##maf version=1 scoring=roast.v3.3 a score=351411.000000 s hg38.chrUn_GL000218v1 0 1484 + 161147 GAATTCATGTAAAGAAAGACCATGGGTGTTTGTACTGGATTTAGTATTCATCATTCGACTGCATGACTCTCCCCTAGCGCCATAATTTTACTAATGAATTTTTCACATACTACTCAGCTGGCCACTGAACCTAACCAGCAACCCACCCTCAACCATTCAGTGGTCTTTTGTTCT---CTGTTCCTCCTGAATGTTGATTACTCTCAGAAGATGATAAAAACTTGGAtttctttttttttctttc------tagagacagggtcttgttctgtcacccaggctgcagtgcggtggcatgatcttggttcactgcagcctgaaa-ccctggactcaaacagtcctcccacctcagcctcccaagtagctgggacta-cata-catttgcccctatgcccagctaacttctttattttttattgtacagacagaaacttgctgtgttgctcaggatgttgtcagacttctggcctcaagtgatcattctgcctcagcttcccaaagtgcttggattatacgtaggtgggagccaccTGTGTTCAAAGACCAttttctttttctttctttcttttggagatggactctctctctgtcacgcaggctggaatgcagtggcatgaactcggctgactgcaacctccacctccctggttcaagcaactcccctgcctcagcctcccaactagctggaattacaggcacatgtcaccactctcagctaatatttttgtatttttagtagagacagggtttcattatgttggccagactgatctcgaactcctgaaatcaggcaa-tccacccaccttggcctcccagtg-tgctgagatcagaggcgtgagtcaccaagccATGCCCAGATATTTTTAAAAtaataacgttattgaaatatgattaacgtatcatgcaattcatttatcaaagtacacaattcaggccaggtgcagtggctagttcctataacgctaagactttgggcagctgaggcaggtggatcgcttgtgttcaggagtttgcgactagcctgggcaacatggcaaaacaacatctctagcaaaaatacaaaaattagctgggtgtggtggctcatgcct-gtagtcccaactacttggggacgtgagactggaagatcacttgagtccagaagccataggttgcagtgagaccagatggcaccactgcactacagcatgggtgacaaaaggagaccctgtctttaaataactaaagaaaaaaagaaagtatacaattgagtggtttttagaatattcaaggagctgtgcatccatcaccacagtctttcttagaagtgattacccacttatgagttacccatttatgagtgagaaaccctcacctcttagccactacctcctacagcccccatgttc----------ataggcaaccactgatttattttctgtcattgtagttttgcctaatctggaccttttatagaaatagaattgtacagtgtgtgatcttttgtagtttccttttttt s panTro4.chr2A 18522641 1478 - 113622374 GAATTCATGTAAAGAAAGAACGTGGGCGTTTGTACTGGATTTAGTATTCATCATTCGACTGCATGACTCACCCCTAGCACCATAATTTTACTAATAAATTTTTCAGATACTactcagctagtgactgagcctaaccagcaacccaccctcaaccattcagtggtcttttgttcttctctgttcctcctgaacgttgattactctcagtaggtgataaaaacttgcatttctttTTTCCCCCCCC-----CTAgagacagggtcttgctctgtcacccaggctgcagtgcagtggcgtgatcatggctcactgcagcctgaaa-ccccgggctcagatagtcctcccacctcagcctcccaagtagctgggactaacataacatttgcccctatgcccagctaacttctttattttttattgtacaggcgggatcttgctatgttgtccaggatggtgtcaagttcctggcctcaagtgatcattctgcctcagctacccaaagtgcttggattgtacgtaggtgggagccaccTGTGTTCAATGCCCAttttctttt-----ctttctttttgagacggactcttgctctgtcacggaggctggagtgcagtggcatgatctcggctggctgcaacctccacctccctggttcaagcagttcccctgcttcagcctcccgactagctggcattacaggcacataccaccactcccagctaatgtttttgtatttttactagagacggagtttcagtgtgttggccagactggtctcgaactcctgaaatcaggcaagtccgcctgccttggcttcccaaag-cgctgagattacaggcgtgagccaccacacccggccC-----TTTTTAAAAtaataataatattgaaatatgattaacatat---gcaattcatttatcaaagtatgcaattcaggccaggcgcagtggctaattcctataatgctaagactttgggtggctgaggcaggtggattgcttgagttcaggagtttgcgattagcctgggcaacatgagaaaacagcatctctagcaaaaatacaaaaattagctgggtgtggtggctcatgcct-gtagtcccaactacttggggacatgagactggaagatcacttgagcccagaaggcataggttgcagtgagaccagatggcgccactacactacagcgtgg-tgacagaaggagaccctgtctctaaataa----agaaaaaaag----tatacaattcactggtttttagaatattcacagagctg-gcatccaccaccatagtctctcttagaagtgattacccacttatgagttagccacttacgagtgagaaaccctcacctcttagccactacctcctacttcccccatgttcctgtgtcttcataggcaaccactgatttattttctgtcattgtagttttgcctaatctggaccttttatagaaatagaactgtacaatgtgtgatcttttgtggtttgcttttttt i panTro4.chr2A N 0 C 0 s ponAbe2.chr2a 109894109 1489 - 113028656 GAATTCATGTAAAGAAAGACCGTGGGTGTTTGTACTGGATTTAGTATTCATCATTCGACTGCATGACTCACCCC-AGCGCCATAATTTTACTAACAAATTTTTCAGATACTACTCAGCTAGCGACTGATCCTAACCAGCAACCCATCCTCAACCATTCAGTGGTCTTTTGTTCTTCTCTGTTCCTCCTGAATGTTGATTACTCTCAGAAGGTGATAAAAACTTGCAtttctttttttttttttttcttcctagagacagggtcttgctttgtcacacaggctgcagtgcagtggcgtgatcatggctcactgcagcgtgaaacccccaggctcaaacattcctcccacctcagcctcccaagtagctgggactaacataacatttgcccctatgcccagctaacttctttattttttattgtacagacgggatcttgctgtgttgtccaggatggtgtcaagctcctggcctcaagtgatcattctgcctcagcttcccaaagtgcttggattatacataggtgggagccaccTGTGTTCAACGCCCAttttctttt----tctttctttttgagatggactctcgctctgtcacggaggctggagtgcagtggcatgatctcagctgactgcaacctccacctccctggttcaagctattcccctttctcagccttccgactagctggcattacaggcacatgccaccacactcagctaatgtttttgtatttttagtagggacggggtttcagtgtgttggccagactggtctcgaactcctgaaatcaggcaa-tctgcctgccttggcttccaaaagttgctgatattacaggcgtgagccaccacgcctggccC-----TTTTTAAAAtaataatgttattgaaatatgattaacatatcatgcaattcatttatcaaagtatgcaattcaggccaggcgcagtggctaattcctataatgctaagattttgggcggctgaggcaggtggattgcttgagttcaggagtttgcaattagcctgggcaacatgggaaaacagcatctctagcaaaaatacaaaaattagctgggtatggtggctcatgcctggtagtcccaactactcggggacatgagactggaagatcacttgagcccagaaggcataggttgcagtgagaccagatggcgccactacactacaacgtgggtgacagaaggagaccctgtctctaaataa----ataaaaaaagaaagtatacaattca-tggtttttagaatattcacagagctgtgcatccatcaccacag----tcttagaaatgattacccacttacgagttagccacttatgagtgagaaaccctcacctcttagccactacctcctacttttcccatgttcctgtgtcttcataggcaaccactgatttattttctgtcattgtagttttgcctaatctggaccttttatagaaatagaactgtacaatgtgtgatcttttgtggtttgctttttct i ponAbe2.chr2a N 0 C 0 a score=-1936.000000 s hg38.chrUn_GL000218v1 1484 2 + 161147 tt- s panTro4.chr2A 18524119 1 - 113622374 t-- i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109895598 1 - 113028656 t-- i ponAbe2.chr2a C 0 C 0 s nasLar1.chr9 42559833 2 + 124503471 -tc i nasLar1.chr9 N 0 N 0 a score=252506.000000 s hg38.chrUn_GL000218v1 1486 1077 + 161147 ctcttagcagaatgttttcaaatttctttcatgttatagtgtgtatcaggatttctttccttttatagctgagtaatagtttatgtttatcctttcattagttgatggacatttgtgttgtttttgcgtattcaccatcatgagtcaggctgctatgaacactcgtatgtaagttttagtgggaacatatatttttatttctcttggatttacactcaggagtgaaattgttgcattatgtgattattatacatttagtctttgagaaactgccacgttgtttttcaaagtggttacactggtcaggcacagtggctcacacctttaatctcaggtatttgagacgctgagtctggaggattttcttagcttgggagttcaggacaagcctgggaaacatagggaaacaatgtcttgattttttaaaaaaatcaaatgccaagaaaacacccaaattgattacaccattttatgttcccaccagtaatgtatgtgaattccaattattcca-atcgtcaccaactttttttttttttttgagacaaaatcttgctctgttgcccaggctggagtgcagtgacatgaacatggccagtgcagctgtgaccttccagtcacaagtgatcctctcacctcagcctcctaaatagctgggacttacagatgcatgctatcatgtgcagctgatttttacagtttttggtagaaatggggttctgtcatgtagcccaggtttgtgtcaaacccctgagctcaagtgatctgcctgcttcagcttccggaagtgctgagattacagttgtgtgccaccacacccgacTGGTGTAACCACTTTGGAAAGCAGCCACTGAGCTCGGCCTTCAACAG--TATACCAATATTTGTTAATATCGTTTTATTTTTTACAATTTTTCCATTTTTAAAAACTTATTCTTTTACCTGTATTATTGATTATAATAAACAACGAATAATTTTGTAGTAGAGTTGAGTCCCCCCAAAAAGTATTTATTGTTTAACTGAAGTAGTTTTTTTTTTTTTAACCTGGATATATATTTTTTCATTTTCACTTTATTTTTTGTG s panTro4.chr2A 18524120 1062 - 113622374 ctcttagcacagtgttttcaaatttcttccaggtta--gtgtgtatcagtatttctttccttttatagctgagtaatagtttatgtttatccattcatcagttgatggacatttgtgttgtttctgtgtatttgccgtcatgagtcaggctgctatgaacactcatatgtaagttttagtgtgaaaatatatttttatttctcttggatttacacccaggagtgaaattgttgaattatgtgattactatacatttagcctttgagaaactgccacgttgtttttcgaagtggttacaccactcaggcacagtagctcacacctttaatctcaggtattcgggaagctgagtttggaggattgtcttagcccaggagttcaggaccagcctgggcaacatagagagacAATATCTTGATTTTT-AAAAAAGTTAAATGCCAAGAAAACACcctaattgatgacaccattttatgttcccaccagtaatgtatgttagttccaattattccacattgttaccaactttttttttttg---gagacaaaatcttgctctgttgcccaggctgtagtgcagtggcatgaacacggccagtgcagctgtgaccttccaggcacaagtgatcctctcacctcagcctcctaagtaactgggacttacaggtgcatgctatcatgtgtggctgatttttacagtttttggtagagatggggttttgccatatagcccaggtttgtgtcaaactcc-gagctcaagtgatctgcctgcttcagcctccggaagtgctgagattacaggtgtgtgccaccaaacccgactggtgtaaccactTTGGAAAACAGCCATTGAGCCTGGCCTTCACCAG--TATACCaatatttgttaatatc--tttattttttactatattttcatttttaaatacat----tttaagctgtattattaattataataaaCAACAAATAATTTTGTAGTAGAGTTGAGTAGCCCCCAAAAGTATTTGTTGTTTAACTGAAATAGTTTTTTTTTA---AACCTGGATGTATATTTTTTCATATTCACTTTATTTTTAGTG i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109895599 1066 - 113028656 ctcttagcacaatgttttcaaatttctttcagattatagtgtgtatcaggatttctttccttttatagctgagtaatagtt--tgtttatccattcatcagttgatggacagttgtgttgtttctgtgtattcgctgtcatgagtcagactgttaggagcactcatatgtaagtttcagtgtgaaaaaatatttttatttctcttggatttacacccaggagtgaaattgttgcattatgtgattactatacatttagcctttgagaaactgccacgttgtttttcaaagtgattacaccagtcaggcacagtagctcacacctttaatctcaggtattcgggaggctgagtttggaggattgtcttagctcaggagttcaggaccagcctgggcaacatagggagacAATATCTTGATTTTT-GAAAAAGTCAAATGCCAAGAAAACACAcaaattgattacaccattttatgttcccaccagtaatgtatgtgagttccaattattccacattgttaccaaCttttttttttttttggagacaaaatcttgctctgttacccaggctgtagtgcagtagcatgaacatggccagtgcagctgtgaccttccaagcactagtgatcctctcacctcagcctcctaaataactgggacttacaggtgcatgctatcatgtacggctgatttttacagtttttggtagagatggggttttgccatgtagcccaggtttgtgtcaaactcctgagctcaactgatctgcctgcttcagcctctggaagtgctgagattacaggtgtgtgccaccaaacccgactGGTGTAACCACTTTGGAAAACAGCCACTGAGCCTGGCCTTCACCAGTATATACCaatatttgttaatatctttttattttttactatattttcatttttaaaaacat-tatttttaCCTGTATTATCAATTATAATAAACAACAAATAATTTTGTAGTAGAGTTGAGTCCCCCCAAAAAGTATTTGTTGTTTAACTGAGATAGTTTTTTCTTT--AAACCTGGATGTATATTTTTT-ATGTTCACtttatt------- i ponAbe2.chr2a C 0 C 0 a score=-1014.000000 s hg38.chrUn_GL000218v1 2563 2 + 161147 --TT s panTro4.chr2A 18525182 2 - 113622374 --tt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896665 2 - 113028656 --tt i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 4230 2 + 7622 AA-- i rhiRox1.JABR01073378v1 N 0 I 25 a score=5733.000000 s hg38.chrUn_GL000218v1 2565 21 + 161147 TATTTTTAAAAATTATTTATA s panTro4.chr2A 18525184 21 - 113622374 tatttttaaaaattatttata i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896667 21 - 113028656 tatttttaaaaattatttata i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 4232 25 + 7622 I a score=546.000000 s hg38.chrUn_GL000218v1 2586 1 + 161147 T s panTro4.chr2A 18525205 1 - 113622374 t i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896688 1 - 113028656 t i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 4257 1 + 7622 T i rhiRox1.JABR01073378v1 I 25 I 110 a score=25591.000000 s hg38.chrUn_GL000218v1 2587 106 + 161147 GTAtttttattttaataggtgtttgagaaacaggtggtgtttggttccatgaataagttcttcagtgttgatttctgaaa---tGTAGTACCCCTCATTACTCATTAAA s panTro4.chr2A 18525206 106 - 113622374 gtatttttacttcaataggtgtttgagaaacaggtggtgtttgggtccatgaataagttcttcagtgttgatttctgaaa---tgtagtgctcctcattactcattaaa i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896689 109 - 113028656 atatttttactttaataggtatttgagaaacaggtggtgtttggtttcatgaacaagttcttcagtgttgatttctgaaatgttgtagtacccgtcattcctcattaaa i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 4258 110 + 7622 I a score=180.000000 s hg38.chrUn_GL000218v1 2693 1 + 161147 T s panTro4.chr2A 18525312 1 - 113622374 t i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896798 1 - 113028656 t i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 4368 1 + 7622 C i rhiRox1.JABR01073378v1 I 110 I 332 a score=73323.000000 s hg38.chrUn_GL000218v1 2694 338 + 161147 TATATATTAAGTCATTATAAAATCATTAATAAACCAAGGACTTTAGTAAAATGGGAATTTTATTTTAACTTGCAACCTGGGATGTAACTGTCAAAAAAATTAGAGAAATTACCACATTAAGGTTTTAAAATCTTGAACTGAAAAATGAAAACCTTGGTGCACCTAAGAACCACCAGCCCACT-GGTCAAGGTGAGCAAAACTAAATGAA----AAAATAAAACCAAGAAAACCAAGCTCAGGATTATTAGGTATTCTGTAATGCTATTTTATCTTTGGACTCACAGAAAATAGttattattattattattattattattattattattattttgatatggagc s panTro4.chr2A 18525313 308 - 113622374 tatatattaagtcattataaaatcattaataaaCAAAGGACTTTAGTAAAATGGGAATTTTATTTTAATTTGCAACCTGGGACGTAACTGTCAAAAAAATTAGAGAAATTACCACATTAAGATTTTAAAATCTTGAACAGAGAAATGAAAACCTTGGTGCACCTAAGAACCACCAGCCCACCAGGTCAAGGTGAACAAAACTAAAC-------AAAATAAAACCAAGAAAACCAAACTCAGGATTATTAGGTATTCTGCAATGCTATTTTATCTTGGGACTTGCAGAAAATAGTTATTATTAtt---------------------------ttgata-ggagt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109896799 315 - 113028656 tatatattaagtcattataaaatcattaataaaCCAAGGATTTTAGTAAAATGGGAATTTTATTTTAATTTGAAACCTGGGATGTAACTGTCAAAAAATTTAGAGAAATTACCCCATTAAGATTTTAAAATCTTGAACAGAAAAATGAAAACCTTGGTGCACCTAAGAACCACCAGCCCACC-GGTCAAGGTGAACAAAACtaaataaaaaataaaataaaaCCAATAAAACCAAACTCAGGATTATTAGATATTCTGCAATGCTATTTTATCTTGAGACTTGCAGAAAAGAGTTATTATTGtt---------------------------ttgatatggagt i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 4369 332 + 7622 I a score=1899.000000 s hg38.chrUn_GL000218v1 3032 4 + 161147 ctca s panTro4.chr2A 18525621 4 - 113622374 ttca i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897114 4 - 113028656 ctca i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 4701 4 + 7622 ctca i rhiRox1.JABR01073378v1 I 332 I 260 a score=67998.000000 s hg38.chrUn_GL000218v1 3036 267 + 161147 ctctgtcacccaggctggagtgcagtggcacaatcttggctcactgcaacctctgcctcttgggttcaagtgattctcctgcctcagccttcagagtagttgggattacacgcaggttccaccatgcctggctaactt-gtatttttggtagagacagggtttcaccatcttggccaggctggtctgaaactcctgatctcaagcaatctgcctacctcagcctcccaaagtgctggaattacaggcgtgagccactgtgctcagcTG s panTro4.chr2A 18525625 267 - 113622374 ctctgtcacccaggctagagtgcagtggtgcattcgtggctcacggtaacctctgcctcctgggttcaagtgattctcctgcctcagccttcacagtagttgggattacaggcaagctccaccatgcctggctaacttagtatttttggtagagacagggtttcaccatgttggccaggctggtctgaaactcctgatctcaggcagtctgcctatctcagcctcccaa-gtgctggaatcacagacatgagccactgtgctcagcTG i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897118 267 - 113028656 ctctgtcacccaggctggagtgcagtggtgcattcgtggctcacggcaacctctgcctcctgggttcaagtgattctcctgcctcagccttcacagtaattgggattacaggcaggctccaccatgcctggctaacttagtatttttggtagagacagggtttcaccatgttggccaggctggtctgaaactcctgacctcaagcaatctgcctacctcaccctcccaa-gtgctggaattacaggcatgagccactgtgctcagctG i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 4705 260 + 7622 I a score=3276.000000 s hg38.chrUn_GL000218v1 3303 6 + 161147 AAAATA s panTro4.chr2A 18525892 6 - 113622374 AAAATA i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897385 6 - 113028656 AAAATA i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 4965 6 + 7622 aaaata i rhiRox1.JABR01073378v1 I 260 I 42 a score=11759.000000 s hg38.chrUn_GL000218v1 3309 48 + 161147 GTTAATTTTATGTATATTCCAAGTCAGAATACATCCTATTTTTGAATA s panTro4.chr2A 18525898 48 - 113622374 GTAAATTTTATGTATATTCCAAGTCAGAATACATTCTGTTTTTTAATA i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897391 48 - 113028656 GTTAATTTTATGTATATTCCAAGTCAGAATACATTTTATTTTTTAATA i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 4971 42 + 7622 I a score=93241.000000 s hg38.chrUn_GL000218v1 3357 223 + 161147 TTTGATGACTTTAGGATACTATATTAACTCTTAATTGAATTAATACAAGTTTAGGTGTAAAGATGATGTTTATGTTGACAAAAA-TTATTAATGTTTTACATATATGAAAGTAACAATATCATATATTTTTCATACTTGTAGAATACTTTGAA--ATCTATTATTAGCTAATATTTTATATTCATTTTGGGTTTTCACATTATT-GTTAGATCCAGAGAAAAGTAAC s panTro4.chr2A 18525946 218 - 113622374 TTTGATGACTTTAGGATACTAAATTTACTCTTAATTGAATTAATACAAGTTTAGGTGTAAAGTTGATGTTTATGTTGACTAAAA---ATTAATGTTTTACGTATATGAAAGTAATAACATCATATACTTTTTGTACTTTTAGAATACTTTGAA--ATCTATTA---GCTAATATTTTATATTCATTTTGGGTTTTCACATTAAT-GTTAGATCCAGAGAAAACTAAT i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897439 220 - 113028656 TTTGATGACTTTAGGATACTATATTAACTCTTAATTGAATTAATACAAGTTTAGGTGTAAAGGTAATGTTTAAGTTGACTAAAAATTACTAATGTTTTACATATATGAAAGTAATAATGTAATA-ACTTTTTGTACTCGTAGAATACTTTGAA--ATCTATTA---GCTAATATTTTATATTCATTTTGGGTTTTCACATTATT-GTTAGATCCAGAGAAAACTAAT i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 5013 222 + 7622 TTCGATTACTTTAGGATACTATATTAACTCTTAATTGAACTAATAGAAGTTTAGATGTAAGGATCATGTTTATGTTGACTAAAAATTATTAATGTTTTACATACATGAAAATAAAAATGACAT--AGTTTTTATACTTGTAGAATACTTTGAAATATATATTA---GTTAATATTTTATATTCATTTTGGGTTTTCACATTGTTAGAGAGATCCACAGAAAACTAAC i rhiRox1.JABR01073378v1 I 42 I 673 a score=91318.000000 s hg38.chrUn_GL000218v1 3580 363 + 161147 ATTTTGTGAATACTCAAATCATAAACATTTTGCTGGATTCATTCATAGATACTTTATTTAAAAAGTGCACTAATTGAAGTTTTACACCATTTTATGATTCATCAAACACAGCAACTGAATACTGTCATATAGCAACATTACAGATGTTAGTCTAACATAAAACTCATAATACATTTTAAAAAGGGTAAAAGGAAGGAAAGGAAAAAGGATACAAGGCTGTAGAAAGATTTTAAAAACAAACGTCATATGTCTGAACCTTTGCCTGGAGTTTCATATTTTGTGAAAAGCAGTTTGTAAGTAGAGGATTCGTAAGTGCACCTGGTACATTGCAGTGGCACAGACACAGCAGATAGTCAATAAAAT s panTro4.chr2A 18526164 363 - 113622374 ACTTTGTGAATACTCAAATCATAAGCATTTTGCTGGAAACATTCATAGATACTTTATTTAAAAAGTACACTAATTGAAGTTTTACACCATTTTATGATTCATCAAACACAGCAACTGAATCCTGGCGTATAGCAACATTACAGATGTTAGTCTAAGATAAAACCCATAGCACATTTTAAAAAGGGTAAAAGGAAGGAAAGGAAAAAGGATACAAGGCTGTATACAGATTTTAAAAACAAATGTCATATGTCTGAACCTTTGCCTGGAGTTTCATATTTTGTGAAAAGCAATTTGTAAGTAGAGGACTCATAAGTGCACCTAGTACACTGCAATGGCACAGACGTGGCAGATACTCAATAAAAT i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109897659 362 - 113028656 ATTTTGTGAATACTCAAGTCATAAGCATTTTGCT-GATGCATTCGTAGATATTTTATTTAAAAAGTACACTAATTGAAGTTTTACACCATTTTATGATTCATCAAACACAGCAACTAAATACTGGCATATAGCAACATTACAGATGTTAGTCTAAGATAAAACTCATAGCACATTTTAAAAAGGGTAAAAGGAAGGAAAGGAAAAGGGATACAAGGCTGTATAAAGATTTTAAAAACAAACATCATGTGTCTGAACCTTTGCCTGGAGTTTCATATTTTGTGAAAAGCAGTTTGTAAGTAGAGGACTCATAAGTGCACCTAGTACACTGCAATGGCACAGACCTGGCAGATACTCAATAAAAT i ponAbe2.chr2a C 0 C 0 e rhiRox1.JABR01073378v1 5235 673 + 7622 I a score=1146.000000 s hg38.chrUn_GL000218v1 3943 2 + 161147 GA s panTro4.chr2A 18526527 2 - 113622374 GA i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109898021 2 - 113028656 GA i ponAbe2.chr2a C 0 C 0 s rhiRox1.JABR01073378v1 5908 2 + 7622 GA i rhiRox1.JABR01073378v1 I 673 N 0 a score=32038.000000 s hg38.chrUn_GL000218v1 3945 152 + 161147 TCTTTAACTTCTGATCTAGGTTATTTTTGTTGTTGTTCATGTATTAACCT-GTGAAACTTAGCCAATAGATGGAGTGGCATTGACCTGT--------------------------------------ACAACTTCCAAGATCCCATCCAAACTTAGTGTGCTCTGAAGTTCTCCATAATTTATTGTCTGTT s panTro4.chr2A 18526529 187 - 113622374 TCTTTAACTTCTGATCTAGGTTATTTTT-TTGTTGTTCATGTATTAACCTAGTGAAACTCAGCCAATAGATGGAGTGGCATTGACCTGTAAAACTTCCAAGATCCCGTGATCAATTAAAAAAAAAAAAAAACTTCCAAGATCCCATCCAACCTTAGTGTCCTCTGAAGTTCTCCATAAT---TTGTCTGCT i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109898023 151 - 113028656 TCTTTAACTTCTGATCTAGGTTATTTTTGTTGTTGTTCACTTCTTAACCTAGTGAAACT--GCCGATAGATGGAGTGGCATTGACCTGT--------------------------------------AAAACTTCCAAGATCCCATCCAACCTTAGCGTCCTCTGAAGTTCTCCATAATTTATTGTCTGTT i ponAbe2.chr2a C 0 I 15 a score=2195.000000 s hg38.chrUn_GL000218v1 4097 29 + 161147 CCAACCAACATTCAGCATAAGCTACAGCT s panTro4.chr2A 18526716 29 - 113622374 GCCACCAACATTTAGCATAAGCTACAGCT i panTro4.chr2A C 0 C 0 e ponAbe2.chr2a 109898174 15 - 113028656 I a score=933.000000 s hg38.chrUn_GL000218v1 4126 11 + 161147 TATATTGTTAA s panTro4.chr2A 18526745 8 - 113622374 TATATTGT--- i panTro4.chr2A C 0 C 0 s otoGar3.GL873525 38793230 11 + 46294980 tatactgtgga i otoGar3.GL873525 N 0 I 226 e ponAbe2.chr2a 109898174 15 - 113028656 I a score=14862.000000 s hg38.chrUn_GL000218v1 4137 58 + 161147 TAATCCTTCTATGTTTATGTGCTGATTTGCAAATAAATGGGCCTATATAGTCTTTATC s panTro4.chr2A 18526753 58 - 113622374 TAATCCTACTATGTTTATGTGCTGATTTGCAAATAAATGGGCTTATATAGTCTTCATC i panTro4.chr2A C 0 I 6913 s ponAbe2.chr2a 109898189 58 - 113028656 TAATCCTACTATGTTTATATGCTGATTTGTAAATAAATGGGCTTATATAGTCTTCATC i ponAbe2.chr2a I 15 I 7060 e otoGar3.GL873525 38793241 226 + 46294980 I a score=35156.000000 s hg38.chrUn_GL000218v1 4195 152 + 161147 tagtgttggattggggtcaaaagttttat--gaaatcattgtttttagtatacgtacagatggataattgtataaataagtacagatgtgtataaatgtgtgagtatacatacatacattttctagctcttctaacaaaagggcctagaaacaa s panTro4.chr2A 18533724 149 - 113622374 tagtgttggattggaatcaaaagtattatatgaagtcattgtttttagtatatgtacagacggataattgtatacata----tagatgtgtataaacgtgtgagtatacatacatgcattttctagctcctctaacaaaagggcctagaaaca- i panTro4.chr2A I 6913 C 0 s ponAbe2.chr2a 109905307 149 - 113028656 tagtgttggattggaatcaaaagtattatatgaagtcattgtttttagtatatttacagatggataattgtataaata----tagatgtgtataaatgtgtgagtatacatacatacattttctagctcctctaacaaaagggcctagaaaca- i ponAbe2.chr2a I 7060 C 0 e otoGar3.GL873525 38793241 226 + 46294980 I a score=-1014.000000 s hg38.chrUn_GL000218v1 4347 3 + 161147 cat-- s panTro4.chr2A 18533873 1 - 113622374 --t-- i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109905456 1 - 113028656 --t-- i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38793467 3 + 46294980 --taa i otoGar3.GL873525 I 226 I 128 a score=35737.000000 s hg38.chrUn_GL000218v1 4350 137 + 161147 catcccagtaacaatgagaacaccattctccaattgaaggaaccaaggctccttggggacatatttgatatcaggattgggcagggaaaatacaagattagtttgaaatattttgtcatgttagaaagtaaggaaat s panTro4.chr2A 18533874 137 - 113622374 catcccagtaacaatgagaaaaccattctccaattaaaggaaccgaggctccttgggaacatatttgacatcaggattaggcagggaaaatagaagattagtttgaaatattttgtcatgctagaaagtaaggaaat i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109905457 137 - 113028656 catcccagtaacaatgagaacaccattctccaattaaaggaaccaaggctccttggggacatatttgacatcaggattgggcagggaaaatacaagattagtttgcagtattttgtcatgctagaaagtaaggaaat i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793470 128 + 46294980 I a score=391.000000 s hg38.chrUn_GL000218v1 4487 4 + 161147 gctc s otoGar3.GL873525 38793598 4 + 46294980 gctc i otoGar3.GL873525 I 128 I 169 e ponAbe2.chr2a 109905594 0 - 113028656 C e panTro4.chr2A 18534011 0 - 113622374 C a score=69424.000000 s hg38.chrUn_GL000218v1 4491 281 + 161147 acaaaatggggaaaatgtgaaaaggaaacagaatccactttgaatcaacttccatggccaaatttgagaaaattggggcaataaaataaataacaataataatatattacaatctacagaagaaaattttcaattaatccatgccgggtgcggtggctcatgcctgtattcccagcactttgggaggccgaggcgggcagatcacttgaggtcaggagttcaagaccagcctgaccaatgtggtgaatccctgcctctactaaaaatacaaaaattagccg s panTro4.chr2A 18534011 281 - 113622374 acaaaacggggaaaatgtgaaaaggaaacagaatccactttgaataaagttacatagccaaatttgagaaaattggggcaataaaataaataacaatagtaatatattacaatctacagaagaaaattttcagttaatccaggccgggtgcagtggttcatgcctgtaatcccagccctttgggaggccaaggtgggcagatcacttgaggtcaggagttcgagaccagcctgaccagcgtggtgaaaccccgcttgtactaaaaatacaaaagttagctg i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109905594 279 - 113028656 acaaaacggggaaaa--tgaaaaggaaacagaatccactttgaataaagttacacagccaaatttgagaaaattggggcgataaaataaataacaatagtaatctgttacaatctatggaagaaaattttcagttaatccaggccgggtgcagtagctcatgcctgtaatcccagccctttgggaggccgaggcgggcagatcacttgaggtcaggagttcgagaccagcctgaccagtgtggtgaaaccccgcctctactaaaaatacaaaaattagccg i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793602 169 + 46294980 I a score=414.000000 s hg38.chrUn_GL000218v1 4772 2 + 161147 gg s panTro4.chr2A 18534292 2 - 113622374 gg i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109905873 2 - 113028656 gg i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38793771 2 + 46294980 aa i otoGar3.GL873525 I 169 I 39 a score=44700.000000 s hg38.chrUn_GL000218v1 4774 199 + 161147 catggtggcacatgactgtagtcccagctactcgggaggctgaggcaggagaatggcttgaatcctggaaggtggaagtgcagtgagcggaaattgcaccattgcacaccagcctggatgacaaagcaagactccatctcaaaaa--------aaagtaat-aatccatattgacataaataata-----------aaccaaaggttgagaatgggcag s panTro4.chr2A 18534294 217 - 113622374 catggtggcacatgcctgtagtcccagctacttgggaggctgaggcaggagaatggcttgaatcccggaaggtggaagtgcagtgagctgagatcgcaccttggcactccagcctggatgacaaagcaagactgcatctcaaaaat--aaaaaaaattaatgaatccatattgacataaataatatattaaatataaaccaaagggggagaatgggcag i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109905875 215 - 113028656 catggtggcacatgcctgtagtcctagctactcgggaggctgaggcaggagaatcgcttgaatgctgggaggcggaagtgcagtgagccgagatcgcaccgtggcactccagcctggacgacaaagcaagactccatctcaaaaataaaaaaaaaataaatgaatccatattgac----ataatatattaaatataaaccaaagggggagaatggacag i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793773 39 + 46294980 I a score=546.000000 s hg38.chrUn_GL000218v1 4973 1 + 161147 t s panTro4.chr2A 18534511 1 - 113622374 t i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906090 1 - 113028656 t i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38793812 1 + 46294980 t i otoGar3.GL873525 I 39 I 8 a score=2184.000000 s hg38.chrUn_GL000218v1 4974 8 + 161147 attttatt s panTro4.chr2A 18534512 8 - 113622374 attttatt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906091 8 - 113028656 attttatt i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793813 8 + 46294980 I a score=2001.000000 s hg38.chrUn_GL000218v1 4982 16 + 161147 acagtaagatttcatt s panTro4.chr2A 18534520 16 - 113622374 acagtaagattttatt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906099 16 - 113028656 aaagtaagattttatt i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38793821 4 + 46294980 -------gatg----- i otoGar3.GL873525 I 8 I 57 a score=12799.000000 s hg38.chrUn_GL000218v1 4998 54 + 161147 aaatgtaggagacataaaatataagaatcatcactttgcaaatatcatagtaat s panTro4.chr2A 18534536 54 - 113622374 aaatgtaggagacataaaatacaagagtcatcattttgcaaatatcatagtaat i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906115 51 - 113028656 aaatgtaggagacataaaatacaagaatcatcattttgcaaat---atagtaat i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793825 57 + 46294980 I a score=273.000000 s hg38.chrUn_GL000218v1 5052 3 + 161147 aat s otoGar3.GL873525 38793882 3 + 46294980 aat i otoGar3.GL873525 I 57 I 557 e ponAbe2.chr2a 109906166 0 - 113028656 C e panTro4.chr2A 18534590 0 - 113622374 C a score=145838.000000 s hg38.chrUn_GL000218v1 5055 575 + 161147 tgttgcaagaaagaaccttggagggatgctaagattagtggtgaatatatgttgggaaagaacatttttgcataatatgaaagtatcttcccacaagataattatagaatagtaacttcaaagtggagatgtcaacttagccaagtgatcaaagttaacattactaataataaaataaatgaacttcatgtaacttcttatatgatgcactgagtaggacaaaacatcaattctatggtattcttagacaaaatgtataactttagtcctaatcgtgagaaaatatcagactaactgaaattgaggagggacattttacaaaataactgccagtattcttcaaaagcattttagaaagactgaggaattcgccagagacatggagacatgtcaactaagtgcaatggagaaaatgcattgtatcatgaaccagagatggacaacagtaggatatatacaataacaccccaacatttgaacattaaacaaaatgcttcagaaaaacccattggtcaagaaaagtttcacacacaaaaa--aaatagtttaaactgaaagaaaa-tttttaaaaacttaa s panTro4.chr2A 18534590 578 - 113622374 tgtagcaagaaagaaccttggagggatgctaagattagtggtgaatatatgttgggaaagaacatatttgcataatatgaaagtatcttcccacaggataattacagaatagtaacttcaaagtggagatgctaccttagccaagtgatcaaagttaacattactaataataagataaatgaacttcatgtaacttcttatatgatgcactgagtaggacaaaacatgagttctatggtattcttagacaaaatgtataactttagtcctaatcatgagaaaacatcagacaaattgaaatcgaggaagggcgttctacagaataactgccagtattcttcaaaagcattttagaaagattgaggaattctccagagacatggagacatgtcaactaagtgcaatggagaacatggattgtttcatgaaccagagatggacaacactagggtgtataaaataataccccaacatttgaacattaaacaaaatacttcagaaaaactcatgggccaagaaaagtttcacacacacacacaaaataggttaaactgaaagaaaaatttttaaaaacttaa i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906166 577 - 113028656 tgttgcaagaaagaaccttggagggatgctaagattagtggtgaatatatgttgggaaagaacatatttgcataatatgaaagtgtcttcccacaagataattacagaatagtaacttcaaagtggagatgccaccttagccaagtgatcaaagttaacattactaatagtaagataaatgaacttcatgtaacttcttatatgatgcactgagtaggacaaaacatcaattctgtggtattcttagacaaaatgtataactttagtcctaatcatgagaaaacatcagacaaattgaaatagaggaggggcgttatacaaaataactgccagtattcttcaaaagcattttagaaagactgaggaattctccagagacatggagacatgtcaactaagtgcaatggagaacatggattgtttcatgaaccagaGATGGGCAACACTAGGATATATAAAATAACAccccaacatttgaacattaaacaaaatacttcagaaaaacccatgggccaagaaaagtttcacacacacacac-aaatagcgtaaactgaaagaaaagtttttaaaaacttaa i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38793885 557 + 46294980 I a score=273.000000 s hg38.chrUn_GL000218v1 5630 3 + 161147 taa s otoGar3.GL873525 38794442 3 + 46294980 taa i otoGar3.GL873525 I 557 I 40 e ponAbe2.chr2a 109906743 0 - 113028656 C e panTro4.chr2A 18535168 0 - 113622374 C a score=10310.000000 s hg38.chrUn_GL000218v1 5633 40 + 161147 aatgtgggatgcagataaatcatttcttaaaggtacattt s panTro4.chr2A 18535168 40 - 113622374 aacatgggatgcagataaatcatttcttaaaggtaaattt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906743 40 - 113028656 aacgtgggatgcagataaatcatttcttaaaggtaaattt i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38794445 40 + 46294980 I a score=-1936.000000 s hg38.chrUn_GL000218v1 5673 2 + 161147 at- s panTro4.chr2A 18535208 1 - 113622374 a-- i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906783 1 - 113028656 a-- i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38794485 2 + 46294980 -tt i otoGar3.GL873525 I 40 I 223 a score=56573.000000 s hg38.chrUn_GL000218v1 5675 282 + 161147 agatgtaatat----attgaaaataaaaggcttcaatcaatgacctttaggttcttttttaagaggctaaaaaaatga---gcaaagtatatccaaattaagaagaaggaagatgataaagataaaaatgtaaaccaacaacatagcaaataacaaaaggtggagctaattaatatacccacaaattggttctttgaaaaaaatttttttaataaacaatggctagcaagatttatctt-gaaaaaaattagagaagctacataatgtagataatgagaattaaatggag s panTro4.chr2A 18535209 266 - 113622374 -gatgtaatat------tgaaaataaaaggcttaaatcaatgacctctaggttcttctctaaaaagctaaaaaaatgaagagcaaagtatatccaaattaagaaggag-------ataaagataaaaa-----agcaacaacatagcaaataaccgaaggtggagctaattaatacacccacaaattggttctttgataaaaatttttt-aataaacaatggctagcaagatttatcacagaaaaaaattagagaagctacaaaatttagataacgggaatta----gag i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109906784 276 - 113028656 -gatgtaatacatatattgaaaataaaaggcttaaatcaatgacctttaggttcttttttgagaagctaaaaaaa-gaagagcaaagtatatccaaattaagaag----------ataaagataaaaatgtaaaccaacaacatagcaaataaccaaaggtggagctaattaatatactcacaaattggttctttgaaaaaaatttttt-aataaacaatggctagcaagatttatcacggaaaaaaattagaaatgctacaaaatttagataacgggaattaaataga- i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38794487 223 + 46294980 I a score=-1189.000000 s hg38.chrUn_GL000218v1 5957 2 + 161147 ga- s panTro4.chr2A 18535475 2 - 113622374 tt- i panTro4.chr2A C 0 C 0 s otoGar3.GL873525 38794710 2 + 46294980 -aa i otoGar3.GL873525 I 223 I 106 e ponAbe2.chr2a 109907060 0 - 113028656 C a score=26937.000000 s hg38.chrUn_GL000218v1 5959 116 + 161147 tgtaactacagaacctacagacatcaatacaattatgaaaactttaggccaataca-tttgacaattaaaataactgggaaattatttgtaaaactaattctaaaaactgatgcaaa s panTro4.chr2A 18535477 113 - 113622374 tgtaattacagaacctatagacatcaatataattatgaaaactttaggccaatacaatttgacaaataacat----gggaaattatttgtaaagctaattcttaaaactgatgcaaa i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907060 112 - 113028656 tgtaattacagaacctacagacatcaatataattatgaaaactttaggccaataca-tttgacagataacat----gggaaattatttgtaaaactaattcttaaaactgatgcaaa i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38794712 106 + 46294980 I a score=180.000000 s hg38.chrUn_GL000218v1 6075 1 + 161147 a s panTro4.chr2A 18535590 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907172 1 - 113028656 a i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38794818 1 + 46294980 g i otoGar3.GL873525 I 106 I 54 a score=7603.000000 s hg38.chrUn_GL000218v1 6076 56 + 161147 tgaaatagaaaaagtaatagct-ctctatgtattgaagaa-tttttttaatttaaaaa s panTro4.chr2A 18535591 49 - 113622374 agaaa--gaaa---taatagcttctctatgtattgaagaa-ttttttaaatt---aaa i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907173 56 - 113028656 agaaa--gagaaagtaatagcttctctatgtattaaagaatttttttttatttaaaaa i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38794819 54 + 46294980 I a score=-796.000000 s hg38.chrUn_GL000218v1 6132 2 + 161147 ga- s panTro4.chr2A 18535640 2 - 113622374 aa- i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907229 2 - 113028656 ga- i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38794873 2 + 46294980 -ac i otoGar3.GL873525 I 54 I 374 a score=94306.000000 s hg38.chrUn_GL000218v1 6134 376 + 161147 tttctataa-----ttacaggctacatggtttcttaggtgaattctatcaaacatttaagaaagTAcagagagtcctcaacttacggtggtttgac-ttgtgctcttctgacttgataatggtgctttcatctgtgtacattaatgatgagcatcaatatgaccagtttttcactatcagtatagttttcaataaatttcatgagatactcaatattttaaaatgggccttgtggtagatgattttgcccaattgtaggataatgtaaatgttctgagcaagtttaaggtaggcgaggctaagtcatgatattcagtaggttaaatatattaaatgcattttagacttacaatattttcaatttaggatgagttcattaaga s panTro4.chr2A 18535642 378 - 113622374 tttctataag--aattccgggctgcatggtttcttaggtgaattctatcaaacatttaagaaagTAcagagagtcctcagcttacagtggtttgaccttgtgctcttttgacttgataatggtgctttcatgtgtgtacattaatgatgagcatcaatatgaccagtttttcactatcagaatagttttcaataaatttcatgagatactcaatattttaaaatgggccttgtggtagatgattttgcccaattgtaggctaataaaagtgttctgagcaagtttaaggtaggcgaggct--gtcatgatattcagtaggttaaatatattaaatgcgttttagacttaaaatattttcaatttaggatgagttcattaaga i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907231 381 - 113028656 tttctataaggtaattccaggctgcatagtttcttaggtgagttctatcaaacatttaagaaagTAcagagagccctcaacttgtagtggtttgac-ttgtgctcttttggcttgataatggtgctttcatctgtgtacattaatgatgagcatcaatatgaccagtttttcactctcagtatagttttcaataaatttcatgagatactcaatattttaaaatgggccttgtggtagatgattttgcccaattgtaggctaatgtaagtgttctgagcaagcttaaggtaggcgaggctaagtcgtgatattcagtaggttaaatatattaactgtgttttagacttacaatgttttcaatttaggatgagttcattaaga i ponAbe2.chr2a C 0 C 0 e otoGar3.GL873525 38794875 374 + 46294980 I a score=18411.000000 s hg38.chrUn_GL000218v1 6510 72 + 161147 cata-agaccattgtaagttgaggagtatctAtaatatcaaccttgaacggactctttttaagaaatagaatt s panTro4.chr2A 18536020 70 - 113622374 ca---agcccattgtaagttgaggagtatctataatgccaatcttgaatggactctttttaagaaatagaatt i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907612 72 - 113028656 cata-agcccattgtaagttgaggagtatctAtaatatcaatcttgaacggactcttgttaagaaatagaatt i ponAbe2.chr2a C 0 C 0 s otoGar3.GL873525 38795249 40 + 46294980 --tgtgacccctcataagttgaggaatatcCAT-------------------------------AATAGTATT i otoGar3.GL873525 I 374 N 0 a score=148458.000000 s hg38.chrUn_GL000218v1 6582 612 + 161147 taagggctgggcacagtggctcacacctgtaatcccagcactttgggaggccaagatgggcagatcacctggggtcaggagtttgagaccaacctggccagcatggagaaacccccgtctctactaaaagtacaaaattagcagggcatggtggcgcttgtctgtaatcccagctcctcggaagccagaggcaggagaatagcttgaatctgggaggcagaggttgcggagagccgaaattgtgccattgcactccagcctgg-caacaagagtgaatctccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaagaatctaaagggacaattcctatcttattttatgaacccagtattgccctgattccaaatcgagacaaaggcattatacaactttgatgtttattcctcataaacatagactcaaaagtccttaaaacttaataaccaattgaatgtagcagtacatagaatggataataaactg--aacaaattaaatttctagcaagattgcaaggttaatttattatttgaaagatcagtttaatCAATTTTATTCAACtggatggttacatctggcaaaactcagcaaactgtgcactttaaaatag s panTro4.chr2A 18536090 603 - 113622374 taagggccgggcacagtggctcacacctgtaatcccagcactttaggaggccgaggtgggcagatcacatggggtcaggagtttgagactagcctgaccagcgtggagaaacccccatctctactaaaagtacaaaattagctggacgtggtggcacatgcctgtaatcccagctactcgggaggcagaggcaggagaatagcttgaacctgggaggcagaggttgcagagagccgagattgcgccattgcactccagcctgggcaacaagagtgaatctctgtctcaaaaaaaaaaaaaaaaaaa------------ttaaagggacccttactgtcttattttatgaacccagtattgccctgattccaaatcgagacaaaggcattatacaactttgatatttattcctcgtaaacataaactcaaaagttcttaaaacataataaccaattgaatatagcagtacatagaatggataataaactgtgagcaaatgaagtttctagcaagattgcaaggttaatttattatttgaaagatcagtttaatcaattttattcaccTGGGAGGTtacatctggcaaaactcagcaaactgtgcactttaaaatag i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109907684 603 - 113028656 taagggctgggcacagtggctcacacctgtaatcccagcactttgggaggccgaggcgggcggatcacctggggtcaggagtttgagaccagcctgaccagcgtggagaaacctccgtctctactaaaagtacaaaattagccaggtgtggtggcatatgcctgtaatgccagctactcgggagacagaggcgggagaatagcttgaacctgggaggcagaggttgcagagagccgagattgtgccattgcactccagcctgggcaacaagagtgaatctctgtttaaaaaaaaaaaaaaaaaaga----------atttaaagggacccttcctatcttattttatgaacccagtattgccctgattccaaatcgagacaaaggcattatacaactttgatatttatccctcataaacatagactcaaaagtccttaaaacatagtaaccaattgaatgtagcagtacatagaatggataataaactgtgagcaaatgaaatttctaacaagattgcaaggttaatttattatttgaaagatcaGTTTAATCAGTTTTATTCacctgggcggttacagctggcaaaactcagcaaac--tgcactttaaaatgg i ponAbe2.chr2a C 0 C 0 a score=1353.000000 s hg38.chrUn_GL000218v1 7194 3 + 161147 gaa s panTro4.chr2A 18536693 3 - 113622374 gag i panTro4.chr2A C 0 C 0 s panPan1.JH650631 4929966 3 - 5173588 gag i panPan1.JH650631 N 0 N 0 s ponAbe2.chr2a 109908287 3 - 113028656 gag i ponAbe2.chr2a C 0 C 0 a score=95255.000000 s hg38.chrUn_GL000218v1 7197 392 + 161147 tatttattttatgtaaattatgtttgaatacaattgattttttaaaaaaAAACGTTTCCCAGAGTGATCAAAGTGGAGGGCAGGGAACAGTAAACATCAG-TGCTTATGTTATAGCTACTAGAAGCCTCCCAATTCCAACGACATGTTTTCAAGCAGGTCTGATCCTTCCCCTGGAGGATACCTCTGACCCAGGTGTGCTACAAATGCATTGCCCCTAGTTGCTTCTGTCACCTTAGTGATGGAAGTGACAAGAGGGTACTGGAGAAAGAAAAGGTGTACAGGGTTCCAAATGTACTTTCTCTTTCCAAAGGACATTTGTGAAGCCAGTGGAAAGCGAACAAACAAGCTGCTAAATAAGTCACAAGTGTCTTCTCGTACAGTTTTGTGATTAA s panTro4.chr2A 18536696 383 - 113622374 tatttattttatgtaaattacgtttcaatacaattgattttttaaaaaaA--CGTTTCCCCGAGTGATCAAAGTGGAGGGCAGGGAACAGTAAACATCAT-TGCTTATGTTACAGCTACTAGAAGCCTCCGAATTCCAACGACGTGCTTTCAAGCAGGTCTGATCCTTCCCCTGGCGGATACCTCTGACTCAGGTGTGCTACAAATGCATTGCCCCTAGTTGCTTCTATCACCTTAGTGATGGAAGTGAGAAGAGGGTACTGGAGAAAGAAAAGGTGTACAGGGTTCCAAATGTACTTTCTTTTTCCAAAGGACACTCGTGAAGCCAGTGGAAAG----CAAACAAGCTGCTAAATAAGTCACAAGCGTGTTCTCATACAGTTTTGTGAT--- i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109908290 386 - 113028656 tatttattttatgtaaattacatttcaatacaattgattttttaaaaaaA--CGTTTCCCAGAGTGCTCAAAGTGGAGGGCAGGGAACAGTAAACATCAGTTGCTTATGTTACAGCTACTAGAAGCCTCCGAATTCCAACAACGTACTTTCAAGCAGGTCTGATCCTTCCCCTGGAGGATACCTCTGACTCAGGTGTGCTACAAATGCATTGCCCCTAGTTGCTTCTATCACCTTAGTGATGGAAGTGAGAAGAGGGTACTGGAGAAAGAAAAGGTGTACAGAGTTCCAAATGTACTTTCTCTTTCCAAAGGGCAGTCGTGAAGCCAGTGGAAAG----CAAACAAGCTGCTAAAGAAGTCGCAAGCGTGTTCTCATACAG-TTTGCGGTTAA i ponAbe2.chr2a C 0 C 0 a score=285.000000 s hg38.chrUn_GL000218v1 7589 4 + 161147 CTAA s panTro4.chr2A 18537079 3 - 113622374 -TAA i panTro4.chr2A C 0 C 0 s gorGor3.chr2A 18834917 4 - 111351968 CTAA i gorGor3.chr2A N 0 I 9949 s ponAbe2.chr2a 109908676 3 - 113028656 CTA- i ponAbe2.chr2a C 0 C 0 a score=23902.000000 s hg38.chrUn_GL000218v1 7593 108 + 161147 ATAGGACATTCAACAGATAAAGTTTGTTTTACATAGTTACTCCTCTAATAGGATGAACTTGTGGATTGTGAGATAGGGCTGATATAACCTGTTTTCTCTCTGCCTC-TT s panTro4.chr2A 18537082 109 - 113622374 ATAGGACATTCAATCAATAAAATTTGTTTTACATAGTTCCTCCTCTGATAGGATGAACTTGTGGATTGTGAGACAGGGCTGATAGAACCTGTTTTCTCTCTGCCTCTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109908679 104 - 113028656 ---GAACATTGAGTCAGTAAAATTTGTTTCACATAGTTCCTCCTCTAATAGGATGAACTTGTGGATTGTGAGATAGGGCTGATATAACCTCTTTTCTCTCTGCCTC--T i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=-1535.000000 s hg38.chrUn_GL000218v1 7701 1 + 161147 -A s panTro4.chr2A 18537191 1 - 113622374 -T i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109908783 1 - 113028656 -T i ponAbe2.chr2a C 0 C 0 s tarSyr2.KE924843v1 206451 1 + 565755 g- i tarSyr2.KE924843v1 N 0 N 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=130440.000000 s hg38.chrUn_GL000218v1 7702 505 + 161147 TTTTCCCCCCAAGTTTTGTGTGCAATACATTAGGAAAAATATAATTGGGCTATAAAGCTACAAAAATGGCTTCCTGGCAGTTCCATGCTTGTTTCCATGTGGTGCCTATGTTTGGCACTGTGTTCTCATTTGCACTTTCCTACTTGATTAGTTAATGTAT---GGACAAGCCTGATCTCTACTGTGAATTTTTACCAAGGTATTCTAGTAGAAAAATGAGTATGTAATGGTGCTGTGGAATGCTAAAGTGTGCAAAACATTAAGAATCTAAAAATATGCTCATTTCCAAGTTTTGTCCCAGAGCAACTGTGCACTC----TATATCGCTACTGCTATTTAAAGTTATCCATTTGCATGTCTAAAAAATAGATTCATACTGATTGTCCCA-TTTGATCTCAAAAAACTCCTGAATGTGAGAGTCGTGATCAAGGGACGCTTCATGAAATGTTCCAAAGTTAAAGTGTGCAATGAAACCAGATTTATCATAGCTTTATTTAAAATAATTATTTCT s panTro4.chr2A 18537192 513 - 113622374 TTTTTCCCCCAAGTTTTGTGTGCAATACATTAGGAAAAATATAATTGGGCTACAGAGCTACAAAAATGGCTTCCTGACAGCCTCATACTTGTTTCCATGTGGTGCCTATGTTTGGCACTGTGTTCTCATTTGCATTTTCCTACTTGATTAGTTAATGTATGAAGGACAAGCCTGATCTCTACTGTGAATTTCTACCAAGGTATTTTAGTAGAAAAATAAGTATGTAATGGTGCTGTGGACTGCTAAAGTGTGTAAAACATTAAGAATCTAAAAATATGCTCATTTCCAAGTTTTGTCCCAGAGCAACTGTGCACGCTGATTAAATCACTACTGTTATTTGAAGTTATCCATTTGCATGTCTAAGAAATGGATTCATACTGATTGTCCCATTTTGATCTCAAAAAACTCCTGAATATGAGAGTCGTGATCAAGGAATGCTTCATGAAATGTTCCAAAGTTAAAGTGTGCAATGAAACTAGATTCATCATAGCCTCatttaaaataattatttct i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109908784 513 - 113028656 TTTTTCCCCCAAGGTTTGTGTGCAATACATTAGGAAAAATATAATTGGGCTATAAAGCTACAAAAATGGCTTCCTGGCAGCCTCATACTTGTTTCCATGTGGTGCCTATATTTGGTACTGTGTTCTCATTTGTATTTTCCTACTTGATTAGTTAATGTATGAAGGACAAGCCTGATCTCTACTGTGAATTTCTACCAAGGTATTTTAGTAGAAAAATAAGTATGTAATGGTGCTGTGGACTGCTAAAGTGTGTAAAACATTAAGAATCTAAAAATATGCTTATTTCCAAGTTTTGTCCCAGAGCAACTGTGCACTCTGATTAAATCACTACTGTTATTTGAAGTTACCCATTTGCATGTCTAAGAAATGGATTCATACTGATTGTCCCATTTTGATCTCAAAAAATTCCTGAATATGAGAGTCGTGATCAAGGGACGCTTCATGAAATGTTCCAAAGTTAAAATATGCAATGAAACTAGATTCATCATAGCCTCATTTAAAATAATTATTTCT i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=546.000000 s hg38.chrUn_GL000218v1 8207 1 + 161147 A s panTro4.chr2A 18537705 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109909297 1 - 113028656 A i ponAbe2.chr2a C 0 C 0 s nasLar1.chrUn_JMHX01036782v1 1334 1 - 1541 A i nasLar1.chrUn_JMHX01036782v1 N 0 N 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=37271.000000 s hg38.chrUn_GL000218v1 8208 167 + 161147 AAATTGTTATTGTTTAATTATAAACGGTATCCTTTCAGGATACTTGGAAGATCCATAGCAGTGTTTTTATTTTCACAGAACAAGCATAAATTATTTATGAAATAATAACTCAGATACAGAGATTACTTCCTATTGGCCTTACATATGAATATAAATAAATACATATT s panTro4.chr2A 18537706 165 - 113622374 aaattgttattgtttaattataaaCTGTATCCTTTCAGGATACTTGGAAGAGCCATACCAGTGTTTATATTTTTACAGAACAAAC--AAATTATCTATGAAATAATCACTCAGATATAGAGATTAGTTCCTGTTGGCCTTACATATGAATATAAATAAGTAAAAATT i panTro4.chr2A C 0 I 13 s ponAbe2.chr2a 109909298 165 - 113028656 AAATGGTTATTGTTTAATTATAAACTGTATCCTTTTGGGATACTTGGAAGATCCATAGCAGTGTTTATATTTTTGCAGAACAAACATAAGTTATCTATGAAATAATAACTCAGAT--AGAGATTACTTCCTATTGGCCTTACATGTGAATATAAATAAGTAAAACTT i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=1498.000000 s hg38.chrUn_GL000218v1 8375 21 + 161147 ATGAACATGCACATACTTATT s ponAbe2.chr2a 109909463 21 - 113028656 ATGAACATAAGCATACTTATT i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I e panTro4.chr2A 18537871 13 - 113622374 I a score=804391.000000 s hg38.chrUn_GL000218v1 8396 3218 + 161147 TTATAATTATGTAAATGTGTGTGTAATGTTATATATAAGTTCAATAAAGTCATGCTTATACATGGTTTCAATTCATGCTTCTAAAAACCACTCAATGTAGTcattatcataagttaataaataatctctgaaaatgtgcttctagtagttgcacaatatcccatcataaagattgtcatgctgtttttaagtcatacttttgggtatataagttatatctgatatttttctgctacatatatactattataaatctattagtagttga-ttttttgtgaacacatatgattgtttcctcaCAACAGTACAAGAGTTGGTTGTAACtttatttccttccaacatttattttaggttcag-cgggtacatgtgcaggtttattatatgggtaaaatgtgtgtcaatgggatttggtgtacagattacgtagtcatccaggtagtgagcgtagtatctaatagggagttttttgatcctcactctcccccccaccctccacccacagtagaccttgtgtctattgttcccttctttgtgtcc----atgtggactcaacgtttagcccccacttataagtgagaacatgcagtgtttgtttggttttctgttcctgcattaattcacttagaatagtggtatccagctccattcatgttgctgcaaaagacattatttcatcctattttataggtgtgtagtattccatggtgtatgtacactgca-ttttttaaatccagtcttctgttaacaggcatctaagttgattccgtgtctttgctattgtgaatagtgttataatgaaaatatgcgtgcatatgtctatgacagaatgatttatattcctttgggtatatacccagtgatgggattgctgagttgaatggtagttctgttttaagttatttcagaaatctccaaactgctttccacaatggctgaaaaaatttacattcttgatgaaactggagagttccctgactccccttggca-ggatgtgcaacaggggtgtggcttgtctggccaccgtgtgtgctgtcaaaccccttactgggcaggggagcatgcagacaggcaggtgcaatagacagggcaagtggccatggtactgtctaggggtgggtgcctgcgactcccacagcccaagtgggcatgtgttacagtgcactcttttagctttgccatccacagactgcttaagtgttaacctgttcagtgccctcttggtacccagttccttgtccagcatccagaaagaattaagttgcacacagacttgaggatggtgaa--tgtgggggttttattgagtggtggaggtggcactcaatgggatggatggggagctggaaaggggatggaat-ggaagatgatcttctccgggagctttgccatccggaggctgatctctccaaccactgccagccaaactcctcttggcattcaggtgctccttctcttctttctgccacatcattctgcaattctgctcttctgttcatctcctcatctgcttgtctgcttctggagcctggggtctgggacatatacgggtacaggacagggggtgcatgctgagctgaaagacaacttttgggtgcaaaagcaggaatgccttttcccatttagggccatgggtttccaggcttgtgggcagggctttgccagggaaccactctcttctacccagtatttccctgtctcctttctatatcaccaccagcagtgtataagcattcccctttttccacaaactcggcaccgtctgttttgttttgattttttaataatagccattctgaccggtgtgatatggtatctcatggttctgattttctgatgattagtgatgttgaatattttttcatatggttgttttccacacatacgttgtcttttgaaaaAAGAAtccacagacggcttaagtgttaacctgttcagtgccctcttggtacccaagtccttgtccagcatcca-gaaagaagttgcacatggacttgaggatggtgaatgtgggggttCATGTTCTTTGCCTAtttgtagtgggtttgctttttgcttattgattctttatacatgctgagtgttagacatttttcagatatgtaatttgaaaatattttcttctgttctgtagggtgttctctgttgatagtttc-ttttgctgtgctgaagctctttagtttcattaggtcccactcctcaattcttcttgttgcaattgcttttggaatcttcatcatgaaatctttgccagcgtctatgtccagaatgatatttcctaagttatcttctagggtttatatagttttgggtcttacataagtccttcatccatcttgagttgatttttgtatatggtgaaaggaagggagtgtacatgcccctgtgatattgttcctaatatccaggtttggagaag---atattatactcaatattgcaggaggtgtcgaccaccctgaatattacttttaatatccggggagagagggtgatattactctcaatatcatcctctccccccacaccctgcatagtacaaacaatatcaaagagggtctgtgcaacacgtgcaatattgggagtaatatcctcccccaacatggatattagaaacagtatcacaggaggttgtacaccacctgcgatattggggagtactatcattttctttccccatggatatttagaacaatatcacaaaggcggtgtacaacccctgctatattgggagaaatactgtactttccccacctagatattaggaactatatcac-------ggggggttatacaccgctgcatcattgggagtaatatcatcctttccctccctggatattaggaacaatacctcatgggtgtgtacaccctgttccatattgggattaat---attttctcccttgctggacataaggaacaatataacgaggggtatacactccttatgatattgccagtaatattatagactctccccagggttattagaaacagtatcagagaggggtgtacatcccctgcgatattgggaataatattctttatttccctggatattaggaataatatcgcaaaggggttgtataccccccgtgacattttaattaatataatcttccccactgaatattaggaacaaattcccaggggattgtacaccacctgcaatatggacagctatatcattgtctctcccccgaatattaggatcaatatcacacgggggttgtaca s panTro4.chr2A 18537884 3211 - 113622374 TTACAATTATGTAAATGTGTGTGTAATGTTATTTGTAAGTTCAATAAAGTCATGCTTGTACATAGTTTCAATTCATGCTTCTAAAAACCACTCAATGTAGTcattatcgtatgttaataaataatctctgaaaatatgcttctggtagttgcacaatatcccttcataaagattgtcatgctgtttttaagtcatacttttgggtacgtaggttatatctgatattttcctgctacatatatactattataaatctattagtagttga-ttttttgtcaacatatatgattgttttctcaCAACAGTACAAGAGTTGGTTGTAACtttatttccttccaacatttattttaggttcag-cgggtacatgtgcaggtttattatgtgggtaaaatgtgtgtcagtggggtttggtgtaaagattacgtagtcatccaggtagtgagcgtagtatctaatagggagttttttgatcctcactct-ccccccaccctccacccacagtagaccttgtgtctattgttcccttctttgtgtccacatatgtggactcaatgtttagcccccacttataagtgagaacatgcagtgtgtgtttggttttctgttcctgcattaattcacttagaataatggtctccagatagattcatgttgctgcaaaag---tcatttcatcctattttataggtgtgtagtattccatggtgtattt---------tttttttaatctagtcttctgttaacaggcatctaagttgattccatgtctttgctgttgtgaatattgttataatgaaaatatgtgtgcatatgtctatgacagaatgatttatattcctttgggtatatacccagtaatgggattgctgggttgaatggtggttctgttttaagttatttcagaaatctccaaactgctttccacagtggctgaactaa-ttacattcctgatgaaactggagagttccctgactccccttggcagggatgtgcaacaggggtgtggcttgtctggccaccgtgtgtgctgttaaacccc-tactgggcaggagagcatgcagacaggcaggtgcaaaagccagggcaagtggccatggtagcgtctaggggtgggtgcctgcgactcccacagtccaagtgggcatgtgttacagtgcactcttttagctttgccatccacagacagcttaagtgttaacccgttcagtgccctcttggtacccaggtccttgtccagcatccagaaagaattaagttgcacacagacttgagaatggtgaatgtgtgggggttttattgagtggtggaggtggccctcaatgggatggatggggagctggaaaggggatggaatgggaagatgatcttccccaggagctttgccatccagaggttgatctctccaaccactgccagccaaactcctcttggcattcagatgctccttctcttctttctgccacatcattctgcaattctgctcttctgttcatctcctcatcggcttgtctgcttctggagcctggggtctggggtttatacaggtacaaggtagaggg-gcatggtaagctgaaagacaacttttgggtgcaaaagcaggaatgcctgttcccatttagggccatgggtttccaggcttgtgggcagggctttgccagggaaccgccctcttctatccagtatttccctgtctcctgtctgtatcaccaccagcagtgtataagcattcccttttttccgcaagctcaccaccgtctgttatgttttgactttttaataatagccattctgaatggtgtgatatagtatctcatggttctgattttctgatgattagtgatgttgagtattttttcatatgcttgtttgccacatgtacgtcatcttttgaaaaAAGAAtccacagacagcttaagtgttaacccattcagtgcc--cttggtacccaagtccttgtccagcatccaggaaagaagttgcacacggacttgaggatggtgaatgtgggggttcatgttttttgcctatTTGTAGTGGgtttgttttttgcttattgattctttatacatgctgagtattagaccttttccagatgtgtaatttgaaaatattttctcctgttctgtagggtgttctctgttgataatttctttttgctgtgctaaagctctttagtttcattaggtcccactcgtcaattcttcttgttgcaattgcttttggaatcttcatcatgaaatctttgccagcgtctatgtccagaatgatatttcctaagttttcttctagggtttttatagtttagggtcttatgtaagtccttcatccgtcttgagttgatttttgtatatggtgaaaggaagggagtgtacacgcccctgtgatattgttcctaatatccaggttgggagaggataatattacactcaatattgcaggaggtgtcaaccaccctgaatattgcttttaatacccggggagagagggtgatattactcccaatatcatcttatccccccaccccctgcatagtagaaacaatatcaaagggggtctgtgcaacaagtgcaatattgggagtaatatcctccccccacctggatattagaaacaatatcac--ggggttgtacacctcctgcgatattggggagtgctatcattttctttccccatggatattgagaacaatatcacaagggcagtatacaacccctgctatattgggagtaatattgtactctccccacctagatattaggaacaatatcac------tggggggttatacaccactgcaacattgggaataat---atcctttccctccctggatattaggaacaatatctcatgggtgtgtacaccccattccatattgggattaatatcattttctcccttgctggacataaggaacaatataacgggggatgtacactccctgtgat-ttgccagtaatattatagactc-ccccagggatatcagaaacagtatcaaagaggggtgtacatcccctgcgatattgggaataatattctttctttccctggatattaggaataataccacaaagggggtgtatgccccctgtgacattttaattaatatcatcttccccactgaatattaggaacaaattcccagggggttgtacaccacctacaatatggacagctatatcattgtctctccctcgaatattaggaacaatatcacagggtgggtgtaca i panTro4.chr2A I 13 C 0 s ponAbe2.chr2a 109909484 3200 - 113028656 TTATAATtatgtaaatgtgtgtataatgttatatataagttcaataaagtcatgcttatacatagtttcaattcatgcttctaaaaaccactcaatgtagtcattatcatatgttaataaataatctctgaaaatatgcttctagtagttgcacaatattccatcataaagattgtcatgctgtttttaagtcgtacttttgggtatataggttatatctgatatttttgtgctacatatatactattataaatctattagtagttgatttttttgtcaacac--atgattgttttctcaCAACAGTACAAGAGTTGGCTGTAACtttatttccttccaacatttattttaggttcagccgggtacatgtgcaggtttattatatgggtaaaatgtgtgtcagtggggtttggtgtacagattacgtagtcatccaggtagtgggcgtagtatctaatagggagttttttgatcctcactct-ccccccaccctccacccacagtagactttgtgtctattgttcccttctttgtgtcc----ttgtggactcaatgtttagcccccacttataagtgagaacatgcagtgtttgtttggttttctgttcccgcattaattcacttagaataatggtctccagctccattcatgttgctgcaaaagacattatttcatcctattttataggtgtgtggtattccatggtgtatgtacgctgcatttttttaaatccagtcttctgttaacaggcatctaagttgattccgtgtctttgctattgtgaatagtgttataatgaaaatatgcgtgcatatgtctataacagaatgatttatattcctttgggtatatacccagtaatgggattgctgggttgaatggtagttctgtt-----gtatttcagaaatctccaaactgctttccacagtgactgaactaatttacattcctgatgaaactggagagttccctgactccccttggca-ggatgtgcaacaggggtgtggcttgtctggccaccgtgtgcgctgtcaaaccccttactgggcaggggagcatgcagacaggcgggtgcaaaagccagggcaagtggccatggtagcgtctaggagtgggtgcctgcaactcccacagcccaagtgggcatgtgttatagtgcactcttctagctgtgccgtccatagacggcttaagtgttaatccgttcagtgccctcttggtacccaggtccttgtccaacatccagaaagaattaagttgcacacagacttgaggatggtgaa--tgtgggggttttactgagtggtggaggtagccctcaatgggatggatggggagctggaaag-----------ggaaggtgatcttccccaggagctttgccatccagaggctgatctctccaaccactgtcagccaaacttctcttggcattcagatgctgcttctcttctttctgccacatcattctgcaattctgctcttctgttcatctcctcatctgcttgtctgcttctggagcctggggtgtggggtttatatgggtacaggataggggg-gcatagtaagctgaaagaaaacttttgggtgtaaaagcaggaatgcctgttcccatttagggccatgggtttccaggcttgtgggcaggtctttgccagggaaccaccctcttctatccagtatttccctgtctcctgtctatatcaccaccagcagtgtataagtattcccttttttccacaagctcaccaccgtctgttatgttttgactttttaataatagccattctgactggtgtcatatggtatctcatggttttgattttctgatgattagtgatgttgagtattttttcatatgcttgtttgccacatgtacatcgtcttttgaaaaAAAAAtccacagacagcttaagtgttaacctgttcagtgcc--cttggtacccaagtccttgtccagcatcca-ggaagaagttgcacacggacttgaggatggtgaatgtgggggttCGTGTTCTCTGCCTATTTGTAGTGGgtttgttttttgcttattgattccttatacatgctgagtattagacctttttcagatatgtaatttgaaaatattttctcctgttctgtagggtgttctctgttgataatttc-ttttgctgtgctgaagctctttagtttcattaggtcccactcgtcaattcttcttgttgcaattgcttttggaaccttcatcgtgaaatctttgccagcgtctatgtgcagaatgatatttcctaagttttcttctagggtttttatagttttgggtcttacataagtccttcatccatcttcagtttatttttgtatatggtgaaaggaagggagtgtacacgcccctgtgatattgttcctaatatccaggttgggagaggataatattacactcaatattgcaggaggtgtcgaccaccctgaatattgctattaatacccggggagagagggtgatattactcccaatatcatcctcttctcccactccctgcatagtagaaacaatatcaaagggggtctgtgcaacacgtgcaatactgggagtaatatcctccccccacctggatattagaaacaatatcacagggggtt---caccacctgcgatattggggagtactatcattttctttccccatggatattgagaacaatatcacaagggcggtgtacaacccctgctatattgggagtaatattgtactctccccacctagatattaggaacaatatcacagtggggggggggttatacaccactgcaacattgggaataat---atcctttctctccctggatattaggaacaatatctcatgggtgtgtacacgccattccatattgggattaatatcattttctcccttgctggacataaggaacaatataacggggggtgtacactgcctatgatactgccagtaatattatagactc-ccccagggatattagaaacagtatcaaagaggggtgtacatcccctgcgatattgggagtagtattctttctttccctggatattaggaataataccacaaagggggtgtatgccccccatgacattttaattgat---atcttccccactgaatgttagggacaaattcccagggggttgtacaccacctgcaatgtggacagctgtatc---gtttctccctcggatattgggaacaatatcacaagggggttgtaca i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=12592.000000 s hg38.chrUn_GL000218v1 11614 153 + 161147 ccccctgtgatattgggagtaactttatacccttttcacatggatattaggaacaatatcatagggtgggtgtacacccactgcgatattgggagtaatatcatcctctaccccctgggtattatgaacaatatcatggggagggggtgtatg s ponAbe2.chr2a 109912684 152 - 113028656 ccccctgcgatattgggagtaactttataccctttccacatggatattaggaacaatatcacagggtgggtgtacccccactgcgatattgggagtaatatcatcctctaccccttggatattaggaa-aatatcacagggagggggtgtacg i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I e panTro4.chr2A 18541095 0 - 113622374 C a score=727617.000000 s hg38.chrUn_GL000218v1 11767 3071 + 161147 ccctctgtgatattgggagtaatatcatcctgtcccctctggatattgggaatgatattacagcgggg--ctgtaccttttctgcactattgggagtggtatcaccctctccccctatggatgttaggaacaatatcacaaagggggtgtacacatcctgcgatattgggagtaatattgtccactcttcccctggatattaggaacaatatcacaggcggagtgtacaccacctgctattttaactgtaatattattctcttccaacctggatattaggaataatataacaggaggggtgacaaccacctgtgatattgggagtaatatcattctctccccccatggatattgagaacaatatcacaggagcagtttacacctcctgcgacatttagagtaatatcatccttttcccccatggatattaggaacgatatcgcatgggaagtgtacaccccc-gccatattgggagtaatattttctcccttgctggacattaggaacaatatcacgggaatgcacaccccctgtgatattgccagtaatatcgtagtctcctcccaggatattaggaacaatatcacaaggggggtgtacgtgccctgtgatattggaagtaatatcatcgactccccccacggatattagtaacaatatcagaaggggtgtacaccccttgcgatatttatagtactatcatcctataccccttggatattaggaaaaataccacgggggggtgtatacccactgtgatattgggagtaatttcatcctctaccccttggatgttaggagcagtatcacaagggggg---tgtgcaccctctgtgatattaagaataatacc-attctctcctcctctggatactaggaataatatcacagggctggtgtgcaccttttgcattatttggagcaatatcaccctctccccaacttgatattagagacaatatcatggggggtggcgtgtaacaccctgcactgttgggagtaatatcatctagtcttcccctggatataagaaacagtatcacagaagggttctacacctccagagattttgggagtaatatcatcctctccaaatctggatattaagaacagtataatggggtgtggggagtaatatgttgggagtaatacaatcctaccccccacttgatattaggaacaatatcgcaaaacgtgtgtacacccactgtgatatttggagtaatatcaacatttccccacctggtatcacggggagagtgtacactccttatgatattggaagtatcattgtctctcactctcgatattaggaaaaatagcacaggatgtgtgtacactccctgtgattttgggaagaacatcataccctttcgtctttgatattaggaacaatatcacagagggggtgtacaacttctgcgatattgtagtattctttcttcccatggatattaggaatgatatcccggggggcatgttgtacaccccctgtgatacggacagtaatatcattgtccttccccctacatattaggaacaatatcacaaggggag--tg--taca-ccccctggatattagaaactatcacaggggggctgtacaacctctttgatactgtgagtaataccattgtctgccctcctggatattaagaacaatattatagggtgggtgtacaccccctgcaatattgggaataatatcatcctctcttccccgggatattaggaacggtatcacacgtggggtttacaccccctgcaattttgtcagtaatattacttctggatgttattgaatatatcacagtgggggtgtacaccccctgtgatatggggagtaatagcatcctctttcccactggatactacaaacaatatcacaggttgtgtacaacctcctgtgatattgttcacaatatttaggtgaggagaggatgatattactccatatatcgcagggagtgttacatcccctgtaatattgttcataatatttagaagaggacagaatgatattactcccaatatagtaagaagcatacactcccctgtgatactgttcataattttttggggattagaggatgatattacttccaatat--------------------------------------------------------------------------------------------------------cacagggagtgtacactggtgatattgtttataattttcagtggattagaa---gatattattccgaatatcacaggggttgtacatccccatgtgatattgtt---aatatccagtgggaaagaggatgatattactccccatatcacgggggatgtaaacccgtttgtggtattgtctcttacatccggggggggagaggatgatattactctgcatatcatagagggtg--cacacggctgtaatgttgtccataacatccagaggggaagataatattattcccatgtttcagaaggtgtacacacccctgtgatagtctctgtaacgtttagggaagaaggggaagatactactccagatatcgcagggggtgtacacccccctgtgatactgttcgtaaggtttagggggaagaggatgatattactccccatatcgaagggattgtacatctccttatatattgtccataacatccagggcaggagaggatattactactccccatattgcagggggtggacaccccccctgtaaatatgtctaacatccaggcagggacaggaggatattattccccataa-cgcagagaaagtaaacctcctgtgatattgtccataacatccagtggggagaggatgatatcactccccatattgcagggggtgcacactccactctgatattggccgtaatacccggaggtgggtgaagtatgaagtcactacacatatcgcagggATTATTAGTATCAGATTGTTTGAAGGGCTCACAGTAAGGATAGTAGTAGGGCGAGTTCTAACTCAAATAGGGGAAATGTGA-TGGCTACTAGAAAGAATTTTATGGAGAAGGGAATGTGGGCAGAGGGTAGAGGGTCAAATCTGCATTCATAAGGGCTAGATTTTTCtatatatatttattttatacatatatatatatttttttttctctctctctctctatatatatatTAA s panTro4.chr2A 18541095 3125 - 113622374 ccctctgtgatattgggagtaatataatcctcttccctctggacattgggaatgatatcacagtggggggctgtaccttttctgcactattgggagtgatatcaccctctcctcctatggttattaggaacactgtcacaaagggggtgtacacatcctgcgatattgggagtaatattgtccactcttccccgggatgttaggaacaatattgcaggcggggtgtacacc--ccgcgattttgtctgtaatattattctctcccaacctggatattaggattaatataacaggaggtgtgtacaccacctgtgatattgggagtaataccattctctccccccatggatattgagaacaatatcacaggggcggtttacacctcctgcaacatttagagtaatatcatccttttcccccatggatattaggaacaatatcgcatgggaagtgcacaccccctgctatattgggagtaatactttctcccttgctggacattaggaacaatatcacgggaatgcacaccccctgtgatattgccagtaatatcgtcgtctcctcccaggatgttaggaacaatatcacaagggtggtgtacacgcacagtgatattggaagtaatatcatccactccccccatggatattaggaacaatatcagaaggggtgtacaccctctgtgatatttacagtactaccatcctataccccctggatattaggaataataccatggggggacgtacacccactgtgatattgggagtaatttcatcctctaccccttggatatcaggagcaatatcacaagggggggggtgtacaccctctgcgatgttaaaaataatacc-attctctccccctctggatactaggagtaatatcacagggctggtgtgcaccctttgcactattgggagtaatatcaccctctccccaacttgatattagaaacaatatcatggggggtggcgtgtaacaccctgcgctgttgggagtaatatcatctagtcttcccctggatataagaaacaatatcacagaaggggtctacacctcctgagattttgggagtaatatcatcctctccaaatctggatattaagaacagtataatgggg----gggagtaatatattggaagtaatataatcctctcccccacttgatattaggaacaatatggcaaaacgtgtgtacacccactgtgatatttggagtaatatcaacatttccccacctggtatcacggggggagtgtacactccttacgatattggaagtaatgctctctctcactctggatattaggaaaaatatcacagggtgtgtgtacactccctgtgattttgggagtaacatcatacatttccgtctttgatattaggaacaatatcacagagggggtgtacaacttctgtgatattgtaatattctttcttcccatggatattaggaatgatatcctggggaggg-gttgtacacccactgcgatatggacagtaatatcgtggtccttccccctacatattatgaacaatatcacaagagggggctggataca-ccccctggatattagaaactgtgacgggggggctgtataacctctttgatattgtga---------tcctcttccctcctggatattaagaacaatatcatagggtgggtgtacaccccctgcaatattgggaataatatcatcctctcttccccgggatattaggaacaatatcacaggtggggtttacaccccctgcgattttgtcagtaatattacttctggatgttattgaatatatcacagtgggggtgtacaccccctgcgatatggggagtaatagcatcatctttcccactggatactacaaacagtaccgcaggttgtgtacaatttcctgttatattgttcacaatatttaggggaggagaggatgatattactccacatatcgcaagacgtgttaaatcccctgtaatattattcataatatttagaagaggacaggatgatattactcccaatatcgtagggagtatacactcccctgtgatactgtttgtaatttttaggggattagaggatgatattactcccaatatggcaggaggtgta-----------------------------aacacctctgcaatatagttcgtaatattcaggggctgagaggataatattactcccaatatcgcagggagtgtacactcgtgatattgtttataattttcagtggattagaa---gatactatttctaatatcgcaggggttgtacatccccgtatgatgttgtttgtaatatccagtaggaaagaggatgatat-actccccatatcacaggggatgtaaacccatttgtggtattgtcccttacatc-ggggggggagaggat---attactccgcatatcatagggggtgtacacactgctgtaatgttgtccataacattcagaggggaagaaaatattattcccatgtttcaggaggtgtacacacccctgtgatagtctctgtaacatttagggaagaaggggatgatactactacagatatcgcagggggtgtacatccccctgtgatactgttcgtaaaatttagggggaagaggatgatattactccccatttcgaagggattgtacacccccctatatgttgtccataacatccagggcgggagaggatattactactacccatattgcagggggtggacacccccc-tgtaaatatatctaacatccaagcggggacaggaggatattattcccccttatcgcagggaaagtaaaccccctgtgatattgtctgtaacatccagtggggagaggataatgtcattccccatattgcaggggatgcacactccactctgatattggctgtaataccc--agggggg-gaagtatgatgtcactacacatatcgcagggATTATTAGTATCAGATTGTTTGAAGGGCTCACAGTAAGGGTAGTAGTAGGGCGAGTTCTAAGTCAAATAGAAGAAATGTGA-TGGCTACTGGAAAGAATTTTATGGAGAAGGGAATGTGGGCAGAGGATAG--GATCAAATCCACATCCGTAAGGGCTAGATTTTTCtatatatatttattttatatatatatatatattt----------ctctttctatatatatatatTAA i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109912836 3085 - 113028656 ccctctgtgatattgggagtaatatcatcctctttcctctggatattgggaatgatagcacagtgggg--ctgtaccttttctgcactattgggagtgatatcaccctctccccctatggatattagaaacaatatcacaaagggggtgtacacatcctgtgatattgggagtaatactgtccactcttccccgggatattaggagcaatatcacaggcggggtgtacaccccctgcgattttatctgtaatattattctctcccaacctggatattaggaataatataacagaaggtgtgtacaccacctgtgatattgggagtaataccattctctccccccatggatattgagaacaatatcat--gggcggtttacatctcctgcgacatttagagtaacatcatccttttcccccgtggatattaggaacaatattgcatgggaagtgtacaccccctgccatattgggagtaatattttctcccttgctggacattaggaacaatatcacgggaatgcacaccccctgcggtattgccagtaaaatcgtcgtcttctcccaggatattaggaacaatatcacaatgggggtgtacacaccctgtgatattggaagtaatatcatccactccccccatggatattaggaacaatatcagaaggggtgtacaccccctgtgatattcacagtagtatcatcctataccctatggatattaggaaccaca----ggaggggtgtacacccactgtgatattgggagtgatttcatcctctaccccttggatattaggagcaatatcacaagggggg---tgtacaccctctgtgatattaaaaataacaccaattctctccccctctggatactaggaataatatcacagggctggtgtgcaccctttgcgctattgggagtaatatcaccctctccccaacttgatattagaaacaatgtcatggggggtggcgtgtaacaccctgcgctgttgggagtaatatcatctagtcttcccctggatataagaaaaaatatcacagaaggggtctacacctcctgaaattttgggagtaatatcattctctccaaatctggatattaagaactgtataatgggg----gggagtaatgtattggaagtaatataatcctctcccCCACTTgatattaggaacagtatggcaaaacgtgtgtacacccactgcgatatgtggagtaataccaacatttccccacctggtatcacggggggcgtgtacacaccttatgatattggaagtaatattttctctcactctggaaattaggaaaaatatcacagggtgtgtgtacactttctgtgattttgggagtaa---catacccttccgtctttgatattaggaacaatatcacagagggggtgtacaacttctgcgatattgtaatagtctttcttcccatggatattaggaacgatatcctggggggg--gttgtacacctcctgcgatatggacagtaatatcatggtccttccccctacatattaggaacaatatcacaagggggg--tg--tacacccccctggatattagaaactatcac--gggggctgtacaacgtctttaatattgtgagtaataccattctctctcctcctggatattaagaacaatatcatagggtgggtgtacaccgcctgcaatattgggaataatatcatcctctcttccctgggatattaggaacaatatcacaggtggggtttacaccccttgcgattttgtcagtaatattacttctggatgttattgaatatatcacagcgggggtgtacaccccctgtgatatggggagtaatagcatcctctttcccactggatactataaacaatatcgcaggttgtgtacaacctcctgtgatattgttcacaatatttaggggaggagaggatgatattactccacatatcgcagggcgtgttaaatcccatgtaata---ttcataatatttagaagaggacaggatgatattactcccaatatcgtagggagtatacactcccctgtgatactgttcatgatttttaggggattagag---gatattactcccaatatggcaggaggtgtaaacacccctgtgatattgttcgtaatatt-----------------------------caggggctgagagg---atattactcccaatatcgcagggagtgtacactcgcaatactgtttataattttcagtggattagaagatgatattattcccaatatcgcaggggttgtacatccccgtgtgatattgtttgtaatatccagtgggaaagaggatgatattactccccatatcacaggggatgtaaacccatttgtggtattgtcccttacatc-tgggggggagaggatgatattactccgcatatcatagggggtgtacacaccgctgtaatgttgtccataacatccagaggggaagagaatattattcccatgtttcagaaggtgtacacacccctgtgatagtctctgtaacatttagagaagaaggggatgatactactacagatatcgcagggggtgtacatccccc-atgatactgttcgtaacatttagggagaagaggatgctattactccccatatcgaagggatggtacacccccgtatatattgtccataacatccagggcaggagaggatattactactccccatatcgcagggggtggacacccccc-tgtaaatatgtctaacatccaggcggggacaggaggatattattccccatat-cgcagggaaagtaaaccccctctgatattgtctgtaacatacagtgggtagaggatgatgtcactccccatattgcagggggtgcacactccactctgatattggccataatatcc--agagggg-caagtatgatgtcactacacgtatcgcagggattgtCAGTATCAGATTGTTTGAAGGGCTCACAGTAAGAGCAGTAGTAGGGCAAGTTCTAAGTCAAATAGGAGAAATGTGATTGGCTACTAGAAAGAATTTTATGGAGAAGGGAATGTGGGCAGAGGATAGAGGGTCAAATCCGCATCCGTAAGGGCTAGAT----------------------AACGTATA-------------------TTCTGTCTCTTTATATATATAAA i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=2988.000000 s hg38.chrUn_GL000218v1 14838 8 + 161147 GTTGTGGG s panTro4.chr2A 18544220 8 - 113622374 GTTATGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109915921 8 - 113028656 GTTGTGGG i ponAbe2.chr2a C 0 C 0 s rhiRox1.KN298205v1 1074768 8 - 4160107 GTTGGGGT i rhiRox1.KN298205v1 N 0 I 6828 e gorGor3.chr2A 18834921 9949 - 111351968 I a score=322550.000000 s hg38.chrUn_GL000218v1 14846 1259 + 161147 AGCCAAAATGTAATAATTATTAGTAACAGGGCTAATAGGGTGTTGATTACTAGGATTAATGTTAGGTGAATTACTGTTTTTTGGATGCTATCGAAACTTTGGAAATCATGGTACTATTTATACTAAAAGAGTAAGATCCTCATCAATAAATAGAAACATACAAGAATAGTCATACTACATCTACAAAGTGTCGATATCAGGCAGCAGCTTCAAAGGCAAAGTGATGACTAGATGTAAAGTGGTATTTTAGTTGGCGGAGAAGGCAGAC--TGAGGAATGTTGATCCAATAATGATGTGAAGTCTGTGAAAGCCTGTAGCTATAAAAAATGTTGAGCCATAAATACCA-------TCAGAAATAGCAAAGGGAGCTTTGAAGTATTCTGAGACTTGTAGGAGGGTGAAGTAAATACCTAATATAATTGTAATAAGTAGTGCTTGGATTGTATGTTTTTGATTATTTTTTGTTAGGCTGTGATGGGCTCAAGTAATTGAAACTCCTGATGCAAGTAATACAGATGGATTCAGGAGAGGTACTTCCAGGGTGTCAAGGGGAGAAATACCTGTTGGGGGTCAATGTCCTCCTAATTCTGGAGTAGGGGCTAGGCTAGAATGGTAGAATGCTCAAAAGAATCCAGCGAAGAGAAATATTTCTGAGATAATAAATAGGACTATCCCATATTGGAGGCCTTTTTGAACAGTCGTTGTATAGTGGCCCTGAAATGTACTTTCTCTGATACAGACCACCCTTGTTCAGTTGAATACAGATCAATCACTTTAAGTAAGCTAAGTCCTTACTAAATTGATGAGACTTAAACCCACGAAAACTTAACAACTAAACTCCCTAGTCAACTGGTTTGAATCTACTTCTCCAGCTGCTGGGGG-AAAAAAGGTGAGAGAAGCAGGATTGAAGCTGCTTCTTTGAATTTACAATTCAACGTGAAAATCACCTCGGGACTGGTAAAAACAGGCCTTGACCTCTGTTTTTAGATGTACAG--------------------TCTAAT--------GCCCTACTCAGTCATTTTACCCTTTTTTCTCACTTCATTTATATTGGCTGAGAGTTGACTATTCTCAACCAACCATAAAGATATCGGGACATTATATTTATTATTTATCACATGAGCAAGGATAGTCAGTACAGCTTTAAG---CCTTATTCGAGCTGA----------------ACTCTACTAGATGATCAAATTT---ATGTCATTGTTATAGCCTATGCATTTGTCATAATTTTCTTTATAGTAATACTATAATTGGAGGTCTTGGCAACTGATTAGTCCC s panTro4.chr2A 18544228 1316 - 113622374 AGCCAAAATGTAATAATTATTAGTAACAGGGCTAATAGGGTGTTGATTACTAGGGTTAATGTTAGGTGAATTACTGTTTTTCGGATGCTATCGAAACTTTGGAAATCATGGTACTATTTATACTAAAAGAGTAAGATCCTCATCAATAAATAGAAACATACAAGAATAGTCATACTACATCTATGAAGTGTCAATATCAGGCAGCAGCTTCAAAGGCAAAGTGATGACTAGATGTAAAGTGGTATTTTAATTGGCGGAGAAGGCAGACAGTGAGGAATGTTGATCCAATAATGACGTGAAGTCTGTGAAAGCCTGTAGCTATAAAAAATGTTGAGCCATAAATACCAAATACCATCAGAAATAGCAAAGGCAGCTTTGAAGTATTCTGAGACTTGTAGGAGGGTGAAGTAAATACCTAATATAATTGTAATAGGTAGTGCTTGGATTATATGTTTTTGATTATTTTTTGTTAGGCTGTGATGGGCTCAAGTAATTGAAACTCCTGATGCAAGTAATACAGATGTATTCAGGAGAGGTACTTCCAGGGGGTCGAGGGGAGAAATACCTGTTGGGGGTCTGTGTCCTCCTAATTCTGGAGTAGGGGCTAGGCTAGAATGGTAGAATGCTCAAAAGAATCCAGCGAAGAAAAATATTTCCGAGATAATACATAGGACTATCCCATATCGGAGGCCTTTTTGAACAGTTGTTGTGTGGTGGCCCTGAAGTGTACTTTCTCAGATACAGATCACCCTTGGTCAGTTCAATACAAATCAATCACTTTAAGTAAGCTAAGTCCTTACTAAATTGATGAGACTTAAACCCACGAAAACTTAACAGCTAAACTCCCTAGTCAACTGGTTTTAATCTACTTCTCCAGCCGCTGGGGGAAAAAAAGGTGAGAGAAGCAGGATTGAAGCTGCTTCTTTGAATTTACAATTCAACATGAAAATCATCTCGGGACTGGTAAAAAGAGGCCTTGACCTCTGTTTTCAGATGTACAGACTCCGTTTTTAGATGTACATCTAGTAGATGTAAGCCCTACTCAGTCATTTTACCCTTTTTTCTCACTTCATTTATGTTCGCCGACAGTTGACTATTCTCAACCAACCATAAAGATATCGGGACATTATATTTATTATTTGGTGCATGAGCAGGGATAGTCGATACAGCTTTAAG---CCTTATTCGAGCTGAACTGGGTCACCCAGGTACTCTACTAGATGATCAAATTTATAATGTCATTGTTACAGCTTATGCATTTGTCATAATTTTCTTTATAGTAATACTATAATTGGAGGTCTTGGCAATTGATTAGTCCC i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109915929 1278 - 113028656 AGCCAAAATGTAATAATTATTAGTAACAGGGCTAATAGGGTGTTGATTACTAGGGTTAATGTTAGGTGAATTACTGTTTTTCGGATGCTATCAGAACTTTGGAAATCATGGTACTGTTTATACTAAAGGAGTAAGATCCTCATCAATAAATAGAAACATACAATAATAGTCATACTACATCTACAAAGTGTCAATATCAGGCAGCGGCTTCAAAGGCAAAGTGATGACTAGATGTAAAGTGGTATTTCAATTGGCGGAGAAGGCAGACAGTGAGGAATGTTGATCCAATAATGACGTGAAGTCTGTGAAAGCCTGTAGCTATAAAAAATATTGAGCCATAAATACCA-------TCAGAAATAGCAAAGGGAGCTTTGAAGTGTGCTGAGACTTGTAGGAGGGTGAAGTAAATACCTAATATAATTGTAATAAGTAGTGCTTGGATTATATGTTTTTGATTATTTTTTGTTAGGCTGTGATGGGCTCAAGTAATTGAAACTCCTGATGCAAGTAATACAGATGTATTCAGGAGAGGTACTTCCAGGGGGTCAAGGGGAGAAATACCTGTTGGGGGTCAATGTCCTCCTAATTCTGGAGTAGGGGCTAGGCTGGAATGGTAGACTGCTCAAAAGAATCCAGCGAAGAAAAGTATTTCCGAGATAATAAATAGGACTATCCCATATCGGAGGCCTTTTTGAGCAGTTGTTGTGTGGTGGCCCTGAAATGTACCTTGTCAGATACAGATCACCCTTGGTCAGTTGAATACAGATCAATCACTT----TAAGCTAAGTCCTTACTAAGTTGATGAGACTTAAACCCACGAAAACTTAACAGCTAAACTCCCTAGTCAACTGGTTTGAATCTACTTTTCCAGCTGATGGGGG-ATAAAAGGTGAGAGAAGCAGGATTGAAGCTGCTTCTTTGAATTTACAATTCAACATGAAAATCATCTCGGGACTGGTAAAAAGAGGCCTTGACCTCTGTTTTTAGATGTACAG--------------------TCTAAT--------GCCCTACTCAGTCATTTTACCGTTTTTTCTCACTTCATTTATGTTCGCTGACAGTTGACTATTCTCAACCAACCATAAAGGTATCGGGACATTATATTTATTATTTGGTGCATGAGCAGAGATAGTCGGTATAGCTTTAAGTCTCCTTATTCGAGCTGAACGGGGTCACCCGGGTACTCTACTAGATGATCAAATTTATAATGTCGTTGTTACAGCCTATGCATTTGTCATAATTTTCTTTATAGTAATACTATAATTGGAGGTCTT-GCAACTGATCAGTCCC i ponAbe2.chr2a C 0 C 0 e gorGor3.chr2A 18834921 9949 - 111351968 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=180.000000 s hg38.chrUn_GL000218v1 16105 1 + 161147 C s panTro4.chr2A 18545544 1 - 113622374 T i panTro4.chr2A C 0 C 0 s gorGor3.chr1 123829394 1 + 229507203 T i gorGor3.chr1 n 9949 I 1971 s ponAbe2.chr2a 109917207 1 - 113028656 T i ponAbe2.chr2a C 0 C 0 e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=300.000000 s hg38.chrUn_GL000218v1 16106 1 + 161147 C s panTro4.chr2A 18545545 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109917208 1 - 113028656 C i ponAbe2.chr2a C 0 C 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=546.000000 s hg38.chrUn_GL000218v1 16107 1 + 161147 T s panTro4.chr2A 18545546 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109917209 1 - 113028656 T i ponAbe2.chr2a C 0 C 0 s tupBel1.scaffold_66819.1-7837 6562 1 - 7837 T i tupBel1.scaffold_66819.1-7837 N 0 N 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=7634.000000 s hg38.chrUn_GL000218v1 16108 48 + 161147 GATAATTGGCGCCCCCTATATAGCATTTC-TCTGCATAAATAATATGAG s panTro4.chr2A 18545547 39 - 113622374 GATAATTGGCACCCCCGATATAGCACTTC-TCCGC---------ACGAG i panTro4.chr2A C 0 C 0 s ponAbe2.chr2a 109917210 49 - 113028656 GGTAGTTGGCGCCCCCGATACAGCATTTCTTCCGCATAAATAATATGAG i ponAbe2.chr2a C 0 N 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=70466.000000 s hg38.chrUn_GL000218v1 16156 833 + 161147 CTTCTGACTCCTCCCACCCTCCTTCCTATTATTACTTGCATCCACTATAGTAGAAGCCGGCACTGGAACCGGCTGAAGAGTCTCTCCTCCCTTAGCAGGAAACCTAACACATGCAGGCGCCTTTGTAGATTTCACTATCTTTTCACTCCACTTGGCAGGTGTTTCTTCTACTTCAGGGGCTATTAACTTTATTACCACAATTGTTAATATAAAACCCCCAGCCATGTCCCAATATCACACACCCCTCTTCATCTGATTAGTCCTAATTACAGCAGTTCTTCTACTCCTTTGTCTCTGAGTCCTAGCCTCCGGCATCACTATATTGTTAACTGACCGCAATCTTAATACTACTTTTTTCTACCTGGCTGGCGGAGGTGATCCTATCTTATGTCAGCATTTATTCAGATTCTTTGGTCACCCTGAAGTCTAAATCCTCATCCCACTGGGCTTTGGGATAATTTCCCACGCCGTAACACACTATTCTGGAAAAAAAAAGAACCATTCAGGTATATGGGCCTAGTGTGAGCTATAGGATCAGTTGGGTTCTTACGGTTTATTGTATGGGCCCACCATATATTTACGGTACAGATAGATGTGGATACATGAGCCTGCTTCACCTCTGC-TACTATAATTATTGATATTCCTACTAGCATCAAAGTTTTTAGCTGACTAGCTAGCTACACTTCATGGCGGTAATATCAAATGATCCTCCACAATGCTGTGAGCCCAGGGATTTATTTTCCTTTTTACAGTAGGAGGCCTAACCTGCATTGTATTGGCCAAGGCTTATATTATGGTTCATTCATATATTTAGAAACCTGAAAGTTTCTAAA s panTro4.chr2A 18545586 833 - 113622374 CTTCTGACTCCTCCCACCCTCCTTCCTGTTATTACTTGCATCCACTATAGTAGGAGCCGGCGCTGGAACCGGCTGAACAGTCTCTCTTCCCTTAGCAGGAAACCTAACACATGCAGGCGCCTCTGTAGATTTCACTATCTTTTCACTCCACTTGGCAGATGTTTCTTCTATTTTAGGGGCTATTAACTTTATTACCACAATTGTTAATATAAAACCCCCAGCCATGTCCCAATATCACACACCCCTCTTCATCTGATTGGTCCTAATTATAGCAGTTCTTTTATTCCTTTGTCTCCCAGTCCTAGCCGCCGGCATTACTATGTTGTTAAATGACCGCAATCTTAATACTACTTTTTTCTACCTGGCTGGCGGAGGTGATCCTATCTTATATCAGCATTTATTCAGATTCTTTGGTCACCCTGAAGTCTACATCCTCATCCGACTGGGCTTTGGGATAATTTCCCACATTGTAACATATTATTCTGG-AAAAAAAAGAACCATTCGGGTATATGGGCCTAGTGTGAGCTATAGGATCAATTGGGTTCTTACGGTTTATCGTATGGGCCCACCGTATATTTACAGTAGGGATAGATGTGGATACATGAGCTTGCTTCACCTCTGCTTACTATAATTATTGCTATTCCTACTGGCGTCAAAGTTTTTAGCTGACTAGCTAGCTACACTTCATGGCGGGAATATCAAATGATCCCCCGCAATGCTCTGAGCCTGGGGATTTATTTTCCTTTTTACAGTAGGAGGCCTAACTGGCATTGTGTTGGCTGAGGCTTATATTATGGTTCATTTATATATTTAGAAACCTGAAAGTTTGTAAA i panTro4.chr2A C 0 C 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=452.000000 s hg38.chrUn_GL000218v1 16989 7 + 161147 TAAATTC s panTro4.chr2A 18546419 7 - 113622374 TTAGTTG i panTro4.chr2A C 0 C 0 s tarSyr2.KE946997v1 105081 7 + 175802 TAAACTT i tarSyr2.KE946997v1 N 0 N 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=741.000000 s hg38.chrUn_GL000218v1 16996 15 + 161147 TAAAAAAGTTGTAAA s panTro4.chr2A 18546426 13 - 113622374 TAAAAAAGTTGT--A i panTro4.chr2A C 0 C 0 e gorGor3.chr1 123829395 1971 + 229507203 I e rhiRox1.KN298205v1 1074776 6828 - 4160107 I a score=-829.000000 s hg38.chrUn_GL000218v1 17011 1 + 161147 -A s panTro4.chr2A 18546439 1 - 113622374 -A i panTro4.chr2A C 0 C 0 s rhiRox1.KN298205v1 1081604 1 - 4160107 T- i rhiRox1.KN298205v1 I 6828 N 0 e gorGor3.chr1 123829395 1971 + 229507203 I a score=86080.000000 s hg38.chrUn_GL000218v1 17012 1068 + 161147 AAAACCCAAGCTGAAATAACTACGAAAGTGCCTTTAATATTCTGAAGACAAAATAGCTAAGATCCAAACTGGGAGTAGATACCCCGCTATGCTTAACCCTAAACTCGAATAGTTAGATCAACAAAACTGTTCGCCAGAACACTACAAGCAACAGCTTAAAACTCAAAGGACTTGGCGGTGCTTTACATCCCTCTAAAGGAGCCTGTTCTATAATCGATAAACCCCAATTTACCTCACCACCTCTTGCCCAGACTATATACCTCCATCTTCAGCAAACCCTGGAAAGGCCACAGAGTAAGCATAAGTATCTACATAAAAACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATAGGTACGTTTTCTACATCCAGAAAAATCTCGTGACAACCGTTATGAAATCTAAGGGCTCAAGGAGGATTTAGCAATAAATTGAGAGCAGAGTGTTTAATAGAATAAGGCCATGAAGCACGCACACACCGCCCTTCACCCTCCTCAAATATATTCTAGAAACTCATtgtacactcccctgtgatattgtccataatatccagggagggagagaatga-------------ttttatttatttatttttttgagacagaccctcgctctgtcgcccaggctggagtgcagtggcctgatcttggctcactgcaagctccgcctcccaggttcacaccattctcctgcctcagcctccctagtagctgggactacaggcgcctgccaccgcgcccggttaattttttgtatttttagtagagacggggtttcaccatgttagccaggatgatctcaatatcctgacctcgtgatccacccacctcggcttcccaaagtgctgggattacaggtgtgagccaccgcgcctggccagagagaatgattttactccccatatcgcaggggatttacattcctctgcattatttttcgtaatatccagggggaagaggaagatattactccccatatagcatgggagaacaattccctgcaatattgttcataatatctct---ggggggagagaatgatatttctccttttattgcaggaagtgtacaccccc s panTro4.chr2A 18546440 1083 - 113622374 AAAACCCAAGCTGAAATAACTGCGAAGGTGCCTTTAATATTCTGAAGACAAAATAGCTAAGACCCAAACTGGGAGTAGATACCTCGTTATGCGTAACCCTAAACTCGAATAGTAAGATCAATAAAACTGTTTGCCAGAACACTACAAGCAACAGCTTAAAACTCAAAGGACTTGGCAGTGCTTTATATTCCTCTAAAGGAGCCTGTTCTGTAATCGATAAACCTCAATTTACCTCACCACCTCTTGCCCAGCCTATATACCTCCATCTTCAGCAAACTCTGGAAAGGCCGCAGGGTAAGCACAAGTATCTACATAAAAACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGTACGTTTTCTACACCCAGAAAAATCTCACGACAACCCTTAAGAAATCTAAGGGCTCAAGGAGGATTTAGCAATAAATTGAGAGCAGAGTGCTTAATTGAATAAGGCCATG-AGCACGCACACACCGCCCATCACCCTCCTCAAATATATTCTAGAAACTAGTTGtacacccctctgtgatattgtccataatatccagggagggagagaatgatttgttttggtttttttttttttttttttttttgagacggagccttgctctgtcacatgggctggagtgcagtggtgtgatctcggctcattgaaagcttcgcctcccgggttcatgtcattctcctgcctcagcctcctgagtagctgggactacaggtgcccgccactgcgcctggctaattttttgtgtttttggtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcctgcctcgtcctcccaaagtgctgggattacaggtgtgagccactgcacccggccagagagaatgattttactccccatatcacaggggatttacattcccctgcgttatttttcctaatatccaggggaaagatgaagatgttactccccatatagcatgggagaacaattccctgagatactgttcatatcatctctggcggggggagagaatgatattactccttttatcacaggaagtatacaccctt i panTro4.chr2A C 0 C 0 e gorGor3.chr1 123829395 1971 + 229507203 I a score=300.000000 s hg38.chrUn_GL000218v1 18080 1 + 161147 c s panTro4.chr2A 18547523 1 - 113622374 c i panTro4.chr2A C 0 C 0 s gorGor3.chr1 123831366 1 + 229507203 c i gorGor3.chr1 I 1971 I 6571 a score=28851.000000 s hg38.chrUn_GL000218v1 18081 372 + 161147 ttgcgatattgtttataacatctagtgggggagaggacgatgttactccccatattgcagggggtgtacaaccccctagaatattgttcataatatccacacggggaggagatgatgttactacccatatcgccagggtgtactgccccctgccatattgtttgtaatatccaggctggaaaaggatgatattactccctgtatcacaggggatgtacacctccctgcga-----------------------------------------------------------------------------------tgtaatatccagggtgggagaggagtatattactccccatgaggcagagtgtgtatacacccctctgtgatattgttcataatatccactgggggatatgatattactcccaatatcgtaaacacctcatgtgtacaccatc s panTro4.chr2A 18547524 455 - 113622374 ttgcgatattgtttataatatctagtgggggagaggatgatgttactacccatattgcagggggtgtacaaccccctaggatattgttcgtaatatccacggggggaggagatgatgttactacccgtatcgccggggtgtactgccccctgccatattgtttgtaatatccaggctgggaaaggatgatattacttcctatattacaggggacgtacatccccctgcgatattattcgtaatacccataggggagataatactacttccaatatcgtaaacaccctgtgtgtacaccctctgtgatggtgtttgtaatatccagggtgggagaggagtatattactccctataaggcagtgtgtgtatacacccctctgtgatactgttcgtaatatccactgggagagatgatattactcccaatatcataaacacctcacgtgtacaccgtc i panTro4.chr2A C 0 C 0 e gorGor3.chr1 123831367 6571 + 229507203 I a score=273.000000 s hg38.chrUn_GL000218v1 18453 1 + 161147 t s panTro4.chr2A 18547979 1 - 113622374 t i panTro4.chr2A C 0 C 0 s gorGor3.chr2A 18844870 1 - 111351968 t i gorGor3.chr2A I 9949 I 538 a score=38943.000000 s hg38.chrUn_GL000218v1 18454 491 + 161147 gtgatattgtttgtaatatccagtaggggagaggatgatactactttccacatcccagggggtttacacccctctgtgatacagtttgtaatatccagagggggagagggttatattactcctcatattgcaggacatgtacacccccctgtgatattgtttgtaatattgttcccaatatccttttcccccatggata-taggaacagtatcacataggacgtgtacaccccctgccatattgggagtagtcgtgttttctcccttgctggacattaggaacaataccatgggttgggggtgcacaccccctgcgatattgacagtgatatcatccactatcccctaaata-tcggaacaatatcacaagggggatgtacacacttggcgatattgaaagtgatatgatcctctccccacctggatattaggaacaatatcacagaaggggtgtacaccccctgtgatattgacagtaatatcttctccccc s panTro4.chr2A 18547980 489 - 113622374 gtgatactgtttgtaatatccaatgggggagaggatgatactactttccacatcgcagggggtttaaacccctctgtgatatagtttgtaatatccag-gggagagaggatgatattacacctcatatcacagggtgtgtacacccccctgtgatattgtttgtaatattgttcccAATATCTTTTCCCCccatggatattaggaacaatattgcatgggaagtgtacaccccccgccacattgggagcagtagtgttttctcctttgctggacattaggaacaataccacgg---gggggtgcacaccccctgtgatattgacagtaatatcatccactataccctaaatgctaggaaaagtatcacaagggggatgtacacacttggcggtattgaaagtgatatgatcctctccccacctggatattaggaacaatatcacagaaggggtgtacaccccctgcgatattgacagtaatatcctctccccc i panTro4.chr2A C 0 I 1 e gorGor3.chr2A 18844871 538 - 111351968 I a score=0.000000 s hg38.chrUn_GL000218v1 18945 124 + 161147 ctggatattaggagcaatatcacagaagcgttgtacactccctgtgatattgacagtaatatcctctcccccccggatattaggaacaatatcacagaagaggtgtacacccagtgtgatattg e gorGor3.chr2A 18844871 538 - 111351968 I e panTro4.chr2A 18548469 1 - 113622374 I a score=-277.000000 s hg38.chrUn_GL000218v1 19069 3 + 161147 aca s gorGor3.chr2A 18845409 3 - 111351968 ttt i gorGor3.chr2A I 538 n 538 e panTro4.chr2A 18548469 1 - 113622374 I a score=0.000000 s hg38.chrUn_GL000218v1 19072 243 + 161147 gtaatttcctctccccctcccggatattaggaacaataccacgggggggtgtacaccccctgcgatattgacagtaatatcatcctctcccccccagatattagtaacaatatcaccaaaggtgtctacaccccctgtgatattgacagtaatatcctctcccccccacccagatattaagaacaataccacgggaggatgtacaccctctgtgacattgactgtaatatcaacctgtcgccc e gorGor3.chr2A 18845412 538 - 111351968 n e panTro4.chr2A 18548469 1 - 113622374 I a score=20468.000000 s hg38.chrUn_GL000218v1 19315 280 + 161147 ccctggatatgaggaagaatatcatgggggg-----tgcacaccctctgtgatattgggagtaatatcacccactatcccctaaatattaggaacaatatcacaaggcagggagagcaccgtctgcgatattgggagtaatgtcatcctttccctgcccctgcatactaggaataatatcacaggggatgtacacccccatgcgctattgggagtaacatcaccctttcttcccatggatattaggaacaatatcacagaagtggtgtacacATGCTGCActgta s panTro4.chr2A 18548470 280 - 113622374 ccccagatattaggaacaataccacggagggggagatgtacaccccctgcgatattgggagtaatatcatccactggcccctaaatattaggaacaatatcacaaggcagggagtacacacactgcgattttgggagtaatgtcatcgttttcccgcccctgcatactaggaata---tcacgggg--tgtacactcccatgcgctgttgggagtaatatcaccctttcttcccatggatattaggaacaatatcacagaagtggtgtacacacgctgCACTGTA i panTro4.chr2A I 1 C 0 e gorGor3.chr2A 18845412 538 - 111351968 I a score=171404.000000 s hg38.chrUn_GL000218v1 19595 100 + 161147 tagaacaaagcaggcagaggaaggtgggataaccttgctagctgaagcttctggct-------ctctttttttcttcttcccatgcaggacacctgattcccttctt s panTro4.chr2A 18548750 100 - 113622374 TAGAACaaagcaggcggaggaaggtgggataaccttgctggctgaggcttctggct-------ctctttttttcttcttcccgtgcaggacgcttgcttcccttcct i panTro4.chr2A C 0 C 0 s rheMac3.chr3 120035576 107 + 198365852 tagaacaaagcaggctgaagaaggtgggataaccttgctagctgaggcttctggcttagaagcctctttttttcttcttcccgtgcagtaagcttgcttccgttcct i rheMac3.chr3 N 0 C 0 s macFas5.chr3 114128051 107 + 192294377 tagaacaaagcaggctgaagaaggtgggataaccttgctagctgaggcttctggcttagaagcctctttttttcttcttcccgtgcagtaagcttgcttccgttcct i macFas5.chr3 N 0 C 0 s papAnu2.chr3 104174461 107 + 180432695 tagaacaaagcaggctGAAGAAGGTGGGATAACCTTGCTAGCTGAGGCTTCTGGCTTAgaagcctctttttttcttcttcccgtGCAGTAAGCTTGCTTCCGttcct i papAnu2.chr3 N 0 C 0 s chlSab2.chr21 51241620 107 + 127223203 tagaacaaagcaggctgaagaaggtgggataaccttgctagctgaggcttctggcttagaagcctctttttttcttcttcccgtgcagtaagcttgcttccgttcct i chlSab2.chr21 N 0 C 0 s calJac3.chr8 49635546 100 + 128169293 tagaacaaagcaggcagaggaagatatgataaccttgctagccgaggcttctggct-------ctctctatttcttcttcctgtgtaggacacttgcttccattcct i calJac3.chr8 N 0 C 0 e gorGor3.chr2A 18845412 538 - 111351968 I a score=348757.000000 s hg38.chrUn_GL000218v1 19695 154 + 161147 cctgcccttggacatgagactccaggttcttatgtctttggactctgggacttgcaccagcggcttccccgaggctctcaggccctcggcctcagactgaagactgcactgcgggctttcctggttttgaggcttttggacttggactgagcca s panTro4.chr2A 18548850 154 - 113622374 cctgcccttggacatcagactccaggttcttacgcctttgaactctgggacttgcaccagcggcttcaccaaggctctcaggccctcggcctcagactgaagactgcactgcgggctttcctggttttgaggcttttggacttggactgagcca i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500244 154 - 123690457 ccttcacttggacatcagactccaggttcttctgcctttggactctgggacttgcaccggcagcttccccgaggctctcaggccctcagcctgagactgaagtttgcactgcgggcttccctggttttgaggcttttggacttggactgagcca i nomLeu3.chr11 N 0 C 0 s rheMac3.chr3 120035683 154 + 198365852 cctgcctttggacatcagactccaggttcttccgcctttggactctaggacttgcaacagcggcttccctgaggctgtcatgccctcagcctcagactgaaggttgcactgcgggcttccctggttttgaggcttttggacttggactgagcca i rheMac3.chr3 C 0 I 1 s macFas5.chr3 114128158 154 + 192294377 cctgcctttggacatcagactccaggttcttccgcctttggactctaggacttgcaacagcggcttccctgaggctgtcatgccctcagcctcagactgaaggttgcactgcgggcttccctggttttgaggcttttggacttggactgagcca i macFas5.chr3 C 0 I 27 s papAnu2.chr3 104174568 154 + 180432695 cctgcctttggacatcagactccaggttcttccgCCTTTGGACTCTAGGACTTGCAACAGCGGCTTCCCTGAGGCTGTCATGCCCTCAGCCTCATACTGAAGGTTGCACTGctggcttccctggttttgaggcttttcgacttggactgagcca i papAnu2.chr3 C 0 I 27 s chlSab2.chr21 51241727 154 + 127223203 cctgcctttggacatcagactccaggttcttccgcctttggactctaggacttgcaacagcggcttccctgaggctgtcatgccctcagcctcagactgaaggttgcactgctggcttccctggttttgaggcttttcgacttggactgagcca i chlSab2.chr21 C 0 I 1 s calJac3.chr8 49635646 150 + 128169293 cctgcccttggacatcagactccaggttcttccgcctttggactctgacacttttaccagtggcttccctggggctctcaggccctctggctcagactgaaggctgcgctgcgggcttccctggttttgaggcttttggacttggtctaa---- i calJac3.chr8 C 0 C 0 e gorGor3.chr2A 18845412 538 - 111351968 I a score=38.000000 s hg38.chrUn_GL000218v1 19849 1 + 161147 c s panTro4.chr2A 18549004 1 - 113622374 t i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500398 1 - 123690457 c i nomLeu3.chr11 C 0 C 0 e calJac3.chr8 49635796 0 + 128169293 C e chlSab2.chr21 51241881 1 + 127223203 I e papAnu2.chr3 104174722 27 + 180432695 I e macFas5.chr3 114128312 27 + 192294377 I e rheMac3.chr3 120035837 1 + 198365852 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=9541.000000 s hg38.chrUn_GL000218v1 19850 37 + 161147 tactagcttctctctttccctacctggcagacagcct s panTro4.chr2A 18549005 37 - 113622374 tactagcttctctctttccctacctggcagacagcct i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500399 37 - 123690457 taccagcttctctcttttcccagcttgcagacagcct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120035838 26 + 198365852 -atgaatatatacataatccatgttta---------- i rheMac3.chr3 I 1 C 0 s chlSab2.chr21 51241882 26 + 127223203 -atgaatatatacataatccatgttta---------- i chlSab2.chr21 I 1 C 0 s calJac3.chr8 49635796 36 + 128169293 -accagcttctctctttccctagcttgcagaaagcct i calJac3.chr8 C 0 C 0 e papAnu2.chr3 104174722 27 + 180432695 I e macFas5.chr3 114128312 27 + 192294377 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=283606.000000 s hg38.chrUn_GL000218v1 19887 144 + 161147 attgtgggact--gccttctaaccgtgtgaacctattctctctggtaaactcccttatacatatacgtgtatcttgttggatctgtccctctggagaaccctaactaatacaTTTTGTTTATTTTTTCTCCACTGCCCTTTCCTCT s panTro4.chr2A 18549042 142 - 113622374 gttgtgggactttaccttgtaactgtgtgagccaattctctctcgtaaactcccttatacatatacgtgtatcctggtggttctgtccctctggagaaccctgactaataGATTTT----ATTTTTTCTCCGCTGCCCTTTCCTCC i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500436 142 - 123690457 attgtgggactttgccttgtaatcgtgtgagccaattctctctaataaactccgttttatatatatatgtatccgattggttctgtccctctggagaacc----ctaatacaTCTTGTTTATTTTTTCTCTGCTGCCCTTTACTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120035864 142 + 198365852 agtgtgggactttggcttgtaatcgtgtgagacaattctctctaataaactcccttttacatatatgtgtatcctattggttctgatcctctggagaacc----ctaatacatcttgtttattttttctctgctgccttctccTCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128339 142 + 192294377 attgtgggactttgccttgtaatcgtgtgagacaattctctctaataaactcccttttacatatatgtgtatcctattggttctgatcctctggagaacc----ctaaTACATCTTGTTTATTTTTTCTCTGCTGCCTTCTCCTCT i macFas5.chr3 I 27 C 0 s papAnu2.chr3 104174749 139 + 180432695 attgtgggactttgccttgTAATCGTGTGAGACAATTCTctctaataaactcccttttacatatatgtgtatcctattggttctgatcctctggagaacc----ctaatacatcttgtttattttttctccgCTGCCTTCTCC--- i papAnu2.chr3 I 27 C 0 s chlSab2.chr21 51241908 142 + 127223203 attgtgggactttgccttgtaattgtgtgagacaattctctctaataaactcccttttacatatatgtgtatcctattggttctgatcctctggagaacc----ctaaTACATCTTGTTTATTTTTTCTCCGCTGCCTTTTCCTCT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49635832 141 + 128169293 actgtgggcctttgccttgcaatcgtgtgagccaat--tctctaataaacttccttttacatatacgtgtatcctattggttctgtccctctggagaaccctgactaatacaTCCTGT---TTTTTCCTCCGCTTCCCTTTCATCT i calJac3.chr8 C 0 C 0 e gorGor3.chr2A 18845412 538 - 111351968 I a score=-5790.000000 s hg38.chrUn_GL000218v1 20031 1 + 161147 -G s panTro4.chr2A 18549184 1 - 113622374 -T i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500578 1 - 123690457 -T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036006 1 + 198365852 -T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128481 1 + 192294377 -T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174888 1 + 180432695 -T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242050 1 + 127223203 -T i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49635973 1 + 128169293 A- i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6180486 1 - 58292249 G- i saiBol1.JH378107 N 0 I 4656 e gorGor3.chr2A 18845412 538 - 111351968 I a score=1302.000000 s hg38.chrUn_GL000218v1 20032 1 + 161147 A s panTro4.chr2A 18549185 1 - 113622374 C i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500579 1 - 123690457 C i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036007 1 + 198365852 C i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128482 1 + 192294377 C i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174889 1 + 180432695 C i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242051 1 + 127223203 C i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49635974 1 + 128169293 C i calJac3.chr8 C 0 C 0 e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=9176.000000 s hg38.chrUn_GL000218v1 20033 3 + 161147 TTC s panTro4.chr2A 18549186 3 - 113622374 TTC i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500580 3 - 123690457 TTC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036008 3 + 198365852 TTC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128483 3 + 192294377 TTC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174890 3 + 180432695 TTC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242052 3 + 127223203 TTC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49635975 3 + 128169293 TTC i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 117383 3 - 319779 CTC i micMur1.scaffold_1595 N 0 I 58 e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=115549.000000 s hg38.chrUn_GL000218v1 20036 57 + 161147 TAGGCTTACCTAGACCACCACCATTCTTTCCCCCT------TTCTAAAGTAAAAGTTGTTTTT s panTro4.chr2A 18549189 57 - 113622374 TAGGCTTACCTAGACCACCACCATTCTTTCCCCTT------TTCTAAAGTAAAAGTTGTTTTT i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500583 62 - 123690457 TAGGCTTACCTAGACTACCACCATTCCTTCCCCCTTTCCTATTCTAAAGTAAAAGTTG-TTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036011 62 + 198365852 TAGGCTTACCTAGACCACCACCATTCCTTCCCCCTTTCCTATTCTAAAGTAAAAGTTG-TTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128486 62 + 192294377 TAGGCTTACCTAGACCACCACCATTCCTTCCCCCTTTCCTATTCTAAAGTAAAAGTTG-TTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174893 62 + 180432695 TAGGCTTACCTAGACCACCACCATTCCTTCCCCCTTTCCTATTCTAAagtaaaagttg-tttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242055 62 + 127223203 TAGGCTTACCTAGACCACCATCATTCCTTCCCCCTTTCCTATTCTAAAGTAAAAGTTG-TTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49635978 47 + 128169293 TACATTTACCCAGACCACCAGCATTCCTTCTCTCTTTCCTGTTCTAA---------------- i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117386 58 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=2548.000000 s hg38.chrUn_GL000218v1 20093 1 + 161147 T s panTro4.chr2A 18549246 1 - 113622374 T i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500645 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036073 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128548 1 + 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174955 1 + 180432695 t i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242117 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s micMur1.scaffold_1595 117444 1 - 319779 T i micMur1.scaffold_1595 I 58 I 496 e saiBol1.JH378107 6180487 4656 - 58292249 I e calJac3.chr8 49636025 0 + 128169293 C e gorGor3.chr2A 18845412 538 - 111351968 I a score=891139.000000 s hg38.chrUn_GL000218v1 20094 400 + 161147 TCTCACTAAATGCATGGTATTCTGCCCATTTTCCATGGCTTCCCTCAGCCCTGCTCTGTTTA---TTCTTGCTATCTTAAGAGGAAATCCCTGCCTCTTCCGTGGCTTTTCCCACTTGGTCTACTTACTGGTTTCTGTTGTTCTCAGAGACACACTGAGACCTTTCACATCTCACTGTCACTTCTTGGAAGGGCTCTCT--ACCTCGTCTGCCTGCTAAGCAA-------CCTCTTGGGGAGATGTGGGCACTCCTGAGTCACTGAACTTGAGCTATTTGGTGTTGGTATGTTAATTTATCTTCTTAGACCACTTACCACTTCCTTAACTTCAAAAGAGAAGAATAAGTATTATTTTCCATGGTCGATATGAAGAGTAGAAATAACTTATACAAAATGCATTGCAGTTAAGT s panTro4.chr2A 18549247 402 - 113622374 TCTTGCTAAATGCATGGTATTCTGCCTGTTTTCCATGACTTCCTTCAGCCCTGCTCTGTTTA---TTCTTGCTCTCTTAAGAGGAAATCCCTGCCTCTTCTGTGGCTTTTCCCTCTTGGTCTACGTACTGCTTTCTATTGTTCTCAGAGGCACACTGAGACCTTTTACATCTCACTGTCACTTCTTGGAAGGGCTCTCTCTACCTCGTCTGCCTGCTGAGCAA-------CCTCTTGGGGAGACACGGGCACTCTTGAGTCACTGAACTTGGGCTGTTTGGTGTTGGTATGTTAATTTATCTTCTTAGACCACTTACCACTTCCTTAACTTGAAAAGAGAAGAATAATTATTTTTTTCCATGGTTGATATGAAGAGTAGAAATAACTTATACAAAATGCATTGCAGTTAAGT i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94500646 403 - 123690457 TCTCGCTTAATGCATGGTATTCTGCCCATTTCCCATGGCTTCCTTCAGTCCTGCTCTGTTTATTCTTCTTGCTCTCTTAAGAGGAAATTCCTGCCTCTTCCTTGGCTTTTTCCACTTGGTCTACGTACTGGTTTCTGTTGTTCTTAGAGACACACTGAGACGTTTCACGTCTCACTGCCACTTCTTGGAAGGGCTCTCTCTACCTGGTCAGCCTGCTGAGCAA-------CCTCTTGGGGCTACACGGGCAATCCTGAGTTATCGATCTTGAGCTGTTTGGTGTTGGCATGTTAATTTATCTTCTTACACCACTTACCACTTCCTTAATGTCAAAAGATAAGAATAATTATTATTTTCCATGGTTGATGTGAAGAGTACAAATAAC--ATACAAAATGCATTGCAGTTAGGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036074 405 + 198365852 TCTCACTTAATGCATGGTATTCTGCCCATCTCCCATGGCTTCCCTCAGTCCTGCTCTGTTTATTTTTCTTGCTCTCTTAAGAGGAAATTCCTGCCTCTTCCTTGGCTTTTTCCAATTGGTCTACGTACTGGTTTCTGTTGTTCTCAGAGACACACTGAGACGTTTCACGTCTCACTGTCACTTCTTAGAAGGGCTCTCTCTACCTGGTCTGCCTGCCGAGCAA-------CCTCTTGgggagacatgggtactcctgagtcattgaacttgagctgtttggtgttggcatgttaatttatcttcttacaccacttcccacttccttaacgtcaaaagacaagaataattattattttccatggttgatgtgaagagtacaaataacttatacaaaatgcattgcaGTTAGGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128549 405 + 192294377 TCTCACTTAATGCATGGTATTCTGCCCATCTCCCATGGCTTCCCTCAGTCCTGCTCTGTTTATTTTTCTTGCTCTCTTAAGAGGAAATTCCTGCCTCTTCCTTGGCTTTTTCCAATTGGTCTACGTACTGGTTTCTGTTGTTCTCAGAGACACACTGAGACGTTTCACGTCTCACTGTCACTTCTTAGAAGGGCTCTCTCTACCTGGTCTGCCTGCCGAGCAA-------CCTCTTGGGGAGACATGGGTACTCCTGAGTCATTGAACTTGAGCTGTTTGGTGTTGGCATGTTAATTTATCTTCTTACACCACTTCCCACTTCCTTAACGTCAAAAGACAAGAATAATTATTATTTTCCATGGTTGATGTGAAGAGTACAAATAACTTATACAAAATGCATTGCAGTTAGGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104174956 405 + 180432695 tctcaCTTAATGCATGGTATTCTGCCCATTTCCCATGGCTTCCCTCAGTCctgctctgtttatttttcttgctctctTAAGAGGAAATTCCTGCCTCTTCCTTGGCTTTTTCCAATTGGTCTACGTACTGGTTTCTGTTGTTCTCAGAGACACACTGAGACGTTTCACGTCTCACTGTCACTTCTTAGAAGGGCTCTCTCTACCCGGTCTGCCTGCTGAGCAA-------CCTCTTGGGGAGACATGGGTACTCCTGAGTCATTGAACTTGAGCTGTTTGGTGTTGGCATGTTAATTTATCTTGTTACACCACTTCCCACTTCCTTAACGTCAAAAGAtaagaataattattattttccatgGTTGATGTGAAGAGTACAAATAACTTATACAAAACGCATTGCAGTTAGGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242118 404 + 127223203 TCTCACTTAATGCGTGGTATTCTGCCCATTTCCCATGGCTTCCCTCAGTCCTGCTCTGTTTATTTTTCTTGCTCTCTTAAGAGGAAATTCCTGCCTCTTCCTTGGCTTTTTCCAATTGGTCTACGTACTGGTTTCTGTTGTTCTTAGAGACACACTGAGATGTTTCATGTCTCACTGTCACTTCTTAGAAGGGCTCTCTCTACCTGATCTGCCTGCTGAGCAA-------CCTCTTGCGGAGACATGGGTACTCCTGAGTCATTGAACCTGAGCTGTTTGGTGTTGGCATGTTAATTTATCTTCTTACACCACTTCCCACTTCCTTAACATCAAAAGACAAGAATAATTATTATTTTCCATGGTTGATGTGAAGAGTACAAATAACTTACACAAAATGTATTGC-GTTAGGA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49636025 393 + 128169293 -----------GCATGGTATTCTGCCCATTTCCCATGGCTTCCCACAGTCCTGCTCTGTTTATGCTTCTTGTTCTCTTAAGAGGAAATCCTTGCCTTTTCCTTGGCTTTTTCTACTTGGTCTACATACTGGTTTCTGCTTTTCTCAGAGACACACCGTGACCTTTCATGTCTCACTGTCACTTCTTGGAAGGGTACTCTCTACTGGGTCTGCCTGCTgagcagacagacctctcttggggaaacatgggcactcctgagtcactgaatgtgagctgtttggtgttggtctgttaatttatcttcttaca-------ccacttccttaactccaaaagg-aataataattattattttccatgattgatgtgaaaagtataaataacttatacgaaatgcattgcaGTTAGGA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117445 496 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=1094.000000 s hg38.chrUn_GL000218v1 20494 3 + 161147 GAT- s panTro4.chr2A 18549649 3 - 113622374 GAT- i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501049 3 - 123690457 GAT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036479 3 + 198365852 GAG- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114128954 3 + 192294377 GAG- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104175361 3 + 180432695 GAG- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242522 3 + 127223203 GAG- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49636418 3 + 128169293 GAT- i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 117941 3 - 319779 -act i micMur1.scaffold_1595 I 496 I 4183 e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=846875.000000 s hg38.chrUn_GL000218v1 20497 386 + 161147 AATAAATGGCCGTGAATGCCCTTAATAATGTTATTCTATCAGTCTCAGCTCAGATACCAtctgctttgtgagctctgctctgaatcatatctgcttcttctctgggtttcttgtgctctgttctTAACTACTTTAAAGCAGTAATTGTTCTGATTCTAATTAGTGATCCTTCCCAATAAAATTTTAATTTCGTAGATCTCTTCCCCCCACCCCTGCCCCAGCCTAACCAGTGTTTTCTTAC-------------TTTTTTGTGTACAGGCTACATCACTGGTCTTCTTTTATTTGTGGCTAAATAAATGTTGTGTTAGAAGAGTAAAGAGTTCCCAGTTACATGGGATCTATAGTTCTACAAAATGAATATATACATAATCCATGTAAATatttcac-----------------------------------------------tt- s panTro4.chr2A 18549652 385 - 113622374 GATAAATGGCCATGAATGCCCTTATTAATGTTATTCTATCAGCCTCAGCTCAGATACCATTTGCTCTGTGAGCTCTGCTCTGAATCATATCTGCTTCTTCTCTGGGTTCCTTGTGCTCTGTTCTTAACTACTTTAAAGCAGTAATTGTTCTGATTCTAATTAGTGATCCTTCCCAATAAAATTTTAATTTTGTAGATCTCTTCCCCCCACCCCTGCCCCAGCCTAACCAGTGTTTTCTTA--------------TTTTTTGTGTACAGGCTATATCACTGGTCTTCTTTTATTTGTGGCTAAATAAATGTTGTGTTGGAAGAGTAAAGAGTTCCCAGTTCCATGGGATCTATAGTTCTACAAAATGAATATATACATAATCCATGTAAATATTTCAC-----------------------------------------------TT- i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501052 391 - 123690457 AATAAATGGCAGTGAATGCCCTTATTAATGTTATTCTATCAGTCTCAGCTGAGATACCATCTGCTCTGTTAGCTCGACTCTGAATCATATTTAGTTCTTCCCTGGGTTCGTTGTGCTCTATTCTTAAATGCTGTAAAACAGTAATTATTCTGATTCTAATTAGTGGTCCTTCCCAGTAAAATTTTAATTTTTTAGATCTCTTTCCCCCACCCCTGCCCCAGCCTTAGCAGTATTTTCTTACTTC--------TTTTTTGTGTGTACAGGCTAAATCACTGGTCTTCTTTTATTTGTGGCTAAATAAATGTTTTGCTGGAAGAGTAAAGAGTTCCCAGTTCCATGAGATCTATAGTTTTACAAAATGAATATATACATAATCCATGTAAATATTTCAC-----------------------------------------------TT- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120036482 391 + 198365852 AATAAATGGCAGTGAATGCCCTTATTAATGTTATTCTATCAGTATCAGCTCAGATACCATCTGTTCTGTGTGCTCGACTCTGAATCATATCTAGTTCTTCCCTGGGTTCAGTGTGCTCTTTTCTTAACTGCTTTAAAACAGTAATTATTCTGATTCTAATTAGTGATCCTTCCCAGTAAAATTTTACGTTTTTAGATCTCTTTCTCCCACCCCTGCCCCAGCCTTAGCAGTATTTTCTTATTTC--------TTTTTTGTGGGTACAGGTTAAATCACTGGTCTTCTTTTACTTGTGGCTAAATAAATGTTTTGCTGGAAGAGTAAAGAGTTCCCAGTTCCATGAGATCTATAGTTCTACAAAATGAATATACACATAATCCATGTAAATATTTCAC-----------------------------------------------tt- i rheMac3.chr3 C 0 I 2286 s macFas5.chr3 114128957 391 + 192294377 AATAAATGGCAGTGAATGCCCTTATTAATGTTATTCTATCAGTATCAGCTCAGATACCATCTGTTCTGTGTGCTCGACTCTGAATCATATCTAGTTCTTCCCTGGGTTCAGTGTGCTCTTTTCTTAACTGCTTTAAAACAGTAATTATTCTGATTCTAATTAGTGATCCTTCCCAGTAAAATTTTACGTTTTTAGATCTCTTTCTCCCACCCCTGCCCCAGCCTTAGCAGTATTTTCTTATTTC--------TTTTTTGTGGGTACAGGTTAAATCACTGGTCTTCTTTTACTTGTGGCTAAATAAATGTTTTGCTGGAAGAGTAAAGAGTTCCCAGTTCCATGAGATCTATAGTTCTACAAAATGAATATACACATAATCCATGTAAATATTTCAC-----------------------------------------------TT- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104175364 391 + 180432695 AATAAATGGCAGTGAATGCCCTTATTAATGTTATTCTATCAGTATCAGCTCAGATACCATCTGTTCTGTGTGCTCGACTCTGAATCATATCTAGTTCTTCCCTGGGTTCAGTGTGCTCTTTTCTTAACTGCTTTAAAACAGTAATTATTCTGATTCTAATTAGTGATCCTTCTcagtaaaattttatgtttttagatctctttctcccacccctgccccagccttagcagtattttcttatttc--------ttttttgtgggtACAGGTTAAATCACTGGTCTTCTTTTACTTGTGGCTAAATAAATGTTTTGCTGGAAGAGTAAAGAGTTCCCAGTTCCATGAGATCTATAGTTCTACAAAATGAATATACACATAATCCatgtaaatatttcac-----------------------------------------------tt- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51242525 391 + 127223203 AATAAATGGCAGTGAATGCCCTTATTAATGTTATTCTATCAGTATCAGCTCAGATACCATCTGTTCTGTGTGCTCGACTCTGAATCGTATCTAGTTCTTCCCCGGGTTCATTGTGATCTATTCTTAACTGCTTTAAAACAGTAATTATTCTGATTCTAATTAGTGATCCTTCCCAGTAAAATTTTAATTTTTTAGATCTCTTTCTCCCACCCCTGCCCCAGCCTTAGCAGTATTTTCTTAGTTC--------TTTTTTGTGGGTATAGGTTAAATCACTGGTCATCTTTTATTTGTGGCTAAATAAATGTTTTGCTGGAAAAGTAAAGAGTTCCCAGTTCCATGAGATCTATAGTTCTACAAAATGAATATACACATAATCCATGTAAATATTTCAC-----------------------------------------------TT- i chlSab2.chr21 C 0 I 2273 s calJac3.chr8 49636421 443 + 128169293 AATAATCAGCAGTGAATGCCCTTATTAATGTTACTCTATCAGTCTTGGCTCAGATACCATCTGCTCTGTTAGCTCCACTCTGAATTGTATCTAGTTCTTCTCTGGGTTCGTTGTGCTCTATTCTTAACTGCTTTAAAGCAGTAATTATTCTGATTCTAATTAGTGGTCCTTCTCAGTAAATTTTTAATTTTTTAGATTTCTTCCCCCCACCCTGCCCCCAGCCTTACCACT-TTTTCTTGTTTCGCGTGTCTGTGTGTGTGTGTGTAGGCTGAATCACTGGTCTTC---TATTTGTGGCTAAATAAATATTTTGTTGGAAGAGTAAAGAGTTCCCAGTTCCATGGGATCTACAGTTCTATAAAATGAATATATACATATTCCATGTAAATATTTCACAACAATAATTTCACTACTAAAATTGTGAAATAGTAGTGAAACAATATTTC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=-4381.000000 s hg38.chrUn_GL000218v1 20883 7 + 161147 --------------------------------------attttga s panTro4.chr2A 18550037 6 - 113622374 ---------------------------------------TTTAGA i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501443 6 - 123690457 ---------------------------------------TTAAAA i nomLeu3.chr11 C 0 C 0 s macFas5.chr3 114129348 6 + 192294377 ---------------------------------------TTAAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104175755 6 + 180432695 ---------------------------------------ttaaaa i papAnu2.chr3 C 0 C 0 s calJac3.chr8 49636864 45 + 128169293 ATTACAATAATTTTACTACTAAAATTGTGAAATTTAATAGTGAAA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e chlSab2.chr21 51242916 2273 + 127223203 I e rheMac3.chr3 120036873 2286 + 198365852 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=2671.000000 s hg38.chrUn_GL000218v1 20890 4 + 161147 -caaa s panTro4.chr2A 18550043 4 - 113622374 -CAAT i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501449 4 - 123690457 -CAAT i nomLeu3.chr11 C 0 C 0 s macFas5.chr3 114129354 4 + 192294377 -CAAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104175761 4 + 180432695 -caat i papAnu2.chr3 C 0 C 0 s calJac3.chr8 49636909 4 + 128169293 -CAAT i calJac3.chr8 C 0 C 0 s tarSyr2.KE940243v1 9919 4 + 445202 CTAA- i tarSyr2.KE940243v1 N 0 I 7255 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e chlSab2.chr21 51242916 2273 + 127223203 I e rheMac3.chr3 120036873 2286 + 198365852 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=75566.000000 s hg38.chrUn_GL000218v1 20894 114 + 161147 ttttaattttt-aaa-----------------------ttaaatttaatttGTTCATGTGTGTGAGACCAGAGTGAGAACAGAGATGGCGGCGGT---Gagg-ggcggtggtctcaccatgttgcccaggctggtcttgaac s panTro4.chr2A 18550047 111 - 113622374 TTTTTAATTTT----------------------------TAAATGTAATTTGTGCATGTTTGTATGTT---AGTGAGACCAAAGATGGTGGCGGCAGGGAGGAGGGGggggtctcaccatgttgcccaggctggtcttgaac i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501453 104 - 123690457 TTTTAAATTTTTAGA-----------------------TAAAATTTAATTTGTGCGCATGTGTATGTG---TGTGAGACCAGAGATGG----------GAG--TGGGgggatctcactatgttgagcaggctggtcttgaac i nomLeu3.chr11 C 0 C 0 s macFas5.chr3 114129358 113 + 192294377 TTTTAAATATTTAGA-----------------------TAAAATTTAATTTGTGCATGTGTGTATGTG---TGTGAGACCAGAGATGGCGCGGCG---GGGGTGGGGggggtctcactatgttgagcaggctagtcttgaac i macFas5.chr3 C 0 I 2163 s papAnu2.chr3 104175765 106 + 180432695 ttttaaatatttaga-----------------------taaaatttaatttgtgcatgtgtgtatgtg---tgggagaCCAGAGATGGCGcgg----------ggggggggtctcactatgttgagtaggctagtcttgaac i papAnu2.chr3 C 0 I 2137 s calJac3.chr8 49636913 125 + 128169293 ATTTCACTACTAAAATTGTTTTAAAATTAAAACACTTTTAAAATTTAATTTGTGTGTGTGTGTATGTG---TGTTAGACCAGAGATTG----------G----GGGGTgggtctcactatgtttcccaggctggtcttgaac i calJac3.chr8 C 0 I 2310 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e chlSab2.chr21 51242916 2273 + 127223203 I e rheMac3.chr3 120036873 2286 + 198365852 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=10031.000000 s hg38.chrUn_GL000218v1 21008 4 + 161147 tccc s panTro4.chr2A 18550158 4 - 113622374 tccc i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94501557 4 - 123690457 tcct i nomLeu3.chr11 C 0 I 2355 s rheMac3.chr3 120039159 4 + 198365852 TCCC i rheMac3.chr3 I 2286 C 0 s macFas5.chr3 114131634 4 + 192294377 TCCC i macFas5.chr3 I 2163 C 0 s papAnu2.chr3 104178008 4 + 180432695 tccc i papAnu2.chr3 I 2137 C 0 s chlSab2.chr21 51245189 4 + 127223203 TCCC i chlSab2.chr21 I 2273 C 0 s calJac3.chr8 49639348 4 + 128169293 TCCC i calJac3.chr8 I 2310 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=261354.000000 s hg38.chrUn_GL000218v1 21012 130 + 161147 cttcaagtgcccccctcctcacctggccccccTCACCTTGCCTCCTCCCCTCTCACTCCTATGCCAGCCCCTGCCATTCCCCACCCC-CTCTGTAGACTGCAAGACTCAACAAGTGACTTGCTGAGCAAAC s panTro4.chr2A 18550162 130 - 113622374 cttcaactgctcccctcctcacctggccccccTCACCTTGCCTCCTCCCCTCTCACTCCTATGCCAGCCCCTGCCATTCCCCACCCC-CTCTGTAGACTGCAAGACTCAACAAGTGACTTGCTGAGCAAAG i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94503916 125 - 123690457 CTTCAACTGCCCCCCTCCTCACCTGG-ACCCCTCACCTT-CCTCCTCCCCTCTCACCCC---GCCATCCCC-ACCAGTCCCCACCCCTCTCTGTAGACTGCAAGACTCAGCAAGTGACTTGCTGAGCAAAC i nomLeu3.chr11 I 2355 C 0 s rheMac3.chr3 120039163 125 + 198365852 CTTCAACTGCCCCCGTCCTCACCTGG-ACCCCTCACCTT-CCTCCTCCCCTCTCACCCC---GCCACCCCT-GCCAGTTCCCACCCCTCTCTGTAGACTGCAAGACTTAACAAGTGACTTGCTGAGCAAAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114131638 125 + 192294377 CTTCAACTGCCCCCGTCCTCACCTGG-ACCCCTCACCTT-CCTCCTCCCCTCTCACCCC---GCCACCCCT-GCCAGTTCCCACCCCTCTCTGTAGACTGCAAGACTTAACAAGTGACTTGCTGAGCAAAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104178012 125 + 180432695 cttcaactgcccccgtcctcacctgg-acccctcacctt-cctcctcccctctcacccc---gccacccct-gccagtccccacccctctcTGTAGACTGCAAGACTTAACAAGTGACTTGCTGAGCAAAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51245193 125 + 127223203 CTTCAACTGCCCCCGTCCTCACCTGG-ACCCCTCACCTT-CCTCCTTTCCTCTCACCCC---ACCACCCCT-GCCAGTCCCCACCCCTCTCTGTAGACTGCAAGACTTAACAAGTGACTTGCTGAGCAAAC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49639352 124 + 128169293 TTTCAACTGCCCTGCTcctcacctggcctccctcaccatgcctcctcccctctcacccc---atctcccct--ccagtcaccacgc--ctcTGTAGACTGCAAGACTTGACAAGTGACTTGCTGAGCAAAC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=6152.000000 s hg38.chrUn_GL000218v1 21142 2 + 161147 CC s panTro4.chr2A 18550292 2 - 113622374 CC i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504041 2 - 123690457 CC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039288 2 + 198365852 CC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114131763 2 + 192294377 CC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104178137 2 + 180432695 CC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51245318 2 + 127223203 CC i chlSab2.chr21 C 0 C 0 s rhiRox1.KN296879v1 1535057 2 - 1560628 CC i rhiRox1.KN296879v1 N 0 I 1104 s calJac3.chr8 49639476 2 + 128169293 TC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I a score=216780.000000 s hg38.chrUn_GL000218v1 21144 96 + 161147 TGCTGAGAAGAGGTCTGTTTAGGGACACAGGAGGCCAAGTACACAAAAAAGCAAAAGAACTAGCATGCCTTTTTCAATGGATGTCTATTTTACAGG s panTro4.chr2A 18550294 96 - 113622374 TGCCGAGAAGAGGTCTGTTTAGGGACACGGGAGGCCAAGTACACAAAAAGGCAAAAGAACTAGCATGCCTTTTTCAATGGATGTCTGTTTTACAGG i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504043 95 - 123690457 TGCCGAGAAGAGGTCTATTTAGGGACACAGGCGGCCAAGTACAGAAAAAGGCAAAAGAACTAGCATGCCTTTTTCAATGGATGTC-ATTTTGCAGG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039290 95 + 198365852 TGCCGAGAAGAGGTCTGTTTAGGGACACAGGCGGCCAAGTACAGAAAAAGGTAGAAGAACTAGCGTGCCTTTTTTAGTGGATGTC-ATTTTACAGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114131765 95 + 192294377 TGCCGAGAAGAGGTCTGTTTAGGGACACAGGCGGCCAAGTACAGAAAAAGGTAGAAGAACTAGCGTGCCTTTTTTAGTGGATGTC-ATTTTACAGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104178139 95 + 180432695 TGCCGAGAAGAGGTCTGTTTAGGGACACAGGCGGCCAAGTACAGAAAAAGGTAGAAGAACTAGCGTGCCTTTTTCAGTGGATGTC-ATTTTACAGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51245320 95 + 127223203 TGCCGAGAAGAGGTCTGTTTAGGGACACAGGCGGCCAAGTACAGAAAAAGGCAGAAGAAGTAGCGTGCCTTTTTCAGTGGATGTC-ATTTTACAGG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49639478 96 + 128169293 GGCCGAGAGGCAGTCTGTTTAGGGACACAGAAGGCCAAGTACAGAAAAAGGCAAAAGGACTAGCATGCCTGTTTCAATGGATGTCTATTTTACAGG i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 117944 4183 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=3600.000000 s hg38.chrUn_GL000218v1 21240 1 + 161147 G s panTro4.chr2A 18550390 1 - 113622374 G i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504138 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039385 1 + 198365852 G i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114131860 1 + 192294377 G i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104178234 1 + 180432695 G i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51245415 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49639574 1 + 128169293 G i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 122127 1 - 319779 G i micMur1.scaffold_1595 I 4183 I 1236 e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=279540.000000 s hg38.chrUn_GL000218v1 21241 129 + 161147 CTGGCTTCAGATTATTGTTATAGCTTTAAAT-AAAAGGACCGTTTTGTCATCTTGGCCCATGACCTAC-TTATTTCTTTACTGTCCATTGCCCTGGACGCTTGACTAATAATTTAACAGCAG---T-----TTTTTTTT s panTro4.chr2A 18550391 130 - 113622374 CTGGCTTCAGATTGTTGTTATAGCTTTAAAT-AAAAGGACCGTTTTGTCATCTCAGCCCGTGGCCTACATTATTTCTTTACTGTCCATTGCCCTGGGCGCTTGACTAATAATTTAACAGCaa---t-----tttttttt i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504139 132 - 123690457 CTGGCTTCAGATGATTGTTATAGCTTTAAATAAAAAGGACAGTTT--TCATCTCGGCCCGTGGCCTACATTATTTCTTTACTGTCCATTGCCCTGGGCGCTTGACTAATAATTTAACAGCAGTTTT-----TTTTTTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039386 128 + 198365852 CTGGCTTCAGATGATTGTTATAGCTTTAAAT-AAAAGGACAGTTT--TCTTCTCGGCCGTTGGCCTACATTATTTCTTTACTGTCCATTGCCCTGGGCGCTTGACTAATAATTTAACAGCAG---t-----tttttttt i rheMac3.chr3 C 0 I 5 s macFas5.chr3 114131861 131 + 192294377 CTGGCTTCAGATGATTGTTATAGCTTTAAAT-AAAAGGACAGTTT--TCTTCTCGGCCGTTGGCCTACATTATTTCTTTACTGTCCATTGCCCTGGGCGCTTGACTAATAATTTAACAGCAGtttt-----tttttttt i macFas5.chr3 C 0 I 5 s papAnu2.chr3 104178235 131 + 180432695 CTGGCTTCAGATGATTGTTATAGCTTTAAAT-AAAAGGACAGTTT--TCTTCTCGGCCGTTGGCCTACATTATTTCTTTACTGTCCATTGCCCTGGGCGCTTGACTAATAATTTAacagcagtttt-----tttgtttt i papAnu2.chr3 C 0 I 6 s chlSab2.chr21 51245416 136 + 127223203 CTGGCTTCAGATGATTGTTACAGCTTTAAAT-AAAAGGACAGTTT--TCTTCTCGGCCGGTGGCCTACATTATTTCTTCACTGTCCATTGCCCTGGGCACTTGACTAATAATTTAACAGCAGTTTTGTTTGTTTGTTTG i chlSab2.chr21 C 0 I 6 s calJac3.chr8 49639575 128 + 128169293 CTGACTTCAGGTTATTGTTAAAGCTTTAAAT-AAAAGGACAGTTT--TCATCTCGGCCTGTGGCCTACATTATTTCTTTACTGTCCATTACTCTGGGCGCTTGGCTGATAATTTAACAGCAG---T-----GTTTTTTT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=-406.000000 s hg38.chrUn_GL000218v1 21370 2 + 161147 AA s panTro4.chr2A 18550521 2 - 113622374 ta i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504271 2 - 123690457 TT i nomLeu3.chr11 C 0 C 0 s calJac3.chr8 49639703 2 + 128169293 TT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e chlSab2.chr21 51245552 6 + 127223203 I e papAnu2.chr3 104178366 6 + 180432695 I e macFas5.chr3 114131992 5 + 192294377 I e rheMac3.chr3 120039514 5 + 198365852 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=729826.000000 s hg38.chrUn_GL000218v1 21372 331 + 161147 -----------AATTTTAAATCATGATTCATTGCATTGCTGTAAGAGTAATTAGAGGTAAAGTAGGGCTTGAAACTGCCTGTAGTTGGTTACTTACTGAGTTCTTAGCATAATTGTCAGGTGAGAGGTTGAAGTTTTAATTAGCGCTAAGTGGGATAGAAATTCAATGCACTGAAActgcagtgtccaattcagtaggcgctagccacttgtaactgttgaacacttggaatcctggctagtcctaattgagatgtgttgtgttaaatacactggatt---ttgtcattggagtgggaagaacagtgtagaatagctgcttgatttttttttatatttattac----at s panTro4.chr2A 18550523 331 - 113622374 -----------aattttaaatCATGATTCATTGCATTGCTGTAAGAGTAATCAGAGGTAAAGTGGGGCTTGAAACTGCCTGTAGTTGGTTACTTACTGAGATCTTAGCATAATTGTCAGGTGAGAGGGTGAAGTTTTAAGTAGCGCTAAGTGGGATAGAAATTCAGTGCACTGAAActgcagtgtccagttcagtaggcgctagccacctgtaagtgttgagcacttgaaatgctggctagtcctaactgagatgtgttgtgttaaatacactggatt---ttgtcgttggagtaggaagaacagtgtaaaatacctgcttgatgattttttatattgattac----at i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504273 334 - 123690457 -----------AATTTTAAATCATGATTCATAGCATTGCTGCAAGAGTAATTAGAGGTAAAGTAGGGCTTGAACCTGTCTGTAGTTGGTTACTTACTGAGATCTTAACATAAAAGTAAAGTGAGAGGGTGAAGTTGTAAGTAGCGCTAAGTGGAATAGAAATTAAACGCACTGAAActgccatgtccagttcggtaggcgctagccacctgtaactattgagcacttgaaatgctggctagtcc----tgagatgtattgtgttaaatacactggattttgttgttgttggagtagcaagaacagtgtaaaatatctgctcgatatttttttatattgattacatatat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039519 331 + 198365852 -----------aattttaaatCATGATTCATAGCATTGCTGTAAGAGTAATTAGAGGTAAAATAGGGCTTGAACTTGTCTGTAGTTGGTTACTTACTGACATCTTAACATAAAAGTAAGGTGAGAGGGTGAAGTTTTAAGTAACGTAAAGTGGAATAGAAATTAAATGCCCTGAAActgccatgtccggttcggtgggcgctagctacctgtagctgttgagcacttgaaatgctggctagtcctaattgaggtgtgttgtgttaaatacactggatt---ttgtcgttggagtaggaagaaccgtgtaaaatatctgcttgataattttttatattgattac----at i rheMac3.chr3 I 5 I 4 s macFas5.chr3 114131997 331 + 192294377 -----------aattttAAATCATGATTCATAGCATTGCTGTAAGAGTAATTAGAGGTAAAATAGGGCTTGAACTAGTCTGTAGTTGGTTACTTACTGACATCTTAACATAAAAGTAAGGTGAGAGGGTGAAGTTTTAAGTAACGTAAAGTGGAATAGAAATTAAATGCCCTGAAActgccatgtccggttcggtaggcgctagctacctgtagctgttgagcacttgaaatgctggctagtcctaattgaggtgtgttgtgttaaatacactggatt---ttgtcgttggagtaggaagaacagtgtaaaatatctgcttgataattttttatattgattac----at i macFas5.chr3 I 5 I 4 s papAnu2.chr3 104178372 331 + 180432695 -----------aattttaaatcatgaTTCATAGCATTGCTGTAAGAGTAATTAGAGGTAAAATAGGGCTTGAACTTGTCTGTAGTTGGTTACTTACTGACATCTTAACATAAAAGTAAGGTGAGAGGGTGAAGTTTTAAGTAACGTAAAGTGGAATAGAAATTAAATGCCCTGAAACTGCCATGTCCGGTTCGGTAGGCGCTAGCTACCTGTAGCTGTTGAGCCCTTGAAATGCTGGCTAGTCCTAATTGAGGTGTGTTGTGTTAAATACACTGGATT---TTGTCGTTGGAGTAGGAAGAACAGTGTAAAATATCTgcttgataattttttatattgattac----at i papAnu2.chr3 I 6 I 4 s chlSab2.chr21 51245558 331 + 127223203 -----------AATTTTAAATCATGATTCATAGCATTGCTGTAAGAGTAATTAGAGGTAAAATAGGGCTTGAACCTGTCTGTAGTTGGTTACTTACTGACATCTTAACATAAAAGTAAGGTGAGAGGGTGAAGTTTTAAGTAACATAAAGTGGAATAGAAATTAAATGCCCTGAAActgccatgtccggttcggtaggcgctagctacctgtagctgttgagcacttgaaatgctcgctagtcctcattgaggtgtgttgtgttaaatatactggatt---ttgtcgttagagtaggaagaacagtgtagaatatctgcttgataattttttatattgattac----at i chlSab2.chr21 I 6 I 15 s calJac3.chr8 49639705 339 + 128169293 CTTTTTTCGTTTTTTGTAAATCGTGATTCATCGCATTACTGAAAGAGTAATTAGAGGTAAAGTAGGGCTTGAACCTTTCTATAGTTGGTTGCTTACTGAGATCTTAACATAAAAGTAAGTTGAGAGGGTGAAGTTTTAAGTAGCACTAAGTGGAATAGAAATGAAATGTACTGAAActgcagtgtccaattcggtaggcgctagccacctgtaactgttgagcacatgaaatgctggctggtccgaactgagatgtgttgtgttaaatacaatggatt---ttgtcgttggagtaggaagaacagtgtaaaata---gctcgataagtttttatattgattac----at i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=4502.000000 s hg38.chrUn_GL000218v1 21703 21 + 161147 gttaaaattatta---ctatgatt s panTro4.chr2A 18550854 24 - 113622374 gttaaaattattattactacgatt i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504607 11 - 123690457 gttaaaat-------------gtt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039854 11 + 198365852 gttaaaatgat------------- i rheMac3.chr3 I 4 C 0 s macFas5.chr3 114132332 11 + 192294377 gttaaaatgat------------- i macFas5.chr3 I 4 C 0 s papAnu2.chr3 104178707 11 + 180432695 GTTAAAATGAT------------- i papAnu2.chr3 I 4 C 0 s calJac3.chr8 49640044 11 + 128169293 gttaaagtgat------------- i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e chlSab2.chr21 51245889 15 + 127223203 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=1076398.000000 s hg38.chrUn_GL000218v1 21724 512 + 161147 actatttgggacatactgagttaagtatatttaaaattaatttcacctttt--cttttaatggggcttaccagtacatttaaaattacgtacgtggctcacatatttattggacagcacGTCTCTAGAAATTTAGGAAGAAATAAGAAAAATATTGAGAATAGGT---AGCGACAGTAGGAAGTTTGTCCTCC-TGTAAGACTGATTCCAATAAAACTAATAGGTGATAGTTTTAATTGGCTTTTTCCTACTAG-AAAAAGTAAGTGTACTTTACATGCCTCTTTGTTCTCCTTCTTTCCCCTTCAATTTAGTGGTTAGCATGTATTTACTACATCAGGCTTAAT------ATTCACTAAGCAGTGTTAAGAAGACTTAGGTAAATGATTCCCTGATGAACACACTTGATTTTCAAAGCACTTTCCTAACCCATTTTTAATAGGAATAGAGTCAAAGGTAGAAGGCTTATTAGTAGTCATCTCATTTAAATCTCATGGAATTTTCCCGCTAAATCTCAAAGTAAA s panTro4.chr2A 18550878 501 - 113622374 actatttgggacata-----ttaagtatatttaaaattaatttcaccttttttcttttaatggggcttactagtacatttaaaattacatatgcggctcacatatttattggacagcacAGCTCTAG---TTTAGGAAGAAATAAGAAAAA----GAGAATAGGT---AGGGGCAGTAGGAAGTTTGCCCTCT-TACAAGACTGATTCTAATAAAAATAATAGATGATAGTTCTAATTGGCTTTTTCCTACTAG-AAAAAGTAAGTGTACTTTACATGCCTCTTTGTTCTCCCTCTTTCCCCTTCAGTTTAGTGGTTAGCATGTATTTACTATATCAGGCTTAAT------ATTCACTAAGCAGTGTTAAGACGACTTAG-TAAATGATTCCCTGATGAACACACTTGATTTTCAAAGCACTTTCCTAACCCATTTTTAATTGGTATAGAGTCAAAGGCAGATGGCTTATTAGTAGTCATCTCATTTAAATCTCATGGAATTTTCCTGCTAAATCTCAAAGTAAA i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94504618 516 - 123690457 actatttggtacgtactgagttaagtttatttaaaattaatttcacctttt-tcttttaatggggc-tactagtatatttaaaattacatgtgtggctcacatatttattggacagcactgCTCTAGAAGTTTAGGAAGAAATAAGAAAAATATTGAGAACAGGT---AGCGGCAGTAGGAACTTTGCCCTCCTTATAAGACTGATTCCAATAAAAATAATAGGTTATAGTTTTAATTGGCTTTTTCCTACTAG-AAAAAATAAGTGTACTTTACATGCCTCTTTGTTCTCACT-TTTCCCCTCCAGTTTAGCGGTTAGAATGTATTTATTATAGCAGGATTAATACAGGGATTCACTAAGCAGCGCTAAGAAGACTTAGGTAAATGATTCCCTGATGACCACACTTGATTTTCAAAGCACTTTCCTAACCCGTTTTAAACTGATATAGAGTCAAAGGGAGATGGCTGATTAGTAGTCATCTCATTTAAATCTTATGGAATTTTTCCAGTAAATCTCAAA-TAA- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120039865 513 + 198365852 actatttgggacatattgagttaagtatatttaaaattaatttcacctttt-tcttttaatggggc-tactagtatatttaacattacatacgtggctcacatatttattggacagcactgCTCTAGAAGTTTAAGAAGAAATAAGAAAAATATTGAGAACAGGT---TGCGGTAGTAGGAACTTTGCCCTTC-TATAAGACCGATTCCAATAAAAATAATAGGTTATAGTTTTAATTGGACTTTTCCTACTAG-AAAAAATAAGTGTACTTTACATGCCCCTTTGTTCTCCCTCTTTCCCCTCCAGTTTAGAGGTTAGCGTGTATTTATTATAGCAGGATTAATACAGGGATTCACTAAGCGGCGTTAAGAAAACTTAGGTAAATGATTCCCTGATGACCACACTTGATTTTCAAAGCACTTTCCTAACCCATTTTTAACTGGTATAGAGTCAAAGGCAGATGGCTTATTAGTAGTCATCTCATTTAAATCTTACGGAATTTTTCCAGTAAATCTCAAA----- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114132343 513 + 192294377 actatttgggacatattgagttaagtatatttaaaattaatttcacctttt-tcttttaatggggc-tactagtatatttaacattacatacgtggctcacatatttattggacagcactgCTCTAGAAGTTTAAGAAGAAATAAGAAAAATATTGAGAACAGGT---TGCGGTAGTAGGAACTTTGCCCTTC-TATAAGACCGATTCCAATAAAAATAATAGGTTATAGTTTTAATTGGACTTTTCCTACTAG-AAAAAATAAGTGTACTTTACATGCCCCTTTGTTCTCCCTCTTTCCCCTCCAGTTTAGAGGTTAGCGTGTATTTATTATAGCAGGATTAATACAGGGATTCACTAAGCGGTGTTAAGAAAACTTAGGTAAATGATTCCCTGATGACCACACTTGATTTTCAAAGCACTTTCCTAACCCATTTTTAACTGGTATAGAGTCAAAGGCAGATGGCTTATTAGTAGTCATCTCATTTAAATCTTACGGAATTTTTCCAGTAAATCTCAAA----- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104178718 513 + 180432695 ACTATTTGGGACATACTGagttaagtatatttaaaattaatttcacctttt-tcttttaatggggC-TACTAGTGTATTTAACATTACATACGTGGCTCACATATTTATTGGACAGCACTGCTCTAGAAgtttaagaagaaataagaaaaatattgagaACAGGT---TGCAGTAGTAGGAACTTTGCCCTTC-TATAAGACCgattccaataaaaataataggttATAGTTTTAATTGGACTTTTCCTACTAG-AAAAAATAAGTGTACTTTACATGCCCCTTtgttctccctctttcccctccagttTAGTGGTTAGCGTGTATTTATTATAGCAGGATTAATACAGGGATTCACTAAGCGGCGTTAAGAAAACTTAGGTAAATGATTCCCTGATGACCACACTtgattttcaaagcactttcctAACCCATTTTTAACTGGTATAGAGTCAAAGGCAGATGGCTTATTAGTAGTCATCTCATTTAAATCTTACGGAATTTTTCCAGTAAATCTCAAA----- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51245904 513 + 127223203 actatttgggacatattgagttaagtatatttaaaattaatttcacctgtt-tcttttaatggggc-tactagtatatttaacattacatacgtggctcacatatttattggacagcactgCTCTAGAAGTTTAAGAAGAAATAAGGAAAATATTGAGAACAGGT---CGCGGTAGTAGGAACTTTGCCCTCT-TATAAGACCGATTCCAATAAAAATAATAGGTTATAGTTTTAATTGGCCTTTTCCTACTAG-AAAAAATAAGTGTACTTTACATGCCCCTTTGTTCTCCCTCTTTCCCCTCCAGTTTAGTGGTTAGCATGTATTTATTATAGCAGGATTAATACAGGGATTCACTAAGCGGCATTAAGAAAACTTAGGTAAATGATTCCCTGACGACCACACTTGATTTTCAAAGCACTTTTATAACCCATTTTTAACTGGTATAGAGTCAAAGGCAGATGGCTTATTAGTAGTCATCTCATTGAAATCTTATGGAATTTTTCCAGTAAATCTCAAA----- i chlSab2.chr21 I 15 C 0 s calJac3.chr8 49640055 471 + 128169293 actatttgggatata-----ttaagtatgtttaaaattaatttcacctttt-tcttttaatggggc-tactagtatatttaaaattacatatgtggctcacataattattggatagcactgCTCTAGAAGTTTACGAAGAAAAAAGAAAAATATTGAGAACAGGTAGCAGCAGCAGTAGGAACTTTGCCCTCC-TCTAAGACTGATTCCAATAAAA--AATAAGTTATAGTTTTAATTGGCTTTTTCCCACTAGAAAAAAATAAGTGTACTTTACATGCCTCTTTGTTCTCCCCCTTTCCCCTCCAA-TTAGTGGTTAG----------------CAGGCTTAAT------ATTCAC-AAGCAGTGT--------------------ATTCTGTGATGACCACTTTTGATTTTCAAAGCGCTTTCCTAACCCATTTTTAATTGGTATATAGTCAAAGGCAGATGACTTATTAGTAGTCATCCCATTTAAATCTCGTGGAGTTTTCCCACTAAATCTGAAAGTAAA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1535059 1104 - 1560628 I a score=3514.000000 s hg38.chrUn_GL000218v1 22236 3 + 161147 CAA s rheMac3.chr3 120040378 3 + 198365852 TAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114132856 3 + 192294377 TAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179231 3 + 180432695 TAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246417 3 + 127223203 TAA i chlSab2.chr21 C 0 C 0 s rhiRox1.KN296879v1 1536163 3 - 1560628 CAA i rhiRox1.KN296879v1 I 1104 I 1446 s calJac3.chr8 49640526 3 + 128169293 GAA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e nomLeu3.chr11 94505134 0 - 123690457 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panTro4.chr2A 18551379 0 - 113622374 C a score=212182.000000 s hg38.chrUn_GL000218v1 22239 90 + 161147 TTTGTTA---------TAGGCTGTTTTGTCAAGTGTTTGGAAGGGACAGCATAAGACATGTGGTACTTCATTTCCAAATTGCTTGAGATGTTTTTCATT s panTro4.chr2A 18551379 90 - 113622374 TTTGTTA---------TAGGCTGTTTTGTCAAGTGTATGGAAGGGACAGCGTAGGACATGTGGTATTTCATTTCCAAATTGCTTGAGATGATTTTCATT i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505134 99 - 123690457 TTTGTTAAAGGCTATTTGGGCTATTTGGCCAAGTGCATGGAAGGGACAGCATAGGACCTGTGGTACTTCATTTCCAAATTGCTTGAGATGATTTTCATT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040381 99 + 198365852 TTTGTTGTAGGCTATTTGGGCTATTTGGTCAAGTGCATGGAAGGGACAGCATAGGACATGTGGTACTTCATTTCCAAATGGCTTGAGATGATTTTCATT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114132859 99 + 192294377 TTTGTTGTAGGCTATTTGGGCTATTTGGTCAAGTGCATGGAAGGGACAGCATAGGACATGTGGTACTTCATTTCCAAATTGCTTGAGATGATTTTCATT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179234 99 + 180432695 TTTGTTGTAGGCTATTTGGGCTATTTGGTCAAGTGCATGGAAGGGACAGCATAGGACATGTGGTACTTCATTTCCAAATTGCTTGAGATGATTTTCATT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246420 99 + 127223203 TTTGTTATAGGCTATTTGGGCTATTTGGTCAAGTGCATGGAAGGGACAGCATAGGACATGTGGTACTTCATTTCCAAATTGCTTGAGATGATTTTCATT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640529 90 + 128169293 TTTGTTA---------TAGGCTATTTGGTCAAGTGCATGGAAGGGACAGTGTAGGATGTGTGGCATTTCATTTCCAAATTGCTTGAGATGATTTTCATT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 122128 1236 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=17161.000000 s hg38.chrUn_GL000218v1 22329 10 + 161147 ATAATCATAC s panTro4.chr2A 18551469 10 - 113622374 ATAATCATAC i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505233 10 - 123690457 ATAACCATAT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040480 10 + 198365852 ATAACCATAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114132958 10 + 192294377 ATAACCATAT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179333 10 + 180432695 ATAACCATGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246519 10 + 127223203 ATAACCATAT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640619 10 + 128169293 ATAACCATGT i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 123364 3 - 319779 ---GTC---- i micMur1.scaffold_1595 I 1236 I 642 e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=375064.000000 s hg38.chrUn_GL000218v1 22339 167 + 161147 ATTATTTGCTTCTGGTTTTCCGGAAAAGCCAGCTAAGCCTGTGGTTCATTTAGATATAAATGAAA-TATCCTCAAAGGATTTCTCAAAGTGACTTATGCAACTTGAATATATATTTGTTCTGTAGGGTGTTTATTCCAAATTACCTGGCCATTTGCTGCAATTTGCAG s panTro4.chr2A 18551479 167 - 113622374 ATTATTTGCTTCTGGTTTTCCGGAAAAGCCAGCTAAACCTGTGGTTCATTTAGATATAAATGAAA-TATCCTCAAAGGATTGCACAAAGTGACTTATGCAACTTGAATATATATTTTTTCTGTAGGGTGTTTATCCCAAATTATCTGGCCATTTGCTGCAATTTGCAG i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505243 168 - 123690457 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCTAAACCTTTGGTTCTTTTAGATATAAATGAAATTATCATCAAAGAATTGCTCAAAGTGACTTATGCAACTTGAATATATATTTTTTCCTTAGAGTGTTTATCCCAAATTATCTGGGCATTTGCTGCAATTTGCAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040490 166 + 198365852 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCTAAACCTTTGGTGCTTTTAGATATAAATGAAA-TATCACCAAAGGATTGCT-AAAGTGACTTACGCAACTTGAATATATATTTTTTCCTTAGGGTGTTTATCCCAAATTATCTGGGCATTTGCTGCAATTTGCAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114132968 167 + 192294377 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCTAAACCTTTGGTGCTTTTAGATATAAATGAAA-TATCACCAAAGGATTGCTCAAAGTGACTTACGCAACTTGAATATATATTTTTTCCTTAGGGTGTTTATCCCAAATTATCTGGGCATTTGCTGCAATTTGCAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179343 167 + 180432695 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCTAAACCTTTGGTGCTTTTagatataaatgaaa-tatcaCCAAAGGATTGCTCAAAGTGACTTACGCaacttgaatatatattttttccttaggGTGTTTATCCCAAATTATCTGGGCATTTGCTGCAATttgcag i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246529 167 + 127223203 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCTAAACCTTTGGTGCTTTTAGATATAAATGAAA-TATCACTAAAGGATTGCTCAAAGTGACTTACGCAACTTGAATATATATTTTTTCCTTAGGGTGTTTATCCCAAATTATCTGAGCATTTGCTGCAATTTGCAG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640629 155 + 128169293 ATTATTTGGTTCTGGTTTTCTGGAAAAGCCAGCCAAACCTTTGGTTCATTTAGATAAAAATGAAA-TATC------------CTCAAAGTGACTTACGTAATTTGAATATGTATTTTTTCCTTAGGGTGCCTATCCCAAATTATCTGGGCATTTACTGCTATTTGCAG i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6180487 4656 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=6552.000000 s hg38.chrUn_GL000218v1 22506 2 + 161147 TT s panTro4.chr2A 18551646 2 - 113622374 TT i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505411 2 - 123690457 TT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040656 2 + 198365852 TT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133135 2 + 192294377 TT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179510 2 + 180432695 tt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246696 2 + 127223203 TT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640784 2 + 128169293 TT i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6185143 2 - 58292249 TT i saiBol1.JH378107 I 4656 I 57 e micMur1.scaffold_1595 123367 642 - 319779 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=52011.000000 s hg38.chrUn_GL000218v1 22508 33 + 161147 TTTT-----AGAAAACACCAAA-----TA--TTTCTCAATTTAGA s panTro4.chr2A 18551648 33 - 113622374 TTTT-----AGAAAACACCAAA-----TA--TTTTTCAAGTTAGA i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505413 37 - 123690457 TTTTT---AAAAAAACACCAAAA---TAG--TTATTCAAGTTAGA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040658 43 + 198365852 TTTTTAAAAAAAAAACACCAAAATAGTTA--TTTTTCAAGTTAGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133137 41 + 192294377 TTTTT--AAAAAAAACACCAAAATAGTTA--TTTTTCAAGTTAGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179512 42 + 180432695 ttttt-aaaaaaacccaccaaaatagtta--tttttcaagttaga i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246698 43 + 127223203 TTTTTTAAAAAAAAACACCAAAATAGTTA--TTTTTCAAGTTAGA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640786 43 + 128169293 --TTTAAAAAGAAAATATCAAAATTGTTATTTTTTTTAAGTTAGA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185145 57 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=3600.000000 s hg38.chrUn_GL000218v1 22541 1 + 161147 G s panTro4.chr2A 18551681 1 - 113622374 G i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94505450 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040701 1 + 198365852 G i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133178 1 + 192294377 G i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179554 1 + 180432695 g i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246741 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640829 1 + 128169293 G i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6185202 1 - 58292249 G i saiBol1.JH378107 I 57 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=10764.000000 s hg38.chrUn_GL000218v1 22542 3 + 161147 ATG s panTro4.chr2A 18551682 3 - 113622374 TTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391226 3 + 72422247 ATG i ponAbe2.chrUn N 0 C 0 s nomLeu3.chr11 94505451 3 - 123690457 ATG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040702 3 + 198365852 ATG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133179 3 + 192294377 ATG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179555 3 + 180432695 atg i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246742 3 + 127223203 ATG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640830 3 + 128169293 ATG i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6185203 3 - 58292249 ATG i saiBol1.JH378107 C 0 I 1418 e micMur1.scaffold_1595 123367 642 - 319779 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=42452.000000 s hg38.chrUn_GL000218v1 22545 14 + 161147 TTTTAATAAAAACA s panTro4.chr2A 18551685 14 - 113622374 TTTTAATAAAAACA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391229 14 + 72422247 TTTTAATAAAAACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505454 14 - 123690457 TTTTAATTAAAACA i nomLeu3.chr11 C 0 I 143 s rheMac3.chr3 120040705 14 + 198365852 TTTTAATAAAAACA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133182 14 + 192294377 TTTTAATAAAAACA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179558 14 + 180432695 ttttaataaaaaca i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246745 14 + 127223203 TTTTAATAAAAACA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640833 14 + 128169293 TTTTAATAAAAATG i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=637344.000000 s hg38.chrUn_GL000218v1 22559 225 + 161147 GTCATATTGAACTGGCAGCAGCCAAATAAAATAGCCCTTTATTTCACAGTTCAGAATTTGAAATTGGAAGGTAATTAACATATGTAAGGATGATATATTTGCTGCCTGGCTTATAGGAATGAGCCAAGTTGTTTTTTGAGGGATGTTGTTGCTGTGTATGTCCCACCTATTTTGCTTCCTTAA----TGAACAATGCAAGTTTGAGACAGAAATATTTGAGAACATTTT s panTro4.chr2A 18551699 225 - 113622374 GTCATTTTGAGTTGGCAGCAGCCAAATAAAATAGCCCTTTATTTCACAGTTGAGAATTTGAAATTGGAAGGTAATTCACATATGTAAGGATGATGTATTTGCTGCCTGGCTTATAGGAATGAGCCAAGTTGTTTTTTGAGGGATGTTGTTGCTGTATATGTCCCACCTATTTTGCTTGCTTAC----TGAACAATGCAAGTTTGAGACAGAAATATTTGAGAACATTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391243 223 + 72422247 GTCATTTTGAGCTGGCAGCAGCCAAATAAAATAGCCCTTGATTTCACAGTTGAGAATTTGAAATTGGAAGGTAATTAACATA--TAAGGATGATGTATTTGCTTCCTGGCTTATAGGAATGAGCCAAGTTGTTTTTTGAGGGATGTTGTTGCTGTATATGTCCCACCTATTTTGCTTCCTTAC----TGAACAATGCAAGTTTGAAACAGAAATATTTGAGAACATTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505611 228 - 123690457 GTCATTTTGAGCTGGCAGCAGCCAAATAAAACAGCCCTTTATTTCACAGTTGAGAATTTGAAATTGGAAAGTAATTAATGTATGTAAGGATGATTTATTTGCTTCTTGGCTTATAGGGATGAGCCAAGTT-TTTTATTAGGGATGTTGTTGCTGTATAAGTCCCACCTACTTTGCTTCCTTACTGAATGAACAATGCAACTTTGAGACAGAAATATTTGAGAACATTTT i nomLeu3.chr11 I 143 C 0 s rheMac3.chr3 120040719 223 + 198365852 GTCATTTTGAGCTGGCAGCAGCCAAATAAAACAGCGCTTTATTTCACAGTTGAGAATTGGAAATTGGAAAGTAATTAACATATGTGAGGATGACTTACTTGCTTCCTGGCTTATAGGGATGAGCCAAGT--TTTTATTAGGGATGTTGTTGCTGTATATGTCCCACCTAATTTGCTTCCTTAC----TGAACAATGCAACTTTGAGACAGAAATATTTGAGAACATTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133196 218 + 192294377 GTCATTTTGAGCTGGCAGCAGCCAAAT-----AGCGCTTTATTTCACAGTTGAGAATTGGAAATTGGAAAGTAATTAACATATGTGAGGATGACTTACTTGCTTCCTGGCTTATAGGGATGAGCCAAGT--TTTTATTAGGGATGTTGTTGCTGTATATGTCCCACCTGATTTGCTTCCTTAC----TGAACAATGCAACTTTGAGACAGAAATATTTGAGAACATTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179572 223 + 180432695 gtCATTTTGAGCTGGCAGCAGCCAAATAAAACAGTGCTTTATTTCACAGTTGAGAATTTGAAATTGGAAAGTAATTAACATATGTGAGGATGACTTACTTGCTTCCTGGCTTATAGGGATGAgccaagt--ttttattagggatgtTGTTGCTGTATATGTCCCACCTAATTTGCTTCCTTAC----TGAACAATGCAACTTTGAGACAGAAATATTTGAGAACATTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246759 223 + 127223203 GTCATTTTGAGCTGGCAGCAGCCAAATAAAACAGCGCTTTATTTCACAGTTGAGAATTTGAAATTGGAAAGTAATTAACATATGTAAGGATGACTTACTTGCTTCCTGGCTTATAGGGATGAGCCAAGT--TTTTATTAGGGATGTTGTTGCAGTATATGTCCCACCTAATTTGCTTCCTTAC----TGAACAATGCAACTTTGAGACAGAAATATTTGAGAACATTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49640847 223 + 128169293 GCCATTTTGAGCTGGTAGTAGTCAAATAAAACAGCCCTTTATTTCACAGTTGAGAATTTGAAATTGGAAAATAATTAATGTATGTAAGGGTGATTTATTTGCTTCCTGGCTTATAGGGAAGAGCCAAGTT-TTTTTTTAGGGCTGTTGCTGCTGTATATGTCCTATCTACTTTGTTTCCTTAC----TGAACATTA-AACTTTGAGACAGAAATATTTGAGGACATTTT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=4095.000000 s hg38.chrUn_GL000218v1 22784 1 + 161147 T s panTro4.chr2A 18551924 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391466 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505839 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040942 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133414 1 + 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179795 1 + 180432695 T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246982 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641070 1 + 128169293 T i calJac3.chr8 C 0 C 0 s tupBel1.scaffold_120811.1-215637 49303 1 - 215637 T i tupBel1.scaffold_120811.1-215637 N 0 I 18 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=23445.000000 s hg38.chrUn_GL000218v1 22785 17 + 161147 ATCAGTTG---CA-----ACACTTT s panTro4.chr2A 18551925 25 - 113622374 ATCAGTTGTGACATTTTGACATTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391467 25 + 72422247 ATCAGTAGCGACATTTTGACATTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505840 17 - 123690457 GTCAGTTA--------GGACATTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040943 17 + 198365852 GTCACTTG--------GGACATTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133415 17 + 192294377 GTCACTTG--------GGACATTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179796 17 + 180432695 GTCACTTG--------GGACATTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51246983 17 + 127223203 GTCACTTA--------GGACATTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641071 17 + 128169293 TTCTGTTA--------GGATATTTT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49304 18 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=-540.000000 s hg38.chrUn_GL000218v1 22802 1 + 161147 -G s panTro4.chr2A 18551950 1 - 113622374 -G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391492 1 + 72422247 -G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505857 1 - 123690457 -G i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040960 1 + 198365852 -G i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133432 1 + 192294377 -G i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179813 1 + 180432695 -G i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247000 1 + 127223203 -G i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641088 1 + 128169293 -G i calJac3.chr8 C 0 C 0 s tupBel1.scaffold_120811.1-215637 49322 1 - 215637 T- i tupBel1.scaffold_120811.1-215637 I 18 I 395 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=51603.000000 s hg38.chrUn_GL000218v1 22803 17 + 161147 ATAGTGAACATTTTATA s panTro4.chr2A 18551951 17 - 113622374 ATAGTGAACATTTTATA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391493 17 + 72422247 ATAGTGAACATTTTATA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505858 17 - 123690457 ATAGTGGACATTTTGTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040961 17 + 198365852 ATAGTGAACATTTTGTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133433 17 + 192294377 ATAGTGAACATTTTGTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179814 17 + 180432695 ATAGTGAACATTTTGTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247001 17 + 127223203 ATAGTGAACATTTTGTA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641089 17 + 128169293 ATAGCAAACATTTTGTA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=23453.000000 s hg38.chrUn_GL000218v1 22820 7 + 161147 TCTTCTG s panTro4.chr2A 18551968 7 - 113622374 TGTTCTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391510 7 + 72422247 TCTTCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505875 7 - 123690457 TCTTCTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040978 7 + 198365852 TCTTCTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133450 7 + 192294377 TCTTCTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179831 7 + 180432695 TCTTCTa i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247018 7 + 127223203 TCTTCTA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641106 7 + 128169293 TCTTCTG i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22250639 7 - 47208961 ttttctg i otoGar3.GL873524 N 0 I 204 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=33947.000000 s hg38.chrUn_GL000218v1 22827 16 + 161147 TCAACTTAAAATGTTT s panTro4.chr2A 18551975 16 - 113622374 TCAACTTAGAATGTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391517 16 + 72422247 TCAACTTAAAATGTTT i ponAbe2.chrUn C 0 I 101 s nomLeu3.chr11 94505882 16 - 123690457 TTAATTTAAAATGTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120040985 16 + 198365852 TTAACTTAAAATGTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133457 16 + 192294377 TTAACTTAAAATGTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179838 16 + 180432695 ttaacttaaaatgttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247025 16 + 127223203 TTAACTTAAAATGTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641113 4 + 128169293 TCAA------------ i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=-7341.000000 s hg38.chrUn_GL000218v1 22843 21 + 161147 GCATCTTCTGTCAGCTTAAAA s panTro4.chr2A 18551991 21 - 113622374 GTATCTTCTGTCAACTTAAAA i panTro4.chr2A C 0 I 105 s panPan1.AJFE01002925 880 21 - 3261 ACATCTTCTGTCagcttaaaa i panPan1.AJFE01002925 N 0 C 0 s ponAbe2.chrUn 5391634 21 + 72422247 GTATCTTATGTCAACTTAAAA i ponAbe2.chrUn I 101 C 0 s rheMac3.chr3 120041001 1 + 198365852 ----------------T---- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133473 1 + 192294377 ----------------T---- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179854 1 + 180432695 ----------------t---- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247041 1 + 127223203 ----------------T---- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641117 7 + 128169293 --------------CCTAAAA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e nomLeu3.chr11 94505898 0 - 123690457 C e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=4640.000000 s hg38.chrUn_GL000218v1 22864 5 + 161147 TGTTT s panTro4.chr2A 18552117 5 - 113622374 TGTTT i panTro4.chr2A I 105 C 0 s panPan1.AJFE01002925 901 5 - 3261 tgttt i panPan1.AJFE01002925 C 0 I 1503 s ponAbe2.chrUn 5391655 5 + 72422247 TGTTT i ponAbe2.chrUn C 0 C 0 s calJac3.chr8 49641124 5 + 128169293 TGTTT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e nomLeu3.chr11 94505898 0 - 123690457 C e chlSab2.chr21 51247042 0 + 127223203 C e papAnu2.chr3 104179855 0 + 180432695 C e macFas5.chr3 114133474 0 + 192294377 C e rheMac3.chr3 120041002 0 + 198365852 C e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=24678.000000 s hg38.chrUn_GL000218v1 22869 11 + 161147 AATTTGTTAT--A s panTro4.chr2A 18552122 11 - 113622374 AATTTGTTAT--A i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391660 11 + 72422247 AATTTGTTAT--A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505898 13 - 123690457 TATTTCTTATAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041002 10 + 198365852 -ATTTGTTAT--A i rheMac3.chr3 C 0 I 18 s macFas5.chr3 114133474 10 + 192294377 -GTTTGTTAT--A i macFas5.chr3 C 0 I 2 s papAnu2.chr3 104179855 10 + 180432695 -atttgttat--a i papAnu2.chr3 C 0 I 2 s chlSab2.chr21 51247042 10 + 127223203 -ATTTGTTAT--A i chlSab2.chr21 C 0 I 18 s calJac3.chr8 49641129 11 + 128169293 TACTTGTTAT--A i calJac3.chr8 C 0 I 2 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=12205.000000 s hg38.chrUn_GL000218v1 22880 36 + 161147 GCCAAATAATTTGGCTATAATTGATAATTTAATTTA s panTro4.chr2A 18552133 36 - 113622374 GCCAAATAATTTGGCTATAATTGATAGTTTAATTTA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391671 36 + 72422247 GGCAAATAATTTGGCTGTAATTGATAATTTAATTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505911 16 - 123690457 GCCAGGATATCTGA--------------------TA i nomLeu3.chr11 C 0 C 0 s macFas5.chr3 114133486 16 + 192294377 GCCAGGATATCTGA--------------------TA i macFas5.chr3 I 2 C 0 s papAnu2.chr3 104179867 16 + 180432695 GCCAGGATATCTGA--------------------TA i papAnu2.chr3 I 2 C 0 s calJac3.chr8 49641142 16 + 128169293 GCCAGGATATCTGA--------------------TA i calJac3.chr8 I 2 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e chlSab2.chr21 51247052 18 + 127223203 I e rheMac3.chr3 120041012 18 + 198365852 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=35234.000000 s hg38.chrUn_GL000218v1 22916 14 + 161147 TCAAATTAAATTGC s panTro4.chr2A 18552169 14 - 113622374 TCAAATTAAATTGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391707 14 + 72422247 TCAAATTAAATTGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505927 11 - 123690457 TCAAATTAAAT--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041030 14 + 198365852 TCAAATTAAATTGT i rheMac3.chr3 I 18 C 0 s macFas5.chr3 114133502 14 + 192294377 TCAAATTAAATTGT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179883 14 + 180432695 TCAAATTAAATcgt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247070 14 + 127223203 TCAAATTAAATTAT i chlSab2.chr21 I 18 C 0 s calJac3.chr8 49641158 14 + 128169293 TCAAATTAAATTCC i calJac3.chr8 C 0 I 127 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=305955.000000 s hg38.chrUn_GL000218v1 22930 110 + 161147 TTT-TTTTCCCTTTAGACTTTCTTCAGTCACATCTGAATAAATCACTTAGAAGTAAGCTAGATGTAATATAATGAAATGCTTAAAAGGGCTGTGTATCTTCATATTACA---------------CT s panTro4.chr2A 18552183 110 - 113622374 TTT-TTTTCCCTTTAGACTTTCTTCAGTCACATCTGAATAAATCACTTAGAAGTAAGCTAGATTTAATATAATGAAATGCTTAAAAGAGCTGTGTATCTTCATATTACA---------------CT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391721 104 + 72422247 TTT-TTTTCCCTTTAGACTTTCTTCAGTCACATC------AATCACTTAGAAGTAAGCTAGATGTAATATAATGAAATGCTTAAAAGAGCTGTGTATCTTCATATTACA---------------CT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94505938 110 - 123690457 TTT-TTTTCCCTTTAGATTTTCTTCAATCACATCTGAATAAATCACTTAAAGGTAACCTAAATGTAATATAGTGAAATGCCTAAAAGAGCTGTGTATCTTAGTATTACA---------------CT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041044 111 + 198365852 TTTCTTTTCCCTTTAGATTTTCTTCAATCACATCTGAATAAATCACTTAGAGGTAACCTAGATGTAATATGGTGAAATGCTTAAAAGAGCTGTGTATCTTAGTATTACA---------------CT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133516 111 + 192294377 TTTCTTTTCCCTTTAGATTTTCTTCAATCACATCTGAATAAATCACTTAGAGGTAACCTAGATGTAATATGGTGAAATGCTTAAAAGAGCTGTGTATCTTAGTATTACA---------------CT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104179897 111 + 180432695 tttcttttccctttagaTTTTCTTCAATCACATCTGAATAAATCACTTAGAGGTAACCTAGACGTAATATGGTGAAATGCTTAAAAGAGCTGTGTATCTTAGTATTACA---------------CT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247084 111 + 127223203 TTTCTTTTCCCTTTAGATTTTCTTCAATCACATCTGAATAAATCACTTAGAGGTAACCTAGATGTAATATAATGAAATGCTTAAAAGAGCTGTGTATCTTAGTATTACA---------------CT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641299 125 + 128169293 TTT-TTTTTCCTTTAGACTTTCTTCGGTAACATCTGAATACATCATTTAGAGGTAAGCTAGGTGTAATATACTGAAATGCTTAAAAGAGCTGTGCATCTTAATATTACAGATAGTAATCCTAGTAT i calJac3.chr8 I 127 C 0 e micMur1.scaffold_1595 123367 642 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=4095.000000 s hg38.chrUn_GL000218v1 23040 1 + 161147 T s panTro4.chr2A 18552293 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391825 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506048 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041155 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133627 1 + 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180008 1 + 180432695 T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247195 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641424 1 + 128169293 T i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 124009 1 - 319779 T i micMur1.scaffold_1595 I 642 I 2272 e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=119123.000000 s hg38.chrUn_GL000218v1 23041 41 + 161147 ACAG-----TGATTTTCTGTTGTACGCATTATATTCTACCTGCAGC s panTro4.chr2A 18552294 41 - 113622374 ACAG-----TGATTTTCTGTTGTACCCATTATATTCTACCTGCAGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391826 41 + 72422247 ACAG-----TGATTTTCTGTTGTACCCATTATGTTCTACCTGCAGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506049 46 - 123690457 ACAGCAGTATGATTTTCTGTTGTACCCATTATATGGTACCTGCAGC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041156 46 + 198365852 ACAGCAGTATGATTTTCTGTTGTATACATTATATTGTACCTGCAGC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133628 46 + 192294377 ACAGCAGTATGATTTTCTGTTGTATACATTATATTGTACCTGCAGC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180009 46 + 180432695 ACAGCAGTATGATTTTCTGTTGTATACATTATATTGTACCTGCAGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247196 46 + 127223203 ACAGCAGTATGATTTTCTGTTGTACCCATTATATTGTACCTGCAGC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641425 46 + 128169293 ACAGCAGTATGATTTTCTGTTCTACTCATTGTATTCTACCTGCAGC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22250646 204 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=223666.000000 s hg38.chrUn_GL000218v1 23082 80 + 161147 TAGTTGAGGAAAAGAGAGGGCATTTAACTGCCAAGGGAACCTGAGAGGAGACTGTAG-------------AAATCTGGAAAGTCTCTCGGGTC s panTro4.chr2A 18552335 80 - 113622374 TAGTTGAGGTAAAGAGAGGGCGTTTAACTGTCAAGGGAACCGCAGAGGAGACTGTAG-------------AAATCCGGAAAGTCTCTCGGATC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391867 80 + 72422247 TAGTTGACGTAAAGAGAGGGCATTTAACTGTCAAGGGAACCTGAGAGGAGACTGTAG-------------AAATCTGGAAAGTCTCTTGGATC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506095 80 - 123690457 TAGTTCAGATAAAGAGAGGGCATTTAACTGTCAAGGGAACCTGAGAGGAGACTCTAG-------------TAATCTGGAAAGTCTCTTGGATC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041202 80 + 198365852 TAGTTCAGATAAAGAGAGGGCATTTAACTGTCAAGACAACCTGAGAGGAGACTCTAG-------------TAATCTGGAAAGTCTCTTGGATC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133674 80 + 192294377 TAGTTCAGATAAAGAGAGGGCATTTAACTGTCAAGACAACCTGAGAGGAGACTCTAG-------------TAATCTGGAAAGTCTCTTGGATC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180055 80 + 180432695 TAGTTCAGATAAGGAGAGGGCATTTAACTGTCAAGACAACCTGAGAGGAGACTCTAG-------------TAATCTGGAAAGTCTCTTGGATC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247242 80 + 127223203 TAGTTCAGATAAAGAGAGGGCATTTAACTGTCAAGACAACCTGAGAGGAGACTCTAG-------------TAATCTGGAAAGTCTCTTGGATC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641471 79 + 128169293 TACTTCAAGTAAAGAGAGGGTATTTAACTGTCAAGGGAACCTGAGAGGAGACTCTAG-------------TAATCT-GAAAGTCTCTTGGATC i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22250850 89 - 47208961 tagctgggactataggtgccagccacaatgcccagctatttttagagatgggtcttagccttgctcaggcagatctggaaatcct----gagc i otoGar3.GL873524 I 204 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tupBel1.scaffold_120811.1-215637 49323 395 - 215637 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=8585.000000 s hg38.chrUn_GL000218v1 23162 3 + 161147 TTT s panTro4.chr2A 18552415 3 - 113622374 TTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391947 3 + 72422247 TTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506175 3 - 123690457 TTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041282 3 + 198365852 TTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133754 3 + 192294377 TTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180135 3 + 180432695 TTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247322 3 + 127223203 TTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641550 3 + 128169293 TTT i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22250939 2 - 47208961 tc- i otoGar3.GL873524 C 0 C 0 s tupBel1.scaffold_120811.1-215637 49718 3 - 215637 TTT i tupBel1.scaffold_120811.1-215637 I 395 N 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=672154.000000 s hg38.chrUn_GL000218v1 23165 232 + 161147 GAGGGA------CTTTGGGATGCAGAGAGTGGGGCTGGGATCTCTGGCTAGGTTGGAGCCAGCCTGCA---TTTGTATCTT-TATCTTGGAAGCAAACATAGAAT--------GCAGAGTTAGAT----ATGGTCTGGATGCTGCTAACTCTAGCCAACCACTAAATCTTAAGGTGGGAGAGATGCAGGCTTTGGCTGGG--TGCTAAGCTGCTG--------------------------TAGCTGGTT---------------GAATGT--AGAGGTCACTATCTTTT---CTGAAT----ACT s panTro4.chr2A 18552418 234 - 113622374 GAGGGA------TTTTGGGATGCAGAGAGTGGGGCTGGGATCTCTGGCTAGATTGGAGCCAGCCTGCA---TTTGTCTCTC-TATCTTGGAAGCAAACTTAGAAT--------GTAGAGATAGAT----GTGGCCTGGATGCTGCTAACTCTAGCCAACCACTAAATCTTAAGGTGGGAGAGATGCAGGCTTTGGCTGGG--TGCTAAGCTGCTG--------------------------TAGCCGGTT---------------GAATGTGTAGAGGTCACTATCTTTT---CTGAAT----ACT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5391950 235 + 72422247 GAGGGA------TTTTGGGATGCAGAGAGTGGGGCTGGGATCTCTGGCTAGGTTGGAGCCAGCCTGCATTTTTTGTATCTT-TATCTTGGAAGCAAACTTAGAAT--------GCAGAAATAGAT----GTGGCCTGGATGCTGCCAACTCTAGCCAACCACTAAATCTTAAGGTGGGAGAGATGCAGGCTTTGGCTGGG--TGCTAAGCTGCTA--------------------------TAGCTGGTT---------------GAATGT--AGAGGTCACTATCTTTT---CTGAAT----ACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506178 232 - 123690457 GAGGGA------TTTTGGGATGTTGAGAGTGGGGCTGGGATCTCTGGCTAGGTTGGAGCCAGCCTGCA---TTTGTATCTA-TATCTTGGAAGCAAACTTAGAAT--------GCAGAGACAGAT----GTGGCCTGGACGCTGCCAGCTCTAGCCAACCACTAAATCCTAAGGTGGGAGAGATGCAGGCTTTGGCTAGG--TGCTAAGCTGCTG--------------------------TAGCCGGTT---------------GAATGT--AGAGGTCACTATCTTTT---CTGAAT----ACC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041285 232 + 198365852 GAGGGA------TTTTGGGATGGAGAGAGTGGGGCTGGGATCTCTGGCTAGGCTGGAGCCAGCCTGGA---TTTGTATCTA-TATCTTGGAAGCAAACTTAGAAT--------GCAGAGACAGAT----GTGGCCTAGATGCTGCCAGCTCTAGCCAACCACTAAATCCTAAGGTGGGAGAGATGCAGGCTTTGACTAGG--TGCTAAGCTGCTG--------------------------TAGCCCATT---------------GAATGT--AGAGGTCACTATATTTT---CTGAAT----ACC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133757 232 + 192294377 GAGGGA------TTTTGGGATGGAGAGAGTGGGGCTGGGATCTCTGGCTAGGCTGGAGCCAGCCTGGA---TTTGTATCTA-TATCTTGGAAGCAAACTTAGAAT--------GCAGAGACAGAT----GTGGCCTAGATGCTGCCAGCTCTAGCCAACCACTAAATCCTAAGGTGGGAGAGATGCAGGCTTTGACTAGG--TGCTAAGCTGCTG--------------------------TAGCCCATT---------------GAATGT--AGAGGTCACTATATTTT---CTGAAT----ACC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180138 232 + 180432695 GAGGGA------TTTTGGGATGGAGAGAGTGGGGCTGGGATCTCTGGCTAGGCTGGAGCCAGCCTGGA---TTTGTATCTA-TATCTTGGAAGCAAACTTAGAAT--------GCAGAGACAGAT----GTGGCCTAGATGCTGCCAGCTCTAGCCAACCACTAAATCCTAAGGTGGGAGAGATGCAGGCTTTGACTAGG--TGCTAAGCTGCTG--------------------------TAGCCCATT---------------GAATGT--AGAGGTCACTATATTTT---CTGAAT----ACC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247325 233 + 127223203 GAGGGA------TTTTGGGATGGAGAGAGTGGGGCTGGGATCTTTGGCTAGGCTAGAGCCAGCCTGGA---TTTGTATCTATTATCTTGGAAGCAAACTTAGAAT--------GCAGAGACAGAT----GTGGCCTGGATGCTGCCAGCTCTAGCCAACCACTAAATCCTAAGGTGGGAGAGATGCAGGCTTTGACTAGG--TGCTAAGCTGCTG--------------------------TAGCCCACT---------------GAATGT--AGAGGTCACTATATTTT---CTGAAT----ACC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641553 225 + 128169293 GAGGGA------TTTTGGGATGGAGAGAGTGGGGCTGGGATCTCTGGCTAGGTAGGAGCCAGCCTGCA---TTTGTTTCTG-TATCTTGGAAGCAAACTTCGATT--------GCAGAAATAGAT----GTGGCCTGGATGTTGCTAGCTCTAGCCAACCAC-------TAAGGTGGGAGAGATGCAGGCTTTGGCTGGG--TGCTAAGCTGCTG--------------------------TAGCTGGTT---------------GGATAT--AGAGGTCACTATCTTTT---CTGAAT----ACT i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22250941 279 - 47208961 -aggcaatccacctgtcagcctcccagagt---gctaggattac-----aggcatgagccattgcaca---ct----gccT-TTTTTTTTAAAAAAACACAAAATctctgtcagctgggctagagtatagtggcatcattg----tagctcacggcaacttcaaactcctggcat-caagtgatcc---ttttgccttagcctcctgagtagctgggactacagtcgtacaccatcacacccagctaatttttctgtttttattagagtta--ggaactcactctttcttaggctggacttgaact i otoGar3.GL873524 C 0 I 944 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=182621.000000 s hg38.chrUn_GL000218v1 23397 64 + 161147 TGTAAGTAAATTAAATCATTCTCTACTCCTGTATGCCTGCCAACCAAATGGGAAATCGCTATAG s panTro4.chr2A 18552652 64 - 113622374 TGTAGGTAAATTAAATCATTCTCTACTCCCGTATGCCTGCCAACCTAATGGGAGATTGCTATAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392185 64 + 72422247 TGTAAGTAAATTAAATCATTCTCTACTCTCGTATGCCTGCCAACCTAATGGGAAATCGCTATAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506410 59 - 123690457 TGTAAG-----TAAATCATTCTCTACTCCTGTGTGCCTGCCAACCTAATGGGAAGTCGCTATAG i nomLeu3.chr11 C 0 I 302 s rheMac3.chr3 120041517 64 + 198365852 TGTAAGTAAATTAAATCATCCTCTACTCCCGTGTGCCTGCCAACCTAATGGGGAATCGCTATAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114133989 64 + 192294377 TGTAAGTAAATTAAATCATCCTCTACTCCCGTGTGCCTGCCAACCTAATGGGGAATCGCTATAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180370 64 + 180432695 TGTAAGTAAATTAAATCATTCTCTACTCCCGTGTGCCTGCCAACCTAATGGGGAATCGCTATAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247558 64 + 127223203 TGTAAGTAAATTAAATCATTCTCTCCTCCTATGTGCCTGCCAACCTAATGGGGAATCGCTATAG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641778 64 + 128169293 TGTAGGTAAATTCAATCATTCTCTACTCCCATGGGCCTGTCAACCTAATGGGAAATAGCAATAG i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=684659.000000 s hg38.chrUn_GL000218v1 23461 220 + 161147 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCACGTTTCTGGAATCAAGATTTAATGCCGACTTGGATTGGATATTGAATATTTTTTATTTGTCTACTTTTCTCTCCATAGGGAGCTT-ATAGCTTCATTGCACTGTGTGTGGCATTTGGGTCCTGTTTGGCAGCAATGACTGCCTTTCTGTTTAGTGTCTGTGTGCTATGAAGATTGCACAC s panTro4.chr2A 18552716 221 - 113622374 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCACATTTTTGGAATCAAGATTTAATGCAGACTTGGATTGGGTATTGAATATTTTTGATTTGTCTACTTTTCTCTCCATAGGGAGCTTTATAGCTTCATTGCACCATGTGTGGCATTTGGGTCCTGTTTGGCAGCAATGACTGCCTTTCTGTTTAGTGTCTGTGTGCTATGAAGATTGCACAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392249 220 + 72422247 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCACGTTTCTGGAATCAAGATTTAATGCAGACTTGGACTGGATATTGAATATTTTTGATTTGTCTACTTTTCTCTCCATAGGGAGCTT-ATAGCTTCATTGCACCATGTGTGGCATTTGGGTCCTGTTTGGCAGCAATGACTGCCTTTCTGTTTAGTGTCTGTGTGCTATGAAGATTGCACAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506771 220 - 123690457 aaaaGATGGTTTAAATTTTAGTCTTTGAAGCGGTTTATGCACGTTTCCGGAATCAAGATTTAATGCAGAGTTGGATTGGATATTGAATATTTTTGATTTGTCTGCTTTTCTCTCCATAGAGAGCTT-ATAGCTTCATTGCACCATGTGTGGCATTTGGGCGCTGTTTGGCAGTGATGACTGCCTTTCTGTTCAGTGTCTGAGTGCTATGAAGATTGCACAC i nomLeu3.chr11 I 302 C 0 s rheMac3.chr3 120041581 220 + 198365852 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCATGTTTCTGGAATCAAGATTTAATGCAGACTGGGATTGGATATTGAATATTTTTGATTTATCTGCTTTTATCTCCATAGAGAGCTT-ATAGCTTCATTGTGCCATGTGTGGCATTTGGGCCCTGTTTGGCAGTGACGACTGCCTTTCTGTTCAGTGTCTGAGTGCTATGAAGATTGCACAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134053 220 + 192294377 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCATGTTTCTGGAATCAAGATTTAATGCAGACTGGGATTGGATATTGAATATTTTTGATTTATCTGCTTTTATCTCCACAGAGAGCTT-ATAGCTTCATTGTGCCATGTGTGGCATTTGGGCCCTGTTTGGCAGTGACGACTGCCTTTCTGTTCAGTGTCTGAGTGCTATGAAGATTGCACAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180434 220 + 180432695 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCATGTTTCTGGAATCAAGATTTAATGCAGACTGGGATTGgatattgaatatttttgatttaCCTGCTTTTATCTCCATAGAGAGCTT-ATAGCTTCATTGTACCATGTGTGGCATTTGGGCCCTGTTTGGCAGTGACGACTGCCTTTCTGTTCAGTGTCTGAGTGCTATGAAGATTGCACAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247622 220 + 127223203 AAAAGATGGTTTAAATTTTAGTCTTTGAAGTGGTTTATGCATGTTTCTGGAATCAAGATTTAATGCAGACTTGGATTGGATATTGAATATTTTTGATTTATCTGCTTTTATCTCCATAGAGAGCTT-ATAGCTTCATTGCACCATGTGTGGCATTTGGGCCCTGTTTGGCAGTGACGACTGCCTTTCTGTTCAGTGTCTGAGTGCTATGAAGATTGCACAC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49641842 220 + 128169293 AAAAGGTGGTTTACATTTTAGTCTTTGAAGTGGTTTATACACGTTTCTGGAATCAAGATTTAATGCAGACTTGGATTGGATATTGAATATTTTTGATTTGTCTGCTTTTCTCTCCATAGAGAGCTT-ATAGTTTCATTGCACCATGTGTGGCATTTGGGCCCTGTTTGGCAGTGATGACTGCCTTTCTGTTCAGTGTCTGAGTGCCATGAAGATTGCACAC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1536166 1446 - 1560628 I a score=4095.000000 s hg38.chrUn_GL000218v1 23681 1 + 161147 A s panTro4.chr2A 18552937 1 - 113622374 A i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392469 1 + 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506991 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041801 1 + 198365852 A i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134273 1 + 192294377 A i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180654 1 + 180432695 A i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247842 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s rhiRox1.KN296879v1 1537612 1 - 1560628 A i rhiRox1.KN296879v1 I 1446 I 583 s calJac3.chr8 49642062 1 + 128169293 A i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I a score=843891.000000 s hg38.chrUn_GL000218v1 23682 283 + 161147 GGGGTCCAAATGCATCCTGTTTTGAGAATGTCAATGGATACACCAGTTGCTGCTTTGGATTTCACTGGTTGGTGGTAGTTGACCCACTGTTTGGAATGCAGCCAATTTAAGTGAAGACATATCCATATATGTGGCTCTGTTACAGTGGTGAAATCTGCAACCATAAGAAGGTAGGGAAAAAGAAGCCAGATGTCTGGATGTGATTAAACTTCAGAGCTTGTTGATTACGATGATATTATATATTCTGTATCATGCTTTTTACTTTGCAAAGCATTCTA----TGTTA s panTro4.chr2A 18552938 283 - 113622374 GGGGTCCAGATGCATTCTGTTTTGAGAATGTCAATGGATACACTAGCTGCTGCTTTGGATTTCACCAGTTGGTGGTAGTTGACCCGCTGTTTGGAATGCAGCCAATTTAAGTGAAGAAATATCCATACACGTGGCTCTGTTACAATGGTGAAATCTACAACCATAAGAAGGTAAGGAAAAAGAAACCAGATGTCTGGATGCAATTAAACTTCAGAGCTTGTTGGTTACGATGATATTATATATTCTGTATCATGCTTTTTATTTTGCAAAGCATTCTA----TGTTA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392470 283 + 72422247 GGGGTCCAGATGCATTCTGTTTTGAGAATGTCAATGGATACACCAGCTGCTGCTTTGGATTTCACCGGTTGGTGGTAGTTGACCCGCTGTTTGGAATGCAGCCAATTTAAGTGAAGAAATATCCATATATGTGGCTCTGTTACAGTGGTGAAATCTACAACCATAAGAAGGTAAGGAAAAAGAAACCAGATGTCTGGATGCGATTAAACTTCAGAGCTTGTTGGTTACGATGATATTATATATTCTGTATCATGCTTTTTACTTTGCAAAGCATTCTA----TGTTA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94506992 276 - 123690457 GAGGTCCAGATGCATTCCGTTTTGAGAATGTCAATGGATACACCAACTGCTGCTTTGGATTTCACCGGTTGGCGGTAGTTGACCCGCTGTTTGGAATGCAGCCAATTCGAGTGAAGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAAATCTACAACCATAAGAAGGTGAGGAGAAAGAAACCAGATG-----------TTAAACTTCAGAGTTTGTTGGTTACGATGATGTTACATATTCTGTATCATGCTTTTTACTTTGCAAAGCACTCTATGTTTGTTA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120041802 287 + 198365852 GAGGGCCAGATGCATTCCGTTTTGAGAATGTCAATGGATACACCAACTGCTGCTTTGGATTTCACCGATTGGCAGTAGTTGATCCGCTGTTTGGAATGCAGCCAATTCGAGTGAAGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAAATCTACAACTATAAGAAGGTAAGGAGAAAGAAACCAGATGTCTGGATGCGATTAAACTTAAGAGTTTGTTGGTCACGATGATATTACATATTCTGTATCATGCTTTTTACTTTGCAAGGCACTCTATGTTCATTA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134274 287 + 192294377 GAGGGCCAGATGCATTCCGTTTTGAGAATGTCAATGGATACACCAACTGCTGCTTTGGATTTCACCGATTGGCAGTAGTTGATCCGCTGTTTGGAATGCAGCCAATTCGAGTGAAGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAAATCTACAACTATAAGAAGGTAAGGAGAAAGAAACCAGATGTCTGGATGCGATTAAACTTAAGAGTTTGTTGGTCACGATGATATTACATATTCTGTATCATGCTTTTTACTTTGCAAGGCACTCTATGTTCATTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180655 287 + 180432695 GAGGGCCAGATGCATTCCGTTTTGAGAATGTCAATGGATACACCAACTGCTGCTTTGGATTTCACCGATTGGCAGTAGTTGATCCGCTGTTTGGAATGCAGCCAATTCGAGTGAAGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAAATCTACAACTATAAGAAGGTAAGGAGAAAGAAACCAGATGTCTGGATGTGATTAAACTTAAGAGTTTGTTGGTCACGATGATATTACATATTCTGTATCATGCTTTTTACTTTGCAAGGCACTCTATGTTCGTTA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51247843 287 + 127223203 GAGGGCCAGATGCATTCCGTTTTGAGAATGTCAATGGATACACCAACTGCTGCTTTGGATTTCACCGATTGGCAGTAGTTGATCCGCTGTTTGGAATGCAGCCAATTCGAGTGAAGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAAATCTACAACTATAAGAAGGTAAGGAGAAAGAAACCAGATGTCTGGATGCAATTAAACTTAAGAGTTTGTTGGTCACGATGATATTACATATTCTGTATCATTCTTTTTACTTTGCAAGGCACTCTATGTTCGTTA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642063 283 + 128169293 GGGGTCCAGATGCATTTCGTTTTGAGAATGTCAGTGGATACACCAACTGCTGCTTTGGCTTTCACCGGTTGGCAGTAGTGGACCCTCTGTTTGGAATGCAGCCAATTCGAGTGAGGAAATATCCGTATTTGTGGCTCTGTTACAATGGTGAGATCTACAACCATAGGAAGGTAAGGAAAAAGAAGCCAGATGTCTGGATGTGATTAAACTTCAGAGCTTGTTGGTTACAATGATATTATATATTTTGTATCGTGCTTTTTACTTTGCAAAACACtcca----catta i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=58545.000000 s hg38.chrUn_GL000218v1 23965 24 + 161147 TCTCATTTGCTCTAAGTATGTAGA s panTro4.chr2A 18553221 24 - 113622374 TCTCATTTGCTCTAAGTATGTAGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392753 24 + 72422247 TCTCATTTGCTCTAAGTATGTAGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507268 24 - 123690457 TCTCATTTGCTCTAAGTATGTAAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042089 24 + 198365852 ACTCATTTGCTCTAAGTATGTAAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134561 24 + 192294377 ACTCATTTGCTCTAAGTATGTAAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180942 24 + 180432695 TCTCATTTGCTCTAAGTATGTAAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51248130 24 + 127223203 TCTCATTTGCTCTAAGTATGTAAA i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6185206 1418 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=1577.000000 s hg38.chrUn_GL000218v1 23989 1 + 161147 C s panTro4.chr2A 18553245 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392777 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507292 1 - 123690457 T i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042113 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134585 1 + 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180966 1 + 180432695 T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51248154 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s saiBol1.JH378107 6186624 1 - 58292249 C i saiBol1.JH378107 I 1418 I 214 e micMur1.scaffold_1595 124010 2272 - 319779 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=464680.000000 s hg38.chrUn_GL000218v1 23990 226 + 161147 AGGGAACTGATGAATAAAATGGTGAGTGAAATCACTTGGTCACAAAAAAAGTGATAAAAATGGGGATTACA---CAGTTTCTTTGACGCTTAGAA-TTTTTTCTCCTTCTCCCCAGCtttttgttttgaaaaaaattctaacatacagaaaagaacagaatagtgagcacctagattgaataatcattaatgttttgccatatttgcttgatttttctttctacaca----------cac s panTro4.chr2A 18553246 226 - 113622374 AGGGAACTGATCAATAAAATGGTGATTGAAATGACTTGGTCACAAAAAAAGTGATAAAAATGGGGATTACA---CAGTTTTTTTGACTCTTAGAA-GTTTTTCTCCTTCTCCCCAGCtttttgttttgaaaaaaattctaacatacagaaaagaacagaatagtgagcccctagattgaataatcattaatgttttgccatatttgcttgatttttctttctacaca----------caa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392778 195 + 72422247 AGGGAACTG----ATAAAGTGGTGAGTGAAATGACTTGGTCACAAAAAGAGTGATAAA---------------------------ACTCTCAGAA-TTTTTTCTCCTTCTCCCCAGCtttttgttttgaaaaaaattctaacatacagaaaaaaacagaatagtgagcacctagattgaataatcat---tgttttgccatatttgcttgatttttctttctacaca----------cac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507293 239 - 123690457 agggaactgatgaataaaaaggtgagcgaaatgacttggtcacaaaaaaagtgataaaaatggggattacagttcagtttcattgactcttagaa-ttttttctccttctccccagcttttcattttgaaaaaattcctaacatacagtaaagaacagaacagtgagcacccagattgaatagtcattaatgttttgccatagttgcttgatttttctttctacacacgcgtgcgtgcac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042114 227 + 198365852 agggaactgatgaataaaaaggtgagtgaaatgacatggtcacaaaagaagtgataaaaatgagaattacagttcagtttctttgactcttagaatttttttctccttctccccagcttttcattttgaaaaaatttctaacatatagaaaagaacagaacagcgagcacctagattgaatagtcattaatgttttgccatatttgcttgagttttctttt---gca----------cac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134586 227 + 192294377 AGGGAACTGATGAATAAAAAGGTGAGTGAAATGACATGGTCACAAAAGAAGTGATAAAAATGAGAATTACAGTTCAGTTTCTTTGACTCTTAGAATTTTTTTCTCCTTCTCCCCAGCttttcattttgaaaaaatttctaacatatagaaaagaacagaacagcgagcacctagattgaatagtcattaatgttttgccatatttgcttgagttttctttt---gca----------cac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104180967 229 + 180432695 AGGGAACTGATGAATAAAAAGGTGAGTGAAATGACATGGTCACAAAAGAAGTGATAAAAATGAGAATTACAGTTCAGTTTCTTTGactcttagaatttttttctccttctccccagCTTTTCATTTTGAACAAATTTCTAACATatagaaaagaacagaacagcGAGCACCTAGATTGAATAGTCATTAatgttttgccatatttgcttgagttttctttt-acaca----------cac i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51248155 221 + 127223203 AGGGAACTGATGAATAAAAAGGTGAGTGAAATGACATGGTCACAAAAGAAGTGATAAAAATGAGAATTACAGTTCAGTTTCTTTGACTCTTAGAATTTTTTTCTCCTTCTCCCCAGCttttcattttgaaaaaatttctaacatatacaaaagaacagaacagcgagcacctagattgaatagtcattaatgttttgccatatttgcttgagttttctttt------------------- i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186625 214 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=9121.000000 s hg38.chrUn_GL000218v1 24216 4 + 161147 acac s panTro4.chr2A 18553472 4 - 113622374 acac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392973 4 + 72422247 acac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507532 4 - 123690457 acac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042341 4 + 198365852 acac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134813 4 + 192294377 acac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104181196 4 + 180432695 acac i papAnu2.chr3 C 0 C 0 s saiBol1.JH378107 6186839 4 - 58292249 acag i saiBol1.JH378107 I 214 I 3896 e micMur1.scaffold_1595 124010 2272 - 319779 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248376 0 + 127223203 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=507.000000 s hg38.chrUn_GL000218v1 24220 5 + 161147 acaca s panTro4.chr2A 18553476 5 - 113622374 acagg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392977 5 + 72422247 acaca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507536 5 - 123690457 acaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042345 3 + 198365852 aca-- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134817 3 + 192294377 aca-- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104181200 3 + 180432695 aca-- i papAnu2.chr3 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248376 0 + 127223203 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1537613 583 - 1560628 I a score=10304.000000 s hg38.chrUn_GL000218v1 24225 20 + 161147 cacacacacacacacaca---------gt s ponAbe2.chrUn 5392982 6 + 72422247 --------------caca---------gt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507541 14 - 123690457 ------cacacacacaca---------at i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042348 18 + 198365852 aacacacacacacacaca----------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134820 16 + 192294377 a--acacacacacacaca----------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104181203 18 + 180432695 aacacacacacacataca----------- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51248376 13 + 127223203 -----acacacacacaca----------- i chlSab2.chr21 C 0 C 0 s rhiRox1.KN296879v1 1538196 27 - 1560628 cacacacacacacacacatgcacacag-- i rhiRox1.KN296879v1 I 583 I 455 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e panTro4.chr2A 18553481 0 - 113622374 C a score=315345.000000 s hg38.chrUn_GL000218v1 24245 134 + 161147 ttttttgccaaatcatttgagagtatggtgcagattttgtgacactcctaaatatataagcttttatctcctaagaataaggacatttttctacataacatcaataccattattaaacctaagaatccataata s panTro4.chr2A 18553481 133 - 113622374 -tttttgccaaatcatttgagagtgtggtgcagattttgtgacacttctaaatatataagcatttatctcctaagaataaggacatttttctacataacatcaataccattattaaacctaagaatccataata i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5392988 133 + 72422247 -tttttgccaaatcatttcagagtatggtgcagattttgtgacactcctaaatatataagcatttatctcctaagaataaggacatttttctacataacatcaataccattattaaacctaagaatccataata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94507555 134 - 123690457 ttttttgctgaatcatttgagagtacagtgcagatattatgacactcttaaatatataagcatttatctactaagaataaggacattcttctacataacatcaatgccattactaaacctaagaatccataaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120042366 133 + 198365852 -tttttgctgaatcatttgagagtacagtacagatattatgacactcctaaatatataagcatttatcttctaagaataaggacattcttctacataacatcaatgccattattaaacctaagagtccataata i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114134836 133 + 192294377 -tttttgctgaatcatttgagagtacagtacagatattatgacactcctaaatatataagcatttatcttctaagaataaggacattcttctacataacatcaatgccattattaaacctaagagtccataata i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104181221 133 + 180432695 -tttttgcTGAATCATTTGAGAGTACAGTACAGATATTATGACACTCCTAAATATATAAGCATTTATCTTCTAAGAATAAGGACATTCTTCTACATAACATCAATGTCATTATTAAACCTAAGAGTCCATAATA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51248389 133 + 127223203 -tttttgctgaatcatttgagagtacagtacagatattatgatactcctaaatatataagcatttatcttctaagaataaggacattcttctacataacatcaatgccattattaaacctaagagtccataata i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e panPan1.AJFE01002925 906 1503 - 3261 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=47043.000000 s hg38.chrUn_GL000218v1 24379 104 + 161147 tcacctggctgggtgcggtggctcacacctgtaatcccagcactttgggaggctgaggtgggtggatcacgaggtcaggaggtc---gaagcca------tgctggctatcac s panTro4.chr2A 18553614 104 - 113622374 ccacctggccaggcgcggtgtcttacacctgtaatcccagcactttgggaggccaaggtgggcagatcacgaggtcaggaggtt---gagacca------tgctggctaacac i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2409 104 - 3261 tcacctggctgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcatgaggtcaggaggtc---gaagCCA------TGctggctatcac i panPan1.AJFE01002925 I 1503 C 0 s ponAbe2.chrUn 5393121 113 + 72422247 ccACCTggccgggtgcggtggctcacgcctgtaatcccagcattttgggaggccgaggcaggcagatcacgaggtcaggaggtcaaggaggtcaggagatcgctggctaacat i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e otoGar3.GL873524 22251220 944 - 47208961 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=476.000000 s hg38.chrUn_GL000218v1 24483 1 + 161147 g s panTro4.chr2A 18553718 1 - 113622374 g i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2513 1 - 3261 g i panPan1.AJFE01002925 C 0 C 0 s ponAbe2.chrUn 5393234 1 + 72422247 g i ponAbe2.chrUn C 0 C 0 s otoGar3.GL873524 22252164 1 - 47208961 a i otoGar3.GL873524 I 944 I 151 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=35972.000000 s hg38.chrUn_GL000218v1 24484 84 + 161147 gtgaaaccccgtctccactaaaaatacaaaaataaaata-tcagccaggcatggtggtgggcacctgtattcccagctactcggg s panTro4.chr2A 18553719 85 - 113622374 gtgaaaccctgtctccactaaaaatacaaaaataaaaaaatcagcgaggcgtggtggcgggcacctgtagtcccagctgctccag i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2514 85 - 3261 gtgaaaccccgtctccactaaaaatacaaaaataaaaaaatcagccaggcatggtggtgggcacctgtagtcccagctactcggg i panPan1.AJFE01002925 C 0 C 0 s ponAbe2.chrUn 5393235 78 + 72422247 gtgaaaccctgtctccaccaaaaatacaaaaataaa----tcagccaggtgtggtggcgggtacctgtagtcccggttactt--- i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e gorGor3.chr2A 18845412 538 - 111351968 I e otoGar3.GL873524 22252165 151 - 47208961 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=36076.000000 s hg38.chrUn_GL000218v1 24568 41 + 161147 aggctgaggcaggagaatggtgtgaacctgggaggtggagc s panTro4.chr2A 18553804 41 - 113622374 aggctgaggcaggagaatggcgtaaacccgggaggtagagc i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2599 41 - 3261 aggctgaggcaggagaatggtgtgaacctgggaggtggagc i panPan1.AJFE01002925 C 0 C 0 s gorGor3.chr1 123837938 41 + 229507203 aggctgaggcaggagaatggcgtgaacctggaaggtggagc i gorGor3.chr1 I 6571 C 0 s ponAbe2.chrUn 5393313 40 + 72422247 -ggctgaggcaggagaatggcgtgaacccgggaggtggagc i ponAbe2.chrUn C 0 I 1402 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e otoGar3.GL873524 22252165 151 - 47208961 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=34280.000000 s hg38.chrUn_GL000218v1 24609 43 + 161147 ttgcagggagccaagattgagtcactgtactttagcctggaag s panTro4.chr2A 18553845 43 - 113622374 ttgcagtgagccaagattgagccactgcactccagcctgggag i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2640 43 - 3261 ttgcagggagccaagattgagccactgtactccagcctggaag i panPan1.AJFE01002925 C 0 C 0 s gorGor3.chr1 123837979 43 + 229507203 ttgtagtgtgccaagattgagtcactgtactccagcctgggag i gorGor3.chr1 C 0 C 0 s ponAbe2.chrUn 5394755 43 + 72422247 ttgcagtgagccaagattgagccattgcattccagcctgggag i ponAbe2.chrUn I 1402 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e otoGar3.GL873524 22252165 151 - 47208961 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=26797.000000 s hg38.chrUn_GL000218v1 24652 30 + 161147 acagagca----------agactctgtctcaaaaaagaaa s panTro4.chr2A 18553888 30 - 113622374 acagagca----------agactctgtctcaaaaaaaaaa i panTro4.chr2A C 0 C 0 s panPan1.AJFE01002925 2683 30 - 3261 acagagca----------agactctgtctcaaaaaagaaa i panPan1.AJFE01002925 C 0 N 0 s gorGor3.chr1 123838022 30 + 229507203 acagagca----------agactctgtctcaaaaaagaaa i gorGor3.chr1 C 0 N 0 s ponAbe2.chrUn 5394798 30 + 72422247 acagagca----------agactctgtttcacaaaaaaaa i ponAbe2.chrUn C 0 C 0 s otoGar3.GL873524 22252316 40 - 47208961 acATGGCATCTGTACTTTAAATTCTATTAGGGAACAGACA i otoGar3.GL873524 I 151 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e rhiRox1.KN296879v1 1538223 455 - 1560628 I a score=1332.000000 s hg38.chrUn_GL000218v1 24682 2 + 161147 aa s panTro4.chr2A 18553918 2 - 113622374 aa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5394828 2 + 72422247 aa i ponAbe2.chrUn C 0 C 0 s rhiRox1.KN296879v1 1538678 2 - 1560628 aa i rhiRox1.KN296879v1 I 455 I 15271 s otoGar3.GL873524 22252356 2 - 47208961 GA i otoGar3.GL873524 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I a score=1638.000000 s hg38.chrUn_GL000218v1 24684 3 + 161147 aaa s panTro4.chr2A 18553920 3 - 113622374 aaa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5394830 3 + 72422247 aaa i ponAbe2.chrUn C 0 C 0 s otoGar3.GL873524 22252358 3 - 47208961 AAA i otoGar3.GL873524 C 0 I 2756 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=203.000000 s hg38.chrUn_GL000218v1 24687 9 + 161147 aa---------cataatg s panTro4.chr2A 18553923 18 - 113622374 aaaaaaaaaaccacgata i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5394833 11 + 72422247 aa-------aCCATAATA i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94507689 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51248522 0 + 127223203 C e papAnu2.chr3 104181354 0 + 180432695 C e macFas5.chr3 114134969 0 + 192294377 C e rheMac3.chr3 120042499 0 + 198365852 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1222775.000000 s hg38.chrUn_GL000218v1 24696 545 + 161147 ccacctaatatccagtttatactt-----aaatttccctaagtgtctgaaaaa-tttttttttttt---------------------gaaacagagtctcaactttgtcacccaggatggagtgcagtgttgcgatctcagctcactgcaacctctgcctcccgggttcaagcaattctccttcttcagcctcctgagtagctgggactacaggcccacctgtcgccatgcctggctaattttttgtattttagtaaagactggg-------------cccagggtggtctggaactcctaagctcaggcaatctgctcaccttggcccctcaaagtgctaccaagaatatctttatagctggtatttgtttgtttagagacagatttcattcaagattcatgcatttggttgtgatgtttcttGGTATTTTTTCTGAGACTTCTTGATAGATA-CCTGTCATGCACTGATAGAGAGTTATATCCTAACCATGTTTTGGACATTTTTATCTCTGAA-TAATAGCTTTTGTCATTGTTTGTTGCCTGCTCACGGGAACACTCTTAATAATAGTCTTCTTCTTCAAAAT s panTro4.chr2A 18553941 556 - 113622374 ccacctaatatccagtttatactt-----aaatttccctaagtgtctggagga-tttttttttttttt--------tttttttttttgagacag--tctcaactttgtcacccaggctggagtgcagtgttgtgatcttggctcactgcaacctctgcctcccaggttcaagcgattctccttcttcagcctcctgagtagctgggactacaggcccacctgtcaccacgcttggctgattttctgtattttagtaaagacgggg------------gcccagggtggtctggaactcctgagctcaggcagtctgctcaccttggcctctcaaagtgctaccaagaatatctttatggctggtttttgtttgttttgatccagatttcattcaagtttcatgcatttggttgtgatgtttcttGGTATTTTTT-TGAGACTTTTTGATAGATA-CCTGTCATGCACTGATAGAGATTTATATCCTATCTATGTTTTGGACATTTTTCTCTCTGAA-TAATAGCTTTTGTCATTGTTTGTTGCCTGCTCATGGGAACACTCTTAATAATAGTCTTCTTGCTCAAAAG i panTro4.chr2A C 0 I 1 s ponAbe2.chrUn 5394844 557 + 72422247 CCACCTAATATCCAGTTTATACTT-----AAATTTCCTTAAGTGTCTGGAGGA-tttttttttttttt--------tttttttttttgagacagagtttcaactttgtcacccaggctggagtgcagtgttgcgatctcggctcactgcaacctctgcctcccaggttcaagctattctccttcttcagcctcctgagtagctgggactacaggcccacttgtcaccatgcttggctaattttttgtattttagtaaagacgggg------------gcccagggtggtctggaactcctgagctcaggcaatctgctcaccttggcctctcaaagtTATACCAAGAATATCTTTATAGCTGGTTTTTGTTTGTTTTGAGCCAGATTTCATTCAAGGTTCATGCATTTGGTTGTGATGTTTCTTGGTATTTTTT-TGAGACTTCTTGATAGATA-CCTGTCATGCACTGATAGAGATTTATATCCTAAC--TGTTTTGGACATTTTAATCTCTGAATTAATAGCTTTTGTCATTGTTTGTTGTCTGCTCATGGGAACACTCTTAATAATAGTCTTCTTGTTCAAAAA i ponAbe2.chrUn C 0 I 1 s nomLeu3.chr11 94507689 579 - 123690457 ccacctaatatccagttaatacttaaatgaaatttccctaagtgtcccaagaa-tttttttatttgtttttatttatttatttttttgagacagagtctc-actctgtcacgcaggctggagtgcagtggtgcgatctcggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggaccacagg--cacctgccaccatgcccggctaattttttgtattttagtaaagacagggtttcaccatgttgcccagggtggtctggaactcctgagctcaggcaatctgcccaccttgacctctgaaagtgctaccaagaatatctttatagctggtttttgtttgttttgagccagatttcattcaaggttcatgcatttggttggtacgtttcttggtattttt--tGAGACTTCTTGATAGATA-CTTGTCATGCATTGATAGAGATTTATATCCTAATCACATTTTGGACATTTTTATCTCTGAA-CAATAGCTTTTGTCATTGTTTGTTGCCTGCTCATAGGAAGACTCTTAATAATAGTCTTCTCATTTAAAAA i nomLeu3.chr11 C 0 I 1 s rheMac3.chr3 120042499 560 + 198365852 ccacctaatatccagtttattcttaaatgaaatttccctaagtgtcccaagaattttttttttttt---------------------gagacagagtctc-actctgtcacccaggctggagtgcagtggcacgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctccctcagcctcccaagtagctgggactacaga--cacctgccaccatgcccagctaattttttgtattttagtaaagacagggtttcaccatgttgcccagggtggtctggaactcctgagctcaggcaatctgcccaccttggccactcaaagtgttaccaagaatatctttatagctggtttttgtttgttttgagctagatttcattcaaggttcatgcatttggttgtgatgtttcttggtgttttt--tGAGACTTCTTGATAGATACCCTGTCATGCATTGATAGAGATTTATATCCTAATCACATTTTGGACATTTTTATCTCTAAA-CAAAAGCTTTTGTCATTGTTTGTTGCCTGCTCATAGGAACACTCTTAATAACAGTCTTCTCGTTTAAAAA i rheMac3.chr3 C 0 I 1 s macFas5.chr3 114134969 560 + 192294377 ccacctaatatccagtttattcttaaatgaaatttccctaagtgtcccaagaattttttttttttt---------------------gagacagagtctc-actctgtcacccaggctggagtgcagtggcacgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctccctcagcctcccaagtagctgggactacaga--cacctgccaccatgcccagctaattttttgtattttagtaaagacagggtttcaccatgttgcccagggtggtctggaactcctgagctcaggcaatctgcccaccttggccactcaaagtgttaccaagaatatctttatagctggtttttgtttgttttgagctagatttcattcaaggttcatgcatttggttgtgatgtttcttGGTGTTTTT--TGAGACTTCTTGATAGATACCCTGTCATGCATTGAGAGAGATTTATATCCTAATCACATTTTGGACATTTTTATCTCTGAA-CAAAAGCTTTTGTCATTGTTTGTTGCCTGCTCATAGGAACACTCTTAATAACAGTCTTCTCGTTTAAAAA i macFas5.chr3 C 0 I 1 s papAnu2.chr3 104181354 559 + 180432695 CCACCTAATATCCAGTTTATTCTTAAATGAAATTTCCCTAAGTGtcccaagaa-tttttttttttt---------------------gagacagagtctc-actctgtcacccaggctggagtgcagtggcacgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctccctcagcctcccgagtagctgggactacaga--cacctgccaccatgcccagctaattttttgtattttagtaaagatggggtttcaccatgttgcccagggtggtctggaactcctgagctcaggcaatctgcccaccttggccactcAAAGTGTTACCAAGAATATCTTTAtagctggtttttgtttgttttgagctgGATTTCATTCAAGGTTCATGCATTTGGTTGTGATGTTTCTTGGTGTTTTT--TGAGACTTCTTGATAGATACCCTGTCATGCATTGATAGAGATTTATATCCTAATCACATTTTGGACATTTTTATCTCTGAA-CAAAAGCTTTTGTCATTGTTTGTTGCCTGCTCATAGGAACACTCTTAATAACAGTCTTCTcgtttaaaaa i papAnu2.chr3 C 0 I 750 s chlSab2.chr21 51248522 555 + 127223203 ccacctaatatccagtttattcttaaatgaaatttccctaagtgtcccaataa-tttttttttttt---------------------gagacagagtctc-actctgtcacccaggctggagtgcagtggcgcgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctccctcaacctcccaagtagctgggactacaga--cacctgccaccatgcccagctaattttttgtattttagtaaagacggggtttcaccatgttgcccagggtagtctggaactcctgagctcaggcaatctgcccaccttggccactcaaagtgttaccaaaaatatctttatagctggtttttgtttgttttgagctagatttcattcaaggttcatgcatttggttgtgatgtttcttGGTGTTTTT--TGAGACTTCTTGATAGATACCCTGTCATGCATTGATAGAGATTTATATCCTAATCACATTTTGGACATTTTTATCTCTGAA-CAAAAGCTTTTGTCA----TTGTTGCCTGCTCATAGGAACACTCTTAATAACAGTCTTCTCGTTTAAAAA i chlSab2.chr21 C 0 I 1 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=113710.000000 s hg38.chrUn_GL000218v1 25241 48 + 161147 TTTTAAAAGAGTTATTCAAGAAATTCCTTTCACACATTTCTTTATTCC s panTro4.chr2A 18554498 48 - 113622374 TTTTGAAATAGTTATTCAAGAAATTCCTTTCACACATTTCTTTATTCC i panTro4.chr2A I 1 C 0 s ponAbe2.chrUn 5395402 48 + 72422247 TTTTGAAATAGTTATTCAAGAAATTCCTTTCACACATTTCTTTATTCC i ponAbe2.chrUn I 1 C 0 s nomLeu3.chr11 94508269 48 - 123690457 TTTTAAAATAATTATTCAGGAAATTCCTTTTGCACATTTCTTTATTCC i nomLeu3.chr11 I 1 C 0 s rheMac3.chr3 120043060 48 + 198365852 TTTTAAAATAGTTATTCAGGAGATTCCTTTTACACATTTCTTTATTCC i rheMac3.chr3 I 1 C 0 s macFas5.chr3 114135530 48 + 192294377 TTTTAAAATAGTTATTCAAGAGATTCCTTTTACACATTTCTTTATTCC i macFas5.chr3 I 1 C 0 s papAnu2.chr3 104182663 48 + 180432695 ttttaaaatagttattcaGGAGATTCCTTTTACgcatttctttattcc i papAnu2.chr3 I 750 C 0 s chlSab2.chr21 51249078 48 + 127223203 TTTTAAAATAGTTATTCAGGAGATTCCTTTTACACATTTCTTTATTCC i chlSab2.chr21 I 1 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 9923 7255 + 445202 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=299881.000000 s hg38.chrUn_GL000218v1 25289 129 + 161147 TTTATT-AAGGTCTTAATATGCACCAGACAT-CATTTTTCTAGGTGATTGTAGATGAAATGGTGAAAAGGAAAGGCAAGAATGGAATTTCCTGCTAGTGGGAAG-T----AGAAGAGAGTATTAAAACTTTTTTCT s panTro4.chr2A 18554546 129 - 113622374 TTTATT-AGGGGCCTAATATGCACCAGACGT-CATTAATCTAGGTGATCGTAGATGAAATGGTGAAAAGGAAAGGCAAGAATGGAATTTCCTGCTAGTGGGAAG-T----AGAAGAGCGTATTAAAACTTTTTTCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5395450 130 + 72422247 tttatt-aagggcctaatatgcaccagacat-catttttctaggtgattgtagatgaaatggtgaaaaggaaaggcaagaatggaatttcctgctagtgggaagTT----AGAAGAGAGTATTAAAACTTTTTTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94508317 132 - 123690457 tttatt-aagggtctactatgcaccagacat-catttttctaggtgactggagatgaaatggtgaaaaggaaaggcaagactggaatttcctgctagtgggagg-TA-GAAGAAGAGAGTATTAAATTTTTTTTCT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120043108 133 + 198365852 tttattaaaggacctactatgcaccagacat-catttttctaggtgattggagatgaaatggtgaaaaggaaaggcaagaatgtactttcctgctagtgggagg-tg-gaagaAGAGAGTATTACAACTTTTTTCT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114135578 133 + 192294377 tttattaaaggacctactatgcaccagacat-catttttctaggtgattggagatgaaatggtgaaaaggaaaggcaagaatGTACTTTCCTGCTAGTGGGAGG-TG-GAAGAAGAGAGTATTACAACTTTTTTCT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104182711 132 + 180432695 tttatt-aagGACCTACTATGCACCAGACAT-CATTTTTCTAGGTGATTGGAGATGAAATGGTGAAAAGGAAAGGCAAGAATGGACTTTCCTGCTAGTGGGAGG-TG-GAAGAAGAGAGTAttacaacttttttct i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51249126 132 + 127223203 tttatt-aagggcctactatgccccagacat-catttttctaggtgattggagatgaaatggtgaaaaggaaaggcaagaatggaccttcctgctagtgggagg-tg-gaagaAGAGAGTATTACAACTTTTTTCT i chlSab2.chr21 C 0 C 0 s tarSyr2.KE944822v1 75490 121 - 120423 TTTATA-CAAATTTCAAAGTATACCGGATATAAAGTTATTTAGGTG-CTATAGATGAAGTACTGTGAGGGAAAGGTGAAA------------GCTAATTCAAAG-TACAAAACAGCAAAGATTACAACTTTTATCT i tarSyr2.KE944822v1 n 7255 n 7255 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=728881.000000 s hg38.chrUn_GL000218v1 25418 372 + 161147 TTCCAAGTCAAATCAG--------TGTCATATACATGAGAAAGCTAGGTGGTATGATGGCATTATCAGCTTGGCTTTCTCCTTAAATGAAATAGAAAGTGCCCTGTTTTACTCAGACAGT--------GTTTTTTTTTT---------CTAAAAAGCTAAAAGAAGTTAAATATTTTGAAAACAATTAATTTCTGTTCTAAATTATTCAAATGTT-ATATTTGTAAAACTAGAGAAGTTTGTTCCATTGCTTCTACCAAGCATCTCAGCTTATGTAGTTGGGGCAGCTAGAA----ATCTAATGAACAGAATGTATATTTTAGGCTTATATAAAGTATTCTGCAACATAAGTTCAAAAATACCCCC---------TACCCCCTTTTTGATAAAAA-TAAAGTTTACTACTAC s panTro4.chr2A 18554675 388 - 113622374 TTCTAAGTCAAATCAG--------TGTCATATACATGAGAATGCTAGGCGGTATGATGGCGTTATCAGCTTGGCTTTCTCCTTAAATGAAATAGGAAGTGCCCTGTTTTACTGGGACAGTAGTGTTTTGTTTTTTTTTTTTTTTTTTGCTAAAAAGTTACAAGAAGTTAAATATTTTGAAAATAATTAATTTCCATTCTAAATTAGTCAAATGTT-ATATTTGCAAAACTAGAGAAGTTTGTTCTATTGCTTCTACCAAGCGTCTCAGCTTATGTAGTTGGGGCAGCTATAA----ATCTAATGAACAGAATGTATATTGTAGGCTTATATAAAGTATTCTGCAACATAAGCTCAAAAATACCCCC-----------ACCCCTTTTTGATAAAAAATAAAGTTTACTACTAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5395580 384 + 72422247 TTCTAAGTCAAATCAG--------TGTCATATACATGAGAATGCTAGGCGGTATGATGGCATTATCAGCTTGGCTTTCTCCTTAAATGAAATAGGAAGTGCCCTGTTTTACTTGGACAGTGGT-----GTTTTTTTTTTTTTTTTTTGCTAAAACGTTACTAGAAGTTAAATATTTTGAAAATAATTAATTTCTGTTCTAAATTAGTCAAATGTTAATATTTGTAAAACTAGAGAAGTTTGTTCCATTGCTTCTACCAAGCATCTCAGCTTATGTAGTTGGGGCAGCTGGAA----ATCTAATGAACAGGATGTATATTTTAGGCTTATATAAAGTATTATGCAACATAAGCTCAAAAATACCCCC----------ACCACCTTTTTGATAAAAG-TAAAGTTTACTACTAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94508449 374 - 123690457 TTCTAAGTCAAATAAGTCAAATAATGTCATATACATGAGAATGCTAGATGGTATTATGGCATTATCAGCTTGGCTTTCCCCTTAAATGAAATAGGAAGTGCCCTGTTTCACTTGAACAGT--------GTTGTTTCTTT-------TATTAAAAAGTAATAAGAAGTTAAATATTTTGAAAATAATTAATTTCTATTCTAAATCAGCCAAATGTT-ATATTTGTAAAAGTAGAGAAGTTTGTTCCATTGCTTCTACCAAGCATCTAAGCTTATGTAGTTGGGGCAGCTGGCAGTCTGTCTAATGAGCAGAATGTATATTTTAGGCTTATATAAAGTAT--------------TCAAAAATCCCCCC-C------ACACCTCCTTTTTGGTAAAAA-TAAAGTTGACCACTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120043241 364 + 198365852 TTCTGAGTCAAATCAG--------TGTCACATACCTGAGAATGCTAGGTGGTGCTATGGCATTGTCAGCTTGGCTTTCCCCTTAAATGAAATAGGAAACGCCCTGCTTCACTTGAACAGT--------GTTGTTTCTTT------TCATTAAAAAGTTACAAGAAGTTAAATATCTTGAAAATAATTAATTTCTATTCTGAATTAGCCAAATGTT-TCATTTGTAAAAGTAGAGAAGTTTGTTCCAT----------AAGCATCGAAGCTTATGTAGTTGGGGCAGCTAGCAAACTGTCTAATGAACAGAATGTGTATTTTAGGCTTATATAAAGTAT--------------TCAAAAATCCCCCCACACACACACACCTCCTTTTTGGTAAAAA-TAAAGTTTACCACTAC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114135711 362 + 192294377 TTCTGAGTCAAATCAG--------TGTCACATACGTGAGAATGCTAGGTGGTGCTATGGCATTGTCAGCTTGGCTTTCCCCTTAAATGAAATAGGAAACGCCCTGCTTCACTTGAACAGT--------GTTGTTTCTTT------TCATTAAAAAGTTACAAGAAGTTAAATATCTTGAAAATAATTAATTTCTATTCTGAATTAGCCAAATGTT-TCATTTGTAAAAGTAGAGAAGTTTGTTCCAT----------AAGCATCGAAGCTTATGTAGTTGGGGCAGCTAGCAAACTGTCTAATGAACAGAATGTGTATTTTAGGCTTATATAAAGTAT--------------TCAAAAATCCCCC--CCCACACACACCTCCTTTTTGGTAAAAA-TAAAGTTTACCACTAC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104182843 360 + 180432695 ttctgagtcaAATCAG--------TGTCACATACGTGAGAATGCTAGGTGGTGGTATGGCATTGTCAGCTTGGCTTTCCCCTTAAATGAAATAGGAAACGCCCTGCTTCACTTGAACAGT--------gttgtttcttt------tcattaaaaagttacaagaagttaaatattttgaaaataattaatttctATTCTGAATTAGCCAAATGTT-TCATTTGTAAAAGTAGAGAAGTTTGTTCCAT----------AAGCATCGAAGCTTATTTAGTTGGGGCAGCTAGCAAACTGTCTAATGAACAGAATGTGTATTTTAGGCTTATATAAAGTAT--------------TCAAAAATcccccc-cccA---ACACCTCctttttggtaaaaa-taaagtttaccaCTAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51249258 363 + 127223203 TTCTGAGTCAAATCAG--------TGCCACATACGTGAGAATGCCAGGTGGTGCTATGGCATTGTCAGCTTGGCTTTCCCCTTAAATGAAATAGGAAACGCCCTGCTTCACTTGAACAGT--------GTTGTTTCTTT------TTATTAAAAAGTTACAAGAAGTTAAATATTTTGAAAATAATTAATTTCTATTCTGAATTAGCCAACTGTT-TTATTTGTAAAAGTAGAGAAGTTTGTTCCAT----------AAGCATCGAAGCTTATGTAGGTGGGGCAGCTAGCAAACTGTCTAATGAACAGAATGTATATTTTAGGCTTATATAAAGTAT--------------TCAAAAATCCGCCC-CCCCCCCACACCTCCTTTTTGGTAAAAA-TAAAGTTTACCACTAC i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 124010 2272 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=546.000000 s hg38.chrUn_GL000218v1 25790 1 + 161147 T s panTro4.chr2A 18555063 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5395964 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s micMur1.scaffold_1595 126282 1 - 319779 T i micMur1.scaffold_1595 I 2272 I 796 e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94508823 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51249621 0 + 127223203 C e papAnu2.chr3 104183203 0 + 180432695 C e macFas5.chr3 114136073 0 + 192294377 C e rheMac3.chr3 120043605 0 + 198365852 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=728849.000000 s hg38.chrUn_GL000218v1 25791 328 + 161147 AATAAAATACAGCCAGAGGTGTGCTGGGAGTGGAGGGGG-ACTGAGTGAAAGAAAGTAGGAACGGGGTAAAGGCTGGGGCAAAGAGCAGGCTCTCTCCCTGCAGGGGAATATCAGGGGCCTGAAGCCAAGTTAAATGACAGCATGACTTCAGGAGGCCAGATTTGAGGGCTTTTATCTAAAATGCAGCATCGGAGTTTGG-TTTAAGAGAGTAGGAAGTGATACATCTGTTACCCAAAGGACTCTTCTCTTTTTTAAATAAATTACCTGCAGAGTTTAGGCCAAAGAGGTGGGCAAGGTAGATTTGGGAAACTGTTGCTTGCTAATATCA s panTro4.chr2A 18555064 315 - 113622374 AATAAAATATAGCCAGAGGTGTGCTGGATGTGGAGGGGGGACTGAGTGAAAGAAAGTAGGAATGGGATAAAGGCTGGGGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCGGGGGCCTGGAGCCAAGTTAAATGACAGCATGACTTCAGGAGGCCAGATTTGAGGGCTTTTATCTAAGATGCAGCATTGGAGTTTGG-TTTAAGAGAGTAGGAAGTGATACATCCATTACCCAAAGGACGCTTCTCTTTTTTAAATAAATTACCTGCAGAGTTTAG--------------CAAGCGAGAGTTGGGAAACTGTTGCTTGCTAATATCA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5395965 325 + 72422247 AATAAAATACAGCCAGAGGTGTGCTGGGAGTGGAGGGGG-ACTGAGTG-AAGAAAGTAGGAATGGGGTAAAGGCTGGGGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTTAAATGACAGCGTGACTTCAGGAGGCCAGATTTGAGGGCTTTTATCTAAGATGCAGCATCGGAGTTTGG-TTTAAGAGAGTAGGAAGTGATACCTCTGTTACCCAAAGGAC-CTTCTCTTTTTTAAATAAATTACCTGCAGAGTTTAGGCCAAAGAGGTGG-CAAGGTAGATTTGGGAAACTGTTGCTTGCTAATATCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94508823 322 - 123690457 AATAAAATACAGCCAGAGGTGTACTGGGAGTAGAAGGAG-ACTGAATGAAAGAAAGGAGGAATGGGGTAAAGGCTGGGGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTCAAATGACAGCATGACATCAGGAGGCAAGATTTGAGGGCTTCTATCTAAG-------ATTGGAGTTTGGTTTTAGGAGAGTAGGAAGTAATACATCCGTTACCCAAAGGACGCTTCTCCTTTTTAAATAAATTACCTGCAAAGTTTAGGCCAAAGAGGTGGGCAAGGTAGATTTGGGAAGCTGTTGCTTACTAATATCA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120043605 329 + 198365852 AATGAAGTACAGTCAGAGGTGTGCTGGGAGTAGAGGGAG-ACTGAATGAAAAACAGGAGAAATGGGGTCAAGGCTAGAGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTCAGATGACAGCATGAGTTCAGGAGGTAAGATTTGAGGGCTTTTATCTAAGATGCAGCATTGGAGTTTGGTTTCAGGGGAGTAGGAAGCGATACATCCATTACCCAAAGGACGCTTCTCCCTTTTAAATAAATTACCTGCAAAGTTTAGGCCAAAGAGGTGGGCAAGGTAGATTTTGGAAGCTGTTGCTTGCTAATATCA i rheMac3.chr3 C 0 I 21 s macFas5.chr3 114136073 329 + 192294377 AATGAAATACAGTCAGAGGTGTGCTGGGAGTAGAGGGAG-ACTGAATGAAAAACAGGAGAAATGGGGTCAAGGCTAGAGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTCAGATGACAGCATGAGTTCAGGAGGTAAGATTTGAGGGCTTTTATCTAAGATGCAGCATTGGAGTTTGGTTTCAGGGGAGTAGGAAGCGATACATCCATTACCCAAAGGACCCTTCTCCCTTTTAAATAAATTACCTGCAAAGTTTAGGCCAAAGAGGTGGGCAAGGTAGATTTTGGAAGCTGTTGCTTGCTAATATCA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183203 329 + 180432695 AATGAAATACAGTCAGAGGTGTGCTGAGAGCAGAGGGAG-ACTGAATGAAAAACAGGAGAAATGGGGTCAAGGCTAGAGCAAAGAGCAGGCCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTCAGATGACAGCCTGACCTCAGGAGGTAAGATTTGAGGGCTTTTATCTAAGATGCAGCATTGGAGTTTGGTTTCAGGGGAGTAGGAAGTGATACATCCATTACCCAAAGGACCCTTCgcccttttaaataaattacctgcAAAGTTTAGGCCAAAGAGGTGGGCAAGGTAGATTTTGGAAGCTGTTGCTTGCTAATATCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51249621 329 + 127223203 AATAAAATACAGTCAGAGGTGTGCTGGGAGTAGAGGGAG-ACTGAATGAAAAACAGGAGAAATGGGGTCAAGGCTAGAGCAAAGAGCAGGTCCTCTCCCTGCAGGGGAGTATCAGGGGCCTGCAGCCAAGTCAGATGACAGCATGACTTCAGGAGGTAAGATTTGAGGGCTTTTATCTGAGATGCAGCATTGGAGTTTGGTTTCAGGGGAGTAGGAAGTGATACATCCATTACCCAAAGGACCCTTCTCCCTTTTAAATAAATTGCCTGCAAAGTTTAGGCCAAATTGGTGGGCAAGGTAGATTTTGGAAGCTGTTACTTGCTAATATCA i chlSab2.chr21 C 0 I 21 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=11017.000000 s hg38.chrUn_GL000218v1 26119 11 + 161147 CCAAACGCTTT s panTro4.chr2A 18555379 11 - 113622374 CCAAATGCTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5396290 11 + 72422247 CCAAATGCttt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509145 11 - 123690457 CCGAATGCTTT i nomLeu3.chr11 C 0 I 3 s macFas5.chr3 114136402 11 + 192294377 GTGAATGCTTT i macFas5.chr3 C 0 I 2 s papAnu2.chr3 104183532 11 + 180432695 GTGAATGCTTT i papAnu2.chr3 C 0 I 2 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51249950 21 + 127223203 I e rheMac3.chr3 120043934 21 + 198365852 I e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=167644.000000 s hg38.chrUn_GL000218v1 26130 691 + 161147 CTTTTTAT-------------------ACCTGGTGGAGGCTTTAATTGGGGCAAGGACATTTTTATATAAAGATAGAGAAAACAATCGCCTATGGAATTTGATTCCTTGCTCCATGCCCTCGCTAGCACCTCTCAAGATGCTTGATGATATTTAACATTTCTTCATAGGGAAAAAACTTTTCACCCCACAATTAGAATCAGGCTTAACTTTCTTTTTGAAAAGGTAGTATGTAATTTTTGTTAAGATATAAATTACCAAGATTTTTATATCTTGAAACAGATTTAGATGATAGAGTGGGGTAGGTGGTGGT---TGGTGGGAAGGGGTAGTTTTTTAGAGAGGGTATTAAGAGTTGGAAATTTCAATGTGAGAGAGGTGAAGGTTTGAAAATAAGTAAGAAAAGCACTAAAAGGCTGAAGTCAAGGGCCTCTGAGAGCCAGGATGATAGATTCTATTTCACAGTTTAACACAGGATCAGCATAGACCAAAGCAAGTTTGTAACTAAGGCAATGAAGATCATCTGTCTCCTCCCTTCCCCATTAATTGTGAACTTTAGTTTTATAAGCTCCTAAGAGGCAGAAAACAAATTGGAGCCTCGTCTTCTATTTGGGAGTGTATGGCATGTATTTATTGTCCTAGGTGCTGGGTTTATTTCTTTCAGCTAATGACAGTTTTCCATGCTTTATGGTAAGTGACCATAAAGTAAGTGGTA s panTro4.chr2A 18555390 672 - 113622374 TTTTTTTT----------------TTTACTTGGTGGAGGCTGTAATTGGGGCAAGGACATTTTTATACAAAAATAGAGAAAACAATCGCCTATGGAATTTGATTCCTTGCTCCATGCCCTCGCTAGCACCTCTCCACATGCTTGATGATATTTAAAATTTCTTCATAGGGAAAAAGCTTTTCATCCCACAATTAGAATCAGGCTTAACTTGCTTTTTGAAGAGGTAGTATGTAATTTGTGTTAAGATATAAATTACCAAGATTTTTATATCTTGAAACAGATTTAGATGATAGAGTGAGGTAGGTGGTGGTGGTTGGTGGGAAGGGGTAGTTTGTTAGAGAGGGTATTAAGAGTTGGGATTTTCAATGTGAGAGACGTGAAGGTTTGAAAATAAGTAAGAAAAGCACTAAAAGGATGAAGTCAAGGGCCTCTGAGAGCCAGGATGATAGATTCTATTTCACAGTTTAACACAGGATCACCATAGACCAAAGCAAGTTTATAACTAAGGCAGTGAAGATCATCTGTCTCCTCCCTTCCCCACTAATTGTGATCTT-AGTTTTATAAGCTCCTAAGAGGCAGAAAACAAGTTGGAGACCCGTCATCTATTTTGGAGTATATGGCATGTATCTATTGTCCTAGGTGCTGGGTTTCTTT-TTTCAGCTAATGACAGTTTTCCATGCTTTATGGT----------------------- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5396301 690 + 72422247 tttttttttttttttttttttttttttACTTGGCGGAGGCTTTAATTGGGGCAAGGACATTTTTATACAAAGATAGAGAAAACAATCGCCTTTGGAATTTGATTCCTTGCACCATGCCCTCGCTAGCACCGCTCCACATGCTTGATGATATTTAAAATTTCTTCACAGGGAAAAAGCTTTTCATCCCACAATTAGAATCAGGCTTAACTTGCTTTTTAAAGAGGTAGTATGTAATTTGTGTTAAGATATAAATTACCAAGATTTTTATATCTTGAAACAGATTTAGATGATAGAGTGAGGTAGGTGGTGGTGGTTGGTGGGAAGGGGTAGTTTGTTAGAGAGGATATTAAGAGTTGGGATTTTCAATGTGAGAGAGGTGAAGGTTTGAAAATAAGTAAGAAAAGCACTAAAAGGATGAAGTCAAGGGCTTCTGAGAGCCAGGATGATAGATTCTATTTCACAGTTTAACACAGGATCACCATAGACCAAAGCAAGTTTATAACTAAGGCAATGAAGATCATCTGTCTCCTCCCTTCCCCATTAATTGTGAACTTTAGTTTCATAAGCTCCTAAGAGGCAGAAAACAAGTCGGAGACCCGTCATCTATTTGGGAGTATATGGCATGTATCTATTGTCCTAGGTGCTGGGTTTATTTTTTTCAGCTAATGACAGTTTTCCATGCTTTATGGT----------------------- i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94509156 3 - 123690457 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51249950 21 + 127223203 I e papAnu2.chr3 104183543 2 + 180432695 I e macFas5.chr3 114136413 2 + 192294377 I e rheMac3.chr3 120043934 21 + 198365852 I e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=273.000000 s hg38.chrUn_GL000218v1 26821 1 + 161147 A s macFas5.chr3 114136415 1 + 192294377 A i macFas5.chr3 I 2 C 0 s papAnu2.chr3 104183545 1 + 180432695 A i papAnu2.chr3 I 2 C 0 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e nomLeu3.chr11 94509156 3 - 123690457 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51249950 21 + 127223203 I e rheMac3.chr3 120043934 21 + 198365852 I e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5396991 0 + 72422247 C e panTro4.chr2A 18556062 0 - 113622374 C a score=4710.000000 s hg38.chrUn_GL000218v1 26822 7 + 161147 GTGACTT s panTro4.chr2A 18556062 5 - 113622374 --CACTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5396991 5 + 72422247 --CACTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509159 7 - 123690457 GTCACTA i nomLeu3.chr11 I 3 C 0 s macFas5.chr3 114136416 7 + 192294377 GTCACTA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183546 7 + 180432695 GTCACTA i papAnu2.chr3 C 0 C 0 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51249950 21 + 127223203 I e rheMac3.chr3 120043934 21 + 198365852 I e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=649292.000000 s hg38.chrUn_GL000218v1 26829 262 + 161147 ACCCTTCAGGCAGTTCAGCCCAGGACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGACTTTATAGTCAGTGGAGGCAAAGCCCATTTTTGGACAGTTCATTGAGGGCTTACAGATAAAAGGTTCACAAATTATGCAGTGAGCTGGATGGAGTGTGAAGCGTATTTATGGGTCGTGCACATACATAATAGGTTTACTTTTTGAGATTTGAA s panTro4.chr2A 18556067 262 - 113622374 ACCCTTCAGGCAGTTCAGCCCAGGACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGTGGTGACCAGGTAGTGGCTTTATAGTCACTGGAGGCAAAGCCCATTTTTGGACAGTTCATTGAGGGCTTACAGACAAAAGGTTCACAAATTATGGAGTGAGCCGGATGGAGTGTGAAGCATATTTATGGGTCGTGCACATACATAATAGGTTTAGTTTTTGAGATTTGAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5396996 259 + 72422247 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAA---TGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGGCTTTATAGTCACTGGAGGCAAAACCCATTTTTGGACAGTTCATTGAGGGCTTACAGACAAAAGGTTCACAAATTATGGAGTGAGCTGGATGGAGTGTGAAGCATATTTATGGGTCGTGCACATACATAATAGGTTTAGTTTTTGAGATTTGAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509166 262 - 123690457 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAAGACTGTTTCCAGGCCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGACTTTATAGTCACTGGAGGCAAAGCCCATTTTTGGACAGTTCAGTGAGGGCTTATAGACAAAAGATTCACAAATTATGGAGTGAGCTGGATGGAGCGTGAAGCATATTTATGGGTCATGCACATACATAATAGATTTACTTTTTGAAATTTGAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120043955 262 + 198365852 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAAAGCAGAGAGGGGTGACCAGGTAGTGACTTTACAGTTACTGGAGGCAAAGCCCATTTTTGGACAGTTCAGTGAGGGCTTATAGACAAAAGATTCACAAATGATGGAGTGAGCTGGATGGAGTGTGAAGCGTATTTATGGGTCATGCACATACATGATAGGTTTACTTTTTGAAATTTGAA i rheMac3.chr3 I 21 C 0 s macFas5.chr3 114136423 262 + 192294377 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGACTTTACAGTCACTGGAGGCAAAGCCCATTTTTGGACAGTTCAGTGAGGGCTTATAGACAAAAGATTCACAAATGATGGAGTGAGCTGGATGGAGTGTGAAGCGTATTTATGGGTCATGCACATACATGACAGGTTTACTTTTTGAAATTTGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183553 262 + 180432695 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGACTTTACAGTCACTGGAGGCAAAGCCTATTTTTGGACAGTTTGGTGAGGGCTTAGAGACAAAAGATTCATAAATGATGGAGTGAGCTGGATGGAGTGTGAAGCATATTTATGGGTCATGCACATACATAATAGGTTtactttttgaaatttgaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51249971 262 + 127223203 ACCCTTCAGGCAGTTCAGCCCAGAACAGTCAGCAGAAGACTGTTTCCAGACCCCACCTGCTAGTTACAGATCATCCCTGATAGAGCAGAGAGGGGTGACCAGGTAGTGACTTTACAGTCACTGGAGGCAAAGCCCATTTTTGGACAGTTCAGTGAGGGCTTATAGACAAAAGATTCACAAATGATGGAGTGAGCTGGATGGAGTGTGAAGCATATTTATGGGTCATGCACATACATAATAGGTTTACTTTTTGAAATTTGAA i chlSab2.chr21 I 21 C 0 e micMur1.scaffold_1595 126283 796 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=3276.000000 s hg38.chrUn_GL000218v1 27091 1 + 161147 A s panTro4.chr2A 18556329 1 - 113622374 A i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397255 1 + 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509428 1 - 123690457 A i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044217 1 + 198365852 A i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136685 1 + 192294377 A i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183815 1 + 180432695 a i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250233 1 + 127223203 A i chlSab2.chr21 C 0 C 0 s micMur1.scaffold_1595 127079 1 - 319779 A i micMur1.scaffold_1595 I 796 I 20 e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=26720.000000 s hg38.chrUn_GL000218v1 27092 12 + 161147 ACATGTTTTAAC s panTro4.chr2A 18556330 12 - 113622374 ACATGTTTTAAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397256 12 + 72422247 ACATGTTTTAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509429 12 - 123690457 GCATGTTTTAAG i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044218 12 + 198365852 GCATGTTTTAAG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136686 12 + 192294377 GCATGTTTTAAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183816 12 + 180432695 gcATGTTTTAAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250234 12 + 127223203 GCATGTTTTAAG i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127080 20 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=6876.000000 s hg38.chrUn_GL000218v1 27104 2 + 161147 CT s panTro4.chr2A 18556342 2 - 113622374 CT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397268 2 + 72422247 CT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509441 2 - 123690457 CT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044230 2 + 198365852 CT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136698 2 + 192294377 CT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183828 2 + 180432695 CT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250246 2 + 127223203 CT i chlSab2.chr21 C 0 C 0 s micMur1.scaffold_1595 127100 2 - 319779 CT i micMur1.scaffold_1595 I 20 I 79 e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=148947.000000 s hg38.chrUn_GL000218v1 27106 67 + 161147 TAACCTAGGATTCCCACCTGATTTAAACCTCTTATTTGTCTAATGTCAGCCAAAAATGTGAGTATGA s panTro4.chr2A 18556344 67 - 113622374 TAACCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTCTAATGTCAGCCAAAAATGTGAGTATGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397270 67 + 72422247 TAACCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTGTAATGTCAGCCAAAAATGTGAGTATGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509443 66 - 123690457 T-ATCTAGGATTTCCACCTGATTTAAACCTCTTCTTCCTCTAATGTCAGCCAAAAACCCGAGTACAA i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044232 66 + 198365852 T-ATCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTCTAATGTCAGCCAAAAACCTGAGTACAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136700 66 + 192294377 T-ATCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTCTAATGTCAGCCAAAAACCTGAGTACAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183830 66 + 180432695 T-ATCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTCTAATGTCAGCCAAAAACCTGAGTACAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250248 66 + 127223203 T-ATCTAGGATTTCCACCTGATTTAAACCTCTTCTTTCTCTAATATCAGCCAAAAACCTGAGTACAA i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127102 79 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=-900.000000 s hg38.chrUn_GL000218v1 27173 1 + 161147 C s panTro4.chr2A 18556411 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397337 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509509 1 - 123690457 G i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044298 1 + 198365852 G i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136766 1 + 192294377 G i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183896 1 + 180432695 G i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250314 1 + 127223203 G i chlSab2.chr21 C 0 C 0 s micMur1.scaffold_1595 127181 1 - 319779 C i micMur1.scaffold_1595 I 79 I 851 e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1319838.000000 s hg38.chrUn_GL000218v1 27174 570 + 161147 ATACAAAGAGAAATACATCAAGGACTTTTCATC---------------------CTCAAAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGTGAGTAGCCTAATCAAACTTTTTTGCTCTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGACATGCAGACTATTAAAGTGCCACCATCATTTTATCTCTCAGTGAGCAGTAGTTTTAATGCTACTGCAGTGGTGGGCGCTCTGGGCGTTGTCATCCTCACCTGAGGACAAGCAGCTTTGTTTTGGATCATGTATCTGTTATTGTGATGGAGCCATTTATTTTTCAGGGAATGATGCCAAATGATGTTTGTCCCTTTGCTTTACATTTTTATAGCTAGGTCTTTGAAGCTGAACTGGAGGAACTTCTCAGCCAATACTGTCTTCTCAAACCAAAAGTTGACAGTTGCAGAAGACACGTTTTTTAGTGTCATGGCAACCAAGCAACATATTACCTTAAattaaatttagaggttgagcatccctaatctgaaaatctgaaatttgaaatgcttcaaaatctgaaactttttgagcactgacatgacaccac s panTro4.chr2A 18556412 565 - 113622374 ATACAAACAGTAATACATCAAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGGGAGTATCCTAATCAAACCTTCTTACTCTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCAAGCAGACTAATAAAGCGCCACCATCATTTTATCTCTCAGTGAGGGGTAGTTTTAATGCTACTGCAGTGGTGGAAGCACTGGGAGTTGTCATCCACCCCTGAGGACAAGCAGCTTTGTTTTGGATCATGTATCTGTTATTGTGATGGAGCCATTTATTTTTCAGGGAATGATGCCAAATAATGTTTGTCCCTTTGCTTTGCATTTTTATAGCTAGGTCTTTGAAGCTGAACTGGAGGAACTTCTTAGCCAATACTGTCTTCTCAAACCCAAAGTTTACAGTTGCAGAAGACACATTTTTTAGTGTCATGGCAACCAAGCAACCTATTACC-----TTAACTTTAGaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcactgacatgacactac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397338 560 + 72422247 ATACAAAGAGTAATACATCAAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGGGAGTAGCCTAATCAAACCTCCTTACTCTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCATGCAGACTAATAAAGCGCCACCATCATTTTATCTCTCAGTGAGGGGTAGTTTTAATGCTACTGCAGTGGTGGAAGCACTGGGCGTTGTCATCCACCCCTGAGGACAAGCAGCTTTGTTTTGGAATATGTATCTGTTATTGTGATGGAGCC----AATTTTCAGGGAATGATGCCAAATGATGTTTGTCCCTTTGCTTTACATTTTTATAGCTAGGTCTTTGAAGCTGGACTGGAGGAACTTCTTAGCCGATACTGTCTTCTCAAACCAAAAGTTTACAGTTGCGGAAGATACG-TTTTTAGTGTCATGGCAACCAAGCAACCTATTACC-----TTAACTTCAGaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaacctgaaactttttgagcactgacatgacactac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94509510 588 - 123690457 GTAGAAAGAGGAATACATCAAGGACTGTTCATCCTCATAGTTTGCCATTGATGGCTCATAGTTTGCCATTGATGGTGGAGAGTGTCAGAATTGGGGAGTAGCCCAATCAAAC---CTTACTCTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGAATGCAGACTAATAAAGCGCCACTGTCATTTTATCTATCAGTAAGGAGTAGCTTTAATGCTACTGCAGTGGTGGAAGCACTGGGCATTATCATCCACCCCTGGGGACCAGCAGCTTTGTTTTGGATCATGTATCTGTTATTGTGATGGAGCCATTTATTTTTCAGGGAATGATGCCAAATGATGTTTGTCCCTTTGCTTTACATTTTTATAGCTAGGACTTTGAAGCTGAACTGGAGGAACTTCCTAGCCAATACTATCTTCTCAAACCAAAAGTTTATAGTTGCAGAAGACACATTTTTTAGTGTCATGGCAACCAGGCAACCTATTATCTTAACttaaatttagaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcactgacatgacattac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044299 570 + 198365852 GTTCAAAAAGGAATACATCCAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGGGAGTAGCCTAATCAAACCTTCCTATTCTGCGTGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCATGCAGACTAATAAAGCGCCACCATCATTTTGTCTATAAGTAAGGAGTAGCTTTAATGCTACTGCAGTGGTGGAAGCCCTGGGCATTGTCGTCCACCCCTGGGGACCAGCAACTTTGTTTTGGATCACGTATCTGTTATTGTGAGGTAGCCATTTATTTTTCATGGAATGGTGCCAAATGATGTTTGTCCCTTTGCTTTACATTTTTCTAGCTAGGACTTTGAAGCTGAACTGGAGGAACTTCTTAGCCAATACTATCTTCTCAAACCAAAAATTTTTAGGTGCAGAAGACATGTTTTTTAGTGTCATGGCAACCAGGCAACCTGTTATCTTAACTTACATTTAGaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcactgacatgatactac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114136767 570 + 192294377 GTTCAAAAAGGAATACATCCAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGGGAGTAGCCTAATCAAACCTTCCTATTCTGCGTGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCATGCAGACTAATAAAGCGCCACCATCATTTTGTCTATAAGTAAGGAGTAGCTTTAATGCTACTGCAGTGGTGGAAGCCCTGGGCATTGTCGTCCACCCCTGGGGACCAGCAACTTTGTTTTGGATCATGTATCTGTTATTGTGAGGTAGCCATTTATTTTTCATGGAATGGTGCCAAATGATGTTTGTCCCTTTGCTTTACATTTTTCTAGCTAGGACTTTGAAGCTGAACTGGAGGAACTTCTTAGCCAATACTATCTTCTCAAACCAAAAATGTTTAGGTGCAGAAGACATGTTTTTTAGTGTCATGGCAACCAGGCAACCTGTTATCTTAACTTACATTTAGaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcactgacatgatactac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104183897 570 + 180432695 GTTCAAAAAGGAATACATCCAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGATGGTGGAGAGTGTCAGAATTGGGGAGTAGCCTAATCAAACCTTCCTATTGTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCATGCAGACTAATAAAGTGCCACCATCATTTTGTCTATAAGTAAGGAGTAGCTTTAATGCTACTGCAGTGGTGGAAGCCCTGGGCATTGTCGTCCACCCCTGGGGACCAGCAGCTTTGTTTTGGATCATGTATCTGTTATTGTGATGTAgccatttatttttcatggaaTGGTGCCAAATGATGTTTGTCcctttgctttacatttttatagcTAGGACTTTGAAGCTGAACTGGAGGAACTTCTTAGCCAATACTATCTTCTCAAACCAAAAATTTTTAGTTGCAGAAGACACGTTTTTTAGTGTCATGGCAACCAGGCAACCTGTTATCTTAACTTATATTTagaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcactgacatgatacTAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250315 570 + 127223203 GTTCAAAAAGGAATACATCAAGGACTTTTCATC---------------------CTCATAGTTTGCCAGTGACGGTGGAGAGTGTCAGAATTGGGGAGTAGCCTAATCAAACCTTCCTACTCTGCATGCAGTGGCAGACAGTCCCTTTGCTGTTCCTTTGGGGCATGCAGACTAATAAAACGCCACCATCATTTTGTCTATAAGTAAGGAGTAGCTTTAATGCTACTGCAGTGGTGGAAGCCCTGGGCATTGTCGTCCACCCCTGGGGACCAGCAGCTTTGTTTTGGATCATGTATCTGTTATTGTGATGTAGCCATTTATTTTTCATGGAATGGTGCCCAATGATGTTTGTCCCTTTGCTTTACATTTTTATAGCGAGGACTTTGAAGCTGAACTGGAGGAACTTCTTAGCCAATACTATCTTCTCAAACCAAAAATTTTTAGTTGCAGAAGACATGTCTTTTAGTGTCATGGCAACCAGGCAACCTGTTATCTTAACTTACATTTAGaggttgagcatccctaatctgaaaatctgaaatttgaaatgctccaaaatctgaaactttttgagcgctgacatgatactac i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22252361 2756 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=755.000000 s hg38.chrUn_GL000218v1 27744 1 + 161147 a s panTro4.chr2A 18556977 1 - 113622374 g i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397898 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510098 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s chlSab2.chr21 51250885 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s otoGar3.GL873524 22255117 1 - 47208961 a i otoGar3.GL873524 I 2756 I 11 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e papAnu2.chr3 104184467 0 + 180432695 C e macFas5.chr3 114137337 0 + 192294377 C e rheMac3.chr3 120044869 0 + 198365852 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=10121.000000 s hg38.chrUn_GL000218v1 27745 5 + 161147 tgtgg s panTro4.chr2A 18556978 5 - 113622374 tgtgg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397899 5 + 72422247 tgtgg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510099 5 - 123690457 tgtgc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044869 5 + 198365852 tgtgc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137337 5 + 192294377 tgtgc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184467 5 + 180432695 TGTGC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250886 5 + 127223203 tgtgc i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE944822v1 75611 7255 - 120423 I e otoGar3.GL873524 22255118 11 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=6860.000000 s hg38.chrUn_GL000218v1 27750 6 + 161147 -att-----------ttg s panTro4.chr2A 18556983 5 - 113622374 -att-----------tt- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397904 5 + 72422247 -att-----------tt- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510104 5 - 123690457 -att-----------tt- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044874 5 + 198365852 -att-----------tt- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137342 5 + 192294377 -att-----------tt- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184472 5 + 180432695 -ATT-----------TT- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250891 5 + 127223203 -att-----------tt- i chlSab2.chr21 C 0 C 0 s tarSyr2.KE940243v1 17178 17 + 445202 aattccacagctgactt- i tarSyr2.KE940243v1 I 7255 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e otoGar3.GL873524 22255118 11 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=-2745.000000 s hg38.chrUn_GL000218v1 27756 4 + 161147 atgg--- s panTro4.chr2A 18556988 1 - 113622374 ---g--- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397909 1 + 72422247 ---g--- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510109 1 - 123690457 ---g--- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044879 1 + 198365852 ---g--- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137347 1 + 192294377 ---g--- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184477 1 + 180432695 ---G--- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250896 1 + 127223203 ---g--- i chlSab2.chr21 C 0 C 0 s tarSyr2.KE940243v1 17195 1 + 445202 ---c--- i tarSyr2.KE940243v1 C 0 C 0 s otoGar3.GL873524 22255129 4 - 47208961 ---gtga i otoGar3.GL873524 I 11 I 1032 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=8548.000000 s hg38.chrUn_GL000218v1 27760 4 + 161147 atgt------- s panTro4.chr2A 18556989 4 - 113622374 atgt------- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397910 4 + 72422247 atgt------- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510110 4 - 123690457 atgt------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044880 4 + 198365852 atgt------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137348 4 + 192294377 atgt------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184478 4 + 180432695 ATGT------- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250897 4 + 127223203 atgt------- i chlSab2.chr21 C 0 C 0 s tarSyr2.KE940243v1 17196 11 + 445202 atgtgtcagat i tarSyr2.KE940243v1 C 0 I 139 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=353899.000000 s hg38.chrUn_GL000218v1 27764 156 + 161147 cccagtcaaagtgcaggtgaacaacacacagtttatttgatgttctctagtggaaaaagaccctctcagcccccttcagctgcagtataacttttctacacatgctcagatttccccatgcaagcacc-cacacaaagggtcacagaatggcacatg s panTro4.chr2A 18556993 156 - 113622374 cccagtcaaaatgcaggtgtacaacacacagattatttgacgttccgtagtgaaaaaagaccctctcagcccccttcagctgcagtataacttgtctacatgtgctcaaatttccccatgcaagcaca-cccacaaagggtcacagaatggcacatg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5397914 156 + 72422247 cccagtcaaaatgcaggtgtacaacacacagtttatttgacgttctctagtgaaaaaagaccctttcagcccccttcagctgcagtataacttttctacacgtgctcagatttccccatgcaagcacg-cccacaaaaggtcacagaatggcacacg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510114 157 - 123690457 cacagtcaaaatgcaggtgtaaaacacatagtttatttggcgttccctagggaaaaaagaccctctcagcccgcttcagctgcagtataacctttctacacatgcccagatttccccgtgcaagcacgccccacaaagggtaatagaatggcacatg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120044884 156 + 198365852 cacagtcaaaatgcagatgtaaaacacacagtttatttggcatgccctaggaaaaaaagaccttctcagcccccttcagctgcagtataacttttctacacatgcccagatttcctcgtgcaagcatg-cccacaaaggataatagaatggcacatg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137352 156 + 192294377 cacagtcaaaatgcaggtgtaaaacacacagtttatttggcatgccctaggaaaaaaagaccctctcagcccccttcagctgcagtataacttttctacacatgcccagatttcctcgtgcaagcatg-cccacaaaggataatagaatggcacatg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184482 156 + 180432695 CACAGTCAAAATGCAGATGTAAAACACACAGTTTATTTGGCGTGCCCTAGGaaaaaaaGACCCTCTCAGCCCCCTTCAGCTGCAGTATAACTTTTCTACACATGCCCAGATTTCCCCGTGCAAGCATG-CCCACAAAGGGTAATAGAATGGCACATG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51250901 156 + 127223203 cacagtcaaaatgcaggtgtaaaacacacagtttatttggcatgccctagggaaaaaagaccctttcagcccccttcagctgcagtataacttttctacacatgcccagatttccccgtgcaagcatg-cccacaaagggtaatagaatggcacatg i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17207 139 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=104503.000000 s hg38.chrUn_GL000218v1 27920 54 + 161147 tgcaagctggacatgccaatggca-------ggatccccacagatgggacctaagtgcatt s panTro4.chr2A 18557149 54 - 113622374 tgcaagctggacacgccaatggca-------ggatccccacagatgggacataagtgcatt i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398070 54 + 72422247 tgcaagctggacacgcccatggca-------ggatccccacagatgggacctaagtgcatt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510271 54 - 123690457 tgcaagctggacacgccattggca-------ggatccccacagatggcacctatgtgcatt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045040 61 + 198365852 tgcaagctggacacgccaatggcaggatccgggatccccacagatgggacctctgcgcatt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137508 61 + 192294377 tgcaagctggacacgccaatggcaggatccaggatccccacagatgggacccctgcgcatt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184638 61 + 180432695 TGCAAGCTGGACACGCCAATGGCAGGATCCAGGATCCCCACAGATGGGACCTCTGCGCATT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251057 61 + 127223203 tgcaagctggacacaccaatggcaggatccaggatccccacagataggacctctgcgcatt i chlSab2.chr21 C 0 C 0 s tarSyr2.KE940243v1 17346 5 + 445202 -------tgagt------------------------------------------------- i tarSyr2.KE940243v1 I 139 I 17 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=41287.000000 s hg38.chrUn_GL000218v1 27974 17 + 161147 actcattgtgtattttt s panTro4.chr2A 18557203 17 - 113622374 acccgttgtgtattttt i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398124 17 + 72422247 acccgttgtgtattttt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510325 17 - 123690457 atccattgtgtattttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045101 17 + 198365852 acccattgtgtattttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137569 17 + 192294377 acccattgtgtattttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184699 17 + 180432695 ACCCATTgtgtattttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251118 17 + 127223203 acccattgtgtattttt i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17351 17 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=3600.000000 s hg38.chrUn_GL000218v1 27991 1 + 161147 g s panTro4.chr2A 18557220 1 - 113622374 g i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398141 1 + 72422247 g i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510342 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045118 1 + 198365852 g i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137586 1 + 192294377 g i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184716 1 + 180432695 g i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251135 1 + 127223203 g i chlSab2.chr21 C 0 C 0 s tarSyr2.KE940243v1 17368 1 + 445202 g i tarSyr2.KE940243v1 I 17 I 6486 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=686646.000000 s hg38.chrUn_GL000218v1 27992 311 + 161147 cttattctctgctctgtggtgttaacatactgaaaatgtcaataagacctgtaggt-atccctgcgagcagcaatgataaggaaaagtagaaacacttagaacacagaaagtcaagctgttggagaaattggactgtagtgtaaAGGtatagatgacatggtgaaaatgtgtgatagagatattgaagatattgaaggactagagctacctgcattcataacagaacaagaggtcatgtcagtttataaaattaaagagagacttccaagacaaaagcccttgataatgaggcagatgactctggagaaaca s panTro4.chr2A 18557221 310 - 113622374 cttattctctgctctgtggtattaacatactgaaaatgtcaataaggcctgtagat-atccctacgagcggcaatgataaggaaaagtagaatcgcttataacacagaaagtcaagctgtcggagaaattggactgtagtgtaaAGGtatggatgacatggtgaaaatgtgtgatagagatattgaagatattgaaggactagagctacctgcattcataacagaacaagaggtcacgtcagtttataaaattaaagagagacttccaagacaaaagccg-tgatgatgaggcagatgactctggagaaaca i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398142 308 + 72422247 cttattctctgctctgtggtgttaacatactgaaaatgtcaataaggcctgtagataatccctacaagcagcaatgataaggcaaagtagaaacacttgtaacacagaaagtcaagctgttggagaaattggactgtagtgtaaAGGtatggatgacatggtgaaaatgtgtgatagagatattgaagatactgaaggactagagctacctgcattcataagagaacaagaggtcatgtcagtttataaaatt----agagacttccaagacaaaagccattgataatgaggcagatgactctggagaaaca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510343 302 - 123690457 cttattttctgctctgtggtgttaagattctgaaaatgtgaaaaagacctgtagat-atttctgtgagcagcagtgataaggaaaagtagaaacacttataacacagaaagtcaagctgtaggagaaactggactgtagtgtaaAGGtatagatgacatggtgaaaatgtgtgatagagatat---------tgaaggactagagctacctgcattcataatagaacaagaggtcatgtcagtttataaaatcaaagagagacttccaagacaaaagccgttgttaatgaagcagatgactctggagaaaca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045119 298 + 198365852 cttattttctgctctgtggtgttaagatactgaaaatgtcaaaaagacctgtagat-atttctttgagcagcaatgataaggaaaagtagaaac----ataacacagaaagtcaagctataggagaaattggactgtagtgtaaAGGTTtagattacatgatgaaaatgtgtgatagagatat---------tgaaaggctagagctacctgcattcataacagaacaagaggtcatgccagtctataaaatcaaagagagacttccaagacagaagccgttgttaatgaggcagatgactctggagaaaca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137587 298 + 192294377 cttattttctgctctgtggtgttaagatactgaaaatgtcaaaaagacctgtagat-atttctttgagcagcaatgataaggaaaagtagaaac----ataacacagaaagtcaagctataggagaaattggactgtagtgtaaAGGTTtagattacatgatgaaaatgtgtgatagagatat---------tgaaaggctagagctacctgcattcataacagaacaagaggtcatgccagtctataaaatcaaagagagacttccaagacagaagccgttgttaatgaggcagatgactctggagaaaca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104184717 298 + 180432695 cttattttctgctCTGTGGTGTTAAGAtactgaaaatgtcaaaaagacCTGTAGAT-ATTTCTTTGAGCAGCAATGATAAGGAAAAGTAGAAAC----ATAACACAGAAAGTCAAGCTATAGGAGAAATTGGACTGTAGTGTAAAGGTTTAGATTACATGATGAAAATGTGTGATAGAGATAT---------TGAAAGGCTAGAGCTACCTGCATTCATAACAGAACAAGAGGTCATGTCAGTCTATAAAATCAAAGAGAGACTTCCAAGACAGAAGCCGTTGTTAATGAGGCAGATGACTCTGGAGAAACA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251136 298 + 127223203 cttattttctgctctgtggtgttaagatactgaaaatgtcaaaaagacctgtagat-atttctttgagcagcaatggcaaggaaaagtagaaac----ataacacagaaagtcaagctataggagaaattggactgtagtgtaaAGGTTtagattacatgatgaaaatgtgtgatagagatat---------tgaaaggctagagctacctgcattcataacagaacaagaggtcatgtcagtttataagatcaaagagagacttccaagacagaagccgttgttaatgaggcagatgactctggagaaaca i chlSab2.chr21 C 0 I 50 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=4389.000000 s hg38.chrUn_GL000218v1 28303 3 + 161147 -tta s panTro4.chr2A 18557531 3 - 113622374 -tta i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398450 3 + 72422247 -tta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510645 3 - 123690457 -ttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045417 4 + 198365852 ctta i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137885 4 + 192294377 ctta i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185015 4 + 180432695 CTTA i papAnu2.chr3 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6186843 3896 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51251434 50 + 127223203 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=54.000000 s hg38.chrUn_GL000218v1 28306 1 + 161147 t s panTro4.chr2A 18557534 1 - 113622374 t i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398453 1 + 72422247 t i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510648 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s saiBol1.JH378107 6190739 1 - 58292249 t i saiBol1.JH378107 I 3896 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e calJac3.chr8 49642346 0 + 128169293 C e chlSab2.chr21 51251434 50 + 127223203 I e papAnu2.chr3 104185019 0 + 180432695 C e macFas5.chr3 114137889 0 + 192294377 C e rheMac3.chr3 120045421 0 + 198365852 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=-387.000000 s hg38.chrUn_GL000218v1 28307 1 + 161147 a s panTro4.chr2A 18557535 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398454 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510649 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045421 1 + 198365852 c i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137889 1 + 192294377 c i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185019 1 + 180432695 C i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251484 1 + 127223203 a i chlSab2.chr21 I 50 C 0 s saiBol1.JH378107 6190740 1 - 58292249 a i saiBol1.JH378107 C 0 I 85 e micMur1.scaffold_1595 127182 851 - 319779 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=193483.000000 s hg38.chrUn_GL000218v1 28308 86 + 161147 aaaagccatctggcagaatgcctcctcagcctcagaggactcacctcc-tagttgctcaact-c--ctgatatttcttctcacctaaaaa s panTro4.chr2A 18557536 89 - 113622374 aaaagccatctggcagaatgcctcctcagcctcagaggactcacctccttagttgctcagct-cttctgatatttcttctcacctaaaaa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398455 88 + 72422247 aaaagtcatctggcagaatgcctcctcagcctcagagggctcacctcc-tagttgctcaact-cttctgatagttcttctcacctaaaaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510650 89 - 123690457 aaaagtcatctggctgaatgcctcttcaatctcagaggacccgcttcc-tagtcgctcagctgcttctgatatttcttctcatctgaaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045422 89 + 198365852 aaaagtcatttggccaagtgcctcctcaacctcagaggacccgcttcc-tagttgctcagctgcttctgatatttcttctcacctaaaaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137890 89 + 192294377 aaaagtcatttggccaagtgcctcctcaacctcagaggacccgcttcc-tagttgctcagctgcttctgatatttcttctcacctaaaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185020 89 + 180432695 AAAAGTCATTTGGTCAAGTGCCTCCTCAACCTCAGAGGACCCGCTTCC-TAGTTGCTCAGCTGCTTCTGATATTTCTTCTcacctaaaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251485 89 + 127223203 aaaagtcatttggccgagtgcctcctcaacctcagaggacccgcttcc-tagttgctcagctgcttctgatatttcttctcacctaaaaa i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6190741 85 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=2300.000000 s hg38.chrUn_GL000218v1 28394 1 + 161147 a s panTro4.chr2A 18557625 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398543 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510739 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045511 1 + 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137979 1 + 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185109 1 + 180432695 a i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251574 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s saiBol1.JH378107 6190826 1 - 58292249 g i saiBol1.JH378107 I 85 I 634 e micMur1.scaffold_1595 127182 851 - 319779 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=374710.000000 s hg38.chrUn_GL000218v1 28395 172 + 161147 ag---aaaaaaaaaatacaatgtacagtaaccttttaatcaaaacgcagccttgtaggtggagcctgaaagcttgccattgtttatacagctgtttaacagctgatgcaggtattctggtgatgctactgtgttgcttatta-ttttttactgtattaatgtcatgtcata-ttttt s panTro4.chr2A 18557626 171 - 113622374 ag-----aagaaaaatacaatgtacagtaaccgtttaatcaaaacacaaccttgtaggtggagcctgaaagcctgccattgtttgtacagctgtttaacagctgatgcaggtattctggtgatgctactgtgttgcttatta-ttttttactgtattaatggcatgccatatttttt i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398544 171 + 72422247 ag-----aaaaaaaatacaatgtacagtgaccttttaatcaaaacacatctttgtaggtggagcctgaaaacttgccattgtttgtacagctgtttaacagctgatgcaggtattctggtgatgctactgtgttgcttatta-tttttaactgtattaatggtatgtcatatttttt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510740 174 - 123690457 gg---aaaaaaaaaatgcagtgtatagtaaccttttaatcaaaacacagcattgtaggtggaatctgaaagcctgccattgtttgtatagctgtttaacagctgatgcaggtattctggtgattctgctatgctacttattactttcttactgtattaatggtatgtcatgtttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045512 175 + 198365852 gg--aaaaaaaaagatacagtgtacagtaaccttttaatcaaaacacagcattgtcgctggagtctgaaagcctgccattgtttgtacagctgtttaactgctgatacaggtattctggtgatactactatgctacttattattttcttactgtattaatggtaggtcatatttttt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114137980 175 + 192294377 gg--aaaaaaaaagatacagtgtacagtaaccttttaatcaaaacacagcattgtcggtggagtctgaaagcctgccattgtttgtacagctgtttaactgctgatacaggtattctggtgatactactatgctacttattattttcttactgtattaatggtaggtcatatttttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185110 175 + 180432695 gg--aaaaaaaaagatacagtgtACAGTAACCTTTTAATCAAAACACAGCATTGTCGGTGGAGTCTGAAAGCCGGCCATTGTTTGTACAGCTGTTTAACTGCTTATACAGGTATTCTGGTGATACTACTATGCtacttattattttcttactgtattAATGGTAGGTCATATTTTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251575 177 + 127223203 ggaaaaaaaaaaagatacagtgtacagtaaccttttaatcaaaacacagcattgtcggtggagtctgaaagcctgccattgtttgtacagctgtttaactgctgatacaggtattctggtgatactactatgctacttattattttcttactgtattaatggtaggtcatatttttt i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 127182 851 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=2548.000000 s hg38.chrUn_GL000218v1 28567 1 + 161147 a s panTro4.chr2A 18557797 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398715 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s rheMac3.chr3 120045687 1 + 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138155 1 + 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185285 1 + 180432695 A i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251752 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s micMur1.scaffold_1595 128033 1 - 319779 a i micMur1.scaffold_1595 I 851 I 252 e saiBol1.JH378107 6190827 634 - 58292249 I e nomLeu3.chr11 94510914 0 - 123690457 C e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=200346.000000 s hg38.chrUn_GL000218v1 28568 105 + 161147 cttatgtgtgaataattgtgtgaaaatgattgctcatcagtagcatataaattcagagtcagaaatgatggtcagtgacatcagacagccacagattttccacat s panTro4.chr2A 18557798 102 - 113622374 cttctgtgtgaataagtgtgtgaaaatgattgctcatcagtagcatataaattcggagtcagaa---atggtcagtgatgtcagacagccacagatgttccacat i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398716 101 + 72422247 cttatgtgtgaataagtgtgtgaaaatgattgctcatcagtagcatataaatccagagtcagaaatgatggtcagtgatgt----cagccacagattttccacat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94510914 94 - 123690457 -----------ataagtatatgaaaatgattgctcatcagtagcatataaattcaaagtcaggaatgatggtcagtgatgtcaaacggccacagattttccacat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045688 103 + 198365852 cttacgtatgaataagtgtataaaaatgattgttctttagtagcatataaattc--agtcaggaatgatgggcaatgatggcaaacagccacagattttccacat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138156 103 + 192294377 cttacgtatgaataagtgtataaaaatgattgttctttagtagcatataaattc--agtcaggaatgatgggcaatgatggcaaacagccacagattttccacat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185286 103 + 180432695 CCTACGTATGAATAAGTGTATAAAAATGATTGTTCTTTAGTAGCATATAAATTC--AGTCAGGAATGATGGTCAATGATGGCAAACAGCCACAGATTTTCCACAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251753 103 + 127223203 cttatgtatgaataagtgtatagaaatgatggttctttagtagc--gaaaattcagagtcaggaatgatggtcaatgatggcaaacagccacagattttccacat i chlSab2.chr21 C 0 C 0 e micMur1.scaffold_1595 128034 252 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e calJac3.chr8 49642346 0 + 128169293 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=515326.000000 s hg38.chrUn_GL000218v1 28673 174 + 161147 ggaagctgagatagtgacacctttgctttctgatggttccatgtacacaaactttgtttcattcacaaaattatttgaaatattatataaaattacctttaggctatgtgtataagatatatgaaacataagtgaatttcacgtttagacttggatctcatcgccaagatacct s panTro4.chr2A 18557900 173 - 113622374 ggtagctgagatagtgacacctttgc-ttctgatggttccgtgtacacaaactttgtttcctgcacaaaattatttgaaatattatataaaattacctttaggctatgtgtataagatatatgaaacataagtgaatttcacgtttagacttgggtctcatccccaagatacct i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398817 174 + 72422247 ggtagctgagatagtgacacctttgctttctgatggttccgtgtacacaaactttgtttcatgcacaaaattatttgaaattttatataaaattagctttaggctatgtgtataagatatgtgaaacatgagtgaatttcacgtttagacttgggtctcatccccaagatatct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511008 174 - 123690457 ggtagctgagatagtgacccctttgctttctgatggttccatgtatgcaaactttgtttcatgcacaaaattatttgaaatattatataaaattacctttaggttttgtgtataagatatatgaaacataaatgaatttcatgtttagacttgggtctcatgcccaagatatct i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045791 174 + 198365852 ggtagctgagatagtgatacctttgctttctgatggttccatgttcataaactttgtttcatgcacagaattatttgaaatattatctaaaattacctgtaggctatgtgtataagatatatgaaacataaatgaatttcatgtttagacttgagtctcatccccaagatatct i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138259 174 + 192294377 ggtagctgagatagtgatacctttgctttctgatggttccatgtacacaaactttgtttcatgcacagaattatttgaaatattatctaaaattacctgtaggctatgtgtataagatatatgaaacataaatgaatttcatgtttagacttgagtctcatccccaagatatct i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185389 174 + 180432695 GGTAGCTGAGATAGTGatacctttgctttctgatggttccatgtacacaaactttgtttcatgcacagaattatttgaaatattatataaaattacctgtaggctatgtgtataagatatatgaaacataaatgaatttcatgtttagacttgggtctcatccccaagatatct i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51251856 174 + 127223203 ggtagctgagatagtgacacctttgctttctgatggttccatgtacacaaactttgtttcatgcacagaattatttgaaatattatataaaattacctttaggctatgtgtataagctatatgaaacataaatgaatttcatgtttagacttgggtctcatccccaagatatct i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642346 171 + 128169293 ggtagctgagatagtgacacctttgctttctgatggttccgtgtacacaaactctgcttcatgcacaagattatttgaaatgtt-tataaaattacttttaggtgatgtgtctaagatatatgaaaca--aatgaatttcgtgtttggacttgggtctcatccccgagatatct i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 128034 252 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=10737.000000 s hg38.chrUn_GL000218v1 28847 3 + 161147 cac s panTro4.chr2A 18558073 3 - 113622374 cac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398991 3 + 72422247 cac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511182 3 - 123690457 cac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045965 3 + 198365852 cac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138433 3 + 192294377 cac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185563 3 + 180432695 cac i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252030 3 + 127223203 cac i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642517 3 + 128169293 cac i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 128286 3 - 319779 tat i micMur1.scaffold_1595 I 252 I 43 e saiBol1.JH378107 6190827 634 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1107.000000 s hg38.chrUn_GL000218v1 28850 1 + 161147 g s panTro4.chr2A 18558076 1 - 113622374 g i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398994 1 + 72422247 g i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511185 1 - 123690457 a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045968 1 + 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138436 1 + 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185566 1 + 180432695 a i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252033 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642520 1 + 128169293 a i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 128289 43 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22255133 1032 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=8007.000000 s hg38.chrUn_GL000218v1 28851 3 + 161147 tag s panTro4.chr2A 18558077 3 - 113622374 tag i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398995 3 + 72422247 tag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511186 3 - 123690457 tat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045969 3 + 198365852 tat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138437 3 + 192294377 tat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185567 3 + 180432695 tat i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252034 3 + 127223203 tat i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642521 3 + 128169293 tat i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22256165 3 - 47208961 tat i otoGar3.GL873524 I 1032 I 1854 e micMur1.scaffold_1595 128289 43 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=41694.000000 s hg38.chrUn_GL000218v1 28854 25 + 161147 atgcaaata---taaaatcc-aaaaaaaa s panTro4.chr2A 18558080 29 - 113622374 atgcaaatattctaaaatccaaaaaaaaa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5398998 29 + 72422247 atgcaaatattctaaaatccaaaaaaaaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511189 20 - 123690457 atgcaaatattccaaagtcc--------- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045972 20 + 198365852 atgcaaatattccaaaatcc--------- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138440 20 + 192294377 atgcaaatattccaaaatcc--------- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185570 20 + 180432695 atgcaaatattccaaaatcc--------- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252037 20 + 127223203 atgcaaatattccaaaatcc--------- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642524 28 + 128169293 atgcagatattccagaatcaaataaaac- i calJac3.chr8 C 0 I 2 e micMur1.scaffold_1595 128289 43 - 319779 I e saiBol1.JH378107 6190827 634 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=363.000000 s hg38.chrUn_GL000218v1 28879 2 + 161147 at s panTro4.chr2A 18558109 2 - 113622374 at i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5399027 2 + 72422247 at i ponAbe2.chrUn C 0 C 0 s saiBol1.JH378107 6191461 1 - 58292249 -c i saiBol1.JH378107 I 634 I 2409 e micMur1.scaffold_1595 128289 43 - 319779 I e nomLeu3.chr11 94511209 0 - 123690457 C e calJac3.chr8 49642552 2 + 128169293 I e chlSab2.chr21 51252057 0 + 127223203 C e papAnu2.chr3 104185590 0 + 180432695 C e macFas5.chr3 114138460 0 + 192294377 C e rheMac3.chr3 120045992 0 + 198365852 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=674.000000 s hg38.chrUn_GL000218v1 28881 3 + 161147 tcc s panTro4.chr2A 18558111 3 - 113622374 tcc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5399029 3 + 72422247 tcc i ponAbe2.chrUn C 0 C 0 s calJac3.chr8 49642554 3 + 128169293 aac i calJac3.chr8 I 2 C 0 s micMur1.scaffold_1595 128332 3 - 319779 tct i micMur1.scaffold_1595 I 43 I 758 e saiBol1.JH378107 6191462 2409 - 58292249 I e nomLeu3.chr11 94511209 0 - 123690457 C e chlSab2.chr21 51252057 0 + 127223203 C e papAnu2.chr3 104185590 0 + 180432695 C e macFas5.chr3 114138460 0 + 192294377 C e rheMac3.chr3 120045992 0 + 198365852 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=2139857.000000 s hg38.chrUn_GL000218v1 28884 750 + 161147 gaaaccctaaacacttctggttccaaacatttcagataagggatactcaatctgCATATATA-AAATATTTATGTATCACATACATAGTATGTATATAATATGAATTTCCATTCCTCTACAGGTTACTATTCTGGTACATTCCCATTATATTCTGTTTATCAGACTGCAACTAAAACTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAATTATGAGTTGAAGCAAACCCTAGTTTGATAATGCTATGATTCTCCTAAATCACCAAAGTGCATGAAATGATTTTAAGGCTCCAGAAATACTGAAGCAACTTTGTGATAAAAAATTATTAGTGGATGCACAAGGAGTCTATAATGTTTTGGTTTTGCTATTGCTTCCTAAGGTGCAGTACCAGTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTCTTTTACTGGATTCTGCCAATAAGAAAGTGTCCCTGGACAGAGATACGTAAGGAGTCAGACCTTTGTTTAAAGCAGTGACAGAAGATGGATTTTTGGCTGTGCGTTCAGAAGCTAAAGGTAATAGTAAATTTATGTATAGATTTTCATTATTGTCTTGGTCGTGTGTTTTCTTTTAAATTATATCTGAAAATCTCTT----AGCAATCCAGAATTTTACAAGTGACTAATTAAGTTGTGAGTTCTTAC s panTro4.chr2A 18558114 747 - 113622374 aaaacccaaaatacttctggttccaaacatttcagagaagggatactcaatctgCATATATATAAATATTTATGTATCACATACATAGTATGTATATAATATGCATTTCCATTCCTCTACAGGTTGCTATTCTGGTACATTCCCATTATATTCTGTTTATGAGACTGCAACTAAAACTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAATTATGAATTGAAGCAAACCCTAGTTTGATAATGCTATGATTCTCCTAAATCACCAAAGTGCATGAAATGATTTTAGAGCTCCAGAAATACTGAAGCAACTTTGCAATAAAAAATTATTAGTGAATGCACAAGGAGTCTATAACGTTTTGGTTTTGCTATTGCTTCCTAAGGTGCAACACTATTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTGTGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATTCCGCCAATAAGAAAGTGTTCTTGGGCAGAGATACATGAGGAGTCAGACCTTCGTTTAAAGCAGTGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGATAATAGTAAATTTATCTATAGATTTTCATTATTGTCTTGGTCGTGTGTTTTCTTTTAAATTCTATTTGAAAATCTCTT----AGCAATCCAGAATTTTACAAGTGAC----TGAGTTATGAGTTCTTAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5399032 751 + 72422247 aaaacccaaaacacttctggttccaaacatttcagataagagatattcaatttgCCTATATATAAATATTTGTGTATCACATACATGGTACGTATATAATATGCATTTCCATTGCTCTACAGGTTGCTATTCTGGTACATTCCCATTATATTCTGTTTATCAGACTGCAACTAAAACTTTCATGGATTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAATTATGAGTTGAAGCAAACCCTAGTTTGATAATGCTATGATTCTTCTAAATCACGAAAGTGCATGAAATGATTTTAGAGCTCCAGAAATACTGAAGCAACTTTGCAATAAAAAATTATTAGTGAATGCACAAGGAGTCTATAACGTTTTGGTTTTGCTATTGCTTCCTAAGGTGCAACACTATTTTGAATTTGAATACCAGATCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTAAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTTCTGGATTCTGTCAATAAGAAAGTGTTCCTGGGCAGAGATACATAAGGAGTCAGACCTTTGTTTAAAGCAGTGACAGAAGATGGATTTTTGGCTGTATGTTCAAAAGCTAAAGGTAATAGTAAATTTATCTATAGATTGTCTTTATTGTCTTGGTCGTGTGTTTTCTTTTAAATTCTATTTGAAAATCTCTT----AGCAATCCAGAATTTTACAAGTGACTAATTAAGTCATGAGTTCTTAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511209 745 - 123690457 aaaacacaaaacacttctggttccaaacatttcagataagggatactca-----Catatata-ctatgtatatatattacatacatagtatgtatataatatacatttctatCCCTCCACAGGTTACTGTTCTGGCACATTCCCATTATATTCTGTTTATCAGACTGCAACTAAAATTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAA-TATGAGTTGAAGCAAACCCTAGTTTAATAATGCTATGATTCTCCTAAATCACCAAAGTGCATGAAAGGATTATAGAGCT-CAGAAATACTGAAGCATCTTTGCAATAAAAAATTATTAGTGGATGTACAACGAGTC--TAACATTTTGGTTTTGCTGTTGCTTCCTAAGATGCAACAGCATTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATATGGAGTCAGACCTTTGTTTAAAGCAATTACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTTTTCTATACATTTTCATTATTGTCTTGGTTGTATGTTTTCTCTTAAATTATATTTGAAAAGCTCTTAGAGAGCAATACAGAATTTTACAAGTGACTAATTAAGTTATGAGTGTTTAC i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120045992 739 + 198365852 aaaacac--aacacttctggttccaaacatttcagataagggagactcaatctgAATATATA----------TGTATTACATACATAGTATGTATACAATATGCATTTTCATCCCTCCACAGGTTACTATTCTGGCACATTCCCATTATATTCTCTTTCTCAGACTGCAACTAAAATTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAT-TATGAGTTGAAGCAAACCCTAGTTTGATAATGCTGTGATTCTCCTAAATCACCAAAGTGCATGAAAGGATTATAGAGCT-CAGAAATACTGAAGCAACTTGGCAATAAGAAATTATTAGTGAATGTACAAGGAATC--TAACATTTTGGTTTTGCTATTGCTTCATAAGATGCAACGCCATTTTGAATTTGAATACCAGACCAACGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATATGGAGTCAGACCTTTGTTTAAAGCAATGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTTTTCTATAGACGTTCATTATTGTCTTGGTTGTATGTTTGCTTTTAAATTATATTTGAAAATCTCTTAGAGAGCAATCCAGAATTTTACAAGTGACTAATTAAGTTATGAGTCTTTAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114138460 739 + 192294377 aaaacac--aacacttctggttccaaacatttcagataagggagactcaatctgAATATATA----------TGTATTACATACATAGTATGTATACAATATGCATTTTCATCCCTCCACAGGTTACTATTCTGGCACATTCCCATTATATTCTGTTTCTCAGACTGCAACTAAAATTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAT-TATGAGTTGAAGCAAACCCTAGTTTGATAATGCTGTGATTCTCCTAAATCACCAAAGTGCATGAAAGGATTATAGAGCT-CAGAAATACTGAAGCAACTTGGCAATAAGAAATTATTAGTGAATGTACAAGGAATC--TAACATTTTGGTTTTGCTATTGCTTCATAAGATGCAACGCCATTTTGAATTTGAATACCAGACCAACGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATATGGAGTCAGACCTTTGTTTAAAGCAATGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTTTTCTATAGACGTTCATTATTGTCTTGGTTGTATGTTTGCTTTTAAATTATATTTGAAAATCTCTTAGAGAGCAATCCAGAATTTTACAAGTGACTAATTAAGTTATGAGTCTTTAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104185590 739 + 180432695 aaaacac--aacacttctggttccaaacatttcagataagggagaCTCAAtctgaatatata----------tgtattacatacataGTATGTATACAATATGCATTTTCATCCCTCCATAGGTTACTATTCTGGCACATTGCCATTATATTCTGTTTCTCAGACTGCAACTAAAATTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAT-TATGAGTTGAAGCAAACCCTAGTTTGATAATGCTGTGATTCTCCTAAATCACCAAAGTGCATGAAAGGATTATAGAGCT-CAGAAATACTGAAGCAACTTGGCAATAAGAAATTATTAGTGAATGTACAAGGAATC--TAACATTTTGGTTTTGCTATTGCTTCATAAGATGCAACGCCATTTTGAATTTGAATACCAGACCAACGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGtgtgtttgcatttgttttaCTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATATGGAGTCAGACCTTTGTTTAAAGCAATGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTCTTCTATAGACGTTCCTTATTGTCTTGGTTGtatgtttgcttttaaattacatttgaaaatctCTTAGAGAGCAATCCAGAATTTTACAAGTGACTAATTAAGTTATGAgtctttaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252057 739 + 127223203 aaaacac--aacacttctggttccaaacatttcagataagggagactcaatctgAatatata----------tgtattacatacatagtatgtatataatatGCATTTCCATCCCTCCACAGGTTACTGTTCTGGCACATTCCCATTATATTCTGTTTATCAGACTGCAACTAAAATTTTCATGGGTTCAGCTTTATGT----------------------TGA-ACAGAATTTGCAGAT-TATGAGTTGAAGCAAACCCTAGTTTGATAATGCTGTGATTCTCTTAAATCACCAAAGTGCATGAAAGGATTATAGAGCT-CAGAAATACTGAAGCAACTTTGTGATAAAAAATTATTAGTGAATGTACAAGGAATC--TAACATTTTGGTTTTGCTATTGCCTCGTAAGATGCAACACCATTTTGAATTTGAATACCAGACCAACGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATACGGAGTCAGACCTTTGTTTAAAGCAATGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTTTTCTGTAGACTTTCATTATTGTCTTGGTTGTATGTTTTCTTTTAAATTATATTTGAAAATCTCTTAGAGAGCAATCCAGAATTTTACAAGTGACTAATTAAGTTATGAGTCTTTAA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49642557 764 + 128169293 aaaacctaaaacacttctggttctaaacatttcagataaggaatactcaaTATGCATATATATATAAATATATGTATTACATACATGGTGTGTGTATAATATGCATTTCCATCCCTTCACAGGTTACAATTCTGATACATTCCCATTACATTCTGTTTATCAGACTGCAACCAAAATTTTCATGGGTTCAGCTTTATGTAATGAAAATTTTAGTTGCAGTCTGATAAAGAATTTGCAGAATTATAAGCTGAAACAAACCCTAATTTGATAATGCTGTGATTTTCCTAAATCACCAAAGTGC----AATAATTGTAGAGCT-C--AAATACTGAAGCAACTTGGCAATAA-AAATTATTAGTGAATGCACAAGGAGTC--TAACATTTTGGTTTTGCTATTGCTTTCTAAGATGCAGCAGGATTTTGGATTTGAATACCAGACCAACGTGGATGGTGAGATAATCCTTCATCTTTATGACAAAGGCGGAATTGAGCAAACAGTTTCTATGTTGGATGGTGTGTTTGCATTTATTCTACTGGATACTGCCAATAAGAAAGTGTTCCTGGGCAGAGATACATATGGAGTCAGACCTTTGTTTAAAACAATGACAGAAGATGGATTTTTGGCTGTATGTTCAGAAGCTAAAGGTAATAATAAATTTCTCTATAGATTTTCATTATTGTCTTGGTTGTGTGTTTTCTTTTAAGTTATATTTGAAAATCTCTTAGAGAGCAATCCAGAATTTTACAAGTGAC----TAAGTTATGAGTCCTTAC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 128335 758 - 319779 I e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=2404.000000 s hg38.chrUn_GL000218v1 29634 6 + 161147 CT--------TTTT s panTro4.chr2A 18558861 6 - 113622374 CT--------TTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5399783 6 + 72422247 CT--------TTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511954 6 - 123690457 CT--------TTTT i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120046731 12 + 198365852 TC--TTTTTTTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139199 14 + 192294377 CCTTTTTTTTTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104186329 12 + 180432695 cc--tttttttttt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252796 9 + 127223203 CC-----TTTTTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643321 7 + 128169293 CT-------TTTCT i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129093 6 - 319779 --------TTTTTT i micMur1.scaffold_1595 I 758 I 140 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1065696.000000 s hg38.chrUn_GL000218v1 29640 371 + 161147 AAAAAAAA-CAGAGTAGTTTTACTCTCCTTTTCAGCACTTAAATTCCGTAATCCTTGAAGGATGGGTCTTTAGTGTAGTCATTTA-TTTTTGGTGTGCTAATATGCTCTGCATATAGCTTGATCATAAGTGCAGTTTTAAGTTTTCCTGTGTCATACTGTAATGATAGGGTTGGCTCTGCAATTATTGCCCTGCGGTGCTTTGCTGAAGTTATAGCACAGCAAATATTAGGAtttctaaaacagctttattggcagttcacatgccatgtaattcacccactcgaagtatatagttcagtggtttttagtatattcacagatgttgggaaacaacactccaatcaattttagaattgtttttccacctc--aaaa s panTro4.chr2A 18558867 371 - 113622374 TAAAAAAA-CAGAGGAGTTGTACTCTCCTTTTCAGCATTTAAATTCTGTAATCCTTGAAGGATGGGTCTTTAGTGTAGTCATTTATTTTTTGCTGTGCTAATATGCTCTGCATCTAGCTTGATCGCAAGTGCAGTTTTAAGTTTTCCTGTGTCATACTGTAATGGTAGGGCTGGCTGTGCAATTTTTGCCCTGCGGTACTTTGCCACAGTAACAGCACAGCAAATACTAGGAtttctaaaacagctttattggtaattcacacaccatgtaattcacccacttgaagtatacagttcagtgg-ttttaacatattcacagatgttggtaaccagcattccaatcaattttagaattgtttctccacctc--aaaa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5399789 371 + 72422247 TAAAAAAA-CAGAGGAGTTGTACTCTCCTTTTCAGCACTTAAATTCTGTAATCCTTGAAGGATGGGTCTTTAGTGTAGTCATTTATTTTTTGCTGTGCTAACATGCTCTGCATCTAGCTTGATCGCAAGTGCAGTTTTAAGTTTTCCTGTGTCATACTGTAATGGTAGGGTTGGCTCTGCAATTATTGCCCTGTGGTACTTTGTCACAGTTATAGCACAGCAAATACTAGGATTTCTAAaacagctttattggtaattcacataccatgtaattcacctactcaaagtatacagttcagtgg-ttttagcatattcacagatgttggtaaccaacattccaatcaattttagaattgtttctccacctc--aaaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94511960 369 - 123690457 TAAAAAAACCAGAGGAGTTGTACTCTCCTTTTCAGCACTTACATTCTGTAATCCTTGAAGGATGATTCTTTAGTGCAGTCATTTATTTTTTGCTGTGCTAATATGCTCTACATCTAGCTTGATCTTAAGTGCAGTTTTAAGTTTTCCCATGTCATACTATAATCGTAGGGTTGACTCTGCAATTATTGCACTGTGGTACTTTGCCGTCATTATAGCACAGCAAATGTTAGGATTTCTAAaacagctttattgataattcacataccatgtaattcacccacttgaagtatacagttcgatggtttttagtgtattcacagatgttggtaa----cactccaatcagttttagaattgtttttccacctc--aaaa i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120046743 370 + 198365852 TAAAAAAA-CAGAGGAGTTGTACTCTCCTTTTCAGCACTTAAATTCTGTAATACTTGAAGGATGATTCTTTAGTGCAGTCATTTATTTTTTGCTATGCTAATATGCGCTACGTCTAGCTTGATCCTAAGTGCAGTTTTAAGTTTTCCTGTGTCATACTATAATGGTAGGGTTGACTCTGCGATTATTGTACTGTGGTACTTTGCTGCAGTTATAGCACAGCAAATATTAGGATTTCTAAaacagctttattgataattcacataccatgtaattcacccacttgaagtatgcagtttggtggtttttagtgtattcacagatgttggtaaccaacactccagtcagttttagaattgtttttccacctc----aa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139213 372 + 192294377 TACAAAAA-CAGAGGAGTTGTACTCTCCTTTTCAGCACTTAAATTCTGTAATACTTGAAGGATGATTCTTTAGTGCAGTCATTTATTTTTTGCTATGCTAATATGCTCTACGTCTAGCTTGATCCTAAGTGCAGTTTTAAGTTTTCCTGTGTCATACTATAATGGTAGGGTTGACTCTGCGATTATTGCACTGTGGTACTTTGCTGCAGTTATAGCACAGCAAATATTAGGATTTCTAAaacagctttattgataattcacataccatgtaattcacccacttgaagtatgcagtttggtggtttttagtgtattcacagatgttggtaaccgacactccagtcagttttagaattgtttttccacctc--aaaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104186341 369 + 180432695 --aaaaaa-cagaggagTTGTACTGTCCTTTTCAGCACTTAAATTCTGTAATACTTGAAGGATGATTCTTTAGTGcagtcatttattttttgctatgcTAATATACTCTACGTCTAGCTTGATCCTAAGTGCAGCTTTAAGTTTTCCTGTGTCATACTATAATGGTAGGGTTGACTCTGCGATTATTGCACTGTGGTACTTTGCTGCAGTTATAGCACAGCAAA---TAGGATTTCTAAAACAGCTTTGTtgataattcacataccatgtaATTCACCCACTTGAAGTATACAGTTtggtggtttttagtgtattcacagatgTTGGTAACTGACTCTCCAGTcagttttagaattgtttttccacctcaaaaaa i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51252805 372 + 127223203 AAAAAAAA-CAGAGAAGTTGTACTCTCCTTTTCAGCACTTAAATTCTGTAATACTTGAAGGATGATTCTTTAGTGCAGTCATTTATTTTTTGCTATGCTAATATGCTCTATGTCTAGCTTGATCCTAAGTGCAGTTTTAAGTTTTCTTGTGTCATACTATAATGGTAGGGTTGACTCTGCGATTATTGCACTGTGGTACTTTGCTGCAGTTATAGCACAGCAAATATTAGGATTTCTAAaacagctttattgataattcacataccatgtaattcacccacttgaagtatacagtttggtggtttttagtgtgttcacagatgttggtaaccgacattccagtcagttttagaattgtttttccacctc--aaaa i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643328 372 + 128169293 TAAAAAAA-CAGAGGAGTTGTACTCTCCTTGTCAGCACTTAAATTCTGTAGTCCTTGACGGATGAGTCTTTACTGCAGTCATTTATTTTTTGCTGTGCTAATACGCTCTGCATCTAGCTTGATCCTAAGTGCAGTTTTAAGTTTTCCTGTGTCATACCATAATGGTAGGGTTGGCTCTGCAATTATTGCACTGCAGTGCTTTGCCGCAGTCATAGCACAGCAAACATTAGGAtttctaaaatagctttactgatcattcacataccatgtaactcacccacttgaagtatagagttcagtggtttttagtatattcacagatgttggtaaccagtactccagtcaattttagaattgtttttccacttt--aaaa i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 129099 140 - 319779 I e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1602.000000 s hg38.chrUn_GL000218v1 30011 2 + 161147 -----aa-- s panTro4.chr2A 18559238 2 - 113622374 -----aa-- i panTro4.chr2A C 0 I 9 s ponAbe2.chrUn 5400160 2 + 72422247 -----aa-- i ponAbe2.chrUn C 0 I 9 s nomLeu3.chr11 94512329 2 - 123690457 -----aa-- i nomLeu3.chr11 C 0 I 10 s rheMac3.chr3 120047113 2 + 198365852 -----aa-- i rheMac3.chr3 C 0 I 15 s macFas5.chr3 114139585 2 + 192294377 -----aa-- i macFas5.chr3 C 0 I 15 s papAnu2.chr3 104186710 2 + 180432695 -----aa-- i papAnu2.chr3 C 0 I 15 s chlSab2.chr21 51253177 2 + 127223203 -----aa-- i chlSab2.chr21 C 0 I 15 s nasLar1.chr3 109866901 2 + 179790006 -----ag-- i nasLar1.chr3 N 0 N 0 s calJac3.chr8 49643700 9 + 128169293 aaaCAAATA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 129099 140 - 319779 I e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=197122.000000 s hg38.chrUn_GL000218v1 30013 82 + 161147 aaatcctatgccctttagcttattt-----------------------tctttctatttatttatttatttat-------------------tttaagagatggggtcttgctcagtcgaccag s panTro4.chr2A 18559249 77 - 113622374 aaatcctatgccctttaccttattt-----------------------tatttttatttatttattt-----t-------------------tttaagagatggggtcttgctcagtcaaccag i panTro4.chr2A I 9 C 0 s ponAbe2.chrUn 5400171 101 + 72422247 AAATCCTATGCCCTTTACCTTATtt-----------------------tatttatttttatttatttatttatttatttatttatttatttatttaAgagatggggtcttgttcagtcgaccag i ponAbe2.chrUn I 9 C 0 s nomLeu3.chr11 94512341 104 - 123690457 aaatcctatgccctttaccttagttttttctggcaggatcaactagg-tttttttctttgtttgttcgtttgt-------------------tttaagagatggggtcttgctcagttgcccag i nomLeu3.chr11 I 10 C 0 s rheMac3.chr3 120047130 99 + 198365852 AAATCCTATGCCCTTTAGCTTAGTTTTTGCTGGCAGGATCAACTAGGTTTTTTGtttttgttt------ttgt-------------------ttttagagatggggtcttgctcagtcgcccag i rheMac3.chr3 I 15 C 0 s macFas5.chr3 114139602 99 + 192294377 AAATCCTATGCCCTTTAGCTTAGTTTTTGCTGGCAGGATCAACTAGGTTTTTTGtttttgttt------ttgt-------------------ttttagagatggggtcttgctcagtcgcccag i macFas5.chr3 I 15 C 0 s papAnu2.chr3 104186727 99 + 180432695 aaatcctaTGCCCTTTAGCTTAGTTTTTGCTGGCAGGATCaactaggttttttgtttttgttt------ttgt-------------------ttttagagatggggtcttgctcagtcgcccag i papAnu2.chr3 I 15 C 0 s chlSab2.chr21 51253194 99 + 127223203 AAATCCTATGCCCTTTAGCTTAGTTTTTGCTGGCAGGATCAACTAGGTTTTTTGtttttgttt------ttgt-------------------ttttggagatggggtcttgctcagtcgcccag i chlSab2.chr21 I 15 C 0 s calJac3.chr8 49643709 97 + 128169293 AAATCCTATGTCCTTTACCTTATTTTTTACTGGCAGGATCAACCAGG-Tttttgtttttgtttgt-------t-------------------tttaagagatggggtcttgctcagtcatccag i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 129099 140 - 319779 I e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=59441.000000 s hg38.chrUn_GL000218v1 30095 26 + 161147 cccaggctggagtacagtggtgtaat s panTro4.chr2A 18559326 26 - 113622374 cctaggctggagtgcagtggtgtagt i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5400272 26 + 72422247 cccaggctggaatgcagtggtgtaat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94512445 26 - 123690457 cccaggctggagtgcagtggtttgat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047229 26 + 198365852 cccaggctggagtgcagtggtctgaa i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139701 26 + 192294377 cccaggctggagtgcagtggtctgaa i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104186826 26 + 180432695 cccaggctggagtgcagtgttctGAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253293 26 + 127223203 ctcaggctggagtgcagtggtttgaa i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643806 14 + 128169293 cc------------cagtggtgtgat i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129239 24 - 319779 ccctgggtagagtgcagtgctcat-- i micMur1.scaffold_1595 I 140 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=14290.000000 s hg38.chrUn_GL000218v1 30121 3 + 161147 cat s panTro4.chr2A 18559352 3 - 113622374 cat i panTro4.chr2A C 0 C 0 s gorGor3.chr7 62911426 3 - 158137892 cat i gorGor3.chr7 N 0 I 175 s ponAbe2.chrUn 5400298 3 + 72422247 cat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94512471 3 - 123690457 cat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047255 3 + 198365852 cat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139727 3 + 192294377 cat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104186852 3 + 180432695 CAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253319 3 + 127223203 cat i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643820 3 + 128169293 cat i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129263 3 - 319779 cgt i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=571906.000000 s hg38.chrUn_GL000218v1 30124 174 + 161147 agcttagtgcagccttgaactcctgggctcaagcaatcctcccatctcagcctccctagtagctacgagtacaggcatggaccacaacaccctgcctcctgtgccgtttagctttcaattctgtctctctacatacatcatctgcacccccgc----agttgtagcactggcaatcac s panTro4.chr2A 18559355 174 - 113622374 agcttagtgcagccttgaactcctgggctcaaatgatcctcccacctcagcctccctagtagctacgagtacaggcatggaccacaacaccctgcctcctgtgccctttagctttcaattccatctctccacatccctcatctgcacccccgc----agttgtagcgctggaaatcac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5400301 172 + 72422247 agcttagtgcagccttgaactcttgggctcaagtgatcctcccacctcagtctccctagtagctaggagtacaggcatggaccacaacaccctgcCTCGTGTGCCCTTTAGCTTTC-ATTCCATCTCTCCACATCTGTCATCTGCACCCCTGC----AGTTGTAGCActggc-atcac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94512474 174 - 123690457 agcttagtgtagccttgaactcctgggctcaagcgattctcccacctcagcctccctagtagctaggagtataggcatgcaccacagcactctgcctcctgtgccctttggctttgaattccatctctccatatccatcatctgcacgcctgc----agttgtagccccggcaatcac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047258 174 + 198365852 agcttagtgcagccttgaactcctgggctcaagcgattctcccacctcagcctccctagtagctaggagtataggcatgcaccacaacaccctgcCTCCTGTGCCCTTTAGCTTTGAATTCCATCTCTCCATATCCATTATCTGCACCCCCGC----AGTTGTagccccggcaatcac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139730 174 + 192294377 agcttagtgcagccttgaactcctgggctcaagcgattctcccacctcagcctccctagtagctaggagtataggcatgcaccacaacaccctgcCTCCTGTGCCCTTTAGCTTTGAATTCCATCTCTCCATATCCATTATCTGCACCCCCGC----AGTTGTagccccggcaatcac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104186855 174 + 180432695 AGCTtagtgcagccttgaactcctgggctcaagcgattctcccacctcagcctccctagtagctaggagtataggcatgcaccacaacaccctGCCTCCTGTGCCCTTTAGCTTTGAATTCCATCTCTCCATATCCATTATCTGCACCCCCAC----AGTTGTAGCCCCAGCAATCAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253322 174 + 127223203 agcttagtgcagccttgaactcctgggctcaagcgattctcccacctcagcctccctagtagctaggagtataggcatgcaccacaacaccctgcCTCCTGTGCCCTTTAGCTTTGAATTCCATCTCTCCATATCCATTATCTGCACCCCCGC----AGTTGTagccccggcaatcac i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643823 174 + 128169293 agctcagtgcagccttgaactcctgggttcaagcaatccttccacctctgcctccctagtagctaggagtataggcacgtaccacaacatcctgcCTCCTATGCCCTTTAGCTTTCAGTTCCATCTCTCCATATCCGTCATCCACAACCCTGC----AGTCATAGccctgacaatcac i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129266 174 - 319779 agctcactcta-cctcaaactcctgggctcaagtgatcctcttgcctcagcctcccaaagagctgggactacaggtgtgagccac--tgcccagctccctgtgccctttagctctcactcccatcccttaatattcatcattcacccacctatcccaacccctatcccagctaatca- i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e gorGor3.chr7 62911429 175 - 158137892 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=2552.000000 s hg38.chrUn_GL000218v1 30298 1 + 161147 c s panTro4.chr2A 18559529 1 - 113622374 c i panTro4.chr2A C 0 C 0 s gorGor3.chr7 62911604 1 - 158137892 c i gorGor3.chr7 I 175 I 453 s ponAbe2.chrUn 5400473 1 + 72422247 c i ponAbe2.chrUn C 0 C 0 s rheMac3.chr3 120047432 1 + 198365852 c i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139904 1 + 192294377 c i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187029 1 + 180432695 C i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253496 1 + 127223203 c i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643997 1 + 128169293 t i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 129440 0 - 319779 C e saiBol1.JH378107 6191462 2409 - 58292249 I e nomLeu3.chr11 94512648 0 - 123690457 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=140024.000000 s hg38.chrUn_GL000218v1 30299 44 + 161147 aatctttctgcctctgga---ttccctattgcctgtgtttcatataa s panTro4.chr2A 18559530 44 - 113622374 aatctttctgtctctgga---ttccctattgcgtgtgtttcatataa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5400474 43 + 72422247 aatctttctgtctctgga---tt-cctattgtgtgtgtttcatataa i ponAbe2.chrUn C 0 I 382 s nomLeu3.chr11 94512648 43 - 123690457 -gtctttctgcctctgga---ttccctattctgtatgtttcatatga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047433 44 + 198365852 agtctttctgcctctgga---ttccctattctgtatgtttcatatga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139905 44 + 192294377 aatctttctgcctctgga---ttccctattctgtatgtttcatatga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187030 44 + 180432695 AATCTTTCTGCCTCTGGA---TTCCCTATTCTGTATGTTTCATATGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253497 44 + 127223203 aatctttctgcctctgga---ttccctattctgtatgtttcatatga i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49643998 44 + 128169293 tatctttctgcctctgga---ttccttattctgtatgtttcatatga i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129440 45 - 319779 --gctttccgtctctgtggatttccctgttctgaccatttcatatga i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e gorGor3.chr7 62911605 453 - 158137892 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=1074088.000000 s hg38.chrUn_GL000218v1 30343 405 + 161147 atgggattatct-atcatatgggcttttgttactggattctttcacttggcataatgcttgcaaggtttgtctatgctgtgacatgtatcagtacttactttttatggccacatgatactctg-tacatggatacactggattttgtttatgcacttgtcagttgatggatatttaggacattgtttaccccttttggctatt-atgaataatgctgctataaacattggtgtataagtttttgtgtagacatttgtcttcggt--gtttatctaggagcagaattgctcagatgtat-ataactgtct--aa----ttgaggaactgccaaactactttttgaaatggctgcattattttttattccctccagcagtgtattaaaatttaag--tttctccacatcttcacaaacact s panTro4.chr2A 18559574 405 - 113622374 atgggattatat-atcatactggcttttgttactggcttctttcacttggcataatgcttgcaagatttgtctatgctataacatgtatcagtacttactttttatggccgaatgatattctgttacatggatacactggattttgtttatccacttgtcagttggtggacatttaggacattgttaaccccttttggccatt-acgaataatgctgctataaacattggtatacaagtttttgtgtagacatttctctttggt--gtatatct-ggagcagaattgctcggatgcgtgataactatct--aa----ttgaggaactgccaaactactttgtgaaatggctgcattattttttattccctccagcggtgtattaaaatttcag--tttctccacatcttcacaagcac- i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94512691 403 - 123690457 atgggattatat-atcatgtgggcttttgtgactggattctttcacttggcatagtgctttcaagatttgtctatgctgtagcatgtatcagtacttac---ttatggccaaatgatattccattacatggatacactgcattttatttatccgcttgtcagttgatggacatttaggacgtt----accccttttggctattaacgaataatgtggctataaacgttggtgtacaagtttttgtgtagacatttctcttgggt--atatatctaggagtagaattgctgggacacatgataactatgttcag----ttgaagaactgccagactaatttttgaaatggctgcattattttttattccccccagcagtgtattaaaatttctg--tttcttcacatctccacaaacact i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047477 409 + 198365852 atgggattatat-atcatatgggcttttgtgactggattctttcacttggcatagtgctttcaagatttgtctatgccgtaacatgtatcagtacttactttttatggccaaatgatactccattacatggatacactgcattttgtttatccacttgtcagttgatggacatttaggacattgtttaccccttttggctatt-acgaataatgctgctataaacattggtatacaagattttgtgtagacatttctcttgggt--gtatatctaggagtagaattgctggcacacatgataactatgttcag----ttgaagaactaccagattattttttgaaatggctgcattattttttattccctccagcagtgtattaaaatttcag--tttctccacatcttcacaaacatt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114139949 409 + 192294377 atgggattatat-atcatatgggcttttgtgactggattctttcacttggcatagtgctttcaagatttgtctatgccgtaacatgtatcagtacttactttttatggccaaatgatactccattacatggatacactgcattttgtttatccacttgtcagttgatggacatttaggacattgtttaccccttttggctatt-acgaataatgctgctataaacattggtatacaagattttgtgtagacatttctcttgggt--gtatatctaggagtagaattgctggcacacatgataactatgttcag----ttgaagaactaccagattattttttgaaatggctgcattattttttattccctccagcagtgtattaaaatttcag--tttctccacatcttcacaaacatt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187074 409 + 180432695 ATGGGATTATAT-ATCATATGGGCTTTTGTGACTGgattctttcacttggcatagtGCTTTCAAGATTTGTCTATGCcgtaacatgtatcagtacttgCTTTTTATGGCCAAATGATACTCCATTACATGGATAcactgcattttgtttatccacttgtcagttgatggacatttaggacATTGTTTACCCCTTTTggctatt-acgaataatgctgctataaacattggtATGCAAGATTTTGTGTAGacatttctcttgggt--gtatatctaggagtagaattgctggcaCACATGATAACTATGTTCAG----TTGAAGAACTACCAGATTATTTTTCGAAATGgctgcattattttttattccctccagcagtgtattaaaatttcag--tttctccacatcttcacaaATACT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253541 409 + 127223203 atgggattatat-atcatatgggctgttgtgactggattctttcacttggcatagtgctttcaagatttgtctatgccgtaacatgtatcagtacttactttttatggccaaatgatactccattacgtggatacactgcattttgtttatccacttgtcagttgatggacatttaggacattgtttaccccttttggctatt-acgaataatgctgctataaacattggtatacaagtttttgtgtagacatttctcttgggt--gtatatctaggagtagaattgctggcacacatgataactatgttcag----ttgaagaactaccagattatttttcgaaatggctgcattattttttattccctccagcagtgtattaaaatttcag--tttctccacatcttcacaaacact i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49644042 403 + 128169293 ataggatta--t-atcatat-ggtttttgtgactggattcttttacttggcacagtgctttcaagatttgtctatgctgtaacgtgtgtcagtacttactttttatggccaagtgatactgcattacatggatacaatgcattttgtttatccacttgtcagttgatagacacttaggacgttgtttaccccttttggctatt-atgaataatgctgctataaacattggtgtacaagtttttgtgtagacatttctcttgggt--gtatgtctagg---agaattgctgggacacatggtaactatgtttaa----ttgaggaactgccagtctattttttgaaatggcggcattgttctttgttcccttcagcagtgtattaaaatttcag--tttctccacatcttcacgaacact i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129485 410 - 319779 atggaataatatcatgatgcaggcttttgtgactgcattctttcacttgacatgatgtttttaagatttgtctatgttgtaacatgtattagtacttactttttatggccaaatgatattcggttacatgagtataccacattttgtttgtctgtttgtcagttgatggacattttgg---ttgtttcttccttttggctatt-ataagtcatattgctatcaatgtttatgtacacgtttttgcg--gacatttctcttgggtacacatacctaggagtggaattgctgagtcatatggtaactatgtttaattgtttgaggaactgctaggctgttttccaaagtggctgca---ttttatattcctaccagcaaggtaggagagttttgatttttttccacatcctcacaaaccat i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e gorGor3.chr7 62911605 453 - 158137892 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5400517 382 + 72422247 I a score=10668.000000 s hg38.chrUn_GL000218v1 30748 4 + 161147 tact s gorGor3.chr7 62912058 4 - 158137892 tact i gorGor3.chr7 I 453 N 0 s nomLeu3.chr11 94513094 4 - 123690457 tact i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047886 4 + 198365852 tact i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140358 4 + 192294377 tact i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187483 4 + 180432695 TACT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253950 4 + 127223203 tact i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49644445 4 + 128169293 tact i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 129895 4 - 319779 tttt i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5400517 382 + 72422247 I e panTro4.chr2A 18559979 0 - 113622374 C a score=497187.000000 s hg38.chrUn_GL000218v1 30752 210 + 161147 gtgtgacttt----ttaattgtagctattataatgtatgtgaaattgtatctccttgtgg---ttttgatttgtattttcctattgaaggtaatgtccagtgtcttttctcatgcttattggccatgtgtatatcttctttggggaaatatttgttgagatcttttgtc-atttttttttcct-gctaggg-atca-ttttattttaaaaac---aatagac---tt s panTro4.chr2A 18559979 211 - 113622374 -tgtgacttt----ttaattgtagccattgtaatgtatgtgaaattgtatctcattgtgg---ttttgatttgtattttcacggtgacagtaatgtccaatgtcttattgcatgcttattggccatgtgtatatcttctttggagaaatatttgttgagatcttttgcc-atttttttttcct-gctaggg-atca-ttttattttaaaaaca-tagtagac---tc i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94513098 211 - 123690457 gtgtgac--t----ttaattctagccattctagtgtatgtggagtggtatctcattgtga---ttttgatttgtatgttcctgttgacagtgatgtccagcatcttatcttatgcttattggccatttgtatatcttctttggagaaatatttgttcagatcctttgccttttttttTTTCCT-TCTAGGG-ATCA-TTTTAttttaaaaaca-taatagag---tt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120047890 210 + 198365852 gtgcgacttt----ttaattctagccatcctagggtatgtgaagtggtatttcactgtga---ttttgatttgtattttcctgttgacagtgatgtccagcatcttatcttatgcttattggccatttgtgtatcttctttggagaaatatttgttcagatcctttgcc-a-ttttttttcct-gctaggg-atca-ttttatttgaaaaaca-taatagac----t i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140362 214 + 192294377 gtgcgacttt----ttaattctagccatcctagggtatgtgaagtggtatttcattgtga---ttttgatttgtattttcctgttgacagtgatgtccagcatcttatcttatgcttattggccatttgtgtatcttctttggagaaatatttgttcagatcctttgcc-a-ttttttttcct-gctaggg-atca-ttttatttgaaaaaca-taatagacttttt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187487 211 + 180432695 GTGTGACTTT----TTAATTCTAGCCATCCTAGGGtatgtgaagtggtatttcattgtga---ttttcatttgtattttcctgttGACAGTGATGTCCAGCATCTTATcttatgcttattggccatttgtgtatcttctttggagaaatatttgttcagatcctttgcc-a-ctttttttCCT-GCTAGGg-atca-ttttatttgaaaaacg-taatagac---tt i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51253954 212 + 127223203 gtgtgacttt----gtaattctagccatcctagggtatgtgaagtagtatttcattgtga---ttttgatttgtattttcctattgacagtgatgtccagcgtcttatcttatgcttattggccatttgtgtatcttctttggagaaatacttgttcagatcctttgcc-a-ttttttTTCCT-GCTAGGG-ATCA-TTTTATTTGAAGAACA-taatagac--ttt i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49644449 214 + 128169293 gtgtgacttt----ttaattatagccattctagtgtatgttaagtggtatttcattgtgg---ttttgatttatgttttcctgttaacagtgatgtccagagttttatctcgtgcttattagccatttgtatgtcttctttggcgacg-atttgtacagattctttgcc-a-tttttttacctggctaaggcatcatttttatttttaaaacattggaagac---tt i calJac3.chr8 C 0 I 3 s micMur1.scaffold_1595 129899 217 - 319779 atctgattttgatactattaatagctatcttgatatgtgtgaagtggtatctcattgtgctatttttgatttgcacttccctgttgacagtgatgtccagcatcttttcctgtgcatattggacatttgtatatctcctttggagaaatgtttattcagattctttacc-a--gtttttttct-actgagG-ATCA-TTTTAtttaaaaaaat-taatagag---tt i micMur1.scaffold_1595 C 0 C 0 e saiBol1.JH378107 6191462 2409 - 58292249 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5400517 382 + 72422247 I a score=701.000000 s hg38.chrUn_GL000218v1 30962 6 + 161147 -ttttt----t s panTro4.chr2A 18560190 9 - 113622374 -ttttt-tcct i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94513309 10 - 123690457 -tttttttttt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048100 10 + 198365852 -tttttttttg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140576 10 + 192294377 -tttttttttg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187698 10 + 180432695 -tttttttttg i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254166 10 + 127223203 -tttttttttg i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49644666 3 + 128169293 -ttt------- i calJac3.chr8 I 3 M 636 s saiBol1.JH378107 6193871 3 - 58292249 -ttt------- i saiBol1.JH378107 I 2409 I 3 s micMur1.scaffold_1595 130116 6 - 319779 tttttt----- i micMur1.scaffold_1595 C 0 I 9 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5400517 382 + 72422247 I a score=52878.000000 s hg38.chrUn_GL000218v1 30968 22 + 161147 agcagttttag------aaaaaatagag s panTro4.chr2A 18560199 18 - 113622374 agcagcttcag------aaaaaat---- i panTro4.chr2A C 0 C 0 s nomLeu3.chr11 94513319 22 - 123690457 agcagttttag------aaaaaattgag i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048110 22 + 198365852 agcagttttat------aaaaaattgag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140586 22 + 192294377 agcagttttat------aaaaaattgag i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187708 22 + 180432695 agcagttttaT------AAAAAATTGAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254176 22 + 127223203 agcagttttat------aaaaaattgag i chlSab2.chr21 C 0 C 0 s saiBol1.JH378107 6193877 22 - 58292249 agcagttttag------aaaaaattgag i saiBol1.JH378107 I 3 C 0 s micMur1.scaffold_1595 130131 28 - 319779 agcagttttaggtttcaaaaaaattgat i micMur1.scaffold_1595 I 9 C 0 e calJac3.chr8 49644669 636 + 128169293 M e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I e ponAbe2.chrUn 5400517 382 + 72422247 I a score=63990.000000 s hg38.chrUn_GL000218v1 30990 21 + 161147 agaaaagtgcagagagtccac s panTro4.chr2A 18560217 21 - 113622374 agaaaagtgcagagagttcac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5400899 21 + 72422247 agaaaagtgcggagagttcac i ponAbe2.chrUn I 382 C 0 s nomLeu3.chr11 94513341 21 - 123690457 aggaaagtgcagagggttcac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048132 21 + 198365852 aggaaaatgtagagagttcac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140608 21 + 192294377 aggaaaatgtagagagttcac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187730 21 + 180432695 AGGAAAATGCAGAGAGTTCAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254198 19 + 127223203 aggaaaatgc--agagttcac i chlSab2.chr21 C 0 C 0 s saiBol1.JH378107 6193899 21 - 58292249 aggaaagtgcagagagttcac i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 130159 15 - 319779 ------atgtacagagttcac i micMur1.scaffold_1595 C 0 C 0 e calJac3.chr8 49644669 636 + 128169293 M e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=843261.000000 s hg38.chrUn_GL000218v1 31011 247 + 161147 atatgct-cccctacagt-----gcccccgcccagttttcccaactcttaacaccttgcactactgtgctaaattgattagatttgatgaactgatacttatat-----------ctgaaattcatagtttacttcagggttcactc--tgtgttttatagatttttggatttgacaaatgtataatgtcatgtacccaccattatagtattatgtagaacagtttcattgccct--aaaaatctcctgtgctccactgagtcattcc s panTro4.chr2A 18560238 247 - 113622374 atatgct-cccctacaat-----gcccccgcccagtcttcccgactcttaacatcttgcgttactgtgctacatttattagatttgatgaactgatacttatat-----------ctgaagttcatagtttacattagggttcactc--tgtgtttcatagatttttggatttgacaaatgtataatgtcatgtacccaccattacagtattatgtagaacagtttcattgccct--aaaaatctcctgtgctccactgattcattcc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5400920 250 + 72422247 atatgct--ccctgcaatgccccgcccccacccagtcttcctgactcttaacatcttgcgttactgtgctacatttattagattcgatgaactgatacttacat-----------ctgaagttcatagtttacat-agcattcactc--tgtgttttatagatttttggatttgacaaatgtataatgtcatgtacccaccattacactattatgtagaacagtttcattgccct--aaaaatctcctgtgctccactgattcattcc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94513362 255 - 123690457 atatgctccccctacagt-----gcccccgcccagttttcccgactcttaacatcttgcattactgtgctacatttattagatttgatgaactgatacttatat------attaactgaagttcatagtttacataagggttcactctttgtgttttatagatttttggatttgacaaatgtttaaggccatgtacccaccattacagtattatgtagaacagtttcattgccct--aaaaatctcctgtgctccacttactcattcc i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048153 256 + 198365852 atatgctccccctccagt-----gcccccgcccagttttcccaactcttaacatcttgcgttactgtgctacatttattagatttgatgaactgatacttatat------attaactgaagttcatagtttatgtaagggttcactctttgtgttttatagatttttggatttgacaaatgtttaatgccatgtacccaccattacagtattatgtagaacagtttcattgccct-aaaaaatctcctgtgctccacttattgattcc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140629 256 + 192294377 atatgctccccctccagt-----gcccccgcccagttttcccaactcttaacatcttgcgttactgtgctacatttattagatttgatgaactgatacttatat------attaactgaagttcatagtttatgtaagggttcactctttgtgttttatagatttttggatttgacaaatgtttaatgccatgtacccaccattacagtattatgtagaacagtttcattgccct-aaaaaatctcctgtgctccacttattgattcc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104187751 257 + 180432695 ATATGCTCCCCCTCCAGT-----GCCCCCGCCCAGTTTTCCCAACTCTTAACATCTTGCGTTACTGTGCTACATTTATTAGATTTGATGAACTGATACTTATGT------ATTAACTGAAGTTCATAGTTTATGTAagggttcactctttgtgttttatagatttttggATTTGACAAATGTTTAATGCCATGTacccaccattacagtattatgTAGAAcagtttcattgccctaaaaaaaTCTCCTGTGCTCCACTTACTGATTCC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254217 250 + 127223203 atatgctccccctccagt-----gcccccgcccagttttcccaactcttaacatcttgcgttactgtgctacatttattagatttgatgaactgatactta-----------taactgaagttcatagtttatgtaagggttcactctttgtgttttatagatttttggatttgacaaatgtttaatgccatgtacccaccattacagtattatgtagaacagtttcattgccct--aaaaatctcctgtgctccacttactgattcc i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49645314 179 + 128169293 ATATGCTCCCCCTTTAGT-----Gcccctacccaattttcccaacccttaacattttgcattactgtgctatgtttgttagatttgatgaactgatgcttatgt------gttaactgaagtttatagtttacattagggttcactctttata----------ttttggatttgacaaa--------------------------------------------------------------------tgtgctccacttactcattcc i calJac3.chr8 M 636 C 0 s saiBol1.JH378107 6193920 180 - 58292249 atatgctcccccttcagt-----gcccc-atccagtttttgtgactcttaacatcttgcattactgtgctatgtttgttagatttgatgaactgatgcttatgt------gttaactgaagttcagaggttacattcgggttcactctttgtgt--------tttttggatttgacaaa--------------------------------------------------------------------tgtgcttcacttgttcattcc i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 130174 253 - 319779 atatgttcacctttcact-----ctccc--cctagttttccctacttttaacatcttgcattcctgtgctatatttgttagatttcataaagtgatactgatatatggttattaactgaagttcatagtttacattaggattcactc------ttgtatagttttttgggtttgacaaatgcaaaatgtcctgtatccaccattacagtgtcatatggaatagttttattaccct--aaaaatctcctgagctctacctagtcactca i micMur1.scaffold_1595 C 0 C 0 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296879v1 1538680 15271 - 1560628 I a score=6006.000000 s hg38.chrUn_GL000218v1 31258 1 + 161147 t s panTro4.chr2A 18560485 1 - 113622374 t i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401170 1 + 72422247 t i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94513617 1 - 123690457 t i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048409 1 + 198365852 t i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140885 1 + 192294377 t i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188008 1 + 180432695 T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254467 1 + 127223203 t i chlSab2.chr21 C 0 C 0 s rhiRox1.KN296812v1 319579 1 - 788236 t i rhiRox1.KN296812v1 n 15271 I 1721 s calJac3.chr8 49645493 1 + 128169293 t i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194100 1 - 58292249 t i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 130427 1 - 319779 t i micMur1.scaffold_1595 C 0 C 0 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I a score=2699451.000000 s hg38.chrUn_GL000218v1 31259 679 + 161147 ccacctcctcttcctcccaaac----ccccggtcattactaatcttttta----ctctctaattttgcctctcccagaatgtcatat-aatag-----atcatgtagtatgtatccttttcagactggcttctttcacccagcagtatacatttagggttcttctgtg-ctttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgcagaataatattccatttgtttgcatgtattgcagtttgtttatccattcttgaattatctatctctaattgggttgttttgtctttttattacagaattgtaattgttccttatgtatgccagacacaaatcccttgtgttcatcagggttgcaggattcaagatcaatatacaaaaatcaatagtatttg----acacac-tttaactgaatactacatactcacaatgagcaatcagaaaatgaaattaagaaagcaacttcatttatcatagcatc-aacaagaataaaa----tactaataaattt-----aagaagtgtaaaacttgtactctgaaaactataaaacattgttgaaagaaatgaaagaagatctaaataaatgtaaaagtatccca-tgatcatgaacctaaggcttaacattgttaagaaggcagtactccctaaactcatctacagatttaacttc-atccctgtcagaatcccagatgagttctctgt s panTro4.chr2A 18560486 678 - 113622374 cctcctcctcttcctcct--ac----ccccggtcattactgatcttttcac--tctctctaattttgcctctcccagaatgtcatgt-aatag-----atcatgtagtatgtatccttttcagactggcttctttcacctagcagtatacatttagggttcttctgtgtttttttcatggcctgatagctcattt-------------------ttcaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgtattgcagtttgtttatccattcttgaattatccatctctaattgggttgtttcgtctttttattactgaattgtaattgttccatatgtattctagatacaaatcccttgtgttcatcagggttgcaggatacaagatcaatatacaaaaatcaatagtatttg----acacac-tttaactgagtactacat----acaatgagcaatcagaaaatgaaattaagaaagcaacttcatttatcatagcatc-aacaagaataaaatacttactaataaattt-----aagaagtgtaaaacttgtactctgaaaactataaaacattgtcgaaagaagtgaaataagatctaaataaatgtaaaagtatccca-tgatcatggaccgaaggcttaacat--ttaagatggcagtcctccgtaaactcatctacagatttaacttc-atccctgtcagaatcccagatgagttctttgt i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401171 680 + 72422247 cctcctcctcttcctcat--ac----ctccagtcattactgagctttttac--tctctctaattttgcctctcccagaatgtcatgt-aatag-----atcatgtagtgtgtgtcctcttcagactggcttctttcacctagcaatatacatttagggttcttctgtg--ttttttatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgtattgcagtttgtttatccattcTTGAAttatccatctctaattgggttgttttgtctttttattactgaattgtaattgttccatatgtattgtagacacaaatcccttatgttcatcaaggttgcaggatacaagatcaatatacaaaaatcaatagtatttg----acacac-ttcaactgaatactgcatacttacaatgagcaatcagaaaatgaaattaagaaagcaacttcatttatcatagcatc-aacaagaataaaatacttactaataaattt-----aagaagtgtaaaacttgcactctgaaaactataaaacattgttgaaagaaatgaaagaagatctaaataaatgtaaaagtatccca-tgatcatgggccgaaggcttaacat--ttaagatggcagtcctccctaaactcatctgcagatttaacttc-atccctgtcagaatcccagatgagttctttgt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94513618 772 - 123690457 ccccgtcctcttcctcctaacc----ccgcagtcattactgatctttttgctttctctctcactttgcctttcccagaatgtcatat-aatagttgtaatcatatagtatgtagccttttcagactggcttctttcacctagcaatatacatttatggttcttctgtg-ttttttcatggcttgatagctcatttattattatTATT---AtactttaagttctagggtacatgtgcataacgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgcttgctgaatagtattccatTTGTTTGCATGCAATGCAGTTtgtttatccattcttgaattacccatctctaattgagttattttgtctttttattactgaattgtaatagttccttatatattctagatacaaatcccttCTgttcatcagggttgcaggatacaagatgaatatacaaaaatcaatggtatttg----acacac-tttaactgaatactacatacttaaaatgagcaatc--aaaatgaaattaagaaagcaactttgtttataatagcatc-aaaaagaataaaatactgagaaataaattt-----aagaagtgtaaaacttgtactctgaaaactataaaacgttgttgaaagaaatgaaagaagatctaaataaatggaaaagtatccca-tgatcatgaatcgaaggcttaacattgttaagatggcagtcctccctaaactgatttacacatttaagttg-atctctatcagaatcccagatgagttctttgt i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120048410 696 + 198365852 tcctgtcctcttcctcctaaatcccgccccagtcattactgatctttttactttctctttcactttgcctttcccagaatgtcatat-aatagttgtaatcatatagtatgtagccttttcagactggcttctttcacctagcagtatacatgtagggttcttccgtg-ttttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgcactgcagtttgtttatccgttcttgaattatacatctctaattgggttactttgtctttttgttactgaattgtaatagtttcttatgtattctaggtagaaATCCCTTCTgttcatcagggttgcaggatacaagatcaatatacaaaaatcaatggtgtttg----acacac-tttaactgaatactacatacttaaaatgagcaatctgaaaattaaattaagaaagcaacttcatttataatagcatc-aaaaagaataaaatacttagaaataaattt-----aagaagtgcaaaacttgtatactgaaaactataaaacattgttgaaagaaatgagagaagatctaaataaatggaaaagtatccca-tgatcatgaatcgaaggcttaacattattaagatggcagtcctccctaaactgatttacagattcaacttg-atccctatcagaatcccagatgagttctttgt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114140886 696 + 192294377 tcctgtcctcttcctcctaaatcccgccccagtcattactgatctttttactttctctttcactttgcctttcccagaatgtcatat-aatagttgtaatcatatagtatgtagccttttcagactggcttctttcacctagcagtatacatgtagggttcttccgtg-ttttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgcactgcagtttgtttatccgttcttgaattatacatctctaattgggttactttgtctttttgttactgaattgtaatagtttcttatgtattctaggtagaaATCCCTTCTgttcatcagggttgcaggatacaagatcaatatacaaaaatcaatggtgtttg----acacac-tttaactgaatactacatacttaaaatgagcaatctgaaaattaaattaagaaagcaacttcatttataatagcatc-aaaaagaataaaatacttagaaataaattt-----aagaagtgcaaaacttgtatactgaaaactataaaacattgttgaaagaaatgagagaagatctaaataaatggaaaagtatccca-tgatcatgaatcgaaggcttaacattattaagatggcagtcctccctaaactgatttacagattcaacttg-atccctatcagaatcccagatgagttctttgt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188009 697 + 180432695 TCCTGTCCTCTTCCTCCTAAACCCCGCCCCAGTCATTACTgatctttttactttctctttcactttgcCTTTCCCGGAATGTCATAT-AATAGTTgtaatcatatagtatgtagccttttcagactggcttctttcacctagcaGTATACATGTAGGGTTCTTCCGTGtttttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgCACTGCAGTTTGTTTATCCGTTCTTGAATTATACATCTCTAATTGGGttactttgtctttttgttactgaATTGTAAtagtttcttatgtattttagGTAGAAATCCCTTCTGTTCATCagggttgcaggatacaagatcaatatacaaaaatcaatggtGTTTG----ACACAC-TTTAACTGAATACTACATACTTAAAATGAGcaatctgaaaattaaattaagaaagcaacttcatttataatagcatc-aaaaagaataaaatacttagaaataaattt-----aagaagtgtaaaacttgtatactgaaaactataaaacattgttgaaagaaatgagagaagatctaaataaatggaaaagtatcCCA-TGATCATGAATCGAAGGCTTAACATTATTAAGATGGCGGTCCTCCCTAAactgatttacagattcaacttG-ATCCCTATCAGAATCCCAGATGAGTTCTTTGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51254468 695 + 127223203 tcctgtcctcttcctcctaaaccctgccccagtcattactgatctttttactttctctttcactttgcctttcccagaatgtcatat-aatagttgtaatcatatagtatgtagccttttcagactggcttctttcacctagcggtatacatgtagggttcttccgtg-ttttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------ttgctgaataatattccatttgtttgcatgcactgcagtttgtttatccgttcTTGAATTATACATCTCTaattgggttactttgtctttttgttactgaattgtaatagtttcttatgtattgtaggtagaaatcccttCTgttcatcagggttgcaggatacaagatcaatatacaaaaatcaatggtgtttg----acacac-tttaactgaatactacatacttaaaatgagcaatctgaaaattaaattaagaaagcaacttcatttataatagcatc-aaaaagaataaaatacttagaaataaattt-----aagaagtgtaaaacttgta-actgaaaactataaaacatggttgaaagaaatgaaagaagatctaaataaatggaaaagtatccca-tgatcatgaatcgaaggcttaacattattaagatggcagtcctccctaaactgatttacggattcaacttg-atccctatcagaatcccagatgagttctttgt i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49645494 673 + 128169293 ccccctcctcttcctcctaatc----ccccagtcattgctgatctttttactt----tctaattttgcctttcccagaatgtcatataaatatttgtgatcatatagtatgtagccttttcagactggcttctttcacctaccagaatatacgtagggtt-ttctgtgtttttttcatggcttgatagctcattt-------------------ttta--------------------------------------------------------------------------------attccatttgtttgcatgtactgcattttgtttatccattcTTGAAttatccatctctaattgggttattttgtctttttattactgaattgtaacagttccttatgtattctagatacaaatcccttGTgctcatcagggttacaggatacaggatcaatatacaaaaatcaacagtatctg----acacacttttaactgaatactacatatttacaatgaggaatctgaaaatgaaattaagaaagcaacttcatgtatagt---atc-agaaagaataaaatacttagaaataaattt-----cagaagtataaaacttgtactctgttagctataaaacattgttgaaagaaatggaagaagatttaaataaatggaaaagtatccca-tgattatggattgaaggcttaacattgttaagatggcagtgctccctaaactgatctacagatttaacttg-attcctattagcatcccagatgagttctttgt i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194101 691 - 58292249 tcccctcctcttcctcctaatc----ccccagtcgttgctgatctttttactttctctctaattttgcctttcccagaatgtcacataaatagttgtaattatatagtatgtagccttttcagactggcttctttcacctgatagtatacacttagggttgttctctg-ttttttcatggcttgatagctcattt-------------------tttaaa------------------------------------------------------------------tcgttgaataatattccatttgtttgcatgtactgcattttgtttatccattcttgaattatccatctctaattgggttattttgtctttttattac-gaattttaacagttccttatgtattctagatacaaatcccttGTgctcatcagggttataggatacaaaatcaatatacaaaaatcaatggtatctg----acacac--ttaactgcgtactacataattacaatgaggaatctgaaaatgaaattaagaaagcaatttcatgtataataacata-aaaaagaataaaatacttagaaataaaatt-----cagaagtataaaacttgtactctgttagctataaaacattgttgaaagaaatgaaagaagatttaaataaatggaaaagtatccca-tgattgtggattgaaggcttaacattatcaagatggcagtcctcgctaaactgatctacagatttaacttg-atccttattagcatcccagatgagttctttgt i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 130428 699 - 319779 -ccgcctcttttccctctgaac----ccccggccaccactaatatttttactatctctataattttgcctttcccagattgtcatat-aattgttgtaatcacacagtatgtagccttttcagactagtttcttttgcttagcaatatgcatgtaagcttcttc-atg-gttttttgtagcttgatagctcatttctttttattatttgcttaatataag---------------------------------------------------------------tatttgctgaataatattccatttgtttgcatgtaccaca----gattatccattTTTGAAttatctatttttaattcggttgtct----tttttattattgaatggtaatagtttcttatgtagtctagatacaaaccccttatgttcagcaggattgcaagat---aggtcaatatccaaaaatt----gtatttgatttatatac-tttcagtgaatactacatacttgtaatgaacaatctgaaaatgaaattaagaa---aactgtgtttacaatagcatcaaaaaagaataaaatccttcgaaataaatttaacaaaagaagtgtaaaacttgtattc-ggaaactataaaaca---ttgaaagaaatgtaaggagatctaaataaatagaaaagcatcctactgattgtggattgaagacttaaca---gtaagatggtaatacttcccaaattgatctacagattcaacttgaatccctattagaatcccagatgagttctttgt i micMur1.scaffold_1595 C 0 C 0 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=4664.000000 s hg38.chrUn_GL000218v1 31938 1 + 161147 a s panTro4.chr2A 18561164 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401851 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514390 1 - 123690457 g i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049106 1 + 198365852 a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141582 1 + 192294377 a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188706 1 + 180432695 A i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255163 1 + 127223203 a i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646167 1 + 128169293 a i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194792 1 - 58292249 a i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131127 1 - 319779 a i micMur1.scaffold_1595 C 0 C 0 s tupBel1.scaffold_120812.1-13864 2585 1 - 13864 a i tupBel1.scaffold_120812.1-13864 N 0 I 55 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=297787.000000 s hg38.chrUn_GL000218v1 31939 71 + 161147 -aaatcgacaagctgactctgaaattcatatggaattgcaagggact-aagaatagccaaaataatcttttga s panTro4.chr2A 18561165 71 - 113622374 -aaatcgacaagctgactctcaaattcatatggaattgtaagggact-gagaatagccaaaataatcttttga i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401852 71 + 72422247 -aaatcgacaagctgactctcaaattcatgtggaattgcaagggact-gagaatagccaaaataatcttttga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514391 71 - 123690457 -aaatctacaagctgactctcaaattcatacggaattgcaagggact-aagaatagccaaaacaatcttttga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049107 71 + 198365852 -aaatctacaagctggctctgaaattcatatggaattgcaagggact-aagaatagccaaaacaatcctttga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141583 71 + 192294377 -aaatctacaagctggctctgaaattcatatggaattgcaagggact-aagaatagccaaaacaatcctttga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188707 71 + 180432695 -AAATCTACAAGCTGgctctgaaattcatatggaattgcaagggact-aagaatagccaaaacaatcctttGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255164 71 + 127223203 -aaatctacaagctggctctgaaattcatatggaattgcaagggact-aagaatagccaaaacaatcctttga i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646168 72 + 128169293 -aaattgacaagctgactgtcaaattcatagggaattgcaagggacttaagaatagccaaaacaatcttttga i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194793 72 - 58292249 -aaattggcaagctgactgtcaaattcatatggaattgcaaggaactaaagaatagcctaaacaatcttttga i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131128 69 - 319779 gaaattgacaagctgattctaaaatttatatggaattgcaaaggagt-cagaatagtcaaaacaatctt---g i micMur1.scaffold_1595 C 0 C 0 e tupBel1.scaffold_120812.1-13864 2586 55 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=30909.000000 s hg38.chrUn_GL000218v1 32010 6 + 161147 aaatga s panTro4.chr2A 18561236 6 - 113622374 aaatga i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401923 6 + 72422247 aaatga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514462 6 - 123690457 aaatga i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049178 6 + 198365852 aaatga i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141654 6 + 192294377 aaatga i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188778 6 + 180432695 AAATGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255235 6 + 127223203 aaatga i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646240 6 + 128169293 aaatga i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194865 6 - 58292249 aaatga i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131197 6 - 319779 aaaaga i micMur1.scaffold_1595 C 0 C 0 s tupBel1.scaffold_120812.1-13864 2641 6 - 13864 aaaaaa i tupBel1.scaffold_120812.1-13864 I 55 I 41 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=91983.000000 s hg38.chrUn_GL000218v1 32016 21 + 161147 gaaacaaagtagaagaactca s panTro4.chr2A 18561242 21 - 113622374 ggaacagtgtaggagaactca i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401929 21 + 72422247 ggaacaatgtaggagaactca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514468 21 - 123690457 ggaacaaagtaggagacctca i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049184 21 + 198365852 ggaacaaagtaggagaactca i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141660 21 + 192294377 ggaacaaagtaggagaactca i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188784 21 + 180432695 GGAACAAAGTAGGAGAACTCA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255241 21 + 127223203 ggaacaaagtaggagaactca i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646246 21 + 128169293 ggaacaaagtaagagaactca i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194871 21 - 58292249 ggaacaaagtaagagaattct i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131203 21 - 319779 ggaacaaagtagtagaactca i micMur1.scaffold_1595 C 0 C 0 e tupBel1.scaffold_120812.1-13864 2647 41 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=24122.000000 s hg38.chrUn_GL000218v1 32037 6 + 161147 tactta s panTro4.chr2A 18561263 6 - 113622374 tactta i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401950 6 + 72422247 tactta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514489 6 - 123690457 taccta i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049205 6 + 198365852 tactta i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141681 6 + 192294377 tactta i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188805 6 + 180432695 TActta i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255262 6 + 127223203 tactta i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646267 6 + 128169293 tattga i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194892 6 - 58292249 tattta i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131224 6 - 319779 tacttc i micMur1.scaffold_1595 C 0 C 0 s tupBel1.scaffold_120812.1-13864 2688 6 - 13864 tagttc i tupBel1.scaffold_120812.1-13864 I 41 I 153 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=616453.000000 s hg38.chrUn_GL000218v1 32043 158 + 161147 -ctgactttaaaacttactacaagacaatgg------taatcaggacaatataatactagcagaaggatagatgtatagaccagtgggatagaattgagagtcagatatgaacccgtacatatat--aacc-actg-cttttgacaagagtgccaagattattcagtgg s panTro4.chr2A 18561269 160 - 113622374 -ctgactttaaaacttactacaagacaatgg------taataaggacaatataatactggcagaagggtagatgtatagaccagtgggaaagaattgacagtcagatatgaacccatacatatat--aaccaactgatttttggcaaggatgccaagattattcagtgg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5401956 160 + 72422247 -ctgactttaaaacttactacaagacaatgg------taataacaacaatataatactggcagaaggatagatgtacagaccagtgggatagaaatgagagtcagatacgaacccatacatatat--aaccaactgatttttgacaagggtgccaagattattcagtgg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514495 161 - 123690457 gctgattttaaaacttactacaagacaatgg------taataaggacaatataatactggcagaaggatagatgtatagatgagtgggatagaattgagagtcagaaatgaacccatacatatat--aatcaacttatttttgacaagggtgccaagattattcagtgg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049211 160 + 198365852 -ctgattttcaaacttactacaagacaatgg------taataaggacagtataatactggcagaaggatggatgtatagatgagtgggatagaattgagagtcagaagtgaacacatacatatat--aatcaacttatttttgacaagggtgccaagagtattcagtgg i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141687 160 + 192294377 -ctgattttaaaacttactacaagacaatgg------taataaggacagtataatactggcagaaggatggatgtatagatgagtgggatagaattgagagtcagaagtgaacacatacatatat--aatcaacttatttttgacaagggtgccaagagtattcagtgg i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188811 160 + 180432695 -ctgattttaaaacttactacaagaCAATGG------TAATAAGGACAGTATAATACTGGCAGAAGGATAGATGTATAGACGAGTGGGATAGAATTGAGAGTCAGAAatgaacacatacatatat--aatcaacttatttttgacaagggtgccaagagtATTCAGTGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255268 160 + 127223203 -ctgattttaaaacttactacaagacaatgg------taataaggacagtataatactggcagaaggatagatgtatagacgagtgggattgaattgagagtcagaaatgaacacatacatatat--aatcaacttatttttgacaagggtgccaagagtattcagtgg i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646273 155 + 128169293 -ctgactttaaaacttgctgcaagacaatga------taataaagactgtataatactggcagaaagatagatgtatagaccaatgagatagaattgag----agaggtgaacccatatatatat--aatcaactgatttttgacaagg-tgccaagattattcagtgg i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6194898 158 - 58292249 -ctgactttaaaacttgctacaagacaatga------taataaagactgtataatactagcaaaaagatagatgtatagaccaataggatagaattgag----agaggtgaacccatatatatataaaatcaactgatttttgacaaggttgctaagattattcagtgt i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131230 149 - 319779 -ctgacttcaaaacttactacaaagcaatggtaatattaataatgacagtgtaatactagcaca----tggatgta------------gtaggattcatagtcagaaatgaacct-tacatctgt--tgtcaactgattttcaacaagggtgccaacaccattcagtgg i micMur1.scaffold_1595 C 0 C 0 e tupBel1.scaffold_120812.1-13864 2694 153 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=11736.000000 s hg38.chrUn_GL000218v1 32201 3 + 161147 gga- s panTro4.chr2A 18561429 3 - 113622374 gga- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5402116 3 + 72422247 gga- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514656 3 - 123690457 gga- i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049371 3 + 198365852 gga- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141847 3 + 192294377 gga- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188971 3 + 180432695 GGA- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255428 3 + 127223203 aga- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646428 3 + 128169293 gga- i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6195056 3 - 58292249 gga- i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131379 3 - 319779 gga- i micMur1.scaffold_1595 C 0 C 0 s tupBel1.scaffold_120812.1-13864 2847 3 - 13864 -gag i tupBel1.scaffold_120812.1-13864 I 153 I 305 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=89450.000000 s hg38.chrUn_GL000218v1 32204 24 + 161147 aagaagtttgagaactggcacaag s panTro4.chr2A 18561432 24 - 113622374 aagaagtttgaaaactggcccagg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5402119 24 + 72422247 aggaagtttgaaaactggcacagg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514659 24 - 123690457 aagagatttgaaaactggcacagg i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049374 24 + 198365852 aagaagttcaaaaactggcacagt i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141850 24 + 192294377 aagaagttcaaaaactggcacagt i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188974 24 + 180432695 AAGAAGTTCGAAAACTGGCACAGT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255431 24 + 127223203 aagaagttcgaaaactggcacagt i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646431 24 + 128169293 aagaaatttgaaaactgtcacagg i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6195059 24 - 58292249 aacaagttcaaaaactggcacagg i saiBol1.JH378107 C 0 C 0 s micMur1.scaffold_1595 131382 24 - 319779 aagaattttaaaacctggtgctgg i micMur1.scaffold_1595 C 0 C 0 e tupBel1.scaffold_120812.1-13864 2850 305 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=319252.000000 s hg38.chrUn_GL000218v1 32228 77 + 161147 gacaactagat-atgt---aaacatatgcaaaacc----tgga--gtaggacctttacccaacaccatatacaaaaactatgggtgc s panTro4.chr2A 18561456 77 - 113622374 gacaactagat-atgt---agacatatgcaaaacc----tgga--gtaggacctttacccaacaccatgtacaaaaactatggatgc i panTro4.chr2A C 0 I 5 s ponAbe2.chrUn 5402143 77 + 72422247 gacaactagat-gtgt---aaacatatgcaaaacc----tgga--gtaggacctttacccaacaccatatacaaaaactatggatac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514683 77 - 123690457 ggcaaccagat-atgt---aaacatatgcaaaacc----tgga--gttgaacctttacccaacatcatatacaaaaattatggatac i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049398 77 + 198365852 ggcaaccagat-atgt---aaacatatgcaaaacc----tgga--gttgaacctttacccaacatcatatacaaaaactatggatac i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141874 77 + 192294377 ggcaaccagat-atgt---aaacatatgcaaaacc----tgga--gttgaacctttacccaacatcatatacaaaaactatggatac i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104188998 77 + 180432695 GGCAACCAGAT-ATGT---AAACATATGCAAAACC----TGGA--GTTGAACCTTTACCcaacatcatatacaaaaactatGGATAC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255455 77 + 127223203 ggcaaccagat-atgt---aaacatatgcaaaacc----tgga--gttgaacctttacccaacatcatatacaaaaactatggatac i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646455 80 + 128169293 aacaactagataatgt---aaacataggcaaaacc----tgaagtgttggacctttacccaacaccaaatacaaaggctctggatac i calJac3.chr8 C 0 C 0 s saiBol1.JH378107 6195083 79 - 58292249 ggcaactagat-atgt---aaacatatgcaaaacc----tgaagtgttggacctttacccaacaccaaatacaaaagctctggatac i saiBol1.JH378107 C 0 N 0 s micMur1.scaffold_1595 131406 72 - 319779 gacaactggat-atgtatgatacatatgcaaaaacaaaatgaa--tttagaccttt-----ataccatatacagaaatta------- i micMur1.scaffold_1595 C 0 C 0 s tupBel1.scaffold_120812.1-13864 3155 69 - 13864 gacaact---t-atac---atagacatgcaaaaaa----tgaa--ggtagacctttgcctcacaccatatataaaaattatc----- i tupBel1.scaffold_120812.1-13864 I 305 C 0 e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=-8691.000000 s hg38.chrUn_GL000218v1 32305 2 + 161147 --aa s panTro4.chr2A 18561538 2 - 113622374 --aa i panTro4.chr2A I 5 C 0 s ponAbe2.chrUn 5402220 2 + 72422247 --aa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514760 1 - 123690457 ---a i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049475 1 + 198365852 ---a i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141951 1 + 192294377 ---a i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189075 1 + 180432695 ---a i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255532 1 + 127223203 ---a i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646535 1 + 128169293 ---a i calJac3.chr8 C 0 C 0 s tupBel1.scaffold_120812.1-13864 3224 2 - 13864 tt-- i tupBel1.scaffold_120812.1-13864 C 0 I 320 e micMur1.scaffold_1595 131478 0 - 319779 C e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=29968.000000 s hg38.chrUn_GL000218v1 32307 12 + 161147 agtaattggatc s panTro4.chr2A 18561540 12 - 113622374 aaaaaaaggatc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5402222 12 + 72422247 aaaaaatgaatc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94514761 12 - 123690457 gaaaaatggatc i nomLeu3.chr11 C 0 I 290 s rheMac3.chr3 120049476 12 + 198365852 aaaaaatgcatc i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141952 12 + 192294377 aaaaaatgcatc i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189076 12 + 180432695 aaaaaaTGCATC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255533 12 + 127223203 aaaaaatgcatc i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646536 12 + 128169293 aaaaaatgaatc i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 131478 12 - 319779 actcagtggatc i micMur1.scaffold_1595 C 0 C 0 e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=14535.000000 s hg38.chrUn_GL000218v1 32319 4 + 161147 aaat s panTro4.chr2A 18561552 4 - 113622374 aaat i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5402234 4 + 72422247 aaat i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94515063 4 - 123690457 aaat i nomLeu3.chr11 I 290 C 0 s rheMac3.chr3 120049488 4 + 198365852 aaat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141964 4 + 192294377 aaat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189088 4 + 180432695 AAAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255545 4 + 127223203 aaat i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646548 4 + 128169293 aaat i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 131490 4 - 319779 aaag i micMur1.scaffold_1595 C 0 I 605 e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=395558.000000 s hg38.chrUn_GL000218v1 32323 139 + 161147 ggatccattttgagctaatccacataaatgtaaggactaaaactataaaatcctgagaagcaaacatagaagtaaattgtcatgaccttgaatttggcaaagttttcttaaatatgagaccagcaacaagaataaaaat s panTro4.chr2A 18561556 137 - 113622374 ggatccattttgagtgaatccacataaatgtaaggactaaaactataaaatcctgagaagcaaac--aggagtaagttgtcatgaccttggatttggcaaagttttcttaaatatgagaccagcaacaagaataaaaat i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 5402238 139 + 72422247 ggatccattttgagctaatccacataaatgtaaagactaaaactataaaatcctgagaagcaaacataggagtaaattgtcatgatcttggatttggcaaagttttcttaaatatgagaccagcaacaagaataaaaat i ponAbe2.chrUn C 0 N 0 s nomLeu3.chr11 94515067 135 - 123690457 gaatcagttttgaactaatccac----ttgtaagggctaaaactataaaatcctgagaagaaaacatagaagtaaattgtcatgaccctggatttggcaaagctttcttaaatatgagaccagcaacaatgatgaaaat i nomLeu3.chr11 C 0 C 0 s rheMac3.chr3 120049492 139 + 198365852 gaatccacttttaactaatccacataaatgtaagggctaaaactataaaatcctgagaagcagacatagaagtaagttgtcatgaccctggatttggcaaatctttcttaaatatgagaccagaaacaataatacaaat i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114141968 139 + 192294377 gaatccacttttaactaatccacataaatgtaagggctaaaactataaaatcctgagaagcagacatagaagtaagttgtcatgaccctggatttggcaaatctttcttaaatatgagaccagaaacaataatacaaat i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189092 139 + 180432695 GAATCCATTTTGAACTAATCCACATAAATGTAAgggctaaaactataaaatcctgAGAAGCAAACATAGAAGTAAGTTGTCATGACCCTGGATTTGGCAAATCTTTCTTAAATATGAGACCAGAAACAATAATACAAAT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51255549 139 + 127223203 gaatccattttgaactaatccacataaatgtaagggctaaaactataaaatcctgagaagtaaacatagaagtaagttgtcatgaccctggatttggcaaatctttctgaagtatgagaccagaaacaataatacaaat i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49646552 139 + 128169293 ggattcattttgagctaatccacataaatgtaaggactaaaactataaaatcctgagaagcaaacataggactaaattgtcatgaccttggatttggcaaagctttcttaaatatgacaccagcaacaataatacaaat i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=386883.000000 s hg38.chrUn_GL000218v1 32462 141 + 161147 tgatgaactggacttcatcaaaattaaacatttttgcacttc-aaaggacaccatcaagaaagtgaaaagacaactcacaagatggaagaaaatacttgtaaatcatgtgtAGCACTTTTTGATGATAAACTTGAGGAAGAC s panTro4.chr2A 18561693 141 - 113622374 tgatgaattggacttcatcaaaattaaacatttttgcacttc-aaaggacaccatcaagaaactgaaaagacagcccacaagatggaagaaaatacttgcaaatcatgtatAGCACTTTTCGATGGTAAACTTGAGGAAGAC i panTro4.chr2A C 0 I 3 s ponAbe2.chrUn 11799683 141 + 72422247 tgatgaattggacttcatcaaaattaaacatttttgcacttc-aaaggacaccatcaagaaagtgaaaagataacccacaagatggaagaaaatacttgcaaatcatttatAGCACTTTTTGATGGTAAACTTGAGGAAGAC i ponAbe2.chrUn N 0 I 6 s nomLeu3.chr11 94515202 141 - 123690457 cgatgaattggacttcatcaaaattaaacatttttgcacatc-aaaggacaccatcaagaaagtgaaaagacaatccacaagttggaagaaaatacttgcaaatcatgtatAGCACTTTTTGATGGTAAACTTGAGGAAGAC i nomLeu3.chr11 C 0 I 1 s rheMac3.chr3 120049631 141 + 198365852 tgatgaattggacttcatcaaaattaaacagttttgcacgtctaaaggacaccatcaagaaa-tgaaaagacagcccacaagttggaagaaaatacttacaaatcatgtatAGCACTTTTTGATGGTAAACTTGAGGAAGAC i rheMac3.chr3 C 0 I 235 s macFas5.chr3 114142107 141 + 192294377 tgatgaattggacttcatcaaaattaaacagttttgcacgtctaaaggacaccatcaagaaa-tgaaaagacagcccacaagttggaagaaaatacttacaaatcatgtatAGCACTTTTTGATGGTAAACTTGAGGAAGAC i macFas5.chr3 C 0 I 5 s papAnu2.chr3 104189231 126 + 180432695 TGatgaattggacttcatcaaaattaaacagtTTTGCACATCTAAAGGACACCAT----------------CAGCCCACAAGttggaagaaaatacttgcaaatcatgtATAGCACTTTTTGATGGTAAACTTGaggaagac i papAnu2.chr3 C 0 I 5 s chlSab2.chr21 51255688 142 + 127223203 tgttgaattggacttcatcaaaattaaacagttttgcatgtctaatggacaccttcaagaaagtgaaaagacagcccgcaagttggaagaaaatacttgcaaatcatgtatAGCACTTTTTGATGGTAAAGTTGAGGAAGAC i chlSab2.chr21 C 0 I 204 s calJac3.chr8 49646691 141 + 128169293 tgaagaattggacttcatcaaaattaaacatttttgtacttc-aaaggatgccatcaagaaagcaaaaagccaacccacaagatggaagaaaataattgtgaatcatgtatAGCACTTTTTGATGAAGAAGTGGAGGAAGAC i calJac3.chr8 C 0 I 6 e micMur1.scaffold_1595 131494 605 - 319779 I e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=24958.000000 s hg38.chrUn_GL000218v1 32603 17 + 161147 TTTTTTAtttcttattt s panTro4.chr2A 18561837 17 - 113622374 TTTTTTAttttttattt i panTro4.chr2A I 3 C 0 s ponAbe2.chrUn 11799830 17 + 72422247 TTTTTTAttttttgttt i ponAbe2.chrUn I 6 C 0 s nomLeu3.chr11 94515344 17 - 123690457 TTTTTTATCCCTTACCT i nomLeu3.chr11 I 1 C 0 s macFas5.chr3 114142253 17 + 192294377 TTTTTTATCCCTTACCT i macFas5.chr3 I 5 I 213 s papAnu2.chr3 104189362 17 + 180432695 ttttttatccctTACCT i papAnu2.chr3 I 5 I 213 s calJac3.chr8 49646838 17 + 128169293 TTTTTTATTCCTTACCT i calJac3.chr8 I 6 I 212 e micMur1.scaffold_1595 131494 605 - 319779 I e chlSab2.chr21 51255830 204 + 127223203 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=996.000000 s hg38.chrUn_GL000218v1 32620 3 + 161147 tta s panTro4.chr2A 18561854 3 - 113622374 tta i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799847 3 + 72422247 tta i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr11 94515361 3 - 123690457 ATA i nomLeu3.chr11 C 0 N 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=4449.000000 s hg38.chrUn_GL000218v1 32623 16 + 161147 ttatactttaagttct s panTro4.chr2A 18561857 16 - 113622374 ttatactttaagttct i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799850 16 + 72422247 ttatactttaagttct i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3226 320 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=180.000000 s hg38.chrUn_GL000218v1 32639 1 + 161147 a s panTro4.chr2A 18561873 1 - 113622374 a i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799866 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s tupBel1.scaffold_120812.1-13864 3546 1 - 13864 G i tupBel1.scaffold_120812.1-13864 I 320 I 44 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=19834.000000 s hg38.chrUn_GL000218v1 32640 76 + 161147 gggtacatgtgcacaatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgccgcacccattatctc s panTro4.chr2A 18561874 76 - 113622374 gggtacatgggcacaatgtgcaggtttgttacatatgtatacatgtgccatgttggtgtgctgcactcattaactc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799867 76 + 72422247 gggtacatgtgcacaacgtgcaggtttgttacatacgtatacatgtgccatgttggtgtgctgcacccattaactc i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3547 44 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=232.000000 s hg38.chrUn_GL000218v1 32716 6 + 161147 atcatt- s panTro4.chr2A 18561950 6 - 113622374 atcatt- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799943 6 + 72422247 ctcatt- i ponAbe2.chrUn C 0 C 0 s tupBel1.scaffold_120812.1-13864 3591 6 - 13864 -TTTTTT i tupBel1.scaffold_120812.1-13864 I 44 I 255 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=47104.000000 s hg38.chrUn_GL000218v1 32722 183 + 161147 tacattaggtatatctcctaatgctatccctcctccctccccccaccccacgacaggccccggtgtgtgatgttccccatcctgtgtccgagtgttctcattgttcaatttccacctatgaatgagaacat-gtggtgtttggttttctgtccttgcgatagtttgctcagaatgatggtttcc s panTro4.chr2A 18561956 184 - 113622374 tacattaggaatatctcctaatgctatccctcccccctccccccaccccatgacaggccccggtgtgtgatgttccccttcctatgtccacgtgttctcattgttcagttcccacctatgagtgagaacatggtggtgtttggttttctgtccttgcgatagtttgctcagaatgatggtttcc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11799949 183 + 72422247 tacattaggaatatctcctaatgctatccctccccgctccccccaccgcacgacaggccccggtgtgtgatgttccccatcctgtgtccaagtgttctcattgttcagtttccacctatgagtgagaacat-gtggtgtttggttttctgtccttgcgatagtttgctcagagtggtggtttcc i ponAbe2.chrUn C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=546.000000 s hg38.chrUn_GL000218v1 32905 1 + 161147 a s panTro4.chr2A 18562140 1 - 113622374 a i panTro4.chr2A C 0 I 666 s ponAbe2.chrUn 11800132 1 + 72422247 a i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40747975 1 + 122973662 a i nomLeu3.chr1a N 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e papAnu2.chr3 104189379 213 + 180432695 I e macFas5.chr3 114142270 213 + 192294377 I e rheMac3.chr3 120049772 235 + 198365852 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=1365.000000 s hg38.chrUn_GL000218v1 32906 1 + 161147 T s ponAbe2.chrUn 11800133 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40747976 1 + 122973662 t i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050007 1 + 198365852 T i rheMac3.chr3 I 235 C 0 s macFas5.chr3 114142483 1 + 192294377 T i macFas5.chr3 I 213 C 0 s papAnu2.chr3 104189592 1 + 180432695 t i papAnu2.chr3 I 213 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e chlSab2.chr21 51255830 204 + 127223203 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I e panTro4.chr2A 18562141 666 - 113622374 I a score=9555.000000 s hg38.chrUn_GL000218v1 32907 5 + 161147 ATATA s ponAbe2.chrUn 11800134 5 + 72422247 ATATA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40747977 5 + 122973662 atata i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050008 5 + 198365852 ATATA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142484 5 + 192294377 ATATA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189593 5 + 180432695 atata i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256034 5 + 127223203 ATATA i chlSab2.chr21 I 204 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e calJac3.chr8 49646855 212 + 128169293 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I e panTro4.chr2A 18562141 666 - 113622374 I a score=8517.000000 s hg38.chrUn_GL000218v1 32912 8 + 161147 TATATATA s ponAbe2.chrUn 11800139 7 + 72422247 TATATAT- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40747982 8 + 122973662 tgtatata i nomLeu3.chr1a C 0 I 1 s rheMac3.chr3 120050013 7 + 198365852 TATGTAA- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142489 7 + 192294377 TATGTAT- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189598 7 + 180432695 tatgtat- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256039 7 + 127223203 TATGTAT- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647067 7 + 128169293 TATATAT- i calJac3.chr8 I 212 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I e panTro4.chr2A 18562141 666 - 113622374 I a score=298890.000000 s hg38.chrUn_GL000218v1 32920 109 + 161147 GTCAGTTGCTAGGACTGCTGGGCAAGCCTGGGAAAGAGAGTACCTGGGGAAAGCAGCCTCCTGCTCCCCCGTGCCTTCTTTGAGCCTGATGTTCATTTGATGTGGTACT s panTro4.chr2A 18562807 109 - 113622374 gtCAGTTTCCAGGACTGCTGGGCAAGCCTGGGAAAGACAGTACCTGGGGAAAGCAGCCTCCTGCTCCCCTGTGCCTTCTTTGAGCTTGATGATCATTTGATGTGGTACT i panTro4.chr2A I 666 C 0 s ponAbe2.chrUn 11800146 109 + 72422247 GTCAGTTCCCAGGACTGCTGGGCAAGCCTGGGAAAGAGAGTACCTGGAGAAAGCAGCCTCCTGCTCCCCTGTGCCGCCTTTGAGCCTGATGATCATTTGATGTGGTACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40747991 109 + 122973662 gtcaGTTGCCAGGACTGCTGGGCAAGCCTGGGAAAGAGAGTACCTGGGGAATGCAGCCTCCTGCTCCCCTGTGCCCTCTTTGAGCCTAATGATCACTTGATGTGGTACT i nomLeu3.chr1a I 1 C 0 s rheMac3.chr3 120050020 108 + 198365852 GTCAGTTGCCAGGACTGCTGGGCAAGCCTGGTAAAGAGAACAGCGGGGAAAAGCAGCCTCCTACTGCCCTGGGCCTTCTTTGAGCCTGATGATCACTTGATATGGAAC- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142496 108 + 192294377 GTCAGTTGCCAGGACTGCTGGGCAAGCCTGGTAAAGAGAACAGCGGGGAAAAGCAGCCTCCTACTGCCCTGGGCCTTCTTTGAGCCTGATGATCACTTGATATGGAAC- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189605 108 + 180432695 gtcagtTGCCAGGACTGCTGGGCAAGCCTGGTAAAGAGAACAGTGGGGAAAAGCAGCCTCCTACTCCCCTGGGCCTTCTTTGAGCCTGATGATCACTTGATATGGAAC- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256046 108 + 127223203 GTCAGTTGCCAGGACTGCTGGGCAAGCCTGGTAAAGAGAACAGCGGGGAAAAGCAGCCTCCTGCTCCCCTGGGCCTTCTTTGAGCCTGATGATCACTTGATACGGAAC- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647074 109 + 128169293 GTCAGTTGCCAGAACTGCTGGGCAAACCTGGCAAAGAGAACACCCCAGAAAAGCAGCCTCCTACTCCCCTGTGCCTTCTTTGAGCCTGATGATCACTTGACATGGAGCT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 319580 1721 - 788236 I a score=1365.000000 s hg38.chrUn_GL000218v1 33029 1 + 161147 A s panTro4.chr2A 18562916 1 - 113622374 A i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800255 1 + 72422247 A i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748100 1 + 122973662 A i nomLeu3.chr1a C 0 C 0 s rhiRox1.KN296812v1 321301 1 - 788236 A i rhiRox1.KN296812v1 I 1721 n 1721 s calJac3.chr8 49647183 1 + 128169293 A i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e chlSab2.chr21 51256154 0 + 127223203 C e papAnu2.chr3 104189713 0 + 180432695 C e macFas5.chr3 114142604 0 + 192294377 C e rheMac3.chr3 120050128 0 + 198365852 C e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I a score=10398.000000 s hg38.chrUn_GL000218v1 33030 5 + 161147 TATAA s panTro4.chr2A 18562917 5 - 113622374 TATAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800256 5 + 72422247 TATAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748101 5 + 122973662 TATAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050128 5 + 198365852 TAGAA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142604 5 + 192294377 TAGAA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189713 5 + 180432695 TAGAA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256154 5 + 127223203 TAGAA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647184 3 + 128169293 --TAA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 131494 605 - 319779 I e tupBel1.scaffold_120812.1-13864 3597 255 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=7416.000000 s hg38.chrUn_GL000218v1 33035 2 + 161147 TC s panTro4.chr2A 18562922 2 - 113622374 TC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800261 2 + 72422247 TC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748106 2 + 122973662 TC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050133 2 + 198365852 TC i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142609 2 + 192294377 TC i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189718 2 + 180432695 TC i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256159 2 + 127223203 TC i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647187 2 + 128169293 TC i calJac3.chr8 C 0 C 0 s tupBel1.scaffold_120812.1-13864 3852 2 - 13864 TT i tupBel1.scaffold_120812.1-13864 I 255 I 546 e micMur1.scaffold_1595 131494 605 - 319779 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3636.000000 s hg38.chrUn_GL000218v1 33037 2 + 161147 AC- s panTro4.chr2A 18562924 2 - 113622374 AC- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800263 2 + 72422247 AC- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748108 2 + 122973662 AC- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050135 2 + 198365852 AC- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142611 2 + 192294377 AC- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189720 2 + 180432695 AC- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256161 2 + 127223203 AC- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647189 2 + 128169293 AC- i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 132099 2 - 319779 -CT i micMur1.scaffold_1595 I 605 I 641 e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=51877.000000 s hg38.chrUn_GL000218v1 33039 18 + 161147 ATCCAGTTTACCCTTTGA s panTro4.chr2A 18562926 18 - 113622374 ATCCAGGTTAACCTCCGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800265 18 + 72422247 ATCCAGTTTACCCTTTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748110 18 + 122973662 ATCCAGTTTACCCTCTGA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050137 18 + 198365852 ATCCAGTTTACCCTCTGA i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142613 18 + 192294377 ATCCAGTTTACCCTCTGA i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189722 18 + 180432695 ATCCAGTTTACCCTCTGA i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256163 18 + 127223203 ATACACTTTACCCTCTGA i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647191 18 + 128169293 ATCCAGTTTACCCTCTGA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e otoGar3.GL873524 22256168 1854 - 47208961 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=46189.000000 s hg38.chrUn_GL000218v1 33057 15 + 161147 AATTCCTTGATTTTT s panTro4.chr2A 18562944 15 - 113622374 AATTCCTTGATGGTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800283 15 + 72422247 AATTCCTTGATGGTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748128 15 + 122973662 AATTCCTTGATTGTT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050155 15 + 198365852 AATTCCTTGATTGTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142631 15 + 192294377 AATTCCTTGATTGTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189740 15 + 180432695 AATTCCTTGATTGTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256181 15 + 127223203 AATTCCTTGATTGTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647209 15 + 128169293 AATTCCTTGATAGTT i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22258022 15 - 47208961 aagttggtgaatttt i otoGar3.GL873524 I 1854 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e tarSyr2.KE940243v1 17369 6486 + 445202 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=9980.000000 s hg38.chrUn_GL000218v1 33072 5 + 161147 CTTTT s panTro4.chr2A 18562959 5 - 113622374 CTTTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800298 5 + 72422247 CTTTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748143 5 + 122973662 CTTTT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050170 5 + 198365852 GTTTT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142646 5 + 192294377 GTTTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189755 5 + 180432695 GTTTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256196 5 + 127223203 GTTTT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647224 5 + 128169293 CTTTT i calJac3.chr8 C 0 C 0 s tarSyr2.KE940243v1 23855 4 + 445202 -tttt i tarSyr2.KE940243v1 I 6486 N 0 s otoGar3.GL873524 22258037 1 - 47208961 c---- i otoGar3.GL873524 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=171976.000000 s hg38.chrUn_GL000218v1 33077 60 + 161147 CTATATCCTTGACACTGTCCTTTTACAGACCACATAATCTTATCTGGAATACTACAACAG s panTro4.chr2A 18562964 60 - 113622374 CTATATCCTTGACACTGTCCTTTTACAGACCAAGTGATCTTATCTGGAATATTACAACAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800303 60 + 72422247 CTATATCCTTGACTCTTTCCTTTTACAGACCAAATGATCTTATCTGGAATACTACAACAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748148 60 + 122973662 CTATATCCTTGACGCTGTCCTTTTACAGACCAAATGATCTTATCTGGAATACTACAACAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050175 60 + 198365852 CTGTATCCTtgacactgtccttttccagaccaaattatctcatctggaatactgcaatag i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142651 60 + 192294377 CTGTATCCTTGACACTGTCCTTTTCCAGACCAAATTATCTCATCTGGAATACTGCAATAG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189760 60 + 180432695 CTGTATCCTTGACACTGTCCTTTTCCAGACCAAATTATCTCATCTGGAATACTGCAATAG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256201 60 + 127223203 CTATATCCTTGACACTATACTTTTCCAGACCAAATTATCTCATCTGGAATACTGCAATAG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647229 60 + 128169293 CTATATCTTTGACACTGTCCTTTTCCAGACCAAATGATCTCATCTGGAAGACTGAAACAG i calJac3.chr8 C 0 C 0 s otoGar3.GL873524 22258038 46 - 47208961 --atatgctggaca-----------cgtaccaaatgtttttatc-agtatggtagggctg i otoGar3.GL873524 C 0 N 0 e micMur1.scaffold_1595 132101 641 - 319779 I e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=639285.000000 s hg38.chrUn_GL000218v1 33137 220 + 161147 TTTTCTTTTCTCAGTGCTTTTAGAATAACCTGTCAAAAACTCATCTGACTATAGTAGTACCTGCTTACAACCTTTTAATTACTCCCCATTCCCTA-CCAGGCTGTGTAACTCACTTGAGCTCTGCTAGGTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACGTAGGTTACTGGCTGGGTTGACAATCTCAAATTGTAAATCATGA s panTro4.chr2A 18563024 220 - 113622374 TTTTCTTTTCTCAGTGCTTTTAGAATAACCTGTCAAAAACTCATCTGACTATAGTAGTACCTGCTTACAACCTTTTACTTAGTCCCCATTTCCTA-CCGGGCTGTGTAGCTCACTTGAGCTCTCCTAGGTGGTGAGGGAATCTGGGTCCTCTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGGCTGGGTTGACAATCTTAAATTGTAAATCATGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800363 220 + 72422247 TTTTCTTTTCTCAGTGTTTTTAGAATAACCTGTCAAAAACTCATCTGACTATAGTAGTACCTGCTTACAACCTTGTAATTAGTCCCCATTCCTTA-CCAGGCTGTGTAGCGCACTTGAGCCCTGCTAGGTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACATAGGTTACTGGCTGGGTTGACAATCTCAAATTGTAAATCATGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748208 220 + 122973662 TTTTCTTTTCTCAGTGCTTTTAGAATAACCTGTCAAAAACTCATCTGACTGTAGTACTACCTGCTTACAACCTTTTAATTACTCCCCATTCCCTG-CCGGGCTGTGTAGCTCACTTGAGCTCTGCTAGGTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGGCTGGGTTGACAATCTCAAATTGTAAATCATGA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050235 221 + 198365852 ttttcctttctcaatgcttttaGAATAACCTGTCGAAAAGTCATCTGATTATAGTGCTGCCTGCTTAAAACCTTTTAATTACTCCCCATTCCCTGTCTGGGCTGCGTAGCTCACTTGAGCTCTGCTAGCTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGACTGGGTAGACAGTCTCAAATTGTAAATCACGG i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142711 221 + 192294377 TTTTCCTTTCTCAATGCTTTTAGAATAACCTGTCGAAAAGTCATCTGATTATAGTGCTGCCTGCTTAAAACCTTTTAATTACTCCCCATTCCCTGTCTGGGCTGCGTAGCTCACTTGAGCTCTGCTAGCTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGGCTGGGTAGACAGTCTCAAATTGTAAATCACGG i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104189820 221 + 180432695 TTTTCCTTTCTCAACGCTTTTAGAATAACCTGTCGAAAACTCATCTGATTATAGTGCTGCCTGCTTAAAACCTTTTAATTACTCCTCATTCCCTGTCTGGGCTGCGTAGCTCACTTGAGCTCTGCTAGCTGGTGAGGGAATCTGGGTCTTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGGCTGGGTAGACAGTCTCAAATTGTAAATCACGG i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256261 221 + 127223203 TTTTCCTTTCTCAATGCTTTTAGAATAACCTGTCGAAAACTCATCTGATTATAGTGCTGCCTGCTTAAAACCTTTTAATTACTCCCCATTCCCTATCTGGGCTGCGTAGCTCACTTGAGCTCTGCTAGCTGGTGAGGGAATCTGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTACTGGCTGGGTAGACAGTCTCAAATTGTAAATCATGG i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647289 217 + 128169293 TTTTCCTTTCTCAGTGCTTTTAGAATAACCTGTCAAAAACTCATCTGATGATGGTACTGCCTGCTTAAACCCTTTAAATTACTCCCCATTCCCTTCCCAGGATGGGTAGCTCA--TGAGCTCTAATAGCTGGTGAGGGAATATGGGTCCTTTTTCTGGTATTTGAATTCAGTGCTACACAGGTTGCTGGCTGGGTTGACAATCTCAAAT--TAAATCATGA i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e tupBel1.scaffold_120812.1-13864 3854 546 - 13864 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3555.000000 s hg38.chrUn_GL000218v1 33357 2 + 161147 GT- s panTro4.chr2A 18563244 2 - 113622374 GT- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800583 2 + 72422247 GT- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748428 2 + 122973662 GT- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050456 2 + 198365852 GT- i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142932 2 + 192294377 GT- i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104190041 2 + 180432695 GT- i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51256482 2 + 127223203 GT- i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647506 2 + 128169293 GT- i calJac3.chr8 C 0 C 0 s tupBel1.scaffold_120812.1-13864 4400 2 - 13864 -TA i tupBel1.scaffold_120812.1-13864 I 546 N 0 e micMur1.scaffold_1595 132101 641 - 319779 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=647449.000000 s hg38.chrUn_GL000218v1 33359 226 + 161147 AT-ATATGTAGATAGTCTGTCACGATTTACAATAAAACATTGACAT----GTCAGAGATCATGGTGATGTGAGGTTGGGTACTGTCTGTGAGAATTAATTGAGGAAATTTAAATTATATGGTTTTATTTACATAGAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATCTGACTTTCAAGTATCTAAGAGTGGATTATTGTGCTTGTTAAAGTTCTGGGAACCAT s panTro4.chr2A 18563246 231 - 113622374 GTTCTATGTAGATAGTCTGTCACGATTTACAATAGAACATTGACATTTATGTAAAAGATCATGGTGATGTGAGGTTGCATACTGTCTGTGAGAATTAATTGAGGAAATTTAAATTATATGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATCTGACTTTCAAGTATCTAAGAGTGGATCATTGTGCTTGTTAAAGTTCTGGGAACCAT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800585 230 + 72422247 ATGCTATGTAGATAGTCTGTCACGATTCACAATAAAACATTGACATTTATGTCAAAGATCATGGTGATGTGAGGTTGGGTACTGTCTGTGA-AATTAATTGAGGAAATTTAAATTATATGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATGGGACTTTAAAGTATCTAAGAGTGGATCATTGTGCTTGTTAAAGTTCTGGGAACCAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748430 231 + 122973662 ATTCTATGTAGATAGTTTGTCATGATTTACAATAAAACATTGACATTTGTGTCAAAGATCATGGTGATGTGAGGTTGGGTACTGTCTGTGAGAATTAATTGAGGAAATTTAAATTATGTGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATCTGACTTTAAAGTAGCTAAGAGTGGATCATTGTGATTGTTAAAGTTCTGGGAACCAT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050458 231 + 198365852 ATTCCATGTAGATAGTCTGTTACAATCTACAATAAAACATTGATGTTTGTGTCAAAGATCATGGTGTTGTGAGGTTGGGTACTGTCTGTGACAATTTATGGAGGAAATTTAAGTTATATGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCATCATATCTGACTTTAAAGTAGCTAAGAGTGGATCATTGTACTTGTTAAAGGTCTGGGAACCAT i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114142934 231 + 192294377 ATTCCATGTAGATAGTCTGTTACAATCTACAATAAAACATTGATGTTTGTGTCAAAGATCATGGTGTTGTGAGGTTGGGTACTGTCTGTGACAATTTATGGAGGAAATTTAAGTTATATGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCATCATATCTGACTTTAAAGTAGCTAAGAGTGGATCATTGTACTTGTTAAAGGTCTGGGAACCAT i macFas5.chr3 C 0 I 307 s papAnu2.chr3 104190043 231 + 180432695 ATTCCATGTAGATAGTCTGTTACAATGTACAATAAAACATTGATGTTTGTGTCAAAGATCATGGTGTTGTGAGGTTGGGTACTGTCTGTGAGAATTTATTGAGGAAATTTAAGTTATATGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATCTGACTTTAAAGTAGCTAAGAGTGGATCATTGTACTTGTTAAAGGTCTGGGAACcat i papAnu2.chr3 C 0 I 307 s chlSab2.chr21 51256484 231 + 127223203 ATTCCATGTAGATAGTCTGTTACAATCTACAATAAAACGTTGATGTTTGTGTCAAAGATCATGGTGTTGTGAGGTTGGGTACTGTCTGTGAGAATTTATTGAAGAAATTTAAGTTATGTGGTTTTATTCACATATAGTGTATAACAACTAGTTAAGGGATAGATGTCTTCTTATCTGACTTTAAAGTAGCTAAGAGTGGATCATTGTACTTGTTTAAGGTCTGGGAACCAT i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647508 220 + 128169293 ATTCCGT----ATAGTCTGTTACGATTTACAAGAAAATACTGATGTTTGTGTCAAAGATCATGGTGATGTGAGG----GTACTTTCTGTGGGAATTTTTTGAGGAAATTTAAGTTATATGGGTTTATTCACATATAGTGTGTAACAACTAGTTAAGGGGTAGATG---TCTTATCTGACTTTAAAGTAGCTAAGAGTGGATCACTGAACTTGTTAAAGGTCTGGGAACCAC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=9088.000000 s hg38.chrUn_GL000218v1 33585 3 + 161147 GGA s panTro4.chr2A 18563477 3 - 113622374 GGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800815 3 + 72422247 GGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748661 3 + 122973662 GGC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120050689 3 + 198365852 GGC i rheMac3.chr3 C 0 I 597 s macFas5.chr3 114143472 3 + 192294377 GGC i macFas5.chr3 I 307 C 0 s papAnu2.chr3 104190581 3 + 180432695 ggc i papAnu2.chr3 I 307 C 0 s chlSab2.chr21 51256715 3 + 127223203 GGC i chlSab2.chr21 C 0 I 314 s calJac3.chr8 49647728 3 + 128169293 GGC i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=270722.000000 s hg38.chrUn_GL000218v1 33588 97 + 161147 TATTTTCTGAAAATACCTCAGTGATGAGAAATGAATGACTACCAGCCTCTCATAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAG--TGTGTCT s panTro4.chr2A 18563480 97 - 113622374 TATTTTCTGAAAATACCTCAGTGATGACAAATAAATGACTACCAGCCTCTCGTAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAG--TGTGTCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800818 97 + 72422247 TATTTTCTGAAAATACCTCAGTGATGACAAATAAATGACTACCAGCCTATCGTAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAG--TATGTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748664 99 + 122973662 TATTTTCTGAAAATACCTCAGTGATGACAAATAAATGACTACCAGCCTGTCGTAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAAATGGTGTCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120051289 93 + 198365852 TATTTTCTGAAAATAACTCAGTGACGACA----AATGACTACCAGACTATCATAACATTAGGACTCTAGTTCATCCCTTTGCTTCATAAG--TATGTCT i rheMac3.chr3 I 597 C 0 s macFas5.chr3 114143475 93 + 192294377 TATTTTCTGAAAATAACTCAGTGACGACA----AATGACTACCAGACTATCATAACATTAGGACTCTAGTTCATCCCTTTGCTTCATAAG--TATGTCT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104190584 93 + 180432695 tattttctgaaaataactcAGTGATGACA----AATGACTACCAGACTATCATAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAG--TATGTCT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51257032 93 + 127223203 TATTTTCTGAAAATAACTCAGTGATGACA----AATGACTACCAGACTATCATAACATTAGGACTCCAGTTCATCCCTTTGCTTCATAAG--TATGTCT i chlSab2.chr21 I 314 C 0 s calJac3.chr8 49647731 92 + 128169293 TATTTTCTGAAAATACCTCAGTGATGACA----AACGGCTACCAGCCTATCATAACATTAGGACTCCATTTCATCCC-TTGCTTCATAAG--TGTGTCT i calJac3.chr8 C 0 C 0 e micMur1.scaffold_1595 132101 641 - 319779 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=4095.000000 s hg38.chrUn_GL000218v1 33685 1 + 161147 T s panTro4.chr2A 18563577 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800915 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748763 1 + 122973662 T i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120051382 1 + 198365852 T i rheMac3.chr3 