAnu2.chr5 176052396 2 + 178775436 -GG----- i papAnu2.chr5 I 6 C 0 s chlSab2.chr7 132895003 2 + 135778131 -GG----- i chlSab2.chr7 I 4 C 0 s calJac3.chr3 188281700 2 - 190850796 -GA----- i calJac3.chr3 I 4 C 0 s mm10.chr8 84760159 2 - 129401213 -GA----- i mm10.chr8 C 0 I 76 s canFam3.chr16 15763606 8 - 59632846 AGAATCAA i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181099471 10 + 184069350 I a score=625209.000000 s hg38.chr4_KI270785v1_alt 93906 178 + 119912 CAAACTTTATAAATATTATTCCAACCCTCTCA----------------CTCGAAATGAAAGAAGATTTCATAGAC-----------AAGAAAGGCTTCTTAGAGACGATAGTATGGTTCATGTCACAAATGTT-AAATGGA---TGCAGAAGCATTTGGAATGTAGCGTGCGGGATGCTATGAGTTGGTGTGTCTAAAAATGTTCAACA s panTro4.chr4 190361227 179 + 193495092 CAAACTTTATAAATATTATTCCAACCCTCTCA----------------CTCGAAATGAAAGAAGATTCCATAGAG-----------AAGAAAGGCTTCTTGGAGACGATAGTATGGTTCATGTCACAAATGTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCGTGCGGGATGCTATGAGTTGGTGTGTCTAAAAATGTTCAACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335210 181 + 198332218 CAAACTTTATAAATATTATTCCAACCCTCTCA----------------CTTGAAATGAAATAAGATTTTATAGAGAAGTATGTTCAAAGAAAGGCTTCTTGGAGA-------ATG--TCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCATGTGGGATGCTATGAGTTGATGTGTCTAAAAATGTTCAACA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111297862 190 + 115148730 CAAACTTTATAAATATTATTCCAACCCTCTCA----------------CTCGAAATGAAATAAGATTTTATAGAGAAGTATGTTCAAAGATAGGCTTCTTGGGGATGATAGTATTGTTCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATATAGCATGCAGGATACTATGAGTTGATGTGTCTAAAAATGTTCAACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181099481 190 + 184069350 CAAGCTTTATAAATATTATTTCAACCCTCTCA----------------CTCAAAATGAAATAAGATTTTATAGAGAGGTAGGTTCAAAGAAAGGCTTCTTGTGATTGAAAGTATTGTTCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCATGCGGGATGCTGTGAGTTGATGTGTCTAAAAATGTTCAACG i rheMac3.chr5 I 10 C 0 s macFas5.chr5 186437655 190 + 189454096 CAAACTTTATAAATATTATTTCAACCCTCTCA----------------CTCAAAATGAAATAAGATTTTATAGAGAGGTAGGTTCAAAGAAAGGCTTCTTGTGATTGAAAGTATTGTTCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCATGCGGGATGCTGTGAGTTGATGTGTCTAAAAATGTTCAACG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176052398 190 + 178775436 CAaacttcataaatattatttcaacccTCTCa----------------ctcaaaatgaaataagattttaTAGAGAGGTAGGTTcaaagaaaggcttcttgtgaTTGAAAGTATTGTTCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCATGCGGGATGCTGTGAGTTGATGTGTCTAAAAATGTTCAACG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132895005 190 + 135778131 CAAACTTTATAAATATTATTTCAACTCTCTCG----------------CTCAAAATGAAATAAGATTTTATAGAGAGGTACGTTCAAAGAAAGGCTTCTTGGAGTTGAAAGTATTGTTCATGTCACAAATTTTGAAATGGA---TGCAGAAGCATTTGGAATGTAGCATGCGGGATGCTGTGAGTTGATGTGTCTAAAAATGTTCAACG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188281702 186 - 190850796 CAAACTTTATAAA---TATCTCAACCCTCTCA----------------CTTGAAATGAAATAAGATTTTAGAGAGGAATATATTCAAAGGAAGCCTTCTTGGAGGTGCTGGTATTGTTCATGTCACAAATTTTGAAGTGG----TGCAGAAGCATTTGGAGGATAGCGTGCAGGGTGCTATGAGTTGATGTGTCTAAAAATGTTCAATA i calJac3.chr3 C 0 C 0 s mm10.chr8 84760237 205 - 129401213 CAGTCTTCTAAATTATTATGTCTTCTAAattattattattattattatCTCTACATGGTGTAAGATTCCAGAGAACAGAGTGAGCAGGAAAAAGCTTCCTGGA---GATAACACAACTCATGCCACATGTCTGGAACCTGCTTTTGGAGAAATAGTTAGAATATA-CATTCAGGATGCCATGGGTTGATGTGCCTGAAGAGTTTCATCA i mm10.chr8 I 76 C 0 s canFam3.chr16 15763614 186 - 59632846 CAATCTTTCTA----TTATTCCAACCTTTTTA----------------CTCTAAATGGGATAAGATATCAGAGAAAGGTATATTGAAAGAAAGGCTTCTTGGGGATGATAATAGTGTTCAAGACCCAAGTTTCAAAAGTGA---TGCAGAAGCACTAGGAATAGAGCATCCAGGATGCCATGAACTGATGTGTCTGAAAATTTTCAACA i canFam3.chr16 C 0 I 192 a score=1107666.000000 s hg38.chr4_KI270785v1_alt 94084 310 + 119912 AAATCAATTGTAGACTTTACCTCACAAGAAAGTCTTGACTTTTGCAATGGAGAAAAGTGGTGTTTTATAGAAATACTTTAAAAACAATTTTTTTAAAAATTACAGGTATTTCAGAAAATGAGAGATAACTACAGCCAAATAATTCACATTAAA-TTGTTGATTGAATTGACAAAGTAATTTAATGTGTTTCTATTAGATGCAAGGCAGTGTGCTGGATCATTGAAGTATATAAAAATGTATCTGCTTGTAAAAGCAGATAATCTAGAGATGAAT-GTGGTAGCTAATGAAATTACAAATTAGTTTATGATAT s panTro4.chr4 190361406 310 + 193495092 AAATCAATTATAGACTTTACCTCACAAGAAAGTCTTGACTTTTGCAATGGAGAAAAGTGGTGTTTTATAGAAATACtttaaaaataatttttttaaaaattaCAGATATTTCAGAAAATGAGTGATAACTACAGCCAAATAATTCACATTAAA-TTGTTGATTGAATTGACAAAGTAATTTAATGTGTTTCTATCAGATGCAAGGCAGTGTGCTGGATCATTGAAGTATATAAAAATGTACCTGCTTGTAAAAGCAGATAATCTAGAGATGAAT-GTGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335391 309 + 198332218 AAATCAATTATAGACTTTACCTCAGAAGAAAGTCTTGACTTTTTCAGTGGAGAAAAGTGGTGTTTTATAGAAATACTTTAGAAACAA-TTTTTTAAAAATTACAGGTATTTCAGAAAATGAGATACAACTACAGCCAAATAATTCACATTAAA-TTGTTGATTGAATTGACAGAGTAATTTAATGTGTTTCTATTAGATGCAAGGCAGTGTGCTGGATCACTGAAGTATATAAAAATGTACCTGCTTGTAAAAGCAGATAATCTAGAGATGAAT-GCGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111298052 308 + 115148730 AAATCAATTATAGACTTTACTTCAGAAGAAAGTCTTGACTTTTTCAATGGAGAAAAGTGGTGTTTTATAGAAATACTTTGGAAAC--TTTTTTTTAAAATTACAGGCATTTCAGAAAATGAGAGATAACTGCAGCCAAATAATTCACATTAAA-TTATTGATTGAATTGACAAAGTAATTTAATGTGTTTCTATTAGATGCAAGGCAGTGTGCTGGATCATTGAAGTAAATAAAAATGTACCTGCTTGTAAAAGCAGATAATCTAGAGATGAAT-GCGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181099671 311 + 184069350 AAATCAATTATAGACTTTAGCTCAGAAGAAAGTCTTGACTTTTTCAATGGATAAAAGTGTTGTTTTATAGAAATACTTTAGAAACATTTTTTTAAAAAATTACAGGTATTTCAGAAAATGAGAGATAACTACAACCAAATAATTCACATTAAAGTTATTGATTGAATTGACGGAGTAATTTAATGTGTGTCTGTTAGATGCAAGGCAGTGTGCTGGACCACTGAAGTATGTAAAAATGTAACTGCTTGTAAAAGCCGATAATCTAGAGTTGAAT-GCGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186437845 311 + 189454096 AAATCAATTATAGACTTTAGCTCAGAAGAAAGTCTTGACTTTTTCAATGGATAAAAGTGTTGTTTTATAGAAATACTTTAGAAACATTTTTTAAAAAAATTACAGGTATTTCAGAAAATGAGAGATAACTACAACCAAATAATTCACATTAAAGTTATTGATTGAATTGACGGAGTAATTTAATGTGTGTCTGTTAGATGCAAGGCAGTGTGCTGGACCACTGAAGTATGTAAAAATGTAACTGCTTGTAAAAGCCGATAATCTAGAGTTGAAT-GCGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176052588 311 + 178775436 AAATCAATTATAGACTTTAGCTCAGAAGAAAGTCTTGACTTTTTCAATGGATAAAAGTGTTGTTTTATAGAAAtactttagaaacatttttttaaaaaattacaggtaTTTCAGAAAATGAGAGATAACTACAACCAAATAATTCACATTAAAGTTATTGATTGAATTGACGGAGTAATTTAATGTGTGTCTGTTAGATGCAAGGCAGTGTGCTGGACCACTGAAGTATGTAAAAATATAACTGCTTGTAAAAGCCGATAATCTAGAGTTGAAT-GCGGTAGCTAATGAAATTACAAATTAGTTTATGATAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132895195 311 + 135778131 AAATCAATTATAGACTTTAGCTCAGAAGAAAGTCTTGACTTTTTCAATGGATAAAAGTGTTGTTTTATAGAAATACTTTAGAAGCTTTTTTTAAAAAAATTACAGGTATTTCAGAAAATGAGAGATAACTACAACCAAATAATTCACATTAAAGTTATTGATTGAATTGATGAAGTAATTTAATGTGTGTCTGTTAGATGCAAGGCAGTGTGCTGGACCACTGAAGCATGTAAACATGTAACTGCTTGTAAAAGCTGATAATCTAGAGTTGAAT-GCGATAGCTAATGAAATTACAAATTAGTTTATGATAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188281888 302 - 190850796 AAATCAGCTGAAGACTTTGCCTCAGGAGAAAGACTTGGATTTTT-AGTGGAGAAGAGTGCTGTTTTATAGGAACAATTGACATACAATTTTTTTT--AATTACAGGTATTTCATAAAATGTGAGATAACTCTAGCCAAATAATCCACATTGAAGTTGTTGATTGAATTGACAAAGTAATTTAAT-----TCTATTAGATGCAA-GCGGTGTGCTGGGCCATTGAAGTGCATAAAAATGCACCTGCTTGTAACAGCAGATAATCTAGAGGCGAAT-GCAGTAGCTAATGAAATGACAAATTAGTTTATGATAC i calJac3.chr3 C 0 C 0 s mm10.chr8 84760442 281 - 129401213 GAATCAATTTTAGATTTCCTCTC-GGAGAAAGATTCGACTCTTCCAATGCAGAAAAGTACTGTTTTATTGAAATACTTTAGAAATAACTTTT---AAGATTATAGACATTTTAAAAAATGAGAGATAACTGGAGCCAAATAATTCGTGCTAAAGATGCTGATTGAATTGGCAAAATGATTTCATGAGTTGCTGTGAAATGCAAGGCTGTGTCCTAGACTATTGGAGAATACAAAA----GAATGCTTGT-----------ATACAGAG------------AGCTAATGATGAAACAAATTAGCTTTTGGCTC i mm10.chr8 C 0 C 0 s canFam3.chr16 15763992 292 - 59632846 ATATCACTTTTAGTTTTTATCTCAGAAGAAAGACCTGACTTTTTCAATGGAGAAAAATACTTTTTTATAGAAATA-------------GTTTTTGAAGGTTATAGATATTTCACAAAATGAGAGAT---TATGGCCAAATAATTCACACTAAATATGCTGATTCAGTTGACAAA--AGTTTAATGAGCTCCTGTTAGGTACAGGCCAGAG--CTAGATCTTTGGAATATATAAAAATGCACTTGCTGGTAAAAGCAGATAATCTAGAGACGAATAAAGGTAGCTAATGATGTTACAAATTAACTTATGATAC i canFam3.chr16 I 192 C 0 a score=554788.000000 s hg38.chr4_KI270785v1_alt 94394 204 + 119912 GTGCAAATGTGGGAA--ATAAAATCACAAAAACA---ATA--AGTAATTCTAATCAAGA-----TACCTGTCAAG-TTCAAAAAAGCTTCTAAGAACTATGGTACCTTGGAATCTGATTTAATTCTGAAAATCCACCACATTAATTATGTCTTTCAAATTTAAAAACTAAGTTTCTAAATGCATCAATGGCCCTTAGAATAAAAACTCAGAACATTT s panTro4.chr4 190361716 204 + 193495092 GTGCAAATGTGGGAA--ATAAAATCACAAAAACA---ATA--AGTAATTCTAATCAAGA-----TACCTGTCAAA-TTCAAAAAAGCTTCTAAGAACTATGGTACCTTGGAATCTGATTTAATTCTGAAAATCCACCACATTAATTATGTCTTTCAAATTTAAAAACCAAGTTTCTAAATGCATCAATGGCCCTTAGAATAAAAACTCAGAACATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335700 207 + 198332218 GTGCAAATGTGGGAA--ATAGAATCACAAAAACAATGATA--AGTAATTCTAATCAAGA-----TACCTGTCAAG-TTCAAAAAAGCTTCTAAGAACTATAGTACCTTGGAATCTGATTTAATTATGAAAATCCACCACATTAATTATGTCTTTGAAATTTAAAAACTAAGTTTCTAAATGCATCAATGGCCCTTGGAATCAAATCTCAGAACACTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111298360 207 + 115148730 GTGCAAATGTGGGAA--ATAGAATCACAAAAACAACGATA--AGTAATTCTAATCAAGA-----TACCTGTCAAG-TTCAAAAAAGCTTCTAAGAACTATAGTACCTTGGAATCTGATTTAATTCTGAAAATCTACCACATTAATTATGTCTTTGAAATTTAAAAACTAAGTTTCTAAATGCATCAATGGCCCTTGGAATAAAAACTCAGAACATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181099982 203 + 184069350 ATGCAAATGTGGGAA--ATAGAGTCACAAAAACA---ACA--AGTAATTCTAATCAAGA-----TACATGTCAAG-TTC-AAAAAGCTTCTAAGAACTATGGTACCTTGGAACCTGATTTAATTCTGAAAATCCGCCACATTAATTATATCTTTAAAATTTAAAAGCTAAGTTTCTAAATGCATCAGTGGCCCTTGGAATAAAAACCCAGAACTTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186438156 203 + 189454096 ATGCAAATGTGGGAA--ATAGAGTCACAAAAACA---ACA--AGTAATTCTAATCAAGA-----TACATGTCAAG-TTC-AAAAAGCTTCTAAGAACTATGGTACCTTGGAACCTGATTTAATTCTGAAAATCCGCCACATTAATTATATCTTTAAAATTTAAAAGCTAAGTTTCTAAATGCATCAGTGGCCCTTGGAATAAAAACCCAGAACTTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176052899 203 + 178775436 GTGCAAATGTGGGAA--ATAGAGTCACAAAAACA---ATA--AGTAATTCTAATCAAGA-----TACATGTCAAG-TTC-AAAAAGCTTCTAAGAACTATGGTACCTTGGAACCTGATTTAATTCTGAAAATCCGCCACattaattatatctttaaaatttaaaagctaagTTTCTAAATGCATCAGTGGCCCTTGGAATAAAAACTCAGAACTTTT i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188282190 207 - 190850796 GTGCTAATGTAGGAA--ATAGAATCACAAAAACAATGATA--AGTAATTCTAATCAAAA-----TGCCTTTCAAG-TTCAGAAAAGCTTCTAAGAACTATGGTACTTTGGAACCTATTTTAATTCTGAAAATCCATCACATGAATTATGTTTTTGAAATTTAAAAACTGAGTTTATAAATGCGTCACTGGCCCTTAGCCTAACAACTCAGAACCTTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84760723 185 - 129401213 ATGTAAATGAGGGGGGCACAGAACCACAAAAGTG---A-A--AATAATTCTAATTAAGGATTTTTTGTTTTATGA-TTCAACAAAAGCTCCAAGAGC-------------------------TTCGAGAAATCCAATACATTAACTGTGCTTGCGACACGCTCCAACTAAGTTTGTAAACACATCAATGGACTCTTCCGTTCAAACTCAGACTCTTC i mm10.chr8 C 0 C 0 s canFam3.chr16 15764284 207 - 59632846 ATGCAAATGAGAGGC-CATTGAATCATAAAAGAC---ATGATAGAAATTCCAATGGAGA-----TATCAGTCAAGATTCAACAAAGGTTCTGAGAGCTGCAGTACTTAAGAACTTGATTTA-TTCTGAAAAGCTACCACCTTAACTATTTCCACGAAATTTAAAAGCTATGTTTATAAATGCATTAGTGGACCTGGGAATAAAAACTAAGAATGTTg i canFam3.chr16 C 0 I 243 e chlSab2.chr7 132895506 0 + 135778131 C a score=94708.000000 s hg38.chr4_KI270785v1_alt 94598 34 + 119912 AGAAA-CCCCTGGTAATGACAGGATCATGTCTAAG s panTro4.chr4 190361920 34 + 193495092 AGAAA-CCCCTGGTAATGACAGGATCATGTCTAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335907 35 + 198332218 AGAAACCCCCTGGTAATGACAGGATCGTGTCTAAG i ponAbe2.chr4 C 0 I 2 s nomLeu3.chr7b 111298567 34 + 115148730 AGAAA-CCCCTGGTAATGACAGGATCACGTCTAAG i nomLeu3.chr7b C 0 I 31 s rheMac3.chr5 181100185 34 + 184069350 AGAAA-CCCGTGGTAATGACAGGATCGTGTCTAAG i rheMac3.chr5 C 0 I 2 s macFas5.chr5 186438359 34 + 189454096 AGAAA-CCCGTGGTAATGACAGGATCGTGTCTAAG i macFas5.chr5 C 0 I 2 s papAnu2.chr5 176053102 34 + 178775436 AGAAA-CCCGTAGTAATGACAGGATCGTGTCtaag i papAnu2.chr5 C 0 I 2 s calJac3.chr3 188282397 34 - 190850796 AAAAA-TCCCTGGTAATGACAGAGTTGTGTCTAAG i calJac3.chr3 C 0 I 2 s mm10.chr8 84760908 32 - 129401213 AGAAA---AGTGTCAATGACAAGTTACTGACTAAG i mm10.chr8 C 0 I 206 s canFam3.chr16 15764734 33 - 59632846 AGAAA-TTCCTGGTAATGACTGGA-AGTATTTAAG i canFam3.chr16 I 243 I 2 e chlSab2.chr7 132895506 0 + 135778131 C a score=373483.000000 s hg38.chr4_KI270785v1_alt 94632 145 + 119912 TTTAAAATAATACGGTTTATTCTCACTAGCCTGCAGAATTGTTTATAATCTCAAGTCGTACTTCAGA-----ACATAGACAAAAGGCCATCCCTTTTTGGGGTTTAGATAGAAATAGCTGATTTCACCTGAACTCAGCAACCTTGTAAAT s panTro4.chr4 190361954 145 + 193495092 TTTAAAATAATACGGTTTATTCTCACTAGCCTGCAGAATTGTTTATGATCTCAAGTCGTACTTCAGA-----ACATAGACAAAAGGCCCTCCCTTTTTGGGGTTTAGATAGAAATAGCTGATTTCAGCTGAACTCAGCAACCTTGTAAAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195335944 145 + 198332218 TTTAAAATAATATGGTTTATTCTCACTAGCCTGCAGAATTGTTTATGATCTCAAGTCCTACCTCAGA-----ACATAGACAAAAGGCCCTCCCTTTTTGGGGTTTAGATAGAAATAGTTGATTTCAACTGAACTCAGCAACCTTGTAAGT i ponAbe2.chr4 I 2 C 0 s nomLeu3.chr7b 111298632 145 + 115148730 TTTAAAATAATATGGTTTATTCTCACTAGCCTGCAGAATTGTTTATGATCTCAAGTCCTACTTCAGA-----ACATAGACAAAAGGCCCTCGCTTTTTGGGGTTTATATAGAAATAGTTGATTTCAACTGAACTCAGCAACCTTGTAAGT i nomLeu3.chr7b I 31 C 0 s rheMac3.chr5 181100221 145 + 184069350 TTTAAAATAATATGATTTATTCTCACTAGCCTGCAGAATTGTTTATCATCTCAAGTCCTACTTCAGA-----ACATAGACAAAAGGTCCTCCCTGTTCTGGGTTTACATAGAAATAGTTGATTTCAACTGAACTCAGCAACCTTGTAAAT i rheMac3.chr5 I 2 C 0 s macFas5.chr5 186438395 145 + 189454096 TTTAAAATAATATGATTTATTCTCACTAGCCTGCAGAATTGTTTATCATCTCAAGTCCTACTTCAGA-----ACATAGACAAAAGGTCCTCCCTGTTCTGGGTTTAGATAGAAATAGTTGATTTCAACTGAACTCAGCAACCTTGTAAAT i macFas5.chr5 I 2 C 0 s papAnu2.chr5 176053138 144 + 178775436 tttaaaataatatgatttattCTCA-TAGCCTGCAGAATTGTTTATCATCTCAAGTCCTACTTCAGA-----ACATAGACAAAAGGTCCTCCCTGTTCTGGGTTTAGATAGAAATAGTTGATTTCAACTGAACTCAGCAACCTTGTAAAT i papAnu2.chr5 I 2 C 0 s calJac3.chr3 188282433 144 - 190850796 TTTAAAATAATATGATTT-TTCTCACTAACCTGCAGGAGTATTTATGATCTCAGGTTCTACTTCACA-----ACATAGACAAAAGATCCTCCCTTTTTTGGGTTTGGATAGAAAGAGTTGATTTCAACTGAACTCAGAGGGCTTGTGAAT i calJac3.chr3 I 2 I 4 s canFam3.chr16 15764769 148 - 59632846 CTTAGGATAATGTGCTTTATTCTCACAAAACTATAGAATTGTTAATGGACTTACGTCCTCCCTCAGATGAGGACAAAGACAAAAAA--CACATTTGTTTGTTTTTAGATAAGAGTAGTTGATTCCAACTGGATTCAGCTACCTTTTAAAT i canFam3.chr16 I 2 C 0 e mm10.chr8 84760940 206 - 129401213 I e chlSab2.chr7 132895506 0 + 135778131 C a score=312084.000000 s hg38.chr4_KI270785v1_alt 94777 153 + 119912 AGCCGTTTCTATGAAATATATCTGCTCACTTGGATAAGAGCCAAGTTTCACAAATTACTAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCCAAAACAGGCAA----TGTGATAATTCAATATTTTGCTGTTGAT---GTGTTTCGAGAGCCAGCA s panTro4.chr4 190362099 153 + 193495092 AGCCGTTTCTATGAAATATATCTGCTCACTTGGATAAGAGCCAAGTTTCACAAATTACTAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCAAAAACAGGCAA----TGTGATAATGCAATATTTTGCTGTTGAC---GTGTTTCGAGAGCCAGCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336089 152 + 198332218 AGCCATTTCTATGAAATATATCTGCTCACTTGGATAAGAGCCAAGTTTCAC-AATTACTAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCAAAAACAGGCAA----TGTGATAATTCAATATTTTGCTGTTGGC---ATGTTTCGAGAGCCAGCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111298777 153 + 115148730 AGCCATTTCTATGAAATATATCTGCTCACTTGGATAAGAGCCAAGTTTCACAAATTACCAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCAAAAACAGGCAA----TGTGATAACTCAATATTTTGCTGTTGAC---GTGTTTCAAGAGCCAGCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100366 153 + 184069350 AGTCGTTTCTATGAAATATATATGCTTACTTGGATAAGAGCCAAGTTTCACAAATTGCTAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCAAAAACAGGCAA----TGTGATAATTCAATATTTTGCTGTTGAC---GTGTTTCGAGAGCCAGCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186438540 153 + 189454096 AGTCGTTTCTATGAAATATATATGCTTACTTGGATAAGAGCCAAGTTTCACAAATTGCTAATGCTGGATCTAAGTTGACTAGTGAAACTTATTCCAAAAACAGGCAA----TGTGATAATTCAATATTTTGCTGTTGAC---GTGTTTCAAGAGCCAGCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053282 153 + 178775436 AGTCGTTTCTATGAAATATATATGCTCACTTGGATAAGAGCCAAGTTTCACAAATTGCTAACGCTGGATCTAAGTTGACTAGTGAAACTTACTCCAAAAACCGGCAA----TGTGATAATTCAATATTTTGCTGTTGAC---GTGTTTCGAGAGCCAGCA i papAnu2.chr5 C 0 C 0 s canFam3.chr16 15764917 160 - 59632846 AGCCAATCCTGTAAAAGCCACCTGTTTCCTGTGATAGGCACTGAGCCTGACCAATGACTAAAGCTAGACAGATGTTGACTAGTGGAGCTTATTCCAAAGACAAGTGATCTGTCTGGCAATTTGGTGGTTTGTGGGCAACACTGTGTTTTGAAAAATATCA i canFam3.chr16 C 0 C 0 e mm10.chr8 84760940 206 - 129401213 I e calJac3.chr3 188282577 4 - 190850796 I e chlSab2.chr7 132895506 0 + 135778131 C a score=355255.000000 s hg38.chr4_KI270785v1_alt 94930 158 + 119912 CACAGTGTGCATTTCCCGGTTGCTCCCAGCTTATTTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTTCCTG-TGGACAGGAATTTACACAAAAAACCAGGTGAAATTTAC-TTTTTTGGTGGAAAA--ATATATATGTATGACTGGCTTAAAGTCGT- s panTro4.chr4 190362252 158 + 193495092 CACAGTGTGCATTTCCCGGTTGCTCCCAGCTTATTTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTTCCTG-TGGACAGGAATTTACACAAAAAACCAGGTGAAATTTAC-TTTTTTGGTGGAAAA--AAATATATATATGACTGGCTTAAAGTCGT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336241 155 + 198332218 CACAGTATGCATTTCCCGGTCGCTCCCTGCTTAGCTTGCCACAGA-CCGACAGAGACCAGACTTCAAGATGTTCCTG-TGTACAGGAATTTACACAAAAAACCAGCTGAAATTTAC-TTTTTTGGTGGAAAA----ATATATATATGACTGGCTTAAAGTCA-- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111298930 155 + 115148730 CACAGTATGCATATCCTGGTTGCTCCCAGCTTAGCTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTTCCTG-TGGACAGGAATTTACACAAAAAACCAGCTGAAATTTAC-TTGTTTGGTGGAAAA----ATATATATATGACTGGCTTAAAGTCG-- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100519 158 + 184069350 CACAGCATCCTTTTCCCGGTTGCTCCCAGCTTAGCTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTT-CTG-TGGACAGGAAATTACACAAAAAACCAGCTGAAATTTAC-TTTTTTGATGAAAAAATATATATATATATGACTGGCTTAAAGTTG-- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186438693 156 + 189454096 CACAGCATCCTTTTCCCAGTTGCTCCCAGCTTAGCTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTT-CTG-TGGACAGGAAATTACACAAAAAACCAGCTGAAATTTAC-TTTTTTGATGGAAAA--AAATATATATATGACTGGCTTAAAGTTG-- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053435 158 + 178775436 CACAGCATCCTTTTCCCGGTCGCTCCCAGCTTAGCTTGCCACAGA-CCTACAGAGACCAGACTTCAAGATGTTCCTG-TGGACAGGAAATTACACAAAAACCCAgctgaaatttac-ttttttggtggaaaaa-atatatatatatgactggCTTAAAGTTG-- i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188282581 159 - 190850796 CACAGTGTGCATTTCCGGGTGGCTCCCAGCTTAGCTTGCCCCAGAGCCTGCAGAGACAGGACTTCAAGATGTCCCTG-TGGGCGGGAAATGACACAAAGAATCAGCTGAAGTTTATGTTTTTTAGAGGAAAA--AAATAGATGTATGGCTGGCTTAAAGTAC-- i calJac3.chr3 I 4 C 0 s canFam3.chr16 15765077 146 - 59632846 CACAGCATCCAATCCC--GTTGCTCCCGGTTTG--------CACT-CCCTCAGAGCCCTGACTTTGAGAGGTCCCTGCCAGGCAGACAATTAGACAAAGAACCAGCTGCAATCCAC-TGTTCAGGTGGGAAA-----TAGATACATGATCGACCTAAAGTAA-T i canFam3.chr16 C 0 I 204 e mm10.chr8 84760940 206 - 129401213 I e chlSab2.chr7 132895506 0 + 135778131 C a score=407753.000000 s hg38.chr4_KI270785v1_alt 95088 183 + 119912 TAAGTGAGGTGATCTTAATGATAGGACCAAATCCATTAGAAAACTACTTTGCAAATGAAGTTTAAAAAATTTTAT-TTTCAACTAGTTTTTAAAAGACTTCAATTCAGTAAGGAGCACATTAGAAAGATCTCAGTTTATCTCAAGTATAGGCTATATCTAAAGAAACTTGATTATTTATTAAGT s panTro4.chr4 190362410 183 + 193495092 TAAGTGAGGTGATCTTAATGATAGGACCAAATCCATTAGAAAACTACTTTGCAAATGAAGTTTAAAAAATTTTAT-TTTCAACTAGTTTTTAAAAGACTTCAATTCAGTAAGGAGCACATTAGAAAGATCTCAGTTTATCTCAAGTATAGGCTATATCTAAAGAAACTTGATTATTTATTAAGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336396 179 + 198332218 TAAGTGAGGTGATCTTAATGATAGGACCAAATCCATTAGAAAACTATTTTGAAAATGAAGTTTAAAAAATTTTAT-TTTCAACTAGTTTTTAAAAGACTTCAATTCAGTAAGGAGCACATTAGAAGGATCTCAGTTTATCTCATGTATAGGCTATGTCTAAACAAACTTGA----TTATTAAGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111299085 179 + 115148730 TAAGTGAGGTGATCTTAATGATAGGACCAAATCCATTAGAAAACTACTTTGCAAATGAAGTTTAAAAAATTTTAT-TTTCAACTAGTTTTTAAAAGACTTTAATTCAGTAAGGAGCACATTAGAAAGATCTCAGTTTGTCTCACGTATAGGCTATATCTAAACAAACTTGA----TTATTAAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100677 173 + 184069350 TAAGTGAGGTAATCTTAATGATAGGACCAAATCCATTACAAAAATACTTAGCAAATGAAGTTTAAAAATTTTTAT-TTTCAACTAGTTTTTAAAAGACTTCAGTT-----AGGAGCACATGAGAAAGATCTCAGCTTAGCTCATGTATAGGCAATATCTAAAAAAACTTGATTATTTA-----T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186438849 178 + 189454096 TAAGTGAGGTAATCTTAATGATAGGACCAAATCCATTACAAAAATACTTAGCAAATGAAGTTTAAAAATTTTTAT-TTTCAACTAGTTTTTAAAAGACTTCAGTT-----AGGAGCACATGAGAAAGATCTCAGCTTAGCTCATGTATAGGCAATATCTAAACAAACTTGATTATTTATTAAGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053593 178 + 178775436 TAAGTGAGGTGATCTTAATGATAGGACCAAGTCCATTACAAAAATACTTAGCAAATGAAgtctaaaaatttttat-tttcaactagTTTTTAAAAGACTTCAGTT-----AGGAGCACATGAGAAAGATCTCAGCTTAGCTCATGTACAGGCAATATCTAAACAAACTTGATTATttattaagt i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188282740 162 - 190850796 AAAGTGAGGTGATCTTA---ACAGGACCAAATCTGTCAGAAAAAGATTTTGCAAAT-AAGTTTAA--------------CAACCAGTTTTTAAAAGACTTCAATTCAGTAAGGAGCACATTAGAAAGATCTCCGCTTACCTCATGTATCGGCTATATCTAAATACACTTGA----TTATTACAT i calJac3.chr3 C 0 I 351 s canFam3.chr16 15765427 181 - 59632846 TAAATGAAGTGATCTCAAAAATAGAACCAACTCGAACAGAAAAAAAAATTGAAAATCAGATTTTAAAAAGTTCATGGTTCAACTAATTTTTGAAAGATTTTAATTTATTGAGGAGCAGATGAGGGACATCTCAGCATTTCTCACACATGGGACACATCTACA---ACTTAATGATTCACTGAAC i canFam3.chr16 I 204 C 0 e mm10.chr8 84760940 206 - 129401213 I e chlSab2.chr7 132895506 0 + 135778131 C a score=116785.000000 s hg38.chr4_KI270785v1_alt 95271 45 + 119912 TTTCTTTC---TTATTAAGATGTCTTGGCTATACAGCAAG-AAGCATAA s panTro4.chr4 190362593 45 + 193495092 TTTCTTTC---TTATTAAGATGTCTTGGCTATACAGCAAG-AAGCATAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336575 45 + 198332218 TTTCTATC---TTATTAAGATGTCTTGGCTATACAGCGAG-AAGCATAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111299264 45 + 115148730 TTTCTGCC---TTATTAAGATGTCTTGGCTATACAGTGAG-AAGCATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100850 45 + 184069350 TTTCTTTC---TTATTAAGATGTCTTGGCTATATAGCAAG-AAGCATAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186439027 45 + 189454096 TTTCTTTC---TTATTAAGATGTCTTGGCTATATAGCAAG-AAGCATAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053771 45 + 178775436 tttctttc---ttattaagaTGTCTTGGCTATATAGCAAG-AAGCATAA i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188283253 48 - 190850796 TTTCTTTCTTATTATTAAGAAGTCTTGGCTGTATAGCAAA-AAGCATAA i calJac3.chr3 I 351 C 0 s canFam3.chr16 15765608 45 - 59632846 -TTTCTTA---TTATTAAGATATTTTTACTATAGAGAGAATAGGCATAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84760940 206 - 129401213 I e chlSab2.chr7 132895506 0 + 135778131 C a score=140571.000000 s hg38.chr4_KI270785v1_alt 95316 41 + 119912 GTAACTCTCCATTGCATATTGGATCCCAC-GTTTTGTGGATA s panTro4.chr4 190362638 41 + 193495092 GTAACTCTCCATTGCATATTGGATCCCAC-GTTTTGTGGATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336620 41 + 198332218 GTAACTCTCCGTTGCATATTGGATCCCAC-GTTTTGTGGATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111299309 41 + 115148730 GTAACTCTCCATTGCATATTGGATCCCAT-GTTTTGTGGATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100895 41 + 184069350 GTAACTCTCCATTGCATATTGGATCCCAC-GTTTTGTGGATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186439072 41 + 189454096 GTAACTCTCCATTGCATATTGGATCCCAC-GTTTTGTGGATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053816 41 + 178775436 GTAACTCTCCATTGCATATTGGATCCCAC-GTTTTGTGGATA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132895506 41 + 135778131 GTAACTCTCCATTGCATATTGGATCCCAC-ATTTTGTGGATA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188283301 37 - 190850796 GTAATT----GTTGCATATTGGATTCCAC-TTTTTGTGGATA i calJac3.chr3 C 0 I 259 s canFam3.chr16 15765653 40 - 59632846 GAAACTCT--GTTGCATATTGGATCTCACTTTTTTGCAGGTA i canFam3.chr16 C 0 C 0 e mm10.chr8 84760940 206 - 129401213 I a score=801488.000000 s hg38.chr4_KI270785v1_alt 95357 242 + 119912 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAAATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGATGCGTGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCGTAAATCTGCTTTCTCTTTATTGAATATATTCAAACGTATCA------CAGCTATTG s panTro4.chr4 190362679 242 + 193495092 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACTAAAAATAGAACCAAATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGATGCGTGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCCTAAATCTGCTTTCTCTTTATTGAATATATTCAAACGTATCA------CAGCTATTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336661 242 + 198332218 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAAATACGTAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGACGCGTGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCGTAAATATGCTTTCTCTTTACTGAATATATTCAAATGCATCA------CAGCTATTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111299350 242 + 115148730 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAAATACATAGCTATGACTGAAGTAAAG-TTCTTGCTATATGGTAATGCTTCTTGCATTTGGTGAATCTGAAGATGTGTGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCATAAATCTGCTTTCTCTTTGTTGAATATATTCAAACGTATCA------CAGCTAGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181100936 242 + 184069350 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAGATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGATGCATGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTTCTTAAGGTTTGACTATGGAATGTATGAATTCGTAAATCTTCTTTCTCTTTATTGAATATATTCAAACCTATCA------CAGTTGTTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186439113 242 + 189454096 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAGATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGATGCATGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCGTAAATCTGCTTTCTCTTTATTGAATATATTCAAACCTATCA------CAGTTGTTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176053857 242 + 178775436 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAGATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATGCTTCTTGCATTTGGTCAATCTGAAGATGCATGACATCAAGCCTCACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCGTAAATCTGCTTTCTCTTTATTGAATATATTCAAACCTATCA------CAGCTGTTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132895547 242 + 135778131 --TGAAAGAGTTAGTTTTAGAAGAAATGTCATAACCAAAAATAGAACCAGATACATAGCTATGACTGAAGTAAAG-TTCTTGCTGTATGGTAATACTGCTTGCATCTGATCAATCTGAAGATGCGTGACATCAAGCCTGACACAGTCAGTTTAGCATAGTCTCCTTAAGGTTTGACTATGGAATGTATGAATTCATAAATCTGCTTTCTCTTTATTGAATATATTCAAACCTATCC------CAGCTGTTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188283597 247 - 190850796 --TGAAAGAGTTAGTTTTAGAGAAAATGTCATAACTAAAAGTAGAACCAAACACATAGCTATCACTTAAGGAAAA-TTCTTGCCGTGTGATAATGCTTCTTGCATTTGGTCAGTCTGAAGGAGCATGACATCAAGCCTGACCCATTCAGCTTAGCATAGTCTCCTTAAGGTTTGACTGTGGAATGTGTAAAGTAATGAATCTGCTTTCTCTTTATTGAGGATATTC-AGTGTAGCAACTGGCCAGCTGCTG i calJac3.chr3 I 259 C 0 s canFam3.chr16 15765693 215 - 59632846 GGTAAA------AGTTTTAGAAGAAATATGATAATTAAATATGGAATCAAACACATAG-TATTACTCAAAGAAAGAATTTTGCT-TGTGGTAATGCTTCTTGCATTTCATCAGTCTAAGGTAATATGACATTGAGCCTCGTACTTTCTCTGTA-------------AAGGTTTGGCTACGCAATATACAAATCAGTAAATTTTCTTTCTCTTTATGGTACATATTCAAACACATTG--------------- i canFam3.chr16 C 0 C 0 e mm10.chr8 84760940 206 - 129401213 I a score=3125386.000000 s hg38.chr4_KI270785v1_alt 95599 936 + 119912 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGTACACAACCCAGGAGCCATAT----TTTCCTCTTACTGCCAAAATCACTCTTCAGATATGATTTAGGTGCTTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTACTGCTTTGCTGGGGCAATGCTTTCCAACAATAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAGCACATGA-----CCAGATCCAAGCTTGGAAAATTTGAGTTCATGATCCATTCATTGTTGGAATGTTCAGGGTCAGGAGGTGAAACTTCAAGTCCTAAATTCTAGGTCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccactctgctgtg-tgctctggaggttgacctataggctccacatcaatgcacctccct--tgctttcagactttgagttaggtccaaccaacagggagcaccacctggagactgaaggAGGCAGTAAGCAGGCGGTACCTGCCT--------GCATCT-CTCTCCctt--------------------------------------tccctgatgttctggcaactgcttcctcctgttactcccacaggccgaggagtactaattgcacctcact------gtccccatctccaaaatgctgctctgacc---cctccgcactttcctataa--------tccctcaccttataaacagtccctGTATCACGCTTTTGGCAAATTTATCGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACGGAACTCATACTA-TTTGGCTAAAGAGTTGATGACATTTGTTGTGTTGTCATGGAGTTTGAGGTGCTGGTGC---ACTAC---TTTGCCAGATAATCAGACAACGTATCCCCATTGTGGGATAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATGGTTTTAAAGACAGAATTAAAAATTTCAATAAAAAACATAGTCA s panTro4.chr4 190362921 939 + 193495092 ATGGATTCCATGC-TTGTTTACAAGAGGAGCACATGGAAGTACACAACCCAGGAGCCATAT----TTTCTTCTTACTGCCAAAATCACTCTTCAGACATGATTTAGGTGCTTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTTCTGCTTTGCTGGGGCAATGCTTTCCAACAATAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAGCACATGA-----CCAGATCCAAGCTTGGAAAGTTTGAGTTCATGATCCATTCATTGTTGGAATGTTCAGGGTCAGGAGGTGAAACTTCAAGTCCTAAATTCTAGGTCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccactctgctgtgttgctctggaggttgacctataggctccacatcaatgcacctccct--tgctttcagactttgagttaggtccaaccaacagggagcacaacctggagactgaaagAGGCAGTAAGCAGGCTGTACCTGCCT--------GCATCT-CTCTCCCTTTct----------------------------------ctccctgatgttctggcaactgctgcctcctgttactcctacaggccgaggagtaataattgcacctcact------gtccccatgtccaaaatgctgctctgacc---tgtccgcactttcctataa--------tccctcaccttataaatagtccctGTATCATGCTTTGGGCAAATTTGTCGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACGGAACTCATACTA-TTTGGCTAAAGAGTTGATGACATTTGTTGTGTTTTCACGGAGTTTGAGGTGCTGGTGT---ACTAC---TTTGCCAGATAATCAGACAATGTATCCCCATTGTGGGATAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATGGTTTTAAAGACAGAATTAAAAATTTCAAT-AAAAACATAGTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195336903 940 + 198332218 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGTACACAACCCAGGAGCCATAT----TTTCTTCTTACTGCCAAAATCACTCTTCAGATATGATTTAGGTGCTTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTTCTGCTTTGCTAGGGCAATGCTTTCCAACAGTAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAGCACATGA-----CCAGATCCAAGCTTGGAAAGTTTGAGTTCATGATCCATTCATTGTTGGAATGTTCAGGGTCAGAAGGTGAAACTTCAAGTCCTAAATTCTAGGTCTGTGGCTAGgcaggacatcttccttttg--ccttccagacacccactccacccttctctcctgtgctgtg-tgctctggaggttgacctataggctccacatcaatgcacctccct--tgctttcagacttcgagttaagtccaaccaacagggagcaccacctggagactgaaggaggcagtaagcaggttgtacctccct--------gcatct-ctctccctttct----------------------------------ctccctgatgttctggcaactgctccctcctgttactcctacaggcggaggagtgataattgcacctcact------gtccccaactccaaaatgctgctctgacc---cctccccactttcctataa--------tccctcaccttataaatagtccctgtatcacactttTGGCAAATTTGTTGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACAGAACTCATACTA-TTTGGCTAAAGAGTTGATGACATTTGTTGTGTTTTCATGGAGTTTGAGGTACTGGTGC---ACTAC---TTTGCCAGATAATCAGAAAATGTATCCCCATTGTGGGATAGGGGAAACAAAACAAATGTCTAACTGTTCAAGGGTATTAATTCAGTCATTGTTTTAAAGACAGAATTAAAAATTTCAATAAAAAACATAGTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111299592 940 + 115148730 ATGGATTCCATGCTTTGTTTACGAGAGGGGCACATGGAAGTACACAACCCAGGAGCCATAT----TTTCTTCTTACTGCCAAAATAACTCTTCAGATATGATTTAGGTGTTTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTTCTGCTTCGCTAGGACAATGCTTTCCAACAGTAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAGCACATGA-----CCAGATCCAAGCTTGGAAAGTTTGAGTTCATGATCCATTCATTGTTGGAATGTTCAGGGTCAGGAGGTGAAACTTCAAGTCCTAAATTCCAGCGCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccactctgctgtg-tgctctggaggttgacctataggctccacatcaatgcacctccct--tgctttcagactttgagctaagtccaaccaacaaggagcaccacctggagactgaaggAGGCAGTAAGCAGGCTGTACCTGCCT--------GCATCT-CTCTCCCTTTct----------------------------------ctccctgatgttctggcaactgctccctcctgttactcctacaagccaaggagtaataattgcacctcact------gtccccatctccaaaatgctgctctgacc---cctccccactttcctataa--------tccctcaccttataaatagtccctGTATCACCCTTTTGGCAAATTTATCGGCTGCCCACTGACTATCTGATGC------AGTCTGCAATCACAGAACTCATACTA-TTTGGCTAAAGAGTTGATGACATTTGTTGTGTTTTCATGGAGTTTGAGTTGCTGGTGC---ACTAC---TTTGCCAGATAATCAGAAAATGTATCCCCATTGTGGGATAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATGGTTTTAAAGACAGAATTAAAAATTTCAATAAAAAACATAGTCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181101178 923 + 184069350 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGCACACAACCCAAGAGCTATAT----TTTCTTCTTACTGCCAAAATCACGCTTCAGATTTCATGTAGGTGCGTGGATATTTGCATCTAATTCACTTTACTTACT-TTTTTCTACTTTGCTAGGGCAATGTTTTCCAACAGTAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAACACATGA-----CCAGATCGAAGCTTGGAAAGTCTGAATTCATGATC----CATTGTTGGCATCTTCAGGGTCAGGAGGTGAAGCCTCAAGTCCTAAATTCTAGGTCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccaccctgctgtg-cgctctggaggttgacctataggcttcacatcaaggcacctccct--tgctttcagactttgagttaagtccaaccaacagggagcaccgcctgggggctgaaggaggcagtaagcaggctccacctgcct--------gcatct-ctct----------------------------------------------ctgatgttctggaaactactccctcctgttactcctaagggccgagaagtgataatcgcacctcact------gtccccatctccaaaatgctactctgacc---cctccccactttcctataa--------tccctcacctcgtaaatagtccctGTATCACGCTTTTGGCCAATTTATCGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACAGAACTCATACTA-TTGGGCTAAAGAGTTGATGACATTTGTTCTGTTTTCATGGAGTTTGAAGTGCTGGTGC---ACTAC---TTTGCCAGGTAATCACAAAGTGTATCCCCGTTGTGGGGTAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATCCAGTCATGGTTTTAAA-ACAGAATTAAAAATGTCAATAAAAAACATAGTCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186439355 923 + 189454096 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGCACACAACCCAAGAGCTATAT----TTTCTTCTTACTGCCAAAATCACGCTTCAGATTTGATTTAGGTGCGTGGATATTTGCATCTAATTCACTTTACTTACT-TTTTTCTACTTTGCTAGGGCAATGTTTTCCAACAGTAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAACACATGA-----CCAGATCGAAGCTTGGAAAGTCTGAATTCATGATC----CATTGTTGGCATCTTCAGGGTCAGGAGGTGAAGCCTCAAGTCCTAAATTCTAGGTCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccaccctgctgtg-cgctctggaggttgacctataggctccacatcaaggcacctccct--tgctttcagactttgagttaagtccaaccaacagggagcaccgcctgggggctgaaggAGGCAGTAAgcaggctccacctgcct--------gcatct-ctct----------------------------------------------ctgatgttctggaaactactccctcctgttattcctaagggccgagaagtgataattgcacctcact------gtccccatctccaaaatgctactctgacc---cctccccactttcctataa--------tccctcacctcgtaaatagtccctGTATCACGCTTTTGGCCAATTTATCGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACAGAACTCATACTA-TTGGGCTAAAGAGTTGATGACATTTGTTCTGTTTTCATGGAGTTTGAAGTACTGGTGC---ACTAC---TTTGCCAGGTAATCACAAAGTGTATCCCCGTTGTGGGGTAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATGGTTTTAAA-ACAGAATTAAAAATGTCAATAAAAAACATAGTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176054099 922 + 178775436 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGCACACAACCCAAGAGCCATAT----TTTCTTCTTACTGCCAAAATCACGCTTCAGATTTGATTTAGGTGCGTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTTCTACTTTGCTAGGGCAATGTTTTCCAACagtaag------------aaagaatgaatgaattctagAAAAGGATGAGCACATGA-----CCAGATCGAAGCATGGAAAGTTTGAATTCATGATC----CATTGTTGGCATC-TCAGGGTCAGGAGGTAAAGCCTCAAGTCCTAAATTCTAGGTCTATGGCTAGGCAGGACATCTTCCTTTTG--CCTTCCAGATACCCACTCCACCCTTCTCCACCCTGCTGTG-CGCTCTGGAGGTTGACCTATAGGCTCCACATCAAGGCACCTCCCT--TGCTTTCAGACTTTGAGTTAAGTCCAACCTACAGGGAGCACCACCTGGAGGCTGAAGAAGGCAGTCAGCAGGCTCCACCTGCCT--------GCATCT-CTCT----------------------------------------------CTGATGTTCTGGTAACTACTCCCTCCTGTTACTCCTAAGGGCCGAGAAGTGATAATTGCACCTCACT------GTCCCTATCTCCAAAATGCTACTCTGACC---CCTCCCCACTTTCCTATAA--------TCCCTCACCTTGTAAATAGTCCCTGTATCACGCTTTTGGCAAATTTATCGGCTGCCCACTGACTATCTGATGC------AATCTGCAATCACAGAACTCATACTA-TTGGGCTAAAGAGTTGATGACACTTGTTCTGTTTTCATGGAGTTTGAGGTACTGGTGC---ACTAC---TTTGCCACATAATCACAAAGTGTATCCCCGTTGTGGGGTAAGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATggttttaaa-acagaattaaaaatgtcaataaaaaacATAgtca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132895789 929 + 135778131 ATGGATTCCATGCTTTGTTTACAAGAGGAGCACATGGAAGCACACAACCCAAGAGCCATAT----TTTCTTCTTACTGCCAAAATCACGCTTCAGATTTGATTTAGGTGTGTGGATATTTGCATCTAGTTCACTTTACTTACT-TTTTTCTACTTTGCTAGGGCAATGTTTTCCAGCAGTAAG------------AAAGAATGAATGAATTCTAGAAAAGGATGAGCACATGA-----CCAGATCAAAGCTTGGAAAGTTTGAATTCATGATC----CATTGTTGGCATCTTCAGGGTCAGGAGGTGAAGCCTCAAGTCCTAAATTCTAGGTCTATGGCTAGgcaggacatcttccttttg--ccttccagatacccactccacccttctccaccctgctgtg-cactctggaggttgacctataggctccacatcaaggcacctccct--tgctttcagactttgagttaagtccaaccaacagggagcaccgcctggaggctgaaggAGGCAGTAAgcaggcttcacctgcct--------gcatct-ctct----------------------------------------------ctgatgttctggtaactactccctcctgttactcctaagggccaagaagtgataattgcacctcact------gtccccatctccaaaatgctactctgacc---cctccccactttcctataa--------tccctcagcttgtaaatagtccctgtatcacgctttTGGCAAATTTATTGGCTGCCCACTGACTATCTGATGCAATAGGAATCTGCAATCACAGAACTCATACTA-TTGGGCTAAAGAGTTGATGACACTTGTTCTGTTTTCATGGAGTTTGAGGTACTGGTGC---ACTAC---TTTGCCAGATAAGCACAAAGTGTATCCCCGTGGTGGGGTAGGGGAAGCAAAACAAATGTTTAACTGTTCAAGGGTATTAATTCAGTCATGGTTTTAAA-ACAGAATTAAAAATGTCAATAAAAAACATAGTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188283844 921 - 190850796 GTGGGTTCCATGCTTTGTTTA-AAGAGGAGCACGTGGAAGTACACAACCCAAGACCCATAT----TTTCCTCCTAGTGCCAGAATCACTATTCAGATATGGTTTAGGTGCGTGGATATTTGCATCTAGTTCACTTTGCTTAGT-TTTTTCCACTTTGCTGGGGCAATGCTTTCCA-CAGTAGG------------ACAGAATGAATGAATTCTAGAAAAGGATGAGCACGCGG-----CCACATCCAAGCTTGGAAAGTCTGAGTTCATGATC----CGTTG-TGGCATCTTCAGAGTCGGGAGGTGGAACTTC--GTCTTAAACTGCAGGTCTGCGGCtgggcaggacatcttcc-tttg--ccttccagatacccactccgcccttctccaccctgctgtg-tgctctggaggttgacctataggccccacatcgatgcatccccct--tgctttccggctctgtgttaagtccagcc-acagggcacactgcctgg-gactgcaggaggcggtgagcaggctgtacctgcct--------gggtct-ctctccct------------------------------------------------ttctggcagcCCCTCCCTCCTGTTACTCCTGTAGGCTGGGGAGTGATCACTGCACCTCACTGTCTCCGTCTCCGTCTCCGAAATGCTGCCCTGACC---CCTCCCCACTTTCCTGTAA--------TCCCTCACCTTATCAGCAGTCCCTACATCACACTTTTGGCAAATTTATCAGCAGCCCACTGACTACCTAATAC------AATCTGCAATCACAAAA--CACACTA-TTTGGCTGAAGAGTCGGCAACATTTGTTCTGTTTTCACGGAGTTTGAGGCACTGAGGCTCTACTGC---TTTGCCAGATAATCAGAAAATGTGTCCTCATTGTGGGATAGGGGAAGCAAAACAAATGTTTAATTGTTCAAGGGTATTAATTCCGTTATGGTTTTAAAGGCAGAATTAAAAATTTCAATAAAATACATAGTCA i calJac3.chr3 C 0 C 0 s mm10.chr8 84761146 912 - 129401213 ATGAGTTCCTCATTGTATCTGAAAGAGCTGAACATG---GTACACAATTCTAGAGCCAGGTACCCTTCCCTATAGCTGCTGAGTTC-CTTTCCAGA-----TTTATGTGTGTAAACACCTCTACCTTGCTTATTTCCCTTACCACTTATCTACATTCATAGAACAGTGTTTTCAAATTATAAG------------GACAAACAGCTGAACTCTGGAAGAGGATTAGCACCTGGTCAGTCCAGGTATCAGACTGAAAAGTTGATGGTCAGCATCAACTAGTTGATGGTGTGTTCAGGGC--AGAGATAAAACTCCAAATCCTAACTTGAAGCTCTCCTCTCACGTAggacatcttcctttt---ctttctgcagaacaaactttaccttctccacctttttctg-tgctttt--ggatcaaccagaggtccctcatcaatctttctctctcctgcccttaggctttgtgcttggtccaaccagtagagggaaccact----------aggaatcagaaagtcgcctgcatatactttgcacacagtatttactctccccaccc----------------------------------cc--ctga-gctgtggtgactgctccctcCTGATAGCCTGATAG---CAGAAATGCTAATTGTACCT-GCT------ATTCTTATCTCCAAAA----ACTCTGCCCTGGTCGTCCCAGTTTCTGAAAAATCACCCCCTCTTCATTTTGTAAACAATCCTTACAC---------------TTTATCATTCACCAACTGTGTATCTGATAC------CATCTCTAATCAGAAAACTCCTGCTATTTTGGCCAAGAAGTAGATGTGATTTGTTATGCATCTGTGAACATTGAGCCGCTGCTGC---AATGC---TTTGCAAGGAAATCAG---------CCCCTCTGTGGGCAAGGGGAAGGACAATATGTACTT-ATTGTGCACGGGTG-CAATTTAGTCGGGGTTCTATAAACTAGGTCAGGGTTTCTCATAGAAATTATAGTCA i mm10.chr8 I 206 C 0 s canFam3.chr16 15765908 895 - 59632846 --------------------------------------------------ATTGGACGTAT----TTTCTTCTTCCTGCCTAAATCACTCTTCAGATGTGATTTAGCTGCTAGAATACTTGTATCTAGTTC-------------ATTTTCTACTTTACTAAAGCAGCGCTTTCCAACGGTAAGGAAAAAAAAAAAAAAGAATGAATGAATTCCAGAAAAGAATTAGTACATGA-----CCAGATGAAAGTTTGGAAAGTTTG-GTTTAACACC----TATTTTTGGCATATTTTGGGTCAGGCATTGAAACTT-AAGTCCTAAATAGTAAGTCTGTTGCtgtgtagtgtaccttctttttgtcccttc-----actca--tcactgttctccaccctgctctg-ggctcttgggattaacctctaggcttcacatcagtgggtctttct--cgttttcaggctatgtgttgg---caacctgtaggga----cactggaag------gaACACAGCAAGCTGACTGCATTTCTTCTAG-----AAAGCT-CTCTCTCTTCATAAGAGAGTGCTCGCTCGTGCTGTCTCTCTTTTGCCCCCCTTtctctcagggttctgcttcttcttgtccctcctaaaggcctaga--tggaaactgtactccacc------attcctgtctccagaatactgct---------tttttacagtttcctataa----acctgccctaaccttataaatagtcctt-tATCATTCTTTTGGAAAATTTCTTGCTTCACCACTGA----CTGATAC------AATCTTCAACCACAAAACTCATCCAA-CTTGGCCAGTCAGTTAATGATATTTGTTATGAATCCATTGACCTTCAGGTATTCATGA---ACTACTTATTTGCAAGACAATCAGAAAATGTGTCCCCATGGTGGGGTTAGGGAATAAAAACAAACATTT-ATTGTTTGAGAGTG-TAATTCAGGCATGGTTTTTAAAGTGAAATTAAGATTTTTGATAAAAACCATAGTTG i canFam3.chr16 C 0 C 0 a score=4095.000000 s hg38.chr4_KI270785v1_alt 96535 1 + 119912 T s panTro4.chr4 190363860 1 + 193495092 T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195337843 1 + 198332218 T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300532 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102101 1 + 184069350 T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440278 1 + 189454096 T i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055021 1 + 178775436 t i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132896718 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188284765 1 - 190850796 T i calJac3.chr3 C 0 C 0 s canFam3.chr16 15766803 1 - 59632846 T i canFam3.chr16 C 0 C 0 e mm10.chr8 84762058 0 - 129401213 C a score=71137.000000 s hg38.chr4_KI270785v1_alt 96536 33 + 119912 ggctgggtgtggtggcttatgcctgtaatccca s panTro4.chr4 190363861 33 + 193495092 ggctgggtgtggtggcttatgcctgtaatccca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195337844 33 + 198332218 ggctgggtgcggtggcttatgcctgtaatccca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300533 33 + 115148730 ggctgggtgcggtggcttatgcctgtaatccca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102102 32 + 184069350 ggctgggtgcagtagcctatgcctggaat-cca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440279 32 + 189454096 ggctgggtgcagtagcttatgcctggaat-cca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055022 32 + 178775436 ggctgggtgtggtagcttatgcctgtaat-cca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132896719 32 + 135778131 ggctgggtgcggtagcttatgcctgtaat-cca i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15766804 22 - 59632846 -----------ATGGCCTCAGGCAGTATTTCCA i canFam3.chr16 C 0 I 132 e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C a score=214162.000000 s hg38.chr4_KI270785v1_alt 96569 86 + 119912 gcactttgggaggctgaggtgggtggatcgcgaggtgaggagatcgagaccatcctggtcaacatggtgaaaccccatctctacta s panTro4.chr4 190363894 86 + 193495092 gcactttgggaggctgaggtgggtggatcgcgaggtgaggagatcgagaccatcctggtcaacatggtgaaaccccatctctacta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195337877 86 + 198332218 gcactttgggaggctgaggtgggtggatcacgaggtgaggagattgagaccattctggtcaacatggtgaaaccccatctctacta i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300566 86 + 115148730 gcactttgggaggctgaggtgggtggatcacgaggtgaggagatcgagaccatcctggtcaacatggtgaaaccctatctctacta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102134 86 + 184069350 gcactttgggaggctgaggtgggcggatcaggaggtgaggagatccagaccatcctggtcaacatggtgaaaccccgtctctacta i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440311 86 + 189454096 gcactttgggaggctgaggtgggcggatcaggaggtgaggagatagagaccatcctggtcaacatggtgaaaccccgtctctacta i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055054 86 + 178775436 gcactgtgggaggctgaggtgggcggatcaggaggtgaggagatcgagaccatcctggtcaacatggtgaaaccccgtctctacta i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132896751 86 + 135778131 gcactttgggaggctgaggtgggcggatcaggaggtgaggagatcgagaccatcttggtcaacatggtgaaaccccatctctacta i chlSab2.chr7 C 0 I 364 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C a score=9697.000000 s hg38.chr4_KI270785v1_alt 96655 25 + 119912 -aaaatacaaaaaAAAAAA-AAATTAg s panTro4.chr4 190363980 23 + 193495092 -aaaatac--acacaaaaa-aaattag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195337963 25 + 198332218 -aaaatacaacaaaaaaaa-aaattag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300652 23 + 115148730 -aaaatac--aaaaaaaaa-aaattag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102220 22 + 184069350 atatatatatatata-----aacccgg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440397 27 + 189454096 atatatatatatatatatataaaccgg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055140 26 + 178775436 atatatatatacatataaa-aacccgg i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I a score=101518.000000 s hg38.chr4_KI270785v1_alt 96680 122 + 119912 ctgggtatggcggcttatgcctgtaatcccagcactttgggaggctcaggtgggtggatcacgaggtcaggagatcgagaccatcctggtcaacatggtgaaaccctatctctactaaaaat s panTro4.chr4 190364003 122 + 193495092 ctgggtgtggtggcttatgactgtaatcccagcactttgggaggctcaggtgggtggatcacgaggtcaggagatcgagaccatcctggtcaacatggtgaaaccctatctctactaaaaat i panTro4.chr4 C 0 C 0 s rheMac3.chr5 181102242 122 + 184069350 ccgggcgcggtggctcacgcctgtaatcccagcactgtgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440424 122 + 189454096 ccgggcgcggtggctcacgcctgtaatcccagcactgtgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaat i macFas5.chr5 C 0 I 165 s papAnu2.chr5 176055166 122 + 178775436 ccgggtgcagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcaccaggtcaggagatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaat i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=1910.000000 s hg38.chr4_KI270785v1_alt 96802 2 + 119912 ac s panTro4.chr4 190364125 2 + 193495092 ac i panTro4.chr4 C 0 C 0 s rheMac3.chr5 181102364 2 + 184069350 ac i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440711 2 + 189454096 ac i macFas5.chr5 I 165 C 0 s papAnu2.chr5 176055288 2 + 178775436 ac i papAnu2.chr5 C 0 I 169 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=-295.000000 s hg38.chr4_KI270785v1_alt 96804 6 + 119912 aa-----aaaa-- s panTro4.chr4 190364127 11 + 193495092 aaaaaataaaa-- i panTro4.chr4 C 0 C 0 s rheMac3.chr5 181102366 6 + 184069350 -------aaaaaa i rheMac3.chr5 C 0 I 171 s macFas5.chr5 186440713 6 + 189454096 -------aaaaca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055459 6 + 178775436 -------aaaaga i papAnu2.chr5 I 169 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=996.000000 s hg38.chr4_KI270785v1_alt 96810 3 + 119912 aaa s panTro4.chr4 190364138 3 + 193495092 ata i panTro4.chr4 C 0 C 0 s macFas5.chr5 186440719 3 + 189454096 aaa i macFas5.chr5 C 0 I 4 s papAnu2.chr5 176055465 3 + 178775436 aaa i papAnu2.chr5 C 0 I 14 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I e rheMac3.chr5 181102372 171 + 184069350 I e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=910.000000 s hg38.chr4_KI270785v1_alt 96813 1 + 119912 a s panTro4.chr4 190364141 1 + 193495092 a i panTro4.chr4 C 0 C 0 s rheMac3.chr5 181102543 1 + 184069350 a i rheMac3.chr5 I 171 C 0 s macFas5.chr5 186440726 1 + 189454096 a i macFas5.chr5 I 4 C 0 s papAnu2.chr5 176055482 1 + 178775436 a i papAnu2.chr5 I 14 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e chlSab2.chr7 132896837 364 + 135778131 I e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=10654.000000 s hg38.chr4_KI270785v1_alt 96814 9 + 119912 aaaaattac s panTro4.chr4 190364142 9 + 193495092 aaaaattac i panTro4.chr4 C 0 C 0 s rheMac3.chr5 181102544 9 + 184069350 aaaaattaa i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440727 9 + 189454096 aaaaattaa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055483 9 + 178775436 aaaaattaa i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897201 9 + 135778131 aaaaattaa i chlSab2.chr7 I 364 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C e nomLeu3.chr7b 111300675 0 + 115148730 C e ponAbe2.chr4 195337988 0 + 198332218 C a score=114995.000000 s hg38.chr4_KI270785v1_alt 96823 51 + 119912 ctgggtgtggtggcttacgcctgtaatcccagctactctggaggctgaggc s panTro4.chr4 190364151 51 + 193495092 ctgggtgtggtggcttacgcctgtaatcccagctactctggaggctgagac i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195337988 51 + 198332218 ctgggtgtggtggcttatgcctgtaatcccagctaccctggaggctgaggc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300675 51 + 115148730 ctgggtgtggtggtgcatgtctgtagtcccagctactctggaggctgaggc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102553 50 + 184069350 ctgggtgtggtggc-ggcgcctgtaatcccagctactccagaggctgaggc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440736 51 + 189454096 ctgggtgtggtggcgggcgcctgtaatcccagctactccagaggctgaggc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055492 51 + 178775436 ctgggtgtggtggcgcatgcctgtaatcccagctactccagaggctgaggc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897210 51 + 135778131 ctgggtgtggtggtgcgtgcctgtaatcccagctactccagaggctgaggc i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15766826 132 - 59632846 I e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C a score=221596.000000 s hg38.chr4_KI270785v1_alt 96874 119 + 119912 aggacaattgcttgaacctgggaggcagaggttgcagtgagcagagattgcaccactgcactccagcctggtgacagagctagactatgtct-----caa------aacaacaacaacaacaaa--CATGAT s panTro4.chr4 190364202 119 + 193495092 aggacaattgcttgaacctgggaggcagaggttgcagtgagcagagattgcaccactgcactccagcctggtgacagagctagactatgtct-----caa------aacaacaacaacaacaaa--CATGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338039 125 + 198332218 aggacaattgcttgaacctgggaggcaggggttgcagtgagcagagattttaccactgcactccagcatggtgacagagctagactctgtct-----caaaacaacaacaacaacaacaacaaA--CATGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300726 125 + 115148730 aggacaattgcttgaacctgggaggcagaggttgcagtgagcagagattgcactactgtactccagcctggtgacagagctagactgtgtct-----caagacaacaaaaacaacaacaacaaa--CATGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102603 124 + 184069350 aggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctggtgacagagcgagactccgtctcaaaacaa------aacaa-aacaa-aacaaaCCCATGAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440787 124 + 189454096 aggagaattgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctggtgacagagcgagactccgtctcaaaacaa------aacaa-aacaa-aacaaaCCCATGAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055543 119 + 178775436 aggagaattgcttgaacctgggaggcagaggttgcagtgagccgagattgcaccactgcactccagcctggtgacagagtgagactccgtct-----caa------aacaa-aacaa-aacaaacccatgaT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897261 109 + 135778131 aggagaattgcttgaacctgggaagcagaggttgcagtgagccgagattgca----------ccagcctggtgacagagcgagactccgtct-----caa------aacaa-aacaa-aacaaaCCCATGAT i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15766958 53 - 59632846 aggatcactacctgagcc--aaaggcagatgct-ca---------------accactaag--ccacccaggtg----------------------------------------------------------- i canFam3.chr16 I 132 C 0 e mm10.chr8 84762058 0 - 129401213 C e calJac3.chr3 188284766 0 - 190850796 C a score=16640.000000 s hg38.chr4_KI270785v1_alt 96993 6 + 119912 CATATG s panTro4.chr4 190364321 6 + 193495092 CATATG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338164 6 + 198332218 CATATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300851 6 + 115148730 CATGTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102727 6 + 184069350 CATATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440911 6 + 189454096 CATATG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055662 6 + 178775436 CATATG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897370 6 + 135778131 CACATG i chlSab2.chr7 C 0 C 0 s mm10.chr8 84762058 6 - 129401213 CATAAG i mm10.chr8 C 0 C 0 e canFam3.chr16 15767011 0 - 59632846 C e calJac3.chr3 188284766 0 - 190850796 C a score=1279079.000000 s hg38.chr4_KI270785v1_alt 96999 362 + 119912 GTTTCACATACTATTTATTTACAATTCCAAAA-CATCATAAATACATCCTATATTTCATGGTTCAGTGGAGTTCAGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAGCTG--GGATAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAGATGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGGAACACGCAAAGTCATTCTACACAACATGATGATGGAGCCATTCTTCATTTTTTCACTGGTCTGGAAAAGACTTTGAGAAATAGGGCTAC-ACTTAAGCATCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-GAGAACCTTGAAAATATTAG s panTro4.chr4 190364327 362 + 193495092 GTTTCACATACTATTTATTTACAATTCCAAAA-CATCATAAATACATCCTATATTTCATGGTTCAGTGGAGTTCAGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAGCTG--GGATAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCAAAATGCAAATGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGGAACACGCAAAGTCATTCTACACAACATGATGATGGAGCCATTCTTCATTTATTCACTGGTCTGGAAAAGACTTTGAGAAATAGGGCTAC-ACTTAAGCATCTTAGACATATTTCTAGAATTTTGGAATTTGCT-GAAAACCTTGAAAATATTAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338170 366 + 198332218 GTTTCACATACTATTTATTTACAATTCCAAAA-CATCATAAATACATCCTGTATTTCATGGTTCAGTGGAGCTCAGGAAAAGGAAGTATTTGTCTGAGAAAGCAACTTGAATCAAAGAAGCTG--GGGTTGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAAATGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGGAACACGCAAAGTCATTCTACACAACATGATGATGGAGCCATTCTTCATTTATTCACTGGTCTGGAAAAGACTTTGAGAAATAGGGCTAC-ACTTAAGCATCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-AAAAACCTAGAAAATATTAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111300857 366 + 115148730 GTTTCACATACTATTTATTTACAATTCCAAAAGCATCATAAATACATCCTATATTTCATGGTTCAGTGGAGTTCAGGAAAAGCAAGTATTTGTCTGAGAAAGCAACTTGAATCAAAGAAGCTGGTGGGTAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAAATGCTTTCCATGCACCTGTACT-ACGGAACTGTGGTGTGGAGATATGGAATATGCAAAGTCATTCTACACAACGCGATGATGGGGCCATTCTTCATTTATTCACTCATCTGG--AAGACTTTGAGAAATAGGGCTAC-ACTTAAGCATCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-AAAAACCTAG-AAATATTAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181102733 363 + 184069350 GTTTCACATACTATTTATTTGCAATTCCAAACATATCATAAAGACATCCTATATTTCATGGTTCAGTGGAGTTCCGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAGCTG--GGGTAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAAACGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGCAACATGCAAAGTCGTTCTGCACAATGTGATGATGGGGCCATTCTTCATTTTTTCACTGGTCTGGAAAAGACTTTGAGAAATAGGACTAC-ACTTAAGCACCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-AAAAACCTAGAAAATATTAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186440917 363 + 189454096 GTTTCACATACTATTTATTTGCAATTCCAAACATATCATAAAGACATCCTATATTTCATGGTTCAGTGGAGTTCAGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAGCTG--GGGTAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATACAAACGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGCAACATGCAAAGTCGTTCTACACAATGTGATGATGGGGCCATTCTTCATTTTTTCACTGGTCTGGAAAAGACTTTGAGAAATAGGACTAC-ACTTAAGCACCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-AAAAACCTAGAAAATATTAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176055668 364 + 178775436 GTTTCACATACTATTTATTTGCAATTCCAAACATATCATAAAGACATCCTATATTTCATGGTTCAGTGGAGTTCAGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAGCCG--GGGTAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAAACGCTTTCCATGCACCTGTACT-ATAGAATTGTGGTATGGAGATATGGAACATGCAAAGTCGTTCTACACAACGTGATGATGGGGCcattcttcatttattcactggTCTGGAAAAGACTTTGAGAAATAGGACTACAACTTAAGCACCTTAGACATATTTCTAGAATTTTGGAGTTTGct-aaaaacctagaaaatattAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897376 363 + 135778131 GTTTCACATACTATTTATTTGCAATTCCAAACATATCATAAAGACATCCTATATTTCATGGTTCAGTGGAGTTCCGGAAAAGCAAGTATT----TGAGAAAGCAACTTGAATCAAAGAAACTG--GGGTAGTTCTGAAGAAAGGGAAATT-AACATC----TCCCCCAAATGCAAACGCTTTCCATGCACCTGTTCT-ATAGAATTGTGGTATGGAGATATGGAACATGCAAAGTCGTTCTACACAACGTGATGATGGGGCCATTCTTCATTTATTCACTGGTCTGGAAAAGACTTTGAGAACTAGGACTAC-ACTTAAGCACCTTAGACATATTTCTAGAATTTTGGAGTTTGCT-AAAAACCTAGAAAATATTAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188284766 364 - 190850796 GTTTCACATATTATTTCTTTACAATTCCAAAACCATTGTAAACACATCCTATATTCCATGGTTCAATTGAGTTCTGGAAAAGCAAGTATT----TGAGAAAACAACTTGAATCAAAGAAGCTGGTGGGTAGTTCTGAGGAAAGGAAAGTT-AATATC----TCCCCCAAATGCAAATGTGTTCCATGCAGCTGTACC-GTATAATTGTGATATGGAGATGCGGGACACACAGAGTCA-TCTAGACAGTGTGATGAGGAGGCCGGTCTTCGTTTATTCACCAGCCCGGAAAAGGCTTTGAGGAATAGGGCTAC-ACTGAAGCGTCGTAGACGTAGTTCTAGAATTTTGGAGTTTGCT-AAAAAGCTGGAAGATATTAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84762064 337 - 129401213 GTTGGGCATACTGTTTAGTAACAATTTTTAAAATGCCTCGATTATATTCTGTATTTCATGGCTCAGTTGAGTCCAGGAAAGACCAGTATTTGTAAGAGAAAACAGGT--GACTCAAGGAGCTAGCAGATTACTCTGAAGAAAGGGAAATTAAATATC----TCCCCCAAAAGTAAATATTTTTA--GTATGTGTAATGATGTAATTGTGAAATAGATACACAAAACAT--AGGATAATACTGCAGAAATTTATCATGGAA-GAGTATTCAT---------------------------AGAAAGTAAGATAT-AGTTAAACATCTTAGACATATTTGCAGAGTTCTGAAATCTTGT-AACAACTTGGAAAATAATAG i mm10.chr8 C 0 I 1179 s canFam3.chr16 15767011 353 - 59632846 ----------ccccTTATTTCCAATTTTAAAAGCACTTTGAATACACTC-ATATTTCATAATTCAGGTGAATTCAGGAAAAGCAAATACTTGTATGAGAAAACGACTCAAATCAAAGAAGCTA-TTGGTAGTTGTGAAGAAAGGGAAATT-AGCCTCTCTATCTCTCAAATATAAACATCTGCAATCCATCTGCACT-ATACAGTTTTGATCTGAATACGTGG-----TCAAAGCAATTCTACACAAAATGATTATGGGGATATTCTTCATTTATCCATTAGTCTGGAAAAGACTTTGGAAAGTAGGAC-GC-CCTTGAGCATTCCAGACACACTTAGAGAATTCTGGAGTTTGCTAAAAAACCTAGAAAATAG--- i canFam3.chr16 C 0 C 0 a score=130779.000000 s hg38.chr4_KI270785v1_alt 97361 39 + 119912 GCACTGGACTGGTTTGACCTGCCGTGACGTACAAGGCAC s panTro4.chr4 190364689 39 + 193495092 GCACTGGATTGGTTTGACCTGCCGTGACGTACAAGGCAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338536 39 + 198332218 GCACTGGATTGGTTTGACCTGCCGTGACGTACAAGGCAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111301223 39 + 115148730 GCACCGGATTGGTTTGACTTGCTGTGACGTACAAGGCAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181103096 39 + 184069350 GCACCGGATTGGTTTGACTTGCGGTGACATACAAGGCAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186441280 39 + 189454096 GCACCGGATTGGTTTGACTTGCGGTGACATACAAGGCAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176056032 39 + 178775436 GCACCGGATTGGTTTGACTTGCGGTGACATACAAGGCAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897739 39 + 135778131 GCACTGGATTGGTTTGACTTGCGGTGACATACAAGGCAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188285130 39 - 190850796 GCACTGGATTGGTTTGACTTGCTGTGACAGACAAGGCAA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15767364 39 - 59632846 ACACTCTGCTGGTCTGATGTGATATTACATACAAGGCAA i canFam3.chr16 C 0 C 0 e mm10.chr8 84762401 1179 - 129401213 I a score=1356457.000000 s hg38.chr4_KI270785v1_alt 97400 394 + 119912 TTAGGTT---TGTTATGTTTGATACAAGAAAGCCTTTA-TGAGACTGTTCAACAGAAAATCTTGAATTTTTTACTG-ATACCCATTAAATTGCATAAGAC--AAATACAGACTGACAAACACATAGCACATATATGATATT----TCTTTTTTTG----------AATATAATGGAGGAAAACACTGTTTTTAGTCTAGTTATCATTAGACT---TTTGTTACAGAAAATAAAC----AAATTCACCCAG--CTCTTTGTGCATTTATGGCACTGTTGCTTCTCAGACACCAAATGAAAATTTAACATCCTGTGCCCTCCTTTTTAGATTAAATTCTCCTGTGTTTTCTT-TTGGAAATGGGATGGAAGTGAAAACAAAATGTT---GTTCTACCATATATCAAGATGAGGGCTGATATTC-TGTCCAG------------ s panTro4.chr4 190364728 395 + 193495092 TTAGGTT---TGTTATGTTTGATACAAGAAAGGCTTTA-TGAGACTGTTCAACAGAAAATCTTGAATTTTTTACTGAATACCCATTAAATTGCATAAGAC--AAATACAGATTGACAAACACATAGCACATATATGATATT----TCTTTTTTTG----------AATATAATGGAGGAAAACATCGTTTTTAGTCTAGTTATCATTAGACT---TTTGTTACAGAAAATAAAC----AAATTCACCCAG--CTCTTTGTGCATTTATGGCACTGTTGCTTCTCAGACACCAAATGAAAATTTAACGTCCTGTGTCCTCCTTTTTAGATTAAATTCTCATGTGTTTTCTT-TTGGAAATGGGATGGAAGTGAAAACAAAATGTT---GTTCTACCATATATCAAGATGAGGGCTGATATTC-TGTCCAG------------ i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338575 405 + 198332218 TTAGGTT---TGTTATGTTTGATACAAGAAAGGCTTTA-TGAGACTGTTCAACAGAAAATCTTGAATTTTTTAGTGAATACCCATTAAATTGCATAAGAC--AAATACAGATTGACAAACACATAGCACATATATGATATT----TCTTTTTTTGATTTTTTTTTAATATAATGGAGGAAAACATGGTTTTTAGTCTAGTTATCATTAGACT---TTTGTTATAGAAAATAAAC----AAATTCACCCAG--CTCTTTGTGCATTTATGGCACTGTTGCTTCTCAGACACCAAATGAAAATTTAACTTCCTGTGTCCTCCTTTTAAGATTAAATTCAGCTGTGTTTTCTT-TTGGAAATGGGATGGAAGTGAAAACAAAATGTT---GTTCTACCATATATCAAGATGAGGCCTGATATTC-TGTCCAG------------ i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111301262 395 + 115148730 TTAGGTT---TGTTATGTTTGATACAAGAAAGGCTTTA-TGAGACTGTTCAACAGAAAATCTTGAATTTTTTACTGAATACCCATTAAGTTGCATAAGAC--AAATACAGATTGACAAACACAAAGCACATATGTGATATT----TATTTTTCTG----------AATATAATGGAAGAAAACATGGTTTTTAGTCTAGTTATCATGAGACT---TTTGTTACAGAAAATAAAC----AAATTCACCCAG--CTCTTTGTGCATTTATGGCACTGTTGCTTCTCAGACACCAAATGAAAATTTAACTTCCTGTGTCCTTCTTTTTAGATTAAATTCAGCTGTGTTTTCTT-TTGGAAATGGGATGGAAGTGAAAACAAAATGTT---GTTCCACCATATATCAAGATGAGGGCTGATAGTC-TGTCCAG------------ i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181103135 395 + 184069350 TTAGGCT---TGTTAGGTTTGATACAAAAAAGGCTTTA-TGAGACTGTTCAACAGAAAATTTTGAATTTTTAACTGCATACCCATTAAATTGCATAACGT--AAATACAGATTGACAAACACGTATCACATCTATGACATT----TCTTTTTTTG----------AATATAATGGAGGAAAACATGGTTTTTAGTCTAGTTATCATTAGACT---TTTGTTATAGAAAATAAAC----AAATTCACTCAA--CTCTCTGTGCATTCATGGCACTGCTGCTTCTCAGGCACCAAATGAAAATTTAACTTCCCGTGTCCTCCTTTTTAGATTAAATTCAGCTGTGTTTTCTT-TTGAAAATGGAATGGAAGTGAAAACAGAATGTT---GTTCTACCATATATCAAGATGAGGACTGATATTC-TGTCCAG------------ i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186441319 395 + 189454096 TTAGGCT---TGTTAGGTTTGATACAAAAAAGGCTTTA-TGAGACTGTTCAACAGAAAATTTTGGATTTTTAACTGCATACCCATTAAATTGCATAACGT--AAATACAGATTGACAAACACGTATCACATCTATGACATT----TCTTTTTTTG----------AATATAATGGAGGAAAACATGGTTTTTAGTCTAGTTATCATTAGACT---TTTGTTATAGAAAATAAAC----AAATTCACTCAA--CTCTCTGTGCATTCATGGCACTGCTGCTTCTCAGGCACCAAATGAAAATTTAACTTCCCGTGTCCTCCTTTTTAGATTAAATTCAGCTGTGTTTTCTT-TTGAAAATGGAATGGAAGTGAAAACAGAATGTT---GTTCTACCATATATCAAGATGAGGACTGATATTC-TGTCCAG------------ i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176056071 395 + 178775436 TTAGGCT---TGTTAGGTTTGATACAAAAAAGGCTTTA-TGAAACTGTTCAACAGAAAATTTTGAATTTCTAACTGCATACCCATTAAATTGCATAACGT--AAATACAGATTGACAAACACATATCACATctatgacatt----tctttttttg----------aatataATGGAGGAAAACATGGTTTTTAGTCTAGTTATCATTAGACT---TTTgttatagaaaataaac----aaattcactCAA--CTCTCTGTGCATTCCTGGCACTGCTGCTTCTCAGGcaccaaatgaaaatttaactTTCCGTGTCCTCCTTTTTAGATTAAATTcagctgtgttttctt-ttgaaaatggaaTGGAAGTGAAAGCAGAATGTT---GTTCTACCATATATCAAGATGAGGACTGATATTC-TGTCCAG------------ i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132897778 395 + 135778131 TTAGGCT---TGTTAGGTTTGATACAAAAAAGGCTTTA-TGAGACTGTTCAACAGAAAATTTTGAATTTTTAACTGCATACCCATTAAATTGCATAACGT--AAATACAGATTGACAAACACATATCACATCTATGACATT----TCTTTTTTTG----------AATATAATGGAGGAAAACATGGTTTTTAGTCTAGTTATCGTTAGACT---TTTGTTAGAGAAAATAAAC----AAATTCACTCAA--CTCTCTGTGCATTCATGGCACTGCTGCTTCTCAGGCACCAAATGAAAATTTAACTTCCCGTGTCCTCCTTTTTAGATTAAATTCAGCTGTGTTTTCTT-TTGAAAATGGAATGGAAGTGAAAACAGAATGTT---GTTCTACCATATATCAAGATGAGGGCTGATATTC-TGTCCAG------------ i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188285169 399 - 190850796 TTAGGTT---TGTTATGTTTGATACAAGAAAGGTTTTA-TGAGATTGTTCAACAGGAAATCTTGAATTTTTTACTGAATACCCATTAAATTGCCTAAGAC--AAATACCGATTGCCAAACACATATCACATATATAATATT----TCTTCTTTTG----------AATATAATGGAGGAGAACATGGTTTTTAGTCTTGTTATCGTTAGACT---TTCGTCATAGAAAATAACCGATAAAGTTCACCCAGGTCTCTCTATGCATTGATGGCCCTGCTGCTTCTCAGACACCAGATGGAAGTTCAACTTCCTGTGTCCTCCTTTT-ACATTAAATTCAGCTGCGCTTCCTT-TTGAACATGGAAT-GAAGCGAAAACAAAATGTT---GCTCTACCATTTATCAAGAGCAGGGCTGATGCTC-CGTCTGG------------ i calJac3.chr3 C 0 C 0 s mm10.chr8 84763580 376 - 129401213 TTAGGTTGTATGTTTGGTTCGCTACATGAAAGTCTTTT-TGAGACTTCTAAG---------TCAAACAATTCACTA-ATAACTATTGA--TGATAAGAAC--AGATAAAGACTGA-AGATATGTGTCATAT-----ACATT----CCTTCTTTTG----------AATCAAATGAATGAGAACATGGCTCCTAGTCTAGTTATCCTTATACTTTGTTGGTTACCGATAAAAAGC----AAATACACTCAT--CTGTCTCCATACCTACAGCAATATCGCTTCTTAGTCAGCAAATGAGAGCATACCTTTTCCTGTTGTCCTTTTTGTATCAATTTCATGTGCATTTTATT-TTGAAGGT---------ATACAAAGAAAATGTT--CCTTCTGCTATGCATCAACATGGGGACTGATATTCTTGTCTAG------------ i mm10.chr8 I 1179 I 102 s canFam3.chr16 15767403 388 - 59632846 TTAGGTT---TGTTATGTTTGATACAAGGAAGGTTTTTCTGACACTACTCAACCAAAAATCTTG-ACTTTTCACCGGATGCCCGTTTAATTCTGTAACACTGAAATATAGATTTAC--ATGAGTATCACATATATAACGTTTATGTCTTATTTTG----------A---------AGGGGAACATACTTTTTTGCTTAGGTTTCACACTATT---TTCATTGAAGAAAAA--------AAATTCACAAAG--CTCTCTG----TTCGTAGAACTATTGCTTCTCAG----CAAATGCAAATCTACCTTCTTATGGCCTCCTT----AAGGGACTTCAGCTGCGCTCTCCTATTGAAAATGGGACTGTCATGGAAACAAAATATTTTTCTTCTACCATATATCAAAATGAGGGCTGATGT---TGTCTGGAGCTAAAGCTAG i canFam3.chr16 C 0 C 0 a score=342707.000000 s hg38.chr4_KI270785v1_alt 97794 116 + 119912 AGCTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTTGAAATTTTCT---TTCTG-------------TGGGATGGAGGCAG---------AGATCTTGACGATGCTCGCTCTCTG s panTro4.chr4 190365123 116 + 193495092 AGCTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCTAAATTTTCT---TTCTG-------------TGGGATGGAGGCAG---------AGATCTTGACGATGCTCGCTCTCTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195338980 116 + 198332218 AGCTTAAGTAAGTAGAATTGATTCGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCAAAATTTTCT---TTCTG-------------TGGGATGGAGGCAG---------AGATCTTGATGATGCTTGCTCTCTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111301657 116 + 115148730 AGTTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGGTTGCAACTTTACACATTTTTGAAATTTTCT---TTCTG-------------TGAGATGGAGGCAG---------AGATCTAGACTATGCTTGCTCTCTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181103530 129 + 184069350 AGTTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCGAAATCTTCT---TTCTAAATGGATGGAAATGGGGATGGAGGCAG---------AGATCTTGACGATACTCGCTGTCTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186441714 129 + 189454096 AGTTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCGAAATCTTCT---TTCTAAATGGATGGAAATGGGGATGGAGGCAG---------AGATCTCGACGATACTCGCTGTCTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176056466 129 + 178775436 AGTTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCGAAATCTTCT---TTCTAAATGGATGGAAAtggggatggaggcag---------agatCTGGACGATACTCACTGTCTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132898173 129 + 135778131 AGTTTAAGTAAGTAGAATTGATTTGCTGAAATGCTGAAATGCTTGCAACTTTACACATTTTCGAAATCTTCT---TTCTAAATGGATGGAAATGGGGATGGAGGCAG---------AGATCTTGACGATACTCGCTGTCTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188285568 111 - 190850796 AGCTTAAGTGAGTAGAACTGATCTGCTGAAATGC--------TTGTAACTTTACACATTTTCACAATTTCCTTTCTTCTG-------------TGGGATGGAGGCAG---------AGATCTTGATGATGCTCGCTGTCTG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15767791 120 - 59632846 AGCCAGAGTAAGTGGTAATGATTT-------CTCTCTGGTGTCCGGAACTCTACACATTCTT-AAGTTTTCTTTCTCCTG-------------TGGCATAGAAACAGCAAACAAGTATATCTTGTCAATGCCTATCTTCGG i canFam3.chr16 C 0 C 0 e mm10.chr8 84763956 102 - 129401213 I a score=1493467.000000 s hg38.chr4_KI270785v1_alt 97910 466 + 119912 GGGCTTCTG-TG----------------TATCACCGGGTGAAAATGGTCTTTCCTTATCTGGAAT-TCCCCTTCCCTTCCCACCATTATGTAACCAGCTCCAGCATCTCC-ACATGGCAAACCCTTCTCAATGCCCCTGCACACAGAATTTGTCCTTTACTCCTTGGTCTCTGCATGTGCCCCGTGCTTCTGCTGTGGCATGTGCCACACTGTGCTTTTTAAC----ATGTCCGTCTTGATGATATGC---------TCTAGATTCATCTGTGGGACTGAACCTTGTCTTTGATCACTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACAGTGTTGAACTATTCATCTCTATTCTAATTCTCA--TTTATTTGTGGAGAGAATAGAACGGGATAACTTATTCTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTCTCTTGTAAAATGTGAGTTTGAGGGAAGAAACGGTGTGCAACT-----TGTATGTGATGAT s panTro4.chr4 190365239 464 + 193495092 GGGCTTCTG-TG----------------TATCACTGGGTG--AACGGTCTTTCCTCATCTGGAAT-TCCCCTTCCCTTCCCACCATTATGTAACCAGCTCCAGCATCTCC-ACATGGCAAACCCTTCTCAATGCCCCTGCACACAGAATTTGTCCTTTACTCCTTGGTCTCTGCATGTGCCCCGTGCTTCTGCTGTGGCATGTGCCACACTGTGCTTTTTAAC----ATGTCCGTCTTGATGATATGC---------TCTAGATTCATCTGTGGGACTGAACCTTGTCTTTGATCACTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACAGTGTTGAACTATTCATCTCTATTCTAATTCTCA--TTTATTTGTGGAGAGAATAGAACGGGATAACTTATTCTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTCTCTTGTAAAATGTGAGTTTGAGGGAAGAAACGGTGTGCAACT-----TGCATGTGATGAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195339096 466 + 198332218 GGGCTTCTG-TG----------------TATCACCAGGTGAAAACGGTCTTTCCTCATCTGGAAT-TCCCCTTCCCTTCCCACCATTATGTAACCAGCCCCAGCATCTCC-ACATGGCAAACCCTTCTCAATGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGGTCTCTGTATGTGCCCCGTGCTTCTGCTGTGGCATGTGCCACATTGTGCTTTTTAAC----ATGTCCGTCTTGATGATATGC---------TCTAGATTCATCTGCGGGACTGAACCTTGTCTTTGATCACTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACGGTGTTGAACTATTCATCTCTATTCTAATTCTCA--TTTATTTGTGGAGAGAATAGAACGGAATAACTTTTTCTGTGGTTGTGAAAACCTGAGAATTCATCTGGAATCGAGTTCTCTTGTAAAATGTGAGTTTGAGGGAAGAAACGGTGTGCAACT-----TGTATGTGATGAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111301773 466 + 115148730 GGGCTTCTG-TG----------------TATCACCGGGTGAAAATGGTCTTTCCTCATCTGGAAT-TCCCCTTCCCTTCCCACCATTATGTAACCAGCCCCAGCATCTCC-ACATGGCAAACCCTTCTCAATGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGGTCTCTGTGTGTGCCCCATGCTTCTGCTGTGGCCTGTGCCACACTGTACTTTGTAAC----ATGTCCATCTTGATAATGTGC---------TCTAGGTTCATCTGCGGGACTGAACCTTGTCTTTGATCATTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACAATGTTGAACTATTCGTCTCTATTCTAATTCTCA--TTCCTTTGTGGAGAGAATAGAACGGAATAACTTTTTCTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTCTCTTGTAAAATGTGAGTTTGAGGGAAGAAACGGTGTGCAGCT-----TGTATGTGATGAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181103659 461 + 184069350 GGGCTTCTA-TG----------------TATCACTGTATGAAAATAGTCTTTCCTCATCTGGAAT-TCCCCTACACTTCCCACCATTATGTAACCAGCTCCAG-----GC-ACATGGCAAACCCTTCTCAAGGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGCCCCCTGTATGTGCCCGGTGCTTCTGCTGTGGCATGTGCCACACAGTATTTTTTAAT----ATGCCCATCTTGGTAATTTTC---------TCTAGATTCATCTGTGGGACTGAACCTTGTCTTTGATCGTTAGCGTACCTTGTGGAAACTAATTTGCAGGCAACAGTGTTGCACTATTTATCTCTATTCTAATTCTCA--TTTTTTTGTGGAGAGAATAGAACGGAATAACTTTTACTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTGTCTTGTAAAATGTGAGTTTGAGGGAAGAAACAGTGTGCAACT-----TGTTTGTGATTAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186441843 461 + 189454096 GGGCTTCTA-TG----------------TATCACTGTATGAAAATAGTCTTTCCTCATCTGGAAT-TCCCCTACACTTCCCACCATTATGCAACCAGCTCCAG-----GC-ACATGGCAAACCCTTCTCAAGGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGCCCCCTGTATGTGCCCGGTGCTTCTGCTGTGGCATGTGCCACACTGTATTTTTTAAT----ATGCCCATCTTGGTAATTTTC---------TCTAGATTCATCTGTGGGACTGAACCTTGTCTTTGATCGTTAGCGTACCTTGTGGAAACTAATTTGCAGGCAACAGTGTTGCACTATTTATCTCTATTCTAATTCTCA--TTTTTTTGTGGAGAGAATAGAACGGAATAACTTTTACTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTGTCTTGTAAAATGTGAGTTTGAGGGAAGAAACAGTGTGCAACT-----TGTTTGTGATTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176056595 466 + 178775436 GGGCTTCTG-TG----------------TATCCCCGTGTGAAAATAGTCTTTCCTCATCTGGAAT-TCCCCTACACTTCCCACCATTATGAAACCAGCTCCAGCATCTCC-ACATGGCAAACCCTTCTCAAGGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGCCCTCTGTATGTGCCCGGTGCTTCTGCTGTGGCATGTGCCAcactgtgctttttaaa----atgccCATCTTGGTCATGTTC---------TCTAGATTCATCTGTGGGACTGAACCTTGTCTTTGATCGTTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACAGTGTTGCACACTTTATCTCTAttctaattctca--tttttttgtggagagaaTAGAACGGAATAACTTTTACTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTGTCTTGTAGAATGTGAGTTTGAGGGAAGAAACAGTGTGCAACT-----TGTTTGTGATTAT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132898302 461 + 135778131 GGGCTTCTG-TG----------------TATCACTGTGTGAAAATAGTCTTTCCTCAACTGGAAT-TCCCCTTCACTTCCCACCATTATGTAACCAGCTCCAGCATCTCC-ACATGGCAAACCCTTCTCAAGGCCCCTGCACACAGAATTTGTCCTTTGCTCCTTGCCCTCTGTATGTGCCCGGTGCTTCTGCTGTGGCATGTGCCACACTGTGTTTTTTAAT----ATGTCCATCTTGGTAATGTTC---------TCTAGATTCATCTATGGGACTGAACCTTGTCTTTGATCGTTAGCGCACCTTGTGGAAACTAATTTGCAGGCAACAG---TGCACTATTAATTTCTATTCTAATTCTCATTTTTTTTTGTGGAGAGAATAGAACAGAATAACTTTTACTGTGGTTGTGAAAACCTGAGAATTCAACTGGAATCGAGTTGTCTTGTAAAATGTGAGTTTGAGGGAAGAAACAGTGTGCAAC---------TTGTGATTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188285679 439 - 190850796 GGGCTTCTA-TG----------------TATCACTATGTGAAAATGGTCTTTCCTCATCTGGAAT-TCCCCTACTTTTCCCA-CATTATGTAACCAGCTCCAGCATCTCC-ACGTGGCAAACCCTTCTCAACGCCCCTGCACACAGAATGTGTCCTTTGCGCCTTGGCCTCTGTGTGTGCCACACACTTCTGCTGTGGTGTGCATCACACTGTGCTTTTTAAT----GTGTCCATTTTGATGCTGTCC---------TCTAGATTCATTTGTGGGGCTGGACCTTGTCTTTGATCATTAGCACACCTTGTAGACTCTAATTTGCAGGCAACAGTGTTGAACTATTCAATGCTATTCTGATTCTCA--TTTATTTGTGGAGAGAATAGAGTG--------------------------ATCTGTTCCTTCAACTGGAATAGAGTTCTCTTATAAAGCATGACTTTAAGGAAGGAAGCGGTGTGCAACT-----TGTTTGTGATTTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84764058 408 - 129401213 GGGCTTCTTCTG----------------CTCCAGTATATAGAAATTCTCTTCCATAGCGTGGAATCTCCAATATCCTTCCC--CATCATCTAAGCAGCTCCAGCATCTCTGACGTGGGTGA-----CTTGATGTTCTTGCCCACAGAATTTA-CCATTGTGCCGTTGACACTATATG----------------TGGGACACACATCACAATG--------------------CAGCTTGATATTATCCAGTTCCTGTTCTAACTTCATTAATGGGACTAGACCTTGTCTTTCATCATTAACAGCTTCCTTGGAAACTAACTAGCAGCCAATAGTGTTGACCTATTCAATATTATTTAGATGTTCA--TTTGCTCAAGAAGGGAACTCTATGAATAAGCTT--------------------TGAGTGTCCACATG--------------TGTACA-TGTGTATTTGTGAGGGGAGGATGtatgtgtctgcacatgcatgtggaagt i mm10.chr8 I 102 I 416 s canFam3.chr16 15767911 478 - 59632846 GAAGTACTA-TACCCAGACCCGCCACCTTGCTGTCCTACGACACTACTCTTCCCTTGCCTGGAAT-TCCCCATCCCCTTCTACCCCTGCACAACCAGCTCTGGTGTCTCA-ATCTGGCAAACCCAGCCTAATGTCCCTGCACACAGAATTTTCCATTTGCTGCTTTGCCTCTGTGTGTGCTGCGTATTCCTACCATGGCATGCAGCATACTGCATTTTTTTTTTTTAATGTCTGTTTTTGGACCATAC---------TGTG---TTATTTGTGGGACTGACCCTTATCTTTGATGAACAGCAAACGCCATAGAAAGTCAGTAGTAGGCATGAATGCTAAGTTATTCAACACTATTCTGCTTCTCA--TTTATTCACAGAGAAAATAGAATAAAATAACTTTTACTGGGTCTGTGAGAACCAGC-AATTTAACTTGAATATAGTTCTTTTCTATAGTGGAAGCTAAGGGAGAGAAACTATGT----CT-----TGTTTGTGATTGT i canFam3.chr16 C 0 C 0 a score=87352.000000 s hg38.chr4_KI270785v1_alt 98376 29 + 119912 ATCCCCAGACAACGGTGCATCCATTATGT s panTro4.chr4 190365703 29 + 193495092 ATCCCCAGACAACTGTGCGTCCATTATGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195339562 27 + 198332218 ATCCCCAG--AACTGTGTGTCCATTATGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302239 29 + 115148730 ATCCCCAGACAACCGTGCGTCCATTATGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181104120 29 + 184069350 ATCGCTAGACAACCGTGCGTCCATTATGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186442304 29 + 189454096 ATCGCTAGACAACCGTGCGTCCATTATGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057061 29 + 178775436 ATCGCTAGACAACCGTGCGTCCGTTATGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132898763 29 + 135778131 ATCGCTAGACAACCGTGCGTCCATTATGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286118 29 - 190850796 ATTCCCAGACAACTGCGTGTCCATTATGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15768389 29 - 59632846 GTCCCTGGACAAATGAATGTCCATTAAGG i canFam3.chr16 C 0 C 0 e mm10.chr8 84764466 416 - 129401213 I a score=1173692.000000 s hg38.chr4_KI270785v1_alt 98405 408 + 119912 ATCAGgtgctagtctgttttgcattgctgtaaaggagtacctgagcctgggcaatttacaaaggaaagaggtttatttggctcaaggtcttgcaggttatacaggaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaactcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccagactcttttaaacaaccagatcttgtcagaactgatggagggagaattcactcattaccgtggggagggcaccatgcctttcataggggatctgcccccgtgacccaaacacctcccaccaggccccacctccaacacgggggatcacagttcaacctgagatttggaggggacaaacatccaaactatatc s panTro4.chr4 190365732 407 + 193495092 ATCAGgtgctagtctgttttgcattgctgtaaaggagtacctgagcctgggcaatttacaaaggaaagaggtttatttggctcaaggtcttgcaggttatacaggaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaactcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcagaactgatggagggagaattcactcattaccgtggggagggcaccatgcctttcataagggatctgtccccatgacccaagcacctcccaccaggccccacctccaacaccggggatcacagttcaacctgagatttggagggg-caaacatccaaagtatatc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195339589 407 + 198332218 TTCAtgtgctagtctgttttgcattgctataaaggagtacctgagcctgggcaatttacaaagaaaagaggtttatttggctcaaagtcttgcaggttatacaagaagcatggtgccagcatctgctcggcttctggtgaggccttaggaagttttaactcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcagaactaatggagggagaactcactcattaccgtggggagggcaccatgcctttcataagggacctgcccccatgacccaaacacctccccccaggccccaccaccaacaccggggatcacagttcaacctgagatttgcaggga-caaacatccaaactatatc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302268 366 + 115148730 ATCAtgtgctagtctgttttgcattgctataaaggaatacctgagcctgggcaatttacaaagaaaagaggtgtgtttggctcaaggtcttgcaggttatacaagaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaactcatggtggaaggtgaagggga----------------gcaagagagagaaccagagggatgaggaggtgccagcctcttttaaacaaccagatcttgtcagaactaatggagtgagaactcac------------------------------------------gcccccatgacccaaacacctcccaccaggccccacctccaacacccggaatcacagttcaacctgagatttggaggggacaaacatccaaactatatc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181104149 407 + 184069350 ATCAtgtgctagtctgttttgcattgctataaaggaacacctgagcctgggcaatttataaagaaaagaggtttatttggctcaaggtcttgcaggttacacaagaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaattcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcagaactaatggcgtgagaactcactcattaccatggggagggcaccaagccattcatgaggtatccacccccatgatacaaacacctcccaccaggccccacctccaacaccggggatcacatttcaacctgagatttggaagga-cacacatccaaacgatatc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186442333 407 + 189454096 ATCAtgtgctagtctgttttgcattgctataaaggaacacctgagcctgggcaatttataaagaaaagaggtttatttggctcaaggtcttgcaggttacacaagaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaattcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcagaactaatggagtgagaactcactcattaccatggggagggcaccaagccattcatgaggtatccacccccatgatacaaacacctcccaccaggccccacctccaacaccggggatcacatttcaacctgagatttggaggga-cacacatccaaacgatatc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057090 407 + 178775436 ATCATGTgctagtctgttttgcattgctataaaggaacacctgagcctgggcaatttataaagaaaagaggtttatttggctcaaggTATTGCAGGTTacacaagaagcatggtgccagcatctgctcagcttctggtgaggcctcaggaagctttaattcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagaTGAGGAGGTgctaggctcttttaaacaaccagatcttgtcaGAACTAatggagtgagaactcactcattaccatggggagggcaccaagccgtTCATGAGGTATCCACCCCCATGatacaaacacctcccaccaggccccacctccaacaccggggatcacatttcaacctgagatttggaggga-cacacatccaaacgaTATc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132898792 407 + 135778131 ATCAtgtgctagtctgttttgcattgctataaaggaacacctgagcctgggcaatttataaagaaaagaggtttatttggctcaaggtcttgcaggttacacaagaagcatggtgccagcatctgctcagcttctggtgaggcctccggaagctttaattcatggtggaaggtgaagggga----------------gcaagagagagaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcagaactaatggagtgacaactcactcattaccatggggagggcaccaagccgttcatgaggtatccacccccatgatacaaacacctcccaccaggccccacctccaacaccggggatcacatttcaacctgagatttggaggga-cacacatccaaacgatatc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286147 418 - 190850796 AGCAtgtgctaatctgttttgcattgctctaaagggatacctgagactgggcaat----agatagaagaggtttatttggctcaaggtcttgcaggctgtacaaggggcagggtggcagcatctgctcagcttctggtgaggcctcaggaagctttaactcatggtggaaggtgaagggtaggaagtgtgttacctggcaagagagggaaccagagagatgaggaggtgccaggctcttttaaacaaccagatcttgtcaggactaatggactgagaacacagtcatt-ccacgtggagggcaccaagccattcatgagggattcacccctgtgacccaaacacctcccaccaggctcctccatcaacact-gggatcacattacaacatgagatttggaagggacaaacatcaaaactatatc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15768418 0 - 59632846 C e mm10.chr8 84764466 416 - 129401213 I a score=1947.000000 s hg38.chr4_KI270785v1_alt 98813 2 + 119912 aC- s panTro4.chr4 190366139 2 + 193495092 aC- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195339996 2 + 198332218 aC- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302634 2 + 115148730 aC- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181104556 2 + 184069350 aC- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186442740 2 + 189454096 aC- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057497 2 + 178775436 ac- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132899199 2 + 135778131 aT- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286565 3 - 190850796 aTA i calJac3.chr3 C 0 C 0 s mm10.chr8 84764882 2 - 129401213 AT- i mm10.chr8 I 416 C 0 e canFam3.chr16 15768418 0 - 59632846 C a score=109560.000000 s hg38.chr4_KI270785v1_alt 98815 32 + 119912 ATCAGTAAATATTTATTAACTAATTTAAG-AAA s panTro4.chr4 190366141 33 + 193495092 ATCAGtaaatatttattaactaatttaagaaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195339998 33 + 198332218 ATCAGtaaatatttattaactaatttaagaaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302636 33 + 115148730 ATCAGTAAGTATTTATTAACTAATTTAAGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181104558 32 + 184069350 ATCAGTAAATATTTATTAACTAATTTAAGAAA- i rheMac3.chr5 C 0 I 335 s macFas5.chr5 186442742 32 + 189454096 ATCAGTAAATATTTATTAACTAATTTAAGAAA- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057499 32 + 178775436 atcagtaaatatttattaactaatttaagaaa- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132899201 32 + 135778131 ATCAGTAAATATTTATTAACTAATTTAAGAAA- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286568 32 - 190850796 ATCAGTAATTATTTATTAACTAATTTAGGGAA- i calJac3.chr3 C 0 C 0 s mm10.chr8 84764884 29 - 129401213 ATCAGTAAATATTTATTAAGAAA--AAAGGA-- i mm10.chr8 C 0 C 0 s canFam3.chr16 15768418 32 - 59632846 ATCAGTGAATTTTTGTCAACTACATTCAGAAG- i canFam3.chr16 C 0 C 0 a score=5655.000000 s hg38.chr4_KI270785v1_alt 98847 2 + 119912 AA s panTro4.chr4 190366174 2 + 193495092 aa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195340031 2 + 198332218 aa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302669 2 + 115148730 AA i nomLeu3.chr7b C 0 I 10 s macFas5.chr5 186442774 2 + 189454096 GA i macFas5.chr5 C 0 I 316 s papAnu2.chr5 176057531 2 + 178775436 ga i papAnu2.chr5 C 0 I 304 s chlSab2.chr7 132899233 2 + 135778131 GA i chlSab2.chr7 C 0 I 6 s calJac3.chr3 188286600 2 - 190850796 AA i calJac3.chr3 C 0 I 14 s mm10.chr8 84764913 2 - 129401213 AA i mm10.chr8 C 0 I 1 s canFam3.chr16 15768450 2 - 59632846 AA i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181104590 335 + 184069350 I a score=19009.000000 s hg38.chr4_KI270785v1_alt 98849 16 + 119912 AAACAAAAAATTGATG- s panTro4.chr4 190366176 16 + 193495092 aaacaaaaaattGATG- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195340033 16 + 198332218 aaacaaaaaattGATG- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111302681 16 + 115148730 AAACAAAAGATTGATA- i nomLeu3.chr7b I 10 C 0 s macFas5.chr5 186443092 16 + 189454096 AGACCAAAAACTAGTA- i macFas5.chr5 I 316 C 0 s papAnu2.chr5 176057837 16 + 178775436 agaccaaaaaCTAGTA- i papAnu2.chr5 I 304 C 0 s chlSab2.chr7 132899241 16 + 135778131 AGACCAAAAACTAGTA- i chlSab2.chr7 I 6 C 0 s calJac3.chr3 188286616 16 - 190850796 AACCCAAAAGCTTATG- i calJac3.chr3 I 14 C 0 s mm10.chr8 84764916 15 - 129401213 TAAACAAAATCCACT-- i mm10.chr8 I 1 C 0 s canFam3.chr16 15768452 15 - 59632846 --ACAAAAACCCACAAA i canFam3.chr16 C 0 C 0 e rheMac3.chr5 181104590 335 + 184069350 I a score=428829.000000 s hg38.chr4_KI270785v1_alt 98865 135 + 119912 TCTTTATCATATATCTTGCTTCTTCCTGTAAAAGCCATCAAACTTTCCATTT-AAAAAACCCACAATTTTTAGCCATTTTCTGATCTGTACTTTCTTT-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT s panTro4.chr4 190366192 135 + 193495092 TCTTTATCATATATCTTGCTTCTTCCTGTAAAAGCCATCAAACTTTCCATTT-AAAAAACCCACAATTTTTAGCCATTTTCTGATTTGTACTTTCTTT-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195340049 137 + 198332218 TCTTTATCATATATCTTGCTTCTTCCTGTAAAAGCCATCAAACTTTCCATTT-AAAAAACCCACAATTTTTAGCCATTTTCTGATGTGTACTTTTTTTATATAGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i ponAbe2.chr4 C 0 I 145 s nomLeu3.chr7b 111302697 135 + 115148730 TCTTTATCATATATCTTGCATCACCCTGTAAAAGCCACCAAATTTGCCATTT-AAAAAACCCACAATTTTTAGCCATTTTCTGATTTATACTTTCTTT-TA-AGCTTGTGAACATGG---CCCCAAGAA-------CGAGTTCACCTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181104925 136 + 184069350 TCTTTATCAGATATCTTACATCATCCTCTAAAAGCCATTAAACTTTCCATTTAAAAAAACCCACAATTTTTAACCATTTTCTGATGTGTACTTTCTTA-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i rheMac3.chr5 I 335 C 0 s macFas5.chr5 186443108 136 + 189454096 TCTTTATCAGATATCTTACATCATCCTCTAAAAGCCATTAAACTTTCCATTTAAAAAAACCCACAATTTTTAACCATTTTCTGATGTGTACTTTCTTA-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057853 136 + 178775436 TCTTTATCAGATATCTTACATCATCCTGTAAAAGCCATtaaactttccatttaaaaaaacccacaattttTAACCATTTTCTGATGCGTACTTTCTTA-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132899257 136 + 135778131 TCTTTATCAGATATCTTACATCATCCTGTAAAAGCCATTAAACTTTCCATTTAAAAAAACTCACAGTTTTTAACCATTTTCTGATGCGTACTTTCTTA-TA-AGCTTGTGAACATGT---CCCCAAGAA-------TGAGTTCACCTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286632 132 - 190850796 -TTTTATCATATAT-TTGTATCATCCTGTAAAAGTCATCCACTTTTCCATTTTAAAAAA--CACAATTTTTAGCTATTTTCTGACTTGGACTTTCTTT-TA-AGCTTCTGAACATGT---TCCTAAGAA-------TGAGTTCACCTT i calJac3.chr3 C 0 C 0 s mm10.chr8 84764931 130 - 129401213 --TCCATTCAACATCCT---TCATCCTGTAAAATCCACACTATTTTCCAACT--------CCACAGTTCTTAGCTAGTTGAgtgtgtgtgtgtgtgtg-tg-tgtgtgtgtgcgtgcgtgCTTCCAGAGTTCTTTCTGGGTTCAC--- i mm10.chr8 C 0 C 0 s canFam3.chr16 15768467 134 - 59632846 CCTCTACCATGTATCTTGCTTCACGATATGAAATCCATTAAATTTTCCACTAAAAAAAACC--CAGTGTTTAGCCATTTGCTGACTGGTTATTTCATT-CA-AGCTTGTGAGCCTTT---CCCCAGGGA-------CAGGTTCACTTT i canFam3.chr16 C 0 C 0 a score=108345.000000 s hg38.chr4_KI270785v1_alt 99000 34 + 119912 TCTTTCAATGTCTTTCCCTTTTTATATTGGAAAG s panTro4.chr4 190366327 34 + 193495092 TTTTTCAATGTCTTTTCCTTTTTATATTGGAAAG i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111302832 34 + 115148730 TCTTTCAATGTCTTTCCCTTTTTGTATTGGAAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181105061 34 + 184069350 TCTTTCAATGTCTTTCCCTTTTTATATTGGAAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186443244 34 + 189454096 TCTTTCAATGTCTTTCCCTTTTTATATTGGAAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176057989 34 + 178775436 TCTTTCAATGTCTTTCCCTTTTTatattggaaag i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132899393 34 + 135778131 TCTTTCAATGTCTTTCCCTTTTTATATTGGAAAG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188286764 34 - 190850796 TCTTTCAATGTTTTTCCCTTTTTATACTGGGGAG i calJac3.chr3 C 0 C 0 s mm10.chr8 84765061 32 - 129401213 --TTTCAAATCTTCTGCCTTTATATATTGGAAAG i mm10.chr8 C 0 C 0 s canFam3.chr16 15768601 34 - 59632846 CCTTTCAATATATTTCTTATTTCATACTGAATAA i canFam3.chr16 C 0 C 0 e ponAbe2.chr4 195340186 145 + 198332218 I a score=2235236.000000 s hg38.chr4_KI270785v1_alt 99034 659 + 119912 AAAAGGAAAGC-A--AAATGTATGCATGTGCA----------TGTATAtg--------------tgtgtgtgtgtg----------------tgtgtgtgtgtgtgt--------gtgtAGTTTATCAGAAAGGAAAAGCTCACCTTCCTTGATCACCCTGAGTTTGCTGCAAGCTGCTGACGGCAGCTAATCTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGTTGCACTGGAGTCCTCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTTGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCAGTTTAAATACTTCCTTGGTGCA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGAGAG-----TTTGTTCTCAAATTTATGAGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGCTCTCCAGTCGACATTACAGATATGGGTAAAATAGTAATCT-TTCCTATCAACCCACAGCCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCAGATGTATTAAGTTAATTGGACAGACACTGATGCAAGGTCTTAGTAGTAGCCGACTGTGGCTCGGTGCATTTCCTTAACATTCATAGATCA-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGTCAA--------------TGTGAt---t-------------------------------tctttctttctttcttt---------- s panTro4.chr4 190366361 669 + 193495092 AAAAGGAAAGC-A--AAATGTATGCATGTGCAGgtgtgtgtgtgtgtgtg--------------tgtgtgtgtgtg----------------tgtgtgtgtgtgtgt--------gtgtAGTTGATCAGAAAGGAAAAGCTCACCTTCCTTGACCACCCTGAATTTGCTGCAAGCTGCTGACGGCAGCTAATCTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGTTGCACTGGAGTCCTCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTTGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCTGTTTAAATACTTCCTTGGTGCA-GCCTGA-GGGTGGGAAGACTG--GGAGTGGGAGAGAG-----TTTGTTCTCAAATTTATGAGCTGTGAGTGC-AGGGAGCTTAAGTGCGGCAGCTCTCCAGTCGACATTACAGATATGGGTAAAATAGTAATCC-TTCCTATCAACCCACAGCCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCAGATGTATTAAGTTAATTGGACAGACACTGATGCAAGGTCTTAGTAGTAGCCGACTGTGGCTCGGTGCATTTCCTTAACATTCATAGATCA-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGTCAA--------------TGTGAT---T-------------------------------TCTTTCTTCCTTTCTTT---------- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195340331 660 + 198332218 AAAAGGAAAGCAA--AAAtgtatgcatgtgca----------tgtacgtg--------------tgtgtgtg---g----------------tgtgtgtgtgtgtgt--------gtgtAGTTTATCAGAAAGGAAAAGCTCACCTTCCTTCATCATCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTAAACTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGTTGCACTGGAGTCCTCTTGCAGGTCTTCCTTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTTGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCCGTTTAAATACTTCCTTGGTACA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGAGAG-----TTTGTTCTCGAATTTATGGGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGCTCTCCAGTTGACATTACAGATATGGGTAAAATAGTAATCC-TTCCTATCATCCCACAGCCCATAAAACGAATACCTTTTAGTGGTGTGGGCATAATTATCAGATGTATTAAGTTAATTGGACAGACACTGATGCAAGGTCTTAGTAGTAGCCGACTGTGGCTCGGTGCATTTCCTTAACATTCATAGATCG-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGTAAA--------------TATGATTTCT-------------------------------TCTTTCTTTCTTTCTTT---------- i ponAbe2.chr4 I 145 I 668 s nomLeu3.chr7b 111302866 664 + 115148730 AAAAGGAAAGC-A--AAATGTATGCATGTGCA----------TGTACgtg--------------tgtgtgtgtgtg----------------tgtgtgtgtgtgtgtgtAAGAGAGTATAGTTTATCAGAAAGGAAAAGCTCACCTTCCTTGATTACCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTAAACTGACATTTGTCTCATTGAAGCAGAAGAGCCGATGTGTTGCACTGGAGTCCTCTTGCAGGTCTT-CGTTCAGAAGGCTGCACTCTGCGTCACAGTGTCCTAGGCTTGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTGTTTCTTCCTGTTTAAATACTTCCTTGGTGCA-GCCTGA-GGGTTGGAAGCCTG--GGAGTGGGAGAGAG-----TTTGTTCTTGAATTTATGAGCTGTGAGTGC-GGGGAACTTAAGTGCAGCAGCTCTCCAGTCGACATTACAGATATGGGTAAAATAGTAATCC-TTCCTATCATCCCACAGCCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCGGACGTATTAAGTTAATTGGACAGACACTGATGCAAGGTCTTAGTAGTATTTGAC--TGGCTTGGTACATTTCCTTAACATTCATAGATTG-TATTTCAGATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGTAAA--------------TGTGAt---t-------------------------------tctttctttatttcttt---------- i nomLeu3.chr7b C 0 I 4 s rheMac3.chr5 181105095 643 + 184069350 AAAAGGAAAGC-T--AAATATATGCAtgcgtg----------tgtgtgtg--------------tgt--------------------------------gtgtgtgt--------gtgtAGTTTATCAGAAAGGAAAAGCTCATCTTCCTTGATCATCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTGCGTTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGATGCACCGCAGTCCTCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTAGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCCTTTTAAATGCTTCCTTGGTGCA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGACAG-----TTTGTTCTTGAATTTATGAGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGTTCTCCAGTCGACATTACAGATATGGGCAAAATAGTAATCC-TTCCTATCATCCCACAGTCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCAGAAGTATTAAGTTAATTGGACAGACACTGATGTAAGGTCTTAGTAGTAACTGACTGTGGCTTGGTGCATTTCCTTAACATTCACAGATCG-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGAAAA--------------TGTGAt---t-------------------------------tctttctttctttcttt---------- i rheMac3.chr5 C 0 I 4 s macFas5.chr5 186443278 659 + 189454096 AAAAGGAAAGC-T--AAATATATGCATGCgtg----------tgtgtgtg--------------tgtgtgtatgtg----------------tgtgtgcgtgtgtgt--------gtgtAGTTTATCAGAAAGGAAAAGCTCATCTTCCTTGATCATCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTACATTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGATGCACCGCAGTCCTCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTAGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCCTTTTAAATGCTTCCTTGGTGCA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGACAG-----TTTGTTCTTGAATTTATGAGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGTTCTCCAGTCGACATTACAGATATGGGCAAAATAGTAATCC-TTCCTATCATCCCACAGTCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCAGAAGTATTAAGTTAATTGGACAGACACTGATGTAAGGTCTTAGTAGTAACTGACTGTGGCTTGGTGCATTTCCTTAACATTCACAGATCG-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATATATTCTTGGAAAA--------------TGTGAt---t-------------------------------tctttctttctttcttt---------- i macFas5.chr5 C 0 I 4 s papAnu2.chr5 176058023 652 + 178775436 aaaaggaaagc-a--aaatatatgcatgcgtg----------tgtgtgtg--------------tgtgtgtgtgtg----------------tgtgt--gtgtgtgt--------gtgt-gtttatcagaAAGGAAAAGCTCATCTTCCTTGATCATCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTGCGTTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGATGCACCGCAGTCCCCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTAGCTGCAGCCCTTCCAGCTGGTgagctgctttttttcttcccttttaaatactTCCTTGGTGCA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGACAG-----TTTGTTCTTGAATTTATGAGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGTTCTCCAGTCGACATTACAGATATGGGCAAAATAGTAATCC-TTCCTATCATCCCACAGTCCATAAAACGAATACCTTTTAATGGTGTGGGCATAATTATCAGAAGTATTAAGTTAATTGGACAGACACTGATGTAAGGTCTTAGTAGTAACTGACTGTGGCTTGGTGCATTTCCTT-ACATTCACAGATCG-TATTTC-AATGACTGTTGCT--GAGAACTCCCAAATATATTCTTGGAaaa--------------tgtgat---t-------------------------------tctttctttctttcttt---------- i papAnu2.chr5 C 0 I 4 s chlSab2.chr7 132899427 649 + 135778131 AAAAGGAAAGC-A--AAATATATGCAtgtgtg----------tgtgtgtg--------------tgtgtgtgt--------------------------gtgtgtgt--------gtgtAGTTTATCAGAAAGGAAAAGCTCATCTTCCTTGATCATCCTGAGTTTGCTGCAAGCTGCTGATGGCAGCTGCATTGACATTTGTCTCATTGAAGTGGAAGAGCAGATGTGTTGCACCGCAGTCCTCTTGCAGGTCTTCCGTTCTGAAGGCTGCACTCTGCGTCACAGTGTCCTAGACTAGCTGCAGCCCTTCCAGCTGGTGAGCTGCTTTTTTTCTTCCCTTTTAAATACTTCCTTGGTGCA-GCCTGA-GGGTTGGAAGGCTG--GGAGTGGGAGAGAG-----TTTGTTCTTGAATTTATGAGCTGTGAGTGC-AGGGAACTTAAGTGCGGCAGTTCTCCAGTCGACATTACAGATATGGGCAAAATAGTAATCC-TTCCTATCATCCCACAGTCCATAAAATGAATACCTTTTAATGGTGTGGGCATAATTATCAGAAGTATTAAGTTAATTGGACAGATACTGATGTAAGGTCTTAGTAGTAACTGACTGTGGCTTGGTGCATTTCCTTAACGTTCACAGATTG-TATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATAAATTCTTGGAAAA--------------TGTGAt---t-------------------------------tctttctttctttcttt---------- i chlSab2.chr7 C 0 I 4 s calJac3.chr3 188286798 687 - 190850796 