C 0 C 0 s macFas5.chr3 114143568 1 + 192294377 T i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104190677 1 + 180432695 T i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51257125 1 + 127223203 T i chlSab2.chr21 C 0 C 0 s calJac3.chr8 49647823 1 + 128169293 T i calJac3.chr8 C 0 C 0 s micMur1.scaffold_1595 132742 1 - 319779 T i micMur1.scaffold_1595 I 641 N 0 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=850260.000000 s hg38.chrUn_GL000218v1 33686 309 + 161147 TTCCTTTTGTATATATTTGCTTTAGTGTAGAAAATAGG-TTTTCTTGATTAGAAATCTAAAAAGAATAAATTGAAAACTGGAGATTTTTCTATTGCTTTGGATTACCAAAA-TTAATGTAATTTGGCAGTATATCCCTGTGCCATTATTGTCTCTCTGGTAAGTAGATGGTAGGGTTTTGGGTGATTAAATTTTTTTTTT-CCTATTTTGCTTATTTAATGGGCATGTGTTTGTATTAAAAAGGGGAAAATACATAGGAATGTAGAAGATGTTAACTAATCGTGAAAGTTATTGGGAAGGGTTACCTAATTT s panTro4.chr2A 18563578 308 - 113622374 TTCCTTTTGTATGTATTTGCTTTAGTATAGAAAATAGG-TTTTCTTGATTAGAAATCTAAGAAGAATAAATTGAAAACTGGAGATTTTTCTATTGCTTTGGATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCTTGTGCCATTATTGTCTCTCTGGTAAGTAGATGGTAGGGCTTTGGGTGATTAAAATTTTTTT---CCTATTTTGCTTATTTAATGGGCATGTGTTTGTATTAAAAAGGGGAAAATAAATAGGAATGTAGAAGATGTTAACTGATCGTGAAAATTATTGGGAAGGGTTACCTAATTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11800916 306 + 72422247 TTCCTTTTGTATGTATTTGCTTTAGTATAGAAAATAGG-TTTTCTTGATTAGAAATCTAAGAAGAATAAATTGAAAACTGGAGATTTTTCTATTGCTTTGGATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCTTGTGCCATTATTG--TTTCTGGTAAGTAGATGGTAGGGCTTTGGGTGATTAAAATTTTTTT---CCTATTTTGCTTATTTAATGGGCATGTGTTTGTATTAAAAAGGGGAAAATAAATAGGAATGTAGAAGATGTTAACTAATTGTGAAAGTTATTGGGAAGGGTTACCTaattt i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40748764 306 + 122973662 TTCCTTTTGTATATATATGCTTTAGTATAGAAAATAGGTTTTTCTTGATTAGAAATCTAAGGAGAATAAATTGAAAACTGGAGATTTTTCTATTGCTTTGAATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCCTGTGCCATTATTGTCTCTCCGGTAAGTAGATGGTAGGCCTTTGGGTGAT--AATATTTTTT---CCTATTTTGCTTATTTAATGGGCATGTGTTTGTATTAAAAAGGGG-AAATAAACAGGAATGTAGAAGATGTTAACTAATCGTGAAAGTTATTGGGAAGGGTTACGTaattt i nomLeu3.chr1a C 0 C 0 s rheMac3.chr3 120051383 309 + 198365852 TTCCTTTTGTATATATTTGCTTTGGTATAGAAAATAGA-TTTTCTTGATTAGAAATCTAAGAAGAAGAAATTGAACACTGGAGGTTTTTCTATTTCTTTGAATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCCTATGCCATTATGATCTCTCCAGTAAGTAGACGGTAGGGCTTAGGAAAATAGGAATTTATTTTT-CCTATTTTGCTTGTTTAATGGCCATGTGTTTGTATTAAAAAGGGA-AAATAAATAGGAATGTAGAGGATGTTAACTAATCGTGACAGTTATTGGGAAGAGTTACCTAATTT i rheMac3.chr3 C 0 N 0 s macFas5.chr3 114143569 309 + 192294377 TTCCTTTTGTATATATTTGCTTTGGTATAGAAAATAGA-TTTTCTTGATTAGAAATCTAAGAAGAAGAAATTGAACACTGGAGGTTTTTCTATTTCTTTGAATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCCTATGCCATTATGATCTCTCCAGTAAGTAGACGGTAGGGCTTAGGAAAATAGGAATTTATTTTT-CCTATTTTGCTTGTTTAATGGCCATGTGTTTGTATTAAAAAGGGA-AAATAAATAGGAATGTAGAGGATGTTAACTAATCGTGACAGTTATTGGGAAGAGTTACCTAATTT i macFas5.chr3 C 0 C 0 s papAnu2.chr3 104190678 309 + 180432695 ttccttttgtatatatttgcttTGGTATAGAAAATAGA-TTTTCTTGATTAGAAATCTAAGAAGAAGAAATTGAACACTGgaggtttttctatttctttgaattaCTAAAAGTTAGTGTAATTTGGCAGTATATCCCTATGCCATTATGATCTCTCCAGTAAGTAGACGGTAGGGCTTAGgaaaataggaatttattttt-cctattttgctTGTTTAATGGCCATGTGTTTgtattaaaaaggga-aaataaataggAATGTAGAGGATGTTAACTAATCGTGACAGTTATTGGGAAGAGTTACCTAATTT i papAnu2.chr3 C 0 C 0 s chlSab2.chr21 51257126 310 + 127223203 TTCCTTTTGTATATATTTGCTTTGGTATAAAAAATAGA-TTTTCTTGATTAGAAATCTAAGAAGAAGAAATTGAACACTGGAGGTTTTTCTATTTCTTTGAATTACTAAAAGTTAGTGTAATTTGGCAGTATATCCCTATGCCATTATGATCTCTCCAGTAAGTAGATGGTAGGGCTTAGGAAAATAGGAATTTTTTTTTCCCTATTTTGGTTGTTTAATGGCCATGTGTTTGTATTAAAAAGGGA-AAATAAATAGGAATGTAGAGGATGTTAACTAATCGTGACAGTTATTGGGAAGGGTTACCTAATTT i chlSab2.chr21 C 0 N 0 s calJac3.chr8 49647824 288 + 128169293 TTCCTTTTGTATGTATTTGCTTTAGTATAGAAAATAGG-TTTTCTTGGTTAGAAATCTAAGAAGAAGAAATTAAACATTGGAGATTTTTCTGTTGCTTTGAATTACCAAAAGTTAGTGTAATTTGGCAGTATATCACTGTGCCATTATTATCTCTCCAGTAAGTGGATGGTAGGGCTTTGGGTGATTAAAATTTTTTT----------TGCTTATTTAATGGGCATACGTTTGTACTGAAAAGGGA-AAATCAATAGGAATGTAGAGGATGTTAACTAATTGTGAAAG------------GTTACCTAATTT i calJac3.chr8 C 0 C 0 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=4296.000000 s hg38.chrUn_GL000218v1 33995 3 + 161147 aaa s panTro4.chr2A 18563886 3 - 113622374 aaa i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801222 3 + 72422247 aaa i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749070 3 + 122973662 aaa i nomLeu3.chr1a C 0 C 0 s macFas5.chr3 114143878 3 + 192294377 GAA i macFas5.chr3 C 0 N 0 s papAnu2.chr3 104190987 3 + 180432695 GAA i papAnu2.chr3 C 0 N 0 s calJac3.chr8 49648112 3 + 128169293 GAA i calJac3.chr8 C 0 N 0 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=238262.000000 s hg38.chrUn_GL000218v1 33998 466 + 161147 agttggccagccatggcaacactgtctgtagtcccagctgtgggggaggctgaggcaagaggatggcttgagtttagaggatggaggttacagtgagctatgattgtgccactgtacttcagcctgagggacagagccagaccctgtctcagaaaaaCCTAGAACAACAACAAACAGAGAGAGGAGCCTGGACGAATTGAGCAATATTAGTGTCCAGGAGCTGCTGTAGTGAtggcttacaacatcaggaatttattctctcacagttctggaggccacaagtccaaaatcaaggtgtgggcagaaatgcactccctctgcagactcttggggaggattcttgtttcttccagctCTGCGACTGTGGTGCCTGCAGCCATTGGAACCAGCTCTGCACGGCTCAGACCTGGGTGATGAGGACACAGCTTTGCAGGTGGGCAGCCACATCCCCAAGGGGAGACTGTGG s panTro4.chr2A 18563889 462 - 113622374 agttggccagccatggcaacactgcctgtagtcccagctgtgggggagactgaagcaagaggatggcttgagcccaggggatggaggttacagtgagctgtgattgtgccactgcacttcagcctgagggacagagccggaccctgtctcagaaaaaCCTAGAACAACAACAAACAGAG----GAGCCTGGACGTATTGAGCTACGTTAGTGTCCGGGGGCTGCTGTAGTGAtggcttacaacatcagaaatttattctcttacagttctggaggccacaagtccaaaatcaaggtgtgggcagaaatgcgctccctctgcagactcttggggaggatccttgcttcttccagGTCTGCGACTGTGGTGCCTGCAGCCACTGGAACCAGCTCTGCACAGCTCAGACCTGAGTGATGAGGACACAGCTTCGCAGGTGGGCGGCCACATCCCCAGGGGGAGCCTGTGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801225 466 + 72422247 agttggccagccatggcaacactgcctgtactcccagctgtgggggaggctgaggcaagaggatggcttgagcccgggggatggaggttacagtgagctatgattgtgccactgcacttcagcctgagggacagagccagaccctgtctcagaaaaaCCTAGAACAACAACAAACAGAGAGAGGAGCCTGGACGTATTGAGCTATATTAGTGTCCGGGGGCTGCTGTAGTGAtggtttacaacatcaggaatttattctctcacagttctggaggccacaagtccaaaatcaaggtgtgggcagaaatgcgctccctctgcagactcttggggaggattcttgcttcttccagctCTGCGACTGTGGTGCCTGCAGCCACTGGAACCAGCTCTGCACGGCTCAGACCTGGGTGATGAGGACACAGCTTTGCAGGTGGGCAGCCACATCCCCAGGGGGAGCCTGTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749073 463 + 122973662 agttggccaggcatggcaacactgcgtgtagtcccagctatgggggaggctgaggcaagaggatggcttgagcccaggggatggaggttacggtgagctatgattgtgccagtgcacttcagtctgagggacagagccggatcctctctcagaaaaaCCCAG-ACAATGACAAACAGAGAGAGGAGCCTGGAGGGATTGAGCtatattagtgtccgggggctgctgtaatgatggcttacaacatcaggaatttattccctcacagttctggaggccacaagtccaaaatcaaggtgtgggcagaaatgcgctccctctgcagactcttggggaggatccttgcttcttccagctCTGCGACTGTGGTGCCTGCAGCCACTGGAACCAGCTCTGCATGGCTCAGACCTG-GTGATGAGGACACAGCTTCTCA-GTGGGCAGCCACATCCCCAGGGGCAGCCTGTGG i nomLeu3.chr1a C 0 I 105 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=5224.000000 s hg38.chrUn_GL000218v1 34464 22 + 161147 GCCTGTGACAGGATAGGGGCAA s panTro4.chr2A 18564351 22 - 113622374 GCCTGTGGCAGGGTTGGGGCAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801691 22 + 72422247 GCCTGTGGCAGGGTTGGGGCAG i ponAbe2.chrUn C 0 C 0 e nomLeu3.chr1a 40749536 105 + 122973662 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=600.000000 s hg38.chrUn_GL000218v1 34486 1 + 161147 G s panTro4.chr2A 18564373 1 - 113622374 G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801713 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s tarSyr2.KE931122v1 12773 1 + 74297 g i tarSyr2.KE931122v1 N 0 I 73 e nomLeu3.chr1a 40749536 105 + 122973662 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=8650.000000 s hg38.chrUn_GL000218v1 34487 40 + 161147 CAGGGCAGGGGCTCCCCATTGT---------TGCTCCTGAGCTCCTGGG s panTro4.chr2A 18564374 49 - 113622374 CAGGGCACGGGCTCCCCATTGTCCCCATTGTTGCCCCTGAGCTCCTGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801714 40 + 72422247 CAGGGCAGGGACTCCGCATTGT---------TGCCTCTGAGCTCCTGGG i ponAbe2.chrUn C 0 C 0 e nomLeu3.chr1a 40749536 105 + 122973662 I e tarSyr2.KE931122v1 12774 73 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=-347.000000 s hg38.chrUn_GL000218v1 34527 4 + 161147 GCTC-- s panTro4.chr2A 18564423 4 - 113622374 GCTT-- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801754 4 + 72422247 GCTT-- i ponAbe2.chrUn C 0 C 0 s tarSyr2.KE931122v1 12847 4 + 74297 --TCCC i tarSyr2.KE931122v1 I 73 I 762 e nomLeu3.chr1a 40749536 105 + 122973662 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=7939.000000 s hg38.chrUn_GL000218v1 34531 32 + 161147 GTGGAGAAAGACAGGTGGATGCGCACATACTG s panTro4.chr2A 18564427 32 - 113622374 GTGGAGAAAGACGGGTGGACGCGCACATACTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11801758 32 + 72422247 GTGGAGAAAGATGGATGGACACGCACATACTG i ponAbe2.chrUn C 0 T 6525 e nomLeu3.chr1a 40749536 105 + 122973662 I e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=10372.000000 s hg38.chrUn_GL000218v1 34563 126 + 161147 CAGCTCCCTGGAtctgagccttggtttccttacctgtgaaatgggCACCCAAGGCAGCTCAGAAGTGTCTGGGAGCATCCCCTGTGGGGGAAGGT-GTGGGGG--GCTGCTGGGCCACAGTCATGGGGA s panTro4.chr2A 18564459 129 - 113622374 CAGCTCCCTGGAtctgagccttggtttccctacctgtgaaatgggCACCCATGGCAGCTCAGAAGTGTCTGGGAGCATCCCCTGTTGGGGAAGGTAGTGGGGGAGGCTGCTGGGGCACAGTCATGGGGG i panTro4.chr2A C 0 C 0 e nomLeu3.chr1a 40749536 105 + 122973662 I e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e ponAbe2.chrUn 11801790 6525 + 72422247 T a score=1473.000000 s hg38.chrUn_GL000218v1 34689 5 + 161147 ACCCC s panTro4.chr2A 18564588 5 - 113622374 ACCCC i panTro4.chr2A C 0 C 0 s nomLeu3.chr1a 40749641 5 + 122973662 ACCCC i nomLeu3.chr1a I 105 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e ponAbe2.chrUn 11801790 6525 + 72422247 T a score=71937.000000 s hg38.chrUn_GL000218v1 34694 142 + 161147 AGTCCCCCTCTCCATGTGCTTCCTTCAATGCTCCCTGATGCCAGAAGACCTGCCCCTGAACAGAGAAGGGCATTCTTGTGAGATCCTTGTGTGGGGGTTTGGTCACAGAGACTCCCCAAGTGCAGGGCAGGGTGGAGGGAGG s panTro4.chr2A 18564593 142 - 113622374 AGTCCCCCTCTCCATGTGCTTCCCTCAATGCTCCCTGATGCCAGCAGACCTGTCCCCGAAAAGAGAGGGGCATTCCTGTGAGTTCCTTGTGTGGAGGATGGGTCACAGAGACTCTCCAGATGCAGGGCAGGGTGGAGGGAGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795265 142 + 72422247 AGTCCCCCCCTCCATGTGCTTCCCTCAATGCTCCCTGATGCCAGCAGACCTGCCCCCGAAAAGAGAGGAGCGTTCCTGTGAGTTCCTTGTGTGGGGGATGGGTCACAGAGACTCTCCAAGTGCAGGGCAGGGTGGAGGGAGC i ponAbe2.chrUn T 6525 C 0 s nomLeu3.chr1a 40749646 142 + 122973662 AGTCCCCCTCCCCATGTGCTTCCCTCAGTGCTCCCTGATGCCAGCAGAGCTGTCCCCGAAAAGAGAGGGGCGTTCCTGTGAGTTCCTTGTGTGGGGGATGGGTCACAGAGACTCCCCAAGTGCAGGGCAGGGTGGAGGGAGG i nomLeu3.chr1a C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=476.000000 s hg38.chrUn_GL000218v1 34836 1 + 161147 C s panTro4.chr2A 18564735 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795407 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749788 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s otoGar3.GL873563 7287868 1 + 14503122 T i otoGar3.GL873563 N 0 I 7 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3699.000000 s hg38.chrUn_GL000218v1 34837 7 + 161147 TGAAGGG s panTro4.chr2A 18564736 7 - 113622374 TGAGGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795408 7 + 72422247 TGAGGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749789 7 + 122973662 TGAGGGG i nomLeu3.chr1a C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7287869 7 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3392.000000 s hg38.chrUn_GL000218v1 34844 7 + 161147 TGGTTGA s panTro4.chr2A 18564743 7 - 113622374 TGGTTGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795415 7 + 72422247 TGGTTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749796 7 + 122973662 TGGTTGA i nomLeu3.chr1a C 0 C 0 s otoGar3.GL873563 7287876 7 + 14503122 AAGCTAT i otoGar3.GL873563 I 7 I 114 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=36383.000000 s hg38.chrUn_GL000218v1 34851 73 + 161147 ATGGACAGGAGAAGAGCTCTCTCCAGTCCCTAGGGTCTGGGTGGCCTGGGGAGCATCCATTTGGGCAGGCAGC s panTro4.chr2A 18564750 73 - 113622374 ATGGCCAGGAGAAGAGCTCTCTCCAGTCCCTCGGGTCTGGGTGGCCTGGGGAGCATCCGTTTGGGCAGGCAGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795422 73 + 72422247 ATGGTCGGGAGAAGAGCTCTCTCCAGTCCTTCAGGTCTGGGTGGCCTGGGGAGCATCCGTTTGTGCAGGCAGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749803 73 + 122973662 AAGGCCAGGAGACGAGCTCTCTCGAGTTCCTCGGGTCTGGGTGGCCTGGGGAGCATCCGTTTGGGCAGGCAGC i nomLeu3.chr1a C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7287883 114 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=910.000000 s hg38.chrUn_GL000218v1 34924 1 + 161147 T s panTro4.chr2A 18564823 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795495 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749876 1 + 122973662 T i nomLeu3.chr1a C 0 C 0 s otoGar3.GL873563 7287997 1 + 14503122 T i otoGar3.GL873563 I 114 I 46 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=13654.000000 s hg38.chrUn_GL000218v1 34925 26 + 161147 GGCAGGGCTGGTGGCTGAGCCACTGT s panTro4.chr2A 18564824 26 - 113622374 GGCGGGGCTGGTGGCTGAGCCACTGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795496 26 + 72422247 GGCGGAGCTGGTGGCTGAGCCACTGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749877 26 + 122973662 GGCGGAGCTGGTGGCTGAGCCACTGT i nomLeu3.chr1a C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7287998 46 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=-1240.000000 s hg38.chrUn_GL000218v1 34951 1 + 161147 -G s panTro4.chr2A 18564850 1 - 113622374 -G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795522 1 + 72422247 -G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749903 1 + 122973662 -G i nomLeu3.chr1a C 0 C 0 s otoGar3.GL873563 7288044 1 + 14503122 C- i otoGar3.GL873563 I 46 I 403 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=46596.000000 s hg38.chrUn_GL000218v1 34952 74 + 161147 GCTCGGGGACCCCAGG-----------------------------------------------------------TGTCTCCTGGACAGAAAGAGCCCTGGTCACTCATGGCTGCAGCATAGCCATGGCGACA s panTro4.chr2A 18564851 133 - 113622374 GCTCGGGGACCCCAGGCCAGGCCAGAGTAGGGTGGGCAGGGAGAGCAGAGGGTGAGTGTACGGGGCGGGACAGCGTGTCTCCTGGACAGAAACAGCCCTGGTCACTCATGGCTGCAGTGTAGCCATGACGACA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795523 133 + 72422247 GCTCAGGGACCCCAGGCCAGGCCAGAGTAGGGTCGGCAGGGAGAGCAGAGGGTGAGTGTACGGGGCAGGACAACGTGTCTCCTGGACAGAAACAGCCCTGGTCACTCATGGCTGCAGCGTAGCCATAGCAACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40749904 133 + 122973662 GCTCGGGGTCCCCATGCCAGGCCGGAGTAGGGTGGGCAGGGACAGCGGAGTGTGGGTGTACGGGGCAGGACAGCGTGTCTCCTGGACAGAAACAGCCCTGGTCACTCATGGCTGCAGCATAGCCATGGCGACA i nomLeu3.chr1a C 0 I 237 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288045 403 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=43771.000000 s hg38.chrUn_GL000218v1 35026 87 + 161147 GGAAAGTGCTGCTGTACATTGTGCTCCTGGGGCTGGCTCCCAATGGACACCCAATGGTATCTCCCCCACTGTAATCTGGGATGCTGG s panTro4.chr2A 18564984 87 - 113622374 GGAAAGTGCTGCTGTACATTGTGCCCCTGGGGCTGGCTCCCAATGGACACCCAACAGCACCTCCTGCACTGTACTGTGGGATGCTGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795656 87 + 72422247 GGTAAGTGCTGCTGTACATTGTGCCCCTGGGGCTGGCTCCCAATGGACACCCAACAGCATCTGCCCCACTGTACTGTGAGATGCTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750274 87 + 122973662 agaaagtgctgctgtacATTGTGCCCCTGGGGCTGGCTCCCAATGGACACCCAATAGCATCTCCCCCACTGTACTGTGGGATGCTGG i nomLeu3.chr1a I 237 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288045 403 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=32021.000000 s hg38.chrUn_GL000218v1 35113 17 + 161147 CAGGGGTGATGGGCACT s panTro4.chr2A 18565071 17 - 113622374 CAGGGGTGCTGGGCACT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795743 17 + 72422247 CAGGGGTGTTGGGCACT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750361 17 + 122973662 CAGGGGTGCTGGGCACT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850057 17 - 112192347 CAGGGGTGCTGGGCACT i rheMac3.chr15 N 0 C 0 s macFas5.chr15 3931633 17 - 112612857 CAGGGGTGCTGGGCACT i macFas5.chr15 N 0 C 0 s chlSab2.chr12 108532323 17 + 108555830 CAGGGGTGCTAGGCACT i chlSab2.chr12 N 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288045 403 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=588650.000000 s hg38.chrUn_GL000218v1 35130 258 + 161147 GGGGTAAGAGCCTTGGCAAGCCCTTCGCTCCCTGGGTGTGAGACCTTGGGCTCCTGGATGCCTGGGTTTCTGTGTCCTATTTTTCCCATGGAAGATGTTTGGGGTGCTCCCACGAAATGGGGAGGGCCCTGGGG-GGTCAGGATTGTATTATTAAAGCCAGAAAGTCTGGGGTTCCATTTTTAGCACAAGGCAGGCAGCCCATGAGCCACAGCCCAGTGGCCAGCCTGTGTGGGA----GGGGAGTGGGGGTCTGAAGGAGTG s panTro4.chr2A 18565088 258 - 113622374 GGGGGAAGAGCCTTGGAAAGCCCTTCCCTCCCTGGGCATCAGACCTTGGGCTCCTGGATGCCTGGGCTTATGTGGCCTATTTTTCCAGTGGAAGATGTTTGGGGTGCTCCCACAAAATGGGGAGGGCCCTGGGGAGGTCAGGATTGTATTATTAAACCCAGAAAGTCTGGGGATCCATTTTTAGCACAAGGCAGGCAGCCCATGAGCCTCAGTCCAGCAGCCAGCCTGTGTGGAA----GGGGAGTGGGG-CCTGTAGGAGCG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11795760 262 + 72422247 GGGGGAAGAGCCTTGGCAAGCCCTGCCATCCCTGGGCATCAGACCTTGGGCTCCTGGATGCCTGGGCTTATGTGGCCTATTTTTCCCGTGGAAGATGTTTGGGGTGCTCCCACAAAATGGGGAGGGCCCTGGGG-AGTCAGGATTGTATTATTAAACGCAGAAAGTCTGGGGTTCCATTTTTAGCACCAGGCAGGCAGCCCGTGAGCCCCAGCCCAGCGGCCAGCCTGTGTGGGAGAGGGGGGAGTGGGGGTCTGAAGGAGTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750378 257 + 122973662 GGGGGAAGAGCCTTGGCAAGCCCTTCCCTCCCTGGGCATCAGACCTTGGGCTCCTGGATGCCTGGGTTCATGTGGCCAATTTTTCCCGTGGAAGATGTTTAGGGTGTTCCCAGAAAATGGCGAGGGCCCTAGGG-GGTCAGGATTGTATTATTAAACCCAGAAAGTCTGGGATTCCATTTTTAGCACAAGTCAGGCAGCCCATGCGTCCCAGCCCAGCGGCCAGCCTGTGTCGA-----GGGGAGTGGGGGCCTGAAGGAGTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850074 260 - 112192347 GGGGGAGGAGCCTTGGCAAGCCCTTCCCTCCCTGGGCACCAGACCTTGGGCTTCTGGATGCCTGGGTTCAAGTATCTAGTTTTTCCTGTGGAAGATGTTTGGGATGTTCCCAGAAAATGGGGAGGGCCCTGGGG-GGTCAGGATTGTATTACTAATCCCAGAAAGTCTGGGGTTCCATTTTTAGCACAAGGCAGGCAACCCATGTGCCCCAGCCCAGCGGCCAGCCTGTGTGGGAGA--GGGGAGTGGGGGCCTGAAGGAGTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3931650 260 - 112612857 GGGGGAGGAGCCTTGGCAAGCCCTTCCCTCCCTGGGCACCAGACCTTGGGCTTCTGGATGCCTGGGTTCAAGTATCTAGTTTTTCCTGTGGAAGATGTTTGGGATGTTCCCAGAAAATGGGGAGGGCCCTGGGG-GGTCAGGATTGTATTACTAATCCCAGAAAGTCTGGGGTTCCATTTTTAGCGCAAGGCAGGCAACCCATGTGCCCCAGCCCAGCGGCCAGCCTGTGTGGGAGA--GGGGAGTGGGGGCCTGAAGGAGTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729217 260 - 107442819 GGGGGAGGAGCCTTGGCAAGCCCTTCCCTCCCTGGGCACCAGACCTTGGGCTCCTggatgcctgggttcaagtgtctGGTTTTTCCTGTGGAAGATGTTTGGGATGTTCCCAGAAAATGGGGAGGGCCCTGGGG-GATCAGGATTGTATTACTAATCCCAGAAAGTCTGGGGTTCCATTTTTAGCACAAGGCAGGCAACCCATGTGCCCCAGCCCAGCGGCCAGCCTGTGTGGGAGA--GGGGAGTGGGGGCCTGAAGGAGTG i papAnu2.chr15 N 0 C 0 s chlSab2.chr12 108532340 260 + 108555830 GGGGGAGGAGCCTTGGCAAACCCTTCCCTCCCTGGGCACCAGACCTTGGGCTCCTGGATGCCTGGGTTCATGTGTGTAGTTTTTCCTGTGGAAGATGTTTGGGATGTTCCCAGAAAATGGGGAGGGCCCTGGGG-GGTCAGGATTGTATTACTAATCCCAGAAAGTCTGGGGTTCCATTTTTAGCGCAAGGCAGGCAACCCATGTGCCCCAGCCCAGCGGCCAGCCTGTGTGGGAGA--GGGGAGTGGGGGCCTGAAGGAGTG i chlSab2.chr12 C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288045 403 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=18305.000000 s hg38.chrUn_GL000218v1 35388 8 + 161147 AGGATCCT s panTro4.chr2A 18565346 8 - 113622374 AGGCTCCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11796022 8 + 72422247 AGGCTTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750635 8 + 122973662 AGGCTCCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850334 8 - 112192347 AGGATCCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3931910 8 - 112612857 AGGATCCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729477 8 - 107442819 AGGATCCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532600 8 + 108555830 AGGATCCT i chlSab2.chr12 C 0 C 0 s otoGar3.GL873563 7288448 8 + 14503122 ATCACCCT i otoGar3.GL873563 I 403 I 243 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=52554.000000 s hg38.chrUn_GL000218v1 35396 28 + 161147 GTTACCGCAGGCTCCACTGCAGCCCTCC s panTro4.chr2A 18565354 27 - 113622374 GTTACCGCAGGCTCCACCGC-GCCCCCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11796030 28 + 72422247 ATTACCGCAGGCTCCACTGCAGCCCCCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750643 28 + 122973662 GTTACCTCAGCCACCACTGCAGCCAGCC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850342 28 - 112192347 ATTACCGCAGCCTCCCCTGCAGCCAGCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3931918 28 - 112612857 ATTACCGCAGCCTCCCCTGCAGCCAGCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729485 28 - 107442819 ATTACCACAGCCTCCCCTGCAGCCAGCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532608 28 + 108555830 ATTACCGCAGCCTCCCCTGCAGCCAGCC i chlSab2.chr12 C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288456 243 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=36591.000000 s hg38.chrUn_GL000218v1 35424 14 + 161147 AGGGTGGCCG-TGTG s panTro4.chr2A 18565381 15 - 113622374 AGGGTGGCCGGTATG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11796058 15 + 72422247 AGGGTGGCCGATGTG i ponAbe2.chrUn C 0 I 6823 s nomLeu3.chr1a 40750671 15 + 122973662 AGCATGGCCAGTGTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850370 15 - 112192347 AGGATGGCTGGTGTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3931946 15 - 112612857 AGGATGGCTGGTGTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729513 15 - 107442819 AGGATGGCCAGTGTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532636 15 + 108555830 AGGATGGCCGGTGTG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21622780 15 - 159171411 AGGGAGGCCGGTGTG i calJac3.chr5 N 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288456 243 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=775484.000000 s hg38.chrUn_GL000218v1 35438 275 + 161147 GGCTGGACAGTGGGCACTGCACCAGGGGCACTGGCGCCGACCTTGAGCCATGCATCTGATGCCTGTGAGAGTGA-TCTCTAGGAGCCACTGCACA-GGGGGCAGATGAGGGAACCCCGACATGGGACAGCCGAGGGCGACCCCAACACGGAGG-GGGCAGCTGTGTCCAGGCTCCACTGGATTCCACAGAGGACAGAACACAGCTCTGACTCTAGGATGTGGGCTCACTG--------AGGGTCA-GGACAGGCTGGGGTTGGGAGAGGGCTATGCT---GCAGCTGGGC s panTro4.chr2A 18565396 276 - 113622374 GGCTGGACAGCGGGCACTGCACCAGGGGCACTGGCGCCGACCTTGAGCCATGCATCTGATGCTTGTGAGAGTGA-TCTCTAGGAACCACTGCACAAGGGGGCAGATGAGGGAACCCCGACGTGGGACAGCCGAGGGTGACCCCAACACGGAGTTGGGCAGCTGTGTCCAGGGTCCACTGGATTCTGCAGAGGACAGAACACAGCTCTGACTCTAGGGTGTGGG-TCACTG--------AGGGTCA-GGACAGGCTGGGGTTGGGAGAGGGCCATGCT---GCAGCTGGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11802896 277 + 72422247 GGCTGGACAGCGGGCACTGCACCAGGGGCTCTGGCGCTGACCTTGAGCCATGCATATGATGGTCGTGAGAGTGA-TGTCTAGGAACCAATGCACGAGGGGGCAGATGAGGGAACCCTGACATGGGACGGCCGAGGGTGACCCCGACACGGAGGGGGACAGCTATGTCCAGGCTCCACTGGATGCCTCGAAGGACAGAACACAGCTCTGACTCTAGGGTGTGGGGTCACTC--------AGGGGTA-GGACAGGCTGGGGTTGGGGGAGGGCCATGCT---GCAGCTGGGG i ponAbe2.chrUn I 6823 C 0 s nomLeu3.chr1a 40750686 277 + 122973662 GGCTGGACAGTGGGCACTGCACCAGGGGCACTGGCGCTGACCTTGAGCCATGCATCTGATGCCTGTGAGAGTGA-TCTCTAGGAACCACTGTACAAGGGGGCAGATGAGGGAACCCTGACATGGGACAGCCGAGGGTGACCCCAACACGGAGGGGGGCAGCTGTGTCCAGGCTCCACTGGATTCCGCAGAGGACAGAACACAGCTCTGACTCTAGGGTGTGGGGTCACTG--------AGGGTTA-GGACAGGCTGGGGTTGGGAGAAGGCCATGCT---GCAGCTGGGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850385 280 - 112192347 GGCTGGACAGCAGGTACTACACTAGGGGCACTGGCGCCGACCTTGAGCCATGCATCTGATGCCTGTGAGAGTGA-TTTCTAGGAACCACTGCACGTGGGGGCAGATGAGGGAACCCCAACATGGGACAGCCGAGGGTGACCCCAACACGGAGGGGGCCAGCTGTGTCCAGGCTCCACTGGATTCCGCAGAGGACAGAACACAGTGCTGACTGTAGGATGTGGGGTCACTG--------AGGGTTA-GGATAGGCTGGGGTTGGGAGAGGGCCATGGTGCAGCAGCTGGGT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3931961 280 - 112612857 GGCTGGACAGCAGGTACTACACTAGGGGCACTGGCGCCGACCTTGAGCCATGCATCTGATGCCTGTGAGAGTGA-TTTCTAGGAACCACTGCACGTGGGGGCAGATGAGGGAACCCCGACATGGGACAGCCGAGGGTGACCCCAACACGGAGGGGGCCAGCTGTGTCCAGGCTCCACTGGATTCCGCAGAGGACAGAACACAGTGCTGACTGTAGGATGTGGGGTCACTG--------AGGGTTA-GGATAGGCTGGGGTTGGGAGAGGGCCATGGTGCAGCAGCTGGGT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729528 278 - 107442819 GGCTGGACAGCAGGTACTACACCAGGGGCACTGGCGCCGACCTTGAGCCATGCATCTGATGCCTGTGAGAGTGATTTTCTAGGAACCACTGCACGTGGGGGCAGATGAGGGAACCCCGACATGGGACAGCCGAGGGTGACCCCAACACGGAGGGGGCCAGCTGTGTCCAGGCTCCAATGGATTCCGCAGAGGACAGAACACAGCGCTGACTGTAGGATGTGGGGTCACTG--------AGGGTTA-GGATAGGCTGGGGTTGGGAGAGGGCCATGGT---GCAGCTGGGT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532651 278 + 108555830 GGCTGGACAGCGGGTACTACACCAGGGGCACTGGTGCCGACCTTGAGCCATGCATCTGATGCCTGTGAGAGAGA-TTTCTAGGAACCACTGCACACGGGGGCAGATGAGGGAACCCCGATATGGGACAGCCGAGGGTGACCCCAACATGGAGGGGGCCAGCTGTGTCCAGGCTCCACTGGATTCCGCAGAGGACAGAACACAGCGCTGACTGTAGGGTGTGGGGTCACTG--------AGGGTTAGGGATAGGCTGGGGTTGGGAGAGGGCCATGCT---GCAGCTGGGT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21622795 265 - 159171411 GGCTGAACAGTGGGCACCGCACCAGGGACAC--------------------GTATCTGATGCCTGTGAGAGTGA-TCTCTTGGAACTACCGCACAAGGGGACAGATGAGGGAACCCCAACACGGGACAGCTGAGGGTGATCCCAACACAGAGGGGAGCAGCTATGTCCAGGCTCCACTGGACTCTGGTGAAGACAGAGCACAGCACTGACTCTAGGGTGCGGGATTACTGACCTGCACAAGATTA-GGACAGGCTGGGTTTGGGAGAGGGCCATGCT---CTAGCTGGGG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288456 243 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=31149.000000 s hg38.chrUn_GL000218v1 35713 10 + 161147 CACATCCCAC s panTro4.chr2A 18565672 10 - 113622374 CACATCCCAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803173 10 + 72422247 CACATCCCAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750963 10 + 122973662 CACATCCCAC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850665 10 - 112192347 CACATCCCAC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932241 10 - 112612857 CACATCCCAC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729806 10 - 107442819 CACATCCCAC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532929 10 + 108555830 CACATCCCAC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623060 9 - 159171411 CACAT-CCAC i calJac3.chr5 C 0 C 0 s otoGar3.GL873563 7288699 10 + 14503122 CCCTGCCCCC i otoGar3.GL873563 I 243 I 925 e tarSyr2.KE931122v1 12851 762 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=234596.000000 s hg38.chrUn_GL000218v1 35723 81 + 161147 CTGCACCCCTCAGATGGCAGGGCCTGGATGTCTCCATCCCCACCCTGACCCGGTCAGTAACAGCCACAGGCCAGCAGCCCC s panTro4.chr2A 18565682 81 - 113622374 CTGCACCCCGCAGATGTCAGGGCCTGGACCTCTCTATTCCCACCCTGACCCGGTCAGTAACAGCCACGGGCCAGCAGCCCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803183 81 + 72422247 CTGCACCCCTCAGATGGCAGGGCCTGGACCTCTCCATCCCCACCCTGACCCGGTCAGTAACAGCCATGGGCCAGCAGCCTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40750973 81 + 122973662 CTGCACCCCTCAGATGGCAGGGCCTGGCCCTCTCCATCCCCACCCTGACCCGGTCAATAATAGCCATGGGCCAGCAGCCCC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850675 81 - 112192347 CTGCACCCCTCAGATGGCAGGACCTGGTCCTCTCCATTCCCACCCCGACCCGGTCAGTAACAGCCACGGGCCAGCAGCCCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932251 81 - 112612857 CTGCACCCCTCAGATGGCAGGACCTGGTCCTCTCCATTCCCACCCCGACCCGGTCAGTAACAGCCACGGGCCAGCAGCCCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729816 81 - 107442819 CTGCACCCCTCAGATGGCAGGACCTGGTCCTCTCCATTCCCAACCCGAGCCGGTCAGTAACAGCCACGCGCCAGCAGCCCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108532939 81 + 108555830 CTGCACCCTTCAGATGGCAGGGCCTGGTCCTCTCCATTCCCACGCCGACCTGGTCAGTAACAGCCACGGGCCAGCAGCCCC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623069 79 - 159171411 CTGCTCCCTTCAGATGGCAGAGCCTGGCCCTCTCTATCCCCACCCTGACCTGGT-AGTAACAGCCATGGGCCAGCAGCCC- i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 12851 762 + 74297 I e otoGar3.GL873563 7288709 925 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=890.000000 s hg38.chrUn_GL000218v1 35804 1 + 161147 C s panTro4.chr2A 18565763 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803264 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751054 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850756 1 - 112192347 T i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932332 1 - 112612857 T i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729897 1 - 107442819 T i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533020 1 + 108555830 T i chlSab2.chr12 C 0 C 0 s tarSyr2.KE931122v1 13613 1 + 74297 T i tarSyr2.KE931122v1 I 762 I 596 e calJac3.chr5 21623148 0 - 159171411 C e otoGar3.GL873563 7288709 925 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=586873.000000 s hg38.chrUn_GL000218v1 35805 197 + 161147 AGCAACCGCTCCCTCCCTGAACTGCCGGGGACAGGAGGTACCATAGTCTCTTCTAGGCAAGAGCTGCTGGAGCCTTCTTTATTCTTGTGCTAGAAGCCCAGGGTGG---------------------------------GGAGAGGAGCCTGAGAACAGCCCAGTGTGGGC-ATCCACCTTCCTGCCCACTTTGGAGGTCTGAATCACCTCCGGCCACTCTCCCAATCCCC s panTro4.chr2A 18565764 220 - 113622374 AGCAACCCCTCCCTCCCTGAACTGCCAGGGACAGGAGGTACCACAGTCTTTTCCAGGCAAGAGCTGCTGGAGCCTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GCTGTGGGCCCAGTGTGGGGAGAGGGGCCTGAGAACAGCCCAGTGTGGGCCATCCACCTTCCTGCCCACTTTGGAGGTCTGAATCACCCCCGGCCACTCTCCCAATCCCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803265 230 + 72422247 AGCAACCCCTCCCTCCCTGAACTGCCGGGGACAGGAGGGACCACAGTCTCTTCCAGGCGAGAGCTGCTGGAGCCTTCTTTATCCTTGCGCTAGAAGCCCAGGGTGGCTGGggtgtgggcccggtgtgggcccagtgtgggGAGAGGGGCCTGAGAACAGCCCAGTGTGGGC-ATCCACCTTCCTGCCCACTTTGGAGGTCTGGATCACCCCCAGCCACTCTCCCAATCccc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751055 217 + 122973662 AGCAACCCCTCCCTCCCTGAACTGCTGGGGACAGGAGGTATC--AGTGTCTTCCAGGCGAGAGCTGCTGGAGCCTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GCTGTGGGCCTAGTGTGGGGAGAGGGGCCTGAGAACAGCCCAGGGTGGGT-GTCCACTTTCCTGCCCACTGTGGAGGACTGAATCACCCCTGGCCACTCTCCCAATCCCC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850757 219 - 112192347 AGCAACCCCTCCCTCCCTGAACTGCAGAGGATGGGACGTACCACAGTCTCTTCCAGGCAAGAGCTGCTGTAGCTTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GGTGTGGGCCCACTGTGGGGAGAGGGGCCTGAGAACAGTCCAGGGTGGGT-GTCCACCTTCCTGCCCACTGTGGAGGCCTGAATCACCCCCAGTCACTCTCCCAATCCCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932333 219 - 112612857 AGCAACCCCTCCCTCCCTGAACTGCAGAGGATGGGACGTACCACAGTCTCTTCCAGGCAAGAGCTGCTGTAGCTTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GGTGTGGGCCCACTGTGGGGAGAGGGGCCTGAGAACAGTCCAGGGTGGGT-GTCCACCTTCCTGCCCACTGTGGAGGCCTGAATCACCCCCAGTCACTCTCCCAATCCCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3729898 207 - 107442819 AGCAACCCCTCCCTCCCTGAACTGCAGAGGATGGGACGTACCACAGTCTCTTCCAGGCAAGAGCTGCTGTAGCTTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GGTGTGGGCCCACTGTGGGGAGAGGGGCCTGAGAACAGTCCAGGGTGGGT-ATCCACCTTCCTGC------------CCTGAATCACCCCCAGTCACTCTCCCAATCCCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533021 218 + 108555830 AGTAACCCCTCCCTCCCTGAACTGCAGAGGATGGGACGTACCACAGTCTCTTCCAGGCAAGAGCTGCTGTAGCTTTCTTTATCCTTGTGCTAGAAGCCCAGGGTGGCTGG-----------GGT-TGGGCCCACTGTGGGGAGAGGGGCCTGAGAACAGTCCAGGGTGGGT-GTCCACCTTCCTGCCCACTGTGGAGGCCTGAATCACCCCCAGTCACTCTCCCAATCccc i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623148 210 - 159171411 --------CTCCCTCCCTGAACTGCAGGGGATGGGAAGTACCACAATCTCTTCCAGGTGAGAGCTGCCAGAGATTACTTTTTCCTTGTGCCAGAAGCCCAGGGTGGCTGG-----------GGTGTGGGCCAAGTGTGGGAAGAGGGCCCTGAG-ACAACCTAGGGTGGGC-ATCCACCTTCCTGTCCACTGTGGTGGCCTGAATCAGCCCCAACCACTCTCCCTGTCCCT i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7288709 925 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=13365.000000 s hg38.chrUn_GL000218v1 36002 5 + 161147 --AGGAG s panTro4.chr2A 18565984 5 - 113622374 --AGGAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803495 5 + 72422247 --aggag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751272 5 + 122973662 --AGGAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850976 5 - 112192347 --AGGAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932552 5 - 112612857 --AGGAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730105 5 - 107442819 --AGGAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533239 5 + 108555830 --aggag i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623358 5 - 159171411 --AGGAG i calJac3.chr5 C 0 C 0 s otoGar3.GL873563 7289634 5 + 14503122 TGTGG-- i otoGar3.GL873563 I 925 I 6 e tarSyr2.KE931122v1 13614 596 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=9690.000000 s hg38.chrUn_GL000218v1 36007 4 + 161147 CCAA s panTro4.chr2A 18565989 4 - 113622374 CCCA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803500 4 + 72422247 ccca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751277 4 + 122973662 CCCA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850981 4 - 112192347 CTCA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932557 4 - 112612857 CTCA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730110 4 - 107442819 CTCA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533244 4 + 108555830 ctca i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623363 4 - 159171411 CCCA i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7289639 6 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=5802.000000 s hg38.chrUn_GL000218v1 36011 2 + 161147 GA s panTro4.chr2A 18565993 2 - 113622374 GA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803504 2 + 72422247 ga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751281 2 + 122973662 GA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850985 2 - 112192347 GG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932561 2 - 112612857 GG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730114 2 - 107442819 GG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533248 2 + 108555830 gg i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623367 2 - 159171411 GG i calJac3.chr5 C 0 C 0 s saiBol1.JH378105 7433687 2 + 72162052 GG i saiBol1.JH378105 N 0 C 0 e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7289639 6 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3360.000000 s hg38.chrUn_GL000218v1 36013 1 + 161147 G s panTro4.chr2A 18565995 1 - 113622374 G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803506 1 + 72422247 g i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751283 1 + 122973662 T i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850987 1 - 112192347 G i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932563 1 - 112612857 G i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730116 1 - 107442819 G i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533250 1 + 108555830 g i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623369 1 - 159171411 G i calJac3.chr5 C 0 I 13 s saiBol1.JH378105 7433689 1 + 72162052 G i saiBol1.JH378105 C 0 I 1882 s otoGar3.GL873563 7289645 1 + 14503122 G i otoGar3.GL873563 I 6 C 0 e tarSyr2.KE931122v1 13614 596 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=9000.000000 s hg38.chrUn_GL000218v1 36014 2 + 161147 GC s panTro4.chr2A 18565996 2 - 113622374 GC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803507 2 + 72422247 gc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751284 2 + 122973662 GC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850988 2 - 112192347 GC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932564 2 - 112612857 GC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730117 2 - 107442819 GC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533251 2 + 108555830 gc i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623383 2 - 159171411 GC i calJac3.chr5 I 13 C 0 s otoGar3.GL873563 7289646 2 + 14503122 GC i otoGar3.GL873563 C 0 I 96 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 13614 596 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=267689.000000 s hg38.chrUn_GL000218v1 36016 89 + 161147 TTCCTGG----AGCAAGCCACACCTGATC-------------TCCACCATGGGTAGGAGTTCAAGGCCAGGCCAACGGGGACTCCACAGAGGGGCCTGTGGGTTAG s panTro4.chr2A 18565998 93 - 113622374 TTCCTGGCTGGAGCAAGCCACACCTGCTC-------------TCCACCATGGGTAGGAGCTCAAGGCCAGGCCGATAGGGACTCCACAGAGGGGCCTGTGGGTTAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803509 89 + 72422247 ttcctgg----agcaagccacatctgatc-------------tccaccatgggtaggagctcaaggccaggccaataggGACTCCACAGAGGGGCCTGTGGGTTAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751286 102 + 122973662 TTCCTGG----AGGAAGCCACACCTGATCTCAAAGCCAGAGTTCCTCCATGGGTAGGAACTCAAGGCCAGGCCAACAGGGACTCCACAGAGGGGCCTGTGGGTTAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3850990 89 - 112192347 TTCCTGG----AGCAAGCCACAGCTGATC-------------TCCACCATGGGTAGGAGCTCCAGGCCAGGTCAACAGGGACTCCACAGAGGGGCCTGTGGGTTAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932566 89 - 112612857 TTCCTGG----AGCAAGCCACAGCTGATC-------------TCCACCATGGGTAGGAGCTCCAGGCCAGGTCAACAGGGACTCCACAGAGGGGCCTGTGGGTTAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730119 89 - 107442819 TTCCTGG----AGCAAGCCACAGCTGATC-------------TCCACCATGGGTAGGAGCTCCAGGCCAGGTCAACAGGGACTCCACAGAGGGGCCTGTGGGTTAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533253 89 + 108555830 ttcctgg----agcaagccacagctgatc-------------tgcaccatgggtaggagctccaggccaggtcaacaggGACTCCACAGAGGGGCCTGTGGGTTAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623385 89 - 159171411 TTCCTAG----AGCAAACCACACCTGATC-------------TACACCATGGATAGCAGCTCAAGGCCAGGCCAACAGGGACTCCACAGAGGGGCCTGTGGGTTAG i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7289648 96 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=4631.000000 s hg38.chrUn_GL000218v1 36105 3 + 161147 -CTG s panTro4.chr2A 18566091 3 - 113622374 -CAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803598 3 + 72422247 -CAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751388 3 + 122973662 -CAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851079 3 - 112192347 -CAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932655 3 - 112612857 -CAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730208 3 - 107442819 -CAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533342 3 + 108555830 -CAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623474 3 - 159171411 -CAG i calJac3.chr5 C 0 C 0 s otoGar3.GL873563 7289744 3 + 14503122 CCT- i otoGar3.GL873563 I 96 I 74 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 13614 596 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=225122.000000 s hg38.chrUn_GL000218v1 36108 81 + 161147 CAGCTGCCAGTGTCCAGATGGCCTCAGGGGTGGGGGTTGGACAATCTGGAGGTCAGCAGGGAATTCAGCATGAGGAGACAG s panTro4.chr2A 18566094 81 - 113622374 CAGCTGCCAGTGTCCAGATGGCCTCAGGGGTTGGGGTTGGACAATCTGAAAGTCAGTAGGGAATTCAGCATGAGGAGACGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803601 81 + 72422247 CAGCTGCCAGTGTCCAGATGGCCTCAGGGGTGGGGGTTGGACAATCTGGAAGTCAGCAGGAAATTCAGCATGAGGAGATGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751391 81 + 122973662 CAGCTGCCAGTGTCCAGATGGCCTCAGGGGTGGGGGTTGGACAATCTGGAGGTCAGCAGGGAATTCAGCATGAGGAGATGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851082 78 - 112192347 CAGCTACTGGTGTCCAGATGGCCTCAGGGGTGGGGGTTAGACAGTCTGGAGGTCAGCAGGGAATTCAGCATGAGG---TGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932658 78 - 112612857 CAGCTACTGGTGTCCAGATGGCCTCAGGGGTGGGGGTTAGACAGTCTGGAGGTCAGCAGGGAATTCAGCATGAGG---TGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730211 78 - 107442819 CAGCTACTGGTGTCCAGATGGCCTCAGGGGTGGGGGTTAGACAGTCTGGAGGTCAGCAGGGAATTCAGCATGAGG---TGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533345 78 + 108555830 CAGCTCCTGGTGTCCAGATGGCTTCAGGGGTGGGGGTTAGACAGTCTGGAGGTCAGCAGGGAATACAGCATGAGG---TGG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623477 74 - 159171411 CAGTTGCCAGTGCCCAGATGGCCTCAGGGGTGGGGG-TGGGCAATCTGGAGGTCAGCAGGGAATTCAGCATGAGG------ i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7289747 74 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=19428.000000 s hg38.chrUn_GL000218v1 36189 7 + 161147 CCCTTAG s panTro4.chr2A 18566175 7 - 113622374 CCCTCAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803682 7 + 72422247 CCCTTAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751472 7 + 122973662 CCCTTAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851160 7 - 112192347 CCCTTAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932736 7 - 112612857 CCCTTAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730289 7 - 107442819 CCCTTAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533423 7 + 108555830 CCCTTAG i chlSab2.chr12 C 0 C 0 s otoGar3.GL873563 7289821 7 + 14503122 CTGCTAG i otoGar3.GL873563 I 74 I 1112 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623551 0 - 159171411 C e tarSyr2.KE931122v1 13614 596 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=993654.000000 s hg38.chrUn_GL000218v1 36196 352 + 161147 GGCTCTGGCCCAGCAGCCCCAGGTGCTGGCTCTGCACTGAGTCATGAAGTTTGTGGGCC-AGGG--GCGTTGGCCTCTCTCTAGCT-GGGAGTGACTTCCATCACTGCTGTCATTAGCCTCCCCTGCATCAACCTGTCCCTGGGGTGGGAGCACAGTGGGCGCAGGGACCGTCAAGCCTCAGTTTTCCCTGCTGTAAAATGCATGTGATAGTGAGGCGGTCATGAGGCCTGAAGGAGTTAAAACCTGCCATGTGATCAGGATGGCACCTAGCTCGGTGCCTCCTAGCCTGGTGCCACCATCCGGCATCAGAGATGAAATACGTCTCCCAGGCCCCCTCCCCTGGCATCCTCCACAC s panTro4.chr2A 18566182 352 - 113622374 AGTTCTGGCCCAGCAGCCCCAGGTGCTGGCTCTGCACTGAGTCATGAAGCTTACAGGCC-AGGG--GCGTTGGCCTCTCTCTAGCT-GGGAGTGACCTACATCACTGCTGTCATTAGCCTCCCCTGCATCAACCTGTTACTGGGATGGGAGCACAGTGGGCGCAGGGACCCTCAGgcctcagttttccctgctgtaaaatgcatgtgatagtgaggctgtcatgaggcctgaaggagttaaaacctgccatgtgctcaggatggcacctagcTCGGTGCCTCCTAGCCTGGTGCCACCATCTGGCCTCAGAGATGAAACACTTCTCCCAGGCCCCCTCCCCTGGCACCCCCCACAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11803689 352 + 72422247 GGTTCTAGCCCCGCAGCGCCAGGTGCTGGCTCTGCACTGAGTCATGAAGCTTACAGGCC-AGGG--GCGTTGGCCTCTCTCTAGCT-GGGAGTGACTTCCATGACTGCTGTCATTAGCCTCCCCTGCATCAACATGTCCCTGGGGTGGGAGCACCGTGGGCGCAGGGACCCTCAGgcctcagttttccctgctgtaaaatgcatgtgatagtgaggctgtcaggaggcctgaaggagttaaaacctgccatgtgctcaggatggcacctagctcaGTGCCTCCTAGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGGCCCCCTCCCCGGGCAACCCCCACAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751479 354 + 122973662 GGTTCTGGCCCAGCAGCCCCAAGTGCTGGCTCTGCACTGAGTCATGAAGCTTGCAGGCC-AGGGGCGCGCTGGCCTCTCTCTAGCT-GGGAGTGACCTCCATCACTGCTGTCATTAGCCTCCCCTGCATCAACCTGTCCTTGGGGTAGGAGCACAGTGGGCGCAGGGACCCTCAGgcctcaattttccctgctgtaaaatgcatgtgatggtgaggctgtcatgaggcctgaaggagttaaaatgtgccatgtgctcaggatggcacctagcTCGGCGCCTCCTCGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGGCCCCCTCCCCTGGCACCCCCCACAC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851167 351 - 112192347 GGTTCTGGCCCAGCAGCCCCAGGGGATGGCTCTGCACCGAGTCATGAAGCTTGCAGGCC--GGG--GCATTGGCCTCTCTCTAGCT-GGGAGTGACGTCCATCACTGCTGTCATTAGCCTTTCCTCAATCAACCTGTCCCTGGGGTGGGAGCACAGTGGGTTCTGGaaccctcaggtctcggttttccctgctgtaaaatgcacatgatagtgaggctgtcatgaggcctgaaggagttaaaatctgccatgtgctcaggatggcacctagcTCGGCGCCTCCCAGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGACCCCCTCCCCTGGAACCCCCCACAC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3932743 351 - 112612857 GGTTCTGGCCCAGCAGCCCCAGGGGATGGCTCTGCACCGAGTCATGAAGCTTGCAGGCC--GGG--GCATTGGCCTCTCTCTAGCT-GGGAGTGACGTCCATCACTGCTGTCATTAGCCTTCCCTCAATCAACCTGTCCCTGGGGTGGGAGCACAGTGGGTTCTGGaaccctcaggtctcggttttccctgctgtaaaatgcacatgatagtgaggctgtcatgaggcctgaaggagttaaaatctgccatgtgctcaggatggcacctagcTCGGCGCCTCCCAGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGACCCCCTCCCCTGGAACCCCCCGCAC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730296 350 - 107442819 GGTTCTGGCCCAGCAGCCCCAGGGGATGGCTCTGCACCGAGTCATGAAGCTTGCAGGCC--GGG--GCATTGGCCTCTCTCTAGCT-GGGAGTGACGTCCATCACTGCTGTCATTAGCCTTCCCTCAATCAACCTGTCCCTGGGGTGGGAGCACAGTGGGTTCTGGAACCCTCAGGTCTCAGTTTTCCCTGCTGTAAAATGCACATGATAGTGAGGCTGTCAT-AGGCCTGAAGGAGTTAAAATCTGCCATGTGCTCAGGATGGCACCTAGCTCGGCGCCTCCCAGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGACCCCCTCCGCTGGAACCCCCCGCAC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533430 352 + 108555830 GGTTCTGGCCCAGCAGCCCCAGGGGATGGCTCTGCACCGAGTCATGAAGCTTGCAGGCC-AGGG--GCATTGGCCTCTCTCTAGCT-GGGAGTGACGTCCATCACTGCTGTCATTAGCCGTCCCTCAATCAACCTGTCCCTGGGGTGGGAGCACAGTGGGTTCTGGaaccctcaggtctcagttttccctgctgtaaactgcacatgatagtgaggctatcatgaggcctgaaggagttaaaatctgccatgtgctcaggatggcacctagcTCGGCGCCTCCCAGCCTGGTGCCACCATCTGGCATCAGAGATGAAACACTTCTCCCAGACCCCCTCCCCTGGAACCCCCCGCAC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623551 330 - 159171411 AGGTCTGGCCCAGCAACCCCAGGGTCTGGTGCTGCACT--GTCATGAAGCCTGGGGGGCTAGGG--CCCTCAGTCTCTCTCTGGCTGGGGAGTCACTCCCATTACTGCTGTCATTGGCCTCCCCTGCATCAACCTGGCCCTGGGGTGGGAGCACAGTGGGTGCAGGGACCC-CAGGCCT--GTTTTCCCTGCTATAAAATGCACGTGATGGTGAGGCTGTCATGAGGCCTAAAGGAGTTCACACCTGCCATGTGCTCAGGATGGCGCCCAGCTCGGCGCCCCCCAGCCTGGTGCCACCAGC-------------------CTTCTCCCAGGCCCCCTTCGCTGGCAGCCCCCACAC i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 13614 596 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=10305.000000 s hg38.chrUn_GL000218v1 36548 4 + 161147 TCAG- s panTro4.chr2A 18566534 4 - 113622374 TCAG- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11804041 4 + 72422247 TCAG- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751833 4 + 122973662 TCAG- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851518 4 - 112192347 TCAG- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3933094 4 - 112612857 TCAG- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730646 4 - 107442819 TCAG- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533782 4 + 108555830 TCAG- i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623881 4 - 159171411 TCAG- i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 14210 4 + 74297 -CTGG i tarSyr2.KE931122v1 I 596 I 1690 e saiBol1.JH378105 7433690 1882 + 72162052 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=150639.000000 s hg38.chrUn_GL000218v1 36552 50 + 161147 CTCTCCATCAGCCACACCCTCCAGGGTGGGACAAGGAGGTCCTGAGACTG s panTro4.chr2A 18566538 50 - 113622374 CTCTCCATCAGCCACCCCCTCCAGGGTGGGACAAGGAGGTCCTGAGCCTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11804045 50 + 72422247 CTGTCTATCAGCCACCCCCTCCAGGGTGGGACAAGGAGGTCCTGAGCCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751837 50 + 122973662 CTCTCCATCAGCCACCCCCTCCAGGGTGGGACAAGGAGGTCCTGAGCCTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851522 50 - 112192347 CTCTCCATCAGCCACCACCTCCAGGGTGGGACAAGGAGGCCCTGCACCTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3933098 50 - 112612857 CTCTCCATCAGCCACCACCTCCAGGGTGGGACAAGGAGGCCCTGCACCTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730650 50 - 107442819 CTCTCCATCAGCCACCACCTCCAGGGTGGGACAAGGAGGCCCTGCACCTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533786 50 + 108555830 CTCTCCATCAGCCACCACCTCCAGGGTGGGACAAGGAGGCCCTGAACCTG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623885 50 - 159171411 CTCTCCATCAGCCAACCCCTCCAGGGTGCAACAAGGAGGCCCTGAGCCTG i calJac3.chr5 C 0 I 5 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3239843.000000 s hg38.chrUn_GL000218v1 36602 1412 + 161147 ATGGGGACCCGACAGGGCTGGGCAGCACCACCTGGGCCTAGGCGATAATGGGAGCCTGAGTGTGGGGCCTGCAGGGAGGGAGCCATTGTTTCTTGGGCTTCTTAGTGGCTACTTCCCTAAAGTCTGGGAGAAGTACTGCTGCTCAAGAGGGGACAGTGCCAGCAGCTCCCTCTGAGGCTGGGGTGGGCACAGCATAGGGGGTCCTCACCCCCA-CCCACCTCCCATGGAGGTTCCTGGCTCTCTTGGAGGACTCCTCGCTACTGTGCTGAGGCTGGCACCAGGGCTGACCAGGCCCAGGATGGTGTTGGACCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCACTGCAGACACCACCCTCCCACAGCTGACCCCTCCCTGGCCATCGTGTCTAGGGTGGCAGGGTGTGAAGCCCCCACCCAACAACCTCCCCCAGCTCAGGGGCCTTTGAGTTCACCACCATCTGCCTCACTGCAGGTTTTCCCTGTGCTGGGTGGGGGTGATTGCAGGGAGATGGTTCTTTGGTATTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTGTCCTGGAACAGCTTTGAGGAGCTACATGGACAGGACACCAACTGTCTGCAGCCCCCAGGTGAGACTTGGCTGCTGTGTCCCACTGCCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCGAATTTAAATGGCACCCCAAAGAATAAGAGTGGGCCTGGGTGTCACTGTAGTGACTGGTGGCTTGTGACA---AGTAGTGTGGCTTCCGTGGTGATGGGAAACGACAGTTCCCCCTGAATCTGCACTGGAGAGAAGGTCCTGGAAGCTTTCGGGCCCACCCTCCAGGGTCTGTGTCTGCATCTCTGAGAGTGGCCGGGTGGGAAGAAGAATCCTCACTGCCTGGCAGTCGGGTTTGGAGCTGGGGAGGGCCGGGCCTGGTTAGCAACGAGCCTATCACAGTGAACCAGAGCTCAAGATAAAGCGAGAGGCCTAGCCCAGACACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGCGGTGGAAGCCAGGCTCCCTCCTCCAGGAAGTCTTCCCTGCACTGCCTGCTCACACACAGCCTCTCCCAGATTTCTCCCCATCCAGGCTGAGTAGGATTCCCAAGAAGGCTCCTCCCCGAGCCAACTGCCTGCAGTCAACATTATCACCTCCCCCAGTGAACGGCAGTAGTGTTTTTCGTCTTCAGCAGTGGCCTCTGGAGGGGTCCTAGCAGGTCGGGGAGAGAGGTCTGAGTTAGCCCCACGTGAAAGGCAGCCCATGCCTCTCCTCCCAGCAACCCCCAGCAGCAACTTCCACCTGGCTGACCCCACCCAGCTCACAGAGCTGCCCAGCTGGGTGTCCTTGTGGTTGATTGGGGG s panTro4.chr2A 18566588 1408 - 113622374 ATGAGGACCCGACAGGGCTGGGCAGTGCCACCTGGGCCTGGGCGATAATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTTTCTTGGGCCTCTTAATGGCTACTTCCCTAGAGTCCGGGAAAAGCCCTGCTGCTCAAGAGGGGACAGTGCCAGCAGCTCCCTCTGAGGCTGGGGTGGGCACAGCATGGGGGG-CCTCACCCCCA-CCCACCTCCCATGGAGGTTCCTGCCTCTCCTGGGGGACTCCTCGCTACTGTGCTGAGGCTGGCACTGGGGCTGACCAGGCCCAGGATGGTGTTGGGCCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCACCACCCACACACACCTGACCCCTCCCTGGCCATCGTGTCTAGGGTGGCAGGGAGTGAAGCCCCCACCCAACAACCTCCCCCAGCTCAGGGGCCTTTGAGTTCACCACCATCTGCTTCACTACAGGTTTTCCCTGTGCTGGG----GGTGATTGCAGGGAGATGGTTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCTCCTGCCTGGTGTCCTGGAGCAGCTTTGAGGAGCTACATGGACAGGACATGAACTGTCTGCAGCCCCCAGGTGAGGCTTGGCTGCTGTGTCCCACTGCCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCGAATTTAAATGGTACCCCAAAGAATAAGAGTGGGCCTGGGTGTTACTGTAGTGACTGGTGGTTTGCGACAGGTAGTAGTGTGGCTTCCGTGGTGACAGGAAGTGACATTTCCCCCTGAATCTGCAGTGGAGAGAAGGTCCTGGAAGCTTTTGGGCCCACCCTCCAGGGTCTGGGTCTGCATCTCCGAGAGTGGCCAGGTGGGTAGAAGAATCTTCCCTGCCTGATAGTCGGGTTTGGAGCTGGGGAGGGCCGGGCCTGGTTAGCAGTGAGCCTATTGCAGTGAACCAGAGC--GAGATAAAGCGAGAGACCCAGCCCAGACACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGCGGTGGAAGCCAGGCTCCCTCCTCCAGGAAGCCCTCCCTGCACTGCCTGCTCACACACAGCCTCTTCCAGATTTCTCCCCATCCAGGCTGAGTAAGATTCCCAAGAGGGCTCGTCCCCGAGGCAACTGCCTGCAGTCAACATTATCACCTCCCCCAGTGAACAGCAGTAGTGTTTTTCGTGTTCAACAGTGGCCTCTGGAGGGGTCCTAGCAGGTTGGGGAGAGAGGTCTGAGTTAGCCCCACGTGAAAGGCAGCCCATGCCTCTCCTCCCAGCAACCCCCAGCAGCAACTTCCACCTGGCTGACCCCACCCAGCTCACAGAGCTGCCCAGCTGGGTGTCCTTGTGGTTGATTGAGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11804095 1391 + 72422247 ATGAGGACCCGACAGGGCTGGGCAGCGCC------GCCTGGGCAATAATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTTTCTTGGGCCTCTTAGTGGCTACTTCCCTAGAGTCCGGGAAAAGTGCTGCTGCTCAAGAGGGGACAGTGCCAGCAGCTCCCTCTGAGGCTGGGGTGAGCACAGCATGGGAAGGCCTTG-CCCCA-CCCACGTCCCATGGAGGTTTCTGGCTCTCCTGGGGGACTCCTCGCTACTGTGCTTAGGCTGGCACCGGAGCTGACCAGGCCCAGGATGGGGTTGGACCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCACCACCCATCCACACCTGATTCCTCCCTGGCCGTCGTGTCTAGGGTGGCAGGGAGTGAAGCCCCCACCCAACAACCTCCCCCAGCTCAGAGGCCTTTGAGTTCGCCACCATCTGCCTCACTGCAGGTTTCCCCTGTGCTGGA----GGTGATTGCAGGGAGATGGTTCTCCGGTGTTCCCTGGGCAGGTCATTGCCTCAGCTCCTGCCT----------AGCAGCTTTGAGGAGCTACATGGACAGGACACCAACTGTCTGCAGCCCCTAGGTAAGGCTTGGCTGCTGTGTCCCACTGCTTCTGCTCCTGGCTGTCAAAAGCCCCAT-GTAACAGCATCCAGGGCGAATTTAAATGGCACCCCAAAGAATAAGAGTGGGTCTGGGTGTCACTGTAGCGACTGGTGGCTTGCGACA---CATAGTGTGGCTTCCGTGGTGACGGGAAGTGACATTTCCCCCTGAATCTGCACTGGAGAGAAGGTCCTGGAAGCTTTTGGGCCCACCCTCCAGGGTCTGGGTCTGCATTTCTGAGAGCAGCCGGGTGGGCAGAAGAATCCTCGCTGCCTGGTAGTCGGGTTTGGAGCTGGGGAGGGCCAGGCCTGGTTAGCAATGAGCCTATTGCAGTGAACCAGAGCTCAAGTTAAAGTGAGAGACCCAGCCCAGACACCTCCTTCCCTGGTCCCAGTCCCTGTGCCTTGGCCTGTGTGGTGGAAGCCAGGCTCCCTCCTCCAGGAAGCCCTCCCTGCACTACCTGCTCACATACAGCCTCTCCCAGATTTCTCCCTATCCAGGCTGAGTAAGATTCCCAAGAAGGCTCCTCCACGAGGCAACTGCCTGCAGTCAACATTATCACCTCCCCCAGTGAACGGCAGTAGTGTTTTCTGTCTTCAGCAGTGGCCTCTGGAGGGGTCCTAGCAGGTCGGGGAGAGAGGTCTGAGTTAGCCCCACGTGAAAGGCAGCCCATGCCTCTCCTCCTAGCAACCCCCAGCAGCAACTTCCACCTGGCTGACCCCACCCAGCTCACAGAGCTGCCCAGCTGGGTGTCCTTGTGGTTGATTGGGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40751887 1407 + 122973662 AGGGGGACCCGACCGGGCTGGGCAGCACCACCTGGGCCTGGGTGATAATGGGAGCCTGAGTGTGGGGTCTGCGTGGAGGGAGCCATTGTCTCTTGGACCTCTTGATGGCTACTTCCCTAGAGTCCGGGAGAAGCACTGCTGCTCAAGAGGGGACAGTGCCAGCAGCTCCCTCTGGGGCTGGGGTGGGTACAGCATGGTGGGGCCTCACCCCCA-CCCACCTCCCATGGAGGTTCCTGGCTCTCCTGGGGGACTCCTTGCTACTGTGCTGAGGCTGGCACCAGGGCTGACCAGGCCCAGGATGGTGTTGGACCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCACCCCCCCCCCATACCTGACCCCTCCCTGGCCATCGTGTCTAGGGTGGCAGGGAGTGAAGCCCCCACCCAACAACCTCCCCCAGCTCAGGGGCCTTTGAGTTCACCAGCATCTGCCTCACTGCAGGTTTCCCCCGTGCTGGG----GGTGATTGCAGGGAGATGGTTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTATCCTGGAGCAGCTTTGAGGAGCTACATGGATAGGACATGAACTGTCTGCAGCCCCCAGGTGAGGCTTGGCTGCTGTGTCTCACTGCCTCTGCTCCT-GCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGTGAATTTAAATGGCACCCCAAAGAATAAGAGTGGGCCTGGTTGTCACTGTAGTGACTGGTGGCTTGCAACA---AGTAGTGTGGCTTCTGTGGTGACGGCAAGTGACATTTCCCCCTGAATCTGCACTGGAGAGAAGGCCCTGGAAGCTTTCGGGCTCACCCTCCAGGGTCTGGGTCTGCATCTCTGAGAGTGGTCAGGTGGGCAGAAGAATGCTCGCTGCCTGGCAGTCGGGTTTGGAGCTGGGGAGGGCTGGGCCTGGTTAGCAATGAGCCTATTGCAGTGAACCAGAGCTCAAGATAAAGTGAGAGGCCCAGCCCAGACACCTCCTGCCCTGGTCTCAGCCCCTGTGCCTTGGCCTGTGCGGTGGAAGTCAGGCTCCGTCCTCCAGGGAGCCCTCCCTGCCCTGCCTACTCACACACAGCCTCTCCCAGATTTCTCCCTATCCAGGCTGAGTAGGATTCCCAAGAAGCCTCCTCCCTGAGGCAACTGCCTGCAGTCAACATTATCACCTTCCCCAGTGAACGGCAGTAGTGTTTTTCGCCTTCAGCAGTGGCCTCTGAAGGGGTCCTAGCAGGTGGGGGAGAGAGGTCTGAGTTAGCCCCACGTGAAAGGCAGCCCATGCCTCTCCTCCTAGCAATCCCCAGCAGCAGCTTCCTCCTGGCTGACCCCACCTAGCTCACAGAGCTGCCTAGCTGGGTGTCCTTGTGGTTGATTGGGGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3851572 1382 - 112192347 ATGGGGACCCAACAGCGCTGGGCAGCGCCACCTGGGTCTGGGCGATAATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTCTCTTGGGCCTCTTAATGGCTACTTCCCTAGAGTCC-AGAGAAGCGCTGCTGCTCAAGGGGGGACAGCGCCAGCAGCTCCCTCTGGGGCTGGAGTGGGCACAGCATGGGGGTACCTTGCCCCCA-CCCACCTCCCATGAAGGTTCCTGGCTCTCCTGGGGGACTCCTCGCTACAGTGCTGAGGCTGACCCTGGGGCTGACCAGGCCCAGGATGGTGTTGGACCCCCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCATCACCCACACACATCTGACCGCTCCCTGACCGTCGTTTCCAGGGTGGCAGGGAGTGAAGTCCCCACCCAATAACCTCCCCCAGTTCAGGGGCCTTTGCGTTCACCAGCAGCTGCCTCACTCCAGGTTTCCCCTGTGCTGGG----GGTGATTGCAGGGAGATGATTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTGTCCTGGAGCAGCTTGGAGAAGTTACATGAACAGGAAACTAACTGTCTGCAGCCCCCAGGTGAGACTTGGCTGCTGTGTCCCGCTGCCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCAAATTTAAATGGCACCCCAGAGAATAAGAGTGGGCCTGGGTATCACTGTCGTGACTGGTGGCTTGCAACA---AGTAGCGTGGCTTCCGTGGTGATGGGAGGTGTCATTT-CCCCTGAATCTGCACTGAAGAGAAGGTCCTGGAAGCTTTCGGGCCCACCCTCCAGGGTCTGGGTCTGTGTCTCTGGGAGTGGCCAGGTGGGCAGAAGAATCCTCGCTGCCTGGCAGTCAGGTTTGGAGCTGGGGAGGGCTGGGCCCAGTTAGCAATGAGCTTATCGCGGTGAACCAGAGCTCAAGATAAAGCGAGAGGCCCAGCCCAGACACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGTGGTGGAAGCCAGGCTGTCTCCTCCAGGAAGCCCTCCCTGCCCTGCCTGCTCACACACAACTTCTCCCAGATTTCTCCCCATCCAGGCTAAGTAGGATTCCCAAGAAGGCTCCACCCCCAGGCAACTGCCTGCAGTCAACATTGTCACCTCCCCCAGTGAGCGGCAGTGGTGTTTTTCCTCTTCAGCAGTGGCCTCTGGAGGGGCCTCAGCAGGTGGGGAAGAGCGGTCTGAGTTAGCCCCACGTGAAAGGCAGCGGATGCCTCTCCTC-----------------------CCACCT-GCTGACCCTACCCAGCTCACAGAACTGCCCAACTAGGTGTCCTTGTGTTTGATTGGGGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3933148 1382 - 112612857 ATGGGGACCCAACAGCGCTGGGCAGCGCCACCTGGGTCTGGGCGATAATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTCTCTTGGGCCTCTTAATGGCTACTTCCCTAGAGTCC-AGAGAAGCGCTGCTGCTCAAGGGGGGACAGTGCCAGCAGCTCCCTCTGGGGCTGGAGTGGGCACAGCATGGGGGTACCTTGCCCCCA-CCCACCTCCCATGAAGGTTCCTGGCTCTCCTGGGGGACTCCTCGCTACAGTGCTGAGGCTGACCCTGGGGCTGACCAGGCCCAGGATGGTGTTGGACCCCCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCATCACCCACACACATCTGACCACTCCCTGACCGTCGTTTCCAGGGTGGCAGGGAGTGAAGTCCCCACCCAATAACCTCCCCCAGTTCAGGGGCCTTTGCGTTCACCAGCAGCTGCCTCACTCCAGGTTTCCCCTGTGCTGGG----GGTGATTGCAGGGAGATGATTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTGTCCTGGAGCAGCTTGGAGAAGTTACATGAACAGGAAACTAACTGTCTGCAGCCCCCAGGTGAGACTTGGCTGCTGTGTCCCGCTGCCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCAAATTTAAATGGCACCCCAGAGAATAAGAGTGGGCCTGGGTATCACTGTCGTGACTGGTGGCTTGCGACA---AGTAGCGTGGCTTCCGTGGTGATGGGAGGTGTCATTT-CCCCTGAATCTGCACTGAAGAGAAGGTCCTGGAAGCTTTCGGGCCCACCCTCCAGGGTCTGGGTCTGTGTCTCTGGGAGTGGCCAGGTGGGCAGAAGAATCCTCGCTGCCTGGCAGTCAGGTTTGGAGCTGGGGAGGGCTGGGCCCAGTTAGCAATGAGCTTATCGCGGTGAACCAGAGCTCAAGATAAAGCGAGAGGCCCAGCCCAGACACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGTGGTGGAAGCCAGGCTGTCTCCTCCAGGAAGCCCTCCCTGCCCTGCCTGCTCACACACAACTTCTCCCAGATTTCTCCCCATCCAGGCTAAGTAGGATTCCCAAGAAGGCTCCACCCCCAGGCAACTGCCTGCAGTCAACATTGTCACCTCCCCCAGTGAGCGGCAGTGGTGTTTTTCCTCTTCAGCAGTGGCCTCTGGAGGGGTCTCAGCAGGTGGGGAAGAGCGGTCTGAGTTAGCCCCACGTGAAAGGCAGCGGATGCCTCTCCTC-----------------------CCACCT-GCTGACCCTACCCAGCTCACAGAACTGCCCAACTAGGTGTCCTTGTGTTTGATTGGGGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3730700 1370 - 107442819 ATGGGGACCCAACAGCGCTGGGCAGCGCCACCTGGGTCTGGGCGATGATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTCTCTTGGGCCTCTTAATGGCTACTTCCCTAGAGTCC-AGAGAAGCGCTGCTGCTCAAGGGGGGACAGCGCCAGCAGCTCCCTCTGGGGCTGGAGTGGGCACAGCATGGTGGTgccttgcccccaccccacctcccatgAAGGTTCCTGGGTCTCCTGGGGGACTCCTCGCTACAGTGCTGAGGCTGACCCCGGGGCTGACCAGGCCCAGGATGGTGTTGGACCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCATCACCCACACACATCTGACCGCTCCCTGACCGTCGTTTCCAGGGTGGCAGGGAGTGAAGTCCCCACCCAATAACCTCCCCCAGTTCAGGGGCCTTT-------------------------CATGTTTCCCCTGTGCTGGG----GGTGATTGCAGGGAGATGATTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTGTCCTGGAACAGCTTGGAGAAGTTACATGAACAGGAAACTAACTGTCTGCAGCCCCCAGGTGAGACTTGGCTGCTGTTTCCTGCTGCCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCAAATTTAAATGGCACCCCAGAGAATAAGAGTGGGCCTGGGTGTCACTGTCGTGACTGGTGGCTTGCGACA---AGTAGCGTGGCTTCCGTGGTGATGGGAGGTGTCATTT-CCCCTGAATCTGCACTGAAGAGAAGGTCCTGGAAGCTTTCGGGCCCACCCTCCAGGGTCTGGGTCTGTGTCTCTGGGAGTGACCAGGTGGGCAGAAGAATCCTCGCTGCCTGGCAGTCAGGTTTGGAGCTGGGGAGGGCTGGGCCCAGTTAGCAATGAGCTTATCGCGGTGAACCAGAGCTCAAGATAAAGCGAGAGGCCCAGCCCAGATACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGTGGTGGAAGCCAGGctgtctcctccaggaagccctccctgccctgcctgctCACACACAACCTCTCCCAGATTTCTCCCCATCCAGGCTAAGTAGGATTCCCAAGAAGGCTCCACCCCCAGGCAACTGCCTGCAGTCAACATTGTCACCTCCCCCAGTGAACGGCAGTGGTGTTTTTCCTCTTCAGCAGTGGCCTCTGGAGGGGTCTCAGCAGGTGGGGAAGGGCGGTCTGAGTTAGCCC-----------CAGCGGATGCCTCTCCTCCCAGCAACCCCCAGCAGCAACTTCCACCT-GCTGACCCTACCCAGCTCACAGAACTGCCCAACTAGGTGTCCTTGTGGTTGATTGGGGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108533836 1394 + 108555830 ATGGGGACCCGACAGGGCTGGGCAGCGCCACCTGGGTCTGGGCGATAATGGGAGCCTGAGTGTGGGGCCTGCATGGAGGGAGCCATTGTCTCTTGGTCCTCTTAATGGCTACTTCCCTAGAGTCC-AGAGAAGCGCTGCTGCTCAAGGGCGGACAGCGCCAGCAGCTCCCTCTGGGGCTGGAGTGGGCACAGCATGGGGGTGCCTTGCCCCCA-CCCACCTCCCATGAAGTTTCCTGGCTCTCCTGGGGGACTCCTCGCTACAGTGCTGAGGCTGACCCCGGGGCTGACCAGACCCAGGATGGTGTGGGACCACCTGCATCCCCCTGCAGCAGGCAGGGAGGGCTCTGCAGCCGTCACCCACACACATCTGACCGCTCCCTGACCGTCGTTTCCAGGGTGGCAGGGAGTGAAGTCCCCACCCAACAACCTCCCCCAGTTCAGGGGCCTTTGAGTTCACCAGCAGCTGCCTCACTCCAGGTTTCCCCTGTGCTGGG----GGTGATTGCAGGGAGATGATTCTTTGGTGTTCCCTGGGCAGGTCATTGCCTCAGCCCCTGCCTGGTGTCCTGGAGCAGCTTGGAGAAGTTACATGAACAGGAAACTAACTGTCTGCAGCCCCCAGGTGAGACGTGGCTGCTGTGTCCCGCTACCTCTGCTCCTGGCTGTC-AAAGCCCCATGGTAACAGCATCCAGGGCAAATTTAAATGGCACCCCAAAGAATAAGAGTGGGCCTGGGTGTCACTGTTGTGACTGGTGGCTTGCGACA---AGTAGCGTGGCTTCCGTGGTGATGGGAGGTGTCATTT-CCCCTGAATCTGCACTGAAGAGAAGGTCCTGGAAGCTTTCAGGCCCACCCTCCAGGGTCTGGGTCTGTGTCTCTGGGAGTGGCCAGGTGGGCAGAAGAATCCTTGCTGCCAGGCAGTCAGGTTTGGAGCTGGGGAGGGCTGGGCCCAGTTAGCAATGAGCTTATCGCAGTGAACCAGAGCTCAAGATAAAGCGAGAGGCCCAGCCCAGACACCTCCTTCCCTGGTCCCAGCCCCTGTGCCTTGGCCTGTGTGGCGGAAGCCAGGCTCTCTCCTCCAGGAAGCCCTCCCGGCCCTGCCTGCTCACACACAGCCTCTCCCAGATTTCTCCCCATCCAGGCTAAGTAGGATTCCCAAGAAGGCTCCACCCCCAGGCAACTGCCTGCAGTCAACATTGTCACCTCCCCCAGTGAACGGCAGTGGTGTTTTTCCTCTTCAGCAGTGGCCTCTGGAGGGGTCTCAGCAGGTGGGGAAGAGCGGTCTGAGTTAGCCC-----------CAGCGGATGCCTCTCCTCCCAGCAACCCCCAGCAGCAACTTCCACCT-GCTGACCCTACCCAGCTCACAGAACTGCCCAACTAGGTGTCCTTGTGGTTGATTGGGGG i chlSab2.chr12 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3600.000000 s hg38.chrUn_GL000218v1 38014 1 + 161147 G s panTro4.chr2A 18567996 1 - 113622374 G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805486 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753294 1 + 122973662 G i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3852954 1 - 112192347 G i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934530 1 - 112612857 G i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732070 1 - 107442819 G i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535230 1 + 108555830 G i chlSab2.chr12 C 0 C 0 s nasLar1.chrUn_JMHX01290491v1 136 1 + 822 G i nasLar1.chrUn_JMHX01290491v1 N 0 I 608 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=258297.000000 s hg38.chrUn_GL000218v1 38015 117 + 161147 AAGGGGCTGTTACCTCCCGGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGCAGATGGGACCCCCACCCACATGCTCTCCAGGTGGATGCCCACCCTGGGCTGT-T s panTro4.chr2A 18567997 117 - 113622374 AAGGGGCTGTTACCTCCCGGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATGTTGGAGATGGGACCCCCACCCACATGCTCTCCAGGTGGATGCCCACTCTGGGCTGT-T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805487 117 + 72422247 AAGGGGCTGTTACCTCCCGGTCCTCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATGTTGGAGATGGGACCCCCACCCACATGCTCTCCGAGTGGATGCCCACCCTGGGCTGT-T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753295 117 + 122973662 AAGGGACTGTTATCTCCCAGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGGAGATGGGACCCCCACCCACATGCTCTCCTGGTGGACGCCCACCCTGGGCTGT-T i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3852955 113 - 112192347 -AGGGGCTGTTACCTCCCAGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGGAGATGGGACTCCCACCCACATGCTCTCCGGGGGG--GTCCATCCTGGGGGGT-- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934531 114 - 112612857 -AGGGGCTGTTACCTCCCAGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGGAGATGGGACTCCCACCCACATGCTCTCCGGGGGG--GTCCATCCTGGGGGGTG- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732071 114 - 107442819 -AGGGGCTGTTACCTCCCAGTCCCCACCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGGAGATGGGACTCCCACCCACATGCTCTCCGGGTGG--GTCCATCCTGGGGGGTG- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535231 113 + 108555830 -AGGGGCTGTTACCTCCCAGTCCCCTCCAGGCTGAGACAAGAGCCCTGTGGGCCTGGATCTTGGAGATGGGACTCCCACCCACATGCTCTCCGGGTGG--GTCCACCCTGGGGGGT-- i chlSab2.chr12 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=1500.000000 s hg38.chrUn_GL000218v1 38132 1 + 161147 C s panTro4.chr2A 18568114 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805604 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753412 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s macFas5.chr15 108680381 1 + 112612857 C i macFas5.chr15 n 0 C 0 s papAnu2.chr15 3732185 1 - 107442819 C i papAnu2.chr15 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e chlSab2.chr12 108535344 0 + 108555830 C e rheMac3.chr15 3853068 0 - 112192347 C e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=27990.000000 s hg38.chrUn_GL000218v1 38133 32 + 161147 TCAGGCCCCTCTCCCCACACTAGGCCCACACC s panTro4.chr2A 18568115 32 - 113622374 TCAGGCCCCTCTCCCCACACTGGGCCTACACC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805605 32 + 72422247 TCAGGCCCCTCTCCCCACACTGGGCCCACACC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753413 32 + 122973662 TCAGGCCCCTCTCCCCACACTGGGCCCCCACC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853068 1 - 112192347 -----------------------G-------- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 108680382 32 + 112612857 TCAGGCCCCTCTCCCCACAGTGGGCCCACACC i macFas5.chr15 C 0 n 0 s papAnu2.chr15 103712779 32 + 107442819 TCAGGCCCCTCTCCCCACAGTGGGCCCACACC i papAnu2.chr15 n 0 C 0 s chlSab2.chr12 108535344 1 + 108555830 -----------------------G-------- i chlSab2.chr12 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=2800.000000 s hg38.chrUn_GL000218v1 38165 1 + 161147 C s panTro4.chr2A 18568147 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805637 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753445 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853069 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934645 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 103712811 1 + 107442819 C i papAnu2.chr15 C 0 n 0 s chlSab2.chr12 108535345 1 + 108555830 C i chlSab2.chr12 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=491598.000000 s hg38.chrUn_GL000218v1 38166 227 + 161147 AGAAGGGAACTCCATGTACCCCTGCCGATCTGCCCATCTGCCCATCTGAGCCTCAGGGGTCCTGGGCACTGAGA----------GCTGGGCTGGGCTGAGCTCAGGTACACACTGTCATTGGGGACAGAGAGGGGATGCTGAAGTGGGTGCTTCTGCGTGGGGCCTGCCTGGAGGATCGCCACGGCAAGTGCACCCAGCAGCCAGACCAGCTTCTAGCAGAATAAGCGCACTGT-CAC----- s panTro4.chr2A 18568148 220 - 113622374 AGGAGGGAACTCCATGTACCCCTGCCG--------ATCTGCCCATCTGAGCCTCAGGGGTCCTGGGCACTGAGA----------GCTGGGCTGGGCTGAGCTCAGGTACACACTGTCATTGGGGACAGAGAGGGGATGCTGAAGCGGGCACTTCTGGGTGGGGCCTGCCTGGAGGATCACCCCAGCAGGTGCACCTAGCAGCCAGACAAGCTTCTAGCAGAGTAAGCGCCCTGTCCAC----- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805638 220 + 72422247 AGGAGGGAACTCCATGTACCCCTGCTG--------ATCTGCCCATCTGAGCCTCAGGGGTCCTGGGCACTGAGA----------GCTGGGCTGGGCTGAGCTCGGGTACACACTGTCATTGGGGACAGAGAGGGGATGCTGAAGGGGGCGCTTCTGGGTGGGGCCTGCCTGGAGGATCACCCCAGCAGGTGTACCCAGCAGCCAGACAAGCTTCTAGCAGAGTAAGCGCCCTGTCCAC----- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753446 230 + 122973662 AGGAGGGAACTCCATGTACTCCTGTCG--------ATCTGTCCATCTGAGCCTCAGGGGTCCTGGGCACTGAGAGTtgggctgcgctgggctgggctgagcttggGTACGCACTGTCATTGGCGACAGAGAGGGGATGCTGAAGTGGGCGCTTCTGGGTGGGGCCTGCCTGGAGGATCACCCCAGCAGGTGCACCCAGCAGCCAGACGAGTTTCTAGCAGAGTAAGCGCCCTGTCCAC----- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853070 228 - 112192347 AGAAGGGAGCTCCATGTACCCCTGGCG--------ATCTGTCCATCTGAGCCTCAGGGGTCCTGGGCActgagc--tgggctggtctgggctgggctgagctgggGTATGCACCGTCATTGGGGACAGAGAGGGGATGCTGAAGCAGGTGCTTCTGGGTGGCGCCTGCCTGGAGGATCACCCCAGCAGGTGCACCCAGCAGCTGGATGAGCCTCTAGTAGAGAAAGTGCCCTGTCCGG----- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934646 228 - 112612857 AGAAGGGAGCTCCATGTACCCCTGGCG--------ATCTGTCCATCTGAGCCTCAGGGGTCCTGGGCActgagc--tgggctggtctgggctgggctgagctgggGTATGCACCGTCATTGGGGACAGAGAGGGGATGCTGAAGCAGGTGCTTCTGGGTGGCGCCTGCCTGGAGGATCACCCCAGCAGGTGCACCCAGCAGCTGGATGAGCCTGTAGTAGAGAAAGTGCCCTGTCCGG----- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732186 227 - 107442819 AGAAGGGAGCT-CATGTACCCCTGGCG--------ATCTGTCCATCTGAGCCTCAGGGGTCCTGGGCACTGAGC--TGGGCTGGTCTGGGCTGGCCTGAGCTGGGGTATGCACTGTCACTGGGGACAGAGAGGGGATGCTGAAGCAGGTGCTTCTGGGTGGCACCTGCCTGGAGGATCACCCCAGCAGGTGCACCCAGCAGCTGGATGAGCCTCTAGTAGAGAAAGTGCCCTGTCCGG----- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535346 233 + 108555830 AGAAGGGAGCTCCATGTACCCCTGCCG--------ATCTGTCCATCTGAGCCTCAGGGGTCCTGGGCActgagc--tgggctggtctgggctgggctgagctgggGTACGCACTGTCATTGGGGACAGAGAGGGGATGCTGAAGCAGGTGCTTCTGGGTGGCGCCTGCCTGGAGGATCACCCCAGCAGGTGCACCCAGCAGCTGGATGAGCCTCTAGTAGAGAAAGTGCCCCGTCtggagggg i chlSab2.chr12 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e calJac3.chr5 21623935 5 - 159171411 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=297770.000000 s hg38.chrUn_GL000218v1 38393 97 + 161147 AGGGGTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGCCGCAAAGATGTCCCAAGGCCCTAAGACTCTG s panTro4.chr2A 18568368 97 - 113622374 AGGAGTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCCCAAAGATGTCCCATGGTCCTAAGACCCTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805858 97 + 72422247 GGGGTTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGAGAGATGCAGAGGTCCCAAAGATGTCGCAAGGCCCTAAGACCCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753676 97 + 122973662 AGGCGTATGTGAGCTGAGGCTGGGGACCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCTCAAAGATGTCCCAAGGCCCTAAGACCCTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853298 96 - 112192347 -GGGGTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCCGAAAGATGTCCCAAGGCTGTAAGACCCTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934874 96 - 112612857 -GGGGTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCCGAAAGATGTCCCAAGGCTGTAAGACCCTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732413 97 - 107442819 AGGGGTATGTGAGCTGAGGCTGGGGGCCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCCGAAAGATGTCCCAAGGCTGTAAGACCCTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535579 97 + 108555830 aggggtatgtgagctgaggctgggggcctggaggtgcagggggaggagatggggagatgcagAGGTCCCAAAGATGTCCCAAGGCTGTAAGACCCTG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21623940 96 - 159171411 AGGGGTATGTGAGCTGCAGCTGGGG-CCTGGAGGTGCAGGGGGAGGAGTTGGGGAGATGCAGAGGTCCCAAAGATGTCCCAAGGCCCAAAGACCCTG i calJac3.chr5 I 5 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7289828 1112 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=9432.000000 s hg38.chrUn_GL000218v1 38490 4 + 161147 ---GTGA s panTro4.chr2A 18568465 4 - 113622374 ---GTGA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805955 4 + 72422247 ---GTGA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753773 4 + 122973662 ---GTGA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853394 4 - 112192347 ---GTGA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934970 4 - 112612857 ---GTGA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732510 4 - 107442819 ---GTGA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535676 4 + 108555830 ---GTGA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21624036 4 - 159171411 ---GTGA i calJac3.chr5 C 0 C 0 s otoGar3.GL873563 7290940 4 + 14503122 CAGG--- i otoGar3.GL873563 I 1112 I 882 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=495440.000000 s hg38.chrUn_GL000218v1 38494 163 + 161147 GGGAATGGAGGAGCCAGCACTGGTGGGGAACTGGGGAGGG-GGAGCTGGGTGGCCTGGCTCTGAGCGGGACACACGGTCTGCGCCCACACTTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCATGTCCTGTCCTCTGAAGCACAGGGATTCCTCGTCGT s panTro4.chr2A 18568469 164 - 113622374 AGGAATGGAGGAGCCAGCACTGGTGGGGAAGTGGGGAGGGAGGAGCTGGATGGCCTGGCTCTGAGCTGGACACACAGTCTGCGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCACTTCCTGTCCTCTCAGGCACAGGGATTCCTGGTTCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11805959 163 + 72422247 AGGAATGGAGAAGCCAGCACTGGTGGGGAAGTGGGGAGGG-GGAGCTGGATGGCCTGGCTCTGAGCTGGACACATGGTCTGTGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCACTTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753777 155 + 122973662 AGGAATGGAGGAGCCAGCACTGG--------TGGGGAGGG-GGAGCTGGATGGCCTGGCTCTGAGCTGGACACATGGTCTGTGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCATGTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853398 163 - 112192347 AGGAATGGAAGAGCCAGCACTGGTGGGGAAGTGGGGAGGG-GGAGCTGGATGGCCTGGCTCTGGGCTGGACACATGGTCTGCGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCACGTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3934974 163 - 112612857 AGGAATGGAAGAGCCAGCACTGGTGGGGAAGTGGGGAGGG-GGAGCTGGATGGCCTGGCTCTGGGCTGGACACATGGTCTGCGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCACGTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732514 163 - 107442819 AGGAATGGAAGAGCCAGCACtggtggggaagtggggaggg-ggagctGGATGGCCTGGCTCTGGGCTGGACACATGGTCTGCGCCCACACCTGAGCTGTGCTGTGGAGCCCCAGTCCCCACCTGGGCACGTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535680 163 + 108555830 AGGAATGGAAGAGCCAGCACTGGTGGGGAAGTGGGGAGGG-GGAGCTGGATGACCTGGCTCTGGGCTGGACACATGGTCTGCGCCCACACCTGAGCTGTGCTGTGGAGCCCCCGTCCCCACCTGGGAACGTCCTGTCCTCTGAGGCACAGGGATTCCTGGTCTT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21624040 160 - 159171411 AGGAAGAGAGGAGGCAGCACTGG---GGGAGCGGAGAGCG-GGAGCTGGATAGCCTGGCCCTGGGCTGGACACACGGTCTGCGACCACACCTGAGCTGTGCTGTGGAGCCCTAGTTGCCACCTGGGCACGTCCTGTCCTCTGAGGCACAGGGACTCCTGGTCCT i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e nasLar1.chrUn_JMHX01290491v1 137 608 + 822 I a score=894.000000 s hg38.chrUn_GL000218v1 38657 1 + 161147 C s ponAbe2.chrUn 11806122 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40753932 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853561 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3935137 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732677 1 - 107442819 C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535843 1 + 108555830 T i chlSab2.chr12 C 0 C 0 s nasLar1.chrUn_JMHX01290491v1 745 1 + 822 C i nasLar1.chrUn_JMHX01290491v1 I 608 N 0 s calJac3.chr5 21624200 1 - 159171411 C i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e panTro4.chr2A 18568633 0 - 113622374 C a score=888488.000000 s hg38.chrUn_GL000218v1 38658 303 + 161147 AGCTCTGACCCCTCTTCTCCAACTGTTGGGATGACGAGTCCATAGGCAGAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGATGGACAGCAACTGGAGGTCCCACCGGG----CACACACACACACTGTGCAGAAAGCTAATGCACTGTTTATTTGGGGGATTGG-GGGGAAGCACCGT-GCCGCTGCTCACTGGTAGCCAGCCAGCTGCAGGATGGGGGTGTAGCAAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGTAACATCCTTCTCCAGGCTCATG s panTro4.chr2A 18568633 303 - 113622374 GGCTCTGACCCCTCATCTCCAACTGTTAGGATGATGAGTCCATAGGCAGAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGATGGACAGCAACTCGAGGTCCCACCGTG----CACACACACACACTGTGCAGAAAGCTAACGTGCTGTTTATTTGGGGGATTGG-GGGGAAGCACCGT-GCTGCTGCTCACTGGTAGCCAGCCAGCTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGCGATGTCCTTCTCCAGGCTCATG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11806123 307 + 72422247 GGCTCTGACCTCTCATCTCCAACTGTTGGGATGATGAGTCCATAGGCACAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGATGGACAGCAACTCGAGGTCCCACCGTGCACACACACACACACACTGTGTAGAAAGCTAACGCGCTGTTTATTTGGGAGATTGG-GGGGAAGCACTGT-GCCGCTGCTTACTGGTAGCCAGCCAGCTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCAAGGCAGCGATGTCCTTCTCCAGGCTCATG i ponAbe2.chrUn C 0 I 142 s nomLeu3.chr1a 40753933 305 + 122973662 GGCTCTGACCCCTCATCTCCCACTGTTGGGATGATGAGTCCATAGGCAGAGCCAGCCTCACGGGGGACCCAAAGGCCAGTTCAGATGGACAGCAAATCGAGGTCCCACCGGG--CACACACACACACACTGTGCAGAAAGCTAATGCGCCGTTTATTTGGGGGATTGT-GGGGAAGCACCGT-GCCGCTGCTCACTGGTAGCCAGCCAGCTGCAGGATGGTGGGGTAGTGAGTACGATGGGCCATGCACTTCTGGCGGTCTATGAAGAGACTGTTGGTCATGGCAGCGATGTCCTTCTCCAGGCTCATG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853562 303 - 112192347 GGCTCTAACCCCTCATCTCCCACCATTGGGATGATGAGTCCGTAGGCAGAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGACGGACAGCAAGTCAAGGTCCCACCGGG------CACACACACTCCGTGCAGAAAGCTAACGTGCTGTTTGTTTGGGGACTTGGCGGGGAAGCACCGTGGCAGCGGCTCACTGGTAGCCAGCCAACTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGTGATGTCCTTCTCCAGGCTCATG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3935138 301 - 112612857 GGCTCTAACCCCTCATCTCCCACCATTGGGATGATGAGTCCGTAGGCAGAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGACGGACAGCAAGTCAAGGTCCCACCGGG------CACACACACT--GTGCAGAAAGCTAACGTGCTGTTTGTTTGGGGACTTGGCGGGGAAGCACCGTGGCAGCGGCTCACTGGTAGCCAGCCAACTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGTGATGTCCTTCTCCAGGCTCATG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732678 303 - 107442819 GGCTCTAACCCCTCATCTCCCACCATTGGGATGATGAGTCCGTAGGCAGAGCCAGCCTCACAGGGGACCCAAAGGCCAGTTCAGATGGACAGCAAGTCGAGGTCCCACCGGG------CACACACACACCGTGCAGAAAGCTAACGTGCTGTTTGTTTGGGGACTTGGCGGGGAAGCACCGTGGCAGCGGCTCACTGGTAGCCAGCCAACTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGTGATGTCCTTCTCCAGGCTCATG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108535844 303 + 108555830 GGCACTAACCCCTCATCTCTCACCATTGGGATGATGAGTCCGTAGGCAGAGCCAGCCTTACAGGGGACCCAAAGGCCAGTTCAGATGGACAGCAAGTCGAGGTCCCACCGGG------CACACACACTGCGTGCAGAAAGCTAACGTGCTGTTTATTTGGGGACTTGGCAGGGAAGCACCGTGGCAGCGGCTCACTGGTAGCCAGCCAACTGCAGGATGGTGGGGTAGCGAGTACGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGACTGTTGGTCATGGCGGTGATGTCCTTCTCCAGGCTCATG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21624201 301 - 159171411 GGCTCTGATCCCTCATCTCCCACAGTTGGGATGATGAGTCCATAGGCAGAGCCAGCCTCACAGGGGACTCAAAAGCCAGCTCAGATGGGCAGCAACTGGAGACCCCACCAGG------CACACACACTCAGTGCAGAAAGCTAACATGCTGTTTATTTGGGGGATGG--GGGGAAGTGCTGTGCCAGCTGCTCACTGGTAGCCAGCCAGCTGCAGGATGGTGGGGTAGCGGGTGCGATGGGCCATGCACTTCTGGCGGTCGATGAAGAGGCTGTTGGTCATGGAGGTGATGTCCTTCTCCAGGCTCATG i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=2120769.000000 s hg38.chrUn_GL000218v1 38961 776 + 161147 TGGATGTCCTCGAGGTTGCAAAGGGACTGCTCCCCTTCTAGAAGCTTCTCCCACAGCGCTGTGATGGACATGTTCAGCTCCTCCACCTCACTCACCAGCTTGGGGGTGTT--GGGTGTGTGAGCTGGGGCTGGGGAGGGCAGAAGTATGCACCTACCGGGGTGCAGGGGA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACGCCATGAAAGG------------ATCCCACCAGGAAAGCGGCTCTAGGGCAGAGCATAAATTACGAGGGTCCTCCCAGGGAGCGCGGGCCTCAGTGGGAATGAGTGACCCGCGTGCAATCTCGACCCTGACAGGACAGGACTGG-CCTCAGCCGACCAGGCTCAGTTCTTTTCATTCCTGAT-ATTTGACGGAAGGAGGCACCCAGTTCCTTGAAGGAACTGAGGGGCAGGGAAGGAAGAAAGGTACTTAGGCTCAGAAGGGGCCACCAGGCATCCGTTAACAAGGGAAACAAAAGGACGGCCCATCTATGCCTGTAGCCCAGGCGTAGGTCATACTTTCCACCAGAGGTGGGGACAGCACCCTCAAGGCAGCAGGGAATGGCCCTCTCTGGCCTCTCTGTCCCCGTGGCCTCCAGGAGCTCACCTTGTCTGAAGGAGCTTCCTCCCGGGAAGATGAGGTAGCACAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAGG-CCCCCGACCCATGACCTGCCCAGTGTCATGTCTATATCTGTGTGTTTAAGGCGTGCTTGCGTGTTGTG s panTro4.chr2A 18568936 773 - 113622374 TGGATGTCCTCGAGGTTGCGCAGGGACTGCTCCGCTTCTAGAAGCTTCTCTCGCAGTGCTGTGAGGGACATGTTCAGCTCCTCCACCTCACTCAACAGCCTGGGGGTGTTGGGGGGGTGTGAGCCGGGGCTGGGGAGGGCAGAAGTATGCACCTACCGGGGTGTAGGGGA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCATGAAAGA------------ACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCGTAAATTACGAGGGTCCTCCCAGGGAGCGTGGGCCTGAGTGGGAATGAGTGACCCGTGTGCAATCTCGACCCTGGCAGGACAGGACTGG-CCTCAGCCGACCAGGCTCAGTTCTTTCCATTCCTGATAACTTGATGGAAGGAGGCCCCCAGTTCCTTGAAGGAACTGAGGGGCAGGGAAAGAAGAAAGGTACTT------AGAAGGGGCCACCGGGCATCCGTTATCAAGGGAAACAAAAGGACGGCACATCTATGCCTGTAGCGCAGGCGTAGGTCATACTTCCCACCAGAGGTGTGGACAGCACCCTTAGGGCAGCAGGGAATGGCCCTGCCTGGCCTCTCTGGCCCTGTGGCCTCCTGGAGCTCACCTTGTCTGAAGGAGCTTCCTCCCGGGAAGATGAGGTAGCATAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAGC-CCCCCGACCCATGACCTGCCCAGTGTCATGTGTATGTCTGTGTGTGTAAGGCGTGCTTGCTTGTTGCG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11806572 774 + 72422247 TGGGTGTCCTCGAGGTTGCGCAGGGACTGCTCCGCTTCTAGAAGCTTCTCCCGCAGCGCTGTGAGGGACATGTTCAGCTCCTCCACCTCACTCGCCAGCCTGGGGGTGTT-GGGGGGTGTGAGCTGGGGCTGGGGAGGGCAGAAGTATGCACCTACTGGGGTGCAGGGGA-CCCAAACCT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCATGAAAGG------------ACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCATAAATTACGAGGGTCCTCCCAGGGAGCGCGGGCCTGAGTGGGAATGAGTGACCCGCGTGCAATCTCGACCCTGGCAGGACAGGACCGG-CCTCAGCCGACCAGGCTCAGTTCGTTCCAGTCCTGAT-ATTTGATGGAAGGAGTC-CCCAGTTCCTTGAAGGAACTGAGAGGCAGGGAAGGAAGAAAGGTACTTAGACTCAGAAGGGGCCACCGGGCATCTGTTAACAAGGGAAACAAAAGGATGGCCCATCTATGTCTCTAGCCCAGGCGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACCCTCAGGGCAGCAGGGAATGGCTCTGCCTGGCCTCTCTGGCCCTGTGGCCTCCTGGAGCTCACCTTGTCTGAAGGAGCTTCCTCCCGGGAAGATGAGGTAGCACAGGGTGGGGTGAGACCGTGTGCGCACA-------GGTCCCTGGCACTGGGAGC-CCCCCGACCCATGACCTGCCCAGTGTCATGTTTATGTC--TCTGTTTAAGGCATGCTTGCGTGTTGCA i ponAbe2.chrUn I 142 C 0 s nomLeu3.chr1a 40754238 777 + 122973662 TGTGTGTCCTCGAGGTTGCGCAGGGACTGCTCTGCTTCTAGAAGCTTCTCCCGCAGCGCTGTGAGGGACATGTTCAGCTCCTCCACCTCACTCACCAGCCTGGGGGTGTT-GAGGGGTGTGAGCCGGGGCTGGGAAGGGCAGAAGTATGCACCTACCGGGGTGCAGGGGA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCATGAAAGG------------ACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCATAAATTACGAAGGTCCTCCCAGGGAGCGCAGGCCTGAGTGGGAATGAGTGACCCGCATGCAATCTCGACCCTGGCAGGACAGGACCAG-CCTCAGCCGACCAGGCTCAGTTCTTTCCATTCCTGAT-GTTTGACGGAGGGAGGCCCCCAGTTCCTTGAAGGAACTGAGGGGCAGAGAAGGAAGAAAGGTACTTAGGCTCAGAAGAGGCCACTGGGCATCTGTTAACAAGGGAAACAAAAGGACGGCCCATCTATGCCCG-AGCCCAGGCGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACCCTCAGGGCAGCAGGGAATGGCCCTGCCTGGCCTCTCTGGCCCTGTGGCGTCCTGGAGCTCACCGTGTCTGAAGGAGCTTCCTCCCGGGAAGATGAGGTAGCACAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGTACTGGGAGCACCCCCCAACCCCGACCTGCCCAGTGTCATATCTATGTCTGTGTGTTTAAGGCATGCTTGTGTGTTGCG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3853865 776 - 112192347 TGGGTGTCCTCGAGGTTGCGCAGGGACTGCTCTGCTTCTAGAAGCTTCTCCCGCAGCGCTGCGAGGGACATGTTCAGTTCCTCCACCTCGCTCACCAGCCTGGGGGTGTT-GGGGAGTATGAGCCGGGGCTGGGGAGGGCAGAAGTATGCACCTTCTGGGGTGCAAGGAA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCGTGAAAGGACCCCTAAGGGAACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCACAAATTACGAGGGTCCTCCCAGGGAGCGCGGG--TGAGTGCGAATGAGTGACCCGCATGCGATCTCGACCCGGGCAGGACAGGACTGGCCCTCAGCCCACCAGGCTAGGTTCTTTCCATTCCTGAT-GTTTAACGGAGGGAGGCCCCCAGTTCCTTGAAGGAACTGAGGGGCAG----GGAAGAAAGGTACTTAGGCTCAGCAGGGGCCACTGGGCATCCGTTAACAAGGGAAACAAAAGGACGGCCCATCTATGCCTGGAGCCCGAGTGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACCCTCAGGGCAGCAGGGAACGGCCCTGCCTGGCTTCTCTGACCCTGTGGCCTCCTGGAGCTCACCTTGTCTGCAGGAGCTTCCTCCCGGGAAGATGAGGCAGCACAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAG--CCCCCCACCCATCACCTGCCCAGGGTCATGTCCATGTCTGTGTGTTTAAGGTGTGC-------TTGCG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3935439 776 - 112612857 TGGGTGTCCTCGAGGTTGCGCAGGGACTGCTCTGCTTCTAGAAGCTTCTCCCGCAGCGCTGCGAGGGACATGTTCAGTTCCTCCACCTCGCTCACCAGCCTGGGGGTGTT-GGGGAGTATGAGCCGGGGCTGGGGAGGGCAGAAGTATGCACCTTCTGGGGTGCAAGGAA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCGTGAAAGGACCCCTAAGGGAACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCACAAATTACGAGGGTCCTCCCAGGGAGCGCGGG--TGAGTGCGAATGAGTGACCCGCATGCGATCTCGACCCGGGCAGGACAGGACTGGCCCTCAGCCCACCAGGCTCGGTTCTTTCCATTCCTGAT-GTTTAACGGAGGGAGGCCCCCAGTTCCTTGAAGGAACTGAGGGGCAG----GGAAGAAAGGTACTTAGGCTCAGCAGGGGCCACTGGGCATCCGTTAACAAGGGAAACAAAAGGACGGCCCATCTATGCCTGGAGCCCAAGTGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACCCTCAGGGCAGCAGGGAACGGCCCTGCCTGGCTTCTCTGACCCTGTGGCCTCCTGGAGCTCACCTTGTCTGCAGGAGCTTCCTCCCGGGAAGATGAGGCAGCACAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAG--CCCCCCACCCATCACCTGCCCAGGGTCATGTCCATGTCTGTGTGTTTAAGGTGTGC-------TTGCG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3732981 777 - 107442819 TGGGTGTCCTCGAGGTTGCGCAGGGACTGCTCTGCTTCTAGAAGCTTCTCCCGCAGCGCTGCGAGGGACATGTTCAGTTCCTCCACCTCGCTCACCAGCCTGGGGGTGTT-GGGGAGTATGAGCCGGGGCTGGGGAGGGCAGAAGTATGCACCTTCTGGGGTGCAAGGAA-CCCAAAACT-------CGCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCCGTGAAAGGACCCCTAAGGGAACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCACAAATTACGAGGGTCCTCCCAGGGAGCGCGGG--TGAGTGCGAATGAGTGACCCGCATGCGATCTCGACCCGGGCAGGACAGGACTGGCCCTCAGCCCACCAGGCTCGGTTCTTTCCATTCCTGAT-GTTTAACGGAGGGAGGCCCCCAGTTCCTTGAAGGAACTGAGGGGCAG----GGAAGAAAGGTACTTAGGCTCAGCAGGGGCCACTGGGCATCCGTTAACAAGGGAAACAAAAGGACGGCCCATCTATGCCTGGAGCCCGAGCGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACCCTCAGGGCAGCAGGGAATGGCCCTGCCTGGCTTCTCTGGCCCTGTGGCCTCCTGGAGCTCACCTTGTCTGCAGGAGCTTCCTCCCGGGAAGATGAGGCAGCACAGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAGc-ccccccACCCATCACCTGCCCAGGGTCATGTCCATGTCTGTGTGTTTAAGGTGTGC-------TTGCG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108536147 776 + 108555830 TGGGTGTCCTCGAGGTTGCGCAGGGACTGCTCTGCTTCTAGAAGCTTCTCCCGCAGCGCTGCGAGGGACATGTTCAGTTCCTCCACCTCGTTCACCAGCCTGGGGGTGTT-GGGGAGTATGAGCCGGGGCTGGGGAGGGCAGAAGTATGCACCTTCCGGGGTGCAAGGAA-CCCAAAACT-------CCCAATGGGAGCTGGCAGGAGGTCCTGGGAAGACTCTGTGAAAGGACCCCTAAGGGAACCCCACCAGGAAAGCGGCTCTAGGGCAGAGCACAAATTACAAGGGTCCTCCCAGGGAGTGCGGG--CGAGTGCGAATGAGTGACCGGCATGCCGTCTCGACCCTGGCAGGACAGGACTGGCCCTCAGCCCACCAGGCTCGGTTCTTTCCATTCCTGAT-GTTTAACGGAGGGAGGCCCCCAGCTCCTTGAAGGAACTGAGGGGCAG----GGAAGAAAGGTACGTAGGCTCAGCAGGGGCCACTGGGCATCCGTTAACAAGGGAAACGAAAGGACGGCCCATCTATGCCTGGAGCCCGAGCGTAGGTCATACTTTCCACCAGAGGTGTGGACAGCACGCTCAGGGCAGCAGGGAACGGCCCTGCCTGGCCTCTCTGGCCCTGTGGCCTCCTGGAGCTCACCTTGTCTGCAGGAGCTTCCTCCCGGGAAGATGAGGCGGCACGGGGTGGGGTGAGACCACGTGGGCACA-------GGTCCCTGGCACTGGGAG--CCCCCCACCCATCACCTGCCCAGGGTCATGTCCATGTCTGTGTGTTTAAGGTGTGC-------TTGCG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21624502 686 - 159171411 CGGGTGTCCTCCAGGTTGCGCAGGGACTGCTCCGCTTCTAGAAGCTTCTCCCGCAGCGCTGCAAGGGACATGTTCAGCTCCTCTACCTCGCTCATCAACCTGGGGGTGTT-GAGGGATGTGAGCCAGGGCTGGGGAGGGCAGAAGTGTGCACCTTCCTGGCAGTGGGGGACCCCAAAACTCACAGGCCCCAACTGGAGCGGGCAGGAGGTCCTGGTAAGACTC-ACAAAAGAACTCCTAAGGGAACCCCACCAGGAAAGTGGCC------------------------------------------------------------------------------------------------------TCTCAGCCCACCAGGCTCAGTTCTTGCCATTCCTTAT-GTCT----GAGGGAGGCCCCCAGTTCCTGGAAGGAACTGAGAGGCAGGGAAGGAAGAAAGGTTCTTATGCTCAGGAGGGGCCACTGAGCACCTGTTAACCAGGGAAACAGAAGGATGAGCC-TCTGCTTCTAGAGCCCAGGCATGGGTCATGCTTTCCACTAGAGGTGTGGACAGCACCCTCAGAGCAGCAGGGAATGGCTCTGCCTGGTCTCTCTGGCCCTGTGGCCTTTGGGAGTTCATCTTGT-TGAAGGAGCTTCTTTTCAGGAAGATGAGGCAGCACAGGGT-GGGTGAGAGCACATGGGCACAGGTCCGTGGTCCCTGGCACTGGGAG--CCCCC-ACCCATGACCTGCCCAGTGTTGTGTCTGTGCCTGTGTATGTAAGGCATGC-------TTGTG i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 14214 1690 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=45601.000000 s hg38.chrUn_GL000218v1 39737 16 + 161147 TGTGGCCGCAAACTCT s panTro4.chr2A 18569709 16 - 113622374 TGTGGCCCCGAAGTCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807346 16 + 72422247 CGTGGCCCCAAAGTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755015 16 + 122973662 TGTGGCCCCACAGTCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854641 16 - 112192347 CGTGGCCCCAAAGTCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936215 16 - 112612857 CGTGGCCCCAAAGTCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733758 16 - 107442819 CGTGGCCCCAAAGTCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108536923 16 + 108555830 CGTGGCCCCAAAGTCT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625188 16 - 159171411 TGTGGCCCCAAGGTCT i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 15904 16 + 74297 CGTGCACGCATGCATT i tarSyr2.KE931122v1 I 1690 I 13 e saiBol1.JH378105 7433690 1882 + 72162052 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=38628.000000 s hg38.chrUn_GL000218v1 39753 11 + 161147 CCCTCCCCTCT s panTro4.chr2A 18569725 11 - 113622374 CCCTCCCCTCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807362 11 + 72422247 CCCTCCCCTCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755031 11 + 122973662 CCCTCCCCTCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854657 11 - 112192347 CCCTCCCCTCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936231 11 - 112612857 CCCTCCCCTCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733774 11 - 107442819 CCCTCCCCTCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108536939 11 + 108555830 CCCTCCCCTCT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625204 11 - 159171411 CCCTCCCCTCT i calJac3.chr5 C 0 C 0 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 15920 13 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=11916.000000 s hg38.chrUn_GL000218v1 39764 3 + 161147 CAG s panTro4.chr2A 18569736 3 - 113622374 CAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807373 3 + 72422247 CAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755042 3 + 122973662 CAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854668 3 - 112192347 CAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936242 3 - 112612857 CAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733785 3 - 107442819 CAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108536950 3 + 108555830 CAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625215 3 - 159171411 CAA i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 15933 3 + 74297 CAG i tarSyr2.KE931122v1 I 13 I 454 e saiBol1.JH378105 7433690 1882 + 72162052 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=106406.000000 s hg38.chrUn_GL000218v1 39767 45 + 161147 CACCTGTGGGGGATGTGTGTGTGGAG--------ATTGGAGTGTTTATTGG-----------AG s panTro4.chr2A 18569739 46 - 113622374 CACCTGCGGGGGATGTGTGTGCGGGG-------TGTTGGAGTGTTTATTGG-----------AG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807376 47 + 72422247 CACCTGCGGGGGATGTGTGTGGGGGG------ATGTTGGAGTGTTTATTGG-----------AG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755045 56 + 122973662 CACCTGGGGGGGATGTGTTGGGGGGG--------GTTGGGGTGTTTATTGGAGGCTGAGATCAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854671 55 - 112192347 CACCTGCGGGGGATGTGTGTGGGTGG---------TTGGGGTGTTTATTGGAGGCTGAGATCAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936245 55 - 112612857 CACCTGCGGGGGATGTGTGTGGGTGG---------TTGGGGTGTTTATTGGAGGCTGAGATCAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733788 55 - 107442819 CACCTGCGGGGAATGTGTGTGGGGGG---------TTGGGGTGTTTATTAGAGGCTGAGATCAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108536953 55 + 108555830 CACGTGCGGGGGATGTGTGTGGGGGG---------TTGGGGTGTTTATTGGAGGCTGAGATCAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625218 53 - 159171411 TACCTGCAGGGGATGTGTGTGTGTGGGGGGGCGCATTGCGGTGTTCATAGG-----------AG i calJac3.chr5 C 0 I 3 e saiBol1.JH378105 7433690 1882 + 72162052 I e tarSyr2.KE931122v1 15936 454 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=13600.000000 s hg38.chrUn_GL000218v1 39812 6 + 161147 AGGGTC s panTro4.chr2A 18569785 6 - 113622374 AGAGTC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807423 6 + 72422247 AGAGTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755101 6 + 122973662 AGAGTA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854726 6 - 112192347 AGAGTA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936300 6 - 112612857 AGAGTA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733843 6 - 107442819 AGAGTA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537008 6 + 108555830 AGAGTA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625274 6 - 159171411 AAGATC i calJac3.chr5 I 3 C 0 s saiBol1.JH378105 7435572 6 + 72162052 AAGATC i saiBol1.JH378105 I 1882 N 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=244273.000000 s hg38.chrUn_GL000218v1 39818 83 + 161147 ------ACAGCGAGGAGGTGGACGGGGGCACCTGGGACTGCCTCAGAGGCCCAGGCAGTACCTGAACTGGGCTGCTTCGCGGCACAGCT s panTro4.chr2A 18569791 83 - 113622374 ------ACAGGGAGGAGGTGGACAGGGCCACCTGGGACTGCCTCAGAGGCCCAGGCAGCACCTGAACTGGGCTGCGTCACGGCACAGCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11807429 83 + 72422247 ------GCAGGGAGGAGGTGGACGGGGCCACCTGGGACTGCCTCAGAAGCCCATGCAGCACCTGAACTGGGCTGCTTCTCGGCACAGCT i ponAbe2.chrUn C 0 M 861 s nomLeu3.chr1a 40755107 83 + 122973662 ------GCAGGGAGGAGGTGGACGCGGCCACCTGGGACTGCCTCAGAGGCCCAGGCAGCACCTGAACTGGGCTGCGTCGCGGCACAGCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854732 83 - 112192347 ------GCAGGGAGGCGGTGGACCGGGCCACCTGGGACTGCCTCAGAGGCACAGGCAGCACCTGAACTGGGCTGCATCGCGGCACAGCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936306 83 - 112612857 ------GCAGGGAGGCGGTGGACCGGGCCACCTGGGACTGCCTCAGAGGCACAGGCAGCACCTGAACTGGGCTGCATCGCGGCACAGCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733849 83 - 107442819 ------GCAGGGAGGTGGTGGACCGGGCCACCTGGGACTGCCTCAGAGGCACAGGCAGCACCTGAACTGGGCTGCATCCCGGCACAGCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537014 83 + 108555830 ------GCAGGGAGGTGGTGGACCAGGCCACCTGGGACTGCCTCAGAGGCACAGGCAGCACCTGAACTGGGCTGCATCGCGGCACAGCT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625280 88 - 159171411 AGAGAGGCAGGGAGGAGGTGGA-GGGGCCACCTGGGGCTGCCCCAGAGACCCAGGCAGCACCTGAACTGGCCGGCGTCGCGGCACAGCT i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=113587.000000 s hg38.chrUn_GL000218v1 39901 46 + 161147 GCATGTTGGGCCGGTGTGAGAGCAGGTACAGCCGGGTCTGGGCTAT s panTro4.chr2A 18569874 46 - 113622374 CCATGTTGGGCCGGTGTGAGCGCAGGTACAGCCGGGTCTGGGCTAC i panTro4.chr2A C 0 C 0 s nomLeu3.chr1a 40755190 46 + 122973662 CCACGTTGGGCCGGTGCCAGCGCAGGTACAGCCGGGTCTGGGCGAC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854815 46 - 112192347 CCACGTTGGGCCGGTGTGAGCGCAGGTACAGCCGGGTCTGGGCGAC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936389 46 - 112612857 CCACGTTGGGCCGGTGTGAGCGCAGGTACAGCCGGGTCTGGGCGAC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733932 46 - 107442819 CCACGTTGGGCCGGTGTGAGCGCAGGTACAGCCGGGTCTGGGCGAC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537097 46 + 108555830 CCACGTTGGGCCGGTGCGAGCGCAGGTACAGCCGGGTCTGGGCGAC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625368 46 - 159171411 CCATGTTGGGCCGGTGCGAGCGCAGGTACAGCCGGGTCTGGGCGAC i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e ponAbe2.chrUn 11807512 861 + 72422247 M a score=357332.000000 s hg38.chrUn_GL000218v1 39947 120 + 161147 GTGCAGAGGTTCCTCCTTGTCCTT-GATGG-CCTCCTTCAGTGCCACCACGTTGTGTTCCTGATCTGTGATTTCCCGCAGCATCTGCAGACAGGACAGTGCCCCTTGGGCCTGTG-CCCCCAT s panTro4.chr2A 18569920 120 - 113622374 GTGCAGAGGTGCCTCTTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGTTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGACAGTGCTCCTTGGGCCTGTG-CCCCCAT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808380 123 + 72422247 GTGCAGAGGTGCCTCCTTGTCCCTGGATGGCCCTGCCTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCTGCAGCGTCTGCAGACAGGACAGTGCCCCTTGAGCTTGTGCCCCCCAT i ponAbe2.chrUn M 861 C 0 s nomLeu3.chr1a 40755236 120 + 122973662 GCGCAGAGGTGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGATGGTTCCCCTTGGACCTGTG-CTCCCAT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854861 119 - 112192347 GCGCAGAGGGGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGACAGTGC-CCTTGGGCCTGTG-CCCTCAT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936435 119 - 112612857 GCGCAGAGGGGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGACAGTGC-CCTTGGGCCTGTG-CCCTCAT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3733978 119 - 107442819 GCGCAGAGGGGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGACAGTGC-CCTTGGGCCTGTG-CCCTCAT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537143 119 + 108555830 GCGCAGAGGGGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGTGCCGCCACGTTGTGCTCCTGATCTGTGATTTCCCGCAGCGTCTGCAGACAGGACAGTGC-CCTTGGGCTTGTG-CCCCCAT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625414 120 - 159171411 TCGCAGAGGTGCCTCCTTGTCCTT-GATGG-CCTGCTTCAGCGCTGCCACGTTGTGTTCCTGGTCTGTGACTTCCCGCAGCGTCTGCAGACAGGACAGTGGCCCTTGGGCCTGCG-CCCCCAT i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e otoGar3.GL873563 7290944 882 + 14503122 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=4500.000000 s hg38.chrUn_GL000218v1 40067 1 + 161147 G s panTro4.chr2A 18570040 1 - 113622374 G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808503 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755356 1 + 122973662 G i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854980 1 - 112192347 G i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936554 1 - 112612857 G i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734097 1 - 107442819 G i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537262 1 + 108555830 G i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625534 1 - 159171411 G i calJac3.chr5 C 0 C 0 s otoGar3.GL873563 7291826 1 + 14503122 G i otoGar3.GL873563 I 882 N 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=312217.000000 s hg38.chrUn_GL000218v1 40068 114 + 161147 CCCGGGCATATGGAATG-TGGAGACCAGTCTGGTCCTACCCAGCTCCTGGGGCTGTGTCCAGAGGGTGGTCCTGACCAGTGGCTCTGGGGAGGCGTGGATGAGGGGAACAATGTG s panTro4.chr2A 18570041 114 - 113622374 CCCGGGTATATAGAACG-CCGAGACCAGGCTGGTCCTACCCAGGTCTTGGGGCTGTGTCCAGAGGGCAGTCCTGACCAGTGGCCCTGGGGAGGCGTGGATGAGGGGAACAATGTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808504 114 + 72422247 CCCGGGCATATGGAATG-CCGAGACCAGGCTGGTCCTACCCAGGTCCTGGGGCTGTGTCCAGAGGGCAGTCCTGACCAGTGGCCCTGGGGAGGCGTGGATGAGGGGAACAATGTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755357 113 + 122973662 CCCGGGCATATGGAACG-CCGAGACCAGGCTGGTCCTACCCAGGTCCTGGGGCTGTGTCCAGAGGGCAGTCCTGACCAGTGGCCCCCGGGAGGCGTGGATGA-AGGAACAATGTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3854981 113 - 112192347 CCCGGGCATATGGAATG-CCGATACCAGGCTGGTCCTGCCCAGGTCCTGGGGCTGTGTCCAGACGGCAGTCCTGACCAGTGGCCCCAAGGAGGCATGAATGA-AGGAACAATGTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936555 113 - 112612857 CCCGGGCATATGGAATG-CCGATACCAGGCTGGTCCTGCCCAGGTCCTGGGGCTGTGTCCAGACGGCAGTCCTGACCAGTGGCCCCAAGGAGGCATGAATGA-AGGAACAATGTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734098 113 - 107442819 CCCGGGCATATGGAATG-CCGATACCAGGCTGGTCCTGCCCAGGTCCTGGGGCTGTGTCCAGACGGCAGTCCTGACCAGTGGCCCCAGGGAGGCATGAATGA-AGGAACAATGTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537263 113 + 108555830 CCCAGGCATATGGAATA-CCGATACCAGGCTGGTCCTGCCCAGGTCCTGGGGCTGTGTCCAGAGGGCAGTCCTGACCAGTGGCCCCGGGGAGGCATGAATGA-AGGAACGATGCG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625535 113 - 159171411 CCCTGGCATATGGAACACCCCAGACCAGCCCTGTCCTACCCAGGCCCT-GGGCTGCGTCCAGGAGGCAGCCCTGTCCAGGGGCCCCGGGGAGGTGTGGCTGA-AGGGACCATGTG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=8224.000000 s hg38.chrUn_GL000218v1 40182 4 + 161147 --CACA s panTro4.chr2A 18570155 4 - 113622374 --CACG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808618 4 + 72422247 --CATG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755470 4 + 122973662 --CACG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3855094 4 - 112192347 --CACG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936668 4 - 112612857 --CACG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734211 4 - 107442819 --CACG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537376 4 + 108555830 --CACG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625648 4 - 159171411 --CACA i calJac3.chr5 C 0 C 0 s micMur1.scaffold_59246 407 4 - 8458 CCCA-- i micMur1.scaffold_59246 N 0 C 0 e tarSyr2.KE931122v1 15936 454 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=-100.000000 s hg38.chrUn_GL000218v1 40186 1 + 161147 -G s panTro4.chr2A 18570159 1 - 113622374 -G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808622 1 + 72422247 -G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755474 1 + 122973662 -G i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3855098 1 - 112192347 -G i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936672 1 - 112612857 -G i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734215 1 - 107442819 -G i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537380 1 + 108555830 -G i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625652 1 - 159171411 -G i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 16390 1 + 74297 -G i tarSyr2.KE931122v1 I 454 C 0 s micMur1.scaffold_59246 411 1 - 8458 C- i micMur1.scaffold_59246 C 0 N 0 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=2070.000000 s hg38.chrUn_GL000218v1 40187 3 + 161147 GGC s panTro4.chr2A 18570160 3 - 113622374 GGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808623 3 + 72422247 GGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755475 3 + 122973662 GGC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3855099 2 - 112192347 GG- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936673 2 - 112612857 GG- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734216 2 - 107442819 GG- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537381 3 + 108555830 GGC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625653 3 - 159171411 GGC i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 16391 3 + 74297 GGC i tarSyr2.KE931122v1 C 0 I 1493 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3330989.000000 s hg38.chrUn_GL000218v1 40190 1232 + 161147 CCCCAGCGGGCTCTGG-AGAGTCAGGCAGCCTGTTGTCTCTTAGCTCTGGTCCAAGAACCCCCATCCTTGGTGGTCACCAGGACCC-----------------AAATCCTGCTCAAGGACTGGGGACTCAGAGGTGGTAAAGGCCATGCTGAGGCCCT-AGAGTCAGAGCCCTGCCTGCCAGGCCAGGACTCTTGGGGACCTCCCAGGCAGTCAATGCTCCCCAGACCAGCTCCTGCCTCCATCCTCCCCACAGCTCCTCCTGCTCAGTCATGGGGGTTGCAACACACTGCGATCATACCCAGTGTCACCTGGTTTTACATAGGTTTACGGAGAGGTGACACTTGCTTCTGGGGTCCCTCGGGAT------AAGTGGGACAGAGGAGAAAGGTGTTGAGGGCCCAGGCCAGGTGATGAGAGGGGGCAGAGTGGTGGGCAGGCGCCGGAGCCGTCTTCGGGGTTCAGGGTGCCCCACCTTGTGCAGGTGGTGCTGCAGCTTGTGCCGCACGTCCTCCAGTTCCTCACAGCGGCGCCCGAAGGCCAGGTTCACGGCGTCACACTGGAGTCCCAGGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACAAGCACCCACAGGTTGGCCGAGTCCAGGCGCTCGCGCTGGGCGTGGCACAGATTGTCCTGTGTGAACTTGGTCCGGGTCTCTGGGGTGGAGGCGCTGCGGGGCTGGGGACAGCCAGGAGAGGGTCAGGGAGGCTCTGCCAATGGCTGGGGGCCCTGCCGCG------------------------------CCCCCATTCCCTGTCTGCACCCCATGCTCCTGGAGGAACTGCATGGACTCCAATGCACCCCGTGCAGACCCACGAAGCCCAGTCCCCCAAGCTCCCTGCCTCCGAGTGCCCCCC-GCCCACAACTCCCCTGAGTCCACCCACACCCTACCCACCCCGGGCACTTAGTCCCCTCCTGCCCCCGCGACCCCGTTCCCAGCACCGCTGCCCCCGAGGCCCCCTCTGCAGCACCTCTGTCTCCCGCAGCCCCCCTTCCCTAGTACCCAGCG-CCCG-------------------CGTCCGCTTCTCGCACCCAGGAGTTTGCCATGCTCAAGTGGGCGGTGGTCGTGCTCCCTCTGCTGGCCTTGGGTGGAAATGCAATCCTGCCGGCGCCTGGGACTGACCGCATCCC--ACCCTGTCCTGTCTACGGGCAACCAG--------GCTGTGCACGCGCTGGGCACTTGAGGAGGTCTTGCACGCTTTCTCATGCCA-GGGCAAACAGTTGCCCAAGTGCCCTCGGG s panTro4.chr2A 18570163 1209 - 113622374 CCCCAGTGGGCTCTGG-AGAGTCAGGAAGCCTGTTGTCCCTTAGCTCTGGTCCAAGAACCCCCATCCTTGGTGGTCACCAGGACCT-----------------GAATCCTGCTCAAGGACTGGGGACTCAGAGGTGGTAAAGGCCACGCTGAGACCCT-AGATTCAGAGCGCTGCCTGCCAGGCCAGGACTCTTGGGGACCTCCCGGGCGGTCAGTGCTCCCCAGACCACCTCCTGCCTCCATCCTCCCCACAGCTCCTCCTGCTGAGTCATAGGGGTGGCAACACCGGCCGATCATACCCAGTGTTACCTGGTTTTACATAGGTTTACGGAGAGGAGACACTTGCTTCTGGGGTCCCTCGGGAT------AAATGGGACAGAGGAGGAAGGTGTTGAGGGCCCAGGCCAGGTGATGAGAGGGG------------------------GCCGTCTTCGGGGTTCAGGGTGCCCCACCTTGTGCAGGTGGTGCTGCAGCTTGTACCGCGCATCCTCCAGCTCCTCACAGCGGCGCCCGAAGGCCAGGTTCACGGCGTCGCACTGGAGCCGCAGGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACCAGCACCCACAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCACGGCACAGATTGTCCTGCGTGAACTTGGCCCGGGTCTCCGGGGTGGAGGCGCTGCGGGGCGGGGGAGAGCCAGGAGAGGGTCGGGGAGGCTCTGCCGAAGGCTGGGAGCCCTGCTGCG------------------------------CCCCCATGCCCTGTCCGCGCCCCATGCTCCTGGAGGACGTGCATGGACTCCGATGCACCCCGTGCTGCCCCACAAAGCCCAGTCCCTCAGGCTCCCTGCCCCCGAGTGCCCCCT-GGCCACAACTTCCCTGAGTCCCCCCACACCCTACACACCCCGGGCACTTAGTCCCCTCGTGCCCCCGCGACCCCGTTCCCAGCACCGCTGCCCCGGAGGCCCCCTCTGCAGCACCTCCGGCCCCCGCAGCCCCCCTTCCCTAGTACCCAGCG-CCCG-------------------CGTCCTCTTTTTGCTCCCAGGAGTTTGCCGCCCTCAAGTGGGCGGTGGTCAGGCTCCCTCTGCTGGCCTTGGGCGGAAACGCAATCCTGCCGGCGCCTGGGTCTGACCCCACCCT--ACTCTGTCCTGTCTGCCGGCAGCCAG--------GCTGTGCACGTGCTGGACATTTGAGGAGGTCTTGGTCGCTTGCTCATGCCAGGGGCAGACAGTTGCCCAAGTGCCCTCGGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11808626 1222 + 72422247 CCCCAGTGGGCTCTGG-AGAGTCAGGCAGCCTGTTGTCCCTTAGCTCTGGTCCAAGAACCCCCATCCTTGGTGGTCACCAGGACCC-----------------TAATCCTGCTCAAGGACTGGGGACTCAGAGGTGGTAAAGGCCACGCTGAGACCCT-AGAGTCAGAGCCCTGCCTGCCAGGCCAGGACTCTTGGGGACCTCCCGGGCGGTCAGTGCTCCCCAGACTACCTCCTGCCTCCA-------------TCCTCCTGCTCAGTCATGGGGGTGGCAACACCCGCCGATCATACCTAGTGTCACCTGGTTTTACATAGGTTTCTGGCGAGGTGAC----GCTTCTGGGGTCCCTCGGAAT------AAGTGGGGCAGAGGAGAAAGGTGTTGAGGGCCCAGGCCAGGTGATGAGAGGGG------------------------GCCGTCTTCGGGGTTCAGGGTGCCCCACCTTGTGCAGGTGGTGCTGCAGCTTGTGCCGCGCGTCCTCCAGCTCCTCACAGCGGCGCCCGAAGGCCAGGTTCACGGCGTCGCACTGGAGCCGCAGGTCCTCGGAGGTGTCTCGAAGGATGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCTGGGGTGGAGGCGCTGCGGGGCGGGGGACAGCCAGGAGAGGGTCGGGGAGGCTCTGCCGAAGGCTgggggccctgccgcgcccccgccgcgcccccATGCCCTGTTCGCACCCCCATGCCCTGTCCGCACCCCATGCTCCTGGAGGACCTGCATGGACTCCGATGCACCCCGTGCCGCCCCACGAAGCCCAGTTCCCCAGGCTCCCTGCCCCCGAGTGCCCCCC-GCCCACAACTCCCCTGAGTCCCCCCACACCCTACCCACCCCGGGCACTTAGTTCCCTCGTGCCCCCGCGACCTCGTTCCCAACACCGCCGCCCCCGAGGCCCCCTCTGCAGCACCTCCGGCCCCCGCAGCCCCCCTTCCCTAGTACCCAGCG-CCCG-------------------CGTCCTCTTTTCGCATCCAGGAGTTTGCGGCGCTCAAGTGGGCGGTGGTCGCGCTCCCTCTGCTGGCCTTGGGCGGAAACGCAATACTGCCGGCCCATGGGTCTGACCCCACCCC--ACCCTGTCCTGTCTGCCGGCAACCAG--------GCTGTGCTTGCGCTGGGCACTTGAGGAGGTCTTGCACGCTTGCTCATGCCAGGGGCAGACAGTTGCCCAAGTGCTCTCGGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40755478 1189 + 122973662 CCCCATCAGGCTCTGG-AGAGTCAGGCAGCCTGTTGTCCCTTAGCTCTGGTCCAAGAACCCCCATCCTTGGTGGTCACCAGGACCC-----------------GAATCCTGCTCAAGGACTGGGGACTCAGAGGCGGTAAAG-------------------------------GCCTGCCAGGCCGGCACTCTTGGGGACCTCCTGGGCGGTCAATGCTCCCCAGGCCATCTCCTGCCTCCATCCTCCCCACAGCTCCTCCTGCTCAGTCATGGGGATGGCAACACCCACCGATCATACCCAGTGTCACCTGGTTTCACATAGGTTTACAGAGAGGCGACACTTGCTTCTGGGGTCCCTTGGGGT------AAATGGGGCAGAGGAGAGAGGTGTTGAGGGCCCAGGCCAGGTGATGAGAGTGG------------GCAGGCGCGGGAGCCGTCTTCGGGGTTCAGGGTG-CCCACCTTGTGCAGGTGGTGCTGCAGCTTGTGCCGCGCGTCCTCCAGCTCCTCGCAGCGGCGCCCAAAGGCCAGGTTCACGGCGTCGCATTGCAGCAGCAGGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACCAGCACCCGCAAGTCGGCGGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCCGGGGTGGAGGCGCTGTGGGGCGGGGTACAGCCAGGGGAGGGTCGGAGATGCTCTGCCAAAGGCTGGGGGCCCTGCCGCG------------------------------CCCCCATGCCCCGTCCACGCCCCGTGCTCCTGGAGGACCTGCATGGACCCTGATGCACCCCATGCCGCCCCACGAAGCCCAGTCCCCCAGGCTCCCTGCCCCCGAGTGTCCCCC-GCCCACAACTCCCCTGAGACCCCCCACACCCTACCCACCCCGAGCGCTTAGTCCCCTCGTGCCCCCGAGACCCCGTTCCCAGCACCGTCGCCCCCGAGGCCCCCTCTGCAGGACCTCCAGGCCCCGTAGCCCCCCTTCTCTAGTACCCAGCG-CCCG--------------------GTCCCCTTCTCGCACCCAGGAGTTTGCCGCGCTCAAGTGGGCGGTGGTCACGCTCTCTCTGCTAGCCTCGGGCGGAAACGCAGTCCTGCCGGCGCCTGGGGCTGACCCCACCCC--ACCCTGTCCTGTCTCCCCGCGACCAG--------GCTGTGCAGGACCTGGGCACTTGAGGGGGTCTTGCTCGCTTGCTCATGCCAGGGGCAGACAGTTGCCCAAGTGCCCTCGGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3855101 1227 - 112192347 CCCCAGCGGGCTCTGGAAGAGTCAGGCAGCCTGTTGCCCCTTAGCTCTGGTCCAAGAACTACCATCTTTGGTGGTCACCAGGACCC-----------------GAACCCTGCTCAAGGACTGGGCACTCAGAGGCGGTAAAGGCCACGCTGAGACCCT-AGA-TCAGAGCCCTGCCTGCCAGGCCAGGACTCTCGGGGACC-CCTGGGAGGTCAGTGCTCCCCAGACCACCTGCTGCCTCCATCCTCCCCACAGCTCCTCCTGTTTAGTCATGGGGGTGGCAACACCCGTCCATCATACCCAGCTTCGCCTGGTTTTACACAGGTTTACGGAGAGGTGGCACTTGCTTCTGGGGTCCCTCGGGGT------AAGTGGGGCAGAGGAGAGCGGTGCTGAAGGCCCAGGCCAGGTGATGCGGGGGG-CAGAGTGGTGGGCAGGCGCGGGAGCCGTCTTGGGGGTTCAGGGCGCCCCACCTTGTGCAGGTGCTGCTGCAGCTTGTGCCGCGCGTCCTCCAGCTCCTCGCAGCGGCGCCCGAAGGCCAGGTTCACAGCGTCGCACTGCAGCCGCAGGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCCGGGGTGGAGGCGCTGCGGGTTGGGGGACAGCCAGGGGATGG-CGGGGAGGCTCTGCCAAAGGCCGGGGGTCCTGCCGCG------------------------------CCCCCATGCCTTGTCCGCGCCCCGTGCTCCTGGAGGACCCGCATGGACTCCGATGCAGCCCGTGCCGCCCCACGAAGCCCAGTCCCCCAGGCTCCCTGTCCCCGAGTGCCCCCCGGACCACAACTCCC--GAGTCCCCCCACACCCTACCCACTTCGGGCGCTTAGTCCCCTCGCGTCCCCGCGATCCCGCTCACAGCACCGCCGCCCCCGAGGCCGCCTCTGCAGCACCTCCGGCCCCCGAAGCCCCCCTTCCCTAGTACCCGGCG-CCCG-------------------GGTCCCCTCCCTGCGCCCGGGAGTTTGCTGCGCTCAAGTGGGCGGTGTTCGCGCGCCCTCTGCTGGCCGTGGACGGAAACGCAGTCCTGCCGGCGCCTGGGGCTGACC-CACCCC--ACCCTGTCGGGTCTCCCCGCGACCTG--------GCTGTGCACGCGCTGGGCACTTGAGGGGGTCTTGCTCGCTTGCTCATGCCC-GGGTAGAAAGTTTCCCAAGTACCCTCGGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3936675 1229 - 112612857 CCCCAGCGGGCTCTGGAAGAGTCAGGCAGCCTGTTGCCCCTTAGCTCTGGTCCAAGAACTACCATCTTTGGTGGTCACCAGGACCC-----------------GAACCCTGCTCAAGGACTGGGCACTCAGAGGCGGTAAAGGCCACGCTGAGACCCT-AGA-TCAGAGCCCTGCCTGCCAGGCCAGGACTCTCGGGGACC-CCTGGGAGGTCAGTGCTCCCCAGACCACCTGCTGCCTCCATCCTCCCCACAGCTCCTCCTGTTTAGTCATGGGGGTGGCAACACCCGTCCATCATACCCAGCTTCGCCTGGTTTTACACAGGTTTACGGAGAGGTGGCACTTGCTTCTGGGGTCCCTCGGGGT------AAGTGGGGCAGAGGAGAGCGGTGCTGAAGGCCCAGGCCAGGTGATGCGGGGGG-CAGAGTGGTGGGCAGGCGCGGGAGCCGTCTTGGGGGTTCAGGGCGCCCCACCTTGTGCAGGTGCTGCTGCAGCTTGTGCCGCGCATCCTCCAGCTCCTCGCAGCGGCGCCCGAAGGCCAGGTTCACAGCGTCGCACTGCAGCCGCAGGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCCGGGGTGGAGGCGCTGCGGGTTGGGGGACAGCCAGGGGATGG-CGGGGAGGCTCTGCCAAAGGCCGGGGGTCCTGCCGCG------------------------------CCCCCATGCCTTGTCCGCGCCCCGTGCTCCTGGAGGACCCGCATGGACTCCGATGCAGCCCGTGCCGCCCCACGAAGCCCAGTCCCCCAGGCTCCCTGTCCCCGAGTGCCCCCCGGCCCACAACTCCCCTGAGTCCCCCCACACCCTACCCACTTCGGGCGCTTAGTCCCCTCGCGTCCCCGCGATCCCGTTCCCAGCACCGCCGCCCCCGAGGCCGCCTCTGCAGCACCTCCGGCCCCCGAAGCCCCCCTTCCCTAGTACCCGGCG-CCCG-------------------GGTCCCCTCCCTGCGCCCGCGAGTTTGCTGCGCTCAAGTGGGCGGTGGTCGCGCGCCCTCTGCTGGCCGTGGACGGAAACGCAGTCCTGCCGGCGCCTGGGGCTGACC-CACCCC--ACCCTGTCCGGTCTCCCCGCGACCTG--------GCTGTGCACGCGCTGGGCACATGAGGGGGTCTTGCTCGCTTGCTCATGCCC-GGGTAGAAAGTTTCCCAAGTACCCTCGGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3734218 1246 - 107442819 CCCCGGCGGGCTCTGGAACAGTCAGGCAGCCTGTTGCCCCTTAGCTCTGGTCCAAGAACTACCATCCTTGGTGGTCACCAGGACCC-----------------GAACCCTGCTCAAGGACTGGGCACTCAGAGGCGGTAAAGGCCACGCTGAGACCCT-AGA-TCAGAGCCCTGCCTGCCAGGCCAGGACTCTCGGGGACC-CCTGGGAGGTCAGTGCTCCCCAGACCACCTGCTGCCTCCATCCTCCCCACAGCTCCTCCTGTTTAGTCATGGGGGTGGCAACACCCGCCCATCATACCCAGCGTCGCCTGGTTTTACACAGGTTTACGGAGAGGTGGCACTTGCCTCTGGGGTCCCTCGGGGT------AAGTGGGGCAGAGGAGAGCGGTGCTGAAGGCCCAGGCCAGGTGATGC-ggggg-cacagtggtgggcaggCGCGGGAGCCGTCTTGGGGGTTCAGGGCGCCCCACCTTGTGCAGGTGCTGCTGCAGCTTGTGCCGCGCGTCCTCCAGCTCCTCGCAGCGGCGCCCGAAGGCCAGGTTCACAGCGTCGCACTGCAGCCGCAGGTCCTCGGAGGTGTCGCGGAGGATGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCCGGGGTGGAGGCGCTGCGGGTTGGGGGACAGCCAGGGGATGG-CGGGGAGGCTCTGCCAAAGGCCGGGGGTCCTGCCGCG------------------------------CCCCCATGCCTTGTCTGCGCCCCGTGCTCCTGGAGGACCCGCATGGACTCCGATGCAgcccgtgccgccccacgaagcccagtcccccaggctccccgtccccgagtgccccccggcccacaactcccctgagtgcccccacaccctacccacTTCGGGCGCTTAGTCCCCTCGCGTCCCCGCGATCCCGTTCCCAGCACCGCCGCCCCCGAGGCCGCCTCTGCAGCACCTCCGGgccccgtag-cccccttccctggtacccggcg-cccgggtcccctccctgcgcccaggtcccctccctgcgcccGGGGGTTTGCTGCGCTCAAGTGGGCGGTGGTCGCGCGCCCTCTGCTGGCCGTGGACGGAAACGCAGTCCTGCCGGCGCCTGGGGCTGACC-CACCCC--ACCCTGTCCTGTCTCCCCGCGACCTG--------GCTGTGCACGCGCTGGGCACTTGAGGGGGTCTTGCTCGCTTGCTCATGCCG-GGGTAGAAAGTTTCCCAAGTGCCCTCGGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108537384 1227 + 108555830 CCCCAGCGGGCTCTGGAAGAGTCAGGCAGCCTGTTGCCCCTTAGCTCTGGTCCAAGAACTACCATCCTTGGTGGTCACCAGGACCC-----------------GAACCCTGCTCAAGGACTGGGCACTCAGAGACGGTAAAGGCCACGCTGAGACCCT-AGA-TCAGAGCCCTGCCTGCCAGGCCAGGACTCTCGGGGACC-CCTGGGAGGTCAGTGCTCCCCAGACCACCTGCGGCCTGCATCCTCCCCACAGCTCCTCCTGTTCAGTCATGGGGGTGGCAACACCCGCCCATCATACCCAGTGTCGCCTGGTTTTACACAGGTTTACGGAGAGGTGGCACTTGCTTCTGGGGTCCCTCGGGGT------AAGTGGGGCAGAGGAGAGCGGTGCTGAAGGCCCAGGCCAGGTGATGC-GGGGG-CAGAGGGGTGGGCAGGCGCGGGAGCCGTCTTGGGGGTTCAGGGCACCCCACCTTGTGCAGGTGCTGCTGCAGCTTGTGCCGCGCGTCCTCCAGCTCCTCGCAGCGGCGCCCGAAGACCAGGTTCACAGCGTCGCACTGCAGCCGCAGGTCCTCGGAGGTGTCGCGAAGGACGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCATAGATTGTCCTGCGTGAACTTGGCCCAGGTCTCCGGGGTGGAGGCGCTGCGGGGCGGGGGACAGCCAGGGGAT----GGGGGGGCTCTGCCAAAGGCCGGGGGTCCTGCCGCG------------------------------CCCCCATGCCCTGTCCGCGCCCCGTGCTCCAGGAGGACCCGCATGGACTCCGATGCAGCCCGTGCCGCCCCACGAAGCCCAGTCCCCCGGGCTCCCTGTCCCCGAGTGCCCCCCGGCCCACAACTCCCCTGAGTCCCCCCACACCCTATCCACCTCGGGCACTTAGTCCCCTCGCGTCCCCGCGATCCCGTTCCCAGCACCGCCGCCCCCAAGGCCGCCTCTGCAGCACCTccggcgcccgtagccccccgtccctagtaccgggcg-cccg-------------------ggtcccctccctgcgcccggGAGTTTGCTGCGCTCAAGTGGGCGGTGGTCGCGCGCCCTCTGCTGGCCGTGGACGGAAACGCAGTCCTGCCGGCGCCTGGGGCTGACC-CGACCCTAACCCCGTCCTGTCTCCCCGCGACCTG--------GCTGTGCACGCGCTGGGCACTTGAGGGGGTCTTGCTCGCTTGCTCATGCTG-GGGTAGAAAGTTTCTCAAGTGTCCTCGGG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21625656 1265 - 159171411 CCCCAGAGGGCTCTTG-AGAGTCAGGCACCCTGTTGTTCCTTAGCTCTGGTCCAAGAACTCCCATCCCTGGTGGTCACCAGGACCCGGGCTGGGGAGGGCAGAGAACCCTGCTCAAGGACTCGGAACTTACAGGTAGGAAAGGTCACACTGATACCCTAAGAGTCAGAGCCCTGCCTGCCAGGCCAGGACTCTTGGGGACCCCCTGGGCGGTGAGTGCTCCTCAGACCTCCTACTGCCCCCATCCTCCCCACAGCTCCTCCTGCCCAGTCATGGAGGTTGCAAC------CCGCCACTCCCAATGTCATCTGGTTTTATGCAGATTGGAGGAGGACTGGCATCTGCTTCTGGGGTCCCTCAGGGTTGCGGGGGGGGGGGCAGAGAAGGGAGGTGTTGAGGGCCCAGGCCAGGTGACGA-AGGGG-CAGAGTGGTGGGCGAGCTCGGGAGCCGTCTTAGGGGTTCAGGGCGCCCCACCTCGTGCAGGTGGTGCTGCAGCTTGTGCCTTGCGTCCTCCAGCTCCTCGCAGCGGCGCCCAAAGGCCAGATTCACGGCGTCACACTGCAGCCGCAAGTCCTCGGAGGTGTCGCGAAGGATGCAGTCCACCAGCACCCGCAGGTTGGCCGAGGCCAGGCGCTCGCGCTGGGCGCGGCACAGATTGTCCTGAGTGAACTTGGCCCAGGTCTCAGGCGTGGACGCGCTGCAGGC--GGGGGCAGCCAGGGGAGGGGCAGGGAGGCGTTG-TAAAGGCTGGGGGCCCTGCCCCA-CCCCCCAGCGTCCCTCG------------CCTCCGTGCCCTGCCGGCGCCCCGAGCTCCTGGAGGGACCGCTCGGACTCCAGTGCACCCCGCACCACCCCACGAAGCCCAGCCCTTCAGGCTTCCTGCTTCCAAGTGCCCCCCCGCCCACAACTCGCCTGCGTCCCCCCTCCCCATACCCACACCAGGCGCCTAGTCCCCTCGTGCCCCGGGGTCCCCGTCCCCAGCACCGCCTCCTCCGAGGCCCCCTCTTCAGCAC--------CCCGTAATCTCCCTTCTCTCCTACCCAGAACCCCG-------------------TGTCCCCTTCCCGCACCCGGGAGTTTGCTGCCATCCAGT-GGCGGTGTTCGCACGCCCTCTGCCGGCCGTGAGCGGGAATACAGTCCTGACAGCGCCGGGGGCTGACCCCGCCCCC-ACCCTGTCCGGTCTCCGGGGGACTGGGCTCCATAGCTGTGCGCCCGCTGGGCACTTGAGGGGGTCTTGCTCACCTGCTCATCCCCGGGACAGACAGTTGCCCTAATGCCCTCGGG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 16394 1493 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=108427.000000 s hg38.chrUn_GL000218v1 41422 38 + 161147 GGCGAGGGCCTCTGGGCCAGGCTGGGGGAAGCAGCGCC s panTro4.chr2A 18571372 38 - 113622374 GGCGAGGGCCTCCGGGCCAGGCTGGTGAAAGCAGCGCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11809848 38 + 72422247 GGCGAGGGCCTTCGGACCAGGCTGGTGGAAGCAGCGCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40756667 38 + 122973662 GGCGAGGGCCTCCGGGCCAGGCTGGGGGAAGCAGTGCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856328 38 - 112192347 GGCGAGGGCCTCTGGGCCAGGCTGGGGGAAGCAGCCCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3937904 38 - 112612857 GGCGAGGGCCTCTGGGCCAGGCTGGGGGAAGCAGCCCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3735464 38 - 107442819 GGCGAGGGCctctgggccaggctgggggAAGCGGCCCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108538611 38 + 108555830 GGCGAGGGCCTCTGGGCCAGGCTGGGGGAAGCAGCCCC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21626921 34 - 159171411 GTTAAGGGCCTCCGGGCCGGGCTGGGGGAAGCAG---- i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 17887 26 + 74297 ggctagggcgtgtggg---ggctgggcgc--------- i tarSyr2.KE931122v1 I 1493 I 12 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=40858.000000 s hg38.chrUn_GL000218v1 41460 15 + 161147 GCTGGGGCCCCCAGG s panTro4.chr2A 18571410 15 - 113622374 GCTGGGGCCCCCAGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11809886 15 + 72422247 GCTGGGGCCCCCAGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40756705 15 + 122973662 GCTGGGGCTCCCagg i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856366 15 - 112192347 GCTGAGGCCCCCAGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3937942 15 - 112612857 GCTGAGGCCCCCAGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3735502 15 - 107442819 GCTGAGGCCCCCAGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108538649 15 + 108555830 GCTGAGGCCCCCAGG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21626955 7 - 159171411 --------CCCCAAG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 17913 12 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=1302.000000 s hg38.chrUn_GL000218v1 41475 1 + 161147 C s panTro4.chr2A 18571425 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11809901 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40756720 1 + 122973662 c i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856381 1 - 112192347 T i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3937957 1 - 112612857 T i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3735517 1 - 107442819 T i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108538664 1 + 108555830 T i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21626962 1 - 159171411 C i calJac3.chr5 C 0 C 0 s tarSyr2.KE931122v1 17925 1 + 74297 c i tarSyr2.KE931122v1 I 12 I 587 e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=502078.000000 s hg38.chrUn_GL000218v1 41476 175 + 161147 AGA-GGGAGGCGAGACCACAGCCAGGGCAAGCACGGGGACAGAGCTGGGGCCCCCATCTCTTGGAAGGTGGTGGAGTG--CCGGATGAGCCTGCACCTCGGTGCTCTGGCTGTGGTGGCGCCC-----GCAAGTCTCGTCGAGGTTGTAGGCCTCCACCTTGTCCGACCAGTCCATCTCGCAG s panTro4.chr2A 18571426 174 - 113622374 AGA-GGGAGGCGAGACCACAGCCAGGGCAAGTGCAGGGGCAGAGCTGGGGCCCACCTCTCTTGGAAGGTGGTGGAGTA---TGGATGAGCCTGCACCTCGGTGCTCTGGCTGTGGTGGCGCCC-----GCAGGTCTCGTCGATGTTGTAGGCCTCCATCTTGTCCGACCAGTCCATCTCGCAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11809902 178 + 72422247 AGA-GGGAGGCGAGACCACAGCCAGGGCAAGCGCAGGGGCAGAGCTGGGGCCCACCTCTCTTGGAAGGTGGTGGAGTGTTTTTTGTAATCGTGCACCTCGGTGCTCTGGCTGTGGTGGCGCCCTTTTTGTAA---TGGTCGATGTTGTAGGCCTCCACC-TGTCCGACCAGTCCATCTCGCAG i ponAbe2.chrUn C 0 M 147 s nomLeu3.chr1a 40756721 174 + 122973662 aga-gggaggcgagaccacagccagggcaagcgcaggggcagagCTGGGGCCCACCTCTCTTGGAAGGTGGTGGAGTG---CGGATGATCCTGCACCTCGGTGCTCTGGCTGTGGTGGCGCCC-----GCAGGTCTTGTCGATGTTGTAGGCCTCCAACTTGTCCGACCAGTCCATCTCGCAT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856382 174 - 112192347 GGA-GGGAGGCAAGTCCACAGCCAGGGCAAGCGCGGGGTCAGAGCTGGGGCCCACCTCTCTTGGAAGGCGGTGGAGTG---AGGATGAGCCTGCACCTGGGTGCTCTGGCTGTGGTAGCGCCC-----GCAGGTCTCATCGATGTTGTAGGCCTCCACCTTGTCTGACCAGTCCATCTCGCAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3937958 174 - 112612857 GGA-GGGAGGCAAGTCCACAGCCAGGGCAAGCGCGGGGTCAGAGCTGGGGCCCACCTCTCTTGGAAGGCGGTGGAGTG---AGGATGAGCCTGCACCTGGGTGCTCTGGCTGTGGTAGCGCCC-----GCAGGTCTCATCGATGTTGTAGGCCTCCACCTTGTCTGACCAGTCCATCTCGCAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3735518 174 - 107442819 GGA-GGGAGGCAAGTCCACAGCGAGGGCAAGCGCGGGGTCAGAGCTGGGGCCCACCTCTCTTGGAAGGCGGTGGAGTG---AGGATGAGCCTGCACCTGGGTGCTCTGGCTGTGGTAGCGCCC-----GCAGGTCTCATCGATGTTGTAGGCCTCCACCTTGTCCGACCAGTCCATCTCGCAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108538665 174 + 108555830 GGA-GGGAGGCAAGTCCACAGCCAGGGCAAGCGCGGGGGCAGAGCTGGGGCCCACCTCTCTTGGAAGGCGGTGGAGTG---AGGATGAGCCTGCACCTGGGTGCTCTGGCTGTGGTAGCGCCC-----GCAGGTCTCATCGATGTTGTAGGCCTCCACCTTGTCCGACCAGTCCATCTCGCAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21626963 175 - 159171411 GAAGGGGAGGAGCGACCACAGCCAGGGCAAGCGCAGGGGTAGGGCTGGGGCCCACCTCTCCTGGAACGAGGTGGAGTG---CGGATGAGACTGCACCTCGGTGCTCTGGCTGTGGAAGCGCCC-----GCAGGTCTCGTCGATGTTGTAGGCCTCCACCTTGTCTGACCAGTCCATCTCGCAG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 17926 587 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=714495.000000 s hg38.chrUn_GL000218v1 41651 330 + 161147 ATCTCTGTGTGCTCTCGGTTCATTCTGGGGCGGGGTGGGGCAGGGCCTTGGTGTGTGGCCAGGGAGGGCCCCACTGGGGACCCTCCATGCTGCAGGCTAGGCCTTCATGCCCGCTTCAGGAGGGA-GCTCTGGG-----------CCGGCTGTCCTTGTGCTCAGCAGTGACGAAGAGCTGCCGCCCATGCTGGGAGGCTGCAGATCAGTTGTGGCACTGGG--CTTTGGCCATTC--AAACTCAGGCTGGGCTGGAACCTCCCCCACCCAGCCCTGTGCTTCCACTGTGACCTGGGACAGCCCCTGCCGGCTCTGAGCTTCAGGGTTCTGTCGTTCAATGCCTTG s panTro4.chr2A 18571600 340 - 113622374 GTCTCCTTGTGCTCCCGGTTCAGTCTGGGGCGGGGTGGGGCAGGGCCTTGATGTGTGCCCAGGGAGGGCCCTGCTGGGGACCCTCTGTGCTGCAGGCTGGGCCCCAATGCCTGCCTCGGGAGGGA-GTTCTGGGTGGGCCTGTCCCGGGCAGCCCTCGTGCTCAGCAGTGACCAGGAGCTGCGGTCCAGCCTGGGAGGCTGCAGATCAGATGTGGCACTGGG--CTCTGGCCACTC--AACCTCAGGCTGCGCCGGAACCTCCCCCACCCAGCCCTGCGC-TCCACTGTGACCTGGGGCAGCCCCTGCTGGCTCTGAGTCTCAGGGTCCTGTCGTTCAGTGCCTTG i panTro4.chr2A C 0 C 0 s nomLeu3.chr1a 40756895 329 + 122973662 GTCTCCTTGTGCTCCCGGTTCAGTCTGAGGCGGGGTTGGGTAGGGCCTTGGTGTGTGCCCAGGGAGGACC---------ATTCCCC---CTGCAGGCTGGGCCTTCATGCCCGCTTCAGGAGGGA-GCTCTGGGCCAGCCTGTCCCAGGCGGCCCTCGTGCTCAGCAGTGACCAGGTGTGGTGGCCCAGGCTGGAAGGCTGCAGATCAGATGTGGGACTGGG--CTCTGGCCACTC--AACCTCAGGCTGGGCTGGAACCTCCCCCACCCAGCCCTGCACTCCCACTGTGACCTGGGGCAGCCCCTGCCGGCTCTGAGCCTCAGGGTCCTGTCGTTCAATGCCTTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856556 337 - 112192347 GTCTCCTTGCGCTCCCGGTTCAGTCTGGGGCGAGGTGGGGCAAGGCCTTGGTATGTGCCCAGGGAGGGCCCTGCTGGGGACTGTCCCTGCTGCAGGCTGGGCCCCAGTGCCCGCTTCAGGAGGGA-ACTCTGGGCCAGCCCCTCCTGGGCAGCCCTCATGCTCAGCAGTGACCAGGAGCAGCCGCCCAGACTGGGAGGCTGCAGAGCAGACGTGGGACTGGG--CTCTGGCCACTC--AACCTCAGGCTGGGCCGGAACCTCCCCCACCCAGCCCTGCGCTCCCACTGTGACCTGGGGCAGCCCCTGCC----CTGGGCCTCAGGGTCCTGTCGTTCAATGCCTTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938132 337 - 112612857 GTCTCCTTGCGCTCCCGGTTCAGTCTGGGGCGAGGTGGGGCAAGGCCTTGGTATGTGCCCAGGGAGGGCCCTGCTGGGGACTGTCCCTGCTGCAGGCTGGGCCCCAGTGCCCGCTTCAGGAGGGA-ACTCTGGGCCAGCCCCTCCTGGGCAGCCCTCATGCTCAGCAGTGACCAGGAGCAGCCGCCCAGACTGGGAGGCTGCAGAGCAGACGTGGGACTGGG--CTCTGGCCACTC--AACCTCAGGCTGGGCCGGAACCTCCCCCACCCAGCCCTGCGCTCCCACTGTGACCTGGGGCAGCCCCTGCC----CTGGGCCTCAGGGTCCTGTCGTTCAATGCCTTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3735692 337 - 107442819 GTCTCCTTGCGCTCCCGGTTCAGTCTGGGGCGAGGTGGGGCAAGGCCTTGGTATGTGCCCAGGGAGGGCCCTGCTGGGGACTGTCCCTGCTGCAGGCTGGGCCCCAGTGCCCGCTTCAGGAGGGA-ACTCTGGGCCAGCCTGTCCTGGGCGGCCCTCATGCTCAGCAGTGACCAGGAGCAGCCGCCCAGACTGGGAGGCTGCAGAGCAGACGTGGGACTGGG--CTCTGGCCACTC--AACCTCAGGCTGGGCCGGAACCTCCCCCACCCAGCCCTGCGCTCCCACTGTGACCTGGGgcagcccctgcc----ctgggcctcAGGGTCCTGTCGTTCAATGCCTTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108538839 337 + 108555830 GTCTCCTTGCGCTCCCGGTTCAGTCTGGGGCGAGGTGGGGCAAGGCCTTGGTATGTGCCCAGGGAGGGCCCTGCTGGGGACTGTCCCTGCTGCAGGCTGGGCCCCAGTGCCCGCTTCAGGAGGGA-ACTCTGGGCCAGCCTGTCCTGGGCGGCCCTCATGCTCAGCAGTGACCAGGAGCAGCCGCCCAGACTGGGAGGCTGCAGAGCAGATGTGGGACTGGG--CTCTGGCCACTC--AACCTCAGGCTGAGCCGGAACCTCCCCCACCCAGCCCTGCGCTCCCACTGTGAGCTGGGGCAGCCCCTGCC----CTGGGCCTCAGGGTCCTGTCATTCAATGCCTTG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21627138 343 - 159171411 GTCTCCTTGTGCTCCCGGTTCAGCCTGGGGCAGCGCAGGGCAGGGCCTGGGTGTGTGCCCAAGGAGGGCCCTGCTGGGGACCCTCCCCGCAGCAGGCTGGGCCCCAATGCCAGCTTCAAGAGGGAGGCTCCGAGCCGGCCTGTCCCGGGCGGCCCTCCTGCTCAGCAGTGACCAGGAGCGGCTGCCCAGGCTCGGAGGCTGCGGATCAGACGTGCGGCTGGGCTCTCTGGCCACTCAGAACCCCAGGCTG-GCCAAAACCT-CCCCACCCAACCCTGCGCTTCCACTGTGACCTGGGACAGCCCCTTCGGGCTCTGAGCCTCAGGATCCTGT-GTTCTATGCCCTG i calJac3.chr5 C 0 C 0 e tarSyr2.KE931122v1 17926 587 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I e ponAbe2.chrUn 11810080 147 + 72422247 M a score=391031.000000 s hg38.chrUn_GL000218v1 41981 137 + 161147 CCCCAGGACCAGCCGTGGGTGGGGTCAGGAGTCATCCCTTGGGCAGCCCTCGACCCA-AGGGTCTGGCTCACTGCTTGCACGATGGCTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGGGCTCAGCTTCCTGAGGGAG s panTro4.chr2A 18571940 138 - 113622374 CCCCAGGACCAGCCGTGGGTGGGGTCAGGAATCATCCCTTGGGCAGCCCTCTACCCACCGGATCTGGCTCACTGCTTGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTGAGGGAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810228 135 + 72422247 CCCCAGGACCAACCGT-GGTGGGTTCAGGAG-CATCCCTTGGGCAGCCCTTTACCCACCGGATCGGG-TCACTGCATGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCATGAGGGAG i ponAbe2.chrUn M 147 C 0 s nomLeu3.chr1a 40757224 138 + 122973662 CCCCACGACCAGCCATGGGTGGGGTCAGGAGTCATCCCTCGGGCAGCCCTCGACCCACCGGATCTGGCTCACTGCTTGCATGATGGTTC-TCTTCAGCAGTTCCTGAATGTTCCGGATGAGTTCGGCTTCCTGAGGGAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3856893 138 - 112192347 CCCCAGGACCAGCCGTGGGTGGGGTCAGGAGTCATCCCTTGGGCAGCCCTCGACCCACCGGATCTGGCTCACAGCTTGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTGAGGAAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938469 138 - 112612857 CCCCAGGACCAGCCGTGGGTGGGGTCAGGAGTCATCCCTTGGGCAGCCCTCGACCCACCGGATCTGGCTCACAGCTTGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTGAGGAAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736029 138 - 107442819 CCCCAGGACCAGCCGTGGGTGGGGTCAGGAGTCATCCCTTGGGCAGCCCTCGACCCACCGGATCTGGCTCACAGCTTGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTGAGGAAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539176 138 + 108555830 CCCCAGGACCAGCCGTGGTTGGGGTCAGGAGTCATCCCTTGGGCAGCCCTCGACCAACCGGATCTGGCTCACTGCTTGCATGATGGTTC-TCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCGGCTTCCTGAGGAAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21627481 128 - 159171411 TTCCAGGACCACCTGTGAGTGGGGTCAGGAG---TCCTTCGGG-------GGACCCACCGGATCTGGCTCACAGCTTGCATGATGGTTCATCTTCAGCAGCTCCTGAATGTTCCGGATGAGCTCCGC-TCCTGCGGGAG i calJac3.chr5 C 0 M 765 e tarSyr2.KE931122v1 17926 587 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=36949.000000 s hg38.chrUn_GL000218v1 42118 15 + 161147 GAGACGCCCTGAGCA s panTro4.chr2A 18572078 15 - 113622374 GAGACGCCCTGAGCA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810363 15 + 72422247 GAGAAGCCCTGAGCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757362 15 + 122973662 GAGATGCCCTGAGCA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857031 15 - 112192347 GAGACGCCCTGAGCA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938607 15 - 112612857 GAGACGCCCTGAGCA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736167 15 - 107442819 GAGACGCCCTGAGCA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539314 15 + 108555830 GAGACGACCTGAGCA i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e tarSyr2.KE931122v1 17926 587 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=43469.000000 s hg38.chrUn_GL000218v1 42133 17 + 161147 CCAGATCCGGTCCTTGG s panTro4.chr2A 18572093 17 - 113622374 CCAGAGGCAGTCCCTGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810378 17 + 72422247 CCAGAGCCGGTCCCTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757377 17 + 122973662 CCAGGGCCTGTCCCTGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857046 17 - 112192347 CCAGAGCCAGTCCCTGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938622 17 - 112612857 CCAGAGCCAGTCCCTGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736182 17 - 107442819 CCAGAGCCAGTCCCTGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539329 17 + 108555830 CCAGAGCCAGTCCCTGG i chlSab2.chr12 C 0 C 0 s tarSyr2.KE931122v1 18513 17 + 74297 CCAGCTCCCTCCCTTGG i tarSyr2.KE931122v1 I 587 I 622 e calJac3.chr5 21627609 765 - 159171411 M e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=160403.000000 s hg38.chrUn_GL000218v1 42150 73 + 161147 TGAGGATCCCAGGAGGCCCAGCTGCTGAAGGCCTTGGTCAACACCTGAGCAACCAGAAATAGTTGAATGCCGG- s panTro4.chr2A 18572110 73 - 113622374 TGAGGATCCCAGGAGGCCCAGCTGCTGCAGGCCTTGGTCAACACCTGAGCAACCACAAGGAGTTGAATGCCGG- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810395 73 + 72422247 TCAGGATCCCAGGAGGCCCAGCTGCTGCAGGCCTTGGTCAACACCTGAGCAACCACAAGGAGTAGAATGCCGG- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757394 73 + 122973662 TGAGGATCCCAACAGGCCCAGCTGCCGCAGGCCTTGGTCAACACCTGAGCAACCAGAAGGAGCTGAATGCTGG- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857063 74 - 112192347 TGAGGATCCCAGCAGGCCCAGCTGCTGCCGGCCTTGGTCAACACCTGAGCCACCCGAAGGAGCTGAGTGCCGGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938639 74 - 112612857 TGAGGATCCCAGCAGGCCCAGCTGCTGCCGGCCTTGGTCAACACCTGAGCCACCCGAAGGAGCTGAGTGCCGGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736199 74 - 107442819 TGAGGATCCCAGCAGGCCCAGCTGCTGCTGGCCTTGGTCAACACCTGAGCCACCCGAAGGAGCTGAGTGCCAGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539346 74 + 108555830 TGAGGATCCCAGCAGGCCCAGCTGCTGCTGGCCTTGGTCAACACCTGAGCCACCAGAAGGAGCTGAGTGCCGGG i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e tarSyr2.KE931122v1 18530 622 + 74297 I e rhiRox1.KN296812v1 321302 1721 - 788236 I a score=3600.000000 s hg38.chrUn_GL000218v1 42223 1 + 161147 G s panTro4.chr2A 18572183 1 - 113622374 G i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810468 1 + 72422247 G i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757467 1 + 122973662 G i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857137 1 - 112192347 G i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938713 1 - 112612857 G i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736273 1 - 107442819 G i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539420 1 + 108555830 G i chlSab2.chr12 C 0 C 0 s rhiRox1.KN296879v1 1553951 1 - 1560628 G i rhiRox1.KN296879v1 I 15271 I 5721 e calJac3.chr5 21627609 765 - 159171411 M e tarSyr2.KE931122v1 18530 622 + 74297 I a score=439927.000000 s hg38.chrUn_GL000218v1 42224 177 + 161147 CCTGAGCTCTGACTGTGCAAGTTCTGCTCTCTCACTGGGTTTATCCTGGGCTTTTGGGCATTCTCCTTGGTGCGTTGTAAGTGGGTTGTTTTCCTCCAGGGCCTTCTATGGGCTGCTGGGAAGGTCCCTCAGTGGCAGTTCCCACGCCCCAGGCCTCAAGAGTCATCACTGCTGCTC s panTro4.chr2A 18572184 177 - 113622374 CCTGAGCTCTGACTGTGTAAGTTCTGCTCTCTCACTGGGTTTATCTTGGGCTTTTGGGCATTCTCCTTGGTGCGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCTGTGGGCTGCTGGGAAGGTCCCTTAGCGGCAGTTCCCACCCCCCAGGCTTCAGGAGTCATCGCTGCTGCTC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810469 177 + 72422247 CCTGAGCTCTGACTGTGCAAGTTCTGCTCTCTCACTGGGTTTATCTTGGGCTTTTGGGCATTCTTCTTGGTGCGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCTATGGGCTGCTGGGAAGGTCCCTCAGCAGCAGTTCCCACGCCCCAGGCTTCAGGAGTCATCACTGCTGCTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757468 177 + 122973662 CCTGAGCTCTGACTATGGAAGCTCTGCTCTCTCACTGGGTTTATCTTGGCCTTTTGGGCATTCTCCTTGGTGGGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCTATGGGCTGCTGGGAAGGTCCCTCCATGGCAGTTCCCACACCCCAGGCTTTAGGAGTCATCACTGCTGCTC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857138 177 - 112192347 CCTGAGCTCTGACTGTGCAAGTTCTGCTGTCTCACTGGGTTTATCTTGGGCTTTTGGGCATCCTCCTTGGTGAGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCCATGGGCTGCTGGGAAGGTCCCTCAGCGGCAGTTCCCACGCCCCAGGCTTTAGGAGTCATCACTGCTGCTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938714 177 - 112612857 CCTGAGCTCTGACTGTGCAAGTTCTGCTGTCTCACTGGGTTTATCTTGGGCTTTTGGGCATCCTCCTTGGTGAGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCCATGGGCTGCTGGGAAGGTCCCTCAGCGGCAGTTCCCACGCCCCAGGCTTTAGGAGTCATCACTGCTGCTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736274 177 - 107442819 CCTGAGCTCTGACTGTGCAAGTTCTGCTGTCTCACTGGGTTTATCTTGGGCTTTTGGGCATCCTCCTTGGTGAGTTGTAAGTGGGGTGTTTTCCTCCAGGGCCTTCCATGGGCTGCTGGGAAGGTCCCTCAGCGGCAGTTCCCACGCCCCAGGCTTTAGGAGTCATCACTGCTGCTC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539421 177 + 108555830 CCTGAGCTCTGACTGTGCAAGTTCTGCTGTCTCACTGGGTTTATCTTGGGCTTTTGAGCATCCTCCTTGGTGAGTTGTAGGTGGGGTGTTTTCCTCCAGGGCCTTCCATGGGCTGCTGGGAAGGTCCCTCAGCGGCAGTTCCCATGCCCCAGGCTTTAGGAGTCATCACTGCTGCTC i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e tarSyr2.KE931122v1 18530 622 + 74297 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=896083.000000 s hg38.chrUn_GL000218v1 42401 302 + 161147 ACTCAGTGCACCCAGGAATGTTGGCCTGCCCCTGGCCTCTGGACAGCCCCCAAGGACCCAAACTCTGGGGGCCCAGATGCCCGCCCAGGCTGCCCCTCAGGGCTCTGTGTT-GGGAAAGACCATCCTCACACCAAGAACAGGAGGAAGACCCTATGTTTCTTATTACTGCCTGGACAGTTTAATTTTCTGTGTGTAGGAACAAGCCTTTTTTCCCTGTGATTGTGGTCTTTGCTTCGACCACCAGCTACCTCCTTGTGTGCCAGGGCCCGAGTCCTGCACCCCTCTGTCCCTGGGTTTGCCTC s panTro4.chr2A 18572361 299 - 113622374 ACTCAGTGCACCTGGGAACGTTGGCCTGCCCTTGGCCTCTGGACAGCCCCTGAGGACCCAAACTCTGGGGGCCCAGATGCCCGCCCAGGCTGCCCCTCAGGGCTCTGTGCT-GGGAAAGGCCATCCTCACACCAAGAACAGGAGAAGGACCCTGTGTTT-TTCTTACTGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCTCTGTGATTGGGGTCTTTGCCTCAACCACTGGGTACTTCCTTGTGTGCCAGGGCCCGGGTCCTGCGCCCCTCTATCCCTGGGTTTGCCTC i panTro4.chr2A C 0 C 0 s panPan1.AJFE01003251 194 302 + 1027 ACTCACTGCACCCAGGAACGTTGGCCTGCCCCTGGCCTCTGGACAGCCCCTGAGGACCCAAACTCTGGGGGCCCAGATGCCCGCCCAGGCTGCCCCTCAGGGCTCTGTGTT-GGGAAAGGCCATCCTTACACCAAGAACAGGAGGAAGACCCTGTGTTTCTTCTTACTGCCTGACCCGTTTAATTTTCTGTGTGTAGGAACAAGCCTTTTTTCCATGTGATTGGGGTCTTTGCCTCGACCACCAGCTACCTCCTTGTGTGCCAGGGCCCGAGTCCTGCACCCCTCTGTCCCTGGGTTTGCCTC i panPan1.AJFE01003251 N 0 C 0 s ponAbe2.chrUn 11810646 299 + 72422247 ACTCAGTGCACCCAGGAACGTTGGCCTTCCCCTGGCCTCTGGACAGCCCCTGAGGACCCAAACTCTGGGGG-CCAGATGCCCGCCCAGGCTGCCCCTCAGGGCTCTGTGCT-GGGAAAGGCCATCCTCACACCAAGAATAGGAGAAGGACCCTGTGTTTCTTCTTACTGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTCCCCTGTGATTGGCGTCTTTGCCTCGACCACCGGCTACCTCGTTGTGTGCCAGGGCCCGAGTCCTGCACCCCTCTGTCCCTGGGTTTGCCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757645 294 + 122973662 ACTCAGTGCACCCAGGAACGTTGGCC-------AGCCCCTGGACAGCCCCTGAGGACTCAAACTCTGGGGGCCCAGATGCCCGCCCAGGCTGCCCCTCAGGGCTCTGTGCTGGGGAAAGGCCATCCTTACACCAAGAACAGGAGGAGGACCCTGTGTTTCTTCTTAATGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCCCTGTGATTGGGGTCTTTGCCTCGACCACTGGCTACCTCCTTGTGTGCCAGGGCCGGAGTCCTGCACCCCTCTGTCCCTGGGTTTGCCTC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857315 300 - 112192347 CCTCAGTGCACCCAGGAACATTGGCCTGCCCCTGGTGCCTGAACAGCCCCTGAGGAACCAAACTCTAGGGGCCTAGATGCCTGCCCAGGCTGCCCCTCAGGGATCTGTGCT-GGGAAAGACCATGCTCACAGCAAGAACAGGAGGAGGATCCTATGTTTCTTCTTACTGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCCCTGTGATTGGGGTCTTTGCCTTGACCACCGGCTACCTCCGTGTGTGCCAGGGCCCGAGTCCTGCGCCCCTCTGTCCCTGGGTTTGCCTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3938891 300 - 112612857 CCTCAGTGCACCCAGGAACATTGGCCTGCCCCTGGTGCCTGAACAGCCCCTGAGGAACCAAACTCTAGGGGCCTAGATGCCTGCCCAGGCTGCCCCTCAGGGATCTGTGCT-GGGAAAGGCCATGCTCACAGCAAGAACAGGAGGAGGATCCTGTGTTTCTTCTTACTGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCCCTGTGATTGGGGTCTTTGCCTTGACCACCGGCTACCTCCGTGTGTGCCAGGGCCCGAGTCCTGCGCCCCTCTGTCCCTGGGTTTGCCTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736451 300 - 107442819 CCTCAGTGCACCCAGGAACATTGGCCTGCCCCTGGTGCCTGAACAGCCCCTGAGGAACCAAACTCTAGGGGCCTAGATGCCTGCCCAGGCTGCCCCTTAAGGATCTGTGCT-GGGAAAGGCCATGCTCACAGCAAGAACAGGAGGAGGATCCTGTGTTTCTTCTTACTGCCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCCCTGTGATTGGGGTCTTTGCCTTGACCACTGGCTACCTCCGTGTGTGCCAGGGCCCGAGTCCTGCGCCCCTCTGTCCCTGGGTTTGCCTC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539598 300 + 108555830 CCTCAGTGCACCCAGGAACATTGGCCTGCCCCTGGTGCCTGAACAGCCCCTGAGGAACCAAACTCTAGGGGCCTGGATGCCTGCCCAGGCTGCCCCTCAGGGATCTGTGCT-GGGAAAGGCCATGTTCACAGCAAGAACAGGAGGAGGACCCTGTGTTTCTTCTTACTGTCTGGCCAGTTTAATTTTCTGTGTGTAGGAACAAGCC--TTTTCCCTGTGATTGGGGTCTTTGCCTCGACCACCGGCTACCTCCGTGTGTGCCAGGGCCCGAGTCCTGCGCCCCTCTGTTCCTGGGTTTGCCTC i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e tarSyr2.KE931122v1 18530 622 + 74297 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=-2376.000000 s hg38.chrUn_GL000218v1 42703 3 + 161147 --T--------TC s panTro4.chr2A 18572660 3 - 113622374 --T--------TC i panTro4.chr2A C 0 C 0 s panPan1.AJFE01003251 496 3 + 1027 --T--------TC i panPan1.AJFE01003251 C 0 C 0 s ponAbe2.chrUn 11810945 3 + 72422247 --T--------TC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757939 3 + 122973662 --T--------TC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857615 11 - 112192347 --TTCCTGCACTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939191 11 - 112612857 --TTCCTGCACTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736751 3 - 107442819 --T--------TC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539898 3 + 108555830 --T--------TC i chlSab2.chr12 C 0 C 0 s tarSyr2.KE931122v1 19152 3 + 74297 TGT---------- i tarSyr2.KE931122v1 I 622 N 0 e calJac3.chr5 21627609 765 - 159171411 M e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=125327.000000 s hg38.chrUn_GL000218v1 42706 45 + 161147 CTGCACTGTCAGTGTCTCCATCACTTCGCAGGCACCCTTGTTGCA s panTro4.chr2A 18572663 45 - 113622374 CTGCACTGTCAGTGTCTCCATCACTTGGCAGGCGCCCTTGTTGCG i panTro4.chr2A C 0 C 0 s panPan1.AJFE01003251 499 45 + 1027 CTGCACTGTCAGTGTCTCCATCACTTGGCAGGCGCCCTTGTTGCA i panPan1.AJFE01003251 C 0 N 0 s ponAbe2.chrUn 11810948 45 + 72422247 CTGCACTGTCAGTGTCTCCATCACTTGGCAGGTGCCCTTGTTGCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757942 41 + 122973662 CTGCACT----GTGTCTCCATCACTCGGCAGGCACCGTTGGTGCG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857626 45 - 112192347 CTGCACTGTCAGTGTCTCCATTACTGGGCAGGTGCCCTTGGTGCG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939202 45 - 112612857 CTGCACTGTCAGTGTCTCCATTACTGGGCAGGTGCCCTTGGTGCG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736754 45 - 107442819 CTGCACTGTCAGTGTCTCCATTACTGGGCAGGTGCCCTTGGTGCG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539901 45 + 108555830 CTGCGCTGTCAGTGTCTCCATTACTGGGCAGGTGCCCTTGATGCA i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=84203.000000 s hg38.chrUn_GL000218v1 42751 34 + 161147 GGCAGAGGGTTTGCGGGAGCTGCAGCAGTTCTTG s panTro4.chr2A 18572708 34 - 113622374 GGCAGAGAGTTTGCGGGAGCTGCAGGAGTTCTTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11810993 34 + 72422247 GGCAGAGGGTTTGTGGGAGCTGCAGGAGTTCTTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40757983 34 + 122973662 GGCAGAGGGTTTTCGGGAGCTGCAGGAGTTCTTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857671 34 - 112192347 GGCAGAGGGTTTGCGGGAGCTGTAGGAGTTCTTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939247 34 - 112612857 GGCAGAGGGTTTGCGGGAGCTGTAGGAGTTCTTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736799 34 - 107442819 GGCAGAGGGTTTGCGGGAGCTGTAGGAGTTCTTG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539946 34 + 108555830 GGCAGAGGGTTTGTGGGAGCTGTAGGAGTTCTTG i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21627609 765 - 159171411 M e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=1247415.000000 s hg38.chrUn_GL000218v1 42785 437 + 161147 AGGCACTGAGAGGGTGCAGGGGGATAGGCCTGCAGAAGGggaagggagggaggagggaaggcatgaagggagggagggaCTCAAGGGTTCTTGCCTGAGTTTGGGGGTATGGCAGGAGACCAGCTGCCTCCACCCCACATCTTTCACAAATGTCTACAGGCCTGTAGTG-GTTCTCACGGAGGCCCCAGGCTCTGAGAGCTCAGGGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTCTCTCACCCTATGGGGTTGCCCCATAGACAAGCTGGGCTGGATTGGAAAGTTACAGGTGACAAGGAG--AAGGGGACCTGTGGGTGCAGATCTTCGTGTCCCCGGCTCTGTATAGGATGAATGGGAGCAGTGGCTCCCAGCCTATCCCGCCCTACCTGTCCACACCCGCAGTGCTGGCCCAGACCTGGGTTTCC s panTro4.chr2A 18572742 438 - 113622374 AGGCACTGAGAGAGTGCAGGGGGAAGGGCCTGCAGAAGGGTAAAGAAGGGAGGAGGGAAGGCATGAGGGGAGGGAGGGACTCAAGGGTTCTTGCCTGAGCTT-GGGGTATGGCAGGAGACCAGCTGCCCCCACCCCACATCTTTCACGAATGTCTACAGGCCTGTAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCTGGGCCAGGACTGAGTTACTCTCTCACCCTATGGGGCTGCCCCACAGACAAGCTGGGCTGGATTGGGAAGTTATAGGGGACATGGAGGAGAGGGGACCTGTGGGTGCAGATCTTTGTGTCCCCGGCTCTGTATAGGATGAATGGGAGCAGTGGCTCCCAGCCCACCCCACCTTACCTGTCCACACCTGCAGTGCTGGCCCAAACCTGGGTTTCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811027 436 + 72422247 AGGCAC--AGAGGGTGCAGGGGGAAGGCCCTGCAGAAGTggaagggagggaggagggaaggcatgaggggagggagggaCTCAAGGGTTCTTGCCTGAGCTT-GGGGTATGGCAGGAGACCAGCTGCCCCCACCCCACATCTTTCACGAATGTCTACAGGCGTGTAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTGTCTCATCCTGTGGGGCTGCCCCACAGACAAGCTGGGCTGGATTGGGAAGTTATAGGGGACATGGAGGAGAGGGGACCTGTGGGTGCAGATCTTGGTGTCCCCAGCTCTGTATAGGATGAATGGGAGCAGTGGCTCCCAGCCCACCCCACCTTATCTGTCCACACCTACAGTGCTGGCCCAGATCTGGGTTTCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758017 438 + 122973662 AGGCACTgagagggtgcagggggaagggcctgcagaaggggaagggagggaggagggaaggcatgaggggagggagggaCTC-AGGGTTCTTGCCTGAACTTGGGGGTATGGCAGGAGACCAGCTGTCCCCACCCCACATCTTTTACGAATGTCTACAGGCCTGTAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGATCAGATAATTATCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTCTCTCACCCTATGGGGCTGCCCCACAGACAAGCTGGGCTAGATTGGGAAGTTACAGGGGACATGGAGGAGAGGGGACCTGTGGGTGCAGATCTTTGTGGTCCCTGCTCTGTATAGGATGAATGGGAGCGGTGGCTCCCAGCCCACCTCACCCTACCTGTCCACGCCCGCAGTGCTGGCCCAGGCCTGGGTTTTC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3857705 432 - 112192347 AGGCACTgagggggtgcagggggaggggtct------ggggaagggagggaggagggaaggcatgaagggaggaatgaaCTCAAGGGTTCTTGCCTGAGCTTGGGGGTGTGGCAGGAGAACAGCTGCCCCCACCCGACATCTTTCATGAATGTCTACGGGCTTGCAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTTTCTCACCCTATGAGGCTGCCTCACTGACAAGCTGGGCTGGATTCGGAAGTTACA-GGGACATGGAGGAGAGGGGACCTACGGGTGCAGATCTTTGTTGCCCGGGCTCTGTATAGGATGAATGGGAGCGGTGGCTCCCAGCCCACCCCACCCTAGCTGTCCACACCGGCAGTGCTAGTTCAGGCCTGGGTTTCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939281 432 - 112612857 AGGCACTgagggggtgcagggggaggggcct------ggggaagggagggaggagggaaggCATGAAGGGAGGAATGAACTCAAGGGTTCTTGCCTGAGCTTGGGGGTGTGGCAGGAGAACAGCTGCCCCCACCCCACATCTTTCATGAATGTCTACGGGCTTGCAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTTTCTCACCCTATGAGGCTGCCTCACTGACAAGCTGGGCTGGATTTGGAAGTTACA-GGGACATGGAGGAGAGGGGACCTACGGGTGCAGATCTTTGTTGCCCGGGCTCTGTATAGGATGAATGGGAGCGGTGGCTCCCAGCCCACCCCACCCTAGCTGTCCACACCAGCAGTGCTAGTTCAGGCCTGGGTTTCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3736833 433 - 107442819 AGGCACTgagagggtgcagggggaggggtct------ggggaagggagggaggagggaaggcatgaagggaggaaTGAACTCAAGGGTTCTTGCCTGAGCTTGGGGGTGTGGCAGGAGAacagctgcccccaccccacatcTTTCATGAATGTCTATGGGCTTGCAGTG-GTTCTCAGGGAGGCCCCGGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTTTCTCACCCTATGAGGCTGCCTCACTGACAAGCTGGGCTGGATTCGGAAGTTACAGGGGACATGGAGGAGAGGGGACCTGCGGGTGCAGATCTTTGTGGCCCGGGCTCTGTATAGGATGAATGGGAGCGGTGGCTCCCAGCCCACCCCACCCTAGCTGTCCACACCCGCAGTGCTAGCTCAGGCCTGGGTTTCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108539980 433 + 108555830 AGGCACTGAgagggtgcagggggaggggcct------ggggaagggagggaggagggaaggcatgaagggagggaTGAACTCAAGGGTTCTTGCCTGAGCTTGGGGGTGTGGCAGGAGAACAGCTGCCCCCACCCCACATCTTTCATGAATGTCTAGGGGCTTGCAGTG-GTTCTCAGGGAGGCCCCAGGCTCTGAGAGGTCAGAGAATTCTCCAGAGCCAGCATCAGGGCCAGGACTGAGTTACTTTCTCACCCTATGAGGCTGCCCCACAGACAAGCTGGGCTGGATTCAGAAGTTACAGGGGACATGGAGGAGAGGGGACCTGCGGGTGCAGATCTTTGTGGCCCGGTCTCTGTATAGGATGAATGGGAGCGGTGGATCCCAGCCCACCCCACCCTAGCTGTCCACACCCGCAGTGCTAGCTCAGGCCTGGGTTTCC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21628374 434 - 159171411 AAGCACTGAGAGGGTGCAGGGGGAAGGGCCTGCTGAAggggaagggagggaggagggaagacaggaggggagagagggaCTCAA-GGTCCTGGTCTGAGCTTGGGGGTGTGGCAGGAGACCAGCTGCCCCCA-CCGACATCTTTCAGGAATGTCCACAGGCCTGCAGTGCATTCTCA-GGAGGCCCCAGGCtctgagaggtcagagaattctgcagagccagcagcagagctaggactgagttaccctctcatcc--tgaggcTGCCCCACAGACAAGCTGGGCTGGATTAGGAAGGTACAGGGGACATGGAGGAG-GGGGACCTGCCGGTGCAGATCTTTGAGGCCCCTGCTGTGTGTAGGATGAATGGGAGCGGTGGCTCCCAGCCGACCCCACGACACCCGTCCACACCTGCAGTGCTGGCCCAGGACTGGGTTTCC i calJac3.chr5 M 765 I 24 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=52800.000000 s hg38.chrUn_GL000218v1 43222 21 + 161147 ACCTCGGGAGCAACTGTCCCA s panTro4.chr2A 18573180 21 - 113622374 ACCTTGGGAGCAACTGTCCCA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811463 21 + 72422247 ACCTCAGGAGCAACTGTCCCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758455 21 + 122973662 ACCTCGGGAGCAACTGTCCCA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858137 21 - 112192347 ACCTCGGGAACAACTGTCCCA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939713 21 - 112612857 ACCTCGGGAACAACTGTCCCA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737266 21 - 107442819 ACCTCGGGAACAACTGTCCCA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540413 21 + 108555830 ACCTCGGGAACAACTGTCCCA i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21628808 24 - 159171411 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=9755.000000 s hg38.chrUn_GL000218v1 43243 5 + 161147 ATCAG s panTro4.chr2A 18573201 5 - 113622374 GTGAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811484 5 + 72422247 GCCAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758476 5 + 122973662 GCCAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858158 5 - 112192347 GCCAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939734 5 - 112612857 GCCAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737287 5 - 107442819 GCCAG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540434 5 + 108555830 GCCAG i chlSab2.chr12 C 0 C 0 s micMur1.scaffold_166084 159 5 - 858 TCCCG i micMur1.scaffold_166084 N 0 I 44 e calJac3.chr5 21628808 24 - 159171411 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=10997.000000 s hg38.chrUn_GL000218v1 43248 8 + 161147 GGAGGGTC s panTro4.chr2A 18573206 8 - 113622374 GGAGGGTC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811489 8 + 72422247 GGAGGGTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758481 8 + 122973662 GGACGGTC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858163 8 - 112192347 CTATGGTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939739 8 - 112612857 CTATGGTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737292 8 - 107442819 CTATGGTC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540439 8 + 108555830 CTATGGTC i chlSab2.chr12 C 0 C 0 e micMur1.scaffold_166084 164 44 - 858 I e calJac3.chr5 21628808 24 - 159171411 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=51538.000000 s hg38.chrUn_GL000218v1 43256 10 + 161147 TCTG-------------------------GGGAGC s panTro4.chr2A 18573214 30 - 113622374 TCTGGGGAGGTGCCTTGTGGCT-----TAGGGAGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811497 35 + 72422247 TCTGGGGAGATGCCTTGTGGCTCAGCCCAGGGAGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758489 35 + 122973662 TCTGGAGAGGTGCCTTGTAGCTCAGCCCAGGGAGC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858171 35 - 112192347 TTTGGGGAGGTGCCTTGTGGCTCAGTTCAGGGATC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939747 35 - 112612857 TTTGGGGAGGTGCCTTGTGGCTCAGTTCAGGGAGC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737300 35 - 107442819 TTTGGGGAGGTGCCTTGTGGCTCAGTTCAGGGACC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540447 35 + 108555830 TTTGGGGAGGTGCCTTGTGGCTCAGTTCAGGGAGC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21628832 10 - 159171411 -------------------------TCCTGGGAGC i calJac3.chr5 I 24 C 0 e micMur1.scaffold_166084 164 44 - 858 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=2395.000000 s hg38.chrUn_GL000218v1 43266 1 + 161147 C s panTro4.chr2A 18573244 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811532 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758524 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858206 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939782 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737335 1 - 107442819 C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540482 1 + 108555830 C i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21628842 1 - 159171411 T i calJac3.chr5 C 0 C 0 s micMur1.scaffold_166084 208 1 - 858 T i micMur1.scaffold_166084 I 44 N 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=3969481.000000 s hg38.chrUn_GL000218v1 43267 1367 + 161147 CAGGGTCAGGATGACTGTGCCAGGACTCAAAGGTATTGGAGGAGG----------AGAGGAGAAACAGCTGCTTGGAAGTCAGGGGCCTTCTGGGGCAAAACTGCCTC-----CTGTCACTAAGGGGCCAGATTTCGGGACTCAGGTGTCTCACGCATAGAGGGCTGGTCTCCCGTGTGCTTGCAGCAGCCACGTGGCTTGTCCACATGAACTGC-----------CGGGGGCTCCTCCTCTCTGTGCCCACAAGTCCTGGCCACCCAAGGCTGCTGGCACCTTCAGCAGCTCCGTCTCCACATGGTCATGCACAAGGTTGGCGTGCTGGTGGCACTGGCTGCACTGCAGGTTGTCAGTGGCAATGGAGAAGGGCACCTCCATGGCATCCAGGGCGCACTCCAGCCGTTGCTTCTGGGCCAGCAGCAGGTCGGTCTCCGCAGCCAGCACCTTCACCTCGCGCTGCAGCTCCGACTTCCAGCTGTGCGTGTCCTGCAGTCGCTCGCCCACCCTGCACGTGGAGTCTTGCTGTGTCGACTGTGCCAGCGCCTGGGTCTCTGCGGCCAGCTGCTGGCTCTCGTGCCCCTGCAGCTCCCGCTCTGACTGGTTGCAGTCGGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACACCTCC----------------------AGCTGGCGGTGGCCAGGCCGGAGGACGTGTAGACGCCCGTGTTGCGGGCCATGTCATACTCTTTGCAGGGCAGCTCGCAGGGCGACACTGTCTGCGGTGCCGGCTCT---GGTAGGAGCACATCCGTCTGCACCATGGTGTCTGCCGCCCACCAGGGCCAGGGGAGTGAGGAGTGTGTGTGGTCAGCTTGTTGCGGTCAGCCCAGTGCAGTCATC-GGTCGGCTCCAAAGGCTCAGTCCCAGAGCAGGACGTGGCTCCCAGTCGCTTGGGTGACAC--AGTAAACCAAGAGCTTCCTGTTGCCAAGAAAC-GGGATCTCTTCTCCAGTGGCTAGGGGAGGGGGCATTCAGGGCGGCGGGCAGAATTGCCCTTTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCACCTCGGGGCAATCAACAGTGGCCAAGGGTTCCTGTCACTTAGAGGATCCCAGGGCCAGCCCGTCTCCAGCCTCTGTGTCCCACCCTTAGGGTTCAGGGTGTGGGTGGGGACCTACTGCCCTGGCCCCTTCGTTGATTCATCCAT---TTGTTCCTGGTTT-GCTCTCTGATCCTGTCCTGTGTGGAGCTCCACGCTCAGGGTGAACAAGACAGAGGAGGCTCTGCCCACCT---GCCCCCTCAGGGCAGAGggctgtggctgttgtgtggatgttgggtgtgctgAGTGATAGTGTTACTTGATG-------CCGTACAGGTGGCTGCTCTCCCTGC s panTro4.chr2A 18573245 1358 - 113622374 CAGGGTCAGGATGACTGTGCCAGGACTCAAAGGGATTAGAGGAGG----------AGAGGAGAAACAGCTGCTTGGAAGTCAGGGGTCTTCTGGGGCAAAGCTGCCTC-----CTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGGTCTCACGTGCAGAGGGCTGGGCTCCCGCGTGCTTGCAGCAGCCACGTGGCTTGTCCACATGAACTGCG------GGGTGGGGGGCTCCTCCTCTCTGCGCCCACAAATCCCGGCCACCCAAGGGTGCTGGCACCTTCAGCAGCTCCGTTTCCACATGGTCGCGCACGAGGTTGGGGTGCTCGCGGCGCTCACGGCACTGCAGGTTGTCAGTGGTGATAGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCCAGCCGTTGCTTCTGGGCCAGGAGCAAGTTGGTCTCCGCAGCCAGCGCCTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCGTGTCCTGCAGTCGCTCGCCCACTGTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCTGTGGCCAGCTGCTGGCTCTCGTGCC------GCTGCCGCTCCGACTGGTCGCGGTCGGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGAGGTGCGGAAGCTGGCGGTGGCCAGGCCGGAGGACGTGTAGGCGCCCGTGTTGCGGGCCACGTCGTACTCTTTGCAGGGCAGCTCGCAGGGCGGCACTGTCTGCG------------------------------------CCATGGTGCCTGCTGCCCACCAGGGCCAGGGGAGTGAGGAGTGTGTGTGGTCAGCCGGTTGCGGTCAGCCTAGTGCGGTCAGCGGGGCAGCTCCAACGGCTCAGTCCCAGAGCAGGGCGCGGCTCCCAGTCGCTTGGGTGACACTGTGTAAACCAAGAGCTTCCTGTTGCCAAGAAAC-GGGATCTCTTCTCCAGTAGCTAGGGGA-GGGGCATTCAGGGTGGCGGGCAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCGCCTTGGGGCAATCAACAGTGGCCAAGGGTTCCTGTCACTTAGAGGATCCTGGGGCCAGCCCGTCTCCAGCCTCTGAGTCCCACCCTTAGGGTTCAGGGTGTGGGTGGGGACCTACTGCCCTGGCCCCTTCCTTGGTTCATCCAT---TTGTTCCTGGTTT-GCGCTCTGATCCTGTCCTGTGTGGAGCTCCGCGCTCAGGGTGAACAAGAC--GGGAGACTCTGCTCACTTGCAGCCGCCTCAGGGCAGAGGGCTGTGGCTGTCGTGTGGGTGTTGGGTGTGCTGACTGATAGTGTTACTTGATG-------CCGTACAGGTGGCTGCTCTCCCTGC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11811533 1395 + 72422247 CAGGGTCAGGATGACTGTGCCAGGACTCAAAGGGATTGGAAGAGG----------AGAGGAGAAACAGCTGCTTGGAAGTCAGGGGTCTTCTGGGGCAAAGCTGCCTC-----TTGTCACTAAGGGGCCGGATTTCGGGACTC--GGGTCTCACGTGCAGAGGGCTGGGCTCCCGCGTGCTTGCAGTAGCCACGTGGCTTGTCCACGTGAACTGCGGTGGGTGGGTGGGGGGCTCCTCCTCTCT--GCCCACAAGTCCCAGCCACCCAAGGCTGCTGGCACCTTCAGCAGCTCCGTCTCCACATGGTCGCGCACGAGGTTGGGGTGCTGGCGGCGCTCGCGGCACTGCAGGTTGTCAGTGGCGATGGAGAAGGGCACCTCAGTGGCGTCCAGGGCGCGCTCCAGCCGTTGCTTCTGGGCCAGGAGCAGGTCGGTCTCCGCAGCCAGCGCTTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCGTGTCCTGCAGTCGCTCGCCCACCGTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCTGCGGCCAGCTGCTGGCTCTCGTGCC------GCTGCCGCTCCGACTGGTCGCGGTCGGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGAAACCACTCCTCCGGCAAGTACTTGGAGGTGCGGAAGCCGGCGGTGGCCAGGCCGGAGGACGTGTAGGCGCCCGTGTTGCGGGCCACGTCGTACTCTTTGCAGGGCAGCTCGCAGGGCGGCACCGTCTGCGGGGCCGGCTCTTTGGTTAGGAGCACATCCGTCTGCGCCATGGTGCCTGCCGCCCACCAGGGCCAGGAGAGTGAGGAGTGTGTTTGGTCGGCCGGTTGTGGTCAGCCTAGTGCGGTCAGCGGGGCAGCTCCAACGGCTCAGTCCTAGAGCGGGACGCGGCTCCCAGTCGCTTGGGTGACAC--TGTAAACCAAGAGCTTCCTGTTGCCAAGAAAC-GGGATCTCTTCTCCAGTAGCTAGGGGAGGGGGCATTCAGGGCGGCGGGCAGAACTGCTCTCTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCGCCTCGGGGCAATCCGCAGTGGCCAAGGGTTCCTGTCACTTAGAGGATCCTGGGGCCAGCCCGTCTCCAGCCTCTGTGTCCCCCCCTTAGGGTTCAGGGTGTGGGTGGGGATCTACTGCCCTGGCCCCTTCCTTGGTTCATCCAT---TTGTTCCTGGTTT-GCTCTCTGATCCTGTCGTGCGCGGAGCTCCGCGCTCAGGGTGAACAAGACAGAGGAGA--CTGCTCACTTGCAGCCCTCTCACGGCAGAGGGCTGTGGCTGTCGTGTGGGTGTTGGGTGTGCTGACTGGTAGTGTTACTTGATG-------CCGTACAGGTGGCTGCTCTCCCTGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40758525 1391 + 122973662 CAGGGTCAGGATGACTGTGCCAGGACTCAAAGGGATTGGAGGACA----------GGAGGAGAAACAGCTGCTTGGAAGTCAGGGGACTTCTGGGGCAAAGCTGCCTCCT-GTCTGTCACTAAAGGGCCAGATTTGGGGACTCAATGGTCTCACGTGCAGAGGGCTGGGCTCCTGCGTGCTTGCAGCAGCCACGTGACTTGTCCACATCAGCTGCC------------GGGGCCCATCCTCTCTGCGCCCACAAGTCCCGGCCACCCAAGGCTGCTGGCACCTTCAGCAGCTCCGTCTCCACATGGTCGCGCACGAGGTTGGGATGCTGGCGGCGCTCACGGCACTGCAGGTTGTCAGTGGCGATGGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCTAGCCGTTGCTTCTGGGCCAGCAGCAGGTCGGTCTCCGCAGCCAGCGCCTCCACTTCGCGCTGCAGCTCCGACTTCCAGCCGTGCGTGTCCTGCAGTCGCTCGCCCACCCTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGTGCCTGGGTCTCCGCGGCAAGCTGCTGGCTCTCGTGCC------GCTGCCGCTCCGACTGGTCGCAGTCGGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGCGGTGCGGAAGCCGGCGGTGGCCAGGCCGGAGGACGTGTAGGCGCCCGTGTTGCGGGCCACGTCGTACTCTTTGCAGGGCAGCTCGCAGGGCGGCACAGTCTGCGGGGCCGGCTCTTTGGTTAGGAGCACATCCTTCTGCGCCATGGTGCCCGCCGCCCACCAGGGCCAGGGGAATGAG--GTGTGTGTGGTCAGTCGGTTGCGGTCAGCCCAGGGAGGTCAGCTGGGCAGGTCCAGCGGCTCAGTCCCAGAGCAGCACGCGGCTCCCAGTCGCCTGGGGGACAC--TGTAAACCAAGAGCTTCCTGTTGCTAAGAAAC-GGGATCCCTTCTCCAGTGGCTGCGGGAGGGGGCATTCAGGGTGGCGGGCAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCCAGCCCCGCCATCCCTGCCCCCGCCTTGGGGCAATCAGCAGTGGCCAAGGGTTCCTGTCACTTAGAGGATCCTGGGGCCAGCCCGTCTCCAGCCTCTGTGTCCCACCCTTAGGGTTCAGGGTGTGGGTGGGGACCTGCTGCCCTGGCCCCTTCCTTGATTCATCCAT---TTGTTCCTGGTTT-GCTCTCTGATCCTCTCCTGTGCGGAGCTCCGCGCTCAGGGTGAACAAGACAGAGGAGGCTCTGCCCACTTGCAGCCCCCTCAGGGCAGAGGGCTGTGGCTGTCATGTGGGTGTTGGGTGTGCTGACTGATAGTGTTACTTGATG-------CCGTACAGGTGGCTGCTCTCCCTGC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3858207 1396 - 112192347 CAGGGTGAGGATGACTGTGCCAGCACTCAAAGGGATTGGAGGACAAA----GCCCAGAAGAGGAACAACTGCTTGGGAGTCAGGGGCCCTCCAGGGCAAAGCTGCCTCCTGGTCTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGTTCCCAAGTGCAGAGGCCTGGGCTCCCGCATGCCTGCAGCAGCCACCTGGCTTGTCCACATGAACTGCC-------------GGGCCCCTCCTCTCTGCGCCCACAAGTCCCGGCCACCAAAGGCTGCTGGCACCTTCAGCAATTCCGTCTCCACATAGTCGCGCACGAGGTTGGGGTGCTGGCGGCGCTCACGACACTGCAGGTTGTCAGTGGCGATGGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCCAGCCTCTGCCTCTGGGCCAGCAACAGGTCGGTCTCCGCAGCCAGCGCTTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCATGTCCTGCAGTCGCTCGCCAACCCTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCCGATGCCAGCTGCTGGCTCTCATGCC------GCTGCCGCTCCGACTGGTCGCGGTCCGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGCGGTGCGGAAGCCTGCGGTGGCCAGCCCGGAGGACGTGTAGGCGCCTGTGTTGCGGGCCACCTCGTACTCTTTGGCCGGCAGCTCGCAGGGCGGCACTGTCTGCGGGGCCGGCTCTTTGGTTAGGAGTACGTCCGTCTGCGCCATGGTGCCAGCCGCCCACCAGGGCCAGGGGAGTGAG----GGGTGTGGCCAGCCGGTTGCGATCAGCCCAGTGCGGTCAGCGGGGCAGCTCCAGCGGCTCAGTCCCAGAGCAGGACGCGGCTCCCAGTCGCCTGGGTGACAC--TGTCAACCAAGAGCTTCCTGTTGCTAAGAAAC-GGGATCCCTTCTCCAGTGGCTGGGGGAGGGGGCATTCAGGGTGGCAGGCAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCGCCTCGGCGCAATCAGCAGTGGCCAAGGGTTCTTGTCACTTAGAGGATCCTGGGGCCAGCCTGTCGCCAGCCTCTGTGTCCCACCCTTAGGGTTTAGGGTGTGGGTGGGGACCTGCTGCCCTAGCCCCTTCCTTGGTCCATCCGT---TTGTTCCTGGTTTGGCTCTCTGAACCTGTCCTGTGGGCA-------GCTCGGGGTGAAAAAGACAGAGGAGGCTCTGCCCACCTGCAGCCCCCTCAGGGCACAGGGGCGTGGCTGTCGTGTGGGTGTCGGGTGTGCTGACTGACAGTGTTACTTGATGTCTCCCACCGTACATGTGGCTGCCCTCCCTGC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3939783 1396 - 112612857 CAGGGTGAGGATGACTGTGCCAGCACTCAAAGGGATTGGAGGACAAA----GCCCAGAAGAGGAACAACTGCTTGGGAGTCAGGGGCCCTCCAGGGCAAAGCTGCCTCCTGGTCTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGTTCCCAAGTGCAGAGGGCTGGGCTCCCGCATGCCTGCAGCAGCCACCTGGCTTGTCCACATGAACTGCC-------------GGGCCCCTCCTCTCTGCGCCCACAAGTCCCGGCCACCAAAGGCTGCTGGCACCTTCAGCAATTCCGTCTCCACATAGTCGCGCACGAGGTTGGGGTGCTGGCGGCGCTCACGACACTGCAGGTTGTCAGTGGAGATGGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCCAGCCTCTGCCTCTGGGCCAGCAACAGGTCGGTCTCCGCAGCCAGCGCTTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCATGTCCTGCAGTCGCTCGCCAACCCTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCCGATGCCAGCTGCTGGCTCTCATGCC------GCTGCCGCTCCGACTGGTCGCGGTCCGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGCGGTGCGGAAGCCTGCGGTGGCCAGCCCGGAGGACGTGTAGGCGCCTGTGTTGCGGGCCACCTCGTACTCTTTGGCCGGCAGCTCGCAGGGCGGCACTGTCTGCGGGGCCGGCTCTTTGGTTAGGAGTACGTCCGTCTGCGCCATGGTGCCAGCCGCCCACCAGGGCCAGGGGAGTGAG----GGGTGTGGCCAGCCGGTTGCGATCAGCCCAGTGCGGTCAGCGGGGCAGCTCCAGCGGCTCAGTCCCAGAGCAGGACGCGGCTCCCAGTCGCCTGGGTGACAC--TGTCAACCAAGAGCTTCCTGTTGCTAAGAAAC-GGGATCCCTTCTCCAGTGGCTGGGGGAGGGGGCATTCAGGGTGGCAGGCAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCGCCTCGGCGCAATCAGCAGTGGCCAAGGGTTCTTGTCACTTAGAGGATCCTGGGGCCAGCCTGTCGCCAGCCTCTGTGTCCCACCCTTAGGGTTTAGGGTGTGGGTGGGGACCTGCTGCCCTAGCCCCTTCCTTGGTCCATCCAT---TTGTTCCTGGTTTGGCTCTCTGAACCTGTCCTGTGGGCA-------GCTCAGGGTGAAAAAGACAGAGGACGCTCTGCCCACCTGCAGCCCCCTCAGGGCACAGGGGTGTGGCTGTCGTGTGGGTGTTGGGTGTGCTGACTGACAGTGTTACTTGATGTCTCCCACTGTACATGTGGCTGCCCTCCCTGC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3737336 1397 - 107442819 CAGGGTGAGGATGACTGTGCCAGCACTCAAAGGGATTGGAGGACAAA----GCCCAGAAGAGGAACAACTGCCTGGGAGTCAGGGGCCCTCCAGGGCAAAGCTGCCTCCTGGTCTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGTTCCCAAGTGCAGAGGGCTGGGCTCCCGCATGCCTGCAGCAGCCACCTGGCTTGTCCACATGAACTGCC------------GGGGCCCCTGCTCTCTGCGCCCACAAGTCCCGGCCACCAAAGGCTGCTGGCACCTTCAGCAATTCCGTCTCCACATGGTCGCGCACGAGGTTGGGGTGCTGGCGGCGCTCACGACACTGCAGGTTGTCAGTGGCGATGGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCCAGCCGCTGCTTCTGGGCCAGCAACAGGTCGGTCTCCGCAGCCAGCGCTTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCATGTCCTGCAGTCGCTCGCCAACCCTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCCGATGCCAGCTGCTGGCTCTCATGCC------GCTGCCGCTCCGACTGGTCGCGGTCCGCGAAGGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGCGGTGCGGAAGCCTGCGGTGGCCAGCCCGGAGGACGTGTAGGCGCCTGTGTTGCGGGCCACCTCGTACTCTTTGGCGGGCAGCTCGCAGGGCGGCACTGTCTGCGGGGCCGGCTCTTTGGTTAGGAGTACGTCCGTCTGCGCCATGGTGCCAGCCGCCCACCAGGGCCAGGGGAGTGAG----GGGTGTGGCCAGCCGGTTGCGATCAGCCCAGTGCGGTCAGCGGGGCAGCTCCAGCGGCTCAGTCTCAGAGCAGGACGCGGCTCCCAGTCGCCTGGGTGACAC--TGTCAACCAAGAGCTTCCTGTTGCTAAGAAAC-GGGATCCCTTCTCcagtggctgggggagggggcattCAGGGTGGCAGGCAGAACTGCCCTCTTAAAGGGCcaggcagccccagccccaccatCCCTGTCCCTGCCTCTGCGCAATCAGCAGTGGCCAAGGGTTCTTGTCACTTAGAGGATCCTGGGGCCAGCCTGTCGCCAGCCTCTGTGTCCCACCCTTAGGGTTTAGGGTGTGGGTGGGGACCTGCTGCCCTAGCCCCTTCCTTGGTCCATCCAT---TTGTTCCTGGTTTGGCTCTCTGAACCTGTCCTGTGGGCA-------GCTCAGGGTGAAAAAGACAGAGGAGGCTCTGCCCACCTGCAGCCCCCTCAGGGCACAGGGGTGTGGCTGTCGTGTGGGTGTTGGGTGTGCTGACTGACAGTGTTACTTGATGTCTCCCACTGTACATGTGgctgccctccctgc i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108540483 1403 + 108555830 CAGGGTGGGGATGACTGTGCCAGCACTCGAAGGGATTGGAGGACAAA----GCCCAGAAGAGGAACAACTGCTTGGGAGTCAGGGGCCCTCCAGGGCAAAGCTGCCTCCTGGTCTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGTTCCCAAGTGCAGAGGGCTGGGCTCCCGCATGCCTGCAGCAGCCACCTGGCTTGTCCACATGAACTGCC------------GGGGCCCCTCCTCTCTGCGCCCACAAGTCCCGGCCACCCAAGGCTGCTGGCACCTTCAGCAATTCCGTCTCCACATAGTCGCGCACGAGGTTGGGGTGCTGGCGGCGCTCACGACACTGCAGGTTGTCAGTGGCGATGGAGAAGGGCACCTCCGTGGCGTCCAGGGCGCGCTCCAGCCGCTGCTTCTGGGCCAGCAACAGGTCGGTCTCCGCAGCCAGTGCTTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCATGTCCTGCAGTCGCTCGCCAACCCTGCGCGTGGAGTCCTGCTGCGTGCGCTGCGCCAGCGCCTGGGTCTCCGACGCCAGCTGCTGGCTCTCATGCC------GCTGCCGCTCCGACTGGTCGCGGTCCGCGAACGCCTGGTGGTAGCGAGCATAGCAGTTCTGGAACCACTCCTCCAGCAGGTACTTGGCGGTGCGGAAGCCTGCGGTGGCCAGCCCGGACGACGTGTAGGCGCCTGTGTTGCGGGCCACCTCGTACTCTTTGGCGGGCAGCTCGCAGGGCGGCACTGTCTGCGGGGCCGGCTCTTTGGTTAGGAGTATGTCCGTCTGCGCCATGGTGCTAGCCGCCCACCAGGGCCAGGGGAGTGAG----GGGTGTGGCCAGCCGGTTGCGATCAGCCCAGTGCGGTCAGCGAGGCAGCTCCAACGGCTCAGTCCCAGAGCAGGACGCGGCTCCCAGTCGCCTGGGTGACAC--TGTCAACCAAGAGCTTCCTGTTGCTAAGGAAC-GGGATCCCTTCTCCAGTGGCTGGGGGAGGGGGCATTCAGGGTGGCAGGCAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCCAGCCCCACCATCCCTGTCCCCGCCTCGGCGCAATCAGCAGTGGCCAAGGGTTCTTGTCACTTAGAGGATCCTGGGGCCAGCCTGTCGCCAGCCTCTGTGTCCCACCCTTAGGGTTTAGGGTGTGGGTGGGGACCTGCTGCCCTAGCCCCTTCCTTGGTCCATCCAT---TTGTTCCTGGTTTGGCTCTCTGAACCTGTCCTGTGCGCAGCTCTGCGCTCAGGGTGAACAAGACAGAGGAGGCTCTGCCCACCTGCA-CCCCCTCAGGGCAGAGGGGTGTGGCTGTCCTGTGGGTGTTGGGTGTGCTGACTGACAGTGTTACTTGATGTCTCCCACTGTACATGTGGCGGCCCTCCCTGC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21628843 1354 - 159171411 CAGGGTCAAGATGACTGTGCCAGG--TCAAAGGGGTTGGAGGAGGAGAAATACCCAGAGGAGAAATAGCTGCTTGGAAGTTAGT-----------------------------CTGTCACTAAGGGGCCAGATTTCGGGACTCAGGGGTCCCACGTGCAGAGGGCTGGGCTCCCGCA----------AGCCACGTGGCTTGTCCACATGAACTGCC------------AGGGCCCCTCCTCTCTATGCCCACAAGTCCTGGCCAACCCAGGCTACTGGCACCTTCAGCAGCTCCGTCTCCACGTGGTCGCGCACGAGGTTAGGGTGCTGGCGGCGCTCGCGGCACTGCAAGTTGTCAGTGGCGATGGAGAAGGGCACCTCCGTGGCGTCCAGTGCGCGCTCCAGCCGCTGCTTCTGGGCCAGCAGCAGGTCGGTCTCCGCGGCCAGCGCCTCCACCTCGCGCTGCAGCTCCGACTTCCAGCCGTGCGTGTCCTGCAGCCGCTCGCCCACCCTGCGCGTGGAGTCTTGCTGCGTGCGCTGCGCCAGAGCCTGGGTCTCCGCCGCCAGCTGCTGGCTCTCGTGCC------GCTGCCGCTCGGACTGGTCGCGGTCGGCAAAGGCCTGGTGGTAGCGCGCGTGGCAGTTCTGGAACCACTCCTCCAGCAGGTATTTGGCGGTGCGGAAGCCGGAGGTGGCCAGGCCCGAGGACGTGTAGGCGCCCGTGTTGCGGGCCACCTCGGACAGTTTGCAAGGCAGCTCGCAGGGCGGCACCGTCTGCGGGGCCGGCTCTTTGGTCAGCAGCACGTCCGTCTGCGCCATGGTGCCCGCCGTCTACCAGGGCCAGGGGAGTGAG----GGGTGTGGTCAGCTGGTCGCGGTCAGCCCCGTGAGGTCAGCGGGGCAGCTCCAGCGGCTCAGTCCCAGAGCAGGACGCGGCTCCCAGTCGCCTGGGTGACAC--TGTACACCAAGATCTTCCTGTTGCTGAGCAACGGGGATCTCTCCTCCAGTGGCTGGGGGAGGGGGCATTCTATGGGACAAGAAGAACTGCCCTCTTAAAGGGCCAGGCAGCCCAAGCCCTGCCCTCCCTGTCCCCACCTC-ATGCCATCAGCAGTGGCCAAGGGTTCCTGTCACTTAGAGGATCCTGGGACCAGCCTGTTTCCAGCCTCTGTGTCCCACCCTTAGGGTTGAGGGTGTGGGTGGAGACCTGCTGCCCTGGCCCCTTCCTGGGTTCATTCATTTGTTGTTTCTGGTTT-GCCCTCTGATCTCGTCCTGTGCGGAGCTCC---------GTGGACAAGACAGAGGAGGCTCTGCCCACCTG------CCTCCGGGCAGAGGGGTGTGGCTGTCGCGCGGATGTTGGGGGTGCTGGCTGATAGTGTTACCTGATGTCTACAGCCCTACAAGTAGTTGCTCTTCCAGC i calJac3.chr5 C 0 M 327 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=129434.000000 s hg38.chrUn_GL000218v1 44634 54 + 161147 CCTCCTGGCCCCAACAGCAGCCTGGTAGCACAGGGAGGGTCCCAGGCCAGGCCC s panTro4.chr2A 18574603 54 - 113622374 CCTCCTGGCCCCAACAGCAGCCTGGTAGCACAGGGAGGGTTCCAGGCCAGGTCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11812928 54 + 72422247 TCTTCTGGCCCCAACAGCAGCGTGGTAGCACAGGGAGGGTCCCAGGCCAGGTCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40759916 54 + 122973662 CCTCCTGGCCCCAACAGCAGCCTGGTAGCACAGGGAGGGTCCCAGGCCAGGCCC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3859603 54 - 112192347 CCTCCTGACCCCAACGGCAGCCTAGTAGCACAGAGAGGGTCCCAGGTCAGGCCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3941179 54 - 112612857 CCTCCTGACCCCAACGGCAGCCTAGTAGCACAGAGAGGGTCCCAGGTCAGGCCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3738733 54 - 107442819 cctcctgaCCCCAACGGCAGCCTGGTAGCACAGAGAGGGTCCCAGGTCAGGCCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108541886 54 + 108555830 CCTCCTGACCCCAACGGCAGCCTGGTAGCACAGAGAGGGTCCCAGGTCAGGCCT i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21630197 327 - 159171411 M e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=1371071.000000 s hg38.chrUn_GL000218v1 44688 473 + 161147 CCTCAGGGGCAGTCTGGGGCAG----------TTCCTGCAGGGACTCCGCTCCATTTTCTCCTGGACCTAGTGCCTGAGAGCCAGGCCCTGGCCTCTGGCCTTCTCCTCCCAAGTCCCAGCCAGTGTCCCCTCAGGCTGGGCACAGCGGGGAGGGAGGGAGTCTGAGTGTGCTTTTCCCTGGGGAGTTGAATTCAGCCTCTGGATAAGTGTCCAGAGTCATATGCCCAAATCTGCCCCACAGGGCAGAGGCAGGTCTTGTGCTGCGGAGGCTGCCCTGAAAGCCACCCAGGGCCATGCTGCCTGGCGGAGGCTGGATGGGCAGTAAGCACCCCAGGACACATCGGCGTCCCCCAAACCTGGGGCCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCACGCAGCCAGCGAAGGGCGGCTTTGGCCTGGCGGTGAGAAGCCTGCGGCTCCTGGCTCGGCCTCCCCTCCGCCTGCCTGGCGCATGCA s panTro4.chr2A 18574657 469 - 113622374 CCTCGGGGGCAGTCTGAGGCAG----------TTCCTGCAGGAACTCTGCTCCATTTTCTCCTGCACCTAGTGCCTGAGAGCCAGGCCCTGGCCTCTGGCCTTCTCCTCCCAAGTCCCAGCCAGGGTCCCCTCAGGTTGGGCACAGCG----GGGAGGGAGTCTGAGTGTGCTCTTCGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGACGCCCAAATCTGCCCCACAGGGCGGAGGCAGGTACTATGCCGCGGAGGCTGCCCTCAAAGCCATTCAGGGCCAGGCTGCCTGGTGGAGGCTGGATGGGCAGGAAGCGCCCCAGGACACATCGGAGTCCCCCTAACCTGGGGCCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCACACGGCCAGCGGAGGGCGGCATTGGTCTGGCACTGAGAAGCCTGCAGCTCCTGGCTCGGCCTCCCCTCCGTCTGCCTGGCGCATGCA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11812982 469 + 72422247 CCTCGGGGGCAGTCTGAGGCAG----------TTCCTGCAGGGACTCTGCTCCATTTTCTCCTGGACCTAGTGCCGGAAAGCCAGGCCCTGGCCTCTGGCCTTCTCCTCCCAAGTCCCAGCCAGGGTCCCCTCAGGCTGGGCACAGCG----GGGAGGGAGTCTGAGTGTGCTCTTCCCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGACGCCCAAATCTGCCCCACAGGGCGGAGGCAGGTCCTGTGTTGCGGAGGCTGCCCTCAAAGCCACCCAGGGCCAGGCTGCCTGGCGGAGGCTGGATGGGTAGGAAGCGCCCCAGGACAAATCGGAGTCCCCCAAACCTGGGGCCAGGGGAGCCCCAGCCTAAGCGCGATTCCCCACGCGGCCAGCGGAGGGCGGCGTTGGTCTGGCAGTGAGAAGCCTGCGGCTCCTGGCTCGGCCTCCCCTCCGCCTGCCTGGCGCATGCA i ponAbe2.chrUn C 0 I 525 s nomLeu3.chr1a 40759970 469 + 122973662 CCTCGGGGGCAGTCTGAGGCAG----------TTCATGCAGGGACTCTGCTCCATCTGCTCCTGGACCTAGTGCCTGAGAGCCAGGCCCTGGCCTCTGGCCTCCTCCTCCCAAATCCCAGCCAGGGTTCCCTCAGGCTGGGCACAACG----GGGAGGGAGTCTGAGTGTGCTCTTCGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGAAGCCCAAATTTGCCCTACAGGGCGGAGGCAGGTCCTGTGCTGCGGAGGCTGCCCTCAAAGCCACCCAGGGCCAGGCTGCCTGGCGGAGGCTGGATGGGCAGGAAGCGTCCCAGGACACATGGGAGTCCCCCAAACCTGGGGCCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCACGCGGCCAGCGGAGGGCGGCCTTGGCCTGGCGGTGAGAAGCCTGCGGCTCCTGGCTGGGCCTCCCCTCAGCCTGCCTGGAGCATGCA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3859657 469 - 112192347 