AAAAGGAAAGA-A--AAGCGTGTTCATGTACA----------tgtgtgtgcatgcacgtgtccatgtgtgtgtgtgcacgcacgcgtgtgcatgtgcgtgtgtgtgt--------gtgtAGTTTGTCAGAGAGGAAAAGCTCACCTTCCTTGATCACCCTGAGTTTGCTGCAGGCTGCTGACAGCAGCTCAATTGCCATTTGTCTCAATGAAGTGAGAGAGCAGCTGTGCGGCCCC-CAGCCACCTTGCCCGTCTTCCCTTCGGAAGACTCCACTCTGCCTCACAGTGTCCTAGACTTCCTGCGGCCCTTCCAGCTGCTCAGCTGCTTTTCTCCTTCCCACGTAAACACTTCCTTGGTGCA-GCCTGA-GGGTGGGAAGGCTG--GGGCTGGGAGAGAG-----TTT-TTCCTGGATTTATGAGCTGTGAGGGC-AGGGAACTTAAGTGCGGCGGTTCTTCAGTCGACATTAGAGATACGGGCAAGATAGTAATCC-TTCCTCTTATGCCACAGTCCATAAAACGAATACCTTTTAACGATGTGGGCATAATTATAGGAAGTATTAAGTTAATTGAACAGACACTGATGCAGGGTCTTAGTAGTA-CCGACTGTGGCTCGGTGCATTTCCTTAACATTCGCAGATCGTTATTTCAAATGACTGTTGCTGAGAGAACTCCCAAATAGATTCTTGGCAAA--------------TGTGAT---T-------------------------------TCTTTCTTTCTCTCTTA---------- i calJac3.chr3 C 0 I 2 s mm10.chr8 84765093 660 - 129401213 CAAAGCAAAGC-ATCAAATGTGCCCATGTGCA----------CAAATGTG--------------TGTGTCAGAGGG---------------------------AAGT--------GTATACTTACTTAGGAAGAAAAAGCTTACCCATCCATA----CCTGAGCAT-CTTCTGGACCCTGAAGGCAGCTACCTTGATATATGGGCTGCTGAAGT-------CATATGCAAGACTTC--------TTTGCAGGGGTCTGCCTCAGAAGACTC--CTCTGTATTACAATCCTCCAGACTTCCTGCAATCCTTCCTGCTGG-----GGCTGATTTTGCCCCTGTGTAAATTCTTGCTGGGTGTAGGCCCGA-GGGTTATCAGGGTGCTGGGTGAGGACAGGG-----TTTGCTCTTCAAATTGTGAAATGT--GTGC-GG-------AAGTGCTGCAGTTTCTCAGTCTACATTACCAAGGTGGGCAACATAATAATCCTTTTTTACCATCTCCCAGTGCATAAAATGAATCCCTTCTAACAGTGTTGGTGAAATGA-AAAAAAAATTAAGTTAATTGAACAGACATGGGTGGCA-GTCTGAGTAACTCCTGACTGAGCCTGGGTGCAATGTTTTAGTGCTCCTTAATGC-TATGGCAAGTCGTTGTTGCAGAGAGAA-GACCATATAGATCCTTGGTGAACTGCACTCTTTCCCTACCAT---TCTGTCtccctcctcccttcttcttccccttgtctttccttccttctcc---------- i mm10.chr8 C 0 I 60 s canFam3.chr16 15768635 611 - 59632846 -AAAGGA-----A--AAgtgtatgtatgtgtg----------tgtgtgtg--------------tgtgtgtgtgtg----------------tgtgtgtgt-tgtgt--------gtACAGTTTACCAAGAAGGAGAAATACTCCTTCCATGATCACACTGAGTTCATGTCCTGTCGCCCACAGCAGCTCCAATGACATGTGTTTCCTGGAAATGGAGGTGCAGGTAGGGTTGGCCATGCACCTTCTGCAGGTCT---------------------------GCAGTCTCCTAGCATCCGTGCTG--CTTCCGTCTTGTG-------------------GTCAAAATACTTCCTCACTGCATGCCTCACGGCTTGGAAGGCTG--GGCCGGGGCCACAGACTTTTTTGTTCTTGAATTTATGAACTGTGTGTGTGAGAAAACTGAAGGGCTGCACTTCTTCAGCTGCCGTCATAGATATGGGCAAAATAATCATCC-TTTTTATCATCCCACAGTCCATAAAATGAATGCCTTTTAATGGTGTGGGCATAATTAAAGGAAATATTAAGTTAATTGGACAGACACCGAGCTAAGATCTTAGCAGTAACTGACTGTGGCTAAGTGCATTGCATTCAGACTCTCAGGTTG-TATTTCAAGTGACTATTGCTGA------------ATATATTCTTGGCAAA--------------TATGGT---T-------------------------------TGTTTCTTTCATTTCTTCTTCTTCTTT i canFam3.chr16 C 0 C 0 a score=3348334.000000 s hg38.chr4_KI270785v1_alt 99693 880 + 119912 -tttAAAAGCTCATCATCTCCACT--------GAGCCTTAACAATTTACATTAAAAATGCCATTTGGAGCCTCCCCGTCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTTTTCACAAGGTTGCGACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTGCTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTCCTAGCATATCGGCCACCAATAAAATGAAAGAGAATAATCCTGACTAAATTCATAGCCA--TTTTTACAGCATATCTGATCATGCCTTTTATTGACAGAGAGTAATATGCA-TT-AAAGTAATCTCTTGAAAGCC-TTTTTTCAAAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGACTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCTCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCGTTAGGTGACTCAGAGCT-AGGAAGAACGG-TT-ACAGAGTCCATGCCAGCAACCAGCTGTTGGCCTCAC----AG-GTGCAAAGGAGGCAGCACTAGGTGACTGGGGGTT--ACAGTCGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAAGGTCA-ACGATGATACAGATGTGGATGCAATAGCATGGAGCCCATTTCAACCACCTTAGC---ATTTGGCTAAGCCATTCATCAAAGGCCTCACATCAAGCCAAGCCTTTCTCTGTCCTCCCCACA s panTro4.chr4 190367030 880 + 193495092 -TTTAAAAGCTCATCACCTCTACT--------GAGCCTTAACAATTTACATTAAAAATGCCATTTGGAGCCTCCCCGTCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTTTTCACAAGGTTGCGACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTGCTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTCCTAGCATATCGGTCACCAATAAAATGAAAGAGAATAATCCTGACTAAATTCATAGCCA--TTTTTACAGCATATCTGATCATGCCTTTTGTAGACAGAGAGTAATATGCA-TT-AAAGTAATCTCTTGAAAGTC-TTTTTTCAAAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCTCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCATTAGGTGACTCAGAGCT-AGGAAGAACGG-TT-ACAGAGTCGATGCCAGCAACCAGCTGTTGGCCTCAC----AG-GTGCAAAGGAGGCAGCACTAGGTGACTGGGGGTT--ACAGTCGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAAGGTCA-ACGATGATACAGATGTGAATGCAATAGCATGGAGCCCATTTCAACCACCTTAGC---ATTTGGCTAAGCCATTCATCAAAGGCCTCACATCAAGCCAAGCCTTTCTCTGTCCTCCCCACA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195341659 885 + 198332218 -tttAAAAGCTCATCATCTCCACT--------GGGCCTTAACAATTTACATTAAAAATGCCATTTGGAGCCTCCCCGTCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTCTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTGCTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTACTAGCATATCAGTCACCAATAAAATGAAAGAGAATAATCCTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATGCCCTTTATAGACAGAAAGTAATATGCA-TT-AAAATAATCTCTTGAAAGTC-TTTTTTCAAAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCATGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCTTTAGGTGACTCAGAGCT-AGGAAGAACGG-TT-GCAGAGTCGATGCCAGCAACCAGCTGTTGGCCTCACAGGTAG-GTGCAAAGGAGGCAGCACTAGGTGACTGGGGGTT--ACAGTCGCCCCTGGAGCTCAGTGATGGTGCCAGAGGATTCCTCCTCCAAGGTCA-ACAATGATACAGATGTGGATGCAATAGCATGGAGCCCATTTCAACCACCTTAGC---ATTTGGCTAAGCCATTCATCAAAGCCCTCACATCAAGCCAAGCCTTTCTCTGTCCTCCCCACA i ponAbe2.chr4 I 668 C 0 s nomLeu3.chr7b 111303534 880 + 115148730 -tttAAAAGCTCATCATCTCCACT--------GAGCCTTAACAATTTACATTAAAAATGCCATTTGGAGCCTCCCCGTCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTTTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTT-TCTTTT-------ATGTACTTGCTTCAAAGCAGGCTTATATTTTCTTGGTATCTTTTACTAGCATATCAGTCACCAATAAAATGAAAGAGAATAATCCTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATGCCCTTTATAGACAGAGAGTAATATGCA-TT-AAAATAATCTCTTGAAAGTC-TTTTTTCAAAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCATGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGTTATGTTCATGCTGCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTACGCCCCC-GAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCTTTAGGTGACTCAGAGCT-AGGAAGAACGG-TTAACAGAGTCAATGCCAGCAACCAACTGTTGGCCTCAC----AG-GTGCAAAGGAGGCAGCACTAGGTGACTGGGGGTT--ACAGTCGCCCCTGGAGCTCAGTGAGGGTGCCAGAGGATTCCTCCTCCAACGTCA-ACGATGATACAGATGTGGATGCAATAGCATGGAGCCCATTTCAAACACCTTAGC---ATTTGGCTAAGCCATTCAACAAAGGCTTCACATCAAGCCAAGCCTTTCTCTGTCCTCCCCACA i nomLeu3.chr7b I 4 C 0 s rheMac3.chr5 181105742 879 + 184069350 -tttAAAAGCTCATCATCTCCACT--------GAGCCTTAACAATTTACATTAAAAATGCTATTTGGAGCCTCCCCATCA-TTTTCCCTTTAGCCTTACTG-AAAATTGCTTGCTTTTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTACTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTACTAGCATATCAGTCACCAAAAAAATGAAAGAGAATAATCTTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATACCCTTTATAGACAGAGAGTAATATGCA-TT-AAAATAATCTCTTGAAAGTC-TTTTTTC-AAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCTTTAGTTGACTCAGAGCC-AGGAAGAACGA-TT-ACAGAGTCGACGCCAGCAACCAGCTGCTGGCCTCAC----AG-GTGCAAAGGAGGTAGCACTAGGTGACTGGGGGTT--ACACTTGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAGGGTCA-GTGATGATACAGATGTGGATGCAATAGCATGGAACCCATTTCAACCACTTTAGC---ATTTGACTAAGCCATTCATCAAAGGCCTCA-ATTAAGCCAAGCCTTTCTCTGTCCTCCCCACA i rheMac3.chr5 I 4 C 0 s macFas5.chr5 186443941 879 + 189454096 -tttAAAAGCTCATCATCTCCACT--------GAGCCTTAACAATTTACATTAAAAATGCTATTTGGAGCCTCCCCATCA-TTTTCCCTTTAGCCTTACTG-AAAATTGCTTGCTTTTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTACTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTACTAGCATATCAGTCACCAAAAAAATGAAAGAGAATAATCTTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATACCCTTTATAGACAGAGAGTAATATGCA-TT-AAAATAATCTCTTGAAAGTC-TTTTTTC-AAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCTTTAGGTGACTCAGAGCC-AGGAAGAACGA-TT-ACAGAGTCGACGCCAGCAACCAGCTGCTGGCCTCAC----AG-GTGCAAAGGAGGTAGCACTAGGTGACTGGGGGTT--ACACTTGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAGGGTCA-GTGATGATACAGATGTGGATGCAATAGCATGGAACCCATTTCAACCACTTTAGC---ATTTGACTAAGCCATTCATCAAAGGCCTCA-ATTAAGCCAAGCCTTTCTCTGTCCTCCCCACA i macFas5.chr5 I 4 C 0 s papAnu2.chr5 176058679 881 + 178775436 -tttaaaagctcatcatCTCCACT--------GAGCCTTaacaatttacattaaaaatgctATTTGGAGCCTCCCCATCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTTTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTACTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTACTAGCATATCAGTCaccaataaaatgaaagagaataatCTTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATACCCTTTATAGACAGAGAGTAATATGCA-TT-AAAATAATCTCTTGAaagtc-ttttttc-aaaaaaatttgttttggt---------ctttatctttc-ctttctaAGTGTCTGGACTGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCatgcttctcattttattttattcgtTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCCTGAGGCtaaacttttgatttaaaattatttgaagctCTCGGCTCCCTGGGTTGTGGAGTGCATACAGATCCATCTATGGCTTTAGGTGACTCAGAGCC-AGGAAGAACGA-TT-ACAGAGTCGATGCCAGCAACCAGCTGCTGGCCTCA-----AG-GTGCAAAGGAGGTAGCACTAGGTGACTGGGGGTT--ACACTTGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAGGGTCA-GTGATGATACAGATGTGGATGCAATAGCATGGAACCCATTTCAACCACTTTATCCTAATTTGACTAAGCCATTCATCAAAGGCCTCA-ATTAAGCCAAGCCTTTCTCTGTCCTCCCCACG i papAnu2.chr5 I 4 C 0 s chlSab2.chr7 132900080 880 + 135778131 -tttAAAAGCTCATCATCTCCACT--------GAGCCTTAACAATTTACATTAAAAATGCTATTTGGAGCCTCCCCATCA-TTTTCCCTTTAGCCTTACTG-AAAAATGCTTGCTTTTTTACAAGGTTGCAACACTTAGAATCAGGACCAAGGGTTATGGCTACTAAATTCCAAGTTGTCTTTT-------ATGTACTTACTTCAAAGCAGGCTTATATTTTCTTAGTATCTTTTACTAGCATATCAGTCACCAATAAAATGAAAGAGAATAATCTTGACTAAATTCATAGCCA-TTTTTTACAGCATATCTGATCATACCCTTTATAGACAGAGAGTAATATGCA-TT-AAAATAATCTCTTGAAAGTCTTTTTTTC-AAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACCGTGTATAATAGGAAGCATAAATTCCCTTTCCAGTGAC----TGCTATGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCCTGAGGCTAAACTTTTGATTTAAAATTATTTGAAGCTCTCGGCTCCCTGGGTTGTGGAGTGCATATAGATCCATCTATGGCTTTAGGTGACTCAGAGCT-AGGAAGAACGA-TT-ACAGAGTCGACACCAGCAACCAGCTGCTGGCCTCAC----AG-GTGCAAAGGAGGTAGCACTAGGTGACTGGGGGTT--ACACTTGCCCCTGGAGCTCAGCGATGGTGCCAGAGGATTCCTCCTCCAGGGTCA-GTGATGATACAGATGTGGATGCAATAGCATGGAACCCATTTCAATCACTTTAGC---ATTTGACTAAGCCATTCATCAAAGGCCTCA-ATTAAGCCAAGCCTTTCTCTGTCCTCCCCACA i chlSab2.chr7 I 4 C 0 s calJac3.chr3 188287487 880 - 190850796 -TTTAAAAGCACATCATATCCACT--------GGGCCTTAACAATTTACATTAAAAATGCTATTTGGAGCCTCCCCATCA-TTTTCTCTAGAGCCTTACTGAAAAAACGCTTGCTTTTTTATAAGGTTGCAATACTTAGAATCAGGACCGAGGGTTGTGGGTGCTAAATTCCAAGTTGTCTTTT-------ATGCACTTGCTTCGAAGCAGGCTTATATTTTCTTGGTATCTTTTACTAGCATATCACTCACCAATAAAATGAAAGAGAATAATCCTGACTAAATTCATAGCTTTTTTTTTACTGCATATCTGATCATATCCTTTATAGACAG--AGTAATATGCA-TT-AAAATAATCTCTTGAAAGTC-TTTTTTCAAAAAAAATTTGTTTTGGT---------CTTTATCTTTC-CTTTCTAAGTGTCTGGACTGTGTCTAACAGGAAGCATAAATCCCCTTTCCAGTGAC----TGCCGTGTTCATGCTTCTCATTTTATTTTATTCATTCTGTTTTATGGATTTTGCAAAGCTGACTTTTGGTTAACCTTATGCCCCGTGAGGCTAAACTTTTGATTTAAAATTATTTGACGCTCTCAGCTCCCTGGGTTGTGGAGTACATATATATCCATCTATGGCTGTAGGTTACTCAGAGCT-AGGAAGAATGG-TT-ACAGAGTCAATGCCAGCCACCAGCTGCTGACCTCAC----AG-GTGCAAAGGAGGCAGCACTAGGTGACTGGGAGTT--ACAGTCG-CCCTGCAGCTCAGTGATGGTGCCGGAGAGTTCCTCCTCCAGGGTCA-ACGATGACACAGATGTAGACACAGTAGCACGGAGCCCATTTCAACCGCGTTAGC---ATTTGGCTAAGCCATTCATCGAAGTCCTCACGTTAAGCCAAGCCTTTCTCTGTCCTCCCCACA i calJac3.chr3 I 2 C 0 s mm10.chr8 84765813 846 - 129401213 -tccAAAACTTTGTCATCATCACTTTTCAATGGGGCAT--ATAGATGGCATT--AAACCCTATTTGATGTTCCTCCATCA-GATTCTCCACAGCTTCACTG-AAAACTGCTTATTTT----CATGAGTCCAACACTCAGAACC-----------TTATGG-TACTAAATTCCTAGCTTCTTTTTTTTAAAAATATACTTGCTTCAAAGCAAGCTTGTATTTTCCTCATGCCTTATACTAGTGTTCCAATCACCAATAAAATATAAGAGGGAAATCCTGACTAAATTTAGAACCC-TTTCCCACAGAGGATCTGATGATGCTCTTTAAAGATAAATCCTGCAATGCA-TTCAAAATGATAAAGGGAAACTC-TTCTTAAAAGTGGGGGCTGGTGGGAG---------TCATGTCTTTCTTTTTTTTTATATCTGAACTGTGGGTGATAGAGATTATAAATCCTTTTTCCAGCAAA----TGCTATGTTCATGTTTCTCACTT--TTTCATTCATTC--TTTTAT-GATTTCACAAAGCTGACTTCCAGTTAACTTCATGCCCTTAGAGGCTAAACCTTTGCTTTAAAGCTGTTTGAAGGTTTGGACACACTAATTTCTATAACGTATGTA----CTCTCAAGGCTGTCAGTGACCTAGTATTGAGGGAAAGCAGCTT-TGAGGATTGAT--TGACAATCAGCTTCTGGTCTTAC----AGAGTTCATAGGTGGTCACACCAAACAGCTAGGCATC--CCGTTTCCCCATATTGCTCAGTGATGGTGCTGGAGGATTCCTCTCACAGGGTCCTGTGACAATGTGCATGTAGTTGTAACATCATTTGACAAA-TTCAACCAGTTCTGC---AT----CTGAGTGATTCATAG-----CTGACATCTAGCA--------CCCTGCCTT------- i mm10.chr8 I 60 C 0 s canFam3.chr16 15769246 862 - 59632846 TTTTAA---TTTATCA-CTCTACT--------GTGCCTCAACAA-TTACATTAAAAATGCTATTTTGAGTCTCCCCACCATTTTTTCCTGCGGCCTCACTGAAAAAATGTTTGCTTTTCTGCAAAGTTGCAATGCTTGGAACCAGGACTAAGGATGATGGCCAGTAAATTCCAAGTCTTCTCTT------AATGTGTTTGCTTCAGAGCAGGCTTATATTTTTCTAGTATCTTTTATTAGTGTTTCAGTCACCAAAAAAATTAAAGAGGATAATTCTGACCAAATTAGTAGCTA-TTTTTCATGGCATATCTGATAATGTCCTTTATAGATAAAGTGTAATATGCACTT-AAAATAATCTCTTGAAACTC-TCTCTTCAAAATATATTTTTTTTGGTCAAGTCTTACATTTTCTTTC-CTTTGTAAGAGTCTGGATCATGTATAATAGAGGACATAAGTTCCCTTTCCAGTGACTACTTACTATGTTCATGATTCTCATTTTATTTTATTCACTCTATTTTATGGATTTTGCAAAGCTGACTTCCAGTTAACCTTATGCTCCGTGAGGCTAAACTTTTGATTGAAAATTATCTGATGCTTTGAACT--CTGGATGCTCCAGTGCATACAGACCTATCTAAGGTTTTGGGTGACTCAGAGCT-A-GAAGTGAGC-TT-CCAGAGTTGATGTCATTAACCAGGTGCTGACCCCAT----GG------------GGTGCACTAGGTGGCTAAGAGTTAAACAGCATTACCTGTAGATCAGTGATGGTGCTA-AGAGTTCCTCGTCCCTGGTCACATTATAGCATGGACACATCTCTAGCAGCATATGGTCCATTTCAAATTCTTCAGC---ACTTGGCTAAGCAATTCATGGAAGGCCTCACATCAA--------------------CACCACA i canFam3.chr16 C 0 C 0 a score=290780.000000 s hg38.chr4_KI270785v1_alt 100573 105 + 119912 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTCACCTTTCTAGGTGCTTGTTCCTTTCATTTCCCTCTATCCATGG s panTro4.chr4 190367910 105 + 193495092 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTCGCCTTTCTAGGTGCTTGTTCCTTTCGTTTCCCTCTATCCATGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195342544 105 + 198332218 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCACTGTAAGCTCTTCGTTCTCTCACCTTTCTAGGTGCTTGTTCCTTTCATTTCCCTCTATCCATGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111304414 105 + 115148730 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAACTCTTCATTCTCTCACCCTTCTCGGTGCTTGTTGCTTTCATTTCCCTCTATCCATGA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181106621 105 + 184069350 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTCGCCCGTCTAGGTGCTTGTTTCTTTCATTTCCCTCCATCCACGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186444820 105 + 189454096 CTGGTCTGGGCAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTCGCCCGTCTAGGTGCTTGTTTCTTTCATTTCCCTCCATCCACGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176059560 105 + 178775436 CTGGTCTGGGCAGTAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTCGCCTGTCTAGGTgcttgtttctttcatttccctCCATCCACGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132900960 105 + 135778131 CTGGTCTGGGTAGCAGCTTCATGCACTAGGGCAGTACACCCCTGTAAGCTCTTCATTCTCTTGCCCGTCTAGGTGCTTGTTTCTTTCCTTTCCCTCCATCCACAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188288367 96 - 190850796 CTGGTTTGGGCAGCCACTGCACTCCTTAGGGCAGCACACCCCTGTAAG---------CTCTCACCCTTCTAGGTGCCTGTTTCTTTCATTTCTGTCCATCCGCTA i calJac3.chr3 C 0 C 0 s mm10.chr8 84766659 57 - 129401213 ---GTGTGGACA---------------------------CCCTGT---CTCTTTAAGCTCTGGCTACTTT------CTGTTGCTTTGAGCT---------TAACA i mm10.chr8 C 0 C 0 e canFam3.chr16 15770108 0 - 59632846 C a score=1139698.000000 s hg38.chr4_KI270785v1_alt 100678 347 + 119912 GGCTTCTTTGTGCTTCCCTTCCAGACTTTGCAACCTTAGTTTGACATTTATTGCAACTGTCACCAACATTGTAGACTTCCTTATCTC--AACCTTTGACTGTGATTGTCATGCCACTTTAGGAAAAATACCCCACTTCA-CTTCCCCA-----TCCATATTCTCTGCTATTGCACCAAGCTTAAGAGACTTGAAAAAGTTCTAGACCTA---GGATGCCTTGGACC---TGTCTCT-TCTCTCTACCTCA----GTAATACACAATCCTGCTTC--ATTGCAAAGACTGACATTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATCTCTAGGCCTTAGCTTTGCTCTGATCGCTA s panTro4.chr4 190368015 347 + 193495092 GGCTTCTTTGTGCTTCCCTTCCAGACTTTGCAACCTTAGTTTGACATTTATTGCAACTGTCACCAACATTATAGACTTCCTTATCTC--AACCTTTGACTGTGATTGTCATGCCACTTTAGGAAAAATACCCCACTTCA-CTTCCCCA-----TCCATATTCTCTGCTATTGCACCAAGCTTAAGAGACTTGAAAAAGTTCTAGACCTA---GGATGCCTTGGACC---TGTCTCT-TCTCTCTTCCTCA----GTAATACACAATCCTGCTTC--ATTGCAAAGACTGACATTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATCTCTAGGCCTTAGCTTTGCTCTGATCGCTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195342649 349 + 198332218 GGCTTCTTTGTGCTTCCCTTCCAGACTTTGCAACCTTAGTTGGACATTTATTGCAACTGTCACCAACATTATAGACTTCCTTATCTCTTAACCTTTGACTGTGATCGTCATGCCACTTTAGGAAGAATACCCCACTTCA-CTTCCCCA-----TCCATCTTCTCTGCTATTGCACTAAGCTTAAGAGACTTGAAAAAGTTCTAGACCTA---GGATGCCTTGGACC---TGTCTCT-TCTCTCTTCCTCA----GTAATACACAATCCTGCTTC--ATTGCAAAGACTGACATTCGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATCTCTAGGCCTTAGCTTTGTTCTGATCGCTA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111304519 349 + 115148730 GGCTTCTTTGTGCTTGCCTTCCAGACTTTGCAACCTTAGTTGGACATTTATTGCAACTGTCACCAACATTATAGACTTCCTTATCTCTTAACCTTTGACGGTGATCATCATGCCACTTCAGGAAGAATACCCCACTTCG-CTTCCCCA-----TCCATCTTCTCTGCTACTGCACCAAGCTTAAGAGACTTGAAAAAGTTCTAGACCTA---GGATGCCTTGGACC---TGTCTCT-TTTCTCTTCCTCA----GTAATACACAATCCTGCTTC--ATTGCAAAGACTGACATTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATCTCTAGGCTTTAGCTTTGTTCTGATCGCTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181106726 349 + 184069350 GGCTTCTTAGTGCTTCCCTTCCAGGCTTTGCAACCTTAGTTGGACATTTATTGCAACTGTCACCTACATTATAGACTTCCTTATCTCTTAACCCTTGACTGCGATCATCATGCCACTTTAGGAAGAATACCCCACTTTA-CTTCTCCA-----TCCATCGTCTCTGCTTTTGCACCAAGCTTAAGAGACTTGAATAAGTTCTAGACCTA---GGATGCATTGGACC---TGTCTCT-TCTCTCTTCCTCC----CTAGTACACAATCCTGCTTC--ATTGCGAAGACTGACGTTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATTTCTAGGCCTTACCTTTGTTTTGAGCTCTA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186444925 349 + 189454096 GGCTTCTTAGTGCTTCCCTTCCAGGCTTTGCAACCTTAGTTGGACATTTATTGCAACTGTCACCTACATTATAGACTTCCTTATCTCTTAACCCTTGACTGCGATCATCATGCCACTTTAGGAAGAATACCCCACTTTA-CTTCTCCA-----TCCATCGTCTCTGCTTTTGCACCAAGCTTAAGAGACTTGAATAAGTTCTAGACCTA---GGATGCATTGGACC---TGTCTCT-TCTCTCTTCCTCC----CTAGTACACAATCCTGCTTC--ATTGCGAAGACTGACGTTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATTTCTAGGCCTTACCTTTGTTTTGAGCTCTA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176059665 349 + 178775436 GGCTTCTTAGTGCTTCCCTTCCAGGCTTTGCGACCTTAGTTGGACATTTATTGCAACTGTCACCTACATTATAGATTTCCTTATCTCTTAACCCTTGACTGCGATCATCATGCCACTTTAGGAAGAATACCCCACTTTA-CTTCCCCA-----TCCATCGTCTCTGCTTTTGCACAAAGCTTAAGAGACTTGAATAAGTTCTAGACCTA---GGATGCATTGGAcc---tgtctct-tctctcttcctcc----ctagTACACAATCCTGCTTC--ATCGCGAAGACTGACGTTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATTTCTAGGCCTTACCTTTGTTCTGAGCTCTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901065 349 + 135778131 GGCTTCTTAGTGCTTCCCTTCCAGGCTTTGCAACCTTAGTTGGACATTTATTGCAACTGTCACCTACATTATAGACTTCCTTATCTCTTAACCCTTGACTGCGATCACCATGCCACTTTAGGAAGAATACCCCACTTCA-CTTCCCCA-----TCCATCTTCTCTGCTTTTGCACCAAGCTTAAGAGACTTGAAAAAGTTCTAGACCTA---GCATGCATTGGACC---TGTCTCT-TCTCTCTTCCTCC----CTAGTACACAATCCTGCTTC--ATTGCGAAGACTGATGTTAGCTCTGAAAACTCAGTTCTCCCAACTTGCCCTGAAATGTGTATTTCTAGGGCTTACCTTTGTTCTGCGCTCTA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188288463 348 - 190850796 GGCTTTTTCGTGCTTCCCTTCCAGACTTT-CCCCCTTGGTTGGATATTTACTGTAATTGTCACCAACACTGTAGACTTCCTTATCTCTTAACCTTTGATTGTGATCGCCATGCCAATTTAAGAAGAATACCCCACTTCA-TTTCCCCG-----TTGGTCTTTTCTGCTATTGCACCGAGCTTAAGAGGCTTGAGAACGTTCTACACCTA---GGATGCCCTGGACC---CTTCTCT-TCTCTCTTCTTCA----GTAACATGCAATCCTACTTC--ATTGCAAAGGCTGACGTTCGCTCTGAAAGCTCAGTTCTCTCAAGTTGCCCTTGAATGTGTATCTCTAGGCCTTACCTTTGTTCTGAGCTCTC i calJac3.chr3 C 0 C 0 s mm10.chr8 84766716 309 - 129401213 GGTTGCATAGTGCTTTCACCCTAGG-TTTGTCTCCTTATGTG----CTTAGTGTAATTCTCACCAACAATGTTGGCTTCTTTATCCCTTAATCT---ATTGTGATCATTAAACCAGTTCTGGAAGAAAACC-----------TGCTGA-----CCAATTTTCTCTGCCATTGCACCACTACTGAAAGAC-TAAAGAAATGCTAAACCT-----------TTGGAGG---TTGCTGC-TCTGCCTTTGTCC----------CACTTCAGTGCTGCGGATCACAAGAAATTCCATCTCTTTTGGAGACTCAGTTCTTCC----TGCC-----ATCTCCACCTGAACACCATGCCTTTATTCTGATCTCTA i mm10.chr8 C 0 I 735 s canFam3.chr16 15770108 287 - 59632846 -------------------------------------------------------------------------GACTTCTTTTTCTCTTAACCTTTAATTGTGACCATTGAGCCAATTCTGGAATA----TCCACTTCACCCTCCCCACACTCCCAATCCTCCTTATTCTTACACCAAGCTTAAAAG-CTTGAGAAAGTTCCAGACTTATGTGGATG-ATTGGACCCAATAGCTCTATCTCCCTCCCTCAATAAGTAATTTATAATCCTATTTC--ACTGCGTAGATGAATGTTATCTCTAGAAACTCTACTTGCCTAATTTCCCCTGAAATGTATATCTCTAAGTCTTACCTTTATTCTGAGTTTTA i canFam3.chr16 C 0 C 0 a score=1165624.000000 s hg38.chr4_KI270785v1_alt 101025 369 + 119912 TCCCCTTTACTAAATAAATTGATGCTCTTTT---------------TATCAATGTGTACCTTCATGTCCACCCTCCCTTTTAATACAGTC------------TGTATAGgtaggaggagcccactgtttgatgtcagaacgtttgagtttgggacctggctcaatttcctgccaattgtgtgacATAAATTGTTGAAAGGCAAATAAGAGTATCAGTATTACATGTGTTCTCGTAATATTTTTGTAAG-TTTTTTTCTACCTTTTTATTCTCCCTACCAGTGCTCTAGGTCAAGTTTATTCATGGAAATACCAGCCATGTCTTCTTAAAATCCTGCTTTGATAAACCGCTCTCCCCAAATTAAACTCCTAAGTGTAATGTTTCAAGTAATAACAAAC s panTro4.chr4 190368362 369 + 193495092 TCCCCTTTACTAAATAAATTGATGCTCTTTT---------------TATCAATGTGTACCTTCATGTCCACCCTCCCTTTTAATACAGTC------------TGTATAGgtaggaggagcccactgtttgatgtcagaacgtttgagtttgggacctggctcaatttcctgccaattgtgtgacATAAATTGTTGAAAGGCAAATAATAGTATCAGTATTACATGTGTTCTCGTAATATTTTTGTAAG-TTTTTTTCTACCTTTTTATTCTCCCTACCAGTGCGCTAGGTCAAGTTTATTCATGGAAATACCAGCCATGTCTTCTTAAAATCCTGCTTTGATAAACCGCTCTCCCCAAATTAAACTCTTAAGTGTAATGTTTCAAGTAATAACAAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195342998 369 + 198332218 TCCCCTTTACTAAATAAATTGATGCTGTTTT---------------TATCAATGTGTACATTCACGTCCACGCTCCCTTTTAATAcagtg------------tgtataggtaggaggagcccactatttgatgtcagaatgtttgagtttgggacctggctcaatttcctgccaattgtgtgacATAAATTGTTGAAAGGCAAATAATATTATCAGTATTACATGTGTTCTCATAATATTTTTGGAAG-TTTTTTTCTACCTTTTTATTCTCCCTACCAGTGCTCTAGTTCAAGTTTATTCATGGAAATACCAGCCATGTCTTCTTAAAATCCTGCTTTGATAAATCACTCTCCCCAAATTAAACTCCTAGGTGTAATGTTTCAAGTAATAACAAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111304868 359 + 115148730 TCCCCTTTACTAAATAAATTGATGCTCTTTT---------------TATCAATGTGTACATTCATGTCCACCCTCCCTTTTG--------------------TGTATAGgtagaaggagcccactatttgatgtcagaacgtttga-tttgggacctggctcaatttcctgccaattgtgtgacATAAATTATTGAAAGGCAAATAATATTATCGGTATTACATGTGTTCTCATAATATTTTTGTAAG--TTTTTTCTACCTTTTTATTCTCCCTACCAGTGCTCTAGGTCAAGTTTATTCATGGAAATACCAGCCATGTCTTCTTAAAATCCTGCTTTGATAAATCGCTCTCCCCAAATTAAACTCCTAGGTGTAATGTTTCAAGTAATAACAAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107075 370 + 184069350 TCCCTTTTACTAAATAAGTTGATGCTCTTTT---------------TATCAGTGTGTACATTCATGTCCACCTTCCCTTTTAATAcagtg------------tgtataggtagaaggagcccaccatttgatgtcagaatgtttgagtttcggatatggctcaatttcctgccaattgtgtgacATAAATTGTTGAAAGGCAAATAATATTATCAGTATTACATGTGTTCTCAAAATACTTTTGTGAGTTTTTTTTCTACCTTTTTATTTTCCCTACCAGTGCTCTAAGTCAAGTTTATTCATGGAAATACCAGCCACGTCTTCTTAAAATCCTGCTTTGATAAATTGCTGTCCCCAAATTAAACTCCTAGGTGTGATGTTTAAAGCAATAACAAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186445274 370 + 189454096 TCCCTTTTACTAAATAAGTTGATGCTCTTTT---------------TATCAGTGTGTACATTCATGTCCACCTTCCCTTTTAATACAGTG------------TGTATAGGTAGAAGGAGCCCACCATTTGATGTCAGAACGTTTGAGTTTCGGATATGGCTCAATTTCCTGCCAATTGTGTGACATAAATTGTTGAAAGGCAAATAATATTATCAGTATTACATGTGTTCTCAAAATACTTTTGTGAGTTTTTTTTCTACCTTTTTATTTTCCCTACCAGTGCTCTAAGTCAAGTTTATTCATGGAAATACCAGCCACGTCTTCTTAAAATCCTGCTTTGATAAATTGCTGTCCCCAAATTAAACTCCTAGGTGTGATGTTTAAAGCAATAACAAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060014 370 + 178775436 TCCCTTTTACTAAATAAGTTGATGCTCTTTT---------------TATCAGTGTGTACATTCATGTCCACCTTCCCTTTTAATACAGTG------------TGTATAGGTAGAAGGAGCCCACCATTTGATGTCAGAACGTTTGAGTTTCGGATACGGCTCAATTTCCTGCCAATTGTGTGACATAAATTGTTGAAAGGCAAATAATATTATCAGTATTACATGTGTTCTCAAAatacttttgtgagttttttttctacctttttattttccctaCCAGTGCTCTAAGTCAAGTTTATTCATGGAAATACCAGCCACGTCTTCTTAAAATCCTGCTTTGATAAATCACTGTCCCCAAATTAAACTCCTAGGTGTGATGTTTAAAGCAATAACAAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901414 370 + 135778131 TCCCTTTTACTAAATAAGTTGATGCTCTTTT---------------TATCAATGCGTACATTCATGTCCACCTTCCCTTTTAATACAGTG------------TGTATAGGTAGAAGGAGCCCACCATTTGATGTCAGAACGTTTGAGTTTCGGATATGGCTCAATTTCCTGCCAATTGTGTGACATAAATTGTTGAAAGGCAAATAATATTATCAGTATTACATGTGTTCTCATAATACTTTTGTAAGATTTTTTCTACCTTTTTTATTTTCCCTACCAGTGCTCTAGGTCAAGTTTATTCATGGAAATACCAGCCACATCTTCTTAAAATCCTGCTTTGATAAATTGCTGTCCCCAAATTAAACTCCTAGGTGTAATGTTTAAAGCAATAACAAAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188288811 367 - 190850796 TCCTTTTTACTAACTAAATTGATGCT-TTTT---------------TATGAGTGTGCACATTCAAGCCCACCTTCCCGTTTCATAcagtg------------tgtacaggtggaaggagccgactattcgatgtcaaaacgttagagtttgggacctgactcaatttcctgccaattgtgtgacATAAATTGTTGAAAGGCAAATAATATTATCGGTATCACGTGTGTTCTCataatatttttataaa--ttttttCTTCCTTTTTATTCTCCCTACCTGTGCTCTAGGTAAAGTTTATTCATGGAAATACCAGACATGTCTTCTTAAAATCCTCCTTTGACAAATCACTTGCTCCCAATCAAACTCCTAGGTGTAATGTTTAAAGTAATAAAAAAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15770395 369 - 59632846 TCCCAACTATTGAATAAA-TGATGCTCTGTTGTCACTTTAAACTCAGACTCATGTGCAAATTCGAATTTATCTCCTATTTTAACACAATGTATATAACATAATATATAGGTAG-AGGAGCCAATAATTTGCAACTGGAACATCTGAGTTTGGGAACTGGTTTAA---CTTGTAAATT-TAGGTGATAAAT--TTGAAGTATGACTAGCATTACTAGTATTACATGTAT--------TATCTCTATAAGTTTTTCTGCTTCCTTTTTATTCTCCCTGTTGGTG-TCTAGGTCA--TCTATTCATGGAAATCCCAGACACGGCTTTGCGAAACACTGCTTTGATAAACTACTTCCCCGGAGCCAAACTCCTTGGTGTGATGC-----GTAAGAAC---- i canFam3.chr16 C 0 C 0 e mm10.chr8 84767025 735 - 129401213 I a score=-2756.000000 s hg38.chr4_KI270785v1_alt 101394 5 + 119912 TACTT s panTro4.chr4 190368731 5 + 193495092 TACTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195343367 5 + 198332218 TACTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305227 5 + 115148730 TACTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107445 2 + 184069350 TA--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186445644 2 + 189454096 TA--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060384 2 + 178775436 TA--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901784 2 + 135778131 TA--- i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15770764 3 - 59632846 TAC-- i canFam3.chr16 C 0 C 0 e mm10.chr8 84767025 735 - 129401213 I e calJac3.chr3 188289178 0 - 190850796 C a score=88972.000000 s hg38.chr4_KI270785v1_alt 101399 54 + 119912 AGGGAATTTATACTTCCTATTATACACGATCCAGACACTTAGAAAGGAAAGATA s panTro4.chr4 190368736 54 + 193495092 AGGGAATTTATACTTCCTATTATACACGATCCAGGCACTTAGAAAGGAAAGATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195343372 54 + 198332218 AGGGAATTTATACTTCCTATTATACACGATCCAGACACTTAGAAAGGAAAGATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305232 54 + 115148730 AGGGAATTTATACTTCCTATTATACACGATCCAGACACTTAGAAAGGAAAGATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107447 33 + 184069350 ---------------------ATGCATGGTCCAGACACTTAGAAAGGAAAGATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186445646 33 + 189454096 ---------------------ATGCATGGTCCAGACACTTAGAAAGGAAAGATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060386 33 + 178775436 ---------------------ATGCATGGTCCAGACACTTAGAAAGGAAAGATA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901786 33 + 135778131 ---------------------ATGCTTGGTCCAGACAGTTAGAAAGGAAAGATG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 2562877 54 + 190850796 AGGGGATTTATGCTTCCTGTTAGACACAGTCCAGACACTTAGAAAGGAAAGATA i calJac3.chr3 n 0 n 0 s canFam3.chr16 15770767 4 - 59632846 -------------------------------------CTTA------------- i canFam3.chr16 C 0 C 0 e mm10.chr8 84767025 735 - 129401213 I a score=101879.000000 s hg38.chr4_KI270785v1_alt 101453 48 + 119912 CGAACAGCTTAAAGGAAAGATACAGTTTAACTACAAACAGCTTACTGT s panTro4.chr4 190368790 48 + 193495092 CGAACAGCTTAAAGGAAAGATACAGTTTAACTACAAACAGCTTACTGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195343426 48 + 198332218 CAAACAGCTTAAAGGAAAGATATAGTTTAATTACAAACAGCTTACAGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305286 48 + 115148730 CAAACAGCTTAAAGAAAAGATACAGTTTAATTACAAACAGCTTACAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107480 46 + 184069350 CAAACAGCTTAAAGGAAAGAT--AGTTTAAATACAAGCAGCTTACAAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186445679 46 + 189454096 CAAACAGCTTAAAGGAAAGAT--AGTTTAAATACAAGCAGCTTACAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060419 46 + 178775436 CAAACAGCTTAAAGGAAAGAT--AGTTTAAATACAAGCAGCTTACAGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901819 46 + 135778131 CAAACAGCTTAAAGGAAAGAT--AGTTTAAATACAAGCAGCTTACAGT i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15770771 0 - 59632846 C e mm10.chr8 84767025 735 - 129401213 I e calJac3.chr3 2562931 0 + 190850796 I a score=1358176.000000 s hg38.chr4_KI270785v1_alt 101501 431 + 119912 TACTTATTCAAATATGTATTTTCAGATCTTCACTTTTCCTCTAAATTCTCTGCTCTCTTCAGATCAAATATCTTCTGAAGCCACCAAAAAACTGTCATAACTTCCCACTCCCACCACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCACAGCCCATGATTACTAACTAACTAGGTAATATTGACCACCAATTTCATTTAACATCTACTTGACACAATCATACTA-TCTAGTGTATTGCCTCATTCATGGTCTAGAAGTCTGAGTTGTCTTATTATTATGTTGATGACTTTGTAACCCCCTGGTTACTGCTTAAAAATGCATGCCTAAGGAAGCCTTCATTCTCTTTGCCTTGGTTTGCTAACACATAAAATGAAGAACGGTGTATTTTTCTACTCATAGGTCTTCATGGGATTTTACAAG s panTro4.chr4 190368838 431 + 193495092 TACTTATTCAAATATGTATTTTCAGATCTTCACTTTTCCTCTAAATTCTCTGCTCTCTTCAGATCAAATATCTTCTGAAGCCACCAAAAAACTGTCATAACTTCCCACTCCCACCACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCACAGCCCATGATTACTAACTAACTAGGTAATATTGACCACCAATTTCATTTAACATCTACTTGACACAATCATACTA-TCTAGTGTATTGCCTTATTCATGGTCTAGAAGTCTGAGTTGTCTTATTATTATGTTGATGACTTTGTAACCCCCTGGTTACTGCTTAAAAATGCATGCCTAAGGAAGCCTTCATTCTCTTTGCCTTGGTTTGCTAACACATAAAATGAAGAACGGTGTATTTTTCTACTCATAGGTCTTCATGGGATTTTACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195343474 427 + 198332218 TACTTATTCAAATATGTATTTTCAGATCTTCACTTTTCCTCTAAATTCTCTGCTCTCTTCAGACCAAGTATCTTCTGAAGCCACCAAAAAACTGTCATAACTTCCCACTCCCACCACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCACAGCCCATGGTT----ACTAACGAGGTAATATTGACCACCAATTTCATTTAACATCTACTTCACACAGTCATACTA-CCTAGCGTATTGCCTCCTTCGTGGTCTAGAAGTCTGAATTGTCTTATTATTATGTTGATGACTTTGTAACCCCCTGGTTACTGCTTAAAAATGCATGCCTAAGGAAGCCTTCTTTCTCTTTGCCTTGGTTTGCTAACACATAAAATGAAGAACGCTGTATTTTTCTACTCATATGTCTTCATGGGATTTTACAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305334 427 + 115148730 TACTTATTCAAATATGTATTTTCAGATCTTCACTTTTCCTCTAAATTCTCTGCTCCCTTCAGACCAAATATCTTCTGAAGCCACCAAAAAACTGTCAAAACTTCCCACTCCCACCACCAACCACCTTCTCCTTGCTTCTTTTATTCCAATATATTATTCACAGCCCATGATT----TCTAACTAGGTAATATTGACCACCAATTTCATTTAACATCTACTTGACACAATCATACTA-CTTAGCGTATTGCCTCATTCCTGGTCTAGAAGTCTGAATTGTCTTATTATTATGTTGATTACTTTGTAACCCCCTAGTTACTGCTTAAAAATGCATGCCTAAGGAAGCCTTCATTCTCTTTGCCTTGGTTTGCTGATACATAAAATGAAGAATGGCGTGTTTTTCTACTCATAGGTCTTCATGGGATTTTACAGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107526 426 + 184069350 TACTTATTTAAATATATATTTTCAGGTCTTCACTTTTCCTCTAAATTCTCTGCTCTCATCAGACCAAATATCTTCTGAAGCCACC-AAAAACTGTCATAACTTCCCGTTCACATGACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCATAGCCCATGATT----ACTAACTAGATAATATTGACCACCAATTTCATTTAATATCTACCGGACACAATCATACTA-CCTAGCATATTGCCTCATTCATGGTCTAGAAATCTGAATTGTATTATTATTATGTTGGTTACTTCGTAACTCCCTGGTTACTGCTTAAAAATATATGCCCAAGGAAGTCTTTATtctcttcgccttggtttgctaatacataaaatgaggaacagtgtatttttctcctcataggtcttcatggaattttacagg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186445725 426 + 189454096 TACTTATTTAAATATATATTTTCAGGTCTTCACTTTTCCTCTAAATTCTCTGCTCTCATCAGACCAAATATCTTCTGAAGCCACC-AAAAACTGTCATAACTTCCCGTTCACATGACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCATAGCCCATGATT----ACTAACTAGATAATATTGACCACCAATTTCATTTAATATCTACCGGACACAATCATACTA-CCTAGCATATTGCCTCATTCATGGTCTAGAAATCTGAATTGTATTATTATTATGTTGGTTACTTCGTAACTCCCTGGTTACTGCTTAAAAATATATGCCCAAGGAAGTCTTTATTCTCTTCGCCTTGGTTTGCTAATACATAAAATGAGGAACAGTGTATTTTTCTCCTCATAGGTCTTCATGGAATTTTACAGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060465 426 + 178775436 TActtatttcaatatatattttcagGTCTTCACTCTTCCTCTAAATTCTCTGCTCTCATCAGACCAAATATCTTCTGAAGCCACC-AAAAACTGTCATAACTTCCCGTTCACATGACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCATAGCCCATGATT----ACTAACTAGATAATATTGACCACCAATTTCATTTAATATCTACCGGACACAATCATACTA-CCTAGCGTATTGCCTCATTCATGGTCTAGAAATCtgaattgtattattattatgttgGTTACTTCGTAACTCCCTGGTTACTGCTTAAAAATATATGCCCAAGGAAGTCTTTATTCTCTTCGCCTTGGTTTGCTAATACATAAAATGAGGAACAGTGTATTTTTCTCCTCATAGGTCTTCACGTAATTTTACAGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132901865 426 + 135778131 TACTTATTTAAATATATTTTTTCAGGTCTTCACTTTTCCTCTAAATTCTCTGCTCTCATCAGACCAAATATCTTCTGAAGCCACC-AAAAACTGTCATAACCTCCCGTTCACACGACCAACCACCTTCTCCTTGCCTCTTTTATTCCAATATATTATTCACAGCCCATGATT----ACTAACTAGATAATATTGACCACCAATATCATTTAATATCTACCGGAAACAATCATACTA-CCTAGCGTATTGCCTCATTCATGGTCTAGAAATCTGAATTGTATTATTATTATGTTGATTACTTCATAACTCCCTGGTTACTGCTTAAAAATATATGCCCAAGGAAGTCTTTATTCTCTTCGCCTTGGTTTGCTAATACATAAAATGAGGAACAGTGTATTTTTCTCCTCATAGGTCTTCATGGAATTTTACAGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188289178 421 - 190850796 TACTTACTCAAATATATATTTTCAGATCTTCACTTTTCCTCTAAATTTTCTGCTCTCCTCAGATCAAATATCTTCTGAAGCCACCAAAAAACTGTCATAAATTCCCACTCACACCACCAACCGCCTTCTCTTTGCCTCTCTTTTTCCAATCTATTATCCATGACCCATGATT----ACTGCCTGGGTAATACTGA----CAATTTCATTTAACATCTACTTGACA---TCCTACTACCCTAGCATATTGCCTCATTCATGGTCTAGAAATCTGAATTGCATTATTATTATGTTTATTACTTTGTAACCCcctggttactgccaaaaaacgtatgcccaaggaagtcttcattctctttgccttggtttgctaatatataaaatgaggaacagcatgtttttctactcacaggTCTTCATGGGATTTTACAGG i calJac3.chr3 C 0 C 0 s canFam3.chr16 15770771 348 - 59632846 TACTTACTCAAAGATATGTTTTCAGATCTTGACTTTTCCTTTAAATTTTCTGCTTCCAGCAGATCTGCTACCTCCTGAACCTAATAAGGGACTACGATAACTTCCCAAATACAC--------------------------------------ACTACTCTCA---------T----ACTAAC-------------CTGTTAATTTCCTTTAATACCTATTTGAAACAATTACACTA-----GGATTTTGGCTTGTTCTTTGTCTAGAGGCCTGAATTGCATTATTATTATGTTTATTATTTTGTAGCCCC-------CTGCTTAACAATTTTTGCCAAAGAAAGACT--ATTTCCTTTGCCTTGGTTTTCTGATACATAAAATGAGGACCGTTGTATTTTTGACTTCACGGATCttt------ttttaaaag i canFam3.chr16 C 0 I 346 e mm10.chr8 84767025 735 - 129401213 I a score=387698.000000 s hg38.chr4_KI270785v1_alt 101932 134 + 119912 TTAATTGAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGACACATATTTAAATATTTGATGGCCAGTttcatttttctcattgttactcttattcatattaagctattattatctttttctCAGCTT--T s panTro4.chr4 190369269 134 + 193495092 TTAATTGAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGACACATATTTAAATATTTGATGGCCAGTTTCATTTTTCTCATTGTTACTCTTATTCATATTAAGCTATTCTTATCTTTTTCTCAGCTT--T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195343901 134 + 198332218 TTAATTAAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGACACATATTTAAATATTTGGTGGCCAGTTTCATTTTTTTCACTGTTACTATTATTCATATCAAGCTATTCTTATCTTTTTCTCAGCTT--T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305761 133 + 115148730 TTAATTAAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGACACATATTTAAATATTTGGTGGCCAGTttcatttttctcattgttactcttattcatattaagctattcttatA-TTTTCTCAGCTT--T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181107952 134 + 184069350 ttaattaaagcattctgaaAGCTTCTTGAATAAAGATTAATAAAGATACGTATTTAAATATTTAGTGACCAGTTTCATTTTTCTCATTGTTACTATTATTCATATCAAGCTATTCTTATCTTTTTCTCAGCTTT-- i rheMac3.chr5 C 0 I 11 s macFas5.chr5 186446151 133 + 189454096 TTAATTAAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGATACGTATTTAAATATTTAGTGACCAGTTTCATTTTTCTCATTGTTACTATTATTCATATCAAGCTATTCTTATCTTTTTCTCAGCTT--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176060891 133 + 178775436 TTAATTAAAGCATTCCGAAAGCTTCTTGAATAAAGATTAATAAagatatgtatttaaatatttggtgaccagtttcatttttctcattgttactATTATTCATATCAAGCTATTCTTATCTTTTTCtcagctt--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902291 134 + 135778131 TTAATTAAAGCATTCTGAAAGCTTCTTGAATAAAGATTAATAAAGATACGTATTTAAATATTTGGTGACCAGTTTCATTTTTCTCATTGTTACTATTATTCATATCAAGCTATTCTTATCTTTTTCTCAGCTT-T- i chlSab2.chr7 C 0 I 11 s calJac3.chr3 188289599 134 - 190850796 CTAACTAAAGCATTCCGAGAGCTTCTTGAACGAAGATTAATAAAGATACATATTTAAATATTTGGTGGCCAGCTTCAGTTTTGTCATTGTTACAATTATTCATATCAAGTTATTCTTATCTTCTTCTCAGCTT--T i calJac3.chr3 C 0 C 0 e canFam3.chr16 15771119 346 - 59632846 I e mm10.chr8 84767025 735 - 129401213 I a score=9677.000000 s hg38.chr4_KI270785v1_alt 102066 6 + 119912 GTAAAA s panTro4.chr4 190369403 6 + 193495092 ATAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344035 6 + 198332218 ATAAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305894 6 + 115148730 ATAAAA i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186446284 5 + 189454096 -TAAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061024 5 + 178775436 -taaaa i papAnu2.chr5 C 0 C 0 s calJac3.chr3 188289733 6 - 190850796 ATAAAA i calJac3.chr3 C 0 C 0 e canFam3.chr16 15771119 346 - 59632846 I e mm10.chr8 84767025 735 - 129401213 I e chlSab2.chr7 132902425 11 + 135778131 I e rheMac3.chr5 181108086 11 + 184069350 I a score=4640.000000 s hg38.chr4_KI270785v1_alt 102072 5 + 119912 CAATT s panTro4.chr4 190369409 5 + 193495092 CAATT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344041 5 + 198332218 CAATT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305900 5 + 115148730 CAATT i nomLeu3.chr7b C 0 C 0 s calJac3.chr3 188289739 5 - 190850796 CAATT i calJac3.chr3 C 0 C 0 e canFam3.chr16 15771119 346 - 59632846 I e mm10.chr8 84767025 735 - 129401213 I e chlSab2.chr7 132902425 11 + 135778131 I e papAnu2.chr5 176061029 0 + 178775436 C e macFas5.chr5 186446289 0 + 189454096 C e rheMac3.chr5 181108086 11 + 184069350 I a score=143137.000000 s hg38.chr4_KI270785v1_alt 102077 304 + 119912 CTggccag---------------------------gcgcggtggctcacgcctgtaatccaagctctttgggaagccgaggtgggcggatcacgagttcaggagatcgagaccatcctggctaacacggtgaaacgccatctctactaaaaatacaaaaaattagccgggcgcggtggcgggcgcctgtagtcccagctactcgggaggttgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaa---------aaaattaaaaaaaaa s panTro4.chr4 190369414 340 + 193495092 CTGGCCAGGCGCGGTGGGTCACACCTGTAATCCATgcgcggtggctcacgcctgtaatccaagctcttagggaagccgaggtgggcagatcactaggtcaggagatcgagaccatcctggctaacacggtgaaacgccatctctactaaaaatacaaaaaattagccgggcgtggtggcggtcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggagcttgcagtgagcagagatcgcgccactgcgctccagcctgggcgacagagggagactccgtctcaaaaaaaaagaaaagaaaagaaaaaagaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344046 304 + 198332218 CTggccag---------------------------gcgcagtggctgacgcctgtaatcccagcactttgggaggctgaggtgggcggatcactaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattacctgggcatggtggcgggcacctgtagtcccagatactcgggaggctgaggcaggagaatggcatgaaaccgggaggcggagcttgcagtgagccaagatcgggccactgcacgccagcctgggtgacagagggagactctgtctcaaaaaa---------aacaaaacaaaacaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111305905 299 + 115148730 CTAgccag---------------------------gcgcggtggctcacgccagtaatccaagctcttagtgaagccgaggtgggcagatcactaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggggtgaacccgggaggcggagcttgcagtgagccgagatcgagccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaa---------aaaaataaaa----- i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15771119 346 - 59632846 I e mm10.chr8 84767025 735 - 129401213 I e calJac3.chr3 188289744 0 - 190850796 C e chlSab2.chr7 132902425 11 + 135778131 I e papAnu2.chr5 176061029 0 + 178775436 C e macFas5.chr5 186446289 0 + 189454096 C e rheMac3.chr5 181108086 11 + 184069350 I a score=132.000000 s hg38.chr4_KI270785v1_alt 102381 2 + 119912 aC s panTro4.chr4 190369754 2 + 193495092 AA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344350 2 + 198332218 aa i ponAbe2.chr4 C 0 C 0 s canFam3.chr16 15771465 2 - 59632846 AT i canFam3.chr16 I 346 C 0 e mm10.chr8 84767025 735 - 129401213 I e calJac3.chr3 188289744 0 - 190850796 C e chlSab2.chr7 132902425 11 + 135778131 I e papAnu2.chr5 176061029 0 + 178775436 C e macFas5.chr5 186446289 0 + 189454096 C e rheMac3.chr5 181108086 11 + 184069350 I e nomLeu3.chr7b 111306204 0 + 115148730 C a score=7538.000000 s hg38.chr4_KI270785v1_alt 102383 7 + 119912 CAATTCT s panTro4.chr4 190369756 7 + 193495092 CAATTCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344352 7 + 198332218 caaTTCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306204 6 + 115148730 -aaTTCT i nomLeu3.chr7b C 0 C 0 s macFas5.chr5 186446289 7 + 189454096 CAATTTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061029 7 + 178775436 taatttg i papAnu2.chr5 C 0 C 0 s canFam3.chr16 15771467 7 - 59632846 CAGTTCA i canFam3.chr16 C 0 C 0 e mm10.chr8 84767025 735 - 129401213 I e calJac3.chr3 188289744 0 - 190850796 C e chlSab2.chr7 132902425 11 + 135778131 I e rheMac3.chr5 181108086 11 + 184069350 I a score=343180.000000 s hg38.chr4_KI270785v1_alt 102390 111 + 119912 TAAATGAAAGGTCGAATTGTGACAAGTGGTCATTGTAG-TACAGATGGAGCAAAAGAAACCCATGCATGATACGTGATTCTTTCCTCCACGAGTGTTTATGTGCGTTTCTTC s panTro4.chr4 190369763 111 + 193495092 TAAATGAAAGGTCGAATTGTGACAAGTGGCCATTGTAG-TACAGATGGAGTAAAAGAAACCCATGCATGATACGTGATTCTTTCCTACACGAGTGTTTACGTGCGTTTCTTC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344359 111 + 198332218 TAAATGAAAGGTCGAATTCTGACAAGTGGCCATTGTAG-TACAGATGGAGTAAAAGAAACCCATGCATGATACGTGATTCTTTCCTACACGAGTGTTTACGTGCGTTTCTTC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306210 111 + 115148730 TAAATGACAGGTCGAATTGTGACAAGTGGCCATTGTAG-TACAGATGGAGTAAAAGAAACCCATGCATGATACGTGATTCTTTCCTACACGACTGTTTACGTGCGTTTCTTC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108097 111 + 184069350 TAAATGAAAGGCCAAATTGTGACCAGTGGCCATTGTAG-TACAGATGGAGTAAAAGGAATCCAGACATGATATGTGATTCTTTCCTACACAGGTGTTTATGCGCATTTCTTA i rheMac3.chr5 I 11 C 0 s macFas5.chr5 186446296 111 + 189454096 TAAATGAAAGGCCAAATTGTGACCAGTGGCCATTGTAG-TACAGATGGAGTAAAAGGAATCCAGACATGATATGTGATTCTTTCCTACACAGGTGTTTATGCGCATTTCTTa i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061036 111 + 178775436 taaatgaaaGGCCAAATTGTGACCAGTGGCCATTGTAG-TACAGATAGAGTAAAAGGAATCCAGACATGATATGTGATTCTTTCCTACACAGGTGTTTATGTGCATTTCTTA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902436 111 + 135778131 TAAATGAAAGGCCAAATTGTGACCAGTGGCCATTGTAG-TACAGATGGATTAAAAGGAATCCAGACATGATATGTGATTCTTTCCTACACAGGTGTTTATGTGCATTTCTTa i chlSab2.chr7 I 11 C 0 s calJac3.chr3 188289744 111 - 190850796 TATACAAAAGTTCAAATTGTGAACAGTGGCCATTGTTG-GACAGATAGAGTAAAAGAAATCCAGGTGTGATACCTGATTCTTTTCTACACAAGTGTTTATGTGCATTTCTTA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15771474 90 - 59632846 TAAATGAAAGGTCAAACTGTGACCAGTTGCCACTGTGGATGTAGAGAGAGTAGAAGAAACACA----------------------CACATACATGTTTCTGTGCACTTCTTA i canFam3.chr16 C 0 C 0 e mm10.chr8 84767025 735 - 129401213 I a score=751867.000000 s hg38.chr4_KI270785v1_alt 102501 229 + 119912 AATAT--------AGGACGGAAGCAAGGAA-AAAGAAAAGGAGAAAAGGAAGCAAAGGAA--------------------------------AGAAATTCTACAAAGCAAATGTTTAAGAATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACGTTGACTCAA-CG-TAGACTATTTCACAATAGAACCATATATGCCCCCAGAAATA-A-T-TTTTTTTT---AATTTAGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA s panTro4.chr4 190369874 229 + 193495092 AATAT--------AGGACGGAAGCAAGGAA-AAAGAAAAGGAGAAAAGGAAACAAAGGAA--------------------------------AGAAATTCTACAAAGCAAATGTTTAAGAATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACGTTGACTCAA-CG-TAGCATATTTCACAATAGAACCATATATGCCCCCAGaaata-a-t-tttttttt---aatttaGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344470 231 + 198332218 AATAT--------aggatggaagcaaggaa-aaagaaaaggagaaaaggaagcaaaggaa--------------------------------agaaATTCTACAAAGCAAATGATTAAGAATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACGTTGACTCAA-CT-TAGAATATTTCACAATAGAACCATATATGCCCCCAGaaatata-tatttttttt---aatttaGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306321 227 + 115148730 AATAT--------aggacggaagcaaggaa-aaagaaaaggagaaaaggaagcaaaggaa--------------------------------agaaATTCTACAAAGCAAATGTTTAAGAG-CTGCTAACACA-------------------------------------------------------------TTTTAATGGAGCTCATT-ACTC-AACGTTGACTCAA-CG-TAGAAGATTTCACAATAGGACCGTATATGCCTCCAGAAATATA-T-ATTTTTTT---AATTTAGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108208 230 + 184069350 AATAT--------aggaaggaaggaaggaa-gaagaaaaggggaaaaggaagcaaaggaa--------------------------------agaaATTCTACAAAGCAAATGTTTAAGCATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACTTTGACTCAA-TG-TAGAATATTTCACAATAGAACCATATATGCCCCCAGAAATA-A-T-TTTTTCTT--AAATTTAGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446407 230 + 189454096 aatat--------aggaaggaaggaaggaa-gaagaaaaggggaaaaggaagcaaaggaa--------------------------------agaaaTTCTACAAAGCAAATGTTTAAGCATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACTTTGACTCAA-TG-TAGAATATTTCACAATAGAACCATATATGCCCCCAGAAATA-A-T-TTTTTCTT--AAATTTAGAGATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061147 231 + 178775436 Aatat--------aggaaggaaggaaggaa-gaagaaaaggggaaaaggaagcaaaggaa--------------------------------agaaattctacaAAGCAAATGTTTAAGAATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACTTTGACTCAA-TG-TAGAATATTTCACAATAGAACCATATATGCccccagaaata-att-tttttctt--aaatttagagATCTAATTGTACCTTTAATACTGG----AAGTGAGTGGAAATA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902547 230 + 135778131 aatat--------aggaaggaaggaaggaa-gaagaaaaggggaaaaggaagcaaaggaa--------------------------------agaaaTTCTACAAAGCAAATGTTTAAGAATCTGCTAACACA-------------------------------------------------------------TTTTAATGAAGCTCATTAACTCAAACTTTGACTCAA-TG-TAGAATATTTCACAATAGAACCATATATGCCCCCAGAAATA-A-T-TTGTTCTT--AAATTTAGAGATCTAATTGTACTTTTAATACTGG----AAGTGAGTGGAAATA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188289855 232 - 190850796 AATAT--------aggaaggaaagaaggaa-aaagaaaaagagaaaaggaagcaaaggaa--------------------------------ATAAATTCTACAAAGCAGGTGTTTAAGAATCTGCTAACAAA-------------------------------------------------------------TTTTGATGAAGCTCATTAACTCAAATTTTGACTCAA-TG-AAGACTATTTCACAAGAGAACCATATATGCCCCTAGAAATC-A-A-TGTTCTTAAAAAAATTAGGGATCGGATTGTACCTTTAGTACTAG----AAGTGAGTGGCAATA i calJac3.chr3 C 0 C 0 s mm10.chr8 84767760 272 - 129401213 aagaa--------agaaagaaagaaagaaagaaagaaagaaagaaagaGAGATAGTGGAA--------------------------------AGAAGTTCCACCAAACAAATGGTTAAGAATCTGCCAACATGCCCACAGACCCAGAAAATCCATAGAAAAGAAGAAGGAAGAAGGCAAGAACATGTTAGCAATTTTTCTTGGTATTTATTTATTCAAACTGGGGGTTAAGGG-TAGAACACTTTACACTAGAGCCATCTGTGCC-CTGGAGACA-G-C-TGTTTTCT--------------------------TTAATATTGGACACAAATGAACAGAGCTA i mm10.chr8 I 735 C 0 s canFam3.chr16 15771564 246 - 59632846 AATATACTaaagaagaaaggaaggaaagaa-ggagggaagaaggaaaggaagaagggaaAAAATAAAACATGAAACGGAAGGGGAAAAAAGGAGAAATTCTGT-AAGTAAATGACTAAGAATTTGCTGCCAAG-------------------------------------------------------------CTTTCATTGAGCTCATTTACTTAAACTTTGATTTAA-AGATAGAATATTTTACAAAAGAACCACCTATGACCCAGAAAACA-A-A---------------------------TTGCATCTTCACTCCTGG----AAGCAAGTGGATAca i canFam3.chr16 C 0 I 468 a score=70525.000000 s hg38.chr4_KI270785v1_alt 102730 23 + 119912 GTGTTG---------CTGTC-GTTTCTAAGTGG s panTro4.chr4 190370103 23 + 193495092 GTGTTG---------CTGTC-ATTTCAAAGTGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344701 