CCTCCGGGGCAGTCTGAGGCAG----------TTCCTGCAGGGACTCTGCTCCATCTGCTCCCGGACCTAGTGCCTGAGAGCCAGGCCCTGGCTTCTGGCCTCCTCCTTCCAAGTCCCAGCCAGGGTCCCTTCAGGCTGGGCATAGCG----GGGAGGGAGTCTGAGCGTGCTCTTTGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGACTCCCAAATCTGCCCCACAGGGTGGAGGCAGGTCCTGTGCTGCGGAGGCTGCCCTCAAAGCCACCTAGGGCCAGGCTGCCTGGCAGAGGCTGGATGGGCAGGAAGCGCCCCAGGACACATGGGAGTCCTGCAAACCTGGGGTCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCAGGCGGCCAGCGGAGGGCGGCGTTGGCCTGGCGGTGAGAAGCCTGAGGCTCCTGGCTTGGCCTCCCCTCAGCCTGCCTGGTGCATGCA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3941233 469 - 112612857 CCTCCGGGGCAGTCTGAGGCAG----------TTCCTGCAGGGACTCTGCTCCATCTGCTCCTGGACCTAGTGCCTGAGAGCCAGGCCCTGGCTTCTGGCCTCCTCCTTCCAAGTCCCAGCCAGGGTCCCTTCAGGCTGGGCACAGCG----GGGAGGGAGTCTGAGCGTGCTCTTTGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGACTCCCAAATCTGCCCCACAGGGTGGAGGCAGGTCCTGTGCTGCGGAGGCTACCCTCAAAGCCACCTAGGGCCAGGCTGCCTGGCAGAGGCTGGATGGGCAGGAAGCGCCCCAGGACACATGGGAGTCCTGCAAACCTGGGGTCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCAGGCGGCCAGCGGAGGGCGGCGTTGGCCTGGCGGTGAGAAGCCTGAGGCTCCTGGCTTGGCCTCCCCTCAGCCTGCCTGGTGCATGCA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3738787 469 - 107442819 CCTCCGGGGCAGTCTGAGGCAG----------TTCCTGCAGGGACTCTGCTCCATCTGCTCCTGGACCTAGTGCCTGGGAGCCAGGCCCTGGCTTCTGGCCTCCTCCTTCCAAGCCCCAGCCAGGGTcccttcaggctgggcacagcg----ggGAGGGAGTCTGAGCGTGCTCTTTGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCTAGAGTCAGACTCCCAAATCTGCCCCACAGGGTGGAGGCAGGTCCTGTGCTGCGGAGGCTACCCTCAAAGCCACCTAGGGCCAGGCTGCCTGGCAGAGGCTGGATGGGCAGGAAGCGCCCCAGGACGCATGGGAGTCCTGCAAACCTGGGGTCAGGGGAGCCCCAGCCTAGGCGCGATTCCCCAGGCGGCCAGCGGAGGGCGGCGTTGGCCTGGCGGTGAGAAGCCTGAggctcctggcttggcctcccctCAGCCTGCTTGGCGCATGCA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108541940 449 + 108555830 CCTCCGGGGCAGTCTGAGGCAG----------TTCCTGCAGGGACTCTGCTCCATCTGCTCCTGGACCTAGTGCCTGAGAGCCAGGCCCTGGCTTCGGGCCTCCTCCTTCCAAGTCCCAGCCGGGGTCCCTTCAGGCTGGGCACAGCG----GGGAGGGAGTCTGAGCGTGCTCTTTGCTGGGGAGTTGAATTCAGCCTCTGGGTAAGTGTCCAGAGTCAGACTCCCAAATCTGCCCCCCAGGGTGGAGGCAGGTCCTGTGCTGCGGAGGCTGCCCTCAGAGCCACCTAGGGCCAGGCTGCCTGGCAGAGGCTGGATGGGCAGGAAGCGCCCCAGGACACATGGGAGTCCTGCAAACCTGGGGTCAGGGGAGCCCCAGCCTAGGCGCTATTCCCCAGG--------------------TGGCCTGGCGGTGAGAAGCCTGAGGCTCCTGGCTTGGCCTCCCCTCAGCCTGCCTGGCGCATGCA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21630527 459 - 159171411 CCTCAGGGACAGTCTGAGGCAGCCTGAGGCCTTTCCTGCAGGGACTCTGCTCCATTTACTCCTGGACCTACTGCCTGAGAGCCAGGCCCGA------GGCCTCCTCCTTCCACGTCCCAGCCAGGGCCCCCTCAGGCAGGGCACAGCG----GAGAGGGAGTGTGAGTGTACTTTTCGCTGGGGAGTTGAATTCAGCCTCTGGGTGGGTGTCCAGTGTCAGACCCCGAAATCTGCCCCACAGCGGGGAGGCAGGTCCTGTGCTGCGGGGGCCACACTCAAAGCCACCCAAGGCCAGGCCGCCTGACAGAGGCTGAATGGGCAGGAAGCGCCGCAAGACACACCAGAGTCCCCCAGTCCTGGGGCCAGGGGAACCCCAGCCCAGGTTCAATGCCCCACG--------------GGGCATTGGCCTGGCTGTGAAAAGCCTGTGGCTCCTGGCTCGGCCTCCCCTGAGCCTGCCTGGCACACTCA i calJac3.chr5 M 327 C 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=846255.000000 s hg38.chrUn_GL000218v1 45161 420 + 161147 CTCCTGGGGA-CCCCAGCCCCTCCGGCCTCCTCTTCCCTGAGAATCCCGCACCAGAAAGTCCTCGCTAGGAAGTCCATGCCGTTCCTACAGCACAGGCCCCTGGGCCCCTGCTCCTTCCACC------TTCACCT-CCTCTCCCACCACAGCCCGCACCCTCACTCCAGCCACAGGAG----------------------------CCGGGGCTC--------------------------------CTCCTGGGCCATTCCCACCACGCTGCCCA-GGTCTCTCCAGCACAACCATGTGCCGGCCAGTGCCCTCCTCCTGGACCTGACCT-TCCCCGGTCCTGACCTCTCCCGTGGCCAGAACCCTCAGTCCATGCTGCTGTCACCACGGTGCGCCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCAGCCGGGAGACTTACCCCAACCCAGGCCGAGCCAGAACCTATTGCAGGTGGCCT s panTro4.chr2A 18575126 414 - 113622374 GTCCTGGGGACCCCCAGCCCCTCCGGCCTCCTCTTCTCTGAGAGCCCCCCACCAGAAAGTCCTCACT----AGTCC------TTCCTACAGCACAGGCCTCTGGGCCCCTGTTCTCTCCACC------TTCACCCACCTCTCCCACCACAGCCCACACCCTCACTCCAGCCACAGGAG----------------------------TCGGAGCTC--------------------------------CTCCTGGGCCATTCCCACCACCCCGCCCAGGGTCTCTCCAGCCCCACCATGTGCTGGCCAGTGCCCTCCTCCTGGACCTGACCT-CCCCGCGTCCTGACCTCTCCCGCGGCCAGAACCCTCAGTCCATGCTGCTGTCACCACGGTGCGCCTGGCCTGACACAGCCTCCTGATGGGGCTTTTGAGGACAGCAGCCCGGAGACTTACCCTAACCCAGGCCGAGTCAGAACCTGTGGCAGGCGGCCT i panTro4.chr2A C 0 C 0 s nomLeu3.chr1a 40760439 414 + 122973662 GTCCTGGGGACCCCCAGCCCCTCCGGCCGCCTCTTCCCTGAGTTCCCCCCACCAGAGAGTCCTCACTAGGAATTCCATTCCCCTCCTACAGCACAGGCCCCTGGGCCCCTGTCCTCTCCACC------TCCACCC-CCTCTGCCTCCATAGTCCGTGCC----CTCCAGCCACAGGAG----------------------------CCGAGGCTC--------------------------------CTCCTGGGCCATTCCCACCACCCTGCCCAGGGTCTCTCCAGCTCCACGGTGTGCCCGCCAGTGCCCTCCTCCTGGACCTGACTTCCCCCCGGTCTTGACCTATCCCACGGCCAGAACCCTCACTCCATGCTGCTGTCACCACGGTGCATCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCAGCCCGGAGACTTACCCCAACCCC-----AGCCAGAACCTGTGGCAGGTGACCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3860126 411 - 112192347 GTCCTGGGGACCCCCAGCCCCTCCGGCGTCCTCTTCCCTGAGA-CTCCCCACCAGAGAGTCCTCACTAGGAAGTCCATGTCCCTCCTACAGCACAGGCCCCTGGGCCCCTGTTCcctccacc------ttcaccc-tctctcccaccatagcccccaccctcactccGGCCACAGG----------------------------------GGCTC--------------------------------CTCCTGGGCCATTCCCAC----CCGCCCAGGGTCTGTCCATCCCCACCGTGTGGCCGCCAGTGTCCTCCCCCTGGACCTGACCT-CCCCCGATCCTGACCTCTCCCGCGGCCAGAACCCTCACTCCATGCTGTGGTCACCGCGGTGTGCCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCGTCCCAGAGACTTACCCCAACCCAGGCCGAGCCAGAACCTGTGGCAGGCGGCCT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3941702 410 - 112612857 GTCCTGGGGACCCCCAGCCCCTCCGGCGTCCTCTTCCCTGAGA-CTCCCCACCAGAGAGTCCTCACTAGGAAGTCCATGTCCCTCCTACAGCACAGGCCCCTGGGCCCCTGTTCCCTCCACC------TTCACCC-TCTCTCCCACCATAGCCCCCACCCTCACTCCGGCCACAGG----------------------------------GGCTC--------------------------------CTCCTGGGCCATTCCCAC----CCGCCCAGGGTCTGTCCATCCCCACCGTGTGCCCGCCAGTGTCCTCCCCCTGGACCTGACCT--CCCCGATCCTGACCTCTCCCGCGGCCAGAACCCTCACTCCATGCTGTGGTCACCGCGGTGCGCCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCGTCCCAGAGACTTACCCCAACCCAGGCCGAGCCAGAACCTGTGGCAGGCGGCCT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3739256 411 - 107442819 GTCCTGGGGACCCCCAGCCCCTCCGGCCTCCTCTTCCCTGAGA-CTCCCCACCAGAGAGTCCTCACTAGGAAGTCCATGCCCCTCCTACAGCACAGGCCCCTGGGCCCCTGTTCCCTCCACC------TTCACCC-TCTCTCCCACCATAGCCCCCACCCTCACTCCGGCCACAGG----------------------------------GGCTC--------------------------------CTCCTGGGCCATTCCCAC----CCACCCAGGGTCTGTCCATCCCCACCGTGTGCCCGCCAGTGTCCTCCCCCTGGACCTGACCT-CCCCCGATCCTGACCTCTCCCGCGGCCAGAACCCTCACTCCATGCTGTGGTCACCGCGCTGCGCCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCGTCCCAGAGACTTACCCCAACCCAGGCCGAGCCAGAACCTGTGGCAGGCGGCCT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108542389 411 + 108555830 GTCCTGGGGACCCCCAGCCCCTCCAGCCTCCTCTTCCCTGAGA-CTCCCCACCAGAGAGTCCTCACTAGGAAGTCCATGCCCCTCCTACAGCACAGGCCCCTGGGCCCCTGTTccctccacc------ttcaccc-tctctcccaccatagcccccaccctcacTCCAGCCACAGG----------------------------------GGCTC--------------------------------CTCCTGGGCCATTCCCAC----CCACCCAGGGTCTGTCCAGCCCCACCGTGTGCCCACCAGTGTCCTCCCCCTGGACCTGACCT-CCCCCGATCCTGACCTCTCCCGCGGCCAGAACCCTCACTCCATGCTGTGGTCACCGCGGTGCGCCTGGCCTGACACAGCCTCCTGATGGGGC-TTTGAGGACAGCATCCCAGAGACTTACCCCAACCCAGGCCGAGCCAGAACCTGTGGCAGGCAGCCT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21630986 487 - 159171411 GTCCTAGGGACCCCCAGTCCCACAAGCCCCAGCTTCCTTGGGAACCCCCCACCCCAGAGTCCTCACCAGGAAGTCCATGACCCTCCTATAGCAGAGCCCCCTGGG-CCCTGCCCCCTCCACCTCCACTTCCACCT-CCTCTCCCACCATAGCCCCTGCCCGCACATCAGCCACAGGTGGTGGGTGGGCCACTCCCACTACCACACCCAGGGTCTCCCTAGTCCCCACTGCACCCCTACCTTATCCCGCTCCTGGGACACTCCCACCACCCAGCCCAGCGTCTCTCCAGCCCCACCATGTATCTATCAGTGCCCTCCTCCTGGACCTGACCT-CCCAGGGCCCTGACCTCTCCTGCCACCAGAACCCTGACTCCATGCTCCTGTCACCACAGTGCGCCTGGCCTGACACAGCCTTCTGATGGGGC-TTTGAGGACAGCAGCCCTGAGATTTAGCCCAACCCAGGCTGAGCCAGAACCTGTGGTATGCGGCCT i calJac3.chr5 C 0 C 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I e ponAbe2.chrUn 11813451 525 + 72422247 I a score=3728988.000000 s hg38.chrUn_GL000218v1 45581 1337 + 161147 GGGAACCTCTTCTCACTGTC---CGTCAAGATTGGGAGGCCAGCGGACCTTCAGGGACTGGTGTGGTCTGAGAAACATCCTTGAGCCTCGCCATGACTCAGTTTCCCCAGATGGCAGCAGGCTGGAGCCCATGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTAGGCATAGCAGAGCAGAGTTCCCTGTTTCTGT-CCCTGATCTGCAGCCCCAGGAGCCCGAGAGACCACCTAAGCCAAGGAGAAGGCCTCTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAAGTGCCCTGAAGTCGTTGGCAGGGGGTGCTGCCTACTTGGGGCTCCCAGACTAAGGGAACAC--ATTCACCTGGTGACCACAATAGGCCCTGCAGGCTGAGGCACAGGATTTAATCAAGGACGCATCAGAGTTAGGGGACTGGGCCCTGACTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACACCCTGAAGGACACTCCAGTGTGCTCCCACCTCTGGGTTCTGCCAGCCAGAGAGTGGGACTCTCAGGCC---------ACATGTG------TCTTGCTGGATCTCAGCTTCAGGGA--CCCAGGGTGCTGGCAGCTCTCTGAGACCTGGGTCAGGGGGTGTCCATTAGAGCACCTTGGTCAGGACCCAGAGATAGGGAGGGCAGGGCTAAGAGCACCCCAGGCAGTTGGCATCTCCAGAAAGCAGGAGGTAGGGCATGGCTCTGTGACAGATGTCTC-ATGACAGGGGGGA-TTGGAGGGACAGAGGGACGTGCTCAGGGGCTGAGGGGCAGACGAGGCTACCAAAGGGCACCTTGGACACTGGATGGCCGCAGGAAGGCCCCTGAACCCCATCCTGATTGATCCAGGGCCAGTGACCTTGGCCCAGACTGCAGGCCTGGGGACTCAGGTTCCtttagtttcttaagaaactactatactactttttggcatagctgtacgattttacattcccaccagtcatgtgtgaaagctccagtttttactcatgctccccagagtttgatgtttta-tttttattttagctattctgatatatatgt----------------------------------gttagtcattgtggtcttaatttgcaaatttctaatgactaatgatatttaacatcttttcctgttcataattaaataccatctgtattccttttcaCATATCATTAGCACAAATGTGAAATATCAGAACAAAA----TTTTTCACACAACTTCAAAATTTTTAGAGCAATACTCAAGGGAAAAGGTGTTTATTTAGAACAATGAAAACAATGAGACATTAACTT s panTro4.chr2A 18575540 1318 - 113622374 GGGAACCTCTTCTTACTGTC---CATCAAAATTGGGAGGTCAGGGGACCTTCAGGGACTGGTGTGGTCTGAGAAACATCCTTGAGCCTCGCCATGACTCAGTTTCCCCAGATGGCAGCAGGCTGGAGCCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTTTAGGCAGAGCAGAGCAGAGCTGCCCGTGTTTGTCCCCTGATGTGTGGCCCCAGGAGCCCGAGAGACCACCTGAGCCAACGAGAAGGCCTCTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAGATGCCCTGAAGTCGTTGGCAGGGGGTGCTGCCTGCTTGGGGCTCCCAGACTAAGGGAACAC--ATTCACGTGGTGACCACGATAGGCCCTGCAGGCTGAGGCACAGGATTTGACCAAGGACGCATCAGAGATAGGAGACTGGGCCCTCACTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGATGCCCTGAAGGACACTCCAGTGTGCTCCCACCTCTGGGTTCTGCCAGCCAGAGAGTGGGACCCTCAGGCC---------ACATGTG------TCTTGCTGGATCTCAGCTTTAGGGA--CCCAGCGTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTGTCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAG---------------------GGCAGTTGGCATCTCCAGAAAGCAGGAGGTGGGGCATGGCTCTGTGACAGATGTCCCTGTGACAGGGAGGA-TTGGAGGGACAGAGGGGCGTGCTCAGGGGCTGAGGGGCAGATGAGGCCACCAAAGGGCACCTTGGACACTGGATGGCCCCAGGAAGGCCCTTGAACCCCATCCTGATTGATCCAGGGCCTGTGACCTTGGCCCAGACTGCAGGCCTGGGGACTTGGGTTCCtttagtttcttgagaaactactatactcctttttggcatagctgtacgattttacattcccaccagtaatgtgtgaaagctctagttttgactcatgctcctcagcgtttgatgtttta-tttttattttagctattctgatatatatgt----------------------------------gttagtcattgtggtcttaatttgcaaatttctaatgactaatgatatttaacaccttttcttgttcataattaaataccatctgtattccttttcgCATATCATCAACACAACCGTGAAAAATCAGAAAAAGA----TTTTTCAGACGACTTCAAAATTTTTAGAACAATACTCAAGGGAAAAGGTGTTTATTTAGAACAATGAAAACAATGAGACATTAACTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11813976 1334 + 72422247 GGGAACCTCTTCTAACTGTC---CGTCAGGATTGGGAGGTCAGGGGACCTTCAGGGACTGGTGTGGTCTGAGAAACATCCTCGAGCCTCGCCATGACTCAGTTTCCCCAGATGGCAGCAGGCTGGAGTCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTAG-----GCAGAGCAGAGCTGCCCGTGTTTGTCCCCTGATCTGCAGCCCCAGGAGCCCGAGAGACCACCTGAGCCAAGGAGAAGGCCTCTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCAGTTCCAGGTGCCCTGAAGTCGTTGGCAGGGGGTGCTGCCTGCTTGGGGCTCCTAGACTAAGGGAACAC--ACTCACGTGGTGACTGCAATAGGCCCTGCAGGCTGGGGGACAGGATTTGACCAAGGACGCATCAGAGATAGGAGACTGGGTCCTCACTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAAACGCCCTGAAGGACACTCCAATGTGCTCCCACCTCTGGGTTCTGCCAGCCAGAGAGTGGGACCCTCAGGCC---------ACATGTG------TCTTGCTGGATCTCAGCCTCAGGGA--CCCAGCGTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTGTCCATTAGAGCACCTTGGTCAGGACCCGGAGATGGGGAGGGCAGGGCTAAGAGCACCCTGGGCAGTTGGCATCTCCAGAAAGCAGGAGGTGGGGCAGGGCTCTGAGACAGATGTCCCTGTGACAGGGAGGA-TTGGAGGGATAGAGGGGCGTGCTCAGGGGCTGAGGGGCAGATGAGGCCACCAAAGGGCACCTTGGACACTGGATGGCCCCAGGAAGTCCCCTGAACCCCATCCTGATTGATCCAGGGCCAGCGACCTTGGCCCAGACTGCAGGCCTGGGGACTCGGGTTCCtttagtttcttaagaaactactgtactcctttttggcatagctgtacgattttacattcccaccagtaatgtgtgaaagctccagtttttactcatgctcctcagcgtttgatgtttta-tttttattttagccattctgatatatatgt----------------------------------gttagtcattgtggtcttaatttacaaatttctaatgactaatgatatttaacatcttttcttgttcatagttaaataccatctgtattccttttcaCGTATCATTAGCACAACCGTGAAAAATCAGAACAAAA----TTTTTCACACGACTTCAAAATTTTTAGAACAATACTCAAGGGAAAAGGTGTTTATTTAGAACAGTGAAAACAATGAGACATTAACTT i ponAbe2.chrUn I 525 C 0 s nomLeu3.chr1a 40760853 1348 + 122973662 AGGAACCTCTTCTCACTGTC---TGTCAAGATTGGGAGGTCAGGGGACCTCCAGGGGCTGGTGTGGTCTGAGAAACATCCTCGAGCCTTGCTGTGACTCAGTTTCCCCAGATGGCAGCAGGCTGCAGCCCACGCAGGGCAGCATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATCCACTGGGCACCTCTC--TAGGCAGAGCAGAGCAGAGCTGCCTGTGTTTGTCTCCTGATCTGCAGCCCCAGGAGCCCGAGGGACCACCTGAGCCCAGGAGAAGGCCTCTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAGGTGCACTGAATTCGTTGGCA-GGGGTGCTGCCTGCTTGGGGCTCCCAGACTAAGGGAACATAGATTCACCTGGTGACTGCAGTAGGCCCTGCAGGCTGAGGCACAGGATTTGACCAAGGATGGATCAGAGATAGGAGACTGGGCCCTTACTCCTGTCAGCTGCAAACT-CCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACACCCTGAAGGACACTCCAGTGTGCTCCCACCTATGGGTTCTGCCAGCCAGAGAGTGGGACCCTCAGGCCTATCCCACGGCCTGAGGGATCCCCTTGTGGGATCTCAGCTTCAGGGA-CCCCAGGTTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTGTCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGATCAGCCG-GGCAGTCGGCATCTCCAGAAAGCAAGAGGTGGGGCATGGCTCTGTGACAGATGTCCCTGTGACAGGGACGA-TTGAAGGGGCAGAGGGGCGTGCTCAGGGGCTGAGGGGCAGACGAGGCCACCAAAGGGCACCTTGGATACTGGATGGCCCCAGGAAGGCCCCTGAACCCCATCCTGATTGATCCGGGGCCAGTGACCTTGGCCCAGACTGCAGGCCTGGGGACTCGGGTTCCtttagtttcttaagaagctactatactcctttttggcatagttgtacaattttacattcccgccagtaatgtgtgaaagctccagtttttactcatgctcctcagcatttgatgttttattttttattttagccattctgatatacatgt----------------------------------gttagtcattgtggtcttaatttgcaaatttctaatgactaatgatatttaacatcttttcctgttcataattagataccgtctgtattccttttcaCATATCATTAGCACAACCATGAAAAATCAGAACAAAA----TTTTTC-----ACTTAAAAATTTTTAGAACAATACTCAAGGGAAAAGGTGTTTATTTAGAACAATGAAAACAATGAGACATTAACTT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3860537 1324 - 112192347 GGGAACCTCTTCTCACTATCCGTCGTCAAGATTGGGAGGTCAGGGGAACCTCAGGGGCTGGAGTGGTCTGAGAAACAACCTCGAGCCTCACTGTGACTCAGTTTCCCCAGGCGGCAGCAGGCTGGAGCCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTAG-----GCAGAGCAGAGCTGCCCATGTTTGTTCCCTGATCTGCAG-CCCAGGAACCCGAGAGACCACCTGAGCCAAGGAGAAGGCCTGTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAGGTGCCCTGAAGTCGTTGGCAGGGGGCGCTGCCTGCCTGGGGCTCCCAGACTGAGGGAACACAGATTCACCTGGTGACCGCAATAGGCCCTGCAGGCTGAGGGACAGGACTTGACCAAGGATGCATCAGAGATAGGAGACTGGGCCCTCGCTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACGCCCTGAAGGACACTCCAGTGTGCTCCCACCTCTGGGTTCTGCCAGCTGGAGAGTGGGAGCCTCAGGCC---------GCATGTG------TCTTGCTGGGTCTCAGCTTCAGGGGACCCCAGGGTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTATCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGAGCACTCCGGGCAGTTGGCATCTCCAGAAAGCAGGAGGTGGGGCATGGCTGTGTGACAGATGTCCCTGTGACAGGGATGA-TTGGAGGGACAGAGGGGTGTGCTCAGGGGCTGAGGGGCAGACGAGGCCACCAAAGGGCACCTTGGACACTGGAGGGCCCCAGGAAGGCCCCTGGACCCCATTCTGATTGAT-CAGGGCCAGTGACCTTGGCCCAGACTGCGGGCCTGGGGACTCGGGTTCCtttagtttcttaagaaactactatactcctttttggcatagctgtacgattttacattctcaccagtaatgtgtgaaagctccagtttttactcatgctcctcagcgtttgatg------tttttattgtagccattctgatatatatat------------------------atatgtattaataagtcattgtggtctttatttgcaaatttctaatgactaatgatatttaacatctttttctgttcataattaaatgccatctgtattccttctcaCATATCACTAGCACAGGCATGAAAAATCAGAG------------------------CAAAATTTTTAGAACAATATTCAAGGGAAAAGGTGTTTATGTAGAACAATGAAAACAATGAGACGTTAACTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3942112 1324 - 112612857 GGGAACCTCTTCTCACTGTCCGTCGTCAGGATTGGGAGGTCAGGGGAACCTCAGGGGCTGGAGTGGTCTGAGAAACAACCTCGAGCCTCACTGTGACTCAGTTTCCCCAGGCGGCAGCAGGCTGGAGCCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTAG-----GCAGAGCAGAGCTGCCCATGTTTGTTCCCTGATCTGCAG-CCCAGGAACCCGAGAGACCACCTGAGCCAAGGAGAAGGCCTGTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAGGTGCCCTGAAGTCGTTGGCAGGGGGCGCTGCCTGCCTGGGGCTCCCAGACTGAGGGAACACAGATTCACCTGGTGACCGCAATAGGCCCTGCAGGCTGAGGGACAGGACTTGACCAAGGATGCATCAGAGATAGGAGACTGGGCCCTCGCTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACGCCCTGAAGGACACTCCAGTGTGCTCCCACCTCTGGGTTCTGCCAGCTGGAGAGTGGGAGCCTCAGGCC---------GCATGTG------TCTTGCTGGGTCTCAGCTTCAGGGGACCCCAGGGTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTATCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGAGCACTCCGGGCAGTTGGCATCTCCAGAAAGCAGGAGGTGGGGCATGGCTGTGTGACAGATGTCCCTGTGAAAGGGATGA-TTGGAGGGACAGAGGGGTGTGCTCAGGGGCTGAGGGGCAGACGAGGCCACCAAAGGGCACCTTGGACACTGGAGGGCCCCAGGAAGGCCCCTGGACCCCATTCTGATTGAT-CAGGGCCAGTGACCTTGGCCCAGACTGCGGGCCTGGGGACTCGGGTTCCtttagtttcttaagaaactactatactcctttttggcatagctgtacgattttacattcccaccagtaatgtgtgaaagctccagtttttactcatgctcctcagcgtttgatg------tttttattttagccattctgatatatatat------------------------atatgtattaataagtcattgtggtctttatttgcaaatttctaatgactaatgatatttaacatctttttctgttcataattaaatgccatctgtattccttctcaCATATCACTAGCACAGCCATGAAAAATCAGAG------------------------CAAAATTTTTAGAACAATATTCAAGGGAAAAGGTGTTTATTTAGAACAATGAAAACAATGAGACGTTAACTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3739667 1326 - 107442819 GGGAACCTCTTCTCACTATCCGTCGTCAAGATTGGGAGGTCAGGGGAACCTCAGGGGCTGGAGTGGTCTGAGAAACAACCTCGAGCCTCAccgtgactcagtttccccaggcGGCAGCAGGCTGGAGCCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTaggcagagcagagcagagctgcCCATGTTTGTTCCCTGACCTGCAG-CCCAGGAACCCGAGAGACCACCTGAGCCAAGGAGAAGGCCTGTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTGCAGGTGCCCTGAAGTCGTTGGCAGGGGGCGCTGCCTGCCTGGGGCTCCCAGACTGAGGGAACACAGATTCACCTGGTGACCGCAATAGGCCCTGCAGGCTGAGGGACAGGACTTGACCAAGGATGCATCAGAGATAGGACACTGGGCCCTCACTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACGCCCTGAGGGACACTCCACTGTGCTCCCACCTCTGGGTTCTGCCAGCCGGAGAGTGGCAGCCTCAGGCC---------GCATGTG------TCTTGCTGGGTCTCAGCTTCAGGGGACCCCAGGGTGCTGGCAGCTCCCTGAGACCTGGGTC--GGGGTATCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGAGCACCCCGGGCAGTTGGCATCTCCAGAAAGCAGGAGGTGGGGCGTGGCTGTGTGACAGATGTCCCTGTGACAGGGACGA-TTGGAGGGACAGAGGGGCGTGCTCAGGGGCTGAGGGGCAGACGAGGCCACCAAAGGGCACCTTGGACACTGGAGGGCCCCAGGAAGGCCCCTGGACCCCATTCTGATTGAT-CAGGGCCAGTGACCTTGGCCCAGACTGCGGGCCTGGGGACTC-GGTTCCTTTAGTTTCTTAAGAAACTACTGTACTCCTTTTTGGCATAGCTGTAcgattttccattcccaccagtaaCGTGTGAAAGCTCCAGTTTTTACTCATGCTCCTCAGCgtttgatg------cttttattttagccattctgagatatatat------------------------atatgtattaataagTCATTGTGGTCTTTATTTGCAAatttctaatgactaatgatatttaACATCTTTTTCTGTTCATAATTAAATGCCATCTGTATTCCTTCTCACATATCACTAGCACAGCCATGAAAAATCAGAG------------------------CAAAATTTTTAGAACAATATTCAAGGGAAAAGGTGTTTATTTagaacaatgaaaacaatgagaCGTTAACTC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108542800 1307 + 108555830 GGGAACCTCTTCTCACTATCCGTCGTCAAGATTGGGAGGTCAGGGGAACCTCAGGGGCTGGAGTGGTCTGAGAAACAACCTCGAGCCTCACTGTGACTCAGTTTCCCCAGGTGGCAGCAGGCTGGAGCCCACGCAGGGCAGGATGCCAGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACCTCTCTGTAGGCAGAGCAGAGCATAGCTGCCCATGTTTGTTCCCTGATCTGCAG-CCCAGGAACCCGAGAGACCACCTGAGCCAAGGGGAAGGCCTGTGGGCCAGAGCCCAGCTCTGCGAAGTGGGAGACCTCTCAGCCTCCACTTCCAGGTGCCCTGAAGTCGTTGGCAGGGGGCGCTGCTTGCCTGGGGCTCCCAGACTAAGGGAACACAGATTCACCTGGTGACCGCAATAGGCCCTGCAGGCTGAGGGACAGGACTTGACCAAGGATGCATCAGAGATAGGAGACTGGACCCTCACTCCTGCCAGCTGCAAACTCCCAAAGCCCCCAGCCCTCTCATGGGGTGAAGACGCCCTGAAGGGCACTCCAGTGTGCTCCCACCTCTGGGTTCTGCTAGCCGGAGAGTGGTAGCCTCAGGCT---------GCATGTG------TCTTGCTGGGTCTCACCTTCAGGGGACCCCAGGGTGCTGGCAGCTCCCTGAGACCTGGGTCAGGGGGTATCCATTAGGGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGAGCATCCCGGGCAGCTGGCATCTCCAGAAAGCAGGAGGTGGGGCATGGCTCTGTGACAGATGTCCCTGTGACAGGGACGA-TTGGAGGGACAGAGGGGCGTGCTCAGGGGCTGAGGGGCAGATGAGGCCACCAAAGGGCACCTTGGACACTGGAGGGCCCCAGGAAGGCCCCTGGACCCCATTCTGATTGAT-CAGGGCCAGTGACCTTGGCCCAGACTGCGGGCCTGGGGACTTGGGTTCCttcagtttcttaagaaactactatactcctttttggcatagctgtacgattttacattcccaccagtaatgtgtgaaagctccagtttttatt----------------------------ttttattttagccattctgatatatatat------------------------atatgtattaataagtcattgtggtctttatttgcaaatttctaatgactaatgatatttaacatctttttctgttcataattaaatgccatctgtattccttctcACGTATCACTAGCACAGCCATGAAAAATCAGAG------------------------CAAAATTTTTAGAACAATACTCAAGGGAAAAGGTGTTTATTTAGAACAATGAAAACAATGAGACGATAACTC i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21631473 1338 - 159171411 GGGAATCTATTCTCACTGCC---TGACAAGATTGGG----------------AGGAGCTGATGTGGCCTGCGAAATGTCCTTGAGGTGTGTTGTGACTCAGTTTCCCCAGATGGCAGTAGGCTGTAACCCACACAGGATAAAATGCCTGGCTCCACCTTTTGTCTGGAACCTGCATTCACTGGGCACTGCCCTATAGGAAGAGCAGAGCAGAACTGCCTGTGTTTGTTTCCTGACCTGCAGCCCCAGGAACCTGAGGGATCACCTGAGCCAAGAAGGAGAACTCTGGGCCTGACCCCAGCTCTG-GAAATGGGCGACCTCTCAGCCTTCGATTCCAAGTGCCCTGAAGTCATCAGCA-CGGGTGCTGCCTGCTTGGAGATCCCAGGCTAAGGGGACGCAGATTCACCTGGTGACCGCAGTTGGCTCTGCAGGCTGACCAACAGGATTTGACCAAGCACCCATCAGAGATGGGAGAGTGGGCCCTCGCCCCTGCCAGCTGCAAACTCCCAAAG-CCCTAGCTCTCTCATGGGGTGAAGATAACCTGAAGGACACTCCAGTGTGCTCTCACCTCTGGGGCCTGCCAGCCAAAGAGTGGGACCCTCAGGCT---------ACATATG------TCTTGCTTGGTTTCAGCTTCAGGGA-CCCCAGGGTGCTGGCAGCTCCCTGAGACCTGGGTC-GGGGGTGTCCATTAGAGCACCTTGGTCAGGACCCAGAGATGGGGAGGGCAGGGCTAAGAGAACCCCGGGCAGTCGGCATCTCCAAAAAGCAGGGGGTGGAGCATGGCTCTATGATGGCTGTCCCTGTGACAGGGACAAGTCGGGGGGGCAGGGCAG-------AGGGTCTCAGGGGCAGACAAGGCCATCAAAGGGCACCTTGGACACTGGATGACCCTGGGAAGGCCCGTGAACCCCATCCGGATTCACCCAGGGCCAGAGACCTTGGTTTACCCTGCAGGCCTGGGGACTCGGG----------TACTtaggaaactactgtactc--ttttggcatagctgtatgattttaccttcccaccaataatatgtgaaatctccagtttttactcgtgctcatcagcgtttgatgtttta-ttattattttggccattctgatatatatgtattaatacatatgtatgcattaatatatatattaataagccatt---gtcttaatttgcaaattgctaatgactaatgatattgaacattctttcctgttcataattaactaccatctgtattccttttcaCATATCATTAGCCCAACCATGAAAAAGCAAAGCAAAACATGTTTTTAACCTGTCTGTACAATTTTTAGA-CAATATTCAAAGGAAAAGGTGTTTAATTAGAACAATGAAAACAATGAGACATTAACTT i calJac3.chr5 C 0 C 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=-540.000000 s hg38.chrUn_GL000218v1 46918 1 + 161147 -C s panTro4.chr2A 18576858 1 - 113622374 -C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815310 1 + 72422247 -C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762201 1 + 122973662 -C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3861861 1 - 112192347 -C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943436 1 - 112612857 -C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3740993 1 - 107442819 -C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544107 1 + 108555830 -C i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21632811 1 - 159171411 -C i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773319 1 + 842509 G- i tarSyr2.KE939781v1 N 0 I 71 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=206876.000000 s hg38.chrUn_GL000218v1 46919 72 + 161147 CAGCTTAAATAAAGTTGATTGTGTGCATAAAAATGGTGAAAATATTGGACTTTCTTGGCAAAAGAAGAAAGG s panTro4.chr2A 18576859 68 - 113622374 CAGGTTAAATAAAGTTGATTGTGTGCATAAAAATGGTGAAAATATTGGACTTCCTTGGCAAAAG----AAGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815311 72 + 72422247 CAGCTTAAATAAAGTTGATTGTGTGCATAAAAATGGTGAAAATATTGGACTTCCTTGGCAAAAGAAGAAAGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762202 72 + 122973662 CAGCTTAAATAAAATTGATTGTGTGCATAAAAATGGTGAAAATGTTGGACTTCCTTGGCAAAAGAAGAAAGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3861862 72 - 112192347 CAGCTTAAATAAAATTGATTGTGTCTATAAAAATGGTGAAAATATTGTACTTCCTTGGCAAAAGAAGAAAGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943437 72 - 112612857 CAGCTTAAATAAAATTGATTGTGTCTATAAAAATGGTGAAAATATTGTACTTCCTTGGCAAAAGAAGAAAGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3740994 72 - 107442819 CAGCTTAAATAAAATTGATTGTGTCtataaaaatggtgaaaatattGTACTTCCTTGgcaaaagaagaaagg i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544108 72 + 108555830 TAGCTTAAATAAAATTGATCATGTCTATAAAAATGGTGAAAATATTGTACTTCCTTGGCAAAAGAAGAAAGG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21632812 72 - 159171411 CAGCTTAAACAGAATTGATCGTGTGCACAAAAATGGTCAACATATTGGACTTCCTTGGCAACAGAAGAAAGG i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 773320 71 + 842509 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=7821.000000 s hg38.chrUn_GL000218v1 46991 2 + 161147 GG s panTro4.chr2A 18576927 2 - 113622374 GG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815383 2 + 72422247 GG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762274 2 + 122973662 GG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3861934 2 - 112192347 GG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943509 2 - 112612857 GG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741066 2 - 107442819 gg i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544180 2 + 108555830 AG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21632884 2 - 159171411 GG i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773391 2 + 842509 GG i tarSyr2.KE939781v1 I 71 I 159 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=436809.000000 s hg38.chrUn_GL000218v1 46993 157 + 161147 AAGACTTTATATTTTCTGACGTAATATTCATCATTTGTCTTTGGTTTG--------TGTATTATGTGTATGATTTTGAAAAAATGCATCAAAGATATAACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGTTGGCACATGTTTCTGTATAAAA s panTro4.chr2A 18576929 151 - 113622374 AAGACTTTATATTTTCTGAAATAATATTCATCATTTGTCTTTGGTT------------TATTATGTGTATGATTTAGAAAAAATGCATCAAAGATACAACCTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGTTGGCAC--GTTTCTGTATAAAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815385 153 + 72422247 AAGACTTTATATTTTCTGAAATAATATTCATCATTTGTCTTTGGTT------------TATTATGTGTATGATTTTGAAAAAATGCATCAAAGATATAACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGTTGGCACATGTTTCTGTATAAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762276 157 + 122973662 AAGACTTTATATTTTCTGAAATAGTATTCATCATTTGTCTTTGGTTTG--------TTTATTATATGTATGATTTTGAGAAAATGCATCAAAGATATAACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGTTGGCACATGTTTCTGTATAAAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3861936 157 - 112192347 AATACTTTATATTCTCTGAAATAGTATTCATCATTTGTCTTTGGTTTG--------TTTATTATGTGTATGATTTTGAAAAACTGCATCAAAGATGTGACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGCTGGCACATGTTTCTGTATAAAA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943511 157 - 112612857 AATACTTTATATTCTCTGAAATAGTATTCATCATTTGTCTTTGGTTTG--------TTTATTATGTGTATGATTTTGAAAAACTGCATCAAAGATGTGACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGCTGGCACATGTTTCTGTATAAAA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741068 157 - 107442819 aataCTTTATATTCTCTGAAATAGTATTCATCATTTGTCTTTGGTTTG--------TTTATTATGTGTATGATTTTGAAAAACTGCATCAAAGATGTAACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGCTGGCACATGTTTCTGTATAAAA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544182 155 + 108555830 ATTACTTCATATTCTCTGAAATAGTATTCATCATTTGTCTTTGGTTTG--------TTTATTACGTGTATGATTTTGAAAAAATACATCAACGATGTAACTTTCCAGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGCTAGCAC--GTTTCTGTATAAAA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21632886 163 - 159171411 AAGACT--ATATTCTCCGAAACAGTGTTCATCCTTCGTCTTTGGTTTGACTGTTTATTTCTTATGTGTATGACTTTGAAGAAATACATCAAAGATAGAACTTTCTGGTGTTTGCTTTGATATTATCCTTGCAAACAGAAAAGTTAGCATGCATTTCTGTGTAAAA i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 773393 159 + 842509 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=17595.000000 s hg38.chrUn_GL000218v1 47150 4 + 161147 CTGG s panTro4.chr2A 18577080 4 - 113622374 CTGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815538 4 + 72422247 CTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762433 4 + 122973662 CTGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3862093 4 - 112192347 CTGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943668 4 - 112612857 CTGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741225 4 - 107442819 CTGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544337 4 + 108555830 CTGG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21633049 4 - 159171411 CTGG i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773552 4 + 842509 CTGG i tarSyr2.KE939781v1 I 159 I 165 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=425874.000000 s hg38.chrUn_GL000218v1 47154 161 + 161147 TCAAAGTTGGCCTAGGAAT---------------------------------------GATCTTACATTGTACTTTCACTTTACATC-ATACTGTAAGAGTTTAATAATAGCTAAGGCATCAGCATTGATGTGGACTTATTATACCTATTCAAGAGGT----GGTGTGAGGTTTAGGAGAGTTATGTGCCCTTTATCATAAAACA s panTro4.chr2A 18577084 161 - 113622374 ACAAAGTTGGCCTAGGAAT---------------------------------------GATGTTACATTGTACTTTCACTTTACATC-ATACTGTAAGAGTTTAATAATAGCTAAGGCAGGCGTGTTGATGTGGACTTACTGTCCCTATTTAAGAGGT----GGTGTGAGGTTTAGGAGAGTTATGTACCCTTTATCATAAAACA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815542 161 + 72422247 TCAAAGTTGGCCTAGGAAT---------------------------------------GATGTTACATTGTACTTTCACTTTACATC-ATACTGTAAGAGTTTAATAATAGCTTAGGCATCAGCATTGATATGGACTTATTGTCCCTATTTAAGAGGT----GGTGTGAGGTTTAGGAGAGTTATGTACCCTTTATCATAAAACA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762437 161 + 122973662 TCAAAGTTAGCCTAGGAAT---------------------------------------GATACTACATTGTACTTTCACTTTACATC-GTACTGTAAGAGTTTAATAATAGCTAAGGCATCAGCATTCATGTGGACTTATTATTCCTATTTAAGAGCT----GGTGTGAGGTTTAGGACAGTTATGTGTTCTTTATCATAAAACA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3862097 160 - 112192347 TCAAAGTTGGCCTAGGAGT---------------------------------------GTTATTACATTGTACTTTCACTTTACATC-ATACTGTAAGAGTTTAACAATAGCTGAGGCATCAGCATTGATGTGGACTTATTATCCCTATTTAAGAGTT----GGTGTGAGGTTTAGGAGAGTTATGTGCTC-TTATCATAAAAGA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943672 199 - 112612857 TCAAAGTTGGCCTAGGACTttggttattacattggttattacattggttattacaatggttattacattgTACTTTCACTTTACATC-ATACTGTAAGAGTTTAACAATAGCTGAGGCATCAGCATTGATGTGGACTTATTATCCCTATTTAAGAGTT----GGTGTGAGGTTTAGGAGAGTTATGTGCTC-TTATCATAAAAGA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741229 160 - 107442819 TCAAAGTTGGCCTAGGAGT---------------------------------------GTTATTACATTGTACTTTCACTTTACATC-ATACTGTAAGAGTTTAACAATAGCTAAGGCATCAGCATTGATGTGGACTTATTATCCCTATTTAAGAGTT----GGTGTAAGGTTTAGGAGAGTTATGTGctc-ttatcataaaata i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544341 161 + 108555830 TCGAAGTTGGCCTAGGAGT---------------------------------------GTTATTACATTGTACTTTCACTTTACATCTGTACTGTAAGAGTTTAACAATAGCTAAGGCATCAGCATTGATGTGGACCTATTATCCCTATTTAAGAGTT----GGTGTGAGGTTTAGGAGAGTTATGTGCTC-TTATCATAAAAGA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21633053 163 - 159171411 TCAAAGATGGCCTAGGAAT---------------------------------------GAGATTACATTCTACTTTTACTTTACAAC-ATACTGTAAGTGTTTCGTAACAGTGAAGGCATTGGCACCGATGCGGACTTCTTATCCCTACTTAGGAGTTGGTGGGTGTGAGGCTTAGG--AGTTATGTGCTCATTATCATAAAACA i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 773556 165 + 842509 I e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=773315.000000 s hg38.chrUn_GL000218v1 47315 249 + 161147 AATCTATGAAGCATTTATATAAAAACCCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCGTCTGCTT--GATAGATTT----GTTCGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCCATGAAATATCACAGT---TGTACTCTTGACTATGTTTGAATCACAA-AAGACTTTAATCTGCACTCAGTTCTTGTAACTAAAATCTTCAGTTTTAATATGAATTTCACTTAAAGAACATCCCTAGAAATTTCAGAGAGAA---- s panTro4.chr2A 18577245 246 - 113622374 AATCTATGAAGCATTTATATAAAAACCCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCGTCTGCTT--GATAGATTT----GTTTGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCCATGAAATACCACAGT---TGTACTCTTGACTATGTTTAAATCACAACAAGACTTTAATCTGCACTCAGTTCTTCTAACTAAAATCTTCAGTTTGAATATTAATTTCACTTAAAGAACATCCCTAGAAATTTCAGAG-------- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815703 243 + 72422247 AATCTATGAAGCATTTACATAAAAACCCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCGTCTGCTT------GATTT----GTTTGCAGGTTACGGATAT-------TTTATTGCA-----TAACTTCAATGAAATATCACAGT---TGTACTCTTGACTATGTTTAAATCAC---AAGACTTTAATCTGCACTCAGTTCTTTTAACTAAAATCTTCAGGTTGAATATTAATTTCACTGAAAGAACATCCCTAGAAATTTCAGAGAGAA---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762598 244 + 122973662 AATCTATGAAGCATTTATATAAAAACCCAGTATTTCTGGTTTCAAATTCA------TGCCATCTGCTT--GATAGATTT----GTTTGCAAGTTAGAGACAT-------TTTATTGCA-----TAACTTCAATGAAATATCATAGT---CATGCTCTTGACTATGTTTAAATCACAAAAAGACTTTAATCTGCACTCAGTTCATTAAACTAAAATCTTCAGTTTGAATATTAATTTCACTTAAAGAACATCCCTAGAAATTTCAGAGAGAA---- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3862257 250 - 112192347 AATCTATAAAGCATCTATATAAAAACTCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCATCTGCTT--GATAGATTT--AAGTTGGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCAACGATATATCACAGT----GTACTCTTGACTATGTTTAAATCACAAAAAGCCTTTAATCTACACTCAGTTCTTTGAACTAAAATCTTCAGTTTGAATATGAATTTCACTT-AAGAACATCCCTAGAAATTTTAGAGAGAA---- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3943871 250 - 112612857 AATCTATAAAGCATCTATATAAAAACTCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCATCTGCTT--GATAGATTT--AAGTTGGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCAACGATATATCACAGT----GTACTCTTGACTATGTTTAAATCACAAAAAGCCTTTAATCTACACTCAGTTCTTTGAACTAAAATCGTCAGTTTGAATATGAATTTCACTT-AAGAACATCCCTAGAAATTTTAGAGAGAA---- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741389 251 - 107442819 aatctATGAAGCATCTATATAAAAACTCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCATCTGCTT--GATAGATTT--AAGTTTGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCAACGATATATCACAGT----GTACTCTTGACTATGTTTAAATCACAAAAAGCCTTTAATCTACACTCAGTTCTTTGAACTAAAATCTTCAGTTTGAATATGAATTTCACTTAAAGAACATCCCTAGAaattttagagagaa---- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544502 249 + 108555830 AACCTATGAAGCATCTATATAAAAACTCAGTATTTCTGGTTTCAAATTCAGTACTGTGCCATCTGCTT--GATAGATTT--CAGTTTGCAGGTTAGAGACAT-------TTTATTGCA-----TAACTTCAACG--ATATCACAGT----GTACTCTTGACTATGTTTAAATCACAAAAAGCCTTTAATCTACACTCAGTTCTTTGAACTAAAATCTTCAGTTTGAATATGAATTTCACTTAAAGAACATCCCTAGAAATTTTAGAGAGAA---- i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21633216 251 - 159171411 AATATATGACGCATTTATATGAAAACCCAGTATTTCTGGTTTCAAATTCAGGACTCTGCCCTTTGCTT--GAGATATTTTTAAGTTTGCAGGTTAGAGACAT-------TTTACTGTA------AACTTCAATGAAATATCACAGT---TGAACTCTTGACTATGTTGAAATCACAAAAAGACTTTAATCTGCACTCAGTTCTTTTAACTAAAATCTTCAGTTTGA--ATTAATTTCATTTGAAGAACATCCCTAGAAACTTTAGAGGGAA---- i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773721 272 + 842509 AGTCTAAGAAACATTTATAAAAAACTCCAGAATTTCGAGTTTAAAATTTAGTACTCTGCCTTCTGCCTCAAATGTATTG--AAGCTTGCAGTTTAGAGGCAGTAGAATATCTACTGCAGAAGATAACCTCAATAACATATCATAGTTGTTGTACTTCTTATTATGTCTAAAATACAAAGAAACTTTAATCTGTACTCGGTTCTTTTAACTAAGGGCTTCAG-TTGAATATTAACTTTATTTAAACAATATTCCCAGTAATTTTAGATAGAAAATT i tarSyr2.KE939781v1 I 165 C 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=8190.000000 s hg38.chrUn_GL000218v1 47564 2 + 161147 AA s ponAbe2.chrUn 11815946 2 + 72422247 AA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762842 2 + 122973662 AA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3862507 2 - 112192347 AA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3944121 2 - 112612857 AA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741640 2 - 107442819 aa i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544751 2 + 108555830 AA i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21633467 2 - 159171411 AA i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773993 2 + 842509 AA i tarSyr2.KE939781v1 C 0 C 0 s micMur1.scaffold_129208 427 2 - 1211 AA i micMur1.scaffold_129208 N 0 N 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I e panTro4.chr2A 18577491 0 - 113622374 C a score=2251580.000000 s hg38.chrUn_GL000218v1 47566 724 + 161147 AGACTTTACTTGCAGAATACAATCTGCATTTGCTTTGACAACTAGTTAGTTCACATATGTAAAACAAGTCTACCTGTCTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTG----TTAAAGCAATTAGAATGGCAGTGGATCATGGCACAATTTACCTTAAAAGCCATGAGCAGAATACATCACAAGCTATGATACAATGAATAGTCGTTAGGTTTAAAGTAGTATCCACATATAAAAACACAAAGCATATTTTAGCT-CTTTAAATGAAAGCTTCATTCAGTCAATATTGGTCTTCCTGTAGATGAATTTATG--------AAACAAAA---CCACAAAACATACAGCTTACCCGCTTCTCAAAACTCATTGCACAATAGGTTGAGGGACTTCTCTACACCAGGACCTATTATTAAAACCAGTAAGTCCTCAGTGAAAATCATTTATTTGCCCGGAGTGTCATCTGATGTGTCTGTTGTAGGCAGCTGTGGCAGTGGTGGGTGGTTTAGTGACACGGACCCTGCCCACGTCTGTCCGTCCATCAGTGGGCTAGTGTCTCTCTGGCTGCACCTGAGAAGGGTCTATAGGAGTTAACAGCATTAGCATGGGATTCAAAAGAA-ATCATCTTGGATTCAAACTTCCATTTCAGTATTCA-TTTCCAG-CTAAGTTTGTGTAGCATGCTTAATGTTTCTGAAGCTCAATTTTAGTAATGGTAAAG-TATATCTGCCT s panTro4.chr2A 18577491 722 - 113622374 AGACTTTACTTGCAGAATACAATTTGCATTTGCTTTGACAACTA-TTAGTTCACATATGTAAAATAAGT----CTGTCTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTGTTAATTAAAGCAATTAGAATGGCAGTGGATCATGGCACAATTTACCTTAAAAGCCATGAGCAGGCTACATCACAAGCTATGATACAATTAATAGTCATTAGGTTTAAAGTAGTTTCCGCATATAAAACCACAAAGCATATTTTAGCC-CTTTAAACAAAAGCTTCATTCAGTCAATACTGGTCTTCTTGTAGATGCATTTATG--------AAACAAAA---CCACAAAACATATAGCTTACCCGCTTCTCAAAACATGTTGCACTGTAGGTTGAGGGACTTCTCTACACCAGGACCTACTCTT--AACCAATAAGTCCTCAGTGAAAATTATGTATTTGCCTGGAGTCTCATCTGATGTGTCTGTTGTAGGCAGCTGTGGCAGTGGTGGGTGGTTTAGTGAGATGGACCCTGTCCACGTCTGTCCGTCCATCAGTGGGCTAGTGTGTCTCTGGCTGCACCTGAGAAGGGTCTATAGGAGTTAACGGCATTAGCATGGGATTCAAAATAA-ATCATCTTGGATTCAAAGTTCCATTTCAGTATTCA-TTTCCAG-CTAAGTTTGTGTAGCATGATTAATGTTTCTGAGGCTCAATTTTAGTAATGGTGAAGTTATATCTTCCT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11815948 729 + 72422247 AGACTTTACTTGCAGAATACAATCTGCATTTGCTTTGACAACTAGTTAGTTCACATATGTAAAATAAGTCTACCTGTCTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTGTTAATTAAAGCAGTTAGAATGGCAGTGGATCATGGCACAATTTACCTTAAAAGCCATGAGCAGAATACATCACAAGCTATGATACAATAAGTAGTCATTAGGTTTAAAGTAGTTTCCACATATAAAAACACAAAGCATATTTTAGCC-CTTTAAATGAAAGCTTCATTCAGTCAATATTGGTCTTCCTGTAGATGCATTTATG--------AAACAAAA---TCACAAAACATATAGCTTACCCGCTTCTCAAAACTTGTTGCACAGTAGGTTGAGAGACTTCTCTGCACCAGGACCTATTATTAAAACCAATAAGTCCACAGTGAAAATCATTTACTTGCCTGGAGTGTCATCTGATGTGTCTGTTGTAGGCAGCTGTGGCAGTGGTGGGTGGTTTACTGAGACGGACCCTGCCCACGTCTGTCCGTCCATCAGTGGCCTAGTGTCTCTCTGGCTGCACCTGAGAAGGGTCTATAGGAGTTAACGGCATTAGCATGGGATTCAAAATAA-ATCATCTTGGATTCAAGCTTCCATTTCAGTATTCA-TTCCCAG-CTAAGCTTGTGTAGCATGCTTAATGTTTCTGAGGCTCAATTTTAGTAATGGTAAAGTTATATCTGCCT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40762844 733 + 122973662 AGACTTTACTTGCAGAATATAATCTTCATTTGCTTTGACAACTAGTTAGTTCACATATGTAAAATAAGTCTACCTGTGTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTGTTAATTAAAGCAATTAGAATGGCAGTGGATCATGGCACATTTTACCTTAAAAGCCATGAGCAGAATACATCACAAGCTATGATACAATAAATAGTCATTAGGTTTAAAGTAGTTTCCACATATAAAAACACAAAGCATATTTTAGCC-CTTTAAATGAAAGCTTCATTCAGTCAATATTGGTCCTCCTGTAGATGCATTTGTG----AAACAAACAAAA---CCACAAAACATATGGCTTACCCGCTTCTCAAAACTTGATGCACAACAGACTGAGGAACTTCTCTACACCAGGACCTATTATTAAAATGAATAAGTCCTCAGTGAAAATCATTTATTTGCCTGGAGTCTCATCTGATGTGTCTGTTGTAGGAAGCTGTGGCAGTGGTGGGTGGTTTAGTGAGACGGACCCTGCCCACGTCTGTCCGTCCATCAGTGGGCTAGTGTCTCTCTGGCTGCACCTGAGAAGGGTCTATAGGAGTTAATGGCATTAGCATGGGATTCAAAATAA-ATCATCTTGGATTCAAACTTCCATTTCAGTATTCA-TTCCCAG-CTAAGTTTGTGTAGTATGCTTAATTTTCCTGAGGCTCAATTTTAGTAATGGTAAAGTTTTATCTGCCT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3862509 718 - 112192347 AGACTTTACTTGCAG-ATACAATCTGCATTTGCTTTGACAA----TTAGTTCACATATGTAAAATAAGTCTACCTGTCTGTATGCATAATTAAGATGTA-----AGTGTGGTAATGACTTGTTAATTAAAGCAATTAGAATGGTAGTAGATCATGGCACAATGCACCTTAAAAGCCTTGAACAGAATACATCACAAGCTATGATACAATAAATAGTCATTGGGTTGAAAGTAGTTTCCACATGTAAAAACACAAAGCATATTTTAGCC-CTTTAAATG---------TTCAGTCAATATTGGTCTTCTTGTAGATGCATTTATGAAGCAAACAAACAAAA---CCACAAAACATATAGCTTACCTGCTTCTCAAAACTTGTTGCACAAAGGATTGAGGGACTTCTCTACCCCAGGACCTATTATTAAAACCAGTAAGTCCGCAGTGAAAATCCTTTATTTGCCTGGAGTGTCATCTGATGTGTCTGTTGCAGGCAGCTGTGGCAGTGGTGGATGGTTCAGCGAGACGGAGCCTGCCCATGTCTGTCCATCCATCAGTGGGCTAGTGTCTCTCTGGCTGCACCTGAGCCTTCTCTACAGGAGTT-ATGGCATTAGCATCGTATTCAAAATAA-ATAATATTTGATTCAAACTTCCATTTCAGTATTCA-TTTTCTGACTAAGTTTGTGTAGCATGCTTAATTTTTCTGAGGCTCAATTTTAGTAACGGTAAAGTTATATCTGCTT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3944123 718 - 112612857 AGACTTTACTTGCAG-ATACAATCTGCATTTGCTTTGACAA----TTAGTTCACATATGTAAAATAAGTCTACCTGTCTGTATGCATGATTAAGATGTA-----AGTGTGGCAATGACTTGTTAATTAAAGCAATTAGAATGGTAGTAGATCATGGCACAATGCACCTTAAAAGCCGTGAACAGAATACATCACAAGCTATGATACAATAAATAGTCATTGGGTTGAAAGTAGTTTCCACATATAAAAACACAAAGCATATTTTAGCC-CTTTAAATG---------TTCAGTCAATATTGGTCTTCTTGTAGATGCATTTATGAAGCAAACAAACAAAA---CCACAAAACATATAGCTTACCTGCTTCTCAAAACTTGTTGCACAAAGGATTGAGGGACTTCTCTACCCCAGGACCTATTATTAAAACCAGTAAGTCCGCAGTGAAAATCCTTTATTTGCCTGGAGTGTCATCTGATGTGTCTGTTGCAGGCAGCTGTGGCAGTGGTGGATGGTTCAGCGAGACGGAGCCTGCCCATGTCTGTCCATCCATCAGTGGGCTAGTGTCTCTCTGGCTGCACCTGAGCCTTCTCTACAGGAGTT-ATGGCATTAGCATCGTATTCAAAATAA-ATAATATTTGATTCAAACTTCCATTTCAGTATTCA-TTTTCTGACTAAGTTTGTGTAGCATGCTTAATTTTTCTGAGGCTCAATTTTAGTAACGGTAAAGTTATATCTGCTT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3741642 723 - 107442819 agaCTTTACTTGCAG-ATACAATCTGCATTTGCTTTGACAA----TTAGTTCACATATGTAAAATAAGTCTACCTGTCTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTGTTAATTAAAGCAATTAGAATGGTAGTAGATCATGGCACAATGCACCTTAAAAGCCGTGAACAGAATACATCACAAGCTATGATACAATAAATAGTCATTGGGTTGAAAGTAGTTTccacatataaaaacacaaagcatATTTTAGCC-CTTTAAATG---------TTCAGTCAATATTGGTCTTCTTGTAGATGCatttatgaaacaaacaaacaaaa---ccacaaaacataTAGCTTACCTGCTTCTCAAAACTTGTTGCACAAAGGATTGAGGGACTTCTCTACCCCAGGACCTATTATTAAAACCAGTAAGTCTGCAGTGAAAATCCTTTATTTGCCTGGAGTGTCATCTGATGTGTCTGTTGCAGGCAGCTGTGGCAGTGGTGGATGGTTCAGCGAGACGGAGCCTGCCCACGTCTGTCCATCCATCAGTGGGCTAGTGTCTCTGTGGCTGTACCTGAGCCTTCTCTACAGCAGTT-ATGGCATTAGCATGGTAttcagaataa-ataatatttgattcAAACTTCCATTTCAGTATTCA-TTTTCTGACTAAGTTTGTGTAGCATGCTTAATTTTTCTGAGGCTCAATTTTAGTAATGGTAAAGTTATATCTGCTT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108544753 723 + 108555830 AGACTTTACTTGCAG-ATACAATCAGCATTTGCTTTGACAA----TTAGTTCACATATGTAAAATAAGTCTACCTGTCTGTATGCATAATTAAGATGTAACAGTAGTGTGGTAATGACTTGTTAATTAAAGCAATTAGAATGGTAGTAGATCATGGCACAATGCACCTTAAAAGCCTTGAACAGAATACATCACAAGCTATGATACAATAAATAGTCATTGGGTTGAAAGTAGTTTCCACATATAAAAACACAAAGCATATTTTAGCC-CTTTAAATG---------TTCAGTCAATATTGGTCTTCTTGTAGATGCATTTATGAAACAAACAAACAAAA---CCACAAAACATGTAGCTTACCTGCTTCTCAAAACTTGTTGCACAAAGGATTGAGGGACTTCTCTACCCCAGGACCTATTATTAAAACCAGTAAGTCCGCAGTGAAAATCCTTTATTTGCCTGGAGTGTCATCTGATGTGTCTGTTGCAGGCAGCTGTGGCAGTGGTGGATGGTTCAGCGAGACGGAGCCTGCCCACGTCTGTCCATCCATCAGTGGGCTAGTGTCTCTCTGGCTGCACCTGAGCCTTCTCTACAGGAGTT-ATGGCATTAGCATGGTATTCAAAATAA-ATAATATTTGACTCAAACTTCCATTTCAGTATTCA-TTTTCTGACTAAGTTTGTGTAGCATGCTTAATTTTTCTGAGGCTCAATTTTAGTAATGTTAAAGTTATATCTGCTT i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21633469 731 - 159171411 AGACTTTACTTGCAGAATACAATCTGCATTTGCTTTGACAACGG-TTAGTTCACATATGTAAGATAAGTCTACCTTTCTGTGTGCATAATTAAGACGTGACAGTAGCGTGGTAATGACCTCTTAATTAAAACAATTAGGATGGTAGTGGATCATGGTGCAATGTACCTTAAAAGCCATGAGCAGAACACATCACAAGCTATCATACAATAAATAGTCATTGGGTTTAAAGTAATTTCCACACAGAAAAACACAAAACATATTTTAGCC-CTTTAAATGAAAACTTCGTTCAACCAATATTGGTCTTCCTGTAGATGCATTTAGG--------AAACAAAAAACCCACAAAACATATAGTTTGCCTGCTTCTCAAAACTTGGTGCACAACTCATTGTGGGACTTTCATACACGAGGACCTATTATTAAAACAATTAATTCCCTGGTGAAAACCATTTATTCGTCTGGAGTGTCATCTGATGTGTCTGTTGTAGGAAGCTGTGGCAGTGGCGGGTGGTTCAGGGGGACAGATCCTGCCCACGTCAGTCTGTCCATCAGTGGGCTAGTGTCTGTCTGGCTGCACCTGAGAAGGGAATACAGGAGTT-ACAGCATTAGCACAGGCTTCAAAATAGCATAATCTTGGATTCAAAATTCCATTTTGGTATTTA-TTTCCAG-GTAAGTTTGTGTAGCATGCTTAATTTTTCTGAGGCTCAATTTTAGTTACGGTAAGCTTATATCTGCCC i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 773995 683 + 842509 AGCCATTGCTTGTAGAATATGATTTGTGTTTGCTTTGACAACTAATTAGTTTACATATGTAAAATAAGTCTATCTTTCTGTATGCATAACTAAGATGCAACATTAGTGTGGCATTGACTGTTTAATTAAAGCAATTAAGATAGGAGTGGATCATGGCATGATTTACCTTAAGAGGCATGATCAGAATGCATCACGGGCTATAAT------AATAGTCATTGAGTCTAAAGTACTTTC--CATTTAAAAACACAAAGCATATTTTAGCCGTTTTAAATTAAATTTTCATTTATTT-ATATTGACCTTCTTGTATATGCATTTAGA----AAAAAAGCAAAA------TGAAAATCATAACTTAC---CTTCTCAATACTTGGTGCACAATAGATTGAAGTATTTCCATATGCTACAACCTATTATT-ACACCAATGAATTACTGTTTTTTTGTTTTTGTTTTGGTCAAGCATCCTCGAAATTGCTTTTCTTAGGGATCCCTGGCTGTGGTCTGTGATTCAGGAAGATATACCCTGACCATGTCTCTTT-TTTATTAGAGAAC--------------------------------TACAAGAGTG-GAACTATTAGCATGAGTTTCGAAATAACATAATATTGAATTCAAATTCCAGTTTCAATATTCCTTTTTCTG-GTAAGTTTGTGTAGGATGTTAAGTTT---TGAAGTTCAATTTTAATAATGGTAAAATTATATGTTCCT i tarSyr2.KE939781v1 C 0 C 0 e rhiRox1.KN296879v1 1553952 5721 - 1560628 I a score=35258.000000 s hg38.chrUn_GL000218v1 48290 13 + 161147 -AAAAGACAGGGAC s panTro4.chr2A 18578213 13 - 113622374 -AAAAGACAGGGAC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816677 9 + 72422247 -AAA----AGGGAC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763577 13 + 122973662 -AAAAGACAGGGAC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863227 13 - 112192347 -AAAAGACAGGGGC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3944841 13 - 112612857 -AAAAGACAGGGGC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742365 13 - 107442819 -AAAAGACAGGGGC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545476 13 + 108555830 -AAAAGACAGGGGC i chlSab2.chr12 C 0 C 0 s rhiRox1.KN296879v1 1559673 13 - 1560628 -aaaaGACAGGGGC i rhiRox1.KN296879v1 I 5721 I 502 s calJac3.chr5 21634200 13 - 159171411 -AAAAGAcaagggc i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 774678 12 + 842509 TATTAATTTGGT-- i tarSyr2.KE939781v1 C 0 C 0 a score=58362.000000 s hg38.chrUn_GL000218v1 48303 16 + 161147 ACATCCCAGTTTTGTG s panTro4.chr2A 18578226 16 - 113622374 ACATCCCAGTTTTGTG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816686 16 + 72422247 ACGTCCCAGTTTGGTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763590 16 + 122973662 ACATCCCAGTTTTGTG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863240 16 - 112192347 ACATCCCAATTTTGTG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3944854 16 - 112612857 ACATCCCAATTTTGTG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742378 16 - 107442819 ACATCCCAATtttgtg i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545489 16 + 108555830 ACATCCCAATTTTGTG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21634213 16 - 159171411 acatcccagttttgtg i calJac3.chr5 C 0 I 1300 s tarSyr2.KE939781v1 774690 16 + 842509 AAATCCAAGTTTTGTG i tarSyr2.KE939781v1 C 0 C 0 e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=31491.000000 s hg38.chrUn_GL000218v1 48319 36 + 161147 -TTtttttatttttattttattgta-----tttttcttgaga s panTro4.chr2A 18578242 36 - 113622374 -ttttttaatttttattttgtttta-----tttttcttgaga i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816702 35 + 72422247 -Tttttttatttttatttt-tttta-----tttttcttgaga i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763606 41 + 122973662 -TTTTTTTGtttttattttattttattattttttttttgaga i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863256 21 - 112192347 -TGCAtttat--------------------tttttcttgaga i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3944870 21 - 112612857 -TGCAtttat--------------------tttttcttgaga i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742394 21 - 107442819 -tgcatttat--------------------tttttcttgaga i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545505 21 + 108555830 -TGCAtttat--------------------tttttcttgaga i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21635529 19 - 159171411 ---ttttttt--------------------ttttttttgaga i calJac3.chr5 I 1300 C 0 s tarSyr2.KE939781v1 774706 37 + 842509 AACCTTAAATGTTTACTTCTGTGAG-----TGCTTTTTAAGA i tarSyr2.KE939781v1 C 0 I 1288 e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=646428.000000 s hg38.chrUn_GL000218v1 48355 230 + 161147 cggagttttgctcttgctgcccaggctggagtgcaatggtgcaatctcggctcaccacaacctccgcctcctgggttcaagggactcttctgcttcagcattctgagtaaatggaattacaggtgcccgccaccacgcccagctaattttttgtatttttaatagagac-gggtttcaccatgttggccaggctggtcttgaacctctgacctcagatgatccacccacct s panTro4.chr2A 18578278 231 - 113622374 tggagttttgctcttgttgcccaggctggagtgcaatggcacaatcttggctcaccacaacctccgcctcctcggttcaagggattctcctgcttcagcatcctgagtagctgggattacaggtgcccggcaccatgcccagctaattttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcagatgatccacccgcct i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816737 231 + 72422247 cggagttttgctctttttgtccaggctggagtgcaatggtgcaatctcggctcaccacaacctccatctcctgggttcaagggattctcctgcttcagcctcctgagtagctgggattacaggtgcccgccaccacacccagttaattgtttgtatttttagtagagacaggttttcaccatgttggccaggctggtcttgaactcctgacctcagatgatccacccgcct i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763647 231 + 122973662 tggagttttgctcttgttgcccaggctggagtgcaatggtgcgatctcggctcaccacaacctccgcctcctgggttgaagggattctcctgtctcagcctcctgagtagctgggattacaggtgcccgccaccacgcctagctaatcttttgtatttttagtagagatggggtttcatcatgttggctaggctggtcttgaactcctgacctcagatgatccacccgcct i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863277 228 - 112192347 tggagttttgctcttgttacgcaggctggagtgcaatggcgtgatctcggctcaccacaacctccaccttccgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccacttccagctaattttttgtatttttagtagagatggggtttcgctatgttggccaggctggtcttgaa---ctgacctcagataatccacctgcct i rheMac3.chr15 C 0 I 12 s macFas5.chr15 3944891 228 - 112612857 tggagttttgctcttgttacgcaggctggagtgcaatggcgtgatctcggctcaccacaacctccaccttccgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccacttccagctaattttttgtatttttagtagagatggggtttcgctatgttggccaggctggtcttgaa---ctgacctcagataatccacctgcct i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742415 228 - 107442819 tggagttttgctcttgttacgcaggctggagtgcaatggcgtgatctcggctcaccacaacctccacctcccgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccaccaccacttccagctaattttttgtatttttagtagagatggggtttcgctatgttggccaggctggtcttgaa---ctgacctcagataatccacctgcct i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545526 228 + 108555830 tggagttttgctcttgttacgcaggctggagtgcaatggcgtgatctcggctcaccacaacctccacctcccgggttcaagggattctcctgcctcagcctcctgagtagctgggattacaggtgcccgccaccacttccagctaattttttgtattgttagtagagatggggtttcgctatgttggccagactggtcttgaa---ctgacctcagataatccacctgcct i chlSab2.chr12 C 0 I 12 s calJac3.chr5 21635548 229 - 159171411 cggagtttcactctcgtgacccgggctggagtgtgatggcgtgatctcggctcaccgcaacttcagtctcctgagttcaggcaattctcctgcctcagccttctgagtagctgggattaaaggcacgtgccaccatgcccagctaattttttgtatttttagtagagacagggtttcaccatgttgaccaggatggtctccatctcttgatctc--atgattcacccactt i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 774743 1288 + 842509 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=-2326.000000 s hg38.chrUn_GL000218v1 48585 17 + 161147 catatgataatcccgcc s panTro4.chr2A 18578509 10 - 113622374 c-------agccttcca i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816968 10 + 72422247 c-------agccttcca i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763878 10 + 122973662 c-------agcctttca i nomLeu3.chr1a C 0 C 0 s macFas5.chr15 3945119 11 - 112612857 -----agaggccttcc- i macFas5.chr15 C 0 I 1 s papAnu2.chr15 3742643 11 - 107442819 -----agaggccttcc- i papAnu2.chr15 C 0 I 1 s calJac3.chr5 21635777 10 - 159171411 -------tggcctccca i calJac3.chr5 C 0 C 0 e chlSab2.chr12 108545754 12 + 108555830 I e rheMac3.chr15 3863505 12 - 112192347 I e tarSyr2.KE939781v1 774743 1288 + 842509 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=34704.000000 s hg38.chrUn_GL000218v1 48602 10 + 161147 aagtgctggg s panTro4.chr2A 18578519 10 - 113622374 aagtgctggg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816978 10 + 72422247 aagtgctggg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763888 10 + 122973662 aagtgctggg i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863517 10 - 112192347 aagtgctggg i rheMac3.chr15 I 12 C 0 s macFas5.chr15 3945131 10 - 112612857 aagtgctggg i macFas5.chr15 I 1 C 0 s papAnu2.chr15 3742655 10 - 107442819 aagtgctggg i papAnu2.chr15 I 1 C 0 s chlSab2.chr12 108545766 10 + 108555830 aagtgctggg i chlSab2.chr12 I 12 C 0 s calJac3.chr5 21635787 10 - 159171411 aagtgctggg i calJac3.chr5 C 0 I 77 e tarSyr2.KE939781v1 774743 1288 + 842509 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=67990.000000 s hg38.chrUn_GL000218v1 48612 27 + 161147 attacaggtgtgagccaccatgtccgg s panTro4.chr2A 18578529 27 - 113622374 attacgggtgtgagccaccatgcccgg i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11816988 27 + 72422247 attacaggtgtgagccaccatgcccgg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763898 27 + 122973662 attacaggtgtgagccaccatgcccgg i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863527 27 - 112192347 attacaggtgtgagccaccatgcctgg i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3945141 27 - 112612857 attacaggtgtgagccaccatgcctgg i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742665 27 - 107442819 attacaggtgtgagccaccatgcctgg i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545776 27 + 108555830 attacaagtgtgagccaccatgcctgg i chlSab2.chr12 C 0 C 0 e calJac3.chr5 21635797 77 - 159171411 I e tarSyr2.KE939781v1 774743 1288 + 842509 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=10354.000000 s hg38.chrUn_GL000218v1 48639 4 + 161147 ccTT s panTro4.chr2A 18578556 4 - 113622374 ccTT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817015 4 + 72422247 ccTT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763925 4 + 122973662 ccTT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863554 4 - 112192347 ccTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3945168 4 - 112612857 ccTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742692 4 - 107442819 cctc i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545803 4 + 108555830 ccTC i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 776031 4 + 842509 CTTC i tarSyr2.KE939781v1 I 1288 C 0 e calJac3.chr5 21635797 77 - 159171411 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=98322.000000 s hg38.chrUn_GL000218v1 48643 34 + 161147 ATCCTCAAAAAAGAATTTATCAAAATtgtgtgtg s panTro4.chr2A 18578560 34 - 113622374 ATTCTCAAAAAAGAATTTATCAAAATTGTATGTA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817019 34 + 72422247 ATCCTCAAAAAAGAATTTATCAAAATTGTGTGTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763929 34 + 122973662 ATACTCAAAAAAGAATTTATCAAAATtgtgtgtg i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863558 34 - 112192347 ATCCTCAAAAAAGAATTTATCAAAATTTTGTGTA i rheMac3.chr15 C 0 I 4 s macFas5.chr15 3945172 34 - 112612857 ATCCTCAAAAAAGAATTTATCAAAATTTTGTGTA i macFas5.chr15 C 0 I 3 s papAnu2.chr15 3742696 34 - 107442819 atcctcaaaaaagaatgtttctaaattttgtgtg i papAnu2.chr15 C 0 I 3 s chlSab2.chr12 108545807 34 + 108555830 ATCCTCAAAAAAGAATGTTTCAAAATTTTGTGTG i chlSab2.chr12 C 0 I 10 s calJac3.chr5 21635874 33 - 159171411 ATCCTCAGCAAAGAATTTATCAAAATTGTGTGT- i calJac3.chr5 I 77 C 0 s tarSyr2.KE939781v1 776035 32 + 842509 ATCATCGACAAATGATTAATCAAAAATTTGTG-- i tarSyr2.KE939781v1 C 0 C 0 e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=-25621.000000 s hg38.chrUn_GL000218v1 48677 28 + 161147 --tgtgtgtgtgtgtg------tgtgtgtgtgtATG s panTro4.chr2A 18578594 16 - 113622374 --TATGTGTGTGTGAG------------------TG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817053 4 + 72422247 --TG------------------------------TG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763963 34 + 122973662 --tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863596 9 - 112192347 --TTTTTTTTT------------------------- i rheMac3.chr15 I 4 C 0 s macFas5.chr15 3945209 9 - 112612857 --TTTTTTTTT------------------------- i macFas5.chr15 I 3 C 0 s papAnu2.chr15 3742733 9 - 107442819 --ttttttttt------------------------- i papAnu2.chr15 I 3 C 0 s calJac3.chr5 21635907 3 - 159171411 --------TTT------------------------- i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 776067 9 + 842509 GTTTACTGT--------------------------- i tarSyr2.KE939781v1 C 0 C 0 e chlSab2.chr12 108545841 10 + 108555830 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=211534.000000 s hg38.chrUn_GL000218v1 48705 70 + 161147 -TTTTAAGTA---GAGTAATACTATATTAAAATGCCACTATATATGTTCTAACAAAAAACCTCAATTTAAC----AAA---- s panTro4.chr2A 18578610 70 - 113622374 -TTTTAAGTA---GAGTAACACTTTATTAAAATGCCACTATATATGTTCTAACAAAAAACCTCAATTTAAC----AAA---- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817057 73 + 72422247 -TTTTAAGTA---GAGTAACACTTTATTAAAATGCCACTATATATGTTCTAAC-AAAAATCTCAATTTAACAATTAAA---- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40763997 76 + 122973662 -tTTTAAGTAGAGGAGTAACACTTTATTAAAAAGCCACTATATATGTTCTAAC-AAAAACCTCAATTTAACAATTAAA---- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863605 76 - 112192347 -TTTAAAGTAGAGGAGTAACACTTTATTAAAATGCCACTATCTATGTTCTAAC-AAATACCTCAATTTCACAATTAAA---- i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3945218 76 - 112612857 -TTTAAAGTAGAGGAGTAACACTTTATTAAAATGCCACTATCTATGTTCTAAC-AAATACCTCAATTTCACAATTAAA---- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742742 73 - 107442819 -t---aagtagaggagTAACACTTTATTAAAATGCCACTATCTATGTTCTAAC-AAATACCTCAATTTCACAATTAAA---- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108545851 76 + 108555830 -TTTTAAGTAGAGGAATAACACTTTATTAAAATGCCACTATATATGATCTAAC-AAATACCTCAATTTCACAATTAAA---- i chlSab2.chr12 I 10 C 0 s calJac3.chr5 21635910 76 - 159171411 -TTTTAAGTAGAGGAGTAACACTGTATTAACATGCCACTATATATGTTCTAAC-AAAAACTTCAATTTAACAATTAAA---- i calJac3.chr5 C 0 C 0 s tarSyr2.KE939781v1 776076 77 + 842509 TTTTAAATTAGGGGAGTAATACTTTATTAAAATATCACTATACGTATTCTAACTATAAACA-----TTAACAATTAAATAAA i tarSyr2.KE939781v1 C 0 I 2433 e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=84181.000000 s hg38.chrUn_GL000218v1 48775 57 + 161147 TGTATGTGGGgagagggagaga------aggag--------------agagagagagaaggagggaggcaga------------gagag s panTro4.chr2A 18578680 55 - 113622374 TGCATGTGgggagagggagaga--------ggg--------------agggagagaggaggagggaggcaga------------gagag i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817130 63 + 72422247 TGTATGTGGGgagagggagagagacagggaggg--------------agggagagagaaggagggaggcaga------------gaggg i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40764073 77 + 122973662 TGTATGTGGGgagagggagagagagagagagggagagagggagggacagagagagagaaggagggaggcaga------------gagag i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863681 58 - 112192347 TGCATGTGGGgagagagagggagggagggagag--------------agaga-----caggacggaggtggg------------gagag i rheMac3.chr15 C 0 I 2 s macFas5.chr15 3945294 60 - 112612857 TGCATGTGGGgagagagagggagggagggagag--------------agaga-----caggacggaggtggg----------gagagag i macFas5.chr15 C 0 I 2 s papAnu2.chr15 3742815 63 - 107442819 TGTatgtggggagagagagggagggagggagag--------------agagagacagaaggagggaggtggg------------gagag i papAnu2.chr15 C 0 I 2 s chlSab2.chr12 108545927 75 + 108555830 TGGATGTGGGgagagagagggagggagggagag--------------agagagacagaaggagggagGTGGGGGgagagagagagagag i chlSab2.chr12 C 0 I 2 s calJac3.chr5 21635986 16 - 159171411 TGTATGTgcagagaga------------------------------------------------------------------------- i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I e rhiRox1.KN296879v1 1559686 502 - 1560628 I a score=7803.000000 s hg38.chrUn_GL000218v1 48832 7 + 161147 agag----aag s panTro4.chr2A 18578735 6 - 113622374 agag-----ag i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817193 7 + 72422247 agag----aag i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40764150 11 + 122973662 agagagagaaa i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863741 7 - 112192347 agag----aga i rheMac3.chr15 I 2 C 0 s macFas5.chr15 3945356 7 - 112612857 agag----aga i macFas5.chr15 I 2 C 0 s papAnu2.chr15 3742880 7 - 107442819 agag----aga i papAnu2.chr15 I 2 C 0 s chlSab2.chr12 108546004 7 + 108555830 agag----aga i chlSab2.chr12 I 2 C 0 s rhiRox1.KN296879v1 1560188 7 - 1560628 agag----aga i rhiRox1.KN296879v1 I 502 N 0 s calJac3.chr5 21636002 3 - 159171411 -aag------- i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=207194.000000 s hg38.chrUn_GL000218v1 48839 81 + 161147 agagagaTATGTATCTCTGGTGACTCTtcctttttggatgatgaccccagtcctaacagattacggccttacccttttgcc s panTro4.chr2A 18578741 71 - 113622374 a----------tatctctggtgtgtcttcctttttggatgacgaccccagtcctaacagattagggccttaaccttttgcc i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817200 79 + 72422247 agcgagaga--tatctctggtgtctcttcctttttggatgacgaccccagtcctaacagattagggccttacccttttgcc i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40764161 79 + 122973662 agagagaga--tatctctggtgtctcttccttttcggatgaagaccccagtcctaacagattagggcctcacccttttgcc i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863748 81 - 112192347 agagagaaaggtatctctggtgtctcctccttttcagatgaagaccccagtcctaacagattagggcctcacccttttgcc i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3945363 81 - 112612857 agagagaaaggtatctctggtgtctcttccttttcagatgaagaccccagtcctaacagattagggcctcacccttttgcc i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3742887 77 - 107442819 ----agaaagatatctctggtgtctcttccttttcAGATGAAGACCCCAGTCCTAACAGATTAGGGCCTCACCCTTTTGCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108546011 81 + 108555830 agagagaAAGATATCTCTGgtgtcccttccttttcagatgaagaccccagtcctaacagattagggcctcacgcttttgcc i chlSab2.chr12 C 0 I 315 s calJac3.chr5 21636005 74 - 159171411 ----agaga--gatctctggtgtctcttcc-tttcagatgagggccccagtcctaacagatgagggcctcatgcttccgcc i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=17271.000000 s hg38.chrUn_GL000218v1 48920 10 + 161147 cctat-ttaac s panTro4.chr2A 18578812 10 - 113622374 cctat-ttaac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817279 10 + 72422247 cctat-ttaac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40764240 10 + 122973662 cctat-ttaac i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3863829 11 - 112192347 cccatgttaac i rheMac3.chr15 C 0 I 301 s macFas5.chr15 3945444 11 - 112612857 cccatgttaac i macFas5.chr15 C 0 I 301 s papAnu2.chr15 3742964 11 - 107442819 CCCATGTTAAC i papAnu2.chr15 C 0 I 304 s calJac3.chr5 21636079 10 - 159171411 tccat-ttaac i calJac3.chr5 C 0 C 0 e chlSab2.chr12 108546092 315 + 108555830 I e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=2753486.000000 s hg38.chrUn_GL000218v1 48930 988 + 161147 ctttaacttcttaaaagctccttctccaaatacagtcacactgggagatagggcttcaggttaggaattctggggggacataattctctccagaacaGACactaatatcatgagtgctcagattgctagtgaatatgttcttgtt-acaattattttcactttgcagttttaaataatgaatacttggataaaaaatacccactgTATTCTAA---TTTTTTCAACActtcttacttgcatggattctaaacagaagtccaatgtaattcttatgtctgtttctctgtagacaatgtgtttcttcctctgccttatttt-aatattttatctttgttacaggttttctacggtttgaatatgatattcctaggtatgtttttaaaatattcattctgcttggtgttctctgagctttttggatttgtaatttggtgtctgtcattaatttgTGTTTTTTTCCTAGTTAAAATAATGAACTTTATAGATTTTACA--------TTCTCAACTTTC-ACTTATTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTTCAAGTTACATAAGTGAACTGCATAAACATCACTAGTTTCAAGTGTACCCTATAAGAAACACATGGACATACTTGCGTTGTTTAAACACACGGTGTCATATCAATAAACATCAAAGTATCTGACATATATTTGTCCATTAAAAGTAAACACAACTC--TGAGTATCAAATTAAATTAATCATTTGCCTTTTATAATCTAAATCAGAAATTGAAAAACAGGAACATTGTAGAGGTAAGTGGCTGAAAATGCTCTGCTTACTGCACACAAGCACATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAGAAGAAATAATTGAACATTTAAAATATTATTTTCTCAGAAAAGTTAAAGCTTTTAGTGTAAAAGGCATGG--------------------------TAAATGACATTTTAACT------TAATAGTTAACTATATAGCAAA s panTro4.chr2A 18578822 990 - 113622374 ctttaccttcttaaaagctccttctccaaatacagtcacactgggagatagggcttcaggttaggaattctggggggacataattctctccagaacaGTCactaatatcatgagtgctcagattgctagtgaatatgttcttgtt-acaattatttttgctttgcagttttagataatgaatacttggataataaatacccactgTATTCTAA--TTTTTTTCAACActtcttacttgcatggattctaaacagaagtccaatgtaattcttatgtctgtttctctgtagacaatatgtttcttcctctgccttattttaaatattttatctttgttataggttttctacagtttgaatatgatattcctagttatatttttaaaatattcatcctgcttggtgttctctgagctttttggatttgtaatttggtgtctgtcattaatttgTGTTTTTTTCCTAGTTAAAAAAATGAACTTTATAGATTTTACA--------TTCTCAACTTTC-ACTTACTTTCAAAATGAGAGACAAGACA-CCTAAACTGCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTTCAAGTTACATAAGTGAGCTGCATAAACACTACTAGTTTCAAGTGTACCCTGTAAGAAACACATGGACATACTTGCGTTGTTTAACCACACAGTGTCATACCAATAAACACCAAAGTATCTGACATATATTTGTCCATTAAAGGTAAACACAATTC--TGAGTATCAAATTAAATTGATCATTTGCCTTTTATAAGCTAAATCAGAAACTGAAAAACTGGAAGAATGTAGAGGTAAGTAGCTGAAAATGCTCCACTTACTGCACACAAGCACATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAGAAGTAATAATTGAACATTTAAAATATTATTTTATCAGAAAAGTTAAAGCTTTTAGTGTAAAAAGCACGG--------------------------TAAATGACATTTTAACT------TAATAGTTAACTATATAGCAAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11817289 986 + 72422247 ctttaccttcttaaaagctccttgtccaaatacagtcacactgggagatagggcttcaggttgggaattctggggggacataattctctccagaacaGACACTAATATCATGAGTGCTCAGGTTGCTAGTGAATATGTTCTTGTTAACAATTATTTTTGCTTTGCAGTTTTAGATAATGAATACTTGGATAATAAATACCCACTGTATTCTAA--TTTTTTTCAACActtcttacttgcatggattctaaacaaaagtccaatgtaattcttatgtctgtttctttgtagacaatgtgtttcttcctctgtcttatttt-aatattttatctttgttacaagttttctacagtttgaatatgatattcctaggtatatttttaaaatattcatcctgcttggtgttctctgaggtttttggatttgtaatttggtgtctgtcattaatttgT-TTTTTTTCCTAGTTAAAAAAATTAACTTTATAGATTTTACA--------TTCTCAACTTTCAACTTACTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTTCAAGTTACATAAGTGAGCTGCATAAACACTACTAGTTTCAAGTGTACCCTCTAAGAAACACATGGACATACTTGCGCTGTTTAACCACACAGTGTCATATCAATAAACATC-AAGTATCTGACATATATTTGTACATTAAAGGTAAACACAACTC--TGAGTATCAAATTAAATTAGTCATTTGCCTTTTATAATCTAAATCGGAAACTGAAAAACTGGAAGAATGTAGTGGTAAGTAGCTGAAAATGCTCCACTTACTGCACACAAGCACATCACGACAAAGAACGCTAGAAGTAGCTTTCCTCAGAAGTAATAATTGAACATTTAAAA---TATTTTATCAGAAAAGTTAAAGCTTTTAGTGTAAAAAGCATGG--------------------------TAAATGACATTTTAACT------TAATAGTTAACTATATAGCAAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40764250 986 + 122973662 cttcaccttcttaaaagttccttttccaaatacagccacactgggagacagggcttcgggctaggaattctggggggacataattctctccagaacaGACACTAATATCATGAATGCTCAGATTGCTAGTGAATATGTTCTTGTT-ACAATTATTTTAGCTTTGCAGTTTTAGATAATGAATACTTGGATAATAAATACCCACTATATTCGAAATTTTTTTTCAACActtcttacttgcatggattctaaacagaagtccaatgtaattcttgtgtctgtttctctgtagaca---tgtgttcttctctg-cttatttt-aatattttatctttgttacaggttttctacagttcgaatatgatattcctaggtatatttttaaaatgttcatcctgcttggtgttctctgagctttttggatttgcaatttggtgtctgtcattaatttgTGTTTTTTTCCTAGTTAAAA-AATGAACTTTATAGATTTTACA--------TTCTCAACTTTC-ACTTATTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTTCAAGTTACATAAGTGAGCTGCATAAACACTACTAGTTTCAAGTGTACCCTATAAGAAACACATGGGCATACTTGCGTTGTTTAACCACACAGTGTCATATCAATAAACATCAAAGTATCTGACATATATTTGTCCATTAAAGGTAAACACAACTC--TGAGTATCAAATTAAATTAATCATTTGCCTTTTATAATCTAAATCAGAAACTGAAAAACAGGAAGAATGTAGAGGTAAGTAGCTGAAAATGCTCCACTTACTGCACACAAGCACACCATGGCAAAGAATGCTAGAAGTAGCTTTCCTCAGAAGTAAAAATTGAACATTTAAAATATTATTTTATCAGAAAAGTTAAAGCTTTTAGTGTGAAAAGCATGG--------------------------TAAATGACATTTTAACT------TAATCATTAACTATCTAGCAAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3864141 1007 - 112192347 ctttaccttcttaaaagctccttctccaaatacagtcacattgggagatagagcttcaggttaggaattctggggggacaaaattGTCTCCAAAAAAGACactaat---atgagtgctcagattgctggtgaatatgttcatgtt-acaattatttttgcttcacagttttagataatgaatacttggat----aaTATCTGCTGTATTCTAA---TTTTTTCAACActtcttacttgcaaggattgtaaacagaagtctaatgtaattattatgtctgtttctctgtagacaatgtgtttgttcctctgcctttttaa-aatattttatctttgttataggttttctacagtttgaacatgatattcctgggtatatttttaaaatattcatcctgcttggtgttccctgagctttttggatatgtaatttggtgtctgtcattaatttgTGTTTTTTTCCTAGTTAAAA-AATGAACTTTATAGATTTTACA--------TTCTCAACTTTC-ACTTATTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTCCAAGTTACATAAGTGAGTTGCATAAACACTACTA-TTTCAAATGTACCCTATAAGAAACACATGGACATATTTGAGTGGTTTAACCACACAGTGTCATATCAATAAACATCAAAGTATCTGACATGTATTTGTCCATTGAAGGTAAACACAACTC--TGAGTATCAAATTAAATTAATCATTTGCCTTTTATAATCTAAATTGGAAACTGAAAAACCGGAAGAATGTAGAGGTAAGTAACTGAAAACGCTCCACTTACTGCACACAAGCCCATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAG----AATAATTGAACACTTGAAATATTATTTTACCAGAAAAGTTAAAGCTTTTAATGTGAAAATCATGGTAAATGACATTTACCATGACATAAGTTAAATGACATTTTAACTTAATAGTAATAGTTAAGTATCTAGCAAA i rheMac3.chr15 I 301 C 0 s macFas5.chr15 3945756 1007 - 112612857 ctttaccttcttaaaagctccttctccaaatacagtcacattgggagatagagcttcaggttaggaattctggggggacaaaattGTCTCCAAAAAAGACACTAAT---ATGAGTGCTCAGATTGCTGGTGAATATGTTCATGTT-ACAATTATTTTTGCTTCACAGTTTTAGATAATGAATACTTGGAT----AATATCTGCTGTATTCTAA---TTTTTTCAACActtcttacttgcaaggattgtaaacagaagtctaatgtaattattatgtctgtttctctgtagacaatgtgtttgttcctctgcctttttaa-aatattttatctttgttataggttttctacagtttgaatatgatattcctaggtatatttttaaaatattcatcctgcttggtgttccctgagctttttggatatgtaatttggtgtctgtcattaatttgTGTTTTTTTCCTAGTTAAAA-AATGAACTTTATAGATTTTACA--------TTCTCAACTTTC-ACTTATTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTCCAAGTTACATAAGTGAGTTGCATAAACACTACTA-TTTCAAATGTACCCTATAAAAAACACATGGACATATTTGAGTGGTTTAACCACACAGTGTCATATCAATAAACATCAAAGTATCTGACATGTATTTGTCCATTGAAGGTAAACACAACTC--TGAGTATCAAATTAAATTAATCATTTGCCTTTTATAATCTAAATTGGAAACTGAAAAACCAGAAGAATGTAGAGGTAAGTAACTGAAAACGCTCCACTTACTGCACACAAGCCCATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAG----AATAATTGAACACTTGAAATATTATTTTACCAGAAAAGTTAAAGCTTTTAATGTGAAAATCATGGTAAATGACATTTACCATGACATAAGTTAAATGACATTTTAACTTAATAGTAATAGTTAAGTATCTAGCAAA i macFas5.chr15 I 301 C 0 s papAnu2.chr15 3743279 1007 - 107442819 cttTACCTTCTTAAAAGCTccttctccaaatacagtcacattgggagATAGAGCTTCAGGTTAGGAATTCTGGGGGGACAAAATTGTCTCCAAAAAAGACACTAAT---ATGAGTGCTCAGATTGCTGGTGAATATGTTCATGTT-ACAATTATTTTTGCTTCACAGTTTTAGATAATGAATACTTGGAT----AATATCTGCTGTATTCTAA---TTTTTTCAACACTTCTTACTTGCAAGGATTGTAAACAGAAGTCTAATGTAATTATTATGTCTGTTTCTCTGTAGACAATGTGTTTGTtcctctgccttttaaa-aatattttatctttgttataGGTTTTCtacagtttgaatatgatattcctaggtatatttttaaaatattcatcctgcttggtgttctctgagctttttGGATATGTAATTTGGTGTCTGtcattaatttgtgtttttttcctagtGAAAA-AATGAACTTTATAGATTTTACA--------TTCTCAactttc-acttattttaaaaatgagagacaaGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTCCAAGTTACATAAGTGAGTTGCATAAACACTACTA-TTTCAAATGTACCCTATAAGAAACACATGGACATATCTGAGTGGTTTAACCACACAGTGTCATATCAATAAACATCAAAGTATCTGACATGTATTTGTCCATTGAAGGTAAACACAACTC--TAAGTATCAAATTAAATTAATCATTTGCCTTTTATAATCTAaattggaaactgaaaaaccGGAAGAATGTAGAGGTAAGTAACTGAAAACGCTCCACTTACTGCACACAAGCCCATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAG----AATAATTgaacatttgaaatattattttaccaGAAAAGTTAAAGCTTTTAATGTGAAAATCATGGTAAATGACATTTACCATGACATAAGTTAAATGACATTTTAACTTAATAGTAATAGTTAAGTATCTAGCAAA i papAnu2.chr15 I 304 C 0 s chlSab2.chr12 108546407 1005 + 108555830 ctttaccttcttaaaagctccttctccaaatacagtcactttgggagatagagcttcaggttaggaaatctggggggacaaaattGTCTCCAAAAAAGACACTAAT---ATGAGTGCTCAGATTGCTGGTGAATATGTTCATGTT-ACAATTATTTTTGCTTCACAGTTTTAGATAATGAATACTTGGAT----AATATCTGCTGTATTCTAA---TTTTTTCAACActtcttacttgcatggattgtaaacagaagtccaatgtaattattatgtctgtttctctgtaggcaacgtgtttgttcctctgcctttttaa-aatattttatcttttttataggttttctacagtttgaatatgatatacctaggtatatttttaaaatattcatcctgcttagtgttctctgagctttttggatatgtaatttggtgtctgtcattaatttgtggTTTTTTCCTAGTTAAAA-AATGAACTTTATAGATTTTACA--------TTCTCAACTTTT-ACTTATTTTCAAAATGAGAGACAAGACA-CCTAAACTCCAAGATTTCAGTCCTGAATGCAATAGTACCAGATTTCCAAGTTACTTGAGTGAGCTGCATAAACACTACTA-TTTCAAGTTTACCCTATAAGAAACACATGGACATACTTGAGTGGTTTAAC--CACAGTGTCATATCAATAAACATCAAAGTATCTGGCATGTATTTGTCCATTGAAGGTAAACACAACTC--TGAGTATCAAAGTAAATTAATCATTTGCCTTTTATAATCTAAATTGGAAACTGAAAAACCGGAAGAATGTATAGGTAAGTAACTGAAAACGCTCCACTTACTGCACACAAGCCCATCATGACAAAGAATGCTAGAAGTAGCTTTCCTCAG----AATAATTGAACATTTGAAATACTATTTTACCAGAAAAGTTAAAGGTTTTAATGTGAAAATCATGGTAAATGACATTTACCATGACATAAGTTAAATGACATTTTAACTTAATAGTAATAGTTAAGTATCTAGCAAA i chlSab2.chr12 I 315 C 0 s calJac3.chr5 21636089 980 - 159171411 ctttatcttcttaaaagctccttctccaaatacggtcacactgcg-gatagggcttcgagttaggaattctgtggggacataattctgtccgtaacaGACACTGATGTCATGA--GCCCAGATTGCTAGTGAATCTGTTCATGTT-GCAATTATTTT-GCTTCACAATTTTAGATAATGAATACTTGCATAATAAATATCCACTGCATTCCAA---TTTTTTCAACActttttatgtgcatggattctaaacaaaacttcagtgtaattcttatgtctgttccaccatagataatgtgtttctccttctgccttattta-gatattttatctttgttatagcttttctacagtttgaatatgatattcct-ggtatatttttaaaatattcatgcagcttggtgttctctgagctttctagacttgtaatttggtgtc--tcattaatttgTTTTTTTATTTTAATGAAAA-AATGAACTTTATAGATTTTACATCTCAAGCTCCCAAACTTTC-ACTTATTTTAAAAATGAGAGGCAAGACGCCCTAACCCCCAGGATTTCAGTCCTGAATGCAATAGTACCAGATTTGTAAGTTACATAAGTGAGCTGCATAAACACTACTACCTTCAAGTGCACCCCA----AAACATACGGTCATACCTGGATTGTTTAAC--CACAGTGTCATAGCAATAAACATCGAAGTATCTGACATATATTTGTCCATTAAAGGTAAACATAATTCTATGAGTATCAAATTACATTCCTCATTTGCCTTTTATGATCTAAATTGGAAACTGAAAACCGGGAAGAATGTAGAGGTAAGTA-CTGAAAACGCTCCGCTTACTGCGCACAGGCACATCATGACAAAGAATGCTACAAGTGGC-TCCCTCAGAAGTAATAATTGAAAATTGAAAA---TATTTCAGCAGAAAAGTTAAGGCTTTTAGTGTGAGAAGCATGG--------------------------CAAATGACATATTCACT------TAACCGTTAACTATCTAGCAAA i calJac3.chr5 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=2997.000000 s hg38.chrUn_GL000218v1 49918 1 + 161147 T s panTro4.chr2A 18579812 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11818275 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40765236 1 + 122973662 T i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3865148 1 - 112192347 T i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3946763 1 - 112612857 T i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3744286 1 - 107442819 T i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108547412 1 + 108555830 T i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21637069 1 - 159171411 T i calJac3.chr5 C 0 C 0 s tupBel1.scaffold_1182.1-172424 48347 1 + 172424 C i tupBel1.scaffold_1182.1-172424 N 0 N 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=1970051.000000 s hg38.chrUn_GL000218v1 49919 705 + 161147 TATAGATTTCAAGCAATTAGTT-ACCCACATTTCACCAGAACCTTCAGTGAAAGTGTCTACTCTCAACA-TTGACCAGAACCTTCCTGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTCAGCTTTACATATCTGT-AAAACCTAAGATTACTCAATGAGAAGTTACACCTTATTCTGTACTAGATACTCGTAATATAT--ATAGATTTAGAACAAATGGATGTTTTTCAACTTCAAAAAAAGTATTTTAATTTACACAATGTTAGATTGTTTTTCACCCATGTGTATACATAACAGTGTTTCCCAAATTCACAGGGTCCATTTCCATAATTCTAAAGCAAAAATAGAGGCACACAAATGGATAATAATTCATAGTTTTATGCC-TTTTTTTAACCTATCTTTAAAGAAATTCAGTTGCCATGTAGACAAAGATGTGATGAACCTGTAACACATTTCTATGACTTGGAAAATTAAAGGTCTAAAAATCCTAAATGTAGTAGCTCTGGGCAGTTTGCAATTTGTGCATGGGTTCACTCACCCTATGGTCCGTGAACTCCCTTATCCTGCAAGCTGTAGGTACTTTCAGCAAATATGAGACTCAATAAGACTAAG---GAAGGGCTTGTTTAAATTAGTTCCCCTCACAGTTGATTCTAATCTTGCAATGAACAGATTTAATGTACTAGTGAGTTAAATTTTAAAGTAATTATAAAG s panTro4.chr2A 18579813 706 - 113622374 TATAGATTTCGAGCAATTAGTT-ACCCACATTTCACCAGAACCTTCAGTGAAAGTGTCTGCTCTCAACA-TTGACCAGAACCTTCTTGTTCTGAAGTGTCTACTCTTTAGAGTTGTTTTAGCTTTACATATCTGTAAAAACCTAAGACTCCTCAATGAGAAGTTACAGCTTATTCTGTACTAGATACACATAATATAT--ATAGATTTAGAACAAATGGATGCTTTTCAACTTCAAAAAAAGTATTTTAATTTACACAATATTAGATTTTTTTTCACCCATGTGTATGCATAACAGTGTTTCCCAAATGCGCAGGGTCCACTTCCATAATTCTAAAGCAAAAATAGAGGCACACAAATGGATAACAGTTCATAGTTTTATGCCTTTTTTTTAACCTATCTTTAAAGAAATTCAGTTGCCATTTAGATAAAGATGTGATGAACTCGTAACAAATTTCTATGACTTGGAAAACTAAAGGTCTGAAAATCCTAAATGTTGTAGCTCTGGGCAGTTTGCAATTTGTGCATGGGTTCACTCACCCTGTGGTCCGTGAACTCCCTTATCCTGCAAGCTGTAGGTACTTTCAGCAAATATGAGACTCAA-AAGACTAAG---GAAGGGCTTGTTTAAATTAGTTCCCGTAACAGTTGATTCTAATCTTGCAATGAACAGATTTAATATACTAGTGAGTTAAATTTTAAAGTAATTATAAAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11818276 700 + 72422247 TACAGATTTTGAGCAATTAGTT-GCCCACATTTCACCAGAACCTTCAGTGAAAGTGTCTACTCTCAACA-TTGACCAGAACCTTCCTGTTCTGAAGTGTTTACTCTTTAGAGTTGCTTTAGCTTTACGTATCTGT-AAAACCTAAGATTCCTCAATGGGAAGTTACAGCTTATTCTGTACTAGATACACATAATATAT--ATAGATTTAGAACAAATGGATGCTTTTCAACTTC---AAAAGTATTTTAATTTACACAATATTAGATT-TTTTTCACCCATGTGTATGCCTAACAGTGTTTCCCAAATGCACAGGGTCCACTTCCATAATTCCAAAGCAAAAGTAGAGGCATACAAATGGATAATAGTTCATAGTTTTATGCC-TTTTTTTAACCTATCTTTAAAGAAATTCAGTTGCCATTTAGACAAAGATGTGATGAACTTGTAACAAATTTCTATGACTTGGAAAATTAAAGGTCTAAAAATCCTAAATGTTGTAGCTCTGGGCAGTTTGCAATTTGTGCTTGGGTTCACTCACCCTGTGGTCCGTGAACTCCCTTATTCTGCAAGCTGTAGGTACTTTCAGCAAATACGAGACTCAA-AAGACTAAG---GAAGGGCTTGTTTAAATTAGTTCCCCTAACAGTTGATTCTAACCTTGCAATGAACAGATTTAATATACTAGTGAGTTAAATTTTAAAGTAATTATAAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40765237 704 + 122973662 TATAGATTTCAAGCAATTAGTTAACCCACATTTCACCAGAACCTTCAGTGAAAGTGTCTACTCTCAACA-TTGACGAGAACCTTCCTGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTTAGCTTTACATATCTGT-AAAACCTAAGATACCTCAATGAGAAGTTACAGCTTATTCTGTACTAGATACACATAATATAT--ATAGATTTAGAACAAATGGATGCTTTTCAAATTCAAAAAAAGTATTTTCATTTACACAATGTTAGATTTTTTTTCACACATGTGTATGCATAAAAGTGTTTTCCAAATGCACAGGGTCCACTTCCATAATTCTAAAGCAAAAATAGAGGCACACAAATGGATAATAGTTTGTAGTTTTATGCA--TTTTTTAACCTATCTTTAAAGAAATTCAGTTGCCATTTAGACAGAGATGTGACGAACTTGTAACAAATTTCTATGACTTGGAAAATTAAAGGTCTAAAAATCCTAAATGTTGTAGCTCTGGGCAATTTGCAATTTGTGCATGGGTTCACTCACCCTAGGTTCCGTGAACTCCCTTATCCTGCAAGCTGTAGGTAGTTTCAGCAAATATGAGACTCAA-AAGACTAAG---GAAGGGCTTGTTTAACTCAGTTCCCTTAAAAGTTGATTCTAATCTTGCAATGAACAGATTTAATATACTTGTGAGTTAAATTTTAAAGTAATTATAAAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3865149 699 - 112192347 TACAGATTTTGAGCAATTAGTT-ACCCACATTTCACCAGGACCTTCAGTGAAAGTGTCTGCTCTCAACATTTGACCAGAACCTTCCAGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTTAGCTTTACATATCTGT-AAAACCTAAGATTCCTCAATGAGAAGTTATAGTTTATTCTGTACTAGATACATGTAATATATATATAGATTTAGAACAAATGGATGCTTTTTACCTTCAGAGAAAGTATTTTCATTTATACAACATTAGATT-TTTTT-ACCCATGTGTAGGCATGAAAGTGTTTTCCAAATGCACAGGGTCCACTTCCACAATTCTAAAGCAAAAATAGAGGCATACTAATGGATAATAATTTATAGTTGTATGCA---TTTTTTACCTATGTTTAAAGAAATTCAATTGCCATTTAGACAGAGATGTGATGAACTTGTAACACATTTCTATGACTTGGAAAATTAAAGGTCTAA-------AAATGTCATAGCTCTGGGCAATTTGCAATTTGTGCATGGGTTCACTCACCCTATGGTCCGTGAACTCCCTTATCCTGCCAACTGGGGGTACTTTCAGCAAATATGAGACTCAA-AAGACTAAGGAAGAAGGGCTCATTTAAATTAGTTCCCCTAAAAGTTGATTCTAATCTTGCAATGAACAGTTTTAATATACTTGTGAGTTAAATTTTAAAGTAATTATAAAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3946764 700 - 112612857 TACAGATTTTGAGCAATTAGTT-ACCCACATTTCACCAGGACCTTCAGTGAAAGTGTCTGCTCTCAACATTTGACCAGAACCTTCCAGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTTAGCTTTACATATCTGT-AAAACCTAAGATTCCTCAATGAGAAGTTATAGTTTATTCTGTACTAGATACATGTAATATATATATAGATTTAGAACAAATGGATGCTTTTTACCTTCAGAGAAAGTATTTTCATTTATACAACATTAGATT-TTTTTCACCCATGTGTAGGCATGAAAGTGTTTTCCAAATGCACAGGGTCCACTTCCACAATTCTAAAGCAAAAATAGAGGCATACTAATGGATAATAATTTATAGTTGTATGCA---TTTTTTACCTATGTTTAAAGAAATTCAATTGCCATTTAGACAGAGATGTGATGAACTTGTAACACATTTCTATGACTTGGAAAATTAAAGGTCTAA-------AAATGTCATAGCTCTGGGCAATTTGCAATTTGTGCATGGGTTCACTCACCCTATGGTCCGTGAACTCCCTTATCCTGCCAACTGGGGGTACTTTCAGCAAATATGAGACTCAA-AAGACTAAGGAAGAAGGGCTCATTTAAATTAGTTCCCCTAAAAGTTGATTCTAATCTTGCAATGAACAGTTTTAATATACTTGTGAGTTAAATTTTAAAGTAATTATAAAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3744287 700 - 107442819 TACAGATTTTGAGCAATTAGTT-ACCCACATTTCACCAGGACCTTCAGTGAAAGTGTCTGCTCTCAACATTTGACCAGAACCTTCCAGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTTAGCTTTACATATCTGT-AAAACCTAAGATTCCTCAATGAGAAGTTATAGTTTATTCTGTACTAGATACAcgtaatatatatatagatttagaACAAATGGATGCTTTTTACCTTCAGAGAAAGTACTTTCATTTATACAACATTAGAtt-tttttCACCCATGTGTACGCATGAAAGTGTTTTCCAAATGCACAGGGTCCACTTCCACAAatctaaagcaaaaatagaggCACACTAATGGATAATAATTTATAGTTGTATGCA---TTTTTTACCTATGTTTAAAGAAATTCAATTGCCATTTAGACAGAGATGTGACGAACTTGTAACACATTTCTATGACTTGGAAAATTAAAGGTCTAA-------AAATGTCATAGCTCTGGGCAATTTGCAATTTGTGCATGGGTTCACTCACCCTATGGTCCGTGAACTCCCTTATCCTGCCAGCTGGGGGTACTTTCAGCAAATATGAGACTCAA-AAGACTAAGGAAGAAGGGCTCATTTAAATTAGTTCCCCTAAAAGTTGATTCTCATCTTGCAATGAACAGTTTTAATATACTTGTgagttaaattttaaagtaattataaag i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108547413 699 + 108555830 TACAGATTTTGAGCAATTAGTT-ACCCACATTTCACCAGGACCTTCAGTGAAAGTGTCTGCTCTCAACATTTGACCAGAACCTTCCAGTTCTGAAGTGTCTACTCTTTAGAGTTGCTTTAGCTTTACATATCTGT-AAAACCTAAGATTCCTCAATGAGAAGTTATAGTTTATTCTGTACTAGATACATGTAATATATACATAGATTTAGAACAAATGGATGCTTTTTACCTTCAGAGAAAGTATTTTCATTTATACAACATTAGATT-TTTTTCACCCATGTGTAGGCGTGGAAGTGTTTTCCAAATGCACAGGGTCCACTTCCATAATTCTAAAGCAAAAATAGAGGCACACTAATGGATGATAATTTATAGTTGTATGCA---TTTTTTACCTATGTTTAAAGAAATTCAATTGCCATTTAGACAGAGATGTGACGAACTTGTAACACATTTCTATGACTTGGAAAAATAAAGGTCTAA-------AAATGTCATAGCTCTGGGCAATTTGCAATTTGTGCATGGGTTCACTCACCCTATGGTCCATGAA-TCCCTTATCCTGGCAGCTGGGGGTAATTTCAGCAAATATGAGACTCAA-AAGACTAAGGAAGAAGGGCTCATTTAAATCAGTTCCCCTAAAAGTTGATTCTAATCTTGCAACGAACAGTTTTAATATACTTGTGAGTTAATTTTTAAAGTAATTATAAAG i chlSab2.chr12 C 0 C 0 s calJac3.chr5 21637070 695 - 159171411 TATAGATGTTGAGCGATTAGTG-ACCCACATTTCACCAAAACCTTCCGTGCAAGTGTCTACTCTCAACATTTTACCAGAACATTCCTGTTCTGAAGTGTCT-CCCTTTAGACTCACTTTAGCTTTACATACCTAT-AAAACCTAAGATTCCTCAATGGGAGTTTATAGCTTATTCTGTACTAGATACACGTAATATAT--ATAGATTTAGAACAAATGGGTGCTTTTCACCCTCAAAGAATGTATTTTAATTTACACAAAATTAGATT-TTTTTTACCCATATGTATGCATAAAAGTGTTTTCCAAATGCACAGAGTCTATATCCATTTTCCTAAAGCGAAGATAGTGGCACA-TGGTGGATAATAGCTTATAGTTTTATGCA----TTTTAACCTATCTTTGAACAAACTCAATTGCCATTTAGACAGAGATGTGACGAGCTTGTTACAAATTTCTATGACTTGGAAAATTAAAGATCTAAAAGCCCTAAATCTTGTAGCTCTGGGCAATTTGC-------TCATGGGTTCATTCATCCTTTGGGCTGTGAACTCCCTTATCCTGCAGGCTGTAGGTATTTTCAGCAAATATGAGACTCAA-AAGACTAAGGAAGAAGGGCTTGTTTAAATTAGTTCCCCTAAAAGTTGTTTCTAATCTTGCAATGAACATATTTAATGTACTTGTGAATTAAATTTTAAAGTAATTATAAGg i calJac3.chr5 C 0 N 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=253661.000000 s hg38.chrUn_GL000218v1 50624 118 + 161147 CCATTTACTCTATCATAAATGAATGAAATGTA----AGAATCACACTTAAAACAAGTCTTTCATTTTAATGAATGGTATCTTTCATTTATATAC-AAGGAATTCACTTGCCAGCAGCATTTAA s panTro4.chr2A 18580519 111 - 113622374 CCATTTACTCTATC----ATGAATGAAATGTA----AGAACCACACTTAAAACAAGTCTTTCATCTT----AATGGTATCTTTCATTTATATACAAAGGAATTCACTTGCCAGCAGCATTTAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11818976 115 + 72422247 CCATTTACTCTATCATAAATGAATGAAATGTA----AGAACCACACTTAAAACAAGTCTTTCATTTT----AATGGTATCTTTCATTTATATACAAAGGAATTCACTTGCCAGCAGTATTTAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40765941 99 + 122973662 ACATTTACTCTATCATAAATGAATGAAATGTA----AGAACCACACTTAAAGCAAGTCTTTCATTTTAATGAATGGTATCTTTCATTTA--------------------CCAGCAGCatttaa i nomLeu3.chr1a C 0 I 334 s rheMac3.chr15 3865848 123 - 112192347 CCATTTACTCTATCATAAATGAATGAAATGTAATTCAGAACCACACTTGAAACAAGTCTTTCATTTTAATGAATGGTATCTTTCATTTATATACAAAGGAATTCAATTGCCAGCAGCATTTAA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3947464 123 - 112612857 CCATTTACTCTATCATAAATGAATGAAATGTAATTCAGAACCACACTTGAAACAAGTCTTTCATTTTAATGAATGGTATCTTTCATTTATATACAAAGGAATTCAATTGCCAGCAGCATTTAA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3744987 123 - 107442819 CCATTTACTCTatcataaatgaatgaaatgtaatTCAGAACCACACTTGAAACAAGtctttcattttaatgaatgGTATCTTTCATTTATATACAAGGGAATTCAATTGCCAGCAgcatttaa i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108548112 123 + 108555830 CCATTTACTCTATCATAAATGAATGAAATGTAATTCAGAACCACACTTGAAACAAGTCCTTCATTTTAATGAATGGTATCTTTCATTTATATACAAAGGAATTCAATTGCCAGCAGCATTTAA i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=2094636.000000 s hg38.chrUn_GL000218v1 50742 912 + 161147 ATATAGGAATAGTCTCGTCTTTTCTCTAGTGCCTTTTATAAAGCAGTGCCATTTCTAACTAGGTGTATTTGTTTCCCAGCTATTCAGTAACTACACTATAGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAGAAGATTTAGCATTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCATTAGTAAAATAAATTGACACCTTATGTGAGAATCATTAAGTTGGTT---TAATTAT---------------------------------ATCACAGAAGTATGGGCTCACTAATATTTATACCAATTTATGCTAATTAAACCAGAAAGTTTCTGTAGGTAATTCAGCTCTGCGCACCATTTAATAGGGTTATGCCAAACAGAACCAATGGTTATATAATACCCAGAATATAAACCTCAGCAAATTCATACTTTTGGAATGGCAACACAAGTG------AGAATGAGAGGCAATATTTCATTTCAAAGTACCATAGGCTGCTAAGAGTGTTCTTTTCTTT---TAAAAATTTGTGTGGTTGTTAGTAATGTACCTTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTAGAACCTATATTACGGAAGTCAGCCTTGCCCATTTCTTTAGTTCAGTGATTAAAATTGAAATTACTTTTTCAAAACAATTGAACTGCTGC---TTACAATATAAATAGAATACCAACAGGATTCCTGTTGTATTCACATTATTCTCTAATTAGTATTTTTACATTTCCACTCTGACCTGACCTTCAGTAGTTCCTTTATTTTTATTTTCAAGCatttttgtgagtatataataagcatatatatttatggggtgcatgagatgttttgatacaggcatgcagcatgaactaatcacatcatggagagt-gggtatccatccctttaagcatgtttcctttgtgttac s panTro4.chr2A 18580630 901 - 113622374 GTATAGAAATAGTCTCGTCTT-----GAGTGCCTTTTATAAAGCAGTGCCATTTCTAACTAGGTGTATTTGTTACCCAGCTTTTCAGTA-----ACTATAGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAGAAGATTTAGCATTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCATTAGTA----AAATTCACACCTTATGTGAGAATCATTAAGTTGGTTTAATAATTAT---------------------------------ATCACAGAAGTATGGGCTCACTAAT----------ATTTATGCTAATTAAACCAGAAAGTTTCTGTAGGTAATTCAGCTCTAAGCACCATTTAGTAGGGTTATGCCAAGTAGAACCAATGGTTATATAATACCCAGAATATAACCCTCAGCAAATTCAAACTTTTAGAATGGCAACACAAGTGAGAATTAGAATGAGAGGCAATATTTCATTTAAAAGTACCATAGGCTGCTAAGAGTGTTCTTTTCTTT---TAAAAATTTGTGTGGTTGTTAATAATGTACCCTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCTATATTATGGAAGTCAGTGTTGCCCATTTCTTTAGCTCAGTGATTAAAATTGAAATTGCTTTGACAAAACAATTGAACTGCTGCTGTTTACAATACAAATAGAACACCAACAGGATTCCTGTTGTATTCACATTATTCTCTAATTAGTATTTTTGCATTTCGACTCTGACCTAACCTTCAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagtatataataggcatatatatttatggggtgcatgagatgttttgatacaggcatgcagtgtgaactaatcacatcatggagggtggggtatccatcctttcaagcatgtatcctttgtgttac i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11819091 914 + 72422247 ATATAGAAATAGTCTCGTCTTTTCTCTAGTTCCTTTTATAAAGCAGTGCCATTTCTAACTGGGTGTATTTGTTACCCAGCTTTTCAGCAACTACACTATAGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAGAAGATTTAGCGTTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCGTTAGT-----AAATTCACACCTTACGTGAGAATCATTAAGTTGGTTCAATAATTAT---------------------------------ATCACAGAAGTATGGGCTCACTAATATTTAAGCCAATTTATGCTAATTAAACCAGAAAGTTTCTGTAGGTAATTCAGCTGTAAGCAGCATTTAATAGGGTTATGCCAAATAGAACCAATGGTTATATAATACCCAGAATATAAACCTCAGCAAATTCAAACTTTTAGAATGGCAACACAAGTGAGAATTAGAATGAGAGGCAATATTTCATTTAAAAGTACCATAGGCTGCTAAGAGTGTTCTTTTCTTT---TAAAAATTTGTGTGGTTGT---TAATGTACCTTAACACCGGTCCTCCTTGACAGTGGTGTTAGAGATGGTTAGGTGGAACCTATATTACGGAAGTCAGTGTTGCCCATTTCTTTAGTTCAGTGATTAAAATTGAAATTGCTTTGACAAAACAATTGAACTGCTGC---TTACAATACAAATAGAATACCAACAGGATTCCTATTGTATTCACATTATTCTCTAATTAGTATTTTTGCATTTCGACTCTGACCTGACCTTCAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagcatataatagacatatatatttatggggtgcatgagatgttctgatacaggcatgcagtgtgaactaatcacatcatggagagtggggtatccatcccttcaagcacgtatccttcgtgttac i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40766374 918 + 122973662 atatagaaataGTCTCATCTTTTCTCTAGTCCCTTTTATAAAGCAGTGCCATTTTTAACTAGGTGTATTTGTTACCCAGCTTTTCAGTAACTACACTGTAGGTATCTAATAGATTCAAGAAAAGATTGGAAAACTGAAAAGATTTAGCATTTTAAACATTTGAAAAATGTTGCTACAAAGCACAGATTATGAATGCATTAGTAAAATACATTCACACCTTATGTGAGAATCATTAAGTTGGTTTAATAATCAT---------------------------------ATCACAGAAGTCTGGGCTCACTAATATTTATGCCAATTTATGCTAATTAAACCAGAAAGTTCCT----GTAATTCAGCTCTAAGCACCATTTAATAGGGTTATGCCAAATAGAACCAATGGTTATATAATACCCAGAATATAAACCTCAGCAAATTCAAACTTTTAGAATGGCAACACAAGTGAGAATTAGAATGAGGGGCAATATTTCATTTAAAAGTTCCATAGACTGCTAAGAGTGTTCTTTTCTTT---TAAAAATTTGTGTGATTGTTAATAATGTACCTTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCTATATTATGGAAGTCAGTGTTGCCCATTTCTTTAGTTCAGTGATTAAAACTGAAATTGCTTTTACAAAACAATTGAACTGCTGC---TTACAATATAAATAGAATACCAACAGGATTCCTGTTGTATTCACATTATTCTCTAATTAATATTTTTGCATTTTGACTCTGACCTGACCTTCAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagtatataataggcatatatatttatagggcgcatgagatgttttgatacaggcatgcaatgtgaactaatcacatcacggagagtggggtatccatcccttcaagcatgtatcctttgtgttac i nomLeu3.chr1a I 334 C 0 s rheMac3.chr15 3865971 923 - 112192347 ATATAGAAATAGTCCCATCTTTTCTCTAGTCTCTTTTATAAAGTAGTGCCATTTTTAAATAGGTGTATTTGTTACCCAGCTTTTCAGTAACTACACTATGGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAAAAGATTTAGCATTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCATTAGTAAAATAAATTCACACCT---------------------------------TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAGAAGTATGGGCTCATTAATATCTATGCCAATTTATGCTAAATAAATGAGAAAGTTTCTGTAGCTAATTCAGCTCTAAGCACCATTAAATACGGTTATGCCAAACAGAACC--TGGTTATGTAATACCCAGAATATAAACCTCAGCAAATTCACACTTTTAGAATGACAACACAAGTGAGAGTTAGAATGAGAGGCAATATTTTATTTAAAAGTACCATAGGCTGCTAAGAGTATTCTTTTCTTTAAATAAAAATTTGTGTGGTTGTTAATAATGTACCTTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCTATATTACGGAAGTCAGAGTTGCCCATTTCTTTAGTTCAGTGATTAAAATTGAAATTGCTTTTACAGAACAATTGAACTGCTGC---TTACAATGTAAATAGAATACCAACAAGATTCCTGTTGTATTCCCATTATTCTCTAATTAGTATTTTTGCATTTCAACTCTGACCTGACCTTGAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagtatataataggcatatatatttaccaggtgcgtgagatgttttgatgcaggcacgcaatgtgaactcatcatatcatggagagcagggtatgcatcccttcaagcacgtatcctttgtgttat i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3947587 923 - 112612857 ATATAGAAATAGTCCCATCTTTTCTCTAGTCTCTTTTATAAAGTAGTGCCATTTTTAAATAGGTGTATTTGTTACCCAGCTTTTCAGTAACTACACTATGGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAAAAGATTTAGCATTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCATTAGTAAAATAAATTCACACCTTATGTGAGAATCATTAAGTTGGTTTAATAATTAT---------------------------------ATCACAGAAGTATGGGCTCATTAATATCTATGCCAATTTATGCTAAATAAATGAGAAAGTTTCTGTAGCTAATTCAGCTCTAAGCACCATTAAATACGGTTATGCCAAACAGAACC--TGGTTATGTAATACCCAGAATATAAACCTCAGCAAATTCACACTTTTAGAATGACAACACAAGTGAGAGTTAGAATGAGAGGCAATATTTTATTTAAAAGTACCATAGGCTGCTAAGAGTATTCTTTTCTTTAAATAAAAATTTGTGTGGTTGTTAATAATGTACCTTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCTATATTACGGAAGTCAGAGTTGCCCATTTCTTTAGTTCAGTGATTAAAATTGAAATTGCTTTTACGGAACAATTGAACTGCTGC---TTACAATGTAAATAGAATACCAACAAGATTCCTGTTGTATTCCCATTATTCTCTAATTAGTATTTTTGCATTTCAACTCTGACCTGACCTTGAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagtatataataggcatatatatttaccaggtgcgtgagatgttttgatgcaggcacgcaatgtgaactcatcatatcatggagagcagggtatgcatcccttcaagcacgtatcctttgtgttat i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3745110 923 - 107442819 atatagaaatagtCCCATCTTTTCTCTAGTCTCTTGTATAAAGTAGTGCCATTTTTAAATAGGTGTATTTGTTACCCAGCTTTTCAGTAACTACACTATGGGTATCTAATAGATTCAAGAAAAGATTGGAAAATTGAAAAGATTTagcattttaaacatttgaaaaatgttgcTACAAAGCATAGATTATGGATGcattagtaaaataaattcaCACCTTATGTGAGAATCATTAAGTTGGTTTAATAATTAT---------------------------------ATCACAGAAGTATGGGCTCATTAATGTCTATGCCAATTTATgctaaataaatgagaaagtttCTGTAGGTAATTCAGCTCTAAGCACCATTAAATACGGTTATGCCAAACAGAACC--TGGTTATGTAATACCCAGAATATAAACCTCAGCAAATCCACACTTTTAGAATGACAACACAAGTGAGAGTTAGAATGAgaggcaatattttatttaaaagtaccATAGGCTGCTAAgagtattcttttctttaaataaaaatttgtgtgGTTGTTAATAATGTACCTTAACACTGGCCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCTATATTACGGAAGTCAGAGTTGCCCATTTCTTTAGTTCAGTGATTAAAATTGAAATTGCTTTTACAGAACAATTGAACTGCTGC---TTACAAGGTAAATAGAATACCAACAAGATTCCTGTTGTATTCCCATTATTCTCTAATTAGTATTTTTGCATTTCAACTCTGACCTGACCTTGAGtagttcctttatttttattttcaaacatttttgtgaGTATATAATAGGCATATATATTTACCAGGTGcgtgagatgttttgatgcaggcacACAATGTGAACTCATCATATCATGGAGAGCAGGGTATGCATCCCTTCAAGCAcgtatcctttgtgttat i papAnu2.chr15 C 0 I 460 s chlSab2.chr12 108548235 925 + 108555830 ATATAGAAATAGTCCCATCTTTTCTCTAGTCTCTTTTATAAAGTAGTGCCATTTTTAAATAGGTGTATTTGTTACCCAGCTTTTCAGTAACTACACTATGGGTATCTAATAAATTCAATAAAAGATTGGAAAATTGAAAAGATTTAGCACTTTAAACATTTGAAAAATGTTGCTACAAAGCATAGATTATGAATGCATTAGTAAAATAAATTCACACCTTATGTGAGAATCATTAAGTTGGTTTAATAATTAT---------------------------------ATCACAGAAGTATGGGCGCATTAATATCTATGCCAATTTATGCTAAATAAATGAGAAAGTTTCTGTAGGTAATTCAGCTCTAAGCACCATTAAATACGGTTATGCCAAACAGAACCAATGGTTATGTAATACCCAGAATATAAACCTCAGCAAATTCACACTTTTAGAATGACAACACAAGTGAGAGTTAGAATGAGACACAATATTTTATTTAAAAGTACCATAGGCTGCTAAGAGTATTCTTTTCTTTAAATAAAAATTTGTGTGGTTGTTAATAACGTACCTTAACACTGGTCCTCCTTGACAGCGGTGTTAGAGATGGTTAGGTGGAACCCATATTACGGAAGTCAGAGTTGCCCATTTCTTTAGTTCAGTGATTAAAAGTGAAATTGCTTTTACAGAACAATTGAACTGCTGC---TTACAATGTAAATAGAATACCAACAAGATTCCTGTTGTATTCACATTATTCTCTAATTAGTATTTTTGCATTTCAACTCTGACCTGACCTTGAGTAGTTCCTTTATTTTTATTTTCAAACatttttgtgagtatataataggcatatatatttactgggtgcgtgagatgttttgatgcaggcacgcaatgtgaactcatcatatcatggagagcagggtatccatcccttcaagcacatatcttttgtgttat i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=1747072.000000 s hg38.chrUn_GL000218v1 51654 770 + 161147 aatccaattagattcttttagttatttttaaatgtacaattattgactagagtccccctgttgtgctatcaaatagtatgtcttattcattccttctgcctatttttgtacccattacccgtgccctg---tctccccccc-cagccccctagtacttactatgtccatgagttcaattgttttgattttt-agatcccacaaataagtgagaacatgcaatgtctgcctttccgtgcttggcttatttcccttaacataatgatatccagttccttccatgttgttgcaaatgactgaatctcattcttttttagggctgaataatactccactgtgtgtatctaccacattttctttaatacattaatctgttgatggacacttaggttgcttccaaatcttagctattgtcaac-agtggtgcaaccaacatgggagtgcagataatttcttcgatatactcatttcttatttctggggtatatatccaacagtgggattgctggatcatgtggcacctctattttcagtgtttagaggaacctccaaactgttctccaccatggctgtacAAGTAGTACCTTAAAATGCAAATGCAATTGGT---AAAAGAACAAGGCAGCGTGTAGTG-CTTGCACTTACAAATACTGCCAGTTTTGTAACAATTTGCA-------------TTTTTTTTGTCTTTGAAAGAGTAACCACTTACTTAATAAAACGGATATTTAAAAGCGCAATATTCCTTCCTTTGCATGGCATGCAGGAATGGTGAAAGCAAAGAAA s panTro4.chr2A 18581531 771 - 113622374 aatccaattacattcttttagttatttttaaatgaacaattattgactagagtccccctgttgtgttatcaaatagtatgtcttattcattccttctgcctatttctgtacccattacccatcccctgccttccccccccc-cagctccctggtacttactgtgtccatgagttcaattgttttgattttt-agatcccacaaacaagtgagaacatggaatgtctgcctttccgtgcttggcttatttcccttaacataattatctccagttccttccatgttgttgcaaatgactgaatctcattcttttttagggctgaataatactccactgtgtgtatctaccagattttctttaatacattaagttattgatggacacttaggttgcttccaaatcttagctattgttaacaagtggtgcaaccaacatgggagtgcagataatttcttcgatatactcatttcctatttttggggtatatacccaacagtgggattgctggatcatgtgaaacctctattttcagtgtttagaggaacctccaaactgttctcaatcatggctgtaccagtagtacattAAAATGCAAATGCAATTGGT---AAAAGAACAAGGCAGCATGTAGTA-CTTGCACTTACAAATACTACCAGTTTCGTAACAATTTGCA------------TTTTTTTTTGTCCTTGGAAGAGTAACC----ACTTAATAAAACAGATACATAAAAGTGCAATATTCCTTCCTTTGCATGGCATCCAGGAATGGTGAAAGCAAAGAAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820005 769 + 72422247 aatccaattacatttttttagttatttttaaatgtacaattactaactagagtccccctgttgtgctatcaaatagtatgtcttattcattccttttgcctatttttgtacccattacccatcccctg---ccttcctccc-cagccccctagtacttactatgtccatgagttcaattgttttgattttt-agatcccgcaaataagtgagaacatgcaatgtctgcctttccgtgcttggcttatttcccttaacataatgatctccagttccttccctgttgttgcaaatgactgaatctcattcttttttagggctgaataatactccactgtgtgtatctaccagattttctttaatacattaagctgttgatggacacttaggttgcttccaaatcttagctattgtcaac-agtggtgcaaccaacatgggagtgcagataatttcttcgatacactcatttcctatttttggggtatatacccaacagtgggattgctggatcatgtggtacctctattttcagtgtttagaggaacctccaaactgttctccaccgtggctgtaccagtAGTACCTTAAAATGGAAATGCAATTGGT---AAAAGAACAAGGCAGCATGTAGTA-CTTGCACTTACAAATACTACCAGTTTCGTAACAATTTGCA---------TTTTTTTTTTTTGTTCTTGGAAGAGTAACC----ACTTAATAAAACAGATACATAAAAGCACAATATTCCTTCCTTTGCAGGGCATCCAGGAATGGTGAAAGCAAAG-AA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40767292 739 + 122973662 aatccaattacattcttttagttatttttaaatgtataattattgactagagtccccctgttgtgctatcaaatagtatgtcttattcattccttctgcctatttttgtacccgttacccatcccctg---ccttccccac-cagccccctagtacctactatgtccgtgagttcaattgttttgattttt-----------gataagtgacagcatgcaatgtctgcctttctgtgcttggcttgtttcctttaacataatgatctccagttccttccatgttgttgcaaatgactgaatctcattcttttttagggctgaataatactccactgtgtatatctaccacattttctttaatacattaatctgtcgatggacacttaggttgcttccaaatcttagctgttgtcaac-agtggtgcaaccagcatgg-------------------gacatactcatttcctattttgggggtatatacccaacagtgggattgctggatcatgtggtacctctattttcagtgtttagaggaacctccaaactgttctccaccgtggctgtaccagtAGTACTTTAAAATACAAATGCAATTGGT---AAAAAAACAAGGCAGCATGTAGCA-CTTGCACTTACAAATACTACCAGTTTTGTAACAATTTGCA-----------TTTTTTTTTGGTCCTTGGAAGAGTAACC----ACTTAATAAAACAGATACATAAAAGCGCAATATTCCTTCCTTTGCAGGGCATCCAGGAATGGTGAAAGCAAAGAAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3866894 780 - 112192347 aatccaattactttcttttagttgtttttaaatgtacaattattgactagagtccccctgttgtgctatcaaatagtatgtcttattcattccttccgactatttttgtacccattacccatcccctg---ccttcccccg-caaccccctattacctattatgtccatgagttcaattgttttgattttttagatcccacaagcaagtgagaacatgcaatgtcagcctttctgtgcctggcttatttcccttaacagaatgatctccaattccttccatgttgctgcaaatgactgaatctcattcttttttatggctgaataatactccactgtatatatctaccgcattttctttaatacattaatttgttgatggacacttaggttgcttccaaatcttagctattgttaac-agtggtacaaccaacatggaagtgcagat-atttcttagatatagtcatttcctattttgggggtatatacccagcagtgggattgctggatcatgtggtacctctattttcagtgtttagaggaacctccaaactgctctcccccatggctgtaccagtAGTACCTTAAAATGCAAATGCAACTGGTAAAAAAAAAGCAGGACAGCATGTAGTA-TTTGCACTTACAAATCCTACCAGTTTCATAACAATCTGCA--TTTTTTTTTTTTTTTTTTGGTCCTTGGAAGAGTAACC----ACTTAATAAAACAGATACATAAAAGCGCAATATTCCTTCCTTTGCATGGCATCCAGGAATGGTGAATGCAAAGAAA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3948510 781 - 112612857 aatccaattactttcttttagttgtttttaaatgtacaattattgactagagtccccctgttgtgctatcaaatagtatgtcttattcattccttccgactatttttgtacccattacccatcccctg---ccttcccccg-caaccccctattacctattatgtccatgagttcaattgttttgattttttagatcccacaagcaagtgagaacatgcaatgtcagcctttctgtgcctggcttatttcccttaacagaatgatctccaattccttccatgttgctgcaaatgactgaatctcattcttttttatggctgaataatactccactgtatatatctaccgcattttctttaatacattaatttgttgatggacacttaggttgcttccaaatcttagctattgttaac-agtggtacaaccaacatggaagtgcagat-atttcttagatatagtcatttcctattttgggggtatatacccagcagtgggattgctggatcatgtggtacctctattttcagtgtttagaggaacctccaaactgctctcccccatggctgtaccagtAGTACCTTAAAATGCAAATGCAACTGGT-AAAAAAAAGCAAGACAGCATGTAGTA-TTTGCACTTACAAATCCTACCAGTTTCATAACAATCTGCAtttttttttttttttttttttGTCCTTGGAAGAGTAACC----ACTTAATAAAACAGATACATAAAAGCGCAATATTCCTTCCTTTGCATGGCATCCAGGAATGGTGAATGCAAAGAAA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3746493 780 - 107442819 aatccAATTActttcttttagttgtttttaaatgtacaattattgaCTAGAGtccccctgttgtgctatcaaatagtatgtCTTATCCATTCCTTCTgactatttttgtacccattaccCATCCCCTG---CCTTcccccc-caacccccTATTACCTattatgtccatgagttcaattgttttgattttttagatcccacaagtaagtgacaacatgcaatgtcagcctttctgtgcctggcttatttcccttaacagAATGATCTCCAATtccttccatgttgctgcaaatgactgaatctctttcttttttatggctgaataatactccactgTATATATCTACCGCATTTTCTTTAATACATtaatttgttgatggacacttaggttgcttccaaatcttagctattgttaAC-AGTGGTACAAccaacatggaagtgcagat-atttcttaGATATAGTCATTTCCTATTttgggggtatatacccagcagtgggattactggatcatgtgGTACCTCTATTTTCAGTGTTtagaggaacctccaaactgctctccCCCATGGCTGTACCAGTAGTACCTTAAAATGCAAATGCAACTGGT--aaaaaaaaCAAGACAGCATGTAGTA-TTTGCACTTACAAATCCTACCAGTTTCATAacaatctgcatttttttttttttttttttttgtccttggaAGAGTAACC----ACTTaataaaacagatacataaaagCGCAATATTCCTTCCTTTGCATGGCATCCAGGAATGGTGAATGCAAAGAAA i papAnu2.chr15 I 460 C 0 s chlSab2.chr12 108549160 777 + 108555830 aatccaattactttctttcagttgtttttaaatgtacaattattgactagagtccccctgttgtggtatcaaacagtatgtcttattcattccttctgactatttttgtacccattacccatcccctg---ccttcccctgccaaccccctattaactaatatgtccatgagttcaattgttttgattttttagatcccacaagtaagtgagaacatgcaatgtcagcctttctgtgcctggcttatttcccttaacagaatgatctccagttccttccacgttgttgcaaatgactgaagctcattcttttttatggctgaataatactccactgtgtatatctaccacattttctttaatacataaatttgttgatggacacttagagtgcttccaaatcttagctattgttaac-agtggtgcaaccaacaaggaagtgcagat-atttcttagatatagtcatttcctattttgggggtatatacccagcagtgggatggctggatcatgtggtacctctattttcagtgtttagaggaacctccaaactgctctcccccatggctgtaccagtAGTACCTTAAAATGCAAATGCAATTGGT--AAAAAAAACAAGGCAGCATGTAGTATTTTGCACTTACAAATACTATCAGTTTCATAACAATCTGCA-----TTTTTTTTTTTTTTTTGTCCTTGGAATAGTAACC----ACTTAATAAAACAGATACATAAAAGCGCAATATTCCTTCCTTTGCATGGCATCCAGGAATGGTGAAAGCAAAGAAA i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=3600.000000 s hg38.chrUn_GL000218v1 52424 1 + 161147 C s panTro4.chr2A 18582302 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820774 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768031 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867674 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3949291 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747273 1 - 107442819 C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108549937 1 + 108555830 C i chlSab2.chr12 C 0 C 0 s saiBol1.JH378130 1196007 1 - 24403887 C i saiBol1.JH378130 N 0 I 26 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=42516.000000 s hg38.chrUn_GL000218v1 52425 20 + 161147 AGTCATCCCTTCTCTTCCCC s panTro4.chr2A 18582303 20 - 113622374 AGTCATCCCTTCTCTTCCCC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820775 20 + 72422247 AGCCATCCCTTCTCTTTCCC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768032 15 + 122973662 AATCAACCCTTC-----CCC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867675 20 - 112192347 AGTCATCCCTTCTCTTCCCC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3949292 20 - 112612857 AGTCATCCCTTCTCTTCCCC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747274 20 - 107442819 AGTCATCCCTTCTCTTCCCC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108549938 20 + 108555830 AGTCATCCCTTCTCTTCCCC i chlSab2.chr12 C 0 C 0 e saiBol1.JH378130 1196008 26 - 24403887 I e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=3600.000000 s hg38.chrUn_GL000218v1 52445 1 + 161147 C s panTro4.chr2A 18582323 1 - 113622374 C i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820795 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768047 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867695 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3949312 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747294 1 - 107442819 C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108549958 1 + 108555830 C i chlSab2.chr12 C 0 C 0 s saiBol1.JH378130 1196034 1 - 24403887 C i saiBol1.JH378130 I 26 N 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=230105.000000 s hg38.chrUn_GL000218v1 52446 97 + 161147 CACTTCTGGTCTCCCGAAATAGGAATGCCAGGTCAGACAGGTGGAGGAGGGAAATGGGGCACAGGTCAAGGTATGATGAATCTCTTAAAAAGAAATC s panTro4.chr2A 18582324 97 - 113622374 TACTTCTGGTCTCCCGAAATAGGGACACCAGGTCAGACAGGTGGAGGAGGGAAATGGGGCACAGGTCAAGGTATGATGAATCTCTTAAAAAGAAATC i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820796 92 + 72422247 CACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTGGAGGAGGGAAATGGGGCACAGGTCAAGGTATGATGAATCTCTT-----GAAATC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768048 97 + 122973662 AACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTGCAGGAGGGAAATGGGGCACAGGCCAAGGTATGATGAATCTCTTAAAAAGAGATC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867696 97 - 112192347 CACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTAGAGGAGAGAAATGGGGCACAGGGTAAGATATGATGAATCTCTTAAAAAGAAATC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3949313 97 - 112612857 CACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTAGAGGAGAGAAATGGGGCACAGGGTAAGATATGATGAATCTCTTAAAAAGAAATC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747295 97 - 107442819 CACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTAGAGGAGAGAAATGGGGCACAGGGTAAGATATGATGAATCTCCTAAAAAGAAATC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108549959 97 + 108555830 CACTTCTAGTCTCCCGAAATAGGGACGCCAGGTCAGACAGGTGGAGGAGAGAAATGGGGCACAGGGTAAGATATGATGAATCTCTTAAAAAGAAATC i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=443.000000 s hg38.chrUn_GL000218v1 52543 1 + 161147 C s panTro4.chr2A 18582421 1 - 113622374 T i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820888 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768145 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867793 1 - 112192347 C i rheMac3.chr15 C 0 I 1 s chlSab2.chr12 108550056 1 + 108555830 C i chlSab2.chr12 C 0 I 1 e papAnu2.chr15 3747392 0 - 107442819 C e macFas5.chr15 3949410 0 - 112612857 C e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=129409.000000 s hg38.chrUn_GL000218v1 52544 303 + 161147 ggccaggcgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcgggcggatcacgaattcagga-atcgagaccatcctggagaacacggtgaaacaccgtctcaactaaaaatacaaaaaaattagccgtgtgtggtggcggacgcctgtagtcccagctact-gggaggctggggctggagaatggcataaacccgagggg-ctgagcttgcagtgagcggagatggcgccactgcattccagcctgggcgacagagtgagacaccttc-------cccccaccgccaaaaaaaaaaaaTA------------ s panTro4.chr2A 18582422 300 - 113622374 ggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggccgagatgggcggatcacgagatcagga-atcgagaccatcctggtgaacacagtgaaaccccgtctctactaaaaatacaaaaaaattagcccggcgtggtggcgggtgcctatagtaccagctagt-cggaggctggggcatgagaatggcatgaacccgagggg-cagagcttgcagcgagtggagatggcgccactgcactccagcctgggcgacagagcgagactccatc-------ccccccccacaaaaaaaaaaCA--------------- i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11820889 309 + 72422247 ggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcagga-atcgagaccatcctggagaacacggtgaaaccccgtctctactaaaaatacaaaaaaattagccgggcgtggtggcgggcgcctatagtcctagctact-gggaggctggggcaggagaatggcgtgaacccgagagg-gggagcttgcagtgaggcaagatcgcaccactgcattccagcctgggcaaca-agcgagactccgtTCCCCCCACCCCCCCCCCAAAAAAAGAAAAACA------------ i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768146 313 + 122973662 Agccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcgggagatcgagaccatcatggcgaacacggtgaaaccccgtctctactaaaaatacaaaaaaattaacctggcatggtggcgggcgcctgtagtcccagctactggggaggctggggcaggagaatggcatgaacccggggggacggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcgacagagcgagact------------ccctctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaT i nomLeu3.chr1a C 0 C 0 e chlSab2.chr12 108550057 1 + 108555830 I e papAnu2.chr15 3747392 0 - 107442819 C e macFas5.chr15 3949410 0 - 112612857 C e rheMac3.chr15 3867794 1 - 112192347 I e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=-1220.000000 s hg38.chrUn_GL000218v1 52847 3 + 161147 CAG s nomLeu3.chr1a 40768459 3 + 122973662 CCA i nomLeu3.chr1a C 0 C 0 s macFas5.chr15 3949410 2 - 112612857 CA- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747392 2 - 107442819 CA- i papAnu2.chr15 C 0 C 0 e chlSab2.chr12 108550057 1 + 108555830 I e rheMac3.chr15 3867794 1 - 112192347 I e tarSyr2.KE939781v1 776153 2433 + 842509 I e ponAbe2.chrUn 11821198 0 + 72422247 C e panTro4.chr2A 18582722 0 - 113622374 C a score=390586.000000 s hg38.chrUn_GL000218v1 52850 173 + 161147 CTTTCCCCAGAATGCTAGCCTGATAGGAACTCCACCCCATCCATTCCAACCTAGTAAGGATAGTTTAGTTTGTCTTTTCTGGTCTCACTTCATT----ACATCTAGTGTTCTTTTTTTGTTTCTGTTATTAAATTTCAGAAGACAAACCTTAGCATTTTCTAAAAGAAATTATTTTT s panTro4.chr2A 18582722 172 - 113622374 CTTCGCCCAGAATGCTAGCCTGATGGGAACTCCACCCCATCCATTCCAACCTAGTAAGGATAATTTAGTTTGTCTTTTCTGGTCTCACTTCCTTACTGACATCTAGTGTTTTTTTTTT-----TGTTATTAAATTTCAGAAGACAAACTTTAGCATTTTCTAAAAGAAATTATTTTT i panTro4.chr2A C 0 I 10 s ponAbe2.chrUn 11821198 172 + 72422247 GTTTCCCCAGAATGCTAGCCTGATGGGAACTCCACCCCATCCGTTCCAACCTAGTAATGAAAAGTTAGTTTGTCTTTTCTGGTCTCACTTCGTTACACACATCTAGTGTTCTTTTTTTGTTTCTGTTATTAAATTTCAGAAG----ACCTCAGCATTTTCTAGAAGAAATAATTTT- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768462 174 + 122973662 CTTTCCCCAGAATGCTAGCCTGATGGGAACTCCGCCCCATCCATTCCAACCTAGTAAGGATAGTTTAGTTTGTCTTTTCTGGTCTCACTTCCTTGCTCACATCTAGTGTTCTTTTTTTGTTTCTGTTATTAAATTTCAGAAA---AACTTTAGCATTTTCTAAAAGAAATTATTTTT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867795 172 - 112192347 CTTTCCCCAGAATGCTAGCCTGATGGGAACTCCGCCCCATCCATTCCAACCTAGTAAGAATAATTTAGTTTGTATTTTCTGGTCTCACTTCCTT----ACATCTAGTGTTCTTTTTTCGTTTCTGTTATTAAATTTCAGAAGACAAACCTTGGCATTTTCTAAAAGAAATTATTTT- i rheMac3.chr15 I 1 C 0 s macFas5.chr15 3949412 172 - 112612857 CTTTCCCCAGAATGCTAGCCTGATGGGAACTCCGCCCCATCCATTCCAACCTAGTAAGGATAATTTAGTTTGTATTTTCTGGTCTCACTTCCTT----ACATCTAGTGTTCTTTTTTCGTTTCTGTTATTAAATTTCAGAAGACAAACCTTGGCATTTTCTAAAAGAAATTATTTT- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747394 172 - 107442819 CTTTCCCCAGAATGCTAGCCTGATGGGAACTCCGCCCCATCCATTCCAACCTAGTAAGGAtaatttagtttgtattttctggtCTCACTTCCTT----ACATCTAGTGTTCTTTTTTCGTTTCTGTTATTAAATTTCAGAAGACAAACCTTggcattttctaaaagaaattatttt- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108550058 172 + 108555830 CTTTCCCCAGAATGCTAGCCTGATGGGAACTCCGCCCCATCCATTCCAACCTAGTAAGGATAATTTAGTTTGTATTTTCTGGTCTCACTTCCTT----ACATCTAGTGTTCTTTTTTCGTTTCTGTTATTAAATTTCAGAAGACAAACCTTAGCATTTTCTAAAAGAAATTATTTT- i chlSab2.chr12 I 1 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=1052093.000000 s hg38.chrUn_GL000218v1 53023 603 + 161147 TACCTAAATACATTGGACTTTGGTCTTAATTTGAAGGAATAGGATAAGTGGACTTTAAGAGAGCGTTCCTACTCCTTCTCTTCCAGTGGCTGCTCTGGGTCCTTGAAAGAGGGTGTGATATGAACCATCTGGGTTGTGAAGTGGATTTTGTTGAGCCTGTGTTTTTTAAGTCCATTAGTCCTGCCCGAGGCTGTGCGCCTTGGAATCCTTGGCTTCACGTCTGGACCACCTTCAGCCAAGTGGTGATGGTGGAGAGGGTCCCCCCATCTTCCAGGACGTGTGAGAGTTTGTAGGTGGTGAGATGGAGGGGGCAGCTTTTAAATCTTCCAGTACTCACCCCCGCTGCTGGCGGTGCTCTCCCCATCGTCCTTGTCCAGGACTCCCATCAGGGTCTC-AATCTCTTCTGTGATGCTCTGACTCACATGCTGGGAGGCCCTTTTCCCAGTGTAGTCCCTGATGTCAACATCGGCGTCCTATGTTCCCACTAGCAGCTTCACCATCTCCAAGGTACATGGCTGCCAAGTGCAGGGCGGTGTAGC---------TCTGGCCTTGCTGTTCCCAGGCAGCAGAGGCTCGTTGGGGAAGTTGACCAGCATGGCCAGAAGC s ponAbe2.chrUn 11821370 601 + 72422247 TACCTAAATACATTGGACTTTGGTCTTAATTTGGAGGAATAGGATAAGTGGCCTTTAAGAGAGCGTTCCTACTC---CTCTTCCAGTGGCTGCTCTGGGTCCCTGAA--AGGGTGTGATGTGAAGCATCCTGGTTGTGAAGTGAATTTTGTTGAGCCTGTGTTTTTCAAGTCCGTTAGTCCTGCCCGAGACTGTGCGCCCTGGAATCCTTGGCTTTGCCTCTGGACCACCTTCAGCCAAGTGGTGATGGTGAAGAGGGTCCCCCCATCTTCCAGGACGTGTGAGAGTTTGTAGGTGATGAGATGGAGGGGGCACCTTTTAAATCTCCCAGTACCCACCCCC------GACGGTGCTCTCCCAGTCGTCCTCGTCCAGGACTCCCACCAGGGTCTC-GATCTCCTCTGTGATGCTCTGACTCACATACTGGGAGGCCCTTTTCCCAATGTAGTCCCTGATGTCCACATCGGCGTCCTAGGTCCCCACTAGCAGCTTCACCATCTCCAAGGTACATGGCTGCCAAGTGCAGGGCGTTGTAGCCCTGCTTGTCCTGGCCTTGCTGTTCCCAGGCAGCGGAGGCTCGTTGGGGAAGTTGACCAGCATGGCCAGAAGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40768636 612 + 122973662 -ACCTAAATACATTGGACTTTGGTCTTCATTTAAAGGAATAGGATAAGTGGCCTTTAAGAGAGCATTCCTCCTCTTCCTCTTCCAGTGGCTGCTTTGGGTCCCTGAAAGAGGGTGTGATGTGAACGATCTGGGTTGTGAAGTGGGTTTTGTTGAGCCTGTGTTTTTTAAGTCCATTAGTCCTGCCCAAGGCTGTACGCCCCGGAATCCTTGGATTCGCCTTTGGACCACCTTCAGCCAGGTGGTGATGGTGAAGAGGGTCCCCCCATCCTCCAGGACGTGTGAGAGTTTGTAGGTGATCAGATGGAGGGGGCACCTTTTAAATCTTTCAGTACCCACCCCTGCTGTTGGCGGTGCTCTCCTCGTTGTCCTCGTCCAGGACTCCCACCGGGGTCTCGGATCTCCTCTGTGATGCTCTGACTCACATACTGGGAGGGCCTTTTCCCAGTGTAGTCCCTGATGTCCACATCGGCGTCCTAGGTCCCCACTAGCAGCTTCACCATCTCCAAGGTACATGGCTGCCAAGTGCAGGGCGGTGTAGCCCTGCTCGTCCTGGCCTTGCTGTTCCCAGGCAGCGGAGGCTCGTTGGGGAAGTTAACCAGCATGGCCAGAAGC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3867967 612 - 112192347 TACCTAAATACATTGGACTTTGGTCTTAATTTGAAGGAATAGGATAAGTGGCCTTTAGGAGAGCGTTCCTCCTCCTCCTCTTCCAGTGGCTGCTCTGGGTCCCTGAAAGAGGGTGTGATGTGAACCATCTGGGTTGTGAAGTGGATTTTGTTGAGCCTGTGTTTTTTAAGCCCATTAGTCCTGCCCGAGGCTGTGTGCTCTGGAATCCTTGGTTTCGCCTCTGGACAACCTTCAGCCAAGTGGTGACGGTGAAGAGGGTCCCCCCATCCTCCAGGATGTGTGAGAGTTTGTAGGTGATGAGATGGAGGGGGCACCTTTCAAATCTT-CAGCGCCCACCCCCGCTGCTGGCGGTGCTCTCCCCGTCGTCCTCGTCCAGGGCTCCCAGCAGGTTCTCGGATCTCCTCTGTGATGCTCTAACTCACATACTGGGAGGCCCTTTTCCCAGTGTAGTCCCTAATGTCCATATCGGCGTCCTAGGTCCCCACTAGCCGCTTCGCCATCTCCAAGGTACACGGCTGCCACGTGCAGGGCGGTGCAGCCCTGCTGGTCCCGGCCTTGCTGTTCCCAGGCAGCGGAGCCTCCCCGGGGAAGGTGACCAGCACGGCCAGGAGC i rheMac3.chr15 C 0 I 584 s macFas5.chr15 3949584 612 - 112612857 TACCTAAATACATTGGACTTTGGTCTTAATTTGAAGGAATAGGATAAGTGGCCTTTAGGAGAGCGTTCCTCCTCCTCCTCTTCCAGTGGCTGCTCTGGGTCCCTGAAAGAGGGTGTGATGTGAACCATCTGGGTTGTGAAGTGGATTTTGTTGAGCCTGTGTTTTTTAAGCCCATTAGTCCTGCCCGAGGCTGTGTGCTCTGGAATCCTTGGTTTCGCCTCTGGACCACCTTCAGCCAAGTGGTGTCGGTGAAGAGGGTCCCCCCATCCTCCAGGATGTGTGAGAGTTTGTAGGTGATGAGATGGAGGGGGCACCTTTCAAATCTT-CAGCACCCACCCCCGCTGCTGGCGGTGCTCTCCCCGTCGTCCTCGTCCAGGACTCCCAGCAGGTTCTCGGATCTCCTCTGTGATGCTCTAACTCACATACTGGGAGGCCCTTTTCCCAGTGTAGTCCCTAATGTCCATATCGGCGTCCTAGGTCCCCACTAGCCGCTTCGCCATCTCCAAGGTACACGGCTGCCACGTGCAGGGCGCTGCGGCCCTGCCGGTCCCGGCCTTGCTGTTCCCAGGCAGCGGAGCCTCCCCGGGGAAGGTGACCAGCACGGCCAGAAGC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3747566 611 - 107442819 tacctaaatacattggactttgggcTTAATTTGAAGGAATAGGATAAACGGCCTTTAGGAGAgcgttcctcctcctcctcttccagtgGTTGCTCTGGGTCCCTGAAAGAGggtgtgatgtgaaccatctggGTTGTGAAGTGGATTTTGTTGAGCCTGTGTTTTTTAAGTCCATTAGTCCTGCCCGAGGCTGTGTGCCCTGGAATCCTTGGTTTCGCCTCTGGACCACCTTCAGCCAAGTGGTGACGGTGAAGAGGGTCCCCCCATCCTCCAGGATGTGTGAGAGTTTGTAGGTGATGAGATGGAGGGGGCACCTTTCAAATCTT-CAGCACCCACCCCCGCTGCTGGCGGTGCTCTCCCCGTCGTCCTCGTCCAGGACTCCCAGCAGGTTCTCGGATCTCCTCTGCGATGCTCTAACTCACACACTGGGAGGCCCTTTTCCCAGTGTAGTCCCCAATGTCCATATCGGCGTCCTAGGGCCCCACTAGCCGCTTCACCATCTCCAAGGTACACGGCTGCCACGTGCAGGGCGCTGCAGCCCTGCGGGTCCCGGCCTTGCTGTT-CCAGGCAGCGGAGCCTCCTTGGGGACGCCGACCAGCACGGCCAGAAGC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108550230 610 + 108555830 TACCTAAATACATTGGACTTTGGTCTTAATTTGAAGGACTAGGAGAAGCGGCCTTTAGGAGAGCGTTCCTCCTCCTCCTCTTCCAGTGGCTGCTCTGGGTCCCTGAAAGAGGGTGTGATGCGAACCATCTGGGTTGTGAAGTGGATTTTGTTGAGCCTGTGTTTTTTAAGTCCATTAGTCCTGCCCGAGGCTGCGTGCCCTGGAATCCTTGGTTTCGCCTCTGGACCACCTTCAGCCAAGTGGTGACGGTGAAGAGGGGCCCCCCGTCCTCCAGGATGTGTGAGAGTTTGTAGGTGATGAGATGGAGGGGGCACCTTTCAAACCTTCCAGCACCCACCCCCGCTGCTGGCGGTGCTCTCCCCGTCGTCCGCGTCCAGGACTCCCAGCAGGTTCTCGGATCTCCTCTGTGATGCTGTAACTCACCTACTGGGAGGCCCTTTTCCCA-TGTAGTCCCTAATGTCCACATCGGCGTCCTAGGTCCCCACCAGCCGCGTCACCATCTCCAAGGTAC-TGGCTGCCACGTGCAGGGCGGTGCAGCCCCGCTGGTCCCGGCCTTGCTGTTCCCAGGCCGCGGAGCCTCCTTGGGGAAG-TGACCAGCTCGGCCAGAAGC i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I e panTro4.chr2A 18582894 10 - 113622374 I a score=539688.000000 s hg38.chrUn_GL000218v1 53626 630 + 161147 TCCAGCCTGCAGTGCTAGGTGCCTGCGCAGGCAGGTGAGGGTGTGATGAAGCCCAGAGTGGCCAGCAGGCTGGCTGGCACGGGGGCAACCCCCTAAGCTGTCCACTCCCCATCGGAGGCCGAGAGCAGCCAGCTGTGCTCCCTGGTCCAGCTCACCCAGCCCCACAGCT---CTCCTCTGCGGACGGGAAAGCCAGCGCTGCGCCGCCAGAGTCACTCGCCTCTGCGGTGTCCTCAGAGGAGGAGCTCCCAGGCTGCTGCCTCCAGGACACAGGTTCCTCTTCAAGGGCAGGACACTGTGCCTTCCCAAGTCGCTCAAGTTCTGGC----GGAACGGCCTCGAGGTGGTAGCCCCCC-AGGAgccgcccctgtccgcctcctggcaaccgtggggtgggggctccaggtccttgct-ggTCTGAGGTCCCGCATCTGGGGTAGGGGCTGGTGGAGCCAGCGAGCTCTTCCTGCGTCCCCGCTGCTCAGGGCGGCCCGTGCAGGGGCTGGGCTCCCCCTTGCCCAGCTCGGCCCTGCCTGTGGAGCACCTCGGGGACCGCTGTTTCAGGGAGGGGATGGTGAATGCTGCGCTCCGCATTCACGTGGACGCGGGACAGGTCCCAGGGGCGCGGCCTCAGGC s ponAbe2.chrUn 11821971 632 + 72422247 TCCAGCCTGCGGTGCTAGGCGCCTGCCCAGGCAGGTGAGGCGGTGATAAAGCCCAGCGTGGCCAGCAGGCCGGCTGGCACGGGGGCAACCCCTTAAGCTGTCCACTCCCCATCGGAGGCCGAGAGCAGCCAGCCGTGCTCCCGGGTCCAGCTCACCCAGCCCCGCAGCTCTCCTCCTCCGCGGACGGGAAAGCCAGCGCTGCGCCGCCAGAGTCACTCTCCTCTGCGGTGCCCTCGGAGGAGGAGCTCCCAGGCTGCTGCCTCCAGGACACACGCTCCTCTTCAGGGGCGGGGCTCTGCCCCTTCCCAAGTCGCTCAAGTTGTGGC----GGAACGGCCTCGGGGCGGTAGCCCCCC-AGGAGCTGCCTCTGTCCGCCTCCTGGCAGCCGTGGGGCGGCGGCTCCTGGTCCTCGCT-GGCCCCAGGTCCCGCGTCTGGGGTACGGTCTGGTGGAGCCGGCGAGCTCTTCCTGCGTCCCCGCCGCTTAGGGCGGCCCGTGCAAGGGCTGGGCTCCCCCTCGCCCAGCTCGGCCCTGCCTGTGGAGCGCCTCGGGGACCGCTGTTTCAGGGAGGGGATGGTGAATGCTGCGCTCCGCGTTCACGTGGACGCGGGACA-GTCCCAGGGGCGCGGCCTCAGGC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40769248 632 + 122973662 TCCAGCCTGCGGTGCTAGGCGCCCGCGCAGGCAGGTGCGGCTGTGATGAAGCCCAGCGTGGCCAGCAGGCCGGCTGGCACGGGAGCAACTCCCTAAGCTGTCCACTCCCCATCGGAGGCC-AGAGCAGCCAGCCGCGCTCCCGGGCCCAGCTCACCCAGCCCCGCAGCTCTCCTCCTCCGCGGTCGGGAAAGCCAGCGCTGCGCCACCAGAGTCACTTGCCTCTGCCCTGTCCTCCTCGGAGGAGCTCCCAGGCTGCTGCCTCCAGGACACACGCTCCTCTTCAGGGGCGGGGCGCTGCCCCTTCCCAAGTCGCACAAGTTCTGGC----GGAACGGCCTCGGGGCGGTAGCCCCCCAAGGAGCTGTCCCTGTCCgcctcctggcagccgtggggcggggactccaggtcctcgctgggcccTAGGTCCGGCGTCTGGCGTAGGGGCTGGT-GAGCCAGCGAGCTCTT-CTGCGTCCCCGCCGCTCAGGGCGGCCCATGCAGGGGCTGGGTTCCCCCTCGCCCAGCTCGGCCTTGCCTGTGGAGCGCCTCGGGGACCGCTGTTTCAGGGAGGGGATGGTGAATGCTGCGCTCCGCGTTCCCGTGGACGCGGGACAGGTCCCAGGGGTGCTGCTTCAGGC i nomLeu3.chr1a C 0 C 0 s macFas5.chr15 3950196 596 - 112612857 TCCCGCCCGCGGTGCCAGGCGCCCGCGCGGGCAGGTGCGGCGGAGATGCAGCCCAGCGCGGCCGGC-----GGCCGGCCCAGGAGCAACCCTCTAAGCTGTCCACTCCCCATCGACGGCCGAGAGCAGCCAGCCGCGCTCCCGGGTCCGGCTCACCCAGCCCCGCCGCTCTCCGGCTCCGCAGACGGGAGG-CCAGCGCGGGGCCGCCGGAGTCACCGGCCTCTGGCGGGTCCTCCCCGGAGCAGCTCCCCGGCTGCGGCCTCCAGGACACGCGCTCCCCTGCGGGGGCCGGGCGCTGCCCCTTCTCAAGTCGCGCAAGCTCGGGCGGAACGAACGGCCTCGGGGCGGCGGCTCTGG-AGGGGCTG-CCCTGTCCGCCTCCCGGCAGCCGCGGG----------CGGGTCCC---A-GGTCCCGGGTCCC-CGTCTGGGGCAGGCGCTGGCGGAGCCGG-GAGTCCCTCCTGCGTCCCCGCGGCTCAGGGCGGCCCGTGCGGGGACCGGGCT-CCCCTCGCCCGGCTGGGCCCTTCCCGCGGAGCGCCTCGGGA--CGCTGTTTCGGGGAGGGCGCGGCGGCTCCTGCGCTGCGTGGTC-CGTGGACGCGGGACGGGCCCCGGG--------------- i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748177 542 - 107442819 TCCCGCCCGCGGTGCCA----------------------------------------------GGC-----GGCCGGCACAGGAGCCACCCTCGAAGCCGTCCACTCCCCATGGAAGGCCGCGAGCAGCCCCCCGCGCTCCCGGGTCCGGCTCACCCAGCC----------------CCGCAGACGGGAGG-CCAGCGCGGGGCCGCCGGAGTCACTGGCCTCTGGCGCGTCCTCCCCGGAGCAGCTCCCCGGCTGCTGCCTCCAGGACACGC-CTCCCCTCCGGGGGCCCCGCGCTGCCCCTTCTCCAGTCGCGCAAGCTCCGGCGGAACTGACGGCCTCGGGGCGGCGGCTCTgg-gggggCTG-CCCTGTCCGCCTCCCGGCAGCCGCGggtcccaggtcccaggtccc---a-ggtcccaggtccc-CGTCTGGGGCAGGCGCTGGTGCAGCCGG-GAGTCCCTCCTGCGTCCCCGCGGCTCAGGGCGGCCCGTGCGGGGACCGGGCT-CCCCTCGCCCGGCTGGGCCCTTCCCGTGGAGCGCCT-GGGA--CGCTGTCTCGGGGAGGGCGCGGCGGCTCCTGCGCTCCGTGGTC-CGTGGACGCGGGACGGGCCCCGGG--------------- i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108550840 574 + 108555830 TCCCGCCCGCGGTGCCCGGCGCCCGCGCAGGCAGGTGCGGCGGTGATGCAGCCCAGCGTGGCCGGC-----GGCCGGCACAGGAAAAACCCTCTAAGCTGT-CGCTCCCCATCGAAGGCCGAGCGCCGCCAGCCGTGCTCCCGGGTCCGGCTCACCCAGCCCCGCCGCTCGCCCGCTCCGCAGACGGGAGG--CAGCGCGGGGCCGCCGGAGTCACTGGCCTCTGGCGTGTCCTCCTCGGAGCAG--CCCCGGCCGCTGCCTCCAGGACACACGCTCCCCTTCAGGGGCC-GGCGCTGCCCCTTCTCAAGTCGCGCAAGCTCCGGC----CGAACGGCCTCGGGGCGGCGGCTCTGG-GG----------------------GGCAGCCGCGGG--CGGGGCTCCAGGTCCTCG-C-GGGTCCAGGTCCC-CGTCTGGGGCAGGCGCTGGTGGAGCCGG-GAGCCCCTCCTGCGTCCCCGCCGCTCAGGGCGGCCCGTGCGGGGACC-AGCT-CCCCTCGCCCAGCTGGGCCCTT-CCGTGGCGCGCCTCGGGA--CGCTGTTTCGGGGAGGGCGCGGCGGCTCCTGCGCTCCGTGGTC-CGTGGACGCGGGACAGGTCCCGGG--------------- i chlSab2.chr12 C 0 C 0 e rheMac3.chr15 3868579 584 - 112192347 I e tarSyr2.KE939781v1 776153 2433 + 842509 I e panTro4.chr2A 18582894 10 - 113622374 I a score=193284.000000 s hg38.chrUn_GL000218v1 54256 121 + 161147 GGAGGCCCCGCCAGAACCTCTTCCTGAGACGCAGGTACTGGGCGCCATCGACGGGGTCCGTGCAGTGGCCACAGCGTTCACCCGGAGATACATTTAAACAGTTTTATTCTCCTGTTTTTTA--------- s ponAbe2.chrUn 11822603 118 + 72422247 GGAGGCCCCGCCAGAACCTCTTCCTGAAACGCAGGTACTCGGCGCCATTGGCGGGGTCGGTGCAGTGGCCACAGCGTCCACCCGGAGATACATTTAAACAGTTTTATTCTCCTGTTTT------------ i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40769880 119 + 122973662 GGAGGCCCCGCCAGAACCTCTTCCTGAGACGCAGGTACTCGGCGCCATCGGCGGGGTCGGTGCAATGGCCACAGCGTCCACTCGGAGATACATTTAAACAGTTTTATTCTCCTGGTTTT----------- i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869163 130 - 112192347 GGAGGCCCCGCCAGAACCTCTTCCTGAGACGCGGGTACTCGGCGCCATCGGCTGGGTCGGTGCCGTGGCCACAGCGTCCACCCGGAGACACATTTAAACAGttttattctcctgtttattcttattttta i rheMac3.chr15 I 584 I 1 s macFas5.chr15 3950792 130 - 112612857 GGAGGCCCCGCCAGAACCTCTTCCTGAGACGCGGGTACTCGGCGCCATCGGCTGGGTCGGTGCCGTGGCCACAGCGTCCACCCGGAGACACATTTAAACAGttttattctcctgtttattcttattttta i macFas5.chr15 C 0 I 1 s papAnu2.chr15 3748719 130 - 107442819 GGAGGCCCCGCCAGAGCCTCTTCCTGAGACGCGGGTACCCGGCGCCATCGGCTGGGTCGGTGCCGTGGCCACAGCGTCCACCCGGAGACACATTTAAACAGTTTTATTCTCCTGtttagtcttattttta i papAnu2.chr15 C 0 I 1 s chlSab2.chr12 108551414 107 + 108555830 GGAGGCCCCGCCAGACCCTCTTCCTGAGACGCAGGTACTCA-----------------------GTGGCCACAGCGTCCACCCGGAGATGCATTTAAACAGttttattctcctgtttattcttattttta i chlSab2.chr12 C 0 I 2 e tarSyr2.KE939781v1 776153 2433 + 842509 I e panTro4.chr2A 18582894 10 - 113622374 I a score=85610.000000 s hg38.chrUn_GL000218v1 54377 34 + 161147 TTTTTTCATTCCAGAAACCATTACTACTATGCAA s panTro4.chr2A 18582904 34 - 113622374 TTTTTTCATTCCAGAAACCATTACTACTATGCAA i panTro4.chr2A I 10 C 0 s ponAbe2.chrUn 11822721 34 + 72422247 TTTTTTTATTCCAGAAACTGTTACTACTATGCAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40769999 34 + 122973662 TCTTTTCATTCCAGAAACCATTACTACTATGCAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869294 34 - 112192347 ttttTTCATTCCAGAAACCATTACTACTATGCAA i rheMac3.chr15 I 1 C 0 s macFas5.chr15 3950923 34 - 112612857 ttttTTCATTCCAGAAACCATTACTACTATGCAA i macFas5.chr15 I 1 C 0 s papAnu2.chr15 3748850 34 - 107442819 ttttttcattccagaAACCATTACTACTATGCAA i papAnu2.chr15 I 1 C 0 s chlSab2.chr12 108551523 34 + 108555830 ttttttCATTCCAGAAACCATTACTACTATGCAA i chlSab2.chr12 I 2 C 0 e tarSyr2.KE939781v1 776153 2433 + 842509 I a score=4178.000000 s hg38.chrUn_GL000218v1 54411 3 + 161147 CAA s panTro4.chr2A 18582938 3 - 113622374 CAA i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11822755 3 + 72422247 CAA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770033 3 + 122973662 CAA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869328 3 - 112192347 AAA i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3950957 3 - 112612857 AAA i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748884 3 - 107442819 AAA i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551557 3 + 108555830 AAA i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 778586 3 + 842509 CAC i tarSyr2.KE939781v1 I 2433 I 44 a score=99324.000000 s hg38.chrUn_GL000218v1 54414 43 + 161147 AGTAAAAATATCTAGTTTAAATAATAATTTGATACGGTCAGGT s panTro4.chr2A 18582941 43 - 113622374 AGTAAAAATATCTAGTTTAAATAAAAATTTGATACGGTCAGGT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11822758 43 + 72422247 AATAAAAATATCTAGTTTAAATAATAATTTGATACGGTCAGGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770036 43 + 122973662 AGTAAAAATATCTAGTTTAAATAATAATTTGATACAGTCAGGT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869331 41 - 112192347 AGTAAAC--ATCTAGTTTAAATAATAATTTGATACGGTCAGGT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3950960 43 - 112612857 AGTAAACATATCTAGTTTAAATAATAATTTGATACGGTCAGGT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748887 43 - 107442819 AGTAAACATATCtagtttaaataataatttgataCGGTCAGGT i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551560 43 + 108555830 AGTAAACATATCTAGTTTAAATAATGATTTGATACGGTCAGGC i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 778589 44 + 842509 I a score=6320.000000 s hg38.chrUn_GL000218v1 54457 3 + 161147 -GGG s panTro4.chr2A 18582984 3 - 113622374 -GGG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11822801 3 + 72422247 -GGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770079 3 + 122973662 -GGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869372 3 - 112192347 -GGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951003 3 - 112612857 -GGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748930 3 - 107442819 -GGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551603 3 + 108555830 -GGG i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 778633 3 + 842509 TGG- i tarSyr2.KE939781v1 I 44 I 7 a score=14546.000000 s hg38.chrUn_GL000218v1 54460 6 + 161147 GATGAG s panTro4.chr2A 18582987 6 - 113622374 GATGAG i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11822804 6 + 72422247 GATGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770082 6 + 122973662 TATGAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869375 6 - 112192347 GATGAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951006 6 - 112612857 GATGAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748933 6 - 107442819 GATGAg i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551606 6 + 108555830 GATGAG i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 778636 7 + 842509 I a score=26652.000000 s hg38.chrUn_GL000218v1 54466 11 + 161147 TGCACACGTGT s panTro4.chr2A 18582993 11 - 113622374 TGCACAAGTGT i panTro4.chr2A C 0 C 0 s ponAbe2.chrUn 11822810 11 + 72422247 TGCACACGTGT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770088 11 + 122973662 TGCACACGTGT i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869381 11 - 112192347 TGCACACGTGT i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951012 11 - 112612857 TGCACACGTGT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748939 11 - 107442819 tgcacacgtgt i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551612 11 + 108555830 TGCACACGTGT i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 778643 10 + 842509 TACACACTGA- i tarSyr2.KE939781v1 I 7 I 279 a score=544162.000000 s hg38.chrUn_GL000218v1 54477 232 + 161147 GTGTACACACACACGCAGGCTCTAAATGGGATATTTTGGCGGAGCAGAGGGATAAGGCTTTTATTTCGTTGGTGTGTTGAGTTAGAATCGCCCTTCTCACAATTAAATAATTTAAATCAGGAGTTGTATTAAAGCTAATTTGTACAACTAGGCAACATCTTTTCTCCATATATTTATACACATATACACATCTCTAATATTTGCATTTATTACTTCATCTAAAAGAGCTTGG s panTro4.chr2A 18583004 224 - 113622374 GTGTACACACACGCGCAGGCTCTGAATGGGATATCTTGGCGGAGCAGAGGGATAAGGCTTTTATTTTGTTGGTGTGTTGAGTTAGAATCGCCCTTCTCACAA----ATAATTTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAACTAGGCAACATCTTTTCCCCATATATTTATACACATATACACATCTCTAATATTTGCATTTATT----CATCTAAAAGAGCTTGG i panTro4.chr2A C 0 N 0 s ponAbe2.chrUn 11822821 232 + 72422247 GTGTACACACACACGCAGGCTCTGAATGGGATATTTTGGCGGAGCAGAGGGATAAGGCTTTTATTTCGTTGGTGTGTTGAGTTAGAATCACCCTTCTCACAATTAAATAATTTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAACTAGGCAATATCTTTTCCCCATATATTTATACACATATACACATCTCTAATACTTGCATTTATTACTTCATCTAAAAGAGCTTGG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770099 232 + 122973662 GTGTACATACACACGCAGGCTCTGAATGGGATATTTTGGCGGAGCAGAGGGATAGGGCTTTTATTTCGCTGGGGTGTTGAGTTAGAATCACCCTTCTCACAATTAAATAATTTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAACTAGGCAACATCTTCTCCCCATATATTTATACACATACACACATCTCTAATATTTGCATTTATTACTTCATCTAAAAGAGCTTGG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869392 231 - 112192347 GTGTACACACA-ACACAGGCTCTGAACGGGATATTTTGGCGGAGCAGAGGGATAAGGCTTTTATTTTGTTGTTGTGTTGAGTTAGAATCTCCCTTCTCACAATTAAATAATGTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAGCCAGGCAACATCTTTTCCCCATATATTTATACATATACACTCATCTCTAATATTTGCACTTATTACTTCACCTAAAAGAGCTTGG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951023 231 - 112612857 GTGTACACACA-ACACAGGCTCTGAACGGGGTATTTTGGCGGAGCAGAGGGATAAGGCTTTTATTTTGTTGTTGTGTTGAGTTAGAATCTCCCTTCTCACAATTAAATAATGTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAGCTAGGCAACATCTTTTCCCCATATATTTATACATATACACTCATCTCTAATATTTGCACTTATGACTTCATCTAAAAGAGCTTGG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3748950 231 - 107442819 gtgtacaCACA-ACACAGGCTCTGAACGGGATATTTTGGCGGAGCGGAGGGATAaggcttttattttgttgttgtgttgaGTTAGAATCTCCCTTCTCacaattaaataatgtaaatcaGGAGTTTTGTTAAAGCTAATTTGTACAGCTAGGCAACATCTTTTCcccatatatttatacatatacactcATCTCTAATATTTGCACTTATTACTTCATCTAAAAGAGCTTGG i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551623 232 + 108555830 GTGTACACACACACACAGGCTCTGAACGGGATATTTTGGCGGAGCAGAGGGATAAGGCTTTTATTTTGTTGTTGTGTTGAGTTAGAATCTCCCTTCTCATAATTAAATAATGTAAATCAGGAGTTTTGTTAAAGCTAATTTGTACAGCTAGGCAACATCTTTTCCCCATATATTTATACATATACACTCATCTCTAATATTTGCACTTATTACTTCGTCTAAAAGAGCTTGG i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 778653 279 + 842509 I a score=104448.000000 s hg38.chrUn_GL000218v1 54709 51 + 161147 AAAAAGGGTCCTAGGTCT-TGGCTA-GTTAAGGTAAAGATCTATATTTTAAGG s panTro4.chr4_GL389838_random 0 48 + 75234 AAAAAGGGTCCTAAGTCT--GGCTA-GT-AAGGTAAA-ATCTATATTTTAAGG i panTro4.chr4_GL389838_random N 0 C 0 s ponAbe2.chrUn 11823053 52 + 72422247 AAAAAGGGTCCTAAGTCTTTGGCTA-GTTAAGGTAAAAATCTATATTTTAAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770331 52 + 122973662 AAAAAGGGTCCTAAGTCTTTGGCTA-GTTAAGGTAAAAATCTATATTTTAAAG i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869623 53 - 112192347 AAAAAGAGTCCTAAGTCCTTGGCTAGGTTAAGGTAAACATCTATATTTTAAAG i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951254 53 - 112612857 AAAAAGAGTCCTAAGTCCTTGGCTAGGTTAAGGTAAACATCTATATTTTAAAG i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3749181 53 - 107442819 AAAAAGAGTCCTAAGTCCTTGGCTAGGTTAAGGTAAAcatctatattttaaag i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551855 53 + 108555830 GAAAAGGGTCCTAAGTCCTTGGCTAGGTTAAGGTAAACATCTATATTTTAAAA i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 778653 279 + 842509 I a score=3276.000000 s hg38.chrUn_GL000218v1 54760 1 + 161147 T s panTro4.chr4_GL389838_random 48 1 + 75234 T i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823105 1 + 72422247 T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770383 1 + 122973662 T i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869676 1 - 112192347 T i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951307 1 - 112612857 T i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3749234 1 - 107442819 t i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551908 1 + 108555830 T i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 778932 1 + 842509 T i tarSyr2.KE939781v1 I 279 I 63 a score=132693.000000 s hg38.chrUn_GL000218v1 54761 62 + 161147 AATAAAAACGTTTGCTATGGACAGAGACATGCAGACACTGTGGGTGAAGCTGATTCATGTTC s panTro4.chr4_GL389838_random 49 52 + 75234 AATAAAA--CTTTGCTAGGGACAGAGACAT-------CTGTGGG-GAAGCTGATTGATGTTC i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823106 62 + 72422247 AATAAAAACATTTGCTATGGACAGAGACATGCAGACACTGTGGGTGAAGCTGATTGATGTTC i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770384 62 + 122973662 AATAAAAACATTTGCTATGGACAGAGGCATGCAGACACTCTGGGTGAAGTTGATTGATGTTC i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869677 62 - 112192347 AATAAAAACACTTGCTATAGACAGAGACATACAGACACTGTGGGTGAAGCTGATTGATGTTC i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951308 62 - 112612857 AATAAAAACACTTGCTATGGACAGAGACATACAGACACTGTGGGTGAAGCTGATTGATGTTC i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3749235 62 - 107442819 aataaaaacactTGCTATGGACAGAGACATACAGACACTGTGGGTGAAGCTGATTGATGTTC i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551909 62 + 108555830 AACAAAAACATTTGCTATAGACAGAGACATACAGACACTGTGGGTGAAGCTGATTGATGTTC i chlSab2.chr12 C 0 C 0 e tarSyr2.KE939781v1 778933 63 + 842509 I a score=2552.000000 s hg38.chrUn_GL000218v1 54823 1 + 161147 C s panTro4.chr4_GL389838_random 101 1 + 75234 C i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823168 1 + 72422247 C i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770446 1 + 122973662 C i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869739 1 - 112192347 C i rheMac3.chr15 C 0 C 0 s macFas5.chr15 3951370 1 - 112612857 C i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3749297 1 - 107442819 C i papAnu2.chr15 C 0 C 0 s chlSab2.chr12 108551971 1 + 108555830 C i chlSab2.chr12 C 0 C 0 s tarSyr2.KE939781v1 778996 1 + 842509 T i tarSyr2.KE939781v1 I 63 I 211 a score=255707.000000 s hg38.chrUn_GL000218v1 54824 105 + 161147 ATTGAAGGAAATGACATGGGGTTTTCTAAGGGAAAGCCCAGCATGCCGCAAGGAGAGGGGAGGTCCCAGGAGGGAATTGGAGTCAGCATTAGGATCTAAGTGTCA s panTro4.chr4_GL389838_random 102 104 + 75234 ATTGAAGGAA-TGATATGGGGTTTTCTAAGGGAAAGCCCAGCATGCTGCAAGGAGAGAGGAGGTCCCGGGAGGGAATTGGAGTCAGCATTAGGATCTAAGTGTCA i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823169 105 + 72422247 ATTGAAGGAAATGACATGGGGTTTTCTAAGGGAAAGCCCAGCATGCTACAAGGAGACGGGAGGTCCCAGGAGGGAATTGGAGTCAGCATTAGGATCTAAGTGTCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770447 105 + 122973662 ATTGAAGGAAATGACATGGGGTTTTCTAAGGGAAAGCCCAGCATGCTACAAGGAGAGGGGAGGTCTCGGGAGGGAACTGGAGTCAGCATTAGGATCTAAGTGTCA i nomLeu3.chr1a C 0 C 0 s rheMac3.chr15 3869740 105 - 112192347 GCTGACGGAAATGACATGGGGTTTTCTGAGGGAAAGCCCAGCATGCTACAAGGAGAGGGGAGGTCCCGGGAGGGAACTGTAGTCAGCATTAGGATCTAAGTGTCa i rheMac3.chr15 C 0 N 0 s macFas5.chr15 3951371 105 - 112612857 GCTGAAGGAAATGACATGGGGTTTTCTGAGGGAAAGCCCAGCATGCTACAAGGAGAGGGGAGGTCCCGGGAGGGAACTGTAGTCAGCATTAGGATCTAAGTGTCa i macFas5.chr15 C 0 M 77914 s papAnu2.chr15 3749298 105 - 107442819 ACTGAAGGAAATGACATGGGGTTTTCTGAGGGAAAGCCCAGCATGCTACAAGGAGAGGGGAGGTCCCGGGAGGGAACTGTAGTCAGCATTAGGATCTAAGTGTCA i papAnu2.chr15 C 0 I 3173 s chlSab2.chr12 108551972 105 + 108555830 GTTGAAGGAAATGACATGGGGTTTTCTGAGGGAAAGTCCAGCATGCTACAAGGAGAGGGGAGGTCCCGGGAGGGAACTGTAGTCAGCATTAGGATCTAAGTGTCa i chlSab2.chr12 C 0 N 0 e tarSyr2.KE939781v1 778997 211 + 842509 I a score=45748.000000 s hg38.chrUn_GL000218v1 54929 134 + 161147 CAGGGGAGTGTGTTCCCAAAAAAGACTGTGACTGTTTCTTTGTCCATCCTGAACTGGTTACCATGAgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgAATTAAAAG s panTro4.chr4_GL389838_random 206 116 + 75234 CAGGGGAGTGTGCTCCCAAAAAAGACTGTGACTGTTTCTGTGTCCATCCTGAACTGGTTACCATGAgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg------------------AATTAAAAG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823274 93 + 72422247 TAGGGGAGTGTGTTCCCAAAAAAGACTATGACTGTTTCTGTGTCCATCCTGAACTGGTTACCATGAGTGTGTGT-----------------------TGTGTGTGTG------------------AATTAAAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770552 111 + 122973662 TAGGGGAGTGTGTTACCAAAAAAGACTATGGCTGTTTCTGTGTCCGTTCTGAACTGGTTACCATGAgtgtgtgt----gtgtgtgtgtgtgtgtgtgtgtgtgtgAG------------------AATTAAAA- i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M e tarSyr2.KE939781v1 778997 211 + 842509 I a score=753.000000 s hg38.chrUn_GL000218v1 55063 2 + 161147 AG s panTro4.chr4_GL389838_random 322 2 + 75234 AG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823367 2 + 72422247 AG i ponAbe2.chrUn C 0 C 0 s tarSyr2.KE939781v1 779208 2 + 842509 AA i tarSyr2.KE939781v1 I 211 I 28 e nomLeu3.chr1a 40770663 0 + 122973662 C e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=15624.000000 s hg38.chrUn_GL000218v1 55065 28 + 161147 GAGTTACATGCTGGGGCATTTCTGGTAT s panTro4.chr4_GL389838_random 324 28 + 75234 GAGTTACATGCTGGGGCATTTCTGGTAT i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823369 28 + 72422247 GAGTTACATGCTGGGGCATTTCTGGTAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770663 28 + 122973662 GAGTTACATGCTGGGGCATTTCCGGTAT i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M e tarSyr2.KE939781v1 779210 28 + 842509 I a score=9024.000000 s hg38.chrUn_GL000218v1 55093 12 + 161147 CTCAACTGGCAT s panTro4.chr4_GL389838_random 352 12 + 75234 CTCAACTGGCAT i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823397 12 + 72422247 CTCAACTGGCAT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770691 12 + 122973662 CTCGACTGGCAT i nomLeu3.chr1a C 0 C 0 s tarSyr2.KE939781v1 779238 12 + 842509 TTTAACTGCCAT i tarSyr2.KE939781v1 I 28 N 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=193782.000000 s hg38.chrUn_GL000218v1 55105 372 + 161147 CTCAGCTGCTGGTGATGATGGCTATACATTTTCCTCAGTATTCAATG-TGCGTATTTTGAGTTAACAGTCCACCCATTggctgaggcaggtggatcatctgaggtgaagagtttgagaccagcctggccaatatgtgaaactctgtctctactaaaaatacaaaaattagccaggcatggttgcagcacctgtaatcccagctactcgggaggccaagacaggagaattgcttgaatccaggagacagaatttgcagtgagctgagatggaccactgcactccagcttgggcagcagagtgagacttggtctcaaaaaaaaaaa-----GTTATTGTGACATGCTGTACACAT-----------TCACAAATTCAGTGTCTCCCAGAAG s panTro4.chr4_GL389838_random 364 385 + 75234 CTCAGCTGCTGGTGATGATGGCTATACATTTTCCTCAGTATTCAATGGTGCGTATTTCGAGTTAACAATCCACCCATTggctgaggcaggtggatcatctgaggtgaagagttcgagaccagcctggccaatatgtgaaactctgtctctactaaacatacaaaaattagccaggcatggttgcagcacctgtaatcccaactactcgggaggccaagacaggagaattgcttgaattcaggagacagaagttgcagtgagctgagaagggccactgcactccagcttgggcagcagagtgagacttggtctcaaaaaaaaaaa----aGTTATTGTGACATGCTGTACACATGCTGTGCACATTCACAAATTCAGTGTCTCCCAGAAG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823409 378 + 72422247 CTCAGCTGCTGGTGATGATAGCTATACATTTTCCTCAGTATTCAATGGTGCGTATTTTGAGTTAACAATCCACCCATTggctgaggcaggtggatcatctgaggtgaggagttcgagaccagcctggccaatatgtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggttgcagcacctgtaatcccagctactggggaggccaagacaggagaattgcttgaatccaggagggagaggttgcagtgagctgagatgggccactgcactccagcttgggcagcagagtgagacttggtctaaaaaaaaaaaaaaaaaGTTATTGTGACATGCTGTACACAT-----------TCACAAATTCAGTGTCTCCCAGAAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40770703 373 + 122973662 CTCAGCTGCTGGTGATGATGGCTATACATTTTCCTCAGTATTCAATGATGCGTATTTTGAGTTAACAATTCACCCATTggctgaggcaggtggatcatctgaggtgaggagttcgagactagcctggccaatatgtgaaaccctgtctctaccaaaaatacaaaaattaaccaggcatggttgcagcacctgtaatcccagctactcgggaggccgagacaggagaattgcttgaatccaggaggcagaggttgcagtgagctgaaacgggccactgcactccagcttgggcagcagagtaagacttggtctcaaaaaaaaaaa----aGTTATTGTGACATGCTGTACACAT-----------TCAC-AATTCAGTGTCTCCCAGAAG i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=59459.000000 s hg38.chrUn_GL000218v1 55477 253 + 161147 CCTGAGAttctttctttctttctttctttctttttt------gagaaggaatttcactcttgttgcccaggctggagtgcaatggtgtgatctcggctaactacaaccc----ttcctgggttcaagtgattcttctgcctcagcctaagtagctcctgcctcccaagtagctgggattacaggcatgtgccaccatgtgcagctaattttttatttttagtagagttggggtttctccacgttgatcaggctggtcttgaac s panTro4.chr4_GL389838_random 749 263 + 75234 TCTGAGAttctttttttctttctttctttcttttttttttttgagacagaatttcactcttgttgcccaggctggagtgcaatggtgtgatctcggctaactacaacccccacttcgtgggttcaagcgattctcctgcctcagcccaagtagctcctgcctcccaagtagcagggattacaggcatgtgccacaatgtgcagctaatttttcatttttagtagagttggggtttctccacgttggtcaggctagtctcgaac i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11823787 251 + 72422247 TCTGAGATTCAttttt------ttttttcttttttt------gagacggaatttcactcttgttgcccaggctggagtgcaatggtgtgatctcggctaactgcaacctccgcttcgtgggttcaagcgattctcctgcatcagcccaagtagctcctgcgtcccaagtagctgggattacaggcatatgccaccacacccagctaattttttatttttagtagagttggggtttctccatgttggtcaggctggtctcgaac i ponAbe2.chrUn C 0 C 0 e nomLeu3.chr1a 40771076 0 + 122973662 C e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=2610.000000 s hg38.chrUn_GL000218v1 55730 7 + 161147 tcctgac s panTro4.chr4_GL389838_random 1012 7 + 75234 tcctgac i panTro4.chr4_GL389838_random C 0 C 0 s panPan1.AJFE01006577 5180 5 - 5650 --ctgaG i panPan1.AJFE01006577 N 0 N 0 s ponAbe2.chrUn 11824038 7 + 72422247 tcctgac i ponAbe2.chrUn C 0 C 0 e nomLeu3.chr1a 40771076 0 + 122973662 C e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=59089.000000 s hg38.chrUn_GL000218v1 55737 230 + 161147 ctcaggtgatccacccgccttggcctctcgaagtgctgggattacagccatgagccaccatgcccagccAgaaagttttaaggctatgattattagacaatcatacacacaaaaagtactgaaaaagtctcaggaatgcagtacctcattggcctggtatgacaaagataaaaagaagttggtcatgaaaatttctgaatgtggtttaggacaaggagccccagtaagat s panTro4.chr4_GL389838_random 1019 230 + 75234 ctcaggtgatccacctgcctcggcctctcgaagtgctgggattacagccatgagccaccatgtccagccAgaaagttttaaggctatgattattagaccatcatacaaacaaaaagtacttaaaaagtctcaggaatgcagtccctcattggcctggtatgactaagataaaaagaagttggtcgtgaaaatttctgaatgtggtttaggacaaggaaccccagtaagat i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11824045 230 + 72422247 ctcgggtgatccacccgcctcagcctctcgaaatgctgggattacaagcatgagccaccatgcccagctAgaaagttttaaggctatgattattagaccatcacacacacacaaagtacttaaaaagtctcaggaatgctgtccctcattggcctggtatgacaaagataaaaagaagtcggtcgtgaaaatttctgaatgtggtttaggacaaggaaccccagtaagat i ponAbe2.chrUn C 0 C 0 e nomLeu3.chr1a 40771076 0 + 122973662 C e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=491338.000000 s hg38.chrUn_GL000218v1 55967 983 + 161147 tcagagacaacctagaaaattgaaagacaattttactacccaaatcacccttctataaaaaataatagaagatgtcaaatatgaaaataaaactgtcctctgggccctcaattttctgtgttat-tgggaaggcagacagctactcagcAGTTATATcccataagaatggataacactaaaacaactgacagcatcaagtattggttagaaagtggaactgattctctcaaacattttcattgtagtttaagatggcacaaccacttaggaaaatgtctccctatttcatacaatgccaaatatatacttattttataacccagagaatccactcttatgtacttaaactcaagaaaagtgaaaatattattacagaaaaatgtgtatatctgatttgtttgtagcaggtttattcatgatagcctcaaattagaaactgcttttgtgtctatcaatagtggagtggattataaacaaaacaagcaaaggcctcaaacctgtggtatagtcataaaattgagtattacaaaataaaattaatgaataatcaataggagcaaaatgat--gt--cacaagcatgtttagtgaatgaacataaaa-ttatataatttatagtttcacttatgtaaatggtgaaaacagacaaaactatccttttgtggaaagaatcaaaacgatggaagcctctgtgttcaaatactgaatggaaatgggcatgaga------------------------------------------------------------------aaacgtgtttctgTCAGATCTTCTATATGCCTGATGTACATTCACTAGATGTATTTTGCATATACTATTTTTGCAAATAAAACTGAGATAGACGCAAAATAACTCAAGAGAAAATAGCTAGAAATAAGTAGAGTTGGGATAGAAGCCTTGGAAGCTCCCCCCTACCTTGCTCACCTGGCACAGGCCGAGGAAGCCCTGGGACAATGCTGTGAGCGATC----TGAGGGCCTTCCAGGGGAGCCCCGCCAGCCCATGCTGGTGCCCGAG s panTro4.chr4_GL389838_random 1249 981 + 75234 tcagagacaacctagaaaattgaaagacaattttcctacccaaatcacccttctataaaaaataatagaagatgtcaaatatgaaaataaaactgtcctctgggccctcaattttctatgttat-tgggaaggcaggcagctactcagcAGTTATATcccataagaatggataacactaaaacaactgacagcatcaagtgttggttagaaagtggaactgattctctcaaacattttcattgtagtttaagatggcacaaccgcttaggaaaatgtctccccatttcatacaatgccaaatatatacttattttataacccagaaaatccactcttacgtacttaaactcaagaaaagtgaaaatattattacagaaaaacgtgtatatctgatttgttcgtagcaggtttattcatgatagcctcaaatcagaaactgcttttgtgtctatcgatagtggaatggattataaacaaaacaagcaaaggcctcaaacctgtggtatagtcataatattgagtattacaaaataaaattaatgaataatcaataggagcaaaatgat--gtgtcacaagcatgtttagtgaatgaacataaaaattatataatttatagtttcacttacgtaaatggtgaaaacagacaaaactatccttttgtggaaagaatcaaaaccatggaagcctctgtgttcaaatactgactggaaaagggcatgaga------------------------------------------------------------------aaacgtgtttctgCCAGATCTTCTATATGCCTGATGTACATTCACTCAATGTATTTTGCATATACTATTTTTGCAAATAAAACTGAGA----CGCAAAATAACTCAAGAGAAAATAGCTAGAAATAGGTAGAGTTGGGATAGAAGCCTTGGAAGCTCCCCCCTACCTTGCTCACCTGGCACAGGCCAAGGAAGCCCTGGGACAATGCTGTCAGTGATC----TGAAGGCCTTCCAGGGGAGCCC-GCCAGCCCATGCCGGTGCCCGAG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11824275 1056 + 72422247 tcagagacaacctagaaaactgaaagaaaattttactacccaaatcacccttctataaaaagtaatagaagatgtcaaatatgaaaataaaactgtcctctgggccttcaattttctgtgttatgggggaaggcagacagctactcagcAGTTATATcccataagaatggataacactaaaacaactgacagcatcaagtattggttagaaagtggaactgattctcccaaaca-tttcattgtagtttaagatggcacaatcacttaggaaaatgtctccccatttcatacaatgccaaatatatacttattttataacccagaaaatccactcttatgtacttaaattcaagaaaagtgaaaatattattacagaaaaacgtgtatatctgatttgtttgtagcaggtttattcatgatagcctcaaatcagaaactgcctttgtgtctatcagtagtggaatggattaaaaacaaaacaagcaaaggcctcaaacctgtggtagagtcataaaattgagtattacaaaataaaattaatgaataatcaacaggagcaaaatgat--gtgtcacaagcatgtttagtgaatgaacataaaaattatataatttatagtttcacttacataaatggtgaaaacagacaaaactaaccttttgtggaaagaatcaaaaccatggaagcctctgtgttcaaatactgactggaaatggggatgagaaaacatgtttctgCCAGATCATCTATATGCCTGATGTGCATTCACTCGATGTATTTTGCATATACTAAACATGTTTCTGCCAGATCATCTATATGCCTGATGTGCATTCACTCGATGTATTTTGCATATACTATTTTTACAAATAAAACTGAGATAAAGGCAAAATAACTCAAGAGAAAATAGCTAGAAATAGGTAGAGTTGGGATAGAAGCCTTGGAAACTCCCCCTAACCTTGCCCGCCTGGCACAGGCCGAGGAAGGCCTGGGACAATGCTGTGAGCGACCTGAGTGAGGGCCGTCCAGGGGAGCCCCGCCAGCCCATGCTGGCGCCCGAG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40771076 980 + 122973662 TCAGAGACAACCTAGAAAATTCAAAGAAAACTTTACTACCCAAATCACCCGTCTATAAAAAATAATAGAAGATGTCAAATGTAaaaataaaactgtcctctgggccctcaattttctgtgttatgggggaaggcagacagctactcagcAGTTATATcccataagaatggataacactaaaacaactgacagcatcaagtattggttagaaagtggaactgattctctcaaacattttcattgtagtttaagatggcacaaccacttaggaaaatgtctccccatttcatacaatgccaaatatatacttattttataacccagaaaacccactcttatgtacttaaactcaagacaagtgaaaatattattacagaaaaacgtgtatatctgatttgttcgtagcaggtttattcatgatagcctcaaatcagaaacagcttttgtgtctatcaatagtggaatggattaaaaacaaaacaaacaaaggcctcaaacctgtggtgtagtcataaaattgagaattacaaaataaaattaacaaataat----aggagcaaaatgataagtgtcacaagcatgtttagtgaacgaacaaaaaa-ctatataatttataatttcacttacataaatggtgaaaacagacaaaactaaccttttgtggaaag----aaaaccatggaagcctctgtgttcaaatactgactggaaatgggcatgaga------------------------------------------------------------------aaacatgtttctgCCAGATCTTCTATATGCCTCATGTGCATTCACTCGATGTATTTTGCATATACTACttttacaaataaaactgagataaaggcaaaataactcaagagaaaatagctagaaataggtagagttgggatagaagccttggaagctccccccaatcttgcccacccggcacagGCCGAGGAAGGCCTGGGACAATGCTGTGAGCGACC----TGAGGGTCATCCAGGGGAGCCCCGCCAGCCCATGCTGGCGCCCGAG i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=8238.000000 s hg38.chrUn_GL000218v1 56950 7 + 161147 CTGCCCG s panTro4.chr4_GL389838_random 2230 7 + 75234 CTGCCCG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11825331 7 + 72422247 CTGCCCG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40772056 7 + 122973662 CTGCCAG i nomLeu3.chr1a C 0 C 0 s nasLar1.chrUn_JMHX01103687v1 427 7 - 950 CTGCCCA i nasLar1.chrUn_JMHX01103687v1 N 0 I 225 s rhiRox1.KN298849v1 50504 7 - 81115 CTGCCCA i rhiRox1.KN298849v1 N 0 N 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=273812.000000 s hg38.chrUn_GL000218v1 56957 540 + 161147 CCGCCATCCATCTGAATATGTTGCAAAGACAGTGCTGGCCTGGCAACCGGTGACACTCCATGCCCCACCCCGACCCCCACTTCTACCCAAGTAGCGGCAACCCCAGAGACAGATGCCTGGGCGGCAGCGGCTAAGTCTGGTAGTTGGCCAGGCGGCCAAAGGACGGGAACTGGCCGTTCACCCCATCCCAGTTTCCACGGAGAACTCAGCCATCATGGCCCCTGAGCGGACCCTCAGGCCTGG---GCTGTGCTCTGTGCCTGCAAACCTGACGCCATCCAGGGGAGCTCCGCCTTCCCACGCCAGCGCCTCAGCTGCTGCAGAAAACTGCAAAACTGCAAGTTGCACACAGGCAGAGATGACGGAGCAACCCCTGACCCTCCGTGCCACTCACCCTACCCGCACACACACCTGCCACGTGGACCCTGAGGCCAGTGCCTGGGCGCCCAAGTCAGGCAGTCCGCACAGCAGTGGCACCAGGGTGAAAACCTGCTGCTCAATACCATCCCGGTTACCACAAAGAGCCAG--CCCTGGTGGCCCCTG s panTro4.chr4_GL389838_random 2237 539 + 75234 CCGCCATC----TGAATATGTTGCAAAGACAGTGCTGGCCTGGCAACCGGTGACGCTCCATGCCCCACCCCGACCCCCACTTCTACCCAACTAGCGGCAACCCTAGAGACAGAGGTCTGGGCAGCAGCGGCTAAGTCTGGCAGTTGGCCAGGCGGCCAAAGGACGGGAACTGGCCGTTCACCCCATCCCGGTTTCCATGGAGCACTCAACCACCATGGCCCCTGAGCGGACCCTCAGGCCTGGTGGGCTGTGCTCTGTGCCTGCAAACCTGACGCCATCCAGGGGAGCTCCACCTTCCCGTGCCAGCGCCTCAGCTGCTGCAGAAAACTGCAAAACTGCAAGTTGCACACAGGCAGAGATGACGGAGCAACCCCTGACCCTCCGTGCCACTCACCCTACCCGCACGCAGACCTGCCACGCGGACCCTGAGGCCGGTGCCTGGGCGCCCAAGTCAGGCAGTCCGCACAGCAGTGGCACCAGGGTGAAAACCTGCTGCTCAATACCATCCCAGTTACCACGAGGAGCCAG--CCCCGGCAGCCCCTG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11825338 533 + 72422247 TCGCCATC----TGAATATGTTGCAAAGACAGTGCTGGCCTGGCAACCGGTGACACTCCACGCCCCACCCCGACTCCCACTTCTACCCAAGTAGCGGCAGCCCTAGAGACAGATGCCTGGGCGGCAGCGGTTAAGTCTGGCAGTTGGCCAGGCGGCCAAAGGACGGGAACTGGCAGTTCACCCCATCCCAGTTTCCACGGAGAACTCAACCACCATGGCCCCTGAGCGGACCCTCAGGCCTGGTGGACTGTGCTCTGTGCCCGCAAACCTGACGCCATACAGGGGAGCTCCGCCTTCCCGCGCCAGCGCCTCAGCTGCTGCAGAAAACTGCAAAACTGCAAGTTGCACACGGGCAGAGATGAAGGAGCAACCTCTGACCCTCCGCGCCACTCACCCTACCCGCAC----AGCTGCCACGCGGACCCTGGGGCCGGTGCCTGGGCGCCCAA--CAGGCAGTCCGCACAGCAGCGGCACCAGGGTGAAAACCTGCTGCTCAATACCATCCCGGTTACCACGAAGAGCCAG--CCCCGGCGGCCCCTG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40772063 532 + 122973662 CCGCCATC----TGAATATGTTGCAAAGACAGTGCTGGCCTGGCAACCGGTGACGCTCCACGCCCCACCCCGACCCCCACTTCTACCCAAGTAGCGGCAACCCTAGAGACAGATGCCTGGGCGGCAGCGGCTAAGTCTAGCAGTTGGCCAGGCGGCCAAAGGTCGGGAACTGGCCGTTCACCCCATCCCAGTTTCCACGGAGAACTCAACCACCATGGCCCCTGAGAGGACCCTCAGGCCTGGTGGGCTGTGCTCTGTGCCCGCAAACCTGACGCCATCCAGGGGAGCTCCGCCTTCCCGCGCCAGCGTCTCAGCTGCTGCAGAAAACTGCAAAACTGCAAGTTGCACACGGGCAGAGATGACGGAGCAACCCCTGACCCTCCGCGCCACTCACCCTACCCGCAC----ACCTGCCACGCGGACCCTG-GGCCAGTGCCTGGGCGGACAA----GGCAGTCCCCACAGCAGCGGCACCAGGGTGAAAACCTGCTGCTCAATACCATACCAATTACCACGAAGAGCCCGCCCCCCCGCGGCCCCTG i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M e nasLar1.chrUn_JMHX01103687v1 434 225 - 950 I a score=427.000000 s hg38.chrUn_GL000218v1 57497 2 + 161147 AG s panTro4.chr4_GL389838_random 2776 2 + 75234 AG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11825871 2 + 72422247 CG i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40772595 2 + 122973662 CG i nomLeu3.chr1a C 0 C 0 s nasLar1.chrUn_JMHX01103687v1 659 2 - 950 TG i nasLar1.chrUn_JMHX01103687v1 I 225 N 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=799809.000000 s hg38.chrUn_GL000218v1 57499 1641 + 161147 TTCTTGGAGGAGGCCAAGTCACAGCAACCCCTCAAGTGGGCGGGCGATGCACTTGACCCTGAGGACATCAGGTACCAGGCCCGCCAGCTGACGCCGACATCGGAGCCGCAGCTGCAGTCTAGACGTGGTGCACCGGCAGTAAGTGACTGGACACCCCAGACCAGGCCCGCCCCCCAGTAGCGTGGATCCTGAGGCCAGA-CCCCCAGGCGGCAAAATCAGGCGACGGGCCCCGCCAGCAGCCGCTCAGTTTCATCCATGTGGATACAGAGTGCCCAGCGCCCGGGCCCAGGATCCAGAGAGATGCCCAAGAAGAGCGGAACTTGAGGCCAGGTGGGCTGTGCGCTCTGCGACCCTGAGGCCATCCAAGGGAAGCTCCGCCGTCCCACGCCAGTGCCAGATCTGCAGCTGCAAACTGTGCGTGGGGCACTGGCAGCAGTGAGGGCTGGTGGGTGAAAGAGCAGCCCCTGACTCTGCCTCCATGCCTCTACAGCTACCTGACACTAGCCACACAGACTCCAGGGCCAGAGCCTCAGCGTGAAGCCAGGCCATCTGCGAAGCCACCCAGGTGGCAGCGGAGTGCCCTTGCCAGCACCCTATCTCCCTTCCGAGGAGGAGCGGGGCGGGCTGCAAGGCCAGACAGGCCCTCCTTCTCAGGCCAGGCTGGCGG-------------CGCTCCTGCGATCCTGGGGCCGCCCGGGCGATCCCAAGAGGACCTGCGAGCTCATCGGCGCCAGCCCAGAGCTGCAGCCCCACCTGCCGGCGCGCGCCACCAGGGAAGGGCTTCCGGGAGCCAGGCAGCAACTGCGGTGCAGGCGCGCGCCCAACGGCTTTGCGAGGCTCACTCGGTCTGAGAGGTCGGAGGCTGCGAGTGTCGCTGCTGAAGGCTGTGGTGGACAGGGCTGGATCGCGGACTGTGGAGTAGATCACAgatttgggatcgcgcattgggggttga-tcgcggattgagggttggatcagggacttggggttggataggggatttgggGCTGGGTCGGCCGGGGTCGGCAGAGGAGGTGGGTGAAAAGGTGACAGGGAGGTCGGCCGGGGTCGGGGGAGGGGGGTGGTGAAAAGGTGACAGGGAGCTGCCCCCGCTCAAGAGCCGGAGGTTGGGGTTTCTG---AGAAGTCACCACTATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCACGGCTCCATAGAACATGTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAGGGCGACGCCGTGGGGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGACCTGGATGCCCTGGACAAGCAGCACAGGTAGCGGGGACTCAGCCCGGGGTGGGAGGGGGTCCCCAGGCCCGGCTTCCCCACTGCCCCTGGGACGGGGCCTTTCAGGGCT-CTGGGCACCCTCAGAGCAGCGGAGCCAAACGGACTCTCAGCTGTTTTCCATCCCTCATAATTCCATGGCTGGAGCAGTTGGAGAATTTGAGTGATTTAACTCACAAAGTTAAGCAAACACAGTGTTGTTATTTTTAAAGTACACGTTGAAAACATGGTTTATATACATTATAGGAGGTGCCTAATGAGAGAACTCTTTCCCCTATCA s panTro4.chr4_GL389838_random 2778 1639 + 75234 TTCTTGGAGGAGGCCAAGTCACACCAACCCCTCAAGTGGGCAGGTGATGCACTTGACCCTGAGGACATCAGGTACCAGGCCCGCCAGCTCACGCCGGCATCGGAGCTGCAGCTGCAGTCTAGACGTGGTGCACCGGCAGTAAGTGACTGGACACCCCAGACCAGGCCCGCCCCCCAGTAGCGTGGATCCTGAGGCCAGA-CCCCCAGGCGGCAAAATCAGGCGACGGGCTCCGCCAGCAGCCGCTCAGTTTCATCCGTGTGGATACAGAGTGACCAGCGCCAGGGCCCAGGATCCAGAGAGATGCCCAAGAGGAGCGGAACTTGAGGCCAGGTGGGCTGTGTGCTCTGCGACCCTGAGGCCATCCAAGGGAAGTTCCGGCATCCCACGCCAGTGCCAGATGTGCAGCTGCAAACCGTGCGTGGGGCACTAGCAGCAGTGAGGGCTGGTGGGGGAAGGAGCAGCCCCTGACTCTCCCTCCATGCCTCTCCAGCTACCTGACCCTAGCCACACAGACTCCAGGGCCAGAGCCTCAGCCTGAAGCCGGGCCATCTGCGAAGCCACCCAGGTGGCCGCGGAGTCCACTTGCCAGCACCTTATCTCCCTTCCGAGGAGGAGCGGGGCGGGCTGCAAGGCCAGACAGGCTCTCCTTCTCAGGCTGGGCTGGCGG-------------TGCTCCTGCGATCCTGGGGCCGCCCGGGCGATCCCAAGAGGACCTGCGAGCCCATCGGCGCCCGCCCAGAGCTGCAGCCCCACCTGCCGGCGCGCACCGCCAGGGAGCGGCTTCCGGGAGCCGGGCAGCAACCGCAGTGCAGGCGCGCGCCCAACGGCTTTGCGAGGCTCACTCGGCCTGAGAGGTCGGAGGCTGCGAGTGTCGCTGCTGAAGGCTGTGGTGGACCCGGCTGGATCACGGACTGTGGAGTAGATCACAGATTTGGGATCGCGGATTGGGGGTTGAATCGCGGATTTGGGGCTGGATCAGGGATTTGGGGTTGGATAGGGGATTTGGGGCTGGGTCGGC-GGGGTCGGGGGAGGGGGTTGGTGAAAAGGTGACAGGGAGGTCGGCCGGGGTCGGGGGAGGGGGGTGGTGAAAAG-TGACGGGGAGCTGCCCCCGCTCAAGAGCCAGAGGTTGGGGTC-CTG---AGAAGTCACCACTATAAAGTTATTCGGCTTCGGGAGCCACAGGGGCCAGACAGCCCAGGGCTCCATAGAACATGTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAGGGCGACGCCGCGGGGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGACCTGGACGCCCTGGACAAGCAGCACAGGTAGCGGGGGCTCAGCCTGGGGTGGGAGGGGGTCCCCAGGCCCGGCTTCCCCGCAGCCCCTGGGACGGGGCCTTTCAGGGCT-CCGGGCACCCTCAGAGTGGCGGAGCCAAACGGACCCTCAGCTGTTTTCCATCCCTCATAATTCCCTGGCTGGAGCAGTTGGAGAATTTGAGTGATTTAATTCACAAAGTTAAGCATACACAGTGTTGTTATTTTTAACATAAACGTTTAAAACATGGTTTATGTACATTATAGGAGGTGCCTAATGAGAGAACTCATTCTCCTATCA i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11825873 1580 + 72422247 TTCTTGGAGGAGGCCAAGTCAGAGCAACCCCTCAAGTGGGCGGGCGATGCGCTTGAACCTGAGGACATCAGGTACCAGGCCCGCCAGCTCACGCCGGCATCGGAGCCGCAGCTGCAGTCTAGACGTGGTGCACCGGCAGCAAGTGACTGGACACTCCAGACCAGGCCCGCCCCCCAGTAGCGTGGATCCTGAGGCCAGACCCCCCAGGCGGCAAGATCAGGCAACGGGCCCCGCCAGCAGCCGCTCAGTTTCATCCGTGTGGATACAGAGTGCCCAGCGCCAGGGCCCAGGATCCAGAGAGATGTCCAAGAGGAGCGGACCTTGAGGCCAGGTGGGCTGTACGCTCTGCGGCCCTGAGGCCATCCAAGGGAAGCTCCGCCATCCCGCGCCAGTGCCAGATCTGCAGCTGCAAACCGCGCGTGGGGCACTGTCAGCAGTGAGGGCGGGTGGGGGAAGGAGCAGCCTCTGCCTCTGCCTCCATGCCTCTCCAGCTACCTGACACTAGCCACACAGACTCCAGGGCCAGAGCCTCAGCGTGAAGCCAGGCAGTCCGCGAAGCCACTCAGGTGGCCGCGGAGTGCCCTTGCCAGCGCCCTATCTCCCTTCAGAGGAGGAGCGGGGCGAGCTGCAAGGCCAGACAGGCCCTCCTTCTCAGGCCGGGCTGGCTG-------------CGCGCCTGCGATCCTGGGGCCGCCCGG------------------GCGAGCCCATCGGCGCCCGCCCAGAGCTGCAGCCCCACCTGCCGGCGCGCGCCGCCCGGGAGCGGCTTCCGGGAGCCGGGCAGCAACCGCGGTGCAGGCGCGCGCCCAACGGCTTTGCGGGGCTCACTCGGTCTGAGAGGTCGGAGGCTGCCAGTGTTGCTGCTGAAGGCTGTGGTGGACCGGGCTGGATCGCGGATTGTGGAGTAAATCACAGATttggaatcgcggattgggggttggatcgcggattgggggttggatcggggatttggggtgggataggggatttggggctgggtcggc----------------------------------------------cggggtcgggggaggggGGTGGTGAAAAGGTGACAGGGAGCTGCCCCTGCTCAAGAGCCGGTGGTTGGGGGT-CTGAGAAGAAGTCACCACTATGAAGTTATTCGGCTTCGGGAGCCGCAGGGGCCAGACGGCGCAGGGCTCCATAGACCATGTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAAGGCGGCTGTCAAGGGCGACGCCGCGGAGGTGGAGCGCTGCCTGGCGCGCAGGAGCGGAGA-CTGGACGCCCCGGACAAGCAGCACAGGTAGCGGGGGCTCAGCCCGGGGTGGGAGGGGGTCCCCAGGCCCGGCTTCCCCACAGCCCCTGGGACGGAGCCTTGCAGGGCT-CCGGGCACCCTCGGAGCGGCGGAGCCAAACGGACTCTCAGCTGTTTTCCATCCCTCATAGTTCCCTGGCTGGAGCAGTTGGAGAATTTGAGTGATTTAACTCACAAAGTTAAGCATATACAGTGTTGTTATTTTTAACGTACACGTTTAAAACATGGTTTATATACATTATAGGAGGTGCCTAATGAGAGAACTCATTCCCCTATCA i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40772597 1607 + 122973662 TTCTTGGAGGAGGCCAAGTCAGAGCAGCCCCTCAAGTGGGCGGGCGATGCACTTGACCCTGAGGACATCAGGTACCAGGCCCGCCAGCTTGCGCCAGCATCGGAGCCACAGCTGCAGTCTAGACGTGGTGCACCGGCAGCAAGTGACTGGACACCCCAGACCAGGCCCGCCCCCCAGTAGCGTGGATCCTGAGACCAGA-CCCCCAGGCGTCAAAATCAGGCGACCGGCCCCGCCAGCAGCCGCTCAGTATCATCCGTGTGGATACAGAGTGCCCAGCGCCAGGGCCCAGGATCCGCAGAGATGTCCAAGAGGAGCGGACCTTGAGGCCAGGTGGGCTGTGCACTCTGCGACCCTGAGGCCATCCAAGGGAAGCTCCACCATCCCGCGCCAGTGCCAGATCTGCAGCTGCAAACCGCGCGTGGGGCACTGGCAGCAGTGAGGGCGGGTGGGGGAAGGAGCAGCCCCTGACTCTGCCTCCATGCCTCTCCAGCTACCTGACACTAGCCACACAGACACCAGGGCCAGAGCCTCAGCGTAAAGCCAGCCCATCCGCAAAGCCACTCCGGTGGCCGCAGAGTGCCCTTGCCAGCACCCTATCTCCCTTCTGAGCAGGAGCGGGGTGGGCTGCAAGGCCAGACAGGCCGTGCTTTTCAGGCCGGGCTGGATGGCGCCTGCGATCCCGCGCCAGCGACCCTGGGGCCTCCCGGGCGATCCCAGGAGAACCCGCAAGCCCAGCCGCGCCTGCCCAGAGCTGCAGCCCCACCTGCCGGCGCGCGCCGCCAGGGCGCGGCTTC--GGGGCGGGGCGGCAATCACGGTGCAGGCGCGCGCCCAACAGCTTTGCGAGGCTCACTCGGTCTGAGAGGTCGGAGGCTGCGAGTGTCGCTGCTGAAGGCTGTGGTAGACCGGGCtggatcgcggattgtggagtagatcatagatttgggatcacagattgggggttggttcgtggatttggggtaggatggagga-ttggggttgGATAGgggg-tcggggctgggtcgtc----------------------------------------------tggggtcgggggaggggGGTGGTGAAAAGGTGACAGGGAGCTGCCCCCGCTCAAGAGCCGGTGGTTGGGGGT-CTGAGAAGAAGTCACCACTATGAAGTTA-TCGGCTTCGGGAGCCGCAGGGGCCAGACGGCCCAGGGCTCCATAGACCACGTCTACACGGGTTCCGGATACCGAATCCGGGACTCCGAACTGCAGAAGATCCACAGGGCGGCTGTCAAGGGTGACGCCGCGGAGGTGGAGCGCTGCCTGGTACGCAGGAGCGGAGACCTGGACGCCCTGGACAAGCAGCACAGGTAGCGGGGGCTCAGCCCGGGGTGGGAGGGGGTCCCCAGGCCCGGCTTCCCTGCAGCCCCTGAGACTGGGCCTTGCAGGGCTGCGGGGCACCCTCGGAGCGGCGGAGCCAAACGGACTCTCAGCTGTTTTCCATCCCTCATAATTCCCTGGCTGGAGCAGTTGGAGAGCTTGAGTGATTTAACTCACAAAGTTAAGCATATACAGTGTTGTTATTTTTAACGTACACGTTTAAAACATGGTTTATATACATTATAGGAGGTGCCTAATGAGAGAACTCATTCCCCTATCA i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=18188.000000 s hg38.chrUn_GL000218v1 59140 41 + 161147 AAAATACCGTGAGTTA-TTTCAGTAGGCAAAAAGTTCTCAGA--- s panTro4.chr4_GL389838_random 4417 41 + 75234 AAAATACCGTGAGTTA-TTTCAGTAGGTGAAAAGTTCTCAGA--- i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11827453 41 + 72422247 AAAATAACGTGAGTTA-TTTCAGCAGGCGAAAAGTTCTCAGA--- i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40774204 42 + 122973662 AAAATACCGGGAGTTATTTTCAGTAGGCGAAAAGTTCTCAGA--- i nomLeu3.chr1a C 0 I 687 s tarSyr2.KE941293v1 7938 35 - 339215 AAAATTCCCTG---TA-TATCAG------AAAAATTAAAAAAATA i tarSyr2.KE941293v1 N 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=-1294.000000 s hg38.chrUn_GL000218v1 59181 1 + 161147 -T s panTro4.chr4_GL389838_random 4458 1 + 75234 -T i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11827494 1 + 72422247 -T i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40774933 1 + 122973662 -T i nomLeu3.chr1a I 687 C 0 s tarSyr2.KE941293v1 7973 1 - 339215 A- i tarSyr2.KE941293v1 C 0 N 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=217151.000000 s hg38.chrUn_GL000218v1 59182 474 + 161147 AAGAGAGCTTACTTGAAAAATATTTACTATATTATATATATATATATGTATTTTCAGATG--AAAAGTATGTTTTCATTTTATAGGGAATTCATTATAttctttttttttttt-----gagttggagtctcgcttctttgcccaggctggtgtccaatggcacaatcttggctcactgcaacctctgcctgctgggttcaagcaattctcctacctcagccttccaagtagcttggattataggcaggtgccagcgtgcctggctaatttttgtatatttagtagac--ggggtttcaccacgttggccagactggtctcgaactcctgacctcaagtgatctgcccgcctccgcctcccaaagtgctgggattaaaggtgtgagccaccgtgcccagccTATGTTGTTTATTATATATCATAAGTtatatatatatatatatatatatatatatatatatatatatatTACTGATACGTATA s panTro4.chr4_GL389838_random 4459 455 + 75234 AAGAGAGCTTACTTGAAAAATATTTACTATACTATATATATATTT------TTTCAGATG--AAAAGTATGTTTTTATTTTATAGGGAATTCATTATAttctttttttttttttttttgagtcggagtctcgcttctttgcccaggctggtgtccaatggcaaaatcttggctcactgcaacctctgcctgctgggttcaagcaattctcctacctcagcctcccaagtagctgggattacaggcaggtgccagtgtgcctggctaacttttgtatatttagtagagagggggtttcaccacgttggccactctcgtctcgaactcctgacctcaagtgatctgcccgcctccgcctcccaaagtgctgggattacaggtgtgagccaccgcgcccagccTATGTTGTTTATTATATATCATAAG--------------------atatatatatatatatatatatattactgatacgtata i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11827495 443 + 72422247 AAGAGAGCTTACTTGaaaaatatttactatattatatatatatatattt--tttCAGATGAAAAAAGTATGTTTTCATTTTATAGGGAATTCATTGTAttcttttttttt--------gagtcggagtctcgcttctttgcccaggctggtgtccaatggcacaatcttggctcactataacctctgcctgctgggttcaagcaattctcctacctcagcctcccaagtagctgggattacaggcaggtgccagcatgcctggctaatttttgtatatttagtagagagggggtttcaccacgttggccaggctggtctcgaactcctgacctcaagtgatctgcccacctccgcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggccTATGTTGTTTATtatatatcataag------------------------------atatatatatatattactgatatgtata i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40774934 449 + 122973662 AAAAGAGCTTACTTGAAAAatatttactatattacatatatatt-------tttcagatg--aaaagtatgttttcattttatagggaattcattatattgttttttttgttttt---gagttggagtctcacttctttgcccaggctggtgtccaatggcacaatcttggctcactgcaacgtctgcctgctgggttcaagcaattctcctacctcagcctcccaagtagctgggattacaggcaggtgccagcatgcctggataatttttgtatttttagtagagagggggtttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatctgcccgcctccgcctcccaaagtgctgggattacaggtgtgagccaccgcgcccagcctata----ttattatatatcataag------------------atatatatatatgtatacatatatattactgatatgtata i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=22219.000000 s hg38.chrUn_GL000218v1 59656 50 + 161147 CATATATACCAGATATAAT------------ATGTC------ATATATATCAGTTATATATAC---ACATT s panTro4.chr4_GL389838_random 4914 50 + 75234 catatataccagatataat------------atgtc------atatatatcagatatatatac---acatT i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11827938 37 + 72422247 catatataacagatataat------------atgt-------------------tatatatac---acatT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40775383 50 + 122973662 catatataacagatataat------------atgtt------atatatatcagttatatataC---ACATT i nomLeu3.chr1a C 0 C 0 s tarSyr2.ABRT02011634v1 260 71 + 7507 CATATATATCAGAAAAAAGTAGCAGAAGACAATGTTAGCAAAATATTTACAAAATATATATACTAAATATT i tarSyr2.ABRT02011634v1 N 0 N 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=269543.000000 s hg38.chrUn_GL000218v1 59706 525 + 161147 AGATGAAAAGTACATTTTCATTTGACAGGGAATTCTTTCAAATCAAATCATCAAACACTCTAAAATTGGGCAAAGTACACTTCTCCAGATCTGCAAGTTACTTGTGTACATAGGAAAAAGTCCTTCGCATTTCTGGCATAAGAATTTAAATTAAAAGAGGAATGAAACAGTTTTCTATCCACAATATTTGTGAGGATGTTTTATACTCCTGCTTAAAGTTTAAGTTGCTGATTACTTTTCAAATAGATAATTTGGTGGTAAGTACTACAATTAAAAAATATGTATGCCCTTTACCCATCAATTCCATTATACTAAAACACCCTTAGGAAATAAAGATACATGCACTTTATTTTTCACCTCACTTATTTTAAAAAGAACCCAAAGAGTGGATCCTATAAATAAACTTCAGTTGCATCCACAGGATGGAATAATATGTGACCATTGAAGGTGGCAATAGATACAGAAGTATATTGATGTGCGAAGATGTATTTTGTTATAGCTAGTGAG--AAAAAAATCAATTAAGTT s panTro4.chr4_GL389838_random 4964 525 + 75234 AGATGAAAAGTACATTTTCATTTGACAGGGAATTCTTTCAAATCAAATCATCAAACACTATAAAATTGGGCAAAGTACTTTTTTCCAGATCTGCAAGTTACTTGTGTACATAGGAAAAAGTCCTTCGCATTTCTGGTATAAGAATTTAAATTAAAAGAGGAATGAAACAGTTTTCTATCCACAATATTTGTGAGGATGTTTTATACTCCTGCTTAAAGTTTAAGTTGCTGATTACTTTTCAAATAGATAATTTGGTGGTAAGTACTACATTTAAAAAATATGTATGCCCTTTACCCATCAATTCCATTATACTAAAACATCCTTAGGAAATAAAGATACATGCACTTTATTTTTCACAGCACTTATTTTAAAAAGAACCCAAAGAATGGATCCTATGAATAAATTTCAGTTGCATCCACAGGATGGAATAATATGTGACCACTGAAGGTGGCAATAGATACAGAAGTATATTGATGTGCGAAGATGTATTTTGTTATAGCTAGTGAG--AAAAAAATCAATTAAGTT i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11827975 527 + 72422247 AGATGAAAAGTACATCTTCATTTTACAGGGAATTCTTTCAAATCAAATCATCAAACACTCTAAAAGTGGGCAAAGTACCTTTTTCCAGATCTACAAGTTACTTATATACATAGGAAAAAATCCTTCGCATTTCTGGTATAAGAATTTAAATTAAAAGAGGAATGAAACAGTTTTCTATCCACAATATTTGTGAGGATGTTTtatactgctgcttaaagtttaagttgctgattacttttcaaatagaaaattttgtggtaagtactacatttaaaaaatgtgtatgccctttacccaccaattccattatactaaaatacccttaggaaataaagatatgtgcacTTTATTTTTCACAGCACTTACTTTAAAAAGAACCCATAGAATGGATCCTATAAATAAATTTCAGTTGCATCCATAGGATGGAATAATATGTGACCACTGAAGGTGGCAATAGATACAGAAGTACGTTGATGTGCAAAGATGTATTTTGTTATAGCTAGCGAGGAAAAAAAATTAGTTAAATT i ponAbe2.chrUn C 0 C 0 s nomLeu3.chr1a 40775433 527 + 122973662 AGATGAAAAGTACATCTTCATTTTACAGGGAATTCTTTCAAATCAAACCATCAAACACTCTAAAAGTGGGCAAAGTACCTTTTTCCAGATCTACAAGTTACTTATATACATAGGAAAAAATCCTTCGCATTTATGGTATACGAATTTAAATTAACAGAGGAATGAAACAGTTTTCTATCCACAATATTTGTGAGGATGTTTtatactgctgcttaaagtttaagttgctgattacttttcaaatagataatttggtggtaagtactacatttaaaaaatgtgtatgccctttacccatcaattccattatactaaaacacccttaggaaataaagatacatgcacTTTATTTTTCACAGCACGTATTTTAAAAAGAACCCATAGAATGGATCCTATAAATAAATTTCAGTTGCATCCATAGGATGAAATAATATGTGACCACTGAAGGTGGCAATAGATACAGAAGTACGTTGATGTGCAAAGATGTATTTTGTTACAGCTAGCGAGGAAAAAGAATTAGTTAAATT i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 3951476 77914 - 112612857 M a score=687296.000000 s hg38.chrUn_GL000218v1 60231 970 + 161147 ATACAT--ACAAACATACTATGGTCTTGTTTTATCAAAAAATATGTACAAAAT---ATAAAATTTGTAATTTCTGAGCATTTGTATTTTAAGTAAAGTTCTTTTCCTTTTTCTTATCTGTGATTGCTGCAGTGAGCATGTACAAAACTTCTAGT-AAAGTTTATTAATAAATAAATAATCCTTGGGAAGACAGGAATATGAATCTTACAATATTAAAAATAATTTCTCACTTTCTATTTTTTATCATTATTGAGTGTATTGTTATCTTCTTTGAACTTTTAGCCTCTTCAGAAGTAAAAAGGGAATATTTTTAT--GT--TTCCAGATTTCATTATCTATATATT-----------TTATTATGTACATATGTTTTTCTTATGTATTCATTCAAT----------TTATGCAAACAATGATAGattaatcatttcattttaattgtattctt----aaataaaa-ataacatataaat-attactattGCAAAAATATTGCTTTATAGGAGTT-TATTTAAAAATATTGAACTCCCCAACTGTATTTTTCCATTCTTTCATTCCATTTATTCATCAAACATAACCTGAGTACCTGTTATGTAGCAGACATATTCTGCTATCTCTCAGGTCCCTTCTATCCTTAAAAACTTCATGTTTACCTGCCCTGC-TGCACAAGCTGAGAGATTTAAAATAGGAATATTGGGACTTAATCTCCTTGAAACTTTGTCACCCAACTTTCAAACAAAAGCATTTCTGAAGTTAGAAAATAGTAGAAGATAAGCTTTAACTGCCCACCCAAAAGGTTATCAGTCTTAAATACTAATATTAATCATGGGAATGTCTTATTTACATATATTCTGTAAGCATAAATATTGAATAAAATGAGCCATATGTATTCATTTGAATCATGAGTTTCCTTTGTCTTCAATTTGTTTGAAAATCA----AGGAATTAATTTGTTTGAAAAATGCATTATTATTATTT--GTGTTCTATCCCCATAGTACCTTTAAG s panTro4.chr4_GL389838_random 5489 973 + 75234 ATACAT--ACAAACATACTATGGTCTTGTTTTATCAAAAA-TATGTACAAAAT---ATAAAATTTGTAATTTCTGAGCATTTGTATTTTAAGTAAAGTTCTTTTCCTTTTTCTTATCTGTGATTGCTGCAGTGAGCATGTACAAAACTTCTAGT-AAAGTTTATTAATAAAGGAATAATCCTTGGGAAGACAGGAATATGAATCTTACAATATTAAAAATAATTTCTCACTTTCTATTTTT-ATCATTATTGAGTGTATTGTTATCATCTTTGAACTTTTAGCCTCTTCAGAAGTAAAAAGGGAATATTTTTATCTGT--TTCCAGATTTTATTATCTATATATT-----------TTATTATGTACATATGTTTTGCTTATGTACTCATTCAAT----------TTATGCAAACAATGATAGATTAATCATTTCattttaattgtattctt----aaataaaa-ataacatataaat-attaCTATTGCAAAAATATTGCTTTATAGGAGTT-TATTTAAAAATATTGAACTCCCCAACTGTATTTATCCATTCTTTCATtccatttattcatcaaacataacctgagtacctgttatgtagcagacATATTCTGCTATCTCTCAGGATCCTTCTATCCTTAAAAACTTCATATTTACCTGCCCTGCCTGCACAAGCTGAGAGATTTAAAATAGGAATATTGGGACTTAATCTCTTTGAAACTTTGTCACCCAACTTTCAAACAAAAGCATTTCTGAAGTTAGAAAATAGTAGAAGATAAGCTTTAACTGCCCACTCAAAAGTTTATCAGTCTTAAATACTAATATTAATCATGGGAATGTCTTATTTGCATATATTCTGTAAGCATAAATATTGAATAAAATGAGCCATATGTATTCATTTGAATCATGAGTTTCCTTTGTCTTCAATTTGTTTGAAAATTG----AGGAATTAATTTGTTTGAAAAATGCATTATTATTATTTCAGTGTTCTATCCTCATAGTACCTTTAAG i panTro4.chr4_GL389838_random C 0 C 0 s ponAbe2.chrUn 11828502 978 + 72422247 ACACATACACAAACATACTATGGTCTTGTTTTAGCAAAAA-TATGTACAAAGT---ATAAAATTTGTAATTTCTGAGCATTTGTATTTTAAGTAAAGTTTTTTTCCTTTTTCTTATCTGTGATTGCTGCAGTGAGCATGTA-AAAACTTCTAGA-AAAGTTTATTATTAATGGAATAATCCTTGGGAAGAGAGGAATATGAATCTTGCACTGATAAAAATAATTTCTCACTTTCTATTTTTTATCATTATTGTGTGTATTGTTTTCTTCTTTGAGCTTTTAGCCTCTTCAGAAGTAAAAAGGGAATGTTTTTATCTGT--TTCCAGATTTTATTATCTATATATT-----------TTATTATGTAC--ATGTTTTTCTTATATACGCATTCCAT----------TTATGCAAACAATGTTAGATTAATCATTTCATTTTAATTGTATTCTT-TAAAAATAAAATAACACATATAAATAATTACTATTGCAAAAATATTGCTTTATAGGAGTT-CATTTAAAAATATTCAACTCCCCAACTGTATTTATCTATTCTTTCATTCCATTTATGCATCAAGCATAACCTGAGTACCTGCTATGTAGCAGACATACTCTACCATCTCTCAGGACCCTTCCATCCTTAGAAACTTCATGTTTACCTGCCCCGCCTGCACAAGCTGAGAGATTTAAAATAGGACTATTGGGACTTAATCTCCTTGAAACTTTATCTCCCACCTTTCAAACAAAAGCATTTCTCAAGTTAGGAAATAGTAGAAGATAACCTTTAACTGCCCTTTCAAAAGTTTATCAGTCTTAAATACTAATATTAATCATTGGAAAGTCTTATTTGCATATATTCTGTAAGTATAAATATTGAATACAATGAGCCATATGTATTCATTTGAATCATGAGTTTCCTTTGGCTTGAAGTTGTTTGAAAATCA----AAGAATTAATTTGTTTAAAAAATGCGTTATTGTTATTTAAGTGTTCTTTCCCCATAGTACCTTTAAG i ponAbe2.chrUn C 0 N 0 s nomLeu3.chr1a 40775960 981 + 122973662 ATACATACACAAACATACTATGGTCTTGTTTTAGCAAAAA-TATGTACAAAATATGATAAAATTTGTAATTTCTGAGCATTTGTATTTTAAGTAAAGGTTTTTTCCTTTTTCTTATCTGTGATTGCTGCAGTGAGCATGTACAAAACTTCTAGTAAAAGTTTATTATTAATGGAATAATCCTTGGGAAGAGAGGAATATGAATCTTGCACTGATGAAAATAATTTCTCGCTTTCTATTTTTTATCATTATTGTGAGTATTGTTATCTTCTTTGAGCTTTTACCCTCTTCAGAAGTAAAAAGGGAATGTTTTTATCTGT--TTCCAGATTTTATTATCTATATATT-----------TTATTATGTACCTATGTTTTTCTTATATACTCATTCCAT----------TTATG----CAATGATAGACTAATCATTTCATTTTAATTGTATTCTT-TAAAAATAAAATAACACATATAAATAATTACTATTGCAAAAATATTGCTTTATAAGAGTT-TATTTAAAAATATTGAACTCCCCAACTGTATTTATCCATTCTTTCATTCCATTTGTGCGTCAAGCATAACCTGAGTACCTGTTATGTAGGAGACATATTCTACTATCTCTCAGGACCCTTCTATCCTTAAAAACTTCATCTTTACCTGCCCCACCTGCACAAGCTGAGAGATTTAAAATAGGAATATTGGGACTTAATCTCCTTGAAACTTTATCTCCCACCTTTCAAACAAAAGTATTTCTGAAGTTAGAAAATAGTAGAAGATAACCTTTAACTGCCCTTTCAAAAGTTTATCAGTCTTAAATACTAATATTAATCATTGGAAAGTCTTATTTGCATATATTTTGTAAGTATAAATATTGAATAAAATGAGCCATACACATTCATTTGAATCATGAGTTTCCTTTGGCTTCAAGTTGTTTGAAAATAA----AAGAATTAATTTGTTTAAAAAATGCATTATTTTTATTTCAGTGCTCTTTCCCCATAGTACCTTTAAG i nomLeu3.chr1a C 0 I 79622 s macFas5.chr15 4031308 985 - 112612857 ATACAC--ACAAACATACTATGGTCTTGTGTTAGCCAAAATTATGTACAAAATAGGATAAAATTTGTAACTTCTGAGCATTTGTATTTTAA--AGTCTTTTGTTCCTTTTTCTTACCTTTGATTTCTGACGTGAGCATTTATGAAACTTCTAGTAAAAATTTATTATTAATGGAATAATATTTGGGAAGAGAGAAATATGAATCTTGTATAGATAAAAATAATTTCTCA----CTATTTTATATTATTATTGAGA-----GTTATCTTGTTTGAACTTTTAG---CTTCAGAAATAAAAAGGGAATCTTTTTATCTGTGCTTGCAGATTTTATTATGTATATATTTTTTATGTATATTTTTATGTATATATGTTTTTCTTATGTATAGATTCATTACATATGTGCATATGCAAACAATGATAGATTAATCATTTCATTATAGTTGTAGTCTTATAAAAATAACAAACAGCAAAT--ATTATTACTATCACGAAAATATTGGTTTATAGAAGTTGTATTTAAAAATACTGGGATCCCCAACTGT--------ATTCTGTCAATCCATTTATTCATCAAACATAACCTGAAAACCTGTTATGTAGCAGACATTTTGCACTATCTCTCAGGACCCTTCCATACTTAAAACCTTTATGTTTACCTGTTCTACCTGAGCAAGATGAGAGATTTAAAATGGGAATAGTAGGACTTAATCTCACTGAAGCTTTTCCTCCCACCTTTCAAGCAAAAGCATTTCTGAAGGTAGAAAACAGTAAGAGATAACCTTTAACTGCCCTTTTGAAAATTTATCAGTCTTAAATTCTATTATTAATAATTGGAAAGTCTGATTTGCATATATTCTGTAAATCTAAGTGTTGACTAAAATGAGCCATACCTGTTCATCTCAATCATTAGTTTTCTTTAGCTTCATGTT-TTTAAAAATCAAAGTAAGAAGTAATTTGTTTAAAAAGTA---TGTTGTTACTTCAGTGATCGTTCCCCATGGTACTTTTAGG i macFas5.chr15 M 77914 I 45377 e papAnu2.chr15 3749403 3173 - 107442819 I a score=19446.000000 s hg38.chrUn_GL000218v1 61201 205 + 161147 CAGGTGGACAAGCCAGCAACCTCACCCACTCAAGGAAGCCCAGATGGCCAGGTTCCAACAGCATGAGTAGCTGCCACCTGATGGCTGATGGAGCAGAGTCCTGAGGAAAAGCAGATGGCACTGGGGCCCTAACTCTAGGGCAGAAGAACTGATGTACTGTGACTGGCAGCATGTGAGGTTGGTGATTGGCCCACCTGTTCCTGGC s panTro4.chr4_GL389838_random 6462 205 + 75234 CAGGCGGACAAGCCAGCAACCTCACCCACTCAAGGAAGCCCAGATGGCCAGGTTCCAACAGCATGAGTAGCTGCCACCTGATGGCTGATGGAGCAGAGTCCTGAGGAAAAGCAGATGGCACTGGGGCCCTAACTCTAGGGCAGAAGAACTGATGTATTGTGACTGGCAGCATGTGAGGTTGGTGATTGGCCCACCTGTTCCTGGC i panTro4.chr4_GL389838_random C 0 C 0 e nomLeu3.chr1a 40776941 79622 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4032293 45377 - 112612857 I a score=61784.000000 s hg38.chrUn_GL000218v1 61406 253 + 161147 ACACCCTTGCAGAGGTGACCGGTTGCTCTTTGAGCCAGCTTGGCCTTGCCTGGCATGCACAAGCCTCGGTGCAACAACCGTGCTACAAATGGAGCCATATATAGGAAAGGAGAAGGAGGCTCAGGAGCAGGGTGTGCACTGACTTTGGGGCTCCAGTGCATGCCTCAGGGCTCCTATGGCACTGCAGGCTTCTTTGTTGCCAAGAGGCAGACCACAGGCCGTCTTGAGGAAGACTTTATGTACAAGTGCAGAA s panTro4.chr4_GL389838_random 6667 253 + 75234 ACACCCTTGCAGAGGTGGCTGGTTGCTCTTTGAGCCAGCTTGGGCTTGCCTGGCATGCACAAGCCTCGGTGTAACAACGGTGCTACAAATGGAGCCATATATAGGAAAGGAGCAGGAGGCTCAGGAGCAGGGTGTGCACTGCCTTTGGGGATCCAGTGCATGCCTCAGGGCTCCTATGGCACTGCAGTCTTCTTTGTTGCCAAGAGGCAGACCACAGGCCGTCTTGAGGAAGACTTTATGTACAAGTGCAGAA i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40856563 253 + 122973662 ACACCCTTGCAGAGGTGGCTGGTTGCTCTTTGAGCCAGCTTGGCCCTGCCTGGCATGCACAGGCCTCAGTGCAACAACTGTGCTGCAAATGGAGCCACATAGAGGAAATGAGCAGCAGGCTCAGGAGCAGGGTGTGCGCTGCCTTTGGGGCTCCAGTCCATGCATCAGGTCCCCTACAGCACTGTGGGCTTCTTGGGTGCCAAGAGGCAGACCACAGGCCATCTTGAGGAGGACTCTATGTTCAAGTGCAAAA i nomLeu3.chr1a I 79622 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4032293 45377 - 112612857 I a score=1146.000000 s hg38.chrUn_GL000218v1 61659 2 + 161147 AG s panTro4.chr4_GL389838_random 6920 2 + 75234 AG i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40856816 2 + 122973662 AG i nomLeu3.chr1a C 0 I 3 s macFas5.chr15 4077670 2 - 112612857 AG i macFas5.chr15 I 45377 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I a score=50396.000000 s hg38.chrUn_GL000218v1 61661 205 + 161147 CAGCCAGGATTACCACCCAGGGGACTCGGTCTTCTGTGGCCCTGGCCTGAC--AGAATTTGGCCCAAGGCAGGACAAGGTCACTCAGAGCAGTGTGTCAGTAGGTGGGGCCTGGGCATGCGAGGCAAGGCCAAGCTGGCTCAAAGAGCAAGCAGCCACCTCTGCAAGGGTGTGCCTGGAGCAGGTGGACCAGCCACCAACCTCACCC s panTro4.chr4_GL389838_random 6922 205 + 75234 CAGCCAGGATTACCACCCAGGGGACTCGGCCTTCTGTGGCCCTGGCCTGAG--AGAATTTAGCCCAAGGCAGGACAAGGTCACTCAGAGCAGTGTGTCAGTAGGTGGGGCCTGTGCATGCGAGGCAAGGCCAAGCTGGCTCAAAGAGCAAGCAGCCACCTCTGCAAGGGTGTGCCTGGAGCAGGTGGACCAGCCACCAACCTCACCC i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4077672 207 - 112612857 CAGCCAGGATTACCACCCAGGGGACTCAGCCTTCTGTGGCCCTGGCCAGACTTAGAATTTGGCACAAGACAGGACAAGCTCACTCAGCGCAGCTTGTTAATACCCAGGGCCTGTGCATGCCAGGCAAGGCCAAGCTGACTCAAAGAGCAACCAGCCACCTCTGCAAGGGTGTGCCAGGAGCAGGTGGACCAGCCACCAACCTCATCC i macFas5.chr15 C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=36018.000000 s hg38.chrUn_GL000218v1 61866 432 + 161147 ACTGAAAGAAGCCAGGATGGCCAGGTTTCCACAGCCTGAGTGGCTGCCTCCTGATGGCTGATGGAGCAGAGACCTGAGGAAAAGcaggtggcatatttaactctttaatccatcttaagttaatttttgtataaagaagatgGCACCAGTCCATGCCTCAGGGCTCATATGGCACTGTGGGCCACAGAAGGGTGAGTCCCCAGGGTGGTAATCCTGCCTGCTTTCTGCACTTGAACATAAAGTCCTCCTCAAGACGG------------------------------------------------------------------------CCTGTGGTCTGCCTCTTGGCCCCACCTTTAGGATAGAAGAACTGATGTACCACGTCTGGCAGTGAGTGAGGTTGGCGGCTGGTCCATCTGCTCCTGTTACACCCTTGCAGAGGTGGCTGCTTGCTCTTTGAGCCAGCTTGGCCTTGCCTGGCATACACAAGCCTCGCTGCAACAA s panTro4.chr4_GL389838_random 7127 504 + 75234 ACAGAAGGAAGCCAGGATGGCCAGGTTTCCACAGCCTGAGTGGCTGCCTCCTGATGGCTGATGGAGCAGAGGCCTGAGGAAAAGcaggtggcatatttaactctttaatcaatcttaagttaatttttgtataaagCAGATGGCACCAGTCCATGCCTCAGGGCTCATATGGCACTGTGGGCCACAGAAGGGTGAGTCCCCAGGGTGGTAATCCTGCCTGCTTTCTGCACTTGAACATAAAGTCCTCCTCAAGANNNNNNNNNNCCCCAGGGTGGTTAATCCTTGCCTCCCTTTTGGCCCTTGAAAATAAAGTCCCTCCTCAAGGCGGCCCTGTGGTCTGCCTCTTGGCCCCCCTTTTGGGGTAGAAGAACTGATGTACCACATCTGGCAGTGAGTGAGGTTGGCAGCTGGTCCATTTGCTCCTGGCACACCCTTGCAGAGGTGGCTGCTTGCTCTTTGAGCCAGCTTGGCCTTGCCTGGCATACACAAGCCTCGCTGCAACAA i panTro4.chr4_GL389838_random C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4077879 0 - 112612857 C a score=38.000000 s hg38.chrUn_GL000218v1 62298 1 + 161147 G s panTro4.chr4_GL389838_random 7631 1 + 75234 G i panTro4.chr4_GL389838_random C 0 C 0 s saiBol1.JH378298 200643 1 - 2064692 A i saiBol1.JH378298 N 0 I 129 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4077879 0 - 112612857 C a score=15710.000000 s hg38.chrUn_GL000218v1 62299 170 + 161147 TGTGCTACAAATGGAGCCATATAGAGGAAATGATCAGCAGGCTCAGGAACGGGGCGTGCACTGCCTTTGTGGCTCCAGTCCATGCCTCAGGGCTCGTATGGCACTGTAGGTTTCTTGGTCGCCAACAGGCAGACCACAGGCTTTCTTGAGGAGGACTTTATGTTCAAGTG s panTro4.chr4_GL389838_random 7632 170 + 75234 TGTGCTACAAATGGAGCCATATAGAGGAAATGATCAGCAGGCTCAGGAACGGGCCGTGCACTGCCTTTGTGGCTCCAGTCCATGCCTCAGGGCTCGTATGACACTGTAGGTTTCTTGGTCGCCAACAGGCAGACCACAGGCTTTCTTGAGGAGGACTTTATGATCAAGTG i panTro4.chr4_GL389838_random C 0 C 0 e saiBol1.JH378298 200644 129 - 2064692 I e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4077879 0 - 112612857 C a score=1419.000000 s hg38.chrUn_GL000218v1 62469 5 + 161147 CAGAA s panTro4.chr4_GL389838_random 7802 5 + 75234 CAGAA i panTro4.chr4_GL389838_random C 0 C 0 s saiBol1.JH378298 200773 5 - 2064692 CAGAA i saiBol1.JH378298 I 129 N 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4077879 0 - 112612857 C a score=19581.000000 s hg38.chrUn_GL000218v1 62474 207 + 161147 AGCAGCCAAGATTAGCACCCAGGGGACTGGGCCTTCTGTGGCCCTGGCCAGACTTAGAATTTGACCCAAGGCAGGACAAGCTGACTCGGTGCAGAGTGTCAGTACCTGGGACCTATGCATGCCAGGCAAGGCCAAGCTGGCTCAGAGCAACTAGCCACATCTGCAAGGCTGCACCTGTAGCAGGCAGACAAGCCAGCAACCTCAGCT s panTro4.chr4_GL389838_random 7807 207 + 75234 AGCAGCCAAGATTAGCACCCAGGGGACTGGGCCTTCTGTGGCCCTGGCCAGACTTAGAATTTGACCCAAGGCAGGACAAGCTGACTCGGAGCAGAGTGTCAGTACCTGGGGCCTATGCATGCCAGGCAAGGCCAAGCTGGCTCAGAGCAACTAGCCACATCTGCAAGGCTGCACCTGTAGCAGGCAGACAAGCCAGCAACCTCAGCT i panTro4.chr4_GL389838_random C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4077879 0 - 112612857 C a score=53711.000000 s hg38.chrUn_GL000218v1 62681 246 + 161147 ACTCAAGGAAGGAGGGATGGCCAGGTTCCCACAGCCTGAGTGGTTGCTGCCTGATGACTGATAGAGCAGAGGCCTGAGGAAAAGCATATGGCACTGGGGCCCTACCTCTAGGGTAGAAGAACTGATGTAAGCTGACCGGCAGCAAGTGAGGTTGGTGGCTGGTCCACCGGCTCCTGGCACAACCTTGCAGAGGTGGCCGGTTGCTTTTTGAGCCAGCTTGGCCTTGCCCGGCATGCACAAGTCT--GT s panTro4.chr4_GL389838_random 8014 246 + 75234 ACTCAAGGAAGGAGGGATGGCCAGGTTCCCACAGCCTGAGTGGTTGCCACCTGATGACTGATAGAGCAGAGGCCTGAGGAAAAGCATATGGCACTGGGGCCCTACCTCTAGGGTAGAAGAACTGATGTAACCTGACCGGCAGCAAGTGAGGTTTGTGGCCGGTCCACCGGCTCCTGGCAAAACCTTGCAGAGGTGGCCGGTTTCTTTTTGAGCCAGCTTGGCCTTGCCTGGCATGCACAAGTCT--GT i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4077879 243 - 112612857 ACTCAAGTAAACAGAGATGGCCAGCTTCTCACACCCTGAGTGACCACCACCTGACAGCTGATGAAGTGGAGGCCTGAGGAAAAGCAGATGGCACTGGGGCCCTGCTTCCAGGGCAGAATAACTGATTGACCCTGACTGGCAGTGA-----GTTGGTGACTGGTCCACCTGCTCCTGGCACACCCTTGCAGAGGTGGCTGGTTGCTCTTTGAGCCAGTTTGGCCTTGCCTGGCATGCACAGGCCTCAGT i macFas5.chr15 C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=3438.000000 s hg38.chrUn_GL000218v1 62927 6 + 161147 GCAACA s panTro4.chr4_GL389838_random 8260 6 + 75234 GCAACA i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4078122 6 - 112612857 GCAACA i macFas5.chr15 C 0 C 0 s nasLar1.chr13 38487416 6 - 126811233 GCAACA i nasLar1.chr13 N 0 N 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=36040.000000 s hg38.chrUn_GL000218v1 62933 151 + 161147 ACTGTGACACAAATGGAGCCACACAGAGAAAATGAGCAGCAGGCTCAGGAGCAGAGTGTGTGCTTCCTCGGGGGCTCCAGTCCATGCCTGAGGGTTCATATGGCACTGCGGGCTTCTTGGTTGCAAAGAGGTAGACCACAGGCCATCTTCA s panTro4.chr4_GL389838_random 8266 151 + 75234 ACTGTGACACAAATGGAGCCACACAGAGAAAATGGGCAGCAGGCTCAGGAGCAGGGTGTGTGCTTCCTCAGGGGCTCCAGTCCATGCCTAAGGGTTCATATGGCACTGTGGGCTTCTTGGTTGCAAAGAGGTAGATCACAGGCCATCTTCA i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4078128 151 - 112612857 ACTGTGCTACAAATGGAGCCACATAGAGAAAATGAGCAGCAGGCTCAGGAGCAGGGTGTGCGCTGCCCTTGGGGCCCCAGTCCATGCTTCAGGGCTCCTACAGCACTGTGGGCTTCTTGGGTGCCAAGAGGCAGACCACAGGCCATCTTGA i macFas5.chr15 C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=1356.000000 s hg38.chrUn_GL000218v1 63084 5 + 161147 GGAGG s panTro4.chr4_GL389838_random 8417 5 + 75234 GGAGG i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4078279 5 - 112612857 GGAGG i macFas5.chr15 C 0 C 0 s rhiRox1.KN299417v1 20221 4 + 52567 GGAG- i rhiRox1.KN299417v1 N 0 N 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=3314.000000 s hg38.chrUn_GL000218v1 63089 23 + 161147 TCTTTATGTGGAAGTGCAGAAAG s panTro4.chr4_GL389838_random 8422 23 + 75234 TCTTTATGTGGAAGTGCAGAAAG i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4078284 19 - 112612857 ----ACTGCTCAAGTACAGAAAG i macFas5.chr15 C 0 I 3 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I a score=14218.000000 s hg38.chrUn_GL000218v1 63112 157 + 161147 CAGCCAGGATTACCACCCGTGGGACTCGGCCTTTTGTGGCCCTGGCCTGACAGAATTTGGCCCAAGGCAGGACAAGCTCACTCAGAGCAACATGTCGGAACCTGGGGCCTGTGCATGCCAGGCTAGGCAAAGCTGGCTTAAAGAGCACCCAGAGCAT s panTro4.chr4_GL389838_random 8445 157 + 75234 CAGCCAGGATTACCACCCGTGGGACTCAGCCTTTTGTGGCCCTGGCCTGAGAGAATTTGGCCCAAGGCAGGACAAGCTCACTCGGAGCAACATGTCGGAACCTGGGGCCTGTGCATGCCAGGCAAGGCCAAGCTGGCTTAAAGAGCACCCAGAGCAT i panTro4.chr4_GL389838_random C 0 C 0 e nomLeu3.chr1a 40856818 3 + 122973662 I e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4078303 3 - 112612857 I a score=605054.000000 s hg38.chrUn_GL000218v1 63269 1358 + 161147 CCATTCTGGTGGATAAGCCAACCACATGGCCAGCTTCTGGGTCTGGGCACAGTGCCACATCTTCCATCGCTTTCTGACGTATCCCACCAACACTGAAGAGACAGCCTGGAGAGAGTGCAAGAGGAAGGCTGAGAAGGATGAGATAGTGAGTGCTGGCTTCTTTCTGACCCTCAGCACAACCCCAGGTGGTGACCCTCAACCTTTAGGGGTGGGAGAGCAAGACTGATGGCTTCAAATGCTTCCCCAAGAAGATGGAC-ACAGGCCACTCAGCTCATCCTCACAGCCAATGAGTTGACAAGCAAGCAGATGACAGTGACAGGCTTTTAAAAAGAGCATCAGAAGGTGGCCAGTTTTTCTTCAGCTTCAGCCAGGCCTTGGAACTTGACTAGGCCATCCACTTCACCAGAGATGCCTTCAAGAACATCAGTAAGCTCTTTGACAATGAGTCCAGGAATGACCTGGACCCAGCCATGGACCTGTTAGTGCTGTCTCAGGGACACCAGACCAACATCCTGGACATCATCCTCATACACAAGGAAGCTCTTACCAAAGTCACGGAGAACAGGCAACATGTGGCAGAAGGGAAGACAGAGATGCAGAGGCTGATGGCGTCATTATCACAGGAACAGGATTTCTTTGGCCACTTTGGCTGAAATTCACCACTTCCATCCAATTCACTCAAGCGAGAGACTTGAAATCACAGATGGACCATTTCTTGCAACAAGAGATACTATTTTTTCAAAAAGTCACCTAAAATTTGATAGTGTTGAATGACTAGCTATTCGATTGTGGACTTTTTCCAGTTCACGGGTACTTTCTACAGCAGAATGATAACAGTATCAAAGAGCTAGTGCCAGCTATCGGTGGTAGTACAAGGATGACTTTGTGCTCAACTGAAACCCAGCTGAATATAGAATTGTGTACGAAAGTGTTAATATGGTGATAGAATAGAAACAGTAGCAA--ATGAACTAAATCATACTATGAATGCCTACACTACCATTATAACTTTTTGAAGAATGGTAATACCACTTACTTTATTGCCTTTTGAAGTAGGAATATTTTAGTGGATATGCTATAGACCTGAAACCCTATAAAGAATCCCAAAGAAGCTGGCTGGATAAAGCCTGCTATGGATGTCTTTATACTCAAAGACTGATGAGGCAAttcgaatatgtgtccccaccaaatctcatgttgagttatgcttcctaatgttggaggtggatcctggtataaggtgattgaatcatgaaggcaaatttctcatgagtggttcagcactatccccttggtactctcctcacaatcatgagtgaattctcgtgagatctggccactgaaaactctatatca-ctccc s panTro4.chr4_GL389838_random 8602 1341 + 75234 CCATTCTGGTGGATGAGCCAACCACATGGCCAGCTTCTGGGTGTGGGCCCAGTGCCACATCTTCCATCGCTTTCTGACATACCCGACCAACACTGAAGAGACAGCCTGGACAGAGTGCAAGAGGAAGGCTGAGAAGGATGAGATAGTGAGTGCTGGCTTCTTTCTGACCCTCAGCACACCCCCAGGTGGTGACCATCAACCTTTAGGGGTGGGAGAGCAAGACTGATGGCTTCAAATGCTTCCCCAAGAAGATGGAC-ACAGGCCACTCAGCTCATCCTCACAGCCAATGAGTTGACAAGCAAGCAGATGACAGTGACAGGCTTTTAGAAAGAGCATCAGAAGGTGGCCAGTTTTTCTTCAGCCTCAGCCAGGCCTTGGAACTTGACTAGGCCATCCACTTCACCAGAGATGCCTTCAAGAACATCAGTAAGCTCCTTGCCAATGAGTCCAGGAAGGACGTGGACCCAGCCATGGACCTGTTAGTGCTGTCTCAGGGACACCAGACCAACATCCTGGACATCATCCTCATACACAAGGAAGCTCTTACCAAAGTCACGGAGAACAGGCAACATGTGGCAGAAGGGAAGACAGAGGTGCAGAGGCTGATGGCGTCATTATCACAGGAACAGGATTTCTTTGGCCACTTTGGCTGAAATTCACCACTTCCATCCAATTCACTCAAGCGAGAGACTTGAAATCACAGATGGACCATTTCTTGCAACAAGAGATACTATTTTTTCAAAAAGTCACCTAAAATTTGATAGTGTTGAATGACTAGCTATTCTATTGTGGACTTTTTCCTGTTCACGGGTACTTTCTACAGCAGAATGATAACAGTATCAAAGAGCTAGTGCCAGCTATCGGTGGTAGTACAAGGATGACTTTGTGCTCAACTGAAACCCAGATGAATATAGAATTGTGTAGGAAAGTGTTAATATGATGATAGAATAGAAACAGTAGCAA--ATGAACTAAATCATACTATGAATGCCTACACTACCATTATAACTTTTTGAAGAATGATAATACCACTTACTTTATTGCCTTTTGAAGTAGGAATATTTTAGTGGATATGCTATAGACCTGAAACCCTATAAAGAATCCCAAAGAAGCTGGCTGGATAAAGCCTGCTATGGATGTCTTTATACTCAAAGACTGATGAGGCAAttcgaatatgtgtccccaccaaatctcatgttgagttatgcttcctaatgttgg-----------------aggtgattgaatcatgaaggcaaatttctcatgagtggttcagcactatccccttggtactgtcctcacaatcatgagtgaattctcgtgagatctggccactgaaaactctatgtca-ctccc i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40856821 1342 + 122973662 CCAATCTGGTAGATG----AACCACACAGCCAGCTTCTGGGTGCAGGCACAGTGCCACATCTTCCGTCACTTCCTGATGTTCCCCACCAGTGCTGAAAAGACAGCCTGGAGACAGGGCAAGAGGAAGGCTGAGAAGGATGAGGTGGTGAGTTCCAGCTTCTTCCTGACCCTGAGCCCACCCCTAG--GGTGGCCCTCAACCTTTAGGAGTGGGAGAGCAAAACTGATGGCTTTGAGTGCTTCACCAAGAAGATGGACAACAGGGCACTCAGCTCAACTTCACAGCCAATGAGTTGACATGCAAGTTGATCACAGTCACAGGCTTTAAGAAAGAGCATCAGAAGGCAGCCAGTTCTTCTTCCACCTCAGCCAGGCCTTGGAGCTGGAACAGGCCAT-CACTTCACCAGAGATGCCTTCAACACCATCAGTGAGCTCTTTGCCAATGAGCCCAGCCAGGAACTGGACCCAGTCATGGCCCTCTTAGTACTATCTCAGGGACACCAGACCAACATCCCGGACATCATCCACATACACAAGGAAGCTCTTACCAAAGTCATGGAGAGTAGGCAACATGTGACAGAAGGGAAGACAGAGGTGCAGAGGCTGATAACGTCAGAATCACAGGAACAGGATTTTTTGGGACACTTTGGCTGAAATTCACCACTTCCATCCAATTC----------GAGACATGAACTCACAGATGCAGGATTTCTTGCAACAAGAGATACTGTTTTTTCAAAAAGTCACCCAGGATTTGATAGTGTTGAATGACTAGATACTCCACTGTGGACTGTTTCCAGTTCAGGGATACTTTCTATAGCAGAATAATAACACTGGCAAAGAGCTAGTGCCAGCTATTGGTGGTAGGACAAGGATGGTTTTGTTCTCAATTGAAACTCAGCTGAATGTAGAATTGTGTAGGAAACAGTTAGTATGGTGATAGAATAGAAAGAGTAGCAAACATGAAGTAAACCATGCTATGAATTCCTACACTACCATTGTAACTTTTGAAAGAATG---ATACCACTTATTTTATTGCTTTTTGAAGGATGAATATTTTAGTATATATGCTGTAGACCTCAAACCCTGTGAAGAGTCTCAAAGAAGCTGGCTGGATAAAGCCTGCTGTGGATGTCTTTATATTCCAAGATTGGtgatgcaattcgagtatgtgtccccacgaaatctcatgttgaattatatttcctaatgttgaaggtggatcctggtataaggtgattgaatccggaaggcaaatttctcatgaatggtttagcaccatcctcttgctactgtccttacaatcatgagtgacttctcatgagatctggtcattgaaaactctatgtcacctccc i nomLeu3.chr1a I 3 C 0 s macFas5.chr15 4078306 1337 - 112612857 CCAATCTAGTGGATG----AACCGCACGGCCAGCTTCTGGGTGCGGGCACAGTGCCACATCTTCCATCACTTCCTGATGTGCCCCACCAGCACTGAAG----AGCCTGGAGACAGGGCAAGAGGTAGGCTGAGAAGGATGAGATGGTGAATTCCAGCTTCTTCCTGACCCTGAGCCCACCCCCAG--GATGACCCTCAACCTTTAGGAGTGGGAGAGCAAGATTGACAGCTTCGAGTGATTCACCAAGAAGATGGACAGCAGGACGCTCAGCTCAACTTCACAGCCAGTGAGTTGACATGCAAGCAGATGACGGTGACAGGCTTTAAGAAAGAGCATCAGAAGGCAGCCAG---TTCTTCAGCCTCGGCCAGGTCTTGGAGCTGGAGCAGGCCAT-CACTTCACCAGAGATGCCTTCAA---CACTGATTGGCTCTTTGCCAATCAGCCCAGGCAGGACCTGGACCCAGTCATGGACCTGTTAGTGCTGTCTCAGGGACACCAGACCAAAATCCTGGACATCATCCGTATACACAAGGAAGCCCTTACCAAAGTCATGCAGAGCAGGCAACATGTGGCAGAAGGGAAGACAGAGGTGCAGAGGCTGATGACGCCAGAATCACAGGAACAGGATTTTTTTGGCCACTTTGGCTGAAATTCACTGCTTCCATCCAATTC----AAATGAGAGACATGGACTCGCAGATGCAGTATTTCTTACAACAAGAGATACTAGTTTTTCAAAAAGTTACCCAGGAATTGGTAGTGTTAAATGACTAGATACTCCTTTGTGGACTGTTTCCAGTTCAAGGATACTTTCTACAGCAGAATAATAACACTAAAAAAGAGCTAATGCCAGCTGTTGGTGGTAGGACAAGGATGCTTTTGTTCTCAGTTGAAACTCAGCTGAATATAGAATTGTGTAGGAAACAGTTAATATGGTGATAGAATAGAAAGAGTAGCAAAGATGAACTAAATCATGCTATGATTGCCTACACTACCAGTGTAACTTTTGGAAGAAAG---ATACCACTTACTTTATCGCTTTTTAAAGTATGAATATTTTAGTATATATGCTGTAGACTTCAAACCGTGTGAAGAGTCTCAAAGAAGCTGGCTGTATAAAGCCTGATGTGGATTTCTTTATACTCAAAGACTGAtgatgcaatttgaatatatgtccccaccaaatctcatgttgaattatatttcctaatgttgaaggtagatcctggtctaaggtgattgaatcctgaaggcaaatttctcatgaatggtttagcaccatcctcttgctactgtcctcacaatcatgagtgacttctcatgagacctggtcattgaaaactctatgtcacctcc- i macFas5.chr15 I 3 I 6129 e papAnu2.chr15 3749403 3173 - 107442819 I a score=183256.000000 s hg38.chrUn_GL000218v1 64627 763 + 161147 tactctccgtgatttcctcttgccatatgagacaattcactctttcattaccttgcacaatgattgaaagatttctgaggccccccagaagcagaag-cactaagcttcctgtccactctgcagaaccatgagccaattaaacctcttttTCAAAATAAATCTTACCAAAAATGGCAAAtgaggactggagcattgctataaagatacctgaaaatgtggaagcaacttcggaactgggtaatgggtagaggttggaagagtttggagggctccaaagaagacagacagatgagaacatttttggaccatcttagagactggttaaatggcagtgacaagaatgctgacaaaaacatggacagtgaaggccaggctgagggggcctcagataaaaataagaaggtttctggaaaatgtctcccttttggatatggaaagcttacaaaatgcctgtaccatcattgtaccttagacacagtgaacttgctttttatttcagagactcgtaggcaaaagagaatgtagccttgacccagatgagactttggactttgtaactttgagttaatgctgaaatgagttaagaatttgggagactgctggcaaggcatgactgtattttgcaatgtgagaaggacatgagatttgtggggtcagggacagaataatacggtttttctctatgccccttccaaagctcatgtgaaagtacactccctaatgttagagtcggggcctaggtggaaaaagctttaatcataaa s panTro4.chr4_GL389838_random 9943 760 + 75234 tactctccgtgatttcctcttgccatatgagacaattcactctttcattaccttgcacaatgattgaaagatttctgaggccccccagaagcagaag-cactaagcttcctttccactctgcagaaccatgagccaattaaacctcttttTCAAAATAAACCTTACCAAAAATGGCAAAtgaggactggagcattgctataaagatacctgaaaatgtggaagcaacttcggaactgggtaatgggtagaggttgaaagggtttggagggctccaaagaagacagacagatgagaacatttttggaccatcttagagactggttaaatggctgtgacaagaatgctgacaaaaacatggacagtgaaggccaggctgagggggcctcagataaaaat---aaggTTTCTGGAAAatgtctcccttttggatatggaaagcttacacgatgcctgtaccatcactgtaccttagacgcagtgaacttgccttttatttcagagactcgtaggcaaaagagaatgtagccttgacccagatgagactttggactttgtaattttgagttaatgctgaaatgagttaagactttgggagactgctggcaaggcatgactgtattttgcaatgtgagaaggacatgagattcgtggggtcagggacagaataatacggtttttctctatgccccttccaaaactcatgtgaaagtacactccctaatgttagagtcggggcctaggtggaaaaagctttaatcataaa i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40858163 753 + 122973662 tactctgcgtgttttcctcttgccatgtgagaca----actctttcttcaccttgcatgaagattgaaagatttctgaggcctcccagaaacagaagccactatgcttcctgtctaccttgcagaaccatgagccaattaaacctcttttTCAAAATGAATCACACAGAAAATGGCAAAtgaggactggagcattgctataaagatacctgaaaatgtggaagcagctttggaactaggtaatggacagaggttggaagagtttgtagggctcaaaagaagacagatagatgagaaaatgtttggaccatcttagagactggttaaatggttgtgacaaaaatcctgacagaaacatggacagtgaaggccaggctgaggaggcctcagatagaaataagaagctttctgggaaatggcttccttttggatatggaaagtttacacaatgcctgtaccatcattgtaccttagaagtagtgaacttgctttttatttcagaggctcataggaaaaaaagactgtagccttgactcagatgagactttggacgttgtaactttgagttaatgctgaaatgagttaagactc-------atgctggcaaggcatgattgtattttgcaatgtgagaaggacatgacgtttgtggggtcagggacagaataatagggtttggctctgtgtccctatcaaaactcatgtggaactatactccctaacattagaggcagggcctaggtggaaaaaaatttagtcataaa i nomLeu3.chr1a C 0 C 0 e papAnu2.chr15 3749403 3173 - 107442819 I e macFas5.chr15 4079643 6129 - 112612857 I a score=105105.000000 s hg38.chrUn_GL000218v1 65390 187 + 161147 ggtgtggg-agtggatccttcacaaatggcaaagcaccaagcccttaatgccatcctcctga----tagtgagttctcatgagatctagtagtttaaaaggctgtggaacctctttcgtctctctgtcttgttccaacttttgccatatgaaacatgtcattgccgcttggatttccggtgtggttAGGAGG s panTro4.chr4_GL389838_random 10703 191 + 75234 ggggttgg-agtggatccttcacaaatggcaaagcaccaagcccttaatgccatcctcctgagagtgagtgagttctcatgagatctagtagtttaaaaggctgtggaacctctttcctctctctgtcttgttccaacttctggcatatgaaacatgtcattgccgcttggatttccggtgtggttAGGAGG i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40858916 186 + 122973662 atggtgcg-ggaagatccttcacgaatgataaagcaccatccccttgatgctgtcctcctga----tagtgagttctcatgagatctggttgtttaacagtctgtggaacctctttcctcactctgtcttcctcctactcctgccataggagacagctcattgtc-cttggccttctggtttaattaggagg i nomLeu3.chr1a C 0 I 7000 s macFas5.chr15 4085772 171 - 112612857 GGTGtgggtggtggttccttcaccagtggctaatc------ttcttgatgctga---------------tgagttctcatgagatctggttgtataacaggatgtggcacctccttcttctctctgtcttgctcctactcctgccggatgaaatatctcattgccgcttggccttctggtgtggttagaagg i macFas5.chr15 I 6129 C 0 s papAnu2.chr15 3752576 182 - 107442819 GGTGTGGGTGGCGGTTCCTTCACCAGTGGCTAACC------TTCTTGATGCTGATcgcctga----tagtgagttctcatgagatctggttgtacAACAGGATGTggcacctccttcctctctctgtcttgctcctaCTCCTGCCGGATGAACTATCTCATTGCCGCTTGGCCTTCTGGTGTGGTTAGAAGG i papAnu2.chr15 I 3173 C 0 a score=414731.000000 s hg38.chrUn_GL000218v1 65577 1017 + 161147 GGCCTGATCAGTGTGGGCCTGGTCAGTGGAC-------------CTAGGTCAGTGAGGACTATTTAGTGGGATCGTGGTCAGCAGGCGTCTGCTTAAAGAGGGTCTCATTAGTGGGGTCTAGTAGTGGGGGTTTTGGTGAGTGGCGACCTATTGGCTGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACCTGGGCTGTGGGGCTTGATCAGTGGAGACCTGGTCAGCTGGGG-TTAGTGCTGGCCTGGTCAGCATGGGCTGGGGCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGGACTGGGCACATGGGACCTAGTCAGCAGACCCTGGTGGGCGTGTcctcatcagtgaggcccttgtcagtggggccctggtcagggcagccttgtcagcgggacctaatctgtagtgtcctggtcagagaggacttggtcagtgGTGACTTTTGTAG-CACTG---ATCTACAGGGTGACCTGGTCAGCGGGGATCTCAGCATTTGGTGCCAGTTCAGTGGGGTCTACTCACTAGGGTCCCAGTCAGGGGCATCTGGTGATCTTAGGCCTGGTTATTAGGGGCCTGATCAGTGGCAACCTGTTCCCTGGAGGCCTGGTCAGTGGAGCCTCATCTCTGGGGCCAGGGAATGAGGTCATGATCAGTGGAAcctgatcagtgaggccttgtcaataatgacctagtcagtgaggacttgttagtaaggacttggtcc--------------gtgagg---------------ccatgtcagtaaggtcctggtcggtggagtccttgtcattgTGTGCCCGG-CAGTGGGggccttgtgagtggggcctggtcatgagggtctaatcagtgagggtgtcatcagggaggacctgatgtgtggggtctggtcagcagggacctggtcaatgTGGGCTGCTGAGCACTGCTTGGATAAGCCAGGTGCAATGTGCATTATTGAAGGCCCTGTGGACAGCTGGGATAGCCCAGTGATGCCCAAGGGCCTAGTCAAAAGTGGACAAAGCACGTGTTTGGATGGACCTGGGAGAT s panTro4.chr4_GL389838_random 10894 1031 + 75234 ggcctgatcagtgtgggcctggtcagtggac-------------ctaggtcagtgaggactatttagtgggatcgtggtcagcaggggtctgcttagagagggtctcattagtgGGGTCTAGTAGTGGGGGTTTTGGTGAGTGGGGACCTATTGGCTGCCAGTTGTTTGGTGTCTGGTCAGTGCAAACCTGGGCTGTGGGGCTTGATCAGTGGAGACCTGGTCAGCTGGGGCTTAGTGCTGGCCTGGTCAGCATGGGCTGGGGCACTGGTGACCAGGTCAAGGGGTGCTATTCAGTGGAGGACTGGGCACATGGGACCTAGTCAGCAGACCCTGGTGGGCGTGTcctcatcagtgaggcccttgtcagtggggccctggtcagggcagccttgtcagcgggacctaatctgtagtgtcctggtcagagaggacttggtcagtgGTGACTTTTGTAG-CACTG---GTCTACAGGGTGACCTGGTCAGCGGGGATCTCAGCATTTGGTGCCAGTTCAGTGGGGTCTACTCACTAGGGTCCCAGTCAGGGGCATCTGGTGACCTTAGGCCTGGTTATTAGGGGCCTGATTAGTGTCAACCTGTTCCCTGGaggcctggtcagtgg-gcctcatcttgggggcaagggaatgaggtcatgatcagtggaacctgatcagtgaggccttgtcaataatgacctagtcagtgaggacttgtcagtaaggacttggtccatgaggccttgtcagtgagg---------------ccttgtcagtaaggtcctggtcagtggagtccttgtcattgTGTGCCTGG-CAGTGGGggtcttgttagtggggcctggtcatgagggtctaatcagtgagggtgtcatcagggaggacctgatgtgtggggtctggtcagcagggacctggtcaatgTGGGCTGCTGAGCACTGCTTGGATAAGCCAGGTGCAATGTGCATTATTGAAGGCCCTGTGGACAGCTGGGATAGCCCAGTGATGCCCAAGGGCCTAGTCAAAAGTGGACAAAGTACGTGTTTGGATGGACCTGGGAGAT i panTro4.chr4_GL389838_random C 0 C 0 s macFas5.chr15 4085943 1007 - 112612857 cctctgatcagtgtgggcctggtcagtggactagtcagttgggacttggtcagtgaggcctatttattgggggcgtggtcagcaggggtctgcttagAGAGGGTCTCATTAGGGGGATCTAGTAAT-GGGGTCTTGGTGAGTAGGGACCTAGTGGCAGCCACTTGTTTGGTGTCTGCTCAGTGTAAAACTGGGCTGTGGGACTTTGTCAGTGGAGA--------------------------CCTGGTCAGCATGGGCTGGGTCACTGGTGACCAGGTCAAGGGGTGCTATTCCGTGGAGG-CTGGTCACATGGGACCTAGTCAGCAGGG---------CATGTcctcatcagtgaggttcttgttagtggggccctggtcagggcagcctggtcagtggaacctaatcagtggggacctgttcagagcgtgcgtggtcagtgGTGGCTTTTGTAG-CACTG---GTTTATGGGGTGACCTGGTCAGCGGGGATCTGAGCAGTGGTTGCCTATTCAGTGGGTCCTACTCACTAGGGTCACGGTCAGGGGCATCTGGTCACCTCAGGCCTGGTTAGTAGGGGTCTGGTCAGTGGCAGCCTGTTCCCTGGaggcctggtcagtggggcctcatctgtggggccaggcagtggggtcatgatcggtggaacctgattagtgaggccttgtcagtaaggacctggtcagtgaggccttgtcagtaagaacctggtcagtgaggcctcgtcagtaaggacctgatcactgggacctggtcagtgaggctttgtca-gtgagcccctggtcagtaaggtcctggtcactgggggcctggttagtgggg-ctggtcatgggattctaatcagt---------------gaggacctgATGTGCAGGATCTGGTCAGCAGGGACCTGGTCAGCAGGGGCTACTGAGCACTGCTGGGAGATGTCAGGTGCAATGCACATTATCAAGGGCCCTGTGGACAGCTGGGATGGCCCAGTGGTGCCCATAGACCCAGTCAAAAGTGGACAAAGCAGGTGTTTGGATGGACCTGGGAGAT i macFas5.chr15 C 0 C 0 s papAnu2.chr15 3752758 956 - 107442819 CCCCTGATCAGTGTGGGCCTGGTCAGTGGACTAGTCAGTTGGGACTTGGTGAGTGAGGCCTATTTATTGGGGGCGTGGTCAGCAGGGGTCTGCTTAGAGAGGGTCTCATTAGGGGGATCTAGTAGTGGGGGTCTTGGTGAGTGGGGACCTAGTAGCAACCACTTGTTTGGTGTCTGGTCAGTGTGAAATTAGG--------------------------------------------------------------------------------CAGGTCAAGGGGTGCTATTCAGTGGAGGCCTGGTCACATGGGACCTAGTCAGCAGGGCCTGGTGGCCATGTCCTCATCAGTGAGGCCCTTGTCAGTGGGGTACTGGTCACGGCAGCCTGGTCAGTGGAACCTAATCAGTGGGGGCCTGGTCAGAGAAGGCTTGGTCAGTGGTGGGTTTTGTAGCCACTGGGAGGCTATGGGCTGACCTGGTCAGTGGGGATCTGAGCAGTGGGTGCCTATTCACTGGAGCCTACTCACTAGGGTCACAGTCAGGGGCATCTGGTCACCTAAGGCCTGGTTAATAGGGGCCTGGTCAGTGGCATCCTGTTCCCTGGAGGTCTGGTCAGGGGGGCCTCATCTGCGGGGCCAGGCAATGGGGTCATGATCGGTGGAACCTGATCAATGAGGCCTTGTCAGTAAGAACCTGGTCAGTGAGGCCTTGTCAGTAAGGACCTTGTCAGTGAGGC----------------------------CCTGGTTAGTAAGATCCTGGTACGTGGGGTCCTGGTCATTGTGGGCCTGG-CAGCAGGGGCCTGGTTAGTGGGGCCTGGTCATGGGGTTCTAATCAGTGAGGGTGTGGTCAGGGAGGACCTGATGTGCGAGATCTGGTCAGCAGGGACCTGGCCAATGGGGACTGCTGAGCACTGCTGGGAGATGTCAGGTGCAATGCATGTTATCGAAGGCCCTGTGGACAGCTGGGATGGACCAGTAGTGCCCAAAGGCCCAGTCAAAAGTGGACAAAGCAGGTGTTTGGATGGACCTAGGAGCT i papAnu2.chr15 C 0 C 0 e nomLeu3.chr1a 40859102 7000 + 122973662 I a score=20968.000000 s hg38.chrUn_GL000218v1 66594 25 + 161147 CCTGCTCAGAGATTCTGACAGGACA s panTro4.chr4_GL389838_random 11925 25 + 75234 CCTGCTCAGAGATTCTGACAGGACA i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40866102 25 + 122973662 cTTGCTCAGAGATTTTTACAGGACA i nomLeu3.chr1a I 7000 C 0 s macFas5.chr15 4086950 25 - 112612857 CCTGCTCAGAGATTTTGACAGGACA i macFas5.chr15 C 0 I 317 s papAnu2.chr15 3753714 25 - 107442819 CTTGCTCAGAGATTTTGACAGGGCA i papAnu2.chr15 C 0 C 0 a score=2889.000000 s hg38.chrUn_GL000218v1 66619 7 + 161147 AAGGTAA s panTro4.chr4_GL389838_random 11950 7 + 75234 AAGGTAA i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40866127 7 + 122973662 AACGCAA i nomLeu3.chr1a C 0 C 0 s papAnu2.chr15 3753739 7 - 107442819 AAGGTAA i papAnu2.chr15 C 0 C 0 e macFas5.chr15 4086975 317 - 112612857 I a score=142721.000000 s hg38.chrUn_GL000218v1 66626 173 + 161147 AGGAAGGGCCAGAGTGGCTGCAGAGATGGTCACAGTCTATGGGCTGCACAGGATGAAGGAGGCCAGGGAACAGGCAGGGTGGGCAGTTGGGGTTCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTGTGAGGGCTTTGGGGGCGTCAGGTTGGGTAGGCTCCAGG--CAC s panTro4.chr4_GL389838_random 11957 173 + 75234 AGGAAGGGCCAGAGTGGCTGCAGAGATGGTCACAGTCTATGGGCTGCACAGGATGAAGGAGGCCAGGGAATAGGCAGGGTGGGCAGTTGGGGTTCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTGTGAGGGCTTTGGGGGCGTCAGGTTGGGTAGGCTCCAGG--CAC i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40866134 175 + 122973662 AGGAAGGGCCAGAGTGGCCGGTGAGATGGTCACAGTCTATGGGCTGCACAGGATGGAGGAAGCCAGGGAAAAGGCAGGGTGGGCAGCTGGGGTGCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTCTCAGTACTGTGGGGGCGTCAGGTGGGGTGGGCTCCAGGTACAC i nomLeu3.chr1a C 0 C 0 s macFas5.chr15 4087292 173 - 112612857 AGGAAGGGCCAGAGTGGCTGGTGAGATGGTCACAGTCTATGGGCTGCACAGGATGAAGGAAGCCAGGGAACAGGCAGGGTGGGCACCTGGGGTGCAGGGAGAGGCAGGTGCATGCTGGGAGGTCAGACCCTGTGAGGACTGTGGGGGTGTCAGGTGGGGTGGGCTCCAGG--TGC i macFas5.chr15 I 317 N 0 s papAnu2.chr15 3753746 173 - 107442819 AGGAAGGGCCAGAGTGGCTGGTGAGATGGTCACAGTCTGTGGGCTGCACAGGATGGAGGAAGCCAGGGAACAGGGAGGGTGGGCAGCTGGGGTGCAGGGAGACTTAGGCGCATGCTGGGAGGTCAGACCCTGTAAGGACTGTGAGGGTGTCAGGTGGGGTGGGCTCCAGG--TGC i papAnu2.chr15 C 0 I 2 a score=2359.000000 s hg38.chrUn_GL000218v1 66799 5 + 161147 TCtca s panTro4.chr4_GL389838_random 12130 5 + 75234 TCtca i panTro4.chr4_GL389838_random C 0 C 0 s nomLeu3.chr1a 40866309 5 + 122973662 CCTCA i nomLeu3.chr1a C 0 N 0 s papAnu2.chr15 3753921 5 - 107442819 CCTCA i papAnu2.chr15 I 2 N 0 a score=123154.000000 s hg38.chrUn_GL000218v1 66804 1652 + 161147 ctcacataggattccagaacactgctacaaggctctgagtgtttgtccctcacataggattccagaacactgctgccattgtctgaatgtttgtcccccacataggattccagaagcctgctgctggggtctgaatgtttgtcccccaactaggattccagaacactgctgcgagggtctgaatgtctgtccctcacatatgattctagaacattgatgctagggtctgtatgtttgcccttaacataagatttcaaaacactgctcctgaattctgaatgtttgtccttcacataggaatacagaacactgctgctggagtctggaagtttgtcactcacatagaattccagaacactgctgtgaggatctgaatgtttgaccctcacatgggattccagaacactgctgcgagggtctaaatgtctgtccctcacataggtttcctgaacaatgttatgaggttctgaatgtttatccctaacataggatttcagggcactcctgctgtgctctgaatgcttctccctcacataggattccagaacactgctacgagggtctgaatgtttgtccctcacataggattccagaatactcctgctatggtcttaatgcttgtccctcacataggattccagaacattcatgttggggtctgaatgtttgcccttatcataggatttcagaacagtgctcctggggtctgaatgtttgttcttcatataggatttaagaacactcctgctttggtctgaaagtttgtccctcacataggattccagaactctcctgctgtggtctgaaagtttgtccttcacgtaggattccagaacactgctgctgtggtttgaatgtttgtccctcacataagattccagaacactgctacgagggtctgaatgtttgtccctcacataggattcctgagcattgttgccgtggtctgaatgtttgtacctcacataggattccagaacagtgctacgagggtctgaatgtttgtccctcacataggattcctgagcattgttgtcgtggtctgaatgtttgtacctcacataggattccagaacagtgctacgagggtctgaatgtttgtccctcacataggattccagaacacttctgctggtgtctgaatgtttgtacctcacataggattccagaacactgctgctggggtctgaacgtctgtccctcagataggattctagaacactgctgttggggtttgaatgtctgtccctcacatagaattccagaacactgctgcgagtgtctgaatgtttgtcccgcagatgggattctagaacactgctgtgagggtctaaatgtctgtccctgacataacattccagcacactgctacaaggttttgaaatgtttgtccctcacataggattacagagcactcctgctgtggtctgaatgtttgcccctcacataggattccagaacatt-cctgctgtggtctgattgtt---cctcaaataggattccagaacactgctacgaggttctgaatttttgcccctcacataggattgcagaacactgctacaagggtttgaaagttttcccctcacataggattccacaacactcctgctgtgatctgaatgtttgtccctcacataggattcccgagcact s panTro4.chr4_GL389838_random 12135 1649 + 75234 ctcacataggattccagaacactgctacaaggctctgagtgtttgtccctcacataggattccagaacactgctgccattgtctgaaagtttgtcccccacataggattccagaagcctgctgctggggtctgaatgtttgtcctccatctaggattccagaacactgctgcgagggtctgaatgtctgtccctcacatatgattctagaacattgatgctagggtctgtatgtttgcccttaacatatgatttcaaaacactgctcctggattctgaatgtttgtccttcacataggaatacagaacactgctgctggagtctgaaagtttgtcacttacatagaattccagaacactgctgtggggatctgaatgtttgaccctcacatgggattccagaacactgctgcgagggtctaaatgtctgtccctcacataggtttcccgaacaatgttacgaggttctgaatg----tccctaacagaggattccagagcactcctgctgtgctctgaatgcttctccctcacataggattccagaacactgctacaagggtctgaatgcttatccctcatataggattccagaacactcctgctgtgttctgaatgtttgttcctcacataggattccagaatactcctgccgtggtctgaatgtttgtccctcacctaggattccagaacattcatgctggggtctcaatgttt-cccttaacataggatttcagaacactgctcttggggtctgaatgtttgtcactcacataggattacagaacactgctgctggagtctgaatgtttgtcagtcacatagaattccagaacactgctacgagggtgtgaatatttttccctcacctagtattccagaacactgttgcaagggtctgaatgttggtccatcatataggattccagaacactgctgctgtggtctgaatgtttgtccctcacataggattcccgaacactgctactaggttctgaatgtttttcccacacctaggattccagaacacttctgctggtgtctgaatggttgttcctcacatatgattccaggacactgctacgagagtcttaatgtttgtccttcacataggattctagaacactgctcccgtggtctgaatgtttgtccttcacatagcattccggaacactgctgctggggtctgaatgtctgcccctcaaatcagattccagaacactgctgctggggtttgaatgtctttccctcacatagaattccagaacatggctgggagggtctgaatgtttgtccctcacatgggataccagaacactgctgcgagggtctaaatgtctctccctcacataagatttcaggacactgctacgaggttctg-aatgtttgtccctcacataggattccagagcactcctgctgtggtctgaatatttgtccctcacataggattccagaacactgccagatg-ggtctgaatgtttgccctcacataggattccggaacactactgctggggtctgaatgtttgaccctcacataggattccagaacactcctgctgtggtctgaatgtttgaccctcacataggattccagaacactcctgctgtggtctgaaagtttgttcatcacgtaggactccagaacact i panTro4.chr4_GL389838_random C 0 N 0 a score=3075.000000 s hg38.chrUn_GL000218v1 70128 36 + 161147 gaggaattaggtgtgttctttgttaagcaggtagtc s panTro4.chr3 77142423 36 + 202329955 gaggaatcaggtgttttctttgttaagcaggtagtc i panTro4.chr3 N 0 I 8 a score=0.000000 s hg38.chrUn_GL000218v1 70164 13 + 161147 ttatttgtgggat e panTro4.chr3 77142459 8 + 202329955 I a score=381642.000000 s hg38.chrUn_GL000218v1 70177 4592 + 161147 agtgggatagcgttatttgaaagtggacttcaatttgttgtaaatgt-TACTgaggaattaagtgttttgtttgttaagcaggtagtcttatttgtgggatagtgggatagtgttatttgaaagtggacttgaattggttgtaaatgtatattgcaaattctgtggcaactagttaaaaaaaagttttaaaaagagaagtacatgctaagaaagacagggaaaatgtagtcatctaaaatcatcaatgaaaactgcaaaaggcagaaaaagagtggtagacaaaagaatggagactgaggagaatgaatagaaaacagtaacaaatatagtagatattaatccaatgatatcaataatcactttgaatgttaatggtatgaatgtaccaattcaaagataaagattgtcagagtctatcaaaagacagacacatcttgtttcactgcactttgctttattgtgttttgtgaccatgtgttttacatattgaaggtttgtggccaccctgcaataagcaggtctcactggcaccattgttcctacagcacgtgctcacttcacgtctccgtgtcacatttcggtcattctcacagtattttaagctttttattattgaatcggttatagtgatctgtaatcagtgatctttaatgctactgttgtcattgttttgggaaccacaaatcacaccaggataagacagcaaacaattgacaaatgcatttgttctgactgccccaccaatgggccatttctctttctctctctttttctcaggcttccttttattaacattaaaatgtggccaattaataaccctacaatagcctctatatgttcaagtgaaagaagagttgcatgtctgtcactttaaaccaaaaggaagaaataattaagcttagtgatgaaggcatgctgtaagcaagacaggccagtagctagacctcatgcaacaaacacttaaccaagttgtgaatgcaaaggaagtgttctggaaagaaatttaaagtactactccagtgaatacatgaatgataaaaagctaaacaatcttgctgctgttatgaagaaagtttaattggtctagatagaagataaaaaaaaacaaaaaaaattccattaagcctaagcctaactctctttttactttttttctttgt-------ttttgagacagagtttcattcttcttgcccaagctggagtacaatggcgtgatcttggctcatcgcaacctctgcctcccaagttcaagccattctcctgcctcagcatcccgagtagctgggattacaggcatgcaccaccacgcctggctaattttttgtatttttagtagagacggggtttctccacgttggtcagactggtgtcgaactcccgacctcaggtgatctgcccgcctcggcctcccaaagtgctaggattacaggtgtgacagccaccgcacccggtctcccttcaattctatgaagacttagagaggtgaggcagctgcagaagaaaagtctgaagctagaagagcttgtttcttgaggtttaaggaaaaaagtcatctccataacataaaagcgcaagataaagcagcaagtactgatggaaaaactgcagaaagctatctagaagataattgattaagatggctacactaaacagatttgcaatggagacaaaacagccttctactagaaggagatgccatccaggatgttcccagctagagaggagttgatgcctggctttaaggcttcaaaggacatgctgactcttttgttaaggcctaatgcaattggtgatgttaacttgaaaccaatgatgatttactattctgaaaatccaagggccctgaagaattatgataaaacacagctctgcctgtactctacaaatgggaacaaagcctggatgacagactattggtttacaaatatggtttactgaatatcttaagcccactgtcgacaactactgctcaagaaataagattcctttcaaagtattactgctcaatgacaatgccgctggtactcaagggcttttacagagatgtataaagagctgaatattgttttcatgcctactaacccaacattcattctggtgcccttggatcaaagaataatttcaactttcaagtcttatcacttaaaaa-tatatt-cataaagctatagcttctctagaaagtgattcctttgatggatctgggcaaaataattgaaaacctactggaaaggattcaacattctagatgccattgagaacattcatgatttaa---aaaagatcaaaatagcaacattaggagaagttggggccgggcttggtggctcacgcctgtaatcccagcactttgggaggccaaggcacgtggatcacgaggtcaggaatttgagaccagcctggccaacatagtgaaatcctgtctgtactaaaaacacaaaaaaaa-ttagctgggcctggtcgggggtgactgtaatcccaaacacttgggaggctgaggcaggagaattgcttgaacacgggaagtggaggttgcagtgagctgagatcgcat---cactgcactccagcccaggcaagacttcatctcaaaaaaaaaaaaaaaaaagagagaga--agttgggaagattattccaaccctcacagatgacac--aggggttcacgacttctgtggaggaagtaactgcagatatggtggaaataacaagagcactagaatcagagaaagagcctgaagatctggcgagactgcagcagcctctggagaaaacgtgagaggatgagttgctcccacggatgagcaaagaaagtggtttcttgagatgaaatctactcgtggtgaagacagtgtaaacaatgttgagatgacaacagatttacaataaact----tggtacagcagaaggaaggcttgacaggattgaacccaatgatttacaataatacataaacttagttggtacagccgtacgaaggtttgacagcattgcgtccaattttgaaagttctactgtgggtaaaaagctatca-------tcgtatgctacagttaattcttttgtgaaagggagagtcaattgacacagcaaacttcaacgttgtcttattttaagaaattgccacagccaccccaacgctcagcaaccaccaccttacattaacataagactctccatcagcaagaagactgaaacttggccaggtgcagtggctcacacctgtcatcccaacaccttgggaggccaaggtgggtggattgcttgagcccaggacgtcaaggcaacatggcaaaaccccatctctacaaaaaaaaaaaatacaaaaattagctggacatggtggcatgcacctgtagtcccagctagtcaggagtctgaggtgggggtttgattgagcatgaggttgaggctgcaattactccagcctgagccacagagtaaaaccctgtcacacacacaaaaaa-gattgcagctttctgaaggctcagatgactgttagcacttgttaacaataaagtatttgtaaattaaagtgtgcatactttgtagacatatgctattgcacactttatacagcacagtataaacatacttttacatgcactgggaaacaaaaagaaattgtataa------ttattgcagtggtctggaaccaaacccacatatatctctgatgcatgGCCGTCctgtattgtacacttaaaaaaatacttaagagggtatattttaggtgaaatggtcatctcatttttttttt-----------gagacggagtcacactctgttgcccaggctggagtgcagtggcacgatctcggctcactgcaagctctgcctcccgagttcacaccattatcctgcctcagtctcccgagtagctgggactacaggtgcccgccatcacacctggctaattttctgtatttttagtagaaacggggtttcactgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgccttggcctcccaaattgctgggattacaggggtgagccaccactcccggtctcattttttaaaaagggtgagaatgagaaatatatggggggtgatggtcaagtttacggtattatttgttgtgatgagtcctggggcgaatatttatctctatactcattaagatgtatatattcggtgtcacacgcctgcaatcccagcactttgggaggccgaggcaggtggatgatctgaggtcaggcgttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaaatgcaaaaattagccgggcgtgggggcgcacgcctgtgatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggatgcagaggttgcagttagctgagatcatgtcactgcactccagactgggcaacaagagtaaaacCTCCATAacacacacacacacacacacacacacacacacacaaggtatatattaaatatgtgtaatttttgtatgtcaaccacaccttaGttttattttattttatttttttgggacagagtctcactctgtcacccaggctggagtccagtggtgcaatcttggctcactgcaagctccacctcccag s panTro4.chr3 77142467 4615 + 202329955 agtgggacagtgttatctgaaagtggacttgaattcgttgtaaatgtatattgaggaattaggtgttttctttgttaagcaggtagtcttatttgtgggacagtgggatagtgttatttgaaagtggacttgaattggttgtaaatgtatattgcaaattctatggcaactagttaaaaaaa-gttttaaaaaaagaagtacatgctaagaaagacagggaaaatgtagtcatctaaaatcatcaatgaaaactgcaaagggcagaaaaagagtggtagacaagagaatgaagactaaggagaatgaatagaaaacagtaacaaatacagtagatattaatccaatgatatcaataatcactttgaatgttaatggtatgaatgtaccaattcaaagacagagattgtcagagtctatcaaaagacagacacatctcgtttcactgcactt-gctttattgtgttctgtgaccacgttttttacatattgaaggtttgtggccaccctgcaataagcaggtctcactggcaacatttttcctacagcatgtgctcacttcacgtctctctgtcacattttggtcattctcacagtaatttaagctttttattattgaatctgttatggtgatctgtaatcagtgatctttaatgctactattgtcactgttttgggaaccacaaatcacacccggataagacagcaaacaactgacaaacatgtgtgttctgactactccaccaacgggccatttctctttctctct--ttttctcaggcttctttttattaatattaaaatgtggccaattaataaccctacaatagcctctatgtgttcaagtgaaagaagagttgcatgtctgtcactttaaaccaaaaggaagaaataattaagcttagtgaggaaggtatgctataagcaagacaggccagtagctagacctcatgcaacaaacacttagccaagttgtgaacgcaaaggaagtgttcttgaaagaaatttaaagtactactccagtgaacacatgaatgataaaaagctaaacaatcttgctgctgttatgaagaaagtttaattggtctagatagaagattaaaaaaaa--------attccattaagcctaagcctaactctcctttttctttttttttttttcttttttttttgagacggagtttcgttcttcttgcccaagctagagtgcaatggcacgatctcggctcattgcaacctctgcctcccaagttcaagc-attctcctgcctcagcctcccgagtagctgggattacaggcatgcgccaccacgcccggctaatgttttgtatttttagtagagacggggtttctccacgttggtcacactggtgtcgaactcccgaactcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgacagccaccgcacccggcctctcttcaattctatgaaggctcagagaggtgaggcagctgcaaaagaaaagtctgaagctagaagagcttgtttcatgaggtttagggaaaaaagtcatctccgtaacataaaagtgcaagataaagcagcaagtactgatggaaaagctgcagaaagctatctagaagataactgattaagatggctacactaaacagattttcagtggagacaaaacagccttctgttagaaggagatgccatctaggatgttcccagcaagagaggagttgatgcctggctttaaggattcaaatgacatgctgactcttttgttaagggctaatgcatctggtgatgttaacttgaaaccaatgatgatttactattctgaaaatccaagggccctgaagaattattataaaaca--gctctgcccgtactctacaaatgggaacaaagcctggatgacagactatctgtttacaaatatggtttactaaatatcttaagcccactgttgacacctactgctcaagaaataagattcctttcaaagtattaccgctaactgacaatgctcctggtactcaagggcttttacagagatgtataaagagctgaatattgttttcatgcctactaacccaacattcattctgctgcccttggatcaaagaataatttcaactttcaagtcttatcacttaaaaaatatatttcataaagctatagcttctctagaaagtgattcctttgatggatctgggcaaaataattgaaaatctactcaaaaagattcaccattctagatgccattgagaacattcatgatttaataaagaagatcaaaatagcaacattaggagaagttggggatgggcatggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacaaggtcaggaatttgagaccagcctggccaacatagtgaaaccctgtctctactaaaaacaaaaaaaaaaattagctgggcctggtggggggtgcctgtaatccaaaatacgtgggaggctgaggcaggagaattgcttgaacccgggaggcggaggttgcagtgagctgagatcgtgttgtcactgcactccagcccaggcaagactccatctcaaaaaaaaaaaaaaaaaagagagagagaagttggcaacattattccaaccctcacagatgacactgaggggttcacgacttctgtggaggaagttattgcagatatagtggaaataacaagagcactagaatcagagacagagcctgaagatgtggtgagactgcagcagcctcgggagaaaacgtgagtggatgagttgcttccacggatgagcaaagaacgtggtttcttgagatgaaatctactcgtggtgaagacagtgtaaacattgttgagatgacaacagatttagaataaactcagttggtacagcagaaggagggcttgacaggattgaacccaatgatttacaataatacataaacttagttggtacagcagtacgaaggcctgacaggattgaatccaattttgaaagttctactgtgggtaaaaagctctcaaacaacatcgtatgctacagataattcttttgtgaaagggagagtcaattgacacagcaaacttcaatgttgtattattttaagaaattgccacagccaccccaaccctcagcaatcaccaccttacattaaggcaagaccctccatcagcaagaagactgcaacttggccaggtgcagtggttcacacctgtcatcccaacactttgggaggccaaggtggggggattgcttgagcccaggacgtcaaggcaacatggcaaaaccccatctctacaaaaaaaaaaaa------aattagctgcacatggtggcatgcacctgtagtcccagctagtcaggagtctgaggtgggggtttgattgagcaggaggttgaggctgcaactactccagcctgagccacagagtaaaaccctatcacacacacaaaaaaagactgcagcttgctgaaggctcagatgactgttagcacttgttaacaataaagtatttgtaaactaaggtgtgtacactttgtagacatatgctattgcaaactttatacagcacagtataaacatacttttacatgcactgggaaaccaaaagaaattgtataactcactttattgcagtggtctggaaccaaacccacatatatctctgatgcatgGCCGTCctgtattgtacacttaaaaaaaaacttaagagggtatattttaggtgaaatggtcatctaatttttttttttttttttttttgagacggagtcttgctctgttgcccaggccagagtgcagtggcatgatctcggcttactgcaagctccacctctcgggttcacaccattctcctgcctcagcctcccgagtagctgggactacaggcacccatcatcacacccagctaattttctgtatttttagtagaaacggggtttcactgtgttagccaggatggtcttgatctcctgacctcatgatccacccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgctcccggtctcattttttgaaaagggtgagaatgagaaatatttggggagtaatggtcatgtttatggcattatttgttttgatgagtccttgggtgaatacttatctctgaactcattaagacgtatatattcagtgtcagacgcctgtaatcccagcgctttgggaggccaaggcgggtggatcatctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctactaaaaaaatacaaaaattagccgggcataggggtgcacgcctgtgatcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggtggaggttgcagtgagccgagatcgtatcactgcactccagcctgggcaacaagagtaaaacctccgt----cacacacacacacacacacacacacacacacaaggtatatattaaatatgtgtaatttttgtatgtcaaccacaccttaattttattttatttt--ttttttgagacggagtctcgctctgtcacccaggctggagtccactggcgcaatctcggctcactgcaagctccacctcccag i panTro4.chr3 I 8 C 0 a score=48426.000000 s hg38.chrUn_GL000218v1 74769 202 + 161147 gttcacaccattctcctgcctcaacctccggagtagctggaactacaggcacccgccaccacgcccggctaattttttgtatttttagtagagatggcgtttcacagtgttagcccagatggtctcgatctcctgacgtgatctgcctgcctcagcttcccaaagtgctgcgattacaggtgtgagccaccgcgcccagACA s panTro4.chr3 77147082 202 + 202329955 gttcacaccattctcctgcctcaacctctggagtagctagaactacaggcacccaccacaacgccccgctaattttttctatttttagtagatacagcgtttcaccatgttagcccggatggtctcgaactcctgacatgatctgcctgcctcagcctcccaaagtgctgcgattacaggtgtgagccaccacacccagGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318272 201 + 202140232 gttcacaccattctcctgcctcagcctcc-tagtagctggaactacaggcacctgccaccatgcccggctaattttttgtatttttagtagagacggcgtttcactgtgttagcccggatggtctcaatctcctcacatgatctgcctgcctcagcctcccaaagtgctgctattacaggtgtgagccactgtgcccagGCA i ponAbe2.chr3 N 0 C 0 a score=121539.000000 s hg38.chrUn_GL000218v1 74971 253 + 161147 Atttttatttttttgagacagagcct---cactctgtcacccaggctggagtgcagtggcactatcttggctcactgcaacctctgcctcctatgttcaagcaattctcctgcctcagtctcccgagtagctgggactacagatgcatgctatcacgcctggctaattttttg-atttttaatagagatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcatgtgatctgcccacctcagcct s panTro4.chr3 77147284 253 + 202329955 Atttttatttttttgagacagagtct---cattctgtcacccaggctggagcgcagtggcactatcttggctcactgcaacctctgcctcccaggttcaagcaattctcccgcctcaggctcctgagtagctgggactacagatgcatgctatcacacctggctaattttttg-atttttaatagagatgggatttcaccatgttggccaggctggtctcaaactcctgacctcatgtgatctgcccacctcagcct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318473 253 + 202140232 Atttttatttttttgagacagagtct---cactctgtcacccaggctgcagtgcagtggcactatcttggctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcaggctcccgagtagctgggactacagatgcatgctatcacacctggctaattttttg-atttttaatagaaatgaggtttcaccatgttggccaggctggtctcaaactcctgacctcatgtgatctgcccacctcagcat i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35345827 257 + 155834243 atttttacttttttgagacagagtctcaccactctgtcaccaaggccagagcgccgtggcactatctttgctcactgcaacctcttccctctaggttcaagtgagtttcctgcctcagtctcttaagtagctgggactacggacgcatgccaccacacctggctagttttttgtctttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgaagtcatatgatctgcccatcttggcct i calJac3.chr7 N 0 C 0 a score=47962.000000 s hg38.chrUn_GL000218v1 75224 62 + 161147 cccaaagtgctgggattacaggtgtaagccactgcacctggcAATTTTTAAATATATATAAT s panTro4.chr3 77147537 62 + 202329955 cccaaagtgctgggattacaggtgtaagccactgcacctggcaatttttaaatagatataat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318726 62 + 202140232 ctcaaaatgctgggattacaggcataagccactgcacccagcaatttttaaatatatataat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77094 62 - 139590 cccagagtactaggattacaggcataagccactgcacccggcaatttttAAATATGTAAAAT i nomLeu3.chr21_GL397661_2_random N 0 C 0 s calJac3.chr7 35346084 62 + 155834243 cccaaagtgctgggattacaggcatgagccaccgcagccagcaatttttaagtatatgtaat i calJac3.chr7 C 0 C 0 a score=-881.000000 s hg38.chrUn_GL000218v1 75286 2 + 161147 TA- s panTro4.chr3 77147599 2 + 202329955 ta- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318788 2 + 202140232 ta- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77156 2 - 139590 TA- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346146 2 + 155834243 aa- i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 90360 2 - 1133132 -AA i tarSyr2.KE941085v1 N 0 I 53 a score=38758.000000 s hg38.chrUn_GL000218v1 75288 49 + 161147 AAATTTAATAAAAAACAGGTATTTGCAAGTTTCCGTTTTGTTATATGCT s panTro4.chr3 77147601 49 + 202329955 aaaattaatGAAAAACAGGTATTTGCAAGTTTCCATTTTGGTATATGTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318790 49 + 202140232 aaaattaataaaaaaCAGGTATTTGCAAGTTTCCGTTTTGGTATATGTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77158 49 - 139590 AAAATTAATAAAAAACAGGTATTTGCAAGTTTCCGTTTTGGTGTGTGTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346148 49 + 155834243 aaaattaataaaaaCCAGATATTTGCAAGTTTCTGATTTGGTATATGTT i calJac3.chr7 C 0 C 0 e tarSyr2.KE941085v1 90362 53 - 1133132 I a score=3910.000000 s hg38.chrUn_GL000218v1 75337 6 + 161147 TATTAT s panTro4.chr3 77147650 4 + 202329955 TATT-- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318839 6 + 202140232 TATTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77207 6 - 139590 TATTAT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346197 6 + 155834243 TATTAT i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 90415 6 - 1133132 TTTTAT i tarSyr2.KE941085v1 I 53 N 0 a score=503661.000000 s hg38.chrUn_GL000218v1 75343 667 + 161147 TCTTTATATTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACAAATAAATATGTCTGAAAtttt-ttcttttttc-tttttttttgagacagactctcattctgtcacccaggctggagtgcagtggtgcaatctcagctcactgcaacctccgcctcccagattcaagtgattctcctacctcagcctccagagtagctgggattacaggcacccgccatgacacccagctaacttttatatattttttttttctatttttagtaaagacagggtttcaccatgttggccagggtggtctccaactcccgacctcagatgatcctcctgcctcggcctcctcaagtgctgggattacaggtgtgagccactgtgcctggccTGGAATTTTTTTCTAAAATTTACATTTCTGAGTTAAGAATGCTTAAAATGTTATAAAAACAGAAGTACAATTCATTATGTGTTTCATTAATTACCTTTATTAAAAACAACacaattatattacaataggacaaaaaa--tgtttaagcaaatgaaaacgaaaccatgacatacccaaactcaggaggaggcaacaaaggcagtgctaaagggaagcttacagctccagatgcttaaattaaaaagaagaaagatctcaaaccca s panTro4.chr3 77147654 660 + 202329955 ----TATCTTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACATATAAATATGTCTGAAAtttt-ttctttcttc-tttttttttgagacggagtctcactctgtcactgaggctggagtgcagtggtgcaatctcagctcactgcaacctctgcctcccagattcaagtgattgtcctgcctcagcctccacagtagctgggattacaggcatccgccacgacacccagctaacttttat---ttttttttttctatttttagtaaagacagggtttcaccatgttggccaggctggtctccaactcctgacctcagatgatctgcccgcctaggcctcccaaagtgctgggattgcaggtgtgagccactgtgcctagccTGGAATTTTTTTCTAAAGTTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAACAGAAGCACAATTCATTATGTGTTTCATTAATCACCTTTATTAAAAACAACACAATTGTATTACAATAGGACaaaaaa--tgtttaagcaaatgaaaacaaaatcatgacatacccaaactcaggaggaggcaacaaaggcagtgctaaagggaaggttacagctgcagatgcttaaattaaaaagaagaaagatctcaaaccca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42318845 655 + 202140232 TCTTTATCTTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACATATAAATGTGTCTGAAATGtt-ttcttttttcttttttttttgagatggagtctca--ctgtcgcccaggctggagtgcagtagtgcaatctcagctcactgcaaactctgcctcccagattcaagtgattctcctgcctcagcctccagagtagctgggattacaggcacccgccaccacacccag----cttttat---atttttttttctatttttagtaaagacagggtttcaccatgttggccagactggtctccaactcctgacctcagatgatctgcctacctcagcctcccaaagtgctgggattacaggtgtgaaccactgtgcctggccTGGAATTTTTTTCTAAAGTTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAAGAGAAGCACGATCCATTATGTGTTTCATTAATCATCTTTATTAAAAACAATGCAATTATattacaataggacaaaaaa------taagcaaatgaaaacaaaaccatgacatacccaaactcagaaggaggcaacaaaggcagtgctaaagggaggcttacagctgcagatgcttaaattaaaaagaagaaagatctcaaaccca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77213 653 - 139590 ------TCTTTATGTCAGGTTGCTGTGTCAATACACTTAGGAGATCATAGTTTCTAAATTGAAATACATACAAATATGTCTGAAAtttt-ttcttttttc--ttatttttgagacagagtcttactctgccacccaggctggagtgcagtggtgcaatctcagctcactgcaacctcagcctcccagattcaagtgattctcctgcctcagcctccagagtagctgggattacaggagcccacaaccaaacccag----cttttat----attttttttctatttttaataaagacagggtttcaccatgttggccaggctgatctccaactcctgacctcagatgatatgcccgcctcggcctcctgaagtactgggattacaggtgtgagccacagtgcctggccTGGAATTTTTTTCTAAAGTTTACATTTCTGAGTTAAGAATGCTTAAAATATTATAAAAACAGAAGCACAATTCATTATGTGTTTCATTAATCACCTTTATTAAAAACAATGCAATTATattacaataggacaaaaaa-atgtttaagcaaatgaaaacaaaaccatgacatacccaaactcaggaggaggcaacaaaggcagtgctaaagggaagcttacagctgcagatacttaaattaaaaagaagaaagatctcaaacatg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346203 628 + 155834243 ------TCTTTATGTCAGGTTGCTGTGTCAATACACT-------------TTTCTAAATTGAAATACATATAAATATGTCTGAAAttttgttcttttttc---------tgagacaaagtctcactctgtcacccaggctggagtgcagtggtacaatctcagctcactgcaacctccgcctcccaggttcaattgattctcctgcctcaggctccagagtagctgggattacaggtacccaccaccacacccatataacttttgt-----atttttttgtatttttagtaaagacaggatt--------ttggtcaggctggtctcaaactcctgacctcaggtgatccacccatctcagcctcccaaagtgctgggattacaggtgtgagccactgctcctggcATGGAATATTTTTCTAAAGTTTACATTTCTGAGTTAAAAATGCTTAAAATATTATAAAAAACAAAGCACAATTCATTATGTGTTTCATTAATCACCTTTGTTAAAAACAATGCAATTATattacaggaagacaaaaaaaatgtttaagcaaatgaaaacaaaaccatgacatacccaaactcacagggaggcaacaaaagcagtgctaaagggaaacttacagctgtaggtgcttaaattaaaaagaagaacaatctcaaatc-- i calJac3.chr7 C 0 C 0 a score=11583.000000 s hg38.chrUn_GL000218v1 76010 124 + 161147 tgctaaagggaagcttacagctacagatccttaaattaaaaagaagaaagatctc---aaacccatgctaaagggaagc----------ttacagctgcagatgcttaaattaa----aaagaagaaagatctgaaaccCT s panTro4.chr3 77148314 62 + 202329955 tgctaaagggaagcttaca---------------------------------------------------------------------------gctgcagatgcttagattga----aaagaagagagatctcaaaccca i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77866 123 - 139590 tgctaaatggaagcttacagctgcagatgcttaaattaaaaagaagaaagatctc---aaacccatgctaaa-ggaagc----------ttacagctgcagatgcttaaattaa----aaagaagaaagatctcaaaccca i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346831 121 + 155834243 -------agcaatctaaca-----------ttaaacctgaagggaaaaaaactaatggcaaaccaagccaaa-ggaagaaaataatacgttagagcag-agatgagcagaataagaatagaaaaaaaaaaactgagtttct i calJac3.chr7 C 0 C 0 e ponAbe2.chr3 42319500 0 + 202140232 C a score=72952.000000 s hg38.chrUn_GL000218v1 76134 132 + 161147 -tgctaaagg----------------gaagcttatagctgcaggtgcttaaattaaaaagaagaaagatctcaaatcaataacctaacattacacctgaagggg--gggaaaaaaactaatgacaaaccaagcaaaaggaagaaaataaca s panTro4.chr3 77148376 129 + 202329955 -TGctaaagg----------------gaagcttatagctgcaggtgcttaaattaaaaagaagaaagatctcaaatcaataacctaacattacacctgaaggga-----aaaaaaactaatgacaaaccaagcaaaaggaagaaaataaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42319500 131 + 202140232 -tgctaaagg----------------gaagcttatagctgcaggtgcttaaattaaaaagaagaaagatctcaaatcaataatctaacattacacctgaaggga---aaaaaaaaactaatgacaaaccaagcaaaaggaagaaaataaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 77989 130 - 139590 -tgctaaagg----------------gaagtttatagctgcaggtgcttaaattaagaagaagaaagatctcaaatcaataacctaacattacacctgaaggga----aaaaaaaactaatgacaaaccaagcaaaaggaagaaaataaca i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35346952 126 + 155834243 tttttaaaagatcaataaaaaattttaaaactcatagc----------taaattaagaaaaaaaga---ttcaaata------ctaaaatcataaatgaaagaggtgacagtacaacagatgtcaca------gaaatgaagaaaattaca i calJac3.chr7 C 0 I 2303 a score=670472.000000 s hg38.chrUn_GL000218v1 76266 1404 + 161147 gattagagcagagataagcagaataagaccagaaaaaaggaa---------aaaaacactgagtttgtttttttaaagatcaataaaaattttaaaactcacagctatattaagaaaaaa-gagaaatctcaaatactaaaatcataagtaaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaaccatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacaaaccaccatactgcatcatggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccagtaatcaaaaaccccaccaaaaagaaaattccatgtccagataacttcactggaaaattttaccaaatatttcaagaagaattaatgccaatcctctgcaaaatattccaaaaatgttcaaaaaccagaaggggacattccaatccatt-tatcaggtcaacgtttatctggttccagagccagatgaacaccttttgtaataaaaacactcaaagaattagtaatatatggaaactcctcagtaaataaagattatacaggaaaagctcacagctaacatcatactcaatggtgaaagactaaaatcttttcctctaggatcaggaataagataacaacatctcttcctgccacttctattcatcacagtactggaatttctactcagaataattagtcaagagaaagtaataaaaaggatgcaaattggaaaggaaaaagtacaaaattttgttcacagacaacaggatgtaatgggtaaaaatcctgaaattcc-caaaatactggtaaaataatgaaattcaac-aaagtttcaggatacagtaacacacacaagtcagttgcatttccataaactaacaatgaacaatctgcaaataaaattttaaaaagagaggccaggtgcagtggctcacacttataatcccagcactttgggaggccaaggcgggtagaccacctgaggtcaggagttcgtgaccagctgggccaaacccatctctaaaataaatagtaaaactctgtctctattaaaaatacaaaaattcgctgggcgtagtggcagacaactgtagtcccagctacttgggaggctgaggcaggagaattgctt---gaacttggaaggtggaagttgcagtcagctgagattgtgccactgcgctccagcttaggaaactgagtgagacgccatctc-aaagaaaagaaagaaaggaaagaaagagagagaaa---------gaaaagaaaagaaaga----taaaacaaaagaaaagaaatttttaaaaagaatgac-----atttggctgggtgcagtggctcatgcctgcaatcccagcagttt-aggaggccgaggcaggcagatcacctga s panTro4.chr3 77148505 1428 + 202329955 gattagagcagagataagcagaataagaccagaaaaaagaaaggaaaaaaaaaaaacactgagttt----ttttaaagatcaataaaaattttaaaactcacagctatattaagaaaaaaagagaaatctcaaatactaaaatcatatataaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtcagcaaccatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacaaaccaccatactgcatcatggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccagtaatcaaaaaccccccaaaaaagaaaattccaggtccagataacttcactggagaattttaccaaacatttcaagacgaattaatgccaatcctctgcaaaatattccaaaaatgttcaaaaaccaggaggggacattccaatccattctatcaggtcaacatttatctggttccacagccagatgaacacctttcataataaaaacactcaaagaattagtaatagatggaaactcctcagtaaataaagatcatacatgaaaagctcacagctaacatcatactcaatggtgaaaaactaagaacttttcctctaggatcaggaacaagatagcaacatctcctcctctcacttctattcaccacagtactggaatttctactcagaataattaggcaagagaaagaaataaaaagcatgcgaattggaaaggaagaagtacaaaattttgttcacagacaacaggatgtaatgtgtaaaaatcctgaaattccacaaaatactggtagaataatgaaattcaac-aaagtttcaggatacagtaacacacacaagtcagttgcatttctataaaccaacaatgaacaatctacaaataaaattttaaaaacagaggccaggtgcagtggctcacgcttataatcccagcacttcgggaggccaaggcgggtggaccacctgaggtcaggagttcgtgaccagctgggccaaccccatctctaatgtaaatagtaaaactctgtctctgttaaaaatacaaaaattagctgggcatagtggcagacacctgtagtcccagctgcttgggaggctgaggcaggagaattgcttcttgaacttggaaggtggaggttgcagtcagctgagattgtgccactgcgctccagcctaggaaacagagtgagacgccgtctc-aaaaaaaagaaagaaaggaaagaaagagaaagaaaagaaaaaaagaaaagaaaagaaagaaaaagaaaacaaaagaaaagaaatttttaaaaagaatgac-----atttggccaggtgtggtggctcatgcctgcaatcccagcacttt-gggaggctgaggcgggcagatcacctga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42319631 1416 + 202140232 gattagagcagagataagcagaataagaccagaaaaaaaaaggaaaaa---gaaaacactgaggttgtttttttaaagatcaataaaaattttaaaactcacagctatatttagaaaa---gagaaatctcaaatactaaaatcataaataaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaaccatatgccacaaaactgcgcaacctaaaataaatttataaattcctagaaacacaaaccaccatactgcatcatggagaaataaaaaatccaaagagacctgtaactagtaagaagattcaaccagtaatc-aaaaccccccaaaaaagaaaattccaggtccacataacttcactggagaattttaccaaatatttcaagaagaattaatgccaatcctctgcaaaatattccaaaaatgttcaaaaaacaggaggggacattccaatccattctatcaggtcaacatttatctggttccagagccagatgaaCtcctttcataataaaaacactcaaagaattagtaatagatggaaactcctcagtaaataaagatcgtacatggaaagttcacagctaacatcacactcaatggtgaaaaactaaaagcttttcctctaggatcaggaacaagataccaaaatctcctcctgccacttctattcaccacagtactggaatttctactaagaataattaggcaagagaaataaataaaaagcatgcaaattggaaaggaagaagtacaaaattttgttcacagacaacaggatgtaatgtgtaaaaatcctgaaattccacaaaatactggtagaataatgaaattcaacaaaagtttcaggatacagtaacacacacaagtcagttgcatttctataaactaacaataaacaatctgcaaataaaattttaaaaagagaggccaggtgcggcggctcacgcttgtaatcccagcactttgggaggccaaggtgggtggatcaccagaggtcaggagttcatgaccagctgggccaatcccatctctaatataaatagtaaaactctgtctctattaaaaatacaaaaattagctgggcatactggcaaacacctgtagtcccagctacctgggagactgaggcaggagaattgctt---gaacttggaaggtggaggttgcagtcagctgagattgtgccactgtgctccagcctaggaaagagagtgagatgctgtctcaaaaaaaaaggaagaaaggaaagaaagagagagaaa---------gaaaataaaacaaagaaaaagaaaacaaaagaaaagaaatttttagaaagaattac-----atttggccaggcatggtggctcatgcctgcaatcccagcactttgggggggccaaggcgggcagatcacctga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 78119 1384 - 139590 gattagagcagagataagcagaataagaccagaaaaaaagga---------aaaaaaatacagtttgttttttaaaagagcaataaaaattttaaaactcacagctatattaaaaaaa---gagaaatctcaaatactaaaattataaataaaagaggtgacagtacaacagatgccacagaaatgaaaaagattacaagagactaatgtgagcaaccatatgccacaaaactgggcaacctagaataaatttataaattcctagaaacacgaaccaccatactgcatcatggagaaataaaaaatccaaagagacgtgtaactagtaagaagattcaaccagtaatcaaaaatcccccaaaaaagaaaattccaggtccagataacttcactggagaattttaccaaacaattcaagaagaattaatgccaatcctctacaaaatattccaaaaagattcaaaaaacaggaggggacattccaatccatcctatcaggtcaacatttatctggttccagagcctgatgaaCAActttcataataaaaacactcaaagaattagtaatagatggaagctcctcagtaaataatgatcatacatgaaaagctcacagctaacatcatactcaatggtgaaaaactaaaaacttttcctctaggatcaggaataaaatagcaacatttgctcctgccacttctattcaccacagtactggaatttctacatagaataattaggcaagagaaagaaataaaaagcatgcaaattggaaaggaacaagtacaaaattttgttcagagacaacaggatgtaatgtgtaaaaatcctgaaattccacaaaatactggtagaataatgaaattcaac-aaagtttcaggatacagtaacacacacaagtcagttgcatttctataaactaacaatgaacaatctgcaaataaaattTTAAAAAGAGAggccaggtgtggtggctcatgcttgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggaattcgtgaccagctgggccaaccccatctctaatataaatagtaaaactctgtctctattaaaaatacaaaaattagctgggcgtagtggcagacacttgtagtcccagctacttgggaggctgaggcaggagaattgctt---aaacgtggaaggtggaggttgcagtcagctgagattgtgccactgcactccagcctaggaaacagagtgagacaccatctt--aaaaaaagaaagaaTGGAAAGAAAggtcaacatg-------------------------------------aagaaacctcgtctctactaaaaatagcaaaaaaattagctgggcctggtggtgtgcacctgtgatcccagctactt-gagagattgaggttggagaatcgcttga i nomLeu3.chr21_GL397661_2_random C 0 I 1146 e calJac3.chr7 35347078 2303 + 155834243 I a score=11130.000000 s hg38.chrUn_GL000218v1 77670 44 + 161147 ggtcacaagttcaagacttgcctggtcaacatggagaaaccctg s panTro4.chr3 77149933 44 + 202329955 ggtcacaagttcaagactagtctggtcaatatggagaaaccctg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42321047 44 + 202140232 ggtcacaagttcaagactagcctggtcaacatagaaaaaccctg i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 79503 1146 - 139590 I e calJac3.chr7 35347078 2303 + 155834243 I a score=374498.000000 s hg38.chrUn_GL000218v1 77714 832 + 161147 tctctactaaaaataccaaaaaattagctgggtgtgctggcgcgcacctgtgatcccagctacttgagaggctgaggttggagaatcgcttgaataaagaaggtgcaggttgcagtgagctgagatagtgccactgcactccagcctgggagacagagcaagactccatctcaaaaaaaaaaaaaagtattacatttacaacagcattataaaaattaaaaataagcttaaccaaaagggcaaaagatttgaacacagaaaactacaaaacactgttgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagattagatgatttcatcttggaatgatgtcaacactactcgaagtgacctagattcaatacaatccttataaagattccaataacatttttgataaacagaaaaacctatcctaaaattcatatggaatctccagggcccatgaataggcaaatcaatcttgaagcagaacaaaattaaaggtctcaaaa-caattacaaaactgcaataagccaaaaaaaat--tgtggtcatggcataaagacatacttgacacacttatggaccaacacaacagagacctcagaaaccaaccctggcatatatggtctgatgatcttccacaaggatgccaagaccactcaatggcgaaggacagtttcttcaacaaatggtgttgggaaaattgtatatctacatgcaaaacaatgaagttggactcttaccttacaccatgttaaaattaattcaaagtgaattataaacctaattgtaaaactagaactatcaaactcctagggaaaacaaatttg s panTro4.chr3 77149977 832 + 202329955 tctctactaaaaataccaaaaaattagctgggcgtggtggcgtgcacctgtgatcccagctacttgagaggctgaggttggagaatcacttgaataaggaaggcggaggttgcagtgagctgagacagtgccactgcactccagcctgggagacagagcaagactccatctcaaaaaaaaaaaaaagaattacatttacaacagcattttaaaaattagaaacaagcttatccaagagggcaaaagatttgaacgccgaaaactacaaaacactgtcgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagattagatgatttcatcttggaatgatgtcaacactagtcgaagtgacctagattcaatacattccttataaagattccaatgacatttttgataaacagaaaaacccatcctaaaactcatatggaatctccagggcccatgaataggcaaatcaatcttgaaacagaacaaaattaaaggtatcaaaa-caattacaaaactgcaataagccaaaaaaaaaaatgtggtcatgacataaagacacac--gacaaacttatggaccaacacaacagatacctcataaaccaaacctggcatatagggtccaatgatcttccacaaggatgccaagaccactcaatggtgaaggacagtttcttcaacaaatggtgttgggaaaactgtatatccacatgcaaaacaatgaatttggactcttaccttacaccacgttaaaattaattcaaagtgaattataaacctaaatgtgaaactagaattatcaaactcctagggaaaacaaatttg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42321091 824 + 202140232 tctctactcaaaat-ccaaaaaattagctgggtgtggtggcgcacacctgtgattccagctacttgagaggctgaggttgaagaatcgcttgaataaggaaggcagaggttgcagtgagctaagatagtgccactgcactccagcctgggagacagagcaagactccatctcaaaaaaaagaaa------tacttttacaacagcattttaaaaattagaaataagcttaaccaagagggcaaaagatttgaacacagaaaactacaaaacactgttgaaagaaattaaacacaaataaatgaaaagaaaagctgggtttgcagatcagatgatttcatcttggaatgatgtcaacactactggaagtgacctagattcaatacaatccttataaagattccaatgactttttttataaacagaaaaacccatcctaaaattcatatggaatctccagggcccatgaataggcaaatcaatcttgaaacagaacaaaatt-aaggtctcaaaa-caattacaaaactgcaataagccaaaaaaaaa--tgtggtcatggcataaagacacacttgacacacttatggactaacacaacagagacctcagaaaccaaccctggcatatatggtccaatgatcttccacaaggatgccaaggccactcaatgttgaaggatagtttcttcaacaaatggtgctgggaaaattgtacatccacatgcaaaacaatgaagttggactcttaccttacaccatgttaaaattaattcaaagtgaattataaacctaaatgtaaaactagaactatcaaactcctagggaaaacaaatttt i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35349381 817 + 155834243 tctctcctaaaaattcaaaaaaattagccaggcatggtggcacctgcctgtgatcctagctacttgagaggctgagattggaggatcacttgaacctgggaggcagaggtttcagtaagccgagacagcgccactacactccagcctgggagacagagcaagactccatcgcaaaaaaaaaaaa---aaTTAcacttacaacagcattttaaaaattagaaataagctgaaccaagagagcaaaagatttgtacacaaaaaactacaaaatattgctgacataaattaaacactaacaaatggaaagaaaagctgggtttgtagattagattatttcatcttggaatgttgacaacactattcaaagtgacccagattcaatacaatccttataaagattccaataacattttcaaaaaacagaaaaacccatcctaaaatgcatatggcatctccagggcccatgaacaggcaaatcaatcttgaaacagaacaaagta-aaggtctcaaaaccaattacaaagctgc-ataacaaaaaaaaaatagtgtggcagcggcataaagacacac---------ttatggaccaacagaatagagatctc-taaatcaaccctggcatatatggtctgatgatcttccac-agggtgtccagaccactcaatggtgaaagacagtttcttcaacaaatggtgttgggaagactggatatccacatgcagagcaatgtagtcagactcttaccttataccgtgttaaaaccaactcacagttaattataaacctaaatgtaagagtagaac-ataaaactcctagggaaaaaaaattg- i calJac3.chr7 I 2303 C 0 e nomLeu3.chr21_GL397661_2_random 79503 1146 - 139590 I a score=1358963.000000 s hg38.chrUn_GL000218v1 78546 1742 + 161147 gaaaatgctttatgatgatgaatttgtcaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----atatatcaaacctaaaaacttctgtaccacaaaggtcacaaccaacagggtaaaaggcaaactgtagaataaaagaaaataccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggttgagcatctcgaattcaaacacctgagtctgcgatgctccaataagcatttcctttgagtgtcatgttggcactcaaaaagtttcagactttggagcatttgggatttcagatttttggatcagagacattcaacctatagttgcacatcatgtatctcataagaagtgaacattcagaatacgtaaagtactcctacaGAGAGACTACCAGAAGCAGAGAGGAGCAGACACATTTTCACACTAGGGCACCTCCTATCTCTCCCGGATTCCAATTACGGCAGAGTAAGTGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAATTAAGAAATAAAAAAATGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACCCCaaggaagaaagaaaaagaaacgaagaaaacagaaaAACAATTAAA-CCAGTTAATTAAACCTTGGCATGACCAGAAGATCAGAGTTTCCTAAAGGAGTGGAAATTTATTGATTTGAAGAGGATTTATTGATTACTGATTTGAAGAGGAAGAAAAACCATGAATGGTCTAAAGCAAAAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATATCCACAGATGGTGACAAGTTGGCAAAGCCTTTACTAGACTACTCGTGAGGCTAACTAGAGGCCAAGGAGCCGACACTGCCCC-GTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATACATGGAAGGACAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGAGCTCCAGCCCCAAGACTGTTCCATCCTCAATTGC-TTTGAGTGGGCAATGTAGGCTCTCCACACACGACCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCATGAAACACAAACCCTCCATGGTCAGGTCTG-TATTTGTTTCCTGCCTTTTTCCCAGCAATCCCCAGGCCCCAGCAGTGGTGGTCTACCTCTGCTGATTCTCATTCAGAATCTAAACTTAGAAACAATTATAACCTAGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGCAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGAGAGAT-AATGAATGATCATGACCCTGGCCCAA-GTAATGAGAATGAACTGTGAGATAAATGAATGATCATGa-caaaaaaccccgctacaacccaacaacaaaataaagtgatt-aaaaaatggacaaacaacatttatccaaagatgcaaagatgatatacaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactagtcattagagaaatgcaaaaagaaaccacaatgggacatcacttcaaacccaatagaaagtaacaagcgcaggtgaaactgaaacccttgaacactgttggtggaaatatgaactggctcctcaaaaaaaaataaaataaaatgaccatatga s panTro4.chr3 77150809 1745 + 202329955 gaaaatgctttacgacaatgaatttgtcaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----acgtagcaaacctaaaagtttctgtacctcaaaggtcacaaccaacagggtaaaaggcaaactgtagagtaaaagaaaataccagttgagcgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggctgagcatctcaaattcaaacacctgagtctgagatgctccaataagcatttcctttgagtgtcatgttggcattcaaaaagtttcagactttggagcatttgggatttcagatttttggatcagagacattcaacctatagctgcacatcatgcatctcataagaagtgaacatccagaatatgtaaagaactcCTACAGAGAGACTACCAGAAGTAGAGAGGAGCAAACACATTTTCACACTAGGGCACCTCCTATCTCTCCTGGATTCCAATTAGGGCAGAGTAAGTGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAA-TGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACACCTAGGAAGAAGGAAAAAGAAACCAAGAAAACAGAAAAACAATCAAA-CCAGTCAATTAAACCTTGGAGTGACCAGAAGATCAGAGTTTCCTAAAGGAGTGGAAATTTATTGATTTGAAGAGGATTTATTGATTACTGATTTGAAGAGGAAGAAAAACCATTAATGGTCTAAAGCAACAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGACCAGAATGTCCACAGATGGTGACGAGTTTGCAAAATCTTTACTAGACTACTCGTGAGGCTAACTAGAGGCCAAGGAGCCAACCCTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATACAGATGGAAGGACAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTGTCATTCCAAATAATGAGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGCTTTTGAGTGGCCAATGTGGGCTCTCCGCATACGAGCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCGTGAAACACAAACTCTCCATGGTCAGGTCCGTTATCTGTTTTCTGCCTTTTTCCCAGCAGTCCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAATCTAAACTTAGGGACAATTAGAACCTGGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCATGCAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGTGATAT-AATGAATGATCATGACCCTGGCCCAACGTAATGAGAATGGACTGTGAGATAAATGAATGATCATGACCaaaaaactccgctacaacccaacaacaaaataaagtgatt-aaaaagtggacaaagaacatttatccaaagatgcaaagatgatatacaaatagccaacagatatatgagatatatgagaagatgcgtaacatcactaatcattagagaaatgcaaatagaaaccacaatgggacatcacttcaaacccaacagaaagtaacaagtgcaggtgaaactgaaacccttgtacactgttggtggaaatatgaactggctcctc-aaaaaaaataaaataaaatgaccatatga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42321915 1691 + 202140232 gaaaatgctttatgacaatgaatttgtcaataatttttaggatatgacattaaaagctcaggcagtaaaagcaaaa----atagatcaaacctaaaagcttctgtacctcaaaggtcacaaccaacagagtaaaaggcaaa--gtagaataaaagaaaataccagttgagtgtcccttatttgaaatgcttgggatgtgtttcagattttgtaatatttgcattattcttactggttgagcatctcgaattcaaacacctgagtctgagatgctccaataagcatttcctttgagtgtcatgttggcactcaaaaaatttcagactttggagtatttgggatttcagatttttggatcagagacattcaacctatagttgcacatcatgtgtctcataagaagtgaacatccagaatacataaagaactcctacaGAGAGACTACCAGAAGCAGAGAGGAGCAAACATACTTTCGCACTAGGGTACCTCCTATCTCTCCTGGATTCCAATTAGGGCACAGTAAATGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCTGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAA-TGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACCCCTAGGAAGAAGGAAAAAGAAACCAAGAAACCAGAAAAACAATCAAA-CCAGGTAATTAAACCTTGGAGTGACCAGAAGATCAGAGTTTCCTAAAGGAGTGAAAATTTATTGATTTGAAGAGGATGTATTGATTATTGATTTGAAGAGGAAGAAAAACCATGAATAGTCTAAAGCAACAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATGTCCACAGATGGTGACAAGTTTGCAAAACCTTTATTAGACTACTCATGAGGCTAACTAGAGGCCAAGGGGCCAACCCTGCCCCTGTCCTTACAGAGAGACCCTACACAGGATTCCCAGATATAGATGGAAGGATAACATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGGGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGC-TTTGAGTGGCCAGCGTGGGCTCTCCACACACGAGCTACATGTAGGTTCCTTGGGTACCCAGATGGGAGCCATGAAACACAAACCCTCCATGGTCAGGTCCG-TATCTGTTTCCTGCCTTTTTCCCAGCAGTGCCCAGGCCTCAGCAGCAGTGGTCTACCTCTGCTGATTCTCATTCAGAACCTAAACTTAGAGACAATTAGAACCTGGACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTATACCCTGCAGCATGACTGTTT-----GCCCAACATAATGAGGATGAACTGTGAGAT-AATGAATGATCATGAC---------------------------------------------------Caaaaaaccctgctacaacccaacaacaaaataaagtgatt-aaaaagtggacaaagaacatttatccaaagatgcaaagatgatatacaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactaatcattagagaaacgcaaatagaaaccacaatgggacatcacttcaaacccaacagaaagtaatgagtgcaggtgaaactgaaacccttgtacactgttggtggaaatatgaactggctcctcaaaaaaaaataaaataaaatgaccatgtga i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 80649 1685 - 139590 gaaaatgcttgatgacaatgaatttgtcaataatttttaggatatgacattaaaagctcaagcagtaaaatcaaaa----atagttcaaacctaaaag---ctgtacctcaaaggtcacaacaaacagggtaaaaggcaaactatggaataaaagaaaataccagttgagtgtcccttatttgaaaggcttgggatgtgtttcagattttgtaatatttgcattattcttactggttgagcatcttgaattcatacacctgagtctgagatgctccaataagcatttcctttgagtatcatgtcggcactcaaaaaatttcagactttggagcatttgggatttcagatttttggatcagagacattcaacctatagttgcacatcatgtatctcataagaagtgaacatccagaatatgtaaagaactcctacaGAGAGACTACAAGAAGCAGAGAGGAGCAAACACATTTTCACACTAGGGCACCTCCTATCTCTCCTGGATTCCAATTAGGGCAGAGTAAGTGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGCAGCAGCAGTGAAAATAATCACAGAAGAAAACTAAGAAATAAAAAA-TGGAGAAAGTGAGACATCAAACTAAAATTACTAGAAACCCCTAGGAAGAAGGAAAAAGAAACCAAGAAACTAGAAAAGCAATCAAA-CCAGTTAATTAAACCTTGGAGTGACCAGAAGATCAGAGTTTCCTAAAGGAGTGGAAATTTATTGATTCGAAGAGGATTCATTGGTTATTGATTTGAAGAAGAAGAAAAACCATGAATGGTCTAAAGCAACAGCCTAGTGTCTGAAGAAGTCAGTAGGGTGAAAACAAGAGCTGGCCAGAATATCCACAGATGGTGACAAGTTTGCAAAACCTTTACTAGACTACTAGTGAGGCTAACTAGAGGCCACGGAGCCAACACTGACCCTGTCCTTACAGAGAGACCCTACACAGGATTTCCAGATATAGATGGAAGGACAATATCTTATCAGGTCCTCTCTGTGCAGATGTGGTTATCATTCCAAATAATGAGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGC-TTCGAGTGGCCAGTGTGGGCTCTCCACACACGAGCTACATAAAGGTTCCTTGGGTACCCAGATGGGAGCTGTGAAATACAAACCCTCCATGGTCGGGTTCG-TATCTGTTTCCTGCCTTTTTCCCAGCAGCCCCCAGGCCTCAGCAGCAGTGGTCCACCTCTGCTGATTATCATTCAGAACCTAAACTTAGAGATAATTAGAACCTGAACCCCAATTCTACCTGAAAGTAACAGAATAACATAATCTACACCCTGCAGCATGACTGTTT-----GCCCAACGTAATGAGGATGAACTGTGAGAT-AATGAATGATCATGAC---------------------------------------------------Caaaaaaccctgctacaacccaacaataaaataaagtgatt-aaaaaatggacaaagaacatttacccaaagatgcaaagatgatatacaaatagccaacagatacatgagatatatgagaagatgtgtaacatcactaatcattagagaaatgcaaatagaaaccacaatgggacatcacttcaaacccaacagaaagtaacaagcgcaggtgaaactgaaacctttgtacactgt---tggaaatatgaaccggctcctc--aaaaaaataaaataaaatgaccacatga i nomLeu3.chr21_GL397661_2_random I 1146 C 0 s calJac3.chr7 35350198 1671 + 155834243 gaaaatgttttacgacaataaatttttcaataaattttaggctatgacattaaaagctcaggcagtaaaaacaaaaatagatagatcaaacctaaaagcttctg-acctcaaaggtcacaatcaacacaataaaaggcaaactgtggaataaaaaaaaataccagttgagtgtcctttatttgaaatgcgtgggatgtgtttcagattttgtaatatttgcattattcttactgattgagcatcttgaattcaaa-acttgagtctaaaatgctccaataagcatttcctttgagtgtcatgttggcactcaaaatgtttcagactttggagtatttgggatttcagatttttagatatgagacactcaacctatagttgcacgtcacgtatctcataagaagtgtgcatccaggagacataaagaactcccacaGGGAGACCACCAGAAGCAGAAAGGAGCAAACACATCTTCACACCAGGGCACCTTCCATCTCTCCTGGATTCCAATTAGAGCAGAGTAAGTGCTAGTTCTCTGCCAACCCAGGATTAGGCCCTGTAGCTGCAGTGAAAATAATCACAGGAGAAAACTAAGAAATAAAAAA-TGTAGAAAGGGAGACATCAAACTAAAATTACTAGAAACCCCAAGGAAGAAGTAAAAAGAAAC--------CAGAAAAACAATCAAACCCAGTTAATTAAACCTTGGGGTGACCAGGAGATCAGAGTTTCCTAAAGGAGTGGAAATGTATTGATTTGAAGA---------------------GCTGAGGAAGAAAAATCATGAATGGTCTAAAGCAACAGCCGAGTGTCTGAAGAAGTCACTAGGGTGAAAAGAAGAGCTGGCCAGAACATTCACACATGGTGACAAGTTTGCAAAACCTTTACTAGACCACTCATGAGGCTAACTAG-GGCCAAGGAGCTAACCCTGGCCCTGTGCTTATAGAGAGACCCTACACAGAATTCCTAGACAGAGATGGAAGGACAACATCTTATCAGGTCCTATTTGTGCAGATGTGGTTATCTTTCCAAATAATGAGCTCCAGCCCCAAGCCTGTTCCATCCTCAATTGC-TCTGAGTGGCCAGTGTGGACTCCCCACATATGAGCTACATGTGGGTTCC-TGGGTACCCAAATGGGAGCCGTG-AACACAACCCCTCTATGGTCAGGTCTG-TATCTGTTTCCTGCCTTTTTCCCAGCAGCCCTGAGGCCTCAGCAGCAGCGGTTTACCTCTGCTAATTCTCATTCAGAACCTGAACTTAGAGGCCATTAGAACCTGGACCCCAATTCTACCTGAAAGTACCAGAATAACATAACCTATACAATGCTGCATGACTGTTTGCCTGGCCCAATGTAATGAGAATAAACTGTGAAATAAACAAACAATCATGACC--------------------------------------------------Caaaaacctctgtaacccaacaacaacaaaataaagtgattaaaaaaatggacaaagaacatttatccaaagacacaaagatgatatacaaatagccaacagatacatgagacatatgaaaagatgtataacatcactcatcattaaagaaatgcaaatagaaaccac-atgagatatcacttcatacccgacagaaaataacaagtgcaggtgaaagtgaaacccttgtgcactgttggtggaaatataaactggctcctcaaaaagaaatgacataaaattaccatatga i calJac3.chr7 C 0 I 2785 a score=67728.000000 s hg38.chrUn_GL000218v1 80288 182 + 161147 tccagccatccaactactac--agagacagaataactagtagcaggacctcaaacagatatgtgcacacctaagttcacagcagcattacacagccacaaggtggaagaaacaaaaacgtccatccaggaataggtggataaacaaaagcatatatatatatg---------------------------atatatat----------tatatatatatat-------- s panTro4.chr3 77152554 174 + 202329955 tccagccatccaacttctacagagagacagaataactagtagcaggacctcaaacagatatatgcacacctatgttcacagcagcattacacagccacaaggtggaagaaaccaaaacgtccatccaggaatggatggataaacaaaaggatatatatata-----------------------------------------------tatatgtatatgt-------- i panTro4.chr3 C 0 I 30 s ponAbe2.chr3 42323606 164 + 202140232 tccagcaatccaacttctacagagagacagaataactagtagcaggacctcaaacagatatatgcacacctatgttcacagcagcattacacagccataaggtggaagaaacaaaaacgtctatccaggaatggatggataaatgaaaggatatatatata-----------------------------------------------caa------------------ i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 82334 220 - 139590 tccagccatccagcttctacagagagacagaataactagtagcaggacttcagacagatatgtgcac---------cacggcagcattacccagccacaaggtggaagaaaccaaaacgactatctaggaatggatggataaacaaaaggatatatatatatatatatatacacacacacacacacacacatatatatacataatatatatgtgtatatatatatacat i nomLeu3.chr21_GL397661_2_random C 0 C 0 e calJac3.chr7 35351869 2785 + 155834243 I a score=2510.000000 s hg38.chrUn_GL000218v1 80470 61 + 161147 aatatata-----atatatata---------------------atatatata-atgtatgtatata-atatatatgtaatatatatata s nomLeu3.chr21_GL397661_2_random 82554 89 - 139590 aatatatatgtgtatatatatacatatatacatatatatgtgcatatatatacatatatgtgtatatatacatatataatatatgtata i nomLeu3.chr21_GL397661_2_random C 0 I 21 e calJac3.chr7 35351869 2785 + 155834243 I e ponAbe2.chr3 42323770 0 + 202140232 C e panTro4.chr3 77152728 30 + 202329955 I a score=334460.000000 s hg38.chrUn_GL000218v1 80531 673 + 161147 atatatatatgaagaaatattattcagccatagaaaggaagaaaatcgtgacacatctgacacataacatggaacctactt-acaaaacaacaaatattatataaccctaggtatataagccaaatttttagaaacacaaagtagaatagtacttgccagggggtggaaggagggggaaattaatagttgttgaatgggtatagagttttccaagataaaaaaaaaatctagaaatctgctacacaacaccgtaaatattcttaactctacaaaactgtatacttacaactagttacgacggtaaattttaaggtatgtgtttgttaccaaaattCTAAATAATAAATTATTTATaaaaaatgatcttttttgacacaaggtcttactctgttgccctggaaggagtgcaatggcatgatcacagctcattgcagcctcaacctcccaggctcaagcaacactcccacctcagcctcccaaatagttgggactacaggtgcacaccaagatgtcaggctaaattttggtttggtttttttgtagagagggttttgccatgatgcccaggctggtctcaacctcctgggctcaagcaatccacctcccttggcctccctcagagctgagattatgagcataagccaccatgcccagcctataaaaaaatatttca s panTro4.chr3 77152758 671 + 202329955 atgtacacacaaagaaatgttattcagccatagaaaggaagaaaatcctgacacatctgacacataacatgaaacctacttaacaaaacaacaaatattatataaccccaggtatataagccaaatttttagaaacacaaagtagaatagtacttgccaggaggtggaaggagggggaaattaatagttgttgaatgggtatagagctttccaagat-taaaaaaaatctagaaatctgctacacaacactgtaaatattcttaactctacaaaactgtatacttacaactggttatgatggtaaattttaacgtatgtgtttgtcaccaaaattcgaaaTAATAAATTATTTATaaaaaatgatcttttttgacacagggtcttactctgttgccctggcaggagtgcaatggcatgatcacagctcactgcagcctcgacctcccaggctcaagcaaccctcccacctcagcctcccgaatagttgggactacaggtgcacaccacgatgtcaggctaatttttggtttggtttttttgtagacagggttttgccatgttg--caggctggtctccacctcctgggctcaagcaatccacctcccttggcttcccacagagctgagattatgagcatgagccaccatgcccagcctataaaaaattatttga i panTro4.chr3 I 30 C 0 s ponAbe2.chr3 42323770 658 + 202140232 ------------agaaatattattcagccatagaaaggaagaaaatcctgacacatctgacacacaacatggaacctactt-acaaaacgacaaatattatataactccaggtatataagtcaaatttttagaaacacaaagtagaatagtacttgccaggaggtgaaagga-ggggaaattaatagttgttgaatgcgtatagagttttccaagattaaaaaaaaatc--gatatctgctacacaacactgtcaatattcttaactctacaaaactgtatacttacaactggttatgacggtaaattttaaggtacgtgtttgtcaccaaaatttgaaaTAGTAAATTATTTATAAAAAATGAttttttttgacacagggtcttactctgttgccctggcaggagtgcaatggcatgatcacagctcactgcagcctcaacctcccaggctcaagcaaccctcccacctcagcctcccgaatagttgtgactacagatgcacaccacgatgtcaggctaatttttggtttggtttttttgtagacagggttttgccatgttgcccaggctgatctcaacctcctgggctcaaccaatccacctgccttggcctcccacagagctgagattacaagcatgagccaccatgctcagccTATAAAAAATTATTTCA i ponAbe2.chr3 C 0 I 296 s nomLeu3.chr21_GL397661_2_random 82664 670 - 139590 atatatatactaagaaatattattcagccatagaaagaaagaaaatcctgacgcatctgacacataacatggaacctactt-acaaaacgacaaatattatataaccccaggtatataagtgaaatttttagaaacacaaagtagaatagtacttgccaggaggtggaaggagggggaaattaatagttgttcaatgggtatagagtcttccaagat--aaaaaaaatctagaaatctgctacacaacactgtaaatattcttaactctacaaaactgtatacttacaactggttatgacggtaaattttaaggtatgtgtttgtcaccaaaattcgaaaTAATAAATTATTT-Taaaaaatgatcttttttgacgcagggtcttactctgttgtcctggcaggagtgcaatggcatgatcacagctcactgcagcctcaacctcccaggctcaagcaaccctcccacctcaacctcctgaatagttgggactacaggtgcacaccacgatgtcaggctaattcttggtttggattttttgtaggcagggttttgccatgttgcccaggctggtctcaacctcctgggctcaagcaatccacctcccttggcctcccacagagctgagattatgagcatgagccaccatgcccagcctataaaaaattatttca i nomLeu3.chr21_GL397661_2_random I 21 C 0 e calJac3.chr7 35351869 2785 + 155834243 I a score=9826.000000 s hg38.chrUn_GL000218v1 81204 41 + 161147 aaaagccaaaatattaatcaaactggagtatttagaaatat s panTro4.chr3 77153429 41 + 202329955 aaaagccaaaagattaaccgaactggaatatttacaaatat i panTro4.chr3 C 0 I 4 s nomLeu3.chr21_GL397661_2_random 83334 41 - 139590 aaaagccaaaagattaatcaaactggaatatttagaaatat i nomLeu3.chr21_GL397661_2_random C 0 I 4 e calJac3.chr7 35351869 2785 + 155834243 I e ponAbe2.chr3 42324428 296 + 202140232 I a score=1034232.000000 s hg38.chrUn_GL000218v1 81245 2150 + 161147 ttaacccaaaagaagttaggaaagaatatatagaagatcaaaacacagacgaaggccagacatggttgctcat-gcctgtaatccgaacactttgggaggccaaggtgggtagattgcttgagctcaggagttcaagaccagcctgtgcaacatggcaaaaccctatctctacaaaaaatataaaaattagccaggtgtgtttccatgcgcctgtagtcccagctactcagtgggctccagtgaggattggttgggcctgggaagcagaggttgaagtaagccaacattgcaccattgcactacagtctcggtgacagagcaagaccctgtctt----aaaaaaaaaaaacaaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttagcaatgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaagcaagacccaacaatatggcatccacagagacacaatttaaatacaaagac----acaaagtatgagaaaaaatatgctatgcagacactaatcataaaaatatgctatccagacactaatcataaaaagcttcaatggagatgttaacactagatgaaagaggctccagaaaaaaaatatatcaccagaaataaacaaggtaatttcataaaaataaaagaatcagagaggatgatgttacaattataaattgtgcctcaaattgcacacaaagtacacacacacacagagcctcaaattatgtaaatcaaaaacaacagaacaaaagcaggaaattgacaatccaaaattataactggtgaattaatactgctctctcagtaactgatggaacaaccagat-aaaaatataggaaaaatacggatctaaatgacaaaatcctgacccaaatggtactt----------------ggcagtaccaagatagac----tgtcgatcaattgagaaaatgttcaagcatgaaatagtatacaaagtatgttgtctgaacacctgaaattaaattagaaaccaacaacaaattgatatccagaaaagcctcaaatgtctgaaaaccaagtaataaactttgaaataccctgtaagtc----aaaaaagtattcacaaggggaactggaatgtatttggaacaaacttgttataaaaatcatatTTCtggtagactaaaggtgacaacatctttcctgc---tcctctctctgtgagaaccaattccccttaaaccttgcccagactactgacttgcttggccaacagaaggtgacaaaggtggtatttggggacttcagaagccaggCTGAGAAAACAGAACACTTATCCAGGAGAAAGCCAGTCACCAGGCAGGAAATCCCACTCCCCTGAGA-CCCCATGATGGAAACCACACGGCCAGTCCATGACTAGCTACATGCATTGACATCCCCCATTGACCCTCTAGCAACACCGACTCCCAACCACTAGTGAGCCTTCAGCAACATCCCCTCCCAACCACTAGTGAGCCACCCTGCACACCACCCCGCTGTGCTTTCACACAATCcagcttg-----------gctgcaactgtgtgtgagatgagctggccaccaagactctctaagccaaaaaac--aagtaataatgagttgttttaagctgcc-aagttttggggatggtttcttcagaatagataactggaacaGAATATTgtagctggaaatgagccgctgtggtaatcagaagctacaatatgtgccacgactgtgaggctgacctgtaactgggcctcaaggaga-----acattcatgcaacctggaagggcaacaagactcttggtcagggcctgaaagacggtgagaaaatgtcattggaaactggggaaaaggcctgagagttatgtgctgagggactgtgagaaaactatggccacaacatggaaactgaaagggcactgcaccatctcagggatctgcctaaggagacatctgggaagaacatggaaagtgctatcagcctcccctaactgtcactgaataaacatgacaggagagggacatgatctaaagaaggaagttcagttttcaaacaaaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGGCCaaag---aaaaaaaaaagaaa-------------aaaaaaaaTTATAAAGAAGCCATTGAATACCCTATTG s panTro4.chr3 77153474 2163 + 202329955 ttaacccaaaagaagttaggaaagaatatatagaagatcaaaagacagacgaaggccaggcatggtggctcat-gcctgtaatcccaacactttgggaggccaaggtgggtagattgtttgagctcaggagttcaagaccagcctgtgcaaaatggcaaaaccctatctctacaaaaaatataaaaattagcc-ggtgtggtgccatgcacctgtagtcccagctactcagggggctgaagtgaggattggttgggcctgggaggcagaggttgcagtgagccaagactgcaccattgcactacagtctgggtcacagagcaagaccctgtcgtaaaaaaaaaaaaaaaacaaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttagtaatgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaagcaagacccaacaatatggcatccacagagacacaatttaaacacaaagacacaaacaaactatgagaaaaaatatgctatgcagacactaatcataaaaagatggtatccagacactaatcataaaaagctccaatggagatgttaacactagatgaaagaagcttcag-aacaaaatatatcaccagaaataaacagggtactttcataaaaataaaagaatcagagaggatgatattaaaattataaattatgcctcaaagtgcacatgaagtacacacacacacagagcctcaaagtacgtgaatcaaaaacaacagaacaaaagcaggaaactgacaatccacaattatagctggtgaattaatactgctctctcagtaactgacggaacaaccaaataaaaaaaataggaaaaatacagatctaaatgacaaaatcctgacccaaatggtatttatgaagcacacagttgagcactaccaggacagactgtatgtccatctattgagaaaaggttcaagcctgaaatagtatacgaagtatgttgtctcaacgcttgaaattaaattagaaaccaacaacaaatagatatccagaaaagcctcaaatgtctgaaaaccaagtaataaactttgaaacaccctgtgagtc---aaaaaaagtattcacaaggggaactggaatgtatttggaacaaacttgttataaaaatCACATTTCtggtagactaaaggtgacaacttctttcctgc---tcctctctctgtgagaaccaattccccttga--------cagtctactgacttatttggccaacagaaggtgacaaaggtggtatttggggacttcagaagccaggCTGAGAGAACGGAACACTTATCCAGGAGAAAGCCAGTCACCAGGCAGGAAATCCCACTTCCCTGAGACCCCCATGATGGAAACCATACGGCCAGTCCACGACTAGCTACACTCATTGACAGCCCCC----------------------------------AGTAAGCCTCCAGCAACACCCACTCCCAACAACTAGTGAGCCACCCTGCACGCCACACTGCTGTGCTTTCACACAATCCAGCTCGGCTGCTGCCCTGCTGCAACTATGTGTGAGATGTGCTGGCCAACAAGACTCTCTAAGCCAAaaaac--aagtaataatgagttgttttaagctgccaaagttttggggatggtttcttcagaatagataactggaacaGAACAtggcagctggaaatgagccgctgtggtaatcagaagctacaacatgtgccacgactgtgaggctgagctgtaactgggcctcaaggaga-----ccattcatgcaagctggaagggcatcaagactcttggcgagggcctgaaggacagtgagaaaatgtcattggaaactggagaaaaggcctgggagttacgtgctgagggactgtgggaaaactacagccacaacatggaaactgaaagggcactgtaccatctcagggatctgcctaaggagacatctgagaagaacgtggaaagtgctaccagcctcccctaactgtcactgaataaatatgacaggagagggacatgatctaaagaatgaggttcagttttcagacagaatttagagaaaatataaagaaATAATTTATTGTCTCAAAAGGCCAAAGT--AaaaaaaaaaggaaagaaaagaaaaggaaaaaaaatgaaaaAGAAGCCACTGAATACTCTATTG i panTro4.chr3 I 4 C 0 s ponAbe2.chr3 42324724 2187 + 202140232 ttaacccaaaagaagttgggaaagaatatatagaagatcaaaagaca----aaggccaggcatggtggctcac-acctgtaatcccaacactttgggaggccaaggtgggtagattgcttgagctcaggagttcaagaccagcctctgcaacatggcaaaaccctatctctacaaaaaatataaaaattagccaggtgtggtgccatgcacctgtagtcccagctactcagggggctgaagtgaggattggttgggcctgggaggcagaggttgcagtgagccaagattgcaccattgcactacagtctgggtgacagagcaagaccctgtctt----aaaaaagaaaattaaacaaacagaaaataagtagaaaaatggcagacctaaatccaaccttagtaatgattagttacaatgtaactggacaaatactctacttaagacagagactgccagacctgagaggaaagcaagacccaacaatatggcatccacagagacacaatttaaacacaaagac----acaaagtatgagaaaaaatatgctatgcagacactaatcataaaaatatgctatccagacactaatcacaaaaagcatcaacggagatgttaacactagatgaaagaggcttcag-aacaaaatatatcaccagaaataaaca-ggtactttcataaatataaaagaatcagagaggatgatattacagttataaattgtgcctcaaagtgctcataaagtacacacacacacagagcctcaaagtacgtgaatcaaaaacaacagaacaaaagcaggaaattgacaatccacaattatagctggtgaattaatactgctctctcagtaactgatggaacaaccagat-aaaaaaataggaaaaatacggatctaaatgacaaaatcctgacccaaatggtatttatgaagcacacagttgagcactaccaagacagactgtatgtccatctattgagaaaaggttcaagcctgaaatagtataaaagata-gttgtctgaacacttgacattaaattagaaaccaacaacaaatagatatccagaaaaggctcaaatgtctgaaaaccaaataataaactttgaaataccctgtgagtcaaaaaaaaaagtattcacaaggggaactggaacatatttggaACAAACTTGTTATAAAAATCACATTTCtggtagactaaatgtgacaacttctttcctgc---tcctctctctgtcagaaccaattccccttgaaccttgcctagactactgacttatttggccaacagaaggtgacaaaggtggtatttggggacttcagaagccaggctgagagaacggaacacttatccaggagaaagccagtcaccaggcaggaaatccccctcccctggga-ccccatgatggaaaccacacggccagtccatgactagctacacacattgacagcccccactgagcctccagcaacacc--ctccaaaccactagtgagcctccagcaacgcccgctcccaaccactagtgagccaccctgcacaccaccccgctgtgctttcacacaatccagctcagctgctgccctgctgcaactgtgtgtgagacaagctggccaccaagactctctaagccaaaaaacaaaagtaataatgagttgctttaagctgcc-aagttttggggatggtttcttcaaaatagataactggaacaGAATACGGCAGCTGGAAATGAGCCGCTGTGGT-ATCAGAAGCTACAACATGTGCCACGACTGTGAGGCTGAGCTGTAACTGGGCCTCAAGGAGACCATTCCATTCACGCaagctggaagggcatcaagactcttggtgagggcctgaaggacagtgagaaaatgtcattggaaactggagaaaaggcctgggaattacgtgcggagggactgtgggaaaactacagccacagcatggaaactgaaagggcactgcatcatctcagggatctgcctaaggagacatctgggaagaatgtggaaagtgctaccagcctcccctaactgtcactgaataaatatgacaggagagggacatgatctaaagaaggaggttcagttttcaaacagaatttagagaaaatataaagaaATAATTTCTTGTCTCAAAAGATCAAAGTCAAAAAAAAAAAGAAAAG-----------GAAAaaaatgaaaaagaagccattgaataccccattg i ponAbe2.chr3 I 296 C 0 s nomLeu3.chr21_GL397661_2_random 83379 2156 - 139590 ttaacccaaaagaagttagg-aagaatatatagaggatcaaaagacagat-gaggccaggc-ttgtggctcatctcctgtaatctctacactttggaaggccaaggtgggtagattgcctgagctcaggagttcaagacgagcccgtgcaaaattgcaaaaccctatctctacaaaaaatataaaaattagccatgtgtggtgccatgcacctgtagtcccagctactcagggggctgaagtgaggattgattgggcctggggggcagaggttgcagtgagccaagattgcaccattgcactacagtctgggtgacagagcaagaccctgtctt--taaaaaaaataaaataaacaaatagaaaataagtagaaaaatggcagacctaaatccaaccttaataatgattagttacattgtaactggacaaatactctacttaagacagagactgccaaacctgagaggaaagcaaggcccaaaaatatggcaaccacagagacacaatttaaacacaaagacacaaacaaagtatgagaaaaaatatgctatgcagacactaatcgtaaaaatatgcaatccagacactaatcacaaaaagcttcaatggagatgttaacactaggtgaaagaggcttcag-aacaaaatatatcaccagaaataaacaggggactttcacaaaaataaaagaatcagagaggacaatattacaattataaattgtgcctcaaaatgcacacaaagt--acacacacacagagcctcaaagtacgtgagtcaaaaacaacagaacaaaagcaggaaattgacaatccacaattatagctggtgaattaacactgctcactcactaactgacggaacaaccaaat-aaaaaaataggaaaaatacagaactaaatgacaaaatcatgacccaaattgtatttatgaagcacgcagttcagcactatcaagacaaactgtatgttgatctactgagaaaaggttcaagcctgaaatagtatacaaagtatgttgtctgaacccctgaaattaaattagaaaccaacaacaaatagatatccagaaaaccctcaaatgtctgaaaaccaagtaataaactttgaaataccctgtgagtc---aacaaaagtattcacaaggggaactggaatgtatttggaACAAACTTGTTATAAAAATCACATTTCtggtagactaaaggtgacaatttctttcctgctcttcttctctctgtgagaaccaattcgccttgaaccttgcccagactactgacttatttggccaacagaaggtgacaaaggtggtatttgggaacttcagaagccaggctgagagaacggaacacttatccaggagaaagccagtcaccaggcaggaaatcccactcccctgagaccctcattatggaaaccacatggccagtccacgactagctacacgcattgacagccccc----------------------------------actaagcctccagcaacacccattcccaaccactagtgagccaccctgcacaccaccccgctgtgctttcacacaatccagctcggctgctgacctgctgcaactgtgtgtgagatgagctggccaacaagactctctaagccaaaaagc--aagtaataatgagttgttttaagctgcc-aattttgggggatggtttcttcagaatagataactggaacaCAATACAGCAGctggaaatgagccgctgtggtaatcagaagctacaacatgtgccacgactgtgaggctgagctgtaactgagcctcaaggaga-----ccattcatgcaagctggaacagcatcaagtctcttggtgagggcccgaaggacggtgagaaaatgtcattggaaactggagaaaaggcctgggagttacgtgctgagggactgtgggaaaactacggccacaacatggaacctgaaagggcactgcaccatctcagggatctgcctaaggagacatctgggaagaacctggaaagtgctaccggcttccc----ctgtcactgaataaatatgacaggagagagacatgatctaaagaaggaggttcagttttcaaacagaatttagagaaaatataaaTAAATAATTTCTTGTCTCAAAAGGCCaaagtaaaaaaaaaaaaaaaaggaaaagaaaa--gaaaaaaatgataatgaaGCC-------ACCCTATTG i nomLeu3.chr21_GL397661_2_random I 4 C 0 e calJac3.chr7 35351869 2785 + 155834243 I a score=68996.000000 s hg38.chrUn_GL000218v1 83395 104 + 161147 ACCATAAGAAAA-AGGCAGAGAAAGTTGGTCAACGGCAACCCAGGCA-----CTGAAGGAAAAAGAACAT------GGAGAATGACAAAAGCCCAGAGGGAGGAGTAAAAGGACAC s panTro4.chr3 77155637 104 + 202329955 ACCATAAGAAAA-AGGCAGAGAAAGTTGGTCAATGGCAACCCAGGCA-----CTGAAGGAAAAAGAACAT------GGAGAATGACAAAAACCCAGAGGGAGGAGTAAAAAGGCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42326911 104 + 202140232 accataagaaaa-aggcagagaaagttggtcaacggcaacccaggca-----ctgaaggaaaaagaacat------ggagaatgacaaaagcccagagggaggagtaaaaaggcac i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85535 104 - 139590 ACCATAAGAAAA-AGGCAGAGAAAGTTGGTCAACAGCAAACGAGGCA-----CTGAAGGAAAAAGAACAC------GGAAAATGACAAAAGCCCAGAGGGAGGAGTAAAAAGACAC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s micMur1.scaffold_35832 8 116 + 9510 ATCAGAAGAAAACAAGTGGAGAATGTTGGTCAACTGGAAGCTTGGTAATTTTTTTAATGAAAGAGAACATCCACTCAGAGAATGGTGAGAGCTCAAAGGGCAGAATGAAGTGGCAT i micMur1.scaffold_35832 N 0 I 5 e calJac3.chr7 35351869 2785 + 155834243 I a score=755.000000 s hg38.chrUn_GL000218v1 83499 1 + 161147 A s panTro4.chr3 77155741 1 + 202329955 A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327015 1 + 202140232 a i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85639 1 - 139590 A i nomLeu3.chr21_GL397661_2_random C 0 C 0 s tarSyr2.KE941085v1 860101 1 - 1133132 G i tarSyr2.KE941085v1 N 0 I 74 s micMur1.scaffold_35832 129 1 + 9510 A i micMur1.scaffold_35832 I 5 C 0 e calJac3.chr7 35351869 2785 + 155834243 I a score=57364.000000 s hg38.chrUn_GL000218v1 83500 102 + 161147 AACGCCGTTCTCAGGGACAAGGACTGGGCGCCGTTCTCAGGGACCTGGACTGGGCACTAATCACAGAACTGTAACAGGCGCCCCATGGTAATGACCAACTGT- s panTro4.chr3 77155742 102 + 202329955 AACGCCATTCTCAGGGACCAGGACCCAGCGTCGTTCTCAGGGACCAGGACTGGGCACTAATCAGAGACCTGCGACAGGTGCCCCATGGGAATGACCAACCGT- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327016 102 + 202140232 aacaccgttctcagggaccaggactggacatcattctcagggaccaggactgggcactaatcagagaacTGCAACAGGTGCCCCATGGGAATGACCAACTGT- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85640 102 - 139590 AACGCCATTCTCAGGGACAAAGACTGGGCGCCGTTCTCAGGGAGCAGGACTGGGCACTAATCAGAGAACTGCAACAGGCGCCCCATGGGAATGACCAACTGT- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s micMur1.scaffold_35832 130 73 + 9510 AACG------------------------------TCCAGGGGACCAGGACTGGGCAGTAATCAAAGAATGGAAGCACGTGCCCAAGGGGAGTAGCCAACTGCT i micMur1.scaffold_35832 C 0 C 0 e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860102 74 - 1133132 I a score=755.000000 s hg38.chrUn_GL000218v1 83602 1 + 161147 T s panTro4.chr3 77155844 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327118 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85742 1 - 139590 T i nomLeu3.chr21_GL397661_2_random C 0 C 0 s tarSyr2.KE941085v1 860176 1 - 1133132 C i tarSyr2.KE941085v1 I 74 I 2949 s micMur1.scaffold_35832 203 1 + 9510 T i micMur1.scaffold_35832 C 0 C 0 e calJac3.chr7 35351869 2785 + 155834243 I a score=47957.000000 s hg38.chrUn_GL000218v1 83603 92 + 161147 AGA-CGGGGCCTGCAGGGCAGCACCTCCCTCCTGCCTCCCACCAACAGCTTCTACAGGGAAATGCCGACTGTTTTCACACCAGTCCCCTCACT s panTro4.chr3 77155845 92 + 202329955 AGA-CGGGGCCTGCAGGGCAGCACCTACCTCCTGCCTCCCACCAACCCCATCTAAAGAGAAATGCCGACTGTTTTCACACCAGTCCCCTCACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327119 92 + 202140232 AGA-CGGTGCCTGCAGGGCAGCACCTACCTCCTGCCTCCCCCCAACCCCGTCTAAAGAGAAATGCCGACTGTTTTCACACCAGTCCCCACACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85743 79 - 139590 AGA-CAGGGCCTGCAGGGCAGCACCTACCTCCTGCCTCCCACTAACCCCATCTGAAGGGAAATGCCG-------------CAGTCCCCTCACT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s micMur1.scaffold_35832 204 83 + 9510 AGACCCATGCCTGCAGGG-------TGCCTCCGACCTCCCACCTTCCCTGTCT--AGGGCAGTGCTGGC-GAGTGCATGACAGTCCCCTCACA i micMur1.scaffold_35832 C 0 I 6 e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I a score=2358.000000 s hg38.chrUn_GL000218v1 83695 5 + 161147 GCGGC s panTro4.chr3 77155937 5 + 202329955 GAGGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327211 5 + 202140232 GCGGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85822 5 - 139590 GCGGC i nomLeu3.chr21_GL397661_2_random C 0 C 0 e micMur1.scaffold_35832 287 6 + 9510 I e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I a score=4949.000000 s hg38.chrUn_GL000218v1 83700 18 + 161147 TGAGTGTGTGGGCACAGA s panTro4.chr3 77155942 18 + 202329955 TGAGTGTGTGGGCGCAGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85827 18 - 139590 TGAGTGTGTGGGCGCAGA i nomLeu3.chr21_GL397661_2_random C 0 C 0 e micMur1.scaffold_35832 287 6 + 9510 I e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=3668.000000 s hg38.chrUn_GL000218v1 83718 48 + 161147 TGATAGGTCACAACAACCTTATTCAGTCCTCACTGTGGCTGAGTGCGT s panTro4.chr3 77155960 48 + 202329955 TGACAGGCCACCACAGCCTGATTCAGTCCTCACTGTGGCTGAGTGTGT i panTro4.chr3 C 0 C 0 e micMur1.scaffold_35832 287 6 + 9510 I e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=300.000000 s hg38.chrUn_GL000218v1 83766 1 + 161147 C s panTro4.chr3 77156008 1 + 202329955 C i panTro4.chr3 C 0 I 1 s gorGor3.chr3 77733329 1 + 199944510 C i gorGor3.chr3 N 0 N 0 e micMur1.scaffold_35832 287 6 + 9510 I e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=249.000000 s hg38.chrUn_GL000218v1 83767 5 + 161147 AGGGG- s panTro4.chr3 77156010 5 + 202329955 GGGGG- i panTro4.chr3 I 1 C 0 s panPan1.JH650567 934 5 + 44305 -ggggT i panPan1.JH650567 N 0 I 34608 e micMur1.scaffold_35832 287 6 + 9510 I e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=3485.000000 s hg38.chrUn_GL000218v1 83772 39 + 161147 CAGACAACAGGCCACCACAACCTGATTCAGTCCTCACTG s panTro4.chr3 77156015 39 + 202329955 CAGATGACAGGCCACCACAACCTGATTCAGTCCTCACTG i panTro4.chr3 C 0 C 0 e micMur1.scaffold_35832 287 6 + 9510 I e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=329.000000 s hg38.chrUn_GL000218v1 83811 2 + 161147 TG s panTro4.chr3 77156054 2 + 202329955 CG i panTro4.chr3 C 0 I 467 s micMur1.scaffold_35832 293 2 + 9510 TG i micMur1.scaffold_35832 I 6 C 0 e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=461.000000 s hg38.chrUn_GL000218v1 83813 4 + 161147 GCTG s panTro4.chr3 77156523 4 + 202329955 GCTG i panTro4.chr3 I 467 I 2 s micMur1.scaffold_35832 295 4 + 9510 GGTA i micMur1.scaffold_35832 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42327216 0 + 202140232 C a score=14977.000000 s hg38.chrUn_GL000218v1 83817 42 + 161147 TGTGTGGGGGGGCAGATGACAGGCCACCACAACTTGATTCAG s panTro4.chr3 77156529 42 + 202329955 TGTGTGGGGGGACAGATGACAGGCCGCCACAACCTGATTCAG i panTro4.chr3 I 2 C 0 s ponAbe2.chr3 42327216 42 + 202140232 TGTGTGGGAGTGCAGATGACAAGCCAGCACAACCTGATTCAG i ponAbe2.chr3 C 0 C 0 s micMur1.scaffold_35832 299 37 + 9510 TGTGTGGAGGGGCAGGTGACAGCCCACCAGGACTCGA----- i micMur1.scaffold_35832 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e calJac3.chr7 35351869 2785 + 155834243 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=4322.000000 s hg38.chrUn_GL000218v1 83859 33 + 161147 TCCTCACTGCG-GCTGAGTGTGTGTG--GGTGCAGG s panTro4.chr3 77156571 31 + 202329955 TCCTCACTGCG-GCTGAGTGTGTG----GGTGAAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327258 33 + 202140232 TTCTCACTGCG-GCTGAGTGTGTCGG--GGGGCAGA i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35354654 36 + 155834243 tcctcactgtgcactgggtgtgtgtggaggggcaga i calJac3.chr7 I 2785 C 0 s micMur1.scaffold_35832 336 4 + 9510 ----------------AGTG---------------- i micMur1.scaffold_35832 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 85845 0 - 139590 C e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=345871.000000 s hg38.chrUn_GL000218v1 83892 365 + 161147 TGACAGGCCACCACAa------cctgattcaggattcagttgggctaccagccagtgccataaggaaaaccactctgggactcttgagaggggcaaagcataatttgcatgtgggagaaacgttagtagtttgtggccagaggacaaactgtggtttattaaagactgctgcaggttcctacta-tgcttctcatcaagaggtggaatctaatcaccttccccccttgaatcatggctggtctcagtgatgagtacgactgg-acagtgtggcaggagagatgttctgggacttctgagggatgatcatgagagaccttacagcttctgcctgggcctcttggacacatacactgggagaagccagacaaacc s panTro4.chr3 77156602 368 + 202329955 TGACAGGCCACCACAATCACAacctgattcaggattcagttgggct-ccagccagtgccataaggaaaaccattctggggctcttgagaggggcaaagcataatttgcatgtgggagaaatgttaatagtttgtggccagaggacaagctgtggtttatta--gactgctgcaggttcctacta-tgcttctcatcaaaagggggaatctaatccccttccccacttgaatcgtggctggtctcagtgatgagtatgactgg-acagtgtgacaggagagatgctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacgccctgggagaagccagacaaacc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327291 365 + 202140232 TGACAGGCCACCACAa------cctgattcaggattcagttgggcttccagtcagtgccataaggaaaaccattctggggctcttgagaggggcaaagcatattttgcatgtgggagaaatgttagtagtttgtggccagaggacaagctgcggtttattaaagactgctgcagattcctacta-tgcttctcatcaagaggtggaatctaatcatcttccccccttgaatcgtggctggtctcaatgatgagtacgactgg-acagtgtggtaggagagatgctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacaccctgggagaagccagacaaacc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 85845 365 - 139590 TGACAGGCCACCACAa------cctgattcgggattcagttgggcttccagccagtgccataaggaaaaccattctggggctcttgagaggggcaaagcatattttgcatgtgggagaaatgttaatagtttgtggcccgagTACAAGCTgtggtttacgaaagactgctacagattcctacta-tgcttctcatcaagaggtggaatctaatcaccttccccccttgaattgtggctggtctcagtgatgagtacgactag-acagtgtggcaggagggaagctctgggacttctgaggggcgatcatgagaggccttacagcttctgcctgggcctcttggacacacaccctgggagaagccagacaaacc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35354690 357 + 155834243 taacAGGCCACCAAAC------CC--------AATCTGGTtgggctttcagctagcgccataaggaaaacagttctggggctcttgagaggggcaaagtatattttgcatgtgggagaaatgttaatagtttgtgaccagagggcaagctgtggtttattaaagactgctgcagattcttacta-ttcttcttatcaaaaggtggaatctaatcaccttcgcc-cttgaattgtggctgctctcagtgaagagtatgactaatacagtgtggcaggagagatgctctcggacttctgaggggcgataatgagaagccttacagcttctgcctgggcctcctgaacacacaccctgggagaagccagacaaatc i calJac3.chr7 C 0 C 0 s micMur1.scaffold_35832 340 328 + 9510 --------------------------------------GTTGGACTTTCAG-CGGCACAGTAGGGAAAGAT-TTCTGGGCTGATGAAGAAGGGCAAAGTAAAATTTGTGTGTAAGACAAAAAGAAAAAATGGGTAGCCAGAAGGCAAACtgtggtttattaaagactcacacaaa-tcttaccactgccttt--ttgtgagctggagtctaacgcccccccccccc--agtcatggatggtcttagtgatgggcctgactaagaccacgtggtggaaaagatgttttgggccttctgagggcagaccataagaagccttgcagcttctgcctgggcctcttgcaaagatgctctgagaCAAGCTGCATAAACC i micMur1.scaffold_35832 C 0 I 6 e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=215795.000000 s hg38.chrUn_GL000218v1 84257 326 + 161147 tgacta-cctgacactgccagactgggaggaagtccgtgctggccacaaagagaggGCTTGGTGCCTGCTCCATGTCCCCAGCCACTAGAGTCCTTCTGG-------------------------------------------------------------------------------TGCCTGCTtcacgtccccagccactagagtccttccagatgagaccagggacatcatgaagcagccaacccacattgccctgtccagtgtcttgacccagaaaattgtgacatgtaaaaagaataaattcctggtttaagccagtaaggttactggtacattgttacattgcagataattaaaacCTTGAAAAACTCATGAGAGATCCCAAGTAAAACCTTGATCTG s panTro4.chr3 77156970 326 + 202329955 tgacta-cctggtgatgccagactgggaggaagtctgtgctggccacaaagagacggctgggtgcctactccacgtccccagccactagagtccttctgg------------------------------------------------------------------------------gtgcctgctccacgtccccagccactagagtccttccagatgagaccagacacatcatgaagcagccaacccacaccaccctgtccagtgtcttgacccagaaaattgtgacatataaaagga-taaattcctggtttaagccagcaaggttactggtacgttgttacatcacagataattaaaacGTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327656 287 + 202140232 tgacta-cctgatgctgccagactgggaggaagtccgtgctggccacaaagagagggctggg---------------------------------------------------------------------------------------------------------------------tgcctgctccacatccccagccactagagtccttccagatgagaccagagacatcatgaagcagccaacccacactgccccatccagtgtcttgacccagaaaattgtgacatgtaaaaagaataaattcctggtttaagccag-aaggttactggtacactgttacatcgcagataattaaaacCTTGAAAAACTCATGAGAGATCACAAGTAGAACCTTGATCTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 86210 405 - 139590 tgacta-cctgacgctgccagactgggaggaagtccgtgctggccacaaagagagggctgggtgcctgctccacgtccccagccactagagtccttctgggtgcctgctccatgtctccagccactagagtccttctgagtgcctgctccacttccccaaccaccagagtccttctgggtgcctgctccatgtccccagccactagagtccttccagatgataccagagacatcatgaagcaggcaacccacactgccctgtccagtgtcttgacccagaaaattctgacatgtaaaaagaataaattcctggtttaagccagtaaggttactggtacgttgttacatcagagataactaaaaGGTTGAAAAACTCGTGAGAGATCACAAGTAGAACCTTGATCTG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35355047 280 + 155834243 tgactaccctgacactgctaggctgggaggAAGTATGTGCTGGCCACAAAGAGAGGGCTGGG---------------------------------------------------------------------------------------------------------------------TGCCTGCTCCATGTcccctgccact-gagtccatccagctgagaccagagacatcatgaagctgccaacccacactgccctgtccagcgtcatgacccagaaaatTGTAACATGTAAAAAGAATAAATTTCTAGTTTAAGCCAGTAACGTTACTGG--------TACATAGCAGATAATTAAAACCTTGAAAAACTCATGAGAGATCCCAAGTAGTACCCTGATTTG i calJac3.chr7 C 0 C 0 e micMur1.scaffold_35832 668 6 + 9510 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=61096.000000 s hg38.chrUn_GL000218v1 84583 71 + 161147 AAACATGGCATGTGGCGATTTATATTGAGTATTAGGTTAAAAATGCAAGATTGGAGAATAGTTAATATTTT s panTro4.chr3 77157296 71 + 202329955 AAACATGGCATGTGGAGATTTATATTGAGTATTAGGTTAAAAATGCAAGAATGGAGTATAGTTAATATTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42327943 71 + 202140232 AAATATGGCATGTGGAGATTTATATTGAGTATTAGGTTAAAAATGCAAGAATGGAGCATAATTAATATTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 86615 71 - 139590 AAACATGGCATGTGGAGATTTATATTCAGTATTAGGTTAAAAATGCAAGAATGGAGCATAGTTAATATTTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35355327 66 + 155834243 AAATATGGAATGTGGAGATTTGTAT----TATTAGGCTAAAAAGGCAAGAAT-GAGCATATTTCATACTTT i calJac3.chr7 C 0 C 0 s micMur1.scaffold_35832 674 67 + 9510 AAACAAGAAATGTGTAGGTTTCTAT----GATTAGGTTCAAAACACAGAAGTAACAAATATTTTACATTAT i micMur1.scaffold_35832 I 6 N 0 e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=269899.000000 s hg38.chrUn_GL000218v1 84654 373 + 161147 ACGTTAAAGCTAAAACTATAATTGCCCACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAACAG--TTGGAACTGATGCACACATCCGTTTTTCCTTACTCATTTT-AAGCAGCTATCTGAAATAGGAAGCATAATATAATCTTT-AAAGAATCTGAAAATATGACAGAAATGTTtaaactataaacatatattgtaaatgttagcatattatatacattgcatattaacataagc----taaaatcattgatataaatttatataAACAAAAGGTAGAAAATATGACAATGTTCTTCTTGTTTTTTGTCTTTGCATATTTCTTTATTGGCCCTTGTCAAA s panTro4.chr3 77157367 369 + 202329955 ACGTTAAAGCTAAAACTACAATTGCCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAACAG------AACTGATGCACACATCCGTTTTTCCTTACTCATTTT-AAGCGGCTATCTGAAATAGGAAGCATAATATAACCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACTATAAACATATATTGTATATGTTAGCATATTGTATACATTGCATATTAACGTAAGC----TAGAATCATTGACATAAATTTATATAAACAAAAGGTAGAAAATATGACAATGTGCTTCTTGTTTTTTGTCTTTGCATATTTCTTTATTGGCCCTTGTCAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42328014 374 + 202140232 ATGTTAAAGCTAAAACCATAATTGTCTACTTAAAATTTTCAGTTAATTAGGTTGTCACTTTTTGTTCTTAACCAAGAAATCAACTA-------GAGTTTTAGTCCATAAACAG------AACTGATGCACACATCCATTTTTCCTTACTCATTTT-AAGCGGCTATCTGAAATAGGAAGTGTAATATAATCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACCACAAACATATATTGTATATGTTAGCATATTGTATACATTGCATATTAACATAAGCTAGATAGAATCACTGACATAAATTTATATAAACAAAAGGTACAAAATATGACAATTTGCTTCTTG-TTTTTGTCCTTACATATTTCTTTATTGGCCCTTGTCAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 86686 369 - 139590 ACGTTAAAGCTAAAACTATAATTGCCTACTTAAAATTTTTAGTTAATTAGGTTTTCAATTTTTGCCCTTAACCAAGAAATCAACT---------AGTTTTAGTCCATAAACAG------AACTGATGCACGCATCCGTTTTTCCTTACTCGTTTT-AAGCAGCTATCTGAAATAGGAAGCATAATATAATCTTT-AAAGAATCTGAAAACATGACAGAAATGTTTAAACTATAAACGTATATTGTATATGTCAGCATATTTTATACATTGCATATTAACATAAGC----TAGAATCATTGACATACATTTATATGAACAAAAGATAGAAAATATGACAATGTGCTTCTTGTTTTTTGTCTTTGCATATTTCTTTATTGGCCCTTGTCAAA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35355393 371 + 155834243 ATATTAGAGCTAAAACTATAA----CTATTTAAAATTTTCCATTAATGAGGTGGTCA-TTTTTGTTC-------AGAAATCAACTACTAACTGCAGTTTGAGTCCATAAACACATTTATAAGTGATGCACACATCCATTTTTCCTTACTCATTTTCAAATGGCTGTCTGAAATAGGAAAC--AATATAATCTTTAAAAGAACCTGAAAACATGACAGGAATTTTTAAACTATAAAC--ATATTATATGTGTTAGTATATTATACACATTGTATATCAACATAAACTAGATAGAATCATTGACATAAGTTTATATAAATGAAAGGTAGAAAATATGACAATGTG---CTTGTTTTTTGTCTTTGCATATTTTTTTATTGACCCTTGTCAAA i calJac3.chr7 C 0 C 0 e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=1794.000000 s hg38.chrUn_GL000218v1 85027 2 + 161147 CG s panTro4.chr3 77157736 2 + 202329955 CG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42328388 2 + 202140232 CA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 87055 2 - 139590 CG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35355764 2 + 155834243 CA i calJac3.chr7 C 0 C 0 s tupBel1.scaffold_108778.1-206903 134421 2 + 206903 CA i tupBel1.scaffold_108778.1-206903 N 0 I 2242 e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=2781462.000000 s hg38.chrUn_GL000218v1 85029 3696 + 161147 TGACCCACTAACTC-CTGAATGCTTTCTC-TCTCCCCATGGATTCCTAAGGATGTCACCACA-GTGCTGGCCAGATGCACAGATCACAGGTGACTGAACCTCATCACCCCACGAACACACCCTTCAGGTTTTGCCAAGAATGACACTGTAAATATAACAAAGCTCCTGTGCTTGTTAGTGAACACCAATTCAGCTTCTCTC----------CTGTATTTGGAAATCAGGATGAGATGAaaacaacaagcaggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcgagtggatcacctgaggtcgggagttcgaga-caccctgatcaaaacagagaaaccccatctctactaaaaatacaaaattagccgggcgtggtggcacatgcctgtaataccagctactcaggag-ctgaggcaggagaattgcttgaacccaggaggtggaggctgcagtgagctgagatcacaccactgcgctctagcctgggcaacaagagcgaaactctgtctcaaaaaataaaaa---taaaaataaaagaacaaggaaacaaaagcaacaagGCTTGACACCAGATGAGCCTGAATCTAAGCAAGAAAAGCCCAGAAGAAATCCCAT--------TTTGGGTCACTGGCTGCATGGTAGTAATGCCATACACATAA-GGAAGAGAAGAGGATGTGGCTTTCACTTCGAATTTTTTGAGCTTAAGGTAAA-TTTGGATAGCTACAAAGAAGCATTCAACAGAGAGTTAAACCTATGATGGAAAGACT---GAAGAGGTCCAAGCTGTAGAGAAACAGGACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGCAAGATGAACAGGGACCAATGGAACATTTGGATAAGCTGTTGAG-AAGAAAGGAGAATTCAGAGAAAAA-GAACTGTCAGTGAGGTCATAATAGGAACtgttacagtgaactaaatatggcctgggaaggactctgtacttctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaagactgaaaacctaacttaggagtatgtgcctaaaacagtagctgagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtggtcag-ctgtgttcaaataaggcaaatgctgagcactgtaaccagtccagttgtttctggacctcactgctgagaactgtaatggacccagtt-gcttctagacctcact---------------------------------------------------------------------------cctcacttcagatttttgtacatcatgttccc-tttattgtctataaatcttccaccatgtgtctgtgctggagtctcactgaatctgctgtgattct-gggggctgcctgattcgtgaatcattcattgctcaattaagctcctttaaatttaattcagctgaagattttcttttaataGATGGTGTCAGAAGTGGGATCCGTGGGAGCAGGACTGCTAGGGCCTCTGGAGCTATACTGTGGTGAGCAGTGTTGCTAAGCCTTCTAATGACCCCC-AGAGTGCTGAG-GTACAAGGAAGGAACCTGAAAGGACCCATTTGTGATGGCAGCAGTGGCCCACGTGGAGCAGTTGCTATGGAGACACTggctgcagtggggaggagtggctggggc---tgtgcactcctcagagctggtgggagccaggaatgggtgggagacctgccccttctaaattatcaggcaggagccccgccctcccaggcacagctgcagccatccagccatgactgcaaacccaggcatctctgcactctcagaggcccagcaagcccccctgcccc-gcaggctcagttgtacctggtcctgccacctggcgtctctctgcttccagagcccactccaaattcagatccaagttgaggccaaacctgggcacagtcacaacctggcctggtttgtgcaagctcagggcagtgctgacatgccagccccctgccacctcggc--cccctccagaatttgggcactggcaagcacaggagggaggctgaggtgtggctaagagtggctcagcagtggccggaaggccctcctcagctcgaac-gcctgggcactatgggcacagctacccaccgtgcgtctcctctcagctgctgagagctgaacagacgttgggatgacctgcctgcagaaaggagctacccactgcaggtctcctctgagctgtactgtggctcaataaagcacctcttcaccttgctcaccttctacttgtccacatacctcatttttcctggactcaggacaagaactcaggacctgccaactagcagggctgaaagaggtgtaacataaacagg-------gctgaaacgctatcctttcttgccaaattgcaggcaagaagaagagaagagagaaggagagaagagctgtgtcccttcagggaacacagacctaggagctcctccaaccagggctgtgacaccttctttggggctctgcaggtcct-gcatctccaagcttctgggtgccactgcattccctgatacccacagtggaagttgtttgcagtcggcctggtccagctgcagcctcacagggagctggcacct------gtgcctggagctgcccaccccactgcagctggcatgcttggctgtgtgcagtggccagatcccatgctcgcttgctcacacacccctcactgctctgtacccagctcgcccttggcaggtgtgggatccagaccactagcatgagctgagtggacagaactaacccagtgggcccgagcaaaacacaggtaaaggtgccaccagc--cagaggtttcaggcagaaaagtgacacctcaggattctgtaacacttgtgtcctttgatctctcggagcagctggagatcatggtaaattttctctcggatttcagagctccatggatttgtgttttgagctc---tgagtttctttgagcaaatttctgttccaaactgctatccagccatgactggctggatgttttagaagttataacagaaaagggaccgggtccaggatcagatttgatccagtagttaattggcttgaatccagttccagttagaggcctcctacatctgactgggtcagaaggaaagtggtagtaaatgataatattggaa-gattgtaacatttggcttttgaaaattcacagggatttttgtgttctacccctttgtttcatttttctcgcacgcttaggcaggaaaaaaaaatcattggctaagttaatgaagggaacctgggagtaaagccaatattttaggtaaaaataggatccttaatttctggaaaactaagctccttctggctaatacattaggcctgggaagcagcaaagtcttacagaaatggcaaaatcttatt-aagataacttacagtggaacatttcaaatgaataatgccctgaagtgcatttaaaaatgagggttcccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagagatggcaccgcccatctgggagcaagtttgagtcttaccagtttgatactgggtgctgagcaaagtggcacgtgtc-tatgttttgtcacatgtattttgctctgggcagaatgaaaaatgttaatttggttactccaagcaaccccttgggcagcatcttgcaaagctgagtggattcttcctgtgattccatgattttccattgtgatgcagcttggcccccagag s panTro4.chr3 77157738 3687 + 202329955 TGTCCCACTAACTC-CTGAACGCTTTCTC-TCTCCCCATGGATTCCTAAGGATGTCACCACA-GTGCTGGCCAGATGCACAGGTCACAGGGGACTGAACCTCACCACCCCACAAACACCCCCTTCAGGTTTTGCCAAGAATGGCACTGTAAATGTAACAAAGCTTCTGTGCTTGTTAGTGAACACCAACTCAGCTCTTCTC----------CTGTATTCAGAAATCAGGATGAAATGAAAACAAGAAGCAggccgggcatggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcgggagttcgagaccaccctgatcaaaacggagaaaccccatctctactaaaaatacaaaattagccgggcgtggtggcacatgcctgtaataccagctactcaggagactgaggcaggagaattgcttgaacctgggaggtggaggctgcggtgagccaagatcgcaccactgcactccagcatgggcaacaagagcgaaactctgtctcaaaagaaaaaaaaattgaaaataaaagaaCAACCAAACAAAAGTAACAGGGCTTGACACCAGATGAGCCTGAATCTAAGCAAGAAAAGCCCAGAAGAAATCCCAT--------TTTGGGTCACTGGCTGCATGGTAGTAATACCATACACATAAGGGAAGAGAGGAGGATATGGCTTTCACTTTGAATTTTTTGAGCTTAAGGTAACTTTTGGATAGCAACAAAAAGGCATTCAACAGAGAGTTAAACCTATGATGGAAAGACT---AAAGAGGTCTAAGCTGTAGAGAAACAGGACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGTGGGATGAACAGGGACCAACAGAACATTTGGATAAGCTGTTGAG-AAGAAAGGAGAATTCAGAGAAAAA-GAACTGTCAGTGAGGTCATAATAGGAACtgttacagtgaactaaatatggcctgggaaggactctgtaattctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaacactgaaaacctaacttaggagtatgtgcctgtaacaacagctcagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcag-ctgtgttcaaataaggcaaatgctaagcactgtaaccagtccagttgtttctggacctcactgctgagaactgtaacggacccagttggcttctggacctcact---------------------------------------------------------------------------cctcacttcagatttctgtacatcacattccc-tttattgtctataaatcttccaccatgtggctgtgctggagtctcacccaatctgctgtgattct-gggggctgcctgactcctgaatcattcattgctcaattaagctcctttaaatttaattcagctgaagattttcttttaCTAGATGGTGTCAGAAGTGGGATCTGCCGGAGCAGGACTGCTAGGGCCTCCGGAGCAATAGTGTGGTGAGCAGGGTTGCtagggcttctaatgacccccaagagtgctgag-gtacaagcaaggcacctgcaaggacccctttgtgATGTCAGCAGGCGCCCATGTGGAGCAGTCCCTACGGAGACACTggctgcagtggggaggagtggctggggctgttgtgcgctcctcgaagctggt-ggagccaggaacgggtgggagccccgccccttctaaattggcaggcaggagccccaccctcccaggcacagctgcagccatgcagccatgactgcagacctgggcatctctgcactctcagaggcccagcaagaccccctgcccctgcaggctcagtcatacctggtcctgccacctggcgtgtctctgctcccagagcccactccaaatttggatccaagttgaggccaaacccaggcacagtcgcaacccggcccagtgtgtgcaagctcagggcagtgctgacatgccagccccctgtcacctcggc--tccctccagactttgggcactgatgagcacaggagggaggttgaggtggggctaagtgtggctcagcactggcctgcaggcactcctcagctcaaacagcctgggcactgtgggcacagctacccaccatgggtctcctctcagctgctgagagctgaacagacatcaggatgacctacctgcagaaaggagctacccactgcaggtctcctctgagctgtaccgttgctcaataaagcacctcttcaccttg-tcaccttctacttgcccacatacctcattcttcctggatgcaggacaagaactcgggacctgccaaccagcagggctgaaagaggtgtaacataaacagg-------gctgaaacgtgccccttgcttgccaaattgcaggcaagaagaagagaaaaaagaaggagagaagagctgtggcccttcaggaagcccagacctaggagctccccaagccagggctatgacaccttctttggggctctgcagttcct-gcatctccaagcttccgggcgccactgcattccctgatacccacagtggaagctgtttgcagtcggcctggtccagctgcagcctcacaggaagctggcacctgtgtcagtgcctggaactgcccaccccaccgcagctggcatgcttggctgtgtgcagtggccagatcccatgctcgcttgctcacacacccctcactgctctgtacccagctcgcccttggcaggcgtgggatccagacaactagcatgagccgagtggacggaacgaacccagtgggcctgagcaaaacacaggtaaaggcgacaccagc--cagaggtttcaggcagaaaagtgacaccccaggattcagtaacacttgtgccctttgacctctcagagcagctggggatcatggtaaattctctctcggatttcagagctccatggatttgtgttttgag--c---tgagtttctttgagcaaatttctgttccaaat------------------------aggctttagaagttatgacagaaacgggactgggtccagaatcagatttgatccagtagttaactggcttgaatccagttccagttagaggcctcctacatctgactgggtcagaaggaaagtgg-agtaaatgataatattggaacggttgtaaaatttggcttttggaaattcacagggatttttgtgttctacccctttgtttcatttttctcgcatgcttaggtaggaaaaaaaaatcattggctaagttaatcaagggaacctaggagtaaagccaatattttaggtaaaaataggatccttaatttctggaaaactaagttccttctggctaatacattaggcctgggaagcagcgaagtcttacagaaatggcaaaatcttactaaagataacttacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggctcccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagagatggcacggcccatctgggagcaagtttgagtcttaccagtttgatactggatgccaagcaaagtggctcatgtc---tgttttgtcacatgtattttgctctggacagaatgaaaaatgttaatttggttactccaagcaaccccttgaacagcatcttgcaaagctgagtggattcttcctgtggttccatgattttccattgtgatgcagcttggcccccagag i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42328390 3752 + 202140232 TGTCCCACTAACTC-CTGAATGCTTTCGC-TCTCCCCATGGATTCCTAAGGATGTCACCACACATGCTGGCCAGATGCACAGGTCACAGAGGACTGAACCTCATCACCCCACAAACACACCCTTCAGGTTTTGCCAAGAATGACAACGTGAATGTAACAAAGCTCCTGTGCTTGTTAGTGAACACCAACTCAGCTACTCTC----------CTGTATTTGAACATCAGGATGAAATGAAAAGAACAAGCAggccgggcacagtggttcatgcctgtaatcccagcactttgggaagctgaggcggggagatcacctgaggtcgggagttcgagaccaccctgaccaacacggagaaaccccatctctactaaaaatacaaaattagccaggcgtggtggcacatgcctgtaatcccagctactcaggaagctgaggcaggagaatcgcttgaacccaggaagcggaggctgcggtgagctgagatcgcaccactgcattccagcctgggcaacgagagcgcaactctgtctcaaaagaaaaaaa-attaaaaataaaagaaCAAGCAAACAAAAGTAACAGGACTTGACACCAGATTAGCCTGGATCTAAGCAAGAAAAGCCCAGAAGAAATCCTAT--------TTTGGGTCACTGGCTGCAAAGTAGTAATACCATACAAATAAGGGAAGAgaggaggatgtggctttcactttgaattttttgagtttaaggtaacttttggatagctacaaagaagcattcaacagacagttaaacctacgatggaaagact---gaagaggtccaagctgtagaGAAACAGGACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGTGGGATGAACAGGGACCGATGGAACATTTGGATAAGCTGTTGAG-AAGAAAGGAGAATTCAGAGAAAAAGGAACTGTCAGTCAGGTCATAATAGGAACtgttacagtgaactaaatatggcctgggaaggactctgtacttctagatttgagtccctgtggacaaactgcaacctaacttaataggtagaaatactgaaaacctaacttaggagtatgcacctgtaacaatagctgagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcag-ctgtgttc-aataaggcaaatgctgagaactataaccagtccagttgtttctggacctcactgctgagcactgtaacagacccagtt-gcttctggacctcactgctgagaactgtagccagtccagttgtttctggacctcactgctgagaactgtaacgaacccagttgtttctggacctcacttcagatttctgtacatcacgttccc-tttattgtctataaatcttccaccatgtggctgtgctggagtctcacagcatctgctgtgattct-gggggctgcctgattcgtgaatcattcattgctcaattaagctcctttaaatttaatttggctgaaga-----ttttattAAATGGTGTCAGAAGTGGGATCTGTGGGAGCAGGACTGCTAGGGCCTCCGGAGCTATAGTGTGGCGAGCAGGGTTGCTAGGGCTTCTAATAACCCCCAAGAGTGCTGAG-GTACAAGCAAGGCACCTGCAAGGACCCCTTTGtgatggcagcagtggcccacgtggagcagtcgctaaggagacactggttgcagtggggaggagtggctggggc---tgtgcgctcctcaaagctggtgggagccaggaacgggtgggagccccgccccttctaaattggcaggcaggagccccgccctcccaggcacagcggcagccgtccagccatgactgcagacccgggcatctctgcactgtcagaggcccagcaagcccccctgcccctgccggctcagacgtacctggtcccgtcacctggcgtctccctgctcccagagcccactccaactttggatcaaagttgaggccgaacccaggcgctgtcgcaacccagccgggtatgtgcaagctcagggcagtgctgacctgccagctccctgccacctcggc--cccctccagactttgggcactgacaagtacaggagggaggttgaggtggggctaagggtggctcagcactggcctgcaggcgcccctcagctcaaacagcctgggcgctgtgggcactgTTACCCAGCATTggtctcctctcagctgctgagagctgaacagacatcaggatgacctgcctgtagaaaggagctacccactgcaggtctcctctgagctgtactgttgctcaataaagcacctcttcaccttgctcaccttctacttgcccacatacctcattcttcctggacacaggacaagaactcaggacccgccaaccagcagggttgaaagaggtgtaacataaacagggccccttgctgaaacacgccccttgtttgccaaattgcaggca---------------agaaggagagaagagctgtggcccttcagggagcccagacctaggagctccccaagccagggctgtgacatcttctttggggctctgcagttcct-gcatctccaagcttccaggcgccactgcattccctgataatcgcagtggaagctgtttgcagtctgcctggtccagctgcagcctcacagggagctggcacctgtgccggtgcctggagctgcccaccccaccacagctagcatgcttggctgtgtgcagtggccagatcccacactcgcttgctcacacaaccctcacttctctgagcccagctcacccttggcaggtgtgggatccagaccattagcatgagccgagtggacagaacgaacccagtgggcccgagcaaaacacaggtaaaggcgccaccagc--cagaggtttcaggcagaaaagtgacaccccaggattctgtaacacttgtgccctttgacttctcggagcagatggggaccatggtaaattctctctcagatttcagagctccatggatttgtgttttgagctc---tgagtttctttgagcaaatttctgttccaaac------------------------tgggtttagaagttatgacagaaacgggacccagtccaggatcagatctgatccagtagttaactggcttgaatccagttccagttagaggcctcctacatctgactgggtaagaatggaagtggtagtaaatgataatattggaggggttgtaaaatttggcttttgaaaattcacagagatttttgtgttctacccctttgtttcatttttctcacacacttaggtaggaaaaaaaaatcattggctaagttaatcaagggaacctaagagcaaagccaatattttaggtaaaaataggatccttaatttctggaaaactaagttccttctggctaatacattaggcctgggaagcagcaaagtcttacagaaatggcaaaatcttactaaagataacttacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggctcccaaattagtctcatctagggatgcctattaatatgcagaagcttctaaaaagatttagagatggctcagcccatctgggagcaagtttgagtcttaccagtttgatactgggtgctaagcaaagtggctcatgtc-tatgttttgtcacatgtattttgctctgggcagaatgaaaaatgttaatttggttactgcaagcaaccccttgggcagcaccgtgcaaagctgagtggattcttcctgtggttccatgattttccattgtgatgcagcttgggccccagag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 87057 3682 - 139590 TGTCCCACTAACTCTCTGAATGTTTTCTT-TCTCCCCATGGATTCCTAAGGATGTCACCACA-GTGCTGGCCAGATGCACAGGTCACAGGGGACTGAATCTCATCACCCTACAAACACACCCTTCAGGTTTTGCCAAGAATGACACTGTAAATATAACAAAGCTTCTGTGCTTGTTAGTGAGCACCAACTCAGCTCCTCTC----------CTGTATTTGGACATCAGGATGAGATGAaaacaacaagcaggccacgcacggtggctcatgcctctaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcgggagtttgagaccaccctgatcaacacggagaaaccccatctctactaaaaatacaaaattagccaggtgtggtggcacatgcctgtaataccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggtggaggctgtggtgagccaagatcgcaccactgagctccagcctgggcaacaaaaatgaaactctgtttcaaaagaaaaaaaaatttaaaataaaagaacaagcaaacaaaagtaacaagGCTTGACACTGGATGAGCCTGGATCTAAGCAAGAAAAGCCTAGAAGAAATCCCAT--------CTTGGGTCACTGGCTGCATGGTAGTAATACCATACACAGAAGGGAAGAGAGGAGGATGTGGCTTTCACTTTGAATTTTTTGAGCTTAA-GTAACTTTTGGATAGCTACAAACAAGCATTCAGCAGACAGTTAAACCTATGATGGAAAAACT---GAAGAGGTACAAGCTGTAGAGAAACAGCACTG-CAAACCACAAAGGGCTGAATCAGTCAAGGAGAACTGCAGGGTGGGATTAACAGGGACTGACGGAACATTTGGATAAGATGTTGAGAAAAAAAGGAGAATTCAGAGAAAAA-GAACTGCCAGTGAGGTCATAATAGGAACtgttacagtgaactaaatatggcctaggaagaactctatacttctatatttgagtccctgtggacaaactgcaacctaactgaataggtagaaagactgaaaacctaacttacgagtatgtgcctataacaatagctgagtcctggccaatcccaacagccaaacttctgccactcacacactgctgagtgttcaa-ctgtgttcaaatgaggcaaatgctgagcactgtaaccagtccagttgttttgggacctcacagctgagaactgtaacagatccagtt-gcttctggacctcact---------------------------------------------------------------------------cctcacttcagatttctgtacatcacgttccc-tttattgtctataaatcttccatcatgtagctgtgctggagtctcatcaagtctgctgtgattctggggggctgcctgattcgtgaatcattcattgctcaattaagctcctttacatttaatttggctgaagattttattttaataGATGGTGTCAGAAGTGGGAACTGCGGGAGCAGGACTGCTAGGGTCTCCGGAGCTatagtgtgacaagcagggttgctagtgcttctaatgacccccaagagtgctgag-gtacaagcaaggcacctgcaaggacccctttgtgatggcagcagtggtccacgtggggcagttgctatggaaacac---------tggggaggagtggctggggc---tgtgcgctctttgaagctggtgggagccaggaaggggtgggagccctgtcccttctaaattgataggcaggagccctgccctcccaggcacagctgcagccatccaaccatgactgcagacctgggcatctctgcactctcagatgcccagcaagcccccctgccccttcaggttcagtcatacctggtcccgccacctggcatctctctgctcccagagcccactccaactttggatccaagttgaggctgaacccgggcaccgtcgcaacccagcccagtgtgtgcaagctcagggcagtgctgacctgccagccacctgccacctcggc--cccctccagactttgggcactgacgagcacaggagggaggttgaggtggggccaagagtggctcagcactggcctgcaggcactcctcagctcaaacagcctgggcactgtgggcacagctacccactgtgggtctcctctcagctgctgagagctgaacagacatcaggatgacctgcctgcagaaaggagttacccactgcaggtctcctctgagctgtactgttgctcaataaagcacctcttcaccttgctcaccttctacttgcccacatacctcattcttcctggatgcaggacaagaacttgggacccaccaaccagcagggctgaaagagttgtaacataaacagg-------gctgaaatgtgccccttgcttgccaaattgcaggcaagaagaagagaagagagaagtagagaagagctgtggcccttcagggagcgcagacctaggagctccccaagccagggctgtgacaccttatttggggctctgcagttcct-gcatctccaagcttccgggcgccactgcattccctgatacccgcagtggaagctgtttgcagtcggccttgtccagctgcagcctcacaggaatctggcacctgtgccggtgcctgaagctgcccaccccaccacagctggcatgtttggctgtgtgcagtggccagatcccatgctcacttgctcacacacccctcaattctctgtacccagcttgcccttggcaagtgtgggatccagaccattagcatgagccgagtggacacaacgaacccactgggcccgagcaaaacacaggtaaaggtcccaccagc--cggaggtttcaggcagaaaagtaacaccccgggattctgtaacacttgtgccctttgacctctcggagcagctggggattgtggtaaattctctctcggatttcagagcttcatggatttgtgttttgagctc---tgagtttatttgagcaaagttctgttccaaag------------------------tgggtttagaagttatgacagaaaagggaccgggtccaggatcagatttgatccagtagttaattggcttgaatccagttcctgttagaggcctcccacatctgactgggtcagaaggaaagtggtagcaaatgataatattggacgggttgtaaaatttggcttttgaaaattcacaagaatttttctgttctatccctttgtttcatttttctcgcacacttaggtaggaaaaaaaaatcattggctaagttaatcaaggggacctaggagtaaagccaatattttaggtaaaaataggatccttaatttctggaaaactaagttccttctggctaacacattaggcctgggaagcagcaaagtcttacagaaatgacaaaatcttactaaagataacttacagtggaacattccaaatgaataatgccctgaagtgcatttaaaaatgagggtt-ccaaattaatctcatctagagatgcctattaatatgcagaagcttctaaaaagatttagagatggcatggcccatctgggagcaagtttgagtcttaccagtttgatactgggtgctaagcaaagtggctcatgtc-tatgttttgtcacatgtattttgctctgggcagaatgaaaaatgttaatttggttactccaagaaacccgttgggcagcatcttgcaaagctgagtggattcttcttgtggttccatgattttccactgtgatgcagcttgacctccagag i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35355766 3598 + 155834243 TGTCCCACTAACTC-CTGAATGCTTTCTCTTTTCCCCATGGATCCCTAAGGATGTCAGCACATGTGCTGGCTAGACGCACAGCTTGCAAGGGATTGAACCTCATTACCCTGCAAACACACCCTTCAGGTCTTGCCAAGAATGACAATGTAAATGTAACAAAGCTTCTGTGCTTATAAGTGAGCACCAACTGAGCTCCTCCCCTGACTGGCACTGTATTCACACATTGAGATGAAATGAAAAGAAAAAGCAggccgggcacagtgactcacacctgtaatcccagcactttgggaggccaaggcgggtaaatcacctgaggtcgggagtttgagatcagcctgatcaacatggagaaaccctgtttttactaaaaatacaaaatcagctgggcacggtggcgcatgcctgtaattccagctattcgggaggctgagggaggagaactgcttgaacccaggaggtggaggctgcagtgagccaagatcgcgccattgcagtccaggctgggtgacaagagcgaaaccctgtctcaaaaaaaaacaaaaacaaaa--taaagaaCAAGCAAACAAAAGTAACAGTTCTTGACACCAGATGAGGCTGAATCTAAGCAAGAAAAGTCCAGAAGAAACCCCATTTTAGTGGTTTGAATCACTGGCTGGATGGTAGTAATACCATACACATAAGGGAAGAGAGGAGAATGTGGCTTTCACTTTGGATGTTTTGAGCTTAAGGTAACTTTTGGATAGCTACAAAG--------------CAGTTAAACATATGATCAAAGGACTGAGGAAGAGGTCCTAGCTGCAGAGAAATGGGACTGCCAGACCATGAAGGGCTGAATCAGTCAAGGAAAACTGCAGAGTCGGATGAACAGGGACTGATGGAACATTTGGGTAAGTTGTTGAG-AAG-TAGAATAATTCAGAGAAAAGGGAACTGTCAGTGAGGTCACAAGAGGAACtattaaagtgaactgaatctagtctggca--gactctgtacttctgtatttgagt-cttgtggacaaactgcaactcaacttaataggcagaaacactgaaaacccaacttaggagtatgcacctgtaacagtagctgaatcttacccaatcccaaccaccaaacttcagccactcatacactgccgagtgttcagactgcgttcaaataagggaaatgctgagaactgtaaccaatccagttgtttctgta----------------------------------------------------------------------------------------------------------------------------cctcacttcagatttctgtacatcactttccctttttttgcctgtaattcttccaccatttggctgtgctggagtctctcagaatctgctgtgattct-gggggctgcctgatttgtgaatcatttattgctcagttaagctttgttaaatttaatttggctaaaggttttcttttaataGATGGTGTCATAAGTGGGATCTGTGGGAGCAGGACTCCTAGGGCCCCCGGAGCTATAGCATGGTGAGCAGGGTTGCtagggcttctaacgacctccaagagtgctaagcgaacaagcaaatttcaagcaaggacccacttgtgATGGCAGCAGCGGCCCCTGTGAAGCAGCCATTGCAGAGACACTggctgcagtgaggaggagtggctgggac---tgtgtgctccacgaagctggtgatagccaggtacaggtggtagccccgccccttctgagttggcaggtggaagccctgccctcccaggcacagctgcagctgtccagccatgactgtagacctaggcacctgtgctctctcaggggtctggcaagcccccctacccctacaggctcagacatacctgatcctaccacctggcctctccctgctcccagagcccactccaactttggatcaaagtcgaggctgaacctgggcactgtcacaacctggctgggtgtgtgcactctca-ggcagtgctaacgtgccagtcccctgccacatcagccacccccccagactctgggcactgacaaacacaggaagga-gtcaaggtggggctaagggtggctcagccctggcctgcaggcacccctcaacacaaataacctgggcac--tgggcatagctacccactgtgggtctcctct---ctactgagagctgaacaaatgtctggatgacctgcctgtggagaggagctacccattccatgtctcctctgagctgtactgttgctcaataaagcatcccttcaccttgctcac---ctacttgtccacatacctaattcttcctggatgtatgacaagaacttgggacccatcaaatggcagggctgaaagaggtgtaacacaaacagg-------gctgaaacataccacttgcctgccaaattgcaggcaatgagaagag--------ggaagagaagagctgtggtccttcagaaagcccagaactaggagctccctgagccagggctgtgacaccttctttggggctctggagttcctggcatctccaagcttccaggcaccactgtgttccctgataccagcagtgggagctgcttgcagtatgcctcgtacagctgcaacctcacagggagctggcacctatgccagttcctggagctacctgccccattgcagttgccatgctt-gctatgtgcaatggccagatcccatgctcacttgctcacatacccctccctgctctgtgcctggcttgacctttgcaggtgtgggatctaggctattagcatgagccaagtagacagagcaaacccagtgtgcccaagcaaaactcaggtaaaggcgccaacagccacagtggtttcaggcagaaaaataacattccaggatcctataacacttgtgcccttt-atctttcggagcagctaggcatcatggtaaattctctcttggatttcagagctccatggatttgtgttttgagctctcttgagtttctttgagcaaa-ttctgtcccaaac------------------------tgggtttagaagttatgacagaaacgggactggacccaggctcagctttgatccagtagttaactggcttgaaccta------gtaagaggcctcctacatctgaatgggtcagaagaaaagtggtagtaaatggtagtattgtaggggttgtacaattcggcttttggaaattcacagcgatttttgtgttctacccctttgtttcatttttcttgcacactt----agggaaaaaaaatcactggc----ccaattaaagcaacctaggagtaaagccagtattttaggtaaaaatgggatcctcaatttctggaaaactgagttccttctggctaatacattaggcctgggaaacagcaaagtcttacagaaatggcaaaatcttactaaggataacttacagtggaacatttgaaatgaataataccccaaagtgcatttaaaaatgagagctcccaaattagtctcacctagggatgcctatcaatatgc------------------------atagcatggcccagctgggggcaagtttaagtcttgccagtttgatattgggtgctaagcaaagtggctcaggtcttatgttttctcacatgtagtttgttctggccagaat-aaaaatgttaatttggttactctaagcaacccccggggcagcatcttgcaaagctgagaggaattttc-tgtggttccatggttttccattgtgttgcaccttggaccccagag i calJac3.chr7 C 0 I 5342 e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=9501.000000 s hg38.chrUn_GL000218v1 88725 18 + 161147 ctataatgtggtgaggag s panTro4.chr3 77161425 18 + 202329955 ctataatgtggtgagGAg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42332142 18 + 202140232 ctatagtgtggtgagGAG i ponAbe2.chr3 C 0 I 4432 s nomLeu3.chr21_GL397661_2_random 90739 18 - 139590 ttataatgtggtgaggag i nomLeu3.chr21_GL397661_2_random C 0 C 0 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=867864.000000 s hg38.chrUn_GL000218v1 88743 3551 + 161147 ggtgacagagcAAGACGCAATCTTT---AAAAAAAAATggccaggtgcagtggctcatgcctgtaatcccaacacttggggaggctgaggcaggtggatcacctgaggtcaggagttcagggccagcctgacctacaaggaaaaaccccgtctctactaaaaacacaaaattagctgggcatggtggcacatgcctctaatcccagctactcaggaggctggggcaggagaatcgcttgaacccgggaggcagggggttgcagtgaaccgagatcacaccattgcactccagcctgggcaacaagagggaaaatccatctgaaaaaaaaaa--agaaagaaTAataggtttgtctataaggttttatgaaaaagtgggtgacatttggctttctctctttaaagaagatgttcaggtaatattaaaaaataatgaaaaatttgtttgccttttaaataaactaccaaaaaaaaaaaa-aggaaaaacaagaggcagatcgtttgtgaagat--gtcttccctctatcaatgagtaaagatttttgccctttaaaacttttttaagtcatgattttaagtaaatgaatgacttacggtgacctggaattctatttcataacatcaagtgtttaaacttttaatatatttaataggcttcccaaaatcaaatttcaacttcaaaattgtcttttctgacctctaaatttgggatactacagacgcccttgaagcacccaaaagagaggtaaacaggactatttaacatgttaagtcacatgggtagcactgtcaaaataaaacataatgttgaacctttttcaggttatatttagtttatgtcatcaacccgttctaaaattgtataggatttctaaaattcttttttttttt--------------------ttttcccctgagacggagtcttgctctgtcacccaggctggagtacagtggcacaatctcggctcactgcaacctccacctcctgggttcatgccattctcctgcttcagcctcccgagtagctgggactacaggcatccaccaccatgccaagctaatttttgtatttttagtagagatggggtttcaccgtgttagccaggatgttctc-atctcctgacctcgtgatccttccaccttggcctcccaaagtgctgggattacaggcgtgagccactgcacctggccagga-ttctaaaattctaatatgcctatatgctatctatcataattacctgttttg-tttgttttgagacggagtttcgctcttgtcacctaggctggagtgcaatggtgtgatctaggatcactgaagcctccacctcctgggttcaagcatttctcctgcctcagcctcccaagtagctgggattacagacaactgccaccacatccggctaattttttttttatttttagtaaagacagagttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacctaacttggcctctcaaagagctgggattacaggaat---------gagccaccacatccaccctaattatggttattaagttattgtagaccacagaaataaccaaatttccttatcaattgtctttaactataactatttaaagtcatttccacagttaattgcttaatgatgatgcagtttctaaaaacttcacaagcatgcaaaattctagaa------------tagaagattcatgaaagaatgaaaaggaccatgaaaaacactcgggaacacaggtttctaataactttaatatcatgggtaaaaattccccataagtttcccgatcccccaataattggactggttaagaattctcaaaagttaggctgggtgcagtggctcatgttggcaatcccagcactttgggaggccgaggctggtggatcacttgaggtcaggagtttgagaccagcctggccaatggtgaaaccccacctctactaaaactacaaaaattagccaggtgtggtggtatgcatctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccaagattgtgccactgcactccaacctaggtaacagagtgagactctgtctcaaaaaaa--aaaaaat---------cctaaagtttaataagaagaccaactggtttataaaactgctaacccaagtaaaacaaaaattgaatatcaaggaaatatttt-ccagatttgcatgctaaatca-ccaatattgaaattgtttagatatataatttaaataaactccatggtctaagccaaattacctataactcatcagttaccagtgccatgcacctaatttgaagaaacagctggtattcaagaggatgtaagtctaatgttaattaagcacagacttatgaagaaccaggatggccacctt-tccgtcttaagtccttaaaacttttgttattaaaagttctgcattccataactcatcatgg-aaagagaaaatgatccaaattaaatatattgctgtggtgatctctaaattgctaaaatagtttataatcaatgtttggtttgtcaaacctatattcctaggaaaacaatcaaaacttcaggtgcatttggttacctgatgggccatttaaacattttataaagggatttcattcagttgtcattttcagtgcatgttttctgattgtaaaaaagctcttccatgcaagagggttgatgttaaaacagtagattattatgctgaagtgtattttcaccagataaagaaagacttttatggttcacagaggacagccaaccccttcacaatctagaatctgatgactggatcttctgagaacatcag---aggactgcccttgccattcacatgacagcaaaacattaaaaccttaaactttgggttcatagtcttacaactcagaagggtccctccacaattggaaccatacaccccttggaacccttaaggtaaagctaacaaggacag-ttcccccccagaagaagatggcatccttaatgtgaacagcttttcccaagatcacagatcaagacttctctactattatgagactcttatcttaagtatctgtgcagctgctaac----atggcatatggagaaaacatcgggtattataaagatttggttgtagggaattaacaaaaaaacccacttagttaagcaagtaaactctttatctaattcattctttaatctatttgattttaggtggtttgatttatggggaccctgagtaaggagcatataccaaattcttggtgttatcccaatagtcataagagtctccctggtgcactgtacttactcaaatgttttaagagtttgcatgcagccatctctaaaatgtcaaatggtatctcttcaactggaatgacaacaga-ttaaaaaaatgtgcaatcataaggacaccgtaacctatgagtgacatgctaaaccagaaacccaaaacaatgggagtgacatgct-aaACCAGAAACCCAAAACAATGGGACTGATGTACTAAAACCGGAACCCAAAACAATGGGAGTGATGTACTAAAAC-----------------------------------------------------------------------CAGAACCCAAAACAATGG s panTro4.chr3 77161443 3609 + 202329955 ggcgacagagcaagacgctatctttaaaaaaaaaaaaTgggcaggcgcagtggctcatgcctgtaatcccaacacttggggaggctgaggcaggtggatcacctgaggtcaggagttcagggccagcctgaccaacaaggaaaaaccccgtctctactaaaaacacaaaattagctgggcatggtggcgcatgcctctaatcccagctactcaggaggctggggcgggagaatctcttgaacccgggaggcagggggttgcagtgaactgagatcacaccattgcactccagcctgggcaacaagagggaaaatccatctcaaaaaaaaaa--a-aaagaaTAatagatttgtctataaggttttatgaaaaattgggtgacatttggctttctctctttaaagaagattttcaggtaatattaaaaaataatgaaaaatttgtttgccttgtaaataaactaccaaaaaaaaaaaacaggaaaaacaagaggcagattgtttgggaaggtaagtcttccctctatcaatgagtaaagatttttgccctttaaaaattttttaagtcatgattttaggtaaatgaatgacttacggtgacctggaattctatttcataacatcaagtgtttaaacctttaatatatttaataggcttcccaaaatcaaatttcaacttcaaaattgtcttctctgacctctaactttgggatgctacagaggcccctgaagcacccaagagagaggtaaacaggactatttaacatgttaagtcacatgggaagcactgtcaaaataaaaaataatgttgaaccttcttcaggttatatttagtgtatgtcatcaatccattctaaaattgtatagaatttctaaaattcttgtttttttttttgtttgtttgtttgtttgtttttttctgagacggagtcttgctctgtcacccaggctggagtacagtggtgcgatcttggctcattgcaagctccgcctcccaggttcacatcattttcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccacgcctggttaatttttgtatttttagtagagatggggtttcgccgtgttagccaggatggtcttgatttcctgacctcgtgatccgtccacctcagcctcccaaagtgctgggattacaggcgtgagccactgcacctggccaggatttctaaaattctaatatgtctatatgctatctatcataattacctgttttgttttgttttgagacagagtttcactcttgtcacccaggctggagtgcaatggtgtgatcaaggctcactgaagcctccacctcctgggttcaagagattctcctgcctcagcctcacaagtacctgggattacagacacctgccaccacaccaggctaa-tttttttttatttttagtagggacagggttttaccatgttggccaggctggtctcaaactcctgacctcaggtgatccacctagcttggcctcccaaacagctgggattacaggcat---------gagccaccacatccaccctaattatggttattaagttattgtaaaccacagaaataaccaaatttccttgtcaattgtctttaactataactatttaaagtcatttccacagttaattgcttaatggtgatgcagtttctaaaaatttcacaagcatgcaaaattctagaatatggtgtctcttagaagattcatgaaagaatgaaaaggaccctgaaaaacactcatgaacacaggtttctaataactttaatatcatgggtaaatattccccataagttccccgattccccaagaactggactggttaagaattcccaaaagttacgctgggtgcagtggctcacgtctgcaatcccagcactttgggaggctgaggccagtggatcacttcaggtcaggagtttgagaccagcctggccaatggtgaaaccctgcctctactaaaaatacaaaaattagccgggtgtggtgatgtgcacctgcaatcccagctactcgggaggctgagg-aggagaatcgcttgaacccaggaggcggaggttgcagtgagccaagatcgtgccactgcactacagcctaggtaacaga-tgagactctgtctcaaaaaaaataaaaaataaaaaattcccaaaagtttaataaaaagaccaactggtttataaaactgctaacccaagtaaaacaaaaattgaataccaaggaaatattttgccagatttgcatgctaaatca-ccaatactgaaattgtttagatatataatttaaataaactccatggtctaagtcaaattacctataactcttcagttaccagtgccatgcacctaatttggagaaacagctggtattcaagaggatgtaagtctaatgttaattaagcacggacttatgaagaaccaggatggctgccttgtccttcttaagtccttaaagcttctgttgttaaaagttctgcattccataactcatcatggaaaagataaaatgatccaaattaaatatattgctgtggtgatttctaaattgctaaaatagtttataaccaatgtttggtttgtcaaacctatattcctaggaaaacaatcaaaacttcaggtacatttggttacccgatgggccatttaaacattttataaagggatttcattcagttttcattttcagtgcatgttttctgattgtataaaagctcttccatgcaagaaggttgatgttgaaacagtagattattatgctgaagtgtattttcaccag-taaagaaagccttttatggttcactgaggacagtcaaccccttcacaatctagaatctgatgactggatcttctgagaacatcagagaaggactgcccttgccatccacatgacagcaaaactttaaaaccataaactttgggttcatagtctcacaattcagaagggtccctccacactcggaaccgtatacccattggaacccttaaggtaaagctaacaagggcagtttctcccccagaagaagatggcatccttaatgtgaacagcttttaccaagatcacagatcaagacttctctactatcatgagactcttatcttaagtatctgtgcagctgctaacacttatggcatatggagaaaacatggggtattataaagatttggttgtagggaattaac-aaaaaaccaacttagttaagcaagtaaactctttatctaactcattctttaatctatttgattttaggtggtttgatttacagggaccctgagtaaggagcatatgccaaattcttggtgatatcccagcagtcataagagtctccctggtgcactgtacttcctcaaatgttttaagagtttgcatgcagccatgtctaaaatgtcaaatggtatctcttcaactggaatgacaagagatttaaaaaaatgtgcaactataaggacactgtaacctatgagtgacatgctaaaccagaaacccaaaacaatgggagtgacgtgct-aaaaccGGAACCCAAAACAATGGGAGTGACATGCTAAAACCGAAACCCAAAACAATGGGAGTGACATGCTAAACC-----------------------------------------------------------------------AAAAACCCAAAACAATGG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 90757 3650 - 139590 ggtgacAGAGAATGATGCTATCTTT---AAAAAAAAATggccaggagcagtggctcacgcctgtaatcccaacacttggggaggctgaggcaggtggatcacctgaggtcaggagttcagggccagcctgaccaacaaggaaaaaccccgtctctactaaaaacacaaaattagctgggcatggtggtgcatgcatctaatcccagctactcaggaggctggggtgggagaatcacttgaacccaggatggagggggttgcagtgaactgagatcgcaccattgcactccagcctgggcaacaagagggaaaatccatctcaaaaaaaaaaTTAATAATAATAatagatttgtctataaggttttatgaaaaattgggtgacatttggctttctctctttaaagaagattttcaggtaatattaaaaaataatgaaaaatttgtttgccttgtaaataaactaccaaaaaaaagaa--agaaaaaacaagaggcacatcattagggaagataagtcttccctttatcaatgagtaaagatttttgtcctttaaaaattttttaagccatgattttaggtaaatgaatgac--actgtgagctggaattctatttcataacatcaagtgtttaaacttttaatatatttaataggcttcccaaaatcaaatttcaacttcaaaattgtcttttctgacctctaactttgggatgctacagaggcccctgaagcaccccaaagagaggtaaacaggactatttaacatgttaagtcacatgggaagcactgtcaaaataaaaaataatgttgaaccttcttcaggttgtatttagtgtaagtcatcaatgcattctaaaattgtataggatttctaaaattcttttttttttc----------------------------tgagatggagtcttgctctgtcacccaggctggagtacagtggtgtgatctctgctcactgcaagctctgcctctcgggttcacgccattttcctgcctcagcctcccgagtagctgggactacagttgccctccaccaagcctggctaatttttgtatttttagtaaggacggggtttcaccctgttagccaggatggtcttgatctcctgacctcgtgatctgttcacctgggcctcccaaagtgctgggattacaagcatgagccactgcacctggccaggatttctaaaattctaaaatgtctatgtgctatctatcataattacttgttttgttttgttttgagacagagttttgctcttgtcacccagattggagtgcaatggtgtgatctaggctcactgaagcctccagcttctgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacacctgccaccacacccagctaa---tttttttatttttagtagagacagggttttaccatgttggccaggcttgtctcaaactcctgacctcaggtgatccacctaccttggcctcccaaagagctgggattacaggcatgagccaccagagccaccacatccaccctaattatggttattaagttattgtagaccacagaaataaccaaatttcctcgtcaattgtctttaactataactatttaaagtcatttccacagttaattgcttaatggtgatgcagtttctaaaaacttcacaagcatgcaaaatgctaaaatatggtgtctattagaagattcacgaaagaatgaaaaggaccctgaaaaacactcgtgaacacaggtttctaataactttaatatcataagtaaaaattctccataagttccccaattccccaagaattggactagttgagaattctcaaaagttaggctgggtgcagtggttcatgttggtaatcccagcactttgggaggccaaggccagtggatcacttgaggtcaggagtttgaggccagcctggccaaaggtgaaatcctgcctctactaaaaatataaaaattagctgggcgtggtggtatgcacctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaaccaaggaggcagaggttgcagtgagccaagatcatgccactgcactccaacctaggtaacagagtgagactctatctgaaaaaaagaaagaaTT---------CCCAaactttaataaaaagaccaactggtttataaaactgctaacccaagtagaagaaaaattgaataccaaggaaatattttgccaggtttgcatgctaaatcagccagtactgaaattgtttagatatataatttaaatagactccatggtctaagtcaaattacctataactcatcccttactagtgccatgcacctaacttggagaaacagctggtattcaagaggatgtaagtctaatgttaattaagcacgtacttatgaagaaccaggatggccaccttgtccttcttaagtccttaaagcttttgttactaaaaaatctgcattccataactcatcatagaaaagagaaaatgatacaaattaaatatattagtgtggtgatttctaaattgctaaaacagtttataaccaatgtttagtttgtcaaacctatattcctaggaaaactatcaaaacttcaggtacatttggttacctgatgggccatttaaacgttttataaagggatttcattcagttgtcattttcagtgcatgttttctgattatataaaagctcttccatgcaagagggttgatgttaaaacagtagattattacactgcagtgtattttcaccagctaaagaaagacttttatggttcactgaggacagtcaatcccttcacaatgtagaatctgatgactggatcttctgagaacatcagagaaggactgtccttgtcatccacatgacagcaaaactttaaaaccttaaactttgggttcatagtctcacaactcagaagggtccctccacactcagaactgtatacacattggaacacttaaggtaaagctaatcaggacag-tttcaccccagaagaagatggcatccttaatgtgaacagcttttcccaagatcacagatcaagacttctctactatcatgagactcttatcttaagtatctgtgcagctgctaacacttatggcatatggagaaaacatcaggtattataaagtttcgattgtagggaattaacaaaaaaacccacttagttaagcaagtaaactctttatctaattcattctttaatctatttgattttaggtggtttgatttatggggaccctgagtaaggagcatatgccaaattcttggtgttatcctaatagtcataagagtatccctggggcactgtacttcctcaaatgttttaagagttcgcatgcagccatctctacaatgtcaaatggtatcttttcaactggaatgacaagagattaaaaaaaatgtgcaaccataaggacaccataacctatgagtgacatgctaaact-gaaacccaaaacaatgggagtgacgtgctaaaaccAGAAACCCAAAACAATGGGAGTGAGGTGCTAAAACCAGAACCCAAAACAATGGGAGTGAAGTGCTAAAACTGGAAACCCAAAACAATGGGAGTGACGTCCTAAAACCAGAATCCAAAACAGTGACAGTGACAGGCTAAACTAGAAACCCAAAACAATGG i nomLeu3.chr21_GL397661_2_random C 0 C 0 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42332160 4432 + 202140232 I a score=24686.000000 s hg38.chrUn_GL000218v1 92294 55 + 161147 GAGTGACATGCTAAACCAGAAACCCAAAACAATGGGAGTAACATGCTAAAACCAG s panTro4.chr3 77165052 55 + 202329955 GAGTGACATGCTAAAACCGGAACCCAAAACAATGGCAGTGACGTGATAAAACCAG i panTro4.chr3 C 0 I 829 s ponAbe2.chr3 42336592 54 + 202140232 gagtgacatgctaatccggaaacccaaaacaatgggagtgacgtgct-aaACCGG i ponAbe2.chr3 I 4432 C 0 s nomLeu3.chr21_GL397661_2_random 94407 55 - 139590 GAGTGACATGCTAAACCGGAAACCCAAAACAATGGGAGTGACATGCTAAAACCAG i nomLeu3.chr21_GL397661_2_random C 0 I 34 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=12801.000000 s hg38.chrUn_GL000218v1 92349 27 + 161147 AACCCAAAACAATGGGAGTGACGTGCT s panTro4.chr3 77165936 27 + 202329955 AACGCAAAACAATGGCAGTGACCTGCT i panTro4.chr3 I 829 C 0 s ponAbe2.chr3 42336646 27 + 202140232 AACCCAAAACAATGGGAGTGACCTGCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 94496 27 - 139590 AACCCAAAACAATGGGAGTGATGTGCT i nomLeu3.chr21_GL397661_2_random I 34 I 201 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=6301.000000 s hg38.chrUn_GL000218v1 92376 30 + 161147 AAAACCATTACCCAAAACAATGGgagtgat s panTro4.chr3 77165963 30 + 202329955 AAAACCGGAACCCAAAACAATGGGAGTGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42336673 30 + 202140232 AAAAGCAGATCCCAAAACAATGGgagtgac i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 94523 201 - 139590 I e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=9117.000000 s hg38.chrUn_GL000218v1 92406 21 + 161147 gtgctaaaccggaaacccaaa s panTro4.chr3 77165993 21 + 202329955 GTGCTAAAACCGGAACCCAAA i panTro4.chr3 C 0 I 1560 s ponAbe2.chr3 42336703 20 + 202140232 -tgctaaaccggaaacccaaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 94724 21 - 139590 ctgctaagccggaaacccaaa i nomLeu3.chr21_GL397661_2_random I 201 C 0 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=22923.000000 s hg38.chrUn_GL000218v1 92427 95 + 161147 acaatggtaactaagagtgaggctaaggccctacattttggtcacactctcaactaagtgagaacttgactgaaaaggagga---ttttttttttttt s ponAbe2.chr3 42336723 98 + 202140232 acaatggtaactaagagtggtgctaaggccctacgttttggtcacactctcaactaagtgagaacttgactaaaaaggaggaattttttttttttttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 94745 93 - 139590 acaatggtaactaagagtggtgctaaggccctacattttggtcatgctctcaactaagtgagaacttgactaaaaaggagga---ttttttttttt-- i nomLeu3.chr21_GL397661_2_random C 0 C 0 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e panTro4.chr3 77166014 1560 + 202329955 I a score=102939.000000 s hg38.chrUn_GL000218v1 92522 235 + 161147 ctgagacagagtcttgctctgtcccccagagtggagtgcagtggcatgatctcggctcactgcaagctctgcctcccgggttcaggccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccagcatgcttggctatttttttgtgtatttagtagagatgaggtttcaccgtattagcaaggatggtctcaatctcctgatctcgtgatctgcccacctc s panTro4.chr3 77167574 229 + 202329955 ctgagatagagtcttgctctgtcccc-ag-gtggagtgcagtggcaagatcttggctcattgcaagttccgcctcctgggttcaggccattct---gcctcagcctcccaagtagctgggactacaggtgcccaccaccacgctcggctaattttt-gtattttcagtagagacggggtttcaccgtattagccaggacggtctcaatctcctgaccttgtgatccacccacctc i panTro4.chr3 I 1560 C 0 s ponAbe2.chr3 42336821 235 + 202140232 ttgagacagagtctcgctctgtcccccagactggagtgcagtggcatgatctcacctcactgcaacctctgcctcccaggttcacaccattctcctgcctcagcctcccaagtagctgggactacaggcatctgccaccacgcctggctaattttttctatttttagtagagacggggtttcaccatgttagccaggatggtctcaatctcctgaccctgtgatccgcctgcctc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 94838 234 - 139590 -tgagacagagtcttgctctgtcccccagagtggagtgcagtgacatgatctcagctcactgcaacatctgcctcccaggttcacaccattctcctgcctcagcctccctagtagctgggactacaggtgtctgccaccacgcttggctaattttttgtatctttaatagagatggggtttcaccgtattagccaggatggtctcaatctcctgaccttgtgatccacacgccgc i nomLeu3.chr21_GL397661_2_random C 0 C 0 e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=173819.000000 s hg38.chrUn_GL000218v1 92757 681 + 161147 ggcctcccaaagtgctgggattacaggcatgagccaccgtgcccagccaaaaggaggaattttttaagcaaaattatgggaggccattgttttgaactaagctcatgcaataggtcccaacagaacaaaccaaaccaaaatggagtcactcatgttaaatggaacataatcaaactaagactttaaggaaacacataaatcctagaacaaaccaggttttgtttttctcctgtaaacaggatgttccagcataagaagacaccttctactcaagtccttgttccaccttttcaaatctcactgttctatttcccagtgggtttctaaaccaaataagtacatttgcaagggtaatagtgacaccagtgactgaagttttggccagtctctcaaaattgagaaaataaccaaagggaaggcattgttaaagtgaactaagtatgtcctgagaaggactccataattatatatatgagtccttgtggatgacctgcaacctaccttaataggtaaacaagaatgaaaacctaacttgagtgtatgcacctcaaacaacagctacatcttggtcaatcccaatggccaaacttcaaccactcaggcactgccaaatgttcaaactgtgctcaaacaaggcaaacgctgagttgtttctgtacctcacttccgatttcggtatgc s panTro4.chr3 77167803 681 + 202329955 ggcctcccaaagagctgggattacaggtgtgagccaccacgcccagccaaaaggaggaattttttaagcaaaattatgagaggccattgttttaaactaagctcatgcaataggttccaacagaccaaaccaaaccaaaatggagttactcatgctaaatgtaacataatcaaactaagactttagggaaacacataaatcctagaacaaaccaggttttgtttttctcctgtaaacaggacgttccagcataagaaggtaccttctactcaagtccttggtccaccttttcaaaactcactggtctatttcccagtgggtttctaaagcaagtaagtacatttgcaatggtaatagtgacaccagtgactgaagttttggccaatctctcaaaattgagaaaataaccacagggaaggaattgttaaagtgaactaagtatggcctgagaaggactccataattccatatatgagtccttgtggatgaactgcaacctaccttaataggtagacaagaatgaaaacctaacttgagagtatgcacctggaacaacagctgcgtcttggccaatcccagtggccaaacttcaaccactcaggcactgccaagtgttcaaactgtgttcaaacaaggcaaatgctgagttgtttctgtacctcacttctgatttcggtatgc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42337056 681 + 202140232 agcctcccaaagtgctgagattacaggagtgagccaccgtgaccagccaaaagaaggaattttttaagcaaaattatgagaggccattgttttgaactaagctcatgcaataggtcccaacagaccaaaccaaactaaaatggagtcactcatgctaaatgtaacataatcaaactaagactttaaggaaacacataaatcctagaacaaaccaggttttgtttttctcctgtaaacaggacgttccagcataagaaggtaccttctattcaagtccttgttccaccttttcaaaactcactggtctatttcccagtgggtttctaaaccaagtaagtacatttgcaatggtagtagtgacaccagtgactaaagttttggccaatctctcaaaattgagaaaataaccaaaggaaaggaattgttaaagtgaaataagtatggcctgagaaggactccataattctatatatgaatccttgtggatgaactgcaacctaccttaataggtagacaaaaatgaatacctaacttcagagtatgcacctggaacaacagctgcatcttggccaatcccaatggccagacttcaaccactcaggcactgtcacttgttcaaactgttttcaaacaaggcaaacgctgagttgtttctgtaccacacttctgatttcggtatgc i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35359364 5342 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=67332.000000 s hg38.chrUn_GL000218v1 93438 141 + 161147 cacttccc-------ttttgtctacaaatcttcttccaccacatgactgtgctggagtctctgtgaatctgctgtgattctggggactttccgattcatgaatcgtttattgctcaattaaactcctttaaagtttttcttttaacaG s panTro4.chr3 77168484 141 + 202329955 cacttccc-------ttttgtctataaatcttcttccaccacatgactgtgctggagtctctgtgaatctgctgtgtttctggggactctccgattcatgaatcgtttattgctcaactaaactcctttaaagtttttcttttaacaG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42337737 141 + 202140232 cacttccc-------ttttgcctataaatcttcttccaccacatgactgtgatggagtctctgtgaatctgctgtgattctggggactgtccaattcatgaatcatttattgctcaattaaactcctgtaaagtttttcttttaacaG i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35364706 147 + 155834243 cacttccctttttttttttgtctataaatctttctccaccacacgactggactggagtctctctg-atctgctgtgattctgggggctgtccgatttgtgaatcatttattgctcaattaaacccctttaaagtttttcttttaacaG i calJac3.chr7 I 5342 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=38677.000000 s hg38.chrUn_GL000218v1 93579 37 + 161147 AACTAACACGGAAGAATTTCCAG-------ATCATGAACAGATG s panTro4.chr3 77168625 37 + 202329955 AACTAACACAGAAGAATTTCCAG-------ATCATGAACAGACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42337878 37 + 202140232 AACTAACACAGAAGAATTTCCAG-------ATCATGAACAGACA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41229 43 - 87690 AACTAACACAGAAGAATTTCCAGGAGAAAAATCATGAAC-GATA i macFas5.chr5_KE145639_random N 0 C 0 s papAnu2.JH684932 21024 43 + 231459 AACTAACACAGAAGAATTTCCAGGAGAAAAATCATGAAT-GATA i papAnu2.JH684932 N 0 C 0 s calJac3.chr7 35364853 40 + 155834243 AACTAACACAGAAGAATTTTCAGGAG----ATCATAAACAGACA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=6375.000000 s hg38.chrUn_GL000218v1 93616 11 + 161147 TTTTATAATAC s panTro4.chr3 77168662 11 + 202329955 TTTtgtaatac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42337915 11 + 202140232 TTTtgtaatac i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41272 11 - 87690 ATTTGAAATGc i macFas5.chr5_KE145639_random C 0 I 363 s papAnu2.JH684932 21067 11 + 231459 ATTTGAAATGC i papAnu2.JH684932 C 0 I 363 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35364893 0 + 155834243 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=147437.000000 s hg38.chrUn_GL000218v1 93627 599 + 161147 CCAACGTTGTATTAACATGAATAGACTCTTCCTTAgatagctaaccttgtttttaatatgaatagactctcccttagctgagaaaaccagacaaactccatttggctccttcatttacaagacatcaagggctccttacccaccccctttcctcaaggactttaacttgtgcaagctgattttcaacatatcaaagagtgcaattaactgataaagtgctgaggcaagtgatgtccgcagttcccagcaaattactcagagataatatcataaagcccccacatttgtctggaagataatgcccagagccccctcactcatcactttgtggtgaatttaaagcctctgcacctggaacagtttgttttcctgtaaccatctgtctttttaagttttttgtctgttttttcttctgtaagtttattgcagctggaatcccccctcccctctctaaaccaatgtataaaagaaaatctagcccattctttagggccgagagtatttcctgtgttagccgtctctcagtcaccagctaataaaggactcctgaattcgtctcaaagtgtggcatttctctgtaactcgtttgggtacgacaG s panTro4.chr3 77168673 598 + 202329955 ccaaagttgtgttaacatgaatagactcttccttagatacctaaccttatttttaatatgaatagactctcccttagctgagaaaaccggacaaactccatttggctccttcatttacaagacatcaagggctccttacccactccttttcctcaaggactttaacttgtgcaagctgactttcaacatatcaaagactgcaattaactgataa-gcgctgaggcaagcgatgtctgcagttcccagcaatttactcagagatagtatcataaagcccgcacatttgtccggcagctaacgcccagagccccctcacctatcactttgtggtgaatttaaagcccctgcaccgggaacagtttgttttcctgtaaccatctgtctttttaacttttttgtctgttttttcttctgtaaagttgctgcagctagaatcccccctcccctttctaaaccaaagtataaaagaaaatctagcctcttctccggggccgagagaatttcgtgcgttagccgtctcacagtcgccggctaataaaggactcctgaattcgtctcaaagtgtggcgtttctctctaactcgctcggatacgacaG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42337926 599 + 202140232 ccaatcttgcattaacatgaatagactcttccttagatacctaaccttgtttttaatatgaatagactctcccttagctgagaaaaccggacaaactccatttggctccttcatttacaagacatcaagggctccttacccaccccctttcctccaggactttaacttttgcaagctgactttcaacatatcaaagagtgccattaactgataaagtgctgaggcaagccacgtccacagttcccagcaatttacttggagacagtaccacaaagcccccacatttgtctggcagataacgcccagagccccctcacctatcactttgtgatgaatttaaagcccctgcacctggaacagtttgtttttctgtaaccatctgtctttttaacttttttgtctgttttttcttctgtaaagttgctgcagctagaatcccccctcccctctctaaaccaaagtataaaagaaaatctagtcccttctttggggccaagagaattttgtgcattagccgtctctcagtcgccggctaataaaggactcctgaattcgtctcaaagtgtggtgtttctctctaactcacttgCGTACGAGAG i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35364893 0 + 155834243 C e papAnu2.JH684932 21078 363 + 231459 I e macFas5.chr5_KE145639_random 41283 363 - 87690 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=3930.000000 s hg38.chrUn_GL000218v1 94226 7 + 161147 TTTCAAC s panTro4.chr3 77169271 7 + 202329955 TTTCAAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338525 7 + 202140232 TTTCAAC i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35364893 7 + 155834243 TTTCAAC i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e papAnu2.JH684932 21078 363 + 231459 I e macFas5.chr5_KE145639_random 41283 363 - 87690 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=293919.000000 s hg38.chrUn_GL000218v1 94233 303 + 161147 TATGGTAGAAGACTCGAGTAAGACAAAT--------ACAGCCCCCCTAAATTTGACTATTATTTAGGTTAATGGTGAGT-TTAGAAGAAATAAGTTAAGACTACACAGAGTGGGCTAAATTGCAAATAAACACTGAAAATATttcccagaaaatgtgactttgaacaggctgctgcacaccctgcatgtagagataaactaagaaaaatgtgtggagagttatttaaggacctgtggttaactcagtcctcaagatgttctgggtttcatccatgagtcaaggaggacctcccaaaagctgtttgggaccac s panTro4.chr3 77169278 303 + 202329955 TATGGTAGAAGACTCGAGTAAGGCAAAC--------ACAGTCCCCCTAAATTTGACTATTATTTAGGTTAATGGTGAGT-TTAGAAGAAATAAGTTAGGACTACACAGAGTGGGCTAAAGTGCAAATAAACACTGGAAGTATttcccagaaaatatcactttgaacaggctgctgcacaccctgcatgtagagataaactaagataaaggtgtggagagttatttaaggatctgtggttaactcagttctcaagatgttccgggtttcatccatgaatcaaggaggacctcccaaaagctgtttgggaccac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338532 303 + 202140232 TATGGTAGAAGACTCGAGTAAGGCAAAT--------ACAGTCCCCCTAAATTTGACTATTATTTAGGTTAATGGTGAGT-TTAGAAGAAATAAGTTAAGACTACACAGAGTGGGCTAAAGTGCAAATAAAcactggaaatatttcccagaaaatataactttgaacaggccgctgcacaccttgcacgtagagataaactaagaaaaaggtgtgaagagttatttaaggacctgtggttaactcagtcttcaagatgttctgggtttcatgcatgaatcaaggaggacctcccaaaagctgtttaggaccac i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41646 304 - 87690 TATGGCACAAGATTCAAGTAAGGCAGAC--TAGAGAATAG--CCAATGGATTTGCATATAATTTAGGTTAATGGTGAGCATCAGAATAAATGAATTAAGACTACACTGAATG----AAAGCGCAAGTGAGCAGTGGaaatatttgtcagaaaatacaactgtgaacaatctgctacaaattctccatgtacagatgaattgacagaaacatatggggggttagttaaggacctgtggtcaactcaatcctccagatgttctaggttttagccatgaatcaagtagggccttccaaaagctgtctgagatcac i macFas5.chr5_KE145639_random I 363 C 0 s papAnu2.JH684932 21441 304 + 231459 TATGGCACAAGATTCATGTAAGGCAGAC--TAGAGAATAG--CCAATGGATTTGCATATAATTTAGGTTAATGGTGAGCATCAGAATAAACGAATTAAGACTACACTGAATG----AAAGCGCAAGTGAGCAGTGGAAATATTTGTCAGAAAATACAACTGTGAACAATCTGCTACAAATTCTCCATGTacagatgaattgacagaaacaTATGGGGGGTTAGTTAAGGACCTGTGGTCAACTCAATCCTCCAGATGTTCTAGGTTTTAGCCATGAATCAAGTAGGGCCTTCCAAAAGCTGTCTGAGATCAC i papAnu2.JH684932 I 363 C 0 s calJac3.chr7 35364900 304 + 155834243 TATAGTAGAAGATTTGAGTAAGGCAAACATTAGAGAACAC--TCCCTAAATTTGACTATTATTTAGGTTAATGGTGAGT-GCAGAAGAAG-----TAAGACTACATAGAGTGGGCTAAAGTACAAATAAACACTGGGAgtatttcccagaaaatgtaactttgaacaggctgttgcacaccctgcatgtagagataaactaagaaaaatgcgtggagacttacttaagaacctgctgtcaactcaatctgcaagatgttccaagtttcatccatgaatcaaggagagcctcccaaaagctgtttgggaccac i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=19756.000000 s hg38.chrUn_GL000218v1 94536 34 + 161147 actctttgagcAA----GGAGCATACCTTATGATGGAA- s panTro4.chr3 77169581 34 + 202329955 actctttgagcAA----GGAGCATACCTTACGATGGAA- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338835 34 + 202140232 actctttgagcAA----GGAGCATACCTTACGATAGAA- i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41950 37 - 87690 actgtttcagcaactccagaaaa-acctcattacggga- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 21745 37 + 231459 ACAGTTTCAGCAACTCCAGAAAA-ACCTCATTACGGGA- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365204 32 + 155834243 ac--tCTGAGCAA----GGAGTAACCCTTATCATGGAA- i calJac3.chr7 C 0 C 0 s micMur1.scaffold_7212 4695 38 + 80670 acaactttagcaactccagaaaa-accttagtaattgat i micMur1.scaffold_7212 N 0 N 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=4808.000000 s hg38.chrUn_GL000218v1 94570 4 + 161147 GCTG s panTro4.chr3 77169615 4 + 202329955 GCTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338869 4 + 202140232 GCTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41987 4 - 87690 gttg i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 21782 4 + 231459 GTTG i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365236 4 + 155834243 GCTG i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=9733.000000 s hg38.chrUn_GL000218v1 94574 21 + 161147 TGCTTTAGCAGGAGATGACCA s panTro4.chr3 77169619 21 + 202329955 TGCTTTAGCAGCAGATGACCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338873 21 + 202140232 TGCTTTAGCAGCAGATGACCA i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35365240 21 + 155834243 TGCTGCAGCAGTAGGTGACCA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e papAnu2.JH684932 21786 0 + 231459 C e macFas5.chr5_KE145639_random 41991 0 - 87690 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=30203.000000 s hg38.chrUn_GL000218v1 94595 147 + 161147 TTTCCACTGCACAACACGCCGTGCTTTAGCAGACGATGACCATTTCCACTGTACAACAT----------------------------------------------------------------------GCTGTGCTTTAGCGTCAGATGACCATTTCCACTGCACAACACGCCATGCTTTAGCGGAAAATGACCATTTCCACTGCACAACACGCCA s panTro4.chr3 77169640 217 + 202329955 TTTCCACTGCACAACATGCTGTGCTTTAGCGGAAGATGACTGTTTCCACTGCACAACACTACAAGTGTTTACTGCCAGGCTGGTGTGAAATATGTTCCACCACAGCAAGGAGCATACCTTATGATGGAAGCTGTGCTTTAGCGGCAGATGACCATTTCCACTGCACAACACACTGTGCTTTAGCGGCAGATGACCATTTCCACTGCACAACACGCCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42338894 147 + 202140232 TTTCCACTGCACAACACGCTGTGCTTTAACGGAAGATGACCGCTTCCACTGCACAGCAC----------------------------------------------------------------------GCCGTGCTTTAGCGGAAGATGACCGTTTCCACTGCACAGCACGCCGTGCTTTAGCGGAAGATGACCGCTTCCACTGCACAACACGCTG i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35365261 0 + 155834243 C e papAnu2.JH684932 21786 0 + 231459 C e macFas5.chr5_KE145639_random 41991 0 - 87690 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=12795.000000 s hg38.chrUn_GL000218v1 94742 21 + 161147 TGCCTTAGCGGAAGATGACTG s panTro4.chr3 77169857 21 + 202329955 TGCTTTAGCGGAAGATGACCG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339041 21 + 202140232 TGCTTTAGCAGCAGATGACCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 41991 21 - 87690 tgctttagcactaAGTGACTA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 21786 21 + 231459 TGCTTTAGCACTAAGTGACTA i papAnu2.JH684932 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35365261 0 + 155834243 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=356421.000000 s hg38.chrUn_GL000218v1 94763 402 + 161147 TTTCCACTGCACAACACTACAAGTGCTTACTGCCAGACCGGTGT--GAAATATGTTCCAGCACATAATCTATGTCACCAATGAAGGTGGTGGttaagac-ttggtgcacacaagctttcctgtcccacaagaacacagcatgctctcttttcgggttccattccaatcacgtaacaaacatgactgccttttttgtttcggcatcagaaagatcagaggaaactttgcactcaacttagacaactctaagcttttataacctgtctatATCTACAGGTCAGCTTTATCTTA-TTTATGTATATTTCCTTCAACCTGAGTTTTACTTATTTCCACTTTTCCT-TTTTAATTCACAGACACCCATAAACTCAGAAAATACAGTGTAAAACAAAGTGAAGAACAAATAAA s panTro4.chr3 77169878 403 + 202329955 TTTCCACTGCACAACACTACAAGTATTTACTGCCAGGCCGGTGT--GAAATATGTTCCAGCACATAACCTATGTCACCACTGAAGGTGGTGGTTCAGAC-TTGGTGCACGCAAGCTTTCCTGTCCCACAAGAACACAGCATGCTCTCTTCTCGGGTTCCATTCCAATCACGTAACAACCATGACTGCCTTTTTTGTCACTGCATCAGAAAGATCAGAGGAAAATTTGCACTCAACTTAGACAACTCTAAGCTCTTATAACCTGTCTATATCTACAGGTCAGCTTTATCTTAATTTATGTATATTTCCTTCAACCTGAGTTTTACTTATTTCCACTTTTCCT-TTTTAATTCACAGACACCCATAAACTCAGAAAACACAGTGTAAAACAAAGTGAAGAAAAAATAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339062 402 + 202140232 TTTCCACTGCACAACACTAAAAGTGTTTACTGCCAGGCCGCTGT--GAAATATGTTCCAGCACATAATCTATGTCACCAATGAAGGTGGTGGTTCAGAC-TTGGTGCACACaagctttcctgtcccacaagaacacagcatgctctcttctcgggttccattccaatcacgtaacaaacatgactgccttttttgtcgcagcatcagaaagatcaaaggaaaatttgcactcaatttagacaactctaagctcttataacctgcctatATCTACAGGTCAGCTTTATCTTA-TTTATGTATATTTCCTTCAAGCTGAGTTTTACTTATTTCTACTTTTCCC-TTTTAATTCACAGACACCCACAAACTCAGAAAATACAGTGTAAAACAAAGTGAAGAACACATAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42012 393 - 87690 TTTCTACTGCAAAATGCTAATAGTGTTTATTTCCAGGTTGGTAGTAAAAAAACTTTTCACTACATCATCTCTGTGACCAATGCAGTCAATGTTCCAGACTTTAGTGACAGCAAGTCTTCCCGTCCCACGAGAATGTAGC--GCGTACTTTCCAGGTTCCATTCCAATCACGTAACAAATGTGACTGCC-TTGTTGTTGCAGCATCAGAAAGACCAGAGACATACCTGTACTCACGTTCCATGGC---------TTACAACCTGCATATGTCTACAAGCCAGCATTCTTTTA-TTTATGTGCATTTCCTTTAACCTGAATTTTACTTATTTCTATTTTTTTCATTTTAATCCATGGAC-TCCATAAAGGTAAAAAATGCAATGTAAAACAAAGTGAGGAATATATAAA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 21807 393 + 231459 TTTCTACTGCAAAATGCTAATAGTGTTTATTTCCAGGTTGGTAGTaaaaaaaCTTTTCACTACATCATCTCTGTGACCAATGCAGTCAATGTTCCAGACTTTAGTGACAGCAAGTCTTCCCGTCCCATGAGAATGTAGC--GCGTACTTTCCAGGTTCCATTCCAATCACGTAACAAATGTGACTGCC-TTGTTGTTGCAGCATCAGAAAGACCAGAGACATACCTGTACTCACGTTCCATGGC---------TTACAACCTGCATATGTCTACAAGCCagcattctttta-tttatgtgcatttcctttaacctgaattttacttatttctatttttttcattttaatccatGGAC-TCCATAAAGGTAAAAAATGCAATGTAAAACAAAGTGaggaatatataaa i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365261 396 + 155834243 CTTCCACTACACAACATTAA-AGTGTTTACTGCCAGGTTGGTGGT-GAAATATGCCCCACCACATAATCTGTGTCACGAAAGAAGGTGCTGGTTCAGAC-TTGGTACA-GCCAGTTCTCCTGTCCCACGAGAACGCAGCATGCTCTCTTCTCAGGTTCCACTCCAATCATGTAATA--CATGACTGc--tttttgccatggcatcagaaagaccagagaaaaatatgtactcaacgaagacaactctaagcacttataatctgcctatAACTACAGGTCAGCTTTACCTTA-TTTATGTACACTTCCTTCAAGCTGAGTTTCACTTATTTCCACTTTCCCA-TTTTAATTCACATAC-CCCATAAATTCAGAAAATACAACGTAAAACAAAGTGAAGAACAAATAGA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=-2330.000000 s hg38.chrUn_GL000218v1 95165 1 + 161147 -A s panTro4.chr3 77170281 1 + 202329955 -C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339464 1 + 202140232 -C i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42405 1 - 87690 -C i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22200 1 + 231459 -c i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365657 1 + 155834243 -C i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 35235 1 + 1077187 A- i otoGar3.GL873804 N 0 I 164 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=84445.000000 s hg38.chrUn_GL000218v1 95166 76 + 161147 ----AACTCACCAGAGATTTATTCGTTTCTTGTTGCTCTTGGAAACACCCAGAGGACACTGGAAACATAGCTGGAAGAGA s panTro4.chr3 77170282 76 + 202329955 ----AACTCACCAGAGATTTATTCGTTTCTTGTAGCTCTTGGAAACACCCAGAGGACACTGGAAACATAGCTGGGAGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339465 76 + 202140232 ----AACTCACCAGAGATTTATTCATTTCTTGTTGCTCTTGAAAACACCCAGAGGACACTGGAAACATAGCTGGGAGAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42406 80 - 87690 AAATAACTCACCAGAGATTTATTCACTGTTTGTTGATTGTGGAAACGCACAGAGCACTCTGGAAGCATAGCTGGGAGAAC i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22201 80 + 231459 aaataactcACCAGAGATTTATTCACTGTTTGTTGATTGTGGAAACGCACAGAGCACTCTGGAAGCATAGCTGGGAGAAC i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365658 76 + 155834243 ----AACTCACCAGAGATTTATGCACTTTTTGTTGCTCTTGGAAACACCCAGAGGACACTGGAAACACAGCTGGGAGAGA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 860177 2949 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35236 164 + 1077187 I a score=9120.000000 s hg38.chrUn_GL000218v1 95242 7 + 161147 AGGCAAA s panTro4.chr3 77170358 7 + 202329955 AGGCAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339541 7 + 202140232 AGGCAAA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42486 7 - 87690 AGTCGAA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22281 7 + 231459 AGTCGAA i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365734 7 + 155834243 AGGCAAA i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 863126 7 - 1133132 GGGCAGA i tarSyr2.KE941085v1 I 2949 I 2283 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35236 164 + 1077187 I a score=83615.000000 s hg38.chrUn_GL000218v1 95249 81 + 161147 TGATGTCGATTAAGGAGAGAACTGGTGAGGTGTGGTCCCAGATTCTTCTGCCCAACACTCTAGACACATTACCTGGAAAAG s panTro4.chr3 77170365 81 + 202329955 TGACGTGAATTAAGGAGAGAACTGGTGTGGTGTGGTCCCAGATTCTTCTGCCCAACACTCTAGACACATTACCTGGAAAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339548 81 + 202140232 TGACGTGGATTAAGGAGAGAACTGGTGTGGTGTGGTCCCAGATTCTTCTGCCCAACACTCTAGACACATTACCTGGAAAAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42493 81 - 87690 TGGAGTGGGTTAAGGAGAGAACTGGTGTGGCTTTGTCCTAGATTCTCCTGCCCAAAATGCTCTACACAATAGCTGGAAAAG i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22288 81 + 231459 TGGAGTGGGTTAAGGAGAGAACTGGTGTGGCTTGGTCCTAGATTCTCCTGCCCAAAATGCTCTACACAATAGCTGGAAAag i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365741 76 + 155834243 TGACGCGGATTAAGGAGAGAAATGGTA-----TGGTCCCAGATTCTTCTGCCCCACACTCCAGACACATTACCTGGAAAAG i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35236 164 + 1077187 I a score=5924.000000 s hg38.chrUn_GL000218v1 95330 26 + 161147 CCCTCCTCCCTCCGGAAAAAGAAAAA- s panTro4.chr3 77170446 26 + 202329955 CCCTCCTCCCTCCTGAAAAAGAAAAA- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339629 26 + 202140232 CCCTCCTACCTCCTGAAAAAGAAAAA- i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42574 18 - 87690 --------ACTAAAACAACAACAAAA- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22369 18 + 231459 --------actaaaacaacaacaaaa- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365817 23 + 155834243 ACCTCCTCCCTCCT---AAGAAAAAA- i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 35400 17 + 1077187 ----------ACAAGGAAAAACAAAAA i otoGar3.GL873804 I 164 I 4359 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=47476.000000 s hg38.chrUn_GL000218v1 95356 50 + 161147 CTTCCCCATGGGAGAAGAGTCCTTCACACCTC-ATTAGGGGCAGCAAAGAC s panTro4.chr3 77170472 50 + 202329955 CTTTCCCATGGGAGAAGAGTCCTTCAAGCCTC-ATTAGGGGCAGCAAAGAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339655 50 + 202140232 CTTCCCCGTGGGAGAAGAGTCCTTCACGCCTC-ATTAGGGGCAGCAAAGAC i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42592 51 - 87690 CCTCCCTGTGACAGAACAGTCATTCATGCCTCAATAAGGGACAACAAATAT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22387 51 + 231459 cctcccTGTGACAGAACAGTCATTCATGCCTCAATAAGGGACAACAAATAT i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35365840 50 + 155834243 CTTCCCAGTGGGAGAATAGTCCTTTACGCCTC-ATTAGGGGCAACAAAGAC i calJac3.chr7 C 0 I 450 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=54011.000000 s hg38.chrUn_GL000218v1 95406 79 + 161147 TCAAGTTAA---GATAAGATACATCTACAAGTACATTAATTGGTAGACATTAGATGCACAATTTATTTTTG----AATAAAAATAT s panTro4.chr3 77170522 73 + 202329955 TCAAG--------ATAAGATACATCTACAAGTACATTAATTGGTAGACATTAGATGCACAATTTATTTT-G----AATAAAAATAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339705 79 + 202140232 TCAAGTTAA---GATAAGATACATCTACAAGTACATTAATTGGTAGACATTAGATGCACaatttatttttg----aataaaaatat i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42643 75 - 87690 CCCAC--------TGAAGATGTACCCACAATTACATTAACTAGTAGAGAT---ACATACAATTTATTTTTGGATTAATGAAAACAT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22438 75 + 231459 CCCAC--------TGAAGATGTACCCACAAGTACATTAACTAGTAGAGat---acatacaatttatttttggaTTAATGAAAACAT i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35366340 82 + 