24 + 198332218 GTGTTGC--------CTGTC-ATTTTAAAGTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306548 24 + 115148730 GTGTTGC--------CAGTC-GTTTTAAAGTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108438 24 + 184069350 GTGTTGC--------CTGTC-ATTTTAAAGTGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446637 24 + 189454096 GTGTTGC--------CTGTC-ATTTTAAAGTGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061378 24 + 178775436 GTGTTGC--------CTGTC-ATTTTAAAGTGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902777 24 + 135778131 GTGTTGC--------CTGTC-ATTTTAAAGTGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188290087 24 - 190850796 GTGGTGC--------CTGTC-ATTTTAAAGTGG i calJac3.chr3 C 0 I 7 s mm10.chr8 84768032 32 - 129401213 GGGTTACAGTGCTTTTTGTC-TTTTTTAAGGAG i mm10.chr8 C 0 C 0 s canFam3.chr16 15772278 24 - 59632846 --GTGGCT-------CTGTCTGCTTTAACATGG i canFam3.chr16 I 468 C 0 a score=34325.000000 s hg38.chr4_KI270785v1_alt 102753 13 + 119912 CCCCGAGAGGAGA s panTro4.chr4 190370126 13 + 193495092 CCCCGAGAGGAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344725 13 + 198332218 CCCCGATAGGAGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306572 13 + 115148730 CCTGGAGAGGACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108462 13 + 184069350 CCTTGAGAGGAGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446661 13 + 189454096 CCTTGAGAGGAGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061402 13 + 178775436 CCTTGAGAGGAGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902801 13 + 135778131 CCTTGAGAGGAGA i chlSab2.chr7 C 0 C 0 s mm10.chr8 84768064 10 - 129401213 ---TTAAAGGAga i mm10.chr8 C 0 I 1360 s canFam3.chr16 15772302 13 - 59632846 TCTTGAAAGAAAG i canFam3.chr16 C 0 C 0 e calJac3.chr3 188290111 7 - 190850796 I a score=161618.000000 s hg38.chr4_KI270785v1_alt 102766 61 + 119912 AGTAACTTGCAGGCAAGTTACAACATCCAGTTTTTAAAATTTATTTTAAATTTTTTTCATA s panTro4.chr4 190370139 61 + 193495092 AGTAACTTGCAGGCAAGTTACAACATCCAGtttttaaaatttattttaaatttttttCATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344738 61 + 198332218 AGTAACTTGCAGCCAAGTTACAACATCCAAGttttaaaatttattttaaatttttttCATG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111306585 56 + 115148730 AGTAACTTGCAGCCAAGTTACAACATCCAGTTTTTAAAA-----TTTAAGTTTTTTTCATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108475 61 + 184069350 AGCAACTTGCAGCCAAGTTACAACATCCAGtttttaaaatttattttaaatttttttCATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446674 61 + 189454096 AGCAACTTGCAGCCAAGTTACAACATCCAGTTTTTAAAATTTATTTTAAATTTTTTTCATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061415 61 + 178775436 AGTAACTTGCAGCCAAGTTACAAcatccagtttttaaattttattttaaatttttttcata i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902814 61 + 135778131 AGTAACTTGCAGCCAAGTTACAACACCCAGCTTTTAAAATTTATTTTAAATTTTTTTCATA i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15772315 57 - 59632846 AGTAACTTGCAGGCAAGTAACAATATCCAGTTTTTAAAA---ACCTTACTTTTTCTCCTT- i canFam3.chr16 C 0 C 0 e mm10.chr8 84768074 1360 - 129401213 I e calJac3.chr3 188290111 7 - 190850796 I a score=437836.000000 s hg38.chr4_KI270785v1_alt 102827 202 + 119912 TAAGGTGAAGATC-ttttttttattattatactttaagttctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacacgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatatctcctaatgctatccctcccccctccctcccatcccacaacaggccccggtgtgtgatgttccc s panTro4.chr4 190370200 200 + 193495092 TAAGGTGAAGATC-ttttttttattattatactttaagttctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacacgtgccatgttggtgtgctgcacccattaactcgtcatttacattaggtatatctcctaatgctatccctcccccctccctcccatcccacaacaggccc--gtgtgtgatgttccc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195344799 200 + 198332218 TAAGGTGAAGATC-ttttttttattattatactttaagttctagggtacatgtgcacaacatgca-gtttgttacatatgtacacatgtgccatgttggcgtgctgcacccattaactcgtcatttacattaggtatatttcctaatgccatccctcccccctccctccca-cccacaaaaggccccagtgtgtgatgttccc i ponAbe2.chr4 C 0 I 323 s nomLeu3.chr7b 111306641 201 + 115148730 CAAGGTGAAGATCtttttttttattattatactttaagttctagggtacatgtgcacaatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaaatcgtcatttacattaggtatatctcctaatgctgtccctctccccgtc--cccaccccacaacaggccccggtgtgtgatgttccc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108536 200 + 184069350 CAAGGTGAAGA-t-ttttttttattattatactttaagttctagagtatatgtacataacgcccaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactggtcagttacattagatatttctcctaatgctatccctcccgctttcc-cctatcccatgacaggccccggtgtgtgatgttccc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446735 200 + 189454096 CAAGGTGAAGA-t-ttttttttattattatactttaagttctagagtatatgtacataacgcccaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactggtcagttacattagatatttctcctaatgctatccctcccgctttcc-cctatcccatgacaggccccggtgtgtgatgttccc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061476 197 + 178775436 caaggtgaagatt-ttttttttattattatactttaagttctagagtataTGTACATaacgcgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactggtcagttacattagatatttctcctaatgctatccctcccgcttTCC-CCTATCCCat----ggccccggtgtgtgatgttccc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132902875 201 + 135778131 CAAGGTGAAGAAt-ttttttttattattatactttaagttctagagtatatgtacataacgcgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactggtcagttacattagatatttctcctaatgcaatccctcccgctttcc-cctaccccatgacaggccccggtgtgtgatgttccc i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15772372 0 - 59632846 C e mm10.chr8 84768074 1360 - 129401213 I e calJac3.chr3 188290111 7 - 190850796 I a score=32646.000000 s hg38.chr4_KI270785v1_alt 103029 18 + 119912 caccctgtgtccaagtgt s panTro4.chr4 190370400 18 + 193495092 caccctgtgtccaagtgt i panTro4.chr4 C 0 C 0 s nomLeu3.chr7b 111306842 18 + 115148730 ctttctgtgtccaagtgt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108736 18 + 184069350 caccttgtgtccaagtgt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446935 18 + 189454096 caccctgtgtccaagtgt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061673 18 + 178775436 caccctgtgtccaagtgt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132903076 18 + 135778131 caccctgtgtccaagtgt i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15772372 0 - 59632846 C e mm10.chr8 84768074 1360 - 129401213 I e calJac3.chr3 188290111 7 - 190850796 I e ponAbe2.chr4 195344999 323 + 198332218 I a score=3224647.000000 s hg38.chr4_KI270785v1_alt 103047 1366 + 119912 tctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcaatactttgctgagaatgatggtttccagtttcatccatgtccctacaaaggacatgaac---tcgtcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgctggacatttgggttggtttcaagtctttgctattgtgaatagtgccacaataaacatatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttttagttctagatccttgaggaatcaccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcccatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactgatgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgaacattttttcatgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatccttgggccacttgttgatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctggatattagccctttgtcagatgggtagattgcaaaaattttctcccattctgtaggttgtctgttcactctgatgatagt-----------tgcagaagctctttaatttaattagatcctatttgtctattttggcttttgttgccattgcttttggtgttttagtcatggagtcctgaatggtaaagcctaggtcttgaatggtattgccta-gttttcttctggggcttttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataagatgtaaggaagtgatccagtttcagctttgtacatatggctagccagttttcccagcaccatttattaaatagggaatcctttcccca-tttctgtttttgtcaggtttgtcagagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatggtgttttggttactgtagtcttgtagtctagtttgaagtgaggtagcataatgcctccagctttgttcttttggcttaggattgatttggcaatgcgggc-tcttttttggttccatatgaactttaaagtag-ttttttccaattctgtgaagacagtcattggtagcttgatggggatggcattgaatctatcagtta s panTro4.chr4 190370418 1366 + 193495092 tctcattgttcaattcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgatggtttccagtttcatccatgtccctacaaaggacatgaac---tcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggtttcaagtctttgctattgtgaatagtgccacaataaacatatgtgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatcaccacactgtcttccacaatggttgaactagtttacagtcccaccagcagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcttgactttttaatgatcaccattctaactgatgcgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgcacaaatgtcttcttttgagaagtgtctgttcatatccttggcccacttgttgatgtggttgtttcatttcttcttgtaaagtagtttaagttctttatagattctggatattagccctttgtcagatgggtagattgcaaaaaatttctcccattctgtaggttgtctgttcactctgatgatagt-----------tgcagaagctctttaatttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcctgaatggtaaagcctaggtcttgaatggtattgccta-gttttcttccggggcttttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataagatgtaaggaagtgatccagtttcagctttgtacatatggctagccagttttcccagcaccatttattaaataaggaatcctttcccca-tttctgtttttgtcaggtttgtcagagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactgtagtcttgtagtctagtttgaagtgaggtagcataatgcctccagctttgttcttttggcttaggatagatttggcaatgcgggc-tcttttttggttccatatgaactttaaagtag-tttattccaattctgtgaagacagtcattggtagcttgatggggatggcattgaatctatcagtta i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195345322 1368 + 198332218 tctcatagttcaa-tcccacctatgagtgagaacatgcggtgtttggttttttgtccttgcaatagtttgctgagaatgatggtttccag-ttcatccatgtccctacaaaggacatgaactcatcatcattttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgatggacatttgggttggttccaagtctttactattgtgaatagttcctcaataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatgctatttctagttctagatccttgaggaatcaccacactgtcttccacaatggttgaactagtttacagtcccaccagcagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcaagtgtctgttggctgcatgaatgtcatcttttgagaagtgtctgttcatatcctttgcccactttttgatggggttgtttcatttcttcttgtaaattagtttaagttctttatagattctggatattagccctttgtcagatgggtagattgcaaaaattttctcccattctataggttgcctgttcactctgatgatagt-----------tgcagaagctctttaatttaattagaccccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcctgaatggtaatgcctaggtcttgaatggtattgcctaggttttcttctggggcttttatggttttaggtctaacatttaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttgtacatatggctagctagttctcccagcaccatttattaaatagggaatcctttcccca-tttttgtttttgtcaggtttgtcaaagatcagatggttgtcgatgtgtggtattatttctgagggctctgttctgttacattggtctatatgtctgttttggtaccagtaccatgctgttttggttactgtagtcttgtagtatagtttgaagtgaggtagcataatgcctccagctttgttcttttggcttaggattgatttggcaatgcgggc-tcttttttggttccatatgaactttaaagtag-ttttttccaattctgtgaagacagtcattgatagcttgatggggatggcattgaatctatcagtta i ponAbe2.chr4 I 323 C 0 s nomLeu3.chr7b 111306860 1364 + 115148730 tctcattgttcaattcccacctatgagtgagaacatgcggtgtttagttttttgtccctgtgatagtttgccgagaatgatggtttccagcttcatccatgtccctacaaaggacgtgaac---tcatcagtttttatggctgcatagtactccatggcatatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgctgcaataaacatacgtgtgcatgtgtctttatagcagcatgatttatattcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatcaccacactgtcttccacaatggttgaactagtttacagttccaccaacagtgtaaaagtgttcctatttctccacagcctctccagcccctgttgtttcttgactttttaatgatcaccatcctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgttgaacattttttcaagtgtctgttggctgcataaatgtcttcttttgagaagtgtgtgttcatatcctttgcccactttttgatggagttgtttcatttcttcttgtaaattagtttaagttctttacagattctggatattagccctttgtcagatgggtagattgccaaaattttctcccattctgtaggttgcctgttcactctgatgatagt-----------tgcagaagctctttaatttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcct---ttcctatgcctaggtcctgaatggtattgcctaggttttcttctggggcttttatggttttaagtctaacatgtaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccacttattaaatagggaatcctttcccca-tttctgtttttgtcaggtttgtcaaagatcagatggttgtagacgtgtggtattatttctgagggctctgttctgctactttggtctgtatctctgttttggtaccagtaccatgctgttttggttactgtagtcttgtagtgtagtttgaagtgaggtagcataatgcctccagctttgttcttttggcttaggactgatttggcaatgcgggc-tcttttttggttccatatgaactttaaagtag-ttttttccaattctgtgaagaaagtcattggtagcttgttggggatggcattgaatctatcagtta i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181108754 1375 + 184069350 tctcattgttcaaatcccacctatgagtgagaacatgcagtgtttggctttctgttcttgaaatagtttgctcagaatgatggtttctagcttcatccatgtccctacaaaggacacaaac---tcatacctttttatgactgcgtagtattccatggtgtatgtgtgacacattttcttaatcaaatctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtactgcgataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatttccacactgtcttccacattggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtctgttggctgtatgaatgtcttcttttgagaaatgtctgttcatatcctttgcccactttttgatggggttgtttgtttttttcttgtaaatttgtttgagttctttgtaggttctggatattagccctttgtcagatgagtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttaatgagatcccatttgtcaattttggcttttgctgccgttgcttttggtgttttagacatgaagtctt---tgcccatgcctatgtcctgaatggtattgcctaggtttttttgtagggtttttatggttttaggtctaacatttaaatctttaatctatcttgaattgatttctgtg-aaagtgtaatgatgggatccagtttcaactttctacatatggctagccaattttcccagcaccatttattaaatagggaatcctttccccattttttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccatttgtctatatctctgttttggtaccagtaccatgctcttttggttactgtagtcttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttctttttgcttaggattgtttggcaaatgcaggc-ttttttttggttccatatgaactttaaagtag-ttttttccagttctgtgaagaaagtcactgatagcttgatggggatggcattgaatctatcaatta i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186446953 1375 + 189454096 tctcattgttcaaatcccacctatgagtgagaacatgcagtgtttggctttctgttcttgaaatagtttgctcagaatgatggtttctagcttcatccatgtccctacaaaggacacaaac---tcatacctttttatgactgcatagtattccatggtgtatgtgtgacacattttcttaatcaaatctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtactgcgataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttggatatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaatttccacactgtcttccacattggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctttccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcgtgtgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttgacagggttgtttgattttttcttgtaaattagtttaagttctctgtagattctggatattagccctgtgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctgttgactctgatggtagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcct---tgcccatgcctaggtcctgaatggtattgcctaggttttcttctagggtttttatggtattaggtctaacatttaaatctttaatctatcttgaattgatttctgtg-aaagtgtaatgatgggatccagtttcaactttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattttttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccatttgtctatatctctgttttggtaccagtaccatgctcttttggttactgtagtcttgtagtatagtttgaagtcaggtagcgtgatgcctccagctttgttctttttgcttaggattgtttggcaaatgcaggc-ttttttttggttccatatgaactttaaagtag-ttttttccagttctgtgaagaaagtcactgatagcttgatggggatggcattgaatctatcaatta i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176061691 1365 + 178775436 tctcattgttcaaatcccacctatgagtgagaacatgcagtgtttggctttctgttcttgaaatagtttgctcagaatgatggtttctagcttcatccatgtccctacaaaggacacaaac---tcatacctttttatgactgcatagtattccatggtgtatgtgtgacacattttcttaatcaaatctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtactgcgataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttggatatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccttgaggaattgccacactgtcttccacattggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctttccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgcctgttggctgcataaatgtcttcttttgagaagtgtctgttcatattctttgcccactttttgacagggttgtttgattttttcttgtaaattagtttaagttctttgtagattctggatattagccctgtgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatgatagt-----------tgcagaagctgtttagtttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcct---tgcccatgcctaggtcctgaatggtattgcctaggttttcttctagggtttttatggtattaggtctaacatttaaatctttaatctatcttgaattgatttttctg-AAAGTGTAATGatgggatccagtttcaactttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattttttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatatctctgttttggtaccagtaccatgctgttttggttactgtagtctcatagtatagtttgaagtcaggtagcgtgatgcctccagctttgttctttttgcttaggattgtttggcaaatgcaggctttttttttggttccatatgaactttaaagtag-ttttttccagttctgtgaagaaagtcactgatagcttgatggggatggcattgaatctatcaatta i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132903094 1364 + 135778131 tctcattgttcaaatcccacctatgagtgagaacatgcagtgtttggctttctgttcttgaaatagtttgctcagaatgatggtttctagcttcatccatgtccctacaaaggacacaaac---tcatacttttttatggctgcatagtattccatggtgtatatgtgacacattttcttaatcaaatctgtcattgatggacatttgggttggttccaagtctttgctattgtgaatagtactgcaataaacatacatgtgcatgtgtctttatagcagcatgatttataatcctttggatatatacccagtaatgggatggctgggtcatatggtacttctagttctagatccttgaggaattgccacactgtcttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctttccagcacctgttgtttcctgactttttaatgatcaccattctaactggtgtgagatggtatctcattgtggttttgatttgcagttctctgatggccagtgatgctgagcatttttt-atatgtctgttggctgcataaatgtcttcttttgagaagtgtctgttcatatcctttgcccactttttgacagggttgtttgattttttcttgtaaattagtttaagttctttgtagattctggatattagccctgtgtcagatgggtagattgcaaaaattttctcccattctgtaggttgcctgttcactctgatgataat-----------tgcagaagctctttagtttaattagatcccatttgtctattttggcttttgttgccattgcttttggtgttttagtcatgaagtcct---tgcccatgcctaggtcctgaatggtattgcctaggttttcttctagggtttttatggtattaggtctaacatttaaatctttaatctatcttgaattgatttttgtg-aaagtgtaattatgggatccagtttcaactttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccattttttgtttttgtcaggtttatcaaagatcagatggttgtagatgtgtggtattatttctgagggctctgttctgttccattggtctatctctctgttttggtaccagtaccatgctgttttggttactgtagtcttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgttctttttgcttaggattgtttggcaaatgcaggc-ttttttttggttccatatgaaatttaaagtagtttttttccagttctgtgaagaaagtcactgatagcttgatgggaatggcattgaatctatcaatta i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15772372 0 - 59632846 C e mm10.chr8 84768074 1360 - 129401213 I e calJac3.chr3 188290111 7 - 190850796 I a score=3276.000000 s hg38.chr4_KI270785v1_alt 104413 1 + 119912 A s panTro4.chr4 190371784 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195346690 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111308224 1 + 115148730 A i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181110129 1 + 184069350 A i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186448328 1 + 189454096 A i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176063056 1 + 178775436 A i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132904458 1 + 135778131 A i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188290118 1 - 190850796 A i calJac3.chr3 I 7 C 0 e canFam3.chr16 15772372 0 - 59632846 C e mm10.chr8 84768074 1360 - 129401213 I a score=1264249.000000 s hg38.chr4_KI270785v1_alt 104414 368 + 119912 CAAGGTGAAGATCTTTTCTGTGTCTGCCAATAAGTTTTCTTCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTACATATAAATTTCAAATTGAAGGCCCATCAATAGGATTATGTTTGTTTAAATACAAACAGCTTCAGCTTTCCAAGACTTTCTACTCTGGCTCTT-GTGTTAATTGTACTAATGGCTGGTACTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAAG------TTCTATGATTCTATTCA---TAGCAGTTCCTAGTCTGATTAGGTTACCAACATGGATAAGAATCTGAT-AAAAGTTATAAACTGTATTTTCAGT s panTro4.chr4 190371785 368 + 193495092 CAAGGTGAAGATCTTTTCTGTGTCTGCCAATAAGTTTTCTTCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTACATATAAATTTCAAATTGAAGGCCCATCAATAGGATTATGTTTGTTTAAATACAAACAGCTTCAGCTTTCCAAGACTTTCTACTCTGGCTCTT-GTGTTAATTGTACTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAAG------TTCTATGATTCTATTCA---TAGCAGTTCCTAGTCTGATTAGGTTACCAACATGGATAAGAATCTGAT-AAAAGTTATAAACTGTATTTTCAGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195346691 368 + 198332218 CAAGGTGAAGCTCTTTTCTGTGTCTGCTAATAAGTTTTCTTCACCTAGTGACT-GTAAAGGAGTTTAACAGTTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTACATATAAATTTCAAATCGAAGGCCCATCAATAGGATTATGTTTGTTTAAATACAAACAGCTTCAGCTTTCCAAGACTTTCTACTCTAGCTCTT-GTGTTAATTGTGCTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAAG------TTCTATGATTCTATTCA---Tagcagttcttagcctgattaggttaccaacctggataagaatctgat-aaaagctataaactgtattttcagt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111308225 368 + 115148730 CAAGGTGAAGATCTTTTCTGTGTCTGCCAATAAGTTTTCTTCATCTAGTGACT-GTAAAGGAGTTTGACAGTTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTACAAATAAATTTCAAATTGAAAGCCCATCAATAGGATTATGTTTGTTTAAATACAAACAGCTTCAGCTTTCCAAGACTCTCTACTCTAGCTCTT-GTGTTAACTGTGCTAATGGCTGGTAGTCTGTGACTTCTTCATCTCTTTGGTCCTCTGGTTCCTTCTGGAGGTAAAG------TTCTATGATTCTATTCA---TAGCAGTTCTTAGCCTGATTAGGTTACCAACATGGATAAGAATCTGAT-AAAAGTTATAAACTGTATTTTCAGT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181110130 369 + 184069350 CAAGGTGAAGATCTTTTCTGGGTCTGACAATAAGTTTTCTCCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTAGATATAAAGTTCAAATTGAAGGCCCATCAATCGGATCATGTTTGTTTAAACACAAACAGCTTCAGCTTTCCAAGACTTCCTACTCTAGCTCTT-GTGTTAATTTTGCTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAGG------TTCTGTGATTCTATTCA---TAGCAGTTCTTAGCCTGATTGGGTTACCAACATGGATAAGAATCTGATAAAAAGTTATAAACTATATTTTCAGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186448329 369 + 189454096 CAAGGTGAAGATCTTTTCTGGGTCTGACAATAAGTTTTCTCCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTAGATATAAAGTTCAAATTGAAGGCCCATCAATCGGATCATGTTTGTTTAAACACAAACAGCTTCAGCTTTCCAAGACTTCCTACTCTAGCTCTT-GTGTTAATTTTGCTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAGG------TTCTGTGATTCTATTCA---TAGCAGTTCTTAGCCTGATTGGGTTACCAACATGGATAAGAATCTGATAAAAAGTTATAAACTATATTTTCAGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176063057 369 + 178775436 CAAGGTGAAGATCTTTTCTGGGTCTGACAATAAGTTTTCTCCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATAGAAAGTTAGATATAAATTTCAAATTGAAGGCCCATCAATCGGATCATGTTTGTTTAAACACAAACAGCTTCAGCTTTCCAAGACTTCCTACTCTAGCTCTT-GTGTTAATTTTGCTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTctctggttccttctggaggtaAGG------TTCTATGATTCTATTCA---TAGCAGTTCTTAGCCTGATTGGGTTACCAACATGGATAAGAATCTGATAAAAAGTTATAAActatattttcagt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132904459 368 + 135778131 CAAGGTGAAGATCTTTTCTGGGTCTGACAATAAGTTTTCTCCATCTAGTGACT-GTAAAGGAGTTTGACAATTCTCATAAATTGAAAAGTTATTGGGAGATACAAAGTTACATATGAATTTCAAATTGAAGGCCCATCAATCAGATCATGTTTGTTTAAACACAAACAGCTTCAGCTTTCCAAGACTTCCTACTCTAGCTCTT-GTGTTAATTTTGCTAATGGCTGGTAGTGTGTGACTTCTTCATCTCTTTGGTTCTCTGGTTCCTTCTGGAGGTAAGG------TTCTACGATTCTATTCA---TAGCAGTTCTTAGCCTGATTGGGTTACCAACATGGATAAGAATCTGAT-AAAAGTTATAAACTATATTTTCAGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188290119 364 - 190850796 CAAGGTGAAGATCTTTTCTGTGTCTGCCAATAAGTTTTCTTCATCCGGTGACT-GTAAAGGAATTTGACAATTCTCATAAATTG--AAGTTATTGGGAGATACAAAGTGAGATATAAATTTCAAATTGAAAGCCTATCAGTGGGATTAGGTTTGTTTAAATACAAGCAGCTTCAGTTTTCCAAGACTTCCTACTCTAGCTTTTGGTGTTAATTTTGCTAAAGGTTGGTACTGTGTG---TCTTCATCTCTTTGATTCTCTGGTTCCCTCCAGAGGTAAAG------TTCTATGAGTCTATTAA---TAGCAGTTCTTAGCCTGATTGAGTTACCAGCATGGATGAGAATCTGAT-AAAAGTTATGAACTGTATTTTTAGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15772372 366 - 59632846 CAAGATGAAGACCTTTTCTGTGTCTGCCAACAACTTTTCTTTATCTGGTGACCAGTGAAGGAACTTGACAGTTTTCATAAACCGAAAAGTAATTGAGAGAT------------ATAAATTTCAAATTGAAAATCTATAAATACGATTCAATTTGTTTGAGCAAAACCAGCTTCACTTTTTGGAGTCCCTGCACTCTCAACCTT-GTGCTGATCTTGCTAATGTGTGGCAATGTGTCATCTTTTAATCTCTTTGGGTCTCTAGTCCCTTCTGGAGGTGAATCATTCCTTCCACAACTCTATACAATGTAGTGATTCTTAGCCTGGTTGGATAATTGGTTCTTACAAGAATCTGAT-AATAGCTATGACCAGTCTTCCCAAT i canFam3.chr16 C 0 I 497 e mm10.chr8 84768074 1360 - 129401213 I a score=1681622.000000 s hg38.chr4_KI270785v1_alt 104782 586 + 119912 GAAAAGCACAATTTCCTAAAACATATGTGTGTGTGtgatatggtttggctgtgtccccacccaaatctcctcttgaattgcaactcccacaatttctatgtgtccctgggaggaatctggtagga---agtaatagaatcatgggggtggatcttttcttggctgttcttgtgatagtgaataaatctcatgagatctgatggttttaaaaatgagagtttgcctgcacaagctctctctttgcctgccaccattcacgtaagatgtgacttggtcctccttgctttccaccatgattgtgaggcatccccagccatgtggaactgttaagtccaataaacctctttcatttgtaaatttcccagtcttggctatgtctttattagcagtgtgaaaacagactaatatagtaaattggtaccagtagagt-gggtgctgctgaaaagatacctgaaaatgtggaggcaactttggaattgggt-aacaggcagaggctgaaacagtttggagggctcagaagaagacaggaaaatgtggaagagtttggaactccctagagacttgttgaatggctttgaacatgatgctg s panTro4.chr4 190372153 586 + 193495092 GAAAAGCACAATTTCCTAAAACATCTGTGTGTGTAtgatatggtttggctgtgtccccacccaaatctcctcttgaattgcaactcccacaatttctatgtgtccctgggaggaatctggtggga---agtaattgaatcatgggggtggatcttttcttggctgttcttgtgatagtgaataaatctcatgagatctgatggttttaaaaatgagagtttgcctgcacaagctctctctttgcctgccaccattcacgtaagatgtgacttggtcctccttgctttccaccatgattgtgaggcatccccagccatgtggaactgttaagtccaataaacctctttcatttgtaaatttcccagtcttggctatgtctttattagcagtgtgaaaacagactaatatagtaaattggtaccagtagagt-gggtgctgctgaaaagatacctgaaaatgtggaggcaactttggaattgggt-aacaggcagaggttgaaacagtttggagggctcagaagaagacaggaaaatgtggaagagtttgggactccctagagacttgttgaatggctttgaacatgatgctg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195347059 586 + 198332218 gaaaagcacaATTTCCTAAAACATATGTGTGTGTAtgatatggtttggctgtgtccccacccaaatctcctcttgaattgcaactcccaaaatttccatgtgtccctgggaggaacctgatggga---agtaattgaatcatgggggtggatcttttctttgctgttcttgtgatagtgaataaatcttctgagatctgatggctttaaaaatgagagtttgcctgcacaagctctctctttgccttccgccattcacataagatgtaacttgctcctccttgctttccatcatgattatgaggcatccccagccatgtggaactgttaagtccaataaacctctttcatttgtaaatttcccagtcttggctatgtctttattagcagtgtgaaaacagactaatacaGTaaattggtaccagtagagt-gggcgctgctgaaaagatacctgaaaatgtggaagcaactttggaattgggt-aacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtggaagagtttggaactccctagaggctcgttgaatggctttgaccaagatgctg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111308593 586 + 115148730 GAAAAGCACAATTTCCTAAAACATATGTGTGTGTACgatatgatttggctgtgtccgcacccaaatctcctctttaattgcaactcctacaatttccatgtgtccctgggaggaacctgatggga---agtaattgaatcatgggggtggatcttttctttgctgttcttgtgatagtgaataaatctcatgagatctgatggctttaaaaatgagagtttgcctgcacaagctctctctttgcctgccaccattcacataagatgtgacttgctcctccttgctttccactatggttgtgaggcatccccagccatgtggaactgttaagtccaataaacctctttcatttgtaaatttcccagtcttggctatgtctttattagcagtgtgaaaacagactaatacagtaaattggtaccagtagagt-aggcgttgctgaaaagatacccgaaaatgtggaagcaactttggaattaggt-aacaggcagaggttggaacagtttggagggctcagaagaagacaggaaaatgtggaagagtttggaactccctagagacttgttgaatggctttgaccaggatgctg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181110499 579 + 184069350 GAAAATCACAATTTCCTAAAACATATGTGTGTGTAtgatatggtttggctgtgtccccacccaaatctcctcttgaattgtaattcccacaatttccatgtgt-catgggaggaacctggtggga---agtaattcaatcatggggg-ggatcttttctttgctgttcttgtgatagtgaataaatctcatgagatctgatggctttaaaaatgggagtttgcctgcacaag--ttctcattgcctgctgacattcacataagatatgacttgctcctccttgctttccagtatgattgtgaggca---ccatccatgtggaactgttaagtccaa-aaacctctttcgtttgtaaatttcccagtcttggctgtgtctttatcagtagtgtgaaaacagactaatacagtaaattggtaccagtagagtggggtgctgctgaaaagatacctgaaaatgtggaagtgactttggaattgggt-aacaggcagaggctggaacagcttagagggctcagaagaagataggaaaatgtggaagagtttggcactccctagagacttgttgaatagctttgaccaagatgccg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186448698 579 + 189454096 GAAAATCACAATTTCCTAAAACATATGTGTGTGTAtgatatggtttggctgtgtccccacccaaatctcctcttgaattgtaattcccacaatttccatgtgt-catgggaggaacctggtggga---agtaattcaatcatggggg-ggatcttttctttgctgttcttgtgatagtgaataaatctcatgagatctgatggctttaaaaatgggagtttgcctgcacaag--ttctcattgcctgccgacattcacataagatatgacttgctcctccttgctttccagtatgattgtgaggca---ccatccatgtggaactgttaagtccaa-aaacctctttcgtttgtaaatttcccagtcttggctgtgtctttatcagtagtgtgaaaacagactaatacagtaaattggtaccagtagagtggggcgctgctgaaaagatacctgaaaatgtggaagtgactttggaattgggt-aacaggcagaggctggaacagcttagagggctcagaagaagataggaaaatgtggaagagtttggcactccctagagacttgttgaatagctttgaccaagatgccg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176063426 578 + 178775436 aaaaatcACAATTTCctaaaacatatgtgtgtgtatgatatggtttggctgtgtcccca-ccaaatctcctcttgaattgtaattcccacaattcccatgtgt-catgggaggaacctggtggga---agtaattcaatcatggggg-ggatcttttctttgctgttcttgtgatagtgaataaatctcatgagatctgatggctttaaaaatgggagtttgccTGCACAAG--TTCTCATTGCCTGCCAACAttcacataagatgtgacttgctcctccttgctttccactatgattgtgaggca---ccatccatgtggaactgttaagtccaa-AAACCTCTTTcgtttgtaaatttcccagtcttggctgtgtctttatcagtagtgtggaaacagactaatacagtaaattggtaccagtagagtggggcgctgctgaaaagatacctgaaaatgtggaagtgactttggaattgggt-aacaggcaggggCTGGAACAgcttagagggctcagaagaagataggaagatgtggaAGAGTTTGgcactccctagagacttgttgaatagctttgaccaaGATGCCG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132904827 581 + 135778131 GAAAATCACAATTTCCTAAAACATATGTGTGTGTAtgatatggtttggttgtgtccccacccaaatctcctcttgaattgtaattcccacaattcctatgtgt-catgggaggaacctggtggga---agtaattcaatcatgggggcagatcttttctttgctgttcttgtgatagtgaataaatctcatgagatctgatgactttaaaaatgggagtttgcctgcacaag--ttctcattgcctgccgacattcacataagatgtgacttgctcctccttgctttccactatgattgtgaggca---ccatccatgtggaactgttaagtccaataaacctctttcgtttgtaaatttcccagtcttggctgtgtctttatcagtagtgtgaaaacagactaatacagtaaattggtaccagtagagtggggcactgctgaaaagatacctgaaaatgtggaagtgactttggaattgggt-aacaggcagaggctggaacagcttggagggctcagaagaagataggaaaatgtggaagagttttgcactccctagagacttgttgaatagctttgaccaagatgccg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188290483 582 - 190850796 GAAAATCTCAA-TTCCTATAACATATGTGTGTGTTC--tatggtttgggtgtgtccctacccaaatctccccttgaattataacttccacaatctccatgtgt-catgagagcatcctggtgggacgtggtaattgaatcacggggt-gggt-ttttccttgttgttcttgtgatcgtgagtaaatctcacaagatctgatggttttaaaaatgggagtttgcctgcacaagctctctctttgcctgccgccatttgtataagatgcgactggctcctccttactttctgctgtgattgtgaggcatcctcagccatgtggcactgttaagtccaataaatctctttcatttgtcaattgcccagtctcagctatgtctttatcagcagtgtgaa---cgactaatatagtaaattggtaccagtagaaggtggcgctgctgaaaagatacctgaaaatgtggaagtgactttggaattggggaaatagacagaggttggaacagtttggagggctcagaacaagacaggaaaatgtgagagagtttggaactccacagagacttgttgaatggctttgaccaaaatgctg i calJac3.chr3 C 0 I 567 e canFam3.chr16 15772738 497 - 59632846 I e mm10.chr8 84768074 1360 - 129401213 I a score=4901431.000000 s hg38.chr4_KI270785v1_alt 105368 1667 + 119912 ataataatatggacaatgaaatctaggctgaggtggtctcagatggagatgaggaactttttgggaactggagcaaaggtgacacttgttatattttagcaaagagactggcagcattttgcccttgccctagagatttgtagaactttgaacttgagag-------------tatctggcagaaggaatttctaagcagcaaagcatgtaagagatgacttgggtgctgttgaaagcattcagttttataagggaagcagagcataaaagtttggaaattttgcagcttgacaatgcaatagaaaagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggtcttcatggcagccccttccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggcccagggtctccatgctgtgtgcagcctagggacttggtgccctgcatcccaggcactccagccatggctgagaggggccaacgtagagcttgtgctgtgacttcagagggtgggagccccaagccttggcagtttccacatggtgttgagcctgcaagtgcacggaaattaagaattggggtttggaaacctccatctagatttcagaagatgtatggaaatgcctggatgtccaggcagaagtttgctgcaggggcagggccctcatggagaacctctgctaggacaatgcagaagggaaatgtggggttggag-ccccacacagagtccctactggggcaccacctagtggagctgtgagaagagggccatcatcctctggaccccagaatggtagatccactgacagcttgcactgtgcatctggaaaagctgcagacttccaatgccagcccatgaaagcagccaggaggtaggctatgccctgcaaagccacaggggtggagcttcccaagactaggtgaacccaccttttgcctcagcatgacctgggtgtgagacatggagtcaaagggggtcattttggagctttctgatttcacatccctgctggatttcagacttgcgt-ggggccaatggctcctttgttttggccaatttctcccatttggaatggctgttatttacccaatgactgtacccccattgtatctaggaagtaactaacttgcttttgattttacaggctcacaggtgaaagggacttgccttctctcagatgagactttggactgtggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaagg-------------------------catgatgggttttgaaatgtgaggacatgagatttgggaggggtcg-gggCCTAAtgatatgatttgtctgtgtccccacccaaatctcatcttgaattgtaactcccacaattcacatgtgtcattggaggaacctggtgggaggtaattgaatcatgggggctggtctttcctgtgctgttctcatgatagtgaataagtctcacgagatctgatgactttaaaaatgggagtttgactgcacaagctctctctttgcctgccaccatccatgtatgatgtggtttgccttctgccatgattgtgaggcatccccagccatgtggaactgtgagt s panTro4.chr4 190372739 1668 + 193495092 ataataatatggacaatgaaatctaggctgaggtggtctcagatggagatgaggaactttttgggaactggagcaaaggtgacacctgttatattttagcaaagagactggcagcattttgcccttgccctagagatttgtagaactttgaacttgagag-------------tatctggcagaaggaatttctaagcagcaaagcatgtaagagatgacttgggtgctgttgaaagcattcagttttataagggaagcagagcataaaagtttggaaattttgcagcttgacaatgcagtagaaaagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggtcttcatggcagccccttccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggcccagggtctccatgctgtgtgcagcctagggacttggtgccctgcatcccaggcactccagccatggctgagaggggccaacgtagagcttgtgctgtgacttcagagggtgggagccccaagccttggcagtttccacatggtgttgagcctgcaagtgcacagaaattaagaattggggtttggaaacctccacctagatttcagaagatgtatggaaatgcctggatgtccaggcagaagtttgctgcaggggcagggccctcatggagaacctctgctaggacaatgcagaagggaaatgtggggttggag-ccccacacagagtccctactggggcaccacctagtggagctgtgagaagagggccatcatcctctggaccccagaatggtagatccactgacagcttgcactgtgcatctggaaaagctgcagacttccaatgccagcccatgaaagcagccaggaggtaggctataccctgcaaagccacaggggtggagcttcccaagactaggcgaacccaccttttgcctcagcatgacctgggtgtgagacatggagtcaaagggggtcattttggagctttctgatttgacatccctgctggatttcggacttgcgtgggggcctgtagctcctttgttttgagcaatttctcccatttggaacggctgttatttacccaatgactgtacccccattgtatctaggaagtaactaacttgcttttgattttacaggctcacaggtgaaagggacttgccttctctcagatgagactttggactgtggacttttgagttaatgctgaaatgagttaagactttgggggactgttgggaagg-------------------------catgatgggttttgaaatgtgaggacatgagatttgggaggggtcg-gggCCTAAtgatatgatttgtctgtgtccccacccaaatctcatcttgaattgtaactcccacaattcacatgtgtcatgggaggaacctggtgggaggtaattgaatcatgggggctggtctttcctgtgctgttctcatgatagtgaataagtctcatgagatctgatgactttaaaaatgggagtttgactgcacaagctctctctttgcctgccaccatccatgtatgatgtggtttgccttctgccatgattgtgaggcatccccagccacgtggaactgtgagt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195347645 1665 + 198332218 ataataatatggacaatgaaatctaggctgaggtggtctcagatggagatgaggaactttttgggaactggagcaaaggtgacacttgttatattttagcaaagagactggcagcattttacccttgccctagagatttgtggaactttgaacttgagag-------------tatctggcag-aggaatttctaagcagcaaaccatgtaagagatgacttgggtgctgttaaaagcatttggttttataagggaagcagagcataaaagtttggaaattttgcagcttgacaatgcgatagaaaagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcatcaagacaatggggaaaatgtctccagggtatgtcagaggtcttcatggcagccccttccatcacatccttgaagacctaggaggaaaaagtggtttcctgggccaggcccagggtctccatgctgtgtgcagcctagggacttggtgacttgcatcccaggcactccagccatggcagag-ggggccaacatagagcttgtgctgtgactttagagggtggaagccccaagccttggcagtttccacatggtatttagcctgcaagtgcacagaaattaagaattggggtttggaaacctccgcctagatttcagaatatgtatggaaatgtctggatgtccaggcagaagtttgctgcaggggcagggccctcatggagaagctctgctaggacaatgcagaagggaaatgtggggttggag-ccccacacaaagtccctactggggcaccacctagtggagctgtgagaagagggccaccatcctctggaccccagaatagtagatccactgacagcttgcactgcgcacctggaaaagctgcagacttccaatgccagcccatgaaagcagccaggaggtaggctatgccctgcaaagccacaggggtggagcttcccaagactacatgaacccaccttttgcctcagcatgacctgggtgtgagacatggagtcaaaggagatcattttggagctttctgatttgacagccctgctggatttcagacttgctt-ggggcctgtagctcctttgttttggccaatttctcccatttggaatggctgttatttacccaatgcctgtacccctattgtttctaggaagtaactaacttgcttttgattttacaggctcacaggtgaaagggacttgccttctctcagatgagactttggactgtggacttttgagttaatactgaaatgagttaagactttgggggactgttgggaagg-------------------------catgataggttttgaaatgtgaggacatgaaatttgggaggggtcg-gggtggaatgatatgatttgtctgtgtccccacccaaatctcatcttgaattgtaactcccacaattcccatgtgtcatgggaggaacctgttgggaggtaattgaatcatgggggctggtctttcctgtgctgttctcatgatagtgaataagtcccacgagatctgatgactttaaaaacgggagtttgcctgcacaagctctctctttgcctgccaccgtccatgtatgatgtggtttgccttctgccatgattgtgaggcatccccagccacgtggaactgtcagt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111309179 1664 + 115148730 ataataatatggacaatgaaatctaggctggggaggtctcagatggagatgaggaactttttgggaactggagcaaaggtgacacttgttatattttagcaaagagactggcagcattttgccctagccctagagatttgtggaactttgaacttgagag-------------tatctggcagaaggaatttctaagcagcaaagcatgtaagagatgacttgggtgctgttaaaagcattcagttttataagggaagcagagcataaaagtttggaaaatttgcagcttgacaatgcgatagaaaagaaaattccattctctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggtcttcatggcagccccttccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggaccaaggtctcgatgctgtgtgcagcctagggacttggtgccctgcatcccagccactccagccatggctgagaggggccaacgtagagcttgtgctgtgacttcagagggtggaagccccaagccttggcagtttccacatggtgttgagcctgcaagtgcacagaagttaagaattggggtttggaaacctctgcctagatttcagaagatgtatggaaatgcctggatgtctaggcagacgtttgctgcaggggcagggccctcgtggagaacctctgctaggacaatgcagaagggaaatgtggggttggag-ccccacatagagtccctactggggcaccacctagtggagctgtgagaagacggccaccatcctctggaccccagaatggtagatccactgacagcttgcactgtgcacccggaaaggctgcagactttcaatgccagcccatgaaagcagccaggagggaggctatcccctgcaaagccac-ggggtggagcttcccaagactacatgaacccacctcttgcatcagcgtgacctgggtgtgagacatagagtcaaaggaaatcattttggagctttctgatttgactgccctgctggatttttgacttgca--ggggcctgtagctccattgttttggccaatttctcccatttggaatggctgttatttacccaatgcctgtacccccattgtatctaggaagtaactaacttgcttttgattttacaggctcataggtgaaacggacttgccttcgctcagatgagactttggactgtggactattgagttaatgctgaaatgagttatgactttgggggactattgggaagg-------------------------catgatgggttttgaaatgtgaggacatgagatttgggaggggtt--gggcggaatgatatgatttgtctgtgtccccacccaaatctcatcttgaattggaactcccacaattcccatgtgtcgtgggaggaacccggtgggaggtgattgaatcatgggggctggtctttcctgtgctgttctcatgatagtgaataagtctcacgagatctgatgactttaaaaatgggagtttgcctgcacaagctctctctttgcctgctgccatccatgtatgatgtggtttgccttctgccatgattgtgaggcatccccagccacgtggaactgtgagt i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181111078 1656 + 184069350 ataataatatgggcaatgaaatctaggctgcagtggtctcagatggagatgaggaacttgttaggaactggagcaaaggtgactcttactatatttcagcaaagagactggcagcattttgcccttgccctagagatttgtggaactatgaacttgagagagataatttaggatatcagacagaataaatttctaagcagcaaagcatgtaagaggtgacttgggtgctgttaaaggcattcagttttataagggaagcagagtataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggcaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggttttcatggcagcctctcccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggcacagggtcttcatgctgtgtgcagcctagggacttggtgccttgcatcccagccactccagccatggctgaaaggggccaatgtagagcatgtgctgtgacttcagagggtggaagccccaagtcttggcagcttccacatggtgttgagcctgcaagtgcacagaagttaagaatttgggtttggaaacctccgcctagatttcaaaagatgtatggaaatgcctggatgcccaggcaaaagtttgctgcaggggcg----cctcatggagaacctctgctagtacaatacagaagggaaatgtggggttggagcccccacacagagtccctactagggcaccacctagtggagctatgagaagagagccactctcctctggaccccagaatggcagatccactgacagcttgcactgtgcacctggaaaagctgcagactttcaatgccagcccatgaaagcctccaggagggaggctataccatgcaaaaccacaggggtggagctgcccaaaactacgtgaacccacctcttgtgtcagcatgacctagatgtgagacatggagtcaaaggaaatcattttggagctttctgatttgacagtcctgctggattttggacttgcgt-gggac---------------tttggccaatttctcccatttggaacagctgttatttacccaatgcctgtacccccattgtatctaggaagtaactaaattgctttggattttacaggttcataggtgaaagg-----tccttctctcagatgagattttggactgtggac-tttgagttaatgctgaaatgagttaagaatttgggggactgttgggaagg-------------------------catgatttgttttgaaatgtgaggacatgagatttgggagggacca-gggcggaatgatatgatttgtctatgtcaccacccaaatctcatcttgaattgtaacacccacaattcccatgtgtcgtgggaggaacctggtagaaggtaattgaatcatgggggctgatctttcctgtgctgttctcatgatagtgactaagtctcacgagatctgatgactttacaaatgggagtttgcctgcacaagctctctctttgcctgccgctgtccacgtacaacatgatttgccttctgccatgattgtgaggcatctccagccatgtggaactgtgagt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186449277 1660 + 189454096 ataataatatgggcaatgaaatctaggctgcagtggtctcagatggagatgaggaacttgttaggaactggagcaaaggtgactcttactatattttagcaaagagactggcagcattttgcccttgccctagagatttgtggaactatgaacttgagagagataatttaggatatcagacagaataaatttctaagcagcaaagcatgtaagaggtgacttgggtgctgttaaaggcattcagttttataagggaagcagagtataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggttttcatggcagcctctcccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggcacagggtcttcatgctgtgtgcagcctagggacttggtgccttgcatcccagccactccagccatggctgaaaggggccaatgtagagcatgtgctgtgacttcagagggtggaagccccaagtcttggcagcttccacatggtgttgagcctgcaagtgcacagaagttaagaatttgggtttggaaacctccgcctagatttcaaaagatgtatggaaatgcctggatgcccaggcagaagtttgctgcaggggtggggccctcatggagaacctctgctagtacaatacagaagggaaatgtggggttggagcccccacacagagtccctactagggcaccacctagtggagctatgagaagagggccactctcctctggaccccagaatggcagatccactgacagcttgcactgtgcacctggaaaagctgcagactttcaatgccagcccatgaaagcctccaggagggaggctataccatgcaaaaccacaggggtggagctgcccaaaactacgtgaacccacctcttgtgtcagcatgacctagatgtgagacatggagtcaaaggaaatcattttggagctttctgatttgacagtcctgctggattttggacttgcgt-gggac---------------tttggccaatttctcccatttggaacagctgttatttacccaatgcctgtacccccattgtatctaggaagtaactaaattgctttggattttacaggttcataggtgaaagg-----tccttctctcagatgagattttggactgtggac-tttgagttaatgctgaaatgagttaagaatttgggggactgttgggaagg-------------------------catgatttgttttgaaatgtgaggacatgagatttgggagggacca-gggcggaatgatatgatttgtctatgtcaccacccaaatctcatcttgaattgtaacacccacaattcccatgtgtcgtgggaggaacctggtagaaggtaattgaatcatgggggctgatctttcctgtgctgttctcatgatagtgactaagtctcacgagatctgatgactttaaaaatgggagtttgcctgcacaagctctctctttgcctgccgctgtccacgtacaacatgatttgccttctgccatgattgtgaggcatctccagccatgtggaactgtgagt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176064004 1684 + 178775436 ATAATAATATGGGCAATgaaatctaggctgaggtggtctcagatggagatgaggaacttgttaggaactggagcaaaggtgactcttattatattttagcaaagagactggcagcattttgcccttgccctagagatttgtggaactatgaacttgagagagatgatttaggatatcagacagaataaatttctaagcagcaaagcatgtaagaggtgacttgggtgctgttaaaggcattcagttttataagggaagcagagtataaaagtttggaaaatttgcagcctgacaatgtgatagaaaagaaaatcccattttctgaggagaaattcaagccatcTGCAGAAATTTGGGTAAGTAaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggTTTTCATGGCAGCCTCTCTCATCACACCCTTGaagacctaggaggaaaaagtggtttcctgggccaggcacagggtcttcatgctgtgtgcagcctagggacttggtgccttgcatcccagccactccagccatggctgaaaggggccaatgtagagcatgtgctgtgacttcagagggtggaagccccaagtcttggcagcttccacatggtgttgagcctgcaagtgcacagaagttaAGAATTTGGGTTTGgaaacctccgcctagatttcaaaagatgtatggaaatgcctggatgcccaggcagaagtttgctgcaggggtggggccctcatggagaacctctgctagtacaatacagaagggaaatgtggggttggagcccccacacagagtccctactagggcaccacctagtggagctatAAGAAGAGGGCCACTCTCCTCTggaccccagaatggcagatccactgacagcttgcactgtgcacctggaaaagctgcagactttcaatgccagcccatgaaagcctCCAGGAGGGAGGCTATACCATGCGaaaccacaggggtggagctgcccaaaaCTACGTGAACCCACCTCTTGTGTCAgcatgacctagatgtgagacatggagtcaaaggaaatcattttggagctttctGATTTGACagtcctgctggattttggacttgcgt-ggggc---------------tttggccaatttctcccacttggaacGGCTGTTATTTACCCAATGcc-gtacccccattgtatctaggaagtaactaaattgctttggattttacaggttcataggtgaaAGG-----GCCTtctctcagatgagattttggactgtggac-tttgaggtaatgctgaaatgagttaagaatttgggggactgttgggaaggcatgatttgttttgaaatgtgaagacatgatttgttttgaaatgtgaggacatgagatttgggaggggcca-gggtggaatgatatgatttgtctatgtcaccacccaaatctcatcttgaattgtaacacccacaattcccatgtgtcatgggaggaacctggtagaaggtaattgaatcatgggggctgatctttcctgtgctgttctcatgatagtgaataagtctcacgagatctgatgactttaaaaatgggagtttgcctgcacaagctctctctttgcctgccgctgTCCACGTACAACAtgatttgccttctgccatgattgtgaggcatctccagccatgtggaactgtgagt i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132905408 1686 + 135778131 ataataatatgggcaatgaaatctaggctgaggtggtctcagatggagatgaggaacttgttaggaactggagcaaaggtgactcttattatattttagcaaagagactggcagcattttgcccttgccctagagatttgtggaaccatgaacttgagagagatgatttagggtatcagacagaataaattcctaaggagcaaagcatgtaagaggtgacttgggtgctgttaaagacattcagttttataagggaagcagagcataaaagtttggaaaatttgcagcctgacaatgtgatagaagagaaaatcccattttctgaggagaaattcaagccatctgcagaaatttgggtaagtaaccaggagccaaatgttaatcaccaagacaatggggaaaatgtctccagggtatgtcagaggttttcatggcagcctctcccatcacacccttgaagacctaggaggaaaaagtggtttcctgggccaggcacagggttttcatgctgtgtgcagcctagggacttggtgccttgaatcccagccactccagccatggctgaaaggggccaatgtagagcatgtgctgtgacttcagagggtggaagccccaagtcttggcagcttccacatggtgttgagcctgcaagtgcacagaagttaagaatttgggtttggaaacctccacctagatttcaaaagatgtatggaaatgcctggatgcctaggcagaagtttgctgcaggggtggggccctcatggagaacctctgttagtacaatacagaagggaaatgtggggttggagcccccacacagagtccctactagggcaccacctagtggagctatgagaagagggccactctcctctggaccccagaatggcagatccactgacagcttgcactgtgcacctggaaaagctgcagactttcaatgccagcccatgaaagcctccaggagggaggctataccatgcgaagccacagggatggagctgcccaaaactacatgaacccacctcttgtgtcagcatgacctagatgtgagacatggagtcagaggaaatcattttgaagctttctgatttgacagtcctgctggattttggacttgcat-ggggc---------------tttggccagtttttcccatttggaatggctggtatttacccaatgcctgtacccccattgtatctaggaagtaactaaattgctttggattttacaggttcataagtgaaagg-----gccttctctcagatgagactttggactgtggacttttgagttaacgctgaaatgagttaagaatttgggggactgttgggaaggcatgatttgttttgaaatgtgaggacatgatttgttttgcaatgtgaggacatgagatttgggaggagcca-gggcggaatgatatgatttgtctatgtcaccacccaaatctcatcttgaattgtaacacccacaattcccatgtgtcgtgggaggaacctggtagaaggtaattgaatcatgggggctgatctttcctgggctgttctcatgatagtgaataagtctcacgagatctgatgactttaaaaatgggagtttgcctgcacaagctctctctttgcctgccgctgtccacgtacaacatgatttgccttctgccatgattgtgaggcatctccagccatgtggaactgtgagt i chlSab2.chr7 C 0 I 321 s calJac3.chr3 188291632 1648 - 190850796 ataataatatggacaataaaattcaggctgaggtgttctcagatggagatgaggaacttgttgggaactggagcgaaggcgactcttgttatgttttagcaaagagactggcagcattttacccctgccctagagatctgtggaactttgcacttgagagagatgatttaggataactggcggaagaaatttctaagcagcaaagcacgtaagaggcgacctgggtgctgttaaaggtattcagttttataagagaagcagaacataaaagtttggaaaatttgtagcctgacagtgccatagaaaagaaaatcccatttgctgaggagaaattcaagccatctgtagaaatttgcataagttataaggagccaaatgttaatcaccaaaacaatgggggaaa---------------tcggaggtcttcaaggcagcctttcccatcacccccctgaagacctatgaggaaaaagttgttttctgggccaggcccagggtccccatgctgtgtgcagcctagggatttagtga-------ccaagtcact-cagccatggctgaaagagaccaacgtaaagcttgggctgtga-ttcagagggtggaagtcccaagccttggtagcttccacatggtgttgagcctgcaagtgcacagaagttaagatttggggtttaggaacctctgcctagatttcagaagatgtatgaaaatgcctggatgcccaggcagaagtttgctgcaggggcggggccctcatggagaacctctgcttgggcagcgcagaagagaaacttatggttggagcccccacacagagtccctcctggggcaccacctagtggagctgtgagaagagggccactgtcctatggaccccagaatggtagatccactgacagcttgcactgtgcatctggaaaagtcacagacattcaatgtcagcccataaaagcagctgggagagagactgtaccctgcaaagccacagaggtggagccacccaagaccatacaaacccacctcttgcatcagcatgacctggatgggagacatggagtcaaaggagatcattttggagctttcagatttgactgccctgaaggatttttgactggcat-ggggcatgtaactcctttgttttggccaatttctcccatttgg----gctgttatttactcaaggcctgtatccccattgtatctaggaagtaactaacttacttttgattttacaggctcataggtgaaagagacttgccttctctaagatgagactttggactgtagactttcaagttaatgctgaaatgagttaagattttgggggactgttgggaagg-------------------------catgattgattttgaaatgtgacaacatgaggtttgggaggggccaggggtggaatgatatgatgtggctgtgtccacacccaaatctcatctcagattgcaactcctacaattcccatgtgttgtgggaggaacccagtgggaggtaattaaatcgtgggggcaggtttttcctgtgctgttctcataatggtgaataagtctgacaagagctgatgactttacaaacagtagtttgcctgcccaagctctctctttgcctgccaccatccatgtaagatgtgacttgcctttcgccatgattgtgagg------caactgtgtggaactgtgagt i calJac3.chr3 I 567 C 0 e canFam3.chr16 15772738 497 - 59632846 I e mm10.chr8 84768074 1360 - 129401213 I a score=510462.000000 s hg38.chr4_KI270785v1_alt 107035 196 + 119912 ccaataaacctctcttgtttgtaaattacccagttgtgggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------ACTA-----------ATAATATATAATATATT-----------------ATATATAATTATATTTACATTATTACATTAATTATATAAAATTATATTTTCCATAATTTTATTACATTATATACATTACATATATATTTACATTGTATA s panTro4.chr4 190374407 196 + 193495092 ccaataaacctctcttgtttgtaaattacccagttgtgggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------ACTA-----------ATAATAtataatatatt-----------------atatataattatatttacattattacattaattatataaaattatattttccataattttattacattatatacattacatatatatttacattgtatA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195349310 191 + 198332218 ccaataaacctctcttgtttgtaaattacccagtcgtgggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------ACTA-----------ataatatataa-----t-----------------atatataattatatttacattattatattaattatataaaattatattttccataattttattacattatatacattacatatatatttacattgtatA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111310843 192 + 115148730 ccaataaacctcttttgtttgtaaattacccagttgcagatattctttatcagcagcatgaaaacagactaatgca---------------------------------------------------------------ACTA-----------ataatatataatatatt-----------------atatataattatatttacattattat----attatataaaattatattttccataattttatttcattatgtacattacatatatatttacattgtata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181112734 192 + 184069350 ccaataaacctctttcatttgtaaattggccagtcgcaggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------ACTA-----------ATAATAtgtaatatata-----------------atacataattatatttacattattat----attatatagaattacattttccataatgttattacattatatacattacatatatatttacattgtatA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186450937 192 + 189454096 ccaataaacctctttcatttgtaaattggccagtcgcaggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------ACTA-----------ATAATATATAATATATA-----------------ATACATAATTATATTTACATTATTAT----ATTATATAGAATTACATTTTCCATAATGTTATTACATTATATACATTACATATATATTTACATTGTATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176065688 192 + 178775436 ccaataaacctctttcatttgtaaattggCCAGTCGTAGGTattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------acta-----------ataatatataatatata-----------------atacataattatatttacattattat----attatataaaattacattttccataatgttattacattatatacattacatatatatttacattgtata i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132907415 189 + 135778131 ccaataaacctctttcatttgtaaattggccagtcgcaggtattctttatcagcagcatgaaaacagactaataca---------------------------------------------------------------GCTA-----------ataatatataatatata-----------------atacataattatatttac---attat----attatataaaattacattttccatcatgttattacattatatacattacatatatatttacattgtata i chlSab2.chr7 I 321 C 0 s calJac3.chr3 188293280 285 - 190850796 ctaacaaaccactttcatttgtaaattacccaatctcagatattctttatcagta-tatgaaagcagaccaatacaGTGCATGTGTGTGTGTGtatatatatatatatgtatatatatatataaaatagtgtaaatatcattatatatgtgtgtataatatatatcatatataattatatatatacacatatataattatatttacactattatattaattatacaaaattacatttccc-taattttattacattatatatattacacatatatttatattatata i calJac3.chr3 C 0 C 0 e canFam3.chr16 15772738 497 - 59632846 I e mm10.chr8 84768074 1360 - 129401213 I a score=491901.000000 s hg38.chr4_KI270785v1_alt 107231 145 + 119912 TCTATTTTCTTTTAAGCTGCTCAGTGTC----------AA--ACTCATTGCATGAGTTTTAGGGACAATCAATCCTCAGCACCAGCATGGAACCCAGAATCGGCAGAGGCCAATTTGCAGTCTGTGAC---CTGCACAGATAGAATGCTGGCACGTGGCT s panTro4.chr4 190374603 145 + 193495092 TCTATTTTCTTTTAAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTTTTAGGGACAATCAATCCTCAGCACCAGCATGGAACCCAGAATCTGCAGAGGCCAATTTGCAGTCTGTGAC---CTGCACAGATAGAATGCTGGCACGTGGCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195349501 145 + 198332218 TCTATTTTCTTTTAAGCTGTCCAGTGTC----------AA--ACTCATTGCATGAGTTTTTGGGACAATCAATCCTCAGCACCAGCATGGAACCCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGATAGAATGCTGGCACGTGGCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111311035 145 + 115148730 tctattttcttttaAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTTTTTGGGACAATCAATCCTCAGCACCAGCATGGAATGCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGATAGAATGCTGGCATGTGGCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181112926 145 + 184069350 TCTATTTTCTTTTAAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTGTTTGGGACAATCAATCCTCAGCACCAGCATAGAACCCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGACAGAATGCTGGCACGTGGCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186451129 145 + 189454096 TCTATTTTCTTTTAAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTGTTTGGGACAATCAATCCTCAGCACCAGCATAGAACCCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGACAGAATGCTGGCACGTGGCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176065880 145 + 178775436 tctattttcttttaagctGCCCAGTGTC----------AA--ACTCATTGCATGAGTGTTTGGGACAATCAATCCTCAGCACCAGCATAGAACCCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGACAGAATGCTGGCACGGGGCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132907604 145 + 135778131 tctattttcttttaAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTTTTTGGGACAATCAATCCTCAGCACCAGCATAGAACCCAGAATCTGCAGAGGCCCATTTGCAGTCTGTGAC---CTGCACAGACAGAATGCTGGCACATGGCC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188293565 145 - 190850796 catattttattgtaAGCTGCCCAGTGTC----------AA--ACTCATTGCATGAGTTTTTGGGTCAGTCAATCCTCAGCACCAGCATGGAACCCAGAATCTGCAGAGGCTCATTTGCAGTCCATGAG---CTGCACAGATAGAATCCTAGCATGTGGCC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15773235 156 - 59632846 tttcttctctTCCA---TGTTCAGTGTCTCCTGCAGGTAATTACCCATTATGCCAGTTTTTGTAGCAATCAAGCCCCATCAGCAACATGGAACTGAGAGTCCGCATAGTCCCA-CTGCACTCTCTGAGAGACTACATAGATAGAATGCTGGCTTTTACCC i canFam3.chr16 I 497 C 0 e mm10.chr8 84768074 1360 - 129401213 I a score=1649358.000000 s hg38.chr4_KI270785v1_alt 107376 471 + 119912 ----------------TCATCCTGCTTAGTCCCAG--GTCTTGAAACCAGAGTTAGTGTTG------CAAAGAAGTCGGCACAGCTTAGCATTTATTCTCCAGGCATGAGCTGGAGCAGCATTCAAGGTTCTAGGCCAGCAACAGCTGTTTCCAGTGGTGAAATGCCGTGTCCGATAGCAGAGGAGTCTTAACCAGTCTT-GCCTGTGGTATCGTTTTCATTATTGTTTTGAATCGCTGGCCTCCCTTGGTTTTATAACTGATTTCTGGGATACGTAATATATTtccagtaaattcagtgaactatccaatgt---attgttaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaagaagaactctaacACACATAAAGGTAAGGAA--AACATTCCGCCTATAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTCAGCCCA-TCACAGATTCTGCTTGCCTCTCTCAAGCTGA-----TGGGGTTGG s panTro4.chr4 190374748 471 + 193495092 ----------------TCATTCTGCTTAGTCCCAG--GTCTTGAAACCAGAGTTAGTGTTG------CAAAGAAGTCGGCACAGCTTAGCATTTATTCTCCAGGCATGAGCTGGAGCAGCATTCAAGGTTCCAGGCCAGCAACAGCTGTTTCCAGTGGTGAAATGCCGTGTCCGATAGCAGAGGAGTCTTAACCAGTCTT-GCCTGTGGTGTCGTTTTCATTATTGTTTTGAATCGCTGGCCTCACTTGGTTTTATAACTGATTTCTGGGATACGTAATATATTtccagtaaattcagtgaactatccaatgt---attattaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaagaagaactctaacACACATAAAGGTAAGGAA--AACATTCCGCCTATAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCGCA-TCACAGATTCTGCTTGCCTCTCTCAAGCTGA-----TGGGGTTGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195349646 456 + 198332218 ----------------TCATCCTGCTTAGTCCCAG--GTCTTGAAACCAGAGGTAGTGTTG------CAAAGAAGTCGGCACAGCTTAGCATTTATTCTCCAGGCACGAGCTGGAGCAGCATTCAAGGTTCCAGGCCAGCAACAGCTGTTTCCAGTGGTGAAATGCCGTGTCCGCTAGCAGAGGAGTCTTAACCAGTCTT-GCCTGCGGTGTCATTTTCATTATTGTTTTGAATCCCTGGCCTCCCTTGGTTTTATAACTGATTTCTGGGATATATAATATATTtccagtaaattcagtgaactatccaatgt---attattaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaataagaactctaacACACATAAAGGTAAGAAA--AAAATTCTGCCTATAACTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCCG-C---------------CCTCTCTCAATCTGA-----TGGGGTTGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111311180 471 + 115148730 ----------------TCATCCTGCTTAGTCCCAG--GTCTTGAAACCAGAGTTAGTGTTG------CAAAGAAGTTGGCACAGCTTAGCATTTATTCTGCAGGCATGAGCTGGAACAGCATTCAAGGCTCCAGGCCAGCAACAGCTGTTTCCAGAGGTGAAATGCTGTGTCCGCTAGTAGAGGAGTCTTAACCAGGTTT-GCCTGCAGTGTCATTTTCATTATTGTTTTGAATCATTGGCCTCCCTTGGTTTTATAACTGATTTCTGGGATATATGATATATTtccagtaaactcagtgaactatccaatgt---attattaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaataagaactctaacACACATAAAGTTAAGAAA--AAAATTCCGCCTATAACTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCTG-CCACAGATTCTGTTTCCCTCTCTCAATCTGA-----TGGGGTTGG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181113071 468 + 184069350 ----------------TCATCCTGCTTAgtcccgg--gtcttgaaaccacagttagtgttg------caaagaagtcagcacagcttagcgtttattctccaggcatgagcgggagcagcattcaaggttccaggccagcagcagctgtttccagtggtgaaatgccttgtccactagcagaggagtcttaaccagtctc-gcctgtggtgttgttttcattattgttttgaatccctggcctcccttggttttataactgatttctgggatat---atatctttccagtaaattcagtgaactatccaatgt---attattaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaataagaactcGAACCCACATAAAGGTAAGAAA--AAAAATCCACCTATAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCTG-CCATGGATTTTGCTTCCCTCTCTCAATCTGA-----TGGGGTTGG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186451274 468 + 189454096 ----------------TCATCCTGCTTAgtcccgg--gtcttgaaaccacagttagtgttg------caaagaagtcggcacagcttagcgtttattctccaggcatgagcgggagcagcattcaaggttccaggccagcagcagctgtttccagtggtgaaatgccttgtccactagcagaggagtcttaactagtctc-gcctgtggtgtcgttttcattattgttttgaatccctggcctcctttggttttataactgatttctgggatat---atatctttccagtaaattcagtgaactatccaatgt---attattaaattcctttctcacatgaattcaccagaattagtttttgctgtttgcaaataagaactcGAACACACATAAAGGTAAGAAA--AAAAATCCACCTATAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCTG-CCATGGATTTTGCTTCCCTCTCTCAATCTGA-----TGGGGTTGG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176066025 471 + 178775436 ----------------TCATCCTGCTTAGTCCCGG--GTCTTGAAACCACAGTTAGTGTTG------CAAAGAAGTCGGCACAGCTTAGCGTTTATTCTCCAGGCATGAGCGGGAGCAGCATTCAAGGTTCCAGGCCAGCAGCAGCTGTTTCCAGTGGTGAAATGCCTTGTCCACTAGCAGAGGAGTCTTAACCAGTCTC-GCCTGTGGTGTcgttttcattattgttttgaaTCCCTGGCCTCCCTTGGTTTTATAACTGATTTCTGGGATATATAATATCTTTCTAGTAAATTCAGTGAACTATCCAATGT---ATTATTAAATTCCTTTCTCACATGAATTCACCAGAATTAGTTTTTGCTGTTTGCAAATAAGAACTCTAACACAcataaaggtaagaaa--aaaaatccacctatAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCTG-CCGTGGATTTTGCTTCCCTCTCTCAATCTGA-----TGGGGTTGG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132907749 471 + 135778131 ----------------TCATCCTGCTTAgtcccgg--gtcttgaaaccagagttagtgttg------caaagaagtcggcacagcttagcatttattctctaggcatgagcaggagcagcattcaaggttccaggccagcagcagctatttccagtggtgaaatgccgtgtccgctagcagaggagtcttaaccagtctc-gcctgtagtgtcgttttcattattgttttgaatccctggcctcccttggttttataactgatttctgggatatataatatctttccagtaaattcagtgaactatccaatgt---attattaaattcctttctcacatgagttcaccagaattagtttttgctgtttgcaaataagaactctaacACACATAAAGGTAAGAAA--AAAATTCCGCCTATAGCTTCAGTGTTTCAGTGTTTTGATGAGCCCC------TTAAGCCTG-CCATGGATTTTGCTTCCCTCTCTCAATCTGA-----TGGGGTTGG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188293710 466 - 190850796 ----------------TCATCCTGCTTAGTCCCGG--GTCTTGAAACCAGAGCTAGTGTTG------CAAAGAAATAGGCACAGCTTAGCATTTATTCTCCAGGCATGAGCAGGATCAGCATTCAAGGTTCCAGGCCAGCAACAGCTGCTTCCAGTGGTGAAATGCCGCGTCTGCTAGCAGAGGAGTCTTATCCAGTCTT-CCTTGTGGTGTCATTTTCACTGTCATTTTGACTCCCTGGCCTCCCTTGGTTTTATAACTGATTTCTGGGATATATAATATctttccagtaaattcggtgaactattcaatct---attattaaattcctctctcacatgaattcaccagaattggtttttgctgtttgcgaataagaattctgacACACATAAAGTTAAGAAA--AAAATTCTGCCTACAACTTCAGTGTTTCACTGTTTTGATGAGCCTC------TTGAGCCCA-CCATGGATCCTGCCTCCCTCTCTCAATCTGA-----TGGG----- i calJac3.chr3 C 0 C 0 s mm10.chr8 84769434 431 - 129401213 ----------------TCATCCTGCTTAGTCCTGGAAGTTTTGGATCAAGAGCCACCTTTGCTTGGTCAAAGAA------AAAGGTTAGCATT---------------------------GTTCTAG-----AGGCCAGCAACAGCTGTTTCCAGTGGTGGCACACTTTGTCTGCACATCGAGGGGGCCTG---AAGCAC-ACCCTTTGT----TCTTTGCCACTGTTTTGGATTCTTCGATTCTTATGGTTTTATGGCTAATATCTAGGACATGTAATCTCTTTACAG-AAGTTCATCAGGCTACCCAATGT---ACTAGTAAAGT-TTTTCCTGCAGGAGCACACTAGGCTTGGACTCTGC-ATTCATGAACTACAACTGTTGCACATGTAACAGTGGGAAAGTAAGCCTCTGCCTGC--------TATTCCAGTGTTTTGATGAGTCACCTTTGTTTTAGTCAG-C-----ATTCTGCATCCTTCTCTCAGTCAGAGGCCCTGGAGTTGG i mm10.chr8 I 1360 I 950 s canFam3.chr16 15773391 451 - 59632846 TAAGCCCTGCATTGAATCATG-TACCTAGACCTGG--GACTTTGAATC-----------TG------GAGCTAGACCGGGATAACTTTGCATTTATTCTGGAGGCAC-AGTGGGGGCAACATTCAATGTTCCAGATCAGTG---------------GGGGAAGTGTTGTATATTgtagcagtggggtcctaatcagtcccttcctgtggtgtgattttcactatcgttttggatgcttagtgtcccttgtttttataagtgatttctagattct---acattgttctagtaaattcagtgaactatacaatatccgcccagtaaattcctttcctacataagttcaccagaactggtttctgttgtttgcagacaagagtcctaatatacaTAAAGGTGAGAAA--AAAAATCAGCCTATAA--------TTTCAGAATTTTATTGAGTCCC------TTAAACCTATCCATGAATTCTGGCTCC--CTCTCAATCTTG-----TGATATTGG i canFam3.chr16 C 0 C 0 a score=175165.000000 s hg38.chr4_KI270785v1_alt 107847 62 + 119912 TGGTTTTCTGGG-CTGTGAGGGTGAGAGAGTATCTGCAAGGCCTGTGTAAGGACACCTGCTCT s panTro4.chr4 190375219 62 + 193495092 TGGTTTTCTGGG-CTGTGAAGGTGAGAGAGTATCTGCAAGGCCTGTGTAAGGACACCTGCTCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195350102 62 + 198332218 TGGTTTTCCGGG-CTGTGAGGGTGAGAGAGTATCTGCAAGGCCTGGGTAAGGACACTTGCTCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111311651 62 + 115148730 TGGTTTTCCGGG-CTGTGAGGGTGAGAGAGTATCTGCAAGGCCCGGGTAAGGACACCTACTCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181113539 62 + 184069350 TGGTTTTCTGGG-CTGTGAGGGTGGGAGAGTATTTGCAAGTCCTGGGTAAAGACGCCTGCTCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186451742 62 + 189454096 TGGTTTTCTGGG-CTGTGAGGGTGGGAGAGTATTTGCAAGTCCTGGGTAAAGACGCCTGCTCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176066496 62 + 178775436 TAGTTTTCTGGG-CTGTGAGGGTGGGAGAGTATTTGCAAGTCCTGGGTAAAGACGCCTGCTCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132908220 62 + 135778131 TGGTTTTCTGGG-CTGTGAAGGTGGGAGAGTATTTGCAAGTCCTGGGTAAAGACGCCTGCTCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188294176 43 - 190850796 --------------------GGTGGGGGAGTATCTGCAAGGCCTGGGTAAGGATGCCAGCTCT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15773842 53 - 59632846 TGATTTGGGGGGACTGTGGGGATAGGGGAGGGT----------GGGATAAGGATGCTTGCTCT i canFam3.chr16 C 0 C 0 e mm10.chr8 84769865 950 - 129401213 I a score=868602.000000 s hg38.chr4_KI270785v1_alt 107909 324 + 119912 AAAAAGGCGTGAACTggttgggcgcggtggctcacacctgtaatcccagcaatttgggaggccaaggcgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccgagtgcggtggtgggcacctgtaatcccaactacttgggaggctg---aggcaggagaatcgcttgaacccaggaggtggatcttgcagtgagccaagatcgcgccactgcactccagcctgggtgacagagagagagagagactctgtttc---aaaaaaaaaaaaaaaGGTGTG s panTro4.chr4 190375281 319 + 193495092 AAAAAGGCGTGAACTggttgggcacggtggctcacacctgtaatcccagcaatttgggaggccaaggtgggcagatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccgagtgcggtggtgggcacctgtaatcccaactacttgggaggctg---aggcaggagaatcgcttgaacccaggaggtggatcttgcagtgagccaagattgcgccactgcactccagcctgggtgac--agagagagaaagactctgtttc------aaaaaaaaaaaaGGTGTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195350164 320 + 198332218 AAAAAGGCGTGAACCggctgggcacggtggctcacacctgtaatcccagcaatttgggaggccaaggtgggcagatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagccgagtgtggtggtgggcacctgtaatcccagctacttgggaggctg---aggcaggagaatcgcttgaacccaggaggtggatcttgtggtgagccaagatcgcaccactgcactccagcctgggtgac----agagagagagactctgttac---aaaagaaaaaaaaaaGATGTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111311713 318 + 115148730 AAAAAGGCGTGAACCCGTTgggcacggtggctcacacctgtaatcccagcaatttgggaggccaaggtgggcagatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgagtgcagtggcgggcacctgtaatcccagctacttgggaggctg---aggcaggagaatcgcttgaactcaggaggtggatcttgcagtgagccaaaatcacgccactgcactccagcctgggtgac----agagagagagactctgtttc-----aaaaaaaaaaaaaGGTGTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181113601 319 + 184069350 AAAAAGGCATGAACTggctgggcgtggtggctcacacgtgtaattccagcaatttgggaggccaaggtgggctgatcacttgaggtcagtagtgcaagaccagcctggccaacatggtgacacactgtctctactaaaaatacaaaaattagccaggtacagtggtgggcacctgtaatcccagctactcaggaggctg---aggcaggagaatcgcttgtacccaggaggtggaggttgcagtgagctgagactgcgccattacactccagcctgggtgac------agagagagactcagtctc--aaaaaaaaaaaaaaaaGGTGTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186451804 320 + 189454096 AAAAAGGCATGAACTggctgggcgtggtggctcacacctgtaattccagcaatttgggaggccaaggtgggctgatcacttgaggtcaggagtgcaagaccagcctggccaacatggtgacacactgtctctactaaaaatacaaaaattagccaggtacagtggtgggcacctgtaatcccagctactcaggaggctg---aggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagactgcgccattacactccagcctgggtgac------agagagagactcagtctc-aaaaaaaaaaaaaaaaaGGTGTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176066558 320 + 178775436 AAAAAGGCAtgaactggctgggcgtggtggctcacacctgtaattccagcaatttgggaggccaaggtgggctgatcacttgaggtcaggagtgcaagaccagcctggccaacatggtgacacactgtctctactaaaaatacaaaaattagccaggtacagtggtgggcacctgtaatcccagctactcag--agctg---aggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagattgcgccactgcattccagcctgagcaac-----aagagagagactcagtcttcacaaaaaaaaaaaaaagggtgtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132908282 313 + 135778131 AAAAAGGCATGAACTggctgggcgtggtggctcacacctgtaattccagcattttgggaggccaaggtgggctgatcacttgaggtcaggagtgcaagaccagcctggccaacatggtgacacactgtctctactaaaaatacaaaaattagccaggtacagtggtgggcacctgtaatcccagctactcaggaggctg---aggcaggagaatcacttgaacccaggaggtggaggttgcagtgagccgcgattgcgccattgcactccagcctgggtgac----------agagactcagtctc----aaaaaaaaaaaaaaGGTGTG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188294219 299 - 190850796 AAAAAGGTGTGAACTggctaggtgcggtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacttgaggtcaggagtgtgagaccagcttggccaacgtagtaaaaccccgtctctactaaaaatacaaaaattagccagatgtggtggtgggcacctgtaatctcagctactcattgaatagagtaggcagtagaatctcttgaaaccaggaggtggaggctgcagtgagccgtgac-------------------------gac------agagtgagactctgtctcaaaaaaaaaaaaaaaaaGGTTGTG i calJac3.chr3 C 0 C 0 e canFam3.chr16 15773895 0 - 59632846 C e mm10.chr8 84769865 950 - 129401213 I a score=421165.000000 s hg38.chr4_KI270785v1_alt 108233 136 + 119912 AATCTAATTAGTTGTTT-AAAAAACTAGGTGGTGC-AAAGCCTCGATTTTCTGATCGTGCTAATACAAGGT-AAAAGTCATGAGCTGGTGCATATCAATTCTAGAAAGTGAAATTTAATT-AAAAGGATAAAATTTTAAT s panTro4.chr4 190375600 137 + 193495092 AATCTAATTAGTTGTTT-AAAAAACTAGGTGGTGC-AAAGCCTCGATTTTCTGATCGTGTTAATACAAGGT-AAAAGTCATGAGCTGGTGCATATCAATTCTAGAAAGTGaaatttaattaaaaaggataaaattttaat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195350484 136 + 198332218 AACCTAATTAGTTGTTT-AAAAAACTAGG-GGTGC-AAAGCCTCGATTTTCTCATTGTATTAATACAAGGT-AAAAGTCATGAGCTGGTGCATATCAATTTTAGAAAGTGaaatttaattaaaaaggataaaattttaat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312031 130 + 115148730 AACCTAATTAGTTGTTT--AAAATCTAGG-AGTGC-AAAGCCTCGATTTTCTCGTTGTATTAATACAAGGT-AAAAGTCATGAGCTGGTGCATATCAATTCTAGAAAGTGA-----AATTAAAAAGGATAAATTTTTAAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181113920 136 + 184069350 AACCCAATTAGTTGTTT-AAAAAACTAGG-GGTGC-AAAACCTTGATTTTCTCATTATATTAACACAAGGT-AAAAGTCATGAACTGGTGCATATCAATTCTAGAAAGTGAAATTTAATTAAAAAGGATTAAATTTTAAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452124 136 + 189454096 AACCCAATTAGTTGTTT-AAAAAACTAGG-GGTGC-AAAACCTTGATTTTCTCATTATATTAACACAAGGT-AAAAGTCATGAACTGGTGCATATCAATTCTAGAAAGTGAAATTTAATTAAAAAGGATTAAATTTTAAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176066878 136 + 178775436 gACCCAATTAGTTGTTT-AAAAAACTAGG-GGTGC-AAAACCTTGATTTTCTCATTATATTAACACAAGGT-AAAAGTCATGAACTGGTGCATATCAATTCTAGAAagtgaaatttaattaaaaaggattaaattttaat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132908595 136 + 135778131 AACCCAATTAGTTGTTT-AAAAAACTAGG-GGTGC-AAAACCTTGATTTTCTCATTATATTAACACAAGGT-AAAAGTCATGAACTGGTGCATATCAATTCTAGAAAGTGAAATTTAATTAAAAAGGATTAAATTTTAAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188294518 138 - 190850796 AACCCAGTTAGTTATTAAAAAAAACTAGG-GGTGC-AAAACCTCACTTTTCTCATTGTGTTAATACAAGGTAAAAAATCATGAGCTGGTGCATATCAATTCTAGGAAGTGAAATTTAATTAAAAAGGATAAAATTTTAAC i calJac3.chr3 C 0 C 0 s canFam3.chr16 15773895 129 - 59632846 AATCCAGTTAATTGCTA-AAAATATAAGG-GGTCTGAAAGTTTCAATTTTCTCAGCACATTAATATAAGCT---------TGAGCTTATGAGCATTACTCCTAGAAAGCCAAATTTATTTAGGAAGTGTACACTTTTAAT i canFam3.chr16 C 0 C 0 e mm10.chr8 84769865 950 - 129401213 I a score=950395.000000 s hg38.chr4_KI270785v1_alt 108369 346 + 119912 CTCAATTATTTACTTTATTTTTTCAAATTTATTTGCTTCTGttttttttttta----attattatttttaagat-gaggtctcactctctatcacccagctggagtgcagaggcattatctcagcttactgcagcctcgacctcctgggctcaagccattcttccaccctagcctcccaggtagctgggactacaggtgcacaccaccatagctggttaa-tttttgtatttttaatagagctgaggtttcaccatgttgcctaggc---tagtctcaaacttctgagctcaagccatcttcctgcctcagcctcccaaaatgctgggatgacaagcatgggccactgtactcag s panTro4.chr4 190375737 348 + 193495092 ctcaattatttactttattttttcaaatttatttGCTTCTGtttttttttttatt--attattatttttaagat-ggggtctcactctctatcacccagctggagtgcagaggcgttatcttggcttactgcagcctcgacctcctgggctcaagccattcttccaccctagcctcccaggtagctgggactacaggtgcacaccaccatagctggttaa-tttttgtatttttaatagagctgaggtttcaccatgttgcctaggc---tagtctcaaacttctgagctcaagccatctgcctgcctcagcctcccaaaatgctgggatgacaagcatgggccactgtactcag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195350620 345 + 198332218 ctcaatta-----tttattttttcaaatttatttGTTTCTGttttttttttttctaaattattatttttaagat-ggggtctcactctctatcacccagctggagtgcagaggcgttatctcggcttactgcagcctcgacctcctgggctcaagccattcttccaccctagcctcccaagtagctgggactacaggtgcataccaccatagctggttaa-tttttgtatttttaatagagctgaggtttcaccatgttgcctaggc---tggtctcaaacttctgagctcaagccatccacccgcctcagcctccgaaaatgctgggatgacaagcatgggccactgcactcag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312161 337 + 115148730 CTCAATTA---------TTTTTTCAAATTTAtttgtttctgtttttttttaa-----attattatttttaagatgggggtctcactctctatcacccagctggagtgcagaggcgttatctcggcttactgcagcctcgacctcctgggctcaagccattcttccaccctagcctcccaggtagccgggactgcaggtgcacaccaccatagctggttaa-tttttgtatttttaatagagctggggtttcaccatgttgcctaggc---tggtctcaaacttctgagctcaagcagtctgcctgcctcagcctcccaaaatgctgggatgacaagcaggggccactgcactcag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181114056 347 + 184069350 CTCAATTATTTACTTTACTTTTTCAAATTTATTTGTTTCTGTAttcttttt------attattatttttaagat-ggggtctcactctctatcacccagctggagtgcagtggcgttatcttggcttactgcagcctcgatctcctgggctcaagtcattcttccaccctagcctcccaagtagatgggactacaggtgcataccaccatcgctggttaa-tttttgtatttttaacagagctggggtttcaccatgctgcctaggctggtggtctcaaacttctgagctcaagccatccgcccaccttagcctcccaaaatgctggaattacaagcctgggccgctgcattcag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452260 347 + 189454096 CTCAATTATTTACTTTACTTTTTCAAATTTATTTGTTTCTGTAttcttttt------attattatttttaagat-ggggtctcactctctatcacccagctggagtgcagtggcgttatcttggcttactgcagcctcgatctcctgggctcaagtcattcttccaccctagcctcccaagtagatgggactacaggtgcataccaccatcgctggttaa-tttttgtatttttaacagagctggggtttcaccatgctgcctaggctggtggtctcaaacttctgagctcaagccgtccgcccgcctcagcctcccaaaatgctggaattacaagcctgggccgctgcattcag i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176067014 343 + 178775436 ctcaattatttactttactttttcaa----atttgtttctgtattcttttt------attattatttttaagat-ggggtctcactctgtatcgcccagctggagtacagtggtgttatcttggcttactgcagcctcaatctcctgggctcaagtcattcttccaccctagcctcccaagtagatgggactacaggtgcataccaccatcgctggttaa-tttttgtatttttaacagagctggggttttaccatgctgcctaggctggtggtctcaaacttctgagctcaagccgtccgcccgcctcagcctcccaaaatgctggaattacaagcctGGGCCGCTGCATTCAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132908731 343 + 135778131 CTCAATTATTTACTTTACTTTTTCAA----ATTTGTTTCTGTAttcttttt------attattatttttaagat-ggggtctcactctctatcacccagctggagtgcagtggtgttatcttggcttactgcagcctcaatctcctgggctccagtcattcttccaccctagccttccaagtagatgggacgacaggtgcacaccaccatcactagttaa-tttttgtatttttaacagagctggggtttcaccatgctgcctaggctggtggtctcaaacttctgggctcaagccgtccgcctgcctcagcctcccaaaatgctggaattacaagcatgggctgctgcattcag i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188294656 331 - 190850796 CTCAATTATTTAC-TTATTTTTTCAAATTTATTTGTTTCTGAttttttatt----------ttttgtttaagac-aaggtctcattctctgttgtccagctggagtgcagtggtgttacctctgcttattacagccttga---------ctcaagccatcatcccaccctagcttcccaagtagctgggactacaggtgcacaccaccatagctggttaattttttgtattttaaatagagctggggtttcaccatgttgccttggc---tggactgaaacttctgagctcaagccacttgcccacctcagcctcccaaaattctgggattgcaagcatgggacactatactcag i calJac3.chr3 C 0 C 0 e canFam3.chr16 15774024 0 - 59632846 C e mm10.chr8 84769865 950 - 129401213 I a score=651348.000000 s hg38.chr4_KI270785v1_alt 108715 214 + 119912 ccCAATTAGTTACTTTAAAACTTGCTCTTTTCCTCTTATTTTTCAACTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCCAGCAGCGTGCCTGAGAAACTCCTCTTCTATTGTCTG------------------------------------CGAGGGC-TTGC--ATATGAGCTTTCAAT----------TCATCTGAAATAGCAATTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA s panTro4.chr4 190376085 216 + 193495092 ccCAATTAGTTACTTTAAAACTTGCTCTTTTCCTCTTATTTTTCAACTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCCAGCAGCGTGCCTGAGAAACTCCTCTTCTATTGTCTG------------------------------------CGAGGGC-TTGCATATATGAGCTTTCAAT----------TCATCTGAAATAGCAATTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195350965 214 + 198332218 ccCAATTATTTACTTTAAAACTTGCTCTTTTCCTCTTATTTTTCAACTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCTATCAGGGTCCCTGAGAAACTCCTCTTCTATCGTCTG------------------------------------CAAGGGC-TTGC--ATATGAGCTTTCAGT----------TCATCTGAAATAACAATTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312498 212 + 115148730 ccCAATTATTTACTTTAAAATTTGCTCTTTTCCTCTCATTTTTCAACTAATGAACAGGGCAAA--TCTGTCTCCACTACAAAGCTAGTCTAGCAGGGTCCCTGAGAAACTCCCCTTCTGTCGTCTG------------------------------------CAAGGGC-TTGC--ATATGAGCTTTCAAT----------TCATCTGAAATAGCAATTCCCCTCCTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181114403 213 + 184069350 ccCAATTATTTACTATAAAACTTGCTCTTTTCCTTTTATTTCTCTGCTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCCAGCCA-GCCCCTGAGAAACTCCTTTTCCATCGTCTG------------------------------------CAAGGGC-TTGC--GTATGAGCTTTCGAT----------TCATCTGAAATAGCAGTTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452607 213 + 189454096 ccCAATTATTTACTATAAAACTTGCTCTTTTCCTTTTATTTCTCTGCTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCCAGCCA-GTCCCTGAGAAACTCCTTTTCCGTCGTCTG------------------------------------CAAGGGC-TTGC--ATATGAGCTTTTGAT----------TCATCTGAAATACCAGTTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176067357 213 + 178775436 CCcaattatttactttaaaacttgctcttttccttttatttctctgctAATGAACAGGGCAAATCTGTGTCTCCACTACAAAGTCAGTCCAGCCA-GTCCCTGAGAAACTCCTCTTCCGTCGTCTG------------------------------------CAAGGGC-TTGC--ATATGAGCTTTCGAT----------TCATCTGAAATAGCAGTTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909074 213 + 135778131 ccCAATTATTTACTTTAAAACTTGCTCTTTTCCTTTTATTTCTCTGCTAATGAACAGGGCAAATCTCTGTCTCCACTACAAAGTCAATCCAGCCA-GTCCCTGAGAAACTCCTCTTCCGTCGTCTG------------------------------------CAAGGGC-TTGC--ATATGAGCTTTCGAT----------TCATCTGAAATAGCAGTTCCCCTACTGTGAGTGTTTTCATAAAGACTTTCAGAGCAGAAATA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188294987 225 - 190850796 ccCAATTATTTCCTTTAAAACTTGCTCTTTTCCTCCTATTTTTGAATGAATGAACAGGGCAAATCTCTGTCCTCACTGTAAAGTCAGTCTAGTAGAGTCCCTGAGAAACTCCTCCTTTATCCTGTG------------------------------------TAAGGGCTTTGC--ATATGGGCATTCAGTAGGCTCACGCTCATCTGAAATGGCAATTTCCCTACTGTGAGTGTCTTCACAAAGACGTTCAGAGCAGAAATA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15774024 246 - 59632846 CCCAATTATGTACTTTAAATCTAGTTCTTGT-----TATTTTTGAGCTGAGGAACAGGACCAATCTCTGTTCACTGAGCAAGGTTAATCAAGAAAGGTCCTTCATAAATTCTTCTTCTGTAGTATGTACCAAAGAGGTTTTACTAGGGAAAAAAATAAGACACAAGCAC-TTAC--ATATGGGTTTTCAGCGGGCTCACACAGACCTGACTCTACACTTCCCCCAC-ACGAGTCTTTTCATAAAGAATTTCAGAA-------- i canFam3.chr16 C 0 C 0 e mm10.chr8 84769865 950 - 129401213 I a score=56896.000000 s hg38.chr4_KI270785v1_alt 108929 20 + 119912 CAGAGTGCTTTACTATGTTA s panTro4.chr4 190376301 20 + 193495092 CAGAGTGCTTTACTATGTTA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351179 20 + 198332218 CAGACTGCTTTACTATGTTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312710 20 + 115148730 CAGAGTGCTTTACCATGTTA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181114616 20 + 184069350 CAGAGTGCCTTACTATGTCG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452820 20 + 189454096 CAGAGTGCCTTACTATGTCG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176067570 20 + 178775436 CAGAGTGCATTACTATGTCG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909287 20 + 135778131 CAGGGTGCCTTGCTATGTCG i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295212 20 - 190850796 CAGAGTGCTTTGCTTTGCTA i calJac3.chr3 C 0 I 24 s mm10.chr8 84770815 20 - 129401213 CACAGGACCTCACTACATAA i mm10.chr8 I 950 C 0 s canFam3.chr16 15774270 14 - 59632846 ------GTATTAACATGTAA i canFam3.chr16 C 0 C 0 a score=26325.000000 s hg38.chr4_KI270785v1_alt 108949 8 + 119912 GTGTTTCC s panTro4.chr4 190376321 8 + 193495092 GTGTTTCC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351199 8 + 198332218 GTGTTTCC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312730 8 + 115148730 GTGTTTCC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181114636 8 + 184069350 GTGTTTCC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452840 8 + 189454096 GTGTTTCC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176067590 8 + 178775436 GTGTTTCC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909307 8 + 135778131 GTGTTTCC i chlSab2.chr7 C 0 C 0 s mm10.chr8 84770835 8 - 129401213 ATGTTTCC i mm10.chr8 C 0 C 0 s canFam3.chr16 15774284 8 - 59632846 GTTAGTCT i canFam3.chr16 C 0 C 0 e calJac3.chr3 188295232 24 - 190850796 I a score=1585778.000000 s hg38.chr4_KI270785v1_alt 108957 551 + 119912 ACCT----AGTATCTGCCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTAGGAAGTAACAGAGAGCCTCCAGTTGAGTGTCTACATTAACAAATAACGCACCTCCTACATACATGCATGGCCAGTTACACGCAAACAT-TGAATAGATTTTGTTAAAATATCAATGACTGACACTTAGGCTAAGACGATG-AATGGCCAACCAGTGAAATAgtgtgtgtgtatatgtgcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt-----------------------------------------------------------------------------------------TAAGAGAGAAAACTCTTTTCCTCCAAGGTCATTAAGGTCTTTTTTCAAGGTCACGAAGTT---CTAGTAGAACTTATAACA-CACTTC---AGAGGCAATCATTATTACTAAAATTTTAAACAGAAAGAAACTACAAGCAATGGGAAGAAGAAGAAGAAGTGAGTAGGGCAGGTTATATGCTTTCAGAAAATACAGATAAAGGGAAGACAAATCCCAGTTTTCTTGAAGCTCGTTtttatt-ttttttatttttttgagataggg---tctttccctgttgccca s panTro4.chr4 190376329 532 + 193495092 ACCT----AGTATCTGCCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTAGGAAGTAACAGAGAGCCTCCAGTTGAGTGTCTACATTAACAAATAACGCACCTCCTACATATATGCATGGCCAGTTACACGCAAACAT-TGAATAGATTTTGTTAAAATATCAATGACTGACACTTAGGCTAAGACGATG-AATGGCCAACCAGTGAAATAgtgtgtgtgtatatgtgcc------------------tgtgcgtgtgtgtgtgtgtgtgtgtgtgt-----------------------------------------------------------------------------------------TAAGAGAGAAAACTTTTTTCCTCCAAGGTCATTAAGGTCTTTTTTCAAGGTCACGAAGTT---CTAGTAGAACTTATAACA-CACTTC---AGAGGCAATCATTATTACTAAAATTTTAAACAGAAAGAAACTACAAGCAATGGGAAGAAGAAGAAGAAGTGAGTAGGGCAGGTTATATGCTTTCAGAAAATACAGATAAAGGGAAGACAAATCCCAGTTTTCTTGAAGCTCGTtttta-t-ttttttatttttttgagataggg---tctttccctgttgccca i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351207 524 + 198332218 ACCT----AGTATCTGCCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACAGAGAGCCTCCAGTTGAGTGTCTACATTAACAAATAACGCACCTCCTACATATATGAATGGCCAGTTACACGCAAACAT-TGAATAGATTTTGTTAAAATATCAATGACTGACACTTAGGCTAAGACGATG-AATGGCCGACCAGTGAAATAgtgtatgtgta--------------------------tatgtgtgcgtgtgtgtgtgtgtgtgtgt-----------------------------------------------------------------------------------------TAAGAGAGAAAACTTTTTTCCTCCAAGGTCATTAAGGTCTTTTTTCAAGGTAACGAAGTT---CTAGTAGAACTTATAACA-CCCTTC---AGAGGCAATCATTATTACTAAAATTTTAAACAGAAACAAACTACAAGCAATGGGAAGAAGAAGAAGAAGTGAGTAGGGCAGGTTATACGCTTTCAGAAAATACAGATAAAGGGAAGACAAATCCCAGTTTTCTTGAAGCTCATtttta-t-ttttttatttttttgagataggg---tctttccctgttgccca i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111312738 633 + 115148730 ACCT----AGTATCTGCCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACAGAGGGCCTCCAGTTGAGTGTCTACATTAGCAAATAACACACCTCCTACATATATGAATGGCCAGTTACACGCCGACAT-TGAATAGATTTTGTTAAAATATCAATGACTGACCCTTAGGCTAAGACGATG-AATGGCCAACCAGTGAAATAgtgtatgtgtatatgtgcgtgcatgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgcgcgtgtgtgtgcgtgtgtgcacgtgtgtgcacgtgtgtgtgcgcgcgtgtgtgtgcacgtgtgtgtgtgcgcgtgtgtgtgcgtgtgtgcgtgtgtgtgAGAGAGAAAACTTTTTTCCTCCAAGGTC---AAGGTCTTTTTTCAAGGTCACAAAGTT---CTAGTAGAACTTATAACA-CCCTTC---AGAGGCAATCATTATTACTAAAATTTTAAACAGAAAGAAACTACAAGCAATGG---GAACAAGAAGAAGTGAGAAGGGCAGGTTACATGCTTTCAGAAAATGCAGATAAAGGGAAGACAAATCCCAGTTTTCTTGAAGCTCATtttta-t-ttttttatttttttgacaaaggg---tctttcccggttgccca i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181114644 539 + 184069350 ACCT----AGTATCTACCACAAAGACGAGTTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACAGAGAGCCTCCAGGTGAGTGTCTACATTAACAAATAACGCACCTCCTACATATGTGAATAGCCAGTTACACACAAACGT-TGAATAGATTTTGTTAAAGTATCAATGACTGACACTTAGGCTAAGACGATG-AATGGCCAACCAGTGAAATAGCTTAtgtgtatatgtgcgtg----------------tgtgcgtgtgtgcgtgtgtgtgtgtgtAAGAGAG------------------------------------------------------------------------------------AGAGAGAGAAAACTTTTTTCCTCCAAGGTCACTAAGGTCTATTTTCAAGGTCACGAAGTT---CTAGTAGAATTTACAACA-CCCTTC---AGAGGCAATCATTGTTACTAAAATTTTAAACAGAAAGAACCTACAAGCAATGGGATCAAGAAGAGTGAGTGAGTAGGGCAGGTTGTGTGCTTTCAGAAAATACAGATAAAGGGAGGACAAATCCCAGTTTTCTTGAAGCTCtttttaa-t-ttttttatttttttgagataggg---tctttccctgttgccca i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186452848 539 + 189454096 ACCT----AGTATCTACCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACAGAGAGCCTCCAGGTGAGTGTCTACATTAACAAATAACGCACCTCCTACATATGTGAATGGCCAGTTACACACAAACGT-TGAATAGATTTTGTTAAAGTATCAATGACTGACACTTAGGCTAAGACAATG-AATGGCCAACCAGTGAAATAGCGTGTGTGTATAtgtgcgtg----------------tgtgcgtgtgtgcgtgtgtgtgtgtgtAAGAGAG------------------------------------------------------------------------------------AGAGAGAGAAAACTTTTTTCCTCCAAGGTCACTAAGGTCTATTTTCAAGGTCACGAAGTT---CTAGTAGAATTTACAACA-CCCTTC---AGAGGCAATCATTGTTACTAAAATTTTAAACAGAAAGAACCTACAAGCAATGGGATCAAGAAGAGTGAGTGAGTAGGGCAGGTTGTGTGCTTTCAGAAAATACAGATAAAGGGAGGACAAATCCCAGTTTTCTTGAAGCTCtttttaa-t-ttttttatttttttgagataggg---tctttccctgttgccca i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176067598 531 + 178775436 ACCT----AGTATCTACCACAAAGACAAGTTATAAAAATCAGCCTCAGAATGTTTATGAAGTAACAGAGAGCCTCCAGTTGAGTGTCTGCATTAACAAATAATGCACCTCCTACATATGTGAATGGCCAGTTACACACAAACAT-TGAATAGATTTTGTTAAAGTATGAATGACTGACACTTAGGCTAAGACGATG-AATGGCCAACCAGTGAAATAGcgtatgtgtata------------------------tgtgcgtgtgtgcgtgtgtgtgtgtgtaagagag------------------------------------------------------------------------------------agagagagaaaacttttTTCCTCCAAAGTCACTAAGGTCTATTTTCAAGGTCACGAAATT---CTAGTAGAATTTACAACA-CCCTTC---AGAGGCAATCATTGttactaaaattttaaacagaaagaaCCTACAAGCAATGGGATCAAGAAGAGTAAGTGAGTAGGGCAGGTTGTGTGCtttcagaaaatacagataaaggGAGGACAAATCCCAGTTTTCTTGaagctctttttaa-t-ttttttatttttttgagataggg---tctttccctgttgccca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909315 539 + 135778131 ACCT----AGTATCTACCACAAAGACAAGTTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACAGAGAGCCTCCAGTTGAGTGTCTACATTAACAAATAACGCACCTCCTACATATGTGAATGGCCAGTTACACACAAACGt-tgaatagattttgttaaagtatcaatgactgacacttaggctaagatgatg-aatggccaaccagtgaaatagcgtatgtgtatatgtgtgtg----------------tgtgcgtgtgtgcatgtgtgtgtgtgtgtaAGAG------------------------------------------------------------------------------------ACAGAGAGAAAACTTTTTTCCTCCAAGGTCACTAAGGTCTATTTTCAAGGTCACGAAGTT---CTAGTAGAATTTACAACA-CCCTTC---AGAGGCAATCATTATTACTAAAATTTTAAACAGAAAGAACCTACAAGCAATGGGATCAAGAAGAGTAAGTGAGTAGGGCAGGTTGTATGCTTTCAGAAAATACAGATAAAGGGAGGACAAATCCCAGTTTTCTTGAAGCTCtttttaa-t-ttttttatttttttgagataggg---tctttccctgttgccca i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295256 453 - 190850796 ACCT----AGTATCTGCCACAAAGACA--TTATAAAAATCAGCTTCAGAATGTTTATGAAGTAACA----GCCTCCAATTGAGTGTCTACATTAACAAATAATACTCCTCCTACATATATGAATAGCCAGTTACACACAAACAC-TGAATCAATTTTGTTAAAATGTCAAAGACTGACACTTCGGTTA---------------CACCCAGTTTAATGGTCTGTGTG----------------------------TATGTGTGTATGCATGTGTGTG------------------------------------------------------------------------------------------------AAAGAGAGAACAC---TTTCCTCCAAGCTCATTAAAGTCTTTTTTCAAGGTCATGAAGTTCTCCTAGTAGAACTTATGACA-CCCTTC---AGAGGCAATCATTATTATTACAATTTTAAACCGAAAGAAACTACAAGCAGTGGGATCGAGAAG----AGTGAGTAGGATAGGTTATGTGCTTTCAGAATATACGGATAAACGGAAGGCAAATCTCAGCTTTCTTAAAGCT-------A-T-CTAtttatt---------------------------------- i calJac3.chr3 I 24 C 0 s mm10.chr8 84770843 448 - 129401213 --TT----CTCATTTTCCGTACAAAGAAGTTAGAGAAACCATCCTCAGAACATTTACTCAGGAAGAGATGGTCTATAA-----TATCTATGTC------TAACGAGTCTTTTACATA--TCAATAGCTGGTTATCTACAAATGTGTGCATG---TTCTTTGGAATACTGATAAGTGATACTTGAGCTACAAAGATGAAATTGCCAGGCAGTGAGGTAATGAATAT---------------------------------------------------------------------------------------------------------------------------------------------------GAAAACATGCAATTTTTTCCCTTCAAGGTCATCAAGGTCTTTCATCAAGGTCATAAGGTT---CTAGTTGAGC----AACT-CACCTTGTGAGAGAAAATTACC---------ATTTTAAATAGAAAATCATTAGAAACTGTGGGACCAAAG------GGTGAGCCAGACAGATGTTATGTTTTCAAAAATTGAAAACCA--------TAAATCTCAGCTtt--------tcttttttg-tattaattatatatctagatcacagttttctctccctcctctcca i mm10.chr8 C 0 I 1274 s canFam3.chr16 15774292 437 - 59632846 ACCTGTAGAATATATTCTACAAAGACAAGTTATACAAATCAATCTGAGCATGTTTACAGAGT-ACAGATGGGCTGCTGTTGAATATCTA-GTTAAAGTATAACCAGCCTGTTACATATCTGAAACACCAGCTATGCACAAACAT-TGCATAGATTTTGTTAAAATATAAATTATTGACATTTGGGCTAAGAAGATG-AAT------------AAGCAAtgtgtgtgtgtgtgtgtg------------------tgtgagagagagagagagagagagagagagagag------------------------------------------------------------------------------------agagagagagaAC---TTTTCTCCAAAGTCATCAAGCTCTC----------------------CTAGCAGGActtatagcagcccttg---tgaggtaattattatcattaaaattgtaaacacaaagaaactagaaagtatgggatccaga-cagtaagtgagctgggcaggtgacatgacttcagaaaacggggacagagggaaaacaaa------------------------------------------------------------------------- i canFam3.chr16 C 0 C 0 a score=93682.000000 s hg38.chr4_KI270785v1_alt 109508 33 + 119912 ggctggattgagatggcgtctctccctgttgcc s panTro4.chr4 190376861 33 + 193495092 ggctggattgagatggcgtctatccctgttgcc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351731 33 + 198332218 ggctggattgagatggtgtctctccctgttgcc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111313371 33 + 115148730 ggctggattgagatggcatctctccctgttgcc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181115183 33 + 184069350 ggctggattgagatggcgtctcgccctgttgcc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186453387 33 + 189454096 ggctggattgagatggcgtctcgccctgttgcc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176068129 33 + 178775436 ggctggattgagatggcatctcgccctgttgcc i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909854 33 + 135778131 ggctggattgagatggcgtctcgccctgttgcc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295709 26 - 190850796 -------tagagatagggtctcgccctgttgcc i calJac3.chr3 C 0 C 0 s canFam3.chr16 15774729 9 - 59632846 ------------------------cctgtttcc i canFam3.chr16 C 0 C 0 e mm10.chr8 84771291 1274 - 129401213 I a score=530565.000000 s hg38.chr4_KI270785v1_alt 109541 174 + 119912 caggctggagagcagtggcacaatcttggctcactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcatgcaccaccacacctggctaatttttgtatttttctgtagaagcagagtcttcctgtgttgcccaagctg s panTro4.chr4 190376894 174 + 193495092 caggctggacagcagtggcacaatcttggctcactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcatgcaccaccacacctggctaatttttgtatttttctgtagaagtagagtcttcctgtgttgcccaagctg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351764 171 + 198332218 caggctggagagcagtggcacaatcttggctcactgtaacatctgcctcccaggctcaggtgat-ctccgacctcagcctctcaagtagctgggattacaggcatgcaccaccatgcccagctaatttttgtatttttctgtagaagc--agtcttcctgtgttgcccaagctg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111313404 174 + 115148730 caggctggagagcagtggcacaatcttgacttactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcatgcaccaccacacctggctaatttttgcatttttctgtagaagcagagtcttcctgtgttgcccaagccg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181115216 174 + 184069350 cagactggagtgcagtggcacaatcttggctcactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcacgcaccaccatgcccggctaatttttgtctttttttgtagaagcagagtcttcctgtgttgcccaagctg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186453420 174 + 189454096 cagactggagtgcagtggcacaatcttggctcactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcacgcaccaccatgcccggctaatttttgtctttttttgtagaagcagagtcttcctgtgttgcccaagctg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176068162 174 + 178775436 cagactggagtgcagtggcacaatcttggctcactgcaacatctgcctcccaggcacaggtgatcctccgacctcaccctctcaagtagctgggattacaggcacgcaccaccacgcccggctaatttttgtctttttttgtagaagcagagtcttcctgtgttgcccaagctg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132909887 174 + 135778131 cagactggagtgcagtggcacaatcttggctcactgcaacatctgcctcccaggctcaggtgatcctccgacctcagcctctcaagtagctgggattacaggcacgcaccaccacgcccggctaatttttgtctttttttgtagaagcagagtcttcctgtgttgcccaagctg i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295735 173 - 190850796 caggctgcagtgcattggca-aatcgtggctcactgcagcatctgcctcccaggcccaggggatcccccaacctcagcctctcaagtggctggtgttacaggcacgcgccaccacgcccggctaacttttgtgttcttttgtagaggcagagtctttctgtgttgcccaagccg i calJac3.chr3 C 0 C 0 e canFam3.chr16 15774738 0 - 59632846 C e mm10.chr8 84771291 1274 - 129401213 I a score=28162.000000 s hg38.chr4_KI270785v1_alt 109715 8 + 119912 ttgaa-ctc s panTro4.chr4 190377068 8 + 193495092 ttgaa-ctc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351935 8 + 198332218 ttgaa-ctc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111313578 8 + 115148730 ttgaa-ctc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181115390 8 + 184069350 ttgaa-ctc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186453594 8 + 189454096 ttgaa-ctc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176068336 8 + 178775436 ttgaA-CTC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132910061 8 + 135778131 ttgaa-ctc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295908 9 - 190850796 ttgaacccc i calJac3.chr3 C 0 C 0 s canFam3.chr16 15774738 8 - 59632846 ttgaa-ccc i canFam3.chr16 C 0 C 0 e mm10.chr8 84771291 1274 - 129401213 I a score=3037043.000000 s hg38.chr4_KI270785v1_alt 109723 813 + 119912 ctTTTATGCTTTCTCTTGTTTTGATTATATAATCTCTTTCTAGACAGTTCAAATAAAGTTTGAAAGTAGGTTTTTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAACATGGAGACAAA--------ACG--------CTATGTCGTTTATTTATTAAGATCTGTTGTTTT-CCCTCATCTTTTGTAGT--AGCTAACCACAG-------------TATCACCTCTCCCGTATTTA--CTATACTCTTTGCCTGTAGCCAGCAAAGTAACATC-CACAGAGGCAGTGAGAGAATGCTTCTTATGTGAGTCTTAGAATTATTTATTCTGGATAGAATTTGTTTTTAATGTTTATGGAAGTGTCCAAAGTAGAATCTATTCCCCAGGTAGGCATTAGGTACAGCAG---------------------------------AAAAGACACTT-CCACTCAGGCAGGTGCTgaaagataatctccgtgacaaagtgattctccatgagaattgagtctttagtttctctgctgtcaggggagttgttgatggccatttacactttttgtataatgaggacacctgtttgctaataattgaactgaggatatcaCAACACAGGGCGTTTA-AAAATAACATGGGAATACAATTGCAGATTACATACACACATGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATGGCTACGTATTTCCTAAGTAGCTAAATCGAGTTACAGATTT-TGTAGTATTTATTGCATTTCATTTTAATAAGCAGTTATTATAGTTGAA----TAATTACTTCATCACAGGTGTAACAGATACCACAGGGGTGACATCAGTGA-AAGTGCTTTATCACTGCTTTTCCTGTGCCATGGGGTAATAA s panTro4.chr4 190377076 813 + 193495092 ttTTTATGCTTTCTCTTGTTTTGATTATATAATCTCTTTCTAGACAGTTCAAATAAAGTTCGAAAGTAGGTTTTTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAACATGGAGACAAA--------ATG--------CTATGTTGTTTATTTATTAAGATCTGTTGTTTT-CCCCCATCTTTTGTAGT--AGCTAACCACAG-------------TATCACCTCTCCCGTATTTA--CTATACTCTTTGCCTGTAGCCAGCAAAGTAACATC-CGCAGAGGCAGTGAGAGAATGCTTCTTATGTGAGTCTTAGAATTATTTATTCTGGATAGAATTTGTTTTTAATGTTTATGGAAGTCTCCAAAGTAGAATCTATTCCCCAGGTAGGCATTAGGTACAGCAG---------------------------------AAAAGACACTT-CCACTCAGGCGGGTGCTgaaagataatctccgtgacaaagtgattctccatgagaattgagtctttagtttctctgctgtcaggggagttgttgatggccatttacactttttgtataatgaggacacctgtttgctaataactgaactgaggatatcaCAACACAGGGCGTTTA-AAAATAACATGGGAATACAATTGCAGATTACATATACACATGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATGGCTACGTATTTCCTAAGTAGCTAAATCGAGTTACAGATTT-TGTAGTATTTATTGCATTTCATTTTAATAAGCAGTTATTATAGTTGAA----TAATTACTTCATCACAGGTGTAACAGATATCACAGGGGTGACATCAGTGA-AAGTGCTTTATCACTGCTTTTCCTGTGCCATGGGGTAATAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195351943 781 + 198332218 ctTTTATGCTTTCTTTTGTTTTGATTATGTAATCTCTTTCTAAACAGTTCAAATAAAGTTCGAAAGTAGGTTTTTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAACATGGAGACAAA--------ATG--------CTATGTTGTTTATTTAGTAAGATCTATTGTTTT-CCCTCATCTTTTGTAGT--AGCTAACCACAG-------------TATCACCTCTCCCATATTTA--CTATACTCTTTGCCTGTAGCCAGCAAAGTAACATC-AGCAGAGGCAGTGAGTGGATGCTTCTTATGTGAGCCTTAGAATTATTTATTCTGGACAGAATTTGTTTTTAATGTTTAT-GAAGTCTCCAAAGTAGAATCTATTCCCCAGGCAGGCATTAGGTACAGCAG---------------------------------AAAAGACACTT-CCACTCAGGCGGGTGCTgaaagataatctctgtgacaaagtgattctccatgagaattgagtctttagtttctctgctgtcaggggagttgttgatggccatttacactttttgtataatgaggacacctgtttgctaataattgaactgaggatatcaCAACACAGGGCGTTTA-AAAATAACATGGGAATACAATTGCAGATTACATATACACATGAATCGATGTTTGCTGTTGGT-------------ATGGCTACCTATTTCCTAAGTAGCTAAATCGAGTTACAGATTT-TGTAGTATTTATTGTATTTCATTTTAAGAAGCAGTTATTATAGTTGAA----TAATTACTTCAT------------------CACAGGGGTGACATCAGTGA-AAGTGCTTTATCACTGCTTTTCCTGTGCCACGGGGTAATAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111313586 810 + 115148730 ctTTTATGCTTTCTCTTCTTTTGATTATGTAATCTC--TATAGACAGTTCAAATAAAGTTCGAAAGTAGGTTTTTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAACATGGAGACAAA--------ATG--------CTATGTTGTTTATTTATTAAGATCTATTGTTTT-CCCTCATCTTTTGTAGT--AGCTAACCACAG-------------TATCACCTCTCCCGTATTTA--CTGTACTCTTTGCGTGTAGCCAGCAAAGTAACATC-AGCAGAGGCAGTGAGAGGATGCTTCTTATGTGAGCCTTAGAATTATTTATTCTGGATAGAATTTGTTTTTAACGTTTATGGAAGTCTCCAAAGTAGAATCTATTCCCCAGGTAGGCATTAGGTACAGCAG---------------------------------AAAAGACACTT-CCACTCAGGCGGGTGCTgaaagataatctccgtgacaaagtgattctccatgagaattgagtctttagtttctctgctgtcaggggagttgttgatggccatttacactttttgtataatgaggacacctgtttgctaataattgaactgaggatatcaCAACACAGGGTGTTTA-AAAATAAGATGGGAATACAATTGCTGATTACATATACACATGAATAGGTGTTTGCTGTTGGTAGCTTAATGGGCCATGGCTACCTATTTCCTAAGTAGCTAAATCGAGTTACAGATTT-TG-AGTATTTGTTGCATTTCATTTTAATAAGCAGTTATTATAGTTGAA----TAATTACTTCATCGCAGGTGTAATAGGTATCACAGGGGTGACATCAGTGA-AAGTGCTTTATCACTGCTTTTCCTGTGCCACGGGGTAATAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181115398 808 + 184069350 ctTTTATGCTTTCTC-----TTGATTATGTAATCTCTTTCTAGACAGTTCAAATAAAGTTAGAAAGTAGGTTTCTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAGCATGGAGACAAA--------ATG--------CTATGCTGTTTATTTATTAAGATCTATTGTTTT-CCCTCATCATTTGTCGT--AGCTAACCATGG-------------TATCACCTCTCCTGTATCTA--CTATACTCTTTGCCTGTAGCCAGCAAAGCACCATC-AGCAGAGGCAGTGAGAGGATGCCTCTTATGTGAGCCTTAGAATTATTGATTCTGGACAGAATTTGTTTTTAATGTTTATGGAAGTCTCCCAAGTAGAGTCTATTCCCCAGGCAGGCATTAGGTACAGCAG---------------------------------TAAAGACGCTT-CCACTCAGGCGGGTGCTgaaagataatctccgtgacaaagtgattctccatgagaattgcgtcttcggtttctctgctgtcaggggagttgctgatggccgtttacacttgttgtataatgaagacacctgtttgctaataattgcactgaggatatcaCAACACAGGGCGTGAA-AAAATAACATGGGAATACAATTGCAGATTACATATACATGTGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATAGCTACCTATTTCCTAAGTAGCTAAATTGAGTGACAGATTT-TGTAGTATTTACTGCATTTCATTTTAATGAGCAGTTATTGTAGCTGAA----CAATTACTTCATCACAGGTGTAGCAGGTATCCCAGGGGTGACATCAGTGA-AAGTGCTTTATTGCTGCTTTTCCTGTGTCACAGGGTAATAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186453602 808 + 189454096 