155834243 ttaaaataaaaTAAAAAGTTACAGCTACAAGGATATTAACTGGTAGACATCAGATGCACAATTTATTTTTG----AATCGAAATAT i calJac3.chr7 I 450 I 309 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=1386.000000 s hg38.chrUn_GL000218v1 95485 2 + 161147 GT s panTro4.chr3 77170595 2 + 202329955 GT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339784 2 + 202140232 at i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42718 2 - 87690 GT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22513 2 + 231459 GT i papAnu2.JH684932 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35366422 309 + 155834243 I e tupBel1.scaffold_108778.1-206903 134423 2242 + 206903 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=315.000000 s hg38.chrUn_GL000218v1 95487 3 + 161147 -AGT s panTro4.chr3 77170597 3 + 202329955 -ATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339786 3 + 202140232 -att i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42720 3 - 87690 -ATT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22515 3 + 231459 -ATT i papAnu2.JH684932 C 0 C 0 s tupBel1.scaffold_108778.1-206903 136665 3 + 206903 CAT- i tupBel1.scaffold_108778.1-206903 I 2242 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35366422 309 + 155834243 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=1911.000000 s hg38.chrUn_GL000218v1 95490 1 + 161147 A s panTro4.chr3 77170600 1 + 202329955 A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339789 1 + 202140232 a i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42723 1 - 87690 A i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22518 1 + 231459 A i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35366731 1 + 155834243 A i calJac3.chr7 I 309 C 0 s tupBel1.scaffold_108778.1-206903 136668 1 + 206903 A i tupBel1.scaffold_108778.1-206903 C 0 N 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=378390.000000 s hg38.chrUn_GL000218v1 95491 473 + 161147 CCTACAAATTTAGTAACAAT---ATTACCTAAAGATATAATCTAATAATTTAATACAAAGAAACAT--TATAAG--TTCACTAAAATAAATGTTATAGAAATAT-ACTGGGCTGTATTAACTATTTTCCTATTAACATGTGGATTCCACAGATAACTTCTTATGAGTATTCCCATGACAGTACATCTTGCTTT-----------------------------------------------------------------TC-----TATACCTGAACATCATGGAAAG--TGCATCTTGCAACCCAGCAATTTTGGCCTACG------T--TTTTTAAAATGTACATAATATGTATTTCCtgcagtacaccgttctactcatgtttcccaataacacctttccctgtatccaagccctcat--attatgctctgacaataaattgggcttttccatctgacttg-tccagtgaatggacaatggaaaatgtgatgcaaataT-----------------------------CCATTGGTTCTTGCCTTTTTGGACACAGTCATATTGTGAAGAGGTCTGGAGCTACCCTGTTGG s panTro4.chr3 77170601 479 + 202329955 CCTACTAATTTAGCAACAAT---ATTACCTAAAGATATAATCTAATAATTTAATACAAAGAAACAT--GATAAG--TTCACTAAAATAAATGTTATAGAAATAT-ACTGGGCTGTATTAACTATTTTCCTATTAATATGTGGATTCCACAAATAACTTCATATGAGTGTTCCCATGACAGTACATCTTGCTTT-----------------------------------------------------------------TC-----TATACCTGAACATCATGGAAAG--TGCATCTTGCAACCCAGCAATTTTGGCCTACAATTACTT--TTTTTTAAATGTACATAATATGTATTTCCtgcagtacaccattctactcatgtttcccaataacacctttccctgtatccaagccctcat--attatgctctgacaataaattgggcttttccatctgacttg-tccagtgaatggacaatggaaaatgtgatgcaaatat-----------------------------ccattggttcttgcctttttggacacagtcatattgtgaggaggtctggagctaccctggtgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42339790 478 + 202140232 CCTACTAATTTAGCAACAAT---ATTACCTAAGGATATAATCTAATAATTTAATACAAAGAAACAT--TATAAG--TTCACTAAAATAAATGTTATAGAAATAT-ACTGGGCTGTATTAACTATTTTCATATTAATATGTGGATTTCACAAATAACTTCATATGAGTGTTCCCATGACAGTACATCTTGCTTT-----------------------------------------------------------------TC-----TATACCTGAACATCATGGATAG--TGCATCTTGCAACCCAGCAATTTTGGCCTACAATTACAT--TTTTTTAAATGTACATAATACGTATTTCCtgcagtacaccattctactcatgtttcccagtaacacttttccctgtat-caagccctcat--attacgccctgacaataaattgggcttttccatctgacttg-tccagtgaatggacaatggaaaatgtcacgcaaatat-----------------------------ccattggttcttgcctttttggacacagtcatattgtgaggaggtctggagctaccctgttgg i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 42724 539 - 87690 CCTACTGATTTAGGAACAATTAATTTGCCCAAAGAAACAATGTAATAATTTAAACCAAAGAAATATACACTTAGTCTTCAATGAAATTAATATTGTAGAAATATAATTCAGCCACATTAACTATTTCACTACTAATATGGAGATTCTAC--ACGATTCCACATAGGTGCTTCCACTAGAACACATCTTGCTTTTATACCTTTGCATCATTGAAAGAATGCATCTTTTATATACCTACGCATCATTGAAAGGATGCA--TCTTTTATATACCTATGCATCATTGAAAGGATGCATCTTGCAACCCAACATTTTTTGCCTACAATTATATAGGGGGGAAAATGTACATATTGTATATTTCTtgggatatactgttttagtaatgtttcctaatgacatgtgtccctgtatctcagacctcatagagtatgctctgataacgaacagggctctgccatttgacttgcttttgccaatgggacatggaaaatatgatgaaaatataggct----------ggaaaagtacttgcccactggtgcttgccttctcgga---------------------------------------- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 22519 539 + 231459 CCTACTGATTTAGGAACAATTAATTTGCCCAAAGAAACAATGTAATAATTTAAACCAAAGAAATATACACTTAGTCTTCAATGAAATTAATATTGTAGAAATATAATTCAGCCACATTAACTATTTCACTACTAATATGGAGATTCTAC--ACGATTCCATATAGGTGTTTCCACTAGAACACATCTTGCTTTTATACCTTTGCATCATTGAAAGGATGCATCTTTTATATACCTACGCATCATTGAAAGGAT--GCATCTTTTATATACCTACGCATCATTGAAAGGATGCATCTTGCAACCCAACATTTTTTGCCCACAATTATATAGGGGGGAAAATGTACATATTGTATATTTCTTGGGATATACTGTTTTAGTAATGTTTCCTAATGACATGTCTCCCTGTATCTCAGACCTCATAGAGTACGCTCTGATAACGAACAGGGCTCTGCCATTTGACTTGCTTTTGCCAATGGGACATggaaaatatgatgaaaatataGGCT----------GGAAAAGTACTTGCCCACTGGTGCTTGCCTTCTCGGA---------------------------------------- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35366732 495 + 155834243 CCTGCTGATTTAACAACAGT---ATTACCTAAAGATATAATCTAATAATTTAATACAAAGAAACAT--TATAAG--TTCACAAAAACAAATGTTATAGAAGTAT-ACTGGGCTGCATTAACTATTTTCCTATTAATACGTGGATTCCAC----AACTTCATATGAGTGTTTCCATGACAGTGCATCTTGCTTT-----------------------------------------------------------------TC-----CATACCTG---ATCATGAAAAGTTTGCATCTTGCAACCCAACAATTTTTGCCTACT------T--TTTTTTTAATGTACATAATATATATTTCCTGCAGTACAACATTCTACTCGTGTTTCCCAATAACACCTTTCCCTGTATCCAAGCCCTCAT--ATTATGCTCTGACAATGAATTGGGCTTTTCCATTTGACATG-TCCAATGAATGGACAATGAAAAATGTGAT-CAAATATAGGTTTGCGGTGAGCTGAAAAGTATTTGCCTACTGGTTCTTGCCTTTTTGGACATAGTCACATTGTGAAGAAGTTT-GAGCTACCCTGTTGG i calJac3.chr7 C 0 I 278 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=81994.000000 s hg38.chrUn_GL000218v1 95964 170 + 161147 AAACACAGGGCCTAGCCAAGAGTCACCAcaaaccaccagat-tgtgaaggaaactatcttaaaccaaccaggctcagtcaaggcaccaggtgactaaggcctgttttgtgatccaggcaacacaaatatatcaactacccagctgaacccaccacaccaaaatgcagatcc s panTro4.chr3 77171080 170 + 202329955 agacacagggcctagccaagagtcaccacaagccgccagat-tgtgaaggaaactatcttaaaccaaccaggctcagtcaaggcaccaggtgaccaaggcctcttttgtgatccaggcaacgtaaatatatcaactacccagctgaacccaccacaccaaaatgcagatcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340268 170 + 202140232 agacacagggcctagccaagagtcaccacaaaccgccagac-tgtgaaggaaactatcttcaaccaaccaggctcagtcaaggcaccaggtgaccaaggcctcttttgtgatccaggcaacacaaatatatcaactacacagctgaacccaccacaccaaaatgcagatcc i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 43263 123 - 87690 ----------------caagggtcagcatgaaccatcagacatgtg-----------------------------agtgaaggcaccagatgactaaagcctcatctgtgatccagacaacattagcaaaggaaatgcccaggtgaac---acacgccaaaatgtgaatca i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 23058 123 + 231459 ----------------CAAGGGTCAGCATGAACCATCAGACATGTG-----------------------------AGTGAAGGCACCAGATGACTAAAGCCTCATCTGTGATCCAGACAACATTAGCAAAGGAAATGCCCAGGTGAAC---ACACGCCAAAATGTGAATCA i papAnu2.JH684932 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e calJac3.chr7 35367227 278 + 155834243 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=166692.000000 s hg38.chrUn_GL000218v1 96134 187 + 161147 acagaacttcaaacaaataaaatggtggttgttttttataagctagtaaggtttaattagttccttaaacagcaaatattaactgttacaCCTAAGTGAATAGAATTCAATATGTTTTTAACGAAATTATGTAGGGGGAGAAAGTCTTAAATTACAAATGAAATGCAATCAATAGAACTTCACAATC s panTro4.chr3 77171250 187 + 202329955 acagaacttcaaacaaataaaatggtggttgttttttataagccagtaaggtttaattagttccttaaacagcaagtattaactgttacaCCTAAGTGAACAGAATTCAATATGTTTTTAACAAAATTACGTAGGGGGAGAAAGTCTTAAATTACAAATCAAATACAATCAACAGAACTTCACAATC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340438 185 + 202140232 acagaacttcgaacaaataaaatggtggttgttttttataagccagtaaggtttaattagttccttaaacagcaagtattaactgttacaCCTAAGCGAACAGAATTCA--ATGTTTTTAACAAAATTACATAAGGGGAGGAACTCTTAAATTACTAATCAAATACAATCAATAGAACTTCACAATC i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 43386 181 - 87690 acagaacttctatcaaataaaacggtcacttctttt--taagccagtga-gtttcattggttcttcagacagaaaatagtaactgatacaCCTAAGCCACCAGAACTCA--ATGTTTTTAAGAAAATCATGT-GAAGGAGATAATGTGAAATTACTTGTCAAGTACAATCACTAGAACATCACAACC i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 23181 181 + 231459 ACAGAACTTCTATCAAATAAAACGGTCACTTCTTTT--TAAGCCAGTGA-GTTTCGTTGGTTCTTCAGACAGAAAATAGTAACTGATACACCTAAGCCACCAGAACtca--atgtttttaagaaaatcatgT-GAAGGAGATAATGTGAAATTACTTGTCAAGTACAATCACTAGAACATCACAACC i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35367505 184 + 155834243 ACAGAATGTCAAACAAATAAAACAGTTGGTTTTTTT--TAAGTCATTAAGGTTTGATTATCTCCTTAAACAGCAAGTATTAACTGTTACACTTAAGCAAACAGAATTCAGTACGTTTTAAACAAAATTATGT-TGGGGAGAAAATCTTCAAGTACAAGTCAAATACAATCAATAGAACTTCACACTC i calJac3.chr7 I 278 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 35417 4359 + 1077187 I a score=1911.000000 s hg38.chrUn_GL000218v1 96321 1 + 161147 T s panTro4.chr3 77171437 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340623 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 43567 1 - 87690 T i macFas5.chr5_KE145639_random C 0 I 1349 s papAnu2.JH684932 23362 1 + 231459 T i papAnu2.JH684932 C 0 I 1160 s calJac3.chr7 35367689 1 + 155834243 T i calJac3.chr7 C 0 I 1275 s otoGar3.GL873804 39776 1 + 1077187 T i otoGar3.GL873804 I 4359 I 90 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=4459.000000 s hg38.chrUn_GL000218v1 96322 16 + 161147 AT-------GCTAAATTTGGTGA s panTro4.chr3 77171438 23 + 202329955 AATGCTAAAGCTAAATTTGGTGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340624 17 + 202140232 AAT------GCTAAATTTGGTGA i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35368965 16 + 155834243 -------ATGCCAAATCTGGTGA i calJac3.chr7 I 1275 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e papAnu2.JH684932 23363 1160 + 231459 I e macFas5.chr5_KE145639_random 43568 1349 - 87690 I e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39777 90 + 1077187 I a score=63502.000000 s hg38.chrUn_GL000218v1 96338 74 + 161147 TGGACTAGGTTTAATATATCTCAGACACTGGAAACAACAAGCTAAGTTTGAAGGAATGGGACTGTATTTGGAGA s panTro4.chr3 77171461 74 + 202329955 TGGACTAGGTTTAATATACCTCAAACGCTGGAAACAACGAGGAAAGGCTGAAGGAATGGGACCGTGTTTGGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340641 71 + 202140232 TGGACTAGGTTTAATGTATCTCAGACGCTGGAAACAACGAGCTAAG---GAAGGAATGGGACTGTGTTTGGAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 44917 74 - 87690 tAGACTACTTTTAAGAAAGTTCAGCCACTGGAAACAATGAGAAAAGATTGAACGAATTAAAGTGTGTTTACAGA i macFas5.chr5_KE145639_random I 1349 C 0 s papAnu2.JH684932 24523 74 + 231459 tagACTACTTTTAAGAAAGTTCAGCCACTGGAAACAATGAGAAAAGATTGAACGAATTAAAGTGTGTTTACAGA i papAnu2.JH684932 I 1160 C 0 s calJac3.chr7 35368981 74 + 155834243 CAGACCAGGTTTAAGATAGCTCAGACACTGGAAACGACTAGTTAAGATTGAAGGAATGAGACTGTGTTTAGAGA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39777 90 + 1077187 I a score=4543.000000 s hg38.chrUn_GL000218v1 96412 5 + 161147 GTATT s panTro4.chr3 77171535 5 + 202329955 GTATT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340712 5 + 202140232 GTATT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 44991 5 - 87690 GTACT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24597 5 + 231459 GCACT i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369055 5 + 155834243 GTACT i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 39867 5 + 1077187 CCCCT i otoGar3.GL873804 I 90 I 581 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=151674.000000 s hg38.chrUn_GL000218v1 96417 164 + 161147 TC-----AATCTTTTCAAGTATGACAGGTCACTCCTGCACCCCAGACCACACTTTCAGGCCCCTTCAAA-TAAGGAATATTTCCTAGGT-CCTTGCCTGTTCTTCTCAGCTGAATTCACCTCAACCTTCTGAAAGTTCTTCCAAACCTTCCACTATCACCTAGTCTTTGCA s panTro4.chr3 77171540 164 + 202329955 TT-----AATCTTCTCAGGTATGACAGGTCACTCCTGTACCCCAGACCACACTTTCAGGCCCCTTCAAA-TAAGGAATATTTCCTAGGT-CCTTGCCTGTTCTTCTCAGCCGAATTCACCTCAACCTTCTGAAAGTTCGTCCAAACCTTCCACTGTCACCTAGTCTTTGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340717 164 + 202140232 TT-----AATCTTCTCAGGTATGACAGATCACTCCTGAACCCCAGACCACACTTTCAGGCCCCTTCAAA-TAAGGAATATTTCCTAGGT-CCTTGCCTGTTCTTCTCAGCCGAATTCACCTCAACCTTCTGAAAGTTCGTCCAAACCTTCCACTACCACCTAGTCTTTGCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 44996 169 - 87690 CCACACAAATCCTCTCAGGTATAACAGGTTATTTTTCCACTCAGGACAACACTATTAAGTCCCCTCCAG-TAAGTAACATCTCTTTGGC-CCTTGCCTGTCACCCGCAGCCAAACTCCCCTCTTCCTTCTCAATGTTGGTCCAAACCTTCCGCTACCACCCAGCATTTGAG i macFas5.chr5_KE145639_random C 0 I 27 s papAnu2.JH684932 24602 169 + 231459 CCAGACAAATCCTCTCAGGTATAACAGGTTATTTTTCCACCCAGGACAACACTATTAAGTCCCCTCCAG-TAAGTAACATCTCTTTGGC-CCTTGCCTGTCACCCGCAGCCAAACTCCCCTCTTCCTTCTGAATGTTGGTTCAAACCTTCCGCTACCACCCAGTATTTGAG i papAnu2.JH684932 C 0 I 27 s calJac3.chr7 35369060 171 + 155834243 TCAGAGAAATCTTCTCAGATATATCAGGTTACTCGTGCACCACAGACCACACTTTCAAGTCCCTTCCAATTAAGTAGTATTTTCTAGGTGCCATGCCTGTTCGTCTCAGCCGAATTCACCTCATCTTTCTGAAAGTTCATCCCAACCTTCCACTATCACCCAGTCTTTGCA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=5733.000000 s hg38.chrUn_GL000218v1 96581 3 + 161147 AAT s panTro4.chr3 77171704 3 + 202329955 AAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340881 3 + 202140232 AAT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45192 3 - 87690 AAT i macFas5.chr5_KE145639_random I 27 C 0 s papAnu2.JH684932 24798 3 + 231459 AAT i papAnu2.JH684932 I 27 C 0 s nasLar1.chr9 121381709 3 + 124503471 AAT i nasLar1.chr9 N 0 N 0 s calJac3.chr7 35369231 3 + 155834243 AAT i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=135118.000000 s hg38.chrUn_GL000218v1 96584 178 + 161147 CTTGTGCATTCTAGGGAGTAGAATTAATATTTCCTGAGCGAGGAAAACTGGGATCTTCACCTGCGACC---TTTTATCCTCCTCTGAAGCACCAGTGAGA-AGTTAGACCAGAGGGCTGTTCTTTCAAGTGCGCCTCTTATTCATAGGGAACCCTCCCTTTCAAACTTTATAACACACAGTG s panTro4.chr3 77171707 178 + 202329955 CTTGTGCATTCTAGGGAGTAGAATTAATATTTCCCGAGCGAGGAAAACTGAGATCTTCACCTGTGACC---TTTTATCCTCCTCTGAAGCACCAGTGAGA-GGTTAGACCAGAGGGCTGTTCTTTCAAGTGCGCTTCTTATTCATAGGGAACCCTCCCTTTCAAACTTTATAACACACGGTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42340884 180 + 202140232 CTCGTGCATTCTAGGGAGTAGAATTAATATTTCCTGAGCGAGGAAAACTGGGATCTTCACCTGTGACCC-TTTTTTTCCTCCTCTGAAGCACCAGTGAGA-GGTTAGACCAGAGGGCTGTTCTTTCAAGTGCGCTTCTTATTCATAGGGAACCCTCCCCTTCAAACTTTATAACACACGCTT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45195 168 - 87690 CTGGACCACTCCGGGGAGTGGGAAAATAACTGCTTGGGTCATACAAACTGGAATCTTCGCCTGTGACA----CTTCCCCTGCTTTGAAGCACCAGTGAGACGGTTAGTCCAGAGAGGTGTTCTTTTAGGTGGG------ATTCCTAAAAGGCGCCCTCCTCCAAACTTTATTATAAA----G i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24801 168 + 231459 CTGGACCACTCTGGGGAGTGGGAAAATAACTGCTTGGGTCATACAAACTGGAATCTTCGCCTGTGACA----CTTCCCCTGCTTTGAAGCACCAGTGAGAGGGTTAGTCCAGAGAGGTGTTCTTTTAGGTGGG------ATTCCTAAAAGGCGCCCTCCTCCaaactttattataaa----g i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369234 178 + 155834243 CTTGTGCATTCTAGGGAG--AATTAATAATTTCCTGAGCCAGGAAAACTGGGATCTTCATCTGTGATCCTTTTTTATTCTCCTCTGAAGCACTGATTAGA-GGTTAGACCAGAGGGGTGTTCTTTCAAGTGAGATTCTTATTCATAGGTTATCCTCCCCTTCAAACTTTGTAACACCGGTT- i calJac3.chr7 C 0 I 302 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=4538.000000 s hg38.chrUn_GL000218v1 96762 4 + 161147 AAGA s panTro4.chr3 77171885 4 + 202329955 AAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341064 4 + 202140232 AAGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45363 4 - 87690 AAAA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24969 4 + 231459 aaaa i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369714 4 + 155834243 AAGA i calJac3.chr7 I 302 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=-1290.000000 s hg38.chrUn_GL000218v1 96766 2 + 161147 CT s panTro4.chr3 77171889 2 + 202329955 CT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341068 2 + 202140232 CT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45367 1 - 87690 C- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24973 1 + 231459 c- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369718 2 + 155834243 CT i calJac3.chr7 C 0 C 0 s tupBel1.scaffold_133938.1-150249 11879 2 + 150249 CT i tupBel1.scaffold_133938.1-150249 N 0 N 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=27209.000000 s hg38.chrUn_GL000218v1 96768 40 + 161147 GAAGTACTCTTAAGGCTGAAGACCATCATCCAGTACCCCA s panTro4.chr3 77171891 40 + 202329955 GAAGTACCCTTAAGGCTGAAGACCATCATCCAGTACCCCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341070 40 + 202140232 GAAGTACCCTTAAGGCTGAAGACCATCATCCAGTACCCCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45368 21 - 87690 ------------------AGGACCATCATCTGGCACCCC- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24974 21 + 231459 ------------------aggacCATCATCTGGCACCCC- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369720 40 + 155834243 GAAGAACCCTTAAGACTGAAGACCATCATCCAGTATCCCA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 863133 2283 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=577.000000 s hg38.chrUn_GL000218v1 96808 2 + 161147 -TC s panTro4.chr3 77171931 2 + 202329955 -TC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341110 2 + 202140232 -CC i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35369760 2 + 155834243 -TC i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 865416 3 - 1133132 AAC i tarSyr2.KE941085v1 I 2283 I 612 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e papAnu2.JH684932 24995 0 + 231459 C e macFas5.chr5_KE145639_random 45389 0 - 87690 C e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=129944.000000 s hg38.chrUn_GL000218v1 96810 179 + 161147 TCCCTCGCGGAATCAGTGAGTTCCTCCATGGAAACTAGGTCTCGTATAAACTTCCATAAATGCAATCCAGGA--GGAC---TAGGCAGGTCACACAGTGAAGGAGGGAACCAGAAACTTCACTTGCTAAATAGACACCAGGAAACCCAACTAATACAAACGCCCAGC-TGAAGACTAGAGGCACA s panTro4.chr3 77171933 179 + 202329955 TCCCTCGCGGCATCAGTGAGTTCTTCCCTGGAAACTAGGTCTCGTATAAACTTCTGTAAACGCAACCCAGGA--GGAC---TAGGCAGGTCACACAGTGAAGGAGGGAACCAGAAACTTCACTTGCTAAAGAGACACCGGGAAACCCAACTAATACAAACGCCCAGT-TTAAGACTCGAGGCGCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341112 179 + 202140232 TCCCTCGCGGAATCAGTGAGTTCTTCCCTGGAAACTAGGTCTGGTACAAACTTCCGTAAACGCAACCCGGGA--GGAC---TAGGCAGGTCACACAGTGAAGGACGGAACCAGAAGCTTCACTTGCTAAAGAGACACCGGGAAACCCAACTAATAAAAACGCCCAGT-TTAAAACTCCAGGCGCA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45389 152 - 87690 -------------CAA------CTTCCCTAGAAACCAGATCTTGTATAAACTCCTATAAACTAAAGCGGGGATGGGATGCGTAGGAAGGGGACAC------------AAGCAGAATCTTCACTTGCTGAAAAGACACCGGGAAACCCCACTAATACCCTCGCCAGGTAGTAGGAC--GGTGTGCA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 24995 152 + 231459 -------------CAA------CTTCCCTAGAAACCAGATTTTGTATAAACTCCTATAAACTAAAGCGGGGATGGGATGCGTAGGAAGGGGACAC------------AAGCAGGATCTTCACTTGCTGAAAAGACACCGGGAAACCCCACTAATACACTCGCCAGGTAGTAGGAC--GGTGTGCA i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369762 180 + 155834243 TCCCTCGCAAAATCCGTGACTTCTTCCCTGGAAACTAGGTCTTGTATAAACTTCTGTAAACTCAACCCAGGA--GGAC---TAGGCCGGTCACACAGTGAAGTTTCACACCAGAAACTTCACTCGCCAAAGAGACGCCGGAAAACCCAACGAATACAAACGCCAGATAGTAAGACTCGAGGCGCA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=24634.000000 s hg38.chrUn_GL000218v1 96989 25 + 161147 CGCATTTCG-CACTACTCCTCTGGGA s panTro4.chr3 77172112 25 + 202329955 CGCGTTTCG-CACTACTCCTCTGGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341291 25 + 202140232 CGCGTTTCG-CACTACTCCTCTGGGA i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45541 25 - 87690 CGCGCTTCG-TACTCCTCATCTGGGA i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25147 25 + 231459 CGCGCTTCG-GACTCCTCATCTGGGA i papAnu2.JH684932 C 0 C 0 s rhiRox1.KN299240v1 318663 26 - 1849528 TAGACTTAGCGATTATCCCTCGAGGA i rhiRox1.KN299240v1 N 0 N 0 s calJac3.chr7 35369942 22 + 155834243 CGCGCTTCG-CACG---CCTCTGGGA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=25156.000000 s hg38.chrUn_GL000218v1 97014 25 + 161147 ATGGGGAACGTCTCCCGAGAACTGT s panTro4.chr3 77172137 25 + 202329955 ATGGGGAACGTCTCCCGAGAACTGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341316 25 + 202140232 ATGGGGAACGTCTCCCGAGAACTGT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45566 25 - 87690 ATGAGGGGCATCTTCCTAGAACTGT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25172 25 + 231459 ATGAGGGGCATGTTCCTAGAACTGT i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369964 25 + 155834243 ATGTGGGGCATCTCCCGAGAATTGA i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 39872 581 + 1077187 I a score=-2360.000000 s hg38.chrUn_GL000218v1 97039 2 + 161147 GT- s panTro4.chr3 77172162 2 + 202329955 GT- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341341 2 + 202140232 GT- i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45591 2 - 87690 CC- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25197 2 + 231459 CC- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35369989 2 + 155834243 GT- i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 40453 2 + 1077187 -TA i otoGar3.GL873804 I 581 I 194 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=1600.000000 s hg38.chrUn_GL000218v1 97041 2 + 161147 GT s panTro4.chr3 77172164 2 + 202329955 GT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341343 2 + 202140232 GT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45593 2 - 87690 GT i macFas5.chr5_KE145639_random C 0 I 89 s papAnu2.JH684932 25199 2 + 231459 GT i papAnu2.JH684932 C 0 I 89 s calJac3.chr7 35369991 2 + 155834243 AC i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40455 194 + 1077187 I a score=32449.000000 s hg38.chrUn_GL000218v1 97043 74 + 161147 -TAGCACGGGGACAGATGGGCAAAC-TGAGCTACATGAGGGTTGGTAACCGGGTCCCTCAGTGGCAGGACAGGAGC s panTro4.chr3 77172166 74 + 202329955 -TAGCACTGGGACAGATGGGCAAAC-TGAGCGTCATGCGGGTTGGTAACTGGGTCCCTCAGTGGCAGGACAGAAGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341345 74 + 202140232 -TAGCACCGGGACAGATGGGCAAAC-TGAGCGTCATGCGGGTTGGTAACCGGGTCCCTCAGCGTCAGGGCAGGAGC i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35369993 76 + 155834243 TCGCTCCCGGGACAGATGGGCAAACTTGAGTCTCACGCGGGTTGGTAACCGGGTCCCTCAGTGGCAAGGCAGGAGC i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e papAnu2.JH684932 25201 89 + 231459 I e macFas5.chr5_KE145639_random 45595 89 - 87690 I e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40455 194 + 1077187 I a score=45572.000000 s hg38.chrUn_GL000218v1 97117 47 + 161147 GCGGCCTGCAGACTCCGGGCCCAGGGCCACCAGCCTCGCCTACCCAC s panTro4.chr3 77172240 47 + 202329955 GCAGCCTGCAGACTCCGGGCCCAGGGCCACCGGCCTCGCCTACCCGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341419 47 + 202140232 GTGGCCTGCAGACTCCGGGCCCAGAGCCACCGGCCTCGCCTACCCCC i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45684 46 - 87690 GCGGCCTGCAGATTCC-GTCCCCGCGCCACCGGCTTCGCCCACCCGC i macFas5.chr5_KE145639_random I 89 C 0 s papAnu2.JH684932 25290 46 + 231459 GCGGCCTGCAGACCCC-GTCCCCGCGCCACTGGCTTCGCCCACCCGC i papAnu2.JH684932 I 89 C 0 s calJac3.chr7 35370069 47 + 155834243 CCAGCCTTCAGACTCCGGCCACAGGGCCACTGACCTCGCCTACCAGC i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40455 194 + 1077187 I a score=4884.000000 s hg38.chrUn_GL000218v1 97164 4 + 161147 TCCT s panTro4.chr3 77172287 4 + 202329955 TCCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341466 4 + 202140232 TCCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45730 4 - 87690 TCCG i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25336 4 + 231459 TCCG i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370116 4 + 155834243 TCCG i calJac3.chr7 C 0 C 0 s micMur1.scaffold_49734 1611 4 - 5713 CCCG i micMur1.scaffold_49734 N 0 N 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40455 194 + 1077187 I a score=28136.000000 s hg38.chrUn_GL000218v1 97168 24 + 161147 GCGCCTCTGGAACCCGCTTCACTG s panTro4.chr3 77172291 24 + 202329955 GCGCCTCTAGAACCCGCTTCACTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341470 24 + 202140232 GCGCCTCTAGAACCCGCTTCAGTG i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45734 24 - 87690 GCGCCTCTGGAACTGGCTTCAGTG i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25340 24 + 231459 GCGCCTCTGGAACTGGCTTCAGTG i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370120 24 + 155834243 GCGCCTCTGGAACCCGCTTCTGTG i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40455 194 + 1077187 I a score=2881.000000 s hg38.chrUn_GL000218v1 97192 2 + 161147 CT s panTro4.chr3 77172315 2 + 202329955 CC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341494 2 + 202140232 CC i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45758 2 - 87690 CC i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25364 2 + 231459 CC i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370144 2 + 155834243 CC i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 40649 2 + 1077187 CT i otoGar3.GL873804 I 194 I 277 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I a score=129473.000000 s hg38.chrUn_GL000218v1 97194 156 + 161147 GGGACCCCACGTCTGTCCTCCC-----------------AGCCCCCGCCAGGGTCCACGGCCCGCAAATGCACGTCAAGCCCCT---CCTGCCCGCGATGCGCCCAAGCGTCTGCCCCCA-CAAATGGGGAACACTGGTCTGGCC-CCCCGGGATCCCCCGAGGCCCACAGGTTCCT-C s panTro4.chr3 77172317 156 + 202329955 GGGATCCCACGCCTGTCCTCCC-----------------AGCCCTCGCCAGGGTCCGCGGCCCGCACCTGCACTTCAGGCCCTG---CCCGCCCGCGATGCGCCCACGCGTCTGCTCCCA-CAACTGGGGAACACTGGTCCGGCC-CCCCGGGATCCCTCGAGGCCCACGGGTTCCT-C i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341496 157 + 202140232 GGGACCCCACGCCTGTCCTTCC-----------------AGCCCCCGTCACGGTCCGCGGCGCGCACTTGCACGTCAGGCCCCG---CCCGCCCGCGATGCGCCCAACCTTCTGCTCCCACCAACTGGGGAACACCGGTCCGGTC-CCCCGGGATCCCCCGAGGCCCACGGGTTCCT-C i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45760 178 - 87690 GAGATCCCACGCCCGCCCTCCCAGCAGCGCCGCCCTTTTAGCCCCAGCGCTAGTCCGCCGCCCGCACCTGCGCGTCAGGCCCCG-CCCTCCCCCGAGATGTGCCCACGCCTCTGCTCCCACCAACTGGGGCACGTCGGCCCCGCCTCCCTATGGTGCCTCCAAGCCCGCTGTGTCCTGT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25366 179 + 231459 GGGATCCCACGCCCGCCCTCACAGCAGCGCCGCCCTTTTAGCCCCAGCGCTAGTCCGCCGCCCGCACCTGCGCGTCAGGCCCCGccccccccccGAGATGTGCCCACGCCTCTGCTCCCACCAACTGTGGCACGTCGGCCCCGCCTCCCTATGGTGCCTCCAAGCCCGCTGTCTCCGGT i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370146 154 + 155834243 GGG-CCCCGCAACTGTTCTCCC-----------------A--CCCCGCCAGGTTCCGCTGCCCGCACCTGCACGTCAGGCCCCG---CCCGCCCGCGATGCGCCCACGCTTCTGCTCCCACCAATTGGGAGACACCGGTCCGGCC-CCCCAGGATTCCCCGAGGCCCGCGGGTTCCT-C i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e tarSyr2.KE941085v1 865419 612 - 1133132 I e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40651 277 + 1077187 I a score=1911.000000 s hg38.chrUn_GL000218v1 97350 1 + 161147 T s panTro4.chr3 77172473 1 + 202329955 T i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341653 1 + 202140232 T i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45938 1 - 87690 T i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25545 1 + 231459 T i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370300 1 + 155834243 T i calJac3.chr7 C 0 C 0 s tarSyr2.KE941085v1 866031 1 - 1133132 T i tarSyr2.KE941085v1 I 612 N 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40651 277 + 1077187 I a score=43857.000000 s hg38.chrUn_GL000218v1 97351 69 + 161147 TTGCCCTCGCACCTACCCACAGGGACATAGAACCAAGCCCCAGGCCTGCT----CAGCTACACGACCGCCGCT s panTro4.chr3 77172474 69 + 202329955 TCGCCCTCGCACCGACCCGCAGGGACATAGAACCAAGCCCCAGGCTGGCC----CAGCTACAAGACCGCCTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341654 69 + 202140232 TCGCCCTCGCACCCACCCGCAGGGACATAGAACCAAGCCCCAGGACTGCC----CAGCTGCAGGAGGCCCTCT i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 45939 72 - 87690 TCATCCTACCACCAACCTGCAGGGATGAACACCCCAACCCCAGAGCTTCCAGAGCAGCCTCTGGACGGCAGC- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25546 72 + 231459 TCATCCTACCACCAACCTGCAGGGATGAACACCCCAACCCCGGAGCTTCCAGAGCAGCCTCTTGACGGCAGC- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370301 69 + 155834243 TCGCTCTCGCACCGACCCGCAGGGACACAAAACACAACCCCAGCCCTGCC----CAGCTGCATAAGGACCTCT i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40651 277 + 1077187 I a score=-491.000000 s hg38.chrUn_GL000218v1 97420 4 + 161147 GGGA- s panTro4.chr3 77172543 4 + 202329955 GGGT- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341723 4 + 202140232 GGGT- i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 46011 4 - 87690 AGGA- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25618 4 + 231459 AGGA- i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370370 4 + 155834243 TGAA- i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 40928 4 + 1077187 -GAAA i otoGar3.GL873804 I 277 I 872 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e panPan1.JH650567 939 34608 + 44305 I a score=240108.000000 s hg38.chrUn_GL000218v1 97424 349 + 161147 TCCGCACT--TCCGGAGGAAAATGGCGAAGTGGGCGGGGCGGCGCATGCGCAGAG-------AGAAAAGCTGGTTCCCAAGGTCC-TTGATGGTAACATCATTGGAAGGTGACACTACATTTCCTATGAGGCTCTGCGGTCCCCCGTTAGGAACGCACGCCGGACATTCTGTTTTGCCCAGCAGTGAGTCCAGTTACCCGGAGACCCGGACTTAATGGATCAGGACTGGTCCCTACCCACGTGACACAGATGTGGCATTCTGGTTCGTTATTAAATCCTGGTTTCACAGCCTGGGACATTGTGAAAATAATGGAGAAATTCCAATAGAAAACAATTGGTCTATGCTGTTAATGAGTAAC--------------------------------------------------- s panTro4.chr3 77172547 356 + 202329955 GCCGCACT--TCCGGAGGAAAATGGCGGAGTGGGCGGGGCGGCGCATGCGCAGAG-------AGAAAAGCTGGTTCCCAGGGTCC-TTGATGGTAACATCATTGGAAGGTGACACTACATTTCCCATGAGGCTCTGCGGTCCCCCGTTAGGAACCCACGCCGGACATTCTGTTTTGCCCAGCAGTGAGTCCAGTTACCCAGAGACCCGGACTTAATGGATCAGGACTGGTCCCTACCCAGGTGACACAGATGTGGCATTCTGGTTCTTTATTAAATCCTGGTTTCACAGCCTGGGACATTGTGAAAATAATGGAGAAATTTCAATAGAGGCCAATTAGTCTATGCTATTAATGAGTAACttttttt-------------------------------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42341727 348 + 202140232 TCCGCACT--TCCGGAGGAAAATGGCGGAGTGGGTGGGGCGGCGCATGCGCAGAG-------AGAAAAGCGGGCTCCCAAAGTCC-TTGATGGTAACATCATTGGAAGGTGACACTACA-TTCCCATGAGGCTCTGCGGTCCCCCGTTAGGAACGCACCCCGGACATTCTATTTTGCCCAGCAGTGAGTCCGGTTACCCGGAGACCCGGACTTAATGGATCAGGACTGGTCCCTACCCACGTGACACAGATGTGGCATTCTGGGTCTTTATTAAATCCTGGTTTCACAGCCTGGGACATTGTGAAAATAATGGAGAAATTCCAATAGAGGCCAATTGGTCTATGTTATTAATGAGTAAC--------------------------------------------------- i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 46015 358 - 87690 GCCGGGTTTCTCTGGCGGAAGATGGTGGCATAGGCGGGGCGGCGCATGCGCAAAGGCCATCCGGAAGAGCC-CTTCCCACCGTCCAGTGCTGGTGACGTCATTGGAAGCCGCGACGGCATTTCCCAGGAGCCACTGCGGTACCGAGGCGGGAA------------ATTCTGTT---CCAAG----------------CCGGAGCCGAGGAC-----GGATCCGGGTTGGCGTCTCCCCGCCTG--ACAGACATGGAA-TCTGG----TTAATAAATCCTGGTTTGACAACCAGGCACATTGTGGGAATATTGGGAAAATTCGAAT-GCGGCCAACTGGTCAATTATATTAGCAAGTAATCTTACTTCTTTTTTACT--TCTAAGTGTTGCTGTTACAGAA---AAACC-- i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25622 360 + 231459 GCCGCGTTTCTCTGGCGGAAGATGGTGGCGTAGGCGGGGCGGCGCATGCGCAAAGGCCATCCGGAAGAGCC-CTTTCCACCGTCCAGTGCTGGTGACGTCATTGGAAGCCGCGACGGCATTTCCCACGAGCCACTGCGGTGCCGAGGCGGGAA------------ATTCTGTT---CCAAG----------------CCGGAGCCGAGGAC-----GGATCGGGGTTGGCGTCTCCCCGCCTG--ACAGACGTGGAA-TCTGG----TTAATAAATCCTGGTTTGACAACCAGGCACATTGTGGGAATATTGGGAAAATTCGAAT-GCGGCCAACTGGTCAATTATATTAGCAAGTAATCTTGCTTCTTTTTTACT--TCTAAGTGTTGCTGTTAcagaa---aaacctt i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370374 394 + 155834243 TCCCCACT--GTCGGAGGAAAATGGCGGAGTAGGCGGGGCGGCTCATGCGCAGAGAT-----AAAAGAGCTGGTTCCCAAGGTTCTTTGCTGGTAACATCATTGGAAGGTGAGACTACATTTCCCATGAGGCTCCACGG-ACTCCGTTAGGCA-CCCTGCCAGACATTTTGTTTTTCCCAGCAGTGCGTCCCACTA-CCCTAGACCCGGATTTACTGATTCAGGACTGGTACCTACCCATGTGACACAGGTGT-GCATTCTGCTTCTTTATTAAATCCTGGTTTCACAACCCGGGACA-CGTGAAAATAATGGGCAAATTCCAATAGCGGCCAATTGGTCTATGCAATTAATGAATAACCTTATTTTTTATGTTCTAGTGTAGGTATTGCTGTTATAGAACCCAAG---- i calJac3.chr7 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e panPan1.JH650567 939 34608 + 44305 I e otoGar3.GL873804 40932 872 + 1077187 I a score=292919.000000 s hg38.chrUn_GL000218v1 97773 245 + 161147 tttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcaatggtgcgaccttggctcactgcaaactctgcctccca-----ggttcaagagattctcctgcctcagcctcctgagtatctgggattacaggc-gggcgccaccacactcgcctaatttttgta-tttttagtagaaacggggtttcaccatgttggtcaggctggtctctaactcctaacctc--gtg-atctgccctccta s panTro4.chr3 77172903 245 + 202329955 tttttttttttttgagacggagtctcactctgtcgcccaggctggagagcaatggtgcgatctcggctcactgcaacctccgcttcccg-----ggttcaagcgattctcctgcctcagcctcctgagtagctgggattacaggc-gcgcgccaccacactcgcctaatttttgta-tttttattagagacggggtttcaccatgttggtcaggctggtctcgaactcctgacctc--gtg-atccgccctcctc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342075 245 + 202140232 tttttttttttttgagatggagtctcgctctctcgcccaggctggagtgcaatggcgcgatatcggctcactgcaacctccgcctcctg-----ggttcaagtgattctcctgcctcagcctcctgagtagctgggattacaggc-gcgcgccaccacacccacctaatttttgta-cttttagtagagacggggtttcaccaagttgatcaggctggtctcaaactcctgacctt--gtg-atccgccctcctt i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 46373 245 - 87690 ttttttttttttt--aacggattctccctccctctcccaggctggagggcagtggcgggatctcagctcactgcagcctccacctcccg-----ggttcacgcgatcctcctgcctcagcctccagaggaactgggactacaggc-gcgcgccaccacgcccggctaatttttgtg-tttttaatggagatggggtctccccatgttgcccaggctggtctcgaattcgtggcctcaagtg-atctgcccacctt i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 25982 245 + 231459 ttttttttttttt--aacggattctccctccgtctcccaggctggagggcagtggcgggatctcagctcactgcagcctccacctcccg-----ggttcacgcgatcctcctgcctcagcctccagaggagctgggactacaggc-gcgcgccaccgcgcccggctaatttttgtg-tttttaatggagatggggtttccccatgttgcccaggctggtctcgaattcgtggcctcaagtg-atctgcccacctt i papAnu2.JH684932 C 0 C 0 s calJac3.chr7 35370768 251 + 155834243 TCtttttttttctgagatggagtctcgctctgtcgcccatgctggagtacagtggcgtgatcttggctaactgcaaactccccctctctggttcggttcaagcgattctcctgtctcagcctcctgagtagctgggactacaggc-acgcggcaccatgcccagctaatttttgtgtttttttgtagagatggggtttgaccatgctgtccaggctggtctggaactcctgacttc--atg-atccgcccgcctt i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 41804 234 + 1077187 tttttttttttttgagacagagcctcaagctgtcctcctgggtagagtgccgtggc---atcatggctcacagcaacctccaactcctg-----ggctcaagcgagtctcctgcctccacctcccgaatagctgggaccacaggctgccggccacaatgcctggctatttcttg---gttgcagcctcattgttgtttg-----gtgggcagggctggatttgaaccctacaccttaggtgtatgtggct----- i otoGar3.GL873804 I 872 C 0 e nomLeu3.chr21_GL397661_2_random 95072 0 - 139590 C e panPan1.JH650567 939 34608 + 44305 I a score=43678.000000 s hg38.chrUn_GL000218v1 98018 27 + 161147 ggcctcccaaagtgctgggattacagg s panTro4.chr3 77173148 27 + 202329955 ggcctcccaaagtgctgggattacagg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342320 27 + 202140232 gaccttccaaagtgctgggattacagg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 95072 27 - 139590 agcctcccaaagtgctgggattacagg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr5_KE145639_random 46618 27 - 87690 ggccttcaaaagtgctggtgttgcggg i macFas5.chr5_KE145639_random C 0 I 15414 s papAnu2.JH684932 26227 27 + 231459 ggccttcaaaagtgctggtGTTGCGGG i papAnu2.JH684932 C 0 I 14541 s calJac3.chr7 35371019 27 + 155834243 ggcctccgaaagtgctgggactacagg i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 42038 26 + 1077187 -ggcgccttagccacttgagccacagg i otoGar3.GL873804 C 0 C 0 e panPan1.JH650567 939 34608 + 44305 I a score=8304.000000 s hg38.chrUn_GL000218v1 98045 8 + 161147 -cgtgagcc s panTro4.chr3 77173175 8 + 202329955 -cgtgagcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342347 8 + 202140232 -cgtgagcc i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 95099 8 - 139590 -tgtgagcc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35371046 8 + 155834243 -catgagcc i calJac3.chr7 C 0 C 0 s otoGar3.GL873804 42064 9 + 1077187 cgctgagcc i otoGar3.GL873804 C 0 N 0 e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=162761.000000 s hg38.chrUn_GL000218v1 98053 209 + 161147 accgcgcccagccCTCAAGTCTATTTTTTATAGATGCATTCGAAAGCATG-AAAAAAATCATGTCTCTATTTTACTTTAAATTTTTAAAAACACAACTAATGAATATGGTAATTCTCTTCCAATCTGTTATCTTTTCTCTCACGAAACTAATTTGTGAGCTTTCAAT--------TTACACAGTTAGAAAAAAATGCTCTAGTGTATATACTAGGATA s panTro4.chr3 77173183 208 + 202329955 actgcgcccagccCTCAAGTCTATTTTTTATAAATGCATTCGAAAGCATG-AAAAAAATCATGTCTCTATTTTACTTTAAAATTTTAAAAACACAACTAATGAATATGGTAATTCTCTTCCAATCCGTTATCTTTTCTCTCACTAAACTAATTTATAAGCCTTCAAT--------TTACACAGTTAC-AAAAAATGCTCTAGTGCATATACTGGGATA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342355 212 + 202140232 accgcgcctggccCTCAAGTCTATTTTTCATAGATGCATTCGAAAGCATG-AAAAAAATCATGTCTCTATTTTACTTTAAATTTTTAAAAACACAACTAATGAATATGGTAATTCTCTTCCAATCCGTTATCTTTTCTCTCATCAAGCTAATTTGTGAGCCTTCAATAGATTATATTACACAG-----AAAAAATGCTCTAGTGTATATACTAGGATA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 95107 208 - 139590 accgcacccagccCTCAAGTCTATTTTTTATAGATGCATTTGAAAGCATG-GAAAAAATCATGTCTCTATTTTACTTTAAATTTTTAAAAACACAACTAATGAATATGGTAATTCTCTTCCAATCCATTATCTTTTCTCTCATTAAACAAATTTGTGAGCCTTCAAT--------TTACACAGTTAG-AAAAAATGCTGTAGTGTATGTACTAAGATA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35371054 217 + 155834243 accacgcccagccCCCAAGTCTATTTTTTATAGATGCATTAGAAGGCATGAAAAAAAATCATGTCTGTATTTTACTTTAAATTTTTCAAAATACAAATAATGAATATGGTAATTCTCTTCCAATCGGTTGTCTTTTCTCTCACTAAACTAATTTGTGAGCCTTCAATAGATTATATTACATAGTTAG-AAAAATTGCTCTAGTGTATATACTGGGATA i calJac3.chr7 C 0 I 667 e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=33767.000000 s hg38.chrUn_GL000218v1 98262 44 + 161147 AAATAACAGGGTCATAAGACAAGTGCACTCCATAATCTTTGTGA s panTro4.chr3 77173391 44 + 202329955 AAATAACAGGGTCATAAGACAGGTGCACTCCATAATCTTTGTGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342567 39 + 202140232 AAATAACAGAGTCATAAGACAGG-----GTCATAATCTTTGTGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 95315 44 - 139590 AAATAATAGGGTCATAAGACAGGTGCACTCCATAATCTTTGTGA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s calJac3.chr7 35371938 44 + 155834243 aaataaCAGGGTCATAAGACAGGCACACTCCATAATCTTTGTGA i calJac3.chr7 I 667 I 983 e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=1533230.000000 s hg38.chrUn_GL000218v1 98306 2071 + 161147 CAACTTACACTTCCAGTGTCTGATGAACATTTGCCCATAAACTCCCACGTTT----CATCCATACATCCATCAATCAAATCTACCTATC----TTTATTTATTTATTGTGCGAAATACCTGAACTTTGCCTTTCCTTCCCTGATTTCTGCCACAAACTAGGCAAGGAGTTCTGCCTAGGGGTTTTTCAGAGCTCCGGCTACCACCGAGGTTCCTAACAGGGAAATTGCCAGCTTGAATGCTTGGGGTTGATGTGGGAGTGCGTGTGAAACGGGTGTGGGGTGAAAGGGCAGTGAACTTTGTAGGTGGGTAGATGGGGGTGTGAAGGGCTTTCAGGTAAGAGGCACAGAGgaaactgggagaggcagcgaaagcacttcacgcctcagatcaccagaggatgctcccaccagcaccgtgacagtttgccagtgccacggcaacacaggaagtccccaccccttgccatggaaacagctggaagttactgccca-tttctagctatttctgagtaacccgccccttaattagcatgtcattaaaagtgaattataaaaatgactacaagccacacctaggctgctactctgggagcacaacccacagagggctccctgccctgcaggagcggacgcagggctgtaacaccgccaatgtctccatagagctgctttattccaccacaggcttgctttt--------------ggattccttcctgagcgacgccaagaacctgcccTTCCTCAGTGTGACTCTTGCCTAAAATCTATCCCTGGTTTTCTCTTTTCCTAAGCATGCCCTGACTTGTTCTTTCATCTCCTCTGAACTTGCAATTGCTCCTCAGTGACTCTATTCTGCAGATCCAGAAAACTCAACCTTAATCTTCCCAGAGCCCTGTTGTCTCCAATATTGGAATATCTAGCCTTGCTTTCTCAGACGCCTAGATTACAGGCCTCTCTCTTGAACACCTATTGGTAAGGTATCCGGGGATCCTTTAAATACACGATGATTGGCAGGGTTTACATAGGGGAAATCAGTGTCTGACAATTCGCCTTCCAGGATATGGATTGTCATTCCCTCTCTTTGTGGGCCCCAGTCTCCTATACATAAAAGTAGAGATTGTAATAGTCATTTGACT-TGCAGATACCTCACCCCGAACCCACCTACTATAATGTAAAAGCCAAGAATGCAAACCCTTTCCTCACCCCGTGAAGGTAAAGTCCTCAGAGCCAAGGAGAGAAGGCTCAGGGATGGTACCTAGGTGTTTCCAACACTAACCATGCATTGTAGTTTTTAGTGTTCAAGTTTAAGcttcttatgttaaagttaccccagctttaattatattgtaacaaga-tttatttttgtaattccatttttggattcttgatttcttggtaaagaaatacagtt-atttttgtataccaatcttatatagtgttacattccaaaatttgttcatgagtcctaacactttttagtaaatttcttatgattttctaaatgcaagatcatgtcatctgtacataaagataactgtacttcttcctttccaatctagatgccgtttatttatttacattgccaagttgtcccagctaCCACtgttatcaagtaaaagggtctcactacccaaagctctagaagccagtaacatgacactaagtttttgagaagagaaaaactttaaagtcaaaccAAAACCTATGGGATACAggccaggcgcagtggctcatgcctgtaatcccagcactttgggaggccgagttgggtggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaacaaaaattagctgggcatggtggcgggcacctgtagtcccagctactc----ggctgaggcaggagaatggcatgaacccagaaggcagagcttgtagtaagccaagattgcaccactgcactccagcctgggcaacag-agagagactccgtctccaaaaataaacaaaaacaaaaaaacaaaaa--------------------ACaaacctatgggatacagtaaaa--------acagtactaaggagtaagtttatagcaaaaagcacct s panTro4.chr3 77173435 2067 + 202329955 CAACTTACACTTCCAGTGTCTGATAAATATTTGCCCATAAACTCCCACGTTT----CATCCATCCACCAATCAATCAAATCTAGCTATC----TTTGTTTATTTATTGTGAGAAAGACCTGAACTTTGCCTTTCCTTCCCTGATTTCTGCCACAAACTAGGCAAGGATTTCTGCCTAGGGGTTTCTCAGAGCTCCGGCTACCACCGAGGTTCCTAACAGGGAAA-CGCAGGCTTGAATGCTCAGGGTTGATGTGGGAGTGCGTGTGAAACGGGGGTGGGGTGAAAGGGCAGTGAAGTTTGTAGGTGGGCAGATGGTGGTGTGAAGGGCTTTCAGGTAAGAGGCACGCAGGAGACTGGGAGAGGCAGCGAAAGCACCTCACGCCTCAGAtcaccagaagacgctcccaccagcgccgtgacagtttgccaatgccacggcagcacgggaagtccccaccccttgccatggaaacagctggaagttactgccca-tttctagctatttctgaataacccgccccttaattagcatgccattaaaagtgaattataaaaatgactgcaagccacccccaggctgctactctgggagcacaacccacggagggctccctgccctgcaggagtggacgcagggctgtaacaccgccagtgcctccgtagagctgctttcttccaccacaggcttgctttt--------------ggattccttcctgagcgacgccaagaacctgcccTTCCTCAGTGTGACTCTTGCCTAAAACCTATCCTTGGTTTTCTCTTTTCCTAAGCATGCCCTGACTTGTTCTTTCATCTCCTCTGATCTTGGAATTGCTCCTCAGTGACTCTATTCTGCAGATCCAGAAAACTCAACCTTAATCTTCCCAGAGCCCTGTTGTCTCCAATATCGGAATCTCTAGCCTTGCTTTCTCAGACGCCTAGATTACAGGCCTCTCTCTTGAACACCTATTGGTATGGTATCTGGGGATCCTTTAAATACACGATGATTGGCAGGGGTTACATAGCGGAAATCAGTGCCTGACAATTTGCCTTCCAGGATATGGACTgtcattccctctcttcgtgggcctcagtctcttatccataaaagtagagattgtaatacTCATTTGAAT-TGCAGATACCTCAACTCGAACCCACCTAATATAATGTAAAAGCCAAGACTGCAACCCCTTTCCTCACCCCGTGAAGGTAAAGTCCTCAGAGCCAAGGAGAGAAGGCTCAGGGATGGTACCTGGGTGTCTCCAACGCTAACCATGTATTGCAGTTTTTAGTGTTCAAGTTTAAGCTT---------------CCCCAGCtttaattctattgtaacaaga-tttatttttgtaattccatttttggattcttgatttcttggtaaagaaatacagtt-atttttgtataccaatcttatatagtgttacattcttaaatttgttcatgagtcctaatactttttagtaaatttcttacgattttctaaatgcaagatcatgtcatctgtacataaagataactgtacttcttcctttccaatctggatgccgtttatttatttacgttgccaagttgtcccagctaCCACtgttatcaagtaaaagggtctcactgcccaaagcactagaagccggtaccatgacactgagttttcgagaaaagaaaaagtttAAAGTCAAACCAAAACCTATGGGGTACAggccgggcacagtggctcatgcctgtaatcccagcactttgggagaccgaggcgggcggatcgcgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaacaaaagttagccgggagtgatggcgggcgcctgtagtcccagctactcgggaggctgaggcgggagaacggcgtgaacccgggaggcggagcttgcagtgagccgagatcacgtcactgcactccagcctgggcaacag-agcgagactccgtctcaaaacaaaaacaaaaacaaaaacaaaaaca--------------------aaaaacctatgggatacagtaaaaacactactacagtactaagaggtaaatttatagcaaaaagcacct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42342606 2029 + 202140232 CAGCTTACACTTCCAGTGTCTGATAAATATTTGCCCATCAACTCCCACATTTCATCCATCCATCCACCAATCAATCAAATCTACCTATC----TTTATTTATTTATTGTGAGAAAGACCTGAACTTTGCCTTTCGTTCCCTGATTTCTGCCACAAACTAGGCAAGGAGTTCTGCCTAGGGGTTTCTCAGAGCTCCGGCTACCACCGAGGTTCCTAACCGGGAAA-CGCCGGCTTGAATGCTCAGGGTTGATGTGGGGGTGCGTGTGAAATGGGGGTGGGGTGAAAGGGCAGTGAAGTTTGTAGGTGGGCAGATGGGGATGTGAAGGGCTTTCAGGTAAGAGGCACGTAGgaaactgggagaggcagcgaaagcacctcacgcctcagatcaccagaagatgctcccaccagcgccgtgacagtttgccaacgccatggcagcacgggaagtccccaccccttgccatgggaacagctggaagttactgccca-tttctagctatttctgaataacccgccctttaattagcatgctactaaaagtgaattataaaaatgactgcaagccac-cccaggctgctactctgggagaacaacccacggagggctccctgccctgcaggagcagacgcagggctgttacaccgccagtgcctccgtagagctactttcttccaccagaggcttgctttt--------------gaattccttcctgagcgaggccaagaacctgcccTTCCTCAGTGTGACTCTTGCCTAAAACCTATCCCTGGTTTTCTCTTTTCCTAAGCATGCCCTGACTTGTTCTTTCATCTTCTCTGATCTTGCGATTGCTCCTCAGTGACTCTATTCTGCAGATCCAGAAAACTCAACCTTAATCTTCCCAGAGCCGTGTTGTCTCCAATATTGGAATCTCTAGCCTTGCTTTCTCGGACGCCTGGATTACAGGCCTCTCTCTTGAACACCTATTGGTATGGTATCTGGGGATCTTTTAAATACGTGATGATTGGCAGGGGTTACATAGGGGAAATCAGTGCCTGACAATTCGCCTTCCAGGATGTGGACTGTCATTCCCTCTCTTTGTGGGCCTCAGTCTCTTATCCATAAAAGTAGAGATTGTAATACTCATTTGAAT-TGCAGATACCTCACCCCAAACCCACCTAATATAATGTAAAAGCCAAAAATGCAACCCCTGTCCTCACCCCGTGAAGGTAAAGTCCTCAGAGCCAAGGAGAGAAGGCTCAGGGATGGTACCCGGGTGTTTCCAACACTAACCGtgtattgtagtttttagtgttcaagtttaagctt---------------ccccagctttaattctattgtaacaaga-tttatttttataattccatttttggattcttgattgcttggtaaagaaatacaatt-atttttgtataccaatcttgtatagtgttacattcctaaatttgttcatgagtcctaatactttttagtaaatttcttat-attttctaagtacaagatcatgtcatctgtacataaagataactgtacttcttcctttccagtctagatgccgtttatttatttacgttgccaagttgtcccagctaTCACTGTTATCAAG--------------tgcccaaagcactagaagctggtaacgtgacactgagtttttgagaaaagaaaaactttaaagtcaaaccAAAATCTATGGGATACAggccgggtgcagtggctcatgcctgtaatcccagaactttgggaggccgaggtgggtggatcacaaggtcaggagatcgagaccatcctggctaacgcgatgaaaccccatctctactaaaaatacaaaaaacaaaaattagccgggcgtggtggtgggcgtctgtagtcccagctactcgggagtctaaggtgggagaatggcgtgaacctgggaggcggagcttgcagtgagctgagatcctgccactgcactccagcctgggtgacag-agcaaggctccgtctc------------------aaaagaaaaaaa--------------------aaaaacctatgggatacagtaaaa--------acagtactaaggggaaactttacagcaaaaaacatct i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 95359 2068 - 139590 CAACTTACACTTCCAGTGTCTTACAAATATTTTCCCATAAACTCCCACGGTTcatccatccatccatcaatcaatcaaatctacctatc--------tttatttatTGTGAGAAAGACCTGAACTTTGCCTTTCCTTCCCTGTTTTCTGCCACAAACTAGGCAAGGAGTTCTGCCTAGGGGTTTCTCAGAGCTCCAGCTACCACCGAGTTTCCTAACAGGGAAA-TGCCAGCTTGAACATTCAGGGTTGATGTTGGAGTGCATGTGAAATGGGGGTGGGGTGAAAGGGCAGTGAAGTTTGTAGGTGGGCAGTTGGGGGTGTGAAGGGCTTTCAGGTAAGAGGCACGCAGgaaactgggagaggcagcgaaagcacctcacacctcagatcaccagaagatgctcccaccagcgccgtgacagtttgccaatgccatggcagcatgggaagtccccaccccttgccatgaaaacagctggaagttactgccca-tttctagctacttctgagtaacccgccccttaattagcatgccattaaaaatgaattataaaaatgactgcaacccacccctaggctgctactctgggaacacaacccacggagggctccctgccctgcaggagtggccgcagggctgtaacaccgccaatgcctccatagagctgctttcttccaccacaggcttgcttttgaattccttcctgagAATTCCTTCCTGAGAGACGCCAAGAACCTGCCCTTCCTCAGTGTGACTCTTGCCTCAAACCTATCCCTGGTTTTCTCTTTTCCTAAACATGCCCTGACTTGTTCTTTTATCTCCTCTGATCTTGCAATTGCTCCTCAGTGACTCTATTCTGCAGATCCAGAAAACTCAGCCTTAATCTTCCCAGAGCCCTGTTGTCTCCAATATTGGAATCTCCAGCCTTGCTTTCTCAGACGCCTAAATTACAGGCCTCTCTCTTGAGCACCTATTGGTATGGCATCTGGGGATGCTTTAAATACACGATGATTGGCAGGGGTTACATAGTGGAAATCAGTGCCTGACAATTCGCCTTCCAGGATATGGACTGCCATTCCCTCTCTTTGTGGGCTTCAGTCTTTTGTCCATAAAAGTAGAGATTGTAATACTCATTTGAAT-TGCAGATACCTCACCCTGAACCCACCTAATATAATGTAAAAGCCAAGAATGCAACCCCTTTCCTCACCCCGTGAAGGTAAAGTCCTCAGAGCCAAGGAGAGTAGGCTCAGGGATGGTATCTGGGTGTTTCCAACATTAAcaatgtattgtagtttttagtgttcaagtttaagctt---------------ctccagttttaattctattttaacaaga-tttatttctgtaactcaatttttggattcttgatttcttggtaaagaaatgcagtt-atttttgtataccaattttatatagtgttacattcctaaatttgttcatgagt-ctaatactttttagcaattttcttatgattttcttaatgcaagagcatgtcatctgtacataaagataactgtacttcttcctttccaatctagatgctgcttatttatttacattgccaagttgttccagctaCCACtgttatcaagtaaaagggtctcactgcccaaagcactagaagccgataccatgaccctgagttttcgagaaaagaaaaactttaaagtcaaaccAAAACCTATAGGATACAAgctgggcgcagtggctcatgcccgtaatctcagcactttggaaggccgaggcgggtggatcatgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtgtctactaaaaatacaaaaatcaaaaattagccaggtgcagtggcgggcacctgtagtcccaactacttgggaggctgaggtgggagaatggcgtgaacccaggaggcagagcttgtagtgagccaagatcccgacactgcactccagcctgggaaacag-agtgagacactgtctc----aaaaacaaaaaacaaacaaataaaca--------------------aaaaTcctatgggatacagtaaaa--------acagtactaagaggtaagtttatagcaaaaagtacct i nomLeu3.chr21_GL397661_2_random C 0 I 9356 s calJac3.chr7 35372965 2009 + 155834243 CAACTTACACTTCCAGTGTCTGATAAATATTTGCCCATAAATTCCCACATTT----------------CATCAATCCAGTCTACCCATCTTTATTTATTTATTTATTGTGAGAAAGACCTGAACTTTGCCTTCCTGTCCCTGCTTTCTGTCACAAACTAAGCAAGGCATTCTGCACAGGGGTTCCTCGGAGCTCCGGCTACCACCGAGGTTCCTAACAGAGAAG-AGCTGGCTTGAATGCTCAGGGTTGATGTGGGAGTTCTTGTGAAACGGGGGTAGGATG-AAGGGCAGTGACATTTGTGGGTGGGCAGATGGGGGTGTGAAGGGCTTTAAGGTAAGAGGCACACAGGAAACTGGGAAACGCAGTGAAAGCACCTCAGGCCACAGACCAccagaagatgttcccaccagtg-cgtgacagtttgccagtgcctgggcagcatggaaaatcactgccccttgccatggaaacacctgggagttactgcccattttctagctatttctgaataacccgccccttaattagcatgcaattaaaag-------------tgactacaaaccac-cctgggctgctgccctggtagtacaacctgtgcagtgctcccggctctgca------gtcagaaagctgccacactgccaatgcct-cgtagagccacgttcttccgccgcaggcttgccttt--------------gaattccttcctgagcaacaccaagaacctgcccTTCATCAGTGTGACTCTTGCCTAAAACCTGTTCTTGGTTTTCTCTTTTACCAAGTATCCCCTGCCTTG-TCCCCCATTGTCTCTGATCTCGCAATTGCTCTTCAGTGACCCTATTCTGCAGATCCACAAAACTCAACTTTAATCTTCCCAGAGCCCTGCTGCCTCCAGTATTGGAATCTCCAGCCTTCCTTTCTCAGA-GCCTAGATTACAGGCCTCTCTCTTGAACACCTATTTGTATGGTATCTGGGGATCCTCCAAATACA-GGTGATTGGCAGGGGTTACATAGGGGAAATCAGTGCCTGATATTTCACCTTCTAGGATATGGATTGTCATTCCCCATCTTTGTGGGCCTCAGTCTCTTATCCATAAAAGTAGAGATTGTGATGCTCATTTGAATGTGCAGACACCTCACCCCGAACCCACCTAATATAATATAAAAGCCAAGAATGCAATCCCTCTCCTTACCCTATGGA-GTAAAGTCCTCAGAGCCAAGGAGAGAAAGCTCAGGGATGATACCTGGGTGTTTCCAACAttaaccatgtactgtagtttttagtgttcaagtttaagtttcttttgttaaagttatcccagctttgattccattgtaacaggattttatttttgaaattccatttttggattcttgatttcttggtaaagaaatacaattgatttttgaatgtcaatcttgtagagtgttacattcctagatttgttcatgagtcctaatactttttagtaa-tagtgtatgattttctaaatgcaagatcctgttatccgtacataaagataactgtacttcttccttttcaatctagatgtcatttatttatttACATTGTCAAgttg--ccaact-------------aaaaagcggggctcactgcccaaggcactcaaagccaatactatgaca--gagtttttgagaaaagaaaaactt-----------------------------ggctgggcgcggtggctcacacctataatcccagcactttgggaggccaaggcgggtggatcacgaggttaagagatcgagaccatcctggtcaacaaggtgaaacccggtctctactaaaaatacaaaaa-------ttagctgggcatagtggtgcgtgcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacccagaaggtggaggttgtggtgagccaagatcatgccattgcactccagtctgggtaacagcagcgaaactctgtctcaaaaaaaaaaaaaagaaaagaaaagaaaaaCTTTATATTTAAAGTcaaaccaaaacctatgggata-agcaaaa--------gcagtactaagagataagtttatagcaaaaaacacct i calJac3.chr7 I 983 C 0 e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=40335.000000 s hg38.chrUn_GL000218v1 100377 91 + 161147 acatc-aaaaaaagtagaaaaacttcaaataaacaacctaataatgcatcttaaatagttagaaaagcaagagcaaaccaaaaccaaaatta s panTro4.chr3 77175502 90 + 202329955 acatc-aaaaaaagtag-aaaatttcaaataaacaacctaataatgcatcttaaataattagaaaagcaagagcaaaccaaaaccaaaatta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42344635 91 + 202140232 acatcaaaaaaaagtagaaaaacttcaaa-aaaaaacctaataatgcatcttaaataattagaaaagcaagagcaaaccgaaaccaaaatta i ponAbe2.chr3 C 0 C 0 s calJac3.chr7 35374974 87 + 155834243 acatc-aaaaaaagtagaaaaacttcaaatgaacaaactaataatgcatcttaaataattagaa----aagagcaaaccaaatccaaaatta i calJac3.chr7 C 0 N 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=58149.000000 s hg38.chrUn_GL000218v1 100468 233 + 161147 gtagaaggaaacataacaaagatcagagcagaaataaatgaaattgaaatttaaaaatataaaatatcaatgaaatgaaaagttaatatttttttaaaagaccaacaaaatcaacaaacatttagccagactaagagaaaagagagaagactcaaatacataaaaccagagattaaaaaggagacactgcaactgatactgcagaaattcaagtaatcattagaaactattat s panTro4.chr3 77175592 232 + 202329955 gtagaaggaaacacagcaaagatcagagcagaagtaaatgaaatttaaatttaaaaatataaaatatcaatgaaatgaaaagttaata-ttttttaaaagaccaacaaaatcaacaaacatttaaccagactaagaaaaaagagagaagactcaaatacataaaaccagagattaaaaaggagatactacaactgatactgtggaaattcaaagaatcattggaaactattat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42344726 231 + 202140232 gcagaaggaaacatagtaaagatcagagcagaaataaatgaaattgaaatttaaaaatataaaatatcaatgaaatgaaaagttaata--tttttaaaagaccaacaaaatcaacaaatgtttagccagactaagaaaaaagagtgaagactcaaatacataaaaccagagattaaaaaggaaacactacaactgatactgcggaaattcaaagaatcattagaaactattat i ponAbe2.chr3 C 0 I 1474 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I a score=33946.000000 s hg38.chrUn_GL000218v1 100701 433 + 161147 gaccaactatattccaataaattgaaaaacctgcaagtcatggccaggcaccgtggctcatgcctgtaatcccaacactttgggaagccaaagcaggtgatcacctgagatcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggtgtgcacctgtactcccagctactccagaggctgaggcaggagaatagcgtgaacctgggaggcagaagttgcagtgagctgagattgtaccaagctccatcctgggtgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccacaaccaaaccacaaacctagaagaactggataaatgagattgaacccataataaaacatctcctagcaaagaaaaac s panTro4.chr3 77175824 418 + 202329955 gactgactatattccaataaattgaaaaacttggaagaaatggccaggcaccgtggctcatgcctgtaatcccaacactttgggaggccaaggcaggtgatcacctgaggttaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcatgcaccagtactcccagctactccagaggctgaggcaggaaaatcacttgaacctgagaggcagaggttgcagtgacctgagattgtaccacgctccagcctgggtgacagagcaagactccatctcaaaaaaaaagaaaacaaagaa---------------acaaccaaacaacaaacctagaagaaatggataaatgaaattgaagccataataaaacatctcctagcaaagaaaagc i panTro4.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 26254 14541 + 231459 I e macFas5.chr5_KE145639_random 46645 15414 - 87690 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42344957 1474 + 202140232 I a score=53508.000000 s hg38.chrUn_GL000218v1 101134 121 + 161147 ctggatccaa---------tggcttcactgattaattttaccaaacattgaaggaagaattactatcaatcctactcaaactattccaaaaaacagagaagtctgtaatatttccaaaatcattctatgT--------------------------------------------------------------------------------------------------------------- s panTro4.chr3 77176242 130 + 202329955 ctggatccaatggcttcactggcttcactgattaatttcaccaaacattgaaggcagaattactatcaatcctactcaaactattccaaaaaacagagaaggctgtagtatttccaaactcatcctatga--------------------------------------------------------------------------------------------------------------- i panTro4.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 62059 232 - 87690 cTggatccag---------tggcttcactgattaattttaccaaacatctaaggaagaattactatcaatcctactcaaactattccagaaaacagagaaggctgttgtgtttccaaactcattctgtgaggctactattaccctgaaactaaaaccaaagaaactacaggtcaatatcactgataaacattgatccagaaatccccaatactagcaaaaaccaaattcaacaacacgcta i macFas5.chr5_KE145639_random I 15414 C 0 s papAnu2.JH684932 40795 232 + 231459 cTGGATCCAG---------TGGCTTCACTGATTAATTTTACCAAACATCTAAGGAAGAATTActatcaatcctactcaaactattccagaaaacagagaagactgttgtatttccaaactcattctatgaggctactATTACCCTGAAACTAAAACCAAagaaactacaggtcaatatcacTGATAAACATTGATCCAGAAATCTCCAATACtagcaaaaaacaaattcaacaacacGTTA i papAnu2.JH684932 I 14541 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e panPan1.JH650567 939 34608 + 44305 I e ponAbe2.chr3 42344957 1474 + 202140232 I a score=3220602.000000 s hg38.chrUn_GL000218v1 101255 3965 + 161147 Aaaagaccattcatcgtgtctaagtgggattcatcccaaggatgccaac--atggttcaacatatgcaaatcaatcaatgtgacacatcatatcaacagaatgaaggacaaaaaacatatgataatttcaattgatgctgaaaagcatttaataaaatccaatttccctgtgataaaaagaaaccccc-caaaaaactagatttagaaggaacataccacaacacaataaaaaccatatgcaacaaaccctcagccagtatcatcctgaacagagataacctgaaagcctttcttcta--------agatctggaacaaggcaagaatgtccacttccaacaatgttactcaacatagtactggaagtcctagctagagcaatcaagaaaattgaaaaacagtaaag-----------------------ggcatccaaatt-gaaagaagtaaaattattattgttttcttgtttgcaggtgatttgatcttatatttggaaaaacctaagaactccaccaaaaaactatcagaactgatcaacaaattc--agtcacatgatacaaaatcaaaatgcaaaaatcagtaacatttctaagtgccaaaactgaacaatctaaagaagaaaatcaaggacgtaatcccatttacaatagctacaaataaaataaaatatctaggaataaatgtaacaaaagaagtgaaagatctctacgatgaaaactatagaacaccaatgcaaaaaaattaaagaagacaccaaaaaaaaatggaaagatagtccatgttcattgattggaagagtaaatattgttaaaatacacatacttcacaaagcaatctacagacccaatgcaatccctattgaaatactaataacattcttcacagaaacag--aaaaaaaatcctaaaatttatatgaaatcataaaagacccagaatacccaaagccatccgtagcaaaaagaacaaaactggaagaatcacatcacctgacgttaaattatactacagagcaattgtaagctaaacagcatggtactggcataaaacagacacatagaccaatggaacagaatacagaacccagaaataaatcctcacatttacaactaactcattttcaatgaaggtgccaagaatatacatgggggagaggacagtctcttcaccaaattgtgctgggaaaactagatattcattggcagaa----------ttttttttt----tttgagatggagtctagctctgttgctcaggctgcagtgcagtggcgcgatctgggctcactgcaagctccacctcccgggttcacaccattctcctcctcagcctcccaagtagctgggagtacaaatgccc-ccaccacgcccagctatttt--------------tttttttttttgtatttttagtagagacggagtttcaccgtgttagccaggatgttcttgatatcctgccctcatgatctgcccacctcatcctcccaaagtcattggcagaataattaaactagaaccctctcttgtgctatatacaaaaatcaaatccaaatgggtt----aaagacttaaatcaaggacaagaaactactgaaagaaaacattagggaaactctccaggaaattggtctgggcacagatttcttgagtaatactccaaaagctcaggcaaccaaagcaaaaatgaacaaatggtatcacatgaagttcaaaagtttctgcatagtaaagaaaacaatggacaaagtgaaaagacaatccacagaatggaagaaaatatttgcaaactatatatctgacaagggattaataaccagaatatataaggagttcaaacaactctataag-aaaaaaactaataatccaattatttaaatgggcaaaaaatctgaacagacatttctcaaaagaaggcattcaggtcaggcgcagtggctcacacctgtaattccagcattttggggagccaagacagttggaccacttgagcccaggagttcaagaccaacctgaaaaacatagcaaataatttaaaaacctacctgggcatggtgatgcatgcctgtggtcccagctactcaggaggctgaggtgggaggattgcttgaaccctggtagtcataactacagtaagccatcattataccactgcactccagcctgggtgacagagtgagacactgtctc-aaaaaatgagcaaaaacaaaaaagaagatatataaatgtcaaataggtatatgaaaagatgctcaatatcaccgatcatcagagaaattcaaatcaaaactacaataagatatcatcttacccccattaaaatggcttttatgcaaaagacaggcaataacaaatgcttgcaagaatgtagggaaaagagaaccctcttactctgttggtgggaatgtaaattagtactttcactatggagaacaatatggaggtccctcaaaaaattaaaaatagaactatcatatgatacagcaatcccactgctgggtatatacccaagggagggaaaattagtatatgaaagagatatctgcattcccatatttatttcagtactattcataatagccaagatttggaagcaacctaagtgtgcatcaacagatgaagggataaagaaaatgtagtacatgtacacaatggagtactcttcagccatgaaaaacaataagattctgtcacttgcaacaacgtggatggaactagggaacattatgttaagtacaatgagccaggcacagaa----agactttgcatgttctcacacatttgtgggagctaaaaattaaaacaattgaactcatcaagatggagagtagactgagagtttccagaggctgggaagagtagcggtgttacgggatctttggagtgtcacttttctggacagaaacctctatggctggtggcacctttacctgagttttgcttgggcc-------------ccgcccacttagcctggcaggctgtgctcagctcatgctaccaggttggatcccatgtttgccaagggagactgcgtggagtggcaaggggtgtgtgagcaagcatggggtctggccactgtgcagtcagacttcctggctgctgcagtggggcaggtagctccaggtgccaacatgggtgccagctctccacaagtctgtggctggaccatgggcaccgcaagcagcttccacagctggcacactgggaacacagtggcacccggaagcttggagataccaggaaccacagggccccaaatagggaatcacagccctggctcggggagctcccaggtctgggcttcccaaagggtcacagctcttgtttccttctctttgcccacaatgtggcaagcaagggggcatgactcagccctgtttgtgttacagctctttcagcctcTTCCCTAGGATTTGTCATAATTAATTCTCATATTGTCTTATTTTTTTACATTTGTTTCAACTTCAGAAGATGCATGGATCTAAACACAACATAATGTGTTAGCTAGCTGCCATATGAATTTCTCCGTGTTTCACCACTATGCAGCCTAAAGTTATTCCGTCATCCATGACTATCCTGGCTAAAGAGTCTAAAGATCTTTGTTTGGTAGCTATGGCTTCAGCTAGTTCATTCGCTAATTTACCTAGAGTGGTTGACAGATTTCTAATTATACGTTCATGAGAGGTTACTCCCCACCATTACAAGTGACTTCTGCCAAACATTGGCCAAAATTCACCTCCTTGGTTTGCAGGTATGGTTTGTCTAATCCTGGAAAGTAATTTCGATGAACTACTTCAGTGTTCAGAAACATTGGAGTTATAAATAGAAAGAGGAAGAGTCACATAACCTAATTGACAATTATTTCTCATATGCCAGCGGTCAACACATTCATAAGCCCATGGGTGGTTGATCCAGGGACCACACAGCGTTCCTGACAGACTCTGAAAGTTAAGGCTTTGGTTTACTGGTAACAGAGACAGGTTAAAGTACATGTCTTCAGTCTTGAGTAGAGTGTAATCAGTCTCATTTTTTTTT-------------------------------------------------------------------------------------------A s panTro4.chr3 77176372 4064 + 202329955 aaaagaccattcatcatgtctaagtgggatttatcccgaggatgccaac--atggttcaacatatgcaaatcaatcaatgtgacacaccatatcaacagaatgaaggacaaaaaccatatgataatttcaattggtgctgaaaagcatttaataaaatccaacatccctgtgataaaaagaaaccctcaaaaaaaactagatatagaaggaacataccacaacacaataaaaaccatatgcaacagacccacagccagtatcatcctgaacagggaaaagctgaaagcctttcttcta--------agatctggaacaagacaagaatgtccacttccaacactgttactcaacatagtactggaagtcctagctagagcaattcagacaagagagaaacaataaaa-----------------------gggatccaaattggaaagaagtaaaattattactgttttcttgtttgcagatgatttgatcttatatttggaaaaacctaaggactccaccaaaaaactattagaactgatcaaaaaattcagagtcacaggatacaaaatcaaactacaaaagtcggtagcatttctaaatgacaaaaatgaacaatctaaagaagaaaatcaagaatgtaatcccatttataatagctacaaataaaataaaatatctgggaacaaacataacagaagaagtgaaagatctctacaatgaaaactataaaacatcgatgcaaaaaaattaaagaggacaccaaaaaaaaatggaaagatagtccatgttcattgattggaagagtaaatattgttaaaatacccatacttcacaaagcaatctacagattcaatgcaatctctattgaaataccaataacactcttcacagaaatag--aaaaaaaatcctaaaatttatacgaaaccataaaagacccagaataccgaaagccatcctgagcaaaaagaacaaaactggaagaatcacatcacctgactttaaattatagtacagagcaattgtaaacaaaacagcatggtactggcataaaacagacacatagaccaatggaacagaatagagaacccagaaataaatccatacatttacaattaactcattttcaatgaaggtgccaagaatatacatgggggagaggacagtctcttcaacaaattttgctgggaaaactagatattcattggcagaa-attttttttttttttttt----tttgagatggagtctagctctgttgctcaggctggagtgcagtggcgtgatctgggctcactgcaagctccacctcctgggttcacaccattctcctcctcagcctcccaagtagctgggagtacaggcgcccgccaccatgcctggcta------------------aatttttgtttgtatttttagtagagacggagtttcaccgtgttagtcaggatggtctcgatctcctgccctcatgatccacccacctcggcatcccaaagtcattggcagaataattaaactagaaccctctcttgcactatatacaaaaatcaaatccaaatgggtt----aaagacttaaatcaaagacacgaaactgctgaaagaaaacattagggaaactcaccaggaaattggtctgggcacagatttcttgagtaatactccaaaagctcaggcaaccaaagcaaaaatgaacaagtggtatcacatcaagttcaaagttttctgcatagtaaagaaaacaatgggcaaagtgaaaagacaatccacagaatggaagaaaatattttcaaactatatatctgacaagggattaataaccagaatatataaggagctcaaacaactctataag-aaaaaaactaacaatccaattatttaaatgggcaaaagatctgaacagacatttctcaaaagaaggcacacagctcaggtgcagtggctcacacctgtaattccagcactttggggagccaagacaggtggaccacttgagcccaggagttcaagaccaaactgaacaacatagcaaataattttaaaaactacctgggcatggtgatgcatgcctgtggtcccagctactcaggaggctgaggtgggaggattgcttgaaccctggcagtcaacactacattaagccatgatcatactactgctctccagcctgggtgacagagtgagaccctgtctc-aaaaaatgagcaaaaacaaaaaagaagatacataaatgtcaaatagggatatgaaaagatgctcaatatcattgatcatcagagaacttgaaatcaaaactacaacaagatatcatctta-ccccattaaaatggcttttatgcaaaagacaggcaataacaaatgcttgcaagaacgtggggaaaagggaacactcttactctgttggtgggaaggtaaattagtacattcactatggagaacaatatggaggtccctcaaaaaattaaaaatagaactatcatatgatccagcaatcccactgctgagtatatacccaagagagggaaaattagtatatcaaagagatatctgcattcccatatttatttcagcattattcataatagccaagatttggaagcaacctaagtgtgcatcaacagatgaagggataaagaaaatgtagtacatatacacaatggagtactcttcggccatgaaaaagaataagattctgtcatttgcaacaacatggatggaactaaaggatattatgttaagtacaatgagccaggcacagaaagacagactttgcatgttctcactcatttgtgggagctaaaaattaaaacaattgaactcatcaagatagagagtagactgagagtttccagaggctgggaagagtagcggtgttacgggatctttggagtgttacttttctggacagaaacctctatggctggtggcacctttgcctgcattttgc-tgggcc-------------ccgcccactcagcctggcaggctgtgctcagctcatgctaccaggttggatcccatgcctgccaagggagactgcatggagtggcaaggggtgtgtgagtgagcatggggtctggccactgtgcagtcagacttgctggctgctgcagtggggcaggtggctccaggtgccaacacgggtgccagctctccacaaggctgtggctggaccacgggcaccgcaagcagcttccacagctggcacactgggaacacagtggcacccagaagcttggagataccaggaaccacagggccctaaagagggaatcacagccctggctcggggagctcccaggtctgggctccccaaagggccacagctcttctttccttctctttgcccacaatgtggcgagcaa-ggggcatgtctcagccctgcttgtgttacagctctttcagcctcTTCCCTAGGATTTGTCATAATTAATTCCCATATCGTCTTATTTTTTTACATGTGTTTCAACTTCAGAAGATGTATGGATCTAAACACAACATGATGTGTTAGCTAGCTTCCATATGAGTTTCTCCCTGTTTCACCACTATGTAGCCTAAAGTTATTCCGTCATCCATGACTATCCTGGCTAAAGAGTCTGAAGATCTTTATTTGGTAGCTATGGCTTCAGCTAGTTCATTTGCTAAGTTACCTAGAGTGGTTGACAGATTTCTAATTATACGTTCATGAGAGGTTACTCCCCACCATTGCAAGAGACTTCTGCCAAACATAGGCCAAAATTCATCTCCTTGGTTTGCAGGTACGGTTTGTCTAATCCTGGAAAATAATTTCGATGAACTACTTCAGCGTTCAGAAACATTGGAGTTATAAATAGAAAGAGGAAGAGCCACATAACCTAATAGACAATTACCTCTCATATGCCAGTGGTCAACACATTCATAAGCCCATGGGTGCTTGATCCAGGGACCACACAGGTTCCCTGACGGATTCTGAAATTTAAGGCTTTGGTTTACTGGTAAAAGAGACAGGTTAAAGTACATGTCTTCAGTCTTGAGTAGAGTGTAATCAGTCTGATTTTTTTTT---TTAATGAGATGAACATCAGGTAAAGACCTTGACAAGAAGGAACAGAAATCCCGAGATTCTATAATCATAATAATCAAATTGTAATTGCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42346431 4041 + 202140232 aaaagactattcatcatgtctaagtgggatttatcccaagtatgccagc--atggttcaacatatgtaaatcaatcattgtgacacatcatatcaacagaatgaaggacaaaaaccatatgataatttcaaccgatgctgaaaagcatttaataaaatccaacatccctatgataaaaagaaaccctcaaaaaaaactagatatagaaggaacatgccacaacacaataaaaaccatatacaacagacccacagccagtatcatcctgaacagggaaaaactgaaagcgattcttcta--------agatctggaacaagacaagaatgtccgcttccaacactgttactcaacatagtactggaagtcctagttagagaaattcagacaagagaaaaacaataaag-----------------------ggcatccacattggaaagaagtgaaattattattgttttctcatttgcagatgatttgatcttatatttggaaaaacctaaggactccaccaaaaaactattagaactgatcaataaattcagagtcacagaatacaaaatcaagctacaaaaatcagtagcatttctaaatgccaaaaatgaacaatctaaagaagaaaatcaagaaagtaatcccatttacaatagctacaaataaaataaaatatctaggaataaacataataaaagaagtgaaagatctctacagtgaaaactataaaacaccgatgcaaaaaaattaaagaggacacc--aaaaaaatggaaaggtagtccgtgttcattgattagaagagtaaatattgttaaaatacccatacttcacaaagcaatctacagattcaatgcaatctctattgaaatactaataacactctttacagaaatag--aaaaaaaatcctaaaatttatatgaaaccataaaagacccagaatacccaaagctgtcctgagcaaaaagaacaaaactggaagaatcacattacctgactttaaattacactacagagcaattgtaaacaaaacagcatggtactggcataaaacagacacaaagaccaatggaacagaatcgagaacccagaaataaatccatacgtttacaactaactcattttcaatgaaggtgccaagaatatacatgggggagaggacagtctcttcaacaaattatgctggggaaactggatattcattggcagaa--ttttttttttttttttt----tttgagatggagtctcgctctgtt----------------agtggcacgatctgggctcatggcaagctccacctcccaggctcatgccattctcctcctcagcctcccaggtagctgggactacaggcacctaccaccatgcctggcta-------------------atttttttttgtatttttagtagagatggagtttcaccatgttagctaggatggtctcgatctcctgccttcatgatccgcacgcctcggcctcccaaagtcattggcagaataattaaactagaaccctctcttgtgatatatacaaaaatcaaatccaaatggagt----aaagacttaaatcaaagacaggaaactactgaaataaaacattagggaaactctccaggaaatcagtctgggcacagatttcttgagtaatactccaaaagctcaggcaaccaaagcaaaaatgaacaagtggtatcagatcaagttcaaaagcttctgcatagtaaagaaaacaatggacaaagtgaaaagacaatccacagaatggaataaaatatttgcaaactatatatctgacaagggattaataaccagaatatataaggagctcaaacaactctgtaag-aaaaaaactaataatccaattatttaaatgggc-aaagatctgaatagacatttctcaaaagaagacatacaggtcaggcacggtggctcacacctgtaattccagcacttttggaagccaaggcaggtggaccacttgagcccaggagttcaagaccaacctgaacaacatagcaaataattttaaaaactacttgggcacggtgatgcatgcctgtggtcccagctactcaggaggctgaggtgggaggattgcttgaaccctggcagtcaaaactacagtaagccatgatcatgccactgcactccagcctgggtgacagagtgagaccatgtctcaaaaaaacaagcaaaaacaaaaagaaagatatataagtgtcatataggtatatgaaaagatgctcaatatcattgatcatcagagaaattcaaatcaaaaatacaataaaatatcatctca-ccccattaaaattgtctttatccaaaagacaggcaataacaaatgcttgcaagaacatggagaaaagggaaccctcttactctgttggtgggaatgtaaattagtacattcactatggagaacaatatggaggtccctcaaaaaattaaaaatagaactatcatatgatccagtaatcccactgctggatatatatcctagggagggaaaattagtgtatcaaagagatatctgcattcccatatttatttcagccctattcataatagccaagatttagaagcaacctaaatgtgcatcaacagatgaagggataaagaaaatgtagtacatatacacaatggagtactcttcagccatgaaaaagtataagatgttgtcatgtgcaacaacatggatggaactagaggacgttacgttaagtgcaataaggcaggcacagaaagacagactttgcatgttctcactcatctgtgggagctaaaaattaaaacaattgaactcatcaagatagagagtagactgagagtttccagaggctgggaagagtagtggtgttatgggatatttggagtgtcacttttctgaacagaaacctctatggctggtggtacctttgcctgagttttct-tgggcc-------------ccgcccactcaacctggcaggctgtgctcagctcatgctaccaggttggatcccatgcctgccaagggagactgcatggagtggcaaggggtgcgtgagcgagcatggggtctggccactgtgcagtcagacttgctggctgctgcagtggggcaggtagctccaggtgccaacatgggtgccagctctccacaaggctgtgactggaccatgggcactgcaagcagcttccacagctggcacactgggaacacagtgacacccagaatcttggagatacaagaaaccacagggccccaaagagggaatcacagccctggctcggggagctcccagatatggactccccaaggggccacagctcttctttccttctctttgcccacagtgtggcgagcaa-ggggcatgtctcagccctg--tgtgttacagctctttcagcctcTTCCCTAGGATTTGTCATAATTAATTCCCATATCATCTTATTTTTTTACATGTGTTTCAACTTCAGAAGATGTATGGACCTAAACACAGCATGATGTGTTAGCTAGCTGCCATACGAATTTCTCCCTGTTTCAGCACTCTGTAGCCTAAAGTTATTCCATCATCCACGACTATCCTGGCTAAAGAGTCTAAAGATC----TTTGGTAGCTATGGCTTCAGCTAGTTCATTTTCTAAGTTACCTAGAGTGGTTGACAGATTTCTAATTATACGTTCATGAGCGGTTACTGCCCACCATTGAAAGAGACTTCTGCCAAACATAGGCCAAAATCCATCTCCTTGGTTTGCAGGTACGATTTGTCTAATCCTGGAAAATAATTTCGATGAACTAGTTCAGTGTTCAGAAACCGTGGAGTTATAAATAGAAAGAGGAAGAGCCACATAACCTAATAGAAAATTACCTCTCATATGCAAGAGGTCAACACATTCATAAGCCCATGGGTGGTTGATCCAGGGACCACACATGGTCCCTGACAGGTTCTGAAAGTTAAGGCTTTGGTTTACTGGTAACAGAGACAGGTTAAAGTACATGTCTTCAGTCTTGAGTAGAATGTAATCAGTCTGATTTTTTTTTTTTTTAATGAGACAAATATCAGGTAAAGATCTTGACAAGAAGGAAGAGAAATTCTGAGATTCTATAGTCATAATAATCAAATTGCAATTGCT i ponAbe2.chr3 I 1474 C 0 s macFas5.chr5_KE145639_random 62291 4092 - 87690 aaaagaccattcatcatgtctaagtgggatttatcccaaggatggcagcaaatggttcaacacatgtcaatcaatcagtgtgacacatcacatcaacagaatgaaggacaaaaaccgtatgataatttcaattgatgctg-aaagcttttaataaaatccaacatccctatgataaaaagaaaccctt-aaaaaaactagacatagaaggaacataccacagcacaataaaaaccatatgcagcagacccacagccagtatcatcccgaacagggaaaaactgaaagccttccttctggaagaggaagatctggaacaagacaagaatgtccacttccaacactgttactcaacatagtactggaagtcctagctacagcaattcagacaagagaagaacaataaaaagaaagaagtaaaattggaaattggaatccaaatttgaaagaagtaaaatgattatttttttcttgtttgcaaatgatttgatcttatatttggaaaaacctaaggactccaccaaaaaactattagaactgatcaacaaattcagagtcacagg-----agatcaaactacaaaaatcagtagcatttcttaatgccaaaaatgaacaatctaaaaaaaaaaatcaaggaagtaatcccatttacaatagctacaaatgaaataaaatatctaggaataaacgtaacaaaagaagtgaaagatctctacaatgaaaactataaaacactgatgcaaaaaaattgaagaggacacc--aaaaaaatggaaagatagtccgtattccttgattggaagagtaaatattgttaaaatacccagacttcacaaagcaatctacagattcaatgcaatccctattgaaatactaataacactcttcacagaaatagaaaaaaaaaatcctaaaatttatatgaaaccataaaagacccagaata-ccaaagctgtcctgagcaaaaagaacaaaactgcaaggatcacattacctgactttaaattatactacagagcaattgtaaacaaaatagcatggtactgccataaaacagacacatagaccaatggaacagaata-agaacccagaaataaatccatacgtttacaactaactcattttcaatgaaggtgccaagaatatacatgggggagaggacaatctcttcaataaattgtgctgggaaaactggatattcattggcagaataatttttttttttttttt----tttgagacagagtctcactctgttgcccaggctggagtgcagtggcgccatctgggctcactgcaagctccacctctcgggttcaagccattctcctcctcagcctcccaagtagctgggactacaggcgcccgccagcacacccagctaattt--------tgtgtgtgtgtgtgtgtttttttttagtaaagacggagtttcaccatgttagccaggatggtctccatcccctgccctcatgatccgcccacctcggcctcccaaagtcatcggcagaataattaaactagaaccctctctcgccctgtatacaaaaatcaaatccaaatggattaaagaaagacttaaatcaaagacatgagtctactgaaagaaaacatta-ggaaactctccaggaaattggtctgggcatggatttcttgagtcatactccaaaacctcaggcaaccaaagcaataatgaacaagtggtatcacatcaagttcaaaagcttctgcatagtaaagaaaacaa-----aacgtgaaaagaaaattcacagaatggaagaaaatatttgcaaac--tatatctgataagggattagtaaccagaatatataaggagctcaaacaactctataag-aaaaaaactaataatccaattatttaaatgggcaaaagatctgaatagacatttctcaaaagaaggcatacaggtcaggcgcagtggctcacacctgtaattccagcactttgaggagccaaggcaggtggaccccttgagcccaggagttcaagaccaacctgaacaacatagcaaagaatttttaaaactccctgggcatggtgatgtatgcctgcagtcccagctactcaggaggctgaggtgggaggattgcttgagccctggcagtcaaaactacagtaagccatgatcatgccactgcactccaacctgggtgacagagtgagaccctgtctc-agaaaacaagcaaaaacaaaaaagaagatatataaatgtcaaacaggtatatgaaaagatgctcaatatcattgatcatcagagaaattcaaaccaaaactacaatgagataccatctca-ccccattaaaatggcttttatccgaaagacaggcaacagcaaatgcttgc-agaatg-ggagaaaagggagccctcttactctgttggtgggaacataagtcggtacattcactgtggagaacaatatggaggtccctcaaaaaattaaaaatagggctatcatatgatccagcaatcccactgctgggtatatacccaagggagggaaaattagtatatcaaagagatatgtgcattcctatatttatttcagcactattcataatagccaagatttggaagcaacctaagtgtgccccaacagatgaagggataaagaaaatgtgggacatatacacaatggagtactctccagccatgaaaaagaataagaccccgtcatttgcaacaacatggatggaactagaggacagtatgttaagtacaatgagccaggcacagaaagacagactttgcatgttctcactcatttgtaggagccgaaaattaaaacaattgaactcatcaagacagagagtagaaagagagtttccagaggctgggaagagtagtggtgttatgggatctttggggtgtcacttttctggacaaaaacctctacggctggtggcaccttggcctgggttttgcttgggcctactgggctcattctgcccactcagcctggcaggctgtgctcagctcatgctaccaggtcggatcccatgcctgccaagggagactacgtggagtggcaagggggttgtgagcacgcatggggtgtggccactgtgcagtcagacctgctggctgctgcagtggggcaggtagctccaggtggcaacacgggcgccagctctccacaaggctgtggctggaccaggggcactgcaaacagcttctgcagctggcatgctgggaacacagtagcacccagacgcttggagataccaggaaccacagggccccaaagagggaatcacagccctggctgggggagctcccaggtctgggctccccaaaggaccgcagctcttcttgccttctctttgcccacaatgtggcgagcaa-ggggcatgtctcagccctgtttgtgttacagctctttcagcctcTTCCCCAGGATTTGTCGTAATTAATTCACGTGTCGCC--------TTACATGTGTTTCAGTTTCAGAAGACGTATGGGTCTAAACACAACATGATATGTTAGCTAGCTGCCATATGAATTTCTCCCGGTTCCACCACTCTGTAGCCTAAAGTTATTCTGTCATCCATGACTATCCTGGCTCAAGAGTCTAAACATATTTGTTTGGTAGCTATGGCTTCAGCAACTTCATTTGCTAAGTTACCTAGAGTGGTTGACagatttctaattatacgttcatgagaggttactccccaccattgcaagagacttctcccaaacataggccaaaatccatctccttggtttgcaggtacagtttgtctaatcctggaaagtaattttgatgaactagttcagtttccaataaCAATGGAGT------TAGAAAGAGGGAGAGCCACATAACCTACTAGACAATCACCTCTCATATGCCAGCTGTCAGCACATTCATAAGCCCATGGGTGGTTGATCCAGGGACCACACAGGGTCCCTGACAGATTCTGAAAGTTAAGGCTTTGGTTTACTGGTAACAGAGACAGGTTAAAGTACATGTCTTCAGTCTTGAGTAGAGTGTAATCAGTCTGATTTCTTTTT----TAATGAGACAAACATCTGGTGAAGACCTTGACAAGAAGGAAGAGAAAACCCGAAATTCTATAATCATAATAATAGAATTGTAATTGCT i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 41027 4079 + 231459 AAAAGACCATTCATCATGtctaagtgggatttatcccaaggaTGGCAGCAAATGGTTCAACACATGtcaatcaatcagtgtgatacatcacatcaacagaatgaaggacaaaaaccatatgatgttttcaattgatgctg-aaagcttttaataaaatccaacatccctatGATAAAAAGAAACCCTT-aaaaaaaCTAgacatagaaggaacataccacagcacaataaaaaccATATGCAGcagacccacagccagtatcatcccgaacagggaaaaactgaaagccttccttctg--------agatctggaacaagataagaatgtccacttccaacactgttactcaacatagtactggaagtcctagctacagCAATTCAGACAAGAGAAgaacaataaaaggaaagaagtaaaattggaAATTGGAATCCAAATTTGAAAGaagtaaaatgattatttttttcttgtttgcagatgatttgatcttatatttggaaaaacctaaggactccaccaaaaaactattagaactgatcaaCAAATTCAGAGTCACAGG-----AAatcaaactacaaaaatcagtagcatttcttaaTGCCAaaaatgaacaatct-aaaaaaaaaatcaaggaagtaatcccatttacaatagctacaaatgaaataaaa----taggaataaacgtaataaatgaagtgaaagatctctacaatgaaaactataaaacagtgatgcaaaaaaattgaagaggacacc--aaaaaaatggaaagatagtcCGTATTCCTTGATTGGAAgagtaaatattgttaaaatacccacacttcacaaagcaatctacagattcaatgcaatccctattgaAATACTAATAacactcttcacagaaatagaaaaaaaaaatcctaaaatttatatgaaaccataaaagacccagaataccCAAAGctgtcctgagcaaaaagaacaaaactgcaaggatcacattacctgactttaaattatactacagagcaaTTGTaaacaaaatagcatggtactgccataaaacagacacatagaccaatggaacagaatagagaacccagaaataaatccatacatttacAACTAACTCATTTTCAAtgaaggtgccaagaatatacatggGGGagaggacaatctcttcaataaattgtgctgggaaaactggatattcattggcagaataatctttttttttttttttttatttgagacggagtctcactctgttgcccaggctggagtgcagtggcgccatctgggctcactgcaagctccacctctcgggttcaagccattctcctcctcagcctcccaagtagctgggactacaggcgcccgccagcacacccagctaattttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtttagtaaagacggagtttcaccatgttagctaggatggtctcgatcccctgccctcatgatccgcccacctcagcctcccaaagtcattGGCAGAATAATTAAACTAGAACCCTCTCTTGccctgtatacaaaaatcaaatccaaatggatt----aaagacttaaatcaaaGACATGAgtctactgaaagaaaacattagggaaactctccaggaaatTGGTCTGGGCATGGATTTCTTGAGTCATACTCCAAAACCTCAGGCAACCAAAGCAATAATGAACAAGTGGTATCACATCAAGttcaaaagcttctgcatagtaaagaaaacaa-----aacgtgaaaagaaaatccacagaatggaagaaaatatttgcaaactatatatctgataagggattagtaaccagaatatataaggagctcaaacaactctataagaaaaaaaacttataatCCAATTATTT-----------AGatctgaatggacatttctcaaaagaaggcatacaggtcaggcgcagtggctcacacctgtaattccagcactttgaggagccaaggcaggtggaccccttgagcccaggagttcaagaccaacctgaacaacatagcaaagaattttaaaaactccctgggcatggtgatgtatgcctgcagtcccagctactcaggaggctgaggtgggaggattgcttgagccctggcaGTCAAAACTACAGTacgccatgatcatgccattgcactccaacctgggtgacagagtgagaccctgtctc-agaaaacaagcaaaaacaaaaaagaagatatataaatgtcaaataggtatatgaaaagatgctcaatatcattgatcatcagagaaattcaaaccaaaactacaatgagataccatctca-ccccattaaaatggcttttatccgaAAGACAGGCAACAGCAAATgcttgc-agaatg-ggagaaaagggagccctcttactctgttggtgggaacatAAGTCGGTACATTCACTGTGGAGAACAATATGGAGgtccctcaaaaaattaaaaatagggctatcatatgatccagcaatcccactgctgggtatatacccaagggagggaaaattagtatatcaaagagatatgtgcattcctatatttatttcagcactattcataatagccaagatttggaagcaacctaagtgtgcCCCAACAgatgaagggataaagaaaatgtgggacatatacacaatggagtactctccagccatgaaaaagaataagaccccatcatttgcaacaacatggatggaactggaggacattatgttaagtacaatgagccaggcacagaaagacagactttgcatgttctcactcatttgtagGAGccgaaaattaaaacaattgaactcatcaAGACAGAGAGTAGAA--AGAGTTTCCAGAGGCTAGGAAGAGTAGCGGTGTTatgggatctttggggtgtcacTTTTCTGGACAAAAACCTCTATGGCTGGTGGCACCTTGGCCTGGGTTTTGCTTGGGCCTactgggctcattctgcccactcagcctggcaggctgtgctcagctcGTGCTACCAGGTcagatcccatgcctgccaagggagACTACGTGGAGTGGCAAGGGGGTTGTGAGTGCGCAtggggtctggccactgtgcAGTCAGACCTGCTGGCTGCTGCAGTGGGGCAGGTAGCTCCAGGTGCCAACACGGGCGCCAGCTCTCCacaaggctgtggctggaccaggggCACTGCAAACAGCTTCTGCAGCTGGCATGCTGGGAACACAGTAGCACCCAGACGCTTGGAGATACCAGGAACCACAGGGCCCCAAAGAGGGAATCACAGCCCTGGCTGggggagctcccaggtctgggctccccaaagggccGCAGctcttcctgccttctctttGCCCACAATGTGGCGAGCAA-GGGGCATgtctcagccctgtttgtgttacagctctctCAGCCTCTTCCCCAGGATTTGTCGTAATTAATTCACGTGTCGCT--------TTACATGTGTTTCAGTTTCAGAAGACGTATGGGTCTAAACACAACATGATACGTTAGCTAGCTGCCCTATGAATTTCTCCCGGTTCCATCACTCTGTAGCCCAAAGTTATTCTGTCATCCGTGACTATCCTGGCTCAAGAGTCTAAAGATATTTGTTTGGTAGCTATGGCTTCAGCAACTTCATTTGCTAAGTTACCTAGAGTGGTTGACGGATTTCTAATTATAAGTTCATGAGAGGTTACTCCCCACCATTGCAAGAGACTTCTCCCAAACATAGGCCAAAATCCGTCTCCTTGGTTTGCAGGTACAGTTTGTCTAATCCTGGAAAGTAATTTTGATGAACTAGTTCAGTGTTCAATAACATTGGAGT------TAGAAAGAGGGAGAGCCACATAACCTACTAGACAATCACCTCTCATATGCCAGCTGTCAGCACATTCGTAAGCCCATGGGTGGTTGATCTAGGGACCACACAGGGTCTCTGACAGATTCTGAAAGTTAACGCTTTGGTTTACT-GTAACAGAGACAGGTTAAAGTATGTGTCTTCAGTCTTGAGTAGAGCGTAatcagtctgattttttttt----taatgagacaaacATCAGGTGAAGACCTTgacaagaaggaagagaaaacctGAAATTCTATAATCATAATAATAGAATTGTAATTGCT i papAnu2.JH684932 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e panPan1.JH650567 939 34608 + 44305 I a score=9555.000000 s hg38.chrUn_GL000218v1 105220 8 + 161147 AGTTTAAG s panTro4.chr3 77180436 8 + 202329955 AGTTTAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42350472 8 + 202140232 AGTTTAAG i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 66383 8 - 87690 AGTTTAAG i macFas5.chr5_KE145639_random C 0 C 0 s papAnu2.JH684932 45106 8 + 231459 AGTTTAAG i papAnu2.JH684932 C 0 C 0 s tarSyr2.KE934811v1 109817 8 - 149492 agttggag i tarSyr2.KE934811v1 N 0 N 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e panPan1.JH650567 939 34608 + 44305 I a score=1585098.000000 s hg38.chrUn_GL000218v1 105228 1961 + 161147 TAGTCCTTCAAAAATACATCTCATTCCTGACAGGATAAAACAAGTTTtaaaaaatatattatattcagattcactagggaacacttggagccaggaaataattcaggattcagcccaaattataggcaaataataaaaactctaaaacaatgatcagggttggaatctaatagcatatgtcatagttttcttttggaacataaattt--tctctctagtccatca-ttttatcaaagacaaatcatagtaggaccaattttgtatgcaaaataagttttagtcttatcataccgggcctgattatttccataaagggcagcaagaatatttattggccatataggcttcttaaaattggctttgttggaaatttttaatgaggaatcttagacttttaagagccttgaagctagccaagtcaaagatttg-catcagactgtgtctgtaataA--TTTTTT---AACCTACttttt-aaaattatactttaagttctggggtacatgtgcagaacgtgcaggtttgttacataggtatatatattctgcggtggtttgctg----cacccatcaacccatcacctatattaggcatttctcctaatgctatccctctccctgcccccaccccctaacaggccccagtgtgtgatgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgtggtgtttggttttctgttcttgtgttagtttgctgagaatgatggattccagcttcttccatgtccctgcaaaggacatgaactcatcgttttttatggctgcatagtattccatggtgtatatgtgccacattttctttattcaatctatcattgatgggcatttgggttggttccaagtctttgttattgtgaacagtcctgcaataaacatacatgtg--catgtgtctttatagtagaatgatttataatcctttgggtatatacccagtaatgggattgctgggccaaacggtatttctagctctagatccttgaggaatagccacactgtcttccacaatggttgaactaatttacactcccac-----caacagtgtaaaagccttcctatttctccacactctctccagtatttgttgtttcctgactctttaattttcaccattctaactggcatgagat-gtatctcattgtggttttgatttgcatttctctaatgactagtgatgatgagctttttt--ataagtttgttggttgcataattgtcctcttttgagaagtgtctgttcacatcctttgcccgcttttcaatgggg----ttgttttatcttgcaaatttgtttaagttctttgtagattctggatattagccctttgtcagatggatagactgcaaaaattttctcccattttgtaggttgcccgttcactctgatagtttcttttgctgtccagaaactctttagtttaattaggtcccatttgtcaattttggcttttgttgcctttgtttttggtgttttagtcatgaagtctttgcccatgcctatgtcctgaatggtattgcctaggttttcctctacggtttttatggctttaggtcttatgtttaagtctttaacccaccttgagttaatttttgcataaggtgtaaggaagggatccagtttcagctttctgcctatggctagccagttttcccaacaccatttattaaatagggaatcctttccccagcgctcgtttttctcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcctctgttctgttcctttgatctatatatctg-ttttcgtaccagtaccatgctgttttggttaccatag-cttgtagtatagtttgaagtcaggtggtatgatgcttccagct---ttgttctttttggttaggattgtcttggctattcgggctcttttttgattccatatgaaatttaaagta s panTro4.chr3 77180444 1970 + 202329955 TAGTCCTTCAAAAATACATCTCATTCCTGACAGGAAAAAGCAAGTTTTTAAAAATATGTTATATCTGGGTTAACTAGGGAACacttggagccaggaaataattcaggattcagcccaaattataggcaaataataaaaactcggaaacaatgatcagggctggaatctaataacatatgtcatagttttcttttggaacataaattttctctctctagtccatca-ttttatcaaagacaaatcatagtaggacaaa-tacgtgtgcaaaataagttttagtcttatcatgcctggtctgattatttgcataaagtgcagtaagaatatttattgaccatataggcttcttaaaattggctttgttggaactttttaataaggaatcttagacttttaaaagccttgaggctagccaagtcaaagatttg-catcagactgtgtctgtaatacttTTTTTT---AACCTACttttt-tttattatactttaagttctggggtacacgtgcagaacgtgcaggtttgttacataggtatacatgtgctgtggtggtttgctg----cacccatcaacccatcacctatattaggtatttgtcctaatgctatccctccccccgcccccaccccccaacacgccccagtgtgtgatgttcccctccctgtgtccatgtgttctcgttgttcaactcccacttatgagtgagaacatgtggtgttttgttttctgttcttgtgttagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaacttatccttttttatggctgcatagtattccatggtgtatatgtgccacattttctttatccagtctataattgataggcatttgggttggttccaagtctttgttattgtgaacagtcctgcaataaacatacgtgtg--catgtgtctttatggtagaatgatttataatcctttgggtatatatccagtaatgggattgctgggccaaatgatatttctagttctaggtccttgaggaatagccacactgtcttccacaatggttgaactaagttaccctcccac-----caatagtgtaaaagcattcctatttctccacaccctctccagtatctgttgtttcctgactttttaatgatcgccattctaactggcatgagatggtatctcattgcggttttgatttgcatttctctaatgactcatgatgatgagctttttttcatatgtttgttggttgcataattgtcctcttttaagaagtgtctgttcacatcctttgcccactttttgataggatt-tttttttttttttgtaaatttgtttaagttctttgtagattctggatattagccctttgtcagatggatagattgcaaaaattttgtcccattttgtaggttg-ccattcactctcatagtttcttttgctgtccagaagctctttagtttaattaggtcccatttgtcaattttggcttttgttgccattgtttttggtgttttagtcatgaagtctttgcccatgcctatgtcctgaatggtattgcctaggttttcctctagggtttttatggctttaggtcttaggtttaagtctttaatccatcttgagttaatttttatataaggtgtaaggaagggatccactttcagcttcctgcccaaggctagccagttttcccaacaccatttattaaatagggattcctttccccagtgcttgtttttctcaggtttgtcaaagatcagatggctgtagatgtgtggtgttattcctgagggttctgttctgttcctttgatctatatatcta-ttttggtaccagtaccatgctgttttggttaccgtagccttgtagtatagtttgaagtcaggtagcatgatgcttccagct---ttgttctttttgcttaggattgtcttggctatttgggttcttttttgattccatatgaaatttaaagta i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42350480 1963 + 202140232 TAGTCCTTCAAAAATACATCTCATTCCTGACAGGATAAAACAAGTTTTTAAAA------TATATCCAG-TTCACTAGGggatacttggagccaggaaataattcaggattcagcccaaattataggcatataataaaaactcagaaacaatgatcagggttggaatctaatagcgtatgtcatagttttcttttggaacataaattttctctctctagtccctcatttttatcgaagacaaatcacagtaggaccat-tttgtgtgcaaaataagttttagtcttatcatacctggcctgattatttgcataaagtgcagcaagaatatttattgaccacataggcttcttaaaattgactttgttgaaactttttaataaggaatcttagaattttaaaagccttgaggctagccaactcaaagatttgccatcagactgtgtctgtaatac-ttTTTTT---AACCTACttttt--ttattatactttaagttctggggtacatgtgcagaacgtgcaggtttattacataggtatacatgtgccatggtggtttgctg----cacccatcaacccatcacctatattaggtatttgtcctaatgctctccctccccccacccccaccctgcaacaggccccagtgtgtgatgctcccctccctgtgtccatgtgttttcattgttcgactcccacttataagtgagaacatgtggtgtttggttttctgttcttgtgttagtttgctgagaatgatggcttccagcttcatccatatccctgcaaaggatatgaactcatacttttttatggctgcacagtattccaaggtgtatatgtgccacattttctttatccagtctatcattgatgggcaattgggttggttccaagtctttgctattgtgaacagtcctgcagtaaacatacgtgtg--catgtgtctttacagtagaatgatttataatcctttgggtatatacccagtaatgggattgctgggccaaatggtatttctagttctagatccttgaggaatagccacactgtcttccacaatggttgaactaatttacactcccac-----caacagtgtaaaagcgttcctattcctccacaccctctccagtatctgttatttcctgac--tttaatgatcgccattctaactggcatgagatggtatctcattgtggttttgatttgcatttctctaatgactagtgatgatgagcatgttttcatatgtttgttggcagcataattgtcttcttttgagaagtgtctgttcacatcctttgcccactttttgatggggttgtttgttttttcttgtaaatttgtttaagttctttgtagattctggatattagtcctttgtcagacggatagattgcaaaaattttctcccattttgtaggttgcccattcactctgatagtttattttgctgaccagaagctctttagtttaattatgtcccatttgtcaattttggcttttgttgccattgtttttggtgttttagtcatgaagcctttgcccatgcctatgtcctgaatggtattgcctaggttttcctctagggtttttatggctttaggtcttacatttaagtctttaatccatcttgagttaatttgtgtataaggtgcaaggaagggatccagtttcagctttctgcctatggctagccagttttcccaacaccatttattaaatagggaatcttttctccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttttgaggcctctgttctattcctttgatctatatatctg-ttttggtaccagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcttccagct---ttgttctttttgcttaggattgtcttggctattcaggctctgttttgattacacatgaaatttaaagta i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 66391 1977 - 87690 CAGTCCTTCAAAAATACATCTCATTCCTGACAGGCTAAAACAAGTTTTTAAAA-TATATTATATCCAGGTTCACTAAGggacacttgaagccaggaaataattcaggattcagccaggatt-caggcaaataataaaaactgaaaaacaatgatcagggttggaatctaatagtatatgtcatcgttttcttttggaac-taaattttctctctctagtccctcatttttatcaaagacaaatcatagtaggaccaa-tgtgtgtgcaaaataagttttagtcttatcatacctggcctgattatttgcataaagtgcagcaagaatatttattggccatataggcttcttaaaattggctttgttggaactttttaataaggaatcttaggcttttaaaagcctcgaggctagccacatcaaagatttgccatcagactgtgtctgtaatac-ttTTTGTAAAAACCTACCttttttttattatactttaagttctggggtacatgtgcagaacgtgcaggtttgttacataggtatacatgtgccgtggtggtttgctgcacccacccatcaacccgtcacctatattaggtatttctcctaacgctatccctccccccacccccacctcccaataggccctggtgtgtgatgtttccctccctgtgtccatgtgttctcattgttcgactcccacttatgagtgagaacatgcggtctttgcttttctgttcttgtgttagtttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatctgtttttatggctgcatagtatttcatggtgtctatgtgccacattttgtttatccagtctatcattgatgggcatgtgggttggttccaagtctttgctgttgtgaacagtcctgcaataaacatacatgtg--catgtgtctttatagtagaatgatttataatcctttgggtatatacccagtaatgggattgctgggccaagtggtatttctagttctagatccttgaggaatctccacactgtcttccacaatggttgaactaatttacactcccac-----caacagtgtaaaagcattcctgtttctccacaccctctccagtatctgttgtttcctgactttttaatgatcgccattctaactggcatgagatggtatctcattgtggttttgatttgcatttctttaatgactagtgatgatgagcattttttcatatgtttgttggctgcataattgtcttcttttgagaagtgtctgttcacatcctttgcccactttttgatggg----gttgttttttcttgtaaatttgtttaagttctttgtagattctggatattagccctttgtcaaatggatagattgcaaaaatcttctcccattttgtaggttgcccgttcactctgatagttt-ttttgctgtccagaagctctttagtttaattaggtccgatttgtcaattttggcttttgttgccaatgtttttggtgttttagtcatgaagtctttgcccctgcctatgtcctaaatggtattgcctcggttttcctctagggtttttatggctttaggtcttacgtttaagtctttagtccatcttgagttaatttttgtataacgtgtaaggaagggatccagtttcagctttctgtctatggctagccagttttcccaacaccatttatcaaatagggaatcctttccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcttctgttctgttcctttgatctatatatctgtttttggtaccagtaccatcctgttttggttactatagccttgtagtataatttgaagtcaggtagcacgatgcttccagctttgttgttctttttgcttaggattgtcttggctattcaggctcttttttgattccatatgaaatttaaagta i macFas5.chr5_KE145639_random C 0 I 1 s papAnu2.JH684932 45114 1949 + 231459 CAGTCCTTCAAAAATACATCTCATTCCTGACAGgctaaaacaagtttttaaaa-tacattatatccAGGTTCACTAAGGGACACTTGGAGCCAGGAAATAATTCAGGATTCAGCCAGGATT-CAGGCaaataaaaaaaactcaaaaacaatgaTCAGGGTTGGAATCTAATAGTATATGTCATAGTTTTCTTTTGGAACATAAGTTTTCTCTCTCTAGTCCCTCATTTTTATCAAAGACAAATCATAGTAGGACCAA-TGTGT-----------------GTCTTAACATACCTGGCCTGATTATTTGAATAAAGTGCA----------------GCCATATAGGCTTCTTAAAATTGGCTTTGTTGGAACTTTTTAATAAGGAATCTTAGACTTTTAAAAGTCTCAAGGCTAGCCACGTCAAAGATTTGCCATCAGACTGTGTCTGTAATAC-TTTTTGTAAAAACCtaccttttttttattatactttaagttctggggtacatgtgcagaacgtgcaggtttgttacataggtatacatgtgccgtggtggtttgctgcacccacccatcaacccgtcacctatattaggtatttctcctaatgctatccctcccccaacccccacctcccaataggccctggtgtgtgatgttcccctccctgtgtccatgtgttctcattgttcaactcccacttatgagtgagaacatgtggtctttgctttcctgttcttgtgttag-ttgctgagaatgatggtttccagcttcatccatgtccctgcaaaggacatgaactcatctgtttttatggctgcatagtactccatggtgtctatgtgccacattttctttatccagtctatcactgatgggcatgtgggttggttccaagtctttgctgttgtgaacagtcctgcaataaacatacatgtgcacatgtgtatttatagtagaatgatttataatcctttgggtatatacccag-aatgggattgctgggccaagtggtatttctagttctagatccttgaggaatctccacactgtcttccacaatggttgaactaatttacactcccacagtgtaaaaagtgtaaaagcattcctgtttctccacaccctctccagtatctgttgtttcctgactttttaatgatcgccattctaactggcgtaagatggtatctcattgtggttttgatttgcatttctctaatgactagtgatgat---cattttttcatatgtttgttggctgcatagttgtcttcttttgagaagtgcctgttcacatcctttgcccactttttgatggggtt-gttgttttttcttgtaaatttgtttaagttctttgtagattctgaatattagccctttgtcagatggatagattgcaaaaattttctcccattttgtaggttgcccgttcactctgatagtttcttttgctgtccagaagctctttagtttaattaggtcccatttgtcaattttggcttttgttgccaatgtttttggtgttttagtcatgaagtctttgcccctgcctatgtcctgaatggtattgcctcagttttcctctagggtttttatggctttaggtcttacgtttaagtctttaatccatcttgagttaatttttgtataaggtgtaaggaagggatccagtctCAGctttctgcctatggctagccagttttcccaacaccgtttattaaatagggaatcctctccccattgcttgtttttgtcaggtttgtcaaagatcagatggttgtagatgtgtggtgttatttctgaggcttctgttctgttcctttgacctatatatctgtttttggtaccagtaccatgctgttttggttactatggccttgtagtatagtttgaagtcaggtagcacgacgcttccagctttgttgttctttttgctta-gattgtcttggctattcgggctcttttttgattccatatg-aatttaaagta i papAnu2.JH684932 C 0 I 5795 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e panPan1.JH650567 939 34608 + 44305 I a score=583782.000000 s hg38.chrUn_GL000218v1 107189 1212 + 161147 tatttttccaattccgtggagaaagtcaatggcagtttaatggggatagcagtgaatctataaattactttgggcagta-ggtcactttcacgatactgattcttcttatctatgagcatggaatgattttccatttgtttgtgtcctctcttatttccttgaggagtggtttgtagttctccttgaagaggtccttcacatccttgtaagttgtattcctaggtatttcattctttttatagcaatggtgaatgggagttcactcacagtttggctctctgtttgtctgttattgctgtataggaatgcttgtgatttttgcacattgattttgtatcctgaaactttgctgaagttgcttatcagattaaggagattttgggctgagatgatggggttttctaaatatacaatcatgtcatctgcaaagagaggccatttgactttctcttttcctaattgaataccctttatttctttctcttgcctgattgccctggccagaacttccaatactatgttgaataggagtagtgagagagggtatccttgtcttgtgctgattttcaaagggaatgcttccagtttttgcacattcagtatgttactggctgtgggtttgtcataaatagcacttattattttgagatacgttccatcaatacc-agtttattgagagtttttagcatgaaaggttgttgaattttgtcaaaggccctttctgcatctattgagataatcatgcagtttttgtcattggttccctttatgtgatggattacatttattgatttgcatatgttgaaccacccttgcatcccaggggtgaagccgacttgatcatggtggacaagctttttgatgtgctgctggattcagttttccagtattttattcaggatttctgcatcaatgttcatcagggatattggtctaaagttttctttttttgttgtgtccctgcgaggttttggtatcaaggtgatgctgacctcataaaatgagttagggaggattctctctttttctattgtttggaatagtttcagaaggaatggtacgagctcctctttgtacctctcgtagaattcggctgtgaatccatctggtcctggaatttttttggttggtaggcta-taattaatgcctcaatttcagaacttgttattggtctattcaggaatttcacttcttcctggtttagtcttggta---------------------------------------------------------------------- s panTro4.chr3 77182414 1211 + 202329955 tatttttccaattccatggagaaagtcaatggtagtttaatggggatagcagtgaatctataaattactttgggtagtatggccattttcacgatattgattcttcctatttatgagcatggaatgtttttccatttgtttgtgtcctctcttatttctttgaggagtggtttgtagttctccttgaagaggtccttcacatccttgtaagttgtattcctaggtacttcattcttgttgtagcaatggtgaatgggagttcactcatagtttggctctctgtttgtctgttattggtgtataggaaagcttgtgatttttgcacattgattttgtatcctgaaactttgctgaagtagcttatcagcttaaggagattttgggctgagacgatggggttttctaaatatataatcatgtcatctgcagacagagacaatttgacttcctcttttcctaattgaataccctttatttctttctcttgcctgattaccctggccagaacttccaacactatgttgaataggagtattgagagagggcatccttgtcttgtgctgattttcaaagggaatgcttccagtttttgcacattcagtatgttattggctatgggtttgtcataaatagcacttaatattttgagatacgttccatcaatacc-agtttattgagagtttttagcatgaagggctgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtagtttttgtcattgattacgtttatgtgatggattacatttattgatttgc--atgttgaaccagccttgcatcccagtgatgaagccaacttgatcatgatggacaagctttttgatgtgctgctggattcagttttccagtattttattcaggatttctgcattgatgttcatcagggatattggcctaaaattttc-ttttttgttgtgtccctgccaggttttggtatcaagatgatcctggcctcataaaatgagttagagacgattctctctttttctattgtttggaatagtttcagaaggaatggtaccagctcgtctttgtacctctggtagaatttggctgtgaatccgtctggtcctggactttttttggttggtaggctattaattaatgcctcaatttcagaacttgttatttgtctattcaggaatttgacttcttcctggtttagtcttggga---------------------------------------------------------------------- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42352443 1207 + 202140232 tatttttccagttctgtgaagaaagtcaatggtagtttgatggggatagcagtgaatctataaattcctttgggcagtatggccattttcacgatattgattcttcctatctatgagcatgaaatgtttgt-catttgtttgtgtcctctcttattttcttgaacagtggtttgtagttctccttgaagaggtccttcacatccttgtaagctgtattgctaggtatttcattctttttgtagcaattgtgaatgggagttcactcatagtttggctctctgtttgtctgttattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgaaactttgctgaagttgcttatcagcttaaggggatttggggctgagatgatggggttttctaaatatacaatcatgtcatctgcaaacagagacaatttgacttcctcttttcctaactgaata-cctttatttctttctcttgcctgattgccctggccagaacttc-----ctatgtttaataggagtggtgagagagggcatccttgtcttgtgctgattttcaaagagaatgcttccagtttttgcaaattcagtatattattggctgtgggtttgtcataaatagcacttattattttaagatatgttccatcaacacctagtttattgagagcttttagcatgaagggctgttgaattttgtcaaaggtcttttctgcatctattgagataatcgtgtagtttttgtcattggttccatttatgtgatggattacatttattgatttgcatatgttgaaccagctttgcatcccagggatgaagccaactttatcatggtggacaagctttttgatgtgctgctggattcagtttgccagtattttattcaggatttctgcatcgatgttcatca-ggatattggcctaaaattttcttttttcattgtgtccctgccaggtttttgtatcaagatgatgctggcctcataaagtgagttagggagcatgctctctttttctattgtttggaatagtttcagaaggaatggtactagctcctttttgtacccctggtagaattcggctgtgaatctgtctggtcctggactttttttggttggtaggctgttaattaatgcctcaatttcagaacttgttattggtctattcaggaatttgacttattcctggtttagtcttggga---------------------------------------------------------------------- i ponAbe2.chr3 C 0 I 70 s macFas5.chr5_KE145639_random 68369 1260 - 87690 tttttttccaattctgtgaagaaagtcaatggtagtttgatggggatagcagtgaatctataaattactttgggcagtatggccattttcgtaatattgattcttcctatctacgagcatggaatgtttttctgtttgtttgtgtcctctcttatttccttgagcagtagtttgtagttctccttgaagaggtccttcacatccttttaagttgtattcctaggtatttcattctttttgtagcaattgtgaatgggagttcgctcatagtttggctctctgtttgtctgttattggtgtataggaatgcttgtgatttttgcacattgattttgtatcctgaaacttcgctgaagttgcttatcagcttaaggagattttggactgagacgatggggttttctaaatatacaatcatgtcatctgcaaacagagacaatttgacttcctcttttcctaattgaataccctttatttctttctcttgcctgattgccctggccagaacttccaatactatgttgaataggaatagtgagagagggcatccttgtcttgtgctgattttcaaagggaatgcttccagtttttgtgcattcagtatgttattggctgtgggtttttcataaatagcacctattattttgagatacgttccatcaatacctagttcattgag-gtttttagcatgaagggctgttgaattttgtcgaaggccttttctgcatctattgggataatcatgtagtttttgtcattggttccgtttatgtgatggattacatttgttgatttgcatatgttgaac------------------------ccaccttgatcgtggtggagaagctttttgatgtgctgctggattcagtttgccagtattttactgaggatatctgcatcaatgtttatcagggatattggcctaaaattctctttttttattgtgtccctgccaggttttggtatcaggatgatgctggcctcataaaatgaattaaggaggattccctctttttctgttgtttggaatagtttcagaaggaatggtgccagctcctctttgtacccctggtagaattcagctgtgaatctgtctggtcctggactttttttggttgataggctattaattacagcctcaatttcagaacttgctattggtctattcaggaatttgacttcttcctggtttagtcttgggagggtgtatgtgtccaggaatttatccatttcttctagattttctagtttatttgcatagaggtgtttata i macFas5.chr5_KE145639_random I 1 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I e panPan1.JH650567 939 34608 + 44305 I a score=2422.000000 s hg38.chrUn_GL000218v1 108401 4 + 161147 gtat s panTro4.chr3 77183625 4 + 202329955 gggt i panTro4.chr3 C 0 I 60 s panPan1.JH650567 35547 4 + 44305 gtat i panPan1.JH650567 I 34608 C 0 s ponAbe2.chr3 42353720 4 + 202140232 gtat i ponAbe2.chr3 I 70 C 0 s macFas5.chr5_KE145639_random 69629 4 - 87690 gtat i macFas5.chr5_KE145639_random C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I a score=41060.000000 s hg38.chrUn_GL000218v1 108405 89 + 161147 tctctgatgataatatgcatttctgtgggatcagtggtgatatccccttaatca-tgttttattgcatctatttgattcttctctctttt s panPan1.JH650567 35551 89 + 44305 tctctgatgatgatttgtatttctgtaggatcagttgTGATATCcccttaatca-ttttttattgcatctattttattcttctctctttt i panPan1.JH650567 C 0 N 0 s ponAbe2.chr3 42353724 89 + 202140232 tgtctgatggtaatttctatttctgtgggattggtggtgatatcccctttatca-ttttttattgcatctatttgattcttctctctttt i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 69633 90 - 87690 tctctgatggtaatttgtatttctgtgggattggtggtgatatcccctttatcatttttttattgcatctatttgatttttctctctttt i macFas5.chr5_KE145639_random C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I e panTro4.chr3 77183629 60 + 202329955 I a score=681618.000000 s hg38.chrUn_GL000218v1 108494 1394 + 161147 cttctttattagtctggctagtggtctgatttgttgatcttttcaaaaaatcagctcctggattcattga-ttttttgaagggtttttcgtgtctctatctccttcaattctgctctgatcttatttgtgtcttgtcttctgctagcttttgaatttgtttgttcttgcttctctagttcttttaattttcatgttaaggtgtcaattttagatctttcctgctttctcttgtggacatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctgggacgttgtgtctttgttctcattggtttcgaagaacatttttatttctgccctcaattctttatttacccagtagtcattcaggatcaggttacccagtttccatgtagttgtgaggttttgagtgagtttcttaatcctgcatactaatttgaatgcattgcggtctgagagactgtttgttatgatttccattcttttgcatttcctgaggagagttttacttccaattatgtggtcaattttagaataagtgcaatgtggtgctgagaagaaggtatattctattgatttggggtggagagttctgtagatatcttttaggtccccttggtccagaactgagttcaagtcctggatattcttgttaattttctgtctcattga----tctaatattgacagtggagtgttaaagtctcccactattattgtgtgggagtctaagtctctttgtaggtctttaagaacttgctttatgaatctgagtgctcctgtattgggtgcatatatgtctaggatagttagctcttcttgttgcattgatccctttaccattatgtagtgcccttctttgtctcttttgatctctgttggcttaagatctgttttatcagaaactaggattgcaacccccgccttttgt-tgctttccacttgcttggtaaatgttcctccatccctttattttgagcctatgtgt----------atgagatgggtctcctgagtacagcacgttgatgggtcttgactctttatccaatttgccagtctgtgtctttcaattgggggcatttagctcatttacatttaaggttaatattgttatgtatgaatttgatcctgtcattatgatactagctggttattttgctcattagttgatgcagatttttc----atagtgtcaatggtctgtataatttgttatgtttttgcagtggctgttaccagttgttcctttccatgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtga-caatatctctcagcatttgctt----gtaaaggattttatttctacttcaattatgaagcttagtttgcctggatatgaaattctggcttgaaaattcttttctt s panTro4.chr3 77183689 1396 + 202329955 tttctttattagtct-gctagtggtctattttgttgatcttttcaaaaaaccagctcctggattcattgatttttttgaagagtttttcctgtctctatctccttcagttctgctctgatcttatttatgtcttgtcttctgctagcttttgaatttgtttgctcttgcttctctagttcttttaattttgatgttaaggtgtcaattttagatctttcctgctttctcttgtgggcatttagtgctataaatttccctctacacactgttttaaatgtgtcccagagattctggtacgttgtgtctttgttcccattggtttcaaagaacatctttatttctgccttcatttcgttatttacccagtagtcattcaggagcagcttgctcagtttccatgtagttgtgaggttttgag-gagtttcttaatcctgcattctaatttgattgcattgtggtctgagagactgtttgttatgatttctgttctttcgcatttcctgaggagtgctttacttccaattatgtggtcagtttttgaataagtgcaatgtggtgctgagaagaaggcatattctgttgatttggggtcgagaggtctgtagatgtctattaggtccacttggtccagagctgagttcaagtcctggatattcttgttaatcttctgtctcaatga----tctaatattgacagtagagtgttaaagtctcccactattattgtgtgggagtctaagtctctttgcaggtctataagaacttgctttatgaatctgagtgctcctgtattgggtgattatatgtctaggattgttagctctccttgttgcattgatctctttaccattatgtaatgcccttcttt-tctcttttgatctttgttggcttaaagtctgttttatcagaaactaggattgcaacccctgacttttgt-tgctttccactttcttggtaagtgttcctccatccctttattttgagcctatatgt----------atgagataggtctcctgaatacaggacattgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattgggggcatttagctcatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatactagctggttattttgctcgttagttgatgcagttttttc----atagtgtcaatggtctttacaatttggtatgtttttgcagtggctggtaacagttgttcctttctgtgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtga-gaaaatcttaaagcatttgcttgtcggtaaaggattttattcctccttcacttatgaagcttagtttggctggatatgaaattctggcttgaaaattcttttctt i panTro4.chr3 I 60 C 0 s ponAbe2.chr3 42353813 1402 + 202140232 cttctttattagtctgactagtggtctattttgttgatcttttcaaaaaaccagctcctggattcactga-ttttttgaagggttttttgtgtctctatctccttcagttctgctctgattttatttatgtcttgtcttctgctagcttttgaattgatttgctcttgcttctctagttcttttaattgtggtgttaaggtgtcaattttagatatttgctgctttctcttgtgggcatttagtgctataaatttccctctacacactgctttaaatgtgtcccagagattctggtacgttgtgtctttgttctcattggtttcaaagaacatctttatttctgccttcattttgttatgtacccagtagtgattcaggagcagtttgctcagtttccatgtagttgtgctggtttgagtgagtttcttaatcctgagttctaatttgattgcactgtggtctgagagactgtttgttatgatttccattcttttgcatttgctgaggagtgttttacttccaattatatggtcaattttagaataagtgcaatgtggagctgagaagaaggcatattctgttgatttggggtggacagttctgtagaagtctattaggtccacttgttccagagctgagttcaagtcctggatattcttgttaattttctgtctcattgatctgtctaatattgacagtggagtgttaaagtgtcccactattattgcatgggagtctaagtctctttgtatgtctttaagaacttgctttatgaatctgggtgctcctgtattgggtgcatatatgtctaggatagttagttcttcttgttgaattgatctctttaccattatgtaatgcccttctttgtctcttttgatctttgttggcttaaagtctgttttatcagagactaggattgcaacccctgccttttgt-tgctttctgcttgcttagtaaatcttcctccattcctttattttgagcctgtgtgt----------atgagatgtgtctcctgaatacagcacactgatgggtcttgactctttatccaatttgccagtctgtgtcttttaattgggggcatttagcccatttacatttaaggttaatattgttacgtgtgaatttgatcctgtcattatgatactagctggttattttgcttgtttgttgatgcagttttttc----atagtgtcaatggtctttacaatttggtgtgtttttgcagtggctggtaccagttgttcctttccatgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtga-aaaaatctctcagcatttgcttgtctgtaaaggattttatttctccttcgcttatgaagcttagtttggctggatatgaaattctggcttgaaaattcttttctt i ponAbe2.chr3 C 0 C 0 s macFas5.chr5_KE145639_random 69723 1417 - 87690 cttctttattagtctggctagcagtctattttgtcgatcttttcaaaaagccagctcctggattcattgatttttttgaagggttttttgtgtctctgtctccttcagttctgctctgatcttatttatgtcttgtcttctgctagcttttgaatttgtttgctcttacttctctagttattttaatcgtgatgttaaggtgtcaattttagatctttcctgctttctcttatgggcatttagtgttagaaatttccatctacacactgctttaaatgtgtcccagagattctggtacgttgtgtctttgttctcattggtttcaaagaacatctttatttctgccttcatttcattatttacccagtagtcgttcaggagcaggttgctcagtttccatgtagttgtgtgattttgagtgagtttcttaatcctgagtcttaatttgattgcattgtggtctgagagactgtttgttatgacttccgttcttttgcatttgctgaggagtgttttacttccaattatgtggtcagttttagaataagtgtaatgtggtgctgagaagaaggtatattctgttgatttggggtggagagttctgtagatgtctattaggtctgcttggtgcagagctgagttcaattcctggatatccttgttaaccttctgtctcattgatctgtctaatgttgacagtggggtgctaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtctttaagaacttgctttatgaatctgggtgctcctgtattgggtgcatatatatctaggatagttagttcttcttgttgcattgatccctttaccattatgtaatgtccttcattgtctcttttgatctttgttggcttaaagtctgttttatcagagactaggattgcaacccttgctttttttctgctttccacttgcttggtaaatcttcctccatccctttattttgagcctatgcatgtctttgcacatgagatgggtctcctgaatacagcacatcaatgggtctttactc--tatccaatttgccagtctgtgtcttttaaatgggggcatttagcccatttacatttaaggttaatattgttatgtgtgaatttgatcctgtcattatgatattagctggttattttgcccattagttgatgcagtttcttcatagatagtgtctatggcttttacaatttggtatgtttttgcagtggctggtaccagttgttcctttccatgtttagtgcttccttcaggagctcttgtaaggcaggcctggtggtgacaaaaatctctcggcatttgcttgtctataaaggattttatttctcctttgcttatgaagcttagtttggctggatatgaaattctgggttgaaaattattttctt i macFas5.chr5_KE145639_random C 0 N 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I a score=247620.000000 s hg38.chrUn_GL000218v1 109888 987 + 161147 taggaatgttgtatattggccgccactctcttctggcttgtaggctttctgccaagagatccactgttagtctgatgggcttccctttgtgggtaactcaacctttctctctggatgccctttatattttttccttcatttcaaccttggtgaatctgatgattttttgtcttggggttgctcttcttgaggaatatcttagtggtgttctctgtatttcctgaatttgaatgttggcctgtcttgctaggttggggaagttctcctggataatatccttgagagtgttttccaacttggttccattctctctgtcactttcaggtacacgaatcaaacatagattcagtgttttaacatattcctctatttcttggaggctttgttcatttc-tttcactcttttttctcgaatcttttcttcttgctttatttcattgagttgatcttcaatctctgatattctttctcctgcttgattgattcagctattgatacttgtgtatgcttcatgaagttcttgtgctgggtttttcagctccatcagttcatttatattcttctctaaactggttattctagttaacaattcatcctacctttttttttcaggctcttagcttccttgcattgggttagaacacgctcctttagcttggaggagtttgttattacccgccttctgaagcctacttctgtcaatccatcaaactcattgtctgtccagttttgttcccttgctggtggggagttgtgatcttctggaggagaagaggcattctggcttttggagttttc-gcctttttgcactggtttctccccatctttgtggatttatctacctttggtctttgatgttggtgatgttgatactattcctttatgtttgttagttttccttctaccagtcaggtccctctgctgcaggtttgctcgagtttgctggaggtccactccagaccctgtttgcctgggtatcaccagtgga s panTro4.chr3 77185085 989 + 202329955 taggaatgttgaatattggcccctactctcttctggcttgtagggtttctgccaagagatcagctgttagtctgatgggcttccctttgtggataactcaagctttctctctggctgcccttaacattttttccgtcatttcaaccttgatgagtctgacgattttctgtcttggggtcactcttcttgaggagtatcttagtggtgttctctgtatttcctgaatttgaatgttggcctgtcttgctaggttggggaaattctcctggataatatccttaagagtgttttccaacttggttccattctccccgtcactttcaggtacaccaatcaaacgtagattaagtcttttcacatagtcctctatttcttggaggcttttttcatttctttttactcttttttctctaatcttgtcttcttgctttatttcattgagttgatcttcaatctctgatatcctttcttctgcttgattgattcagctattgatacttgtgtatgcttcctgaagttcttgtgctgggtttttcagctccatcaggtcatttttgttcttctctaaactggttattctagttagcaattcatctaaccttttttttccaggttcttagcttccttgcattgggttagaacatgctcctttagctcagaggagtttgttattatccgccttctgaagcctacttctgtcaatttgtcaaactcacggtctgtccagttttgttcccttgctggcggggagttgtgatcctttggaggagaagaggcattctggcttttggagttttcagcctttttgcactggtttctccccatttttgtggatttatctacctttggcctttgatgttggtgatgttgatactattcctttctgtttgttagttttccttctaacagtcaggtccctctgctgcaggtctgctgaagtttgctggaggtccactccagaccctgtttgcctgggtatcaccagtgga i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42355215 988 + 202140232 taggaatgttgaatattggcccccactctcttctggcttgtagagtttctgccaagagatccggtgttagtctgatgggcttccttttgtgggtaactcaacctttctctctggctgcccttaacatttttcccttcatttcaaccttggtgaatctgatgattatgtgtcttggggttgctcttctcaaggaatacctttgtggtgttctctgtatttcctgaatttgaatgttggcctgtctttctaggttggggaagttctcctggataatatcctgcagagtgttttccaacttggttccattctccccgtcactttcaggtacaccaatcaaacatagattcagtcttttcatgtattcctctatttcttggaggctttgttcatttcttttcactcttttttctctaatcttgtcttcttgctttatttcattgagttgatcttcaatctctgatatcctttcttctgcttgattgatttggctattgatacttgtgtatgcttcatgaagttctcgtgctgtgtttttcagctccatcaggtcatttatgttcttctctaaactggttattctatttagcaattcatctaacc-tttttttccaggttcttagcttccttgcattgggttagaacatgctcctttagctcagaggagtttgttattacctgccttctgaagtctacttctgtcaattcgtcaaactcattctctgtccagttttgttcccttgctggggaggagttatgatcctttggaagagaagaggcattttggctttgggagttttcagcctttttgcactggtttctccccatctttgtggatttatctacctttggtctttgatgttggtaatgttgatactattcctttctgtttgttagttttccttctaacagtcaggtccctctgctgcaggtctgctggagtttgctggaggtccactccagaccctgttttcctgtgtatcaccagtgga i ponAbe2.chr3 C 0 I 1401 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I a score=98418.000000 s hg38.chrUn_GL000218v1 110875 1173 + 161147 ggctcagttggaaatgcatgaaccacctgccttctgtgttgatcccactgggtgctgcagaccggagctgttcctattcagacatcttgccagcTCTTctgtaatacttttatgaatgggtgtagtcctatcttctcaaggtccccaaataacttgaggttcctgggcccgtcagaaagtgacattctttacttcttaccacaaggacagcaactttgtaaaggacccttgtagacaagacaccaagccagtcattctaaggggctttgcattggtgctataaagtcaagctcaattccttaaagtggtctggttgtatctgctgttcgagttaaagccttgataaaacaaacagtgtctccaattgaatcctgttaccaaaaatagattcttattgaaattatgcaaataattatattgccataatttaggaatgctcacgaatggcttctgaattctggagaaatcagttagagagacagataaatggctcaaatttttgttcacaatgtagtttttctaacgtagggtaagttaaaaatagctgaaaagaaaaaaaattcttgactttggaaaacaaaacataaagagaatcaacaatgtttccaatggaagggccatgaataaaatcttttccttcttttataagttcagtccaatgtaactaaatcttgttctgcttgatttcaaatagcaattctcattcagttttttgtgttttgcttgatttcaattggaaattctcattcagctttttagagtcctggaagattttcctagtccaatggtatgatccccaaagttatctgaaaccatatttaagagaacttgtcagagtcctttccattaaaaataatttagatgatagctgattgtaaaggctttttt-------attttttttgagacatggtctggttctatcactcaggatggagtgcagtggcatgatcttggctcaccacaatttctccctcccaaactcaagccatcctcctacctcagcctccgaagtagttgggaccataggcatgcaccatcatg-ctggctaatttttgtatttttgtagagacagggttttaccatgttgcccaggatgctttcaaacttctgagttcaagcaattcacccacctcggccttgcaaagtgctgggatttttacacgtgtgagccaccgtg s panTro4.chr3 77186074 1177 + 202329955 ggttcagttggaaatgcatgaatcacccgccttctgcattgatctcactgggagctgctggccggagctgttcctattcggacatcttgccagcTCTcctggaatacttttatgaatgggtgtagtcctctcttctcaaggtccccaaatatcttgaggttcctgggcccatcagaaagtgacattctttacttcttaccacaaggacagcaactttgtaaaggacccttgtagacaagacaccaagccagtcattctaaggggctttgtattggtgctataaagtcaacctcaattccttaaagtggtctggttgtatctgccattcgagtcaaagccttgata----aaacagtgtctccaattgaatcctgttaccaaaaacagattcttattgaacttatgcaaataattatattgctaaaatttaagaatgctcatgaatgccttctgaattctggagaaatcagttagagagacagataaatggctcaaatttttgttcacaatatagtttatctaatgtattgtaagttaaaaatagctgaaaagaaaaaaaattattgactttggaaaacaaaacataaagagaatcaacaatgtttccaatgaaagggccatgaatagaatcttttctgtcttttataagttcagtcccatgtaactaaatcttgttctgcttgatttcaaatagaaattctcattcagctttttgtgttttgcttgatttcaattagaaattctcattcagctttttagagtcctggaagattttcctagtccagtggtatgatccccaaagttaccagaaaccgtatttaagagaacttgtcagagtcctttccattaaaagtaatttagatgatagctgatttgaaaggcttttttttttctctttttttctgagacatggtctggctctatcactcaggatggagcacagtggcatgaccttggttcaccgcaatctctcccacccaaactcaagccatcctcctacctcagcctcccaagtagttgggaccataggcatgcaccaccatgcctggctaatttttgtatttttgtagagacagggttttaccatgttgcccaggctgctctcaaacttctgagttcaagcaattcacccacctcagccttgcaaagtgctgggattcttatatgggtgagccaccgtg i panTro4.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I e ponAbe2.chr3 42356203 1401 + 202140232 I a score=177425.000000 s hg38.chrUn_GL000218v1 112048 717 + 161147 ccctgcaccacgcccagcaccgtgccctgcacagcctccagcagcacgcccagcctgtaaagggttttagagaagaactttaaacaatcactgtggatgacaaaaacttagaatatcctttggttaaaatccagtggaagttcttgacctgcgagaaaatttagttatttctattatatgtagcattttaagataacagccagaatcatgactgacggcaacacatcagatccatcagacttccacaaattttatataatctttagaatatttatattaataatatatctatacatatacaactttagagaatatttaacatcatcaaaattatgactgataccatattagatttttat-aatttatataacatttaaaatatttatattaataatatacctataaatgtaaccaaaagaagatttaggccaggcacagtggctcatgtctgtaatcccaacactttgggaggccaagttggacagatcatcagaggtcaggagtttgacaccagcctggccaacatggagaaatcttgtttctactaaaaatacaaaattagccgggcgtggtggcatgtgtctgtagtctcagctacttgggaggttgaggcaggagaatcgcttgaaccttggggcagaggttgcaatggacctagatcacgccactgcactccagcctgggtgacaaagcaagattgtgtctcagagaaaaaaa s panTro4.chr3 77187251 717 + 202329955 ccctgcaccatgcccagaaccaagccctgcacagtgtccagcaccgcgcccggcctataaagggtttcagagaagaactttaaacaatcaccgtggatgacaaaaacttagaatagcctttggttaaaatccggtggaagttctcaactggcaagaaaatttagttatttctattatatgtagcattttaagataacagccagaatcatgactaatggcaacacatcagatccatcagactttcacaaattttatataatctttagaatatttatattaataatatatctatacacatacaactttagaaaagatataacatcatCAAAATTATCACTGATACCATATTAGatttttat-aatttatataacatttaaaacatttatattaataaCATACCTATAAATGTAACCAAAAGAAGATTTAggccaggcacagtggctcatgcctgtaatcccaacactttgggagaccaagttggacagattttctgaggtcaggggcttgaaaccagcctggccaatgtggcgaaaccttgtctctactaaaaatacaaaattagccgggcatggtggcatgtgtctgtagtcccagctacttgggaggttgaggcaggagaatcgcttgaaccttggggcagaggttgcagtgaatcaagatcatgccactgcactccagcctgggtgacaaagcaagattctgtctcacagaaaaaaa i panTro4.chr3 C 0 I 2 s ponAbe2.chr3 42357604 718 + 202140232 ccctccaccaggcccagcactgcaccctgcaccaTGTCCAGCACCATGCCCGGCCtgtaaacggttttagagaagaactttaagcaatcaccatggatgacaaaaacttagaatagcctttggttaaaatccagtggaagttctcaactggcaacaaaatttagttatttctattatatgtagcattttaaaataacagcccaaatcatgactgacggcaacacatcagatccatcagacttccacaaattttatataatctttagaatatttatattaataatatatctatacacatacaactttagaaaagatttaacatcatcaaaattatcactgataccatattagatttttataaatttatataatgtttaaaacatttatattaataacatatctataaatgtaaccaaaagaagatttaggccaggcacagtggctcacacctgtaatcccagcactttgggaggccacgttggacagatcacctgaggtcaggagttcgacaccagcctggccaacatggtgaaaccttgtctctaataaaaatacaaaattagccaggcatggtggcacgtgtctgtagtcccagctacttgggaggttgaggcaggagaattgcttgaaccttggggcagaggttgcagtgaattgagatcacaccactgcactccggcctgggtgacaaagcaagattctgtctcagagaaaaaaa i ponAbe2.chr3 I 1401 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I a score=1456.000000 s hg38.chrUn_GL000218v1 112765 26 + 161147 aaagaaga------tttagtgttacttatctt s ponAbe2.chr3 42358322 32 + 202140232 aaagaagaagttgttttagcattacttatttt i ponAbe2.chr3 C 0 C 0 e nomLeu3.chr21_GL397661_2_random 97427 9356 - 139590 I e papAnu2.JH684932 47063 5795 + 231459 I e panTro4.chr3 77187968 2 + 202329955 I a score=22793.000000 s hg38.chrUn_GL000218v1 112791 88 + 161147 ttggcaatgcttcccatacaatgttatcaaataagatttagcaaagatgtc-aaaaaattgaaaacatttgaccaaaacagaatgacag s ponAbe2.chr3 42358354 88 + 202140232 ttggcaatgcttcccatacaatgttatcaactaagttttagcaaagatgtc-aaaaaattaaaaacatttgaccaaaacagaatgacag i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 106783 89 - 139590 TTGGCAATGCTTCCCATACAATGTTATCAACTAAGTTTTAGcaaagatgtcaaaaaaattaaaaacatttgaccaaaacagaatgacag i nomLeu3.chr21_GL397661_2_random I 9356 C 0 e papAnu2.JH684932 47063 5795 + 231459 I e panTro4.chr3 77187968 2 + 202329955 I a score=924.000000 s hg38.chrUn_GL000218v1 112879 7 + 161147 -tttattg s ponAbe2.chr3 42358442 6 + 202140232 -tttatt- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 106872 7 - 139590 -tttattg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 52858 7 + 231459 ttttttt- i papAnu2.JH684932 I 5795 C 0 e panTro4.chr3 77187968 2 + 202329955 I a score=1311494.000000 s hg38.chrUn_GL000218v1 112886 1716 + 161147 tttttta-ttttattatttttttgagacagggtctcaccctgttgcccaggctggagtgcagtggtgaaatcatggctcactgcagcctcaacctcccaggctcaggtgatcctcc-accttagtatcccaagtagccaggactatgagcacttgttat--------gacacatagctag-cttttgta-ttttcagtagagatgcggttttgccattttgcccaggctggacttgaactcctgggctcaagtgatccacccaccttggcctcccaaagggccggaattacagacaagagccgctgcacacagccacatgtcatttttaaataacagtcattcatttaattagcatgacaaccaaaagacatcaaaagcaacgtagaaggttacatggatgtgataactgaaaaccctcagttttcccaagtaattaaaaaaa-----------aaataaaggcaacacatggattatcttgataaaacctaaaatctttattacaggccagtcatttaaagggtaaaa-ctcctgtggcataactgtgtcttcttacaggaaactaatttaaatcacttggaagtcaattccgatgacaaggagacttgaatttaattagacatagaaagagtgtgtccagggtcatgagtgagcataatattacaaaggaatgtaaacaggaaaaccagagcatagagcagtggggatccatagctcacaatgatagcaa-gaaagtttcctggttacatgaagtaattaagacatatttaaaagccaagagtataaaattagacctgatgaaaaagctgaaggagttatcatcccagccaagcaggaaACCCAAGCCTTTTATTCCTTCTCAAGAAGGAACAGGAGACAGTGATGTGATCTGTGAGTCATGTGTAACAtgaaagtacaggaaaagttgaacttctgatatacaaatctgaaaagtt-tttatagtaacagatttcaggattaaaagtcaatatttattacctcttattatgagcaaataaatacattaagaaaaccttgttgttttaaccaaaatttttagttttttatcgct--gtttttaatattatagctaatttaaataaactttataaacaatctatctgatctcaatcagttttggcctcgatgtaagatttacataaacttttaataaccttctataattttttc--atctttcccaactttttatacacatgtagttttatctatc-ttttttattccttcaatttaaaataatccttaaaaatctctaagcgaatttactttctctgaaacaaaaaccggtatacattttgcatacagaattgtttctcttgtatctagtagtcttaatcacacatatctagcaagatattaacacttagtaacccttattttaataaaaaacctaggaagcaagaaatctggaat----tgtcatatagcagtatcttacatatgagaataatttcataatttagaattatgtgttcctaaaacatattt----tttaagatggattttcgctcttgttgcccaggctggagtgcaatggtgtgatctcagctcactgcaatctccgccccccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggaacccaccatcacacctggctaattttttgtattt-tttagtagagatggggtttcaccatgttgatcaggctggtcttgagctcctgacctcgggtgagccacccgcc s panTro4.chr3 77187970 1724 + 202329955 tttttta-ttttattatttttttgagacagggtctcaccctgttgcccaggctggagtgtagtggtacaatcatggctcactgcagcctcaacctcccaggctcaggtgatcctcc-accttagcttcccaagtagccaggactatgggcatgtgccac--------cacacctacctag-tttttgtg-tttttagtggagatggggttttgccattttgcccaggctggacttgaactactgggttcaagtgatccacccaccttggcctcccaaagtgctggaattataggcatgagccgctgcacagagccacatgtcatttttaaataacagccattcatttaagtagcatgacaaccaaaagacatcaaaagcgacatagaagattacatggatgtgaaaactgaaaaccctcagttttcccgagtaattaaaaaaa-----------caataaaggcaacacatggattattttgatacaatctaaaatctttattagaggccagtcatttaaagggtaaaagctcctgtggcataattgtgtcttcttatgggaagctaatttaaatcacttggaagtcaaacccgatgacaaggagacttgaatttaattagacatacaaagagtgtgtccagggccatgagtgagcataatattacagaggaatgtaaagaggaaaaccagagcatatagcagtggggatccatagctcacagtgatagcat-ggaagtttcctggttacatgaagtaattaagacatatttaaaagccaagagtacaaagttagacctgatgaaaaagcagaaggagttatcatcccagccaagcagaaaagccaaaccttctctcccttttcaagaaggaacagaagacaatgatgtgatctgtgactcatgtgtaacatgaaaatacaggaaaagttgaacttctgatatacaaatctgaaaagtt-tttatagtaacagatttcaggattaaaagtcaatatttattacctcttattaagagcaaataaatactttaagaaaatcttgttgttttaaccaaaatttttagttttgtatcactatgtttttaatattatagctaatttaaataaactttataaacaatctatttgagatcaatcagttttgacctcgaggtaagatttacataaacttttaataaccttgtataattttttc-catctttcccaactttttatacacatttagttttatctatc-ttttttattccttcaatttaaaataatccttaaaaatctctaagcgaatttactttctctgaaacaaaaaccggtatacattttgcatacagaattgtttctcttgtatctagtagtcttaataacatacatctaccacgatattaacacttagtaacccttattttaataaaaaacctaggaagcaagaaatcttgaat----tgtcatatagcagtatcttacagatgagaatgatttcataatttagaattacgtgttcctaaaacatatttattttttaagacggagtttcgctcttgttgcccaggctggagtgcaatggcgtgatctcggctcactgcaatctccgctccccaggttcaagcaattctccagcctcagcctcccgagtagctgggtttacaggaacccatcaccacacctggctaattttttgtattt-tttagtagagatggggtttcaccatgttggtcaggctggtcttgagttcctgacctcgggtgagccacccgcc i panTro4.chr3 I 2 C 0 s ponAbe2.chr3 42358448 1724 + 202140232 tttttta-ttttattatttttttgagacagggtctcaccctgttgcccaggctggagtgcagtggtgcaatcatggctcactgcagcctcaacctcccaggctcaggtgatcctcc-accttaacctcccaagtagccgggactacaggcacatgccaccacacctacacacctagctag-cttttgta-cttttagtagagatggagttttgccattttgcccaggctggacttgaactcctgggctcaagtgatccacccaccttggcctcccaaagtgctggaattacaggcgtgagccgctgcacacagccacgtgtcatttttaaataacagtcattcatttaattagcatgacaaccaaaagacatcaaaagcaacacagaaggttacatggatgtgaaaactgaaaaccctcagttttcccaagtaattaaaaaaa------------aataaaggcaacacatggattatcttgataaaacctaaaatctttattacaggtcagtcatttaaagggtaaaatctcctgtggcataattgtgtcttcttatgggaagccaatttaaatcacctggaagtcaaacctgatgacaaggggacttgaatttaattagacatagaaagagtgtgtccagggtcaagagtgagcataatattacagaggaatgtaaacaggaaaaccagagcatagagcagtggggatccatagctcacagtgatagcat-ggaagtttccttgttacatgaagtaattcagacatatttaaaagccaagagtacaaaattaGACCTGATGAAAAAGCGGAAGGAGTTATCATCCCAGCCAAACAGAAAAGCCAAGCCTTCTCTTCCTTCTCAAGAAGGAACAGAAGACAATGATGTGATCCGTGAGTCATGTGTAACAtgaaagtacaggaaaagttgaacttctgatatacaaatctgaaaagtt-tttatagtaacagatttcaggattaaaaggcaatatttattacctc--attaagagcaaataaatactttaagaaaaccttgttgttttaaccaaaatttttagttttgtatcact--gtttttaatattacagctaatttaaataaactttataaacaatctatctgatctcaatcagttttgacctcgaggtaagatttatgtaaacttttaataaccttgtataattttttc-catcttttccaactttttatacacctttagttttatctatc-ttttttattccttcaatttaaaataatccttaaaaatctctaagcgaatttactttctctgaaataaaaaccggtatacattttgcatacagaattgtttctcttgtatctagtagtcttaatctcatatatctaccacaatattaatacttagtaacccttattttaataaaaaacctaggaagcaagaaatcttgaat----tgtcatatagcagtatcttacagatgagaataatttcataatttagaaatatgtgttcctaaaaCAttttt---ttttaagacagagttttgctcttgtttcccaggctggagtgtaatggagcaatctcagctcactgcaacctccaccccccaggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcacccgccaccacacctggctaattttttgtgttt-tttagtagagatggggtttctccatgttggtcaggctggtcttgagctcctggcctcgggtgatccacctgcc i ponAbe2.chr3 C 0 M 354 s nomLeu3.chr21_GL397661_2_random 106879 1713 - 139590 ttttttattttttttatttttttgagacagggtctcaccctgttgcccaggctggagtgcagtggtgcaatcatggctcactgcagcctcaacctcccaggctcaggtgatcctcc-accttagcctcccaaggagtcaggactatggccacgtgccac--------cacacctagctag-tctttgta-tttttagtagagatggagttttgccatttttcccaggctggacttgaactcctgggctcaagtgatccaccaaccttggcctcccaaagtgatggaattacagacgtgagccactgcacacagccacatgtcatttttaaataacagtcattcatttaattagcatgacaaccaaaagacatcaaaagcaacatagaaggttacatggatgtgaaaac-gaaaaccctcagttttcacaagtaattaaaaaaa-----------caataaagacaacacatggattatcttgacaaaacctaaaatctttattacaggccagtcatttaaagggtaaaatctcctgtggcataattgtgtcttcttatgggaagctaatttaaatcacttggaagtcaaacgcgatgacaaggagacttgaatttaattagacatagaaagagtgtgtccagggtcatgaatgagcataatattacagaggaatgtaaacaggaaaaccagagcatagagcagtgtggatccatagctcacagtgatagcat-ggaagtttcctgtttacaagaagtaattaagac-tatttaaaagccaagagtacaaaattaaACCTGATGAAAAAGCTGA-------GTTATCCCAGCCAAGCAGAAAAGCTAAGCCTTCTATTCCTTCTCAAGAAGGAACAGAAGACAATGATGTGATCTGTGAGTCATGTGTAACAtgaaagtacaggaaaagttgaacttctgatatacaaatctgaaaagtt-tttatagtaacagatttcaggattaaaagtcaataattattacctcttatcaagagcaaatacatactttaagaaaaccttgttgttttaaccaaaatttttagttttctatcactatgtttttaatattacagcaaatttaaataaactttataaacaatctatctgatctcaatcagttttgacctcgagggaagatttacataaacttttaataaccttgtataatttttttccacctttcccaactttttatacacaatgagttttatctatc-ttttttattccttcaatttaaaagaatccttaaaaatctct--gtgaatttactttctctgaaacaaaaaccggtatacattttgcatacagaattgtctctcttgtatctagtagtcttaatcacatatatctaccacaatatcaacactcagtaacacttattttaataaaaaacctaggaagcaagaaatcttgaat----tgtcatacagcagtatcttacagatgagaataatttcataatttagaattatgtattcctaaaacatattt---ttttaagatagagttttgctcttgttgctcaggctggagtgcaatggtgtgatctccactcactgcaacttccaccccctgggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggaacccaccaccacacctggctaattttttgtatttctttagtacagatggggtttcaccatgttggtcaggctggactcgagctcctgacctggggtgagccacctgcc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 52865 1692 + 231459 ttttttt-tttttttttttttttgagacggagtctcgctctgtcgcccgggctggagtgcagtggccggatctcagctcactacaagctccgcctcccgggtttacgccattctcctgcctcagcctcccaagtaactgggactacaggcgcccgccat--------ctcgcccggctagttttttgtattttttagtagagacggggtttcaccgtgttcgccaggatggtctcgatcttctgacctc--gtgatccacccgtctcggcctcccaaagtgctgggattacaggcttgagccaccgcgcccggcc-cacatcatttttaaataaccGTCGTTCATTTAAATAGCATGACAACCAAAAGACATCCAAAGCAACATAGAAGGTTACATGGATGTGAAAACTGAAAACCCTC--TTTTCtcaagtaataaaaaataaataaataaataaataaaggcaacaCATGGATTATCTTGATAAAACCTAAAATCTTTATTACAGGCCAGTCATTTAAAGGGCAAAACCTTCTGTGGTATAAGTGTGTCTTCCTAGGGGAAGCCAATTTAAATCACTTGGAAGTCAAACCCAACGACAAGGGGACTTGAAT----TTAGACATAGAAAGAGTGTG--CAGGGTCATGAGTGAGCTTAA---TACAGAGGAATGTAAACAGGAGAACCAGAACGCAGAGCAGTGGGGATCCACAGCT--CGGTGGTAGCATGGGAAGTTTCCTGGTTCCATGAAGTAATTC-------------AGCCGAGAGCACAAAATTAGACCTGACGAAAAAGCTGAAGGAGTTATCATCCCAGCCAAGC----------------CTATTCCTTCTCAAGAAGGAACAGAAGACGATGATGTCACCTGTGAATCATGAGTAATATGAAAGTACAGGAAAAGTTGAACTTCTGATATACAAATCTGAAAAGTTCTTTATAGTAACAGATTTCAGGATTAAAAGTCAACATTTATTACCTCTTATTAAGAGCAAATAAATACTTTTAGAAGACCTTGTTGTTTTAAccaaaatttttagttttgtatcaCT--GTTTTTAATATTGCAGctaatttaaataaactttataaacaaTCTATCTAATCTCAATCAGTTTTGACCTCGAGGTAAGATTGACATAAACTTTTAATAACCTTGTATAATGTTTCC--ATCTTTCCCAACTTTTTATACACATTTAGGTTtatctatcattttttattccttcaatttaaaataatccttaaaaATCTCTAAGCAAATTCACTTTCTCTGAAACAAAAACCTGTATACATTTTGCATGCAGAATTGTTTCTCTTGTATCTAGTAGCCTTCATCACATATATCTATCACAGTATTAACACTTAGTAACCcgtattttaataaaaaacctAAGCAGCAAGAAAGCTTGAGTTGTCTGTCATACAGCAGtatcttacagatgagaataatttcataatttagaaatgtgttttcctgaaacatattt---tttcaagatagagtttcgctc-tgtcccccaggctggagcgcggtggtgcagtctcagctcaccgcaacctccgcctcccaggttcaagcaattctgctgcctcagcctcccgagtagctgggattacaggtgcccgccaccacacccagataattttttgtatt--tttagtagagacagggtttcaccatgttggtcaagctggtcttgagctcctgacctcaggtgatctgcccacc i papAnu2.JH684932 C 0 C 0 a score=10152.000000 s hg38.chrUn_GL000218v1 114602 21 + 161147 ttggcctcccaaagtgcaggg s panTro4.chr3 77189694 21 + 202329955 ttggcctcccaaagggctggg i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 108592 21 - 139590 ttggcctcccaaagtgctggg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 54557 21 + 231459 tcagcctcccaaagtgctggg i papAnu2.JH684932 C 0 I 837 e ponAbe2.chr3 42360172 354 + 202140232 M a score=36477.000000 s hg38.chrUn_GL000218v1 114623 146 + 161147 attacaggcgtgagccacagtgcctgggctaaaacataagtttt-aaattggaaataacccagatatttaatgagtatctattatttaatttaacataactaaaatttcaaaaataggctgggcatggtggctcacacctgtaatcc s panTro4.chr3 77189715 147 + 202329955 attacaggcgtgagccaccgcacctgggctaaaacataagtttttaaattggaaataacccagatatttaatgagtatctattatttaatttaacgtaattaaaatttcaaaaataggctgggcatggtagctcatacctgtaatcc i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 108613 147 - 139590 attacaggcatgagccaccgtgccagggctaaaacataagtttttaaattggaaataacccagatatttaatgagtatctattatttaatttaacaaaactaaaatttcaaaaataggccgggcattgtggcttacacctgtaatcc i nomLeu3.chr21_GL397661_2_random C 0 C 0 e papAnu2.JH684932 54578 837 + 231459 I e ponAbe2.chr3 42360172 354 + 202140232 M a score=796238.000000 s hg38.chrUn_GL000218v1 114769 1604 + 161147 caacactttaggaggcctaggcaggagtatcatgaaaccagcctgagcaaaatagtgagaggctgactctacaaaaaaaaataaaagttagctgaccatggtggtgtatgcctgtaattaacagctacatgggaggctgaggtgggaggatcccttgagcgcagaaggtcaaggttgcagtgagctgtgatcatgccactgcacttcagcatgggtgacagacagagacactgtctcaaaaaaatttcaaaaatacattaagatatct------------------tgtatagacatttatccatttacatttacttatttttgacagtttatctagagtatttgtgagaactgaggtattagacaaagctagtcatcatttctaggttattttcttgttaaccatgttatagcctgtgaatatcaggtgttcacgtaagtgaggacttcaaagttaaatacatgggtattttaccaataactcagaaaattccattatttttgttcaacaaaccatattaaattggtcttatgtatttaaaaaatcacataaacaaatattcttttttcctgtgtttatagctttataaccttcatgccaaaccctagcaccttaaaatatctagcaaatgtaaatataaaacacagtcaaaaatgtatgctgacaagtctgaagagatttctattttctatttttattttatcaatactttttaaattatttgtatttataaaagaACTCTTTTGTctgggcacagtggttcatgcctgtatcccagcactttgagaggctgaggcaagaggatcacttgagctcaggagtttgagaccagcctgggcaacatagtgagacccaatctctactaagaataagataaaaaattgccaggcatggtggtgcatgcttattgtcccagctactagagaggatgaggcaggaggattgcttgagcctgggaggttgagataacagtgagctatgatctcactactgcactccagtctggggaacagagtgagaccttagagtgagaacttgtctcaaaaagagaaaaaaataaagaaTTGTTTCATTCTTTTGTTTTTCTTCAGccaagtgaccttgaattagtaacaccacagacagtaagtcttatctcaacaccagtagacaaatcagcagattcaaagtaggcagggaaaaaaaaaatagataggcaaaagaactgagactttttcactttagggtttttaaaaatagtaactatttgagttctgaattttctttcatgtaatttggccatcaggtttaaagtgtgcactagaggtcaggtgcagtggctcatgcgtgtaatcccaacactatcggaggctgaggcaggtggatcacttgaggccaggagtttgagaccagcctggccaatgtgacaaaaccccatctctactgaatatacaaaaattaactgggtgtggtagtgtccacctgtagtcccagctattcaggaggctgaggcaggataattgctcaaacctgggaggcggaggttgcagtgagccgcgattgtaccaccatactccatcctgggcaacagagcaagactctgtgtcaaaaagaaaaaggaaaaaaaaagtatatatatatg s panTro4.chr3 77189862 1591 + 202329955 caacaccttaggaggccaaggcaggagtatcatgagaccagcctgagcaaaatagtgagatgctgactctacaaaaaaaa-taaaaattagctgagcatggtggtgcgtgcctgtaattaacagctacttgggaggctgaggtgggaggatcccttgagcgcaggaggtcaaggttgcagtgagctgtgaccatgtcactgcacttcagcctgggtgacagacagagacattgtctcaaaaaaatttcaaaaatacattaagatgtct------------------tgtatagacatttatccatttacatttacttatttttaacagtttatctagagtatttgtgagaactgaggtattagacaaagctagtcatcatttctaggttatgttcttgttaaccatcttatagcctgtgaatatcaggtgttcacgtaagtgaggacttcaaagttaaatacatgggtattttaccaataactcagaaaattccattatttttgttcaacaaactgtattaaattggtcttatgtatttaaaaaatcacataaacaaatattcttttttcctgtgtttatagctttataaccttcatgccaaatcctagcaccttaaaatatctagcaaatgtaaatataaaacaccttcaaaaatgtatgctgacaattctgaagacatttctatttt-------tattttatcaatactttttaaattatttgtatttataaaagaACTCTTTTGTCTTggcacagtggttcatgcctgtatcccagcactttgagaggctgaggcaagaggatcacttgagctcaggagtttgaggccagcctgggcaacatagtgagacccaatctctactcagaataagataaaaaattaccaggcatggtggtgcatgcctattgtcccagctactagagaggatgaggcaggaggattgcttgagcctgggaggttgaggtgacagtcagctatgatcccactactgcactccagcctggggaacagaatgaggccttagagagagaccttgtgtcaaaaagagaaaaaaataaagaaTTGTTTCATTCTTTTGTTTTTCTTCAGccaagtaaccttgaattggtaacaccacagacagtaagtttcatctcaacaccagtagacaagtcatcagattcaaagtaggcagggaaaaaaaaa-----taggcaaaagagctgagattttttcattttagggtttttaaaaatagtaactatttgagttctgaattttctttcatgtaatttggccatcaggtttaaagtgtgcactataggccaggcgcagtggctcgtgcctgtaatcccaacactttgggaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctggccaacatgacaaaaccccatctctactgaaaatacaaaaattaactgggtgtggtggtgtgcacctgtaatcccagctattcaggaggctgaggcaggagaattgctcaaacctgggaggtggaggttgcagtgagctgagattgtgccaccgtactccagcctgggcaacagagcaagactctgtgtcaaaaagaaaaaaaaaaGtatatatatatatatata i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42360531 1610 + 202140232 caacactttaggaggccaaggcaggagtatcatgagaccagcctgagcaaaattgtgagatgctgactctacaaaaaaaa-taaaaattagctgagcacggtggtgcatgcctgtaatt-acagctacttgggaggctgaggtaggaggatcccttgagcgcaggaggtcaaagttgcagtgagctgtgatcataccactgcacttcagcctgggtgacagacagagataccatctcaaaaaaaTTTCAAAAATACATTAAGATGTCTTTTAGACATCTTAATGTCTTtatagacatttatccattta-atttacttatttttaacagtttatctagagtatttgtgagaactgaggtattagacaaagctagtcatcatttctaggttattttcttgttaaccatgttatagcctgtgaatatcaggtgttcacgtaagtgaggacttcaaagttaaatacatgggtattttatcaataactcagaaaattccattatttttgttcaacaaaccgtattaaattggtcttatgtatttaaaaaatcacaaaaacaaatattcttttttcctgtgtttatagctttataaccttcatgcctaaccctagcaccttaaaatatctagcaaatgtaaatataaaacacagtcaaaaatgtatgctgacaattctgaagacatttctacttt-------tattttatcaatactttttaaattatttgtatttataaaagaACTCTTTCATctgggcacagtggttcatgcctatatcccagcactttgagaggctgaggcaagaggatcacttgagctaaggagtttgagaccaacctgggcaacacagtgcgacccaatctctactaagaataacataaaaaatcaccacgcatggtggtgcatgtctattgtcccagctactggagaggatgaggcaggaggattgcttgagcctgggaggttgaggtaacagtgagctatgatcccactactgcactccagcctggggaacagagtgagaccttagagagagaccttgtctcaaaaagagaaaaaaataaagaaTTATTTCATTCTTTTGTTTTTCTTCAGccaagtaaccttgaattggtaacaccacagacagtaagtttcatctcaacatgagtagacaagtcagcagattcaaagtaggcagggaaaaaaaaaatagataggcaaaagaactgagacttgttcattttagggtttttaaaaatagaaactatttcagttctgaattttctttcatgtaatttggccatcaggtttaaagtgtgcactagaggccaggtgcagtggctcatgcctgtaatcccaacactttgggaggctgaggcaggtggatcacttgaggccaggagttcaagaccagcctggccaacatgacaaaaacctgtctctactgaaaatacaaaaattaactgggtgtggtggtgtgcacctgtagtcccagctactcaggagtctgaggcaggagaattgctcaaacctgggaggtggaggttgtagtgagctgagattgtaccaccgtactccagcctgggcaacagagcaagactctgtgtcaaaaagaaaaa--aatatatatatataaatatata i ponAbe2.chr3 M 354 C 0 s nomLeu3.chr21_GL397661_2_random 108760 1588 - 139590 caaccctttagcaggccaaggcaggagtatcatgagaccagcctgagcaaaatagtgagatgctgactctacaaaaaaaa-taaaaattagctgagcgaggtggtgcatgcctgtaattaacagctacttgtgaggctgaggtgggaggatcccttgggcacaggagatcaaggttgcagtgagctgtgatcatgccaccacacttcagtctgggtgacacacagagacactgtctcaaaaaaatttcaaaaatacattaagatgtct------------------tgtatagatatttatccacttacatttactggttttcaacagtttatctagagtatttgtgagaactgaggtattagacaaagctagtcatcatttctaggttattttcttgttaaccatgtcatagcctgtgaatatcaggttttcacgtaagtgaggacttcaaagttaaatacatgggcattttaccaataactcagaaaattccattatttttgttcaacaaaccgtattaaattggtcttatgtatataaaaaatcacataaacaaatattcttttttcctgtgtttatagctttataaccttcatgccaaaccctagcaccttgaaatatctaccaaatgtaaatataaaacacagtcaaaaatgtatgctgacaattctgaagacgtttctatttt-------tattttatcaatactttttaaattatttgtatttataaaagaACTCTTTCATctgggcacagtggttcaggcctgtatcccagcactttgagaggctgaggcaagaggatcacttgagctcaggagtttgagaccagcctgggccacatagtgaaacccagtctctactaagaacaagataaaaaattaccaggcatggtggtgcatgcctattgtcccagctactagagaggatgtggcaggaggattgcttgagcctgggagattgaggtaacagtgagctatgatcccactacggcactccagcctggggaacagagtgagaccttagagtgagaccttttctcaaaaagag-aaaaattaaaaaaTTGTTAAATTATTTTGTTTTTCTTCAGccaagtaaccttgaattggtaacaccacagacagtaagtttcatctcaacaccagtagacaagtcagtagattcaaagtaggaagggaaaaaaaa--tagataggcaaaataaatgagactttttcattttatgg-ttttaaaactagtaactatttgagttctgaattttctttcatgtaacttggccatcaggtttaaagtgtgcactagaggccaggcacagtgtctcatgcctataaacccaacactttggaaggctgaggcaggtggatcacttgaggccaggagttcgagaccagcctggccaacatgacaaaaccccatctctgctgaaaatacaaaaattaactgcgtgtggtggtgtgcacctgtagtcccagctattcaggaggctgaggcaggagaatcactcaaacctgggaggtggaggttgcagtgagccgagattgtaccactgtactccagcttgggcaacagagcaacactcagtgtcaaaaagaaaagaaaaa----aaatttatatatatg i nomLeu3.chr21_GL397661_2_random C 0 C 0 e papAnu2.JH684932 54578 837 + 231459 I a score=311228.000000 s hg38.chrUn_GL000218v1 116373 434 + 161147 tata------------------ggctgggcacagtggctcatgcctgtaatcccagcagtttgggaggccaagacgggtggatcacttgagatcaggagtttgagaccagcctggccaacatggtgaaacttcatctctactaaa-accacaaaaattagccgggtatggtggcgcacacctgtaatcgcagctactcaggaggctgagacaggagaattgctcgaacctgggaagtggaggttgcagtgagccaagatcacaccactgcactccagcatgggcaacagagcaagactctgtctc-aaaaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtggctagaatggtccataatatatagccagctcgagtcccagaaaacctagcaagcttaagGTTAGAGCTTCTCATTTTGGCCTTTTCAAGATTA s panTro4.chr3 77191453 448 + 202329955 tatatatatatatatatatatGggctgggtgcagtggctcacgtctgtaatcccagcagtttgggaggccaaggcggttggatctcctgagatcaggagtttgagaccagcctgaccaacatagtgaaacttcatctctactaaa-accacaaaaattagacgggcgtggtggtgcacacctgtaatcgcagctactcaggaggctgagacaggagaatcacttgaacctgcgaagtggaggttgcagtgagccaagatcgcaccactgcactccagcctgggaaacagagcaagactctgtctc-aaaaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgt----gtgtgactagaatggtccataatatatagccagctcgagtcccagaaaacctagcaagcttAAGGTTAGAGCTTCTCATTTTGGCCTTTTCAACATTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362141 414 + 202140232 tata------------------ggctgggcgcagtggctcatgcctgtaatcccagcagtttgtgaggccgaggtgggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaacctcatctctactaaa-accacaaaaattagccgggcatggtggcacacacctgtaattgcagctactcaggaggctgagacaggagagtcactagaacctgggaagtgtaggttgcagtcagccaagatcacaccactgcactccagcctggacaacagagcaagactctgtctc-aaaaaaatgtgtgtgtgtgtgtgtgtgtct--------------------gtgtgactagaacggtctataatatatagccagctcgagtcccagaaaacctagcaagcttaagtttagagcttctcattttggccttttcAACATTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 110348 415 - 139590 tata------------------ggctgggtgtagtggttcacgcctgtaatcccagcagtttgggaggccaaggtgtgtggatcacttgacaccaggagtttgacaccagcctgaccaacatggtgaaacctcatctctactaaacacccc--aaatttgacaggcatggtggcacacagctgtaatcacaggtactcaggatgcggagacaggagaattgctcaaacctgggaagtggaggttacagtgagccaagattgcaccactgcactccagcctgggcaacacagcaagactctgtctc-aaaaaaatgtgtgtgtgtgtgtgtgtgtgtgt------------------gtgtgactagaatggtcgataatatatagccagcttgagtcccagaaaatctagcaaGCTTAAGGTTAGAACTTCTCATTTTGGCCTTTTCAACATTA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 55415 425 + 231459 taga------------------ggccaggtgtggtggctcacgcctgtaatcccaacacttcgggaggctgaggtaggaggatcacttgaggccgggagttcaagaccggcctggccaacgtggaaaaaccctgtctctactaaa-aacacaaaaattagcagggcgtggtggtgcacacctataatcgcagctactcaggagactgaggcaagagaatcgctcaaacgtgggaggcagaggttgcagcgagctgagattgtaccactgcactccagcctgggcaacagagcaagactctgtctcaaaaaaaatgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgt----------gtgtgtctagaatGGTCCACAATATATAGCCAGCTCTAGTCCCAGAAAACCTAGCAACCTTAAGGTCAGAGCTTCTCATTTTGGCCTTTGCAACGTGA i papAnu2.JH684932 I 837 C 0 a score=2730.000000 s hg38.chrUn_GL000218v1 116807 2 + 161147 AA s panTro4.chr3 77191901 2 + 202329955 AA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362555 2 + 202140232 AA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 110763 2 - 139590 AA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 55840 2 + 231459 AA i papAnu2.JH684932 C 0 C 0 s tarSyr2.KE946749v1 102218 2 + 1816639 AA i tarSyr2.KE946749v1 N 0 I 677 a score=27492.000000 s hg38.chrUn_GL000218v1 116809 40 + 161147 TCTCCTTTAGTAGGCCCTTCCCCTCTAGGGAGGTACTTGC s panTro4.chr3 77191903 40 + 202329955 TCTCCTTTAGTAAGCCCTTCCCCTCTAGGGAGATACTTGC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362557 40 + 202140232 TCCCCTTTAGTAAGCCCTTCCCCTCTAGGGAAGTACTTGC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 110765 40 - 139590 TCTCCTTTAGTAAGCCCTTCCCCCCTAGGGAGGTACTTGC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 55842 28 + 231459 TCT------------CCTTCCCCTCTAGGGCGGTACTTGC i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=354.000000 s hg38.chrUn_GL000218v1 116849 5 + 161147 -------------------CGGAG-- s panTro4.chr3 77191943 5 + 202329955 -------------------TGGAG-- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362597 5 + 202140232 -------------------CGGAG-- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 110805 5 - 139590 -------------------TGGAG-- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 55870 5 + 231459 -------------------CGGAG-- i papAnu2.JH684932 C 0 C 0 s otoGar3.GL873601 2036467 26 + 8849790 AGTATAGCCTTGGTGTACGTGAAGAC i otoGar3.GL873601 N 0 N 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=52877.000000 s hg38.chrUn_GL000218v1 116854 65 + 161147 TGCTGCCTGAAGTTGGTTTTCTGATGCCCTGTTGTTTCTGTTCTGAATGGTTTATTTCTCATTAT s panTro4.chr3 77191948 65 + 202329955 CACTGCCTGAAGTTGATTTTCTGATGCCCTGTCGTTTCTGTTCTGAATGGTTTATTTCTCATTAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362602 65 + 202140232 CACTGCCTAAAGTTGGTTTTCTGATGCCCTGTTGTTTCTGTTCTGAATGGTTTATTTCTCATTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 110810 64 - 139590 CACTGCCTGAAGTTGGTTTTCTGATGCTCTGTTGTTTCTGTTCTGAATGGTTTATTTCTC-TTAT i nomLeu3.chr21_GL397661_2_random C 0 I 4088 s papAnu2.JH684932 55875 64 + 231459 CGCTGCCTGGA-TTGGTTTTCTGATGCCCTGTTGTTTCTATTCTGAATGGTTTATTTCTCATTAT i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=98679.000000 s hg38.chrUn_GL000218v1 116919 123 + 161147 AAGAGCTCAGCaaagcaggcagagttaaaaagcagagacatgaaggcttt--aaaatcatggacttcactcctacactgaatctcaggtccccagaaagacagaaacaccatgggacCACAGCAA s panTro4.chr3 77192013 123 + 202329955 AAGAGCTCAGCaaagcaggcagagttaaaaagcaga--catgaagactttttaaaatcgtggacttcattcctgcactgaatctcaggtccccagaaagagagaaacaccatgggacCACAGCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362667 122 + 202140232 AAGAGCTCAGCAAAGCAGGCAGAGTTAAAAAGCAGA--CATGAAAACTTTTTAAAATCGTGGACTTCACTCCTACACTGAA-ATCAGGTCCCCAGAAAGACAGAAACACCATGGGACCACAGCAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 114962 124 - 139590 AAGAGCTCAGCAAAGCAGACAGAGTTAAAAA-CAGAGACATGAAGACTTTTTAAAATCGTGGACTTCACTCCTACACTGAATCTCAAGTCCCCAAAAGGACAGAAACACCATGGGACCACAGCAA i nomLeu3.chr21_GL397661_2_random I 4088 C 0 s papAnu2.JH684932 55939 125 + 231459 AAGGGTTCAGCAAAGCAGGCAGAGTTAAAAAGCAGAGAcatgaagactttttaaaatcgTGGACTTTACTCCTACACTGAACCTCAGGTCCCCAGAAAGACAGGAGCACCATGGGACCACAGCAA i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=1692.000000 s hg38.chrUn_GL000218v1 117042 3 + 161147 AGG s panTro4.chr3 77192136 3 + 202329955 AGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362789 3 + 202140232 AGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 115086 3 - 139590 ATT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 56064 3 + 231459 AGG i papAnu2.JH684932 C 0 C 0 s saiBol1.JH378163 9126681 3 - 14671897 AGA i saiBol1.JH378163 N 0 N 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=11360.000000 s hg38.chrUn_GL000218v1 117045 17 + 161147 CAGAAGGAGGAGTGAGA s panTro4.chr3 77192139 17 + 202329955 CAGAAGGAGGAGTGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362792 17 + 202140232 CAGGAGGAGGAGGGAGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 115089 17 - 139590 CAGAAGGAGGAGTGAGA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 56067 14 + 231459 CAGA---AGGAGTGAGA i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102220 677 + 1816639 I a score=4365.000000 s hg38.chrUn_GL000218v1 117062 3 + 161147 GAG s panTro4.chr3 77192156 3 + 202329955 GAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362809 3 + 202140232 GAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 115106 3 - 139590 GAG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 56081 3 + 231459 GAG i papAnu2.JH684932 C 0 C 0 s tarSyr2.KE946749v1 102897 3 + 1816639 GAG i tarSyr2.KE946749v1 I 677 I 241 a score=167439.000000 s hg38.chrUn_GL000218v1 117065 210 + 161147 GGAGGTGGACAGAACAACAAACAGGAGTTGGCTCTCATTTTTTCACGCGTGCCATTTTCTTTAGGTTTTTCTAGTTTATGGAGTCTCTTTGTTCCAATTGAGCACACAGATAAACTAGAGATCTCAC-AAGGCTTTTGCTGAGAACATCAAAGCCTTTAACCTCTGTTGGGCCAAATA-TTTAGACCAAAAATACAGACAGACACACAAAAG s panTro4.chr3 77192159 211 + 202329955 GGAGGTGGACAGAACAACAAAGAGGAGTTGGCTCTCAATTTTTCACATCTGCCATTTTCTTTAGGTTTTTCTAGTTTATGGAGTCTCTTTGTTCCAATTGAGCACACAGATAAACTAGAGGTCGCAC-AAGCCTTTTGCTGAGACCATCAAAGCCTTTAACCTCTGTTGAGCCAAATATTTTAGACCAAAAATACAGATAGACACACAAAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42362812 211 + 202140232 GGAGGTAGACCGAACAACAAACAGGAGTTGGCTCTCAATTTTTCACATGTGCCATTTTCTTTAGGTTTTTCTAGTTTATGGAGTCTCTTTGTTCCAGTTGAGCACACAGATAAACTAGAGATCTCAC-AAGGCTTTTGCTGAGACCATCAAAGCCTTTAGCCTCTGTTGGGCCAAATATTTTAGACCAAAAATACAGATAGACACACAAAAG i ponAbe2.chr3 C 0 I 26881 s nomLeu3.chr21_GL397661_2_random 115109 211 - 139590 GGAGGTGGACAGAACAACAAACGGGAGTTGGCTCTCAATTTTTCACGTCTGCCATTTTCCTTAATTTTTTCTAGTTTATGGAGTCTCTTTGTTCCAATTGAGCACACAGATAAACTGGAGATCTCACAAAGGCTTTTGCCAAGACCATCAAAGCCTTTGACTTCTGTTGGGCCAAATATTTTAGA-CAAAAATACAGATAGACACACAAAAG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 56084 210 + 231459 GGAGGTGGACAGAAGAGCAAACAGGAGTT-GTTCTAAATTCTTTATGTGTGCCATTTTCTGTAGGTTTTTCTAGTTTATGGAGTCTCTTTGTTCCAACTGAGCACACAGATAAACTAGAGATCTCAC-AAGGCTTTCGTTGAGACCATCACAGCCTTTAACCTCTCTTGGGCCAAATATTTTAGACCAAAAATACAGATAGACACACAAAAG i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102900 241 + 1816639 I a score=10548.000000 s hg38.chrUn_GL000218v1 117275 19 + 161147 CCAGAACCGGACCAGATTG s panTro4.chr3 77192370 19 + 202329955 CCAGAACCAGACCAGATTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 115320 19 - 139590 CCAGAACCAGACCAGATTG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s papAnu2.JH684932 56294 19 + 231459 CCAGAACCAGACCAGATTG i papAnu2.JH684932 C 0 C 0 e tarSyr2.KE946749v1 102900 241 + 1816639 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1862.000000 s hg38.chrUn_GL000218v1 117294 4 + 161147 AGTA s panTro4.chr3 77192389 4 + 202329955 AGTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 115339 4 - 139590 TGTA i nomLeu3.chr21_GL397661_2_random C 0 I 8127 s papAnu2.JH684932 56313 4 + 231459 AGTA i papAnu2.JH684932 C 0 C 0 s tarSyr2.KE946749v1 103141 4 + 1816639 AATG i tarSyr2.KE946749v1 I 241 N 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=95711.000000 s hg38.chrUn_GL000218v1 117298 420 + 161147 GCTTAGTGGCTACAGCCTTTATTCCCTTTATTCTTTAGGATACGAACTCAAACCAGATTCAGGGTTCTAACCCAACCAGGACCCCCCTGGGGTGAAACTGAAACCCCACAGTCTAGACAAGGTTGGGGGTCtttttttat-------tt-tttatttttttgagatggagtttcactcttgttgcccaggctggagtgcaatgtt-gcaatattgcctcaccgcaacctccgcctctcaggtttaagcacttatcctgcctcagcctccca---agctgggattacaggcttgtgccaccacgcccagctcattttgcatttttagtagagacggggtttctccatgttggtcaggctggtctcgaactcccaacctcgggtgatccgcacacgtaagcctcccaaagtgttgacattacaggcatgagcca s panTro4.chr3 77192393 430 + 202329955 TCTCAGTGGCTGCAGCCTTTATTCCCTTTATTCTTTAGGATTAGAACTCAAACCAGATTCAGGGTTCTAACCCAACCAGGACCCCCCTGGGGTGAAACTGAAACCCCACAGTCTAGACAAGGTTGGGGGTCtttttttatttttttatt-tttatttttttgagacggagtttcactcttgttgcccaggctggagtgcagtggt-gcaatatcgcctcaccacaacctccacctctcgggtttaagcacttatcctgcctcagcctcccaagtagctgggattacaggcatgtgctaccatgcctggctaagtttgtatttttagtagagacggggtttctccatgttggtcaggctggtctcaaactcccaacctcaggtgatccacccgtctaagccccccaaagtgttgggattataggcatgagcca i panTro4.chr3 C 0 C 0 s papAnu2.JH684932 56317 431 + 231459 TCTCAGTGACTGCAGCCTTTATTCACTTTATTCTTTAGGATTTGAACTCAAACCAGATGCAGGGTTCTAACCCAACCAGGATCCCCCTGGGGTGAGACTGAAA-CGCACAGTCTAGACAAGGGTGGgggtctttttttaatcttttgttggttttttttttgagacggagtttcgctcttgttgcccaggctggagagcaatggtagCAATatcggctcaatgcagcctccgcctcccgggttcaagcacgtatcctgcttcagcctcccaagtagctgggattacaggcacccgccaccgcgcccgactaattttgtatttttagtagagacggggtttctccatgttggtcaggctggtcttgagctcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagcca i papAnu2.JH684932 C 0 N 0 e nomLeu3.chr21_GL397661_2_random 115343 8127 - 139590 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=267671.000000 s hg38.chrUn_GL000218v1 117718 3229 + 161147 ccgtgcccggccTGCTTGTTCTTTTCATTTCATCCTGATCTCCGAATACAGGAGAGTAGCTGATTTGGTGTTCACTAACAAGCACAGAAGCTTTGTTACATTTACAGTGTCATTCTTGGCAAAACCTGaagttttgcctcctggattcacgccattctcctgcctcagcctcctgagtagctgggactataggcgcccgccacctcacccagctaattttttgtatttttagtagagacggggttttgccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcccacctcggccttccagagtgctgggattacaggcgtgagccaccgcgcccagccAGAAGCTC--TAATTTCAATGATGATTGTGCTTTTTCtctcttcctcagcatctggctcatgataaaatttcaggtgtcttgatggtatctaaatcagttgttgattcagtcctggagaaacacaagcataacctctatgccaagttataattttacctatttcccaactttttgttattggatctctccaccaaaccagttggtctgcttctgtctttgcagctggtttctgtagatgctgttcagctgctggtaacatctggcctttgggcaggctcaaaaatttgaaagttaataatgcaagattcaattgtgtatgggctatcccataatccctgtttctcccccgtttttgtttttAttatcagttgttcatctgtatcaaatcttaactgagcattttcaattaactgtgtggaatgacccatgtatgaagaatcagaaatcacattaacaggcatatcaaaagcagtcaacacctcaattacagctacaagctccgccttttgagctgaagtatagggtgtctggaaaactttagcttttgatccagaataagaacctttaccattactagacccatctgtgaaacaatgaaaacgcttagcaggctgcaggttgtttactgcaggaattgtaaatgcaaaccgttcacagtcttgctcagctaaaaggatagtaaagaaacagtcttttaaatctgtgattattaaaggccaattttttggaattatagta-gagaagggaatcctggctgttatatttccataggttgtataactgaattgatggctcttaagtcagttaacattctccatttacctgattttttcttaattatgaaaactggagaattccaaggggaaaatgttggagtcatgtgcccattttctaattgttcagtaactaatttctctaaagcatccagtttccctttgcttagcagccattattctatccaaattggcttatctgttaaccattttaaaggtataggttctggaggcttaactatggccaccatcaaaaatggtatcctaatctttggcaggaactttgtctttccgtttgaagcagttctttcaaaccttgcaattttttttctactcctataccagggaaatgccccattttgtgcatcatatgttgactttgagggctgtataattgttatggaattagaacttgtgctccccattgtcataataaatctctcccccataaatttataggtacagaagttgcaattggttgaacagtcccaggttgtccattgggcccttcacaatgcaaagtatagctactctgatacacttctggagctttagcagtttccactgtgttaaattgagtgggctgaattggccacatggacggccagtgctgtagagaaataattgaaatgtccactcctaccaaaaaaaaaaaaatagtatctaccaaacctttaaagttctttccctggatagttatttcacagataggatgtttatcagtaatttgatttacccaataagctgccttgccttttttatttgtgcttccaaatcctccagttcatttaatttcactttttcccattcccacatacggctcactcaggagc----tgtgctatgcgcactcctggctgtgctttccagggaacagaactaaatatcacaatttgaatttcctcattgtaatctgaatcaatgactccagtgtgtatttgtaccccttttaaacttaaactagaccttcctaaaagtaatcccattgtccctcctggcaacggtccacagactcctgttgggaccttttgcgggggttccccaggcagaaggctcacagcttttgtgcagcatagatctactgcagcactatgggctgtggtggggaa-agataacgtatgggggtgagggaatggcctgagatggaaatgccctggtttagaacagggcctgggatgggcccctcagggagttttccaaaatcgggttcccttctttatcaaacttagagtgacactgattagcccaaagttttccttttttacattttggacatatttcaggatcagcagttttgttttttcccctatctggtggcctgactcggtgattttttttttttacattctttttagtatgaccatgcttcccacagttaaaacaagctccaggaaatagagtatttcctttatccactctcagtcctgccatcgcctgtgccaacaaagtagctttatgtagattatctctgatatcatcacaggccttgttataatcaactaaatgtgctttccctctgataggtcgcagagcagcctggcaataaggattagcattgtc-aaaaccaataactgcaacactatatcctaagcagccaaatctgcaatcatctttttaagagactcctgtaaccaagctataaaatccacatatggttctcttggtccctgttttatagcactaaaggaagggtattgttctccacatgaagtgatttatt--ccaagctctaatgcacacttctctaagctgttctatggcatcatcctgcatgaccacttgtgcatgtaaaccagcccagccaccaacccccaaaagttggtctgcagttatattaatttgaggttgggcccaggcattgcgagcagcctgaatggaagcttcatctgcctactaagttttaaattgtaagaactgagcaggagttagacaagctagagtaaaagtgtcccagtcagtaggaatcatccgactggaaacagcaacattctttaacagtcccatttcaaaaggagaacctggtccatactgatttatagcttgtttaatttttttgagtaatttaaaaggaaaaggctcaaatgtagctataatatttccctgttgatctggggg s panTro4.chr3 77192823 3228 + 202329955 ccgcacctggccTGCTTGTTCTTTTCATTTCATCCTGATGTGCGAATACAGGAGAGTGGCTGAGTTGGTGTTCACTAACAAGCACGGAAGCTTTGTTACATTTACAGTGTCATTCTTGGCAAAACCTGaagttttacctgccgggtgcatgccattctcctgcctcagcctcctgagtagctgggactataggcacccgccaccttgcccagttaattttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctgaccttatgatccacccaccttggcctcccagagtgctgggattacaggtgtgagccaccgcgcccagccAgaagctctgtaatttcaatgatgattgtgcttttaatctctttctcggcatctggctcatgataaagtttcaggtgtcttgatggtatctaaatcagctgttgattcggtcctggagaaacacaagcataacctcaatgccaagttattattttacctatttcccaactttttgttattagatctctccaccaaaccagttgttctgcttctgtctttgcagctgttttctgtagatgctgttcagctgctgataacatctggcctttgggcaggctcaaaaaattgaaagttaataatgctagattcaattgtgtatgggctgtcccataatccctctgtctcccccttttttgtttttAttattagttgttcatctgtatgaaatcataactgagcattttcaattagctgtgtggaatgaaccatgtatgaagaatcagaaatcacattaataggcatatcaaaagcagtcaatacctcaattacagctataaactccactttttgagctgaagtatacggtgtctggaaaactttaccttttgatccagaataagaagctttaccattactagacccatctgtgaaacaatgaaaatgcttagcaggctgcaggttgtttactgcaggaattgtaaatgcaaactgtt--cagtcttgctcagctaaaagggtagtaaagaaacagtcttttaaatctatgactattaaaggacaattttttggaattatagtaggagaaggcaatcctggctgttacactcccataggttgtataactgaattgatggctcttaagtcaattaacattctccatttacctgatttttttttaattacaaaaactggagaattccaaggggaaaatgttggagctacgtgcccattttctaattgttcagtaactaatttctctaaagcctccagtttctctttgcttagcagccattattctatccaagttggcttatctgttaaccattttaaaggtataggttctggaggcttaacaatggccaccatcaaaagtgatatcctaatctttggcaggaactttgtctttccacttgaagcagttctttcaaactttgcaaatttttttctactcccaaaccagggacatgccccattttgtgcatcatatgttgactttgagggccgtataattgttacggaatgagagcttgtgctccgcgttgttgtaataaatctctcccctataaatttataggtacagaggttataattcattgaaaagtcccaggttgtctgtcgggcccttcacaatacaaaatatagctactttgatatatttctggggctttaccaacttcgactatgttaaattgagtgggttgaattggccacgtggacggccagtgctgtagagaaatgattgaaatgtctgcttctacc------aaaaaaatagtatctaccaaacctttaaagttctttccctggatagttatttcacaggtaggatgtttatcagtaattggatttacccaataagctgctttcccttttttatttgtgcttccaaatcctcctgttcatttaatttcactttttcccatccccacatacagcacaatcaggagctgattgtgctatgcgcactcctggctctgctttccagggaacagaagtagatataacaatttgaatttcctcattgtaatctgaatcaatgactccagtgtgtatttgtaccccttttaaacttaaactagaccttcctaaaagtaatcctattgtccctgctggcaatggtccacagactgctgttgggaccttttgcaggggttccccaggcagaaggctcacagcttttgtgcaacataaatctactatggcactatgggctgtggcgggggacagacaatgtatgggggtgagggaatggcctgagctggaaatgccctggtttagaacagggcctgggatgggcccctcagggagtttcccgaaatcaggttcccttctttatcaaacttagagtgacactgattagcccaatgttttccttttttacattttggacatatttcaggatcagcagttttcttttttcccttatctggtggcctgactcactga----ttttttctatattctttttagtatgaccatgcttcccacagttaaaactagctccaggaaatggagtatttcctttatccactctcagtcctgccatcgcctgtgccaacaaagtagctttatgcagattacctctgataccatcacaggccttgaaataatcaactgaatgtgctttccctctgataggtcacagagcagcctggcaatcgggattagcattgttgaaagctaattactgcaacactatatcctgagcagccaaatctgtgatcatctttttaagagactcatgtaaccaagctataaaatgcacgtgtggttctcttggtccctgttttatagcactaaaggaagggtattgttccccacctgaagtgatttttttcccaagctctaatgcacgttcttctaagctgttctagggcatcatcctgcctgaccagttgtgcatccaaaccagcccagccaccaacccccaaaagttggtctgcagttatattaatttgaggttaggcccaggcattgcaagcagcctgaatggaagcttcatctgcccaccaagttttaaattgtaagaacagagcaggagttagacaagctcaagtaagagcatcccagtcagtaggaatcatccaactggaaacagcaacattctttaacagtcccattacaaaaggagaacctggtccatattgatttatggcttgtttaaattttttgagtaatttaaaaggaaaaggctcaaatgtagctataatatttccctgttgatctggggg i panTro4.chr3 C 0 I 2905 e nomLeu3.chr21_GL397661_2_random 115343 8127 - 139590 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=0.000000 s hg38.chrUn_GL000218v1 120947 970 + 161147 gtgtattcaaacagggaactgccaagcctctaaatcccacttttgtctagcttgctgtattcctgcctgaatagaactaagagcagtcgctcaaggcgctgctcgaacagtcaccagggcaactacttttcacccagtgtcctccagaaaagaaagatctggagggtcgttttcttcaaaatagtaatgagggtgtgcagaaggatagggatgaacctctccctccttttctgctttagctttaggtgacaaataaacctggtctgtaacctctactgttactttgttatactctccttcctcctcatcatcagtgtgaaaaagttccaaggtagaacgaaccacagcccacacttgtcctattgctaccctgatgcttccgagctccccttcttactcaccacggggattgctttaagagtactcgggtgtcctccagctagttccacattctccaatcgttgctccagcgatcctttgacctgtatttgagcccccatgaatgggcaccacttgctgagaccaggtcggttggagagaccctaacccagcagcactagaggaattaaagacacacacacagaaatatagaggtgtgaagtgggaaatcggggggggggggcgggtcttacagccttcagagcagagccctgaacagagatttacccacgtatttattaacagcaagccagtcattagcattgtttctatagatattagattaactaaaagtatcccttattcttaaggcacagatcactcatgctattgtttgtggcttaagaatgcctttaagtggttttccaccctggacgggccaggtattccttgttctcattccagtaaacccacaaccttccagcctgggtgttatggccatcatgaacatgtcacagtgctgcagagattttgtttatggccagttttggggccagtttatggccagatttggggaggcttgttcccaaca e nomLeu3.chr21_GL397661_2_random 115343 8127 - 139590 I e ponAbe2.chr3 42363023 26881 + 202140232 I e panTro4.chr3 77196051 2905 + 202329955 I a score=413347.000000 s hg38.chrUn_GL000218v1 121917 1650 + 161147 gttcctcagggtaagggtgccctaactcctgtggggaccttctttggtggctccccaggaagtaaggagatgggaattgtgctgtagaggtctacagcagcactgcttgctgaggcgggggacaattgctgtacatatgtaagggcagtggctgtgctgggtatgcctcagtttgttgaggggcttgaggcgggtccctcttcctatttcctgaaagaggttgtccatctttgctaaatttagaatgacacggacttgcccagtgattgcctttcttacaccagggacgtacgttgggacttttctgttgattgatggtagtagttttcgtcttttgaattcc-tttctacattcctttct--tgtgtccaatttgcccacaattaagtcaagagcctgagaaatgaagcatattttttcttactcttaatctagccacagcctgagctaaaagaataaccttatgtaagttatctccaatgccatcgcaagccttaatatatttagttaaatgggccctctctgtctgggatctaatagcagtttgacactctgcattagcattattgtatgcaagaagctgtattacaacatcctgagctgttttgatcatttgaggctttatacacagcctcttggagctgagcaataaaattaatatatggttctttaggtccttgtcagacagaactgaaataaggatacttttccccggtaacatttatccttttctatgcatgtaagcacatgaagcacagctgaacaatggcaacatcttccattagtgcttgattctctaatcaaccccagttagggccaactcatattaactgatcaaagaaaacaggcacaggtggctgcacttgtgtgttttcttttgcctgagtttgagcttcatcagcctaccaagttttaaactgcaagtactgagatggagtgagaacaggttttgtcaaagtatcctaattatatggtagtaatctattatcaagagccatatttttaaataaagtttgcacaaaaagagagttcagtccatattgactaatggcttgcttaaattctttagtaacttaaaagagaaagcagcctaattagctatattctgtcctacttgctggattatagtaacgggaaattgccatgcttcaaggtctcccttggctttagctttttgaatagaattttgtctaccaccaccaattgctccaggttttaatgttgtaactacaggagcagtaagtttttcagctaattgattttctcacccatttagaggagagagaggaggtggccattcacttaattcagcaggtggagccaacgggctagtaaaacatacttttaaaagtttttctttcttttctttaatctcctctggtagctgctccccacactcagaatttgaagttagttttttacactcatcctcctcttcctcatctgagtctgcctcatcatctgtttgaaatggctcaagggctgcctttattagtgcccacactgaccatacagaaactagaatttctgctccatctttatatgccttttaaaaaatctcttccaattctctcccattcatccaacttcatagtcctttgttctggaaaccatgggcaaaactgctttactgtactaaagagtgataacaaa s macFas5.chr2 142363 1650 - 192460366 gttcctgagggtacgggtcccctaactcctgtgaggaccttctttggtggctcactaggaagtaacgagatgggaattgtgctgtagaggtctacagcagcactgcttgctgagacaggtgacaattgttgtatatttgtaagggcactggctgtgctgagtatgcctcggttcgttgaggggctcaaggtgggtctctcttcctagttcctgaaagagattgtccatctttgctaaatttagaatgacactgacttgcctagtgattgcctttcttaaacggggggcatacaccaggacttttctgttgattgatggtagtagtttttgtctttttatttccttttctacattcctttcttgtgtgtccaaattgcccacaattaaggcaagagcctgagatatggggcatattttttcttactcttaatctagccatagcctgagctaaaagagtagccttatgtaagttacctccaatgccatcgcaagtcttaatatatttagttaaataagccttctctctcaggggtctaatagtagtttgacgctctgcattagcattattgcatgcaagaagctatattacaacatcctgagccatttt-atcgtttatggctttatacacagcctcttggagctgagcaataaaattaatatatggttttttaggtccttgtgggacagaactgaaataaggatatattttccctgtaacatttatccttttctatgcctgtaagcacacaaagcacagctgaacaatggcaacatccttcattactgcttgattctctaattgacctcaattagggccaactactaataactgatcaaagaaaagaggcacaggaggctgcacttgtatgttttcctttgcctgagtttaagcttcatcagcctaccaggttttaaactgcaagtactgacatggagtgagaacagattttgttgacgtatcctaattatatggtattaatccattatcaagagccatattttttaataaagtttgcacaaaaagagagtttgatccatattgactaatggcttgcttaaattctttagtaacttaaaagaaaaagcagcctaattagctatattctgtcctccttgctggattatagtaatgggaaattgccatgcttcaaggtctcccttggctctagctttttgaatagaattttgtacagcaccaccaattgctccaggttttaatgttacaactataggaacagtaagttttacagctaatttatttcctca-ccattaaggggagagagaggaggtggccattcacttaattcagcaggtggagccgatgggctagtaaaacatactttttttagttttcctttcgtttctttaatctcctctggtagctgttcctcacactcagaatttgaagttagttttttatactcatcctcctctttctcatctgagtctgcctcatcatctatttgaaatagctcaagggttgcctttattagcacccacattgaccaaacagaaactggaatttctgctccatctttatacgcctttt-taaaatctcttccaattctctcccattcatccaacttcatagtcctttgttctggacaccatgggcaaaacttctttactgtactaaagactgttaacaaa i macFas5.chr2 N 0 C 0 s papAnu2.chr2 88734 1649 + 187378091 GTTCCTGAGGGTACGGGTCCCCTAACTCCTGTGAGGACCTTCTTTGGTGGCTCACCAGGAAGTAAGGAGATGGGAATTGTGCTGTAGAGGTCTACAGCAGCACTCCTTGCTGAGACAGGTGACAATTGTTGTATATTTGTAAGGGTACTGGCTGTGCTGAGTATGCCTCGGTTCGTTGAGGGGCTCAAGGTGGGTCTCTCTTCCTATTTCCTGAAAGAGATTGTCCATCTTTGCTAAGGTTAGAATGACACTGACTTGCCTAGTGATTGCCTTTCTTAAACTGGGGGCATACGCCAGGACTTTTCTGTTGATTGATGGtagtagtttttgtctttttatttccttttctacattCCTTTCTTGTGTGTCCAAATAGCCCACAATTAAGGCAAGAGCCTGAGATATGGGGCatattttttcttactcttaATCTAGCCATAGCCTGAGCTAAAAGAGTAGCCTTATGTAAGTTACCTCCAATGCCATCGCAAGTcttaatatttttagttaaataaGCCTTCTCTCTCAGGGGTCTAATAGCAGTTTGACACTCTGCATTAGCATTATTGCATGCAAGAAGCTATATTACAACATCCTGAGCCATTTT-ATCATTTATGGCTTTATACACAGCCTCTTGGAGCTGagcaataaaattaatatatggtTTTTTAGGTCCTTGTGGGACAGAACTGAAATAAGGATATATTTTCCCTGTAACATTTATCCTTTTCTATGCCTGTAAGCACACAAAGCACAGCTGAACAATGGCAACATCCTCCATTACTGCTTGAGTCTCTAATTGACCCCAATTAGGGCCAACTACTACTAACTGATCAAAGAAAAGAGGCACAGGAGGCTGCA-TTGTATGTTTTCCTTTGCCTGAGTTTAAGCTTCATCAGCCTACCAGGTTTTAAACTGCAAGTACTGACATGGAGTGAGAACAGATTTTGTTGAAGTATCCTAATTATATGGTATTAATCCATTATCAAGAgccatattttttaataaagtttgcACAAAAAGAGAGTTTGATCCATATTGACTAATGGCTTGCTTAAATTCTTTagtaacttaaaagaaaaagcagcctAATTAGCTATATTCTGTCCTCCTTGCTGGATTATAGTAATGGGAAATTGCCATGCTTCAAGGTCTCCCTTGGCTCTAGCTTTTTGAATAGAATTTTGTGCAGCACCACCAATTGCTCCAGGTTTTAATGTTACAACTATAGGAACAGTAAGTTTTACAGCTAATTTATTTCCTCA-CCAttaaggggagagagaggaggtggccATTCACTTAATTCAGCAGGTGGAGCCGATGGGCAagtaaaacatactttttttagttttcctttcgTTGCTTTAGTCTCCTCTGGTAGCTGTTCCTCACACTCAGAATTTGAAGTTAGTTTTTTATACTCATCCTCCTCTTTCTCATCTGAGTCTGCCTCATCATCTATTTGAAATAGCTCAAGGGTTGCCTTTATTAGCACCCACATTGACCAAACAGAAACTGGAATTTCTGCTCCATCTTTATAcgcctttt-taaaatctcttccaaTTCTCTCCCATTTGTCCAACTTCATAGTCCTTTGTTCTGGACACCATGGGCAAAACTGCTTTACTGTACTAAAGACTGTTAACAAA i papAnu2.chr2 N 0 C 0 e nomLeu3.chr21_GL397661_2_random 115343 8127 - 139590 I e ponAbe2.chr3 42363023 26881 + 202140232 I e panTro4.chr3 77196051 2905 + 202329955 I a score=9125.000000 s hg38.chrUn_GL000218v1 123567 33 + 161147 ttctaagtactaattttcattccccatctttgt s nomLeu3.chr21_GL397661_2_random 123470 33 - 139590 ttctgagcactcggctttcccacccatcttctt i nomLeu3.chr21_GL397661_2_random I 8127 I 4 s macFas5.chr2 144013 29 - 192460366 ttctgagtact----ttcactccccctctttgt i macFas5.chr2 C 0 I 106 s papAnu2.chr2 90383 29 + 187378091 TTCTGAGTACT----TTCACTCCCCCTCTTTGT i papAnu2.chr2 C 0 I 106 e ponAbe2.chr3 42363023 26881 + 202140232 I e panTro4.chr3 77196051 2905 + 202329955 I a score=22204.000000 s hg38.chrUn_GL000218v1 123600 45 + 161147 atgtcctcgggtgtcttttgatgttgtgtcctctgctttcacatg s panTro4.chr3 77198956 45 + 202329955 atgtccccaggtgtcttttgatgatgtgtcctctgctttcacatg i panTro4.chr3 I 2905 C 0 s nomLeu3.chr21_GL397661_2_random 123507 45 - 139590 atttcctctggtgtcttttgatgatgtgtcctctgctttcacatg i nomLeu3.chr21_GL397661_2_random I 4 C 0 s macFas5.chr2 144148 35 - 192460366 acatcctcaggtgtcttttgatgatgtgtca--------caca-- i macFas5.chr2 I 106 C 0 s papAnu2.chr2 90518 35 + 187378091 ACATCCTCAGGTGACTTTTGATGACGTGTCA--------CACA-- i papAnu2.chr2 I 106 C 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=343905.000000 s hg38.chrUn_GL000218v1 123645 289 + 161147 ctccagccttccttcaccggg-tctttgtcaccccatgttgggcgccaggaatgttggggtgatcagacccaacactaggtcatgggggtgatgaagtccggcagagtcaaaggaatgagaaaaagacagtttgagagagaaagtgggaccaggagaccatcacgagtgtggagtctgcaaagtccccaagctctgggagcccacgctatttgttggtgctcaaacaaa----caggtggtgaggatttaggggttgaaaggaaacggtgtatcaagtgaatgagaaacatatg s panTro4.chr3 77199001 294 + 202329955 ctctagccttccttcaccggggtctttgttgccccatgttgggcacccggaatgttggggtgatcagacccaacactaggttgtgggggtgacaaagtccggtagagtcaaaggaatgagaaaaagacagtttgagagagaaagtgggaccaggggaccatcacaagtgtggagtctgcgaagtccccaagctctgggagcccatgctatttattggcgctcaaacaaagaaacaggtggtgaggatgtggaggttgaaaggaaacggtgtatcaagtgaatgagaaacatatg i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 123552 293 - 139590 ctctagccttccttcaccggggtctttgtggccccatgttgggcaccaggaatgttggggtgatcagacccaacactaggtcgtgggggcgacaaagtccggtggagtcaaaggaatgagaaaaagacagtttgagagagaaagtgggaccaggggaccatcacgagtgtggagtctgcgaagt-cccaagctctgggagcccacgctatttattggtgctcaagcaaagaaacaggtggtgaggatgtgggggttgaaaggaaatggtgtatcaagtgaatgagaaacatatg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 121402 288 + 192599291 ctctagcattccttcaccggggtctttgttgccccatgttaagagccaggaaAgttggagtgatcagacccaacactaggtcgtgggggtgatgaagtctggtggagtcaaaggagtgag--aaagacagtttgagagagaaagtgggaccaggggaccatcgcgagtgtggtggctgtgaagactctgagctctgggagctgacgttatttattggtgctcaaagaaa----taggtggtgagtatgtctgggttgaaaggaaatggtgtctcaagtgaatgagaaacatatg i rheMac3.chr2 N 0 I 60 s macFas5.chr2 144183 288 - 192460366 ctctagcattccttcaccggggtctttgttgccccatgttaagagccaggaaAgttggagtgatcagacccaacactaggtcgtgggggtgatgaagtccggtggagtcaaaggagtgag--aaagacagtttgagagagaaagtgggaccaggggaccatcgcgagtgtggtggctgtgaagactctgagctctgggagctgacgttatttattggtgctcaaagaaa----taggtggtgagtatgtctgggttgaaaggaaatggtgtctcaagtgaatgagaaacatatg i macFas5.chr2 C 0 I 60 s papAnu2.chr2 90553 288 + 187378091 CTCTAGCATTCCTTCACCGGGGTCTTTGTTGCCCCATGTTGAGAGCCAGGAAAGTTGgagtgatcagacccaacactaGGTCGTGGGGGTGATGAAGTCTGGTGGAGTCAAAGGAGTGAG--AAAGACAGTTTGAAAGAGAAAGTGGGACCAGGGGACCATCGCGAGTGTGGTGGCTGTGAAGACTCTGAGCTCTGGGAGCTGACGTTATTTATTGGTGCTCAAAGAAA----TAGGTGGTGAGTATGTCTGGGTTGAAAGGAAATGGTGTCTCAAGTGAATGAGAAACATAtg i papAnu2.chr2 C 0 I 60 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1401818.000000 s hg38.chrUn_GL000218v1 123934 834 + 161147 gccctgcctcagcttctcttccaacactcagcttttctcccaACAcattccccttatgaacaggaataaaataggga----tgcctgttctcaccactcctgtttaacaagtcctagccagagaaatcag---------------------------gcaagagaaagctataaaaggcatccaaataggaaatgaagtcaaattatctctcttcactgatgatatgattctacacctagaaatccctaaagactgtgccaaaaggctcctagaactgataaaaaaaacttcagcaaactttgaggattaaaa-aaaatcaacatatagaaagaa------------------------gtatcatttctgtacaccaaaaatgtttaaactgagaggtaaatcaagagtgcaatcctgtttacaacagcaacccc----caaaataaaataaaagaaaa---------------gaagaatatgtctaagcaaggaggtaaaggatatctaaaaggagaagtacgaaacactgcagaaagaaatcatagatgaca-aagcaaatggaaaactattccatgctcatggattagaaagatcaatattg-----ttaaaatggct-atactgccaaaagcaatctacacattcaacactattcctatgaaacaaccaatgtc-gtttttc--------acagaattag---aaaaaaaatattctaaatttcatatggatttttaaagagcccagacaaccaaaggaaacctaagcaagaagaa-caaagctggagacatcacattacttgacttcatactataccctaaggccacaatagacaaaatagcatggtagcgatatgaaaacagacacaaagaccaatgaaacagaatagagaacccgaaaataaaca--tgcacctacagccat s panTro4.chr3 77199295 851 + 202329955 gccctgcctcagcttctctcccaacactcagcttttctcccaACAcattccccttaagaacaggaataaaataggga----tgcctgttctcaccactcctgttcaacaagtcctagccagagcaatcag---------------------------gcaagagaaagagataaaaggcatccaaataggaaatgaaatcaaattatctctcttcactgatgatatgattctacacctagaaaaccataaagactgtgccaaaaggctcctagaactgataaacaa--cttcagcaaagtttcaggattaaaa-aaaatcaacatacaaaaagaa------------------------gtagcatttccatacagcaaaaatgtttaaactgagaggtaaatcaagaatgcaatcctgtttacaatagcaacccc----caaaatagaataaaataaaataaaataaaataaagcaagaatatgtctaaccaaggaggtaaaggatatctaagaggagaactacaaaacactgcagaaagaaatcatagatgaca-aaacaaatggaaaaccattccatgcttacggattagaaagatcaatattg-----ttaaaatggcttatactgccaaaagcaatctacacattcaacactattcctatcaaacaaccaatgtc-atttttt--------acagaattag---aaaaaaactattctaaatttcatatggatttttaaagagcccagacaaccaaaggaaacctaagcaaaaaaaaacaaagctggagacatcacattacttgacttcatactatactctaaggccacagtagacaaagtagcatggtactgatatgaaaacagacacaaagaccaatgaaacagaatagagaaccccaaaataaacacatgcacctacagccat i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 123845 886 - 139590 gccctgcctcagcttctctccgaacactcagcgtttctcccaACAcattctccttaagaacaggaataaaataggga----tggctgttctcaccactcctgttcaacaagtcctagccacagcagtcaggcaagagaaagagataaaaggcatccagcaagagaaagagataaaaggcatccaaataggaaatgaagtcaaattatctctcttcactgatgatatgattctacacctagaaaaccctaaagactgtgccaaaagactcctagaactgataagcaa--cttcagcaaagtttcaggataaaag-aaaatcaacattcaaaaagaagtagcatttctgtacaccaaaaatgtagcatttctgtacaccaaaaatgtttaaacagagaggtaaataaagaatgcaatcctgtttacaatagcaacccc----caaaataaaataaaataaaa---------------caagaatatgtctaaccaaggaggtaaaggatatctaagaggagaactacaaaacactgcagaaagaaatcgtagatgaca-aaac-aatggaaaaccattccattctcatggattagaaagatcaatattgttacattaaaatggct-ataatgccaaaagcaatctacaaattcaacactattcctatcaaacaatcaatgtctttttttt--------acagaattag--aaaaaaaactattctaaatttcatatggatttttaaagagcccagacagccaaaggaaacctaagcaaaaagaa-caaagctgcagacatcacattacttgacttcatactg-----taaggccacaatagacaaaatagcatggtattgatatgaaaacagacacaaagaccaatgaaacagaatagagaaccccaaaataaacacatgcacctacagccat i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 121750 846 + 192599291 gccttgcctcagcttctctcccatcactcagtttttatcccaACAcattccccttaagaacaggaataaaataggga----tgcctgttcttaccactcctgttcaacaagtcctagccagagtaatcag---------------------------gcaagagaaagagataaaaggcatcaaaataggaaataaagtcaaattatctttcttcactgatgatatgattctatacatagaaaaccctaaagaccatgctaaaaggttcctagaactgataaacaa--cttcagcaaagtttcaggattaaaataaaatcaacaaacaaatagaa------------------------gtaacatttctgtacaccaaaaatgtttaaactgagaggtaaatcaagaatgcaatcctgtttacaatagcaacctc----caaaataagataaaataaaa---------------caagagtatgtctaaccaaggaggtaaaggatatctaagaggagaactacaaaacactgcagaaagaaatcaaagatgacacaaacaaatggaaaagcattccatgctcatggatagaaacaatcaatattg-----ttaaaacggcc-atactgcctaaagcaatttaccgattctgttctattcctatcacactaccaatgat-gtttttttcacagaatcagaattag--aaaaaaaaatattctaaaattcatatggatttttaaagagcccagaaaaccaaaggaaacctaagcaaaaaagaacaaagttggagacatcacattacttgacttcatactatactctaaggccacagtagacaaaacagcatggtactgatatgaaaacagacacaaagaccaatgaaacagaatagagaaccccaaaataaacacatgcacatacagccat i rheMac3.chr2 I 60 C 0 s macFas5.chr2 144531 837 - 192460366 gccttgcctcagcttctctcccatcactcagtttttatcccaACAcattccccttaagaacaggaataaaataggga----tgcctgttcttaccactcctgttcaacaagtcctagccagagtaatcag---------------------------gcaagagaaagagataaaaggcatcaaaataggaaataaagtcaaattatctttcttcactgatgatatgattctatacatagaaaaccctaaagaccatgctaaaaggttcctagaactgataaacaa--cttcagcaaagtttcaggattaaaataaaatcaacaaacaaatagaa------------------------gtaacatttctgtacaccaaaaatgtttaaactgagaggtaaatcaagaatgcaatcctgtttacaatagcaacctc----caaaataagataaaataaaa---------------caagaatatgtctaaccaaggaggtaaaggatatctaagaggagaactacaaaacactgcagaaagaaatcatagatgaca-aaacaaatggaaaaccattccatgctcatggattagaaggatcaatattg-----ttaaaatggct-atactgccaaaagcaatctacacattcaacactattcctatcaaacaaccaatgtc-atttttc--------acaaaattag--aaaaaaaattattctaaaattcatatggatttttaaagagcccagaaaacaaaaggaaacctaagcaaaaaagaacaaagttggagacatcacattacttgacttcatactatactctaaagccacagtagacaaaacagcatggtactgatatgaaaacagacacaaagaccaatgaaacagaatagagaaccccaaaataaacacatgcacatacagccat i macFas5.chr2 I 60 C 0 s papAnu2.chr2 90901 825 + 187378091 GCCTTGCCTCAGCTTTTCTCCCATCACTCAGTTTTTATCCCAACACATTCCCCTTAAGAACAGGAATAAAATAGGCA----TGCCTATTcttaccactcctgttcaacaagtcctagccagagtaatcag---------------------------gcaagagaaagagataaaaggcatcaaaataggaaataaagtcaaattatctctcgtcactgatgatatgattctacacatagaaaaccctaaagaccaTGCTAAAAGtttcctagaactgataaacaa--cttcagcaaagtttcaggattaaaataaaatcaacaaacaaatagaa------------------------gTAACATTTCTGCAcatcaaaaatgtttaaactgagaggtaaatcaagaatgcaatcctgtttacaatagcaacctc----caaaataaaataaaataaaa---------------caagaatatgtctaaccaaggaggtaaaggATATCTaagaggagaactacaaaacactgcagaaa------------gaca-aaacaaatggaaaactattccatgctcatggattagaaggataaatactg-----ttaaaatggct-atactgccaaaagcaatctacacattcaacactattcctatcaaacaaccaatgtc-atttttc--------acagaattag--aaaaaaaattgttctaaaattcatatggatttttaaagagcccagaaaaccaaaggaaacctaagcaaaaaagaacaaagttggagacatcacattacttgacttcataCTATACTCTAAGGCCACAGTAgacaaaatagcatggtactgatatgaaaacagacacaaagaccaatgaaacagaatagagaaccccaaaataaacacatgcacatacagcCAT i papAnu2.chr2 I 60 C 0 s chlSab2.chr22 38664 846 - 101219884 