ctTTTATGCTTTCTC-----TTGATTATGTAATCTCTTTCTAGACAGTTCAAATAAAGTTAGAAAGTAGGTTTCTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAGCATGGAGACAAA--------ATG--------CTATGCTGTTTATTTATTAAGATCTATTGTTTT-CCCTCATCATTTGTCGT--AGCTAACCATGG-------------TATCACCTCTCCTGTATCTA--CTATACTCTTTGCCTGTAGCCAGCAAAGCACCATC-AGCAGAGGCAGTGAGAGGATGCCTCTTATGTGAGCCTTAGAATTATTGATTCTGGACAGAATTTGTTTTTAATGTTTATGGAAGTCTCCCAAGTAGAGTCTATTCCCCAGGCAGGCATCAGGTACAGCAG---------------------------------AAAAGACGCTT-CCACTCAGGCGGGTGCTGAAAGATAATCTCCGTGACAAAGTGATtctccatgagaattgcgtcttcggtttctctgctgtcaggggagttgctgatggccgtttacacttgttgtataatgaagacacctgtttgctaataattgcactgaggatatcaCAACACAGGGCGTGAA-AAAATAACATGGGAATACAATTGCAGATTACATATACATGTGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATAGCTACCTATTTCCTAAGTAGCTAAATTGAGTGACAGATTT-TGTAGTATTTACTGCATTTCATTTTAATGAGCAGTTATTGTAGCTGAA----CAATTACTTCATCACAGGTGTAGCAGGTATCACAGGGGTGACATCAGTGA-AAGTGCTTTATTGCTGCTTTTCCTGTGTCACAGGGTAATAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176068344 806 + 178775436 CTTTTATGCTTTCTC-----TTGATTATGTAATCTCTTTCTAGACAGTTCAAATAAAGTTGGAAAGtaggtttctcttttcttc-tttagaagcCAATTTCCTTTGAAGCACGGAGACAAA--------ATG--------CTATGCTGTTTATTTATTAAGATCTATTGTTTT-CCCTCATCATTTGTCGT--AGCTAACCATGG-------------TATCACCTCTCCCGTATTTA--CTATACTCTTTGCCTGTAGCCAGCAAAGCACCATC-AGCAGAGGCAGTGAGAGGATGCCTCTTATGTGAGCCTTAGAATTATTGATTCTGGACAGAATTTGTTTTTAGTGTTTATGGAAGTCTCCCAAGTAGAGTCTATTCCCCAGGCAGGCATCAGGTACAGCAG---------------------------------AAAAGATGCTT-CCACTCAGGCGGGTGCTGAAAGATAATCTCCGTGACAAAGTGATTCTCCATGAGAATTGCGTCTT-GGTTTCTCTGCTGTCAGGGGAGTTGCTGATGGCCGTTTACACTTGTTGTATAATGAGGACACCTGTTTGCTAATAATTGCACTGAGGATATCACAACACCGTGCGTGAA-AAAATAACATGGGAATACAATTGCAGATTACATATACATGTGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATAGCTACCTATTTCCTAAGTAGCTAAATTGAGTGACAGATTT-TGTAGTATTTACTGCA-TTCATTTTAATGAGCAGTTATTGTAGTTGAA----CAATTACTTCATCACAGGTGTAGCAGGTATCACAGGGGTGACATCAGTGA-AAGTGCTTTATCGCTGCTTTTCCTGTGTCACAGGGTAATAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132910069 808 + 135778131 ctTTTATGCTTTCTC-----TTGATTATGTAATCTCTTTCTAGACAGTTCAAATAAAGTTGGAAAGTAGGTTTCTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAGCATGGAGACAAA--------ATG--------CTATGCTGTTTATTTATTAAGATCTATTGTTTT-CCCTCATCGTTTGTCAT--AGCTAACCATGG-------------TATCACCTCTCCTATATCTA--CTATACTCTTTGCCTGTAGCCAGCAAAGCACCATC-AGCAGAGGCAGTGAGAGGATGCCTCCTATGTGAGCCTTAGAATTATTGATTCTGGACAGAATTTGTGTTTAATGTTTATGGAAGTCTCCCAAGTAGAGTCTATTCCCCAGGCAGGCATTAGGTACAGCAG---------------------------------AAAAGACGCTT-CCACTCAGGCGGGTGctggaagataatctccgtgacaaagtgattctccatgagaattgcgtcttcggtttctttgctgtcaggggagttgctgatggccgtttacacttgttgtataatgaagacacctgtttgctaataattgcactgaggatatcaCAACACAGGGCGTGAA-AAAATAACATGGGAATACAATTGCAGATTACATATACATGTGAATAGATGTTTGCTGTTGGTAGCTTAATGGGCCATAGCTACCTATTTCCTAAGTAGCTAAATTGAGTGACAGATTT-TGTAGTATTTACTGCATTTCATTTTAATGAGCAGTTATTGTAGTTGAA----TAATTACTTCATCGCAGGTGTAGCAGGTATCACAGGGGTGACATCAGTGA-AGGTGCTTTGTCGCTGCTTTTCCTGTGTCACGGGGTAATAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188295917 794 - 190850796 CTTTTATGCTTTCTTTTGTTTTGATCATATAGTCTCTTTCTAGACAGTTCAAATAAAGTTCTAAAGTAGGGTTTTCTTTTCTTC-TTTAGAAGCCAATTTCCTTTGAAACATGGAGACAAA--------ATG--------CTATGTTGTTTATTTATTAAGATCTATTTTTTTGCCCTTGTCTTTTGTAGT--AGCTAACCACAG-------------GATCACCTCTCCCATATTTA--CTATACTTTTTGCCTGTAGCCAGCAAAGTAACATC-AGTAGAGGCGGTGAGAGGATGCTTCTTATGTGAGCCTTGGAATTATTTATTCTGGACAGAATTTGTTTTTCCTGTGTATGGAATTCTCCAAAGCAGGATCTATTCCCCAGGCAGGCATTAGGTACAGCAG---------------------------------AAAAGACGCTT-CCACTCAGGCGGTTGCTGAAAAACAATCTCCGTGACAAAGTGATTCTCCATGAGAATTGGG---------TCTCTGCTGTCAGGGGAGTTGCT-ATGGCCATTTACACTTTttgtataatgaggacacctgtttgctaataactgaactgagGATGTCACAACACAGGGTATTAC-AAAATAACGTGGGAATACAATTGCAGATTACATATACACACAAATAGATCTTTGCCGTTGGCAGTTTAATGGGCCATAGC----TATTTCCTATGTAGCTAAATTGAGTTACAGATTT-TGTAGTATTTATTGCATTTCATTTTAATAACCAGTTACGATAGTTGAATAACTAATTACTTCATCAC---------AAATATCACAGGGGTGTCATCAATGA-AAGTGCTTGATCACTGCTTTTCCTGTGTCA-GGGGTAATAA i calJac3.chr3 C 0 I 322 s mm10.chr8 84772565 806 - 129401213 CTTCCATATTTTCTT---TTATAATTATGTCATTGCCTATTAAACGATCCAAG-AAAGTCCAGAAATAATTTTCCCTTTCTCCT-TTTAGAAGC---------------TACAGAGGTAAA--------CTGTGTGTCTTCTCTACTGTTTGTTTATTAAGGTCCGTAGTGCT-CCCTCAGCTCAAGCTGG--AAGGAACCCTAC-------------CATCCTCCTTTCTGTGTTCG--TTGAACTCCAT--TTGCAACCAGCACAGTGGTATCTAGCAGAGGCAACTGGAGGTTGCTTCTTGTGTGAACCTTGTAGTCATT--TTGGAGACACAATCTGCCTTTGCTGTTTATGGATGTCTCCAAAGTAGGGTCTATTCTCTATGCAGGTTTTACCTAGAGCCaaaaaataaaaattaaaaaaaaattaaaaaaaCCAAAAGCCCTTT-CCCCGTA-------GCTGGATGAACATTCCTGTGACAGGGTGACTCTCTATGAGGACTGACGTTTTTGTTTCTCTGCTATCAAGGGAGTTGTTTGTGACTGATTGCACTTTTTGTATAATGAGGACACCAGCTTGCTAATAACTGAGCTGCGGGTATTGTATAACAGTACATTAAGAAAGTAGCCCGG------------AGATCACACAC--------TTAGGTCTCTGCTCATGGTAGCTTAACGCGCCATAAC------TTTCCTAAGTAGCTAAATTGACTTACAGATTTCTATGGTATTTATTGCATTTCATTTTAATAAGAAGCTATTATAGTTGAATAACTAATTACTGTATAGCAGGTGTGACAAATATCACTGGAGCGCCATCAATAAGAAATGCTTTATGGCGGCTTTCTTCTTGTCTCGAGGAAATAA i mm10.chr8 I 1274 C 0 s canFam3.chr16 15774746 829 - 59632846 cttttgtgctttctcTCATTTTGATCATGTAAT----TTCTAGACGGTCCAAAAACAGTTCAAAAGTAGATTTTCCTTTCCCCCTTTTAGAAGTCAATTTTCTTTGAAACACAGAGACAAACAGTTTGCCTG--------CTGCCTTCTTTGCTTATTAAAATGTATTGTTTT-CCCTC--CACTTGTAGTTCAGCTACCTGTGGCTAAGGCGAGCACCATCTTCTCCCCTGCAACCAGCATGTACTTCTCGTCTGCAGCCCACCAAGGAACACG-AGCAGAGGCAGCCAGAGGATGTGGCTTGTGTGAGCCTTGGAATTATTCATTGTAGACAGAATTTATCTTTAATACTCCTGGAAGTCTCCAAAGTCAAATCTATTCCCCAGGCAGGCATTAAGTACAGGAA---------------------------------AGCAGACCTTTCCCACTCAGGctgaggttgaatgatcatctccatgacagagtgattgtccatgagaacggagtctttggcttctctgccatcaggggagttgtttatggccatttatactttttgtataatgaggacacctgtttgctaataactgaactgagaGTAGCACAACACAGA--ATTAA-AAAATAACATGGGACTAC-ATTGCAGATCACATACAGAGACAGATAGATCTTTGCTCTTGGTAGCTTAACGGACCATAGC------TTTCCTAAGTAGCTAAATTGTCTTACAGATTT-TCTAGTATTTATTGCATTTCATTTTAATAAGCAGTTATTATAGTCGAATAACTAATTACTTTGTAGCAGGTATAACAAATATCATGGAGGTGTCATCAATTA-AAGTGTTTTATCACTGCTTTTCCTGTGTCACAAGGTAATAA i canFam3.chr16 C 0 C 0 a score=663838.000000 s hg38.chr4_KI270785v1_alt 110536 229 + 119912 TCAAAGACAGAGCTTAAAAGAAATAAA---A--AGTTCCCTTAGTGAAGCAGATTGAGATTTCATTTTCAGTGCGACCCAGTATGCTTGATTGCTACATGAATAAACTGGTGTAGGCTAGAAACCATACCTCTATGGAAGTGAATTGTGTTGAATGAGGGACTAAA-----GGGAAGAAGATCACCTGAAT---------------------------------------CT-----GGGGACCCTGTTGCTCCTGGAGTAGTGCAGCATTGGGATATG-TTT-T- s panTro4.chr4 190377889 229 + 193495092 TCAAAGACAGAGCTTAAAAGAAATAAA---A--AGTTCCCTTAGTGAAGCAGATTGAGATTTCATTTTCAGTGCGACCCAGTATGCTTGATTGCTACATGAATAAACTGGTGTAGGCTAGAAACCATACCTCTATGGAAGTGAATTGTGTTGAATGAGGGACTAAA-----GGGAGGAAGATCACCTGAAT---------------------------------------CT-----GGGGACCCTGTTGCTCCTGGAGTAGTGCAGCATTGGGATATG-TTT-T- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195352724 229 + 198332218 TCAAAGACAGAGCTTAAAAGAAATAAA---A--AGTTCCCTTAGTGAAGCAAATTGAGATTTCATTTTCAGTGCGACCCAGTATGCTCGATTGCTACATGAATAAACTGGTGTAGGCTAGAAACCATACCTCTATGGAAGTGAATTGTGTTGAATGAAGGACTAAA-----GGGAAGAAGATCACCTGAAT---------------------------------------CT-----GGGGACCCTGTCGCTCCTGGAGGAGTGCAGCATTGGGATATG-TTT-T- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314396 229 + 115148730 TCAAAGACAGAGCTTAAAAGAAATAAA---A--AGTTCTCTTAGTGAAGCAAATTGAGATTTCACTTTCAGTGCGACCCAGTATGCTTGATTGCTACATGAATAAACTGGTGTAAGCTGGAAACCATACCTCTATGGAAGTGAATTGTGTTGAACGAGGGACTAAA-----GGGAAGAACATCACCTGAAT---------------------------------------CT-----GGGGACTCTGTCGCTCCTGGAGGAGTGCAGCATTGGGATATG-TTT-T- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116206 227 + 184069350 TCAAAGACAGGGCTTAAAAGCGATAAA---A--AGTTCCCTTAGTGAAGCAAATTGAGATTTCATTTTCAGTGCGACTCAGTATGCTTGACTGCTACATGAGTAAACTGGTGTAGGCTAGAAACCAGACCTCTTTGGAAGTGAATTGTGTTGAATGAGGGACGAAA-----AGGAAGAAGATCACCTGGAT---------------------------------------CT-----GGGCACCC-GTCGCTCCTGGAGGAGCGCAGCTTTGGAATATG-TTT--- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454410 227 + 189454096 TCAAAGACAGGGCTTAAAAGCGATAAA---A--AGTTCCCTTAGTGAAGCAAATTGAGATTTCATTTTCAGTGCGACTCAGTATGCTTGACTGCTACATGAGTAAACTGGTGTAGGCTAGAAACCAGACCTCTTTGGAAGTGAATTGTGTTGAATGAGGGACGAAA-----AGGAAGAAGATCACCTGGAT---------------------------------------CT-----GGGCACCC-GTCGCTCCTGGAGGAGCGCAGCTTTGGAATATG-TTT--- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069150 228 + 178775436 TCAAAGACAGGgcttaaaagcaataaa---a--agttCCCTTAGTGAAGCAAATTGAGATTTCATTTTCAGTGCGACTCAGTATGCTTGACTGCTACATGAGTAAACTGGTGTAGGCTAGAAACCAGACCTCTATGGAAGTGAATTGTGTTGAATGAGGGACTAAA-----AGGAAGAAGATCACCTGGAT---------------------------------------CT-----GGGCACCC-GTCGCTCCTGGAGGAGCGCAGCTTTGGAATATGTTTT--- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132910877 228 + 135778131 TCAAAGACAGGGCTTAAACGCAATAAA---A--AGTTCCCTTAGTGAAGCAAACTGAGATTTCATTTTCAGTGCGACTCAGTATGCTTGACTGCTACGTGAGTAAACTGGTGTAGGCTAGAAACCAGACCTCTATGGAAGTGAATTGTGTTGAATGAGGGACTAAA-----AGGAAGAAGATCACCTGGAT---------------------------------------CT-----GGGCACCC-GTCGCTCCTGGAGGAGCGCAGCTTTGGAATATG-TTTT-- i chlSab2.chr7 C 0 I 12 s mm10.chr8 84773371 272 - 129401213 TCAAAGCCAGAGCTCAAAAGAAAGGAAACTA--AGATCTATCTGTGCAACAAATAAAGATTTCCTTTTCAGTGTGCCTCAATATGCTTTATTGTTACATTAATCAACCAGCCAGGGCTGGAAACAATAGCTCCATTGAAGTG-ACTGTATTAAATTAGTAACTAAACAGAGGGGAAAAGTACCCCCAAAACAAACAAAAACAACAACAACAAAAATACTATCTAAGCTCACT-----CAGGACCTGGCCACTCCTGGAGGAGGCCTGTCTTTGGATCTC-T----- i mm10.chr8 C 0 C 0 s canFam3.chr16 15775575 235 - 59632846 TCAAAGGCAGAGCTTAAAAGAAATAAA---ATGAGTTCCATTAGTGAAGCAAATTAAGATTTCATTTTCAGTGAGACTCAGTATGCTTCAATGCTGCATGAATAAGCTAGCATAGACCAGAAACAATAATTTTATCAAAGTGATTTGTGCTGAATGTGTGAATAAA------CAAAAAAGATTTTCTGAGT---------------------------------------CCATTCAGGGGCCAGTGTC-CCCCTGAAGGAGCGCAGTGTTTGGGTTCC-TTT-TC i canFam3.chr16 C 0 C 0 e calJac3.chr3 188296711 322 - 190850796 I a score=23513.000000 s hg38.chr4_KI270785v1_alt 110765 10 + 119912 TCCTCTAGCT s panTro4.chr4 190378118 10 + 193495092 TCCTCTAGCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195352953 10 + 198332218 TCCTCTAGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314625 10 + 115148730 TCCTCTAGCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116433 10 + 184069350 TCCTCCAGCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454637 10 + 189454096 TCCTCCAGCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069378 10 + 178775436 TCCTCTGGCT i papAnu2.chr5 C 0 C 0 s mm10.chr8 84773643 10 - 129401213 TCTTTTAACT i mm10.chr8 C 0 C 0 s canFam3.chr16 15775810 10 - 59632846 TCTTTTACCT i canFam3.chr16 C 0 C 0 e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I a score=9953.000000 s hg38.chr4_KI270785v1_alt 110775 11 + 119912 GGTTGGCATAT s panTro4.chr4 190378128 11 + 193495092 GGTTGGCATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195352963 11 + 198332218 GGTTGGCATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314635 11 + 115148730 GGTTGGCATAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116443 11 + 184069350 GGTTGGCATAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454647 11 + 189454096 GGTTGGCATAT i macFas5.chr5 C 0 C 0 s mm10.chr8 84773653 9 - 129401213 GGATCGCTT-- i mm10.chr8 C 0 C 0 s canFam3.chr16 15775820 5 - 59632846 GGAAG------ i canFam3.chr16 C 0 C 0 e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C a score=340.000000 s hg38.chr4_KI270785v1_alt 110786 1 + 119912 A s panTro4.chr4 190378139 1 + 193495092 A i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195352974 1 + 198332218 A i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314646 1 + 115148730 C i nomLeu3.chr7b C 0 I 302 s mm10.chr8 84773662 1 - 129401213 A i mm10.chr8 C 0 C 0 s canFam3.chr16 15775825 1 - 59632846 A i canFam3.chr16 C 0 C 0 e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=14703.000000 s hg38.chr4_KI270785v1_alt 110787 13 + 119912 CCATATAGAGAGG s panTro4.chr4 190378140 13 + 193495092 CCATATAGAGAGG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195352975 13 + 198332218 CCTTATAGAGAGG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314949 13 + 115148730 CCATATAGAGAGG i nomLeu3.chr7b I 302 C 0 s mm10.chr8 84773663 13 - 129401213 CCATATATAGAAG i mm10.chr8 C 0 I 1220 s canFam3.chr16 15775826 13 - 59632846 CTATATAGAGAAG i canFam3.chr16 C 0 C 0 e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=1275.000000 s hg38.chr4_KI270785v1_alt 110800 10 + 119912 TTGGCATATA--- s panTro4.chr4 190378153 10 + 193495092 TTGGCATATA--- i panTro4.chr4 C 0 I 210 s ponAbe2.chr4 195352988 8 + 198332218 CTGGCATA----- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314962 10 + 115148730 TTGGCATATA--- i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 15775839 10 - 59632846 ---GCAAAGTCTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=15943.000000 s hg38.chr4_KI270785v1_alt 110810 31 + 119912 CCGTATAGAGAGGTTGGCATACTGTATAGAG s panTro4.chr4 190378373 31 + 193495092 CCGTATAGAGAGGTTGGCATACTATATAGAG i panTro4.chr4 I 210 C 0 s ponAbe2.chr4 195352996 31 + 198332218 CCGTATAGAGAGGCTGGCATACCGTATAGAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111314972 31 + 115148730 CTGCATAGAGAGGTTGGCATACTGTATAGAG i nomLeu3.chr7b C 0 C 0 s canFam3.chr16 15775849 29 - 59632846 CAGTCTTAATTTGT--GACTATGGTATAGAG i canFam3.chr16 C 0 I 498 e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=16466.000000 s hg38.chr4_KI270785v1_alt 110841 34 + 119912 AGGTTGGCCTA--CCTTATAGAGAGGTTGGCATATA s panTro4.chr4 190378404 36 + 193495092 AGGTTGGCATATACCGTATAGAGAGGTTGGCATATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195353027 34 + 198332218 AGGTTGGCATA--CCGTATAGAGAGGTTGGCATATA i ponAbe2.chr4 C 0 I 260 s nomLeu3.chr7b 111315003 34 + 115148730 AGGTTGGCATA--CCATATAGAGAGGTTGGCATATA i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=20737.000000 s hg38.chr4_KI270785v1_alt 110875 47 + 119912 ------------------------------------------CCATATAGAGAGGTTGGCATATACCATATAGAGAGGTTGGGATACCG s panTro4.chr4 190378440 47 + 193495092 ------------------------------------------CCGTATAGAGAGGTTGGCATATACCATATAGAGAGGTTGGCATACCG i panTro4.chr4 C 0 I 199 s ponAbe2.chr4 195353321 47 + 198332218 ------------------------------------------CCATATAGAGAGGTTGGCATATACCGTATAGAGAGGCTGGCATACCA i ponAbe2.chr4 I 260 C 0 s nomLeu3.chr7b 111315037 89 + 115148730 CCATATAGAGAGGTTGGCATACCATATAGAGAGGTTGGCATACCGTATAGAGAGGTTGGCATATACCATATAGAGAGGTTGGCATACCG i nomLeu3.chr7b C 0 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=23053.000000 s hg38.chr4_KI270785v1_alt 110922 44 + 119912 TATAGAGAGGTTGGCATACCGTATAGAGAGGTTGGCATATACTG s panTro4.chr4 190378686 44 + 193495092 TATAGAGAGGTTGGCATACCGTATGGAGAGGTTGGCATATACCG i panTro4.chr4 I 199 C 0 s ponAbe2.chr4 195353368 44 + 198332218 TATAGAGAGGTTGGCATACCATATAGAGAGGTTGGCATATACCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315126 44 + 115148730 TATAGAGAGGCTGGCATACCATATAGAGAGGTTGGCATATACCG i nomLeu3.chr7b C 0 I 396 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=16089.000000 s hg38.chr4_KI270785v1_alt 110966 29 + 119912 TATAGAGAGGTTGGCATACCGTATAGAGA s panTro4.chr4 190378730 29 + 193495092 TATAGAGAGGTTGGCATACCGTATAGAGA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195353412 29 + 198332218 TATAGAGAGGTTGGCATACCATATAGAGA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315566 29 + 115148730 TATAGAGAGGTTGGCATACCGTATAGAGA i nomLeu3.chr7b I 396 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e papAnu2.chr5 176069388 0 + 178775436 C e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=2422.000000 s hg38.chr4_KI270785v1_alt 110995 3 + 119912 GGT s panTro4.chr4 190378759 3 + 193495092 GGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195353441 3 + 198332218 GGC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315595 3 + 115148730 GGT i nomLeu3.chr7b C 0 C 0 s papAnu2.chr5 176069388 3 + 178775436 GGT i papAnu2.chr5 C 0 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e chlSab2.chr7 132911105 12 + 135778131 I e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=10850.000000 s hg38.chr4_KI270785v1_alt 110998 8 + 119912 TGGCATAC s panTro4.chr4 190378762 8 + 193495092 TGGCATAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195353444 8 + 198332218 TGGCATAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315598 8 + 115148730 TGGCATAC i nomLeu3.chr7b C 0 C 0 s papAnu2.chr5 176069391 8 + 178775436 TGGCATAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911117 8 + 135778131 TGGCACAC i chlSab2.chr7 I 12 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I e macFas5.chr5 186454658 0 + 189454096 C e rheMac3.chr5 181116454 0 + 184069350 C a score=2691.000000 s hg38.chr4_KI270785v1_alt 111006 2 + 119912 CA s panTro4.chr4 190378770 2 + 193495092 CA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195353452 2 + 198332218 CA i ponAbe2.chr4 C 0 I 965 s nomLeu3.chr7b 111315606 2 + 115148730 TG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116454 2 + 184069350 CG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454658 2 + 189454096 CG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069399 2 + 178775436 CG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911125 2 + 135778131 CG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I a score=347038.000000 s hg38.chr4_KI270785v1_alt 111008 164 + 119912 TATAGAGAAGGCAAATGCTTTGTTCCACCTGAATTTGTGACTGTGGTGCAGAGGATTTCATGGCTAAAAATAGAAAACTTCTCACGTTACTATAGGTCTAAATGGAGGTAATATTTTAAAGACTAAAATCGATGTTGATAATTACAGTAGTTTATGTTATATCA s panTro4.chr4 190378772 164 + 193495092 TATAGAGAAGGCAAATGCTTTGTTCCACCTGAATTTGTGACTGTGGTGCAGAGGATTTCATGGCTAAAAATAGAAAACTTCTCCCGTTACTACAGGTCTAAATGGAGGTAATATTTTAAAGACTAAAATCGATGTTGATAATTACAGTAGTTTATGTTATATCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195354419 164 + 198332218 TATAGAGAAGGCAAATTCTTTTTTCCACCTGAATTTGTGACTGTGGTGCAGAGGATTTCATGGCTAAAAATAGAAAACTTCTCCCATTACTACAGGTCTAAATGGAGGTAATATTTTAAAGACTAAAATCGATGTTGATAATTATAGCAGTTTATGTTATATCA i ponAbe2.chr4 I 965 C 0 s nomLeu3.chr7b 111315608 164 + 115148730 TATAGAGAAGGCAAATGCTTTGTTCCACCTGAATTTGTGACTGTGGTGCAGAGGATTTCATGGCTAAAAATAGAAAACTTCTCCCATTACTACAGGTCTAAATGGAGGTAATATTTTAAAGACTAAAATCGATGTTGATAATTATAGCAGTTTATGTTATATCA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116456 163 + 184069350 TACAGAGAAGGCAAATGTTTTATTCCCCCTGAATTTCTGACTGTGGTGCAGAGGACGTCAAGGTCAAAAGTAGAAAAGTCCT-CCGTTTCTGCAGGCTTAAATAGAGGTAATATTTTAAAGACTAACATTGATACTGATAATTACAGCTGCTTCTGTTATATCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454660 163 + 189454096 TACAGAGAAGGCAAATGTTTTATTTCCCCTGAATTTCTGACTGTGGTGCAGAGGACGTCAAGGTCAAAAGTAGAAAAGTCCT-CCGTTTCTGCAGGCTTAAATAGAGGTAATATTTTAAAGACTAACATTGATACTGATAATTACAGCTGCTTCTGTTATATCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069401 162 + 178775436 TATAGAGAAGGCAAATGTTTGGTT--CCCTGAATTTGTGACTGTGGTGCAGAGGGCGTCAAGGTCAAAAATAGAAAACTCCTCCCATTTCTGCAGGTTTAAATAGAGGTaatattttaaagactaaaaTCGATACTGATAATTATAGCTGCTTCTGTTACatca i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911127 164 + 135778131 TATAGAGAAGGCAAATGTTTTATTTCCCCTGAATTTGTGACTGTGGTGCAGAGGATGTCAAGGTCAAAAATAGAAAACTCCTCCCGTTTCTGCAGGTTTAAGTAGAGGTAATATTTTAAAGACTAAAATCGATACTGATAATTATAGCTGCTTCTGTTATATCA i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15775878 498 - 59632846 I e mm10.chr8 84773676 1220 - 129401213 I e calJac3.chr3 188296711 322 - 190850796 I a score=119808.000000 s hg38.chr4_KI270785v1_alt 111172 43 + 119912 AAACATCAAAAATAAAAGTAACCGAATAATCAAAGGACCTAAC s panTro4.chr4 190378936 43 + 193495092 AAACATCAAAAATAAAAGTAACCAAATAATCAAAGGACCTAAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195354583 43 + 198332218 AAACATCAAAAATAAAAGTAACCAAATAATCGAAGGACCTAAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315772 43 + 115148730 AAACATCAAAACTAAAAGTAACCAAATAATCGAAGGACCTAAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116619 43 + 184069350 AAACTTCAAAAATAAAAGTAACCAAATAATCGAAGGACCTAAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454823 43 + 189454096 AAACTTCAAAAATAAAAGTAACCAAATAATCGAAGGACCTAAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069563 43 + 178775436 aaacttcaaaaataaaagtaaccaaATAATCGAAGGACTTAAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911291 43 + 135778131 AAACTTCAAAAATAAAAGTAACCAAATAATCGAAGGACCTAAC i chlSab2.chr7 C 0 C 0 s mm10.chr8 84774896 43 - 129401213 AAACATTAAAGAGAAAAGCAAACAGATAATCAAAGATCTCATT i mm10.chr8 I 1220 C 0 e canFam3.chr16 15775878 498 - 59632846 I e calJac3.chr3 188296711 322 - 190850796 I a score=357922.000000 s hg38.chr4_KI270785v1_alt 111215 178 + 119912 ACCCAAAT-----TACCAACTGCCTTTGATctatatatactatatataatatatgatctatat----at----------attata-----tataatatatatTAT--------------------------------------TTTTTTCTTAGAAGCAATTGGCAgaatcatggaatattaca-aacattaaaacttatagagggctttaagaatcactt--------tatttatcctcctatttttg s panTro4.chr4 190378979 178 + 193495092 ACCCAAAT-----TACCAACCGCCTTTGATctatatatactatatataatatatgatctatat----at----------attata-----tataatatatatTAT--------------------------------------TTTTTTCTTAGAAGCAATTGGCAgaatcatggaatattaca-aacattaaaacttatagagggctttaagaatcactt--------tatttatcctcctatttttg i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195354626 150 + 198332218 ACCCAAAT-----TACCAACCACCTTTGATCtatatata-------------------------------------------ata-----tataatatatattat-------------------------------------attttttCTTAGAAGCAATTGGCAgaatcatggaatattaca-aacattaaaacttatagagggctttaagaatcactt--------tatttatcctcctatttttg i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315815 172 + 115148730 ACCCAAAT-----TACCAACCGCCTTTGatctatatatattatatataatatatgatctat---------------------ata-----taaaatatatattat-------------------------------------atTTTTTCTTAGAAGCAATTGGCAgaatcatggaatattaca-aacattaaaacttatagagggctttaagaatcactt--------tatttatcctcctatttttg i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116662 162 + 184069350 ACCCAATT-----TACCAACCGCCTTTGatctatatatg----------tatattatagatat----gt-------------ata-----tatattacata------------------------------------------tTTTTTCTTAGACGCAATTGGCAgaatcatggaatattacataacactgaaacttagagaggactttaagaatcactt--------tatttatccttctatttttg i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186454866 162 + 189454096 ACCCAATT-----TACCAACCGCCTTTGatctatatatg----------tatattatagatat----gt-------------ata-----tatattacata------------------------------------------tTTTTTCTTAGACGCAATTGGCAgaatcatggaatattacataacactgaaacttagagaggactttaagaatcactt--------tatttatccttctatttttg i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069606 161 + 178775436 ACCCAATT-----TACCAACCGCCTTTgatctatgtatg----------tatattatatatat----gt-------------ata-----tattttacata------------------------------------------ttttttcttagatGCAATTGGCAGAATCATGGAATATTACA-AACACTGAAACTTAGAGAGGACTTTAAGAATCACTT--------TATTTATCCTTCTAtttgtg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911334 161 + 135778131 ACCCAATT-----TACCAACCGCCTTTGATCTCTCTCta----------tatattatacatat----gt-------------ata-----tatattacata------------------------------------------tTTTTTCTTAGACACAATTGGCAgaatcatggaatattaca-aacactgaaacttagagaggactttaagaatcactt--------tgtttatccttctatttttg i chlSab2.chr7 C 0 C 0 s mm10.chr8 84774939 172 - 129401213 ACTCTGAT-----AATCTAC-----TTGATTTAACTATA--------GATATATAATCAATAA----ACCAACAAAAGGCAAATAATTCCTATGATATATACTTT------------------------------------TTTTTTTCTTTAGAAGGAGCTGACAGACACAGGGAATACTAGA----------ACTTACAAAGGGTTTTAGGAATTGAAT--------TATTTATCCTCTTATTTTG- i mm10.chr8 C 0 C 0 s canFam3.chr16 15776376 222 - 59632846 acccaggttccccTACCAACCCCTTTTTGATTATACATG-----TATAAGTTATCATATGTATTTGAGT-------------ATA-----TATA-TATATCTTtgtgtgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtTCTTAGAAACAGTTGATGgaatcatggaatatttga-aacatagaacc--aaaggaagtttcgaggatcacattatcacaatatttatttctctatttttg i canFam3.chr16 I 498 C 0 e calJac3.chr3 188296711 322 - 190850796 I a score=675590.000000 s hg38.chr4_KI270785v1_alt 111393 203 + 119912 taattaaaaaataaggccagagtgttgta-ttgacttggccagttt-ccatagttaatACTGAGGGAT----AACACTTCCTTAAAGTATAATAG-----TGATATTTGCACACAACAATCTTTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCACTCTGAAAAAAATGAATTTTGGCTTGCTCTC-AATTTTACCTCTTTATTT s panTro4.chr4 190379157 203 + 193495092 taattaaaaaataaggccagagtgttgta-ttgacttggccagttt-ccatagttaatACTGAGGGAT----AACACTTCCTTAAAGTATAATAG-----TGATATTTTCACACAACAATCTTTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCATTCTGAAAAAAATGAATTTTGGCTTGCTCTC-AATTTTACCTCTTTATTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195354776 203 + 198332218 taatcaaaaaataaggccagagtgttgta-ttgacttggccagttt-ccatagttaatACTGAGGGAT----AACACTTCCTTAAAGTATAATAG-----TGATATTTGCACACAACAATCTTTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCACTCTGAAAAAAATGAATTTTGGCTTGCTCTC-AATTTTACCTCTTTATTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111315987 202 + 115148730 taattaaaaaataaggccagagtgttgta-ttgacttgcccagttt-ccatagttaatACTGAGGGAT----AACACTTCCTTAAAGTATAATAG-----TGATATTTGCACATAACAATCTTTCTACTTCTCT-CCTTAAAACTTTCTATTTAACTTCAGTTCACTCTGAAAAAAATGAATTTCGGCTTGCTCTC-AATTTTACCTCTTTATTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181116824 197 + 184069350 taattaaaaaataaggccagagtgttaaa-ttgacttggccagttt-ccatagttaatAT-----GAT----AATACTTCCCTAAAGTATAATA------TGATATTTGCATATAACAATCGTTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCACCCTGAAAAAAATGAATTTTGGTTTGTTCTC-AATTTTACCTCTTTATTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186455028 197 + 189454096 taattaaaaaataaggccagagtgttaaa-ttgacttggccagttt-ccatagttaatAT-----GAT----AATACTTCCCTAAAGTATAATA------TGATATTTGCATATAACAATCGTTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCACCCTGAAAAAAATGAATTTTGGTTTGTTCTC-AATTTTACCTCTTTATTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069767 197 + 178775436 taattaaaaaataaggccAGAGTGTTAAA-TTGATGTGGCCAGTTT-CCATAGTTAATATCGAGGGCT----AACACTTCCCTAAAGTATAATG------TGATATTTGCACATAACAATCTTTCTACTTCTC-----TAAAACTTCCTATTTAACTACAGTTCactctgaaaaaaatgaattttggtTTGTTCTC-AATTTTACCTCTTTATTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911495 197 + 135778131 taattaaaaaataaggccagagtgttaaa-ttgacttggccagttt-ccatagttaatAT-----GAT----AACACTTCCCTAAAGTATAATA------TGATATTTGCACATAACAATCATTCTACTTCTCTACTTTAAAACTTCCTATTTAACTTCAGTTCACCCTGAAAAAAATGAATTTTGGTTTGTTCTC-AATTTTACCTCTTTATTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188297033 203 - 190850796 taataaaaaaaTAAGGCCAGAGTGTTGAA-TTGACTTGCTCAGTTT-CCATAGTTAATATCAAGGAAT----AACATTTCCTTAAAGGATAATAG-----TGATATTTGCACACAACAATCTTTTTGCTTCTCTACTTTACAACTTCCTATTTAACTTCAGTTCACTCTAAAGAAACTGAATTTTGGTTTGCTCTC-AATTTTACCCCTTTATTT i calJac3.chr3 I 322 C 0 s mm10.chr8 84775111 204 - 129401213 CAATTAGAAACAAA--TTAGATTATTGAATTTGCCTTGCCCATTCTATTAAAGGTATTACCTAGTTCT----AATACTATTTCAAATTATAATAATGAATTAATATTT--ATGTGGCGATCTTGGTATAGCTCCACTTCAAAACTTCACATTGAAATTTATTTTGTCCTTGGAAAAA--AGTTTTAATTTGGCTTC-AAATGTACtcttttcctt i mm10.chr8 C 0 I 808 s canFam3.chr16 15776598 198 - 59632846 taataaaaagctgaggacagagagctcaa-ttggcttgtccaattt--catagttaatgatgagggacagcaagcactTCCTTAACATTTAACAA-----TACTATTTGCACATAAATAATAATCTATGTTCCTACTTTAAAACTTC-------AGTTTAGCTCACTCTGCAAAAA--GAATTTTAATTTGGCTTCAAATTTCATCTCTTTACTC i canFam3.chr16 C 0 C 0 a score=307730.000000 s hg38.chr4_KI270785v1_alt 111596 97 + 119912 ACCAAAATAGAGGGTATCTGTATCACTATGTCAGGTAAAAA----TCTAAAT---TTTTGGAATTCATCTACCA-TTAGTGTATATATTCTAACCTTCATTACTT- s panTro4.chr4 190379360 97 + 193495092 ACCAAAATAGAGGGTATCTGTATCACTATGTCAGGTAAAAA----TCTAAAT---TTTTGGAATTCATCTACCA-TTAGTGTATATATTCTGACCTTCATTACTT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195354979 97 + 198332218 ACCAAAATAGAGGGTATCTGTATCACTATGTCAGGTAAAAA----TCTAAAT---TTTTGAAATTCATCTACCA-TTAGTGTATATATTCTGACCTTCATTACTT- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111316189 97 + 115148730 ACCAAAATATAGGGTATCTGTATCACTATGTCAGGTAAAAA----TCTAAAT---TTTTGAAATTCATCTACCA-CTAGTGTATATATTCTGACCTTCATTACTT- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181117021 99 + 184069350 ACCAAAATAGA-GGTATCTGTATCACCATGTAAGGTAAAAA----TCTAATTTGCTTTTAAAATTCATCTACCA-TTAGTGTCTACATTCTGACCTTCATTACTT- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186455225 99 + 189454096 ACCAAAATAGA-GGTATCTGTATCACCATGTAAGGTAAAAA----TCTAATTTGCTTTTAAAATTCATCTACCA-TTAGTGTCTACATTCTGACCTTCATTACTT- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176069964 100 + 178775436 ACCAAAATAGAGGGTATCTGTATCACCATGTAAGGTAAAAA----tctaatttgcttttgaaattCATCTACCA-TAAGTGTGTATATTCTGACCTTCATTACTT- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911692 100 + 135778131 ACCAAAATAGAGGGTATCTGTATCACCATGTAAGGTAAAAA----TCTAATTTGCTTTTAAAATTCATCTACCA-TTAGTGTCTACATTCTGACCTTCATTACTT- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188297236 100 - 190850796 ACCAAAATAGAGGGTATCTGTATCACAACGTAAGGTAAAAA----TCTAAATTGCTTTTGAAATTCATCTACCA-TTAGTGTCACTATTCCGACCTCCATTActt- i calJac3.chr3 C 0 C 0 s canFam3.chr16 15776796 103 - 59632846 ACCAATATAAAGGGTATTTGTAGCCTCATGCAGAGTAAAAATTACTTTAAATTGCTTCTGAAATTCAGTTACTACTTAGTACCAATGTTCTGAC---CATTATTTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84775315 808 - 129401213 I a score=1265928.000000 s hg38.chr4_KI270785v1_alt 111693 371 + 119912 GCAGGTAAAAATGTGATCATGCTAACAGCGACACCCAAATCTACTTATCTCCAAATCTCCAGGCGGCAACTCAGGCCAGATCCTTTCCCAGGTAATCTCAGGAATCCCCGAAGTGGCAATGACTTCCTCAGGAATACGGCTTTTAATTTTCTTTCTTTCCCT--CAAATTCTTCTTGGAGGTCTATTGCCCCTAAGCCCTAAGCTGCTGCTTTAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGTAGAG--------AGGCTACCTGTGGCTTCTCCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCTTGAGATGCAGTAT-TCAGATACCATCT s panTro4.chr4 190379457 371 + 193495092 GCAGGTAAAAATGTGATCATGCTAACAGCGACACCCAAATCTACTTATGTCCAAATCTCCAGGCAGCAACTCAGGCCAGATCCTTTCCCAGGTAATCTCAGGAATCCCCGAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAATTTTCTTTCTTTCCCT--CAAATTCTTCTTGGAGGTCTGCTGCCCCTAAGCCCTAAGCTGCTGCTTTAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGTAGAC--------AGGCTACCTGTGGCTTCTCCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCTTGAGATGCAGTAT-TCAGATACCATCT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195355076 371 + 198332218 GTAGGTAAAAATGTGATCATGCTAACACCGACACCCAAATCTACTTATCTCCAAATCTCCAGGCAGCAACTCAGGGCAGATCCTTTCCCAGGTAATCTCAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAAGTTTCTTTCTTTCCCT--CAAATTCTTCTTGGAGGTCTGCTGCCCCTAAGCCCTAAGCTGCTGCTTTAA---GCTGCTGCTGTCAT-ATTAGATGGTGAAGTAGAG--------AGGCTACCTGTGGCTTCTCCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTATTGAATCTTTGAGATGCAGTAT-TCAGATACCATCT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111316286 372 + 115148730 GCAGGTAAAAATGTGATCGTGCTAACACCGACAACCAAATCTACTTATCTCCAAATCTCCAGGCAGTAACTCAGGGCAGATCCTTTCCCAGGTAATCTTAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAATTTTCTTTCTTTCCCT--CAAATTCTTCTTGGAGGTCTGCTGCCCCTAAGCCCTAAGCTGCTGCTTTAA---GCTGCTCTTGTTGT-ATCAGATGGTGAAGTAGAG--------AGGCTACCTGTGGCTTCTCCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCTTGAGATGCAGTATGTCAGATACCATCT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181117120 378 + 184069350 GCAGGTAAAAATGTGATCACGCTAATACCGACACCCAAATCTGCTTATCTCCAAATCCCCAGGCAGAAACTCAGGGCAGATCCCTTCCCAGGTAATCTCAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAATTTTCTTTTTTTCCCT--CAAATTCTTCTTGGAGGTCTGCTGCCCCTAAGCCCTAAACTGCTGCCTTAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGGAGAGAGGCTGCGAGGCTACCTGTGACTTCTGCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCATGAGATGCAGTAT-TCA-ATACCATCT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186455324 378 + 189454096 GCAGGTAAAAATGTGATCACGCTAATACCGACACCCAAATCTGCTTATCTCCAAATCCCCAGGCAGAAACTCAGGGCAGATCCCTTCCCAGGTAATCTCAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAATTTTCTTTTTTTCCCT--CAAATTCTTCTTGGAGGTCCGCTGCCCCTAAGCCCTAAACTGCTGCCTTAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGGAGAGAGGCTGCGAGGCTACCTGTGACTTCTGCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCATGAGATGCAGTAT-TCA-ATACCATCT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176070064 379 + 178775436 GCAGGTAAAAATGTGATCACGCTAATACCGACACCCAAATCTGCTTACCTCCAAATCCCCAGGCAGAAACTCAGGGCAGATCCTTTCCCAGGTAATCTCAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACagctcttaattttctttttttccct--caaattctTCTTGGAGGACTACTGCCCTTAAGCCCTAAACTGCTGCTTTAA---GCTGCTGCTGTCAT-ATTAGATGGTGAAGTAGAGAGGCTACGAGGCTACCTGTGACTTCTGCCTGTG--GTTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCATGAGATGCAGTAT-TCAGATACCATCT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132911792 379 + 135778131 GCAGGTAAAAATGTGATCACGCTAATACCAACACCCAAATCTGCTTATCTCCAAATCCCCATGCAGAAACTCAGGGCAGATCCTTTCCCAGGTAATCTCAGGAATCCCCAAAGTGGCAATGACTTCCTCAGGAATACAGCTCTTAATTTTCTTTTTTTCCCT--CAAATTCTTCTTGGAGGTCTGCTGCCCCTAAGCCCTAAACTGCTGCTTTAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGTAGAGAGGCCACAAGGCTACCTGTGACTTCTACCTGTG--GTTAGTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGA-GCTTTTACTGAATCCATGGGATGCAGTAT-TCAGATACCATCT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188297336 358 - 190850796 gcaggtaaaaatgtgatcacattaacactgacacccaaacctacttatctccaaatccccaggcagaaactcagtgcaaatcttttcctaggtaatctcaggaatccccaacgtggcaatgacttcctcaggaatacagctcttaattttcttttttctccc--caaattcttcttggaggtctgctgcccctaagccC-------------TAA---GCTGCTGCTGTCGT-ATTAGATGGTGAAGTCAGG--------AGGCTACCTGTGGCTTCTCCCAGTC--ATTACTTGGGTCCCAGCACAGTGCTT-----------------------CTTAAGCTCAGAGTCTCAAAGCATTTTCATGT-GCTTTTACTGAATCTTTGAGGTGCAGTAT-TCAGATACCATCT i calJac3.chr3 C 0 C 0 s mm10.chr8 84776123 343 - 129401213 GTGGGCAACAATGTGATTTTAGT--CAGTGACG-TCAGAGCTCCTGAG----AACGCTTTAGGAGGAGAATT-GGGTGGATTAGTTTCCAAGAGATCTCAGAACTCTCCTGAAAGGTCCTGA----CTCAGGAGCATAGCTCACAACCTGATTGCTCTTCATTCCAAGTTCTTCCTGGGGGTTCTACTTGCCTAAGCCATCAGCTGCTGCTCTGATATACTGCTGCGGCTGTGATTAGGGGGAGAAATGGGGTGAC----AGG-------------------GTG--ACTCCCCAGAATCTAGCACATGGCTT-----------------------CTGCTGCTC--CACCTCAA---ATATCCATAT-GCTTTT--TGAGTCCTGGAAATGTGGCAT-CCAGATTCTCTCT i mm10.chr8 I 808 I 455 s canFam3.chr16 15776899 360 - 59632846 GCAAGTAG-AATGTGATCATGTTAATACTA-----CTTAGTTGCAAATGCCCACCTGCCCAGGCAGAGCTTTGGGGCCAATCCCTTCCCAAATGATATCAAGAATCCCCAGTGAGG-AGCAATTTACTCAGGAACATAGCTCTTAGTGTTCTTTTCTTC-----CAGATGCTTCTTGGAAGTTTGCTGTCCCCAAATCCTAAGCCTCTACTTTAT---GATGCTTCTGTCCT-GTT----------------------------TCTGTGTGGCTGGTCCCTGTGAAGTCACTTGGGCATCAAAACAGTACTTTTATTTTTGTCCCCAGTGCAATACTTGTGCTCAGAGCCTCATGACATCTTCAGGACACTCTTACAGCATCCTTCAGATGCAGGAC-TCA-------TCT i canFam3.chr16 C 0 C 0 a score=93395.000000 s hg38.chr4_KI270785v1_alt 112064 30 + 119912 AATACCTCCCATTTTTCTACTCTTGCCTTT s panTro4.chr4 190379828 30 + 193495092 AATACCTCCCATTTTTCTACTCTTGCCTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195355447 30 + 198332218 AATACCTCCCATTTTTCTACTCTTGCCTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111316658 29 + 115148730 AATACCTCCCATTTTTCTACTC-AACCTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181117498 30 + 184069350 AATACCTCCCATTTTCCTACTCTTACCATT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186455702 30 + 189454096 AATACCTCCCATTTTCCTACTCTTACCATT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176070443 30 + 178775436 AATACCTCCCATTTTTCTACTCTTACCGTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132912171 30 + 135778131 AATACCTCTCATTTTTCTACTCTTACCGTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188297694 30 - 190850796 AATACCTCCCATTTCTCTACTGTTGCCTTT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15777259 29 - 59632846 AATACTTCCCAGTTT-CTCCTCTGTCCTTT i canFam3.chr16 C 0 C 0 e mm10.chr8 84776466 455 - 129401213 I a score=5595518.000000 s hg38.chr4_KI270785v1_alt 112094 1509 + 119912 TACTCCTTCCTAGTCCCCAAAAGCCTCTTCGTTTTTCAAAAAA-TAATAA--AAGGCAGTCACAGAGGATAGTCGCAGAGGAG-G--GC--TGTTGTTCATTTGCCACC-TTGGAAAAAGCA-TTCATG-TTCCATCTTTGCCCAGCCAAGATAACCTTTTAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATTGGTCATCATTACTCTAATTAATCGCTTCTATTTGTAAGGGTGATGAGGTTTTGTACGGATTGGCCAAAATAGTCA----CCATTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCTATGTCTGAAGCCACACAGGAACGGA-TAGC----TTTAGTCTGTGGTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCT---GCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGTTGGCAGTCGATGGTCATTAAAAAA-CCTTCTT-GGAATGCTGTTACAGCAGTGGGCAGCCGTTACTGTCATGTTGAGAGT-GATAAAGGtagaatcatgggatttcaaaaatcaaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACTATCTGTCATTTTATACCCAATTTAAAAGCTTGTGACATCCTTCTACAAAATGAAAACATACAATCAAACCAGGCACTCTTGCTTGCCAAGGTCCTACATTTGGGCCTCACATGCTCATTCCATTTAACCATTGCACTGGCGAATGCAGCAGTAATTCCCAGCCATGACGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAGTCATTGACACAACCTCAAAAATAATTAACATTTTCATAGACAATTCCACAA-AATACTTTCACCAC-AGGGAATATTTTTCAGCAAAAGATGATGGTTAGGTAGATATAGCAGCTTCCCAAATAGTGGGATTCTTAGAGCACGGATAAAATCAGTTGAAAGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAAGGAATCCAATGTAGGAAAGCTTACTTTATATTTCCATGGATA-AATGCAATAACACTTACGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAAC--GGA-TTGCCTTATTGCCC-TGAATCATGTTAAGCCAGTCTTGGAACTTCGTGGCTC-CCAGTGGATCTCCAGCTCCTTACTGTTCCTGAGAGCCATCTGTTGTGTGTAGGTTTCCACTGGACCCGGCATAAATATTTACATGTGAGTTCATCTTGAGGTGGGATTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACGCATGGTTACTAATTTTATCTTTCT--------C-TGGTAT-------------------------------GTTTAG-CTGAAGCTGGCACATTGTTC--------------TTT-TTTTTTTCTAATCAATT--AAAATTTTAAAAATGGTGATCA-------------------------------AAGCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACAGTAAGAGCTCTTTCCTCAGGGGTTGAAAAATC-TCTATCTAAACAAATAAAGTGGTCATATGGTTTGAAAATAT s panTro4.chr4 190379858 1511 + 193495092 TACTCCTTCCTGGTCCCCAAAAGCCTCTTCGTTTTTCAAAAAAATAATAA--AAGGCAGAT-----GGATAGTCGCAGAGGAG-G--GG--TGTTGTTCATTTGCCACC-TTGGAAAAAGCA-TTCATG-TTCCATCTTTGCCCAGCCAAGATAACCTTTTAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATCGCTTCTATTTGTAAGGGTGATGAGGATTTGTATGGATTGGCCAAAATAGTCAGTCACCATTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCTATGTCTGAAGCCACACAGGAACGGA-GAGC----TTTAGTCTGTGGTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCT---GCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGTTGGCAGTCGATGGTCATTAAAAAA-CCTTCTT-GGAATGCTGTTACAGCAGTGGGCAGCCGTTACTGTCATGTTGAGAGT-GATAAAGGtagaatcatgggatttaaaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACTATCTGTCATTTTATACCCAATTTAAAAGCTTGTGACATCCTTCTACAAAATGAAAACATACAATCAAACCAGGCACTCTCGCTTGCCAAGGTCCTACATTTGGGCCTCACATGCTCATTCCATTTAACCATTGCACTGGCGAATGCAGCAGTAATTCCCAGCCATGACGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAGTCATTGACACAACCTCAAAAATAATTAACATTTTCGTAGACAATTCCACAA-AATACTTTCACCAC-AGGGAATATTTTTCAGTAAAAGATGATGGTTAGGTAGATATAGCAGCTTCCCAAATAGTGGGATTCTTAGAGCACAGATAAAATCAGTTGAAAGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAAGGAATCCAATGTAGGAAAGTTTACTTTATATTTCCATGGATA-AATGCAATAACACTTACGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAAC--GGA-TTGCCTTATTGCCC-TGAATCATGTTAAGCCAGTCTTGGAACTTCGTGGCTC-CCAGTGGATCTCCAGCTCCTTACTGTTCCTGAGAGCCATCTGTTGTGTGTAGGTTTCCACTGGACCCGGCATAAATATTTACATGTGAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACGCATGGTTACTAATTTTATCTTTCT--------C-TGGTAT-------------------------------GTTTAG-CTGAAGCTGGCACATTGTTCt------------tttt-tttttttctaatcaatt--aaaattttaaaaatGGTGATCA-------------------------------AAGCAC----------------------------------------------------------------------------------------------TGGCAGTCAGTGAGAG-CCTAGACAGTAAGAGCTCTTTCCTCAGGGGTTGAAAAATC-TCTATCTAAACAAGTAAAGTGGTCATATGGTTTGAAAATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195355477 1514 + 198332218 TATTCCTTCCTAGTCCCCAAAAGCCTCTTCGTTTTTCAAAAAA-TAATAA--AAGGCAGAT-----GGATAATTGCAGAGGAG-G--GG--TGTTGTTCATTTGCCACC-TTGGAAAAAGCA-TTCATG-TTCCATCTTTGCCCAGCCAAGATAACCTTTTAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATCGCTTCTATTTGTAAGGGTGATGAGGATTTGTACAGATTGGCCAAAATAGTCAGTCACCATTAAGAAATGCTTTTT----CT----GTTCAGCTAAAACCCTATATCTGAAGCCACACAGGAACGGA-TAGC----TTTAGTCTGTGGTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCTCAAGACTTTTTCTGGGCCAGTGACACGGAAAATGATAGTTGGCAGTCGATGGTCATTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGGGCAGCCGTTACTGTCATGTTGAGAGT-GAAAAGGatagaatcatgggatttcaaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACTATCTGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACAAAATGAAAACATACAACCAAACCAGGCACTCTTGCTTGCCAAGGTCCTGCATTTGGGCCTCACATGCTCGTTCCATTTAACCATTGGACTGGCAAATGCAGCAGTAATTCCCAGCCACGATGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAATCATTGACACAACCTTAAAAATAATTAACATTTTCGTAGACAATTCCACAA-AATACTTTCACCAT-AGGGAATATTTTTCAGTAAAAGATGATGGTTAGGTAGATATAGCAGCTTCCCGAATAGTGGGATTCTTAGAGCACGGATAAAATCAGTTGAAGGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAGGGAATCCAATGTAGGAAAGTTTACTTTATATTTCCGTGGATA-AATGCAATAACACTTACGTTTCTGAAAATTCTATCAGCGTG-CCAACTTCATTTCCAGTCCAAC--CGA-TTGCCTTATTGCCC-TGAATCATGTTAAGCCAGTCTTGGATCTTCGTGGCTC-CCAGTGGATCTCCAGCTCCTTACTGTTCCTGAGAGCCATCTGTTGTGTGTAGGTTTCCACTGGACCTGGCATAAATATTTACATGTGAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACGCATGGTTACTAATTTTATCTTTCT--------C-TGGTAT-------------------------------GTTTAG-CTGAACCTGGCACATTGTTCt------------ttttatttttttctaatcaatt--aaaaaattaaaaatGGTGATCA-------------------------------AAGCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACAGTAAGAGCTCTTTCCTCAGGGGTTGAAAAATC-TCTATTTAAACAAATAAAGTGGTCATATGGTTTGAAAATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111316687 1501 + 115148730 TACCCCTTCCTAGTCCCCAAAAGCCTCTTCGTTTTTCAAAAAA-TAATAA--AAGGCAGAT-----GGATAGTTGCAGAGGAG-G--GG--TGTTGTTCATTTGCCACT-TTGGAAAAAGCA-TTCATG-TTCCATCTTTGCCCAGCCAAGATAACCTTTTAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATGGCTTCTATTCGTAAGGGTGATGAGGATTTGTATGGATTGGCCAAAATAGTTAGTCACTGTTAAGAAATGCTTTGT----CT----GTTCAGCTAAAACCCTATGTCTGAAGCCACACAGGAACGGA-----------TAGTCTGTGGTTCTAATGCCTCATTTT-CTATGAATTCCAAATGGACCTCAAGCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGTTGGCAGTCGATGGTCATTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGTGCAGCCGTTACTGTCATGTTGAGAGT-GAAAAAGGtagaatcatgggatttcaaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACTATCTGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACAAAATGAAAACATACAATCAAACCAGGCACTCTTGCTTGCCAAGGTTCTGCATTTGGGCCTCACATG------CCATTTTACCATTGCACTGGCGAATGCAGCAGTAATTCCTAGCCACGATGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAATCATTGACACAACCTCAAAAATAATTAACATTTTCGTAGACAATTCCACAA-AATACTTTCACCAT-AGGGAATATTTTTCAGTAAAAGATGACAGTTAGGTAGATATAGCAGCTTCCCAAATAGTGGGATTCTTAGAGCATGGATAAAATCAGTTGAAGGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAGGGAATCCAATGTAGGAAAGTTTACTTTATATTTCCATGGATA-AATGCAATAACACTTACGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAAA--GGA-TTGCCTTATTGCCC-TGAATCATGTTCAGCCAGTCTTGGATCCTCATGGTTC-CCAGTGGATCTCCAGCTCCTTACTGTTCCTGAGAGCCATCTGTTGTGTGTAGGTTTCCACTGGACCTGGCATATATA-TTACATGTGAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACGCATGGTTACTAATTTTATCTTTCT--------C-TGGTAT-------------------------------GTTTAG-CTGAAGCTGGCATATTGTTCT------------TTTTTTTTTTTTCTAATCAATT--AAAATTTTAAAAATGGTGATCA-------------------------------AAGCAC----------------------------------------------------------------------------------------------TGGTAGTCAGTGAAAG-CCTAGAAAGTAAGAGCTCCTTCCTCAGGGGTTGAAAAATC-TCCATCTAAACAAATAAAGTGGTCATATGGTTTGAAAATAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181117528 1508 + 184069350 TAGTCCCTCTTAGTGCCCAAAAGCCTCTTTGTTTTCCAAAAAA-TAATAA--AAGGCAAAT-----GGATAGTTGCAGAGGAG-T--GG--TGTTGTTCATTTGCCACC-TTGGGAAAAGCA-TTCATG-CTCCACCTGTGCCCAGCCAAGATAACCTTTCAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATCACTTCTATTTGTAAGGGTGATGAGGATTCGTATGGATTGGCCAAAATAGTTAGTCACCGTTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCCATGTCTGAAGCCACACAGGAACGGA-TAGC----TTTAGTCTGTGCTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCTCAAGCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGCTGGCAGTCGATGGTCGTTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGGGCAGTTGTTACTGTCATGTTGAGAGT-GAAAAAGGtagaatcatgggatttcgaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACCATCTGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACGAAAGGAAAACATATAATCAAACCAGGCACTATCGCTTGCCAAGGTCCCGCGTTTGGGCCTCACATGTTCATTCCATTCAGCCTTTGCACTGGTAAATGCAGCAGTGACTCCCAGCCACGACGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAATCATTGACACCACCTCAAAAATAATTAACATTCTAGTAGGCAATTCCACGA-AATACTTTCACCAT-AGGGAATATTTTTCAGTAGAAGATGATGGTTAGGTAGATACAGCAGCTCCCCAAATAGTGGGATTCTTAGAGCACGGATAAAATCAGTTGCAGGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAGGGAATCCGATATAAGAAAG-----TTTATATTTCCATGGATAAAATGCAATAACACTTATGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAACTGGGATTTGCCTTATTGCCC-TGAATCATGTTAAGGCAGCCTTGGATCTTCATGGCTC-CCAGTGGATCTCCAGCTCCTTACCGTTCCCGAGAGCCATCTGTCATGTGTAGGTTTCCGCTGGACCTGGCATAAATATTTACACATAAGTTCATCTTGAGGCGGGATTGTGCCTAATAAACCCCTGGGATTCTGTACTACCCCACACATAGTTACTAATTTTATTTTTCT--------C-CAGTAT-------------------------------GTTTAG-CTGAAGCTGGCACATTGTG----------------Gt-tttttttttaattaatt--aaaactttaaaaatGGTGATCA-------------------------------AACCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACGGTAAGAGCTTTTTCCTCAGGGGTTGAAAAATC-CCTATCTAAACAAATAAAGTGGTCTTATGGCTTGAAAATAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186455732 1509 + 189454096 TAGTCCCTCTTAGTGCCCAAAAGCCTCTTTGTTTTCCAAAAAA-TAATAA--AAGGCAAAT-----GGATAGTTGCAGAGGAG-T--GG--TGTTGTTCATTTGCCACC-TTGGGAAAAGCA-TTCATG-CTCCACCTGTGCCCAGCCAAGATAACCTTTCAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATCACTTCTATTTGTAAGGGTGATGAGGATTCGTATGGATTGGCCAAAATAGTTAGTCACCGTTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCCATGTCTGAAGCCACACAGGAACGGA-TAGC----TTTAGTCTGTGCTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCTCAAGCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGCTGGCAGTCGATGGTCGTTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGGGCAGTTGTTACTGTCATGTTGAGAGT-GAAAAAGGtagaatcatgggatttcaaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATGTAACCATCTGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACGAAAGGAAAACATATAATCAAACCAGGCACTATCGCTTGCCAAGGTCCCGCGTTTGGGCCTCACATGTTCATTCCATTCAGTCTTTGCACTGGTAAATGCAGCAGTGACTCCCAGCCACGACGGACAAAAATCCCAGGTGCATTTTTGACTCTAGTCATGAAATCATTGACACCACCTCAAAAATAATTAACATTCTAGTAGGCAATTCCACGA-AATACTTTCACCAT-AGGGAATATTTTTCAGTAGAAGATGATGGTTAGGTAGATACAGCAGCTCCCCAAATAGTGGGATTCTTAGAGCACGGATAAAATCAGTTGCAGGCT--GAA---AAAATATCTTGAA----TGGGCAAGGAAGAGGGAATCCGATATAAGAAAG-----TTTATATTTCCATGGATAAAATGCAATAACACTTATGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAACTGGGATTTGCCTTATTGCCC-TGAATCATGTTAAGGCAGCCTTGGATCTTCATGGCTC-CCAGTGGATCTCCAGCTCCTTACCGTTCCCGAGAGCCATCTGTCATGTGTAGGTTTCCGCTGGACCTGGCATAAATATTTACACGTAAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGGATTCTGTACTACCCCACACATAGTTACTAATTTTATTTTTCT--------C-CAGTAT-------------------------------GTTTAG-CTGAAGCTGGCACATTGTG---------------TTT-TTTTTTTTTAATTAATT--AAAACTTTAAAAATGGTGATCA-------------------------------AACCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACGGTAAGAGCTTTTTCCTCAGGGGTTGAAAAATC-CCTATCTAAACAAATAAAGTGGTCTTATGGCTTGAAAATAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176070473 1512 + 178775436 TAGTCCCTCTTAGTCCCCAAAAGCCTCTtcgtttttcaaaaaa-taataa--aaggcaaat-----gGACAGTTGCAGAGGAG-T--GG-----TGTTCATTTGCCACC-TTGGGAAAAGCA-TTCATG-CTCCACCTTTGCCCAGCCAAGATAACCTTTCAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGGCACCA-AAGATCGGTCATCATTACTCTAATTAATCACTTCTATTTGTAAGGGTGATGAGGATTCGTATGGATTGGCCAAAATATTTAGTCACCATTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCCATGTCTGAAGCCACACAGGAACGGA-TAGC----TTTAGTCTGTGCTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCTCAAGCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGCTGGCAGTCGATGGTCATTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGGGCAGTTGTTACTGTCATGTTGAGAGT-GAAAAAGGTAGAATCATGGGATTTCAAAAATCGAAGGGaacttagaaataattttgttcaaCTCCCTTGTCTTATAGATAAAAGTAGTCATATAACTATCTGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACGAAAGGAAAACATATAATCAAACCAGGCACTATCGCTTGCCAAGGTCCCGCGTTTGGGCCTCACATGTTCATTCCATTCAGCCTTTGCACTGGCGAATGCAGCAGTGACTCCCAGCCACGACGGACAAAAATCCCAGGTGCATTTTTTACTCTAGTCATGAAATCATTGACAccacctcaaaaataattaacattctAGTAGGCAATTCCACGG-AATACTTTCACCAT-AGGGAATATTTTTCAGTAGAAGATGATGGTTAGGTAGACACAGCAGCTCCCCAAATAGTGGGATTCTTAGAGCATGGATAAAATCAGTTGCAGGCT--GAA---AAAATATCTTGAA----TGAGCAAGGAAGAGGGAATCCGATATACGAAAG-----TTTACATTTCCATGGATAAAATGCAATAACACTTACGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAAC--GGATTTGCCTTATTGCCC-TGAATCATGTTAAGGCAGCCTTGGATCTTCATGGCTC-CCAGT-GATCTCCAGCTCCTTACCGTTCCCAAGAGCCATCTGTCATGTGTAGGTTTCCACTGGACCTGGCATAAATATTTACACGTAAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACACATagttactcattttatttttct--------c-cagtat-------------------------------gTTTAG-CTGAAGCTGgcacactgttttattttt------cttt-tttttttctaattaatt--aaaactttaaaaatggtgATCA-------------------------------AACCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACAGTAAGAGCTTTTTCCTCAGGGGTTGAAAAATC-CCTATCTAAACAAATAAAGTGGTCTTATggcttgaaaatat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132912201 1522 + 135778131 GAGTCCCTCTTAGTCCCCAAAAGCCTCTTCGTTTTCCAAAAAA-CAATAA--AAGGCAAAT-----GGATAGTTGCAGAGGAG-T--GG--TGGTGTTCATTTGCCACC-TTGGGAAAAGCA-TTCATG-CTCCACCTTTGCCCAGCCAAGAAAACCTTTCAGGAATATTTTGACATGCATTTTACTTTCTGGGAACTGACACCA-AAGATCGGTCATCATTACTCTAATTAATCAGTTCTATTTGTAAGGGTGATGAGGATTCGTATGGATTGGCCAAAATAGTTAGTCACCATTAAGAAATGCTTTCT----CT----GTTCAGCTAAAACCCCATGTCTGAAGCCACACAGGAATGGA-TAGC----TTTAGTCTGTGCTTCTAATGCCTCATTTT-CTATAAATTCCAAATGGACCTCAAGCCTTTTTCTGGGCCAGTGACACGGAAAATGATAGCTGGCAGTCGATGGTCATTAAAAAA-CATTCTT-GGAATGCTGTTACAGCAGTGGGCAGTTGTTACTGTCATGTTGAGAGT-GAAAAAGGtagaatcatgggatttcaaaaatcgaagggaacttagaaataattttgttcaactcccttgtcttatagataaAAGTAGTCATATAACTATCCGTCATTTTATACCCAATTTAAAAGCTTGTGATATCCTTCTACGAAAGGAAAACATATAATCAAACCAGGCACTATCGCTTGCCAAGGTCCCGCGTTTGGGCCTCACATGTTCATTCCATTCAGCCTTTGCACTGGCAGATGCAGCAGTGACTCCCAGCCACGACGGACAAAAATCCCAGGTGCATTTTTTACTCTAGTCATGAAATCATTGACACCACCTCAAAAATAATTAACATTCTAGTAGGCAATTCCACGA-AATACTTTCAGCAT-AGGGAATATTTTTCAGTAGAAGATGATGGTTAGGTAGATACAGCAGCTCCCCAAATAGTGGGATTCTTAGAGCACGGATAAAATCAGTTGCAGGCT--GAA---AAAATATCTTGAA----TGAGCAAGGAAGAGGGAATCCGATATAAGAAAG-----TTTATATTTCCATGGATAGAAAGCAATAACACTTACGTTTCTGAAAATTCTATCAGCATG-CCAACTTCATTTCCAGTCCAAC--GGATTTGCCTTGTTGCCC-TGAATCATGTTAAGGCAGCCTTGGATCTTCATGGCTC-GCAGTGGATCTCGAGCTCCTTACCGTTCCCGAGAGCCATCTGTCATGTGTCGGTTTCCGCTGGACCTGGCATAAATATTTACACGTAAGTTCATCTTGAGGCGGGATTATGCCTAATAAACCCCTGGAATTCTGTGCCACCCCACACATAGTTACTAATTTTATTTTTCT--------C-CAGTAT-------------------------------GTTTAG-CTGAAGCTGGCACACTGtttttttttttttttctttt-tttttttctAATTAATT--AAAACTTTTAAAATGGTGATCA-------------------------------AACCAC----------------------------------------------------------------------------------------------TGGTGGTCAGTGAGAG-CCTAGACAGGAAGAGCTTTTTCCTCAGGGGTTGAAAAATC-CCTGTCTAAGCAAATAAAGTGGTCTTATGGCTTGAAAATAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188297724 1637 - 190850796 TACTACCTCCTATTTCCCCAAACACTCTTCATTTTTCAAAAAA-TAATAT--AAGGCAGAT-----GAATAGTTACAGAGGAGAG--GG--TGTTATTCATTTGCCACC-TTGGAAGAAGCAGTTCATG-TTCCATCTTTGCTCAGCCAAGATAACCTTTCAGGAATATTTTGACATGTGTTTTATTTTCTGAGAACTGGCAGAA-AAGATCGGTCATCGTTACTCTAATTAATCACTTCTATTTGTAAAGGTGATGAGGATTTGTGTGGATTGGCCAAAATACTGAGTCACCATCAAGAAATGCTTTCTTTAGTT----ATTCAGCTAAAACCCCACGTCTGAAGCCACACAGGAGTGGA-TAGC----TTTAGTCTGTGCTTCTAATGCCTCACTTT-CTATAAATTCCAAATAGACCTCAAGGCTTTTTCTGGGCCAGTGACATGGAAAATGATAGTTGGCAGTTGGTGGTCATTAAAAAA-CATTCTT-GAAATGCCGTTGTGGCAGTGGGCAGCCATTACTGTCATATTGAGAGT-GAAAAAGGtagaatcatggtattttgaaaatggaa-ggaatttggaaataatcttgttcaactccctcatcttatagataaAAGTAGTCATGTAACTATTTGTCATTTTATACCCAACTTAAAAGCTTGTGATATCCTTCAACAAAATGAAAACATACAATCCAAGCAGGTACTGCCGCTTGCCAAGGTCCTGTATCTGGGCATCAGGTGCTCATGCCATTTAACCATCACACTGGTGTATGCAGCAGTAATTCCCATCCACGAGGGACAAAAATCCCAGTTGCATTTTTGACGCTAGTCAGGACGTTATTAAAACTACCTCAAAAAAAGTTAACATTTTAGTAGAGAATTCCACAA-AATACTTTC--------GGAATATTTTTTAGTAGAAGATT-TGGTTAGGTAGATACAGCCGCTCCCCAAATAGTGGAATATTTAGAGCACTGATAAAATCAGTT-AAGGCCAAAAA---AAAATATCTTGAC----TGGGCAAGGAAGAGGGAATCCAATATGAGAAAGTTTACTTTACATTTCCATGGATAAAATGCAATAACGTTTACATTTCTGAAAATTCTCTCGGCATG-TCAGCTTCACTTCCGGTTCCAC--TGA-TTACCTCCTTATCC-TGAATCTTGTAAAGCCAACCTCGGATCTTCGTGGCTC-CCAGTGGATTTCCAGCTTTTCACCATTCCTGAGAGCCATGTGTTGTGTGTAAGTTTCCTATGGAGCCGGCACAAATATTTACAAGTGAGTTCATCTTGAGGAGGGAGTATGCCTAATAAACCCCTGGAATTCTGTACCACCCCACACGT--TTACTAATTTTATTTTTCTCTTTTCTCC-TGGTAT-------------------------------GTTTAG-CTGAAGCTGGCACACTGTT-------------------TTCTTTCCTAATTAATT--AAAACTTTAAAAACGGTGATCAGCctgggcgtggtggctcacacctgtaatccaagcactttggaggccaaggcgggcagatcacctgaggttgggagttcaagaccagcctgaccaacatagtgaaaccccttctttataaaaaaaaaaaaGTGGTGGTCAGTGAGAG-CCTAGACAATAAAAGCTCTTTCCTGAGGGGCTGGAAAATC-TCTATCTAAACAAGTAAAGTGATCATATGGTTTGAAAATAT i calJac3.chr3 C 0 C 0 s mm10.chr8 84776921 1477 - 129401213 TACTCTCTTTTCCTCCCTTGAAGATCCTGTCCTTTCCTAAGA--CAACAATTAGGGCATTT-----GGA-ACCTTTATAGGAG-GCCAG--AATTGTTCATCTGGCACC--TATGAAAAGCA-TTCACACCCCCATCTTTGCCCAGGAAAGAGAAACTCGTTGGAATATTTTGAGATGCATTTTACTTTCTGAGAGTTGGCAGGAGAAAATCAATTACCCCTACCTCAATCAATCCCTTCTGTTTGTGAGAATA--------TGGTATGGTTTGGCCAAAGT--TGAACCCCTATT-AGAAATG----------TT----ATT-AAATAAAAGTCCAACTCTGAA---ACAGAGAAAAAAAATTCC----TTTAGCTGGTGCTTCATATACCTCACGTTATTATAAACAACAATGCTTCCCC---------CCTGATTCCATGACACGGAAAATAATACTTGGCAATTGATGGTCATTAAAAAAGCATTCTG-GAAGTATTGCTGTAGCTTAGGGTGGCCATTAATGTCAGGTTGTGCA--GAGAAGGGtagaatcagagtattttaaaaatggaagggaacttagaaataattttgttcaactccctggt-ttGTAGATTAAAGTAGTCATGGAGCAATTTGTCATTTTATACCCAATTTAGAAGCTTGCAGTATTATTCTGTAAAATGAAAACATACAATCAAATAAGGTGCTGTGGCTTACAGAGATCCTTTATTTGAACAGCATATGT--ATTCTATCT---------ACCGGTGGAT-CTGTGGCAACTCCTATCCTTGATATGCAGTAATCTCCAGTGCATTTTAGACTCTATTAATGAAATTATTGAACCGTCCTAAAATGTAATTCACATTTTAATAAAGAATTCAACAAGAATACCTTCATCGTAAGGGAATGTTTTGCAATAAAATAAGA---TTAGGTAGATAGATCAGTTCCGAAAATACTGCAATTCCTGGAACACCGATAAAATTAGTTGAAAATT--GAAAAGAAGAAATCTTGAAAGTCTAAGAAAAAAAAAAGAAATCAAAGATATGAAAGTTTACTTTATATCTCCATGGATAACGTGCGATAATATTTAAGTTTCTGAAAATTACATCAGGATGTTCAGTTTCATTTCCTAGTCAAT--GGA-CGGCCTTGTTCCCT-GGTGTTCTATTAAATCAGCTTTGGATCTTCATGGCCCTCCAAGGAACTTCTAACTCTTTACCCTTCCTAAGAGCCATCTGTTGCATGGAAGTTCCCCCTGGGCCTAACATAAATATTTACATGTGAGTTCATTTAGGGGAGGGAGTGTGCCTAATAAATCGCC-GAATTCTGTCCTGCCCAATGTGTAGTTAC--AGTTTATTTTTCT--------CAAGGTAC-------------------------------CACCAGCCTGAAGCTAACACAGTGAT-------------------TCTTTTTCTAATTAGTT--CAACCATCTAAACAGGTGATAA-------------------------------AAACCC----------------------------------------------------------------------------------------------TTGTGGTCATTGAGTGCCCTAGATGGCCAGAAC--CTTCCTGAGGGGTTGAAAGATCGCTTATCTAAACAAATAAAGTGGTCATATGGATTGAAAATAT i mm10.chr8 I 455 C 0 s canFam3.chr16 15777288 1536 - 59632846 CACTCCCTTCTAGCTTCAAAAAGCTTCTCCATTTTCCAGAAAA-TATTAC--AAGACAAAT-----GAATACTTGCAGAGGAG-A--AGAATGTTGTTCCTCTGCCATCACTGAAAAAAACA-TTCATG-TTGCAGCTTCACTCTGTGGAGACAACTTTTCAGGAATATCTTGAGATACATTTTACTTTCTG--------------AAGATGGGTCATCGTTACTCTAATCATTCACTTCTGTTTGTAAGGATGATGGAAGTCTTTGTGGTTTGGCCAAAATATTGAGACTCCATTAAGATATGGCTCCT----CTAGTCATTCAGATAAAAACC-ATCTCTAAAGTAACTTCCAAAAGGA-AAACTGTGTTTTGTCTCTGCTTCTAGTGCCCCACTTT--TATAAGTTCCAAATGGACCTCAAGACTTTTTCTGGGCCATTGACATGGAAAATGATAGTTGACAGTCTGTGGCCATTAAAAAG-CATTCTTGGGAGTGCTGTCATGGCATTGGGCAGCCATTACTGTCATGTTGTGGGTAAAAAAAGGtaaaatcatggtattttaaaaatggaaggggacttggaaataattttgttcaactcccttgtcttacagataaAAGTAGTCATGTAACAATTTGTCATTTTATACCCAATTTGGAATCTTGCAATATTCTTCTATAAAATGAAAACATACAATCAAATAAGGTGTTATTCCTTGCAGAGACACTTGATTTGGGCATCACATTTCTATTCCATGTAACCACTGCACTGCTATATACTGTGGTAATTCCCATCCTTGATTTATAACAACCCCAGGTGCATTTTAGACTCCATCCATGAAATTACTGAAAC-ACCTCAAAAATAATTCACATTTTAGTAAAGAATTCCACAA-AATTCTTTCACAGTAGGGGAGTATTTCACAGTCAAATAAGA---TTAGGAAGATAAAGCAGCTTCTAAAATAGTGGAATTCTTAGAGCACTGATAACATTAGTAGAAAGCT--AAA---TGAATATCATGAA----TGGATAAGGAGGAGGAGACCAAAGATAAGAAAATGTACTTTATGTTTTCATGGATA-AATGCAATAACATTTAAGTTTCTGAAAATTCTCTCAGGATGTTCAAATTCATTTCCAACTCAAC--TGA-TTGCCTAGTTCCCCTTGTATCACATTATATCAGCCTTGGATCTTCATGGCTCCCCAGTGAATTTCCAGTTCCTTGCCCTTTAGAAGAGCCATCTGCTGTATG--AGTTCCCACTGGGTCTGACATAAACACTGATGTGTGAGTTCATCCTGAGGAGGGATAGTGTCTACTAAGTCCTTGGAACCTGGTGCCACCCAACATGTGGTTATTATGCTTATTTTTCT--------CAAGGCATCTTCTCTGACAAAGGTTATATTACAGGGCCAGTTTAG-CTGAAGCTGGCACACTA---------------------ATTTTATCTAATTAATTGAAAAACATTTAAAGTGGTGATTA-------------------------------AAGCAT----------------------------------------------------------------------------------------------TGGTGGTCATTGAGAGCCCTAGATGATAAGAGCTCTTTTCTCAGGGGTTGAAAAATC-TCTATTTAAACAAACAAAATGGCCACAGGAATTGAAAATAT i canFam3.chr16 C 0 C 0 a score=543404.000000 s hg38.chr4_KI270785v1_alt 113603 188 + 119912 TTATAGAGGggccggccatggtggctcacgcctgtaatcccagaacttcgggaggccaaggctggcagattgcttgaggccaggagtttgagaccagcctggccaaaatgg--tgaacccccatctttactaaaaatacaaaaattagccaagtgtggtggcgcatgcttgtagtctcagctactctgga s panTro4.chr4 190381369 188 + 193495092 TTATGGAGGggccggccatggtggctcatgcctgtaatcccagaacttcgggaggccaaggctggcagattgcttgaggccaggagtttgagaccagcctggccaaaatgg--tgaacccccatctttactaaaaatacaaaaattagccaagtgtggtggcacatgcttgtagtctcagctactctgga i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195356991 188 + 198332218 TTATAGAGGggccggccatggtggctcatgcctgtaatcccagaacttcgggaggccaaggctggcagattgcttgaggccaggagttcgagaccagccttgccaaaatgg--tgaacccccgtctttactaaaaatacaaaaattagccaagtgtggtggcacatgcttgtagtctcagctactctgga i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318188 188 + 115148730 TTATAGAGGggccgggcatggtggctcacgcctgtaatcccagaacttcgggaggccaaggctggcagattgcttgaggccaggagttcgagaccagcctggccaaaatgg--tgaacccccatctttactaaaaatacaaaaattagccaagtgtggtggcacatgcttgtagtctcagctactctgga i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119036 190 + 184069350 TTATAGAGGggccgggcatggtggcttacacctgtaatcccagcactttgggaggacagggctggcaggtcacttgaggccgggagttcgagaccagcctggccaacatgggtgacacccccatctttactgaaaatacaaaaattaggcaggtgtgctggcgcatgcctgtagtctcagctactctgga i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457241 190 + 189454096 TTATAGAGGggccgggcatggtggcttacacctgtaatcccagcactttgggaggacagggctggcaggtcacttgaggccgggagttcgagaccagcctggccaacatgggtgaaacccccatctttactgaaaatacaaaaattaggcaggtgtgctggcgcatgcctgtagtctcagctactctgga i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176071985 190 + 178775436 ttatagaggggccgggcatggtggcttacacctgtaatcccagcactttgggaggacagggctggcaggtcacttgaggccaggagttcgagaccagcctggccaacatgggtgaaacccccatctttactgaaaatacaaaaattaggcaggtgtgctggcgcatgcctgtagtctcagctactctgaa i papAnu2.chr5 C 0 M 374 s chlSab2.chr7 132913723 190 + 135778131 TTATAGAGGggccgggcatggtggctcacacctgtaatcccagcactttgggaggacaaggctggcaggtcacttgaggccgggagttcgagaccagcctggccaacatgggtgaaacccccatctttactgaaaatacaaaaattaggcaggtgtggtggcgcatgcctgtagtctcagctattctgga i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188299361 189 - 190850796 TTACATAGGggccatgcatggtggctcaagcgtgtattcccagcacttcaggaagccaaggctggcagatcacttgaggccaggagttcaagaccagcctggctaacatgg-tgaaatccccatctctactaaaaatacaaagattagccaggtgtaatggcgtgtgcgtgtagtctcggctactctgga i calJac3.chr3 C 0 C 0 e canFam3.chr16 15778824 0 - 59632846 C e mm10.chr8 84778398 0 - 129401213 C a score=223770.000000 s hg38.chr4_KI270785v1_alt 113791 117 + 119912 ggctgaggcactagtatagcttgaactcgggagatggcggttgcagtgagccgcggtcac-ccccgcactccagcctgggcgacagagcaagactctgtctc----aaaaaa---------------------------------------------------------------------aTGTATATAT s panTro4.chr4 190381557 117 + 193495092 ggctgaggcacttgtatagcttgaactcgggagatggaggttgcagtgagctgaggtcac-ccccgcactccagcctgggtgacagagcaagactctgtctc----aaaaaa---------------------------------------------------------------------aTGTATATAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195357179 122 + 198332218 ggctgaggcactagtatagcttgaactcgggagatggaggttgcagtgagtcaaggtcgc-ccctgcactccagcctgggcgacagagcaagaatctgtctc----aaaaaaaTTG----------------------------------------------------------------TATATATATAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318376 186 + 115148730 ggctgaggcactagtatagcttgaactcgggagatggtggttgcagtgagccgaggttgc-ccctgcactccagcctgggtgacagagcaagactctgtctc----aaaaaaaaTGTGtatatatatatatatatatatatatatatatatatatgtgtatatatatatatatatatatatatatatatat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119226 119 + 184069350 ggccaaggcactagaatagcttgaacttgggagatggaggttacagtgagccgaggtcgccccctgcactccagcctgggcgacagagcaagattctgtctc----aaaaaaa--------------------------------------------------------------------aaaaaaaTGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457431 123 + 189454096 ggccaaggcactagaatagcttgaacttgggagatggaggttacagtgagccgaggtcgccccctgcactccagcctgggcgacagagcaagattctgtctcaaaaaaaaaaa--------------------------------------------------------------------aaaaaaaTGT i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132913913 120 + 135778131 ggccaaggcactagaatagcttgaacttgggagatggaggttacagtgagccaaggtcgctccctgcactccagcctgggcgacagagcaagattctgtctc---aaaaaaaa--------------------------------------------------------------------aaaaaaaTGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188299550 118 - 190850796 ggctgaggcactagaatagcctgaacccaggagtcagaggttgtagtgagctgaggtcgccccctgcactccagcctgggcaacagagcaagactttgtctc----aaaaaa---------------------------------------------------------------------aTGTATATGT i calJac3.chr3 C 0 I 56 e canFam3.chr16 15778824 0 - 59632846 C e mm10.chr8 84778398 0 - 129401213 C e papAnu2.chr5 176072175 374 + 178775436 M a score=394442.000000 s hg38.chr4_KI270785v1_alt 113908 235 + 119912 CTATATATACTgccgggcatggtgactcatgtctgtaatgccagcactttgggaggccaaggtgggtggttcacttgaggtcaggagctcgagaccagcctgaccaatatggcgaaaccccatctccactaaaaaatac--aaaattagctgggcgtggtggtgcaagcctgtaatcccagcaactctggaggctgaggcaggagaattgcttgaactcgggaggtggtgaactgag s panTro4.chr4 190381674 235 + 193495092 CTATATATACTgccgggcatggtgactcacgcctgtaatgccagcagtttgggaggccaaggtgggtggttcactagaggtcaggagctcgagaccagcctgaccaatatggcgaaaccccatctccactaaaaaatac--aaaattagctgggcgtggtggtgcaagcctgtaatcccagctactctggcggctgaggcaggagaattgcttgaactcgggaggtggtgaactgag i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195357301 235 + 198332218 ATGTATATACTgccgggcatggtgactcacgcctgtaatgccagcactttgggaggccaaggtgggtggttcacttgaggtcaggagttcaagaccagcctgaccaatatggtgaaactccatctccactaaaaaatac--aaaattagctgggcgtggtggtgcaagcctgtaatcccagctactctggaggctgaggcaggagaattgcttgaacttgggaggtggtgaactgag i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318562 234 + 115148730 atatatatatTgctgggcatggtgactcacgcctgtaatgccagcactttgggaggccaaggtgggtggttcacttgaggtcaggatttggagaccagcctgaccaatatggtgaaac-ccatctccactaaaaaatac--aaaattagctgggcgtggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaattgcttgaacttgggaggtggtgaactgag i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119345 237 + 184069350 ATATATATACTgccgggcatggggactcacacctgtaattccagcactttgggaggccaaggtggatggatcacttgaggtcaggagtttgagaccagcctgaccaatatagtgaaaccctgtctccactaagacataaaaaaaattagccagacttggtggtacaagcctgtaatcccagctattctggagactgaggcaggagaattgcttgaactcgggaggtggagggtgcag i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457554 237 + 189454096 ATATATATACTgccgggcatggggactcacacctgtaattccagcactttgggaggccaaggtggatggatcacttgaggtcaggagtttgagaccagcctgaccaatatagtgaaaccctgtctccactaagacataaaaaaaattagccagacttggtggtacaagcctgtaatcccagctattctggagactgaggcaggagaattgcttgaactcgggaggtggagggtgcag i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132914033 237 + 135778131 ATATATATACTgccgggcatggggactcacacctgtaatcccagcactttgggaggccaaggtggatggatcacttgaggtcaggagtttgagaccagcctgaccaatatagtgaaaccctgtctccactaagacataaagaaaattagccagacttggtggtacaagcctgtaatcccagctattctggagactgaggcaggagaattgcttgaactcaggaggtggaggttgcag i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15778824 0 - 59632846 C e mm10.chr8 84778398 0 - 129401213 C e calJac3.chr3 188299668 56 - 190850796 I e papAnu2.chr5 176072175 374 + 178775436 M a score=163085.000000 s hg38.chr4_KI270785v1_alt 114143 75 + 119912 tgaactgagattacgccactgcactccagcctgggcaacaagagcaaaactctgtctc----------------aaaaaaaaaaaaagaaa s panTro4.chr4 190381909 74 + 193495092 tgaactgagattacgccattgcactccagcctgggcaacaagagcaacactctgtctc-----------------aaaaaaaaaaaagaaa i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195357536 73 + 198332218 tgaactgagattacgccattgcactccagcctgggcaacaagagcaaaactctgtctt------------------aaaaaaaaaaagaaa i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318796 73 + 115148730 tgaactgagattatgccattgcactccagcctgggcaacaagagcaaaactctgtctc------------------aaaaaaaaaaagaaa i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119582 73 + 184069350 tgaactgagattacgccattgcactccagcctgggcaacaagagcaaaactccatctc------------------aaaaaaaaaaCGAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457791 73 + 189454096 tgaactgagattacgccattgcactccagcctgggcaacaagagcaaaactccatctc------------------aaaaaaaaaaCGAAA i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132914270 77 + 135778131 tgaactgagattacgccattgcactccagcctgggcaacaagagcaaaactccatctca--------------aaaaaaaaaaaaaCGAAA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188299724 91 - 190850796 tgaactgagattatgccattgcactccagcctgggcaacgagagcaaaactctgtcacaCACACAGAAaaaagaaaagaaaagaaaagaaa i calJac3.chr3 I 56 C 0 e canFam3.chr16 15778824 0 - 59632846 C e mm10.chr8 84778398 0 - 129401213 C e papAnu2.chr5 176072175 374 + 178775436 M a score=4095.000000 s hg38.chr4_KI270785v1_alt 114218 1 + 119912 T s panTro4.chr4 190381983 1 + 193495092 T i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195357609 1 + 198332218 T i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318869 1 + 115148730 T i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119655 1 + 184069350 T i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457864 1 + 189454096 T i macFas5.chr5 C 0 C 0 s chlSab2.chr7 132914347 1 + 135778131 T i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188299815 1 - 190850796 T i calJac3.chr3 C 0 C 0 s mm10.chr8 84778398 1 - 129401213 T i mm10.chr8 C 0 C 0 s canFam3.chr16 15778824 1 - 59632846 T i canFam3.chr16 C 0 C 0 e papAnu2.chr5 176072175 374 + 178775436 M a score=2158963.000000 s hg38.chr4_KI270785v1_alt 114219 562 + 119912 TATGTAATACTTTTTCCATGAGTCAAATTCAAATGATGGCGATCCACTGGCGTGATTGTAATGACACAGTTTAATCAAAGGCCGTCAAGGTACGTACAATTGACTAGAACCAACTTGATCATAG-TTAACTGAAGAATGTTGTGGTGGCTGTGTTCTTTGTCTTCCGAAGTTGACTTATGAAATCAA--AACAGTATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGACCATATTAAATGGAAAGATATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAAAGACCTTGTTCAATCCACAGGGTCTAGTATACAATGAAAGCATTGACCAACAGATAATTTATTACAGTGCGGTGGAATTAATTTTTGGTACATTGAA----TAT----------TTATTTTCCTCAGTGTGTTTTAAATTTCAGTTTTAGAAAAtttttgtgtgattatgaaattaatacatgttcagtgtagaaaattaggagaatatagaagaaaagataagggaaaaatcaaaagaaaa--tccaattctcaaaaatacccactat s panTro4.chr4 190381984 566 + 193495092 TATGTAATACTTTTTCCATGAGTCAAATTCAAATGATGGCGATCCACTGGCGTGATTGTAATGACACAGTTTAATCAAAGGCCGTCAAAGTACGTACAATTGACTAGAACCAACTTGATCATAG-TTAACTGAAGAATGTTGTGGTGGCTGTGTTCATTGTCTTCCGAAGTTGACTTATGAAATCAA--AACAGTATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGAACATATTAAATGGAAAGATATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGGGCCTAGTATACAATGAAAGCATTGACAAACAGATAATTTATTACAGTGTGGTGGAATTAATTTTTGGTACATTGAATATTTAT----------TTATTTTCCTCAGTGTGTTTTAAATTTCCATTTTAGAAAAtttttgtctgattatgaaattaatacatgttcagtgtagaaaattaggagaatataaaagaaaagataagggaaaaatcgaaagaaaa--tccaattctcaaaaatacctactat i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195357610 562 + 198332218 TATGTAATACTTTTTCCACGAGTCAAATTCAAATGATGGTGATCCACTGGCATGATTGTAATGACACAATTTAATCAAAGGCCATCAAG----GTACAATTGACTAGAACCAAATTGATCATAG-TTCACTGAAGAATGTTGTGGTGCCTGTGTTCATTGTCTTCTGAAGTTGACTTATGAAATCAA--AACAGTATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGACCATATTAAATGGAAAGATATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGGGTCTAGTATACAATGAAAGCATTGACCAACAGATAATTTATTATAGTGCAGTGGAATTCATTTTTGATACATTGAATATTTAT----------TTATTTTCCTCAGCGTGTTTTAAATTTCAATTTTAGTACAtttttgtctgattatgaaattaatacatgttcagtgtagaaaattaggagaatataaaagaaaagataagggaaaaatcaaaagaaaa--tccaattctcaaaaatacccactat i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111318870 558 + 115148730 TATGTAATACCTTTCCCATGAGTCAAATTCAAATGATGGCAATCCACTGGCGTGATTGTAATGACACAGTTTAATCAAAGGCCATCAGA----GTACAATTGGCTAGAACCAAACTGATCATAG-TTCACTGAAGAATGTTGTGGTGCCTGTGTTCATTGTCTTCTGAAGTTGACTTTTGAAATCAA--AACAGTGTTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGACCATATTAAATGGAAATATATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGGGTCTAGTATACAATGAAAACATTGACCAACAGATAATTTATTACAGTGCAGTGGAATTAATTTTTGGTACATTGAA----TAT----------TTATTTTCCTCAGTGTGTTTTAAATTTCAATTTTAGAAAAtttttgtctgattgtgaaattcatacatgttcagtgtagaaaattaggagaatatacaagaaaagataagggaaaaatcgaaagaaaa--tccaattctcaaaaatacccactat i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181119656 557 + 184069350 TATATAATACTTTTTCCATGAGTCAAATTCAAACGATGGTGATCCACTGGCATGATTGTAATGGCATGGTTTATGCAAAGGCCATCAAG----GTACAGTTGACTAGAACCAAATTGATCATAG-TTCACTGAAGAATGTTGTGGTGCCTGTGTTCATTGTCTTCTGAAGTTGACTTATGAAATCAA--AACAATATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGACACCATATTAAATAGAAAGATATTTTAAGCATTTATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGAGTCTAGTATACAATGAAAGCATTGGCCAACAGATAATTTATTTCAGTGTGGTGGAATTAACTTTTGGTACATTGAATATTTAT----------TTATTTGCCTCAGTGTGTTTTAAATTTCAATTTTAGAAAATGtttgtctgattatgaaattaatacacgttcattatagaaaattaggagaacataaaagaa-----aagggaaaaatcaaaagaaaa--tccggttctggaaaataaccactat i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186457865 562 + 189454096 TATATAATACTTTTTCCATGAGTCAAATTCAAACGATGGTGATCCACTGGCATGATTGTAATGGCATGGTTTATGCAAAGGCCATCAAG----GTACAGTTGACTAGAACCAAATTGATCATAG-TTCACTGAAGAATGTTGTGGCGCCTGTGTTCATTGTCTTCTGAAGTTGACTTATGAAATCAA--AACAATATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGACCATATTAAATAGAAAGATATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGAGTCTAGTATACAATGAAAGCATTGGCCAACAGATAATTTATTACAGTGTGGTGGAATTAACTTTTGGTACATTGAATATTTAT----------TTATTTGCCTCAGTGTGTTTTAAATTTCAATTTTAGAAAATGtttgtctgattatgaaattaatacacgttcattatagaaaattaggagaacataaaagaaaagataagggaaaaatcaaaagaaaa--tccggttctggaaaataaccactat i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176072549 562 + 178775436 TATATAATACTTTTTCCATGAGTCAAATTCAAACGATAGTGATCCACTGGCATGATTGTAATGGCATGGTTTATGCAAAGGCCATCAAG----GTACAGTTGACTAGAACCAAAttgatcatag-ttcactgaagAATGTTGTGGTGCCTGTGTTCATTGTCTTCTGAAGTTGACTTATGAAACCAA--AACAGTATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCTTTTGAGACCATATTAAATAGAAAGCTATTTTAAGCATTCATTTTGATGAATGGAGCATAGGTAATGACCTTGTTCAATCCACAGAGTCTAGTATACAATGAAAGCATTGGCCAACAGATAATTTATTACAGTGTGGTGGAATTAACTCTTGGtacattgaatatttat----------ttatttgcctcagtgtgttttaaatttcaattttagaaaatgtttgtcTGATTATGAAATTAATACACgttcattatagaaaattaggagaacataaaagaaaagataagggaaaaatcaaaagaaaa--tccggttctggaaaaTaaccactat i papAnu2.chr5 M 374 C 0 s chlSab2.chr7 132914348 563 + 135778131 TATATAATACTTTTTCCATGAGTCAAATTCAAACGATGGTGATCCACTGGCATGACTGTAATGGCATGGTTTATGCAAAAGCCATCAAG----GTACAGTTGACTAGAACCAAATTGATCATAATTTCACTGACGAAAGTTGTGGTGCCTGTGTTCATTGTCTTCTGAAGTTGACTTACGAAATCAA--AACAATATTCTCCTGGACATATTTAATAATGCATTCAAGCAGGCATTTTGCCAAATCCCTTTGAGACCATATTAAATAGAAAGATATTTTAAGCATTCATTTTGATGAATGGAGCACAGGTAACGACCTTGTTCAATCCACAGAGTCTAGTATACAATGAAAGCATTGGCCAACAGATAATTTATTACAGTGTGGTGGAATTAACTTTTGGTACATTGAATATTTAT----------TTATTTGCCTCAGTGTGTTTTAAATTTCAATTTTAGAAAATGtttgtctgattatgaaattaatacatattcattatagaaaattaggagaacataaaagaaaagataagggaaaaatcaaaagaaaa--tccggttctggaaaataaccactat i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188299816 555 - 190850796 TATAGAATGCTCTTTTCATCAGTCAAATTCAAATGATGGCGATCCACTGGTGTGATTGTAATGACATAGTTTATGCAAAGGCCATCGAG----GTACAGTTAACTAGAAGCGAACTGATTATAG-TTCGCTGAAGAATGTTGGGGTGGCTGTGTTCACTGTCTCCTGAAGCTGACTTGTGAAATCAA--AACAGTATCCTCCTAGACATATTTAATAATGCGCCCAAGCAGGCATTGTGCCAAATGCCTTTGAGGCCATATTAAATAGAAAGATATTTTAAACATTCATTTTGATGAATGGAATGTGGGTAATGACCTTGTTGAATATACAGCGTCTAGTGTACAATGAAAGCATTGACCAACAGATAATTTATTACAGTGGGATGGAATTAATTTTTGGTACATTGAATATTTAT----------TTATTTGCCTCAGTGTATTT----TTTCGATTTTAGAAAAtttttgtctcattgtgaaattaat--gtgttcattacagaaaattagaaaaa-atataaaaaaagataagggaaaaatcaaaagaaaa--ttcagttctgaaaaataaccactgt i calJac3.chr3 C 0 C 0 s mm10.chr8 84778399 568 - 129401213 TAGACAATGTTCTTCCCATGAGTCAAATTCAAAGGATGTAGCCCCTCGAGAGTGATTGTCTTGGCATGGTTTATGTCAAGGCCATCAAC----TTACCATTGACTTGAAGCAAACTGGTTATAA-ATTACT---GAATGCTGTGATATCCATTTTCATTGTCTTCAGAAGTTGGCTTATAAAAAAAATCAAGAGTTTTCCCCTGAATATAATTAATAATGCATTCAAGCTGGCATTTTGCCAGATTGCTTTGAGGCCATATTAAATAAAAAGATATTTTAAACATTCATTTTGATGAATGGCATGTGCATAATGACCTTGTGCAATCT--AGAGTCAAATCTGAGGTAAAAGCATTGACTAACAGATAATTTATCATGTTGAGGTGGaattaatttttagtatacttaatatttattatttacttattaatttatttaGTATGGCCTTTATTTCAATTGAAGAGGAAAATTTTATGTTCGTGAAATTACCAAATGTTT-CTGCAAAAAAATAGAAAG--ATAAATGAAAAGGTGAACATAAAATTAAAAACTAATTTTCAGTTTTGAAAAATACCTACTGT i mm10.chr8 C 0 I 8230 s canFam3.chr16 15778825 543 - 59632846 TAAACGATATTTTCCCCATGAGTCAAA-TCTGATGATGGAGATCCACTAGAGTGATTGTATTGACATAGTTTATAGAAGGGTCATCAAA----GTACCATTGACTGGAAGCAAATTGGTTATAA-TTCACCTGAGAATGTTGTGGTGCCTGCCTCCATTGTCTTCTGAAGTCGACTTATAAAATCAG--ACCAGCATCCTCATGGACGTATTTAATAATGCATTCGAGCAGGCATTTTGCCAAATCCCTTTGAGATAGTATTAAATAGAAAGGTGTTTTAAACATTCATTTTGATGAATGGCACGTAGGTAATGACCTTGTTCGGTCCACAAAG-CTGATACACAATAAAGGCATTGACTAACAGAGAATTTATTGTAGTAAGGTGGAATTCATTTTTGGTACATTGGATATCTAT----------CTATCT------GTGTGTTCTTTATTTCAATTTTAGAAGAtttttttctaattaagaaattaatacatattcattgtagaaaattaggaaaatacagagaaa-----agagaaagaataaaaaaatta--tcc----ctgaaaaataactact-- i canFam3.chr16 C 0 C 0 a score=130908.000000 s hg38.chr4_KI270785v1_alt 114781 40 + 119912 ttttattttggtataAAT------ATGCATACAATTAATATTTTAT s panTro4.chr4 190382550 40 + 193495092 ttttattttggtataAAT------ATGCATACAATTAATATTTTAT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195358172 39 + 198332218 tttta-tttggtataAAT------ATGCATACAATTAATATTTTAT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111319428 40 + 115148730 ttttattttggtataAAT------ATGCATACAATTAATATTTTAT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181120213 40 + 184069350 ttttattttagtataAAT------ATGCATACAATTGATATTTTAT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186458427 40 + 189454096 ttttattttagtataAAT------ATGCATACAATTGATATTTTAT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176073111 40 + 178775436 ttttattttagtataaat------atgcatacaattaatattttat i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132914911 40 + 135778131 ttttattttggtataAAT------ATGCATACAATTAATATTTTAT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188300371 40 - 190850796 ttatattttggtataAAT------ATACATATAATTAATATTTTAT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15779368 45 - 59632846 ccttatttttgtataaatcctttaagatatacaaat-atatattat i canFam3.chr16 C 0 I 1557 e mm10.chr8 84778967 8230 - 129401213 I a score=857100.000000 s hg38.chr4_KI270785v1_alt 114821 270 + 119912 CACTCTTGTCAATCATTTCAAAGATG-TTATTCAAAGATATTTCTACAATGTTATTTGCAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGGCATGAAAAGAGGTTGACAAGAACCTGTCAAGGGAAAAAAGCAAGAACTAGAA-AACTTTTATAATAAAGCCTCATTTTTTTGTATC-AAAAATTTTAGAAGTCATGT-AGAAAAGTGTTTCTATATTAACAGTGTTTACCTCTGAGGAAGCTGATAAACAGAGCAGGTT-T- s panTro4.chr4 190382590 271 + 193495092 CACTCTTGTCAATCATTTCAAAGATG-TTATTCAAAGATATTTCTACAATGTTATCTGCAATTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGGCATGAAAAGAGGTTGACAAGAACCTGTCAAGGGAAAAAAGCAAGGACTAGAA-AACTTTTATAATAAAGCCTCATTTTTTTGTATC-AAAAATTTTAGAAGTCATGT-AGAAAAGTGTTCCTATATTAACAGTGTTTACCTCTGAGGAAGCTGATAAACAGAGCAGGTTAT- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195358211 271 + 198332218 CACTCTTGTCAATCATTTCAAAGATG-TTATTCAAAGATATTTCTACAATGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCGTGAAAAGAGGTTGACAAGAACCTGTCAAGGGAAAAAAGCAAGAACTAGAA-AACTTTTATAATAAAGCCTCATTTTTTTGTATC-AAAAATTTTAGAAGTCATGT-AGAAAAGTGTTTATATATTAACAGTGTTTACCTCTGAGAAAGCTAATAAACAGAGCAGATTAT- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111319468 270 + 115148730 CACTCTTGTCAATCATTTCAAAGATG-TTATTGAAAGATATTTCTACAATGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATGAAAAGAGGTTGACAAGAATCTGTCAACGGAAAAAGGCAAGAACTAGAA-AACTGTTATAATAAAGCCTCATTTTTTTGTATC-AAAAATTTTAGAAGTCATAT-AGAAAAGTGTTTATGTATTAACAGTGTTTACCTCTGAAGAAGCTGATAAACAGAGCAGGTT-T- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181120253 264 + 184069350 CACGCTTGTCAATCATTCCAAAGATG-TTATTCAAAGATATTTCTACAGTGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATGAAAAGAGGTTGACAAGAACCTGTCAAGGGAAAAAAGCAAGACATAGAA-AACATTTATAATAAAGCCTCATTTTTTTGTATCAAAAAATTTTAGAAGGCATAT-AGAAAAG--------TATTAACAGTGTTTACCTCTAAGGAAGTTGACAAACAGAGCAGGTTAA- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186458467 264 + 189454096 CACGCTTGTCAATCATTCCAAAGATG-TTATTCAAAGATATTTCTACAATGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATGAAAAGAGGTTGACAAGAACCTGTCAAGGGAAAAAAGCAAGACATAGAA-AACATTTATAATAAAGCCTCATTTTTTTGTATCAAAAAATTTTAGAAGGCATAT-AGAAAAG--------TATTAACAGTGTTTACCTCTAAGGAAGTTGACAAACAGAGCAGGTTAA- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176073151 264 + 178775436 cacTCTTGTCAATCATTCCAAAGATG-TTATTCAAAGATATTTCTACAATGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATGAAAAGAGGCTGACAAGAACCTGTCAAGGGAAAAAAGCAAGacatagaa-aacatttataataaagCCTCAtttttttGTATCAAAAAATTTTAGAAGGCATAT-AGAAAAG--------TATTAACAGTGTTTACCTCTAAGGAAGTTGACAAACAGAGCAGGTTAA- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132914951 264 + 135778131 CACTCTTGTCAATCATTCCAGAGATG-TTATTCAAAGATATTTCTACAATGTTATTTGTAGTTGAATAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATGAAAAGGGGTTGACATGAACCTGTCAAGGGAAAAAAGCAAGACATAGAA-AACATTTATAATAAAGCCTCATTTTTTTGTATCAAAAAATTTTAGAAGGCATAT-AGAAAAG--------TATTAACAGTGTTTACCTCTAAGGAAGTTGACAAACAGAGCAGGTTAA- i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188300411 261 - 190850796 CACTCTTGTTGAGCATTCCAAAGATG-TTATTCAAAGATATTTCTGCAGCGTTATTTGTAATTGAGTAATCTAAATGACCATCAACAGGACTTT-GATGTACTGCCATG--AAGAGGCTCACAAGTACCTGACAAGGGAAAAAGGCAAGATGTAAAA-ATCTTTCTTAATAATGCCTCA-TCTTTTGTATCAAGAAATTATAGAAGGCACAC-AGAAAAG--------TATTAACAGTGTTAACCTCTGAGGAAGTTGATAAACAGAGCAGGTTAA- i calJac3.chr3 C 0 I 7230 s canFam3.chr16 15780970 265 - 59632846 caccccTTTCAATCACTCTAAAGATGACTATTGAAGGATATTTAAAAAACGTT-TTTGTAATCGGATTATCTAAATGACTGTCAGTAGGActttagttgtactgatgtgaaaagaggttcacaaaaagttgtc-agggaaaaatgcaagatgtagaacaacatatataataAGTTTTGA--TTTTTATGTTGAAAATTGTTAGAAAGCATATGATAAAAG--------TATTAATAGTGTTTACCTCTGAGGAGATTAATAAATGGAGCATGTGCAT i canFam3.chr16 I 1557 C 0 e mm10.chr8 84778967 8230 - 129401213 I a score=2437228.000000 s hg38.chr4_KI270785v1_alt 115091 759 + 119912 TTTTTTATAACCAGTATTCATTTTGTAATAAATAAATAAACAACTCTAGCTTATGCTTGCTTTGTTAGAACACAGCAATCCATGGCATATGCAGATTGGGTCCT-GGTCCTGTGACTATTAAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCAAGAG-------AAAAAAAGGTGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAAAGGTAAAGGAGTGTAGATTACTTG-TTGAAAGTAGGATATTTGGGAACAATCTAACAACAAATATGTATTGACTGGCTACTCTGTATAATGCCCC-ACTTGGATGGTACTGAACAGAAATCCTAGATCCACAGAAAATTGTAAAAGGTGCCTATAATTAGGTGTCAGGATTTGCCGCTGATCTGGAAGGCCGACCTCTGAATACATACAGAGAAGAGTAACTGGTCTATATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaggtgtggaccaatcagaagggatactggctgtggtcctggggtagagtcctggagggtctattcataccaggcttaaattaacttttcggttgctacacaggggtgagc-agggggtcacagggcaaaggcctgggttgggggcagctcagtgagctAT-ACTCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGATGAGTGTTTGTAGTACTTGTTGCTACTATTATTTGCC s panTro4.chr4 190382861 755 + 193495092 TTTTTTATAACCAGTATTCATTTTGT----AATAAATAAACAACTCTAGCTTATGCTTGCTTTGTTAGAACACAGCAATCCATGGCATATGCAGATTGGGCCCT-GGTCCTGTGACTATTGAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCAAGAG-------AAAAAAAGGTGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAAAGGTAAAGGAGTGCAGATTACTTG-TTGAAAGTAGGATATCTGGGAACAATCTAACAACAAATATGTATTGACTGGCTACTCTGTATAATGCCCC-ACTTGGATGGTACTGAACAGAAATCCTAGATCCACAGAAAATTGTAAAAGGTGCCTATAATTAGGTGTCAGGATTTGCCGCTGATCTGGAAGGCTGACCTCTGAATATATACAGAGAAGAGTAACTGGTCTATATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaggtgtggaccaatcagaagggatactggctgtggtcctggggtagagtcctggagggtctattcgtaccaggcttaaattaacttcttggttgctacacaggggtgagc-agggggtcacagggcaaaggcctggattgggggcagctcagtgagctAT-ACTCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGATGAGTGTTTGTAGTACTTGTTGCTACTATTATTTTCA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195358482 750 + 198332218 TTTTTAATAACCAGTATTCATTTTGTAATAAATAAGTAAACAACTCTAGCTTATGCTTGCTTTGTTAGAACACAGCAATCCATGGCATATGCAGATGGGGTCCT-GGTCCTGTGACTATTAAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCAAGAG-------AAAA----GTGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAAAGGTAAAGGAGTGTAGATTATTTG-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGTATTGACTGGCTACTCTGTATAATGCCCC-ACTTGGATGGTACTGAACAAAAATCCTAGATCCACAGAAAATTGGAAAAGGTGCCTATAATTAGGTGTCAGGATTTGCCGCTGATCTGGAAGGCCGACCTCTGAATATATACAGAGAAGAGTAACTGGTCTGTATGTGAGCTgaggtgatatttaaaacatggaatgccctggacagcacagatgtggacgaatcagaagggatactggctgtggtcctggggtagagtcctggagggtctattcgtaccaggc-----ttaactttttggttgctacacaggggtgagc-agggggtcacagggcaaaggcctgggttgagggcagctcagtgagctAT-ACTCTAAATCCTGATAAGAATTCTACAAGGTAGGTGCAACTCTTCAGGATGAGTGTTTGTAGTACTTGTTGCTACTGTTATTTTCA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111319738 754 + 115148730 TTTTTTATAACCAGTATTCATTTTGTAATAAATAAGTAAACAACTCTAGCTTATGCTTGCTTTGTTAGAACACAGCAATCCATGGCATATGCAGATTGGGTCCT-GGTCCTGTGACTATTAAGAATTATTTACAGATTTAATTTTCCCATTTAAAGATAATTGTGAATCAATGCAAAGATTCCAAGAG-------AAAAAAAGATGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAAAGGTAAAGGAGTGTAGATTATTTG-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGTATTGATTGGCTACTCTGTATAATGCCCC-ACTTGGATGGTACTGAACAGAAATCCTAGATCCACAGAAAATTGGAAAAGGTGCCTATAATTAGGTGTCAGGATTTGCCGCTGATCTGGAAGGCCGACCTCTGAATATATACAGAGAAGAGTAACTGGTCTATATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaggtgtggaccaatcagaagggatactggctgtggtcctggggtagaatcctggagggtctatttataccaggc-----ttaactttttggttgctacacaggggtgagc-agggggtcacagggcaaaggcctgggttgggggCAGCTCAGTGCGCTAT-ACTCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGATGAGTGTTTGTAGTACTTGTTGCTACTATTATTTACA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181120517 744 + 184069350 TTTTTTATAACCAGTATTCATTTTGTAACAAATAAGTAAACAACTCTAGCTTATG-----------------CAGCAATCCGTGGCATATTCAGATTGTGTCCT-GGTCCTGCGACTATGAAGAATTATTTACAGATTCAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCAAAAGAAAAAAAAAAAAAAGATGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAGAGGTAAAGGAGTGTAGATTATTTA-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGCATTGACTGGCTCCTCTGTATAATGCCCC-GCTGGGATGGTACTGAACGGAAATCCTACATCCACAGAACGTTGGAAAAGGTGCCTATAATTGGGTGTCAGGATTTGCCGCTGATCTAGAAGGTCGACGTCTGGATATATACAGGGAAGAGTAGCTGGTCTACATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaagtgtgaaccagtcagaagggatactggctgtggtcctgcggtagagtcctggagggtccattcgtaccaggc-----ttaactttttggttgctacataggggtgagc-agggggtcacagggcaaaggcctgggttgggggcagctcagtgagctAT-ACGCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGGTAAGTGTTTGTAGTACCTGTCGCTACTACTATTTTCA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186458731 744 + 189454096 TTTTTTATAACCAGTATTCATTTTGTAACAAATAAGTAAACAACTCTAGCTTATG-----------------CAGCAATCCGTGGCATATTCAGATTGTGTCCT-GGTCCTGCGACTATGAAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCaaaagaaaaaaaaaaaaaaGATGCAGCTAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAGAGGTAAAGGAGTGTAGATTATTTA-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGCATTGACTGGCTCCTCTGTATAATGCCCC-GCTGGGATGGTACTGAACGGAAATCCTACATCCACAGAACGTTGGAAAAGGTGCCTATAATTGGGTGTCAGGATTTGCCGCTGATCTAGAAGGTCGACGTCTGGATATATACAGGGAAGAGTAGCTGGTCTACATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaagtgtgaaccagtcagaagggatactggctgtggtcctgcggtagagtcctggagggtccattcgtaccaggc-----gtaactttttggttgctacataggggtgagc-agggggtcacagggcaaaggcctgggttgggggcagctcagtgagctAT-ACGCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGGTGAGTGTTTGTAGTACCTGTCGCTACTACTATTTTCA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176073415 742 + 178775436 TTTTTTATAACCAGTATTCATTTTGTAACAAATAAGTAAACAACTCTAGCTTATG-----------------CAGCAATCCATGGCATATTCAGATTGTGTCCT-GGTCCTGCGACTATAAAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAaagattccaaaag--aaaaaaaaaaaagatgcagctAAATTATTAACAG---GTAAAACACTGTATCTGAGTGGAGAGGTAAAGGAGTGTAGATTATTTA-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGCGTTGACTGGCTCCTCTGTATGATGCCCC-ACTGGGATGGTACTGAACGGAAATCCTACATCCACAGAACGTTGGAAAAGGTGCCTATAATTGGGTGTCAGGATTTGCCGCTGATCTAGAAGGTCGACGTCTGGATATATACAGGGAAGAGTAGCTGGTCTACATGTGAGCTGAGGTGATATTTAAAACATGGAACGCCCTGGACAGCACAAGTGTGAACCAGTCAGAAGGGATACTGGCTGTGGTCCTGCGGTAGAGTCCTGGAGGGTCCATTCGTACCAGGC-----TTAACTTTTTGGTTGCTACATAGGGGTGAGC-AGGGGGTCACAGGGCAAAGGCCTGGGTTGGGGGCAGCTCAGTGAGCTAT-ACGCTAAATCCTGATAAGAATTCTAGGAGGTAGGTGCAACTCTTCAGGGTGAGTGAGTGTAGTACCTGTCGCTACTACTATTTTCA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132915215 739 + 135778131 TTTTTTATAACCAGTATTCATTTTGTAACAAATAAGTAAACAACTCTAGCTTATG-----------------CAGCAATTCATGGCATATTCCGATTGTGTCCT-GGTCCTGCGACTATGAAGAATTATTTACAGATTTAATTTTCCCATTTGAAGATAATTGTGAATCAATGCAAAGATTCCAAAAG-----AAAAAAAAAGATGCAGCTAAATTATTAACAG---GTAAGGCACTGTATCTGAGTGGAGAGGTAAAGGAGTGTAGATTATTTA-TTGAAAGTAGGACATTTGGGAACAATCTAACAACAAATATGCATTGACTGGCTCCTCTGTATGATGGCCC-ACTGGGATGGTATTGAACGGAAATCCTGCATCCACAGAACGTTGGAAAAGGTGCCTATAATTGGGCGTCAGGATTTGCCGCTGATCTAGAAGGTCGACGTCTGGATATATACAGGGAAGAGTAGCTGGTCTACATGTGAGCTgaggtgatatttaaaacatggaacgccctggacagcacaagtgtgaaccagtcagaagggatactggctgtggtcctgcggtagagtcctggagggtccattcgtaccaggc-----ttaactttttggttgctacataggggtgagc-agggggtcacagggcaaaggccggggttgggggcagctcagtgagctAT-ACGCTAAATCCTGATAACAATTCTAGGAGGTAGGTGCAACTCTTCAGGGTGAGTGTTTGTAGTACCTGTCGCTACTACTATTTTCA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188307902 741 - 190850796 TTTTTTATAACCAGTATTCTTTCTGTCATAAATAAGTAAACAACTCT-TCTTATACTTGCTTTATGAGAACACAACAATCCATGGCGTATTCAGATTGGGTCCTGGGTCTTGTGACTATAAGGAATTATTTACAGATTTAATTTTCCCTTTTAAAGATTATCATGAATCAATGCAGAGATTCCAGGAG-------AAAAAAAGGTACCACTAAATTATTAACAA---GTAAAACACTGAGTCTGAGTGGAAAGGTGCAGGAATGTACATTACTCA-TTGGAAGTAGGATATTTGGGAGCAATCTAACAATAAATATGTATTGCCTGGCTTCTCTGTATAATGCCCC-ACTGGGAGGGAACTGAA-----------GACCCACAGAAAATTGGAAAAGGCACCTATAATTAGGTGTCAGGATCTGTCACTGATCTGGAAGGCCAGCCTCTGAATATATGCAGGGGGGA-TAGTTGGTCTATGTGTGAGCTgaggtgacatttaaagcatggaatgccctggacagcacaggtgtggaccagtcagaagagatactggctgtggtactggggtagagtcctggagggtccattcatagcaggc-----tgaaccctttggttactgtatcagggtgggc-agggggtcacagggcaaagacctaggtTGGAGCAAGCTCATTGAGCTAT-ATGCTAAGTCCTGGTAAGCATTCTAGGAGGTCGGTGCAGCTCTTCCGGGCAAATGTTT-TAGTACTTGTTGCTCCTATTATTTTTG i calJac3.chr3 I 7230 C 0 s canFam3.chr16 15781235 713 - 59632846 TTTTTTATAACTAATATTAGCTTTGTTATGAATAAGTAAGCGATTCTAGGTTATACTTTCTTTGTTAGAACACAGCAATCTACAGTATATTCAGATTG-------GGGTTTGTGACTAGGAAAAATTATTTATGAATTTAATTTGCTCATCTGAAAAGAAT-GTAAATAAATATAAAGATTCTAGGGG------TAGGAAACACTACAGATAAGTTATTACCAATGTGTAAAACATAGTATCTGAGTGTAAAAGCAAAGGAGCTAAGACTATTTATTTAAAAGTAGGACATATGGAAATGATTTCACAATAAATATTTAGTGACTGGCTGCTATGCATAATGCCCCTAATGGGATGGTAATGAACAGAAATCACAGATTCATGGAAAATTGGAAAAGGTGTATGCAGTTAGGTATCTGGATCTGTCCATGGTCTGGAAGGCAGACCTCTGGACACAGCCCAGGGACAGTAGTTGGTCTACATGTGAGC-----Agatattttgaacatggaacacctggggcagcacaggcacgggccaatcagaaggtacacaggctctggcactggggtagaggcctgga-agcccatctgtagcagca-----ataaccttttggctcctggatAAAGGTAAGCTAAGGCAGCACAGGTCACAGGT---------------CTCAGGGAGCCATGGGGCTAAATCCAAGTAACAATC--------------TAATTTTTCAGG------GTTTATAATGCTTACTGTTATTATT-TTTTCA i canFam3.chr16 C 0 C 0 e mm10.chr8 84778967 8230 - 129401213 I a score=996810.000000 s hg38.chr4_KI270785v1_alt 115850 348 + 119912 TCTTCTAGAACACGGGTCCGCAACCCccaggccatgaaccagtgtgggaaccaggcagcatgcaggaagtgattggcagatgagcaagcaaagcttcatctgtataacagctgctcccca----tccttcgcactgcgcctgggctctgcctctggtcagagcagaagcagcatcagattctcagaggagcacaaaacctattgtgaactgcagatgtgagggatctaagttgcatgctccttatgagaatctaatgcctgatgatctgtcactgtctccccacaacacccgtccatggaaacattgtcttccatg--aaactgattcctggtgccaaaaaggttgtggattgc s panTro4.chr4 190383616 348 + 193495092 TCTTCTAGAAcacgggtccccaacccccgggccatgaaccagtgtgggaaccaggcagcacccaggaagtgattggcagacaagcaagcaaagcttcatctgtgtaacagctgctcccca----tccttcgcattgcgcctgggctctgcctctggtcagagcagaagcagcatcagattctcagaggagcacaaaacctattgtgaactgcagatgtgagggatctaagttgcatgctccttatgagaatctaatgcctgatgatctgtcactgtctccccgcaacacccgtccatggaaacattgtcttccatg--aaactgattcctggtgccaaaaaggttgcggattgc i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195359232 354 + 198332218 TCTTCTAGAAcacgggtccccaacccctgggccatgaaccagtgtaggaaccaggcagcacgcaggcagtgattggcagacgagcaagcaaagcttcatctgtataacagccgctccccatccttccttcgcattgcgcctgggctctgcctctggtcagagcagcagcagcatcagattctcagaagagcacaaaacctattgtgaactgcagatgtgagggatctaagttgtatgctccttatgagaatctaatgcctgatgatctgtcactgtctccctgcaacagctgtccgtggaaacattgtcttccatgaaaaactgattcctggtgccaaaaaggttgtggattgc i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111320492 348 + 115148730 TCTTCTAGAACACAggtccccaacccccgggccatgaaccagtgtaggaaccaggcagcacgcaggaagtgattggcagacgagcaagcaaagcttcatctgtataacagccgctcccca----tccttcgcattgtgcctgggctctgcctctcatcagagcagcagcagcatcagattctcagaggagcacaaaacctattgtgaactgcgtatgtgagggatctaagttgcatgctccttatgagaatctaatgcctgatgatctgtcactgtctccccgcaacacccgtccatggaaacattgtgttccatg--aaactgattcctggtgccaaaaaggttgtggattgc i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181121261 346 + 184069350 TCTTCTAGAAcacgagtccccaactcccgggccatgaaccagtataggaaccaggtagcatgcaggaggtgactggcagatgagcaagcaaagcttcatctgtgtaacagctgctccccg----tcccttgcattgcgcctggcctctgcctctcatcagatcagcagcagcagcagattctcag--gagcacggaacctattgtgaactgcatatgtgagggatctaagctgagtgttccttatgagaatctaatgcctgatgatctgtcactgtctccccacaacacccgtccatggaaacattgtcttccatg--aaactggttcctggtggcaaaaaggttgtggattgc i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186459475 346 + 189454096 TCTTCTAGAAcacgagtccccaactcccgggccatgaaccagtataggaaccaggtagcatgcaggaggtgactggcagatgagcaagcaaagcttcatctgtgtaacagctgctccccg----tcccttgcattgcgcctggcctctgcctctcgtcagatcagcagcagcagcagattctcag--gagcacggaacctattgtgaactgcatatgtgagggatctaagctgagtgttccttatgagaatctaatgcctgatgatctgtcactgtctccccacaacacccgtccatggaaacattgtcttccatg--aaactggttcctggtggcaaaaaggttgtggattgc i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176074157 346 + 178775436 TCTTCTAGAACACGAGTCCCCAACTCCCGGGCCATGAACCAGTATAGGAACCAGGTAGCACGCAGGAGGTGACTGGCAGACgagcaagcaaagcttcatctgtgtaACAGCTGCTCCCCA----TCCCTCGCATTGCGCCTGACCTCTGCCTCtcgtcagatcagcagcagcagcagattcTCAG--GAGCACGgaacctattgtgaactgcatacGTGAGGGATCTAAGCTGagtgttccttatgagaatctaatgcctgatgatctgtcactgtctccccaCAACACCCGTCCATGGAaacattgtcttccatg--aaactggttccTGGTGGCAAAAAGGTTGTGGATTGC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132915954 346 + 135778131 TCTTCTAGAAcacgagtccccaactcccgggccatgaaccagtataggaaccaggtagcatgcaggaggtgactggcagacaagcaagcaaagcttcatctgtgtaacagctgctcccca----tccctcgcattgcgcctggcctctgcctctcgtcagatcagcagcagcagcagattctcag--gagcacggaacctattgtgaactgcacatgtgagggatctaagctgtgtgttccttatgagaatctaatgcctgatgatctgtcactgtctccccacaacacccgtccatggaaacattgtcttccatg--aaactggttcctggtggcaaaaaggttgtggattgc i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188308643 337 - 190850796 TCTTCTAGAAAaggggtcaccagcccccaggccatgaagcagtataggaatcaggcagcatgcaggaggtggttggcaga-gagcaagcaaagcttcagctgtgtgacagcccctcccca----tcaatcacatcacgcctgagctctgcctcctgtcacatcagaggcagcattagattctcagaggagccccaaaccttttgtgaa-tgtgtaggtgagggatctaggctgcatgctccttatgagaatctaatccccgatgatctgtcaccatctcc---------ctgtctgtggaaatattgtcttttatg--aaactggtccctggtgccaaaaaggttggggactgc i calJac3.chr3 C 0 C 0 e canFam3.chr16 15781948 0 - 59632846 C e mm10.chr8 84778967 8230 - 129401213 I a score=697091.000000 s hg38.chr4_KI270785v1_alt 116198 227 + 119912 tgTTCTAGAAAATATCATGAGA--GTTTACTTACGAAAC--GTGTTAAATTAAAAGACTA----TATATTAAATGAAAACATTTGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTGTTTGCCCCTCTCTATCTCCCG---GTCATGTCAGTACCTTTGTACCTGTT----------CTTTCACATCAAATGGAATGGCTGAGTTAGATGTCTTTCATTTCAGCCCTCTTGA----CACCATA s panTro4.chr4 190383964 227 + 193495092 tgTTCTAGAAAATATCATGAGA--GTTTACTTACGAATC--GTGTTAAATTAAAAGACTA----TATATTAAATGAAAACATTTGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTGTTTGCCCCTCTCTATCTCCCG---GTCATGTCAGTACCTTTGTACCTGTT----------CTTTCACATCAAATGGAATGGCTGAGTTAGATGTCTTTCATTTCAGCCCTCTTGA----CACCATA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195359586 227 + 198332218 tgTTCTAGAAAATATCATGAGA--GTTTACTTACGAAAC--GTGTTAAATTAAAAGACTA----TATATTAAATGAAAACATTTGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGCCCCTCTCTATCTCCCA---GTCATGTCAGTACCTTTGTACCTGTT----------ATTTCGCATCAAATGGAATGGCTGAGTTAGATATCTTTCATTTCAGCCCTCTTGA----CACCATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111320840 231 + 115148730 tgTTCTAGAAAATATCATGAGA--GTTTACTTACGAAAC--GTGTTAAATTAAAAGACTA----TATATTAAATGAAAACATTTGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGCCCCTCTCTATCTCCCG---GTCATGTCAGTACCTTTGTACCTGTT----------CTTTCACATCAAATGGAATGGCTGAGTTAGATATCTTTCATTTCAGCCCTCTTGAATTCCACCACA i nomLeu3.chr7b C 0 I 112 s rheMac3.chr5 181121607 223 + 184069350 tgTTCTAGAAAATATCATGGGA--GTTGACTTAAGAAACATGTGTTAAATTAAAAGACTA----TGTATTAAATGAAAACG--TGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGC----CTCTATCTCCTG---GTCACGTCAGTACCTTTGTAACTGTT----------CTTTCACATCACATGGAATGGCTGAGTTAGATATCTTTCATCTCAGCCCTCTTGA----CACAGGA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186459821 223 + 189454096 