gccttgcctcagcttctctcccatcactcagtttttatcccaACAcattccccttaagaacaggaataaaatagggatgcctgcctgttcttaccactcctgttcaacaagtcctagccagagcaatcag---------------------------gcaagagaaagagataaaaggcatcaaaataggaaataaagtcaaattatctctcttcactgatgatatgattctacacatagaaaaccctaaagaccatgccaaaaggttcctagaactgataaacaa--cttcagcaaagtttcaggattaaaataaaatcagcaaacaaatagaa------------------------gtaacatttctgtacaccaaaaatgtttaaactgagaggtaaatcaagaatgcaattctgtttacaatagcaaccccaaaataaaataaaataaaataaaa---------------caagaatatgtctatccaaggaggtaaaggatatctaagaggagaactacaaaacactgcagaaagaaatcatagatgaca-aaacaaatggaaaaccattcca-gctcatggattagaaggatcaatatcg-----ctaaaatggct-atactgccaaaagcaatctacacattcaacactattcctatcaaacaaccaatgtc-atttttc--------acagaattagaaaaaaaaaattgttctaaaattcatatagatttttaaagagcccagaaaaccaaaggaaacctaagcaaaaaagaacaaagttggagacatcacattacttgacttcatactatactctaaggccacagtagacaaaacagcatggtactgatatgaaaacagacacaaagagcaatgaaacagaatagagaaccccaaaataaacacatgcacatacagccat i chlSab2.chr22 N 0 C 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1160458.000000 s hg38.chrUn_GL000218v1 124768 591 + 161147 cAGCTTtcccagggtaacacaaagagagccaagtggcacctgcacattacgctgtggaagaaaaacc-caagctcaagaaacct-caacttgtattatgggaagttcacttggctgtacccttcccaagagggagaaattatctgcattatactagacag----------taaataaacttttcctttgttccagaaggaggtactggttttctattccaaggctgttttctatacaaacatgcttgaaaa--ctatcatttggaacaagaaagtcagcgtccatacttgcaaaatgtgcggaaatcaaagagacccaaaaactgtttctctacCAATTTCTATTTTTTTAA--AATCACATTTTCCCCATATAATAAGCTTTTAATATGTGATAATATTCTGAAATTGTCTTAGCATTTACCCCCATTTCTGAGTCCAGAAGGATACAATA-----AATTTAATTTAATTTAGTAACACTTCAAATAGTAGTGATTGTAATAGCAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATAATATTA---GGTGACAC----AAATAATGCTAGCCACCATTTCTAAGTGTCATGGTAAGTACAGTGATTAT---------TTTCTTTTTT s panTro4.chr3 77200146 593 + 202329955 cAGCTTTCCCagggtaacacaaagagagccaagcggcacctgcacattacactgtgggagaaaaacc-caagctcaagaaaccc-caacttgtattatgggaagttcacttggctgtacccttccccagagggagaaattatctgcattatactagacag----------taaataaacttttcctttgt-ccagaaggaggtactagttttctattccaaggctgttttccatacaaacatgcttgaaaa--caatcatttggaacaagatagtcagcatccatacttgcaaaatgtgcagaagttaaagagacccaaaaattgtttATCTACCAATTTCTATTTTTTTAA--AATCATATTGTCCCCATATAATATGCTTTCAATATGTGATCATATTCTGAAATTGTCTTAGCATTTACCCCCACTTCTGAGTCCAGAAGGATACAATA-----AATTTAATTTAATTTAGTAACACTTCAAATAGTAGTGATTGTAATAGCAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATAATATTATTAGGTGACAC----AAATAATACTAGTCATCATTTGTAAGTGTCATGGTAAGTACAGTGATTAT---------TTTCTTTTCT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 124731 590 - 139590 cAGCTTTCCCagggtaacacaaagggagccaagtggcacctacacattacacggtgggagaaaaatc-caagctcaagaaaccc-cagcttgtgttatgggaagttcacttggctgtatccttccccagagggagaaattatctgcattatactagacag----------taaataaaattttcctttgttccagaaggaggtactggttttctattccaaggctgttttctatacaaacatgcttgaaaa--caatcatttggaacaagatagtcagcgtccacatttgcaaaatgtgcggaaattaaagagacccaaaaattgtttctctacCAATTTCTATTTTT------AATCATATTTTCCCCATATAATATGCTTTTAATACATGATCATATTCTGAAATTGTCTTAGCATTTACCCCAACTTCTGAGTCCAGAAAGATACAATA-----AATTTAATTTAATTTATTAACACTTCAAATAGTAGTGATTCTAATAGCAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATAATATTATTAGGTGACAC----AAATAATGTTAGTCACCATTTGTAAGTGTCATGGTAAGTATGATGATTAT---------TTTCTTTTTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 122596 609 + 192599291 cAGCTTTCCCGgggtaacatgaagagagccaagcggcttgtgcacattacactgtgggagaaaaacc-caagctcaagaaaccc-caatttgtattatgggaagttcacttggctgtacctttccccagagagagaaattatctacattatactagacag----------caaataagcctttcctttgttccagaaggaggtactggttttctattccaaggctgttttctatacaaacatgcttgaaaa--caatcatttggaacaagatagtcagtgtccatacttgcaaaatgtgcagaaattaaacagacccaaaaattgtttctctacCAATTTCTATTTTTTAAA--AATCATATTTTCCCCATTTAATATGCTTTTAATATGTGATTATATCCTGAAATTGTCTTAGCAATTACCCCCACTTCTGAGTCCAGAAGGATACAATAaatttaatttaatttaatttaGTAACACTTCAAATTGTAGTGATTCTAATAGGAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATATTATTA---GGTGACACATATAAATAATGCTAGTCACCATTTGTAAGTGTCATGGTAAGTACAGTGATTACTTTGTTTTTTTTTTTTTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 145368 605 - 192460366 cAGCTTTCCCagggtaacacgaagagagccaagcggcttgtgcacattacactgtgggagaaaaacc-caagctcaagaaaccc-caatttgtattatgggaagttcacttggctgtacctttccccagagagagaaattatctacattatactagacag----------caaataagcctttcctttgttccagaaggaggtactggttttctattccaaggctgttttctatacaaacatgcttgaaaa--caatcatttggaacaagatagtcagtgtccatacttgcaaaatgtgcagaaattaaacagacccaaaaattgtttctctacCAATTTCTATTTTTTAAA--AATCATATTTTCCCCATTTAATATGCTTTTAATATGTGATTATATCCTGAAATTGTCTTAGCAATTACCCCCACTTCTGAGTCCAGAAGGATACAATAAATTTAATTTAATTTAATTTAGTAACACTTCAAATTGTAGTGATTCTAATAGGAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATATTATTA---GGTGACACATATAAATAATGCTAGTCACCATTTGTAAGTGTCATGGTAAGTACAGTGATTACtttg----ttttttttttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 91726 589 + 187378091 CAGCTTTCCCAGGGCAACACGAAGAGAGCCAAGTGGCATGTGCACATTACACTGTGGGAGAAAAACC-CAAGCTCAAGAAACCC-CAATTTGTATTATGGGAAGTTCACTTGGCTGTACCTTTCCCCAGAGAGAGAAATTATCTACATTATACTAGACAG----------TAAATAAGCCTTTCCTTTGTTCCAGAAGGAGGTACTGGTTTTCTATTCCAAGGCTGTTTTCTATACAAACATGCTTGAAAA--CAATCATTTGGGACAAGAT----AGTGTCCATACTTGCAAAATGTGCAGAAATCAAACAGACCCAAAAATTGTTTCTCTaccaatttcaattttttaaa--aatcatattttcccCATTTAATATGCTTTTAATATGTGATCATATCCTGAAATTGTCTTAGCAATTACCCCCACTTCTGAGTCCAGAAGGATACaataaatttaacttaatttaatttagtaACACTTCAAATTGTAGTGATTCTAATAGCAGAGCTAG----Tttatagcataaagaaaa-----aattttatta---gGTAACACATATAAATAATGCTAGTCACCACTTGTAAGTGTCATGGTAAGTACAGTGATTAC-------------tttttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 39510 599 - 101219884 cAGCTTTCCCagggtaacatgaagagagccaagtggaacgtgcacattacactatgggagaaaaacc-caagctcaagaaaccc-caatttgtattatgggaagttcacttggctgtacctttccccagagaaagaaattatctacattatactagacag----------caaataagcttttcctttgttccagaaggaggtactagttttctattccaaggctgttttctatacaaacatgcttgaaaa--caatcatttggaacaagatagtcagtgtctatacttgcaaaatgtgcagaaattaaacagacccaaaaattgtttctctacCAATTTCTATTTTTAAAA--AATCATATTTTCCCCAATTAATATGCTTTTAATATGTGATCATATCCTGAAATTGTCTTAGCAATTACCCCTACTTCTGAGTCCAGAAGGATACAATACATTTAATTTAATTTAATTTAGTAACACTTCAAATTGTAGTGATTCTAATAGCAGAGCTAG----TTTGTAGCATAAAGAAAAAAT--AATATTATTA---GGTGACACATATAAATAATGCTAGTCACCATTTGTAAGTGTCATGGTAAGTACAGTGATTAC----------TTTCTTTTT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28764483 597 - 39895921 caactttcacagggcaacacaaaggg-gtcaagcgatgcttgcccatggtactgtagaagtacagccacaagtttagggaacctccatcttttattat-gaatgttcatttgccaagacttttccccagagaaagacattctctaaattatactggacagtaaacaagcctaaacaagcttttcctttgctccagaaggagacactaattctatattccaaggctgttttctatacagacattgttgaaaaggtattca-----aacaaggcagccagtg------cttgcaaattgtgcggaaatcagac--acccaAGAGC-----ACCCTCCTAATCCAGTTTATTAAATCAGCTCTTTTTCTACAAAATTATACATCTTTAATATGCTCTCATATTCTAAAATGGTATTAAGAATTACTCTAATTTCTGAGTCTAGGAGGATACTATG-----AATTTAATTTTATTTAGTGCTACTTTAAATACAAATGATAGAAACAACTAAGTTATTATCTTTATATTATGAAAAAAACCCCAAATATTGTGA---GATGACATATAAAAATAATGCCAGTCATCATTCCTAGTTGCAGTAGGGTGTGTAGTGTTTAT---------TTTCTGTTTT i canFam3.chr31 N 0 I 441 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=88789.000000 s hg38.chrUn_GL000218v1 125359 78 + 161147 TCTGACTCTTTTTTATTGTATTTTTTAttttttttcccataggttattggggtac-ggtggtatttggttcgggtccat s panTro4.chr3 77200739 71 + 202329955 TCTGACTCTTTTTTATTTTATTTT--Attttattttccataggttattggggtac-ggtggtatttggttt-----cat i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125321 71 - 139590 TCTGACTCTTTTTTATTTTATTTTTTAtttttttt--cataggttattctggtac-ggtggtatttggttc-----cat i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123205 69 + 192599291 TTGGACTCTTTTTTATTTTAtttt--attttttc---cataggttattggggtacaggtggtatttggtta-----cat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 145973 69 - 192460366 ttggactcttttttattttAtttt--attttttc---cataggttattggggtacaggtggtatttggtta-----cat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92315 64 + 187378091 tggtactctt-----ttttatttt--attttttc---cataggttattggggtacaggtggtatttggtta-----cat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40109 67 - 101219884 TTGGACTCTT--TTATTTTAtttt--attttttc---cataggttattgggatacaggtggtgtttggtta-----cat i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28765080 441 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=3199.000000 s hg38.chrUn_GL000218v1 125437 4 + 161147 gaat--- s panTro4.chr3 77200810 4 + 202329955 gagt--- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125392 4 - 139590 gagt--- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123274 4 + 192599291 gaat--- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146042 4 - 192460366 gaat--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92379 4 + 187378091 gaat--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40176 4 - 101219884 gaat--- i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_62468.1-4574 3415 4 + 4574 ---TCAC i tupBel1.scaffold_62468.1-4574 N 0 N 0 e canFam3.chr31 28765080 441 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=289078.000000 s hg38.chrUn_GL000218v1 125441 172 + 161147 aacttctttactggttatttgtgagatttgggtgcacctatcacccgaacagtgtacactgcaccttatttgttatcttttatccctcgccccccacccTATTAAATAATAGACAAAAAATAATGGGTTTAGAATAAATGAGTTCAAATGAATTGTCAAACGTATGTGGGAA s panTro4.chr3 77200814 172 + 202329955 aagttctttagtggtgatttgtgagattttggtgcatccaccaccctagcagtgtacactgcaccctatttgtaatcttttatccctcacccccctcccTATTAAATAATAGACAAAAAATAATGGGTTTAGAATAAATGAGTTCAAATAAATTGTCAAACCTATGTGGGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125396 172 - 139590 aagttctttagtggtgatttgtgagattttggtgcgcccatcacccaagcagtgtacactgcaccctatttataatcttttatccctcgctcccctcccTATTAAATAATAGACAAAAAATAATGGGTTTAGAATAAATCAATTCAAATAAATTTTCAAACGTATGTGGGAA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123278 171 + 192599291 aagttacttagtggtgatttgtgaga-tttggtgcacccatcacccaagcagtatacactgcaccctatttgtagtcttttatcccttgccattctcccTATAAAATAATAGACAAAAAATAATGGGTTTAGAATAAATGAGCTCAAGTAAATTGTCAAATGTATGTGGGAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146046 172 - 192460366 aagttacttagtggtgatttgtgagattttggtgcacccatcacccaagcagtatacactgcaccctatttgtagtcttttatcccttgcccctctcccTATAAAATAATAGACAAAAAATAATGGGTTTAGAATAAATGAGCTCAAGTAAATTGTCAAATGTATGTGGGAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92383 172 + 187378091 aaattacttagtggtgatttgtgagattttggtgcacccatcacccaagcagtatacactgcaccctatttgtagtcttttattccttgcCCCTCTCCCTataaaataatagacaaataatAATGGGTTTAGAAAAAATGAGTTCAAGTAAATTGTCAAATGTATGTGGGAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40180 172 - 101219884 aagttacttagtggtgatctgtgagattttggtgcacccatcacccaagcagtgtacactgcaccctatttgtagtcttttatcccttgcccccctcccTATAAAATAATAGACAAAAAATAATGGGTTTAGAATAAATGAGTTCAAGTAAATTGTCAAATGTATGTGGGAT i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28765080 441 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=314795.000000 s hg38.chrUn_GL000218v1 125613 173 + 161147 AAGTGGAATCAGTTTGTGAGAAAAAGGAAAAAAAACTCAACAGAAATGCTGATAAAGCATCATCCCTTCATGGCTAGAGCTGCCAGGACACTAGAACACCAAAATCAGCTAGGGAAATTTTGTAGAAGTCCCAGATGTACT----------------------------------------------------------------------------------------------------AGATGTTCTG---TGAATACACAGAGATATAATTA s panTro4.chr3 77200986 170 + 202329955 AAGTGGAATCGGTTTCTGAGAAAAAGCAAAAA---CTCAACAGAAATGCTGATAAAGCATCATCCCTTCACGGCTAGAGCTGCCAGGACACCAGAACACCAAAATCAGCTAGGGAAATTTTGTAGAAGTCCTACATGTACT----------------------------------------------------------------------------------------------------AATTGTTCTG---TGAATACACAGAGATATAATTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125568 171 - 139590 AAGTGGAATCAGTTTCTGAGAAAACGCAAAAA--ACTCAACAGAAATGCTCATAAAGCACCATCCCTTCATGGCTAGAGCTGCCAGGACACCAGAACACCAAAATCAACTAGAGAAATTTTGTAGAAGTCCTAGATGTACT----------------------------------------------------------------------------------------------------AATTGTTCTC---TGAATACACAGAGATATAATTA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123449 171 + 192599291 AAGTGGAATCAGTTTCTGAGAAAAAGCAAAAA--ACTCAACAGAAATGCTCATAAAGCATCATCCCTTCATGGCTGGAGCTGCCAGGACACCAGAACACCAGGGTCAGCCAGGGACATTTTGTAGAAGTCCTAGATGTACT----------------------------------------------------------------------------------------------------AACTGCTCTG---TGAATACACAGAGATATAATTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146218 171 - 192460366 AAGTGGAATCAGTTTCTGAGAAAAAGCAAAAA--ACTCAACAGAAATGCTCATAAAGCATCATCCCTTCATGGCTGGAGCTGCCAGGACACCAGAACACCAGGGTCAGCCAGGGACATTTTGTAGAAGTCCTAGATGTACT----------------------------------------------------------------------------------------------------CACTGCTCTG---TGAATACACAGAGATATAATTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92555 263 + 187378091 AAGTGGAATCAGTttctgagaaaaagcaaaaa--actcaACAGAAATGCTCATAAAGCATCATCCCTTCATGGCTGGAGCTGCCAGG--------ACACCAGGGCCAGCCAGGGACATTTTGTAGAAGTCCTAGATGTACTAACTGCTCTGTGAATACACAGGGACATTTTGTAGAAGTCCTAGATGTACCAACTGCTCTGTGAATACACAGGGACATTTTGTAGAAGTCCTAGATGTACCAACTGCTCTG---TGAATACACAGAGATATAATTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40352 170 - 101219884 AAGTGGAATCAGTTTCTAAGAAAAAGCAAAAA--ACTCAACAGAAATGCTCATAAAGCATCATCCCTTCATGGCTGGAGCTGCCAGGACA-CAGAACACCAGGATCAGCTAGGGACATTTTGTAGAAGTCCTAGATGTACT----------------------------------------------------------------------------------------------------AACTGCTCTG---TGAATACACAGAGATATAATTA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28765521 172 - 39895921 AAGTGAAATTGGTTTCTGAGGAAAAA-AAAGA--TCTCAGTAGAAACACCCATGAAGTATCATCCCTTAATGGCAAGAACTTCCTGAACATCAGAACACCTAAAGTAGGTAGACGAACTCTAGAGAAGTGCTGGATGTACC----------------------------------------------------------------------------------------------------AACTGTTATGGTATGAGGA-ACAAAGATAGATTCA i canFam3.chr31 I 441 I 657 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=327609.000000 s hg38.chrUn_GL000218v1 125786 172 + 161147 TAACTGTTACCTGCA-----TGTAGAGTAAAGATGAG-AAGGCATTGGTCAT--------GGTGGCAGCTACCTCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTGTATGTCAGGGCAAAGCTGTCCTAGGAGGCTATTAGGAGTTGGTTATGACATAGAC---ATTGTAAGTCAGATGGTCTca s panTro4.chr3 77201156 171 + 202329955 TAAATGTTACCTGCA-----TGTAGAGTAAAGATGAG-AAGGCATTGGTCAT--------GGTGGCAGCTAC-TCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTATATGTCAGGGTAGAGCTGTCCTTGGAGGCTATTAGGAGCTGGTCATGGCACAGAC---ATTGTAAGTCAGATGGTCTca i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125739 172 - 139590 TAACTGTTACCTGCA-----CGTAGAGTAAAGATGAG-AAGGCATTGGTCAT--------GGTGGCAGCTTCCTCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTATATGTCAGGGCAAAGCTGTCCTCAGAGGCTATTAGGAGCTAGTCATGGCACAGAC---ATTGTAAGACAGATGTTCTca i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123620 169 + 192599291 TAACTG-TACCTGCA-----TGTAAAG--ATGAGAAG-AAGGCATTGGTCAT--------AGTGGCAACTACCTCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTATATGTCAGGGCAGAGGTGCCCTTGGAGGCTATTAGGAGCTGGTCATGGCACAGGC---ATTGTAAGTCAGATGGTCTca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146389 169 - 192460366 TAACTG-TACCTGCA-----TGTAAAG--ATGAGAAG-AAGGCATTGGTCAT--------AGTGGCAACTACCTCAGGAGTTACAAAACAGACGTGGTTCCAGGACAGTATATGTCAGGGCAGAGGTGCCCTTGGAGGCTATTAGGAGCTGGTCATGGCACAGGC---ATTGTAAGTCAGATGGTCTca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92818 169 + 187378091 TAACTG-TACCCGCA-----TGTAAAG--ATGAGAAG-AAGGCATTGGTCAT--------AGTGGCAACTACCTCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTATATGTCAGGGCAGAGGTGTCCTTGGAGGCTATTAGGAGCTGGTCATGGCACGGGC---ATTGTACGTCAGATGGTCTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40522 170 - 101219884 TAACTGTTACCTGCA-----TGTAAAG--ATGAGAAG-GCGGCATTGGTCAT--------AGTGGCAACTACCTCAGGAGTTACAAAGCAGACGTGGTTCCAGGACAGTATATGTCAGCGCAGACGTGTCCTTGGAGGCTATTAGGAGCTGGTCATGGCACAGGC---ATTGTAAGTCAGATGGTCTTa i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28766350 183 - 39895921 TGACTACTACCTTTACATATTGTAAAT--GCGAGAAGCAAGGCATTGGTCATTGGTCATCGGTGTCAGCTACGTTAGAAGTTACAGAGCAGTCATGCTGTGTGGACACTATATGTCAGGGCAAGGTTGTGCTATGATATCATTAGAACCTGGTCAT----CTGGCTTGATTGTAAGTCAGATGGTCTCA i canFam3.chr31 I 657 I 5308 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=82875.000000 s hg38.chrUn_GL000218v1 125958 45 + 161147 ttactttcaatgacaaaaccaaaattacttttgtatcagcctaaT s panTro4.chr3 77201327 45 + 202329955 ttactttcaatgacaaaaccaaaattacttttgcatcagcctaaT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125911 45 - 139590 ttactttcaatgacaaaaccaaaattacttttgcatcagcctaaT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123789 45 + 192599291 tcactttcattgacaaaaccaaaattacttttgcatcagcctaaT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146558 45 - 192460366 tcactttcattgacaaaaccaaaattacttttgcatcagcctaaT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 92987 45 + 187378091 TCACTTTCATTGACAAAACCAAAATTACTTTTACATCAGCCTAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40692 45 - 101219884 ttactttcattgacaaaaccaaaattacttttgcatcagcctaaT i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28766533 5308 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=319852.000000 s hg38.chrUn_GL000218v1 126003 170 + 161147 ACAACGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGACCTCTGATACAGCACAA-TTCCTTCATTCCCTTCTCCAAAAC---------CCCCCTCTTCCAATTCCACTGAAGAGAGAATCTGATGGAAGTGCTGTGTAAGTAGGCTCAGA----------------------------------TATATCTACCA------------------------CTATA---------- s panTro4.chr3 77201372 169 + 202329955 ACAACGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TATGTGGGGACTTCTGATGCAGCACAA-TTCCTTCATCCCCTTCTCCAAAAC---------CCCC-TCTTCCAATTCCACTGAAGAGAAAATCTGATGGAAGTCCTGTGTAAGCAGGCTCAGA----------------------------------TATATCTACCA------------------------CTATA---------- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 125956 169 - 139590 ACAATGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGATTTCTGATGCAGCACAA-TTCCTTCATCCTCTTCTCTAAAAC---------TCCC-TCTTCCAATTCCCCTGAAGGGAAAATCTGATGGAAGTCCTGTGTAAGCAGGCTCAGA----------------------------------TATATCTACCA------------------------CTATA---------- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 123834 168 + 192599291 ACAATGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGGCCTCTGATGCAGCACAA-CTCCTTCATCCCCTTCTCCAAAAC---------CCCC-TCTTCCAATTCCACTGAAGAGAAAATCTGATGGACGTCC--TGTAAGCAGGCTCAGA----------------------------------TATATCTGCTA-----------------------TTTAAA---------- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146603 168 - 192460366 ACAATGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGGCCTCTGATGCAGCACAA-CTCCTTCATCCCCTTCTCCAAAAC---------CCCC-TCTTCCAATTCCACTGAAGAGAAAATCTGATGGACGTCC--TGTAAGCAGGCTCAGA----------------------------------TATATCTGCTA-----------------------TTTAAA---------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93032 168 + 187378091 ACAATGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGGCCTCTGATGCAGCACAA-TTCCTTCATCCCCTTCTCCAAAAC---------CCCC-TCTTCCAATTCCACTGAAGAGAAAATCTGATGGACGTCC--TGTAAGCAGGCTCAGA----------------------------------TATATCTGCTA-----------------------TTTAAA---------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40737 168 - 101219884 ACAATGGCCTGGCAAGAGCACAGAAAAAGTCCCTGTGCTGT-TAGGTGGGGGCCTCTGATGCAGCACAA-TTCCTTCATCCCCGTCTCCAAAAC---------CCCC-TCTTCCAATTCCACTGAAGAGAAAATCTGATGGACGTCC--TGTAAGCAGGCTCAGA----------------------------------TATATCTGCTA-----------------------TTTAAA---------- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28771841 246 - 39895921 ACAACAGCCTGGCAGGAGTGAAAGAAAAACTTATGTGTTGTATAGATGTGGCCTTCTAATGTGGCATAATTTTTTTCATCCTTTCTTCTAAAACATGTTGAGACCCC-CTTTCTAGCTCCATCAAAGCCAAAATCTAGTGGAAATCC--TGAAGGCAGGCTCAAAAGGAGTGAGGGGAAAAGAGAGACAAGGATTACTGTGTATCATCCAGTTAACAATCATATGGGTTTTATTTTAAAAGTCAAAATA i canFam3.chr31 I 5308 C 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=5828.000000 s hg38.chrUn_GL000218v1 126173 2 + 161147 GA s panTro4.chr3 77201541 2 + 202329955 GA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126125 2 - 139590 GA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124002 2 + 192599291 GA i rheMac3.chr2 C 0 I 5 s macFas5.chr2 146771 2 - 192460366 GA i macFas5.chr2 C 0 I 5 s papAnu2.chr2 93200 2 + 187378091 GA i papAnu2.chr2 C 0 I 5 s chlSab2.chr22 40905 2 - 101219884 AA i chlSab2.chr22 C 0 I 5 s tupBel1.scaffold_136731.1-86001 23117 2 - 86001 GA i tupBel1.scaffold_136731.1-86001 N 0 C 0 s canFam3.chr31 28772087 2 - 39895921 GA i canFam3.chr31 C 0 I 102 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=102255.000000 s hg38.chrUn_GL000218v1 126175 37 + 161147 TAGTAGAGGTGATTCATAAATCCAAGCCTATCAAATA s panTro4.chr3 77201543 37 + 202329955 TAGTAGAGGTGATTCACAAATCCAAGCCTATCAAATA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126127 37 - 139590 TAGTAGAGGTGATTCACAAATCCAAGCCTATCAAATA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124009 37 + 192599291 TGGTAGAGGTGATTCACAAATCCAAGCCTACCAAATA i rheMac3.chr2 I 5 C 0 s macFas5.chr2 146778 37 - 192460366 TGGTAGAGGTGATTCACAAATCCAAGGCTACCAAATA i macFas5.chr2 I 5 C 0 s papAnu2.chr2 93207 37 + 187378091 TGGTAGAGGTGATTCACAAATCCAAGCCTACCAAAGA i papAnu2.chr2 I 5 C 0 s chlSab2.chr22 40912 37 - 101219884 TGGTAGAGGTGATTCACAAATCTAAGCCTACCAAATA i chlSab2.chr22 I 5 C 0 s tupBel1.scaffold_136731.1-86001 23119 37 - 86001 TGGTAGAGATGGTTCATAAATCTGTGCCTACCAAATA i tupBel1.scaffold_136731.1-86001 C 0 C 0 s canFam3.chr31 28772191 37 - 39895921 TAGTAGAAGTGGTTTGCAGATCCATGCCTACCAAACA i canFam3.chr31 I 102 I 109 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=20198.000000 s hg38.chrUn_GL000218v1 126212 9 + 161147 CATCATAAA s panTro4.chr3 77201580 9 + 202329955 CATCATAAA i panTro4.chr3 C 0 I 3 s nomLeu3.chr21_GL397661_2_random 126164 9 - 139590 CATCATAAA i nomLeu3.chr21_GL397661_2_random C 0 I 3 s rheMac3.chr2 124046 9 + 192599291 CACCATAAA i rheMac3.chr2 C 0 I 3 s macFas5.chr2 146815 9 - 192460366 CACCATAAA i macFas5.chr2 C 0 I 3 s papAnu2.chr2 93244 9 + 187378091 CACCATAAA i papAnu2.chr2 C 0 I 3 s chlSab2.chr22 40949 9 - 101219884 CATCATAAA i chlSab2.chr22 C 0 I 3 s tupBel1.scaffold_136731.1-86001 23156 9 - 86001 CATCCTAAA i tupBel1.scaffold_136731.1-86001 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=962.000000 s hg38.chrUn_GL000218v1 126221 1 + 161147 G s panTro4.chr3 77201592 1 + 202329955 G i panTro4.chr3 I 3 C 0 s nomLeu3.chr21_GL397661_2_random 126176 1 - 139590 G i nomLeu3.chr21_GL397661_2_random I 3 C 0 s rheMac3.chr2 124058 1 + 192599291 G i rheMac3.chr2 I 3 C 0 s macFas5.chr2 146827 1 - 192460366 G i macFas5.chr2 I 3 C 0 s papAnu2.chr2 93256 1 + 187378091 g i papAnu2.chr2 I 3 C 0 s chlSab2.chr22 40961 1 - 101219884 G i chlSab2.chr22 I 3 C 0 s tarSyr2.KE939166v1 116586 1 + 119440 T i tarSyr2.KE939166v1 N 0 C 0 s tupBel1.scaffold_136731.1-86001 23165 1 - 86001 A i tupBel1.scaffold_136731.1-86001 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=12086.000000 s hg38.chrUn_GL000218v1 126222 6 + 161147 ------------TTACAC s panTro4.chr3 77201593 6 + 202329955 ------------TTACAC i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126177 6 - 139590 ------------TTACAC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124059 6 + 192599291 ------------TTACAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146828 6 - 192460366 ------------TTACAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93257 6 + 187378091 ------------ttacat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40962 6 - 101219884 ------------TTACAT i chlSab2.chr22 C 0 C 0 s tarSyr2.KE939166v1 116587 6 + 119440 ------------TTGTAC i tarSyr2.KE939166v1 C 0 C 0 s micMur1.scaffold_3530 61220 6 - 180192 ------------tcatac i micMur1.scaffold_3530 N 0 N 0 s tupBel1.scaffold_136731.1-86001 23166 18 - 86001 TAAGCCCATAGTCTACAG i tupBel1.scaffold_136731.1-86001 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=-11367.000000 s hg38.chrUn_GL000218v1 126228 6 + 161147 -GTTTA----A s panTro4.chr3 77201599 6 + 202329955 -ATTTA----A i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126183 6 - 139590 -GTTTA----A i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124065 10 + 192599291 -GTTATTATAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146834 9 - 192460366 -GTTATTAT-T i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93263 6 + 187378091 -gttat----t i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40968 9 - 101219884 -GTTATTTA-T i chlSab2.chr22 C 0 C 0 s tarSyr2.KE939166v1 116593 6 + 119440 -CTTCT----C i tarSyr2.KE939166v1 C 0 I 260 s tupBel1.scaffold_136731.1-86001 23184 6 - 86001 GCTCAA----- i tupBel1.scaffold_136731.1-86001 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=6473.000000 s hg38.chrUn_GL000218v1 126234 4 + 161147 TTTT s panTro4.chr3 77201605 4 + 202329955 TTTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126189 4 - 139590 TTTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124075 4 + 192599291 TTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146843 4 - 192460366 ATTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93269 4 + 187378091 tttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40977 4 - 101219884 TTAT i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_136731.1-86001 23190 4 - 86001 CTTT i tupBel1.scaffold_136731.1-86001 C 0 I 17538 e canFam3.chr31 28772228 109 - 39895921 I e tarSyr2.KE939166v1 116599 260 + 119440 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=403811.000000 s hg38.chrUn_GL000218v1 126238 240 + 161147 TTTTT-GAAATTAGGGATCATGAtataaaagttatcagaatcaaaactgtcagtaatctttaaaaagaaaagaaaaaacctggacaaatagattcagagaaggccttgaagagagggttctcgtgcttctaggcctgatac---aaactgtcacaaaataccacaaaatccacaaccttgcacaaaggccatagcaaccttacacaaaatacacttctgtgaggacatctatccagcaaccacc s panTro4.chr3 77201609 243 + 202329955 TTTTTTGAAATTAGGGATCATGAtatgaaagttatcagaatcaaaactgtcactaatgtttaaaaagaaaagaaaaaacctgcacaaatagattcagagaaggcctt-aagagagggttctcatgcttctaggcctgataacaaaaactatcacaaaataccacaaaaacgacaaccttgcacacaggccatagcaaccttacacaaaatatacttctgtgaggacatctatccagcaactgcc i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126193 243 - 139590 TATTT-GAAATTAGGGATCACAAtatgaaagttatcagaatcaaaactgtcactaatgtttaaaaagaaaagaaaaaacctggacaaatagattcagagaaggccttgaagagagggttctcatgcttctaggcctgacagcaaaaactgtcacaaaatgccacaaaaaccacaaccttgcacaaaggctatagccaccttacacaaaatacaattctgtgaggacatctatccagcaaccacc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124079 237 + 192599291 TTTTT-GAAATTAGGGGTCATGAtgtgaaagttatcagaatcaaaactgtcattaatgtttaaaaagaaaagaaaaaacccagacaaaaaaattcagagaaggccttgaagagagggttcttacgcttctaggcctgataacaaaa------acaaaataccacgaaaactacaatcttgcacaaaggccgtagcaaccttacacaaaaaatacttctgtggggacatctatccagcaaccacc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 146847 237 - 192460366 TTTTT-GAAATTAGGGGTCATGAtgtgaaagttatcagaatcaaaactgtcattaatgtttaaaaagaaaagaaaaaacccagacaaaaaaattcagagaaggccttgaagagagggttcttacgcttcttggcctgataacaaaa------acaaaataccacgaaaactacaatcttgcacaaaggccgtagcaaccttacacaaaaaatacttctgtggggacatctatccagcaaccacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93273 237 + 187378091 ttttt-gaaattaggGATCATGATGTGAAAGTTATCAGAATCAAAGCTGTcattaatgtttaaaaagaaaagaaaaaacccagacAAATAAATTCAGAGAAGGCCTTGAAGAGAGGGTTCTTACGCTTCTAGGcctgataacaaaa------acaaaataccacaaaaactacaaccttgcacaaaggccgtagcaaccttacacaaaaaacaCTTCTGTGGGGACATCTATCCAGCAACCACC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 40981 237 - 101219884 TTTTT-TTAATTAGGGATCATGAtgtgaaagttatcagaatcaaaactgtcattaatgtttaaaaagaaaagaaaaaacccagacaaataaattcagagaaggccttgaagagagggttctcacgcttctgggcctgataacaaaa------acaaaataccacaaaaactacaaccttgcacaaaggccatagcaaccttacacaaaaaacacttctgtggggacatctatccagcaaccacc i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e tarSyr2.KE939166v1 116599 260 + 119440 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=3171.000000 s hg38.chrUn_GL000218v1 126478 3 + 161147 tgc-- s panTro4.chr3 77201852 3 + 202329955 tgc-- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126436 3 - 139590 tgc-- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124316 3 + 192599291 tgc-- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 147084 3 - 192460366 tgc-- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93510 3 + 187378091 TGC-- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 41218 3 - 101219884 tgc-- i chlSab2.chr22 C 0 C 0 s tarSyr2.KE939166v1 116859 3 + 119440 --cat i tarSyr2.KE939166v1 I 260 N 0 e canFam3.chr31 28772228 109 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=429783.000000 s hg38.chrUn_GL000218v1 126481 252 + 161147 tcaaacttcaactgacatcgaccttgttgttgatctttatagtcaaagataactataacaaaacaattatagaagcctcttcatttttcctttatttatttttttctactcccccataattccaggttgatcgcttttcttttaaagaccttgtcttcctttacc-atttgaatctacacagtttgctttgtcatgcatattcccattgcagtgtcctcctccctaagatgtgtctttttcctttagagaacc s panTro4.chr3 77201855 252 + 202329955 ccaaccttcaactgacatcgaccttgttgtttatctttatagtcaaagacaactgtatcaaaataattatataagcctcttcatttttcctttatttatttttttctactcccccatacttccaggttgatcgtttttcttttaaagaacttgtcttcctttacc-atttgaatctacatagtttactttgtcatgcatattcccattgaaatgccctcctccctaagatgtgtctttttcctttaaagagcc i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126439 252 - 139590 ccaaccttcaactgacatcgaccttgttgttgatctttatagtcgaagataactatatcaaaacaattatataagcctcttcatttttcctttatttatttttttctgctcccccatgcttccaggttgatcgtttttcttttaaagaccttgtcttcctttacc-atttgaatctacatagtttattttgtcaggcattttcccattgcaatgtcctcctccctaaggtgtgtctttttccatcagagagcc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124319 249 + 192599291 ccaacctacaactgacatcgaccttgttgtcgatctttatagtcaaagataactgtgtcaaaacaattatacaagcctcttcatttttcctttat---ttttttcctactcccccatacttccaggttgatcattcttcttttaaaaaccttgtc-tcctttacctatttgaatctacatagtttactctgtcatgcatattcccattgcaatgccctcctccctaagatatgtctttttcctttaaagagcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 147087 249 - 192460366 ccaacctacaactgacatcgaccttgttgtcgatctttatagtcaaagataactgtgtcaaaacaattatacaagcctcttcatttttcctttat---ttttttcctactcccccatacttccaggttgatcatttttcttttaaaaaccttgtc-tcctttacctatttgaatctacatagtttactctgtcatgcatattcccattgcaatgccctcctccctaagatatgtctttttcctttaaagagcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93513 250 + 187378091 CCAACCTTCAACTGACATCGACCTTGTTGTCGATCTTTATAGTCAAAGATAACTGTGTCAAAACAATTATATAAgcctcttcatttttcctttat---ttttttcctactccCCCATACTTCCAGgttgatcatttttcttttaaaaaccttgTCTTCCTTTACCTATTTGAATCTACATAGTTTACTCTGTCATgcatattcccattgcaatgcccTCCTCACTAAGAtatgtctttttcctttaaagagcC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 41221 250 - 101219884 ccaaccttcaactgacatcgactttgttgttgatctttatagtcaaagataactgtgtcaaaacaattacataagcctcttcatttttcctttat---ttttttcctactgccccatacttccaggttgatcatttttcttttaaaaaccttgtcttcctttacctatttgaatctacatagtttactttgtcatgcgtattcccattgcaatgccctcctccctaagatatgtctttttcgtttaaagagcc i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28772228 109 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=483002.000000 s hg38.chrUn_GL000218v1 126733 251 + 161147 tttctctgtttgttatttag-gtttacaATGAGAAGGCGTGTAAAGTAATTTT-----------ACTGTCTTCCTAGG-AAAAAATCACTGACTTA---TATTTATATTTATTTATTTACATTCCT-----GGGGATGAG-----GAATTAAAGATTTCACAAattttcttattgagaagatccaagttttcatgtgagcaaaactgaatatgtaaattg-atatgtaaattatgctgcagataatatgctcaaatgtttacttgtatttaatttgtt s panTro4.chr3 77202107 265 + 202329955 tttctctgtttgttatttag-gtttacaATGAGAAGGGGTCTAAAGTATTTTTGTAAAATTTTTACTGTCTTTCTAGG-AAAAAATCACTGACTTACAGTATTTATATTGACTTATTTACATTCCT-----GGGGATGAG-----GAATTAAAGATTTCACAGattttcttattgagaagatccaagttttcatgtgagcaaaacccaatatgtaaattg-atatgtaaattatgctgcagataatatagtcaaatgtttacttgtatttaatttgtt i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126691 261 - 139590 tttctctgttt----tctag-gtttacaATGAGAAGGGGTCTAAAACATTTTTGTAAAATTTTTACTGTCTTCCTAGG-AACAAATCACTGACTTACAGTATTGATATTGACTTGTTTACATTTCT-----GGGGATGAG-----GAATTAAAGATTTCACAAATTTTCTTCTTGAGAAGATCCAAGTTTTCACGTGAGCAAAACTGAATATGTAAATTG-ATATGTAAATTATGCTGCAGATAATATAGTCAAATGTTTACTTGTATTTAATTTGTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124568 266 + 192599291 tttctatgcttgttatttag-gtttacaACGAGAAGGGGTCTAAAGTATTTTTGTAAAATTGTTACTGTCTTCCCAGGAAAAAAATCACTGACTTTTACTGTTTACATTGACTTATTTACATTCCT-----GGGGATGAG-----GTATTAAATATTTCACAAATTTTCTTATTGACAAGATCCAAGTTTTCATGTGAGCAAAACTGAATATGCAAATTG-ATATGTAAATTATGCTGCAGATAAAATAGCCAAGTGTTTCCTTGTATTTAATTTGTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 147336 266 - 192460366 tttctatgcttgttatttag-gtttacaACGAGAAGGGGTCTAAAGTATTTTTGTAAAATTGTTACTGTCTTCCCAGGAAAAAAATCACTGACTTTTACTGTTTACATTGACTTATTTACATTCCT-----GGGGATGAG-----GTATTAAATATTTCACAAattttcttattgacaagatccaagttttcatgtgagcaaaactgaatatgcaaattg-atatgtaaattatgctgcagataaaatagccaagtgtttccttgtatttaatttgtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 93763 265 + 187378091 TTTCTATGTTTGTTATTTAG-GTTTACAATGAGAAGGGGTCTaaagtatttttgtaaaattgttATTGTCTTCCTATG-AAAAAATCACTGACTTTTACTATTTACATTGACTTATTTACATTCCT-----GGGGATGAG-----gtattaaatatttcacaaattttcTTACTGACAAGATCCAAGTTTTCATGTGAGCAAAACTGAATATGCAAATTG-ATATGTAAATTATGCTGCAGATAAAATAGTCAAATGTTTCCTTGTATTTAATTTGTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 41471 266 - 101219884 tttctatgtttgttatttag-gtttacaACGAGAAGGGGTCTAAAGTATTTTTGCAAAATTGTTACTGTCTTCCTAGGAAAAAAATCACTGACTTTTACTGTTTACATTGACTTATTTACATTCCT-----GGGGATGAG-----GTATTAAATATTTCACAAattttcttattgacaagatccaagttttcatgtgagcaaaactgaatatgcacattg-atatgtaaattatgctgcagataaaatagtcaaatgtttccttgtatttaatttgtt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28772337 261 - 39895921 ttttttttttttttAAATAGAGATTGTGATAAGAGATCTTCAAAGTCAATTTT-----ATTTTCTCTTTTTTCCTAGG--AAAAATCATTGACTCA---CAACTATATATATCTGCTTACATCTCTGTGTGGGGGAGGAGAGAGTGGGTTAGAAATCTCA---GTTTTCTCATTAAGAAAATTCAGGTTTTTATGTGAGCACAATTGAGTATATAAATTGAATAGGTAAGTTAGGCTGTGAATAAAA--ATAAAAtatctacttataat--atttatt i canFam3.chr31 I 109 I 685 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=2205853.000000 s hg38.chrUn_GL000218v1 126984 1276 + 161147 acacatgaatattgcatatgtaagataatatactaagaaattatcacatttaatgaaatgctttaatcaaattcctgattgaatttttgatatcaatatctttttccttgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattgtctgagttacagaactttttgaatttattatgttgtcacaggaagtttcttattgcttgcttaaaggagtcgctctcaatatgatgcggaatccaaaagcactgaagggcatatatcctgagtttctgttactgaagccaaag--gttgccaatttcttgtagatcctgctagagttaaacttcatttaagtaatcattaaaagctgcatttattccctcacttgaacttttgatttcacactattaggactaatcctctaagtctttgctaagttatgttcctccttttcttgtggcttgactctgatgctctctatatgcaacatcaattgatgtaaa-----gtacattcagggcaatagagtttctttaaatattactttgttattcaaaataatcacaaaagcactcatcgtaggaaaacttgtgaggactcaaatatagggaaatactttttctttctaaggcacaattctctaaagaagttcaccttaatttgaatatacatggGAAAATATCCTTGTTCACTAATAGTCTATATTCACTCTGTTTTCTTCCCTCATAGACCAGCCGGTTCACTATT-----------------------------------------------ATTTTCCAAATGATGTGTGCCTCTCTAGAGTCCAGGCTATCTGCATATCTAATTTTTCCCACA----AATTACTGTTTTGAATTGCACTGAATTCAATTCAAGGGGATGTCATTTA-------TAAACAGTGCAAATATATACTGCACGAGGGATCTTAGAACTCATACACATGGTTTGATCCATAAGCTCATATGAGCGTGCAATGTCAACTTTTTTCATG-TTTTTTTTAAGTCCACTTAAATTCTATTTTAAGCCACCATCTGCCAGTGCTGTTAGGGCAGTTAGCCTTCAATCATTTTAAGATGGTCCCCTCTAAGTACCGTGAT------AGTGATAGAGAtatcaccagtcaggtgtcctaggaagccgactccgagttggagatttgcatgcaaggaggttgaaatg-atattcccaacacctgtgggagagtgaaagcaataggattgggcggagcaggaagtcggctagaatgcaatcactatcatggctgcagtccactctacagggatcttggtgagtttacctaatgacctgg s panTro4.chr3 77202372 1278 + 202329955 acacatgaatattgcatatgtaagataatatactaagaaattatcacatttaatgaaatgctttaatcaaattcctgattgaatttttgatatcaatatctttttcattgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattgtctgagttacagaactttttgaatttattatgttgtcacaggaagtttcctattgcttgtttaaaggagtctctctcaatatgatgcagaatccaaaagcactgaagggcatacagcctgagtttctgttactgaagccaaag--gttgccaatttcttgtagatcctgctacagttaaacttcatttacgtaatcattaaa-gctgcatttattccctcacttgaaattttgatttcacactattaagactaatcctctaagtctttgctaagttatgttcctccttttcttgtagcttgactctgatgatctctatatgcaacatcaattgacataaattaaagtacattcagggcaa--gagtttccttaaatattactttgctattcaaaataatcacaaaagcactcatcgtaggaaaacttgtgaggattcaaatatagggaaatactttttctttgtaaggcataattctgtaaagaaattcaccttaatttgaatatatatggGAAAATATCCTTGTTCACTAATAGTCTATGTTCACTCTGTTTTCTTCCCTCATAGACCAGCCAGTTCACTATT-----------------------------------------------ATTCTCCAAATGATGTGTGCCTCTCTAGAGTCCAGACTATCTGCGTACCTAATTTTTCCCACA----AATTACTGTTTTAAATTGCACTGAATTCAATTTAAGGGGATGTCATTTA-------TAAACAGTGCAAATATATACTGCATGAGGGATCTTAGAAATCATATGCACGGTTTGATCCATAAGCTCATATGAGCGTGCAATGTCAACTTTTTTCATG-TTTTTTTAAAATCCACTTAAATTCTATTTTAAGCCACCATCTGTCTGTGCTGTTAGGGCAGTTAGCCTTAAATCATTTTAAGATGCTCCGTTCTAAGTACTGTGAT------AGTGATAGAGAtgtcaccagtcaggagtcctaggaagctgactccgagatggagatttgcatgcaaggaagttgaaatggatattcccaacacctgtgggagagtgaaagcaataggattgggcagagcagga-gtcggctggaatgcaatcactatcatggccgcagcccactctacagggatcttggtgagtttacctaacgacctca i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 126952 1281 - 139590 ACAGATGAATATTGCATATGTGAGATAATATACTAAGAAattatcacatttaatgaaatgctttaatcaaattcccgattgaatttttgatatcaatatctttttcattgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattgtctgagttacagaactttttgaatttattatgttgtcacaggaagtttcctattgcttgtttaatggagtctctctcaatatgatgcagaat-caaaagcactgaagggcatatatcctgagtttctgttaatgaagccaaag--gttgccaatttcttgaagatcctgctagagttaaacttcatttaagtaatcattaaaagctgcatttattcccaaagttgaaattttgatttcacactattaggactaatcctctaagtctttgctaagtaatgttcct-cttttcttgtagcttgactctgatgatctctatatgcaacatcaattgacataaattaaagtacattcagggcaagagagtttccttaaatattactttgttattcaaaataatcacaaaagcactcgtcgtaggaaaacttgtgaggattcaaatatagggaaatacttttcctttcaatggcataattctgtaaagaaattcaccttaatttgaatatatatggGAAAATATCCCTGTTCACTAATAGTCTATATTCACGCTGTTTTCTTTGCTCATAGACCAGCCAGTTCACTATT-----------------------------------------------ATTCTCCAAATGATGTGTGCCTGTCTAGAGTCCAGGCTATCTGCATACCTAATTTTTCCCACA----AATTACTGTTTTGCATTACACTGAATTCAATTCAAGGGGATGTCATTTA-------TAAACAGTGAAAATATATACTACACGAGGGATCTTAGAAATCATATGCATGGTTTGATCCATAAGCTCATATGAGTGTGCAGTGTCAAATTTTTTCATGCTTTTTTTCAAATCCACTTAAATTCTATTTTAAGCCACCATCTGTCTGTGCTGTTAGGGCAGTTGGCCTTAAATCATTTTAAGATGCACCCCTATAAGTACTGTGAT------AGTGATAGAGAtgtcaccagtcaggtgtcctaggaagccgactcggagatggagatttgcatgcaaggaagttgaaatagatattcccaacacctgtggaagagtgaaagcaataggattgggcagagcaggaactcggctggaatgcaatcactatcatggccgcagcccactctacagggatcttggtgagtttacctaatgacctca i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 124834 1341 + 192599291 CCACGTGAATATTGCATGTGTAAGATAATACACCGAGAAattctcaagtttaatgaaatgctttaatcaaattcctcactgaatttttgatagcggtgcctttctcgttgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattgcctgagctacagaactttttgaatttattatgttgtcacaggaaatttcctgttgcttgtttaaaggattctctctcaatatgatgcagaatccaaaagcactgaagggcatatatgctgagtttctggtactgaagctaaagctgttgccgatttcttggagagcctgccggagttaaacttcatttaagtaatcattaaaagctgcatttattccctcacttgaaattttgatttcacactattaggactaatcctctaagtctttgctaagttaagtttctgcttttcttattgcttgactctgatgatctctatacgcaacatcaattgatgtaaattaaagtatattcagggcaagagagtttccttaaatattactttgttattcatactaatcacaaaagcactcatcatagaaaaacttgtgaggattcaaatataggaaaacactttttctttctaaggtataattctgtaaagaaattcaccttaatttgaatatatatggGAAAATCTCCTTGTTCACTAATATTCTATATTCACTCAGTTTTCTTCCCTCATAGACCAGCCAGCTCACTATTTTTCTCCGAATGATGTGCACCTCTCCAGAGTTCAGGCTATCTGCATAATTCTCCGAATGATGTGCGCCTCTCCAGAGTTCAGGCTATCTGCATACCTAATTTTTCCCACAGATTAATTACTGTTCTGAATTGCAATGAATTCAATTCAAGGTGATGTCATTTATAAAGAGTAAAGAGTGCAAATATATACTGAAAAGGGGATCTTAGAAATCACATACATGGTtcgatccataagctcatgtgagcatgcaatgtcaacttttttcatg--tctttttaaatccacttaaattctattttaagccaccatctgtctgtgctgttagggcagtcagcctcaaatcattttaagatgctcccccctgagtattgcgat------agtgacagagatgtcaccagtcatgtgtcctaggaagccagctccgagatggagattcgcatgcagggaagttgaaatggatattcccaacacctgtggaagagtgccagcaataggattgggcagagcaggaagtgggctggaaggcaatcactatcatggccacagcccgctcttcagggaccctgatgagtttacctaatgacctca i rheMac3.chr2 C 0 C 0 s macFas5.chr2 147602 1287 - 192460366 ccacgtgaatattgcatgtgtaagataatacaccaagaaattctcaagtttaatgaaatgctttaatcaaattcctcactgaatttttgatagcggtgcctttctcgttgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattgcctgagctacagaactttttgaatttattatgttgtcacaggaaatttCCTGTTGCTTGTTTAAAGGATTCTCTCTCAATATGATGCAGAATCCAAAAGCACTGAAGGGCATATATGCTGAGTTTCTGGTACTGAAGCTAAAGCTGTTGCCGATTTCTTGGAGAGCCTGCCGGAGTTAAACTTCATTTaagtaatcattaaaagctgcatttattccctcacttgaaattttgatttcacactattaggactaatcctctaagtctttgctaagttaagtttctgcttttcttattgcttgactctgatgatctctatacgcaacatcaattgatgtaaattaaagtatattcagggcaagagagtttccttaaatattactttgttattcatactaatcacaaaagcactcatcatagaaaaacttgtgaggattcaaatataggaaaacactttttctttctaaggtataattctgtaaagaaattcaccttaatttgaatatatatggGAAAATCTCCTTGTTCACTAATATTCTATATTCACTCAGTTTTCTTCCCTCATAGACCAGCCAGCTCACTATT-----------------------------------------------ATTCTCCGAATGATGTGCGCCTCTCCAGAGTTCAGGCTATCTGCATACCTAATTTTTCCCACAGATTAATTACTGTTCTGAATTGCAATGAATTCAATTCAAGGTGATGTCATTTA-------TAAAGAGTGCAAATATATACTGCACGAGGGATCTTAGAAATCACATACATGGTtcgatccataagctcatgtgagcatgcaatgtcaacttttttcatg--tttttttaaatccacttaaattctattttaagccaccatctgtctgtgctgttagggcagtcagcctcaaatcattttaagatgctccccccTGAGTATTGCGAT------AGTGACAGAGAtgtcaccagtcatgtgtcctaggaagccagctccgagatggagattcgcatgcaaggaagttgaaatggatattcccaacacctgtggaagagtgccagcaataggattgggcagagcaggaagtgggctggaaggcaatcactatcatggccacagcccgctcttcagggaccctgatgagtttacctaatgacctca i macFas5.chr2 C 0 C 0 s papAnu2.chr2 94028 1293 + 187378091 ACACATGAATATTGCATATGTAAGATAATACACTAAGAAATTATCAAATTTAATGAAATGCTTTAATCAAATTCCTCATTGAATTTTTGATATCAGTGtctttctcattgtttaattcatCTTTAGAGTGAACAGGGCTGTCTAGGCCAAAGTCCTCACTTCTATCTAAATTGCCTGAGCTACAGAACTTTTTGAATTTATTATGTTGTCACAGAAAATTTCCTATTGCTTGTTTAAAGGATTCTCTCTCAATATGATGCAGAATCCAAAAGCACTGAAGGGCATATATGCTGAGTTTCTGGTACTGAAGCTAAAGCTGTTGCCAATTTCTTGTAGAGCCTGCCGGAGTTAAACTTCATTTAAGTAATCATTAAAAGCTGCATTTATTCCCTCACTTGAAATTTTGATTTCACACTA-TAGGACTAATCCTCTAAGTCTTTGCTAAGTTaagtttctccttttcttattgCTTGACTCTGATGATCTGTATACGCAACATCAATTGATGTAAATTAAAGTATATTCAGGGCAAGAGAGTTTCCTTAAATACTACTTTGTTATTCATAATAATTACAAAAGCACTCATCATAGAAAAACTTGTGAGGATTCAAATATAGgaaaacactttttctttctaaGGTATAATTCTGTAAAGAAATTCACcttaatttgaatatatatgaGAAAATCTCCTTGTTCACTAATATTCTATATTCACTCTGTTTTCTTCCCTCATAGACCAGCCAGCTCACTATT-----------------------------------------------ATTCTCCGAATGATGTGTGCCTCTCCAGAATTCAGGCTATCTGCATACCTAATTTTTCCCACAGATTAATTACTCTTCTGAATTGCACTGAATTCAATTCAAGGTGATGTCATTTATAAAGAGTAAAGAGTGCAAATACATACTGCACGAGGGATCTTAGAAATCATATACATGGTTTGATCCATAAGCTCATGTGAGCATGCAATGTcaacttttttcatg--tttttttaaatccacttaaattctattttaagcCACCATCTGTCTGTGCTGTTAGGGCAGTTAGCCTCAAATCATTTTAAGATGCTCCCCCCTGAGTATTGTGAT------AGTGACAGAGATGTCACCAGTCATGTGTCCTAGGAAGCCGGctctgagatggagatttgcaTGCAAGGAAGTTGAAATGGATATTCCCAACACCTGTGGAAGAGTGACGGCAATAGGATTGGGCAGAGCAGGAAGTGGGCTGGAAGGCAATCACTATCATGGCCGCAGCCTGCTCTTCAGGGACCCCGATGAGTTTACCTAATGACTTCA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 41737 1297 - 101219884 acacatgaatattgcatttgtaagataatacactaagaaattatcaaatttaatgaaatgctttaatcaaattcctcattgaatttttgatatcagtgtctttctcattgtttaatccatctttagagtgaacagggctgtctaggccaaagtcctcacttctatctaaattaccagagctacagaactttttgaatttattatgttgtcacagaaaatttCCTATTGCTTGTTTAAAGGATTCTCTCTCAATATGATGCAGAATCCAAAAGCACTGAAGGGTATATATGCTGAGTTTCTGGTACTGAAGCTAAAGCTGTTGCCAATTTCTTGGAGAGCCTGCTGGAGTTAAACTTCATTTaagtaatcattaaaagctgcatttattccctcacttgaaattttgatttcacactcttaggactaatcctctaagtctttgctaagttaagtttctccttttcttattgcttgactctgatgatctctatacgcaacatcaattgatataaattaaagtatattcagggcaagagagtttccttaaatattactttgttattcataataatcacaaaagcactcatcatagaaaaacttgtgaggattcaaatatagggaaacactttttctttctaaggtataattctgtaaagaaattcaccttaatttgaatgtatatggGAAAATTTCCTTGTTCACTAA---TCTATATTCACTCTGTTTTCTTCCCTCATAGACCAGCCAGCTCACTATT-----------------------------------------------ATTCTCCAAATGATGTGCGCCCCTCCAGAGTTCAGGCTATCTGCACACCTAATTTTTCCCACAGATTAATTACTGCTCTGAATTGCACTGAATTCAATTCAAGGTGATGTCATTTATAAAGAGTAAAGAGTGCAAATATATACTGCACGAGGGATCTTAGAAATCACATACATGGTtcgatccataagctcatgtgagcatgcaatgtcaacttttttcatg--tttttttaaatccacttaaattctattttaagccaccatctgtctgtgctgttagggcagttagcctcgaatcattttaagatgctccccccTGAGTATTGTGATAGTGACAGTGACAGAGAtgtcaccagtcatgtgtcctaggaagccggctccgagatggagatttgcatgcaaggaagttgcaatggatattcccaacacctgtggaagagtgacagcaataggattgggcagagcaggaagtgggcgggaaggcaatcactatcatggccgcagcccgctcttcagggaccctgatgagtttacctaatgacctca i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28772598 685 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=136885.000000 s hg38.chrUn_GL000218v1 128260 75 + 161147 aattggagcaagaaaacaaggccattatatttctgtaccaagcagttctcggatgtgggatgccttgagaaggga s panTro4.chr3 77203650 75 + 202329955 aattggagcacgcaagccaggccattatatttctgtaccaagcagttctcggatgtgggatgccttgagaaggca i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 128233 75 - 139590 aattgaagcaagcaagccaggccattatatttctgtaccaagcagttctcaagtgtcggatgtcttgagaaggga i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 126175 75 + 192599291 aattggagcaaggaagccaagccattatatttctgtaccaagcagtcctcggatgtgggatgccctgagaaggga i rheMac3.chr2 C 0 C 0 s macFas5.chr2 148889 75 - 192460366 aattggagcaaggaagccaagccattatatttctgtaccaagcagtcctcggatgtgggatgccctgagaaggga i macFas5.chr2 C 0 C 0 s papAnu2.chr2 95321 75 + 187378091 AATTGGAGCAAGGAAGCCAGGCCATTATATTTCTGTACCAAGCAGTCCTCGGATGTGGGATACTCTGAGAAGGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 43034 75 - 101219884 cattggagcacggaagccaggccattatatttctgtaccaagcagtcctcggatgtggggtgccctgagaaggga i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28773283 71 - 39895921 aattggtgtaaaggagccagaactttatgtaactacattgtccagcctttggatatggt---ctcttagaagtt- i canFam3.chr31 I 685 C 0 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1215.000000 s hg38.chrUn_GL000218v1 128335 1 + 161147 t s panTro4.chr3 77203725 1 + 202329955 c i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 128308 1 - 139590 c i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 126250 1 + 192599291 c i rheMac3.chr2 C 0 C 0 s macFas5.chr2 148964 1 - 192460366 c i macFas5.chr2 C 0 C 0 s papAnu2.chr2 95396 1 + 187378091 C i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 43109 1 - 101219884 c i chlSab2.chr22 C 0 C 0 s saiBol1.JH378168 10915427 1 - 13128814 t i saiBol1.JH378168 N 0 N 0 s canFam3.chr31 28773354 1 - 39895921 t i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=866695.000000 s hg38.chrUn_GL000218v1 128336 473 + 161147 atgaacttggatgaaggaactttactgtgctgtgagtattgttgccaggagtcagctg------tcaacactcccaggagacggg-aaattatg----ctttagtcactgaggcggcatct-agtgtcagaccgcagcCTTGttaaacagagccagactttggaggatggttggtgggtttaaaatttggggcttgacatcttgtccccacaagctgctgctggcctcttccttgtccatttctgtgtggcctgtttaggccccccagcttcctgcttcttctttaccataattggaatgcaaaaatctacacgtaatttggcccatggtcccttctgcttagacatatccttgtagctactttttttt---taaaagatgactatgctttctagaatatttctaagaaattgc---ctaagtcaccactgttcaccaagaggcctt-tgttttttcctcttcttaaccatgggaaaggaatgtaggagggt s panTro4.chr3 77203726 462 + 202329955 atgaacttggatgaaggaactttactgtgctgtgagtattgttgccaggagtcagctg------tcaacactcctaggagacggg-gaattatg----ctttagtcactgaggtggcatct-agtgccagaccacaCCCTTGttaaacagagccagaatgtggaggatggatggtgggtttaacatttggggcttgacgtcttgtccccacaagctgctgctggcctcttccttgtccatttctgtgtggcctgtttaggcccactggcttcctgctgcttctttacca-gtttggaatgcaaaaatctacttgtaatttggcccatggtctcttctgcttagacatatccttgtagctattttttttt-----aaagatgactatgccttctagaatatttctaagaaactgc--------tcaccactgctcaccaagaggcctt-tgctttttcctctt---aaccatgggaaaggaatgtaggggtgt i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 128309 472 - 139590 atgaacttggatgaaggaactttactgtgctgtgagtattgttacctggagtcagctgtcgacatcaacactcccaggagacggg-aaattatg----ctttagtcactgaggcggcacct-agtgccagaccacagcCTTGTTAAACAGAGCCAGAATTTGGAGGATGGATGGTGGGTTTAACATTTGGGGCTTGACATCTTgtccccacaagctgctgctggcctcttccttgtccatttctgtgtggcctgtttaggcccaccagcttcctg---cttctttaccatatttggaatgcaaaaatctactcgtaatttggcccatggtcccttctgcttagacatatccttgtagctatttttttA------AAAGATGACTATGCCTTCTAGAATA-TACTAAGAAACTGC---CTAAGTCACCACTGCTCACCAAGAGGCCTT-TGCTTTTTCCTCTTCTTAACTATGGGAAAGGAATATAGGAGTGT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 126251 457 + 192599291 atgaacttggatgaaggaactttactgtgctgtgagtattattgccaggagtcagctg------tcagcactcccaggagagggc-gaatgatgctttctttagtcactgaggaggcatct-agtgccagatcacggcCTTGTTAAAAAGAGCCAGAATTTGGAGGATGGACGGTGGGTTTAACATTTGGGGCTTGACTTCTTgtcctcacaagctgctgctggcctcttccttgtccacttctgtgaggcctgtttaggcccacgagcttcctgctgcttctttcctgtatttggaatgcaaaaatatactagtaatttctcccatggtcccttctgcttagacatatccttgtagctatttt----------aaagatgacgataccttctagaatatttct---aaactgc---ctaagtcaccactgctcaccaagaggcctt-tgcttctt---------aaccgt-ggaaaggaacgtaggagtgt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 148965 457 - 192460366 atgaacttggatgaaggaactttactgtgctgtgagtattattgccaggagtcagctg------tcagcactcccaggagagggc-gaatgatgctttctttagtcactgaggaggcatct-agtgccagatcacggcCTTGTTAAAAAGAGCCAGAATTTGGAGGATGGACGGTGGGTTTAACATTTGGGGCTTGACTTCTTgtcctcacaagctgctgctggcctcttccttgtccacttctgtgaggcctgtttaggcccacgagcttcctgctgcttctttcctgtatttggaatgcaaaaatatactagtaatttctcccatggtcccttctgcttagacatatccttgtagctattTT----------AAAGATGACGATTCCTTCTAGAATATTTCT---AAACTGC---CTAAGTCACCACTGCTCACCAAGAGGCCTT-TGCTCCTT---------AACCGT-GGAAAGGAACGTAGGAGTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 95397 459 + 187378091 ATGAACTTGGATGAAGGAACTTTACTGTGCTGTGAGTATTATTGCCAGGAGTCAGCTG------TCAGCACTCCCAGGAGACGGC-GAATGATGCTTTCTTTAGTCACTGAGGAGGCATCT-AGTGCCAGACCATGGCCTTGTTAAAAAGAGCCAGAATTTGGAGGATGGACGGTGGGTTTAACATTTGGGGCTTGACTTC-TGTCCTCACAAGCTGCTGCTGGCCTCTTCTTTGTCCATTTCTGTGAGACCTGTTTAGGCCCACCAGCTTCCTGCTGCTTCTTTACCATATTTGGAATGCAAAAATATACTAGTAATTTCTCCCATGGTCCCTTCTGCTTAGATATATCCTTGTAGCTATTTT----------AAAGATGACGATTCCTTCTAGaatatttctaagaaactgc---ctaAGTCACCACTGCTCACCAAGAGGCCTT-TGCTTCTT---------AACCGT-GGAAAGGAATGTAGGAGTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 43110 461 - 101219884 atgaacttggatgaaggaactttactgtgctgtgagtattattgccaggagtcagctg------tcaacactcccaggagacggc-gaatgatgctttctttagtcactgaggaggcatct-agtgccagaccacggcCTTGTTAAAAAGAGCCAGAATTTGGAGGATGGACGGTGGGTTTAACATTTGGGGCTTGACTTCTTgtcctcacaggctgctgctggcctcttccttgtccatttctgtgaggcctgtttaggcccaccagcttcctgcttcttctttaccatatttggaatgcaaaaatatactagtaatttggcccatggtcccttctgcttagacatatccttgtagctattTT----------AAAGATGACGATTCCTTCTAGAATATTTCTAAGAAACTGC---CTAAGTCACCACTGCTCACCAAGAGGCCTT-TGCTTCTT---------AACTGTGGGAAATGAACATAGGAGTGC i chlSab2.chr22 C 0 I 184 s canFam3.chr31 28773355 475 - 39895921 atgaacttggatgagatattcatattcagctgtga-cattactgcaaggagtcagctg------tcagcagccctagaagctgggagaatgctg----ctttagtcctgatgaaggcctctgggtggtagagcacagcCTTGGtaagcagagccagagtgtgggagatggatggtagttaggtccttag----ctgaccacctgtccacacaagccattgttggtctctcctttgtccattcccacatggctcaatgaggcccacaagcccactgttggttctttctcatattgggagcataaaaatcctctcatgagtctcctgatggccgcttctgcctaaac--accattgtagtttttttattttttttctgggacatttagatctcatgggatatttctaggaaattgctttctaggtctccactgctgatcaaggaaccttctgttttcccctccTCTCAACCACAGAGATGGAATGTAGAGGTGT i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=87450.000000 s hg38.chrUn_GL000218v1 128809 50 + 161147 agggagtggatatttt-ctaacctggaaaaa-----------------------------------actcattttaccctatataa s panTro4.chr3 77204188 49 + 202329955 agggagtggatatttt-ctaacctggaaaaa-----------------------------------actcattttaccatacata- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 128781 50 - 139590 AGGGAGTGGATATAtt-ctaacctggaaaaa-----------------------------------attcattttaccctatataa i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 126708 50 + 192599291 agggagtagatatttt-ctaacctggaaaaa-----------------------------------tctcattttaccctgtataa i rheMac3.chr2 C 0 C 0 s macFas5.chr2 149422 50 - 192460366 AGGGAGTAGATATTtt-ctaacctggaaaaa-----------------------------------tctcattttaccctgtataa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 95856 50 + 187378091 AGGGAGTAGATATTTT-CTAACCTGGAAAAA-----------------------------------TCTCATTTTACCCTATATAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 43755 50 - 101219884 AGGGAGTAGATATTtt-ctaacctggaaaaa-----------------------------------tctcattttaccctatataa i chlSab2.chr22 I 184 C 0 s canFam3.chr31 28773830 86 - 39895921 GGAGAGTAGATTTTTTCCTAATCTGGGGAAAATGTGCCatttatttatttatttatttatttatttatttatttatttatttatGA i canFam3.chr31 C 0 I 167 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=503398.000000 s hg38.chrUn_GL000218v1 128859 271 + 161147 ttttttttagca---------------aattccttctttgcacttactccacaatctttccaaattctcccaaatgctcaagcttttaaaaaagaaaagacagaaa-gatagcaggttattagg-tttt--ccaccaaaccttttctttctattcctttacatcagtgagcttagaatatctctgctcctggaactgggaaag-ggacttgggaaa-----agaaagaaaaaaaaagctcccaaagtttaacatcac-aaaacattatagtcacTGCTAT------TTTA-TTAtttatttatt s panTro4.chr3 77204237 267 + 202329955 tttttgttagcg---------------aattccttctttgcacttactccacagtctttccaaattctcccaaatcctcaagcttttaaaaa-caaaagacagaaatgatagcaggttattatt-ttttttccaccaaaccttttctttctattccttcacatcagtgagcttagagtaact--actcctggaactgggaaag-ggacttgggaaa-----agaaa----aaaaaggctctcaaagtttaacatcac-aaaacattatAGTCACTGCTAT------TTTA-TTAtttatttatt i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 128831 279 - 139590 tttttgttagca---------------aattccttctttgcacttactccacaatctttccaaattctcccaaatgctcaagcttttaaaaaacaaaagacagaaatgatagcaggttattatt-tttt--ccacccaaccttttctttctattcctttacatcaatgagcttagaataacgctgctcctggaactgggaaag-ggacttgggaaa-----agaaagaaaaaaaaagctctcaaagtttaacatcac-aaaacattatAGTCACTGCTAttatttatttatttatttatttatt i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 126758 269 + 192599291 tttttcttagca---------------aattccttctttgcacttattccacaatctttccaaattctcccaaatgctcaagcttttaaaaaacaaaagacagaaataatagcaggttgttatt-tttt--ccactaaatcttttctttctattcctttacatcaatgagcttagaataactctgctcctggaattgggaaag-ggacttgggaaa-----agaaagaa-aaaaaaactctcaaagtttaacatcac-aaaacattacagtcacTGT---------tttatttatttatttatt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 149472 269 - 192460366 tttttcttagca---------------aattccttctttgcacttattccacaatctttccaaattctcccaaatgctcaagcttttaaaaaacaaaagacagaaataatagcaggttgttatt-tttt--ccactaaatcttttctttctattcctttacatcaatgagcttagaataactctgctcctggaattgggaaag-ggacttgggaaa-----agaaagaa-aaaaaaactctcaaagtttaacatcac-aaaacattacagtcacTGT---------tttatttatttatttatt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 95906 275 + 187378091 TTTTTCTTAGCA---------------AATTCCTTCTTTGCACTTATTCCACAATCTTTCCAAATTCTCCCAAATGctcaagcttttaaaaaacaaaagacagaaataatagCAGGTTGTTATT-TTTT--CCATGAAATCTTTTCCTTCTATTCGTTTACATCAAGGAGCTTAGAATAACTCTGCTcctggaattggaaaag-ggacttgggaaa-----agaaagaa-aaaaaaactctcaaagtTTAACATCAC-AAAACATTACAgtcactgttat---ttatttatttatttatttatt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 43805 271 - 101219884 tttttcttagca---------------aattccttctttgcacttattccacaatctttccaaattctcccaaatgctcaagcttttaaaaaacaaaagacagaaataatagcaggttattatt-tttt--ccacgaaatcttttctttctattcctttacatcaatgagcttagaataactctgctcctggaattgggaaag-ggacttgggaaa-----agaaagaa-agaaaaaatctcaaagtttaacatcac-aaaacattacagtcacTGt-------tatttatttatttatttatt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28774083 291 - 39895921 ctcttttcagtgtttctccttcatcataatactttttttccaacagttccatgattcttttaaattctccctaagccttaagtttttagaagtcaaaagtcagaaaaaatcataggttactattccttt--cCATGAAATGTTTTCTTTTCATTCCTCAAAATCAGTGAACCC-GAATCACTTTGCTCCTGCAACTGGACAAGAAGACCTAGAAAAATACTAGGGGGTG-GGGAAAGCCCCAGAA--TTAACATCATAAAAACACCGTAATCACTATATT------TGTA-GTATTCAGTGATA i canFam3.chr31 I 167 I 334 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=16914.000000 s hg38.chrUn_GL000218v1 129130 10 + 161147 tatttattta s panTro4.chr3 77204504 10 + 202329955 tgtttgtttg i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 129110 10 - 139590 tatttattta i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 127027 10 + 192599291 tatttattta i rheMac3.chr2 C 0 I 228 s macFas5.chr2 149741 10 - 192460366 tatttattta i macFas5.chr2 C 0 I 12 s papAnu2.chr2 96181 10 + 187378091 tatttattta i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 44076 10 - 101219884 tatttattta i chlSab2.chr22 C 0 I 16 e canFam3.chr31 28774374 334 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=280683.000000 s hg38.chrUn_GL000218v1 129140 232 + 161147 ctt----ttgagctggagtcttgttctgccaccaggctggagtgcagtggtgcgatctctgctcactgcaacctccgtgtcctgggttcaagtgattctcctgcctcagcctactgagtagctgggactacaggtgtgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccgtgttagccaggatgatctcgatctcctgaatctgtgatccgccca s panTro4.chr3 77204514 236 + 202329955 tttgtttttgagatggtgtcctgttctgccaccaggctggagtgcagtggtgccatctcggctcactgtaacctccgcatcttgggttcaagcgattctcctgcctcaccctcctgagtagctgggactacaggcctgtgccaccacacccagctaatttttgtatttttagtagagatggggattcaccgtgttagccaggatgatctctatctcctgaccttgtgatccgcccg i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 129120 236 - 139590 tttatttatgagatgcagtcttattctgccaccaggctggagtgcagtggtgcaatctcggctcactgtaacctctgcatcttgggttcaagcaattctccagtctcagcctcctgagtagctgggactacaagcgtgtgccaccacacccagctaatttttgtatttttagtagagatggggtttcaccgtgttagccaggatgatcttggtctcccgaccttgtgatccgcccg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr2 149763 232 - 192460366 ----tttatgaaatggagtcttgttctgccgccaggctggagtgcagtggtgggatctcggctcactgcaacctccgcgtcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggcatgtgccaccacactcagctaatttttgtatttttagtagagatggggttttaccatgtcagccaggatggtcttgatctcctgacctcgtgatccacccg i macFas5.chr2 I 12 C 0 s papAnu2.chr2 96191 232 + 187378091 ----tttatgagatggagtcttgttctgccgccaggctggagtgcagtggtgggatctcggctcactacaacctctgcgtcctgggttcaagcgattctcctgcctcagcctcctgagtagctgggactacaggcatgcgccaccacactcagctaatttttgtatttttagtagagatggggttttaccatgtcagccaggatggtctcgatctcctgacctcatgatccgcccg i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 44102 232 - 101219884 ----tttatgagatggagtcttgttctgccgccaggctggagtgctgtggtgggatctcggctcactgcaacctccgcgtcctgggttcaagcgattctcctgcctcagcctcctgagtagctgagactacaggcatgcaccactacactcagctaatttttgtatttttagtagagatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgggatctgcacg i chlSab2.chr22 I 16 C 0 e canFam3.chr31 28774374 334 - 39895921 I e rheMac3.chr2 127037 228 + 192599291 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=80912.000000 s hg38.chrUn_GL000218v1 129372 46 + 161147 ccttggcctcccaaagtgctgggattacaggcatgagccaccgtgA s panTro4.chr3 77204750 46 + 202329955 cctcggactcccaaagtgctgggattacaggcgtgagccactgcgc i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 129356 46 - 139590 cctaggcatcccaaagtgctgggattacaggcgtgagccaccgcgc i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 127265 46 + 192599291 ccttggcctcccaaagtgctgggattacaggcctgagccaccgcgc i rheMac3.chr2 I 228 C 0 s macFas5.chr2 149995 46 - 192460366 ccttggcctcccaaagtgctgggattacaggcctgagccaccgcgc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 96423 46 + 187378091 cctcggcctcccaaagtgctgggattacaggcgtgagccaccatgc i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 44334 46 - 101219884 cctcggcctcccaaagtgctgggattacaggcctgagccaccacgc i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28774374 334 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=2623539.000000 s hg38.chrUn_GL000218v1 129418 1354 + 161147 GTGACCCTGCTTTGTAAGT-TTTACATCATATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACATACACTATTTATAGTTCAATTAGAGATGTTCACTGATAAAACTGATTCTTCCATCTGAGGGTGGTATTTGTAGTTACAGTAATGTAGATCACAATCTAAGTTATGTTCTATAAACTGTGTCACTGACATCTCAATCTACAGCTAACTTTGA-TTTTTTAAAAGCAGAGGAGTGGGTTGTATAGGTTTAGAAATACATCCATCAAGCTAGTTA---AGTGAGATGGATTCAAGCCTTCAACTCACTGGAATATTTACCAAATT--GACTATTCATTAGCTAAA-GGAGCCATATAAACAAGGTACTTTTTA-----AAATTCAAAATTATG-TAAGGTTTTATTTCCTTTTTATGTTGTTATGAATTGGATTGTA--GAGGTTATAAGGTAAAATAAGATTACTTTTACAGTAAAACATACAACACATTGTCGCAAGAGGGCAGCCTTTGAACACGAATTGCTTCTC-------AGGCATTCCTTGAAATTTTGAGG--GTTACTTTAATTAACACAACAAAATAATAAAACACTACAGAGGATCTAAGAAGATACTTTGACTTATGCATATTGTTACTTTTTTATTACTGCTAGTGGAAGATGT----AATCGACAAGAAAGGTAAGGGCTGAATTTGTTTTATGTAAAAAGACAAATTTCTTTGGGTTTTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGAGTGTATCAAAGTTCTCACAATGGCACATGTAAATCCACCTCTTGTCTACCCAAAACTCTAACCAAGCAAAGGCAAGTTGGAAGAA-TCAGACAAATGTAAGTCCCTAGGATACA----TAAATGCCAC---GGGATTTTATGTTTTTAACTTTCAACCACCTAAGTTTCACTAAGAGACATGTTAT--TTGGAGAGGTTGCTAAAGTG-TATTTGTATGATGTCTCTGTTTACGGTTGGTCTGGACCTCTTTCTGTCCAGTGGTTGCCCTCAACTGATGAGAGTTACCTCTCTAAAGATCATGCTTACGTCTCTGGAGCAGACCACAGCACTATCAATGTCTGAC---------GTCCACCTTTTTCCAATTAATATTTCTGTACTTACTGAATTGGAAAACATACAGGTGTTTTTTGCCTGGTCACTTGTGGTTTTACAACACTCCCCCCACTTCCCCACCACTGccccaggtgattttgatgccagccaaagtgtgagaactactgGCAGCTGCTGGCAGACAGCAGCAAAGGCCCAAATCCTCTGTGTGATTTCAAGACCCGTATCTGG-TTTTCAGCCATATTTCCTTCTCCTTCTCACAGCTGAGTCCACTCCT------ s panTro4.chr3 77204796 1342 + 202329955 gcggccTTCCTTTGTAATT-TTTACATCATATATCCCCTGTGTTAGACCAAAAGCTTGTAAAAGACAGAAGACATACACCATTTATAGTTCAATTAGAGATGTTTACTGATAAAACTGATTCTTCGATCTGAGGATGGCATTTGTAGTTACAGTAATGTAGATGACAATCTAAGTTATGTTCAATAAACTGTGTCACTGATATCTCAATCTACAGCTAACTTTAA-TTTTTGAAAAGCAGAGGAGTGGGTTGTATAGGTTTAGAAATACATCCATTAAGCTAGTTA---AGTGATGTAGATTCAAACCTGCAACTCACTGGAATATTTACCAAATT--AACTATTCATTATCTAAA-GGAGCCATATAAACAAGGTACTTTTTA-----AAATTCAAAATTATG-TAAGGTTTTATTTCCTTTTTATACTGTTATGAATTGGATTGTA--GAGGTTATAAGGTAAAAT-----TACTTTTACGGTAAAACATACAACACATTGTCACAAGAGGGCAGCCTTTGAACATGAATTGCTTCTC-------AGGCATTCCTTGAAATTTTGAGACAGTTACTTTAATTCACACAACTAACTAATAAAACA-----GAGGATCTAAGAAGATACTTTGACTTATGCATATTGTTACTTTTTTATTACTGCTAGTGGAAGATGT----AATCTATAAGGAAGGCAAGGGCTGAATTTGTTTTATGTAAAAAGACAAATTTCTTTGGGTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCGATGTCTAAA-TGAGTGTATCAAATTTCTCACACTAGCACATGTAAATCCACCTCTTATCTACCCAAAATTCTAACCAAGCAAAGGCAAGTTGGAAGAA-CCAGACAAATGTAAGTCCCTAGGATGCA----TAAATGCCAC---TGGATTTTATGTTTTTAATTTTCAACCTCCCAGGTTTCACTAAGAGACATGCTAT--TTGGAGAGGCTGCTCAAGTG-TAATTGTATGATGTCTCTGTGTACGGTTGGTCTGGACCTCTCTCTGTCCAATGGTTGCCCTCAACTGATTAGAGCCACCTCTCTAAAGATCACGCTTATGTCCCTGGAGCAGTCCACAGCACTATCAATGTGTGAC---------CTCCACCTTGTTCCAATTAAGATTTCTGTACTTACTGAATTGGAAAACATACAGGTGTTTTTTGCCTGGTCACTTGTGGTTTTACAACACTCCCTC-GCTTCCCCACCACTGccccaggtgattttgatgccagccaaaatgtgagaactactgGCAGCTGCTGGCAGACAGCAACAAAGGCCCAAAACCTCTGTGTGATTTCAAGACCCGTATCTTG-TTTTCAGCTGTATTTCCTTCT---TCTCACAGCTGAGCCCCCTCCT------ i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 129402 1354 - 139590 GTCGCCTTGCTTTGTAATT-TTTACGTCATATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACATACACCATTTATAGTTCAATTAGAGATGTTTACTGATAAAACTGATTCTTCAATCTGAGGGTGGCATTTGTAGTTACAGTAATGTAGATGACAATCTAAGTTATGCTCTATAAACGATGTCACTGACATCTCAATCTACAGCTAACTTTAA-TTTTTTAAAAACAGAGGAATGGGTTGTATAGGTTTAGAAATATATCCATCAAGCTAGTTA---AGTGAGATAGATTCAAACCTTCAACTCACTGGAATATTTAACAAATT--GACGATTCATTATCTAAA-GGAGCCATATAAACAAGGTACTTTTTA-----AAATTCAAAATTATG-TAAGGTTTTATTTCCTTTTTATGCTGTTATGAATTGCATTGTA--GAGGTTATAAGGTGAAATAAGATTCCTTTTACAGTAAAACATACAACACATTGTCACAAGAGGGCAGCCTTTGAACATGAATTGCTTCTC-------AGGCATTCCTTGAAATTTTGAGACAGTTACTTT-ATTCGCACAACTAAATAATAAAACACTACAGAGGACCTAAGAAGATACTTTGACTTATGCATATTGTTACTTTTTTATTACTGCTAGTGGAAGATGT----AATCTATAAGGAAGGCAAGGGCTGAATTTGTTTTATGTAAAAAGACAAATTTCTTTGGTTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGCGTGTATCAAAGTTCTCAAAGTAGCACATGTAAATCCACCTCTTATCTACCCAAAATTCTAACCAAGCAAAGGCAAGTTGGAAGAA-CCAGACAAATGTAAGTGCCTAGGATACA----TAAATGCCACCAATGGATTTTATATTTTTAATTTTCAATCTTGCAAGTTTCACTAAAAGACATGTTAT--TTGGAGAGGTTGCTAAAGTG-TAATTGTATGATGTCTCTCTGTACGTTTGGTCTGGACCTCTCTCTGTCCAGGGGTTGCCCTCAAGTGATTAGAGCCACCTCTCTAAAGATCATGCTTATGTCCCTGGAGCAGTCCACAACACTATCAATGTCTGAC---------CTCCACCTTGTTCCAATTAAGATTTCTGTACTTACTGAATTGGAAAACATACAGGTGTTTTTTGCCTGGTCATTTGTGCTTTTACAACACTCCGCCCCCTTCCCCACCACTG-tccaggtgattttgatgccagccaaagtgtgagaactactgGCAGCTGCTGGCAGACAGCAACAAGGGCCCAAATCCTCTGTGTGATTTCCAGACCCGTATCTGG-TTTTCAGCCATATTTCCTTCT---TCTCACAGCTGAGCCCACTCTT------ i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 127311 1354 + 192599291 ttggccTTGCTTTGTAATT-TTTACATCATATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACACACACTATGTATAGTTCAATTAGAGATGTTTACTGATAAAACTGATTCTTCAATCTGAGGGTGGCATTTGTAGTTACAGTAATGTAGATGACAATCTAAGTTATGTTCTATAAACTGTGTCACTGACATCTCAATCTACAGCTAACTTTAA-TTTTTTAAAAGCAGAGGAGTGGGTTGTATAGGTTTAGAAATACATCCATTAAGCTCATTA---AGTGAGGTAAATTCAAACCTTCACCTCATTGGAATATTTACCAAACT--GACTATTCATTATCTAAA-GGAGCCATACCAACGAGGTACTTTTTA-----AAATTCAAAACTATG-TAAGGTTTTATTTCCTTTTTATACTGTTATGAATTGGATTGTA--GAGGTTATAAGGTAAAATAAGATTACTTTTACAGTAAAATATACAACACATTGTCACAAGAGGGCAGCCTTTGAACATGAATTGCTTCAC-------AGGCATTCCTTGAAATTTTGAGACAGTTACTTTAATTCACACAATTAAATAATAAAACACTACTGAGGATCTAAGCAGCTAGTTTGACTTATGCATCTTGTTACTTTTTTATTACTGCTAATGGAAAACAT----AATCTATAAGGAAGGCAAGGGCTGAATTTGTTTTAGGTAAAAAGATAAATTTCTTTGGGTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGAGTGTATCAAAGTTCTCACACTAGCACATGTAAATCCACCTCTTATCTACCCAGAATTCTAACCAAGCAAAGGCAACTTGGAAGAA-CCAGACAAATGTAAGAGCCTAGGATACATACGTAAATGCCAC---TGGATTTTATGTTTTTAATTTTCAACCTCCCAAGTTTCACGAAGAGACATATTAT--TTGGAGACGTTGGTAAAGTG-TAATTGTATGATGTCTCGACGTACGGTTGGTCTGGACCCCTCTCTGTCCAGTGGTTGCCCTCAACTGATTAGAGCCACCTCTCTAAAGATCATGCTTATGTCCATGGAGCAGTCCACAGCACTATAAA----TGAC---------CTCCACCTTGCTCCAACTGAGATTTCTAGACTTACTGAATTGGAAAACACACAGGTGTTTTTTGCCTGGTCACTTGTGGTTTTACAACACTACCCC--TCGCCCCACCACTGccccaggtgattttgatgccagccaaagtgtgagaactactgGCAGCTGCTATCAGAGAGCAACAGAGGCCCCAATCCTCTGTGTGATTTCAAGACCCGTATCTGC-TTTTCAGCCATGTTGCCTTCTCCTTCTCACAGCTGAGCCTACTCCT------ i rheMac3.chr2 C 0 C 0 s macFas5.chr2 150041 1354 - 192460366 ttggccTTGCTTTGTAATT-TTTACATCATATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACACACACTATGTATAGTTCAATTAGAGATGTTTACTGATAAAACTGATTCTTCAATCTGAGGGTGGCATTTGTAGTTACAGTAATGTAGATGACAATCTAAGTTATGTTCTATAAACTGTGTCACTGACATCTCAATCTACAGCTAACTTTAA-TTTTTTAAAAGCAGAGGAGTGGGTTGTATAGGTTTAGAAATACATCCATTAAGCTCATTA---AGTGAGGTAAATTCAAACCTTCACCTCATTGGAATATTTACCAAACT--GACTATTCATTATCTAAA-GGAGCCATACCAACGAGGTACTTTTTA-----AAATTCAAAACTATG-TAAGGTTTTATTTCCTTTTTATACTGTTATGAATTGGATTGTA--GAGGTTATAAGGTAAAATAAGATTACTTTTACAGTAAAATATACAACACATTGTCACAAGAGGGCAGCCTTTGAACATGAATTGCTTCGC-------AGGCATTCCTTGAAATTTTGAGACAGTTACTTTAATTCACACAATTAAATAATAAAACACTACTGAGGATCTAAGCAGCTAGTTTGACTTATGCATCTTGTTACTTTTTTATTACTGCTAATGGAAAACAT----AATCTATAAGGAAGGCAAGGGCTGAATTTGTTTTAGGTAAAAAGATAAATTTCTTTGGGTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGAGTGTATCAAAGTTCTCACACTAGCACATGTAAATCCACCTCTTATCTACCCAGAATTCTAACCAAGCAAAGGCAACTTGGAAGAA-CCAGACAAATGTAAGAGCCTAGGATACATACGTAAATGCCAC---TGGATTTTATGTTTTTAATTTTCAACCTCCCAAGTTTCACGAAGAGACATATTAT--TTGGAGACGTTGGTAAAGTG-TAATTGTATGATGTCTCGACGTACGGTTGGTCTGGACCCCTCTCTGTCCAGTGGTTGCCCTCAACTGATTAGAGCCACCTCTCTAAAGATCATGCTTATGTCCATGGAGCAGTCCACAGCACTATAAA----TGAC---------CTCCACCTTGCTCCAACTGAGATTTCTAGACTTACTGAATTGGAAAACACACAGGTGTTTTTTGCCTGGTCACTTGTGGTTTTACAATACTACCCC--TCGCCCCACCACTGccccaggtgattttgatgccagccaaagtgtgagaactactgGCAGCTGCTATCAGAGAGCAACAGAGGCCCCAATCCTCTGTGTGATTTCAAGACCCGTATCTGC-TTTTCAGCCATGTTGCCTTCTCCTTCTCACAGCTGAGCCTACTCCT------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 96469 1355 + 187378091 atggccttGCTTTGTAATT-TTTACATCATATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACACACACTATGTATAGTTCAATTAGAGATGTTTACTGATAAAACTGATTCTTCAATCTGAGGGTGGCATTTGTAGTTACAGTAATGTAGATGACAATCTAAGTTATGTTCTATAAACTGTGTCACTGACATCTCAATCTACagctaactttaa-ttttttaaaagcagaggaGTGGGTTGTATAGGTTTAGAAATACATCCATTAAGCTCATTA---AGTGAGGTAAATTCAAACCTTCACCTCATTGGAATATTTACCAAACT--GACTATTCATTATCTAAAGGGAGCCATACAAATgaggtacttttta-----aaattcaaaactatg-taaggttttatttcctttttatactgCTATGAATTGGATTGTA--GAGGTTATAAGGTAAAATAAGATTACTTTTACAGTAAAATATACAACACATTGTCACAAGAGGGCAGGCTTTGAACATGAATTGCTTCTC-------AGGCATTCCTTGAAATTTTGAGACAGTTACTTTAATTCACACaactaaataataaaacactACTGAGGATCTAAGCAGCTACTTTGACTTATGCATCTTGTTACTTTTTTATTACTGCTAATGGAAAACAT----AATCTATAAGGAAGGCAAGGGCTGAATTTGTTTTAGgtaaaaagataaatttctttGGGTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGAGTGTATCAAAGTTCTCAGACTAGCACATGTAAATCCACCTCTTATCTACCCAGAATTCTAACCAAGCAAAGGCAACTTGGAAGAA-CCAGACAAATGTAAGAGCCTAGGATACATACGTAAATGCCAc---tggattttatgtttttaattttcaaccTCCCAAGTTTCACTAAGAGACATATTAT--TTGGAGATGTTGGTAAAGTG-TAATTGTATGATGTCTCCACGTACGGTTGGTCTGGACCCCTCTCTGTCCAGTGGTTGCCCTCAACTGATTAGAGCCACCTCTCTAAAGATCATGCTTATGTCCATGGAGCAGTCCACAGCACTATAAA----TGAC---------CTCCACCTTGTTCCAACTGAGATTTCTAGACCTACTGAATTGAAAAACACACAGGTGTTTTTTGCCTGGTCACTTGTGGTTTTACAACACTACCCG--TCGCCCCACCACTGccccaggtgattttgatgccAGCCAAAGTGTGAGAACTACTGGCAGCTGCTATCAGAGAGCAACAAAGGCCCTGATCCTCTGTGTGATTTCAAGACCCGTATCTGG-TTTTCAGCCATGTTGCCTTCTCCTTCTCACAGCTGAGCCTactcct------ i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 44380 1355 - 101219884 ttggccTTGCTTTGTAATT-TTTACATCCTATATCCCCTGTGTTAGACCAAGAGCTTGTAAAAGCCAGAAGACACACACTATATATAGTTCAATGAGAGATGTTTGCTGATAAAAGTGATTCTTCAATCTGAGGGTGGCATTTGTAGTTACAGCAATGCAGATGACAATCTAAGTGATGTTCTATAAACTGTGTCACTGACATCTCAATCTACAGCTAACTTTAA-TTTTTTAAAAGCAGAGGAGTGGGTTGTATAGGTTTAGAAATACATCCTTTAAGCTCATTA---AGTGAGGTAAATTCAAACCTTCACCTCACTGGAATATTTACCACACT--GACTATTCATTATCTAAAGGGAGCCATACAAACGAGGTACTTTTTA-----AAATTCAAAACTATG-TAAGGTTTTATTTCCTTTTTATACTGTTATGAATTGGATTGTA--GAGGTTATAAGGTAAAATAAGATTACTTTTACCGTAAAATATACAACACATTGTCACAAGAGGGCAGCCTTTGAACATGAATTGCTTCTC-------AGGCATTCCTTGAAAGTTTGAGACAGTTACTTTAATTCACACAACTAAATAATAAAACACTACTGAGGATCTAAGCAGCTACTTTGACTTATGCATATTGTTACTTTTTTATTACTGCTAATGGAAAACAT----AATCTATAAGGAAGGTAAGGGCTGAATTTGTTTTAGGTAAAAAGATAAATTTCTTTGGGTTGTAGCTTTCAAACATCAAG---ATAGTAGGTCAATGTCTAAA-TGAGTGTATCAAAGTTCTCACACTAGCACAAGTAAATCCACCTCTTATCTACCCAGAATTCTAACCAAACAAAGGCAACTTGGAAGAA-CCAGACAAATGTAAGAGCCTAGGATACATACCTAAATGCCAC---TGGGTTTTATGTTTTTAATTTTCAACCTCCCAAGTTTCACTAAGAGACATATTAT--TTGGAGATGTTGGTAAAGTG-TAATTGTATGATGTCTCCGCGTACAGTTGGTCTGGACCCCTCTCTGTCCAGTGGTTGCCCTCAACTGATTAGAGCCACCTCTCTAAAGGTCATGCTTATGTCCATGGAACAGTCCACAGCACTATAAA----TGAC---------CTCCACCTTGTTCCAATTGAGATTTCTATACTTACTGAATTGAAAAACACACAGGTGTTCTTTGCCTGGTCACTTGTGGTTTTACAACACTATCCC--TCGCCCCACCACTGcccccggtgattttgatgccagccaaagtgtgagaactactgGCAGCTGCTATCAGAGAGCAACAAAGGCCCTGATCCTCTGTGTGATTTCAAGACCCGTATCTGG-TTTTCAGCCATGTTGCCTTCTCCTTCTCACAGCTGAGCCTACTCCT------ i chlSab2.chr22 C 0 I 217 s canFam3.chr31 28774708 1282 - 39895921 atgatttttctttgcaattgttcacatcacctatctcctgtattagaccaagagcccttcgaagtcagaagttataaactattcatctttCCATTAGTGATGTTTACTGAT-TAACTGACTCTTCAATCTGGGAGTGACATTCACAGTTCCAGTAGTATAGATG--AATT---ATTAAGTTCTATGATGTGCACCACATATACCTCAATTTGTAGTGAAACTTAACTTTTTTAAAAGCAGAGAAGTGGGTTGTATATA-TTGGAAATTTATATATTAAGTTAGTTAAATAGTGAGATGGGTTTACA-TTCCAGCTCCCTGGAACACCTATCTAATCAGAACAATTCATTATCTAAA-ATTGCCATATAAGCAAGATTTTTTTTAAAAAGAAATCACAAATGACATTGAGGTTTTATATCTTTTTAATCCTATCGTGAATTGGATTTTAGTGGGGGTATAAGGTCAAGT--------TTTACTAGTAAAACATACAACACATTGTCACAAGAGGGCAGCCTTTTAACATGAATTGTTCTTCAACCTGTAGGCATTACTTGAAATTTTAAGACAGTTAC-TCAATGTCTTTTACTAAATGATAAAACAATACAAAATATTCAAGCAGATATTTTAATTTATTCATGTTGGT-TTTCTTCATTACTTCTAAC-AAAAATATTTTAAATCTATAAAGAAAACAAGGGCTGAA-TTGTCTTATGTAGAAAGATGGGTTTACATGTATTATACTTTTTAAACATCAAGTCAGTAGTAGGTCAATGGCTGAGTTGAGTGCACCAAAGTTTT-------GTATGACTAAATGTG-------------------TCTAACCAACCAAAGGCAAGCTGGAGGCATCCAGACTGATATTTTAGCCAAGG-CAAA----TTAACATAAT---TGAATTGCTTGTTCTAATTTTTAAACTTTTAATGTCT-----AGAGACACAATGCTGTTGGATATATTGATAAAGAGTTAGTTGCAAAATGTCTTGGTGTATGGCTGAGCTTGG------TCTGT----------AACACAGCGGGATAGAGTCACTTCTACCAAAGTCATGAGATGTTTCCAGGAGTAGCACATGGTGTTATTACTACCTGACCCCACTTTGCCCCACCTTGCTCCAAGTTGGGTTTCTCTTcttactgaactggaaa--------------ctctcccagccagttgtggcttcacag-----gccc-----------------ttcaggtgattctaat-------------TGAGGACTATTAGCA---ACTAGCAGAGAGCAACAAAGGATGAAATCTCCCATATGGTTTAGAGA-CTGCATCTAGTTTTTCAGCCTTAACACCTCTC---ATTCACAGCCTGGCCCTTTACCAGCCCT i canFam3.chr31 I 334 C 0 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=287827.000000 s hg38.chrUn_GL000218v1 130772 145 + 161147 ----CCTCCCT------------------CACCACCTGTAGGCTATGCTTTCCAGCCTGTGTCCAGGATTAGTCCTGATGTAAGGCACGTGGGGTTTAAGGAGCTCTCTCTTC--AGTCTTATTTCCACACCATCTCTGACAGAT-----ATATTCCAGTTGTAATCATGGGGC s panTro4.chr3 77206138 145 + 202329955 ----CCTCCCT------------------CACCACCTGTAGGCTATGCTTTCCAGCCTGTGTCCAGGATTAGTCCTGGGGTAAGGCACGTGGGGTTTAAGGCGCTCTCTCTTC--AGTCTTATTTCTGCACCATCTCTGACAGAT-----ATATTCTAGTTGTAATCATGGGGC i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 130756 145 - 139590 ----CCTCTCT------------------CACCACCTGTAGGCTATGCTTTCCAGCCTGTGTCCAGGATTAGTCCTGACGTAAGACACGTGGGGTTTAAGCAGCTCTCTCTTC--AGTCTTATTTCCGCACCATCTCTGACAGAT-----GTATTCTAGTTGTAATCATGGGGC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 128665 145 + 192599291 ----CCTCCCT------------------CACCACCTGTGGGCTATGCTTTGCTGTCTGTGTCCAGGATTATTCCTGACGTAAGGCACGTGGGGTTTAAGGAGCTCTCTCTTC--AGTCTTATTTCTGCACCATCTCTGACAGAT-----GTGTTCTAGTTGTAATCATGGGGC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 151395 145 - 192460366 ----CCTCCCT------------------CACCACCTGTGGGCTATGCTTTGCTGTCTGTGTCCAGGATTATTCCTGACGTAAGGCACGTGGGGTTTAAGGAGCTCTCTCTTC--AGTCTTATTTCTGCACCATCTCTGACAGAT-----GTGTTCTAGTTGTAATCATGGGGC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 97824 145 + 187378091 ----cctccct------------------caccacCTGTAGGCTATGCTTTGCTGTCTGTGTCCAGGATTATTCCTGACGTAAGGCACGTGGGGTTTAAGGAGCTCTCTCTTC--AGTCTTATTTCTGCACCATCTCTGACAGAT-----GTATTCTAGTTGTAATCATGGGGC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 45952 145 - 101219884 ----CCTCCCT------------------CACCACCTGTAGGCGATGCTTTGCTGTCTGTGTCCAGGATTATTCCTGACATAAGGCACGTGGGGTTTCAGGCGCTCTCTCTTC--AGTCTTATTTCTGCACCGTCTCTGACAGAT-----GTATTCTAGTTGTAATCATGGGGC i chlSab2.chr22 I 217 C 0 s canFam3.chr31 28775990 167 - 39895921 CCCCTCTCCCTTTCCTGCTCCTAACACACCAATATCCATAGGCTACACT-------ATGTGTCTAGGGCTAATCCTGACCTATGGCAGAAGGGATTGAAAGACCTCATTTTTTGAAGTTGTATTCATGCATCACCTCTGATAGTTGTAGAGTATTCCTGTAATAATTATGAGAC i canFam3.chr31 C 0 I 1890 e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=193509.000000 s hg38.chrUn_GL000218v1 130917 112 + 161147 TACCTCCTCTTGTTTCCAGTCCCATGCTCGTTTTCTCTATCACATTCTACCTTGTAATAACCTAAATCTTCTGGTGGGCAACCTTCTTCCTCAATCAAATTTGTGTTTATGA s panTro4.chr3 77206283 112 + 202329955 TACCTCCTTTTATTTCCAGTCCCATGCTCATTTTCTCTATCACATTCTACCTTGTAATAACCTAAATCTTCTGGTGGGCAAGCTTCTTCCTCAAACAAATTTGTGTTTATGA i panTro4.chr3 C 0 I 16 s nomLeu3.chr21_GL397661_2_random 130901 108 - 139590 TTCCTCCTTTTGTTTCCAGTCCCATGCTCGTTTTCTCTATCACATTCTACCTTGTAATAACCTAAATCTTCTAGTGGGCAAGCTTCTTCCT----CAAATTTGTGTTTATGA i nomLeu3.chr21_GL397661_2_random C 0 I 4 s rheMac3.chr2 128810 111 + 192599291 TACCTCCTTTTGTTTTCAGTCCTATGCTCTTTTTCTCTATCATATTCTACCTTGTAATAA-CTAAATCTTCAGGTGGGCAAGCTTCTTCCTCAATCAAATTTGTGTTTATGA i rheMac3.chr2 C 0 I 4 s macFas5.chr2 151540 111 - 192460366 TACCTCCTTTTGTTTTCAGTCCTATGCTCTTTTTCTCTATCATATTCTACCTTGTAATAA-CTAAATCTTCAGGTGGGCAAGCTTCTTCCTCAATCAAATTTGTGTTTATGA i macFas5.chr2 C 0 I 4 s papAnu2.chr2 97969 112 + 187378091 TACCTCCTTTTGTTTTCAGTCCTACGCTCTTTTTCTCTATCATATTCTACCTTGTAATAACCTAAATCTTCAGGTGGGCAAGCTTCTTCCTCAATCAAATTTGTGTTTATGA i papAnu2.chr2 C 0 I 4 s chlSab2.chr22 46097 112 - 101219884 TACCTCCTTTTGTTTTCAATCCTATGCTCTTTTTCTCTATCATATTCTACCTTGTAATAACCTAAATCTTCAGGTGGGCAAGCTTCTTCCTCAATCAAATTTGTGTTTATGA i chlSab2.chr22 C 0 I 4 e canFam3.chr31 28776157 1890 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=26898.000000 s hg38.chrUn_GL000218v1 131029 23 + 161147 TTGTGTTGGGGATTGGCATAGTA s nomLeu3.chr21_GL397661_2_random 131013 23 - 139590 CTGCTTTAGGGATTGGCTTGGTA i nomLeu3.chr21_GL397661_2_random I 4 C 0 s rheMac3.chr2 128925 23 + 192599291 CTGCTTTGGGGATTGGCCTAGTA i rheMac3.chr2 I 4 C 0 s macFas5.chr2 151655 23 - 192460366 CTGCTTTGGGGATTGGCCTAGTA i macFas5.chr2 I 4 C 0 s papAnu2.chr2 98085 23 + 187378091 CTGCTTTGGGGATTGGCCTAGTA i papAnu2.chr2 I 4 C 0 s chlSab2.chr22 46213 23 - 101219884 CTGCTTTGGGGATTGGCCTCGTA i chlSab2.chr22 I 4 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I e panTro4.chr3 77206395 16 + 202329955 I a score=237465.000000 s hg38.chrUn_GL000218v1 131052 147 + 161147 ATCCAGGTACTGCTACTGCCTTGAAAGCGGAGAATGCATCCTTCTGTCTGGATATCT--TGAGTTTCTGGATTGTAAACCTTATTAGGGCC-CATTTTTCCTAGAATTGGAGCCTCTACTTTGTTCTTGCTACTTTAGTTCACCCAGAAA- s panTro4.chr3 77206411 147 + 202329955 ATCCAGGTATTGCTACTGCCTTGAATGAGGAGACTGCGTCCTTCTGTCTGGATTTCT--TGAGTTTCTGGATCGTAAACCGTATTAGGGCC-CATTTTTCCTAGAATTGGAGCCTCTACTTTGTTCTTGCTACTTTAGTTCACCCAGAAA- i panTro4.chr3 I 16 C 0 s nomLeu3.chr21_GL397661_2_random 131036 148 - 139590 ATCCAGGTATTGCTACTGCCTTGAATGCGGAGACTGCCTCCTTCTGTCTAGATTTCT--TGAGTTTCTGGATCGTAAACCTTATTAGGGCC-CATTTTTCCTAGAATTGGAGCCTCTACTTTGTTCTTGCAATGTTAGTTGCCCCAGAAAC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 128948 150 + 192599291 ATCAAGGTATTGCTACTGCCTTGAATTCTCAGACTGCATCCTTCTGTCTGGATTTCTTCTGAGTTTCTGGATCGTAAACCTTATTAGGGCCTTATTTTTCCTAGAATTGGAG-CTCTCCTTTGTTCTTGCTACTTTAGTTCACCCAGAAAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 151678 150 - 192460366 ATCAAGGTATTGCTACTGCCTTGAATTCTCAGACTGCATCCTTCTGTCTGGATTTCTTCTGAGTTTCTGGATCGTAAACCTTATTAGGGCCTTATTTTTCCTAGAATTGGAG-CTCTCCTTTGTTCTTGCTACTTTAGTTCACCCAGAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 98108 150 + 187378091 ATCAAGGTATTGCTACTGCCTTGAATTCTCAGACTGCATCCTTCTGTCTGGATTTCTTCTGAGTTTCTGGACCGTAAACCTTAGTAGGGCCTTATTTTTCCTGGAATTGGAG-CTCTCCTTTGTTCTTGCTACTTTAGTTCACCCAGAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 46236 150 - 101219884 ATCAAGGTATTGCCACTGCCTTGAATTCTCAGACTGCATCCTTCTGTCTGGATTTCTTCTGAGTTTCTGGATCGTAAACCTTATTAGGGCCTTATTTTTCCTAGAATTGAAG-CTCTCCTTTGTTCTTGCTACTTTAGTTCACCCAGAAAG i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e tupBel1.scaffold_136731.1-86001 23194 17538 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=3102.000000 s hg38.chrUn_GL000218v1 131199 2 + 161147 GC s panTro4.chr3 77206558 2 + 202329955 AC i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 131184 2 - 139590 GT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 129098 2 + 192599291 GC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 151828 2 - 192460366 GC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 98258 2 + 187378091 GC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 46386 2 - 101219884 GC i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_74138.1-5263 4042 2 + 5263 GT i tupBel1.scaffold_74138.1-5263 n 17538 n 17538 e canFam3.chr31 28776157 1890 - 39895921 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1547129.000000 s hg38.chrUn_GL000218v1 131201 905 + 161147 ACGATCTCTGCCTAAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGAGACTTTTGTCTTCCTGCGGGGTGA-TTTTTTCATCTTACATATCATTGCTAATCTTTTTACCTTGAATGTAATTGAAATAGTTTTAATCTGTGTTACCAGCAACAAGAACCCCTTTTATGAGATGAAGAGGCCAGGTCAGTCTCATAACGTGTGTCCCCCTCCGTGTGTTGAATTTATGTCAGAGCCAGGTTCTTTCCTATTTGATGTCTCTCACAAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAATAAATTCTA-----GAGTTGATACAAGCTGTAATTTTAG-----------AGAAATTAAATTA----------------------------------------------------------------------------GCAAGTAGAATTAGATTATATACAACCTAATCAAC--------TTTTTTTTTTTTCCTGAGGATGACCAAGATTTGGGCTTCAGTGACAATAGTTATCCCCTAAATATTTATACTCAA--Tctaggatcaccagtaaaattttgaatagaggtgatgaacacacacatc--------cttttcttgtcctaatctatgtggtttaaacatttacgctttcacaattaaatataatattgtttatatgttttgttgtggatgctttccaccacttcgagaaaatttctttttctagcttgctgagagttt-------------------------------------ttTTTTTTTTTT---AATCAGCaatagatatttctccaaagaaaatatccaaattaccaacaggtacatgaaataaatgctcagcatcactaatcatcagggaaatgcaaatcaaaaccacaaagagat-attgcctcaagcctgttagaatggtcttattaaaacaaaaagataacgagtg-ttaacaa---tggggagaaattggaacacttgtacagtgtttctgggaaagtaaaactgtgcagcctctatggaaaacagtacagttgtt s panTro4.chr3 77206560 984 + 202329955 ATGAACTCTGCCTGAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGAGACTTTTGTCTTTCTGCGGGGTGA-TTTTTTCATCTTACATACCATTGCTAATCCTTTTATCTTGAATGTAATTGAAATAGTTTTAATCTGTGTTACCAGCAACAAGAACCCCTTTTATGAGATGAAGAAGGCAGGTCAGTCTCATAACATGTGTCCCCCTCCTTGTGTTGAATTTATGTCAGAGGCAGGCTCTTTCCTGTTTGATGTCTCTCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAATAAATTCTA-----GAGTTGATACAAGCTGTAATTTTAG-----------AGaaattaaattaagttgcttaatttaatttaatttaagcaacttttgcttaaattaagcaacttaatttCTCTAAAATTAAGCCCAAAGCAAGTAGAATTAGATTATATACAACCTAATCAACCTTTTTCTTTTTTTTTTTTTCCTGAGGATGACCAAGATTTGGGCTTCATTGACAATAGTTGTCCCCTAAATATTTATACTCAAAATctaggatcaccagtacaatgttgaatagaggtgatgaacacacacatc--------cttttcttgtcctaatctatgtggtttaaacatttacgctttcacccttaaatgtaatattgtttatatgttttgttgtggatgctttccatccctttgaaaaaatttctttttttagcttgctgagagttt-------------------------------------ttTTTTTTTTT----AATCAGCaatagatatttctccaaagaatatatccaaatgaccaacaggtacctggaaaaaatgcttaacatcactaatcatcagggaaatgcaaatcaaaaccacaaagagat-attgcctcaaacctgttagaatggtctta------gaaaaagataactagtg-ttaacaa---tggggagaaattggaacacttgtgcagtgtttctgggaatgtaaaactgtgcagcctctatggaaaacagtatggtggtt i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 131186 951 - 139590 AGGATCTCTGCCTGAATTTCAAAGTGTTGGTTAGTTTAAATATCCTTTTGTGAGACTTTTGTCTTCCTGAGGGGTGATTTTTTTCATCTTACATACCATTGCTAATACTTTTATCTTGATTATAATTGAAATAGTTTTAATCTGTGTTACCAGCAACAAGAACCCCTTTTATGAGATGGAGAAGGCAGGTCAGCCTCAAAAC--GTGTCCCTCTGCATGTGTTGAATTTATGTCAGAGCCAGGCTCTTTCCTATTTGATGTCTCTCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAATAAATTCTAGAGTTGAGTTGATACAAGCTGTAATTTTAG-----------AGAAATTAAATTAATTTGC-------AACTTAATTTAAA-----------------------------TTCTTTAAAATTAAGCCCAAAGCAAGTAGAATTAGATTATATACAACTTAATCAAC------------TTTTTTTTTCTGAGGATGACTAAGATTTGGGCTTCAGTGACAATAGTTGTCCCCTAAATATTTATACTCAAAGTctaggatcaccagtacaatgttgaatagaggtgaccaacacacacatccacacatgcttttcttgtcctaatctatgtggtttaaacatttacgctttcaccattaaatatcatattgtttatatgttttgttatggatgctttccaccacttcgagaaaatttctttttctagcttgctgagagttt-------------------------------------ttTTTTTT-------AACCAGCaatagatatttctccaaagaaattatccaaatgaccaacaggtacatgaaaaaaatgctcaatgtcactaatcatcagggaaatgcaaatcaaaaccacaaagagat-attgcttcaagcctgttagaaaggccttactaaaataaaacgataatgagtg-ttaacaa---tggggagaaactggaacacttgtacagtgtttctgggaatgtaaaactgtgcagcctctatggaaaacagtatgttggtt i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 129100 998 + 192599291 ATGATCTCTGCCTGAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGGGACTTTTGTCTTCTTGTGGGGTGA-TTTTTTCATCTTAGATACCATTGTTATTCCTTTTATCTTGAATGTAATTGAAATAGTTTTAATCTGTGTTACCAACACCAAGAATCCCTTTTATGAGATGGAGAAGGCAGGTTAGTCTCATAGCACGTGTCCCCCTCCATGTGTTGAATTTATGTCAGAGCTAGGCTCTTTCCAATTCGATTTCTCCCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAGTAAATTCTA-----GAGTTGATACAAGCTGTAATTTTAGCAATTTAATTTAGAAATTAAATTAAGC----------AACTTAATTTAAT-----------------------------TTCTCTAAAATTAAGCCCAAAACAAGTAGAATTAGATTGTATACAACCTAATCAAC---TTTTTTTTTTTTTTTTTCCTGAGAATGACCAATATTTGGGCTTCAGTGACAATAGTTGTCCCCTAAACATTCATACTCAAAATctaggatcaccggtacaatgttgaatagaggtgaagaacacacacatc--------cttttcttgtcctaatctatgtggtttaaacatttaggatttcaccattaaatatagtattgtttatgtgttttgttgtggatgctttccatcactttgagaaaatttctctttctagcttactgagagttt----ttTGtttgtttgtttgtttctttttctttttc-ttttttttttttttAAATCAGCaatagatatttctccaaagaaaatatccaaatgaccaacaggtacatgaaac-aatgctcaacatcactaatcatcagggaaatgcaaatcaaaaccacgaagagataattgcctcaaacctgttagactggtcttattaaaagaaaaagataatgagtg-ttaacaatggtggggagaaattggaacacttgtacagtgtttctgggaatgtaaaactgtgcagcctctatggaaaacagtatggtggtt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 151830 1002 - 192460366 ATGATCTCTGCCTGAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGGGACTTTTGTCTTCTTGTGGGGTGA-TTTTTTCATCTTAGATACCATTGTTATTCCTTTTATCTTGAATGTAATTGAAATAGTTTTAATCTGTGTTACCAACACCAAGAATCCCTTTTATGAGATGGAGAAGGCAGGTCAGTCTCATAGCACGCGTCCCCCTCCATGTGTTGAATTTATGTCAGAGCTAGGCTCTTTCCAATTCGATTTCTCCCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAGTAAATTCTA-----GAGTTGATACAAGCTGTAATTTTAGCaatttaatttagaaattaaattaagc----------aacttaatttaat-----------------------------ttCTCTAAAATTAAGCCCAAAACAAGTAGAATTAGATTGTATACAACCTAATCAAC----ATTTTTTTTTTTTTTTCCTGAGAATGACCAATATTTGGGCTTCAGTGACAATAGTTGTCCCCTAAACATTCATACTCAAAATctaggatcaccggtacaatgttgaatagaggtgaagaacacacacatc--------cttttcttgtcctaatctatgtggtttaaacatttaggatttcaccattaaatatagtattgtttatgtgttttgttgtggatgctttccatcactttgagaaaatttctctttctagcttactgagagtttttTGtttgtttgtttgtttgtttctttttctttttctttttttttttttttAAATCAGCaatagatatttctccaaagaaaatatccaaatgaccaacaggtacatgaaac-aatgctcaacatcactaatcatcagggaaatgcaaatcaaaaccacgaagagataattgcctcaaacctgttagactggtcttattaaaagaaaaagataatgagtg-ttaacaatggtggggagaaattggaacacttgtacagtgtttctgggaatgtaaaactgtgcagcctctatggaaaacagtatggtggtt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 98260 951 + 187378091 ATGATCTCTGCCTGAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGGGACTTTTGTCTTCTTGTGGGGTGA-TTTTTTCATCTTAGATACCATTGCTATTCCTTTTATCTTGAATGTAATTGAAATAGTTTTAATCTGTGTTACCAACACCAAGAATCCCTTTTATGAGATGGAGAAGGCAGGTCAGTCTCATAGCACATGTCCCCCTCCATGTGTTGAATTTATGTCAGAGCTAGGCTCTTTCCTATTTGATTTCTCCCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAATAAATTCTA-----GAGTTGATACAAGCTGTACTTTTAGc-----------------------------------------aatttaat-----------------------------ttctctaaaattaAGCCCAAAACAAGTAGAATTAGATTGTATACAACctaatcaac---ttttttttttttttttttctgagaatgacCAACATTTGGGCTTCAGTGACAATAGTTGTCCCCTAAACATTCATACTCAAAATCTAGGATCACcggtacaatgttgaataaaggtgatgaacacacacatc--------ctTTTCTTGTCCTAATCTATGTGATTTAAACATTTAGgatttcaccattaaatataatattgttTATGTGTTTTGTTGTGGATGCTTTCCATCACTTTGAGAAAATTTCTCTTTCTAGcttgctgagagttt----t---------------tttttttttctttttc-tttttttttttttt-aatcagcaatagatatttctccaaagaaaatatccaaatgaccaacaggtacatgaaac-aatgctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaaagagataatTGCCTCAAACCTGTTAGAATGgtcttattaaaagaaaaagataaagagtg-TTAACAATGGTggggagaaattggaacacttgtaCAGTGTTTCTGGGAATATAAAACTGTGCagcttctatggaaaacagtatggtggtt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 46388 962 - 101219884 ATGATCTCTGCCTGAATTTCAAAGTGTTGGCTAGTTTAAATATCCTTTTGTGGGACTTTTGTCTCCTTGTGGGGTGA-TTTTTTCATCTTAGATACCATTGCTATTCCTTTTATCTTGAATGTAATTGAAATAGTTGTAATCTGTGTTACCAACACCAAGAATCCCTTTTATGAGATGGAGAAAGCAGGTCAGTCTCATAGCACGTGTCCCCCTCCATGTGTTGAATTCATGTCAGAGCTAGGCTCTTTCCTATTCGATTTCTCCCACCAAATTCCAGTGTTTATGTCCTAGGAGGTGCCCAGTAAATTCTA-----GAGTTGATACAAGCTGTAATTTTAGCaatttaatttagaaattaaattaagc----------aacttaatttaat-----------------------------ttCTCTAAAATTAAGCCCAAAACAAGTAGAATTAGATTGTATACAACCTAATCAAC-----TGTTTTTTTCCCCCCCCTGAGAATGACCAAGATTTGGGCTTCAGTGACAATAGTTGTCCCCTAAACATTCATACTCGAAATctaggatcaccggtacaatgttgaatagaggtgatgaacacacacatc--------cttttcttgtcctaatctatgtggtttaaacatttaggatttcaccattaaatataatattgtttatatgttttgttgtgaatgctttccatcactttgagaaaatt----tttctggcttgctgagaggtt----ttT------------------------------TTTTTTTTTTTTTT-AATCAGCaatagatatttctccaaagaaaatatccaaatgaccaacaggtacatgagac-gacgctcaacatcactaatcatcagggaaatgcaaatcaaaaccacaaagagat-attgcctcaaacctgttagactgatctttttaaaagaaaaaggtaatgagtgtttaacaatggtggggagaaattggaacacttgtacagtgtttctgggaatgtaaaactgtgcagcctctatggaaaacagtatggtggtt i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=2099386.000000 s hg38.chrUn_GL000218v1 132106 1707 + 161147 cctcaaaaaaattaagaaagtagaactaccatatgatctagcaatctcacttcaggttatttatctgaaagaattgagattgggatgattctcaggctcattgcagcattatttacacta-atcaaaatgtggaaataaggttaatgtttattggcagatgaatagataaagaaaatgtggtatattcatacaacggaatattattcagctttaa-aacaagaaaatccggcaatatgcaacatggatgaacctagaggacattaatgctacgtaaagtaaatcagtcacagaaggacaaactgtatgattccacttgtataaagtatctaagatagccaaattaattagaatcacagattagaatggtgatagccCTTTAAGTTGAAATCaattttgcattcctgggttttgt--agttttgctatgaggattctgactcataaaacaagtttggaatttcccccttctt-----ctgaaataatttaaaaattttattt--ttttaaaacgtttgaaagaattcaccagtaaaactctttggatgtggagtttgcttattttttaattt-ctttagttttatgtttttatgtgcaggtatttgacaatt----taattactttaataaatgtcaattacttcatatattccatttaatcttgtgaatttttttataag-tttcttttcaaggaattcaccctttcatccaagtaatgaaaattagtataaaatgtttcacaatattccattatcttgttaatgtctcttgtgtctacaactgtacaatcttattaatccctgatatttataatttgcgttttctttctttctcacagaactaacttttggccatgttaattttctcctgtgtctgttttctgtctcattgatttctaatttctgttttattttctttcttctacttgttttggacttaatttgctctcttgttttagattttctttttaaggtagaaaattagtgcacttgttttgaacttctcttttttagaataagcatttatacaaaaaatttactctgggtctgcttaactt-atcccacatattttgatatagtatatttttatttgtattcagttcaatgtattttaaggtgtttcttatgatttctttcttgagctaaagggcattttaaggtgtatttaaatcttccaatagtgtagactttcctgggtagcttgttttcacccatttcaactcattttcattatggtcagaaagtatactttctatgattacagtgttttgaaacttcttgagagatattttgtggtctatagcctattgataaatgtttcatgtgtagcataatagaacatatattctattttcttggtcaatattgattaggtcagggtgttgtcaaaattattttaccttaactttctttagttattctatcaG----CAATACAGCAttatgtcttcataattacttgacattttatcattatgaaatagctttctgttgtaatattgcttgtttggaggtctactttttctta-----atatagccacataagatttcttgtgcttgttgtttccttggtatacttggaaattatttaactctcaacttatctataccataatatttggcatgcatctcttataggtacttttattatatagttggacaatctg-tgttttatttggagtatttaaattacatttgaaataattattgataaggttggagttaagccta s panTro4.chr3 77207544 1713 + 202329955 cctcaaaaaaattaagaaaatagaactgccatatgatctagcaatctcacttcaggttatttatctgaaagaattgaaattgggatgattctcaggctcattgtagcattatttacacta-atcaaaatgtggaaataagtttaatgtctattggcagatgaatagataaagataatgtggtatattcatacaacggaatattattcagctttaa-aacaagaaagcccggcaatatgcaacatggatgaacctagaggacagtaatgctaagtaaagtaaatcagtcacagaaggacaagccatatgattccacttgtataaagtatctaagatagccaaattcattagaatcacagattagaatggtgatagcTCTTTAAGTTGAAATCaattttgcattcctgtgttttgt--agttttggtgtcaggattctgactcataaaacaagtttggaatttcccccttctttatttcttaaataatt-aaaaatttttttt--tt---aaacatttgaaagaattcaccagcaaaactctttggatctggagtttgcttatttttttattttctttagttttatgttt--atgtgcaggtatttgacaattaatttaattactttaataaatgtcaattacttcaaaagttccatttaatcttgtgaatttttttatgtt-ttttttttcaaggaattcaccctttcatccaagtaatgaaaattggtataaaatgtttcacaatattccattatctagttaatgtctcttgtgtctacaaatgtacaatctcattaatccctgatatttgtaatttgagttttctttctttctcacagaactaacttttggccatgttaactttctcctgtgtctgttttctgtctcattgatttctaatttctgttttatttcctttcttctacttgttttggacttaatttgctctcttgttttagattttctttttaaggtagaaaattagttcacttgtcaaga---------ttttagaataagcatttatacaaaaaatttactttgggtctgcttaactttatcccacacattttgatatagtatatttttatttctcttcagttcaatgtattttaaggtgtttcttatgacttcttccttgagctaaagagcattttaaggtgtatttaaatcctccaatagtgtggactttcctggatagcttgtttttacccatttcaactcattttcattatggtcagaaagcatacttactatgattacagtgttttgaaacttcttgagagatattttgtggtctatagtctattgataaatgtttcatgtgtagcataatagaacatatattctatcgtgttggtcaatatcgattaggtcaagctgttgtcaaaattattttatcttaactttctttaattattctatcagttaGCAATATAGCAttatgtcttcataattacttgacattttatcattatgaaatagctttctgttgtaatattgcttgtttggaggtctacgttttcttatattaacatagccacataagatttcttgtgcttgttgtttccatggtatacttggaaattattttactctcaacttatctataccataatatttggcatgcatctcttataggtacttttattatccagttggacaatctggtgttttatttggagtatttaaattacatttgaaataattattgataaggtttgatttaagccta i panTro4.chr3 C 0 C 0 s rheMac3.chr2 130098 1711 + 192599291 cctcaaaaaaa-taacaaagtagaactactgtatgatctagcaatctcacttcaggttatttatctgaaataattgaaattgggatgattctcaggctcattgcagcattatttacacta-ttcaaaatgtggaaataaggttaatgtctattggcagatgaatagata-----aatgtggtatattcatacaatggaatattattcagctttaaaaagaagaaagccctgcaatatgcagcatggatgaacctggaggacattaatgctaagtagagtaaatcagtcccagaaggacaaactgtatgattccacttgtatgaagtatctaagatagccaaattcattagaatcacagattagaatggtgatagcTCTTTAAGTGGAAATCGATTTTGCCTTCCTGGGTtttgtaaagttttggtttcaggattctgactcataaaacaagtttggcatttcccccttctttatttctgaaataatttagaaattttattttattttttaatgtttgaaagaatttgccagcaaaactctttggatgtggagtttccttatttttaaattttctttagttttatgtttttatgtgcaggtatttgacaattaatttaattactttaataa----cagttacttccaatattccatttagtcttgtgaggttttttgtaag-ttttttttcaaggaattgaccctttcatccaagtaatgagaattgctataaaatgtttcacaatattccattatcttgttagtgtctcttgtgtctacagctgcacaatctcattaatccctgatatttgtaatttgcattttctt--tttctcacagaactaa-ttttggccatgttaattttccccaatgtctgttttctgtctcattgatttctaatttctgttttatttcctttcttctacttgttttgggcttaatttgctctcttgttttagattttctttttaaggtagaaaattagttcatttgttttgaacttctcttttttagaacaagtatttatacaaaaaatttattctaggtttgcttaactttatcccacacattttgatatagtatatttttatttgtattcagttcaatgtattttaaggtgtttcttatgatttcttccttgagctaaagggcattttaaggtgtatttaaatctttcaatagtgtagacttttctggacagcttg-ttttacccatttcaactcattttcattatggtcagaaagcatactttcta----taaagtgttttgaaacttcttgagagatattttgtggtctatagtctactgataaatgtttcacgtgtagtataatagaacatatattctacagtcttggtcaatattgattcggtcaagctgttgtcaaaattatttcatcttaactttctttagttattctatcagttaGCAATATAGCAttatgtcttcataactacttgacattttatcattatgaaatagccttctggcgtaatattgcttgtttggagatctatgttttcttatattaatatggccacataagatttcttgtgattgttgtttctatggtatatttggaa---attttactctcaacttatctgtaccataatatttgccatgcaactcttataggtacttttattatccagctggacaatctg-tgttttatttggagtgtttaaattacatttgaaataattattgataaggttggatttaagctta i rheMac3.chr2 C 0 C 0 s macFas5.chr2 152832 1712 - 192460366 cctcaaaaaaa-taacaaagtagaactactgtatgatctagcaatctcacttcaggttatttatctgaaataattgaaattgggatgattctcaggctcattgcagcattatttacacta-ttcaaaatgtggaaataaggttaatgtctattggcagatgaatagata-----aatgtggtatattcatacaatggaatattattcagctttaaaaagaagaaagccctgcaatatgcagcatggatgaacctggaggacattaatgctaagtagagtaaatcagtcccagaaggacaaactgtatgattccacttgtatgaagtatctaagatagccaaattaattagaatcacaggttagaatggtgatagcTCTTTAAGTGGAAATCGATTTTGCCTTCCTGGGTtttgtaaagttttggtttcaggattctgactcataaaacaagtttggcatttcccccttctttatttctgaaataatttagaaattttattttattttttaatgtttgaaagaatttgccagcaaaactctttggatgtggagtttccttatttttaaattttctttagttttatgtttttatgtgcaggtatttgacaattaatttaattactttaataa----cagttacttccaatattccatttagtcttgtgagattttttgtaagtttttttttcaaggaattgaccctttcatccaagtaatgaaaattgctataaaatgtttcacaatattccattatcttgttagtgtctcttgtgtctacagctgcacaatctcattaatccctgatatttgtaatttgCATTTTCTt--tttctcacagaactaa-ttttggccatgttaattttccccaatgtctgttttctgtctcattgatttctaatttctgttttatttcctttcttctacttgttttgggcttaatttgctctcttgttttagattttctttttaaggtagaaaattagttcatttgttttgaacttctcttttttagaacaagtatttatacaaaaaatttattctaggtttgcttaactttatcccacacattttgatatagtatatttttatttgtattcagttcaatgtattttaaggtgtttcttatgatttcttccttgagctaaagggcattttaaggtgtatttaaatctttcaatagtgtagacttttctggacagcttg-ttttacccatttcaactcattttcattatggtcagaaagcatactttcta----taaagtgttttgaaacttcttgagagatattttgtggtctatagtctactgataaatgtttcacgtgtagtataatagaacatatattctacagtCTTGGTCAATATTGATTCGGTCAAGCTGTTGTCAAAATTATTTCATCTTAACTTTCTTTAGTTATTCTATCAGTTAGCAATATAGCAttatgtcttcataactacttgacattttatcattatgaaatagccttctggcgtaatattgcttgtttggagatctatgttttcttatattaatatggccacataagatttcttgtgattgttgtttctatggtatatttggaa---attttactctcaacttatctgtaccataatatttggcatgcaactcttataggtacttttattatccagctggacaatctg-tgttttatttggagtgtttaaattacatttgaaataattattgataaggttggatttaagctta i macFas5.chr2 C 0 C 0 s papAnu2.chr2 99211 1717 + 187378091 cctcaaaaacattaagaaagtagaactactgtatgatctagcaatctcacttcaggttatttatctgaaataatTGAAATTGGGATGATTCTCAggctcattgcagcattatttacactA-TTCAAAATGTGGAAATAAGGTTAATGTCTATTggcagatgaatagata-----aatgtggtatattcatacaatggaatattattcagctttaaaaagaagaaagcccTGCAATAtgcagcatggatgaacctggaggacattaatGCTAAGTAGAGTAAatcagtcacagaaggacaaactgtatgattccacttgtatgaaGTATCTAAGATAGCCAAATTCGTTAGAATCACAGATTAGAATGGTGATAGCTCTTTAAGTGGAAATCAGGTTTGCATTCCTGGGGTTTGTAAAGTTTTGGTTTCAAGATTCTGACTCATAAAACGAGtttggt-tttcccccttctttatttctgaaataattttaaaattttatt---tttttaaatgtttgaaagaaTTCACCAGCAAAACTCTTTGGATCTGgagtttgcttatttttaaattttctttagttttatgtttttatgtgcaggtatttgacaattaatttaattactttaataaatGTCAGTTACTTCCAATATTCCATTTAGTCTTGTGAGgttttttgtaag-ttttttttcaAGGAATTGACCCTTTCATCCAAGTAATGAAAATTGCTATAAAATGTTTCACAATATTCCATTATCTTGTTAATGTCTCTTGTGTCTACAGCTGTACAATCTCATTAATCCCTGATATTTATAATTTgcgttttctt--tttctcacagaaCTAA-TTTTGGCCATGTTAATTTTCCCCTATGtctgttttctgtctcattgatttctaatttctgttttatttcctttcttctacttgttttgggcttaatttgctctcttgttttagattttctttttaaggtagaaaattagttcatttgttttgaacttctcttttttagAATAAGTATTTATACAAAAAATTTATTCTGGGTTTGGTTAACTTTATCCCACACATTTTGatatggtatatttttatttgtattcagtTCAATGTATTTTAAGGTGTTTCTTATGATTTCTTCCTTGAGCTAAAGGGCATTTTAAGgtgtatttaaatttttcaatagTGTAGACTTTTCTGGACAGCTTGTTTTTACCCATTTCAACTCATTTTCATTATGGTCAGAAAGCATACTTTCTATGAGTAAAGTGTTTTGAAACTTCTTGAGAGATATTTTGTGGTCTCTAGTCTATTGATAAATGTTTCACGTGTAGTATAATAGAACATATATTCTATAGTCTTGGTCAATATTGATTAGGTCAAGCTGTTgtcaaaattatttcatcttaaCTTTCTTTAGTTATTCTATCAGTTAGCAATATAGCATTACATCTTCATAACTACttaacattttatcattatgaaatagcCTTCTGGTGTAATATTGCTTGTTTGGAAATCTACTTTTTCTTGTACTAATACAGCCACATAAGATTTCTTGTGATTGTTGTTTCCATggtatatttggaa---attttactCTCAACTTATCTGTACCATAATATTTGGCATGCAACTCTTATAGGTACTTTTATTATCCAGCTGGACAATCTG-TGTTTTATTTGGAGTGtttaaattacatttgaaataattattgataAGGTTGGATTTAAGCTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 47350 1718 - 101219884 cctcaaaaacattaagaaagtagagctactgtatgatctagcaatctcacttcaggttatttatgtgaaataattgaaattgggatgattctcaggctcactgcagcgttatttacactatttcaaaatgtggaaataaggtttctgtctgttggcagatgaacagata-----catgtgatgtattcatacagtggaatattattcagctttaagaagaagaaaaccctgcaatatgcagcatggacgaacctggaggacgttaatgctcagtagagtaaatcggtcccagaaggacaaactgtatgattccacttgtatgaagtatctgagatagccaaattcattagaatcgcagattagaatggtgatagcTCTGTAAGTGGAAATCAGTTTTGCATTCCTGGGTtttgtaaagttttggtttcaggattctgactcataaaacaagtttggcatttcccccttctttatttctgaaataatttagaaattttattttattttttaatgtttgaaagaattcaccagcaaaactctttggatatggagtttgcttatttttaaattttcattagttttatgtttttatgtgcaggtatttgacaattaatttaattactttaataaatgtcagttacttccaatattccatttagttttgtgaggttttttgtaag--tttttttcaaggaattgaccctttcatccaagtaatgaaaattgctataaaatgtttcacaatattccattatcttgttagtgtctcttgtgtctacagctgcacaatgtcattaatccctgatatttgtaatttgcgttttctt--tttctcacagaactaa-ttttggccatgttaattttcccccatgtctgttttctgtctcattgatttctaatttctgttttatttcctttcttctacttgttttgggcttaatttgctctcttgttttagattttctttttaaggtagaaaattagttcatttgttttgaacttctcttttttagaataagtatttatacaaaaattttattgtaggtttgcttaactttatcccacacattttgatatagtatatttttatttgtattcagttcaatgtattttaaggtgtgtcttatgatttcttccgtgagctaaacggcattttaaggtgtatttaaatctttcaatagtgtagacttttctggatagcttgtttttacccatttcaactcattttcattatggttagaaagcatactttctatgagtaaagtgttttgaagcttcttgagagatattttgtggtctatagtctattgataaatgtttcacatgtagtataatagaacatatattctatagtCTTGGTCAATATTGA---AGTCAAGCTATTGTCAAAATTATTTCATCTTAACTTTCTTTAGTTATTCTATCAGTTAGCAATATAGCAttacgtcttcataactacttgacattttatcattataaaatagccttctggtgtaatattgcttgtttggagatctacattttcttatattaatacggccacataagatttcttgtgattgttgtttccatggtatatttggaa---attttactctcaacttatctgtaccataatatttggcatgcaactcttacaggtgcttttattatccagctggacaatctg-tgttttgtttggagtgtttaaattacatttgaaataattattgataaggttggatttaagctta i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e nomLeu3.chr21_GL397661_2_random 132137 0 - 139590 C e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1938.000000 s hg38.chrUn_GL000218v1 133813 7 + 161147 ctatttt s panTro4.chr3 77209257 7 + 202329955 ctatttt i panTro4.chr3 C 0 C 0 s rheMac3.chr2 131809 7 + 192599291 ctatttt i rheMac3.chr2 C 0 I 1098 e canFam3.chr31 28776157 1890 - 39895921 I e nomLeu3.chr21_GL397661_2_random 132137 0 - 139590 C e chlSab2.chr22 49068 0 - 101219884 C e papAnu2.chr2 100928 0 + 187378091 C e macFas5.chr2 154544 0 - 192460366 C e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=6942.000000 s hg38.chrUn_GL000218v1 133820 108 + 161147 tgcttttttttttttttttttttttttttttttttttttgagacggagtctggccctgtcgcccaggctggagtgcagtggcgggatctcgcctcactgcaagctctg s panTro4.chr3 77209264 95 + 202329955 -gcttttttttttttttttttttaatt------------gagacggagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccg i panTro4.chr3 C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e nomLeu3.chr21_GL397661_2_random 132137 0 - 139590 C e chlSab2.chr22 49068 0 - 101219884 C e papAnu2.chr2 100928 0 + 187378091 C e macFas5.chr2 154544 0 - 192460366 C e rheMac3.chr2 131816 1098 + 192599291 I e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=44319.000000 s hg38.chrUn_GL000218v1 133928 209 + 161147 cctcccggattcatgccattttcctgcctcagcatccggagtagctgggactacaagtgcccaccaccatgcccggctaattttt-gcatttttagtagagatggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccactggcctcggcctcccaaagtgctgggattacaggc-tgagccaccgcgcccagc s panTro4.chr3 77209359 210 + 202329955 cctcccgggttcccgccattctcctgcctcagcctcataagtagctgggaccacaggcgct-gccaccacgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccacccgcctcggcctccccaagtgctgggattacaggcgtgagccactgcacccggc i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 132137 208 - 139590 cctctcaggttcccgccattctcctgcctcagcctcccgagtagatgggacaacaggcacc-accaccgtgcctggctaattttttgtattttcagtagagatggggtttcactgtgttaacgaggatggtctcgatctcctgacctagtgttccacctgcctcatcctccc--agtgctgggattacaggtgtgagccactgcgcctagc i nomLeu3.chr21_GL397661_2_random C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e chlSab2.chr22 49068 0 - 101219884 C e papAnu2.chr2 100928 0 + 187378091 C e macFas5.chr2 154544 0 - 192460366 C e rheMac3.chr2 131816 1098 + 192599291 I e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1155543.000000 s hg38.chrUn_GL000218v1 134137 953 + 161147 ctattttgctc-ttatcttctatttgttccatcattttttgctcctctgttctttctttcatgcctttttatattaactgaacaatattcagcgttccattttaattcctttattggcattttagaagaatatcttcatataatgtggtggttctctagggattgtaataaacatcctgggcttatcgcagtccacttactgt--taatagtcaacattttcatgtaacataaagaaaagttgtggcaaaattgttgcgtttagtctcctgtcagagctattaatttagaatattttactctacatacattattaatagtactcttaattttttatttaaaccatcagttgtttgttataaaactaaaagaaaaaag-ccttagtttttcctgtttatgcacatgccattcctagagcttctccttacttcctgtaggtcagaatttccatctgttgttatctttctttagtct-aaaaaatttccgtttgcatttcttgtatctaggtctgctaatgacaattgttcgaagctttcttttatctgaataaatctttattttcgcaagaattactttttctagttatagaatttggagttgacag---tttttttttattttaaagatgtagtttcattgctttttaaag--tgtcatttctgatgacaggtagatgacctatttgtttccacgtatgtaaattattttctccctccctttagctactttcaagatttactctttttttttgcccagtggtttgactatggtatgtctacatttggttctgtatatttttattctgttctttgagtttcttaaacctgtaagttgatatatgctgacaattaggaaaacttttggtctttactttttcaaatagctttttctgtctcatttt---cttctctactctttctaggagtccaattatattagtgctagactggtcatatttttattat s panTro4.chr3 77209569 949 + 202329955 ctattttgctc-ttatgttctatttgttccatcattttttgctcctctgttctttctttcatgcctttttatatcaactgaacaacactcagtgttccattttaattcctttattggcattttagaagaatatcttcatataatgtggtggttctctagggattataataagcatcctgggcctatcacactccacttagtgtgttaatagtcaacgttttcatgtaacatgaagaaatgttgcagcaaaattgttgtgtttagtcttctgtcagagctattaacttagaatattttactccacatacattatcaatagtacacttaattttttatttaaaccatcagttgtt----ataaaactaaaagaaaaaag-ccttagtttttcatgtttatgcacttggcattcctagagcttctccttgcttcctgtaggtcctaatttccatctgttgttatctttctttagcct-aaaacatttccgtttgcatttcttgtatttaggtctgctaatgacaaatattcgaagctttcttttatctgaataaatctttattttctcgacaatgactttttctagttatagaatttggagttgacagg--tttttttttattttgaagatgtagtttcattgctttttaaac--tgtcatttctgatgacaggt----catctatttgtttccatgtatgtaaattattttctccctccctttagctactttcaagatttactctttttta--gcccagtggtttgactatggtatgtctacatttggttctctttatttttattctgttctttgagtttcttaaacctgtaagttgatatatgctgacagttaggaaaactttttgtctttactttttcaaatagctttttctgtctccttttgttcttctctactctttctaggactccaattatattagttctagactggccctatttttattat i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 132345 953 - 139590 cTATTTTGCTC-ttatattctatttgttccttcattttttgctcctctgttctttctttcatgcctttttacattaactgaacaatattcagcattgcattttaattcctttattggcattttagaagaatgtcttcatataatgtggtggttctctagggattataataagcatcctgggcttatcgcagtccacttagtgt--taataatcaacgttttcatgtaacgtaaagaaatgttgcagcaaaattgttgtgtttagtctcctgtcagagctattaatttagaatattttactctacacacattatcaatactacacttaattttttatttaaaccatcagttgtttgttataaaactaaaagaaaaaag-ccttagtttttcatgtttatgcacttgccattcctagagcttctccttgctttctgtaggtccaaatttccatctgttgttatctttctttagcct-aaaaaatttccgtttgcatttcttgtatttaggtctgctaatgacaaatgtttgaagctttgttttatctgaataaatctttattttctcaagaattactttttctagttatacaatttggagttgacaggt-tttttttttattttggggatgtagtttcattgctttttaaac--tgtcatttctgatgacaggtcatctgtctatttgtttccatgtatgtaaattattttctccctccctttagctactttctacatttactcttttttt--gctgagtggtttgactatggtatgtatacatttggttctctttatttttattctgttctttgagtttcttaaatctgtaagttgatatatgctgacaattaggaaaacttttggtctttactttttcaaatagctttttctgtctcattttctgcttctctactctttctaggactccaattatattagttctagactcgtcctattt---ttat i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr2 154544 961 - 192460366 ctattttgctctttatgttctactttttccatcattttttcctccactgttctttctttcatggctttttatattaattgaacaatattcagtgttcccttttaattcctttattggcattttagaagaatatcttcatatgatgtgatggttctctagggattataataaaaatcctgggcttatcgccctccactcagtgt--taatactcaatgttttcatgtaacataaagaaatattgcagcaaaattgttgcatttagtctcctgtcagagctattaatttagaatattttactctacatgcattatcaatagtacacttaattttttattgaaaccatcagttgtttgttataaaactgaaagaaaaaaacccttaatttttcatgtttatgcacatgtcattcctagagcttctcctcgcttcctgtaggtcagaatttccatctgttgttatctttctttagcct-aaaaaatttccatttgcatttcttgtatttaggtctgctaatgacaaatgtttgaagctttcttttctctgaataaatctttattttctcaataattactttttctagttatagaatttggagttgacaggtattgttttttattttgaagatgtagtttcattgctttttaaactttgtcatttctgatgacaggtcatctctctatttgtttccatgtatgtaaattattttctctatccctttagctactttcaagatttactcttttttt--gcccagtggtttgactatggtatgtctacatttggttctctttatttttattctgttcttcgagtttcttgaatctgtaagttgatatatgctgacaattaggaaaactgttggtctttactttttcaaatagctttttctgtctcattttctccttctctactctttctaggactccaattatgttagttctagactggtcctatatttattat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 100928 961 + 187378091 CTAttttgctctttatgttctattttttccatcattttttcctccactgttctttctttcatggctttttATATTAATTGAACAATATTCAGTGTTCCCTTTTAATTCCTTTATTGGCATTTTAGAAGACTATCTTCATATGATGTGGTGGTTCTCTAGGGATTATAATAAAAATCCTGGGCTTATCGCCCTCCACTTAGTGT--TAATACTCAATGTTTTCATGTAACATAAAGAAATGTTGCAGCAAAATTGTTGCATTTAGTCTCCTGTCAGAGCTattaatttagaatattttactcTACATGCATTATCAATAGTAcacttaa-tttttattgaaacCATCAGTTGTTTGttataaaactgaaagaaaaaaacccttaatttttcatctttatgcACATGTCATTCCTAGAGCTTCTCCTCGCTTCCTGTAGGTCAGAATTTCCATCTGTTGTTATCTTTCTTTAGCctaaaaaaatttccatttgcatttcttgTATTTAGGTCTGCTAATGACAGATGTTTGaagctttcttttctctgaataaatctttattttctcaaGAATTACTTTTTCTAGTTATAGAATTTGGAGTTGACaggtattgttttttattttgaagatgtagtttcattgctttttaaactttgtcatttctgatgaCAGGTCATCTGTCTATTTGTTTCcatgtatgtaaattattttctctatccCTTTAGCTACTTTCAAGATTTACTCttttttt--GCCCAGTGGTTTGACTATGGTATGTCTACATTtggttctctttatttttattctgttctttgagtttcttgaaTCTGTAAGTTGATATATGCTGACATTTAGGAAAACTGTTGGTCTTTACTTTTTCAAATAgctttttctgtctcattttctccttctctacTCTTTCTAGGATCCCAATTATGTTAGTTCTAGACTGgtcctatttttattat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 49068 959 - 101219884 ctattttgctctttatgttctatttttcccatcattttttcctccactgttctttctttcatggctttttatattaattgaacaatattcagtgttcccttttaattcctttattggcattttagaagaatatcttcatatgatgtggtggttctctagggattataataaaaatcctgggcttatcgccctccacgtagtgt--taatactcaatgttttcatgtaacataaagaaatggtgcagcaaaattgttgcatttagtctcctgtcagagctattaatttagaatattttaatctacatgcattatcaatagtacacttaattttttattgaaaccatcagttgtttgttataaaactgaaagaaaaaa--ccctaatttttcatgtttatgcaaatgttattcctagagcttctcctcgcttcctgcaggtcagaatttccatctgttgttgtctttcttcagcct-aaagaatttccgtttgcgtttcttgtatttaggtctgctaacaacaaacgtttgaagctttcttttctctgaataaatctttattttctcaagaactgcgttttctagttatagaatttggagctgacaggtattgtttttcattttgaagatgtagtttcattgctttttaaactttgtcatttctgatgacaggtcatctgtctatttgtttccatgcatgtaaattattttctctatccctttagctgctttcaagatttactcttttttt--gcccagtggtttgaccatggcatgtctgcatttggttctctttatttttattctgttcttcgagtttcttgaatctgtaagttgatatatgttgataattaggaaaactgttggtctttactttttcaaatagctttttctgtctcattttctccttctctactctttctaggactccaattatgttagttctagactggtcctatatttattat i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28776157 1890 - 39895921 I e rheMac3.chr2 131816 1098 + 192599291 I e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=47390.000000 s hg38.chrUn_GL000218v1 135090 30 + 161147 ttttct-cctttgtatt---agctgtattgggaa s panTro4.chr3 77210518 34 + 202329955 ttttcttcctctgtatttttaactgtattgggaa i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 133298 34 - 139590 ttttcttcctctgtattcttaactgtattgggaa i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr2 155505 34 - 192460366 ttttcttcctctgtattcttaactgtattgggaa i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101889 34 + 187378091 ttttcttcctctgtattcTTAACTGTATTGGGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 50027 34 - 101219884 ttttcttcctctgtattcttaactgtattgggaa i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28778047 30 - 39895921 -ttttttcctctgtattcttcatt---ttgaaaa i canFam3.chr31 I 1890 C 0 e rheMac3.chr2 131816 1098 + 192599291 I e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=454412.000000 s hg38.chrUn_GL000218v1 135120 234 + 161147 --attgttcttgatctgtttttaagtgcactgatagttttttctgccatctttaatttactggtatgtgcataaaatgacacttttatataagacactctgtctctcagttctaaaatttgt-cctattatctctttatcatttttacttctctgttgagattctccatatattccctcttatgaccatctattccttaaatccttgaatatgcttataatagc-------------------------------------ttattttaaattt s panTro4.chr3 77210552 234 + 202329955 --attgttcttgatctgtttttaagtgcactgatagttttttctgccatctttaatttactggtatatgcatacaatgacatttttatataagatattctgtctctcagttctaaaatttgt-cctattatttgtttatcacttttacttctctgttgagattctccatatattccctcttatgatcatctattccttaaatccttgaatatgcttataatagc-------------------------------------ttattttacattt i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 133332 235 - 139590 --attattcttgatctgtttttaagtgcaccaatagttttttctgccatctttaatttactggtatgtgcatacaatgacatttttacataagatattctgtcccttagttctaaaatttgt-cctattatttctttatcatttttacttctctgttgagattctccatatattcccttttatagccatctattccttaaatctttgaatatgcttacaatagc------------------------------------ttttttttaaattt i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 132914 234 + 192599291 --attgttcttgatctgtttttaagtgtactgatagttttttctgccatctttaatttactggtatgtgcatacaatggcatttttatataagatattctgtccctcagttctaaattttgt-tccattatttctttatagtttttgcttctttgtcaagattctccatatattcactcttatgaccatctatttcttaaatccttgaagatgcttataatagc-------------------------------------ttattttaaattt i rheMac3.chr2 I 1098 C 0 s macFas5.chr2 155539 234 - 192460366 --attgttcttgatctgtttttaagtgtactgatagttttttctgccatctttaatttactggtatgtgcatacaatggcatttttatataagatattctgtccctcagttctaaattttgt-tccattatttctttatagtttttgcttctttgtcaagattctccatatattcactcttatgaccatctatttcttaaatccttgaagatgcttataatagc-------------------------------------ttattttaaattt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 101923 234 + 187378091 --ATTGTTCTTGATCTGTTTTTAAGTGTACTGATAGTTTTTTCTGCCATCTTTAATTTACTGGTATGTGCATACAATGGCATTTTTATATAAGATATTCTGTCCCTCAGTTCTAAATTTTGT-TCCattatttctttatagtttttgcttctttgtcaagATTCTCCATATATTCACTCTTATGACCATCTATTTCTTAAATCCTTGAAGATGCTTATAAtagc-------------------------------------ttattttaaattt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 50061 233 - 101219884 --attgttcttgatctgtttttaagtgtactgatagttttttctgccatctttaatttgctggtatgtgcatacaatggcatttttatataagatattctgtccctcagttctaaattttgt-tccattatttctttgtag-ttttgcttctttgtcaagattctccatgtattcactcttatgaccatctatttcttaaatccttgaagatgcttataatagc-------------------------------------ttattttaaattt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28778077 262 - 39895921 aaaatgttctttatc----ttcagatttattgatacttttttctatcacat--------ctggtaagcctatctagtaaatttttcatattaaatattatattcatcagtgctagcatttctatttccttttttcttgttgtttttattcccttgttgaaattccccatatattcacatgtatgaccatctatttctttaattcttgagtttacttatactagctaacatacaatccttgcctTCtttattttattttattttattttattttt i canFam3.chr31 C 0 I 171 e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1394825.000000 s hg38.chrUn_GL000218v1 135354 699 + 161147 cttatcttctaattccagcatgtgggccatttcaatgtcttaatccattgtttactttttttgttatgtgtcatattttcctg-------gttctatgtctaggcaggttaaattatatgttagattatgtgtatgatattttgtagaga---taggctcttttattttcctttgaagagtgACTCTT-TTCTAACATTAGTCTTTTTTCTGTAGTCAAACACCAAACTTTC------------------------------------------------------------ACTCCTGA-----------------------------------GCTATATGCAATGGTTGAAATCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCTGCTAGATTCTATGGAGTCTCTTTTTATGAATGTGAAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGCTGATTTTAGATTTTTAC--TCTGTGACATTCTCCTCTGTGACTTTC----AGTTGTGTGAGATGTCCTCCCATGTCATTCAAATTTCCCAGTTCTTCTTTTCTGTCAGCCTGGAACTCTGTACTCTTATTCCTCAAGCTAGTA-AAACTCACCGCTTTACTCTTAGACATCTAATTTTGCACAGACTGGGAAGTGTCATCAGGTGTGAAGTTACATTGATGCAAATTTAAATCATTGCAATTTTCTTTATTCAATGGTCAAATACTTCATCAGTGGTTGAATATTCTACTATTTCTGCCTGTTTTCTGTTTCTCATTACCATCAA--ATGTGTATTTA-ATTTTTTTT--- s panTro4.chr3 77210786 698 + 202329955 cttatcttctaatcccagcatgtggaccatttcaatgtcttaatccattgtttactttttttcttatgcgtcatattttcctg-------gttctatgtctaggcaggttaaattatatgttagattatgtggatgatattttgtagaga---taggttcttttattttcctttgaagactgACTCTT-TTCTAACATTAGTCTTCTTTCTGTAGTCAAACACCAAACTTTC------------------------------------------------------------ACTCCTGA-----------------------------------GCTATGTGCAATGGTTGAAATCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCTGCTGGATTCTATGGAGTCTCTTTTTATGAATGTGAAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGCTGATTTTAGATTTTTAC--TCTGTGACATTCTCCTCTGTGACTTTC----AGTTGTGTGAGATTTCCTCCCATGTCACACAGATTTCCCAGTTCTTCTTTTCTGTCAGCCTGGAACTCTGTGCTCTTAT-CCTCAAGCTAGTA-AAACTCATCGCTTTACTCGTAGACATCTAATTTTGCACAGACCAGGGAGTGTCATCAGGTGTGAAGTTGCATTGATGCAAATTTAAATCATTGCAATTTTCTTTATTCAATGGTCAAATACTTCATCAGTGGTTGAATATTCTGGTATTTCTGCCTGTTTTCTGTTTCTCATTACCATCAA--ATGTGCATTTA-ATTTTTTTT--- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 133567 699 - 139590 cttatcttctaatcccagcatgtgggccatttcaatgtcttaatccgttgtttactttttttcttatgcaatatattttcctg-------attctatgtctgggcaggttaaattatttgttagattatgtggatgatattttgtaggga---taggttcttttattttcctttgaagagtgACTCCT-GTCTAACATTAGTCTTCTTTCTGTAGTCAAACACCAAACTTTC------------------------------------------------------------ACTCCTGA-----------------------------------GCTATATGCAATGGTTGAAACCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCTGCTGGATTCTATGGAGTCTCTTTTTATGAATGTGAAATGTAGCAGCCATTATATAGCTGAATGAAGTTTAAGTGCTGATTTTAGATTTTTAC--TATGTGACATTCTCCTCTGTGACTTCT----ACTTGTGTGAGATTTCCTCCCATGCCACTCAAATTTCCCAGTTCTTCTTTTCTGTCAGCCTGTAACTCTGTGCTGTTGTTCCTCAAACTAGTA-AAACTCACAACTTTACTCATAGACATCCAATTTTGCACAGACCAGGGAGTGTCATCAGATGTGAAGTTGCATTGATGTAAATTTAAATCATTGCGATTTTCTTTATTCAGTGGTTAAATACTTCATCAGTGGTTGAATATTCTACTATTTCTGCCTGTTTTCTGTTTCTCATTACCATCAA--ATGTGTATTTA-GTTGTTTTT--- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 133148 696 + 192599291 cttatcttctaatcccagcatgtgggctatttcaatgtcttaatccattgtttac-ttttttcttataaattatattttcctg-------gttctatgtctaggcatgttaaattatatgttagattatgtggatgatattttgtagaga---taggttcttttattttcctttgaagagtgACTCTG-TTCTAACATTAGTCTTCTTTCTGTAGTCAAACACCAAATTTCC------------------------------------------------------------ACTCCTGA-----------------------------------GCTACATGCAGTGGTTGAAATCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCCGCTGGATTCTATGGAGTCTCTTTTTATGAATGTGCAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGCTGATTTTAGATTTTTAC--TCAGTGACAGTCTCCTCTGTGACTTTC----CCTTGTGTGAAATTTCCTCCCATGTCACTCAAATTTCCCAGTTCTTCTTTTGTGTCAGCTTGGAAGTCTGTACTCTTATTCCTCAAACCAGTA-AAACTCACCGCTTTACTTGTAGACATCCAATTTTGCACAGCCCGGGGAGTGTCATCAGGTGTAAAGTTGCATTAATGCAAATTTAAATCATTGCAATTTTCTTTATTCAATGGTCAAATACTTCATCAGTGGTTGAATATTCTACTATTTCTTCCTATTTTCTGTTTCTCATTACCATCAA--ATATATACATA---TATTTTT--- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 155773 696 - 192460366 cttatcttctaatcccagcatgtgggctatttcaatgtcttaatccattgtttac-ttttttcttataaattatattttccta-------gttctatgtctaggcatgttaaattatatgttagattatgtggatgatattttgtagaga---taggttcttttattttcctttgaagagtgACTCTG-TTCTAACATTAGTCTTCTTTCTGTAGTCAAACACCAAATTTCC------------------------------------------------------------ACTCCTGA-----------------------------------GCTACATGCAGTGGTTGAAATCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCCGCTGGATTCTATGGAGTCTCTTTTTATGAATGTGCAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGCTGATTTTAGATTTTTAC--TCAGTGACAGTCTCCTCTGTGACTTTC----CCTTGTGTGAAATTTCCTCCCATGTCACTCAAATTTCCCAGTTCTTCTTTTGTGTCAGCTTGGAAGTCTGTACTCTTATTCCTCAAACCAGTA-AAACTCACCGCTTTACTTGTAGACATCCAATTTTGCACAGCCCGGGGAGTGTCATCAGGTGTAAAGTTGCATTAATGCAAATTTAAATCATTGCAATTTTCTTTATTCAATGGTCAAATACTTCATCAGTGGTTGAATATTCTACTATTTCTTCCTATTTTCTGTTTCTCATTACCATCAA--ATATATATATA---TATTTTT--- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102157 698 + 187378091 cttatcttCTAATCCCAGCATGTGGGCTATTTCAATGTCTTAATccattgtttactttttttcttatggaTCATATTTTCCTG-------GTTCTATGTCTAGGCATGTTAAATTATATGTTAGATTATGTGGatgatattttgtagaga---taggttcctttattttcctttgaagagTGACTCTGTTTCTAATATTAGTCTTCTTTCTGTAGTCAAACACCAAATTTCC------------------------------------------------------------ACTCCTGA-----------------------------------GCTACATGCAGTGGTTGAAATCTCTGCTCTGTACTAGCAATTTAGCTGTTGTTTTCCACTGGATTCTATGGAGTCTCTTTTTATGAATGTGCAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGctgattttagatttttac--tCAGTGACAGTCTCCTCTGTGACTTTC----CCTTGTGTGAGATTTCCTCCCATGTCACTCAAATTTCCCAGTTCTTCTTTTGTGTCAGCTTGGAAGTCTGTACTCTTATTCCTCAAACCAGTA-AAACTCACTGCTTTACTTGTAGACATCCAATTTTGCACAGACCGGGGAGTGTCATCAGGTGTAAAGTTGCATTAATGCAAATTTAAATCATtgcaattttctttattcagtggTCAAATACTTCATCAGTGGTTGAATATTCTactatttcttcctattttctgtttcttattaccatcaa--atatatatata---tattttt--- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 50294 700 - 101219884 cttatcttctaatcccagcacgtgggctatttcaatgtcttaatccattgtttactttttttcttatggatcatattttcctg-------gttctatgtctaggcatgttaaattatatgttagattatgtggatgatattttgtagaga---taggttcctttattttcctttgaagagtgACTCTGTTTCTAATATTAGTCTTCTTTCTGTAGTCAAACACCAAATTTCC------------------------------------------------------------ACTCCTGA-----------------------------------GCTACATGCCGTGGTTGAAATCTCTGCTCTGTACTAGCAGTTTAGCTGTTGTTTTCCACTGGATTCTATGGAGTCTCTTTTTATGAATGTACAATGTAGCAGCCATCATATATCTGAATGAAGTTTAAGTGCTGATTTTAGATTTCTAC--TCAGTGACAGTCTCCTCTGTGACTTTC----CCTTGTGTGAGATTTCCTCCCGTGTCACTCAGATTTCCCAGTTCTTCTTTTGTGTCAGCGTGGAAGTCTGTACTCTTATTCCTCAAACCAGTA-AAACTCACCACTTTACTTGTAGACATCCAATTTTGCACAGACCGGGGAGTGTCATCAGGTGTAAAGTTGCATTAACGCAAATTTAAATCATTGCAATTTTCTTTATTCAATGGTCAAATACTTCATCAGTGGTTGAATATTCTACTATTTCTTCCTATTTTCTGTTTCTCATTACCATCACATATATATATATA---TATTTTT--- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28778510 797 - 39895921 cttgccttctaattcccaaat-taggccacctcaacgtgtctttccattgtctac-ttttttcctatgtgttatattttcctgtatttttttttaatgcatagctgtttttaattatatactggatt-tggggctgatatattgtagagactctgagtcctgttatttttctttgaggagtgacttt--ttctagtattactcatctatctgtactcaaacaccaaactTCTCACTTCATGTGAGATGGAATGGAATTTGTTTGAATTAGTGAGatttaaaaaattattttaaatCCTGATTATAAAAATCATAGTAACTCATTGTAGTAACAGTGCTGAATG--GTGGATGAAATCTATGCTCTATGCCTGTCCCtcagatattgctttctgctgggatctatggagtatc-ctcaatgcatgtgcaacttaatagtcaccgta-atctggatggagtttatatgaatatttcagatcttcaccatctgtgacattttcttctatgactttcacttacttgtatgggattctctcccactccactca-atttcccagttcttctgttttgttagcttggaactctgtgctcatactcctcacactggaataaaattgctgctccagttgtagccatccagttcttca-agact--gcagtgtcatcaggtagaaagctgcagtaaagcacactt-aatcagagcagttatcttcctttgatggtcaagtattcagtcattggatgaatattctgat-tttctgcctattt----ttcccccataacatcaa--atatgtgtgtattttatttttatt i canFam3.chr31 I 171 I 221 e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=3182073.000000 s hg38.chrUn_GL000218v1 136053 1525 + 161147 AGAGTTAATAGTTTTTT-CCCTGCATTTGAGTTAGACC----TGAGCTACTACCACATT-TTGTAATTCAAACTTTTTGTCTAACAATGTTTTAAAA-AACTCTTTAT-TTGGAGGGAATTCTCAAATTTCTAAATACTCTACAAACATTAGGATCAGGGctcacattcccagtttcccttgtagccagatgtgcatatggaacatggcctcagctaatgaagcatacccacATATTTGAAAGTAAGAAAAGTGTTAAGAGGAAC----TGTAGATATCATTTTAGTTGATGTAAGGATGGAAAATAAA--TAACCAACTTTCACTGGTGGACTTTGTCTTCAATCATTGTTTTCCCGTGGGTAAGTGGCTAATTTTCTGGCCTAGAGGTGAAATTGGTGTGTTGGTAAGAATTGATT-TAATGATA---------ACCTGCTTTTGTCTTTTTAAAAATTGTTAATCCACCATTGTTTCTGGTCCTGTTTTATACTTATGCAGTGTATAATCTCTCATGCAAAATTTAGTT------CTTTGTTTCTCAGCTTAAACTGGATTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCCTTGGTTGATGTTAGACAAAAGTAACAA----GAAGGAATTAAAGAAATTTGTTTGTCATCTTG-TAACATTAAATAAATGAAACT--GAAAATTCAACAATTCTGCTTCATAAAAAAGTAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAATGAAATTTCTGCCTCATGGAAGGTTTTTAGAACTATGTAA----TAATACCATACAGACCATTAGGAGAGAAATGAATA-AAGACTGAAAGAAGTAAGCACTGTGTGGTAACATAGATGGTGCACAGTTGTGTGCGTGGAGCCCTAATACATTTGACCATGGAATTTATACAATAAATGTCAGTTTCCTGTGAACCTGATAATTTATATGACTTTCGCAGACCTTTCCTTAACCTAAACTGTTTAGGTTTCCTGTCGACAGACTGCATGTATTCTCACCTTTAACCTTTCCATAATCTTCCCTAATTACAGATGTCATTGATTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAAGTTATATT-------------ATTTGTTTTTT---ACTAATATGTGAAGTGATTTTGTCTTTCATTTCACCTCTAGAGCTAATTATGTCTTCTAGGTTAACAAAAATTCCAGATCATACCATCATTAGTTTAAACTTTACAATG-AAATCATTATTTCCATTTATTACTAGCCTGCATTATAGCAATGTTTAGCTAATGAATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACCTCAAGTAAATGGTGTAATTAATTTATTTATCAGAATTTTAAATTAAGTGTTCTGTTTAATCTCAAAGGGGTACCAATGAAGTCAGGGCATAAGGACTCTGTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTACATTTTT-CCTCATACTATGATGGCTATAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAGGCTA-CTAGTGTCTATTTCATTC s panTro4.chr3 77211484 1523 + 202329955 AGAGTTTATAGTTTTTTTCCCTGCATTTGAGTTAGACA----TGAGCTACCACCACATT-TTGTAATTCAAACTTTTTGTCTAACAGTGTTTTAAAA-AACTCTTTAT-TTGGAGGGAATTCTCAAATTTCTAAATACTCTACAAACATTAGGATCAGGGCTCACATTCCCAGTTTCCCTTGTAGCCAGATGTGCATATGAAACATGGCCTCAGCTAATTAAGCATACCCACATATTTGAAAGTAAGAAAAGTGTTAAGAGGAAC----TGTAGATGTCATTTTAGTTGATGCAAGGGTGGAAAAAAAA-ATAACCAACTTTCACTGGTGAACTTTGTCTTCAATCATTGTTTTCCTGAGGGTAAGTGGCTAATTTTCTGGCCTAGAGGTGGAATTGGTGTGTTGGTAACAATTGATT-TGATGATA---------ACCTGCTTTTGTCTTTTTAAAAATTGCTAATCCACTGTTGTCTCTGGTCCTGTTTTATACTTATGCAGTGTATAATTTCTCGTGCAAAATTTGGTT----------GTTTCTCAGCTTAAACTGGATTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCTTTGGTTGATGTTAGACAAAAATAACAA----GAGGGAATTAAAGAAATATATTTGTCATCTTG-TAACATTACATAAATGAAACTTTGAAAATTCAACAATTCTGCTTCATAAAAAAATAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAATGACATTTCTGCCTCATAGAAGATTTTTAGAACTATGTAA----TAA---CATACTGACCATTAGGAGAGAAATGAATA-AAGACGGACAGAAGTAAGCACTGTGTGGTAACGTAGATGGTGCACAGTTGTGTGCATGGAGCCCTAATACATTTGACCATGGAATTTATACAATAAATGTTAGTTTCCTGTGAACCTGCTAATTAATATGACTTTCGCAGACATTTCATTAACCTAAACAGTTTAGGTTTCCTGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGATGTCATTGGTTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAAGTTATATT-------------ATTTGTTTTTT---ACTAATATGTGAAGTGATTTTGTCTTTCATTTCACCTCTAGAGCTAATTATGTATTCTAGGTTAACAAAAATTCCAGATTATACCATCATTAATTTAAACTTTACAATG-AACTCATTATTTCCATTTATTACTAGCCTGCATTATAGCAATATTTAGCTAATGAATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACCTCAAGTAAAAGGTGTAATTAATTTATTTATCAGAATTTTAAATTAAGTGTTCTGTTTAATCTGAAAGGGGTACCAATGAAGTTAGGGCGTAAGGACCCTGTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTACATTTTTTCCTCATACTATGATGGCTATAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAGGCTG-CTAGTGTCTATTTTATTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 134266 1522 - 139590 AGAGTTTATAGTTTTTCTCCCTGCGTTTGTGTTAGACA----TGAGCTACTACCACATT-TTGTAACTCAAACTTTTTGTCTAACGATGTTTTAAAA-AACTCTTTAT-TTGGAGGGAATTCTCAAATTTATAAATACTCTACAAACATTAGGATCAGGGCTCAAATTCCCAGTTTCTCTTGTAGCCAGATGTGCATATGAAACATGGCCTCAGCTAATTAAGCATGCCCACATATTTGACAGTAAGAAAAGTGTTAAGAGGAAC----TGTAGATATCATTTTAGTTGATGCAAGGACGGAAAAAAAA--TAACCAACATTCACTGGTGAACTTTGTCTTCAATTATTGTTTTCTTGTGGGTAAGTGGCTAATTTTCTGGCCTAGAGGTGGAATTAGTGTATTGGTAACAATTGATT-TGATGATA---------ACCTGCTTTTGTCTTTTTAAAAATTGCCAATCCACCATTGTTTCTGGTCCTGTTTTATGCTTATGCACTGTATAATCTCTCATGCAAAATTTAGTT------CTTTGTTTCTCAGCTTAAACTGGATTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCTTCGGTTGATGTTAGACAAAAATAACAAC---GAGGGAATTAAAGAAATACGTTTGTCATCTTG-TGGCATGACAGAAATGAAACTTTGAAAATTCAACAATTCTGCTTCATAAAAAAATAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAATGAAATTTCTGCCTCATGAAAGATTTTTTAAACTATGTAA----TAATAGCATACAGACCATAAGGAGAGAAATGAATA-AAGATGGAAAGAAGTAAGCACTGTGTGGTAACATAGATGGCACACAGTTGTGTGCATGGAGCCCTAATACATTTTACCATGGAATTTATACAATAAATGTTAATTTCCTGTGAACCTGCTAATTAATATGACTTCTGCAGACATTTTATTAACCTAAACAGTTTAGGTTTCCTGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGATGTCA-------TTAATAGTAAAAGAACAGCAGTAGCTTATAAAGTTATATT-------------ATTTGTTTTTT---ACTAATACGTTAAGTGATTTTGTCTTTCATTTCACCTCTACAGCTAATTATATATTGTAGCTTAACAAAAACTCCAGATCATACCATCATTAGTTTAAACTTTATGATG-AAGTCAATATTTCCATTTATTACTAGCCTGCATTATAGCAATATTTAGCTAATGAATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACCTCAAGTAAATGGTATAATTAATTTATTTATCAGAATTTTAAATTAAGT-TTCTGTTTAATCTCAAAGGGGTACCAATGAAGTTAGGGCATAATGACTCCGTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTACATTTTTTCCTCATACTATGATGGCTATAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAGGCTG-CTAGTGTCTATTTTATTC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 133844 1534 + 192599291 AGAGTTTATGTTTTTTTCCTCTGCATTTGAGTTAGACA----TGAGCTACTACCACATT-TTGTAATTCAAAC-ATTTGTCTAACAATGTTTAAAAAAAACTCTTTAT-TTGGAGGGAATTCTCAAATTTCTAAATACTCTGCGAACATTAGGATCAGGGCTCAAATTCCCAGGTTCCCTTGTAACCGGATGTGCATATGAAACATGGCCTCAGCTAATTAAGCATACCGACATATTTGAAAGTAAGAAAAGTGTTAAGATGCAC----CGTAGAGATCATTTTAGTGGATGTGAGGATGGAAAAAAAAAATAACCAGCTTTCACTGGTGAACTTTATCTTCA---GTTGTTTTCCTGTAGATAAGTGGCTAATTTACTGGCGTAGAGGTGGAATTGGTGTGTTGGTAACAATTGATT-TGATGATA---------ATGTGCTTTTGTCTTTTTAAAAATTGCTAATCCACCATTGTTTCTGGTCCTGTTTTATACTTATGCAGTGTATAACCTCTCATGTAAAATTTAGTTCT--TCCTTTGTTTCTCAGCTTAAACTGGCTTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCTTTGGTTGATGTTAGAGCAAAATAACAAC-AAGAGGCTATTAAAGAAATAAGTTTGTCATCTTG-TAACATTACATAAATAAAACTTTGAAAATTCAACAATTCTGTTTTATAACAAAATAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAGTGAAATTTCTGCCTCATGGAAGATTTTTAGAACTATGTAA----TAATAACATACAGATCATTAGGAGAGAAATGAATA-AAGACTGAAAGAAGTAAGCACTGTGTGGTAATGTAGATGGTGCACAGTTGTGTGCATGGAGCTCTAATACATTTTACCATGGAATTTATACAATAAATGTTAGTTTCCTGTGAACCTGCTAATTAATATGACTTTCACAGACATTTCATTAACCTAAACAGTTTAGGTTTCCAGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGACGTCATTGCTTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAAGTTATATT-------------ATTTGTTTTTT---ACTAATATGTGAAGTGATTTTGTCTTTCATTTCACCTCTAGAGCTAATTATGTATTCTAGGTTAACAAAAATTCCAGATCACACCATCATTAGTTTAAACTTTACAATG-AACTCATTATTTCCATTTATTACTAGCCTGCATTATAGCAATATTTAGCTAATGGATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACTTCAAGTAAATGGTGTAATTAATTTATTTATCAGAATTTTAAATTAAGTGTTCTTTTTAATCTCAAAGGGATACCAGTGAAGTTAGGGTGTAAGGACTCCCTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTATATTTTT-CCTCATAATATGATGGCTCTAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAAGCTG-CTAGTGTCTATTTTATTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 156469 1535 - 192460366 AGAGTTTATGTTTTTTTCCTCTGCATTTGAGTTAGACA----TGAGCTACTACCACATT-TTGTAATTCAAACTTTTTGTCTAACAATGTTTAAAAAAAACTCTTTAT-TTGGAGGGAATTCTCAAATTTCTAAATACTCTGCGAACATTAGGATCAGGGCTCAAATTCCCAGGTTTCCTTGTAACCGGATGTGCATATGAAACATGGCCTCAGCTAATTAAGCATACCGACATATTTGAAAGTAAGAAAAGTGTTAAGATGCAC----CGTAGAGATCATTTTAGTGGATGTGAGGATGGAAAAAAAAAATAACCAGCTTTCACTGGTGAACTTTATCTTCA---GTTGTTTTCCTGTAGATAAGTGGCTAATTTTCTGGCGTAGAGGTGGAATTGGTGTGTTGGTAACAATTGATT-TGATGATA---------ACGTGCTTTTGTCTTTTTAAAAATTGCTAATCCACCATTGTTTCTGGTCCTGTTTTATACTTATGCAGTGTATAACCTGTCATGTAAAATTTAGTTCT--TCCTTTGTTTCTCAGCTTAAACTGGCTTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCTTTGGTTGATGTTAGAGCAAAATAACAAC-AAGAGGCTATTAAAGAAATAAGTTTGTCATCTTG-TAACATTACATAAATAAAACTTTGAAAATTCAACAATTCTGTTTTATAACAAAATAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAGTGAAATTTCTGCCTCATGGAAGATTTTTAGAACTATGTAA----TAATAACATACAGATCATTAGGAGAGAAATGAATA-AAGACTGAAAGAAGTAAGCACTGTGTGGTAATGTAGATGGTGCACAGTTGTGTGCATGGAGCTCTAATACATTTTACCATGGAATTTATACAATAAATGTTAGTTTCCTGTGAACCTGCTAATTAATATGACTTTCACAGACATTTCATTAACCTAAACAGTTTAGGTTTCCAGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGACGTCATTGCTTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAAGTTATATT-------------ATTTGTTTTTT---ACTAATATGTGAAGTGATTTTGTCTTTCATTTCACCTCTAGAGCTAATTATGTATTCTAGGTTAACAAAAATTCCAGATCACACCATCATTAGTTTAAACTTTACAATG-AACTCATTATTTCCATTTATTACTAGCCTGCATTATAGCAATATTTAGCTAATGGATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACTTCAAGTAAATGGTGTAATTAATTTATTTATCAGAATTTTAAATTAAGTGTTCTTTTTAATCTCAAAGGGATACCAGTGAAGTTAGGGTGTAAGGACTCCCTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTATATTTTT-CCTCATAATATGATGGCTATAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAAGCTG-CTAGTGTCTATTTTATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 102855 1535 + 187378091 agagtttatgtttttttcctctgcatTTGAGTTAGACA----TGAGCTACTACCACATT-TTGTAATTCAAACTTTTTGTctaacaatgtttaaaaataactctttat-TTGGAGGGAATTCTCAAATTTCTAAATACTCTGTGAACATTAGGATCAGGGCTCAAATTCCCAGTTTCCCTTGTAGCCGGATATGCATATGAAACATGGCCTCGGCTAATTAAGCATACCGACATATTTGAAAGTAAGAAAAGTGTTAAGATGCAC----TGTAGAGATCATTTTAGTGGATgtaaggatggaaaaaaaaaataaccagctTTCAATGGTGAACTTTATCTTCA---GTTGTTTTCCTGTAGGTAAGTGGCTAATTTTCTGGCGTAGAGGTGGAATTGGTGTGTTGGTAACAATTGATT-TGATGATA---------AcatgcttttgtctttttaaaaattgctaatcCACCATTGTTTCTGGTCCTGTTTTATACTTATGCAGTGTATAACCTCTCATGTAAAATTTAGTTCT--TCCTTTGTTTCTCAGCTTAAACAGGCTTTTGATGAGCA--GTTTTCACcttcaaatgaaagaaatggcttTGGTTGATGTTACAGAAATATAACAAC-AAGAGGCTATTAAAGAAATAAGTTTGTCATCTTG-TAACATTACATAAATTCAACTCTGAAAATTCAACaattctgttttataaaaaaatagaaagtttctactgtttttcattattttcaaagctATATCATTAAGTGAAATTTCTGCCTCATGGAAGATTTTTAGAACTATGTGA----TAATAACATACAGATCATTAGGAGAGAAATGAATA-AAGACTGAAAGAAGTAAGCACTGTGTGGTAATGTAGATGGTACACAGTTGTGTGCATGGAGCCCTAATACATTTTACCATGGAATTTatacaataaatgttagtttcctgTGAACCTGCTAATTAGTATGACTTTCACAGACATTTCATTAACCTAAACAGTTTAGGTTTCCAGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGATGTCATTGCTTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAagttatatt-------------atttgtttttt---actaatATGTGAAGtgattttgtctttcatttcacCTCTAGAGCTAATTATGTATTCTAGGTTAACAAAAATTCCAGATCACACCATCATTAGTTTAAACTTTACAATG-AactcattatttccatttattactAGCCTGCATTATAGCAATATTTAGCTAATggattctcaaaatatttcttgaaaggtGAAAGAGTACTTCAAGTAAATGgtgtaattaatttatttatcagaattttaaattaaGTGTTCTTTTTAATCTCAAAGGGATACCAGTGAAGTTAGGGTGTAAGGTCTCCCTGGTTAATAAAATGGCAAGAATTTAAaaggattattatattttt-cctcataatatgatggctataattttttaaaacagtagaaatgtttaatttttaaaagctg-ctaGTGTCTATTTTATTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 50994 1536 - 101219884 AGAGTTTATGTTTTTTTCCTCTGCATTTGAGTTAGACA----TGAGCTACTACCATATT-TTGTAATTCAAACTTTTTGTCTAACAATGTTTTAAAAAAACTCTTTAT-TTGGAAGGAATTCTCAAATTTCTAAATACTCTGCGAACATTAGGATCAGGGCTCAAATTCCCAGTTTCCCTTGTAGCCGGATGTGCATATGAAACATGGTCTCAGCTAATTAAGCATACCGACATATTTGAAAGTAAGAAAAGTGTTAAGATGCAC----CGTAGAGATCATTTTAGTGGATGTGAGGATGG---AAAAAAATAACCAGCTTTCGCTGGTGAACTTTGTCTTCA---GGTGTTTTCCTGTAGGTAAGTGGCTAATTTTCTGGCGTAGAGGTGGAATTGGTGTGTTGGTAACAATTGATT-TGATGATA---------ACGTGCTTTTGTCTTTTTAAAAATTGCTGATCCACCATTGTTTCTGGTCCTGTTTTATACTTATGCAGTGTATAACCTCTCATGTAAAATTTAGTTCT--TCCTTTGTTTCTCAGCTTAAACTGGCTTTTGATGAGCA--GTTTTCACCTTCAAATGAAAGAAATGGCTTTAGTTGATGTTACAGAAAAATAACAAC-AAGAGGCTATTAAAGAAATAAGTTTGTCATCTTG-TAACATTACATAAATAAAACTCTGAAAATTCAACAATTCTGTTTTATAAAAAAATAGAAAGTTTCTACTGTTTTTCATTATTTTCAAAGCTATATCATTAAGTGAAATTTCTGCCTCATGGAAGATTTTTAGAACTATGTAATACTTAATATCATACAGATCATTAGGAGAGAAATGAATA-AAGACTGAAAGAAGTAAGCACTGTGTGGTAATGTAGATCGTGCACAGTTGTATGCATGGAGCCCTAATACATTTTACCATGGAATTTATACAATAAATGTTAGTTTCCTGTGAACCTGCTAATTAATATGACTTTCACAGACATTTCATTAACCTAAACAGTTTAGGTTTCCAGTAGATAGACTGCATGTATTCTCATCTTTAACCTTTCCATAATGTTCCCTAATTACAGATGTCATTGCTTCTTAATAGCAAAAGAACAGCAGTAGCTTATAAAGTTGTATT-------------ATTTGTTTTTT---ACTAATATGTGAAGTGATTTTGTCTTTCATTTCACCTCTAGAGCTAATTATGTATTCTAGGTTAACAAAAATTCCAGATCACACCATCATTAGTTTAAACTTTACAATG-AACTCATTATTTCCATTTATTACTAGCCTGCATTATAGCAATATTTAGCTAATGGATTCTCAAAATATTTCTTGAAAGGTGAAAGAGTACTTCAAGTAAATGGTATAATTAATTTATTTATCAGAATTTTAAATTAAGTGTTCTTTTTAATCTCAAAGGGATACCAGTGAAGTTAGGGTGTAAGGACTCCCTGGTTAATAAAATGGCAAGAATTAAAAAGGATTATTATATTTTT-CCTCATAATATGATGGCTATAATTTTTTAAAACAGTAGAAATGTTTAATTTTTAAAAGCTG-CTAGTGTCTATTTTATTC i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28779528 1526 - 39895921 AGAGTTTATAATTTTTC-CTCTGCATTTGGGTTAGTCAGATGTGAGCTGCTAGCACATCATTGTAATGTAAActttctgtctctcatcttttgaaaa-acctctctctatttaagaaatttcccaagctgtgaattcctctgtaaa-at--gaagcaaggctcaaatcctctatttcctttgtaggcagatgtgcacttgaatcttaggttcagctaatcagacatactcatgcATTTGAAAGTATGAAAAGTGATAAGAGGCACTCTTTATAGATATCATTTTAATTGATGCAGGCAAGAATAACAA---TAACCAATTTTTACCAGATAATTGTGTCCTCAGTGGTTGTTTTCCTGTGGGTAAGTGGTTAACCTCATGGTATAGAAAGAGAATTGGTGTGGTGGTAAGGCATGATTCTGTTAATATTCTAGTTTGTCTTTTTTTTTTTTTTTA-----TGTTGATTCCCCTTTTTAC---GTCCTGC----AACCTCTACCTTGTATAATCTCTCCTATACAATTTGATTCTGGCTTTTTGTTTCCTGGCATAAATTGGATTTTTATGGACAACACTCTTACTTTTGAATGAAAGAAAGGGTTTCGGTTGACCTTAGACAGAAATAACAACAAAGAGGAAAATAAGGAGA----TCTGTCATCTTATTATCATTATATTGATGAAACATTTAAAATTCAACAATCCTCTTCT---AAAAAGTAGAAAGTTT---CTGTTTCTCATTATCTTCAAAACAATATCATTAAATATAATTTCTGCCTCATGAAGGATTTCCAGAAATATGCAA-ACTTAATAGCATCCAGATCATTAGGGGGGAAATAGATAGAAGATTGAAAGAGGTAAGCACTGTGCGGTAATCTAGATGGAACACA-CTGTGTGCACGAAGCCTTAATACTTTTTATCATGGCATTTATAAAATAATAGTTAGGTTCCTGTGAACCTGCTAATTAATATGACTGTCATAGGCATTTCATTAACCTAAGCAGTTTAGGTTTCCTGTAGATAGACCACATGTATCCTCATCTTTAACCTTTCCATAATGTTTCCTAATTACAGGTTTCATTGATTCTTAATAGCAATGGGACAATAGTGGTTTATAAAGTTATGTTCTAATTTTTTTACACTTTTTTTTTTACACTAATGAGTAAAGCAATTTTGCCTTTCATTTCCCCTCTAGAGCTAATTATGCATTCTAGGTTAACAAAAATTCCTGATCATGCTACCATTGGCTTAAACTTTATAATGAAACTCATTATTTCCATTTATTACTAGACTGCATTACAGTGATATGTGGCTAATGAGTTGTCAAAATGTTTTTTGAGAGGTTAAAGGATACTTCAAATAAATGTCAACATTAATTTATCT----GAATTTTTAA-AAAGTTTTCTTTTTTACCCTCAAAGGATACTAATGAAGTTAGGATATGAGTTCTCTCTGGTTAATAAAACTGCAAAAGTTAAAATGGACTATTTCAACTTT-------------------------TTCTGAAACAGTGAACATGTTTAATTTTTAAAGGCCATCTTGTGTCTGTTTTATTC i canFam3.chr31 I 221 C 0 e tupBel1.scaffold_74138.1-5263 4044 17538 + 5263 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=207682.000000 s hg38.chrUn_GL000218v1 137578 106 + 161147 AAAGATGTGAAC-TCTTCAGTTCAACTTGTTGTTTGAAATTTGAACAGCTTTTTCTTGCTCTTGTTCAATACAGTTATTTAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCGGAGTTA s panTro4.chr3 77213007 106 + 202329955 AAAGATGTGAGC-TCTTCAGTTCAACTTGTTGTTTGAAATTTGAACAGCTTTTTCTTGCTCTTGTTCAATACAGTTATTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCGGAGTTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135788 103 - 139590 AAAGATGTGAGC-TCTTCAGTTCAAC---TTGTTTGAAGTTTGAACAGCTTTTTCTTGCTCTTGTTCAATACAGTTGTTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCTAGAGTTC i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135378 105 + 192599291 AAAGTTGTGAAC-TCTTCAGTTCAACTTGTTGTTTGAAATTTGAGCAGC-TTTTCTTGCTCTTGTTCAGTACATTTATTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCAGAGTTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158004 105 - 192460366 AAAGTTGTGAAC-TCTTCAGTTCAACTTGTTGTTTTAAATTTGAGCAGC-TTTTCTTGCTCTTGTTCAGTACATTTATTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCAGAGTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104390 102 + 187378091 AAAGTTGTGAAC-TCTTCAGTTCAAC---TTGTTTGAAATTTGAGCAGC-TTTTCTTGCTCTTGTTCAGTACATTTATTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCAGagtta i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52530 102 - 101219884 AAAGTTGTGAAC-TCTTCAGTTCAAC---TTGTTTGAAATTTGAGCAGC-TTTTCTTGCTCTTGTTCAGTACATTTATTAAACAGTCCAGGC------------------------------------------------------------------------AGGCCTCCAGAGTTA i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_136731.1-86001 40732 98 - 86001 AAAGGGGCAAACTTCCTCAGTTAACCTTTTTGTTT-AAATTTGAGCAGT-TTTTCT---TTTTGTTTAAATTAGTTGCCAAAGAGTC----C------------------------------------------------------------------------AGGCCTCCAGAGCTA i tupBel1.scaffold_136731.1-86001 I 17538 I 4 s canFam3.chr31 28781054 172 - 39895921 AAAGGGGTCAGC-TCCTTCATTAAGCTGGTTG-TTGAAATTTGAGCAAC-TTTTCT---TCTT-TTTAATATAGTTACTGACCAGTCCAAGCCTCCAACTTTGCCAAATATATGAAATTATATAAAGAGTAATTTGACAAAATAAAGCAGATGCCTTTCTGTAACAGCCTTTGGACTTA i canFam3.chr31 C 0 C 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=25356.000000 s hg38.chrUn_GL000218v1 137684 20 + 161147 ---CATATA---------------------TGTATGTGGCTATG s panTro4.chr3 77213113 20 + 202329955 ---CATATA---------------------TGCATGTGGCTCTA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135891 20 - 139590 ---Catata---------------------tgtatgtggatatg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135483 20 + 192599291 ---CATATA---------------------TGTATGTGGCTATG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158109 20 - 192460366 ---CATATA---------------------TGTATGTGGCTATG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104492 20 + 187378091 ---catata---------------------tgtatgtggctatg i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52632 20 - 101219884 ---Catata---------------------tgtatgtggctatg i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 307 29 - 5045 ---CATATA-------AAC-----AGTAACTAGACACAGGTATA i micMur1.scaffold_84608 N 0 I 29 s tupBel1.scaffold_136731.1-86001 40834 14 - 86001 ---CATATG---------------------AGTGTATG------ i tupBel1.scaffold_136731.1-86001 I 4 C 0 s canFam3.chr31 28781226 44 - 39895921 TAGCATAAATCCTGTCAACTGGTTAATAATTGCTTTAGCTTATG i canFam3.chr31 C 0 I 3 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=11952.000000 s hg38.chrUn_GL000218v1 137704 4 + 161147 TGTG s panTro4.chr3 77213133 4 + 202329955 TGTG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135911 4 - 139590 tgtg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135503 4 + 192599291 TGTG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158129 4 - 192460366 TGTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104512 4 + 187378091 tgtg i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52652 4 - 101219884 tgtg i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_136731.1-86001 40848 4 - 86001 TCTG i tupBel1.scaffold_136731.1-86001 C 0 C 0 s canFam3.chr31 28781273 4 - 39895921 TGTG i canFam3.chr31 I 3 C 0 e micMur1.scaffold_84608 336 29 - 5045 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=2255.000000 s hg38.chrUn_GL000218v1 137708 2 + 161147 TA- s panTro4.chr3 77213137 2 + 202329955 TA- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135915 2 - 139590 ta- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135507 2 + 192599291 TA- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158133 2 - 192460366 TA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104516 2 + 187378091 ta- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52656 2 - 101219884 ta- i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 365 2 - 5045 CA- i micMur1.scaffold_84608 I 29 I 503 s tupBel1.scaffold_136731.1-86001 40852 2 - 86001 TA- i tupBel1.scaffold_136731.1-86001 C 0 C 0 s canFam3.chr31 28781277 2 - 39895921 -AA i canFam3.chr31 C 0 C 0 e ponAbe2.chr3 42363023 26881 + 202140232 I a score=11025.000000 s hg38.chrUn_GL000218v1 137710 5 + 161147 TATAT s panTro4.chr3 77213139 5 + 202329955 TATAT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135917 5 - 139590 tatat i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135509 5 + 192599291 TATAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158135 5 - 192460366 TATAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104518 5 + 187378091 tgtat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52658 5 - 101219884 tgtat i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_136731.1-86001 40854 5 - 86001 TATGT i tupBel1.scaffold_136731.1-86001 C 0 I 16816 s canFam3.chr31 28781279 4 - 39895921 -ATAA i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 367 503 - 5045 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=194812.000000 s hg38.chrUn_GL000218v1 137715 97 + 161147 ACATAGAAG----------TACAAATAGCATATAA-ACAATTTACATAAGACTTTTGCTTTTGATGAAAATTCTTCTAAAAGTGAATATAAATTAATAGCATATGGAG s panTro4.chr3 77213144 97 + 202329955 ACATAGAAA----------TACAAATAGCATATAA-TCAATTGACATAAGACGTTTGCTTTTGATGAAAATTCTTCTAAAAGTGAATATAAATTAATAGCATATGGAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 135922 97 - 139590 acatagaca----------tataaataGCATAAAA-TCAATTTACATAAGACTTTTGCTTTTGATGAAAATTCTTCTAAAAGTGAATATAAATTAATAGCATATGGAG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135514 107 + 192599291 ACATAGAAGCACTATGCAGTACAAATAGCACATAA-TCAATTTACATAAGACTTTTGCTTTTGATGAAAATTCTTCTAAAAGTAAATATAAATTAATAACATATGGCG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158140 107 - 192460366 ACATAGAAGCACTATGCAGTACAAATAACACATAA-TCAATTTACATAAGACTTTTGCTTTTGATGAAAATTCTTCTAAAAGTAAATATAAATTAATAACATATGGCG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104523 107 + 187378091 acatagaaACACTATGCAGTACAAACAGCATACAA-TCCATTTACATAAGACTTTTGCTTTTGATGAAAATTCttctaaaagtaaatataaattaatagcATATGGCG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52663 107 - 101219884 ACATAGAAGCACTATGCAGTACAAATAGCATATAA-TCAATTTACATAAGACTTTTGCTTTTGATGAAAATTCTTCTAAAAGTAAATATAAATTAATAGCATATGGCA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28781283 107 - 39895921 AAATGAAAGCACTATATAGTTACAATAGCATATAATTTAAATCCTACAAGGCTTTCA-TTTGGCAGAAAATTCCTCTAAAAGTATATATAAATTAAGAGCATATAggg i canFam3.chr31 C 0 I 366 e micMur1.scaffold_84608 367 503 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=114047.000000 s hg38.chrUn_GL000218v1 137812 66 + 161147 CCTACAAA-AATTGTCCAATAGGGAACTAGGAAAAGATAATTTGTGAAGAAAAAGTTTGCTAAAACA s panTro4.chr3 77213241 66 + 202329955 CCTACAAA-AATTGTCTAATAGGCAAGTAGGCAAAGATAATCTGTGAACAAAAAGTTTGCTGAAACA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136019 66 - 139590 CCTACAAA-AATTGTCTGATAGGGAAGTAGTTAAAGATAATCTGTGAACAAAAAGTTTGCCAAAACA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135621 66 + 192599291 CCTACAAA-AATTGTCTAATAGGTAAGCAGGCAAAGATAATCTGTGAACAAAAAGTTTGCTAAAACA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158247 66 - 192460366 CCTACAAA-AATTGTCTAATAGGTAAGCAGGCAAAGATAATCTGTGAACAAAAAGTTTGCTAAAACA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104630 66 + 187378091 CCTACAAA-AATTGTCTAATAGGTAAGCAGGTAAAGATAATCTGCGAACAAAAAGTTTgctaaaaca i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52770 66 - 101219884 CCTACAAA-AATTGTCTAATAGGCAAGCTGGCATAGATAATCTGTGAACAAAAAGTTTGCTAAAACA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28781756 55 - 39895921 CATATAAAGAGTTGTCT-ACAGGTGTATAGACAAAGAC-ATCTGGGAAT-----GTTTGAGA----- i canFam3.chr31 I 366 C 0 e micMur1.scaffold_84608 367 503 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=5317.000000 s hg38.chrUn_GL000218v1 137878 6 + 161147 GAC--TTT s panTro4.chr3 77213307 6 + 202329955 CAC--TTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136085 6 - 139590 GAC--TTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135687 6 + 192599291 TAC--TTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158313 6 - 192460366 TAC--TTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104696 7 + 187378091 tact-ttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52836 6 - 101219884 TAC--TTT i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 870 5 - 5045 ---GATTC i micMur1.scaffold_84608 I 503 I 3868 s canFam3.chr31 28781811 6 - 39895921 TGC--TTT i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=127633.000000 s hg38.chrUn_GL000218v1 137884 66 + 161147 TTATTTTTACATGTAATAACTTTATATTGAAGGGTTTCCAGAAATATAAAATATTATAGGGCACTT s panTro4.chr3 77213313 63 + 202329955 TT---TTTACATGTAATAACTTTATACTGAAGGGTTTCCAGAAATATATAATGTTATAGGGCACTT i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136091 66 - 139590 TTATTTTTACATGTAATAACATTATATTGAAGGGTTTCCAGAAATATATAATGTTATAGGGCACTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135693 62 + 192599291 T----TTTACATGTAATAACTTTATGTTGAAGGATTTCCAGAAATATATAATGTTATAGGGCACTT i rheMac3.chr2 C 0 M 71 s macFas5.chr2 158319 62 - 192460366 T----TTTACATGTAATAACTTTATGTTGAAGGATTTCCAGAAATATATAATGTTATAGGGCACTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104703 62 + 187378091 t----tttacaTGTAATAACTTTATGTTGAAGGGTTTCCagaaatatataatgttatagAGCACTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52842 62 - 101219884 T----TTTACATGTAATAACTTTATGTTGAAGGGTTTCCAGAAATATATAATGTTATAAGGCACTT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28781817 65 - 39895921 -TTTTTCTTTATGTAGTATCTTTATGTTGGAGGGTTTCCAGAAGTACGTCATGCTGTAGGTCACTG i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=84816.000000 s hg38.chrUn_GL000218v1 137950 58 + 161147 ATCCTGAGACACATGAAGGAGACAAGGGATAGAGCTAGGATGGAAGTGAAAATAAAGG s panTro4.chr3 77213376 58 + 202329955 ATCCCAAGACACACGAAGGAGACAAGGGATACAGCTAGGATGGAAGTGAAAATAAAAG i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136157 58 - 139590 ACCCTGAGACACACGAAGCAGACAAGCGATAGAGCTAGGATGGAAGTGAAAATAAAGG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr2 158381 58 - 192460366 ATCCTGAGACACATGAAGGAGACAAGGGATAGAGCTAGGATGGAAGTGAAAATAAAGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104765 58 + 187378091 ATCCTGAGATACATGAAGGAGACAAGCGATAGAGCTAGGATGGAAGTGAAAATAAAGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52904 58 - 101219884 ATCCTGAGACACATAAAGGAGACAAGGGATAGAGCTAGGATGGAAGTGAAAATAAAGG i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28781882 52 - 39895921 ATCATGAGGAACAGGCAAGAGGCAAAGGATGGA------ATAGAGATGAAAATGAGGA i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e rheMac3.chr2 135755 71 + 192599291 M e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=23954.000000 s hg38.chrUn_GL000218v1 138008 11 + 161147 ACAAATAGAGA s panTro4.chr3 77213434 11 + 202329955 ACAAATAGAGA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136215 11 - 139590 ACAAAAAATGA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135826 11 + 192599291 ACAAATAGAGA i rheMac3.chr2 M 71 C 0 s macFas5.chr2 158439 11 - 192460366 ACAAATAGAGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104823 11 + 187378091 ACAAATAGAGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 52962 11 - 101219884 ACAAATAGAGA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28781934 11 - 39895921 ACAAATAGAAA i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=38568.000000 s hg38.chrUn_GL000218v1 138019 20 + 161147 TAGATACTTAAGTGGaaatg s panTro4.chr3 77213445 20 + 202329955 TAGATACTTAAGTGGaaatg i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136226 20 - 139590 TAGATACTTAAGTGGaaatg i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135837 20 + 192599291 TAGATACTTAAGTGGAAATG i rheMac3.chr2 C 0 I 10 s macFas5.chr2 158450 20 - 192460366 TAGATACTTAAGTGGAAATG i macFas5.chr2 C 0 I 5 s papAnu2.chr2 104834 20 + 187378091 TAGATACTTAAGTGGAAatg i papAnu2.chr2 C 0 I 5 s chlSab2.chr22 52973 20 - 101219884 TAGATATTTAAGTGGAAATG i chlSab2.chr22 C 0 I 10 e canFam3.chr31 28781945 0 - 39895921 C e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=58276.000000 s hg38.chrUn_GL000218v1 138039 229 + 161147 aaacactgcatgttctcactcata-ggtgggaattgaacaatgagaacacatgcacacaggaaggggaacatcacacaccagggcctgttgtggggtggggagagggggtagggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcagcacaccaacatggcacatgtatacatatgtaattaaactgcacgttgtgcacatgtgccctaaaac s panTro4.chr3 77213465 229 + 202329955 aaacaccgcatgttctcactcata-ggtgggaattgaacaatgagaacacatggacacaggaaggggaacatcacacactggggactgttgtggggtggggggaggggggagggatagcattaggagatatacctaatgccaaatgacgagttaatgggtgcagcacaccaacatggcgcatgtatacatatgtaactaaactgcacgttgtgcacatgtaccctaaaac i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136246 229 - 139590 aaacaccacatgttctcactcatagggttggaattgaacaatgagaacacatggacacaggaaggggaacatcacacaccagggcctgttgtggggtggggggaagggg-agggatagcattaggagatttacctaatgctaaatgacgagttaatgggtgcggtacaccaacatggcacatgtatacatatgtaactaaactgcacattgtgcacatgtaccctaaaac i nomLeu3.chr21_GL397661_2_random C 0 C 0 e canFam3.chr31 28781945 0 - 39895921 C e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 52993 10 - 101219884 I e papAnu2.chr2 104854 5 + 187378091 I e macFas5.chr2 158470 5 - 192460366 I e rheMac3.chr2 135857 10 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=1323.000000 s hg38.chrUn_GL000218v1 138268 10 + 161147 -ttaaagtata--- s panTro4.chr3 77213694 10 + 202329955 -ttaaagtata--- i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136475 10 - 139590 -ttaaagtata--- i nomLeu3.chr21_GL397661_2_random C 0 C 0 s canFam3.chr31 28781945 14 - 39895921 GTGAAGTTGTTTTT i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 52993 10 - 101219884 I e papAnu2.chr2 104854 5 + 187378091 I e macFas5.chr2 158470 5 - 192460366 I e rheMac3.chr2 135857 10 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=4530.000000 s hg38.chrUn_GL000218v1 138278 5 + 161147 aaaaa s panTro4.chr3 77213704 5 + 202329955 aaaag i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136485 5 - 139590 aaaag i nomLeu3.chr21_GL397661_2_random C 0 C 0 s macFas5.chr2 158475 5 - 192460366 AGAAG i macFas5.chr2 I 5 C 0 s papAnu2.chr2 104859 5 + 187378091 agaag i papAnu2.chr2 I 5 C 0 s canFam3.chr31 28781959 5 - 39895921 ATAAG i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 52993 10 - 101219884 I e rheMac3.chr2 135857 10 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=910159.000000 s hg38.chrUn_GL000218v1 138283 431 + 161147 aaaaTCATCAAACAGGTGGTAATTTCAAAACATGGCTTTTCCAGGCAGCAAATTTTCTGAATGTATCGCAAAAGAAGATAAATTGCATGTCTATGTAGATCATGTCAATGAAATAAACAACAAAG-TTACTTATTGGAATATTGAAAGTGGTTGATAGTAAATAAATTATTTATATTTATGGTAAAAGCAATAAACTTGATTTTTAGGGGGTTCAATGACTTCCTGAAAATATCCTCTCACAGATTTTCTCAGAGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCTATT---TCTGTCAACGTCTACAGAACATTTACAGTTTGATTTCC----------ATTTC-------TACTGACCTTACAAATTTGTAAAGTGAATGCCCACCAGGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGCAAATCTAGGCAAGGAA s panTro4.chr3 77213709 438 + 202329955 aaaaTCATCAAACAGGTGGTAATTTCAAAACATGGCTTTTCCAGGCAGCAAATTTTCTGAATGTATCGCAAAAGAAGATAAATCATGTGTCTATGTAGATCATGCCAATGAAATAATAAA---GG-TTACTTATTAGAATATTGAAAGTGGTTGataataaataaattatttatatttatGGTAAAAGCAATAAACTTGATTTTTAGTGGGTTCAATGACTTCTGGAAAATATCCTCTCACAGATTTTCTCAGAGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCTATT---TCCGTCAACATCTACAGAACATTTACAGTTTGATTTCCGAAAGTTTCCATTTC-------TACTGATCTTACAAATTTGTAAAATGAATGCCCAGCACGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGAAAATCTAGGCAAGGAA i panTro4.