tgTTCTAGAAAATATCATGGGA--GTTGACTTAAGAAACATGTGTTAAATTAAAAGACTA----TGTATTAAATGAAAACG--TGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGC----CTCTATCTCCTG---GTCACGTCAGTACCTTTGTAACTGTT----------CTTTCACATCACATGGAATGGCTGAGTTAGATATCTTTCATCTCAGCCCTCTTGA----CACAGGA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176074503 223 + 178775436 TGTTCTAGAAAATATCATGAGA--GTTGACTTAAGAAACATGTGTTAAATTAAAAGACTA----TGTATTAAATGAAAACG--TGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGC----CTCTATCTCCTG---GTCACGTCAGTACCTTTGTAACTGTT----------CTTTCACATCACATGGAATGGCTGAGTTAGATATCTTTCATCTCAGCCCTCTTGA----CACAGGA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132916300 223 + 135778131 tgTTCTAGAAAATATCATGAGA--GTTGACTTAAGAAACATGTGTTAAATTAAAAGACTA----TGTATTAAATGAAAACG--TGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGGCTTTTTGC----CTCTATCTCCTG---GTCACGTCAGTACCTTTGTAACTGTT----------CTTTCACATCACATGGAATGGCTGAGTTAGATATCTTTCATCTCAGCCCTCTTGA----CACAGGA i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188308980 232 - 190850796 tgTTCTAGAAAATATCATGAGATGGTTTGCTTATGAAAC--ATGTTAAATTGAAAGTCTA----TAGATTAAATAAAAACATTTGTAGATTTCAGTCATTTAAATTGCTGTTTTCTCCTTAGCCTTTTTGCTCCTCTCTATCTCCCAGTCGTCATATCAGTACCTTTGTAACTGTT----------CTTTCCTGTCAAAGGGAATGGCTGAGTCGGATGCCTTTCTTCTCCACCCCCTTGA----CATCTTA i calJac3.chr3 C 0 C 0 s canFam3.chr16 15781948 237 - 59632846 TATTTTAGAAATTGGCATTGGATAGTCTGCTCATGAAATACATGTTAAATGAAGACATTACATTTGTAATAAATAAAAA----TGTAGATTTCAATGGCTTAAACTGTGGTTTTTTTCCTTAGGTTTTTCCACTATTCTAACTTTTA---GTCACATAAATATCTTTGTAACTACTCTTCAGACCACTTTTACCCCAAATAAAATGGCCAAGTTAAATGTCATTCACCTTAGCTACTTTGG----CAC---- i canFam3.chr16 C 0 C 0 e mm10.chr8 84778967 8230 - 129401213 I a score=640224.000000 s hg38.chr4_KI270785v1_alt 116425 265 + 119912 ACCATGTCCTTTT-TTCTGAAGCTACTATTATTTCCAGAAGTTAGTATTTCCTTAGATGATAAAATAGCAATAGTAACTTCAACAATATGGTAAATTTAGAGTTGTCCTCTGGGGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAATACCTGAACATTTTTAGTTAATTTAAACCACCAAAAATTCA--------------ATTAACAATGGATATGTTTATAAGTAAGCTATAGACCATGGTGGGCCCTTCCTAGTAACATCTTACTTT s panTro4.chr4 190384191 265 + 193495092 ACCATGTCCTTTT-TTCTGAAGCTACTATTATTTCCAGAAGTTAGTATTTCCTTAGATGATAAAATAGCAATAGTAACTTCAACAATATGGTAAATTTAGAGTTGTCCTCTGGGGCTAGAGATGAATTTTGTTATTGTAACTTTCAACTTTAAGAATACCTGAACATTTTTAGTTAATTTAAACCACCAAAAATTCA--------------ATTAACAATGGATATGTTTATAAGTAAGCTATAGACCACGGTGGGCCCTTCCtagtaacatcttacttt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195359813 265 + 198332218 ACCATGTCCTTTT-TTCTGAAGCTACTATTATTTCCAGAAGTTGGTATTTCCTTAGATGATAAAATAGCAATAATAACTTCAACAATATGGTAAATTTAGAGTTGTCCTCTGGGGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAATACCTGAACATTTTTAGTTAATTTAAACCACCAAAAATTCA--------------ATTAACAATGGATATGTTTATAAGTAAGCTATAGACCATGGTGGGCCCTTCCtagtaacatcttacttt i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181121830 265 + 184069350 ATCATGTCCTTTTCTTCTGAAGCTACTATTATTTCCAGAGGTTGGTATTTCCTTAGATGATAAAATAGCAAAGGTAACTTCAACAACATGGTAAATTCAGAGTCCTCCTCTGGGGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAACACCTGAACATTTTTAGTTAATTTAAA-CACCAAAAATTCA--------------GTTAACAATGGATATGTTTATAAGTAAGCCATAGACCATGGTGGGTCCTTCCTAGTAACATCTTacttt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186460044 265 + 189454096 ATCATGTCCTTTTCTTCTGAAGCTACTATTATTTCCAGAGGTTGGTATTTCCTTAGATGATAAAATAGCAAAGGTAACTTCAACAACATGGTAAATTCAGAGTCCTCCTCTGGGGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAACACCTGAACATTTTTAGTTAATTTAAA-CACCAAAAATTCA--------------GTTAACAATGGATATGTTTATAAGTAAGCCATAGACCATGGTGGGTCCTTCCTAGTAACATCTTacttt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176074726 266 + 178775436 ATCATGTCCTTTTCTTCTGAAGCTACTATTATTTCCAGAGGTTGGTATTTCCTTAGATGATAAAATAGCAAAGGTAACTTCAACAACATAGTAAATTCAGAGTCCTCCTCTGGAGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAACACCTgaacatttttagttaatttaaacCACCAAAAATTCA--------------GTTAACAATGGATATGTTTATAAGTAAGCCATAGAACATGGTGGGTCCTTCCTAGTAACATCTTACTTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132916523 266 + 135778131 ATCATGTCCTTTTCTTCTGAAGCTACTATTATTTCCAGAGGTTGGTATTTCCTTAGATGATAAAATAGCAAAGGTAACTTCAACAACATGGTAAATTCAGAGTCCTCCTCTGGAGCTAGAGATGAATTTTGTTATTGTAACTTTTAACTTTAAGAACACCTGAACATTTTTAGTTAATTTAAACCACCAAAAATTCA--------------ATTAACAATGGATATGTTTATAAGTAAGCCATAGACCATGGTGGGTCCTTCCTAGTAACATCTTACTTT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188309212 260 - 190850796 ATCATGTCCTTTT-TTCTGAAGCAACTATTTTTTCTAGAAGTTGACA-----TTAGATGATAAAATAGCAATAGTAACTCCAAAAACATGGCAAATTTAGAATCATCCTCTGGGGCTGCAGAAGAATTTTGTTATTGTAACTTTTAACTTTAAGAACACCTGAAATTTTTTAGTTACTCTAGACCACCAAAAATACA--------------ATGAACAATGCATACTTTTACAGGTAAGCTGTAGTCCATGCCGGGCCCTTCCTAGTAACATTTTACTTT i calJac3.chr3 C 0 I 767 s canFam3.chr16 15782185 193 - 59632846 ---------------------------AT--TTTCTAGAAGTTGGTATTTTTTTAGATGATAAAGTACTAATAATAACCCTACAAACATAGTGAGTTTAGAGATGTCCTC------------------------------------------AGGATACC------------AATGCTTTAAACTACCaaatatatatatatatacatattattaaca----acatatttatttttGAACCATAGTTCATGGTAGGCCCTTCacaataacgtcttagttt i canFam3.chr16 C 0 C 0 e mm10.chr8 84778967 8230 - 129401213 I e nomLeu3.chr7b 111321071 112 + 115148730 I a score=313487.000000 s hg38.chr4_KI270785v1_alt 116690 119 + 119912 ACATGTAACAATTCTcttgagatgcagta-------tttcatctacttattgtgacaatctttcaaagaaggcaatatcgttcaaattttgtaaacaaggaaacagagggttagagaaatcaaact s panTro4.chr4 190384456 119 + 193495092 atatgtaacaattcacttgagatgcagta-------tttcatctacttattgcgacaatcttttgaagaaggcaatatcattcaaattttgtaaacaaggaaacagagggttagagaaatcacact i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195360078 119 + 198332218 atatgtaacaattcacttgagatgcagta-------tttcatctacttattgtgacaatctttcgaagaaggcaatatcattcaaattttgtaaacaaggaaacagagggttagagaaatcaaact i ponAbe2.chr4 C 0 C 0 s rheMac3.chr5 181122095 119 + 184069350 atatgtaacaattcacttgtgatgcagca-------tttcatctacttattgcaacaatcttttgaagaaggcaatatcattcacattttataaacaaggaaacagagggttagataaatcaaact i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186460309 119 + 189454096 atatgtaacaattcacttgtgatgcagca-------tttcatctacttattgcaacaatcttttgaagaaggcaatatcattcacattttataaacaaggaaacagagggttagataaatcaaact i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176074992 119 + 178775436 ATATGTAACAATTCACTTGTGATGCAGCA-------TTTCGTCTACTTATTGCAACAATCTTTTGAAGAAGGCAATATCATTcacattttataaacaaggaaaCAGAGGGTTAGATAAATCAAACT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132916789 119 + 135778131 ATATGTAACAATTCAATTGTGatgcagca-------tttcatctacttattgcaacaatcttttgaagaaggcaatatcattcacattttataaacaaggaaacagagggttagataaatcaaact i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188310239 118 - 190850796 ATATGTAACAATGCACTTGAGGTGTAGC--------TTCcatctacttattgcaacaagcttctgaagaagggaatgtcattcaaattttataaacaagtaaactgagggttagagaaatcaaact i calJac3.chr3 I 767 C 0 s canFam3.chr16 15782378 122 - 59632846 ttctatagcatttcac----aagacagcatatgcggtttcatttactgattgcaataatcttttgagagagacaatataattcatattttataaatatggaaactgaggctcagagaaatcaaact i canFam3.chr16 C 0 C 0 e mm10.chr8 84778967 8230 - 129401213 I e nomLeu3.chr7b 111321071 112 + 115148730 I a score=506213.000000 s hg38.chr4_KI270785v1_alt 116809 169 + 119912 gcttgtcttaaagtacacagc-tataagcagcatcatcagagccaaaattctgtgatttttttttt-ttttggctataaatctaatg-ttttttctactactttcca----------------ctgcccTGTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTATAGCTAGTTTGGT s panTro4.chr4 190384575 166 + 193495092 gcttgtcttaaagtacacagc-tataagcagcatcatcagagccaaaattctgtga---ttttttt-ttttggctataaatctaatg-tttattctactactttcca----------------ctgccctgTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTATAGCTAGTTTGGT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195360197 164 + 198332218 gcttgtcttaaagtacacagc-tataagcagcatcatcagagccaaaattctgtga-----ttatt-ttttggctataaatctaatg-ttttttctactactttcca----------------ctgccctgTTTTCATTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTATAGCTAGTTTGGT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111321183 162 + 115148730 Gcttgtctt-aagtacacagc-tataagcagcatcatcagagccaaaattctgtga------tttt-ttttggccataaatctaatg-ttttttctgctactttcca----------------ttgccctgTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTGCAAATAACAGTTATAGCTAGTTTGGT i nomLeu3.chr7b I 112 C 0 s rheMac3.chr5 181122214 165 + 184069350 gcttgtcttaaagtacacagc-tataagtagcatcatcacagccaaaattctgtga-----ctatt-ttttgactataaatctaacatttttttctactattttcca----------------ctgccttgTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTAAAGCTAGTTTGGT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186460428 165 + 189454096 gcttgtcttaaagtacacagc-tataagtagcatcatcagagccaaaattctgtga-----ctatt-ttttgactataaatctaacatttttttctactattttcca----------------ctgccttgTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTATAGCTAGTTTGGT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176075111 166 + 178775436 GCTTGTCTTAAAGTACACAGC-TATAAGCAGCGTCATCAGAGCCAAAATTCTGTGA-----CTTTTCTTTTGACTATAaatctaacatttttttctactattttcca----------------ctgccttgtttttgttttcttatg--------------------------ttttagtGTTGACTACAAATAACAGTTATAGCTAGTTTGGT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132916908 166 + 135778131 gcttgtcttaaagtacacagc-tataagcagcgtcatcagagccaaaattctgtga-----ttttttttttggctataaatctaacatttttttctactattttcca----------------ctaccttgTTTTTGTTTTCTTATG--------------------------TTTTAGTGTTGACTACAAATAACAGTTATAGCTAGTTTGGT i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188310357 160 - 190850796 -gatgcctcaaagtacacggcttataagcagcagcatcagagccaaaatcctatgg--------tt-ttttggctataaatctaacg--tttttctagtactttcca----------------ctgccctgCTTTTGTTTTCTTATG--------------------------TTTTAATGTTGACTACAGATGATGGTTACAGCCAGTTTGGT i calJac3.chr3 C 0 C 0 s canFam3.chr16 15782500 204 - 59632846 atttacttcaatggacacaacttagaagtcacataattagagctaaaatactagga--------tg-tttttcccatacatctaaaa-ttctttgtaccacattccactatctGATGAGTTGGCTGCCttttttttttttttttttggcggcttttttttttttttAAAAGGTTTTTAGTATTGACTACAAATAACAGTTATGGTTAGTTTGGC i canFam3.chr16 C 0 C 0 e mm10.chr8 84778967 8230 - 129401213 I a score=1784177.000000 s hg38.chr4_KI270785v1_alt 116978 472 + 119912 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ATACTTTGTCTTTCAGAATGTAAT--AAAAAAC---TCCCAATTACATAAATGTTGATTCGCTAGGTTCTATAACATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCCATTTTACATCTCATTTTCATCGAGAAACTTGAAATGTGTAATGTGGTTCAAATTCCTTGATGCATTTAACAGCCCATTGGGTTTTGTG-----TGTCCAATAACTGCCACCACCCCTCAACCTACAGAAGCAGATACCTTGTGAATTATAAATTTGTGCATAATGGAAGCCAATTGCCACATGTTCATTTGGATTTTAATAATTCAGGGATAATCTGCTACAGGTAGAGTGGGACAGATCCCCCTTACGTGGCAAAATTGGAAAAAAGGTAGACAAAC--AATT---------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC s panTro4.chr4 190384741 472 + 193495092 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ATACTTTGTCTTTCAGAATGTAAT--AAAAAAC---TCCCAATTACATAAATGTTGATTAGCTAGGTTCTATAACATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCCATTTTACATCTCATTTTCATCGAGAAACTTGAAATGTGTAATGTGGTTCAAATTCCTTGATGCATTTAAGAGCCCATTGGGTTTTCTG-----TATCCAATAACTGCCACCACCCCTCAACCTACAGAAGCAGATACCTTATGAATTATAAATTTGTGCATAATGGAAGTCAATTGCCACATGTTCATTTGGATTTTAATAATTCCGGGATAATCTGCTACCGGTAGAGTGGGACAGATCCCCCTTACATGGCAAAATAGGAAAAAAGGTAGACAAAC--AATT---------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195360361 473 + 198332218 TTTAAGGGATACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ATACTTTGTCTTTCAGAATGTAAT--AAAAAAC---TCCCAATTACATAAATGTTGATTAGCTAGGTTCTATAACATTGAATCATAGTCTTGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCTATTTTACATCTCATTTTCATCAAGAAACTTGAAATGTGTAATGTGGTTCAAATTCA-TGATGCATTTAACGGCCCATTGGGTTTTGTG-----TATCCAATAACTGCCACCACCCCTCAACCTACAGAAGCAGATACCTTATGAATTATAAATTTGTGCATAATAGAAGTCAATTGCCACATGTTCATTTGGATTTTAATAATTCAGGGATAATCTGCTACAGGTAGAGTGGGACAGATCCCCCTTACATGGCAAAATAGGAGAAAAGGTAGACAAACAGAATT---------------AA----------------------TA--TTGAAGGGTTGAAATTAGCATCTAC i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111321345 473 + 115148730 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ATACTTTGTCTTTCAGAATGTAAT-AAAAAAAC---TCCCAATTACATAAATGTTGATTAGCTAGGTTCTAAAACATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCTATTTTACATCTCATTTTCATCAAGAAACTTGAAATGTGTGATGTGGTTCAAATTCCTTGATGCATTTAACAGCCCACTGGGTTTTGTG-----TATCCAGCAACTGCCACCA-CCCTCAACCTACAGAAGCAGATGCCTTATGAATTATAAATCTGTGCATAATGGAAGTCAATGGCCACATGTTCATTTGGATTTTGATAATTCAGGGCTAATCTGCTACAGGTAGAGTGGGATAGATCCCCCTTACATGGCAAAATAGGAAAAAAAGTAGACAAACAGAATT---------------AA----------------------TA--ATGAAGGGTTG-AATTAGCATCTAC i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181122379 468 + 184069350 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ACTCTTTGTCTTTCAGAATGTAAT---AAAAAC---TCCCAATTACATAAATGTTGATTAGTTAGGTTCCATAATATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCTATTTTACATCTCATTTTCATCAAGAAACCTGAAATGTGTGATGTGGTTCAAATTCCTTGATGCCTTTAACAACCCATTGGGTTTTGTG-----TATCCAATAACTGCCACCG-CCCTCAACCTACAGAAGCAGATGCCTTATGAATTATAAATTTGTGCATAATGGAAGTCAATGGCCACATGTTCATTTGGATTTTAATAATTCAGGACTAATCTGCTATAGGTAGAGTGGGACAGATCCCCCTTACATGACAAAATTGGAAAAGAGGTAGACAAAC--AG-----------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186460593 468 + 189454096 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ACTCTTTGTCTTTCAGAATGTAAT---AAAAAC---TCCCAATTACATAAATGTTGATTAGTTAGGTTCCATAATATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCTATTTTACATCTCATTTTCATCAAGAAACCTGAAATGTGTGATGTGGTTCAAATTCCTTGATGCCTTTAACAACCCATTGGGTTTTGTG-----TATCCAATAACTGCCACCG-CCCTCAACCTACAGAAGCAGATGCCTTATGAATTATAAATTTGTGCATAATGGAAGTCAATGGCCACATGTTCATTTGGATTTTAATAATTCAGGACTAATCTGCTATAGGTAGAGTGGGACAGATCCCCCTTACATGACAAAATCGGAAAAGAGGTAGACAAAC--AG-----------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176075277 468 + 178775436 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTA--------TAAA--------ACTCTTTGTCTTTCAGAATGTAAT---AAAAAC---TCCCAATTACATAAATGTTGATTAGTTAGGTTCCATAATATTGAATCATAGTCTCGAATGGcaaaaatgaattaacacagTTTAATTCCCCTATTTTACATCTTATTTTCATCAAGAAACCTGAAATGTGTGATGTGGTTCAAATTCCTTGATGCCTTTAACAACCCATTGGGTTTTGTG-----TATCCAATAACCGCCACCG-CCCTTAACCTACAGAAGCAGATGCCTTATGAATTATAAATTTGTGCATAATGGAAGTCAATGGCCACATGttcatttggattttaaaaattcaggactAATCTGCTATAGGTAGAGTGGGACAGATCCCCGTTACATGGCAAAATCGGAAAAAAGGTAGACAAAC--AG-----------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132917074 468 + 135778131 TTTAAGGGACACAATGTTTGAAAGGCCTTTATCAATTTT--------TAAA--------ACTCTTTGTCTTTCAGAATGTAAT---AAAAAC---TCCCAATTACATAAATGTTGATTAGTTAGGTTCCATAATATTGAATCATAGTCTCGAATGGCAAAAATGAATTAACACAGTTTAATTCCCCTATTTTACATCTCATTTTCATCAAGAAACCTGAAATGTGTGATGTGGTTCAAATTCCTTGATGCCTTTAACAACCCATTGGGTTTTGTG-----TATCCAATAACTGCCACCG-CCCTCAACCTACAGAAGCAGATGCCTTATGAATTATAAATTTGTGCATAATGGAAGTCAATGGCCACATGTTCATTTGGATTTTAATAATTCAGGACTAATCTGCTATAGGTAGAGTGGGACAGATGCCCCTTACATGGCAAAATTGGAAAAAAGGTAGACAAAC--AG-----------------AA----------------------TA--ATGAAGGGTTGAAATTAGCATCTAC i chlSab2.chr7 C 0 C 0 s calJac3.chr3 188310517 472 - 190850796 TTTATGGGATACAGTGTTTG-AAGGCCTTTATCGATTTT--------TAAA--------ATACTTTGTCTTTCAGAATGTAACAAAAAAAAC---TCCCAATTACATAAATGTTGATTAATTAGGTTCTATAATATTGAATCGCCATCTCAAATGACAAAAATGTATTAACACATTTTAATTCCCC---TTTACATCTTATTTTCATCAAGAAACCTGAACTGTGCAATGGGATTCAAATTCCTTGATGCATTTCACAGCCCGTTGGGTTCTGTG-----TATCCGATAACTGCCACCACCCCTCAACCTATGGAAGCAGATGCCTTATAAATTATACATTTCTGCGTAATGGAAGTCAAGGACCACAAATTCATTTGGATTTTAATAATTCAGGACTAATCTGTGATAGGTAGGGTGGGAGAGGTCCCCCTGACATGGCAAAATAGGAGAAAAGGTAGACAAGCAGAATT---------------AA----------------------TC--ATGAAGGGTTGAAATCAGCAGCTAC i calJac3.chr3 C 0 N 0 s mm10.chr8 84787197 491 - 129401213 TTTGTAAGGTATGGTATTTGTAAGTCCTTTATCAATTTT--------TAAAATACTACTATACTTTGATTTTTAGAATGCAAT---AAAAACACATCCCAATTATATAAATTATGATCAGGTAGGGTCTATGCTATTGAATTATAGTCTCCATTGATGAAAATGTGTTAACACC-CTTAGTTTTCATCTTTCTCCTCTAATTTTAATCAACAAACCTGACTTGGGAGGTGTGGTCCCCATCCCTGGTTGTGGTTAAGCGTCTATTGGGGTTTGTG-----TGTCTAATGATTGCAGTCA-CCTTC-CCCTACAGAAGCAGATGCCTTATGAATTATAGATTTTTGCATAACCCAAGTCAGTGGGCATGGGTTCATTTGGATTTTAATAATTCAGGACTAATCTGCTGTAGTTAGA---GGACAGATCTACCTTTCATGGCAAAACAGTAAAAAGTGGGGATATAG--AATTCATTGGTTACTCTACAA----------------------TACTTTAAAGGGTTAAAATTA-CAT-TAC i mm10.chr8 I 8230 I 1 s canFam3.chr16 15782704 486 - 59632846 TTTAAAGG--AAGATGCTTTAAAGGCCTTTATAAATTTTTCATAGACTAAA--------AGCTTTTGCCTTTCAGGATGTAAT---AAAAAT---TCTCAATTACATAAATGTTGATTAGTT-GGTTTTATAATATTGAATAATAGTCTCCATTGAGAAAAATGTATTAA----------TTCCCTTCCTTTACATCCCATTTTCATTAACAAACCTGAAATGTGTGATGTGCCACAAATTCCTCTATGTATTTGATAATCCTTTGGGGTTTGTGTTATATAGCCAACAACTGCCACCA----CCAACCTACAGAAGCAGATGCTTTATGAATTATAGATTTTTGCATAACAGAAGTCAATGGCCACAAGTCCATTTGGATTTTAATAATTCAGAACTAATTTAATACAATTAGAGTAGGACAGATCCTTGTTACATGACAAAATAAGA-AAAAGGTAGACAAAC--AATT---------------AATTTGGTTAACTCAGGAATATTTTA--AGTAAAGATTGAAATTAG--TCTAC i canFam3.chr16 C 0 C 0 a score=445801.000000 s hg38.chr4_KI270785v1_alt 117450 163 + 119912 CAATGTCATTAA--T--------GCTTTGTCATT----CTTACCTGGATTTCCTTT--AGGTAAAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACAGTAAGACATAGTCTCTTTTGCAGT-----------ATCTTGTATATCTAAAGAATCTAAAATGTCAGTTAGAACATAAAATGCTTTGGACTG s panTro4.chr4 190385213 163 + 193495092 CAATGTCATTAA--T--------GCTTTGTCATT----CTTACCTGGATTTCCTTT--AGGTAAAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACAGTAAGATATAGTCTCTTTTGCAGT-----------ATCATGTATATCTAAAGAATCTAAAATGTCGGTTAGAACATAAAATGCTTTGGACTG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195360834 163 + 198332218 CAATGTCATTAA--T--------GCTTTGTCATT----CTTACCTGGATTTCCTTT--AGGTAAAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACAGTAAGATATAGTCTCTTTTGCAGT-----------ATCATGTATATCTAAAGAATCTAAAATGTCGATTAGAACATAAAATGCTTTGGACTG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111321818 163 + 115148730 TAATGTCATTAA--T--------GCTTTGTCATT----CTTACCTGGATTTCCTTT--AGGTAAAGGCAAGGA--TTTATCCATTTTATTTCTACTAACAGTAAGATATAGTCTCTTTTGCAGT-----------ATCATGTGTATCTAAAGAATCTAAAATGTCGATTATAACATAAAATGTTTTGGACTG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181122847 160 + 184069350 CAATGTC---AA--T--------GCTTTGTCATT----CTTGCCCGGATTTCCTTT--AGGTAGAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACAGTAAGATATAGTCTCTTTTGCAGT-----------ATCATGTATATCTAAAGAATCTAAAAAGTGGATCAGAACAAAAAATGCTTTGGACTG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186461061 160 + 189454096 CAATGTC---AA--T--------GCTTTGTCATT----CTTGCCCGGATTTCCTTT--AGGTAGAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACAGTAAGATATAGTCTCTTTTGCAGT-----------ATCATGTATATCTAAAGAATCTAAAAAGTGGATCAGAACAAAAAATGCTTTGGACTG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176075745 163 + 178775436 CAATGTCATTAA--T--------GCTTTGTCATT----CTTGCCCGGATTTCCTTT--AGGTAGAGGCAagga--tttatctattttctttctactaACGGTAAGATATAATCTCTTTTGCAGT-----------ATCATGTGTATCTAAAGAATCTAAAAAGTCAATCAGAACAAAAAATGCTTTGGACTG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132917542 163 + 135778131 CAATGTCATTAA--T--------GCTTTGTCATT----CTTGCCCGGATTTCCTTT--AGGTAGAGGCAAGGA--TTTATCTATTTTCTTTCTACTAACGGTAAGATATAATCTCTTTTGCAGT-----------ATTGTGTATATCTAAAGAATCTAAAACGTCGATCAGAACAAAAAATGCTTTGGACTG i chlSab2.chr7 C 0 C 0 s mm10.chr8 84787689 177 - 129401213 CAATAGAAATAAGCT--------GCATAGACACTGTAATTCACATGGA---AATTC--ATGTGAGGATGATGAGTTTTGCCTATATTCTATCCAC-AACAATAATAAATAGTCTCTTTTGCAGTTTGAGAATCAAACTGTGTATACTTCAGGAATGTGGAATCTCTACTAGAATATGCAATGTTTT-CACCA i mm10.chr8 I 1 C 0 s canFam3.chr16 15783190 181 - 59632846 CAGTTCCATTAA--TCAGTGTAAGCACTGTAAAT----CCAAAGGAAAAATCATGTGCAGGT---GACAAAAA--TTTGTCTATTTTCTTCCCATTAACAGTAAAATATAGGCTCTTTTGCAGCCCAAGAATCATATGCTGTATATCTATGGAATATAAAATATCTATTAGAATATAAAATATCTTGTACTA i canFam3.chr16 C 0 I 692 a score=292528.000000 s hg38.chr4_KI270785v1_alt 117613 92 + 119912 TAGATGTCCTTACTTGGTGTTtgtgctgggctaaataat-acacctccaaggatgtccacgttctaatcccaggaacttgtgaaccttacctt s panTro4.chr4 190385376 92 + 193495092 TAGATGTCCTTACTTGGTGTTtgtgctgggctaaataat-acacctctaaggatgtccacgttctaatcccaggaacttgtgaaccttacctt i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195360997 92 + 198332218 TAGATGTCCTTACTTGGTGTTtgtgctgggctaaataat-acacctccacagatgtccacgttctaatcccagaaacttgtgaaccttacctt i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111321981 92 + 115148730 TAGATGTCCTTACTTGATGTTtgtgctgggctagataat-acacctccaaagatggccacgttctaaccccagaaacttgtgaaccttaccct i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181123007 92 + 184069350 TAGATGTCCTTACTTGGTGTTtgtgctgggctaaataat-acacctccaaagatgtccacgttctaatcccaggaacttgtgaaccttacgtt i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186461221 92 + 189454096 TAGATGTCCTTACTTGGTGTTtgtgctgggctaaataat-acacctccaaagatgtccacgttctaatcccaggaacttgtgaaccttacgtt i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176075908 92 + 178775436 TAGATGTCCTTACTTGGTGTTTGTGCTGGGCTAAATGAT-ACAcctccaaagatgtccacgtTCTAATCCCAGGAACTTGTGAACCTTACCTT i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132917705 92 + 135778131 TAGATGTCCTTACTGGGTGTTtgtgctgggctaaataat-acacctccaaagatgtccacgttctaatcccaggaacttgtgaaccttacctt i chlSab2.chr7 C 0 C 0 s mm10.chr8 84787866 93 - 129401213 AAGACATAATTATTTTATGGCtgtgctaggttgaataatggcctccccagagatgtctgcattatcatcctaggaattggtgaatgtttctct i mm10.chr8 C 0 I 174 s canFam3.chr16 15784063 90 - 59632846 TAAATATCCTTATTTGCTGGGtgtgctggactgaatata-atccttccagaaatggccacattttaatcccagagacttgtgaa--tgacctc i canFam3.chr16 I 692 C 0 a score=1508197.000000 s hg38.chr4_KI270785v1_alt 117705 590 + 119912 atgtgtcaaaagggaccttgctgat----------------atctcactatgggaagatgacctgattgtcctggtgggctctaagcatcatcgcgagacccttgtgagagggaggcggaggcagaagtgacctcagaagagggtgacgtggtggc----agagagacaggctatgctgccggctttgaagacggaaaaggagacacctgccaaggagtgcag-cagcttctacgggtgggaaaaggcaggaaaacagttctccagagcctcggaaggaacccgtcctgctgacactttgccttcagccttgtgagactgattttggatttctgacctccagaacattaagacagtaaattagcactgttttaagcaatggaatttgtggcaatttactacagcagcaataggaaactaacacaAGCAGTGGTAAAGCCCATTCTGGACTTAGCTCTCCTCTCCCCTGATAAGACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCCATGGTGTCTTTGTTTCTGGACATTGCAACCCCATAATTCAGAGAGGTAATCATAGAAAGGCATGTGGATAAGAACCAGGCATTGGTTCTGGGTCTTGATGAAAA s panTro4.chr4 190385468 590 + 193495092 atgtgtcaaaagggaccttgctgat----------------atctcactatgggaagatgacctgattgtcctggtgggctctaagcctcatcgcgagacccttgtgagagggagacggaggcagaagtgacctcagaagagggtgacgtggtgac----agagagacaggctatgctgccggctttgaagacggaaaaggggacacctgccaaggagtgcag-cagcttctacaggtgggaaaaggcaggaaaacagttctccagagcctcggaaggaacccgtcctgctgatactttgccttcagccttgtgagactgattttggatttctgacctccagaacattaagacagtaaattagcactgttttaagcaatggaatttgtggcaatttactatagcagcaataggaaactaacacaAGCAGTGGTGAAGCCCATGCTGGACTTAGCTCTCCTCTCCCCTGATAAGACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCTGTGGTGTCTTTGTTTCTGGACATTGCAACCCCATAATTCGGAGAGGTAATCATAGAAAGCCATGTGGATAAGAACCAGGCATTGGTCCTGGGCCTTGATGAAAA i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195361089 590 + 198332218 atgtgtcaaaagggaccttgtcgat----------------atctcactatgggaagatgacctgattgtcctggtgggctctaagcatcatcgcgagacccttgtgagagggaggtggagggagaagtgacctcagaagagggtgatgtggtgac----agagagacaggctatgctgctggctttgaagacggaaaaggggacacctgccaaggagtgcag-cagcttctacaggtgggaaaaggcaggaaaacagttctccagagcctcggaaggaacctgtcctgctgacactttgccttcagccttgtgagaccgattttggatttctgacctccagaacattaagacagtaaattagcactgttttaagcaatggaatttgtggcaatttactacagcagcaataggaaactaacacaAGCAGTGGTGAAGCCCATTCTGGACTTAGCTCTCCTCTCCCCTGATAAAACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCCATGGTGTCTTTGTTTCTGGACGTTGCAACCCCATAATTCTGAGAGGTAATCATAGGAAGGTGTGTGGATAAGAACCAGGCATTGGTCCTGGGCCTTGATGAAAA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111322073 590 + 115148730 atgtgtcaaaagagaccttgctgat----------------atctcactatgggaagatgacctgatagtcctggtgggctctaagcgtcatcgcaagacccttgtgagagggaggcgggaggagaagtgaccacagaagagggcgacgtggtgac----agagagacaggctacgccgccggctttgaagacggagaaggggacacctgccaaagagtacag-cagcttctacaggtgggagaaggcaggaaaacagttctccagagcctcggaaggaacccgtcctgctgacactttgccttcagccttttgagactgattttggatttctgacctccagaacattaagacagtaaattagcactgttttaagcaatggaatttgtggcaatttactacagcagcaataggaaacgaacacaAGCAGTGGTGAAGCCCGTTCTGGACTTAGCTCTCCTTTCCCCTGATAAAACCTCTATGCTGTGTGCCTCTTTGAGATTTCCCCATGGTGTCTTTGTTTCTGGACATTGCAGTCCCATAATTCTGAGAGGTAATCATAGGAAGGCTTGTGAATAAGAACCAGGCTTTGGTCCTGGGCCTTGATGAAAA i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181123099 582 + 184069350 atatgtcaaaagggacattgccaat----------------atctcattgtgggaagatgccctga----cctggtgggctctcagcgtcattgcaagacccttgtgagggggaggcggaaggagaagtgaccgcagaagagggcgacatggtgac----agagagacaggctacgccgccagctttgaagaccgagaaggggatacctgtcaaggagtgcag-cagcttctacaggtgggaaaaggcaggaaaacagttctgcagagcctcggaaggaacctgtcctgctgacaccttgccttcacccttgtgagactgattttggatttctgacctctagaatattaagacggtaaattagcactgttttaagcaatagaatgtatggcaatttactacagcagcaatagga----aacGCAAGCAGTGGTGAAGCCCATTCTGGACTTAGCTCTCCTTTTCCCTGATAAAACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCCACGGTGTCTTTGCTTCTGGACATTCCAGTCCCATACTTCTGAGAGGTGACCATAGGAAGGCGTGTGGATAAGAAGCAGGCATTGGTCCTGGGCCTTGATGAAAA i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186461313 582 + 189454096 atatgtcaaaagggacattgccaat----------------atctcattgtgggaaaatgccctga----cctggtgggctctcagcgtcattgcaagacccttgtgagggggaggcggaaggagaagtgaccgcagaagagggcgacatggtgac----agagagacaggctacgccgccagctttgaagaccgagaaggggacacctgtcaaggagtgcag-cagcttctacaggtgggaaaaggcaggaaaacagttctgcagagcctcggaaggaacctgtcctgctgacaccttgccttcacccttgtgagactgattttggatttctgacctctagaatattaagacggtaaattagcactgttttaagcaatagaatgtatggcaatttactacagcagcaatagga----aacGCAAGCAGTGGTGAAGCCCATTCTGGACTTAGCTCTCCTTTTCCCTGATAAAACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCCACGGTGTCTTTGCTTCTGGACATTCCAGTCCCATACTTCTGAGAGGTGACCATAGGAAGGCGTGTGGATAAGAAGCAGGCATTGGTCCTGGGCCTTGATGAAAA i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176076000 582 + 178775436 ATATGTCAAAAGGGACATTGCCAAT----------------ATCTCATTGTGGGAAGATGCCCTGA----GCGGGTGGGCTCTCAGCGTCATTGCAAGACCCTTGTGAGGGGGAGGCGGAGGGAGAAGTGACCGCAGAAGAGGGCGACATGGTGAC----AGAGAGACAGGCTACGCCACCAGCTTTGAAGACCAAGAAGGGGACACCTGCCAAGGAGTGCAG-CAGCTTCTGCAGGtgggaaaaggcaggaaaatagTTCTGCAGAGCCTCAGAAGGAACCTGTCCTGCTGACACTTGCCTTTCACCCTTGTGAgactgattttggatttctgaccttCAGACTATTAAGACGGTAAATTAGCACTGTTTTAAGCAGTAGAATGTATGGCAATTTactacagcagcaatagga----aacgcAAGCAGTGGTGAAGCCCATTCTGGACTTAGCTCTCCTCTCCCCTGATAAAACCTCTATGCTGTATGCCTCTTAGAGATTTCCCCACAGTGTCTTTGCTTCTGGACATTCCAGTCCCATAATTCTGAGAGGTAATCATAGGAAGGCGTGTGGATAAGAAGCAGGCATTGGTCCTGGGCCTTGATGAAAA i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132917797 582 + 135778131 atatgtcaaaagggacattgccaat----------------atctcattgtgggaagatgccctga----cctggtgggctctcagcatcatcgcaagacccttgtgagggggaggcggagggagaagtgaccacagaagagggcgacatggtgac----agagagacaggctacgccgccagctttgaagaccgagaaggggacacctaccaaggagtgcag-cagcttctgcaggtgggaaaaggcaggaaaacagttctgcagagcctcggaaggaatctgtcctgctgacactttgccttcacccttgtgagactgattttggatttctgacctccagaatatcaagacggtaaattagcactgttttaagcaatagaatgtatggcaatttactacagcagcaatagga----aacACAAGCAGTGGTGAAGCCCATTCTGGACTTAGCTCTTCTCTCCCGTGATAAAACCTCTATGCTGTGTGCCTCTTAGAGATTTCCCCACGGTGTCTTTGCTTCTGGACATTCCAGTCCCATCATTCTGAGAGGTAATCATAGGAAGGCGTGTGGATAAGAAGCAGGCATTGGTCCTGGGCCTTGATGAAAA i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15784153 546 - 59632846 ctatggcaaaagggactttgccaatatgataaaagttaaggatctccatatagagagatgat--------cctggtaggacctaaatgtcatcacagggtctttacaagaaagagggagagggagatttgattacagaaaaggaaggtaccctgatgccaaaagcaagatgctatgctactc-ctttgaagatggaggaggggctacctgccagggaatgtagatggcttttagaagtgggaaaaggcgaggaaatacccct--agagcct---------------ctgctgacccattgtctttagtcgggtgagactgattttggact--tgactttcaaaactgtaagataatgtatttaccctgttttaagccattaagtgtgtggcgatttcttatagcagcagtagaa----aactaaCCTGGTGTTGGAGCCTATTCTGGATTTTGTTC-----TTTCCTGATAAAATCCCTATCAAGGAT-----TTGGATGTCTCAC-ATAGCACATTTGCCTCTGGATATTTTACTCCCATAATTCCA------------AGGAAGGTATTTGGA--------AGGGATAGGCCTGGGG--TTGATGAAAG i canFam3.chr16 C 0 C 0 e mm10.chr8 84787959 174 - 129401213 I a score=2172753.000000 s hg38.chr4_KI270785v1_alt 118295 960 + 119912 TCTTTCTCTGttaaaacaacatcgagacactaccatacacctatcagaatgatgaaaatccagagcactgacgccaccaattgctggcaaaggtgtgaagcaacaggaactgtcatccgttgctggtgggaatgcagaatggcacagccactttggaagacagtttggcagcctcttctgaagcaaaacatgcttttacgataggagcctgaaattgctttccttggtattcacccaaatgagctgaaaatacatgtccacacaaaaatctgcaagtacatgcttatagcagctttactgataattgcccaaacttggaagcaacaaagatgtccagtaggtgaatgcgtcaataaattgtggtacatccagacaatggaatatttttaaagtgct-aaaaaaaaaatgagccatcaaaccatgagaagacacagaagaaccttaaatgcatattactaagtaaataaaagaatccaatctgaaaagggtacatactgtacaactgaactctatgacactctggaaaagacacagct-tggggacaatgaaaagataatggttgccagggtttttggggagggagggaggaataagcagaaaacaggatttttaggacggtggaactatttcgtaggatggtacagtggtgcacac--gttgttatatatttgtcaaaacccgtagaatgtgcaacactgagagcaaaccctaatggaac--gtggactctgggtgatggtgatatgacattgcaggtgcatcagttgtaacaaatgtcccactcgaataatggatgttgagagtggggtggctgtgtgtgcgggggtgggtgggggcttgtgggaaatctctgtatgttctgatcaattttgctgtaagcttaaaacttctctt--taaagaag-agtgtatttaCCAGTAAACatttacatatatatatatatgagatatacatatatctatatata s panTro4.chr4 190386058 954 + 193495092 TCTTTCTCCGttaaaacaacatcgagacactaccatacacctatcagaatgatgaaaatccagagcactgatgccaccagttgctggcaaaggtgtgaagcaacaggaactgtcatccgttgctggtgggaatgcagaatggcacagccactttggaagacagtttggcagcctcttctaaagcaaaacatgcttttacgataggagcctgaaattgctttccttggtattcacccaaatgagctgaaaatacatgtccacacaaaaatctgcaagtacatgcttatagcagctttactgataattgcccaaacttggaagcaacaaagatgtccagtaggtgaatgcatcaataaattgtggtacatccagacaatggaatattttaaaagtgct--aaaaaaaaatgagccatcaaaccatgagaagacacaggagaaccttaaatgcatattactaagtaaataaaagaatccaatctgaaaagggtacatactgtacaactgaactctatgacactctggaaaagacacaact-tggggacaatgtaaagataatggttgccagggtttttgaggagggagggaggaataagcagaaaacaggatttttaggacggtggaactatttcgtaggatagtacagtggtgcacac--gttgttatatgtttgtcaaaacccgtagaatgtgcaacactgagagcaaaccctaatggaac--gtggactctgggtgatggtgatatgacattgcaggtgcatcagttgtaacaaatgtcccactcgaataatggatgttgagagt-gggtggctgtgtgtgcgggggcgggtgggggcttgtgggaaatctctgtatgttctgctcaattttgctgtaagcttaagacttctctt--taaagaag-agtgtatttaCCAGTAAACATTtac----atatatatatgagatatacatatatctatatata i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195361679 948 + 198332218 TCTTTCTCaattaaaacagcatcgagacactaccatacacctatcagaatgacgaaagtccagagcactgatgccaccaattgttggcaaaggtgtgaagcaacaggaactgtcattcgttgctggtgggaatgcagaatggcacagccactttggaagacagtttggcagcctcttctaaagcaaaacatgcttttaccacaggagccagaaatcgctttccttggtattcacccaaatgagttgaaaatacatgtctacacaaaaatctgcatgtacatgtttatagcagctttatcgataattgtccaaacttggaagcaacaaagatgtccagcaggtgaatgcatcaataaactgtggtacatccagacaatggaatattttaaaagtgct--aaaaaaaaatgagccatcaaaccatgagaagacacagaagaaccttaaatgcatattactaagtaaataaaagaatccaatatgaaaagggtacatactgtgcaattgaactccatgacactctggaaaagacacaact-tggggacaatgaaaagataatggttgccagggtttgtggggagggagggaggaataagtagaaaacaggatttttaggacagtggaactatttcgtaggatagtacagtggtgcacac--gttgttatatatttgtcaaaacccttagaatgtgcaacaccgagagcaaaccctaatggaat--gtggactctgggtgatggtgatatgacattgcaggtgcatcagttgtaacaaatgtctcactcgaataatggatgttgagagtggggtggctgtgtgtgcaggggcgggtgggggcttgtgggaaatctctgtatattctgctcaattttgctgtgagcttaaaacttctctt--taaagaagaagtgtatttaCCAGTAAAC----------ATGTATATATGAGATAT--ATATATCTATACATA i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111322663 951 + 115148730 TCTTTCTCaattataacaacatcgagatactaccatacacccatcagaatgatgaaagtccagagcattgatgccaccaattgctggcaaaggtgtgaagcaacaggaactgtcattcgttgctggtgggaatgcagaatggaacagccgctttggaagacagtttggcagcctcttctaaagcaaaacatgcttttaccataagggccagaaatcgctttccttggtattcacccaaatgagttgaaaatacacgtccacacaaaaatctgcacgtacatgcttatagcagctttattgataattgcccaaacttggaagcaacaaagatgtccagtaggtgaatgcatcaataaactgtggtacatccagacaatggaatattttaaaagtgct--aaaaagaaatgagccatcaaaccatgagaagacacagaagaaccttaaatgcatattactaagtaaataaaagaatccaatctgaaaagggtacatactgtacaactgaactctatgacactctggaaaagacacaact-tggggacaatgaaaagataatggttgccagggtttgtggggagggagggaggaatgagcagaaaacaggatttttaggacagtgtaactatttcgtaggatagtacagtggtgcacgt--gttgttatatatttgtcaaaacccttagaatgtgcaacactgagagaaaaccctaatggaacatgtgaaatctgggtgatggtgatatgacattgcaggtgcatcagttgtaacaaatgtcccactcgaatgatggatgttgagagtggggtggctgtgtgtgcaagggcgggtgggggcttctgggaaatctctgtatgttctgctcaattttgctgtgagcttaaaacttctctttataaagaag-agtgtatttaCCAGTAAAC----------atatatatatgagatat--atatatctatatata i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181123681 952 + 184069350 TCTTTCCCaattaaaacaacatcgagataccaccacacacctatcagagtgatgaaaatccagagcactgacgccaccaattgctggcaagggtgtgaagcaacaggaactgtcattcattgctggtgggaatgcagaatggcacagccactttggaagacagtttggcagtctcctctaaagcaaaacatgcttttaccataggagccagaaatcacttgccttggaatttacccaaatgagttgaaaatatatgtccaca-aaaaatctgcacgtacatgtttatagcagctttattgataattgcccaaacttggaagcagcaaagatgtccagtaggtgaatgcatcaataagctgtggtacatccagacaatggaatattttaaaagtgct-aaaaaggaaatgagccatcaaaccatgtgaagacaccgaagaaccttagaagcatattactaagtaaatagaagaagccagtctgaaaagggtacatcctgtacaattgaactctatgacactctggaaaagacacaactatggggacaatgaaaagataatggttgccagggtttgtggggtgggagggatgactaagcagaaaacggaatttttaggacggtggaactatttcgtaggatagtacagtgatgcacacatgttgttacgtctttgtgaaaactcatagaatgtgcaacgccgagagcacaccctaatggaacgtgtggactctgcatgatggtgacatgtcattgcaggtgcatctgttttagcaaatgtctcactcgaatgatggatgttgagagtggggtggctgtgtgtgcagggatgggtgcaggctcatgggaaatctctgtatgttctgctaaattttgctgtaagcttaaaacttctctt--taaagaag-tgtgtatttaCCAATAAAC----------ATATATATATGTTATAT--ATGTACCTATATATG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186461895 960 + 189454096 TCTTTCCCaattaaaacaacatcgagataccaccacacacctatcagagtgatgaaaatccagagcactgacgccaccaattgctggcaagggtgtgaagcaacaggaactgtcattcattgctggtgggaatgcagaatggcacagccactttggaagacagtttggcagtctcctctaaagcaaaacatgcttttaccataggagccagaaatcacttgccttggaatttacccaaatgagttgaaaatatatgtccaca-aaaaatctgcacgtacatgtttatagcagctttattgataattgcccaaacttggaagcagcaaagatgtccagtaggtgaatgcatcaataagctgtggtacatccagacaatggaatattttaaaagtgct-aaaaaggaaatgagccatcaaaccatgtgaagacaccgaagaaccttagaagcatattactaagtaaatagaagaagccagtctgaaaagggtacatcctgtacaattgaactctatgacactctggaaaagacacaactatggggacaatgaaaagataatggttgccagggtttgtggggtgggagggatgactaagcagaaaacggaatttttaggacggtggaactatttcgtaggatagtacagtgatgcacacatgttgttacgtctttgtgaaaactcatagaatgtgcaacgccgagagcacaccctaatggaacgtgtggactctgcatgatggtgacatgtcattgcaggtgcatctgttttagcaaatgtctcactcgaatgatggatgttgagagtggggtggctgtgtgtgcagggatgggtgcaggctcatgggaaatctctgtatgttctgctaaattttgctgtaagcttaaaacttctctt--taaagaag-tgtgtatttaCCAataaacatatatat--atatatatatgttatat--atgtacctatatatG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176076582 959 + 178775436 TCTTTCCCAATTAAAACAACATGGAGATACCACCACACACCTATCAGAGTGATGAAAATCCAGAGCACTGACGCCACCAATTGCTGGCAAGGGTGTGAAGCAACAGGAACtgtcattcattgctggtgggaatgcagaatggcacagccactttggaagacagtttggccgTCTCTTCTAAAGCAAAACATGCTTTTACCATAGGAGCCAGAAATCACTTGCCTTGGAATTTACCCAAATGAgctgaaaatatatgtccacacaaaaatctgcaggtacatgtttatagcagctttattgataattgcccaaacttggaagcagCAAAGATGTCCAGTAGGTGAATGCATCAATAagctgtggtacatccagacaatggcatattttaaaagtgCT-AAAAAGGAAATGAGCCATCGAACCATGTGAAGACACCGAAGAACCTTAAAAGCATATTACTAAGTAAATagaagaagccagtctgaaaagggtACATCCTGTACAATTGAACTCTATGACACTCTGGAAAAGACACAACTATGGGGACAATGAAAAGATAACGGTTGCCCGGGtttgtggggtgggagggatgACTAAGCAGGAAACGGAATTTTTAGGACGGTGGAACTATTTCGTAGGATAGCACAGTGATGCACACGTGTTGTTACGTCTTTGtgaaaacccatagaatgtacaacaccgaGAGCACACCCTAATGGAGCGTGTGGACTCTGCGTGATGGTGACATGTCACTGCAGGTGCATCTGTTTTAGCAAATGTCTCACTCGAATGACGGATGTTGAGAGTGGGCTGGC--TGTGTGCAGGGATGGGTGCGGGCTCATGGGAAATCTCTGTAGGTTCTGCCAAATTTTGCTGTGAGCTTAAAACTTCTCTT--TAAAGAAG-TGTGTATTTaccaataaacatatatat--atatatatgtgttatat--atgtacctatatatg i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132918379 957 + 135778131 TCTTTCCCaattaaaacaacatggagataccaccacacacctatcagagtgatgaaaatccagggcactgacgccaccaattgctggcaagggtgtgaagcaacaggaactgtcattcattgct-ctgggaatgcagaatggcacagccactttggaagacagtttgacagtctcttctaaagcaaaacatgcttttaccataggagccagaaatcacttgccttggaatttacccaaatgatttgaaaatatatgtccacacaaaaatctgcacgtacatgtttatagcagctttattgataattgcccaaacttggaagcagcaaagatgtccagtaggtgaatgcatcaataagctgtggtacatccagacaatggaatattttaaaagtgctaaaaaaggaaatgagccatcaaaccatgtgaagacaccgaagaaccttaaaagcatattactaagtaaatagaagaagccaatctgaaaacggtacatcctgtacaattgaactctatgacactctggaaaagacacaactatggggacaatgaaaagaaaagggttgccagggtttgtggggtgggagggatgactaagcagaaaacggaatttttaggacggtggaactatttcgtaggatagtacagtgatgcacacatgttgttatgtctttgtcaaaacacatagaatgtgcaacaccgagagcaaaccctaatggaacgtgtggattctgcgtgatggtgacatgtcattacaggtgcatctgttttagcaaatgtctcactcgaatgacagatgttgagagtggggtggctgtgtgtgcagggatgggtgtgggctcatgggaaatctctgtatgttctgctaaattttgctgtgagcttaaaacttctctt--taaagaag-tgtgtatttaCCAataaac----atat--atatatatatgttatat--atgtatctatatatG i chlSab2.chr7 C 0 C 0 e canFam3.chr16 15784699 0 - 59632846 C e mm10.chr8 84787959 174 - 129401213 I a score=971540.000000 s hg38.chr4_KI270785v1_alt 119255 374 + 119912 tttaACTTAGAGCCTCTGG--------CAGGGGACAGCAACCAAGGATCCATGTGTCTGGTT-GGCTCTAGGGAAGCCTGACCTTCACAGTTAGACTTGGGGGTTCCCCTGGGAATACACAGTGGGCAGCCACCTTTCCAAAGGATGGGATGA-CCAGGCCGGATTTTGGTACCTCTTCTCT--CCCCGTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGAGACACCACATTCTCTGGCAGAGGAGCTCTACAAAGTGCAGTAAATTCCTGGGATCATAT----------------------GAGTGATGAAGCCCAGAAATTGCCCAGGGAAGGAAGTTAGC-AAACTTAAGAGTAA---GTCCTTTGGCCCAATTTTAACGGACAAG s panTro4.chr4 190387012 374 + 193495092 tTTAACTTAGAGCCTCTGG--------CAGGGGACAGCAACCAAGGATCCATGTGTCTGGTT-GGCTCTAGGGAAGCCTGACCTTCACAGTTAGACTTGGGGGTTCCCCTGGGAATACACAGTGGGCAGCCACCTTTCCAAAGGATGGGATGA-CCAGGCCGGGTTTTGGCACCTCTTCTGT--CCCCGTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGAGACACCACATTCTCTGGCAGAGGAGCTCTACAAAGTGCAGTAAATTCCCGGGATCATAT----------------------GAGTGGTGAAGCCCAGAAATTGCCCAGGGAAGGAAGTTAGC-AAACTTAAGAGTAA---GTCCTTTGGCCCAATTTTAACAGACAAG i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195362627 373 + 198332218 TTTAACTTAGAGCCTCTGG--------CAGGGGACAGCAACCAAGGATCCATGTGTCTGGTT-GGCTCTAGGGAAGCCTGACCTTCAGAGTTAGACTTGGGGGTTCCCCTGGGAATACACAGTGGGCAGCCACCTTTCCAAA-GACGGGATGA-CCAGGCCAGGTTTTGGTATCTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGAGACACCACATTCTCTGGCGGAAGAGCCCTACAAAGTGCAGTAAATTCCTGGGATCATAT----------------------GAGTGATGAAGCCCAGAAATTGCCCAGGGAAGGAAGTTAGC-AAACTTAAGAGTGA---GTCCTTTGGCCCAATTTTAACAGACAAG i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111323614 368 + 115148730 tttaACTTAGAGCCTCTGG--------TAGGGGACAGCAACCAAGGATCCATGTGTCTGGTT-GGCTCTA-GGAGGCCTGACCTTCAGAGTTAGACTTGGGGGTTCCCCTGGGAATACACAGTGGGCAGCCACCTTTCCAAA-GATGGGATGA-CCAGGCCAGGTTTTGGTACCTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGAGACACCACATTCTCTGGCGGAGGAGCCCTACAAAATGCAGTAAATTACTGGGATCATAT----------------------GAATGATGAAGCCCAGAAATTGCCCAGGGAAGGAAGTTAGA-AGACTTAAG----A---GTCCTTTGGCCCAATTTTAACAGACAAG i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181124633 374 + 184069350 TTTAACTTAGAGTCTCTGG--------CAGGGGACAGCAACCAAGGATCCCTGCATCTGGTT-TGCTCTA-GGGAGCCTGACCTTCAGAGTTAGACTTGGGGGTTCCCCTGGGAATACACGGCGGGCAGCCACCTTTCCAAAGGACGGGATGA-CCAGACTGGGTCTTGGTACTTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGGGACACCACATTCCCTGGCGGAATGGCCCTACAAAATGCAGTAAAGTCCTGGGATCATAC----------------------GAGTGATGAAGCCCAGAAATTGCTCAGGGAAGCAAGTCAGCTTAACTTAAGAGTGA---GTCCTTTGGTCCAATTTTAACAGACAAG i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186462855 374 + 189454096 TTTAACTTAGAGTCTCTGG--------CAGGGGACAGCAACCAAGGATCCCTGCATCTGGTT-TGCTCTA-GGGAGCCTGACCTTCAGAGTTAGACTTGGGGGTTCCCCTGGGAATACACGGCGGGCAGCCACCTTTCCAAAGGACGGGATGA-CCAGACTGGGTCTTGGTACTTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGGGACACCACATTCCCTGGCGGAATGGCCCTACAAAATGCAGTAAAGTCCTGGGATCATAC----------------------GAGTGATGAAGCCCAGAAATTGCTCAGGGAAGCAAGTCAGCTTAACTTAAGAGTGA---GTCCTTTGGTCCAATTTTAACAGACAAG i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176077541 374 + 178775436 tTTAACTTAGAGTCTCTGG--------CAGGGGACAGCAACCAAGGATCCCTGCGTCTGGTT-TGCTCTA-GGGAGCCTGACCTTCAGAGTTAGACTTGAGGGTTCCCCTGGGAATACACGGCGGGCAGCCACCTTTCCAAAGGACGGGATGA-CCAGACTGGGTCTTGGTACTTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAAtggacagatgaacagataaaccaAGAAGAGACACCACATTCCCTGGCGGAATGGCCCTACAAAATGCAGTAAAGTCCTGGGATCATAT----------------------GAGTGATGAAGCCCAGAAATTGCTCAGGGAAGCAAGTCAGCTTAACTTAAGAGTGA---GTCCTTTGGTCCAATTTTAACAGACAAG i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132919336 374 + 135778131 TTTAACTTAGAGTCTCTGG--------CAGGGGACAGCAACCAAGGACCCCTGCGTCTGGTT-GGCTCTA-GGGAGCCTGACCTTCACAGTTAGACTTGGGGGTTCCCCTGGGAATACACGGCGGGCAGCCACCTTTCCAAAGGACGGGATGA-CCAGACTGGGTCTTGGTACTTCTTCTCT--CCCCCTCACCCTGCTTCACAGGATGAGGGAATGGACAGATGAACAGATAAACCAAGAAGAGACATCACATTCCCTGGCGGAGTGGCCCTACAAAATGCAGTAAAGTCCTGGGATCATAT----------------------GAGTGATGAAGCCCAGAAATTGCTCAGGGAAGCAAGTCAGCTTAACTTAAGAGTGA---GTCCTTTGGTCCAATTTTAACAGACAAG i chlSab2.chr7 C 0 C 0 s canFam3.chr16 15784699 393 - 59632846 TCTCACTCAAAACTTCTGGAAAGTTTCCAGGGGAAACCAACTAGGGATCTGTGGGTCTGGCTGGGCTCTCCATAAGCCTGTCTGTGGGAACTAGACAAGGTGTTTCTCTCAG-----TACAATGTTCGGCAGCCAGTCCTTAGGAGGAAATGATCCAGCCTGGGTCCTGGCACCTGGTATCCTGCCCACTTATGC--------------AGATCATGGATAAGATGATGAATAAACCAAGAGGAGAAGCCAGATTCTCTGATAAAATATCCCTATAAAGTACAATAAATTACTGGAATCATTTAATCAAAGGAGACAGACATTCAGAATGATGAAGCCCAGGAATTGCCCAGGGAAGGAAATTAGCATAATTTAAGAGTAATTTTTTTTTTGGTACTATTTTAACAGATAAG i canFam3.chr16 C 0 C 0 e mm10.chr8 84787959 174 - 129401213 I a score=674204.000000 s hg38.chr4_KI270785v1_alt 119629 252 + 119912 ----GTAAAAAGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTTGTTTACCCCCCGCCGCATCCTCAG--------------------GCCTTTCAAA-----------ATGAGAGGATGCC-------CACTGTGAGCCAGCCGCTCTCTTGGC---AAGCCGGCTGGCCACAAAGAGGCTCAGTCATAATCGGGTGGAAACATACACTCTCCCCTTTTTA-TTGGCGGCTTGAGGCTT--GGTGA-TTG--------GCCTATA--------AATCTAAACTGCAAGCGCAGAGCCTGTGTTTGGG- s panTro4.chr4 190387386 252 + 193495092 ----GTAAAAAGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTTGTTTACCCCCCGCCGCATCCTCAG--------------------GCCTTTCAAA-----------ATGAGAGGATGCC-------CACT-TGAGCCAGCCGCTCTCTTGGC---AAGCCGGCTGGCCACAAAGAGGCTCAGTCATAATCGGGCGGAAACATACACTCTCCCCTTTTTA-TTGGCGGCTTGAGACTT--GGTGAGTTG--------GCCTATA--------AATCTAAACTGCAAGCACAGAGCCTGTGTTTGGG- i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195363000 253 + 198332218 ----GTAAAAAGAATAATTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTTGTTTACCCCCCACGGCATCCTCAG--------------------GCCTTTCAAA-----------ATGAGAGGATGCC-------CACTGTGAGCCAGCCGCTCTCCTGGC---AAGCTGGCTGGCCACAAAGAGGCTCAGTCATAATTGGGTGGAAATATAAACTCTCCCCTTTTTA-TTGGTGGCTTGAGACTT--GGTGAGTTG--------GTCTATA--------AATCTAAACTGCAAGCACAGAGCCTATGTTTGGG- i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111323982 253 + 115148730 ----GTAAAAAGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTTGTTTACACCCTGCAGCATCCTCAG--------------------GCCTATCAAA-----------ATGAGAGGATGCC-------CACTGCGAACCAGCCGCTCTCTTGGC---AAGCCGGCTGGCCACAAAGAGGCTCAGTCGTAATCGGGTGGAAACATACACTCTCCCCTTTTTA-TTGGTGGCTTGAGACTT--GGTGAGTTG--------GTCTATA--------AATCTAAACTGCAAGCACAGAGCCTATGTTTGGG- i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181125007 251 + 184069350 ----GTAAAAGGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTGATTTAC-CCACACGGCATCCTCAG--------------------GCCTTTCAGA-----------ACAAGAGGATGCC-------CACAGTGAGCCAGCCTCCCTCTTAGC---AAGCCAGCTGGCCACAA--AGGCTCAGTCATAACCGGTTGGAAACATAAACTCTCCCTTTCTTCTTTGGTGGCTTGAGACTT--GGTGAGCTG--------GTCTATA--------AATCTAAACTGCAAGCACAGAGCCTATGTTTGGG- i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186463229 251 + 189454096 ----GTAAAAGGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTGATTTAC-CCACGCGGCATCCTCAG--------------------GCCTTTCAGA-----------ACAAGAGGATGCC-------CACAGTGAGCCAGCCTCCCTCTTAGC---AAGCCAGCTGGCCACAA--AGGCTCAGTCATAACCGGTTGGAAACATAAACTCTCCCTTTCTTCTTTGGTGGCTTGAGACTT--GGTGAGCTG--------GTCTATA--------AATCTAAACTGCAAGCACAGAGCCTATGTTTGGG- i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176077915 251 + 178775436 ----GTAAGAAGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACGTGCTTGATTTAC-CCACGCGGCATCCTCAG--------------------GCCTTTCAGA-----------ACGAGAGGATGCC-------CACAGTGAGCCAGCCACTCTCTTAGC---AAGCCAGCTGGCCACAAAGAGGCTCAGTCATCACCGGTTGGAAACATAaactctccctttcttctttggtGGCTTGAGACTT--GGTGAGCTG--------GTCTATA--------AATCTAAACTGCAAG--CAGAGCCTATGTTTGGG- i papAnu2.chr5 C 0 C 0 s chlSab2.chr7 132919710 253 + 135778131 ----GTAAGAAGAATAGTTGGTGTAACATCTGA--AGTTTGGAAACACATGCTTGATTTAC-CCACGCGGCATCCTCAG--------------------GCCTTTCAGA-----------ACGAGAGGATGCC-------CACAGTGAGCCAGCCACTCTCTTAGC---AAGCCAGCTGGCCACAAAGAGGCTCAGTCATAACCGGTTGGAAACATAAACTCTCCCTTTCTTCTTTGGTGGCTTGAGACTT--GGTGAGCTG--------GTCTATA--------AATCTAAACTGCAAGCACAGAGCCTATGTTTGGG- i chlSab2.chr7 C 0 N 0 s mm10.chr8 84788133 280 - 129401213 ----GTAAAGAGAATAGAACGGCTAACACTTGA--CGTTTAGAGACCTATGCTTGATTTATCGTGCATGACAGCCTTTGTTTCTTTTATTTGTTTGTCTGTTTCCCAAA-----------AGCCAAGACTGACGAGGAAACACTGATCACACACCACCTACTCAGTGCAAAGCTGGATGGCCACGAGTAGAT-------------GCTTTAGCCATTAACTTTCACATCTTTT-GTGGGGGCTTATGACTCTAAATAAGTTG--------GTCTTTACAGCAAGGAGCTTATATTTCAAGCCTAGAGCCTCTGCTTTTG- i mm10.chr8 I 174 I 1 s canFam3.chr16 15785092 275 - 59632846 AAGTATAAAAAGAAAAG---GTACAACATCTGAGGGGTTTGGGAACCTATGCTTTATTTGCCCTGTGCAGCATCCTTA---------------------GCTTTTCACAAGTGAGAAATGACAAGAGAATGGT-------TACCATCAGCCAGCTACACTCTTGGC---AAGCAGGCTGGCCACAGAGCGGCTCAGTCATATTCGGGTGGGTATATCAACTCTCACTTTCCTT-TTGGTGCCTTAAGACTT--AGTAAGTTGTTTCAGAAACCAATA--------AATCTAAATTGCAAGCACAGAGTCTACATTTCTGT i canFam3.chr16 C 0 C 0 a score=34996.000000 s hg38.chr4_KI270785v1_alt 119881 14 + 119912 GTCGTGATCCGTTT s panTro4.chr4 190387638 14 + 193495092 ATCATGATCCGTTT i panTro4.chr4 C 0 C 0 s ponAbe2.chr4 195363253 14 + 198332218 ATCATGATCTGTTT i ponAbe2.chr4 C 0 C 0 s nomLeu3.chr7b 111324235 14 + 115148730 ATCATGATCTGTTT i nomLeu3.chr7b C 0 C 0 s rheMac3.chr5 181125258 14 + 184069350 ATCATGATCTGTTT i rheMac3.chr5 C 0 C 0 s macFas5.chr5 186463480 14 + 189454096 ATCATGATCTGTTT i macFas5.chr5 C 0 C 0 s papAnu2.chr5 176078166 14 + 178775436 ATCATGATCTGTTT i papAnu2.chr5 C 0 C 0 s mm10.chr8 84788414 14 - 129401213 ATCCAAATTCATTT i mm10.chr8 I 1 N 0 s canFam3.chr16 15785367 14 - 59632846 ATCATCATCTGTTT i canFam3.chr16 C 0 C 0 a score=38682.000000 s hg38.chr4_KI270785v1_alt 119895 17 + 119912 -GCCACAGGCACACTGGT s panTro4.chr4 190387652 17 + 193495092 -GCCACAGGCACACTGGT i panTro4.chr4 C 0 N 0 s ponAbe2.chr4 195363267 17 + 198332218 -GCCACAGACACACTGGT i ponAbe2.chr4 C 0 N 0 s nomLeu3.chr7b 111324249 17 + 115148730 -GCCACAGGCACACTGGT i nomLeu3.chr7b C 0 N 0 s rheMac3.chr5 181125272 17 + 184069350 -GCCACAGGCACACTGGT i rheMac3.chr5 C 0 N 0 s macFas5.chr5 186463494 17 + 189454096 -GCCACAGGCACACTGGT i macFas5.chr5 C 0 N 0 s papAnu2.chr5 176078180 17 + 178775436 -GCCACAGGCACACTGGT i papAnu2.chr5 C 0 N 0 s canFam3.chr16 15785381 18 - 59632846 GCCCCCGGGCACTCTGAT i canFam3.chr16 C 0 N 0