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 136490 441 - 139590 -aaaTCATCAAACAGGTGGTAATTTTAAAACATGGCTTTTCCAGGCAGCAAATTTTATGAATGTGTCGTGAAAGAAGGTAAATCATGTGTTTATGTAGATCATGCCAATGAAACAAACAATAAAGTTTACTTATGGGAATATCGAAAGTGGTTGATAATAAATAAATTATTTATATTTATGGTAAAAGCAATAAACTTGATTTTTAGGAGGTTCAATGACTTCCTGAAAATATCCTCTCACAGATTTTCTCAGAGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCTGTT---TCTGTCAATGTCCACAGAACATTTACAGTTCGATTTCCGAAAGTTTCCATTTC-------TACTGATCTTACAAATTTGTCAAATGAATGCCCACCAGGACAAAATATTAAGCGATAAAATAAATTGGATCCTACAAGTGAAAATCTAAGCAAGGAA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 135867 440 + 192599291 AAAATCATCAGACAGGTGGTAATTTTAAAACATGGCTTTTCCAGGCAGCAAATTTTCTGAATGTATCACAAAAGAAGATAAATCATGTGTCTATGTAGATCATGACAATGAAATAAACAATAAAGGTTACTTATTGGAATATTGAAAGTGGTTGATAATAAATAAATTATTTATGTTTATGATAAAAGCCATAAACTTGATTTTTAGGGAGTTCAACGACTTCCTGAAAATATCCTCTCACAGATTTTCTC--AGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCGATT---TCTATCAACGCCTACAGAACATTTACAGTTCCACTTCTGAAAGTTTCCATTTC-------TACTGACCTTACAAATTTGTAAAATGAATGCCCACTAGGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGAAAATCTAGGCAAGAAA i rheMac3.chr2 I 10 C 0 s macFas5.chr2 158480 440 - 192460366 AAAATCATCAGACAGGTGGTAATTTTAAAACATGGCTTTTCCAGGCAGCAAATTTTCTGAATGTATCACAAAAGAAGATAAATCATGTGTCTATGTAGATCATGACAATGAAATAAACAATAAAGGTTACTTATTGGAATATTGAAAGTGGTTGATAATAAATAAATTATTTATATTTATGATAAAAGCCATAAACTTGATTTTTAGGGAGTTCAACGACTTCCTGAAAATATCCTCTCACAGATTTTCTC--AGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCGATT---TCTATCAACGCCTACAGAACATTTACAGTTCCACTTCTGAAAGTTTCCATTTC-------TACTGACCTTACAAATTTGTAAAATGAATGCCCACTAGGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGAAAATCTAGGCAAGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 104864 440 + 187378091 aaaatcatCAGACAGgtggtaattttaaaacatggcttTTCCAGGCAGTAAATTTTCTGAATGTATCACAAAAGAAGATAAATCATGTGTCTACGTAGATCATGCcaatgaaataaacaataaaggTTACTTATTGGAATATTGAAAGTGgttgataataaataaattatttatatttatgataaaAGCCATAAACTTGATTTTTAGGGGGTTCAACGACTTCCTGAAAATATCCTCTCACAGATTTTCTC--AGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCGATT---TCTATCAACGCCTACAGAACATTTACAGTTCCACTTCTGAAAGTTTCCATTTC-------TACTGACCTTACAAATTTGTCAAATGAATGCCCACTAGGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGAAAATCTAGGCAAGAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 53003 440 - 101219884 AAAATCATCAGACAGGTGGTAATTTTAAAACATGGCTTTTCCAGGCAGCAAATTTTCTGAATGTATCACAAAAGAAGATAAATCATGTGTCTATGTAGATCATGCCAATGAAATAAACAATAAAGGTTACTTATTGGAATATTGAAAGTGGTTGATAATAAATAAATTATTTATATTTATGATAAAAGCCATAAACTTGATTTTTAGGGGGTTCAATGACTTCCTGAAAATATCCTCTCACAGATTTTCTC--AGTGTCTAGTTGGCAAAAGCACAGCTCCAAATAGCGATT---TCTATTAACGCCTACAGAACATTTACAGTTCCACTTCTGAAAGTTTCCATTTC-------TACTGACCTTACAAATTTGTAAAATGAATGCCCACTAGGACAAAATATTAAGTGATAAAATTAATTGGATCCTACAAGTGAAAATCTAGGCAAGAAA i chlSab2.chr22 I 10 C 0 s canFam3.chr31 28781964 443 - 39895921 AAAATGGTCATGTGGGAGGTCATTTCAAAACGTGACTTTATCAGGTAGC--GTTTTCTAAATGTATCACATGAGCTGATTGATCACCTGTTTATGTAAGTTATGCCATGGAAATAAGCCATGAAGGCTATGTATTATAGTCTTACAAATGGTTGATAGTGGATGAATTATTTATACTTATGTTAAAAGCAATAATCTTGATTTTTAAGGAGTGTAATGACCTCTTG-AACTATCTTCCAATGGATTTTCTAGGAGTGTCTCACTGGCAAAAGCTCAGCCCCAAATAGCTACTACCTTCATCAAAGTGTA-AGGACATTTACAGTTTCATTTTCAGCA-----CATTTCAGCAAGTTGCCTTCCTTACAAATTTATAAGATGAATACCAATCAGGATAAAATATTAAATGGTAAAATAAATTGGTTCCTACAAGTGAAAAGCTACGCCACTTC i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42363023 26881 + 202140232 I a score=2269064.000000 s hg38.chrUn_GL000218v1 138714 862 + 161147 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCTTGTCCTTCTAGGTAGAGCAACACTCTGGAGACCTTCTTTCGAGGCATTTCACCACCAGAGTAAGTGTGATGTGTGAGTAATTAGTCCACCCACAGGGAGCTGGTGAAATTAAATGGGAAGTTATTTCCTAACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGAGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTGTCCAGTTGTGAAGTTTTGTTGTGTGTGGATTGTACAGTGAAGGTACCAGTGGACAACAGTTGCTCATCAAGCAAGTTTATACAAAAGCTTTCGGACAAGTCCAACTCTAGATAAAATTCTAAAGTATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTATCCAAGGTAACCCACATATCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGTTGGTGAGAAGTGTGCCATGCATAAGCATACTTCACTAGCTTGAATTTTCTGTTAGTCTCACAGGCAACAATTACAATCCTGTATGTTTTTCTATCTCCACACACTCCTGAACATAGAAAGACCAAGTAACATCCCTGGTTAAGATGTGTACAGGTTACAAGACATGTCTAAATATATTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTAAATCAGTTGTCAGTGTAGCATTACTcaaggaataagcagggtcttta---atttatcaaagtttggagtgcaccccaagttggatcactgaagcacataactatagataagatcactcaaaagcacaaaTCCAGGTAATAAA s panTro4.chr3 77214147 862 + 202329955 AATCTTCTTCCTTCTTAATGAATGATTTTTAC--GTCTCTTCATTCATGTCCTTCTAGGTAGAGCAACACTCTGGAGAACTTCCTTTGAGGCATTTCACCACCACAGTAAGTGTGATGCATGACTAATTAGTCCACCCACAGGGGGCTGGTGAAATTAAATTGGAAGTTGTTTCCTAACTGGCATATCTTGGACTAAAATTAATCTAATAACAGCTTTCATAAGAGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTCTCCAGTTGCAAAGTTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAGTGGACAACAGTTGCTCCTCAAGCAAGTTTATACAAAAGCTTTGGGAGAAGTCCAACTCTAGATAAAATTCTAACGTATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTCTCCAAGGTAACCCACATATCGAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGAGAAGTGTGCCATGCATAAACATACTTCACTAGCTTGAATTTTCTATTAGTCTCACAGGCAACAATTACAATCCTGTATGTTTTTCTATCTCCACACACTCCTGTACATAGAAAGACCAAGTAACATCCCTGGTTAAGATATGTACAGGTTACAAGACATGTCTAAACATATTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTAAATCAGTTGTCAGTGTAGCAGTACTCAAGGAATAAGCGGGGTCTTTA---CTTTATCGAAGTTTGGAGTCCACTCCAAGTTAGATCACTGAAACACATAACTATAGATAAGGTCACTCAAAAGCACAAATCCAGGTTATAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42389904 862 + 202140232 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCATGTCCTTCTAGATAGAGCAATACTCTGGAGACCTTCTTTTGAGGCATTTCACCACCAGAGTAAGTGTGATGCATGACTAATTAATCTACCCACAGGGGGCTGGTGAAATTAAATTGGAAGTTGTTTCCTAACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGAGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTCTCCAGTTGTGAAGTTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAGTGGACAACAGTTGCTCATCAAGCAAGTTTATACAAAAGCTTTGGGACAAGTCCAACTCTAGATAAAATTCTAAAATATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTCTCCAAGGTAACCCACATATCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGAGAAGTGTGCCATGCATAAACATACTTCACTAGCTTGAATTTTCTATTAGTCTCACAGGCAACAGTTGCAATCCTATATGTTGTTCTATCTCCACACACTCCTGTACATAGAAAGAGCAAGTAACATCCCTGGTTAAGATGTGTACAGATTACAAGACATGACCAAACATATTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTAAATCAGTTGTCAGTGTAGCAATACTCAAGGAATAAGCAGGGTCTTTA---CTTTATCAAAGTTTGGAGTCCACCCCAAGTTAGATCACTGAAACACATAACTATAGATAAGATCACTCAAAAGCACAAATCCAGGTTATAAA i ponAbe2.chr3 I 26881 C 0 s nomLeu3.chr21_GL397661_2_random 136931 853 - 139590 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTATCTTCATTCATGTACTTCTAGGTAGAGC-ACACTCTGGAGACCTTCTTTTGAGGGATTTCACCAACAGAATAAGTGTGATGAATGACTAATTAGTCCACCCACAGGGGGCTGGTGAAATTAAATAGGAAGTTATTTCCTAACTAGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAAAGAGCATAAGCTTAAAAGACAACATCTTTCATTCAACTTTACGAA--ACCAAGTGCAAATTTAGGTCTCCAGTGGTGAAGTTTGGTTGTTTGTGGATTGTGCAGTGAAGGTACCAGTGGACAACAGTTGCTCATCGAGCAAGTTTATACAAAAGCTTTGGGACAAATCCAACTCTAGATAAAATTCTAAAGTATTTCATGCTTGTGTTCAGAGTTTC-TTTTCTGTCTCCAAGGTAACCCACATATCAAAAGAC--GTGGGTTTGGGGTAGAACTTCCTAAAATTACTGGTGAGAAGTGTGCCATGCATAAACATACTTCACTAGCTTGAATATTCTATTAGTCTCACAGGCAACAATTGCAATCCTGTATGTTGTTCTATCTCCACACACTCCTGTACAT----AGACCAAGTAACATCCCTGGTTAAGATGTGTACAGGTTACAAGACATGTCTAAACATATTCACCAAGAGGTTTATTATTCTCACAGTGGCATTCACTAAATCAGTTGTCAGTGTAGCAATACTCAAGGAATAA-CAGGGTCTCTA---CATTATCAAAGTTTGGAGTCAACCCCAAATTGGATCACTGAAGCACATAACTATAGATAAGGTCACTCAAAAACACAAATCCAGGTTATAAA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 136307 863 + 192599291 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCATGTCCTTCTAGGTAGGGCAACACTCTGGAGACCTTCTTTTGAGGCATTTCTCCACCAGAATAAGTGTGATGTATGATTAATTAGTCTACCCACGGGGGGCTGGTGAAATTAAATTGGCAGTTATTTCCTTACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGCGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTCTGCATTTGTGAAATTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAATGGACGATAGTTGCTCATCAAGTAAGTTTATACAAAAGCTTTGGGACAAGTCCAACTCTAGATAAAATGGTAAAGTATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTCTCCAAGATAACCCACATCTCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGGGAAACGTGCCGCACATAAACATACTTTACTAGCTTGCA-TTTCTGTTGGTCTCACAGGCAACAATTGCAATCCTGTATGTTGTTCTATCGCCACACACTCCTGTTCATAGAAAGACCAAGTACCATACCTGGGTAAGATGTGTGCAGGTCACAAGATATGTCTAAATATGTTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTACATCAGTTATCGATGTAACAATAATCAAGGAATAAGCAGGGAATAAAC-TCTTTATCAAAGTTTGGAGTCAATCCCAATTTAGATCACTGAAGCACATAACTATAGATAAGGTCACTCAAAAGCACAAATCTAGGTTATAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 158920 863 - 192460366 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCATGTCCTTCTAGGTAGGGCAACACTCTGGAGACCTTCTTTTGAGGCATTTCTCCACCAGAATAAGTGTGATGTATGATTAATTAGTCCACCCACGGGGGGCTGGTGAAATTAAATTGGCAGTTATTTCCTTACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGCGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTCTGCATTTGTGAAATTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAATGGACGATAGTTGCTCATCAAGTAAGTTTATACAAAAGCTTTGGGACAAGTCCAACTCTAGATAAAATGGTAAAGTATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTCTCCAAGATAACCCACATCTCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGGAAAACGTGCCGCACATAAACATACTTTACTAGCTTGCA-TTTCTGTTGGTCTCACAGGCAACAATTGCAATCCTGTATGTTGTTCTATCGCCACACACTCCTGTTCATAGAAAGACCAAGTACCATACCTGGGTAAGATGTGTGCAGGTCACAAGATATGTCTAAATATGTTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTACATCAGTTATCGATgtaacaataatcaaggaataagcagggaataaac-tctttatcaaagtttggagtcaatcccaatttagatcactgaagcacataactatagataaggtcactcaaaagcacaaaTCTAGGTTATAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 105304 864 + 187378091 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCATGTCCTTCTAGGTAGGGCAACACTCTGGAGACCTTCTTTTGAGGCATTTCTCCAccagaataagtgtgatgtatGATTAATTAGTCCACCCACAGGGGGCTGGTGAAATTAAATTGGCAGTTATTTCCTAACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGCGAGCATAAGCTTAAAAGACAACATTTTTCATTCAACTTTACCAA--ACAAAGTGCAAATTTAGGTCTGCATTTGTGAAATTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAATGGACAATAGTTGCTCATCAAGCAGGTTTATACAAAAGCTTTGGGACAAGTCCAACTCTAGATAAAATGGTAAAGTATTTCATGCTTGTGTtcagagtttctttttctctctccaagaTAACCCACATCTCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGGGAAACGTGCCGCGCATAAACATACTTCACTAGCTTGCATTTTCTGTTGGTCTCACAGGCAACAATTGCAATCCTGTATGTTGTTCTATCGCCACACACTCCTGTTCATAGAAAGACCAAGTACCATACCTGGGTAAGATGTGTGCAGGTCACAAGATATGTCTAAATATGTTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTACATCAGTTATCGATGTAACAATAATCAAGGAATAAGCAGGGAATAAAC-TCTTTATCAAAGTTTGGAGTCAACCCCAAGTTAGATCACTGAAGCACATAACTATAGATAAGGTCACTCAAAAGCACAAATCCAGGTTATAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 53443 862 - 101219884 AATCTTCTTCCTTCTTAATGAATGATTTTTAT--GTCTCTTCATTCATGTCCTTCTAGGTAGGGTAGCACTCTGGAGACCTTCTTTTGAGGCATTTCTCCACCAGAATAAGTGTGATGTATGATTAATTAGTCCACCCACGGGGGGCTGGTGAAATTAAATTGGCAGTTATTTCCTTACTGGCATATCTTGGAGTAAAATTAATCTAATAACAGCTTTCATAAGCGAGCATAAGCTTAAAAGACAACATTTTTAATTCAACTTTACCAA--AC--AGTGCAAATTTAGGTCTGCATTTGTGAAATTTGGTTGTGTGTGGATTGTACAGTGAAGGTACCAATGGACAACAGTTGCTCATCAAGCAAGTTCATACAAAAGCTTTGGGACAAGTCCAACTCTAGATAAAATGGTAAAGTATTTCATGCTTGTGTTCAGAGTTTCTTTTTCTCTCTCCAAGATAACCCACATCTCAAAAGACATATGGGTTGTGGGTAGAACTTCCTAAAATTGCTGGTGGGAAACGTGCCGCACATAAACATACTTCACTAGCTTGCATTTTCTGTTGGTCTCAAAGGCAACAATTGCAATCCTGTATGTTGTTCTATCGCCACACACTCCTGTTCATAGAAAGACCAAGTACCACACCTGGGTAAGATGTGTGCAGGTCACAAGATATGTCTAAATATGTTCACCAAGAGGTTTATTATTTTCACAGTGGCATTCACTACATCAGTTATCAATgtaacaataatcaaggaataagcagggaataaac-tctttatcaaagtttggagtcaaccccaagttagatcactgaagcacataactatagataaggtcactcaaaaggacaaaTCCAGGTTATAAA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28782407 821 - 39895921 --AGTTCTTCTTTCTTAATAATTGATTTGTAGAAATATTTTTATTCATGTCCTTATAAGGGCAGCAACACTCTCAAGAATTTCTTGTGAGAC-CATAGCCACCAATATAACTGCAATTTATAACTAATTAGCCCACCTACAGGGCGTTGGTTAAATTTAACTGGAAG------------TAAAATATCCTGGAATAAAAGCA---------------TTTTAAGAGAGGTATAGCttaaa----aatgttttt-attaaattttatgaagtataaaatataaattCTGGTCTCCTGTTTTGAAGTTTGATAGTGT---TATTGTACAGTGAATGTGCCAATGGACAACCATTGCTTATTAAGCAAGTTTATGCAAAAGCTTTGGGACAGGTCCAGCTCTAGGTAACGTTGTAAAATATTTGATGCTTGCATTCAGAGTTTCTTTCTCTGTTTCAGACGTAACCCACATATCAACAGATAAATGAGGTGTGGTCAGAGCTTCCCAAAATTGCTGGTGGGAAGTGTTTCATGCATAAGCACACCTCAGTAGCCTGCATCTCCCATGAACTTCTTGGGCAAAAACTATAACTGTGCAGTTCATTCTGTTTCTACCCACTCTTATACATAGCAAGACTAAGGAACACAGTTGGCTAAGATGTGTCTAGTTTACAAGATATGTTTATTTATT----ACAGGAAGTTAATTATTCTTACTGTGAAATTCAGTAAATCA-TTACTGGTATAACAATAATCAAGAAATAAGCAAAGTCTTAACAACTCCACC-----TTAGGGTAAACCACAAGTTAGTTCACTGGAACATATAGCAATAAATAAGAGCACTTCAAGGCACAAGACCAATTTATAAA i canFam3.chr31 C 0 I 343 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=432685.000000 s hg38.chrUn_GL000218v1 139576 157 + 161147 TATTCAGTAGTAGTTTATATGCATTTAGCAATTTGAATGCTGGGAAGTGTAGCCCAGAAAATCAATCGACTTGGAGCTATTAAAGAGGCATTCATGGCACCTGCACTTTGAATCTCTTCAGACTCAGGTTAAACAGGAGACATGGTAGCTCATGTAT s panTro4.chr3 77215009 157 + 202329955 TATTCAGTAGTAATTTATCTGCATTTAGCAATTTGAATGCTGGGAAGTGTAGCCCAGAAAATCAATCGACATGGAACTATTAAAGAGGCATGTATGGCACCTGTACTTTGAATCTCTTCAGACTCAGGTTAAACAGGAGACACAGTAGCTCATGTAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42390766 157 + 202140232 TATTCAGTAGTAGTTTATATGCATTTAGCAATTTGAATGCTGGGAAGTGTAGCCCAGAAAATCAATCGACATGGAACTATTAAAGAGGCATGCATGGCACCTGCACTTTGAATCTCTTCAGACTCAGGTTAAACATGAGATACGGTAGCTCATGTAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 137784 157 - 139590 TATTCAGTAGTAGTTTATATGCATTTAGCAATCTGAATGCTGGGAAGTGTAGCCCAGAAAATCAATCGACACAGAACTGTTGAAGAGGCATGCATGGCACCTGCACTTTGAATCTCTTCAGACTCAGGTTAAACAGGAGACACAGTAGCTCATGTAT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 137170 157 + 192599291 TATTCAGTAGTATTTTATATGCATTTAGCAATTTGGGTGCTGGGAAGTGTAGCCCAGAAAATCAACAGACATGGAACTATTAAAGAGGCGTGCATGGCACCTGCACTTTGAATCTCTTCAAACTCAGGTTAAACAGGAGACACGGTGTCTCATGTAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 159783 157 - 192460366 TATTCAGTAGTATTTTATATGCATTTAGCAATTTGAGTGCTGGGAAGTGTAGCCCAGAAAATCAACAGACATGGAACTATTAAAGAGGCGTGCATGGCACCTGCACTTTGAATCTCTTCAAACTCAGGTTAAACAGGAGACACGGTGTCTCATGTAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 106168 157 + 187378091 TATTCAGtagtattttatatgcatttagCAATTTGAGGGCTGGGAAGTGTAGCCCAGAAAATCAACAGACATGGAACTATTAAAGAAGCATGCATGGCACCTGCACTTTGAATCTCTTCAAACTCAGGTTAAACAggagacacggtggctcatgtat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 54305 157 - 101219884 TATTCAGTAGTATTTTATATGCATTTAGAAATTTGAGTGCTGGAAAGTGTAGCCCAGAAAATCAACAGACATGGAACTATTAAAGAGGCGTGCATGGCACCTGCACTTTGAATCTCTTCAAACTCAGGTTAAACAGGAGACACGGTGGCTCATGTAT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28783571 157 - 39895921 TATTCAGTGGTATTTCCTATACATTTAGCGGTCCTAGCTGTGGAAGGTACAGCCCAGAAAATCATTAAATTTGGGATTGTTGAAGAGGCATGAATAGCAATAGCACATTGGATGTGTTCAGACTCAGGTTAAGCAGGATGTTGGATAGTCCATTTAT i canFam3.chr31 I 343 I 3 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1972.000000 s hg38.chrUn_GL000218v1 139733 3 + 161147 AGT s panTro4.chr3 77215166 3 + 202329955 ACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42390923 3 + 202140232 ACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 137941 3 - 139590 ACT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 137327 3 + 192599291 ACC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 159940 3 - 192460366 ACC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 106325 3 + 187378091 CCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 54462 3 - 101219884 CCC i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28783728 3 - 39895921 I e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1019181.000000 s hg38.chrUn_GL000218v1 139736 393 + 161147 GCAAAAACCCTTCATCTTTCCCTTTTTATCTATGAAACTACCCTTTTCAATGTTATCTAGATGCCTGAAGGTATGAATAACCTTGATCTTGGTAAAAAATGGTACCATCCATCAGCAAAATCTCACTGATCAGTGTCTATGTTACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGTCCAGAATGACAATGTTGACACAATCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCGTCTTTGATAATTGATGGAATGACCTGAAATCAAATGTGAGGCAGTGGAGACACAAGAATGCTATTCAGGAAGTTAGTGATCTGTGGAGATACTAAATGAAATATCTGGAAGGAAATGTAATCTTGCAACTATGCTTTTATGTG-TTTTTTGACATAAA s panTro4.chr3 77215169 393 + 202329955 GCAATAACCCTTCCTCATTGCCTTTTTATCTATGAACCTGCCCTTTTCAGTGTTATCTAGATGCCTGAAGGTATGAATACCCTTGATCTTGGTAAAAAATGGTACCACCAGTTAGCAAAATCTCACTGATCAGTGTCTATGTTACCTCACTGAGTTAGCCTTTTGTGTTGTCATGGCCCAGGATAACAATGTTGACACAGTCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCATCTTTGACAATTGATGGAATGACCTGAACTCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATGCGGGCAGTTAGTGATCTGTGGAGATACTAAATGAAATATATGGAAGGACTTGTAATCTTGCAACTATGCTTTTATGTG-TTTTTTGACATAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42390926 393 + 202140232 GCAATAACCCTTCCTCATTGCCTTTTTATCTACGAACCTGCCCTTTTCAATGTTATCTAGATGCCTGAAGGTATGAATACCCTTGATCTTCGTAAAAAATGGTACCACCTGTCAGCAAAATCTCACTGATCAGTGTCTATGTTACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGCCCAGGATGACAATGTTGACACAATCCAAACCAGTAGTTGGAAAGTTAGTGTTGGATGCGTCTTTGACAATTGATGGAATGACCTAAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATTTGGGCAGTTAGTGATCTGTGGAGATACTAAATGAAATATCTGGAAGGAATTGTAATCTTGCAGCTATGCTTTTATGTG-TTTTTTGACATAAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 137944 388 - 139590 GCAATAACCCTTCCTCATTGCCTTCTTATCTACAAACCTGCCCTTTTCAATGTTATCTAGATGCCTGAAGG------TACCCTTGATCTTGGTAAAAAATGGTACCACCCGTCAGCAAAATCTCACTGATGAGTATCTATGTTACCTCACCGAGTTAGCCTTTTGTGTTGTTGTGGCCCAGGATAACAGTGTTGACACAATCCAAACCAGTGGTTGGAAAGTTAATGTGGGATGCATCTTTGAAAATTGATTAAATGACCTGAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATACAGGCAGTTAGTGATCTGTGGAGATACTAAATGAAATATCTGGAATGAATTGTATTCTTGCAAATATGATTTTATGTGTTTTTTTGACATAAA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s rheMac3.chr2 137330 393 + 192599291 GCAATAACCCTTCCTCATTGCCTTTTTATCTACAAACTCACCCTTTTCAGTGTTATCTAGATGTCTGAAGGTATGAATACCCTTGATCTTGATAAAAAATGGTGCCACCCCTCAGCAAAATGTCACCGATTGGTGTCTATGTCACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGACCCGAATGACAATGTTGACATAATCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCTTCTGTGACAGTTGATGGAATGACCTGAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATTCAGGCAGTTAGTGATCTGTGGAGACACTACGTGAAATATCTAGAAGAGACTGTAATCTTGCAACTATGCTTGTATGTG-TTTTTTGACATAAA i rheMac3.chr2 C 0 I 1 s macFas5.chr2 159943 393 - 192460366 GCAATAACCCTTCCTCATTGCCTTTTTATCTACAAACTCACCCTTTTCAGTGTTATCTAGATGTCTGAAGGTATGAATACCCTTGATCTTGGTAAAAAATGGTGCCACCCCTCAGCAAAATGTCACCGATTGGTGTCTATGTCACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGCCCCGAATGACAATGTTGACATAATCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCTTCTGTGACAGTTGATGGAATGACCTGAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATTCAGGCAGTTAGTGATCTGTGGAGACACTACGTGAAATATCTAGAAGAGACTGTAATCTTGCAACTATGCTTGTATGTG-TTTTTTGACATAAA i macFas5.chr2 C 0 I 1 s papAnu2.chr2 106328 393 + 187378091 GCAATAACCCTTCCTCATTGCCTTTTTATCTACAAACTCACCCTTTTCAGTGTTATCTAGATGTCTGAAGGTATGAATACCCTTGATCTTGGTAAAAAATGGTGCCACCCCTCAGCAAAATGTCACCGATTGGTGTCTATGTCACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGCCCCGAATGACAATGTTGACATAATCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCTTCTGTGACAGTTGATGGAATGACCTGAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATTCAGGCAGTTAGTGATCTGTGGAGACACTATGTGAAATATCTGGAAGAGATTGTAATCTTGCAACTATGCTCTTACGTG-TTTTTTGACATAAA i papAnu2.chr2 C 0 I 1 s chlSab2.chr22 54465 393 - 101219884 ACAATAACCCTTCCTCATTGCCTTTTTATCTACAAACTCACCCTTTTCAGTGTTATCTAGATGTCTGAAGGTATGAATACCCTTGATCTTGGTAAAAAATGGTGCCACCCCTCAGCAAAATGTCACCGATTGGTGTCTATGTCACCTCACTGAGTTAGCCTTTTGTGTTGTTGTGGCCCCAGATGACAATGTTGACATAATCCAAACCAGTAGTTGGAAAGTTAATGTTGGATGCTTCTGTGACAGTTGATGGAATGACCTGAAATCAAATGTGAGGCAGTGGAGACTCAAGAATGCTATTCAGGCAGTTAGTGATCTGTGGAGACACTACGTGAAATATCTGGAAGAGATTGTAATCTTGCAACTATGTTCTTACGTG-TTTTTTGACGTAAA i chlSab2.chr22 C 0 I 1 s canFam3.chr31 28783731 381 - 39895921 GCACCAACATTTCATCATTGCCTTTTTATCTATGGATTCTCTCTTTTCAATGTTCTCTACATGGCTGTAGATATGGCTGCTCTTGGTGCGGGTGTAAAATGGTGTCATATAAACACAAGACTTAACTGACCAGTGTGTATACCACCTCACTGAGTGAGTTCTATTTTTTGTTGT---TCAGGA--GCAATAGTAACATAACAAAAAGTGGTAGTTGGGAAATTAATGTAAGATGCTTCTGGAACAATAGAGTGAATGA--TAAAATCAAATGTAACA-AGCAGAGATGCAAGAAAGCTGTTCAGAACATTCGTGACCTGTGGAAATATTAAGTGTAATATCTGGAAG---TTGTGACCTTGCAACT-TTCCTTAAAGTG-GTCATTGCTATAAA i canFam3.chr31 I 3 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=33465.000000 s hg38.chrUn_GL000218v1 140129 56 + 161147 -AAG-------TTTCTATTTATGGTGGAGCTAGAGTGTCCATTTCCCATG--AAGTTCCCATAGTG s panTro4.chr3 77215562 56 + 202329955 -CAG-------TTTCTATTTATGATGGAGCTGCAGAGTCCATTTCCCATG--AAGTTCCCACAGTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42391319 56 + 202140232 -CAG-------TTTCTATTTATGATGGAGCGGCAGAGTCCATTTCCCATG--AAGTTCCCACAGTG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 138332 56 - 139590 -CAG-------TTTCTACTTATAATGGAGCTGTAGCTTCCATTTCCCATG--AAGTTCCCACAGTG i nomLeu3.chr21_GL397661_2_random C 0 C 0 s canFam3.chr31 28784112 66 - 39895921 TAAGACCTTTTTTTCTGATTGTGATGGAGATATAGTGTCCATTTCCTATAGTAATATCTCATAATG i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=195240.000000 s hg38.chrUn_GL000218v1 140185 390 + 161147 TTAACTAATAcagtcatgtgtcacttaatgacagcggtgtgtctgagaaatgcattgctggacaattttattattgtatgaacatcacagagtttacttacacaaacctagatgctatagctgattacatatctaggttaggtggtatagcctattcctcctaggctacaaacctgtgcagcatgttactgtactgaatactgtaggcaattgtaacacaacagttaagtatatctatacttacttatatctatacagtaagtgtatctatacatgtctaaacatacaagaggtacagtaaaagtacagcgttatgattttattgcaccactgtcatacatgtgcactatccttgaccaaaatgttgttatgtgatgcatgattgTAACA s panTro4.chr3 77215618 385 + 202329955 TTAACTAATAcagtcatgtgtcacttaatgacaggggtatgtctgagaaatgcattcctcgacaattttattattgtatgaacatggcagagtttacttacacaaacctaaatgctatagctgattacatacctaggttatgtggtatagcctattcctcctaggctacaaacctgtgcagcatgttactgtactgaatactgtaggcagttgtaacacaacagttaagtatatctatgcttacttatatctatacagtaagtgtatctatacatgtctaaacatacaagaggtacagtaaaaataga--gttatgattttattgcaccagtgtcatatatgtgcaccatccttgaccaaaa---tgttatgtgatgcatgattgTAACA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42391375 387 + 202140232 TTAACTAATAcagtcatgtgtcacttaatgacaggggtatgtctgagaaatgcattcctggacaattttattattgtatgaacatcgcagagtttacttacacaaacctagatgctatagctgattacatacctaggttatgtggtatagcctattcctcctaggctacaaacctgtgcagcatgttactgtactgaatactgtaggcaattgtaacacaacagttaagtatatctatacttacttatatctatacagtaagtgtatctatacatgtctaaacatagaagaggtacagtaaaaatacaatgttatgattttattgctcaactgtcatatatgtgcaccattcttgaccaaaa---tgttacgtgatgcatgactgTAACA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 138388 390 - 139590 TTAACTAATAcagtcatgtgtcacttaatgagagggatgtgtctgagaaatgcattgctggacaattttattattgtatgaacatcacagagtttacttacacaaacctagatgctatagctgattacatacctaggctatatggtatagcctattcctccaaggttacaaacctgtgcagcatgttactgtactgaatactgtaggcaattgtaacacaacagttaagtatatctatgctcacttatatctatagagtaagtgtatcaatacatgtctaagcatagaataggtacagtaaaaatacagcgttatgattttattgcaccactgacatatatgtgcaccatccttgaccaaaatgttgttatgtgatgcaCTATTGTAACA i nomLeu3.chr21_GL397661_2_random C 0 C 0 e canFam3.chr31 28784178 0 - 39895921 C e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=150141.000000 s hg38.chrUn_GL000218v1 140575 248 + 161147 AAAGAATTAATTAAATATAATATTGAAGTGCCTATTGAGATTTCAATGAA-GAGAGGAATATTTG-TAAATTCTGATTACCTTAAGTGGGAATTGACTTTCTTCCTGTTTCCATGGCTGTTCTTGTGAAAGAACATAGCTTTCCAAAGACCTGAAATCTCTGACAAATCTTGCAATTCTCTATTGCCTGCATTATGAAGGTCACCTGGTATCAAATGAGGCAAAATGGTAGATTATAAAGACCTGTA----CTT s panTro4.chr3 77216003 252 + 202329955 AAAGAATTAATTAAAGATAATATTGAAGTGCCTATTGAGATTTCAATGAA-GAAAGGAATATTTG-TAAATTCTGATTACCTTAAGTGAGAACTGACTTTCTTCCTGTTTCCATGGCTGTTCTTGTGAAAGAGGATAGCTTTCCAAAGACCTGAAATCTCTGACAAATCTTGCAATTCTCTATTGCCTGCGTTATGAAGGTCACCTGGTATCAAATGAGGCAAAATGGTAGATTATAAAGACCTGTACTTTCTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42391762 248 + 202140232 AAAG----AATTAAGGATAATATTGAAGTGCCTATTAAGATTTCAATGAA-GAAAGGAATATTTG-TAAATTCTGATTACCTTAAGTGGGAATTGACTTTCTTCCTGTTTCCTTGGCTGTTCCCGTGAAAGAGCACAGCTTTCCAAAGACCTGAAATCTCTGACAAATCTTGCAATTCTCTATTGCCTGCATTATGAAGGTCACCTGGTACCAAATCAGGCAAAATGGTAGATTAGGAAGACCTGTACTTTCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 138778 251 - 139590 AAAGAATTAATTAAACATAATATTGAAGTGCTTATTGAGATTTCAGTGAC-GAAAGGAATATTTG-TAAATTCTGATTACCTTAAGTGGGAATTGATTTTCTTCCTG-TTCCATGGCTGTACTTGTGAAAGAGCATAGCATTCCAAAGACCTGAAATCTCTGACAAAACACACAATTCAATATTGCCTGCGTTATGAACGTCAGCTGGTATCAAATGAGGCAAAATGGTAGATTATAAAGACGTGTAGTTTCTT i nomLeu3.chr21_GL397661_2_random C 0 C 0 s canFam3.chr31 28784178 241 - 39895921 AAGGAATTAATAAATAATAGTACTGAAGTGCCCACCGGGATTTCAACAAATGAAAGATGTGTTTGTTAAATTCTGATCACCTGAAGAGGGAA-----TTCCTTCCTTCTCACATAACTGTTC---TGAAATGCTGCAGCTGCCCAGGAATGTAGAATGTCTGATATATCTTGGTATTCTCTAGTA-CTGAAAAATGAGGATCACCTGGTGTCAAATGAGGCAAATTTTTATGTTACAAAAACAGGTACTT---- i canFam3.chr31 C 0 I 124 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=80154.000000 s hg38.chrUn_GL000218v1 140823 115 + 161147 GTCAGTTCCTAAACATAGCAAGCCTTGGTCTATCTTGAACATTTCTGCAGTTATAA---ATGAGCCTTGGGTCATGATtttctgcctttttatcatagaca--agatttaatttaggaga s panTro4.chr3 77216255 115 + 202329955 GTCAGTTCCTAAACATAGCAAGCATTGGTCTGTCTTGAACACTTCTGCAGTTATAA---ACTAGCCTTGGGTCATGATTTTCTGCCTTTTTATCATAGACA--AGATTTAATTTAGGAGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42392010 115 + 202140232 CTCAGTTCCTGAACATAGCAAGCATTGGTCTGCCTTGAACATTTCTGCAGTTATAA---ACTAGCCTTGGATCATGATTTTCTGCCTTTTTATCGTAGACA--AGATTTAATTTAGGAGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 139029 115 - 139590 GTCAGTTCCGAAACATAGCAAGCATTGGTTGGTCTTGAACATTTCTGCAGTTATAA---ACTAGCCTTGCGTCATGATTTTCTGACTTTTTATCAAAGACA--AGATTTAATTTAGGAGA i nomLeu3.chr21_GL397661_2_random C 0 C 0 s canFam3.chr31 28784543 120 - 39895921 GTTAACCCCTAAATAGAGCAGGCATTAGTTTGTCTTGAATATTTCTGCAGTTATTATGGACTAAACTTGGGTCATTATTTTCTGCCTACTTATCGTAGAAGACATATTTAGTTTGGGAAA i canFam3.chr31 I 124 I 398 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=32824.000000 s hg38.chrUn_GL000218v1 140938 44 + 161147 tgtccttttaatgtgtaatgtgaatagtaagtgacacttatgaa s panTro4.chr3 77216370 44 + 202329955 TGTGCATTTAATGTGTAATGTGAATAGTAAGTGCCACTTATGAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42392125 44 + 202140232 TGTCCTTTTAATGTGTAATGTGAATAGTAAGTGCCACTTATGAA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chr21_GL397661_2_random 139144 44 - 139590 TGTCCTTTTAATGTGTAATGTGAATAGTAATGGCCACTTATGAa i nomLeu3.chr21_GL397661_2_random C 0 N 0 s canFam3.chr31 28785061 44 - 39895921 TGTTCTTTTAATATGTGATGTGAATTGTAAATGCCATTTGTAAA i canFam3.chr31 I 398 I 1 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=194062.000000 s hg38.chrUn_GL000218v1 140982 345 + 161147 g-cctattttcttccagccattttaattgtcaaa-tctgtccagtcaagatgcattgttagaggcttcactgacaacaccgTCtgtgtgtgtg---gt-----tgtgtgtgtgtgtATACATACATATGATTGAGCAGGATTTATTGTAAGTC--AAAACAGTCTCAAATTTCTTAGGACAATACAGCTTCCTTGGCCATTCCCTTGGAGCTCTGAGTTGAGGAGCTGGTGATGTGTATTTCTCTTGCATGTTC-TCCACATTATCCCTATGCAGACCTTCCATGGGCTTGGTTTTGGAACCAGTGATGAGGAAGATCACTAGAATTGTTGTTGTCAAAAAGATTCCTCCATTCTTCT s panTro4.chr3 77216414 354 + 202329955 GCCCTATTTTCTTCCAGCCATTTTAATTGTCAAA-TCTGTCCAGTCAAGATGCATTGTTAGAGGCTTCACTGACAACACCgtctgtatgtgtgtctgtatgtgtgtgtgtgtgtgtATACATACATATGATTGAGCAGGATTTAATGTAAGTC--AAAACAGTCTCAAATTTCTTAGGACAATACAGCTTCCTTGGCCATTCCCTTGGAGCTCCGGGTTGAGGAGCTGGTGATGTGTATTTCTTTTGCATGTTC-TCCACATTATCCCTATGCAGGCCTTCCATGGGCTTGGTTTTGGAACCAGTGATGAGGAATATCATTAGAATTGTTGTGCTCAAAAAGATTCCTCCATTCTTCT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42392169 352 + 202140232 GCCCAATTTTCTTCTAGCCATTTTAATTATCAAA-TCTGCCCAGTCAAGATGCATTGTTAGAGGCTTCACTGACAACACCGTCtgtgtgtttg--tgtgtgtgtgtgtgtgtgtgtATACATACGTATGATTGAGCAGGATTTAATGTAAGTC--AAAACAGTCTCAAGTTTCTCAGGACAATACAGCTTCCTTGGCCATTCCCTTGGAGCTCTGGGTTGAGGAGCTGGTGATGTGTATTTCTTTTGCATGTTC-TCCACATTATCCCTATGCAGGCCTTCCTTGGGCTTGGTTTTGGAACCAGTGATGAGGAATATCATTAGAATTGTTGTGCTCAAAAGGATTCCTCCATTCTTCT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 16430 343 - 34861 GCCCTATTTTCTTCCAGTCATTTTAATTGTTGAA-TCTATCCAGTCAAGATGCATTGTTAGAGGCTTCACTGACGACACTGTCtgtgtgtgtg--tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt-----------ATTTAATGTAAGTCAAAAAACAGCCTCAAATTTCTAAGGACAATACAGCTTCCTTGGCCATTCCCTTGGAGCTCTGGGTTGAGGAGCTGGTGATGTGTATTTCTTTTGCGTGTTC-TACATGTTATCACTATGCAGGCCTTCCTTGGGCTTGGTTTTGGAACCAGTGATGAGGAATATCATTAGAATTGTTGTGCTCAAAAAGATTCCTCCATTCTTCT i nomLeu3.chrUn_GL397991_1 N 0 C 0 s canFam3.chr31 28785106 290 - 39895921 -GTCTACTACCTTCCAGTCATTTTAATTGCCTAATTCTGGGTAGTCAGGAAGCACAGTTAGAGGCCT--------------------TCTTTG-----------------ATGTCATTATATAGATAT---------------------AGAC--AGATAACTATCAATATTTTGTGATTAGTAAGTATT--TTGACCTTTCTTCTAGGTTTCTGGGTTGGGGAGCTGGGCTTATGTATTTCTTTCACATGTCCTTCCAAATTATACTTATGCAGATTTTCCA-GTGTTGCATTTGGCAAACACTGATGGAG---ATTATTAGAATTGCTATGCTCAGGAA-ATTCTTCCATTCTTCC i canFam3.chr31 I 1 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 54858 1 - 101219884 I e papAnu2.chr2 106721 1 + 187378091 I e macFas5.chr2 160336 1 - 192460366 I e rheMac3.chr2 137723 1 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=411046.000000 s hg38.chrUn_GL000218v1 141327 170 + 161147 GTATAAGCAATGGCAATTTTCCCTGACCAATATTTCTTCTTTTGAAATGGTAAATTTTGAATATTAACTGATTAGT----ATAATCCCATAAAATAACAAAGTTTGAGCCCTATGATCTGTATTTTAGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCA---------------------------TGTATGA s panTro4.chr3 77216768 170 + 202329955 GTACAAGCAACGGCAATTTTCCCAGACCAATATTTCTTCTTCTGAAATGGTAAATTTTGAATATTAACTGGTTACT----ATAATCCCATAAAATAACAAAGTTTGAGTCCTATGAACTGTGTTTTAGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42392521 169 + 202140232 GTATAAGCAATGGCAATTTTCCCAGACCAATATTTCTTCTTTTGAAAT-GTAAATTTTGAATATTAACTGGTTAGT----ATAATCCCATAAAATAACAAAGTTTGAGTCCTGTGAACTGTGTTTTATGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 16773 152 - 34861 GTATAAGCAATGGCAATTTTCCCAGACCAATGTTTCTTCTTTTGAAATGGTAAATTTTGAATATTAACTGGTTAGT----ATAATCCCATAAAATAACAAAGTTTGAGTCCTATGAAC------------------TGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 137724 170 + 192599291 GTATAAGCAATGGCAGTTTTCCAAGACCAATATTTTTTCTTTTGAAACGGTAAATTTTGAAGATTAACTGGTTAGT----ATAATCCCATAAAATAAGAAAGTTTGAGTCCTGTGAACTGTGTTTTTGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i rheMac3.chr2 I 1 C 0 s macFas5.chr2 160337 170 - 192460366 GTATAAGCAATGGCAGTTTTCCAAGACCAATATTTTTTCTTTTGAAACAGTAAATTTTGAAGATTAACTGGTTAGT----ATAATCCCATAAAATAAGAAAGTTTGAGTCCTGTGAACTGTGTTTTTGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i macFas5.chr2 I 1 C 0 s papAnu2.chr2 106722 170 + 187378091 GTATGAGCAATGGCAGTTTTCCAAGAccaatatttcttcttttgaaacgGTAAATTTTGAAGATTAACTGGTTAGT----ATAATCccataaaataagaaagtttGAGTCCTGTGAACTGTGTTTTTGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATAATTTACTCCT---------------------------cgtatga i papAnu2.chr2 I 1 I 293 s chlSab2.chr22 54859 170 - 101219884 GTATAAGCAATGGCAGTTTTCCAAGACCAATATTTCTTCTTTTGAAACGGTAAATTTTGAAGATTAACTGGTTAGT----TTAATCCCATAAAATAAGAAAGTTTGAGTCCTGTGAACTGTGTTTTTGGCTAAAGTTGTGT---------------------------------------TTTATGCTAAAT----------------------------CATCATTTACTCCT---------------------------TGTATGA i chlSab2.chr22 I 1 C 0 s canFam3.chr31 28785396 267 - 39895921 ATACATACAATAATAACTTTCCTAGTCCAATG-TTCTGTTTTTGAAATTGTAAAATTTAAATATCGACTGATTAGTTTACTTACTCCCTTAAAATAACAAAGTTTGACCTAAGTGAGTTGTGTTTTATGCTAAAGTTGTACAGACTCTGCATCACTGTCCACTTCTCATATGGTCTTCTGTTTTTTCTAAGTTTAGGGTAAGAGTAAAGCCACTCCCAGATAttatttatttatttatttatttatttatttatttatttatttatga i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=-7823.000000 s hg38.chrUn_GL000218v1 141497 4 + 161147 --TCtt s ponAbe2.chr3 42392690 4 + 202140232 --TTTT i ponAbe2.chr3 C 0 I 354 s nomLeu3.chrUn_GL397991_1 16925 2 - 34861 --TC-- i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 137894 2 + 192599291 ----tt i rheMac3.chr2 C 0 I 2 s macFas5.chr2 160507 2 - 192460366 ----tt i macFas5.chr2 C 0 I 1 s papAnu2.chr2 107185 2 + 187378091 ----cc i papAnu2.chr2 I 293 I 2 s canFam3.chr31 28785663 4 - 39895921 aatt-- i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e chlSab2.chr22 55029 0 - 101219884 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e panTro4.chr3 77216938 0 + 202329955 C a score=14005.000000 s hg38.chrUn_GL000218v1 141501 9 + 161147 ttttttttt- s panTro4.chr3 77216938 9 + 202329955 ttttttttt- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393048 9 + 202140232 ttttttttt- i ponAbe2.chr3 I 354 C 0 s nomLeu3.chrUn_GL397991_1 16927 9 - 34861 ttttttttt- i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 137898 9 + 192599291 tcttttttt- i rheMac3.chr2 I 2 I 265 s papAnu2.chr2 107189 9 + 187378091 ccttttctt- i papAnu2.chr2 I 2 C 0 s chlSab2.chr22 55029 8 - 101219884 -tttttctt- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28785667 9 - 39895921 -ttcttttta i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e macFas5.chr2 160509 1 - 192460366 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=107490.000000 s hg38.chrUn_GL000218v1 141510 94 + 161147 ---------ttttttt--------------------------tt---tga-gacagagtct-cacactgtca-ctcaggctggagtgcagtggcacaattttggcttactgcaagct-ccgcctccc--aggtgcaca s panTro4.chr3 77216947 94 + 202329955 ---------ttttttt--------------------------tt---tga-gacagagtct-cacacggtta-cccaggctggagtacagtggtgcaattttggcttactgcaagct-ccgcctccc--aggttcaca i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393057 97 + 202140232 ---------ttttttt--------------------------tt---tgaggacggagtctccacactgtcaccccaggctggagtgcagtggcacgattttggctcactgcaagct-tcacctccc--aggttcaca i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 16936 94 - 34861 ---------ttttttt--------------------------tt---tga-gatggagtct-cacactgtcg-cccaggctggagtgcagtggcatgattttggctcacggcaagct-ccacctccc--ggattcaca i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 160510 96 - 192460366 ---------ttctttt--------------------------ttgggggg-gacggagtct-ggctctgtgg-cccaggctggagtg-aggggcgccatcttggctccctgcaagct-ccgcccccc--gggttcccg i macFas5.chr2 I 1 I 72 s papAnu2.chr2 107198 96 + 187378091 ---------ttttttt--------------------------tt---gaa-gacggagtct-cgctctgtgg-cccaggctggagtg-agcggcgccatcttggctccctgcaagctcccgcccccccGGGGTtcccc i papAnu2.chr2 C 0 I 1 s chlSab2.chr22 55037 93 - 101219884 ---------ttttttt--------------------------tt---tga-gacggagtct-ggctctgcgg-cccaggctggagtg-agcggcgccatcttggctccctgcaagct-ccgcccccc--gggttcccg i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28785676 129 - 39895921 tttttttaatttttttattattattttttaaatttttatttatt---tat-gatagtcaca-cacacacaga-gagagagagagaggcagagacacaggcagagggagaagcaggct-ccatgcacc--gggagcccg i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e rheMac3.chr2 137907 265 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=71217.000000 s hg38.chrUn_GL000218v1 141604 34 + 161147 --------ccatcctcctgcttcagcctcctgagtag----ctggg s panTro4.chr3 77217041 34 + 202329955 --------ccattctcctgcctcagcctcctgagtag----ctggg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393154 34 + 202140232 --------ccattctcctgcctcagcctcctgggtag----ctggt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17030 34 - 34861 --------ccattctcctgcctcagcctcctgagtag----ctggg i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138172 34 + 192599291 --------ccattctccggcttccgcctcccgaggag----ctggg i rheMac3.chr2 I 265 C 0 s macFas5.chr2 160678 34 - 192460366 --------ccattctccggcttccgcctcccgaggag----ctggg i macFas5.chr2 I 72 C 0 s papAnu2.chr2 107295 34 + 187378091 --------ccattctcctgcctcagcctcccgaggag----ctggg i papAnu2.chr2 I 1 C 0 s chlSab2.chr22 55130 34 - 101219884 --------ccattctccggcttctgcctcccgaggag----ctggg i chlSab2.chr22 C 0 I 137 s canFam3.chr31 28785805 41 - 39895921 acgtgggactggattctgg-----gtctccaggatcgcgccctggg i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=53911.000000 s hg38.chrUn_GL000218v1 141638 27 + 161147 ---actacaggtgc----ccaccaccacacccag s panTro4.chr3 77217075 27 + 202329955 ---actacaggtgc----ctgccaccatgcccgg i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393188 27 + 202140232 ---actacaggtgc----ccaccaccatgcccgg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17064 26 - 34861 ---aatacaggtg-----ctgccaccatgcccgg i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138206 26 + 192599291 ---accacaggcg-----ccgccaccgcgcccgg i rheMac3.chr2 C 0 C 0 s macFas5.chr2 160712 26 - 192460366 ---accacaggcg-----ccgccaccgcgcccgg i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107329 26 + 187378091 ---accacaggcg-----ccgccaccacgcccgg i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55301 26 - 101219884 ---actacaggcg-----ccgccaccacgcccgg i chlSab2.chr22 I 137 C 0 s canFam3.chr31 28785846 34 - 39895921 ccaaaggcaggtgccaaaccgctgcgccacccag i canFam3.chr31 C 0 I 7 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=79286.000000 s hg38.chrUn_GL000218v1 141665 35 + 161147 ctaattg-tttTTTAAGATTAAGGGCGAAATAAAAG s panTro4.chr3 77217102 35 + 202329955 ctaattg-tttTTTAAGATTAAGGGCAAAATCAAAG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393215 36 + 202140232 ctaattgtttTTTTAAAGTTAAGGGCAAAATCAAAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17090 35 - 34861 ctaattg-tttTTTAAGATTAAGGGCAAAATCAAAG i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138232 35 + 192599291 ctcattG-CTTTTTAAGATTAAGGGCAAAATCAAAG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 160738 35 - 192460366 ctcattG-CTTTTTAAGATTAAGGGCAAAATCAAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107355 35 + 187378091 ctcattg-cTTTTTAAGATTAAGGGCAAAATCAAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55327 35 - 101219884 cTCATTG-TTTTTTAAGATTAAGGGCAAAATCAAAG i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28785880 7 - 39895921 I e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=778759.000000 s hg38.chrUn_GL000218v1 141700 295 + 161147 CTGCTCCCCTATATTACATTCATAAATCAGAATTATTAAAGCAAGCTATTTATTTATTACAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAATTTA--CTTTTTAGGGTCTATAGCTATATTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGGTAAATTGATAAATGAAAATAATGTATGTGATAAGGAGAACAACCTAGGT-CTCCTGGAGGGCCCCTtacaactcagctggtgttagcagaaatgcctgggtgtaa s panTro4.chr3 77217137 294 + 202329955 GTGCTCCCCTATATTACATTCATAAATAAGGATGATTAAAGCAAGCTATTTATTTATTAGAAACACATACTCCAAATTTAGCGTCTAAGACATGACAACCTTTCAAGAGACATCAATTTA--CTTTTTAGTGTCTATAGCTATCTTTGTATTCATGTTATTGGTGTCCATAGTATTTCATTAGATGTTCTGGGTAAATTGATAAATGAAAATAATGTATATGATAAGGAGAACAACCTAGGC-CTCCTGGAGGGCCCCTTACAACTCAGCTGGTGTTAGCAGAAATGCC-GGGTGCAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393251 293 + 202140232 CTGCTCCCTTATATTACATTCATAAATCAGAATGATTAAAGCAAGCTATTTATTTATTAGAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAATTTA--CTTTTTAGTGTCCATAGCTATATTTGTATTC--GTTATTGGTGTCCATAATATTTCATTACATGTTTTGGGTAAATTGATAAATGAAAATAATGTATATGATAAGGAGAACAACCTAGGC-CTCCTAGAGGGCCCATtacaactcagctggtgttagcagaaatgcctgggtgtaa i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17125 293 - 34861 CTGCTCCCCTATATTATATTCATAAACCAGAATGATTAAAGCAAGCTATTTATTTATTAGAAGCACATATTCCAAATTTAGCATCGAAGACATGACAGCCTTTCAAAAGACATCAATTTA--CATTTTTGTGTCTATAGCTATGTTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGGCAAATCGATAAATGAAAATAATGTATATGATAAGGAGAACAATCTAGGC-CTCCTGGA-GGCCCCTTACAACTCAGCTGGTG-AAGCAGGAATGCCTGGGTGTAA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138267 295 + 192599291 CTGCTCCCCTATATTACATTCATGAATCAAAATGATTAAAGCAAGCTATTTACTTATTAGAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAATTTA--CTTTTTAGTGTCTATAGCTGTATTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGCTAACTTGATAAATGAAAATAATGTATATGATAAGGAGAGCAACCCAGGC-CTCCTGGAGGGCCCCTTACAACTCAGCTGGTGTTAGCAGAAATGCCTGGGTGTGA i rheMac3.chr2 C 0 I 7 s macFas5.chr2 160773 295 - 192460366 CTGCTCCCCTATATTACATTCATGAATCAAAATGATTAAAGCAAGCTATTTACTTATTAGAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAATTTA--CTTTTTAGTGTCTATAGCTGTATTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGCTAACTTGATAAATGAAAATAATGTATATGATAAGGAGAGCAACCCAGGC-CTCCTGGAGGGCCCCTTACAACTCAGCTGGTGTTAGCAGAAATGCCTGGGTGTGA i macFas5.chr2 C 0 I 1 s papAnu2.chr2 107390 291 + 187378091 CTGCTCCCCTATATTACATTCATGAATCAAAATGATTAAAGCAAGCTAT----TTATTAGAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAATTTA--CTTTTTAGTGTCTATAGCTGTATTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGCTAActtgataaatgaaaataatgtatatgataAGGAGAGCAACCTAGGC-CTCCTGGAGGGCCCCTTACAACTCAGCTGGTGTTAGCAGAAATGCCTGGGTGTGA i papAnu2.chr2 C 0 I 1 s chlSab2.chr22 55362 290 - 101219884 CTGCTCCCCTATATTACATTCATGAATCAAAATG-TTAAAGCAAGCTAC----TTATTAGAAACACATACTCCAAATTTAGCATCTAAGACATGACAGCCTTTCAAGAGACATCAGTTTA--CTTTTTAGTGTCTATAGCTGTATTTGTATTCATGTTATTGGTGTCCATAATATTTCATTAGATGTTCTGGGTAACTTGATAAATGAAAATAATGTATATGATAAGGAGAACAACCCAGGC-CGCCTGGAGGGCCCCTTACAACTCAGCTGGTGTTAGCAGACATGCCTGGGTGTGA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28785887 294 - 39895921 CGACTCCCAGATATTTTAGTCACTAATCAGAATGATTAAAGCAAACTATCCACGTACTAGAAACATGTACTCCAAACTCAGCATCTAAGACGTGGCAAGCTTTGAAaaggcaccaatttcatcttcatagcatttacatctatatttgcactcttatcattggtgtttataatatttaattaagttttgtatgtacagggataacagaaaatagtctatatacaatgaggaataaagtatgcgctgttagtaaacc---tacaactcagc-ggtattggcagaagtgtcagggtataa i canFam3.chr31 I 7 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1447.000000 s hg38.chrUn_GL000218v1 141995 5 + 161147 cagtg s panTro4.chr3 77217431 5 + 202329955 TGGTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393544 5 + 202140232 cagtg i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17418 5 - 34861 TAGTG i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 161069 4 - 192460366 -CAGC i macFas5.chr2 I 1 C 0 s papAnu2.chr2 107682 4 + 187378091 -CGGG i papAnu2.chr2 I 1 C 0 s chlSab2.chr22 55652 5 - 101219884 TCGGG i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28786181 5 - 39895921 taggg i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e rheMac3.chr2 138562 7 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2422.000000 s hg38.chrUn_GL000218v1 142000 14 + 161147 agAAACAACCTTTC s panTro4.chr3 77217436 14 + 202329955 AGAAACAACCTTTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393549 14 + 202140232 agAAATGACCTTTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17423 14 - 34861 AGAAACAACGTTTC i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 161073 2 - 192460366 AG------------ i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107686 5 + 187378091 AGAAA--------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55657 5 - 101219884 AGAAA--------- i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28786186 0 - 39895921 C e micMur1.scaffold_84608 875 3868 - 5045 I e rheMac3.chr2 138562 7 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=272960.000000 s hg38.chrUn_GL000218v1 142014 140 + 161147 AAAAGTATTGAGCAATTTTTCAGGCAGAGGAATATGTATGCCAATCCAGGCAGCAAGATAAGTGGAGGTCAGTTAAAAGATCAGTG-TGTGATTACAT-------------TTTTTTTTT-----AAGGTTTCTACTGAGAGGAAATATAACACTCAGT s panTro4.chr3 77217450 139 + 202329955 AAAAGTGTTGAGCAGTTTTTCAGGTAGAGGAATATGTATGCCAATCCAGGCAGCAAGATAAGTGGAGGTCAGTTAAAAGATCAGGC-TGTGATTACAC-------------GTTATTTTT-----TAGGTTTCTACTGAGAGGAAATATAACACTCAG- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393563 153 + 202140232 AAAAGTGTTGAGCAGTTTTTCAGGCAGAGGAATATGTATGCCAATCCAGGCAGCAAGATAAGTGGAGTTCAGTTAAAAGATCAGGT-TGTGATTACACATTTTTTTTTTGTTTTTTTTTT-----TAGGTTTCTACTGAGAGGAAATATAACACTCAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17437 142 - 34861 AAACGTGTTGGGCAG-TTTTCAGGCAGCGGAGTATGTATGCCAATCCAGGCAGCAAGATAAGTGGAGGCCAGTTCAAAGATCAGGT-TGTGATTACAC-------------GTTTTTTTTGTTTGTTTGTTTCTACT--GAGGAAATATAACACTTAGT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138569 141 + 192599291 AAAAGTGTAGAGCAGTGTTTCAGGCAGAGGAGTATGTATGCCAATCCGGGGAGCAAGGTAGGTGGAGGCCACTTAAAAGTTCAGGTATGTGATTACAC-------------GTTTCTGTT-----TAGGTTTCTACTGAGAGGAAATATAACACTCGGT i rheMac3.chr2 I 7 C 0 s macFas5.chr2 161075 141 - 192460366 AAAAGTGTAGAGCAGTGTTTCAGGCAGAGGAGTATGTATGCCAATCCGGGGAGCAAGGTAGGTGGAGGCCACTTAAAAGTTCAGGTATGTGATTACAC-------------GTTTGTGTT-----TAGGTTTCTACTGAGAGGAAATATAACACTCGGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107691 138 + 187378091 ---AGTGTAGAGCAGTGTTTCAGGCAGAGGAGTATGTATGCCAATCCAGGGAGCAAGGTAGGTGGAGGCCACTTAAAAGTTCAGGTATGTGATTACAC-------------GTTTGTGTT-----TAGGTTTCTACTGAGAGGAAATATAACACTCGGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55662 138 - 101219884 ---AGTGTAGAGCAGTGTTTCAGGCCGAGGAGGATGTATGCCAATCCGGGGAGCAAGGTAGGTGGAGGCCACTTAAAAGTTCAGGTATGTGATTACAC-------------GTTTGCGTT-----TAGGTTTCTACGGAGAGGAAATATAACACTCGGT i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28786186 0 - 39895921 C e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=292471.000000 s hg38.chrUn_GL000218v1 142154 128 + 161147 TATTATTTTCTCCGCATATCTCTGGTTATT-----TTGTCACAACTTTTTATGT--AAGCTACTACCAAACACTGGGTTATCCAAGATCTATGGGTCGTATTCAATATTTGCTTTTCCCTCAACTACTA-ACACGT s panTro4.chr3 77217589 126 + 202329955 --TTATTTTCTCCGTATATCTCTGGTTATT-----TTGTCACAACCTTTTATGT--AAGCTGCTACCAAACGCTGGGTTATCCAAGATCTGTGGGTCGTATTCAATATTTGCTTTTCCCTCAACTACTA-ACACAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393716 128 + 202140232 TATTATTTTCTCCGTATATCTCTGGCTATT-----TTGTCACAACCTTTTATGT--AAGCTACTACCAAACACTGAGTTATCCAAGATCTATGGGTTGTATTCAATATTTGCTTTTCCCTCAACTACTA-ACACGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 17579 126 - 34861 TATTATTTTCTCCATCTATCCC--GCTATT-----TTGTCAAAACCTTTCATGT--AAGTTACTACCAAACACTGGGTTATCCAAGATCTGTGGGTCGTATTCAATATTTGCTTTTCCCTCAACTACTA-ACACAT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138710 129 + 192599291 GATTGTTTTCTCCGTATGTCTCTGGCTGTT-----TTGTCACAACC-TTTACGTAAAAGCTGCTACCAAACACAGGGTTATCCAAGATCTGTGGGTCATCTTCAATGTTTGCTTTTCCCCCAACTCCTA-ACACGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 161216 129 - 192460366 GATTGTTTTCTCCGTATGTCTCTGGCTGTT-----TTGTCACAACC-TTTACGTAAAAGCTGCTACCAAACACAGGGTTATCCAAGATCTGTGGGTCATCTTCAATGTTTGCTTTTCCCCCAACTCCTA-ACACGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107829 129 + 187378091 GATTGTTTTCTCCGTATATCTCTGGCTCTT-----TTGTCACGCCT-TTTACATAAAAGCTGCTACCAAACACAGGGTTACCCAAGATCTGTGGGTCATCTTCAATGTTTGCTTTTCCCCCAACTCCTA-ACACGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55800 130 - 101219884 GATTGTCTTCTCCGTATATCTCTGGCTATT-----TTGTCACAACCTTTTACGTAAAAGCTGCTACCAAACACTGGGTTATCCAAGAGCTGTGGGTCATCTTCAATGTTTGCTTTTCCCCCAACTCCTA-ACACGT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28786186 132 - 39895921 TATAATGATCTCTTTATCTCTTTGGCTATTATTACTTGTTA--ACATTTTGTGA--AAACTACTAGCAGGCACTGTTTCATCCAAGAGTTATGGGTCATACTCAACATTGATTTTTTTCAGTACCCCAATGCACAT i canFam3.chr31 C 0 I 279 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=765376.000000 s hg38.chrUn_GL000218v1 142282 287 + 161147 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCTGTTTTCTCCAACCACACTGAGTTAATAAGCCT-CCTATATACTCTCATACCCTGTTTTAT-----------------CTAAAGAGATTTCCTTTTTCTACTATTATACCCATCTCATTCCTTAATTTATTTCTTCTTATTTCTCTCTCTATTTTTTACtcttttaggcacagctcatgtctcatgactttcaaaaagtttttcttctgatattcccagctcgaattaggtacatcctgatcagtttccttagacttacaag s panTro4.chr3 77217715 305 + 202329955 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCTGTTTTCTCAAACCTCAGTGAGTTAATGAGCCTCCCTGTATACTCTCATACCCTGTTTCATCTCTAAGCTCCCTTGACCTGAAGAGATTTCCTTTTCCTACTAGTATAGTCATCTCATTCCCTAATTTATTTCTTCTTATTTCTCTCTATATTTTTTATtcttttaggcacagctcatgcctcatgactttcaaaaagtttttcttctgatattcccagcttgaattaggtatatcctaatcagtttccttagacttaccac i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42393844 305 + 202140232 Ttgattccctttgtaactctctcccctatttctcctttcaacctgttttctccaaccacactgagttaacgagcctccctatatactctcataccctgtttcatctctaagctcccttgacctagagagatttcctttttctacgattatactcatctcatcccctaatttatttcttcttatttatctctatattttttattcttttaggcacagctcatgtctcatgactttcaaaaagtttttcttttgatattcccagcttgaattaggtatatcctaatcagtttcattagacttaccaa i ponAbe2.chr3 C 0 I 949 s nomLeu3.chrUn_GL397991_1 17705 303 - 34861 TTGATTCCCTTTGTAACTTTTTCCC--GTTTCTCCTTTCAGCCTGTTTTCTCTGACCACACTGAGTTTATGAGCTTCCCTATGTACTCTCACACCCTGTTTCATCTCTAAGCTCCCTTGACCTAAAGAGATTTCCTTTTTCTACTATTGTACTCATCTCATTCCCTAATTTATTTCGTGTTATTTCTCCCTATATTTTTTATtcttttaggcacagctcatgtctcatgactttcaaaaagtttttcttgtgatattcccagctcgaattaagtacatcctaatcagtttccttagactcaccac i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 138839 305 + 192599291 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCCGTTTTCTCCAACCGCACTGAGTTAGTGAGTCTCCCTGTATACTCTCATACCCTGTTTCATCTCTCAGCGCCCTTGACCTAAAGAGATCTCCTTTTTCTACTCTTATACGCATCTCATTCCCTAATTTATTTCTTTTTGTTTCTCTCTATATTTTTTATTCTTTTAGGCACAGCTCATGTCTCGTGACTTTCAAAAAGCTTTTCTTCTGATATTCCCAGCTTGAATTAGGTGCATCCTAATCCGTTTCCTTAGACTTACCAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 161345 305 - 192460366 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCCGTTTTCTCCAACCGCACTGAGTTAGTGAGTCTCCCTGTATACTCTCATACCCTGTTTCATCTCTCAGCGCCCTTGACCTAAAGAGATCTCCTTTTTCTACTCTTATACGCATCTCATTCCCTAATTTATTTCTTTTTGTTTCTCTCTATATTTTTTATTCTTTTAGGCACAGCTCATGTCTCGTGACTTTCAAAAAGCTTTTCTTCTGATATTCCTAGCTTGAATTAGGTGCATCCTAATCCGTTTCCTTAGACTTACCAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 107958 305 + 187378091 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCCGTTTTCTCCAACCACACTGAGTTAGTGAGTCTCCCTGTATACTCTCATACCCTGTTTCATCTCTCAGCGCCCTTGACCTAAAGAGATCTCCtttttctactcttatacgcatctcattccctaatttatttctttttatttctctctatattttttattcttttaggcACAGCTCATGTCTCGTGACTTTCAAAAAGCTTTTCTTCTGATATTCCCAGCTTGAATTAGGTACATCCTAATCCGTTTCCTTAGACTTACCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 55930 301 - 101219884 TTGATTCCCTTTGTAACTTTCTCCCCTATTTCTCCTTTCAACCCATTTTCTCCAACCGCACTG-GTTAGTGAGTCTCCCTGTATACTCTCATACCCTGTTTCATCTCTCAGCGCCCTTGACCTAAAGAGAT---CTTTTTCTACTCTTATACGCATCTCATTCCCTGATTTATTTCTTTTTATTTCTCTCTATATTTTTTATTCTTTTAGGCACAGTTCATGTCTCGTGACTGTCAAAAAGCTTTTCTTCTGATATTCCCAGCTTGAATTAGGTACATCCTAATCAGTTTCCTTAGACTTACCAC i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28786597 291 - 39895921 TTAATTTCCTTCATAGCCTTTATTCCTGCCTTTCCTTTCATACCATTTTCTCCAACCTTAGTGAGGCAATGAATCTT------TGTTCTCATGGCTTCTCTCATCTCCAAG-TTCCTTGGCCTGAAGAGATATCCTTTACCTACCATCATAACTATATCATCCTCTAATTTACTTTTATTTATTTCTATTTT--TTTTTCATTCTTCTGGGCATAGTGTA-GTATAACTACTTTCAAAG----TTTTCTCTGATATTCTCAGTCTGAATTAGGCATATGTAGATGAACTTCTGGAGATTTACTCT i canFam3.chr31 I 279 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1831230.000000 s hg38.chrUn_GL000218v1 142569 708 + 161147 tctgcatattattggcttg-caatctgtcttaggctgggaattagctccttgtaggcagggactagaatttatttcctctt--atgtccataatgcctgacacaggaactATTCTCACATACAAATTGTAGGGCCATAATTCCTGAGAACATATGTATATTTTAGTGACTCATAAAGGCTTGAAATACATTTTTAAAATGATTAATTG-GGAAGTCCATGAAC-TTGACATCTTGATGTAGAAGAAAAGCAAGGGCAGATGAAGAAGTTATACAGGATACTTGAAATACCAGAAGAATATAATCAGAGAGCAATAAATTAATCCTAGATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTGAAGACTTGGCTCTAGGGAT-GAGTACATAACAGAGGCCAGTAGCCAGACT----CAGAGCTTTAAAG--AGTGAAGAAATTGCATTGCAGGGGGAAGGACTGTTGTATACTAAATAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCTGTGGATGAGAGAC-CAAAATGGTGTGGAGATAGAGGTTAATGCCATAATCTACAAAGAAGATA-TTTTTGTGCCAGAAAGAAATAATAGGTCTAGAATGTAATAAAAGATAAATAGTTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATAGCCATTGATATTAACTTCCACTTTGCTTCCAGACAAAATAT s panTro4.chr3 77218020 709 + 202329955 tctgcatattatttgcttg-caatctgtcttaggctgggaattagctgcttgtaggcaggggctagaatttatttactctt--atgtccataatgcctgacagaagacctattctcacacaCAAATTGTAAGGCCATAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTTAAAATGATGAATTG-GGAAGTCCATGAAC-TTGATATCTCGATGTAGAAGAAAAGCAAGGGCAGATGAAGAAGTTATACAGGATACTTGAAATACCAGAAGAATATAGTCAGAGAGCAATAAATTAATCCTGGATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTGAAGACGTGGCTCTAGGAAT-CAGTACATAACAGAGACCAGTAGCCAGAGT----CAGAGCTTTTCAG--AGTGAAGAAATTGCATTGCAGGGGGAAGGGCTGTTGTATACTAAACAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCCGTGGATGAGAGACACAAAAAGGTGTGGAGATAGACGTAGATGCCATAATGTACAAAGAAGATA-TTTTTGTGCCAGGAAGAAAGAATAGGTCCAGAATGTAATAAAAGATAAATCGTTAACTATGTTGTAATGTGGTCTGAGAACTTACTGAAGGCATAGCCATTGATATTAACTTCCACTTTGCTTCCAGACAAAAGat i panTro4.chr3 C 0 I 6198 s ponAbe2.chr3 42395098 709 + 202140232 tctgcatattatttgcttg-caatctgtcttaggctgggagttagctccttgcaggcaggggctagaatttatttactctt--atgtccataatgcctgacacaggaactATTCTCACATATAAATTGTAGGGCCATAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTTTAAATGATGAGTTG-GGAAGTCCAGGAAC-TTGACATCTCGATGTAGAAGAAAAGCAAGGGGAGACGAAGAAGTTATACAGGATACTTGAAATACCAGAAGCATATAGTCAGAGAGCAATAAGTTAATCCTATATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTGAAGACATGGCTCTAGGAAT-GAGTACATAACAGAGACCAGTAGCCAGAGT----CAGAGCTTTTCAG--AGTGAAGAAATTGCATTGCAGGGGGAAGGGCTGTTGTATACTAAACAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCTGTGGATGAGAGATGCAAAAAGGTGTGGAGATAGAGGCAAATGCCATCATCTACAAAGAAGATA-TTTTCATGCCAGGAAGAAAGAATAGGTCTAGAATGTAATAAAAGATAAATAGTTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATAGCCATTGATATTAACTTCCACTTTGCTTCCATACAAAAGAT i ponAbe2.chr3 I 949 C 0 s nomLeu3.chrUn_GL397991_1 18008 709 - 34861 tctgcatattatttgcttg-cagtctgtcttaggctgggaattagctgcttgtaggcaggggctagaatttatttactctt--atgtccataatgcctgacacaggaactgTTCCCACATACAAATTGTAGGGCCATAATTCCTGAGAGCATATGTATATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTTAAAATGATGAATTG-GGAAGTCCATGAAC-TTGATATCTTGATGTAGAAGAAAAGCAAGGGCAGATGAAGAAGTTATACAGGATACTTGAAATACCAGAAGAATATAGTCAGAGAGCAATAAATCAATCCTAGATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTGAAGACATGGCTCTAGGAAT-GAGTACATAACAGAGACCAGTAGCCAGAGT----CAGAGCTTTTCAG--AGTGAAGAAATTGCATTGCAGGGAGAAGAGCTGTTGTATACTAAACAGAAATTATCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCTGTGGCTGAGAGATGCAAAAAGGTGTGGAGATAGAGGTAAATGCCATAATCTACAAAGAAGATA-TTTTTGTGCCAGGAAGAAAGAATAGGTCTAGAATGTAATAAAAGATAAATAGGTAGCTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATAGCCATTGATGTTAACTTCCACTTTGCTTCCAGACAAAAGAT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 139144 710 + 192599291 TCTGCATATTATTTGCTTG-CAATC--TCTTAGGCTAGGAATTAGCTCCTTGTAGTCAGAGGCCAGAATTTATTTACTCTTAAATGTCCATAATGCCTGACACAGGATCTATTCTCATATACCAATTGTAGGGCTGTAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTAAATATGATGAATTGAGGAAGTCCATGACC-TTGACCTCTCCATGTAGAAGAAAAGCAAGAGCAGATGAAGAAGTTATACAGGATACCTGCAATACCAGAAGAATATAGTCAGAGAGCAATACATTAATCCTAGATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTAAAGACATGACTCTAGAAAT-GAGTACATAACAGAGACCAGTTTCCAGAGT----CAGAGCTTTTAAG--AGTGAAGAAATTGCATTGCAGGGAGAAGGGCTGTTGTATACTTAACAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCTGTGGATGAGAGACGCAAAAAAGTGTGGAGATAGAGGTAGATGACATAATCTTCAAAGAAGATA-TTTTTGTGCCAGGAAGAAAGAATAGGTCTAGAATGTAATAAAAGATAAATAGGTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATATCCATTGATATTAACCTCCACTTTGCTTCCAGACAAAAGAT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 161650 710 - 192460366 TCTGCATATTATTTGCTTG-CAATC--TCTTAGGCTAGGAATTAGCTCCTTGTAGTCAGAGGCCAGAATTTATTTACTCTTAAATGTCCATAATGCCTGACACAGGATCTATTCTCATATACCAATTGTAGGGCTGTAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAGGCTTGAAATAAATTTTAAATATGATGAATTGAGGAAGTCCATGACC-TTGACCTCTCCATGTAGAAGAAAAGCAAGAGCAGATGAAGAAGTTATACAGGATACCTGCAATACCAGAAGAATATAGTCAGAGAGCAATACATTAATCCTAGATTTTTAGATGTGAAGAAGTTCT--GAGAAATATTTAAAGACATGACTCTAGAAAT-GAGTACATAACAGAGACCAGTTTCCAGAGT----CAGAGCTTTTAAG--AGTGAAGAAATTGCATTGCAGGGAGAAGGGCTGTTGTATACTTAACAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGATCTGTGGATGAGAGACGCAAAAAAGTGTGGAGATAGAGGTAGATGACATAATCTTCAAAGAAGATA-TTTTTGTGCCAGGAAGAAAGAATAGGTCTAGAATGTAATAAAAGATAAATAGGTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATATCCATTGATATTAACCTCCACTTTGCTTCCAGACAAAAGAT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108263 710 + 187378091 TCTGCATATTATTTGCTTG-CAATC--TCTTAGGCTAGGAATTAGCTCCTTGTAGTCAGAGGCCAGAATTTATTTACTCTTAAATGTCCATAATGCCTGACACAGGATCTATTCTCATATACCAATTGTAGGGCTGTAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAggcttgaaataaattttaaatatgatgAATTGAGGAAGTCCATGACC-TTGACCTCTCCATGtagaagaaaagcaagagcagATGAAGAAGTTATACAGGATACCTGCAATACCAGAAGAATATAGTCAGAGAGCAATACATTAATCCTAGATTTTTAGATGTGAAGAAGTtct--gagaaatatttaaagacatgaCTCTAGGAAT-GAGTACATAACAGAGACCAGTTTCCAGAGT----CAGAGCTTTTAAG--AGTGAAGAAATTGCATAGCAGGGAGAAGGGCTGTTGTATACTTAACAGAAATTGTCATTAAATGGAAGACTAAGCAAGAGGCTGATGGTCTGTGGATGAGAGACGCAAAAAAGTGTGGAGATAGAGGTAGATGACATAatcttcaaagaagata-tttttgtgCCAGGAAGAAAGAATAGGTCTAGAatgtaataaaagataaataggTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATATCCATTGACATTAACCTCCACTTTGCTTCCAGACAAAAGat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 56231 708 - 101219884 TCTGCATATTATTTGCTTG-CAATCTGTCTTAGGCTGGGAATTAGCTCCTTGTAGTCAGAGGCCAGAATTTGTTTACTCTTAAATGTCCATGATGCCTGACACAGAATCTATTCTCATATACCAATTGTAGGGCTGTAATTCCTGAGAACATATGTATATTGTAGTGACTCATAAAGGCTTGAAATACATTTTAAATATGATGAATTGAGGAAGTCCATGAAC-TTGACCTCTCCATGTAGAAGAAAAGCAAGGGCAGTTGAAGAAGTTATACAGGATACCTGTAATACCAGAAGAATATAGTCAGAGAGCAATACATTAATCCTAGATTTTTAGATGTGAAGACGTTCT--GAGAAA----TAAAGACATGTCTCTAGGAAT-GAGTACATAACAGAGACCAGTTTCCAGAGT----CAGAGCTTTTAAG--AGTGAAGAAATTGCATTGCAGAGGGAAGAGCTGTTGTATACTTAACAGAAATTGTCATTAAATGGAAGATTAAGCAAGAGGCTGATGATCTGTTTATGAGAGATGCAAAAAGGTGTGGAGATAGAGGTAGATGTCATAATCTTCAAAGAAGATA-TTTTTGTGCCAGGAAGAAAGAATAGGTCTAGAATGTAATAAAAGATAAATAGGTAACTACATTGTAATGTGGTCTGAGAACTCACTGAAGGCATATCCATTGATATTAACCTCCACTTTGCTTCCAGACAAAAGAT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28786888 670 - 39895921 TTTGCAATTTGCTTGTTTGTCAGTG--CATTAGGCTAGAAACTAGCTCCCTATAGGCATGGTTTGG-----------------ATATATTTAATGCCTGCCGTGAAGCCTATGGTCATATACACATTGTAGGACCATAATTCCCGAAGACATACACACACTGTAGGGACCAATAAAGGCTTGGAATAAG-TGAAAATGTGAGAAATTGGAAGAATCTGTGAACTTTGACATCTCTGTGCAGATGAAAAACAAGAGTA---GAAGAGGTGATGT-GGCTGTCTGAAACACTAGGGAAGTATAGTCAGAAAATAAGAAATTGATCCTAGGTGCTTAGTGGTGAAGAGGTTTGGAGAGAAATACTTGGAGATGTAGCTCAGGGAATGGAAAGGGTGAGAGAGCCCAGTAACCAGATTTTACCAGTACTAGCAATACAGTCCGGGAACTGCACT---GGGGCAAGAGCTGTC---------ATAGGA--------TAAATGGAAGACT----AAGAGGTTGATAGTCAGTGGATGCCAGCCTCAAAA-GGTATAGAGATATAGCTAGATTCCACAATTTTCAAAGAAAATATTTTTTGCACCAGGAAG---GAGTAAGTTTGGAATGTGATAAAAGATAAATTGGTAATCGTACTGTAATGTGATCTGAG-ACCCACTAAAAGCAGA-CGTGTGATGGCAACCTATATTTTGCTTACTGGCAATAGGT i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=34490.000000 s hg38.chrUn_GL000218v1 143277 12 + 161147 TTTAAATATCTT s panTro4.chr3 77224927 12 + 202329955 TTTAAATATCTT i panTro4.chr3 I 6198 C 0 s ponAbe2.chr3 42395807 12 + 202140232 TTTAAATATCTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18717 12 - 34861 TTTAAATATCTT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 139854 12 + 192599291 TTTAAACATTTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162360 12 - 192460366 TTTAAACATCTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108973 12 + 187378091 tttaaacatctt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 56939 12 - 101219884 TTTAAACATCTT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28787558 12 - 39895921 TTTTAATATCTT i canFam3.chr31 C 0 C 0 e micMur1.scaffold_84608 875 3868 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=8190.000000 s hg38.chrUn_GL000218v1 143289 2 + 161147 AA s panTro4.chr3 77224939 2 + 202329955 AA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42395819 2 + 202140232 AA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18729 2 - 34861 AA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 139866 2 + 192599291 AA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162372 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108985 2 + 187378091 aa i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 56951 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 4743 2 - 5045 AA i micMur1.scaffold_84608 I 3868 C 0 s canFam3.chr31 28787570 2 - 39895921 AA i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=6552.000000 s hg38.chrUn_GL000218v1 143291 2 + 161147 AA s panTro4.chr3 77224941 2 + 202329955 AA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42395821 2 + 202140232 AA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18731 2 - 34861 AA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 139868 2 + 192599291 AA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162374 2 - 192460366 AA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108987 2 + 187378091 aa i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 56953 2 - 101219884 AA i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 4745 2 - 5045 AA i micMur1.scaffold_84608 C 0 I 211 e canFam3.chr31 28787572 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=484392.000000 s hg38.chrUn_GL000218v1 143293 209 + 161147 ATTACATTTGATATTGTATGattcatcaagacagaaagtaaagctgtagttgccctgggggggtggggaatggggagtcact-tttaatgggtacagtatttcaattttacaagacaaaaagaattatggagatgggtggtggtgatgcttgcacaacattgtgaatacatttagtgacaccgaattgtatacttaacaatggttaagat s panTro4.chr3 77224943 210 + 202329955 TTTGCATTTGATATTGTATGattcatcaagacagaaagtaaagctgtagttgccctgggagggcggggaatggggagtcactgtttaatgggtacaggatttccattttacaagacaaaaagaattatggagatgggtcgtgatgatgcttgcacaacattgtgaatacatttaataacactgaattgtatacttaacagtggttaagat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42395823 210 + 202140232 ACTGCATTTGATATTGTATGACTCTTCAagacagaaagtaaagctttagttgccctgggagggcaaggaatggggagtcactgtttaatgggtacaggatttcaattttacaagacaaaaagaattatggagatgggtggtggtgatgcttgcacaacattgtgaacacatttaataacactgacttgtatacttaacagtggttaagat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18733 210 - 34861 ATTGCATTTGATATTGTATGattaatcaagacagaaagtaaagctgtagttgccctgggagggcggggaatggggagtcactgtttaatgggtacaggatttcaattttacaagacaaaaagaattttggacatgggtggtggtgatgcttgcacaacattgtgaatacatttaataacactgaattgtatacttaacagtggttaagat i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 139870 208 + 192599291 ATTCCATTTGATACTGTATGattcatcaagacagaaagtaaagcggtagttgccctgggagggcggggaatggggagtcactgtttaatgggtacaggatttcaactttacaaaacaaaa--aattatggacatgggtggtggtgatgcttgcacaacgttgtgaatacatttaataacactgaattgtagacttaaaagtggttaagat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162376 208 - 192460366 ATTCCATTTGATACTGTATGattcatcaagacagaaagtaaagcggtagttgccctgggagggcggggaatggggagtcactgtttaatgggtacaggatttcaactttacaaaacaaaa--aattatggacatgggtggtggtgatgcttgcacaacgttgtgaatacatttaataacactgaattgtagacttaaaagtggttaagat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 108989 208 + 187378091 attCCATTTGATACTGTATgattcatcaagacagaaagtaaagCGGTAGTTGCCCTGGGAGGGCGGGGAATGGGGAGtcactgtttaatgggtacaggatttcaactttacaaaacaaaa--aattatggaGATGGGTGGTGGCGATgcttgcacaacattgtgaatacatTTAATAACACTGAATTGTAGACTTAAAAGTGGTTAAGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 56955 208 - 101219884 ATTCCACTTGATACCGTATGattcatcaagacagaaagtaaagcggtagttgccctgggagggtggagaatggggagtcactgtttaatgggtacaggatttcaattttacaaaacaaaa--aattatggggatgggtggtggtgatgcttgcacaacattgtgaatacatttaataacactgaattgtagacttaaaagtagttaagat i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28787572 0 - 39895921 C e micMur1.scaffold_84608 4747 211 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=3600.000000 s hg38.chrUn_GL000218v1 143502 1 + 161147 g s panTro4.chr3 77225153 1 + 202329955 g i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42396033 1 + 202140232 g i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18943 1 - 34861 g i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 140078 1 + 192599291 g i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162584 1 - 192460366 g i macFas5.chr2 C 0 C 0 s papAnu2.chr2 109197 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 57163 1 - 101219884 g i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 4958 1 - 5045 g i micMur1.scaffold_84608 I 211 I 9 e canFam3.chr31 28787572 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=12992.000000 s hg38.chrUn_GL000218v1 143503 5 + 161147 caaat s panTro4.chr3 77225154 5 + 202329955 caaat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42396034 5 + 202140232 caaat i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18944 5 - 34861 caaat i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 140079 5 + 192599291 caaat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162585 5 - 192460366 caaat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 109198 5 + 187378091 CAAAT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 57164 5 - 101219884 caaat i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28787572 0 - 39895921 C e micMur1.scaffold_84608 4959 9 - 5045 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=3276.000000 s hg38.chrUn_GL000218v1 143508 1 + 161147 t s panTro4.chr3 77225159 1 + 202329955 t i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42396039 1 + 202140232 t i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18949 1 - 34861 t i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 140084 1 + 192599291 t i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162590 1 - 192460366 t i macFas5.chr2 C 0 C 0 s papAnu2.chr2 109203 1 + 187378091 T i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 57169 1 - 101219884 t i chlSab2.chr22 C 0 C 0 s micMur1.scaffold_84608 4968 1 - 5045 t i micMur1.scaffold_84608 I 9 N 0 e canFam3.chr31 28787572 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=138481.000000 s hg38.chrUn_GL000218v1 143509 60 + 161147 gttgagtgtgttttgccacaattaaaaaaCAGAAAACAATAGTATTTGAAGATATAGCCC s panTro4.chr3 77225160 60 + 202329955 gttgagtgtattttgccacaattaaaaaaTGGAAAACAATAGTATTTGAAGATATAGCCC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42396040 58 + 202140232 gttgagtgtattttgccacaattaaaaaaTGGAAAACAATAGTATTTGAAG--ATAGCCC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 18950 60 - 34861 gttgagtgtattttgccacaactaaaaaaTGGAAAACAATAGTATTTGAAGATAAAGCCC i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 140085 60 + 192599291 gttgagtgtattttgccacaataaaaaaaTGAAAAACAATAATGTTTGAAGATATAGCCC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162591 60 - 192460366 gttgagtgtattttgccacaataaaaaaaTGAAAAACAATAATGTTTGAAGATATAGCCC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 109204 60 + 187378091 GTTGagtgtattttgccacaataaaaaaatgaaaaacaataatgtTTGAAGATATAGCCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 57170 60 - 101219884 gttgagtgtattttgccacaataaaaaaaTGGAAAACAATAATGTTTGAAGATATAGCCC i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28787572 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=3066258.000000 s hg38.chrUn_GL000218v1 143569 1153 + 161147 ATTTCATCTGGTAGCTAGCTGTATGTGTCTGCTCAGCTGTGGATAGATATTTATGCTGTTTCTGAACTGGAGGTTACTGGTATTCTCTAAGGTATAGGAAAATTGATCTTATGTGGCTAACTGAGGTGGATATAGTTGTATCAGTCAGACAGTAATGA---TATAATCATGATAGTTTACATTTAACACAACTTACATGTGTTATACTTTAGAAAGCACTTCATAGATATTATTACTTCATACCATTTTCCCCTTACCATATTTGTCTCTCCTTTC--------------TCTGCTGACTTCACAAAATGTCTGTTCC--ACACTACTCAGTTCATCTCCTTATTT-TGTCAAAA----------TTTTAAGTATCAGAGTCTCC----AAAAAAA------AATTCCAGAAAAGTCTCATCAGCTTTCGGTCATTGATTAATCGATGCTCTTAGAGGGTTTCCCTTCCCCTTCTCAATTTAACATAGCTTCCCAATTCACTTGCCAGTAAAACAAAGTGGTTTATATGGTTTTGTATTTCTTCCTGCTGAA-TTATGAACATTTTTTCATATTGACATTGATTTCCATCTGGCCATGAAATACTCAAGGTGAAGACAATGAAACAAAattgttaatatttatcaagagccaggtactgttttcagtgtcctagaagcataaactagtgtaatgctcaccagctcatatgagaggcaaaaatggatgaaactataaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactgaggatatgaactagattttgacttcaggctgtttaccccagaacctgtgctttcaaccgtcatttgtactgCTTCCCTAAATTACACTTGAGTACACTGTGACAtcaaatttcacctatgacactgattatctggggaactttgcaacttattctgaatatgactcagttttcttttctgtacagaggtaaagtcagtatatactccatagatttgttataaggattata-----tgacacaagagaaggctttaaaaggacttggaaagcaataagcTTTTTTGTTTTCAATCATTTTTCAATAGGTTATCAGTGTTGTGAATGGTTCATGAAAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGTTGTTTAATAGTGT---GTTTAATATTAATATAATAGTAACAAAT s panTro4.chr3 77225220 1153 + 202329955 ATTTCATCTGGTAGCTAGCTGTATGTGTCTGCTCAGCTGTGGATAGATATTTATGCTGTCTCTGAACTGTAGGTTACTGGTATTCTCTAAGGTATAGGAAAATTGATCTTATGTGGCTAACTGAGGTGGATATAGTTGTATCAGTCAGACAGTAGTGA---TATAATCATGATAGTTTACATTTAACAGAATTTACTTGTGTTATACTTTAGAAAGCACTTCATAGATATTATTACTTAATACCATTTTCCCCTTACCATATTTGTCTCTCCTTTC--------------TCTGCTGACTTCAGAAAATGTCTGTTCT--ACACTACTCAATTCATCTCCTTATCTGTGTCAAAA----------TTTTAAGTCTCAGAGTCTCC----AAAAAAA--------TTCCAGATAA-TCTCATCAGCTTTTGGTCATTGATTAATCGATGCCCTTAGAGGCTTTCCCTTCCCTTTCTCAATTTAACATAGCTTCCAAATACACTTGCCAGTAAAACAGAGTTGTTTATATGGTTTTGTATTTCTTCCTGTTGAA-TTATGAACATTTTTTCATATTGACATTGATTTCCATCTGGCCATGAAATACTCGAGGTGAAGAAAATGAAACAAAATGGTTAATATttatcaagagccaggtactgttttaagtttcctagaagcataaactagtgtgatgctcaccagctcatatgagaggcaaaaatggatgaaactataaaaccaagtcacagag--ttaagggaaatttcccaagatcacacagccactaaggatatgaactagattttgacttcaggctatttaccccagagcctgtgctttcaaccatcatttgtactgCTTCCCTAAATTATACTTGActagactgtgacatcaaatttcacctatgacactgattatctggggaactctgcaacttattctgaatatgactcagttt-cttttctgtacagagataaagtcagtatatacctcatagattcgttataaggattataagaaatgacacgtgagaaggctttaaaaggacttggaaagcaataagcTTTTTTGTTTTCAGTCATTTTTCAATAGGTTATCAGTGTCATGAATGGTTCATGATAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGTTGCTTAATAGTGT---GTTTAATATTAATATAATAGTAATAAAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42396098 1145 + 202140232 ATTTCATCTGGTAGCTAGCTGTATGTGTCTGCTCAGCTGTGGATAGATATTTATGCTGTCTCTGAGCTGGAGGTTACTGGTATTCTCTAAGGTATAGAAAAATTGATCTTATGTGGCTAACTGAGGTGGATATAGTTGTATCAGTCAGGCAGTAATGA---TATAATCATGATAGTTTATATTTAACACAATTTACATGTGTTATACTTTAGAAAGCACTTCATAGTTATTATTACTTAATACCATTTTCCCCTTACCATATTTGTCTCTCCTTTC--------------TCTGCTGACTGCAGAAAATGTCTCTTCC--ACACTACTCAATTCATCTCCTTATCTTTGTCAAAA----------TTTTAAGTCTCAGAGTCTCC----AAAAAAA-------ATTCCAGACAAGTCTCATCAGCTTTCAGTCATTGATTAATCAATGCCCTTAGAGGCTTTCCCTTCCCCTTCTCAATTTAACATAGCTTCCAAAAACACTTGCCGGTAAAACAAAGTTGTTTATATGCTTCTGTATTTCTTCCTGTTGAA-TTATGAACATTTTTTCATATTGACATTGATTTCCATCTGGCCATG-AATACTCAAGGTGAAGAAAATGAAACAAAATGGTTAATATttatcaagagccaggtactgttttaagtgtcctagaagcataaactagtgtgatgctcaccagctcatatgagaggcaaaaatggatgaaactataaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactaaggctgtgaactagattttgacttcaggctatttaccccagagcctgcgctttcaaccatcatttgtactgCTTCCCTAAATTATACTTGActagactgtgacatcaaatttcacctatgacactgaatatcaggggaactttgcaacttattctgaatacgactcagttttcttttctgtacagagataaagtcagtatataccccatagattcattataaggattatatgaaatgacacatgagaaggctttaaaaggacttggaaaacaataagcTTTTTTG-----------TTTTCAATAGGTTATCAGTGTTGTGAATGGTTCATGAAAAATGACTTTGGGCTCACTGAGTAACTGAAATGTTGATGCTTAATAGTGT---GTTTAATATTAATATAAAGGTAATAAA- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 19010 1153 - 34861 ATTTCATCTGGTAGCTAGCTGTATGTGTCTGCTCACCTGTGGATAGATATTTATGCTGTCTCTGAACTGGAGGTTACTGGTATTCTCTAAGGTATAGGAAAATTGATCTTATGTGGCTAACTGAAGTGGGAATAGTTGTATCCATCAGACAGTAATGA---TATAATCATGATAGTTTACATTTAACACAATTTACATGTGTCATACTTTCGAAAGCACTTCATAGATATTATTACTTAATACCATTTTCCCCTTACCATATTTGTCTGTCCTTTC--------------TCTGCTGACTTCAGAAAATGTCTCTTCC--ATACTACTCAATTCATCTCCTTATCTTTGTCACAA----------TTTTAAGTCTCAGAGTCTCC----AGAAAA---------TTCCAGACAAGTCTCATCAGCTTCCAGTCATTGATTAATCGATGCCCTTAGAGGCTTTCCCTTCCCTTTCTCAATTTAACATAGCTTCCAAATATACTTGCCAGTAAAACAAAGTTGTTTATAAGGTTTTGTATTTCTTCCTGTTGAA-TTATGAACATTTTTTCATATTGACATTGATTTCCATCTGGCCATGAAATACTCAAGGTGAAGAAAATGATACAAAATGGTTAAAATGTATCAAGAgccaggta--gttttaagtgtcctagaagcataaactagtgtgatgctccccagctcatatgagaggcaaaaatggatgaaacgataaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactaaggatatgaactagattttgacttcaggctacttaccccagagcctgtgctttcaaccatcatttgtactgCTTCCCTAAATTACACTCaactagactgtgacatcaaatttcacctatgacactgattatctggggaactttgcaacttattctgaatatgactcagttttcttttctgtgcagagataaagtcagtatatacctcatagattcgttataaggattatatgaaataacacatgagaaggctttaaaaggacttggaaagcaataagcTTTTTTGTTTTCAATCATTTTTCAATAGGTTATCAGTGTTGTGAATGGTTCATGAAAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGATGCTTAATAGTGT---GTTT-ATATTAGTATAATAGTAATAAAT i nomLeu3.chrUn_GL397991_1 C 0 M 288 s rheMac3.chr2 140145 1163 + 192599291 ATTTCATATGATAGCTAGCTGTATGTGTCTGCTCAACTGTGAATAGATATTTATGCTCTCTCTGAACTGGAGGTTATTGCTATTCTCTAAGGTATAGAAAAATTGTTCTTATGTGGCCAAGTGAGGTTGATATAGTTGTATCAGTCAGACAGTAATGATATTATAATCATGATAGTTTACATTTAACACAATTTACATGTGTTATACTTTAGAAAGCACTTCATAGATATTATTACTTAATACCATTTCCCCCTTACCATATTTGTCTCTCCTTTC--------------TCTACTGACTTCAGAAAATGTCTCTTCC--ACATTACTCAATTCATCTCCTTATCTTTGTCAAAA----------TTTTAAGTCTCAGAGTCTCC----AAAAAAAAAAAAAAATTCCAGACAAGTGTCATCAGCTTTCAGTCATTGATTAATCAGTGTCCTTAGAGGCTTTCCCTTCCCCGTCTCAATTTAACACGGCTTCCAAATACACTTGCCAGTAAAACAAAGTTGTTTATATGGTTTTGTATTTCTTCCTGTTGAA-TTATGAACATTTATTCATATTGACATTGATTTCAATCTGGCCATGAAATACTCAAGGTGAAGAAAATGATACAAAATGGTCAATATttatcaagagccaggtacagttttaagtgtcttagaagcataaacaagtgtgatgctcagcagctcacatgagaggcaaaaatggatgaaactataaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactaaggatatgaactagattttgacttcaggctgtttaccccagagcctgtgctttcaaccatcatttgtactgCTTCCCTAAATTATACTTGActagactgtgacatcaaatttcacctatgacactgattattt-gggaactttgcaacttattctgtatatgactcagttttcttttctgtgcagagataaagttggtatatacctcatagattcattataaggattatatgaaatgacacatgagaaggctttaaaaggacttggaaagcaataagcTTTTTTGTTC----TCATTTTTTAATAGGTTATCAGTGTTGTGAATGGATTATGAAAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGATGCTTAATAGTGT---GCTTAATATTAACATAATAGTAATAAAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 162651 1163 - 192460366 ATTTCATATGATAGCTAGCTGTATGTGTCTGCTCAACTGTGAATAGATATTTATGCTCTCTCTGAACTGGAGGTTATTGCTATTCTCTAAGGTATAGAAAAATTGTTCTTATGTGGCCAAGTGAGGTTGATATAGTTGTATCAGTCAGACAGTAATGATATTATAATCATGATAGTTTACATTTAACACAATTTACATGTGTTATACTTTAGAAAACACTTCATAGATATTATTACTTAATACCATTTCCCCCTTACCATATTTGTCTCTCCTTTC--------------TCTACTGACTTCAGAAAATGTCTCTTCC--ACATTACTCAATTCATCTCCTTATCTTTGTCAAAA----------TTTTAAGTCTCAGAGTCTCC----AAAAAAAAAAAAAAATTCCAGACAAGTGTCATCAGCTTTCAGTCATTGATTAATCAGTGTCCTTAGAGGCTTTCCCTTCCCCGTCTCAATTTAACACAGCTTCCAAATACACTTGCCAGTAAAACAAAGTTGTTTATATGGTTTTGTATTTCTTCCTGTTGAA-TTATGAACATTTATTCATATTGACATTGATTTCAATCTGGCCATGAAATACTCAAGGTGAAGAAAATGATACAAAATGGTCAATATttatcaagagccaggtacagttttaagtgtcttagaagcataaacaagtgtgatgctcaccagctcacatgagaggcaaaaatggatgaaactataaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactaaggatatgaactagattttgacttcaggctgtttaccccagagcctgtgctttcaaccatcatttgtactgCTTCCCTAAATTATACTTGActagactgtgacatcaaatttcacctatgacactgattattt-ggaaactttgcaacttattctgtatatgactcagttttcttttctgtgcagagataaagttggtatatacctcatagattcattataaggattatatgaaatgacacatgagaaggctttaaaaggacttggaaagcaataagcTTTTTTGTTC----TCATTTTTTAATAGGTTATCAGTGTTGTGAATGGATTATGAAAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGATGCTTAATAGTGT---GCTTAATATTAACATAATAGTAGTAAAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 109264 1171 + 187378091 ATTTCATATGATAGCTAGCTGTATGTGTCTGCTCAACTGTGAATAGATATTTATGCTCTCTCTGAACTGGAGGTTATTGCTATTCTCTAAGGTATAGAAAAATTGTTCTTATGTGGCCAAGTGAGGTTGATATAGTTGTATCAGTCAGACAGTAATGATATTATAATCATGATAGTTTACATTTAACACAATTTACATGTGTTATACTTTAGAAAGCACTTCATAGATATTATTACTTAATACCATTTCCCCCTTACCATatttgtctctcctttc--------------tctactGACTTCAGAAAATGTCTCTTCC--ACATTACTCAGTTCATCTCCTTATCTTTGTCAAAA----------TTTTAAGTCTcagagtctccaaaaaaaaaaaaaaaaaaattccagacaaGTGTCATCAGCTTTCAGTCATTGATTAATCGATGTCCTTAGAGGCTTTCCCTTCCCCGTCTCAATTTAACATAGCTTCCAAATACACTTGCCAGTAAAACAAAGTTGTTTATAtggttttgtatttcttcctgttgaa-ttATGAACATTTATTCATATTGACATTGATTTCAATCTGGCCATGAAATACTCAAGGTgaagaaaatgatacaaaatggTCAATATTTATCAAGAACCAGGTACAGTTTTAAGTGTCTTAGAAGCATAAACAAGTGTGATGCTCACCAGCTCACATGAGAGGCAAAAATGGATGAAACTATAAAACCAAGACACAGAGAGTTAAGGGAaatttcccaagatcacacagccactAAGGATATGAACCAGATTTTGACTTCAGGCTGTTTACCCCAGAGCCTGTGCTTTCAACCATCATTTGTAGTGCTTCCCTAAATTATACTTGACTAGACTGTGACATCAAATTTCACCTATGACACTGATTATTT-GGGAACTTTGCAACTTATTCTGTATatgactcagttttcttttctgtgcagaGATAAAGTTGGTATATACCTCATAGATTCATTATAAGGATTATATGAAATGACACATGAGAAGGCTTTAAAAGGACTTGGAAAGCAATAAGCTTTTTTGTTCTCAATCATTTTTTAATAGGTTATCAGTGTTGTGAATGGATTATGAAAAATGACTTTGGGCTCAGTGAGTAACTGAAATGTTGATGCTTAATAGTGt---gcttaatattaatataatagtaataaat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 57230 1156 - 101219884 ATTTCATATGACAGCTAGCTGTGTGTGTCTGCTCAGCTGTGAATAGATATTTATGCTCTCTCTGAACTGGAGGTTATTGCTATTCTCTAAGATACAGAAAAATTGTTCTTATGTGGCCAAGTGAGGTTGATATAGTTGTATCAGTCAGACAGTAATGATATTATAATCATGATAGTTTACATTTAACACAATTTACTTGTGTTATACTTTAGAAAGCACTTCATAGATATTATTACTTAATACCATTTTCCCCTTACCATATTTGTCTCTCGTTTC--------------TCTGCTGACTTCAGAAAATGTCTCTTCC--ACATTACTCAATTCATCTCCTTATCTTTGTCAAAA----------TTTTAAGTCTCAGAGTCTCC---AAAAAAAAAAAAAAAATTCCAGACAAGTCTCATCAGATTTCAGTCATTGATTAATCGATGTCCTTAGAGGCTTTCCCTTCCCCTTCTCAATTTAACATAGCTTCCAAATACACTTGCCAGTAAAACAAAGTTGTTTATATGGTTTTGTATTTCTTCCTGTTGAA-TTATGAACATTTATTCATATTGACATTGATTTCAATCTGGCCATGAAATACTCAAGGTGAAGAAAATGATACAAAATGGTCAATATTTATCAAGAGCCAGGTATAGTGT---GTGTCCTAGAAGCATAAACAAGTGTGATGCTCACCAGCTCACATGAGAGGCAAAAATGGATGAAACTATAaaaccaagacacagagagttaagggaaatttcccaagatcacacagccactaaggatatgaactagattttgacttcaggctgtttaccccagagcctgtgctttcaaccatcatttgtactgCTTCCCTAAATTATACTTGActagactgtgacatcaaatttcacctatgacactgattatctggggaactttgcaacttattctgtatatgactcag-----ttttctgtacagagataaagtcagtatatacctcatggattcattataaggattatatgaaatgacacatgagaaggctttaaaaggacttggaaagcaataagcTTTTTCTCAA----TCATTTTTTAACAGGTTATCAGTATTGTGAATGGATTATGAAAAATGACTTCGGGCTCAGTGAGTAACTGAACTGTTGATGCTTAATAGTGT---GCTtaatattaatataatagtaataaa- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28787572 1129 - 39895921 ATTTCACCCAA----TAGCTGTGAGGGTCTACTCAGCTGTGGACAGAGGTTGCTGATACCTCTGA-TTAGATATTATTGGTATTCTTTGAGGCAT-GGGAAATTGATCTCACATGGCCAAGTGATATGGCTG-GGGTGCATTAGCCAGGGaataataatattataattgtaataatttaCATACAGCCGATTTTACATGTGTTACCCTTTAGAAAGCACTTCAAATACATTTTTACTTTATATTGTTTT-CCTTTACTGTATTTGTCTTTCTTGTTATTGAACAAGAATACTTGCTGATTTCAGAAAATGTCTTTTCCCAACATTATTCAA-TCATCTCCTTCCCTTTGTCAAAACTTTTTTTTTTTTTAAGACTTAGGATCTCC----AACAGAA------TATTTCTAACAAGCCTCATGAGTTTCCAGTCGCTGATTCACCGTTGTGAT------CTCATCCTTCCCCTTCTCAATTTAACAGAGCTTTCAAATGTGCTTTACAGTCAAATAGAATTGTTTCTATGGTTTTGCATTTCTTCCTGGTGCCTTTATAACCATTTATTCATCTTGACATTGATTTCTATCAGACCATAAGCTATACAAGGTGAAGAAAATGGTACAAGATGACTAATATTTGTCAAAAGCCAGCTACTGTTGTAAGTAT----------------AGTGTAAT----AGCAGCCCATAAGAGAGGGACAAACTGATGCATATGTAaaactaaggcacagagaggtaagggaaatttcccagaattgcacagctgccaaagggaggaggtaaaatt--------------ttaatcaagagcctatgctttcaaccataattt-tgct-cttctcttaattatactttactatCCTGtgacttcaaatatcaacaatgtcactgattatccaagtgttattacaacttactatctataagactcaattttcttctctgtggaattataaaatcagtatatatctcataaatttattataaggattgcataaaatcacacatgtaaaggctttagaaggaattagaagatggtaagctcttaT-----------TTTCTCAATAGTATATCAATGTCATATACAGTTGATGTTAAGTGAGTTTTGGCTCAATAAATGAAT-AAATGTTAATGGTTAACAGTATTCAATGTATTATTAATATAACATTAATAAAT i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=14007.000000 s hg38.chrUn_GL000218v1 144722 11 + 161147 GTTGTTATTGT s panTro4.chr3 77226373 11 + 202329955 GTTGTTATTGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42397243 9 + 202140232 --TGTTATTGT i ponAbe2.chr3 C 0 C 0 s rheMac3.chr2 141308 11 + 192599291 GTTGTTATTGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 163814 11 - 192460366 GTTGTTATTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 110435 11 + 187378091 gttgttattgt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 58386 9 - 101219884 --tgttattgt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28788701 1 - 39895921 ---------G- i canFam3.chr31 C 0 C 0 e nomLeu3.chrUn_GL397991_1 20163 288 - 34861 M e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=173360.000000 s hg38.chrUn_GL000218v1 144733 78 + 161147 TGAGTAATAGTTATTTGGCTTTT-CGCTGCTTTTCTTTTCTAGTGTTTTAG--------TCAGAGACTTCTT-AAGTC-TCTTCAAGTG s panTro4.chr3 77226384 75 + 202329955 TGAGTAATAGTTATTTTTCTTTT-CACTGCTTTTCTTTCCCAGTGTTTTAG--------TCAGAGACTT----AAGCC-TCCTCAAGTG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42397252 79 + 202140232 TGAGTAATAGTTATTTTGCTTTTCCCCTGTTTTTCTTTTCCACTG-TTTAG--------TCAGAGACTTCTT-AAGCCTTCCTCCAGAG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 20460 76 - 34861 TGAGTAATAGT--ATTTGCTTTT-CACTGCTTTTCCTTTCCAGTGTTTTAG--------TCAGAGACTTCTT-AAGCC-TCCTCGAGAG i nomLeu3.chrUn_GL397991_1 M 288 C 0 s rheMac3.chr2 141319 77 + 192599291 TGAGTAATAGTTATTTTGCTTTC-C-CTGCTTTTCTTTTCCAGTGTTTTAG--------TCAGAGACTTCTT-AAGTC-TCCTCAAGAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 163825 77 - 192460366 TGAGTAATAGTTATTTTGCTTTT-C-CTGCTTTTCTTTTCCAGTGTTTTAG--------TCAGAGACTTCTT-AAGTC-TCCTCAAGAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 110446 78 + 187378091 tgagtaATAGTTATTTTGCTTTT-CACTGCTTTTCTTTTCCAGTGTTTTAG--------TCAGAGACTTCTT-AAGTC-TCCTCAAGAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 58395 78 - 101219884 tgagtaatagttatTTTGCTTTT-CACTGCTTTTCTTTTCCAGTGTTTTAG--------TCAGAGACATCTT-AAGTC-TCCTCAAGAA i chlSab2.chr22 C 0 I 164 s canFam3.chr31 28788702 80 - 39895921 -------TAGTTATTTCACTATT-GACTGATATTCATTCTTAGTGTTTTTGGTCTTTGTCCAGAGACTTTTTAAAATC-TTTTCAAGAG i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=81452.000000 s hg38.chrUn_GL000218v1 144811 28 + 161147 TGTACACATTTCTTAAATTTGTTGGAAA s panTro4.chr3 77226459 28 + 202329955 TGTACACATTTCTTAAATTTGTTGAAAA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42397331 28 + 202140232 TGTACCCATTTCTTAAATTTGTTGGAAA i ponAbe2.chr3 C 0 I 938 s nomLeu3.chrUn_GL397991_1 20536 28 - 34861 TGTACACATTTCTTAAATTTGTTGGAAA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 141396 28 + 192599291 TGTACACATTTCTTAAATTTGTTGGAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 163902 28 - 192460366 TGTACACATTTCTTAAATTTGTTGGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 110524 28 + 187378091 TGTAcacatttcttaaatttgttggAAA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 58637 28 - 101219884 TGTACACATTTCTTAAATTTGTTGGAAA i chlSab2.chr22 I 164 C 0 s canFam3.chr31 28788782 27 - 39895921 TGTATACATTTCTCAAG-TTGATGGAAG i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2553235.000000 s hg38.chrUn_GL000218v1 144839 1268 + 161147 GTACCAAATTT---AAGATATCTTGC-TTTTTTTCTTCCTTAGTAAACACTAAATTCCATCACGCAGCAGAAAAAGGGCTCTGTTATTGTCGGTACAATGGTTTAATATTCACTTTTATTCCCTATATCATAGTTCTGATTTAATTACTATTTAGAATAAAACTTGTTC------CTT-----ATTATA-------------TGCATTCATAATTATAAAATTTGTGTTTTAATGCCTTCTACAAATATACTGTGCTTTTCTTTATTTCCTTATATCTTTTACTGTTGCATGATCCTGGTATTTGAAATCTCATTAAGTGTTGTTTGGGG-ATTTGCTGGGAATGTCGTCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAAACATAATAGGAGATGGAATTCACAGCAGAGTAATAAGCCTCCCACTTTAGGCAATATATTTGTGATTGACATGACTTTATTCCCAGAGGGCAGTTAGCAACACAATATTATGGCTATGTGTACAAGGA---------------AAACAAA---------------------------------------TTTTAAAAATCT--------------------------CCTTT-----------------------------------------------------------------------AAAAAAAA--------------------ACAGTTCCCAATCCTAACCAGT----ATCATGCACAGAATCC---------------GTTTCCACCTCTTCATATGGAAGCAGCTCTGGGTGGACATCTAGAAAGTTGGATAACTATTTATCACATATGATCTGCAAAGGGAGAGA-TTTACAAGAAAGTATTAAATTTGATCCATAGGAAAGCAAAATC-AAAAATCAATGAATTTTCCATTTGTAGTTTTCCCTAAGGGCTCTACTCTCAAGATGGCTTAAATGCATTAGAATTCAATGACTAGGCACAAT--TGTTTGTTAGTGACATAAAAGCAAGGTAAGCATTTCTGCTTTATGAGTCCAAGCACAGGGACACTTGGTTTTCTTTGGAAGGATATCATAAAGGCAATGTTTA-TGAGTAATCCCTCATTGTCTTTTCTTCTGTAGCATTCAATGCTATG----TACTAAAATTTAGAAATGAAAACTACTTAAAGA----CCACCTGCT--AAGTTTCATGCATTTCAAATTCTCAGATCCTGAGTGTTTAAATATGTCTGTATTTCTTCATGAAAAAAACATAATCTTTGCCAAGTTAGAAAAAGAAAAACTCATATTCCCATTTTTAACTAAAGGTAATCAGAAATTTGGACAGTTTTTAGCCTTCAATACATTATGTAATTTGGGTAACAGGCTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTATTTCTAAGACTCAAATGTAT---AGAACAGATCTCTGATATTAAGGATAAGACCCTCAAAGGTGAC s panTro4.chr3 77226487 1295 + 202329955 GTACCAAATTT---AAGATATCTTGCATTTTTCTCTTCCTTAGTAAACACTAAATTCCATCACGCAGCAGAAAAAGGGCTCTGTTATTGTTGGTACAATGGTTTAATATTCACTTTTATTCCCTGTGTGGTAGTTCTGATTTAATTGCTATTTAGAATAAAACTTGTTCTTATTGCTTTCATAATTATAAAATAGTTATAATTGCTTTCATAATTATAAAATTTGTGTTTTAATGCCTTCTACACATATACTGTGCTTTTCTTTATTTCCTTATATCTTTTACTGTTTCATAATCCTGGTATTTGAAATCTCATTAAGTGTTATTTGGGG-ATTTGCTGGGAATGTCATCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAAACATAATAGGAGATGGAATTCACAGCAGAGTAATAAGCCTCCTGCTTTAGACAATGTATTTGTGATTGGTATGACTTTGTTCCCAGAGG-CAGTTAGCAACACAATATTATGGCTATGAGTACAAGGA---------------AAACAAACAAA----------------------------------TTCTTTAAAATCT--------------------------CCTTT-----------------------------------------------------------------------AAAAAAA----------------------CAGTGCCCGAGCCTAACCAGT----ATCATGCATGGAATCC---------------ATTTCCACCTCTTCATATGGAAGCAGCTCTGGGTGGACATCTAGAAAGTTGGATAACTATTTATCACATATGGTCTGCAAAGGGAGAGA-TTTATAAGAAAGTGTTAAATTTAATCCATAGGAAAGCAAAATC-AAAAATCAATGAATTTTCCATTTGTAGTTTTCTCTAGGGGCTCTACTCTCAAGATGGCTTAAATGCATTAGAATTCAATGACTAGGCACAAG--TGTTTGTTAGTGACATCAAAGCAAGGTAAACATTCCTGCTCTATGAGTCCAAGCACAGGGACACTTGGTTTTCTTTGGAAGGATATCATAAAGGCAATGTTTA-TGAGTAATCTCCCATTGTCTTTTCTTCTGTAGAATTCAATGGTATG----TACTATAATTTAGAAACAAAAACTACTTAAAGA----CCACTTGCT--AAGTTTCATGTATTTCAAATTCTCAGATCCTGAGTGTTTAAATATGCCTATATTTCTTCATGAAAAAAAAATAATCTTTGCCAAGTTAGAAAAAGAAAAAGTCATATTCCCATTTTTAACTAAATGTAGTCAGAAATTTGGACAGTTTTTAGCCTTCAATACATTATGTAATTTGGGTAATAGGCTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAACTAGT--AATTGTTTCTAAGACTCAAATGTAT---AGAACGGATCTCTGATAATAAGGATAAGACCCTCAAAGGTGAC i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 20564 1259 - 34861 GTACCAAATTT---AAGATATCTTGTATTTTTTTCTTCCTTAGTAAACACTAAATTCTATCACGCAGCAGAAAAAGGGCTCTGTGATTGTCGGTACAATGGTTTAATATTCACTTTTATTCCCTGTATGGTAGTTCTGATTTAATTGCTATTTAGAATAAAACTTGTTC------CTT--------ATA-------------TGCTTTCATAATTATAAAATTTATGTTTTAATGCCTTCTACACATATACTGTGCTTTTCTTTATTTCTTTATATCTCTCACTGTTTCATTATCCTGGTATTTGAAATCTCATTAAGTGTTATTTGGGG-ATTTGCTGGGAATGTCATCTAAATAGTTATGTCTCAAGTTTGTAGCATCTTTAAAACATAATAGGAGACGGAATTCACAGCAGAGTAATAAGCCTCCCGCTTTAGGCAATGTATTTGTGATTGGTATGACTTCGTTCCCAGAGGGCAGTCAGCAACACAGTATTATGGCTATGTGTACAAGGA---------------AAACAAACAAA----------------------------------TTTTTAAAAATCT--------------------------CCTTT-----------------------------------------------------------------------AAAAAAA---------------------ACAGTGCCCGAGCCTAACCAGT----GTCATGCACAGAATCC---------------GTTTCCACCTCTTCATATGGAAGTAGCTCTGGGTGGACGTCTAGAAAGTTGGATAACTATTTATCACATATGATCTGCAAAGGAAGAGA-TTTATAAGAAAGTGTTAAATTTAGTCCATAGGAAAGCAAAATC-AAAAATCAATGAATTTTCCATTTGTACTTTTCTCT-GGGGCTCTACCCTCAAGATGGCTTAAATGCATTAGAATTCAGTGACTAGGCACAAG--TGTTTGTTAGTGACATCAAAGCAAGGTAAACATTCCTGCTGTGTGAGTCCAAGCACAGGGACACTTGGTTTCCTTTGGAAGGATATCATAAAGGTAATGTTTA-TGAGTAAT----CATTGTCTTTTCTTCTGTAGCATTCAATGGTATG----TACTATAATTTAGAAACGAAAACTACTTAAAGA----CCACTTGCT--AAGTTTCATGTATTTCAAACTCTCAGATCCTGAGTGTTTAAATATGCCTATATTTCTTCATGAAAAAAACATGATCTTTGCCAAGTTAGAAAAAG------TCATATTCCCATTTTTAACTAAATGTAGTCAGAAATTTGGACAGTTTTTAGTCTTCAATACATTATGTAATTTGGGTAATAGGCTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTGTTTCTAAGACTCAAATGTAT---AGAACAGATCTCTGATATTAAGGATAAGACCCTCAAAGGTGAC i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 141424 1262 + 192599291 GTACCAAATTT---AAGATCTCTTGC-ATTTTTTCTTCCTTAGTAAACGCTATATTCCATCGTGCAGCAGAAAAAGGGTTCTGTTATTGTCAGTACCGTGGTTTAATATTCACTTTTATTCCCTGTATGGTGGTTCTGATTTAATTGCTATTTAGAATAAAACCTGTTC------CTT-----ATTATG-------------TGCTTTTGTAATTACAAAATTTGTGTCTTAATGCCTTCTACACATATACTGTGCTTTTCTTTATTTCCTTTTATCTTTTACTGTTTCATAATCCTGGTATTTGAAATCTCGTTAAGTGTTATTTGGGGAATTTGCTGGGAATGCCATCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAGACACAATAGGAGATGGAATTCACAGCAGAGTAATAAGCCTCCCCCTTTAGGCAATGTATTTGTGATTGGTATGACTTTGTTCCCAGAGGGCAGTTAGCAACACAATATTATGGCTATGTGTACAAGGA---------------AAACAGACACA----------------------------------TTTGTT-TAATCT--------------------------CCTTT-----------------------------------------------------------------------GAAAAAC---------------------ACAGTGCCCCAGCCTAACTAGT----ATCATGCACAGAATCC---------------ATTTCCACCTCTTCTTATGGAAGGAGCGCTGGGTGAACATCTAGAAAGTTGGATAACTATTGATCACATATGATCTGCAGAGGGAGAGA-TTTATAAGAAAGTGCTAAATTTAATCCATAGGAAAGTCAAATC-AAAAATCAATGAATTTTCCATTTGTAGTTTTCCCTAGGGGCTCTACTCTCAAGATGGCTT------ATTAGAATTCAATGACTAGTCACAAG--TGTTTGTTGGTGATATCAAAGCAAGGTAAACATTCCTGCTCTGTGAGTCCAAGCACAGGGACAC-TGGTTTCCTATGGAAGGATATCTTAAAGGCAATGTTTA-TGAGTAATCCCTCATTGTCTTTTCTTCTGTAGCATTCAATGGTATG----TACTATAATTTAGAAACGAAAACTACTTAGAGA----CCGCTTGTT--AAGTTTCATATATTTTGGATTCTCAGACCCTGAGTGTTTAAATATGCCTATATTTCTTCATG-AAAAACCATAAGCTTTGCCAAGTTAGAAAAAG--AAAGTCATATTCCCATTTTTAGCTAAATGTAGTCAGAAATTTGGACAGTTTTTAGCCTTCAATACATTATGTAATTTGGGTAATAGACTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTGTTTCTAAGACTCAAATGTAT---AGAACAGATTTCTGATATTAAGGATAAGACCCTCAAAGGTGAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 163930 1268 - 192460366 GTACCAAATTT---AAGATCTCTTGC-ATTTTTTCTTCCTTAGTAAACGCTATATTCCATCGTGCAGCAGAAAAAGGGTTCTGTTATTGTCAGTACCATGGTTTAATATTCACTTTTATTCCCTGTATGGTGGTTCTGATTTAATTGCTATTTAGAATAAAACCTGTTC------CTT-----ATTATG-------------TGCTTTTGTAATTACAAAATTTGTGTCTTAATGCCTTCTACACATATACTGTGCTTTTCTTTATTTCCTTTTATCTTTTACTGTTTCATAATCCTGGTATTTGAAATCTCGTTAAGTGTTATTTGGGGAATTTGCTGGGAATGCCATCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAGACACAATAGGAGATGGAATTCACAGCAGAGTAATAAGCCTCCCCCTTTAGGCAATGTATTTGTGATTGGTATGACTTTGTTCCCAGAGGGCAGTTAGCAACACAATATTATGGCTATGTGTACAAGGA---------------AAACAGACACA----------------------------------TTTGTT-TAATCT--------------------------CCTTT-----------------------------------------------------------------------GAAAAAC---------------------ACAGTGCCCCAGCCTAACTAGT----ATCATGCACAGAATCC---------------ATTTCCACCTCTTCTTATGGAAGGAGCGCTGGGTGAACATCTAGAAAGTTGGATAACTATTGATCACATATGATCTGCAGAGGGAGAGA-TTTATAAGAAAGTGCTAAATTTAATCCATAGGAAAGTCAAATC-AAAAATCAATGAATTTTCCATTTGTAGTTTTCCCTAGGGGCTCTACTCTCAAGATGGCTTAAATACATTAGAATTCAATGACTAGTCACAAG--TGTTTGTTGGTGATATCAAAGCAAGGTAAACATTCCTGCTCTGTGAGTCCAAGCACAGGGACAC-TGGTTTCCTATGGAAGGATATCTTAAAGGCAATGTTTA-TGAGTAATCCCTCATTGTCTTTTCTTCTGTAGCATTCAATGGTATG----TACTATAATTTAGAAACGAAAACTACTTAGAGA----CCGCTTGTT--AAGTTTCATATATTTTGGATTCTCAGACCCTGAGTGTTTAAATATGCCTATATTTCTTCATG-AAAAACCATAAGCTTTGCCAAGTTAGAAAAAG--AAAGTCATATTCCCATTTTTAGCTAAATGTAGTCAGAAATTTGGACAGTTTTTAGCCTTCAATACATTATGTAATTTGGGTAATAGACTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTGTTTCTAAGACTCAAATGTAT---AGAACAGATTTCTGATATTAAGGATAAGACCCTCAAAGGTGAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 110552 1267 + 187378091 GTACCAAATTT---AAGATATCttgc-attttttcttccttagtaaACGCTATATTCCATCATGCAGCAGAAAAAGGGTTCTGTTATTGTCAGTACCATGGTTTAATATTCACTTTTATTCCCTGTATGGTGGTTCTGATTTAATTGCTATTTAGAATAAAACCTGTTC------CTT-----ATTACA-------------TGCTTTCGTAATTACAAAATTTGTGTCTTAATGCCTTCTACACATATACtgtgcttttctttatttccttttatcttttactGTTTCATAATCCTGGTATTTGAAATCTCATTAAGTGTTATTTGGGGAATTTGCTGGGAATGTCATCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAGACACAATAGGAGATGGAATTCACAGCAGAGTAATAAGCCTCCCCCTTTAGGCAATGTATTTGTGATTGGTATGACTTTGTTCCCAGAGAGCAGTTAGCAACACAATATTATGGCTATGTGTACAAGGA---------------AAACAGACACA----------------------------------TTTGTT-TAATCT--------------------------CCTTT-----------------------------------------------------------------------GAAAAAC---------------------ACAGTGCCCCAGCCTAACCAGT----ATTATGCACAGAATCC---------------ATTTCCACCTCTTCTTATGGAAGTAGTGCTGGGTGAACATCTAGAAAGTTGGATAACTATTGATCACATATGATCTGCAGAGGGAGAGA-TTTATAAGAAAGTGCTAAATTTAATCCATAGGAAAGTCAAATC-GAAAATCAATGAATTTTCCATTTGTAGTTTTCCCTAGGGGCTCTACTCTCAAGACGGCTTAAATACATTAGAATTCAATGACTAGTCACAAG--TGTTTGTTGGTGATATCAAAGCAAGGTAAACATTCCTGCTCTGTGAGTCCAAACACAGGGACAC-TGGTTTCCTTTGGAAGGATATCTTAAAGGCAATGTTTA-TGAGTAATCCCTCATTGTCTTTTCTTCTGTAGCATTCAATGGTATG----TACtataatttagaaacaaaaactaCTTAGAGA----CCATTTGTt--aagtttcatatattttggattCTCAGACCCTGAGTGTTTAAATATGCCTATATTTCTTCATG-AAAAACCATAAGCTTTGCcaagttagaaaaag--aaagtcatattCCCATTTTTAGCTAAATGTAGTCAGAAATTTGGACAGTTTTTAGCCTTCAATACATTATGTAATTTGGGTAATAGACTGAATAAAAGTAAGGAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTGTTTCTAAGATTCAAATGTAT---AGAACAGATTTCTGATATTAAGGATAAGACCCTC-AAGGTGAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 58665 1269 - 101219884 GTACCAAATTT---AAGGTATCTTGC-ATTTTTTCTTCCTTAGTAAATGCTATATTCCATCGTGCAGCAGAAAAAGGGTTCTGTTATTGTCAGTACTATGGGTTAATATTCACTTTTATTCCCTGTATGGTGGTTCTGATTTAATTGCTATTTAGAATAAAACCTGTTC------CTT-----ATTATA-------------TGCTTTCATAATTACAAAATTTGTGTCTTAATGCCTTCTACACATATACTGTGCTTTTCTTTATTTCCTTTTATCTTTTACTGTTTCATAATCCTAGTATTTGAAATCTCATTAAGTGTTATTTGGGGAATTTACTGGGAATGTCATCTACATAGTAATGTCTCAAGTTTGTAGCATCTTTAAGACACAATAGGAGATGGAATTCACACCAGAGTAATAAACCTCCCCCTTTAGGCAATGTATTTGTGATTGGTATGACTTTGTTCCCAGAGGGCAGTTAGCAACACAATATTATGGCTATGTGTACAAGGA---------------AAACAAACACA----------------------------------TTTGTT-TAATCT--------------------------CCTTT-----------------------------------------------------------------------GAAAAAC---------------------ACAGCGCCCCAGCCTAAGCAGT----ATTATGCACAGAATCC---------------ATTTCCACCTCTTCTTATGGAAGTAGCGCTGGGTGAACATCTAGAAAGTTGGATAACCATTTATCACATATGATCTGCAGAGGGAGAGA-TTTATAAGAAAGTGCTAAATTTAATCCATAGGAAAGTCAAATT-GAAAATCAATGAATTTTCCATTTGTAGTTTTCCCTAAGGGCTCTACTCTCAAGATGGTTTAAATACATTAGAATTCAATGACTAGTCACAAG--TGTTTGTTGGTGATACCAAAGCAAGGTAAACATTCCTACTCTGTGAGTCCAAGCACAGGGACACTTGGTTTCCTTTGGAAGGATATCATAAAGGCAATGTTTA-TGAGTAATCCCTCACTGTCTTTTCTTCTGTAGCATTCAATGGTATG----TACTATAATTTAGAAACAAAAACTACTTAGAGA----CCACTTGTT--AAGTTTCATATATTTTGGATTCTCAGACCCTGAGTGTTTAAATATGCCTATATTTCTTCATG-AAAAACCATAATCTTTGCCAAGTTAGAAAAAG--AAAGTCATATTCCCATTTTTAGCTAAATGTAGTCAGAAATTTGGACAGTTTTTAGACTTTAATACATTATGTAATTTGGGTAATAGACTGAATAAAAGTAAGAAACTTCAGTTAAATTCAGAGAGAAGCTAGT--AATTGTTTCTAAGACTCAAATGTAT---AGAATATATCTCTGATATTAAGCATAAGACCCTCAAAGGTGAC i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28788809 1444 - 39895921 ------GATTTTTATAGGCATTTTAT-GTTATGCTTTCCTTAGCAAATGCTAAATTTCATCATGCAGAAGAATGAGATTTTTGTTTTTGCTGGTAT-ATGGTTTAATATGTCCTTGTATTCCTTGTGTGGTGGTTTTGATTTAATTGGTGTTAAGAATAAAGTTCACTA------TTT-----ATTATA-------------GGTTTTCACAATTA-AGAATTTGTGTTTTAATATATTCTATACATATACTGTGCTTTTCTTTATTTTCTTAAGTCTTTTACTGTTTCATAATCATGGCATTTGAAATCTCGTAAGATGTTATTTGGGG-GCTTGCTGGAAATGTCATTTACATAGTAATGGCTCAAGTTTGTAGTATCTTTAAAGCATAAAAGGAGATGGACTTCGTAGAAGAGGAATAAACATTTCTTTTTGGGGTATGTATTTGTGATTGGTATGACTCTGCTCCCAGAGGGCAGTCAGCAACACAGAAATATGACTGTGTGTGCAAGGATAAAAATAATAAGTGAAACAAACAAAGAATTCCTTTTGACTTCAACACAGAATTATTATTTTTGTCAGAATCTAAAGTATGTGAATGCTAGACATGTGACCTCTTCATTTAGCTTCACAAGTGGCATAAATTGATAGGATTTTCAAAATATATCTAGGTGAATAATATGAATCCAGAAAAACATTGTTTAAACACACATTTAGAAAGTGCTCTGG-TTGAGCAGTATCAATCAAACAAAGAATCCTTGTTGGGTACAAGGCTCTCTACTTCTTCCTGTGAAAGTAACTCTGGGTGTATACCTAGAAAGTTAAGTGTATATAAATCATACATGACCTACAAAGGGAGATAGTTTAAAAGGAAGTGCTAAATTTAACCCAAAGGAATGCCCAACCAAAAAAACAATAAGCTTTCCATATGTTCTTTTTCTCATGGGTGCTACTCTCAAGATGGCTTAAATGAGTTAGAATTCTATAAATAATTATAAAATTCTTCTTTAGTGATATCCAAGCAAGCTAAATGTTCTTGCTCTGTGAACTCAAGCACAAAAACACACGGTTTCCTTT----GTATATCACAAAGGCAATGTTTACCAAGTAATCAGTTGATTTCCCCCATTTTGT---------TGACATGACTATATCCTACTTTAGAAACTGGAACTACTCAGATAAAATCCACTTGTGTAAAGTTTC-------TCAGAATCTCAGAACGTCAGTGTTTTAATCTGCCTATAGTT-TGCATA-AAAAATCAGGATCTTTGCCTAGTTAGGAAAAGAAAAAAACATATTCCCATTTCCAACTTAATCTAATCAGAAAATTGGAGGG-----AGCCTTCAATATATTATGTAATTCTAGAAATC-ATAGAATACAAGTAAAAAATTTCAGCTAACTTCATAGAGAAGCAAGTGGAAATAATTTTAGGAATAAAATTTATAAAAGAAGAGATCTCTAGTATTAAGGATAAGGACCTTAAAAGTGAT i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42397359 938 + 202140232 I a score=685396.000000 s hg38.chrUn_GL000218v1 146107 252 + 161147 CCAAAGTGGGTAATTGTGGGATTATTTTAGGAGGAATCATCA-TATATTcttactgctataaatacagtcaaatgtcagataaatatactccactgaaatgttttctaggaatgatgttggaaccaatgttggtaatttt--gaaagtcatggagaggatttcagatgatagaagtc-------gggcaaatatcccaggtttaataaataagcaaatgctgagttccaa----------------------agctgctgtatcaatgagcctcatattgatcc s panTro4.chr3 77227782 252 + 202329955 CCAAAATGGGTAATTGTGGGATTCTTTTGGgaggaatcatca-tagactcttactgctataaatacagtcaaatgtcagataaatatactccactgaaatgttttctaggaatgatgttggaaccaatgttggtaatttt--gaaagtcatggagacgatttcagatgatagaagtt-------gggcaactatcccaggtttaataaataagcagatggtgagttccaa----------------------aattgctgtatcaatgaatcttatattgatcc i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42398297 252 + 202140232 CCAAAATGGGTAATTGTGAGATTATTTTGGGAGGAATCATCA-TAGATTCTTACTGTTATAAACACAGTCAAATGTCAGATAAATATACTCCACTGAAATGTTTTCTAGGAATGATGTTGGAACCAATGTTGGTAATTTT--GAAAGTCATGGAGAGGATTTCAGATGATAGAAGTC-------TGGCAACTATCCCAGGtttaataaataagcaaatggtgagttccaa----------------------aaatgctgtatcaatgagccttatattgatcc i ponAbe2.chr3 I 938 C 0 s nomLeu3.chrUn_GL397991_1 21823 252 - 34861 CCAAATTGGGTCATTGTGGGATTATTTTGGGAGGAATCATCA-TAGATTcttactgttataaatgtagtcaaatgtcagatgaatatactccactgaaatttcctctaggaatgatgttgggaccaatgttggtaatttt--gaaagtcatggagaggatttcagatgattgaagtc-------gggcaactatcccaggtttaataaataagcaaacggtgaattccaa----------------------aaatgccgtatcaatcagcctcatattgatcc i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 142686 252 + 192599291 CCAAAATGGGTAATTGTGGGATTATTTTGGGAGGAATCATCA-TAGATTcttactgctgtaaataaagtcaaatgtcagataaatatactccactgaaatgttttctaggaatgatgttggaaccaatgttggtaatttt--gaaagtcatggagaggatttcagatgttagaagtc-------gggcaactatcccaggtttaataaataagcaaatggtgaattccaa----------------------aaatgctgtatcaatgagccttgtattgatcc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 165198 252 - 192460366 CCAAAATGGGTAATTGTGGGATTATTTTGGGAGGAATCATCA-TAGATTcttactgctgtaaataaagtcaaatgtcagataaatatactccactgaaatgttttctaggaatgatgttggaaccaatgttggtaatttt--gaaagtcatggagaggatttcagatgttagaagtc-------gggcaactatcccaggtttaataaataagcaaatggtgaattccaa----------------------aaatgctgtatcaatgagccttgtattgatcc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 111819 252 + 187378091 CCAAAATGGGTAATTGTGGGATTATTTTGGGAGGAATCATCA-TAGATTCTTACTGCTGTAAATAAGGTCAAATGTCAGATAAATATACTCCACTGAAATGTTTTCTAGGAATGATGGTGGAACCAATGTTGGTAATTTT--GAAAGTCATGGAGAGGATTTCAGATGTTAGAAGTC-------GGGCAACTATCCCAGatttaataaataagcaaatggtGAATTCCAA----------------------AAATGCTGTATCAATGAGCCTTGTATTGATCC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 59934 252 - 101219884 CCAAAATGGGTAATTGTGGGATTATTTTGGGAGGAATCATCA-TAGATTcttactgctgtaaataaggtcaaatgtcagataaatatactccactgaaatgttttctaggaatgatgttggaaccaatgttggtaatttt--gaaagtcatggagaggatttcagatgttagaagtc-------gggcaactatcccaggtttaataaataagcaaatggtgaattccaa----------------------aaatgctgtatcaatgagccttgtattgatcc i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28790253 282 - 39895921 CTAAAATGTGTAATTGTGAGTTTTAGTTgcagggagatagcattagattcttattgctataaa--agttcaggtctcagataaatatactggatcaaaaagtcttctagaaatgatagtgaaaacaatgttggtgattttgagagagccatggagaggggttgagatgttagaacccagaagaaaggtaactattcgagcttgaaaaaagaagcaaatggtgaattcCAAATGTCAATTGAAGTTATCAGCTAAAGGCTCAACCACTGAGCCACTCAGGCATCC i canFam3.chr31 C 0 I 381 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=513033.000000 s hg38.chrUn_GL000218v1 146359 201 + 161147 tgagcacaatttcagaaaggtccattaaatgggtctttggagagcacttaggataaaaggctggcagcagagattcac-taagaacaatggtgccaagc-ttgcctctttgacattgttatctgactgat----aaaGGTAGTCTATAGCGGTACACAATACAGATATTTCCAGGGTAAAG---CTGTTGAGCTGCTGTAATTTTCCTTG- s panTro4.chr3 77228034 201 + 202329955 tgagcacaatttcaggaaggtccattaaatgggtcttttgagagcacttaggataaaaggctggcagcagggattcac-taagagcaatggtgccgagc-ttgcctctttgacattgttatctgactgat----aaaGGTAGGCTATAGCGGGACACAATACAGATATTTCCAGGGTAAAG---CTGTTGAGCTGCTGTAATTTTCCTTG- i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42398549 201 + 202140232 tgagcacaatttcaggaaggtccattaaatgggtcttttgagagcacttaggataaaaggctggcagcagggattcac-taagagcattggtgccaagc-tTGCCTCTTTGACATTGTTATCTGACTGAT----AAAGGTAGGCTATAGCGGTATACAATACAGCTCTTTCCAGGGTAAAG---CTGTTGAGCTGCTGTAATTTTCCTTG- i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 22075 200 - 34861 agagcacagtttcaggaaggtccattaaatgtgtcttttgaaagca-ttaggataaaaggctggcagaagagattcac-taagagcaatggtgccaagc-ttgcctcttggacattgttatctgactgat----aaaggtaggccatagCGGCACGCAATACAGATATTTCCAGGGTAACG---CTGTCGAGCTGCTATAACTTTCCTTG- i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 142938 202 + 192599291 tgagcacgatttcaggaaggtccattaagtgggtctttggagagcacttaggataaaaggctggcagcagggattcac-taagagcaatagtgccaaggtttgcctctttgacattgttatcggactgat----aaaGGTAGGCCACAGCAGTACACGATACGGATATTTCCAGGGTAAAG---CTATTGAGCTGCTATAATTTTCCTTT- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 165450 202 - 192460366 tgagctcgatttcaggaaggtccattaagtgggtctttggagagcacttaggataaaaggctggcagcagggattcac-taagagcaatagtgccaaggtttgcctctttgacattgttatcggactgat----aaaGGTAGGCCACAGCAGTACACGATACGGATATTTCCAGGGTAAAG---CTATTGAGCTGCTATAATTTTCCTTT- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112071 201 + 187378091 TGAGCACGATTTCAGGAAGGTCCATTAAGTGGGTCTTTTGAGAGCACTTAGGATAAAAGGCTGGCAGCAGGGATTCAC-TAAGagcaatagtgccaagg-ttgccTCTTTGACATTGTTATCGGACTGAT----AAAGGTAGGCCACGGCAGTACACAATACGGATATTTCCAGGGTAAAT---CTATTGAGCtgctataattttccttt- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 60186 201 - 101219884 tgagcacgatttcaggaaggtccattaagtgggtcttttgagagcacttaggataaaaggctggcagcagggattcac-taagagcaatagtgccaagg-tcgcctctttgacattgttattggactgAA----AAAGGTAGGCCACGGCAGTACACAATACGGATATTTCCAGGGTAAAG---CTGTTGAGCTGCTATAATTTTCCTTT- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 11105099 192 + 39895921 tga---cgatttcaggaaggtccattaaatgagtgttttgagaacacttaggataaaaggctggcagcagagattcacttaagaatga-gtcaCTAAGT-------------GATTCAGACCTGACTGATAGAAAAAAGTAGGCTTTAGACATAGACAATCTGGATATTTCCAGAGTAGAGTTACTATTGGA--GCTACCATTGCCCTTTG i canFam3.chr31 n 381 n 381 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=3029069.000000 s hg38.chrUn_GL000218v1 146560 1181 + 161147 CCTCTTCACTATCT-------------TCTCCTATAGTTGACTCCCAAGGAAAAGATAGTTGACTTTTAATCT----AGAAATATATGTTAATTGGCAAAAACAAAAAAATGAAACCATAAAATATCCTTTAGGCTTCTCTCTGC--------TCAGTTATTAGATCATATGAATGTGCCCTT---AGGAAACACAGAAGGCCC---------ACACTATTATAGAGACAAATTTCTTACATTTTCTGCTGTTTAATGCTCTTCAAAAGACTTACCAT-ACTTCACTAATTTGATTACCAACTACTTGAACACAGGGAC--------------CAATGTGCTTATTAAAAATTTTGCATATTATGAGGGCATTAAC-TTTTAAGTATTCAATTGT-------TAAGACAATGCATATTATTATAAACCATAGAAGGCACACTTAttacctccttaagatccagtctctatttctctggttcatagatctccaaggttatagagggattggacatttgtgt-cttcaattggccctcttcagccctaggataaatagtgattaatctaagccaatggttttcggctctgtctgacccaatgcctctacttcataagaaattctttaaagaccccttcgctattctaaactattagtg-agaacacaatgtatgcattcaagttgttgaaaatattaatgttatgctgaagctaa--caaaggagaaataatttactgtcaatatataatccaaaatgtatataattgtgccagaacatttacatc-tcaaatacaatagaacataatgaaattttcatatcttcgcccataccttgaaacattgtaaata-aaaagctaca-------aatat-----agTTTCATTGAATAA-CCAAATGCCAAAACTGCCATTTCTATTGTTGACATGATTGATCTGCATTGGCAAATGTAATAGATACTTTCTGTTTGGCCCTTGTCCCCTGTTATACTCCCCTATTTA-CTGGCTTTTGTCCAAGTGGAATGGTCCATATTGAATATCTCCATCGGTTCCCTTGCTCATTGCCTTCTATGCATGTTCATGAGATTAAAGGGAAGGAGGAAATGG-GATTGGGGGTTATTGCCTAAACTCCCTCTCTGCTAGGTCTCCTTGACCAATCT----TTTTCATAAGAAAATTAGTGTTTCCTTCTGTGATCAGGGCAGTTTACTCCCCAGAACTCTGC-CTGCCACTGCTAACCCAGAGTTATTGTGGCGTGTGATTT s panTro4.chr3 77228235 1179 + 202329955 CCTCTTTGCTATCT-------------TCTCCTATAGTCAACTCCTGAGGAAAGGATAGTTGACTTTTAATCT----AGAAATGTATGTTAATTAGCAAAAACAAACAAATGAAACCATAAACTGTCCTTTAGGCTTCTCTCTGC--------TCAGTTATTAGATCATATGAATGTGCCCTT---AGGAAACACAGAAGGCCC---------ACACTATTATAGAGACAAATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTA-CAT-ACTTCAGCAATTTGATTGCCAACTACTTGAACACAGGGAC--------------CAAAGTATTTATTAAAAATTTTGCATATTATTAGGGCATTAAC-TTTTAAGTATTCGATTGT-------TAAGACAATGCATATTATTATAAACCATAGAAGGCATACTTAttacctccttaagaaccagtctctatttctctggttcatagaactcccaggtcatagagggattggacatttgtgt-cttcatttggccctcttcagccctaggataaatagtgattaatctaagccaatgg-tttcagctctgtctgacccaatgcctctacttcataagaaattcttcaaagacccgttcactattctaaactattagaa-taaacacaatgtatgcattcaagttgttgaaaatattaatgttatgctgcagctaa--caaagaagaaataatttactgtcaatatataatccaaaatgtatataattgtgccagaatatttacata-tcaaatacaatagaacatgatgaaattttcatatcttcacccataccttgaaacattgtaaata-taaagctaca-------aatat-----agtttcattgaataa-ccaaataccaaaactgccatttctattgttgacatgattgatctgcattggtaaaTGTAATAGATACTTTCTGTTTGCTGCTTGTCCCCTGTTATACTCCCCTATTTA-CTGGCTTTTGTCCAAGTGGAATGGTCCATATTGAATATCTCAATAGGTTCCCTTGCTCATTACCTTCTATGCATGTTCATGAGATTAAAGGGAAGGAGGAAATGG-GATTGGGGGTTATTGCCTAAACTCCCTCTCTGCTAGGTCTCCTTGACCAATCT----TTTTCATAAGAAAATCAGTGTTTCCTTGTGTGATCAGGGCAGTTTACTCCCCGGAACTCTGC-CTGCTGCTACTAACCCAGAGTTATTGTGGGGTGTGATTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42398750 1181 + 202140232 CCTCTTCGCTATCT-------------TCTCCTATAGTCGACTCCCAAGGAAAAGATAGTTGACTTTTAATCT----AGAAATGTATGTTAACTGGCAAAAACAAACAAATGAAACCATAAACTATCCTTTAGgcttctttctgc--------ccagttattagatcatatgaatgtgtcctt---aggaaacacagaaggccc---------acactattatagacacaaatttcttacattctctgctgtttaatgctcttcaaaagACTTACCAT-ACTTCAGCAATTTGATTGCCAACTACTTGAACACAGGGAC--------------CAAAGTACTTATTAAAAATTTTGCACATTATGAGGGCATTAAC-TTTTAAGTATTCAGTTGT-------TAAGACAATGCATATTATTATAAACCATAGAAGGCACACTTAttacctccttaagaaccagtctctatttctctggttcatagaactcccaggtcctagagggattggacatttgtgt-cttcaattggccctcttcagccctaggataaatagtgattaatctaagccaacggttttcagctctgtctgacccagtgcctctacttcataagaaattcttcaaagaccccttcactattctaaactattagtg-agaacacaatgtatgcattcaagttgttgaaaatattaatgttatgctgcagctaa--caaaggagaaataatttactgtcaatatataatccaaaatgtatataattgtgccagaacatttacata-taaaatacaatagaacatgatgaaattttcatatcttcacccataccttgaaacattgtaaata-taaagctaca-------aatat-----agtttcattgaatag-ccaaatgccaaaactgccatttctattgttgacatgattGATCTGCACTGGCAAATGTAATAGATACTTCCTGCTTGCCCCTTGTCCCCTGTTACACTCCCCTATTTA-CTGGCTTTTGTCCAAGTGGAATGGTCCATATTGAATATGTCAATAGGTTCCCTTGCTCATTGCCTTCTATGCATGTTCATGAGATTAAAGGGAAGGAGGAAATGG-GATTGAGGGTTATTGCCTGAACTCCCTCTCTGCTAGGCCTCCTTGACCAATCT----TTTTCATAAGAAAATCAGTGTTTCCTTGTGTGATTAGGGCAGTTTACTCCCCAGAACTCTGC-CTGCTGCTACTAACCCAGAGTTATTGTGGGGTGTGATTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 22275 1172 - 34861 CCTCTTTGCTATCT-------------TCTCTTATAGTCGACTCCCAAGAAAAAGATAGTTGACTTTTAATCC----AGAAATGTATGTTAATTGGCAAAAACAAACAAATGAAGCCATAAACTATCCTTTAGGTTTCTCTCTGC--------TCAGTTATTAGATCATATGAATGTGCCCTT---AGGAAACACAGAAGGCCC---------ACACTATTATAGAGACAAATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTACCAT-ACTTCACCAATTTGATTGCCAACTGCTTGAACACAGGGAC----------------------TTATTAAAAATTTTGCATATTATGAGGGCATTAAC--TTTAAATATTTGATTGT-------TAAGACAATGCATATTATTATAAACCATAGAAGGCACACTTAttacctccttaagaaccagtctctatttctcttgttcatagaactcccaggtcatagagggattggacatttgtgt-cttcaattggccctcttcagccctaggataaatagtgattaatctaagccaaAggttttcagctctgtctgacccaatgcctctacttcataagaaattcttcaaagtccccttcactattctaaactattagtg-agaacaaaatgtatgtattcaagttgttgaaaatattaatgttatgctgcaggtaa--caaaggagaaataatttactgtcaatatataatccaaaatgtatataattgtgccagaacatttacata-tcaaatacaatagaacataatgaaattttcatatcttcacccataccttgaaacattgtaagta-aaaagctaca-------aatat-----agTTTCATTGAATAA-CCAAATGCCAAAACTGTCGTTTCTATTGTTGACATGATTGATCTGCACTGGTAAATGTGATAGATACTTTCTGCTTGATCCTTATCCCCTGTTATACTCCCCTATTTA-CCGGCTTTTGTCCAAGTGGAATGGTCCATATTGAATATCTCAATAGGTTCCCTTGCTCATTGCCTTCTGTGCATGTTCATGAGATTAAAGGGAAGGAGGAAATGG-GATTGGGGATTATTGCCTAAACTCCCTCTCTGCTGGGTCTCCTTGACTTCTCT----TTTTCATAAGAAAATCAGTGTTTCCTTGTGTGATCAGGGCAGTTTACTCCCCGGAAATctgc-ccgctgctactaacccagagttatcatggggtgtgatct i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 143140 1170 + 192599291 CCTCTTCACTAGCT-------------TCTCCTATAGCTGACCCCTGAGGAAAATATAGTTGACATTTAATCT----AGAAATGTATGTTAATTGGCAAAAACAAGCAAATGAAACCATAAACTATCCTTTAGGCTTCTCTATGC--------TTAGTTATTAGATCATACGAATGTGCCCTT---AGGAAACACGGAAGTCCC---------ACACTATTATAGA-ACAGATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTACGAT-ACTTCACTGGTTTGATTACCAACTACTTGAACACAGGGAC--------------CAAAGTACTTATTAAAAATTGTGCATATCATGAGGGCATTAAT-GTTTGAGTATTCGATTGT-------TAAGACAATGAA---TATTATGAACTATGGAAGGCACACTTAttacctccttgagaaccagtctctatttctctggttcatagaactcccagttcat-gagggattagacatctgtgt-gttcaattggccctcttcaaccctaggataaagaataattaatctaagccagtggttttcagctctgtctgacccaatgcctctacttcataagaaattcttcaaagaccccttcgctattctaaactattagtg-agaacacaatgtatacatttgcgttgttgaaaatattaatgttatactgcagctaa--caaaggagaaataatttaccgtcaatatagaatccaaagtgtgtataattgtgccagaaca-ttatata-tcaaatacagtggaacatgatgaaattttcatatctgtgcccataccttgaaacattgtaaata-aacggctaca-------aatac-----agTTTCATTGAAAAA-CTAAATGCCAAATCTGCCATTTCTATTGTTGACATGATTGATTTGCACTGGTCAATGCGATGCATACTTTCTGTTCGCCCCTTGTCCCCAGTTATACTACCCTATTTA-CTGGC-TTTGTCCGAGTGGGGTGGTCCATATTGAATATCTCAATAGCTTCCCTTGCTCATTGCCTTCTATGCGTGTTCATGAGATTAAAGGGAAGGAGGAAACGG-GACTGGGGATTATTGCCTAAACTCCCACTCTGCTAGGTCTCCTTGACCTCTCT----TTTTCATAAGAAAATCAGTGTTTCCTTATGTGATCAGGGCAGTTTGCTCCCCAGAACT-----CTGCTGCTACTAACCCAGAGTTATTGTTGGGTGTGATTT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 165652 1173 - 192460366 CCTCTTCACTAGCT-------------TCTCCTATAGCTGACCCCTGAGGAAAATATAGTTGACATTTAATCT----AGAAATGTATGTTAATTGGCAAAAACAAACAAATGAAACCATAAACTATCCTTTAGGCTTCTCTATGC--------TCAGTTATTAGATCATACGAATGTGCCCTT---AGGAAACACGGAAGTCCC---------ACACTATTATAGA-ACAGATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTACGAT-ACTTCACTGGTTTGATTACCAACTACTTGAACACAGGGAC--------------CAAAGTACTCATTAAAAATTGTGCATATCATGAGGGCATTAAT-GTTTGAGTATTCGATTGT-------TAAGACAATGAATATTATTATGAACTATGGAAGGCACACTTATTACCTCCTTGAGAACCAGTCTCTATTTCTCTGGTTCATAGAACTCCCAGTTCAT-GAGGGATTAGACATCTGTGT-GTTCAATTGGCCCTCTTCAACCCTAGGATAAAGAATAATTAATCTAAGCcagtggttttcagctctgtctgacccaatgcctctacttcataagaaattcttcaaagaccccttcgctattctaaactattagtg-agaacacaatgtatacatttgcgttgttgaaaatattaatgttatactgcagctaa--caaaggagaaataatttaccgtcaatatagaatccaaagtgtgtataattgtgccagaaca-ttatata-tcaaatacagtggaacatgatgaaattttcatatctgcgcccataccttgaaacattgtaaata-aacggctaca-------aatac-----agTTTCATTGAAAAA-CTAAATGCCAAATCTGCCATTTCTATTGTTGACATGATTGATTTGCACTGGTCAATGCGATGGATACTTTCTGTTCGCCCCTTGTCCCCAGTTATACTACCCTATTTA-CTGGC-TTTGTCCGAGTGGGGTGGTCCATATTGAATATCTCAATAGCTTCCCTTGCTCATTGCCTTCTATGCGTGTTCATGAGATTAAAGGGAAGGAGGAAACGG-GACTGGGGATTATTGCCTAAACTCCCACTCTGCTAGGTCTCCTTGACCTCTCT----TTTTCATAAGAAAATCAGTGTTTCCTTATGTGATCAGGGCAGTTTGCTCCCCAGAACT-----CTGCTGCTACTAACCCAGAGTTATTGTTGGGTGTGATTT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 112272 1174 + 187378091 tctcttcactAGCT-------------TCTCCTATAGCTGACCCCTGAGGAAAATATAGTTGACTTTTAATCT----AGAAATGTATGTTaattggcaaaaacaaacaaatgaaaccatAAACTATCCTTTAGGCTTCTCTCTGC--------TCAGTTATGAGATCATATGAATGTGCCCTT---AGGAAACACAGAAGTCCC---------ACACTATTATAGG-ACAGATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTACGAT-ACTTCACTGGTTTGATTACCAACTACTTGAACACAGGGAC--------------CAAAGTACTTATTAAAAATTGTGCATATCATGAGGGCATTAAC-GTTTGAGTATTCGATTGT-------TAAGACAATGAATATTATTATGAACTATGGAAGGCACACTTATTACCTCCTTAAGAACCAGTCTCTATTTCTCTGGTTCATAGAACTCCCAGTTCATAGAGGGATTAGACATCTGTGT-CTTCAGTTGGCCCTCTTCAACCCTAGGATAAAGAATAATTAATCTAAGCCAGTGGTTTTCAGCTCTGTCTGACCCAATGCCTCTACTTCATAAGAAATTCTTCAAAGACCCCTTCGCTATTCTAAACTATTAGTG-AGAACACAATGTATACATTCGAGTTgttgaaaatattaatgttatgCTGCAGctaa--caaaggagaaataatttaCCGTCAATATAGAATCCAAAGTGTGTATAACTGCGCCAGAACA-TTATATA-TCAAATACAGTGGAACATGATGAAATTTTCGTATCTGCGCCCATACCTTGAAACATTGTAAATA-AACGACTACA-------AATAC-----AGTTTCATTGAAAAA-CTAAATGCCAAATCTGCCATTTCTATTGTTGACATGATTGATTTGCACTGGTCAATGCGATGGATACTTTCTGTTCGCCCCTTGTCCCCAGTTATACTACCCTGTTTA-CTGGC-TTTGTCCAAGTGGGGTGGTCCATATTGAATATCTCAATAGCTTCCCTTGCTCATTGCCTTCTATGCATGTTCATGAGattaaagggaaggaggaaacgG-GACTGGGGATTATTGCCTAAACTCCCTCTCTGCTAGGTCTCCTTGACCTCTCT----TTTTCATAAGAAAATCAGTGTTTCCTTATGTGATCAGGGCAGTTTGCTCCCCAGAACT-----CTGCTGCTACTAACCCAGAGTTATTGTGGGGTGTGATTT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 60387 1178 - 101219884 CCTCTTCACTAGCT-------------TCCCCTATCGCTGACCTCTGAGGAAAATATAGTTGACTTTTAATCT----AGAAATGTATGTTAATTGGCAAAAATAAACAAATGAAACCATAAACTATCCTTTAGGCTTCTCTCTGC--------TCAGTTATTAGATCATACGAGTGTGCCCTT---AGGAAACACAGAAGTCCC---------ACACTATTATAGA-ACAAATTTCTTACATTCTCTGCTGTTTAATGCTCTTCAAAAGACTTATGAT-ACTTCACTGGTTTGATTACCAACTACTTGAACACAGGCAC--------------CAAAGTACTTATTAAAAATTGTGCATATCATGAGGGCATTAAC-GTTTAAGGATTCGATTGT-------TAAGACAATGAATATTATTATGAACtgtggaaggcacacttattgcctccttaagaaccagtctctatttctctggttcatagaactcccagttcatagagggattggacatctgtgt-cttcaattggccctcttcaaccctaggataaagaataattaatctaagccagtggttttcagctctgtctgacccaatgcctctacttcataagaaattcttcaaagaccccttcgctattctaaactattagtg-agaacacaatgtatacattcgagttgttgacaatattaatgttatgctgcagctaa--caaaggagaaataatttaccatcaatatagaatccaaagtgtgtataattgtgccagaaca-ttacata-tcaaatacgatggaacatgatgaaattttcatatctgtgcccataccttgaaacattgtaaata-aacggctaca-------aatac-----agTTTCATTGAAAAA-CTAAATGCCAAATCTGCCATTTCTATTGTTGACATGATTGATTTGCACTGGTCAATGTGATGGATACTTTCTGTTAGCCCCTTGTCCCTAGTTATACTACCCAACTTA-CTGGC-TTTGTCCAAGTGGTATGGTCCATATTGAATATCTCAATAGCTTCCCTTGCTCGTTGCTGTCTATGCATGTTCATGAGATTAAAGGGAAGGAGGAAACGG-GACTGGGGATTATTGCCTAAACTCGCTCTCTGCTAGGTCTCCTTGACCTCTCT----TTTTCGTAAGAAAATCAGTGTTTCCTTGTGTGATCAGGGCAGTTTGCTCCCCAGAACTctgc-ctgctgctactaacccagagttactgtggggtgtgattt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28790916 1233 - 39895921 ctgcttctccctctgcctgtgtctctgtctctcactgtgtatctctcatgaataaataaataa-----aatcttcaaaaaaaaATACATAAAT--ACTAAAATA---AAATAAAACCATACACTA-CCTTTAGACTGCCATATGCGTAGTTAATTAATTATTAGATCATACGA-TGTGCCTCTAACAAGGAGCACAGAAAGCCCATACTGCAGACACTATTAAAGAGATGACTTTCTTCCTTTCTCCTTTGTTTAATGTCCTTCAGAAGATCTGTTATCATCTCAGTAATTTGACTGCCAATTACTTGAAAACAGGGACTATATTTTTTGTCTCAAGGTACTTGTCAAGTGTTTTTCACATTATGGGGGCTGTAGCTTTTTAATTATTCAATTGTTAATTAATAAGACAATGCATAATGTTATAAATCAtagaagacacacttgttacttacatgaga--cattctcaatttttcaggctaatgaaactctcatttcatacaggaattggaca-ctgtatgcttcaataggccctcctcagccctagaatgaatagtgataaatctaagccaatggttttcagctctatatgacctaaagcctctaaatcataacacattcttgaatggtcacttcactatactgaaatgttagtgaaaaacataatgtatgtttttgagtccttaagaa-ataaa---tatgccacaagttatgtaaaggagaaatgatttgaaatcaatttatagt--aaatactgtataattgtgccaaagtatttacatatttaagtactatggaagataat-acatttttatgtgtgcacttgtatcttatatcattatatatgcaaaaactataatatggtaatgcgtgtgagttttattggacaattcaaatattgatgctgccattctcattgttgacatgattGATCTGGACCGGCAAATGCCGTAGATATCTTTTGTTCATCCC-CATCCCAAGTGGTACCGCACAGTTTacctcacttttgtccaagtagaatgacctatattgaatatatcagtagcctcccttgccctttggcttctgtttatgttTAAGAGATTAGAGGGAGGGAGTAGAGAGTGGTCAGGGGATATTTCCCAATCTCCCTCCCTACTTGGTCTATTTGGCCAACCTGTGCCTCTCATAAGAAATTCAGTGTTTCTTTCTCCTCTTAAGATGGTTTCTTCCCAATGATTTTTCTCTGCTGCTACTAACCC-----TAT------GTGCTACTC i canFam3.chr31 I 381 I 1 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=245380.000000 s hg38.chrUn_GL000218v1 147741 99 + 161147 CTGTGATTCCTTCACCCTTCTCCCCTGACATTTTCGTAAGTAGTCTCTTTGGAAATAAACCCATGTTAAATTATCTTAGTTTGTGTGTGTTCTATTTTT s panTro4.chr3 77229414 99 + 202329955 CTGTGATTCCTTCACCCTTCTCCCCTGATATTTTCGTAAGTAGTCTCTTTGGAAATAAACCCATGTTAAATTATCTTAGTTTGGGTGTGTTCTCTTTTT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42399931 99 + 202140232 CTGTGATTCCTTCAACCTTCTCCCCTGACATTTTCGTAAGTAGTCTCTTTGGAAATAAACCCATGTTAAATTATCTTAGTTGGGATGTGTTCTCTTTTT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 23447 99 - 34861 ctgtgattccttcacccttctcccctgacgttttcatacgtagtctctttggaaataaacccatgttaaattatcttagtttgagtgtgttctcttttt i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 144310 98 + 192599291 CTGTGGTTCCTTCACCC-TCTTTCCTGACATTTTTGTAAGTAGTCTCTTTGGAAATAAACCCATGTTAAATTATCTTAGTTTCAGTGTGTTGTCTTTGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 166825 98 - 192460366 CTGTGGTTCCTTCACCC-TCTTTCCTGACATTTTTGTAAGTAGTCTCTTTGGAAATAAACCCATGTTAAATTATCTTAGTTTCAGTGTGTTGTCTTTGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113446 99 + 187378091 CTGTGATTCCTACACCCTTCTTTCCTGACATTTTTGTAAGTAGTCTCCTTGGAAATAAACCCATGTTAAATTATCTTAGTTTGAGTGTGTTGTCTTTGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 61565 97 - 101219884 c--tgattccttcacccttctttcctgacatttttgtaagtagtctctttggaaataaacccatgttaaattatcttagtttgagtgtgttgtctttgt i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28792150 92 - 39895921 CTGTGGTTCCTCCAGTC-TCATCCCCCTTACCTTTGTAAGTAGTCT-TTTGTAAATAAACCT-TGTTAAATTATC----TTTGAGGATATTTCAttttt i canFam3.chr31 I 1 I 510 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1221429.000000 s hg38.chrUn_GL000218v1 147840 541 + 161147 CCTATTGAGACTCTGAAATGAGTAtctaaatgaaaaaatctaccatcttttctcatatacatagtagtttcattcttgcaaaattcatggcatattaaaaccatgcaaaagtacttggcacttaggcagttacatttgggattgtataattaaacaaagcaggttattcaccttcattacattagaaagtcattcaggacatacagcaatccttaattaggagcggctatcccatgttactggacatatggcatccctgTTTTCCAATCCTTAAAGTTTTTCCTTAAAGTATCAAAATGCCGTCACTTATTATTTCCTGCCATTGAATTTTGTCACATGAAGTTGTAAGGCTGGGAATGCCATAGCCATCTTGAAAACATAGGTAGAAAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAATTAACTAAGCATTGATACCATCTATTTGTTGTGTGATTTGGTCAAAGTTGCTCCTTGTTTTTTTCTTCAATTAGTTGACTATTCTGTTACTTGAAGCTAAAAACA-Tttttttc----tttt s panTro4.chr3 77229513 539 + 202329955 CCTATTGAGACTGTGAAATGAGTAtctaaatgaaaaaatctaccatcttttctcatgtaca---tagtttcattcctgcaaaattcatggcatattaaaaccatgcaaaagtacttggcacttaggcagttacatttcggtttgtataattaaacaaagcaggttattcaccttcattacgttagaaagtcattcaggacatatagcaatccttgattaggagcggctatcccatgttactggacatttggcatctctgTTTTCCAATTCTGAAAGTTCTTCCTTAAAGTTCCAAAATGCCCTCACTTATTCTTTCCTGCCATTGGATTTTGTCACATTCAGTTGTAAGGCTGGGAATGCCATAGCCATCTTGAAAACATAGCTAGAGAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAATTAACTAACCACTGATACCATCTATTTGTTGTGCGATTTGGTAAAATTTGCTCCTTGTTTTTTTCTACAATTAGTTGACTATTCTGTTACTTGAAGCTAAAAACATtttttttc----tttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42400030 538 + 202140232 CCTATTGAGACTGTGAAATGAGTAtctaaacgaaaaaatctaccatcttttctaatgtaca---tagtttcattcctgcaaaattcatggaatattaaaaccatgcaaaagtacttggcacttaggcagttacatttgggtttgtataattagacaaggcaggttattcgccttcattatgttagaaagtcattcatgacatgtagcaatccttgattaggagcggctatcccatgttactggacatttggcatccctgTTTTCCAATCCTTAAAGTTCTTCCTTAAAGTTCCAAAATGCCTTCACTTATTCTTTCCTGCCATTGAATTTTGTCACATGAAGTTGTAAGGCTGGGAATGCCATAGTCATCTTGAAAACATAGGTAGAAAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAATTAACTAACCATTGATACCATCTATTTGCTGTGTGATTTGGTAAAAGTTGCTCCTAGTTTTTTTCTACAATTAGTTGACTATTCTGTTACTTGAAGCTAAAACTt-tttttttc----tttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 23546 551 - 34861 cctattgagactctgaAATGAGTATCTAAACGAAAAATTCAaccatcttttctcatgtacatagtagtttcattcctgcagaattcatggcacattaaaaccatgcaaaagtacttggcgcttaggcagttacatttcggtttgtgtaattaaacgaagcaggttattcaccttcattacgttagaaagtcattcaggacatatagcaatccttggttaggagcggttatcccatgttactggacatttggcatccctgTTTTCCAATCCTTAAAGTTCTTCCTTAAAGTTCCAAAATGCCCTCACTTATTCTTTCCTGCCATTGGATTTTGTCCCATTAAGCTGTAAGGCTGGGAATGCCATAGCCATCTTGAAAAC--AGGTAGAAAGATAAGAGAATCACAAAGACGTGGATCAAAGACGTGGATCATGTTGAATTAACTAACCATTGATACCATCTACTTATTGTGCGATTTGGTAAAA-TTGCTCCTTGTTTTTTTCTACAATTAGTTGACTATTCTGTTACTCGAAGCTAAAAACT-TTTTtttc----tttt i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 144408 535 + 192599291 CCTATGGAGACTCTGAAATGAGTATCTATACG-AAAAATCtaccatcttttctcatgtacatagtagtttcattcctggaaaattcatggcatattaaaaccatgcaaaagtacttggcacttaggcagttacatttgggtttgtataattaaacaaaatgggttattcaccttcattacgttagaaagtcattcaggacatacagcaatccttgattagcagtggttatcccatgttactggacatttggcagccctgTTTTCCAGTCCTTAAAGTTCTTCCTCAAAGTTCCCAAACATCCTCACTTATCCTTTCCTGCCATGGGATTTTGTCACATTAAGTTGTAAGGCTGGGAATGCCATAGCCATCTTGAAAACATAGGTAGAAAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAGTTAACTAACCATTGATA-CATCTATTTGTTGTCCAATTTGGTAAAAGTTGCTCCTTATTTTTTTCTACGATTAGTTGACTATTCTGTTGCTTGAAGCTAAAAACT-TGtttttc-------- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 166923 535 - 192460366 CCTATTGAGACTCTGAAATGAGTATCTATATG-AAAAATCtaccatcttttctcatgtacatagtagtttcattcctggaaaattcatggcatattaaaaccacgcaaaagtacttggcacttacgcagttacatttgggtttgtataattaaacaaaatgggttattcaccttcattacgttagaaagtcattcaggacatacagcaatccttgattagcagtggttatcccatgttactggacatttggcagccctgTTTTCCAGTCCTTAAAGTTCTTCCTCAAAGTTCCCAAACATCCTCACTTATCCTTTCCTGCCATGGGATTTTGTCACATTAAGTTGTAAGGCTGGGAATGCCATAGCCATCTTGAAAACATAGGTAGAAAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAGTTAACTAACCATTGATA-CATCTATTTGTTGTCCAATTTGGTAAAAGTTGCTCCTTATTTTTTTCTACGATTAGTTGACTATTCTGTTGCTTGAAGCTAAAAACT-TGtttttc-------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 113545 536 + 187378091 CCTATTGAGACTCTGAAATGAGTATCTATACGAAAAAATCTACCATCTTTTCTCATGTACATAGTAGTTTCATTCCTGGAAAATTCATGGCATATTAAAACCATGCAAAAGTACTTGGCACTTAGGCAGTTACATTTGGGTTTGTATAATTAAACAAAATGGGTTATTCACCTTCATTACGTTAGAAAGTCATTCAGGACATACAGCAATCCTTGATTAGGAGTGGTTATCCCATGTTACTGGACATTTGGCAGCCCTGTTTTCCAATCCTTAAAGTTCTTCCTCAAAGTTCCCAAACATCCTCACTTATCCTTTCCTGCCATGGGATTTTGTCACATTAAGTTGTAAGGCTGGGAATGCCATAGCCATCTCGAAAACATAGGTAGAAAGATAAGAGACTCA-------------CAAAGAAGTGGATCATGTTGAGTTAACTAACCATTGATA-CATCTATTTGTTGTGCAATTTGACAAAAGTTGCTCCTTAtttttttCTACGATTAGTTGACTATTCTGTTGCTTGAagctaaaaact-tttttttc-------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 61662 540 - 101219884 cctattgagactctgaAATGAGTATCTATacgaaaaaatctaccatcttttctcatgtacatagtagtttcattcctggaaaattcatggcatattaaaaccatgaaaaagtacttggcacttaggcagttacatttgggtttgtataattaaacaaaaagggttattcaccttcattacgttagaaagtcattcaggacatacagcaatccttgattaggagtggttatcccatgttactggacatttggcagccctgTTTTCCAATCCTTAAAGTTCTTCCTCAAAGTTCCCAAACATCCTCACTTATCCTTTCCTGCCATGGGATTTTGTCACATTAAGTTGTAAGGCTGGGAATGCCAGAGCCATCTTGAAAACATAGGTAGAAAGATAAGAGAATCA-------------CAAAGAAGTGGATCATGTTGAGTTAACTAACCATTGATA-CATCTATTTGTTGTGCAATTTGGTAAAAGTTGCTCCTTGTTTTTTTCTACAATTAGTTGACTATTCTGTTGCTTGAAGCTAAAAACT-TAtttttctttt---- i chlSab2.chr22 C 0 I 463 e canFam3.chr31 28792242 510 - 39895921 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=256981.000000 s hg38.chrUn_GL000218v1 148381 173 + 161147 ctttctttc---------------------ttttttatttttgacagaaccttactcagttgcccaggctggagtgcagtggcatgatcttggctcactgcaacctctgcttgcctagttcaagcaattctcacacctcagcctccctagtagctgggattacaggcacatgccaccacactcagataattttt s panTro4.chr3 77230052 193 + 202329955 ctttctttctttctttctttctttctttttttttttttttttgacagagtcttactctgttgcccaggctggagtgcaatggcatgatcttggctcactgcaacctctgcttgtctggttcaagcaattctcccacctcagcctcccaagtag-tgggattacaggcacatgccaccacactcggataattttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42400568 190 + 202140232 ctttctttc---ttttcttttttcttttttttttctttttttgacagagtcttactctgttgcccaggctggagtgcaatggcatgattttggttcactgcaacctctgcttgcttggttcaagcaattctcccacctcagcctcccaagtagctggaattacaggcac-caccaccacactcggataattttt i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 24097 176 - 34861 ctttctttc------------------tttttttttttttttgacagaatcttactctgttgcccaggctggagtgcaatggcatgatcttggctcactgcaacctctgcttgcctggttcaagcaattctcccacctcagccttccaagtagctgggattacaggtgcgagccaccacacttggaaaattttt i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 144943 155 + 192599291 -------------------------------------tttttgacagagtcttactctgttg--caggctgaagtgaaatggcatgatctcggctcactgcaatctctgctcgcctggttcaagcaatcctcccacctcagcctcccaagtagctgggactgcaggcacacgccaccacactcaggtaattttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 167458 155 - 192460366 -------------------------------------tttttgacagagtcttactctgttg--caggctgaagtgaaatggcatgatctcggctcactgcaatctctgcttgcctggttcaagcaatcctcccacctcagcctcccaagtagctgggactacaggcacacgccaccacactcaggtaattttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114081 155 + 187378091 -------------------------------------tttttgacagagtcttactctgttg--cagGCTgaagtgaaatggcatgatctcggctcactgcaatctctgcttgcctgattcaagcaatcctcccacctcagcctcccaagtagctgggactacaggcacatgccaccacactcaggtaattttt i papAnu2.chr2 C 0 C 0 e canFam3.chr31 28792242 510 - 39895921 I e chlSab2.chr22 62202 463 - 101219884 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=20636.000000 s hg38.chrUn_GL000218v1 148554 8 + 161147 gtattttt s panTro4.chr3 77230245 8 + 202329955 gtattttt i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42400758 8 + 202140232 gtattttt i ponAbe2.chr3 C 0 I 6577 s nomLeu3.chrUn_GL397991_1 24273 8 - 34861 gtattttt i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 145098 8 + 192599291 gtattttt i rheMac3.chr2 C 0 C 0 s macFas5.chr2 167613 8 - 192460366 gtattttt i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114236 8 + 187378091 gtattttt i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 62665 8 - 101219884 gtattttt i chlSab2.chr22 I 463 C 0 e canFam3.chr31 28792242 510 - 39895921 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2204427.000000 s hg38.chrUn_GL000218v1 148562 1312 + 161147 agtagagatggggtttcaccctgtttgccaggctggtctcaaactcctgacctcaagtgatctgccc----acctcagcctaccaaagtgctgggattacaggtgtaagccactgaccctgccCAAAAACATTTTAACCAATAGCAAAGCACATTATTTCATTACATTTTTTCAAAAGTTGCCAGTAATTTCAATTAAAAatattatataacatgtttaatgcaatacaaatgcttttcaatgtacaatggggttaagtcttgataagctgattataaattgaaaatacagtaagttaaaaatgtatttaata--cttaacttactgaatatcacagcttagcctggcatacctttaatgtgctcagaacacttacatcagctgacaattgggcaaaatcattgaatacaaaacccgctttataataaagtattggatattttatgtaatttgttgaatattgtactgaaagtgaaaagcagaatggttatattctattcaaagctatcaattttgcttcatcataaag-taaaaaa-atcataaattgaaccattatcagttgttgaccatctgtgtatatgtatg----------tgtgtgtgtacctatataaacatgtatgtttatatatatatttgtgtgtgtatataacctcggtgtgtgtgtatgtgtgtttgagagagtgtgtctgtgtgtgtgtgtgtatgAAATTGTAGGGAAGTAAAATTTCTTATCTTATAGATATAGCA-TGTTAACATGTTGGTACCTATCCTCCTGAGATGTAAAATTTTACATGGATAGATGTGTACATTTACAGTTGTACACAAAGAGAAACATATTCTGTAGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGGTGATTACatatataatgctaggattaaggttcttctctataactttgaaacttccttgattatcaacccttggtatattcttagaataggattttattttagaattaagatccttgtttcaggactctagactgttaacacacagagccaataattattcagaatggttgggttagttcacattcccacagaggagacatcaaatgtccaggctgcacagcctcattaacactagattttctggacattttatatagtatttcatctgatataaaaagtagaattctaatttggttaaggttgttaatttatttttACATTTTTAGTCATTATGAAAATGTGTTACTATATGAAAAGCCAGGAAAGGG--TTTT-------TTTTTTTTAAGGTAGTACTTCAGAAATATTTATGATACTTAATTTTTAAAAATTAACTCT s panTro4.chr3 77230253 1287 + 202329955 agtagagatggggtttcaccatgtttgccaggctggtctcaaactcctgacctcaagtgatgcaccc----gccttggcctcccaaagtgctgggattacaggcgtgagccactgaccctggccAAAAACATTTTAACCAATAGCAAAGCACATTATTTCATTTCATTTTTTCAAAAGTTGCCAGTAATTTCAATTAAAAATATTATATAACATGCTTAATGCAATAcaaatgcttttcaatgtacaatggggttaagtcttgataagctgatcataaattgaaaatactgtaagttaaaaatgtatttaatatgcctaacatactgcacatcacagcttagcctggcatacctttaatatgctcagaacacttacatcagctgacagctgggcaaaatcattgaatacaaaacccattttataataaagtattggatattttatgtaatttgttgaatattgtactgaaagtgaaaagcagaatagttatattctattcaaagctatcacttttgcttcaacataatgttaaaaaa-atcataaattgaaccattataagttggtgaccatctgtgtatatgtata----------tgcatgtgtatctatataaatacgtatgtttatatata----tgtgtgcatatatatCCTCtgtgtgtgagtgtgtgtg----------------tgtgtgtgtgtgtgtatgAAATTGCAGGAAAGTAAAATT-----TCTTATAGATATAGCATTGTTAACATGTTGGTACCTATCCTCCTGAGATGTAAATTTTTACATGGATAGATGTGTACATTTACAGTTGTACACAAAGAGAAACATATTCTGTCGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGATGATTACatatataatgctaggatgaaggttcttctctataactttgaaacttccttgattatcaacccttggcatattcttggaataggattttattttagaattaagatccttgtttcaggactctagcctgttaacacacagagccaataattattcagaatggttgggttagttcacattcccacagatgggac-tcaaatgtccaggctgcacagcctcattaacactagattttctggacattttatatagtatttcatctgatataaaaagtagaattctaatttaattatggttgttaatttattttt--ctttTTAGTCATTAGGAAAATGTTTAACTATATGGAAAGCCAGGAAAGGG---TTT-------TTTTTTAAAAGGTAGCACTTCAGAAATATTTGTGATACTTAATTTTTAAAAATTAACTCC i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 24281 1301 - 34861 agtagagatggagtttcaccatgtttgccaggctggtctcaaactcttgacctcaggtgatgcaccc----gccttggcatcccaaagtgct-ggattacaggcgtgagccactgcccctggccAAAAGCATTTTAACCAATAGCAAAGCACATTACTT-----CATTTTTTCAAAAGTTGCCAGTAATTTCAATACAAAATATTATATAACATGCTTAATGCAATAcaaatgcttttcaacgtacaatggggtt--gtcttgataagatgatcataaattgaaaatactgtaagtt-aaaatgtatttaatatgactaacatactgaacatcacgacttagcctggcatacctttaatgtgctcagaacacttacatcagctgacagttgggcaaagtcattgaatacaaaacccactttataataaagtattggatattttatgtaatttattgaatattgtactgaaagtgaaaagcagaatagttatattctattcaaagctattacttttgcttcatcataaagttaaaaaacatcataaattgaaccattttaagttggtgaccatctgtgtatatgtatg----------tgtgtgtgtatctatataaatatgtatgtttctatatatatttgtgtgtatatatatcctctgtgtgtgcgtgtgtatg--tgagagag------agtgtgtgtgtatgtatgAAATTGTAGGAAAGTAAAATTTCGTATCTTATAGATACAGCA-TGTTAACATGTTGGTACCTATCCTCCTGAGATGTAAAACTTTACATGGATAGATGTGTGCATTTACAGTTGTACACAAAGAGAAACATACTCGCTAGGCTCTTTAGTTTTCTGTAGTTTCATTCAACACTATCTGGTTTATATGGATGattacaaatataatgctagggtgaaggttcttctctataactttgacacttccttgattatcaacccttggcatattcttagaataggattttattttagaattaagatccttgttttaggactctagcctgttaacacacagagccaataattattcagaatggttgggttaattcacattcccacagatgggacatcaaatgtccaggctgcacagcctcattaacactAGATTTTCTGGACATTTTATATAGTATTTCATCTGATATAAAAAGTAGAATTCTAATTTAATTATGGTTGTTAATTTATTTTTATATTTTTAGTCATTATGAAAATGTTTAACTATATGAAAAGCCAGGAAAGTGTTTTTT-------TTTTTTTTAAGGTAGTACTTCAGAAAGATTTGTGATACTTAATTTTTAAGAATTCACTCT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 145106 1298 + 192599291 agtagagatgaggtttcaccatgttttccaggctggtctcaaactcctgacctcaactgatgcagcc----tccttggcctcccaaagttctgggattacaggcatgagccactgcccctggccAAAAGCATTTTAACCAATAGCAAAACACATTATTTCATTTCATTTTTTCAAAAGTTGCCAGTAATTTCAATTAAAAATATTATATAACATGCTTAATGCGATAcaaatgcttttcaatgtacaatggggttaagtcttgataaactgatcataaatt-aaaatactgtaagttaaaaatgtatttaatatacctgacatactgaatatca-----tagcctggcatacctttaatgtgctcagaatacttacatcagctgacagttgggcaaaatcattgaatacaaaacccattttataataaagtattgtatattttatgtaatttgttgaatattatactgaaagtgaaaagcagaatagttatattctattgaaagctatcacttttgcttcatcataaag-taaaaaa-atcataaattgaaccattataagttggtgaccatctgTGtatatgtatgtgtgtgtatatgtgtgtgtatctatataaatatgtatgtttatatata--tttgtgtgcatatatTTCCTC--TGTGTG------------TGAGAG--------AGAGTGTGTGTGTGTATGAAATTGTAGGAAAGTAAAATTTCTTATCTTGTAGATATAGCATTGTTAACATGTTGGTGCCTATCCTTCTGAGATGTAAAATTTTACATGGATAGATGTGTACATTTACAGGTGTACACAAAGAGAAACATATTCTGTAGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGATGATTACatatataatgctaggatgaaggttcttccctataactttgaaacttccttgattatcaacccttggcatattcttagaataggattttattttagaattaggatccttgtttcaggactctagcccgttaacacacagagccaataattattcagaatggtcaggttagtttacattcccacaa--gggacatgaaatgtcccggctgcacagcctcattaatgctagattttCTGGATGATTTATACAGTATTTCATCTGGTATAAAAAGTAGAATTCTAATTTAGTAGTGGTCATTAATTTATTTTTACTTTCTTAGTCATTATGAAAATGTTTAACTACATGAAAAACCAGGAAAGCCTCTTTTTTG----TTTTTTTTTAGGTAGTACTTCAGAAATATTTGTGACACTTAATTTCTAAAAATTCACTCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 167621 1304 - 192460366 agtagagatgaggtttcaccatgttttccaggctggtctcaaactcctgacctcaactgatgcagcc----gccttggcctcccaaagttctgggattacaggcatgagccactgcccctggccAAAAGCATTTTAACCAATAGCAAAACACATTATTTCATTTCATTTTTTCAAAAGTTGCCAGTAATTTCAATTAAAAATATTATATAACATGCTTAATGCGATAcaaatgcttttcaatgtacaatggggttaagtcttgataaactgatcataaatt-aaaatactgtaagttaaaaatgtatttaatatacctgacatactgaatatca-----tagcctggcatacctttaatgtgctcagaatacttacatcagctgacagttgggcaaaatcattgaatacaaaacccattttataataaagtattgtatattttatgtaatttgttgaatattatactgaaaatgaaaagcagaatagttatattctattgaaagctatcacttttgcttcatcataaag-taaaaaa-atcataaattgaaccattataagttggtgaccatctgtgtatatgtatgtgtgtgtatatgtgtgtgtatctatataaatatgtatgtttatatata--tttgtgtgcatatatttcctctgtgtgtg------------tgagag--------agagtgtgtgtgtgtatgAAATTGTAGGAAAGTAAAATTTCTTATCTTGTAGATATAGCATTGTTAACATGTTGGTGCCTATCCTTCTGAGATGTAAAATTTTACATGGATAGATGTGTACATTTACAGGTGTACACAAAGAGAAACATATTCTGTAGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGATGATTACATATATAATGCTAGGATGAAGGTTCTTCCCTATAACTTTGAAACTTCCTTGATTATCAACCCTTGGCATATTCTTAGAATAGGATTTTATTTTAGAATTAGGATCCTTGTTTCAGGACTCTAGCCCGTTAACACACAGAGCCAATAATTATTCAGAATGGTCAGGTTAGTTTACATTCCCACAA--GGGACATGAAATGTCCCGGCTGCACAGCCTCATTAATGCTAGATTTTCTGGATGATTTATACAGTATTTCATCTGGTATAAAAAGTAGAATTCTAATTTAGTAGTGGTCATTAATTTATTTTTACTTTCTTAGTCATTATGAAAATGTTTAACTACATGAAAAACCAGGAAAGCCTCttttttgtttttttttttttAGGTAGTACTTCAGAAATATTTGTGACACTTAATTTCTAAAAATTCACTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 114244 1303 + 187378091 agtagagatgaggtttcaccatgttttccaggctggtctcaaactcctgacctcaactgatgcaccc----gccttggcctcccaaagttctgggattacaggcatgagccactgcccctggccaaaaACATTTTAACCAATAGcaaaacacattatttcatttcattttttcaaaagttgccagtaatttcaattaaaaatattatataacatgCTTAATGCGATACAAATGCTTTTCAATGTACAACGGGGTTAAGTCTTGATAAACTGAtcataaatt-aaaatactataagttaaaaatgtatttaatataccTGACATACTGAATATCACAGCTTAGCCTGGCATACCTTTAATGTGCTCAGAATACTTACATCAGCtgacagttgggcaaaatcattgAATACAAAacccattttataataaagtatggtatattttatgtaatttgttGAATattatactgaaagtgaaaagcaGAATAGTTATATTCTATTGAAAGCTATCACTTTTGCTTcatcataaag-taaaaaa-atcataaattgaaCCATTATAAGTTGGTGACcatctgtgtatatgtatgtgtgtgtatatgtgtgtgtatctatataaatatgtatgtttatatata--tttgtgtgcatatatatcctctgtgtgtg------------tgagag--------agagtgtgtgtgtgtatgaaattgTAGGAAAGTAAAATTTCTTATCTTGTAGATATAGCATTGTTAACATGTTGGTGCCTATCCTTCTGAGATGTAAAATTGTACATGGATAGATGTGTACATTTACAGGTGTACACAAAGAGAAACATATTCTGTCGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGATGATTACATATCTAATGCTAGGATGAAGGTTCTTCCCTATAACTTTGAAACTTCCTTGGTTATCAACACTTGGCATATTCTTAgaataggattttattttagaattaggaTCCTTGTTTCAGGACTCTAGCCCGTTAACACACAGAGCCGATAATTATTCGGAATGGTCAggttagtttacattcccacaa--ggGATATGAAATGTTCCGGCTGCACAGCCTCATTAATGCTAGATTTTCTGGATGATTTATACAGTATTTCATCTGGTATAAAAAGTAGAATTCTAATTTAGTAGTggtcattaatttatttttactttcttagtcattatgaaaatgtttaaCTACATGAAAAACCAGgaaagcgttttttt------tttttttttaggtagtacttcagaaatatttgtgacagttaatttctaaaaattcacTCT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 62673 1309 - 101219884 agtagagatgaggtttcaccatgttttccaggctggtctcaaactcctgacctcaactgatgcacccacctgccttggcctcccaaagttctgggattacaggcatgagccactgcccctggccAAAAACATTTTAACCAATAGCAAAACACATTATTTCATTTCATTTTTTCAAAAGTTACCAGTAATTTCAATTAAAAATATTATATAACATGCTTAATGTGATAcaaatgcttttcaatgtacaatggggttaagtcttgataaactgatcataaattgaaaatactgtaagttaaaaatgtatttaatatacctgacatactgaatatcacggcttagcctggcatacctttaatgtgctcagaatacttacatcagctgacagttgggcaaaatcattgaatacaaaacccattttataataaagtagtgtatattttatgtaatttgttgaatattatactgaaagtgaaaagcagaatagttatattctattgaaagctatcacttttgcttcatcataaag-taaaaaa-atcataaattgaaccattataagttggtgaccatctgtgtatatgtatgggtgtgtatatgtgtgtgtatctatataaatatgtatgtttatatata--tttgtgtgcatatatatcctctgtgtgtg------------tgagac--------agagtgtgtgtgtgtatgAAATTGTAGGAAAGTACAATTTCTTATCTTGTAGATATGGCATTGTTAACATGTTGGTGCCTGTCCTTCTGAGATGTAAAATTTTGCATGGATAGATGTGTACATTTACAGGTGTACACAAAGAGAAACATATTCTGTAGGCTCTTTGTTTTTCTGCAGTTTCATTCAACACTATCTGGTTTATATGGATGATTACATATATAATGCTAGGATGAAGGTTCTTCCCTACAACTTTGAAACTTCCTTGATTATCAACCCTTGGCATATTCTTAGAATAGGATTTTATTTTAGAATTAGGATCCTTGTTTCAGGACTCCAGCCCGTTCACACACAGAGCCAATAATTATTCAGAATGGTCAGGTTAGTTTACATGCCCACAA--GGGACATGAAATATCCCGGCTGCACAGCCTCATTAATGCTAGATTTTCTGGATGATTTATACAGTATTTCATCTGGTATAAAAAGTAGAATTCTAATTTAGTAGTGGTCATTAATTTATTTTTACTTTCTTAGTCATTATGAAAATGTTTAACTACATGAAAAACCAGGAAAGCGTTTTTTGT-----TTTTTTTTTAGGTAGTACTTCAGAAATATTTGTGACACTTAATTTCTAAAAATTCACTCT i chlSab2.chr22 C 0 I 144 e canFam3.chr31 28792242 510 - 39895921 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=256669.000000 s hg38.chrUn_GL000218v1 149874 156 + 161147 AAAAGAATCTTGAAATGTCTGTTTAATAAAATAGGACATAAATACTGGTCACATTAGTGAAAAATATTTGTTTAAAATTAAAATATCTGCAGCAATCCTGTAGATATTAATAA-GTTTTTAAAGAATGACATCTTCAAAATATAACTGTTCTAAACT s panTro4.chr3 77231540 157 + 202329955 AAAAGAATCTTGAAATGTCTCTTTAATGAAATAGGACATAAATACTGGTCACATTAGTGAAAAACATGTGTTTAAAATTAAAATACCTGTAGCAATCCTGtaaatattaataatttttttaaaGAATGACATCTTCAAAATATAAATGTTCTAAACT i panTro4.chr3 C 0 I 12 s nomLeu3.chrUn_GL397991_1 25582 157 - 34861 AAAAGAATCTTGAAATGTCTCTTTAATGAAATAGGACATAAATACTCGTCACATTAGTGAAAAATATGTGTTTAAAATTAAAATCTCTGCAGAAATCCTGTAAATATTAATAATTTTTTTAAAAATTGACATCTTCAAAATATAAATGTTCTAAACT i nomLeu3.chrUn_GL397991_1 C 0 I 12 s rheMac3.chr2 146404 156 + 192599291 AGAAGGCTCTTGAAATGTCTCTTTAATGAAATAGGACATAAATGCTGATCACGTTAGTGAAAAATACGTGTTTAAAATTAAAATCTCTGCAGCAATCCtataaatattaatat-atttttaaataatGACATCTTCAAAATATAAATGTTATAAACT i rheMac3.chr2 C 0 I 34 s macFas5.chr2 168925 156 - 192460366 AGAAGGCTCTTGAAATGTCTCTTTAATGAAATAGGACATAAATGCTGATCACGTTAGTGAAAAATACGTGTTTAAAATTAAAATCTCTGCAGCAATCCTATAAATATTAATAT-ATTTTTAAATAATGACATCTTCAAAATATAAATGTTATAAACT i macFas5.chr2 C 0 I 12 s papAnu2.chr2 115547 156 + 187378091 AGAAGGCTCTTGAAATGTCTCTTTAATAAAATAGGACATAAATGCTCATCACGTTAGTGAAAAATAcgtgtttaaaattaaaatctctgcagcaatcctataaatattaatat-ttttttaaataatgacatcttcaaaatataaatgttataaact i papAnu2.chr2 C 0 I 12 s chlSab2.chr22 64126 154 - 101219884 AGGAGGCTCTTGAAATGTCTCTTTAATGAAATAGGACACAAATGCTGATCACGTTAGTGAAAAATACGTGTTTAAAATTAAAATCTCTGCAGCAATCCTATAAATATTA--AT-TTTTTTAAATAATGACATCTTCAAAATATAAATGTTATAAACT i chlSab2.chr22 I 144 I 12 e canFam3.chr31 28792242 510 - 39895921 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=17793.000000 s hg38.chrUn_GL000218v1 150030 25 + 161147 AATATGTCTCCATTAATACATATAG s panTro4.chr3 77231709 25 + 202329955 AATATGTCTCTATTAGTACATATAG i panTro4.chr3 I 12 C 0 s nomLeu3.chrUn_GL397991_1 25751 25 - 34861 aatatgtctctattaatacatatag i nomLeu3.chrUn_GL397991_1 I 12 C 0 s macFas5.chr2 169093 21 - 192460366 AATATGCCTCTATTAAAATAG---- i macFas5.chr2 I 12 I 1 s papAnu2.chr2 115715 21 + 187378091 AATATGCCTCTATTAAAATAG---- i papAnu2.chr2 I 12 I 1 s chlSab2.chr22 64292 21 - 101219884 AATATGCCTCTATTGAAATAG---- i chlSab2.chr22 I 12 I 1 e canFam3.chr31 28792242 510 - 39895921 I e rheMac3.chr2 146560 34 + 192599291 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=58308.000000 s hg38.chrUn_GL000218v1 150055 32 + 161147 ATACATATATCTAAATAAATTTGAAGACTTCA s panTro4.chr3 77231734 32 + 202329955 ATATATATATCTAAATAAATTTGAAGATTTCA i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 25776 32 - 34861 atacatatatctaaataaatTTGAAGACTTCA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 146594 32 + 192599291 ATACATAGATCTAAATAAATTTGAAGACTTCA i rheMac3.chr2 I 34 M 178 s macFas5.chr2 169115 32 - 192460366 ATACATAGATCTAAATAAATTTGAAGACTTCA i macFas5.chr2 I 1 C 0 s papAnu2.chr2 115737 32 + 187378091 ATACATAGATCTAAATAAATTTGAAGACTTCA i papAnu2.chr2 I 1 C 0 s chlSab2.chr22 64314 32 - 101219884 ATACATAGATCTAAATAAATTTGAAGACTTCA i chlSab2.chr22 I 1 C 0 e canFam3.chr31 28792242 510 - 39895921 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=22735.000000 s hg38.chrUn_GL000218v1 150087 19 + 161147 AATTCAAGGTACAATATAA- s panTro4.chr3 77231766 19 + 202329955 AATTCCAGGTACAATATAA- i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 25808 20 - 34861 AATTCCAAGTACAATATAAT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 169147 19 - 192460366 AATTCCAGGTACAATATAA- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115769 19 + 187378091 AATTCCAGgtacaatataa- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64346 19 - 101219884 AATTCCAGGTACAATATAA- i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28792242 510 - 39895921 I e rheMac3.chr2 146626 178 + 192599291 M e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=82642.000000 s hg38.chrUn_GL000218v1 150106 72 + 161147 TTTTTTTCTATCCTTTGATTTGTCATTCAGGATTTTGTAATTTGAACAGAAATATTTTGCCCTAAC-CACA--GG- s panTro4.chr3 77231785 72 + 202329955 TTTTTTTCTATCCTGTGATTTGTCATTCAGGATTTTGTAATTTGAACAGTAATATTTTGCCCTAAC-CACA--TG- i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 25828 70 - 34861 TTTTTTTCTATCCTGTGATTTGTCATTCAGGATTTTGTAATTTGAACAGAAATATTTTGCCTTAAC-CACA----- i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 169166 69 - 192460366 -TTTTTTCTATACTGTGATTTGTCATTCAGGATTTTGTAATTTGAACAGAAATACTTTGCCCTAAC-CACG----- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115788 69 + 187378091 -ttttttctatacTGTGATTCGTCATTCAGGGTTTTGTAATTTGAACAGAAATACTTTGCCCTAAC-CACG----- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64365 71 - 101219884 -TTTTTTCTATACTGTGATTTGTCATTCAGGATTTTGTAATTTGAACAGAAATACTTTGCCCTAAC-CACATG--- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28792752 66 - 39895921 tctctctctccctctctgtgtgtctgtcatgaattaa------aaaaaaaaaAAATTTGCCTTAACTCATA----A i canFam3.chr31 I 510 C 0 e rheMac3.chr2 146626 178 + 192599291 M e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=423675.000000 s hg38.chrUn_GL000218v1 150178 208 + 161147 TCTGTCTTTTCTCTTA-CTAAAAATATTATTTTATGTAAAATTGTTTTAAAGGTCAGTTTGCAAGTTTGAAAAGCATCTTGTACAATGTTACATAAT-ATATTGCATATTTGGTTACATTGTTTTAACTGTGTAAATATGGTTTAAATCTGTGATGCTCTTTAGTGATGATCATGATGCAAATCAAATTTGTCTGT-ATAAAAGGCTCCTG s panTro4.chr3 77231857 209 + 202329955 CCTGTCTTTTCTCTTACCTAAAAATGTTATTTTATGAAAAATTGTTTTAAAGGTCAGTTTGCATGTTTGAAAAGCATCTTGTACAATGTTACATAAT-ATATTGCATATTTGGTTATATTGTTTTAACTGTGTAAATATGGTTTAAATCTATGATGCTCTTTAATGCTGATCATGGTGCAAAGCAAACTTATCTGT-ATAAAAGGCTCCTG i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 25898 206 - 34861 --TGTCTTTTCTCTTACCTAAAAATGTTATTTTATGAAAAATTGTTTTAAAGGTCAGTTTGCATG-TTGGAAAGCATCTTGTACAATGTTACATAAC-ATATTTCATATTTGGCTGTGTTGTTTTAACTGTGTAAATATGGTTTACATCTATGATGCTCTTTAGTGCCGATCATGAGGCAAAGCAAATTTATCTGT-ATGAAAGGCTCCTG i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 146804 209 + 192599291 TCTGTCTTTTCTCTTACCTAAAAATGATATTTTATGAAAAATTGTTTTAAAGGTCAGTTTGTATGTTTGAAAACCATCTTGTACAATGTTACACAAT-ATGTTGCATATTTGGTTATATTGTTTTAACTATGTAAATATGGTTTGAATCTATGATGTTCTTTAGTGCCGATCATGATGCAAAGCAAATTTATCTGT-ATAAAAGGCTCCTG i rheMac3.chr2 M 178 C 0 s macFas5.chr2 169235 209 - 192460366 TCTGTCTTTTCTCTTACCTAAAAATGATATTTTATGAAAAATTGTTTTAAAGGTCAGTTTGTATGTTTGAAAACCATCTTGTACAATGTTACACAAT-ATGTTGCATATTTGGTTATATTGTTTTAACTATGTAAATATGGTTTGAATCTATGATGTTCTTTAGTGCCGATCATGATGCAAAGCAAATTTATCTGT-ATAAAAGGCTCCTG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 115857 209 + 187378091 TCTGTCTTTTCTCTTAcctaaaaatgatattttatgaaaaattgttttaaaggtcAGTTTGTATGTTTGAAAACCATCTTGTACAATGTTACACAAT-ATGTTGCATATTTGGTTATATTGTTTTAACTATGTAAATATGGTTTAAATCTATGATGTTCCTTAGTGCTGATCATGATGCAAAGCAAGTTTATCTGT-ATAAAAGGCTCCTG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64436 209 - 101219884 TCTGCCTTTTCTCTTACCTAAAAATGATATTTTATGAAAAATTGTTTTAAAGGTCAGTTTGTATGTTTGAAAACCATCTTGTACAATGTTACACAAT-ATGTTGCATATTTGGTTATATTGTTTTAACTATGTAAATATGGTTTAAATCTATGATGTTCTTTAGTGCCGATCATGATGCAAAGCAAATTTATCTGT-ATAAAAGGCTCCTG i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28792818 202 - 39895921 --TATCATTTCTTTTATGTGCAAAT-TTATCCCATG-ATAATTGCTTTAAAGATCAATTTGAATGTCAGAAAAACATTTTGTACAGCATCACACTATAACATCCAATATTAGATTATA-----TTAACTATGTAAATACTGTTTAAATCTATGATGTTCTTTAGTATTGAGGATAAAACAAAACACATTTATCTGTAATAATGGACTCTTG i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=1911.000000 s hg38.chrUn_GL000218v1 150386 1 + 161147 T s panTro4.chr3 77232066 1 + 202329955 T i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 26104 1 - 34861 T i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 147013 1 + 192599291 T i rheMac3.chr2 C 0 C 0 s macFas5.chr2 169444 1 - 192460366 T i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116066 1 + 187378091 T i papAnu2.chr2 C 0 C 0 s canFam3.chr31 28793020 1 - 39895921 T i canFam3.chr31 C 0 C 0 e chlSab2.chr22 64645 0 - 101219884 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=837.000000 s hg38.chrUn_GL000218v1 150387 4 + 161147 TAAt s panTro4.chr3 77232067 4 + 202329955 TAAt i panTro4.chr3 C 0 C 0 s rheMac3.chr2 147014 4 + 192599291 TAAG i rheMac3.chr2 C 0 C 0 s canFam3.chr31 28793021 4 - 39895921 TGGT i canFam3.chr31 C 0 C 0 e nomLeu3.chrUn_GL397991_1 26105 0 - 34861 C e chlSab2.chr22 64645 0 - 101219884 C e papAnu2.chr2 116067 0 + 187378091 C e macFas5.chr2 169445 0 - 192460366 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=1168.000000 s hg38.chrUn_GL000218v1 150391 20 + 161147 ttttt----------ttattatactttaag s panTro4.chr3 77232071 24 + 202329955 tttttttt------attattatgctttaag i panTro4.chr3 C 0 C 0 s canFam3.chr31 28793025 30 - 39895921 TTTTAATTTGGGGCAAAATTATATCTTAAA i canFam3.chr31 C 0 C 0 e nomLeu3.chrUn_GL397991_1 26105 0 - 34861 C e chlSab2.chr22 64645 0 - 101219884 C e papAnu2.chr2 116067 0 + 187378091 C e macFas5.chr2 169445 0 - 192460366 C e rheMac3.chr2 147018 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=398116.000000 s hg38.chrUn_GL000218v1 150411 4903 + 161147 ttttagggtacatgtgcacaacgtgcaggtttgctacatatgtacacatgtgccatgttggtgtgctgcacccatta-actcctcatttaacattaggtatatctcctaatgctatccctaccccctccacccaccccacaacagtccccggtgtgtgatgttccccttcctgtatccatgtttcctcattgttcaattcccacctatgagtgagaacatgtggtgtttggtttttt-cccttgcaatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaactcatcattttttatggctgcatggtattccgtggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacgtgtgcatgtgtctttagagcagcatgatttataatcttttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcaccacactgacttccacaatggttgaactagtttacagtcccatcaacagtataaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgacttttttatgatcgccattctaactggtgtgagatggtatctcattgtggttttgatttgcatttctctgatggccagtgatgatgagcattttttcatgtgtcttttggctgcataaatgtcttcttttgagaattgtctgttcatttcctttgcccacattttgatggggttgtttgttttcttcttgtgaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcaaaacttttctcccatactgtaggatgtctattcactctgatggtagtttcttttgctgtgcagaagctccttagtttaattagatcccatttgtcaattttgtcttttgttg---------------ccattgcttttggtgttttagacatggagtccttacccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtctgacatgtaagtctttaatccatcttgaattaatttttgtataaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccctatttcttgtttttgtcaggtttgtcaaagatcagatagttgtagatatgcggcattatttctgagggctctgtcctgttccattggtctatatctctgttttggtactagtaccatgctgttttggttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcctccagctttgttcttttgccttaggattgacttggcaatgcaggctcttttttggttccatatgaactttaaagtaatttttttccaattctgtgaagaaagtctttggtagtttgatggagatggcattgaatctttaaattaccttgggcagtatggccattttcacgacattgattcttcctacccatgagcatggaatgttcttccatttgtttgtatccttttttatttcattgagcagtgatttgcagttctccttgaagaggtccttcacatcccttgtaagtggtattcctaggtattttattctctttgaagcaattgttaatgggagttaactcatgatttggctctctgtttgtctgttattggggtataagaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaacgagattttgggctgagacgatggagttttccacattcacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaatgccctttatttccttctccttcctgattgccctggccagaacttccaatactatgttgaataggagtggtgagagagggcatccctgttttgtgccagttttcaaagggaatgcttccagtttttgtccattcaatatgatattggctgtgggtttgtcatagatagctcttattattttgagatacgtcctatcaatccctaatttattgagaggttttagcatgaagatttgctgaattttgtcaaaggacttttctgcatctattgagataatcatgtggtttttgtctttggtcctgtttatatgctggattacgtttactgattttcatatgatgaaccagcctttcatcccagggatgaaatccacttgatcatggtggataagcttttttatgtgttgtaggattctgtttgccagtattttattgaggatttttgcatcactgttcatcaagaatattggtctaaaattctctttttttgttttgtctctgccaggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttctattgattggaatagtttcagaaggaatggtaccagctcctccttgtgccactggtagaatttggctgtgaatccatctggtcctggac-tttttttggttggtaagctattaattattgcctcaatttcagagcctgttattggtctattcagggattcaacttcttcctggtttagtcttgggagagtatacgtgtcgaggaatttatccatttcttctagattttctagtttatttgtgtagagatgtttatagtattctctgatggtagtgtgtatttctgtgggatcggtggtgatatcccctttgtcaatttttattgcatctctttgattcttctctcttttcttctttattagtcttgctagtggtctatcaattttgttgatcttttc-aaaaaaccagctcctggattcattgattttttgaaggg-ttttttgtgtctctatttccttcagttctgctctgatctaaattacttcttgccttctgttatcttttgaatgtgtttgctcttgcttctctagttcttttaattgtgatgttaggatgtcaattttagttctttcatgctttctcttgtgggcatttagtgctgtaaatttccctccacacactgctttgaatgtgtcccagagatactggtatgttgtgtctttgttcttgttggtttcaaataacatctttatttctgccttcatttcgttatgtacccagtagtcattcaggagcaggttgttcagtttccatgtagttgagtggtcttgagtgagtttttaaatcctgagttgtagtttgattgcactgtgttctgagagacagtttgttatactttctgttcttttacatttgctaaggagtgctttacttccaactatgtgctcaattttggaataggtgtggtgtggtgctgaaaagaatacatattctgttgatttggggtacagagttctgtagatgtctattaggtctgcttagtgcagagctgagttcaattcctgtatatccttgttaactttctgtctcgttgatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtcactttgtaggtcactaaggacttgctttatgaatctgggtgcttctgtattgtgtgcatatatatttaggatagttagttcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatctttgttggtttaaagtctgttttatccgagactaggattgcaacccctgcc--tttttttgttttccatttgcttggtagatcttcctccatccctttattttgagcctatttgtgtctctgcacgtgagatgggtttcctggatacagcacactgatgggtcctgactctttatccaatttgccagtctgcaccttttaattggagcatttaacccatttacatttaaggttagtattgttatgtgtgaatttgatcctgtcattatgatgttagctggttattttcctcgttagtttatgcagtttcttcctagccttgatggtctttacaatttggcgtggttttacagtggcttgtaccagttgctcctttccatgtttagtgcttccttcaggagatcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtctgtggagcatattatttctccctcacttatgaaggttagtttggctggatatgaaattcagggttgaaaattctttcctttaagaatgttgaatattggcccctactctcttctggcttgtagagtttctgcagagagatcagcagttagtctgatgggcttccttttgtgggtaacccgacctttctctctggctgcctttaaaattttttctttcatttcaactttggtgaatctgacaattatgtgtcttggaattgttcttctcaaggagtatctttgtagcattctctgtatttcctgaatgtgaatgttggcctgccttgctagattggggaagttctcctggataatatactgcagagtgttttccaacttggttccattctccctgtcactttcaggtaaaccaaatagacgtagatttggtctattgacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttcatgcttcatttcattcatttcatcttccatcactgataccctttcttcccgttgatcacatcggttactgaggcttatgcatttgtcatgtagttttcatgccatggttttcagctccgtcaggtcctttaaggacttctccacattggttattctagttatctgttcgtctaattttttttcc-aagtttttaact s panTro4.chr3 77232095 4843 + 202329955 ttttagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatattggtgtgctgcacccattatactcgtcatttggcattagttatatctcctagtggtatccctcccctctccctccaccccacaacagtccccagtgtgtgatgttccccttcctgtatccatgtgttctcattgttcaattcccacctgtgagtgagaacatgcggtgtttggttttttgtccttgcgatagtttgctgagaatgacggtttccagcttcatcc------------------------------------------------------------atatgtgccatattttctt----cagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgtggcaataaacatatgtgtgcaggtgtctttatagcaacatgatttataatcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgccacaccaacttccacaatggttgaactagtttacagtcccaccaacagtgtaaaagtgttcctatttctccacatcctctccagcacctgttgtttcctgactttttaataatcacaattctaactggtgtgagatggtatctcattgtgg-tttgatttgcatttctctgatggccagtgatgatgagca-tttttcatgtgttttttggctgcataaatatcttcttttgagaagtgtctgttcatatccttcgcccacttgttgatggggttgtttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccctttgtcagatgagtaggttgcaaaaattttctcccattttgtaggttgcctgttcactctgatggtagtttcttttgctttgcagaagctctttagtttaattagatcccatttgtcagttttggcttttgttgccattgcttttgtttccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaataatattgcctaggttttcttctagggattttatagttttaggtctaacatgtaagtctttattccatcttgaattaatttttgtataaggtgcaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccccatttcttgtttttgtcagatttgtcaaagatcagatggatgtagataagcatcattatttctgagggctctgttctgttccatttgtctatgtctctgttttggtaccagtaccatgctcttttgggtcctgtagccttgtagcgtagtttgaagtcaggtagcgtgatgcctccagctttgttcttttggcttaggattgacgtggtgatgtgggctctttttttgttccatatgaactttaaagtag-ttttttccaattctgtgaagaaagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccattttcacgatattggttcttcctacccatgagcatagaatgttcttccatttgtttgtatcctcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacgtcccttgtaagttggattcctaggtattttattctctttgaagcaattgtgaatgggagttcactcatgatttggctctctgtttgtccgttattggtgtataagaatgcttgtgatttttgcacattgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattttgggctgagatgatggggttttctagatatacaatcatgtcatctgcaaacagggacaatttgacttcctcttttcctaattgaatgccctttatttccttctcctgcctgatttccctggccagaacttccaacactatgtttaataggagtggtgagagagggcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcatagatagctcttattattttgagatacgtcccatcaatacctaatttattgagagtttttagcatgaagggttgttgaattttgtcaaaggccttttctgcatctattgagataatcatgtggtttttgtctttggttctgtttatatgctggattacatttattgattttcatatgtcgaaccagccttgcatcccagggataaagcccacttgatcataatggataagctttttgatgttttgctggattcggtttgccagtattttattgaggatttttgcagcaatgttcatcagggatattggtctaaaattctcttttttggttgtgtctctgcccggctttggtatcaggatgatgctggcctcataaaatgagttagggaggattccctctttttttactgattggaatagtttcagaaggaatggtaccacttcctccttgtacctctggtagaattcagctgtgagtccatctggtcctggacttttttttggttgttaagctattaattattgcctcaatttcagagctcgttattggtctattcagagattcaacttcctccttgtttagtcttgggagagtgtatgtttcgaggaatttatccattttttctagattttctagtttgtttgtgtagaggtgtttatagtattctctgatggtagtttgtatttctgtgggatctgtggtgatatcccctttatcattttttattgcatctatttgattcttctctcttttcttctttattagtcttgctagtggtctgtcaattttgttgatcttttcaaaaaaaccagctcctggattcattgattttttgaagggtttttttgtgtctctatttccttcagttctgctctgatcttagttatttcttgccttctgctagcttttgaatgtgtttgctcttgcttttctagttcttttaattgtgatgttagggtgtcaattttagatctttcttgctttctcttgtgagcatttagtgctataaatttccctctacacactgctttgaatgtgtcccagagattctggtatgttgtgtctttgttctcgttggtttcaaa---------------ggccttcgtttcattatgtacccagtagtcattcaggagcaggttattcagtttccatgtagttgcgcggttttgagtgagtttcttaatcctgagttctagtttgattgcactgtggtctgagagacagtttgttataatttctgttcttttacttttgctgaggagtgctttacttccaactatgtggtcaattttggaatagctgtggtgtggtgctgaaaagaatgcatattctgttgatttggggtatagagttctgtagttgtctattaggtctgcttggtgcagaggtgagttcaattcctggatatccttgttaactttctgtcttgttgatctgtctaatgttgacagtggggtgttaaagtctcccattattattgtgtgggagtctaagtctctttgtaggtcactcaggacttgctttatgaatctgggtgctcctgtattgggtgcatatatatttaggatagttagttcttgttgaattgatccctttaccattatgtaatggccttctttgtctcttttgatctttgttggcttaaagtctgttttatctgagactaggattgcaacccctgcctttttttttgttttccatttgcttggtagatcttcctccatccctttattttgagcctatgtgtgtctctgcacgtgagatgggtttcctgaatacagcaccctgatgggtcttgactctttatccaatttgccagtctgtgccttttaattggtgcatttagcccatttacatttaaggttactattgttatgtgtgaatttgatgctgtcattatgatgttagctggttattttgctcgttagttgatgcagtttcttcctagcctggatggtctttacaatttggcatgattttgcagtggctggtaccggttgttcctttccatgtttagtgcttccttcaggagctcttttagggcaggcctggtggtgacaaaatctctcagcatttgcttgtccatgaagtattttatttctccttcacttctgaagcttagtttggccggatatgaaattctgggttgaaaattcttttctttaagaatgttgaatattggcccc-actctcttctggcttgtagagtttctgccgagagatcagcagttagtctgatgggtttccctttgtgggtaacctgacctttctctctggctgcccttaacattttttccttcatttcaactttggtgaatatgacaattatgtgtcttggagttgctcttctcaaggagtatctttgtggcattgtctgtatttcctgaatttgaatgttggcctgccttgctagattggggaagttctcctggataatatcctgcagagtgttttccaacttggttccattctccccgtcacttttaggtacaccaattagatgtagatttggtcttttcacatagtcccatatttcttggaggctttgttcatttctttttattcttttttctctaaacttctcttcacgcttcatttcattcatttcttcttccatcgctgatatcccttcttccagttgatcgcatcggttactgcggcttgtgcatttgtcacatagttcttgtgctgtggtttttagctccatcaggtcctttaaggacttctctgcattggttattctagttatccatttatgtaatttttttttcaaagtttttaact i panTro4.chr3 C 0 C 0 e canFam3.chr31 28793055 0 - 39895921 C e nomLeu3.chrUn_GL397991_1 26105 0 - 34861 C e chlSab2.chr22 64645 0 - 101219884 C e papAnu2.chr2 116067 0 + 187378091 C e macFas5.chr2 169445 0 - 192460366 C e rheMac3.chr2 147018 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42400766 6577 + 202140232 I a score=284990.000000 s hg38.chrUn_GL000218v1 155314 1208 + 161147 tctttgccattggttcgaacttcctcctttagctcggagtactttgatcttctgaagtcttcctctctcaactcgtcaaagtcattctccgtccagctttgttccattgctggtgaggagttgcattcctttggaggaggataggcactctgatttttagagtttcctgtttttctgctctg-tttttccccatctttgtggttttatctacctttggtccttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgttggagtttactggaggtctcctccagacactatttgcctggggggtatcagcagtcgtggctgcagaacagtggatattggtgaactgcaaatgctgctgcctgatcgttcctctggaagttttgtctcagaggggtacccggccatgtgaggtgtcagtctgcccctactggggggtgcctccctgttaggctactcggggttcagggacccactaggtgggggttgtctgcccgttctgagatgtcaagctgcgtgctgggagaaccactactctcttcaaagctgtcagacagggacatttaagtctgcagaggttattgctgtcttttgttggtctgtgccctgcccccagaggtggagcctacagaggcaggctggcctccttgagctgtggtggg--ccacccagttcgaacttcctggctgctttgtttacttactcaagcctgagcaatggcgggcgcccctcccccagcctcactgttaccttgcagtttgatctcagactgctgtgctagcaaacagcgaggctctgggggtgtaggaccctccaagccaggtgctggatataatctcctggtgtgccatttgataagcctgttggaaaagcgcagtattagggtgggagtgacctgattttccaggtgccatctgtcaccccttcatttgactaggaaagggaattccctgacccctagtgcttcccaggtgaggtgatgccttgccctgctttggctcatgcatggtgcgctgcaaccactgtcc--------------agcactccccagtgagatgaacctggtacctcagttggaaatgcagaaatcacccgtcttctgcatcactcacgctgggagctgtagactggggctgttcctattcggccatcttggctccaccct s panTro4.chr3 77236938 1204 + 202329955 tatttgccattggttcgaacttcctcctttagcttggagtagtttgatcttctgaagccttcctctctgaactcgtcaaagtcattcaccatccacctttgttccgttgctggtgaggagctgcatttctttggaggaggacaggtgctctgatttttagagtttccagtttttctgttctgttttttctccatcttcgtggttttatctaactttggtctttgatgatggtgacatacagatggggttttggtgtggatgtcctttctgtttgttagttttccttctaacagtcaggaccctcagctgcaggtctgtcagagtttactggaggtccactccagaccctgtttgcct---gtgtatcagcagtggaggctgcagaacagcggatattggtgaaccgcagacgctgctgcctgattgttcctctggaagttttgtctcagaggaatacccggccgtgtgaggtgtcagtccacccctatgggggggtgcctcccagttaggctactcgggggtcagggacccacttga-ggaggcagtcttcccgttctcagatctccagctgcgtgctgggagaaccactactctctgcaaagttgtcagacagggacatttaagtctgcagaggttactgctgtcttttgtttgtctgtgccctgcccccagaggtggagcctacagaggcaggcaggcctccttgagctgtggtgggctccacccagttcgaccttcctggccgctttgtttacctactcaagcctgggcaatggcgggcgcccctcccccagcctcgctcccgccttgcagtttgacctcagactgctgtgctagcaatgagcaaggctccatgggcgtaggaccctcccagccaggtgcgggatataat---ctgttgtgccatttgataatcctgttggaaaagcgcattattagggtgggagtgacacggttttctgggtgccatctgtcacccttttctttgactaggaaagggaattccctgaccccttgtgcttcccaggtgaggcgatgcctcgccctgcttcggctcatgcacggtttgctgcacccactgtcc--------------ggcactccccagtgagatgaacccggtacctcagttggaaatgcagaaatcacctgtcttctgcatcgctcacgctgggagctgtggactggagctgttcctattcggccatcttgtctccaccct i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42407343 1217 + 202140232 tctttgccattggttcgaacttc--tcgttagctcgaattag-ttgatcttctgaag-cttcttctctgaactcgtcaatgtcattctccatccagctttgttccgttgctggtgaggagctgcatttctttggaggaggagaggcactctgatttttagagtttctggtttttctgctctgttttctccccatctttgtagttttatctacctttggtctttgatgatggtgacatacacatggggttttggtatggatgtcctttctgtttgttagtttttcttctaacagtcaggtccctcagctgcaggtctgttggagtttactggaggtccactccagaccctgttttcct---gggtatcagcagcagaggctgcagaacagtggatattggtgaactgcaaatgctgctgcctgatcgttcctctggaagttttgtctcagaggagtacccggctttgtgaggtgtcagtccgtgcttactgggtggtgcctcccagttaggctactcgggggtcagggacccacttga-ggaggcagcctgcctcttctcagatatcaagctgtgtgctgggagaaccactactctcttcaaagctgtcagacagggacatttaagtctgtagaggttattgctgtcttttgattgtctgtgccctgcccccagaggtggagcctaatgaggcaggcaggcctccttgagctgtggcgggatccacggagttcaagcttcctggccgctttgtttaggtactcaagcctgagcaatggtgggcgcccctcccccagccttgcttctagcttgcagtttgatctcagactgctgtgtttgcaatgagcgaggctccgtgggcgtaggaccctccaagccaggtgcaggatataatctcctggcgtgccgtctgataagcctgttggaaaagcacagtattagggtgggcgtgacccggttttccaggtgccatctgtcacccctttctttgactaggaaagggaattccctgaccgcttgtgcttcccaggtgaggcaatgccttgccctgctttggctcatgcatggtgcactgcacccactgtcctgcacccactgtctggcactccctagtgagatgaacctggtacctcagttggaaatgcagaaatcacccatcttctgtgtcgctcacgctgggagctgtagactagagctgttcctattcggccatcttgTCTCCACCCT i ponAbe2.chr3 I 6577 C 0 e canFam3.chr31 28793055 0 - 39895921 C e nomLeu3.chrUn_GL397991_1 26105 0 - 34861 C e chlSab2.chr22 64645 0 - 101219884 C e papAnu2.chr2 116067 0 + 187378091 C e macFas5.chr2 169445 0 - 192460366 C e rheMac3.chr2 147018 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=600.000000 s hg38.chrUn_GL000218v1 156522 1 + 161147 c s panTro4.chr3 77238142 1 + 202329955 c i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42408560 1 + 202140232 C i ponAbe2.chr3 C 0 C 0 s chlSab2.chr22 64645 1 - 101219884 C i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28793055 0 - 39895921 C e nomLeu3.chrUn_GL397991_1 26105 0 - 34861 C e papAnu2.chr2 116067 0 + 187378091 C e macFas5.chr2 169445 0 - 192460366 C e rheMac3.chr2 147018 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=5211.000000 s hg38.chrUn_GL000218v1 156523 4 + 161147 TAAT s panTro4.chr3 77238143 4 + 202329955 TAAT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42408561 4 + 202140232 TAAT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 26105 4 - 34861 TAAT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s macFas5.chr2 169445 4 - 192460366 TAAG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116067 4 + 187378091 TAAG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64646 4 - 101219884 TAAG i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28793055 0 - 39895921 C e rheMac3.chr2 147018 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=72492.000000 s hg38.chrUn_GL000218v1 156527 31 + 161147 TTTTAACTTTCAAAAGATTAGATACATTTAC s panTro4.chr3 77238147 31 + 202329955 TTTTAACTTTCAGAAGATTAGATGCATTCAC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42408565 31 + 202140232 TTTTAACTTTCAAAAGACTGGATACATTCAC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 26109 31 - 34861 TTTTAACTTTCAAAAGATAAGATACATTCAC i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 147018 31 + 192599291 TTTTAACTTTCAAAAGATTAGATACATTCAC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 169449 31 - 192460366 TTTTAACTTTCAAAAGATTAGATACATTCAC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116071 31 + 187378091 TTTTAACTTTGAAAAGATTAGATACATTCAC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64650 31 - 101219884 TTTTAACTTTCAAAAGATTAGACACATTCAC i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28793055 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2561556.000000 s hg38.chrUn_GL000218v1 156558 981 + 161147 CCTCCTCTGAATTTT-AATTCCTGATGGAAAGATTGTGAAATCTCAAGAGGATAATGAATCAGCTTCTGATTATATTCT-GGAATTGCTATTTGATCACACATCCAAGAATGCGTATTCACTTTCCTTTACATTACACACATGCATAATACCATGCTGAGTGATGCTGGAAAA-AGTGAGTCTTCAGTAATGCCCTCATGAAATTA-CAGTCTCACTACACTGAGGTATTTTCTTTTTAACCCTTTCTTTCTTTTCTGCTGTGAATATGTGCCTTCTAAGAGGTGAACAAC-GGGAAAAACTGAAAAAGATCCTTCATCTAATTCAGTAACTAGTTTTTGTATCTTCTAAAAATTTTTATCTCCAGAAAGCTCTAATTTTCA-TTCCTTTACAAGCTTTATTTCTCTCT--CCTTTCCAACACCAGACTTTGCTCTGTTTGTTTTCTATATCTTTTT--TAGAGATGCCTACAATAG-AAAAAA------TCTATGACATATTCAATACATCTGAAAAGTTTACATTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAAAAAC--AATAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATCTTTATAATCCATCTGTTACAATTCCACACAGCAAATTACAAGTAATTGTGAAGTTTCCCCTCATTTTATA-GGTTTGG--------TCTTAT-AAGGCA--TACAACACAAATTTTAATTAC-TTTTCTTTTTGGTATTTGGATCTTAATTTGGTCAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGAGACATACAGTCTTCTTC----TAGCTTTGTTGATGTGAATATTACTGTGTATTTTTCATTCACTTATTATTTTACAAGGCATG----CTTCATTAAAAATATATCAGCATCTCATTGACAAATCACAAAATTTAAAAGGCACCAG------------AAAAAAACAATTTATTTAAAACATTCCTGTGTAAAAGTAGTCACCACT s panTro4.chr3 77238178 980 + 202329955 CCTCTTCTGAATTTT-AATTCCTGATGGAAAGATTGTGAAATCTGAAGAGGATAATGAATCAGCTTCTGATTATATTCT-GGAATCATGATTTGATCACCCATCCAAGAATGAGTATTCACTTTCCTTTACATTACACACATGCATAATACCATGCTGAGTGATGCTGGAAAA-GGTGAGTCTTCAGTAATGCCTTCGTGAAATTA-CAGTCTCACTATACGGAGGTATTTTCGTTTTAACCCTTTCTTTCTTTTCTGATGTGAATATGTGCCTTCTAAGAGATGAACAACTGGGAAAAACTGAAAAAGAACCTTCATCTAATTCAGTAACTAGCTTTTGTATCTTCTAAGAATTTTTGTCTCCAGAAAGCTCTGATTTTCA-TTCCTTTACAAGCTTTATTCCTCTCT--CCTTTCCAACACCAGACTTTGCTGTGTTTGTTTTTTGTACCTTTTT--TAGAGACGCCTACAATAGAAAAAAA------ACCATGACATATTCAATACATCTGAAAATTTTGCATTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAAAAAC--AATAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATATTTATAATCCATCTGTTACAATTCCACAGAGCGAATTACAAGTAATTGTGAAGTTTCCCCTCATTTTATA-GGTTTGG--------TCTTGT-AAGGCA--TACAACACAAATTTTAATTAC-TTTTCTTTTTGGTATTTGGGTCTTAATTTGGTCAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGAGACATGCAG---TCTTC----TAGCTTTGTTGATGTAAATATTACTGTGTATTTTTCATTCACTTATTATTTTACAAGGCATG----CTTCATTAAAAATATGTCAGCATCTCATTGACAAATCACTAAATTTAAAAGACACAAG------------AAAAAAACAATTTATTTAAAACATTCCTATGTAAAAGTAGTCACCACT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42408596 984 + 202140232 TCTCTTCTGAATTTT-AATTCCTGATGGAAAGATTGTAAAATCTCAAGAGGATAATGAATCAGCTTCTGA-TATATTCT-GGAATCATGATTTGATCACCCATCCAAGAATGAGTATTCACTTTCCTTTACATTACATGCATGCATAATACCATGCTGAGTGATGCTGGAAAA-GGTGAGTCTTCAGTAATGCCTTCATGAAATTA-CAGTCTCACTACACTGATGTATTTTCTTTTTAACCCTTTCTTTATTTTCTGCGGTGAATAAGTGACTTCTAAGACATGAACAAATGGGAAAAACTGAAAAAGAACCTTCATCTAATTCAGTAACTACCTTTTGTGTCCTCTAAGAATTTTTGTCTCCAGAAAGCTCTAATTTTCA-TTCCTTTACAAGATTTATTTCTCTCT--CCTTTCCAACACCAGACTTTGCTCTGTTTG-TTTCTCTAACTTTTT--TAGAGATACCTACAATAG-AAAAAA------ACTATGACATATTCAATACATCTGAAAATTTTGCATTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAAAAAA-GAATAAAAATATGAACCAAGAAAGCACAGAAGGTAATAACCACATTTAGATATTTATCATGGAATCATCTTTATAATCCATCTGTTACGATTCCACAGTGCAAATTACAAGTAATTGTGAAGTTTCCCCTCATTTTATAGGGTTTGA--------TCTTGTAAAGGCA--TACAACACAAGTTTTATTTACTTTTTCTTTTTGGTATTTGGATCTTAATTTGGTCAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGGGACATGCAGTCTTCTTC----TAGCTTTGTTGATGTAAATATTACTGTGTATTTTTCATTCACTTATTATTTTACAAGGCATG----CTTCATGAAAAATATGTCAGTATCACATTGACAAATCACAAAATTTAAAAGGCACAAG------------AAAAAAACAATTTATTTAAAACATTCCTGTGTAAAAGTAGTCACCACT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 26140 970 - 34861 CCTCTTCTGAATTTT-AATTCCTGATGCAAAGATTATGAAATCTCGAGAGGATAGTGAATCAGCTTCTGATTATATTCT-GGAATCACGATTTGATCACCCATCTAAGAATGCGTATTCACTTTCCTTTACATTACACACATGTGTAATACCATGCTGAGTGATGTTGGGAAA-GGTGAGTCTTCAGTGCTGCCTTCATGAAGTTA-CAGTCTCACCACACCTAGGTATTTTCTCTTTAACCCTTTC----TTTTCTGCTGTGAATAAGTGC---CTAAGAGGTGAACAAGTGGGAAAAACTGAAAAAGAACCTTCATCTAATTCAGTAACTAGCTTTTGTATCTTCTAAGAATTTTTGTCTCCAAAAAGCTCTAATTTTCA-TTCCTTTACAAGATTTATTTCTCTCT--CCTTTCCAACACCAGACTTTGC--TGTTTGTTTTCTCTACCTTTTT--TAGAGACGCCTACAATAG-AAAAAA------ACTATGACATATTCAATACATCTGAAAATTTTGCATTGCCATAAATAAGAATGAATTATCTGTTTATAAAGAAAAA----AATAAAAATATGAACCGAGAAAGCACAGAAGGAAGTAACCACATTTCCACGTTTACCATGGAATCATCGTTATAATCCATCTGTTACAACTGCACAGAGCAAATTACAA-TAATTGTGGAGTTTCCCCTCATTTTATA-GGTTTGG--------TCTTGT-AAGGCA--TACAACACAAATTTTATTTAC-TTTTCTTTTTGGTATTTGGATCTTAATTTGGTCAAGTGGCCACTGGGTGGATGATGGAGCCTCTTGGGACATACAGTCTTCTTC----TAGTTTTGTTGATGTAAATATTACTGTGTGTTTTTCATTCACTTGTCATTTTACAAGGCATG----CTTCATTAAAAATATGTCAGCATCACATTGACAACTCACAAAATTTAAAAGGCACAAG------------AAAATAACAATTTATTTAAAACATTCCTGTGTAAAAGTAGTCACCACT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 147049 972 + 192599291 CCTCTTCTGAATTTT-AATTCCTGATGCAAAGATTATGAAATCTCAAGAGGATAATGATTCAGCATCTGATTATATTCT-GGAGTCACGATTTGATCACCCATCCAAGAATGTGTATTCACTTTTCTTTACGTT----GCATTCTTAATACCATGCTGAGTGGTGCTAGAAGA-GGTGAGCCTTCAGCAATGCCTTCATGAAACTA-CCGTCTCACTACACCGAGGTATTTCCTTTCTGACCCTTTC----TTTTCTGCTGTGAATAAGTGCCTTCTAAGAGATGAACAAGTGGGAAAAACTGAAAAAGGACCTTCATCCAATTCAGTAACTAGTTTTTGTATCTTCTAAGAATTTTTGTCTACAAAAAGCTCTAATTTTCA-TTCCATTACAAGTTTTATTTCTCTCT--CCTTTCCAACACCAGACTTTTCCCTGTTTGTTTTCTCCACCTTTTT-ACAGAGACGCCTACAATAG-AAAAAA------AGTATGACATGTTCAAAACATCTGAAAATTTTACATTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAGAAAA-CGTTAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATCTTTACAATCCATCTGTCACAATTCCACAGAGCGAATTACAAGTAATTGTGAAGTTTCCCCTCATTTCATG-GGTTTGG--------TCTTGT-AAAGCA--TATGACACAAATTTTATTTGC-TTTTCTTTTTGGTATTTGGATCTTAATTTGGTTAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGGGACATACAGTCTTCTTC----TAGCTTTGTTGATGTAAATATTACTGTATATTTTTCATTCACTTATTATTTTATGAGGCATA----CTTCATTAAAAATATGTCAGCATCACATTGACAAATCACAAAATTTTAAAGG----AG------------AAAAAAACAATTTATTTAAAGCATTCCTGTGTAAAAGTAGTCACCACT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 169480 972 - 192460366 CCTCTTCTGAATTTT-AATTCCTGATGCAAAGATTATGAAATCTCAAGAGGATAATGATTCAGCATCTGATTATATTCT-GGAGTCACGATTTGATCACCCATCCAAGAATGTGTATTCACTTTTCTTTACGTT----GCATTCTTAATACCATGCTGAGTGGTGCTAGAAGA-GGTGAGCCTTCAGCAATGCCTTCATGAAACTA-CCGTCTCACTACACCGAGGTATTTCCTTTCTGACCCTTTC----TTTTCTGCTGTGAATAAGTGCCTTCTAAGAGATGAACAAGTGGGAAAAACTGAAAAAGGACCTTCATCCAATTCAGTAACTAGTTTTTGTATCTTCTAAGAATTTTTGTCTCCAAAAAGCTCTAATTTTCA-TTCCATTACAAGTTTTATTTCTCTCT--CCTTTCCAACACCAGACTTTTCCCTGTTTGTTTTCTCCACCTTTTT-ACAGAGACGCCTACAATAG-AAAAAA------AGTATGACATGTTCAAAACATCTGAAAATTTTACATTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAGAAAA-CGTTAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATCTTTACAATCCATCTGTCACAATTCCACAGAGCGAATTACAAGTAATTGTGAAGTTTCCCCTCATTTCATG-GGTTTGG--------TCTTGT-AAAGCA--TATGACACAAATTTTATTTGC-TTTTCTTTTTGGTATTTGGATCTTAATTTGGTTAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGGGACATACAGTCTTCTTC----TAGCTTTGTTGATGTAAATATTACTGTATATTTTTCATTCACTTATTATTTTATGAGGCATA----CTTCATTAAAAATATGTCAGCATCACATTGACAAATCACAAAATTTTAAAGG----AG------------AAAAAAACAATTTATTTAAAGCATTCCTGTGTAAAAGTAGTCACCACT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 116102 969 + 187378091 CCTCTTCTGAATTTT-AATTCCTGATGCAAAGATTATGAAATCGCAAGAGGATAATGAATCAGCATCTGATTATATTCT-GGAGTCACGATTTGATCACCCATCCAAGAATGTGTATTCACTTTTCTTTACGTT----GCATTCTTAACACCATGCTGAGTGGTGCTGGAAGA-GGTGAGCCTTCAGCAATGCCTTCATGAAACTA-CAGTCTCACTACACCGAGGTATTTCCTTTCTGACC--TTC----TTTTCTGCTGTGAATAAGTGCCTTCTAAGAGATGAACAagtgggaaaaactgaaaaagaaccTTCATCCAATTCAGTAACTAGTTTTTGTATCTTCTAAGAATTTTTGTCTCCAAAAAGCTCTAATTTTCA-TTCCATTCcaagttttatttctctct--cctttccaacATCAGACTTTTCCCTGTTTGTTTTCTCCACCTTTTT-ACAGAGACGCctacaatag-aaaaaa------agtatgACATATTCAAAACATCTGAAAATTTTGCATTGCCATAGATAAGAGTGAATTAtctgtttataaagaaaaaaa--attaaaaatatgaaccaAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATCTTTACAATCCATCTGTCACAATTCCACAGAGCAAATTACAAGTAATTGTGAAGTTTCCCCTCATTTCATG-GGTTTGG--------TCTTGT-AAAGCA--TGTGACACAAATtgtatttgc-tttcctttttggTATTTGGATCTTAATTTGGTTAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGGGACATACAGTCTTCTTC----TAGCTTTGTTGATGTAAATATTACTGTATATTTTTCGTTCACTTATTATTTTATGAGGCata----cttcattaaaaatatgtcaGCATCACATTGACAAATCACaaaattttaaagg----ag------------aaaaaaacaatttatttaaagCATTCCTGTGTAAAAGTAGTCACCACT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 64681 970 - 101219884 CCTCTTCTGAATTTT-AATTCCTGATGCAAAGATTATGAAATCTCAAGAGGATAATGAATCAGCATCTGATTATATTCT-GGAGTCACGATTTGATCACCCATCCCAGAATGTGTATTCACTTTTCTTTACATT----GCATTCTTAATACCATGCTGAGTGGTGCTGGAAGA-GGTGAGCCTTCAGTAATGCCTTCATGAAACTA-CAGTCTCACTACACCGAGGTATTTTCTTTTTGACCCTTTC----TTTTCTGCTATGAATAAGTGCCTTCTAAGAGATGAACAAGTGGGAAAAACTGAAAAAGAA-CTTCATCCAATTCAGTAACTAGTTTTTGTATCTTCTAAGAATTTTTGTGTCCAAAAAGCTCTAATTTTCA-TTCCATTACAAGTTTTATTTCTCTCT--CCTTTCCAAC--CAGACTTTTCCCTGTTTGTTTTCTCTACCTTTTT-ACAGAGACGCCTACAATAG-AAAAAA------AGTATGACATATTCAAAACATCTGAAAATTTTGCTTTGCCATAGATAAGAATGAATTATCTGTTTATAAAGAAAAAAG-CGTTAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGATGTTTATCATGGAATCATCTTTACAATCCATCTGTCACAATTCCACAGAGCAAATTACAAGTAATTGTGAAGTTTCCCCTCATTTCATG-GGTTTTG--------TCTTGT-AAAGCA--TATGACACAAATTTTATTTGC-TTTTCTTTTTGGTATTTGGATCTTAATTTGGTTAAGTGGCCACTGGGTAGATGATGGAGCCTCTTGGGACACACAGTCTACTTC----TAGCTTTGTTGATGTAAATATTACTGTATATTTTTCATTCACTTATTATTTTATGAGGCATA----CTTCATTAAAAATATGTCAGCACCACATTGACAAATCACAAAATTCAAAAGG----AG-----------AAAAAAAACAATTTATTTAAAGCATTCCTGTGTAAAAGTAGTCACCACT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28793055 999 - 39895921 CTTCCTTTGAATTTTCAATTTTAGATACTAAGATTATGGGATCTCAAGAGAAAAATGAATCAGTGTCTGATTCTATTCTGGGAATCACGATCTGATCATCCGTCCAACAATGTGTGTTAATTTTCCTTCACATTGCACACATACATAATGCCAGGTTAAGTAGTGCTAGAAAAGGGTGCATCTTCAGGAACATCTTCATGAAATGGTCAGTCTCATCACACCTAAGTATTTTATTTTTAAACCCCTCTTTCTTTTCTGCTATCAATAAATGTCTTCCAAGAGATGAACAAACAGGAAAACCTAGAAAAGAACCTTAGTCTAGTTAAGTAACTAGCTCCTGTCTCTCTTACGAATTTTTGTTTTCAAA------TAATTCTCACTTCCTCTTCAAGCTTTATTTTTCTTTACCCTTTCCCACACCAGACTTTCC--TGTTTGTTTTCTCTACCTTTTAAAAATAGACACCTACAGTAA-AGAAAAAAAAAAACTGTGACATTTCCAATGCAGCTACAAATTTTGTA--GCTACAGAAAAGAAAGTATTATCTGCTTATGAAGAAAAAAAACAATAAAAATATGAACCAAGAAAGCACAGAAGGTAGTAACCACATTTAGTTGTTTATCATGGAATCATCTTTATAATCCATCTGTTTCAACTCCACAGAGCAAATTATGAATAATTAGGAAGTTTCTCCTCATTTTATA-GATTTGGGCTGTGAAGCTTGT-AAGGCAAGTACAACACAAATATTATTTAC-TTTTTCCC----CATTTGGATTTTAATTTGGGTAAATGGCTACCGGGTGGATGATGGAGGCTTGTGGAACATACAGATGGCTTCCCCACACTTTTGATGATGACAGTA-------GTATTTTCCATTCTCTTTTTATTAAAAAAAACAAAAAACCTTCATTTAAAAAGAG--AGCATTATATCAACAAATCATAAAATTTAAAAGCCACAAAGAAACCTAGGTAAAAAAAAAAA-------AAAAAGTTCCTACGTAAAATTAGTTACCACT i canFam3.chr31 C 0 I 125 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=872452.000000 s hg38.chrUn_GL000218v1 157539 341 + 161147 CTTACT---------------------------------------------------------------ATTCTTCAA--------ATATTTTTATTATATTTAAAAACAAGCCTAGTTTTATCTCGAGTGTCTGACCTTGATGATATTGTACATTTTAAACTTAG-AAAAATTGAACTCTATTGGAAATTTCCTACAGATCAGCTTTTCTAGATGCCAAGCGCC---------------TTGTTTCAGCCATGGTGATGACAGCAAATTGGGTTCTCAGGGATTCTGGCCTCTGGCATCATCTCAGTTATTTATAATTGAAGTTGGGTCTGATGAGAACGCAGCTTAGATGCATGGTGGGACTGCTGGGCTTAAGGCTGGCCTGCCAGGAGGTTGCATTGAGGTGTAACTAGGCAAAGAAAGAAGGA s panTro4.chr3 77239158 342 + 202329955 CTTACT---------------------------------------------------------------ATTCTTCAA--------ATATTCTTATTCTATTTAAACGCAAGCCTAGTTTTATCTCGAGCGTCTGACCTTGATGATATTGTACACTTTAAACTTAGAAAAAATTGAACTCTATTGGAAATTTCCTACACATCAGCTTTTCTAGATGCCAAGTGCC---------------TTGTTTCAGCCACGGTGATGACAGCAAATTGGGTTCTCAGGGATTCTGGCCTCTGGCATCGTCTCAGTTGCTTATAATTGAAGTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGGCTTAAGGCTGGCCTGCCAGGAGGTTGCATTGAGGTGTAACTAGGCAAAGAAAGAAGGA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42409580 342 + 202140232 CTTACT---------------------------------------------------------------ATTCTTCAG--------GTATTTTTATTCTATTTAAATGCAAGCCTAGTTTTATCTCGAGTGTCTGACCTTGATGATATCGTGTACTTTAAACTTAGAAAAAATTGAACTCTTTTGGAAATTTCCTACACATCAGCTTTTCTAGATGCCAATAGTC---------------TTGTTTTAGCCATGGTGATGGCAGCAAAGTGGGTTCTCAGGGATTCTGGCCTCTGGCATCATCTCAGTTGTTTATAATTGAAGTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGGCTTAAGGCTGGTCTACCAGGAGGTTGCCTTGAGGTGTAACTAGGCAAAGAAAGAAGGA i ponAbe2.chr3 C 0 I 1 s nomLeu3.chrUn_GL397991_1 27110 341 - 34861 CTTACT---------------------------------------------------------------ACTCTTCAA--------CTATTTTTATTCTATTTAAATGCAAGCCTAGTTTTATCTCGAGTGTGTGACCTTGATGATATGGTATACTTTAAACTTAGAAAAAATTGAACTCTATTGGAAATTTCCTACAGATCAGCTTTTCTAGACGCCAAGCGCC---------------TTGTTTTAGCCACGGTGATGACAGC-AATTGGGTTCTCAGGGATTCTGGCCTCTGGCATCATCTCAGTTGTTTATAATTGAATTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGGCTTAAGGCTGGCCTGCCAGGAGGTTGCCTTGAGGTGTAACTAGGCAAAGAAAGAAGGA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148021 339 + 192599291 CTTACT---------------------------------------------------------------ATTCTTCAA--------ATATTTTTATTCTATTTAAATGCAAGTCTAGTTTTATCTCAGGTGTCTGATCT---TCATATTGTACACTTTAAACTTAGAAAAAATTGAACTCTATTAAAAATTTCCTACAGATCAGCTTTTCTAGATGCCAAGCACC---------------TTGTTTTGGCCACAGTGATGACAACAAATTGGGTTCTCAGGGATTTTGGCCTCTGGCATCATCTCAGTTGTTTATGATTGAAGTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGACTTAAGGCTGGCCTGCCAGGAGGTTGCCTTGAGGTGTAACTAGGCAAAGAAAGAAGGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 170452 339 - 192460366 CTTACT---------------------------------------------------------------ATTCTTCAA--------ATATTTTTATTCTATTTAAATGCAAGTCTAGTTTTATCTCAGGTGTCTGATCT---TCATATTGTACACTTTAAACTTAGAAAAAATTGAACTCTATTAAAAATTTCCTACAGATCAGCTTTTCTAGATGCCAAGCACC---------------TTGTTTTGGCCACAGTGATGACAACAAATTGGGTTCTCAGGGATTTTGGCCTCTGGCATCATCTCAGTTGTTTATGATTGAAGTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGACTTAAGGCTGGCCTGCCAGGAGGTTGCCTTGAGATGTAACTAGGCAAAGAAAGAAGGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117071 339 + 187378091 ATTact---------------------------------------------------------------attcttcaa--------atatttttattctatttaaatgCAAGTCTAGTTTTATCTCAGATGTCTGATCT---TCATATCATACACTTTAAACTTAGAAAAAATTGAACTCTATTAAAAATTTCCTACAGATCAGCTTTTCTAGATGCCAAGCACC---------------TTGTTTTAGCCACAGTGATGACAACAAATTGGGTTCTCAGGGATTTTGGCCTCTGGCATCATCTCAGTTGTTTATGATTGAAGTTGGCTCTGATGAGAACTCAGCTTAGATGCATGGTTGGACTGCTGGACTTAAGGCTGGCCTGCCAGGAGGTTGCCTTGAGGTGTAACTAGGCaaaaaaaGAAGGA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 65651 339 - 101219884 ATTATT---------------------------------------------------------------ATTCTTCAA--------ATATTTTTATTCTATTTAAATGCAAGTCTAGTTTTATCTCAGGTGTCTGATCT---TCATATCGTACACTTTAAACTTAGAAAAAATTGAACTCTATTAAAAATTTCCTACAGATTAGCTTTTCTAGACGCCAAGCACC---------------TTGTTTTAGCTACAGTGATGACAACAAATTGGGTTCTCAGGGATTTTGGCCTCTGGCATCATCTCAGTTGTTTATAATTGAAGTTGGCTCTGAGGAGAACTCAGCTTAGATGCATGGTTGGACTGCGGGACTTAAGGCTGGCCTGCCAGGAGGTTGCCTTGAGGTGTAACTAGGCAAAGAAAGAAGGA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28794179 418 - 39895921 cctacttctccctctgcctgtgtctctgcctctctttctcagtctgtgtctctcatgaataaataaataaatctttaaTAATATGTATATTTTTACCTCCTTTAAATGTAAGTCTAGCTCTATCCCAGTTTTGTAGCCCTGATGATA----AAAATTTGAAACTAAAGAAAAAAGATCTCTATTGGGCATTGCCTACATATCAGCTTATTTATATGCTAAATACCtttatttttttttatttttttaaGGCCTCATGATAGCAGCAAGTCAGGTAGTCA-GAACTCTGGCCTCTGGTATGGTCTTGATTGATTATAAC-----CTATCTTTGATGAGGGCTCCACTGAGGTGCATGATTGGGCACTTGGGCTTAAGGGTGACCTGCTCAGAGGTTGCCTTGAGATCTAACTCAACAAGGAGAGAGAAG i canFam3.chr31 I 125 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=1584.000000 s hg38.chrUn_GL000218v1 157880 8 + 161147 gtttattg s panTro4.chr3 77239500 8 + 202329955 gtttattg i panTro4.chr3 C 0 C 0 s canFam3.chr31 28794597 8 - 39895921 GTTGGTTG i canFam3.chr31 C 0 C 0 e nomLeu3.chrUn_GL397991_1 27451 0 - 34861 C e chlSab2.chr22 65990 0 - 101219884 C e papAnu2.chr2 117410 0 + 187378091 C e macFas5.chr2 170791 0 - 192460366 C e rheMac3.chr2 148360 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42409922 1 + 202140232 I a score=36189.000000 s hg38.chrUn_GL000218v1 157888 449 + 161147 agacattactgacaatagcaaagacttggaaccaacccaaatatccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccat-aaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcacaaggacaaaaaaacaaacaccacatgttctcactcataggtgggaattaaacaatgagaacacatggacacaggaagaggaacagcacacactggggcctgttgtggggtgaagggctaggggagggaaagcattaggatatatacctaatgtaaatgacgagttaatgggtgcagcacaccaacatgtcacatgtatacatatgaaacgaacctgcacgttgtgcacatgtgccctagaacttaaagtataacacaaa------aaagaaGG- s panTro4.chr3 77239508 456 + 202329955 cggtactactcacaatagcaaagacttggaaccaacccaaatgtccaacaatgatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaagccaaacacagcatgttctcactcataggtgggaattgaacaatgagaacacatggacacaagaaggggaacatcacacaccaaggcctgttgtggggtgaggggctaggggagggaaagcattaggagatatacctaatgtaaatgatgagttaatgggtgcagcac-ccaacatggcacatgtatacctatgtaacaaacctgcacgttgtgcacatgtaccctagaacttaaagtataataaaaaaaaaTGAAAGAAGGA i panTro4.chr3 C 0 C 0 e canFam3.chr31 28794605 0 - 39895921 C e nomLeu3.chrUn_GL397991_1 27451 0 - 34861 C e chlSab2.chr22 65990 0 - 101219884 C e papAnu2.chr2 117410 0 + 187378091 C e macFas5.chr2 170791 0 - 192460366 C e rheMac3.chr2 148360 0 + 192599291 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42409922 1 + 202140232 I a score=2100.000000 s hg38.chrUn_GL000218v1 158337 1 + 161147 G s panTro4.chr3 77239964 1 + 202329955 G i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 27451 1 - 34861 G i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148360 1 + 192599291 G i rheMac3.chr2 C 0 C 0 s macFas5.chr2 170791 1 - 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117410 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 65990 1 - 101219884 G i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28794605 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I e ponAbe2.chr3 42409922 1 + 202140232 I a score=33284.000000 s hg38.chrUn_GL000218v1 158338 14 + 161147 GTTGGGCAAAATTA s panTro4.chr3 77239965 14 + 202329955 GTTGGGCAAAATTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42409923 14 + 202140232 GTTGGGCAAAATTA i ponAbe2.chr3 I 1 C 0 s nomLeu3.chrUn_GL397991_1 27452 14 - 34861 GTTGGGCAAAATTA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148361 14 + 192599291 GTTGAGCAAAATTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 170792 14 - 192460366 GTTGAGCAAAATTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117411 14 + 187378091 GTTGAGCAAAATTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 65991 14 - 101219884 GTTGAGCAAAATAA i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28794605 0 - 39895921 C e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=281762.000000 s hg38.chrUn_GL000218v1 158352 118 + 161147 CCAACAATCTTCAACTATGAATTTGTA------TGAGTAGGGGCTTCCCACACCATCAGGCACTCCAAGTTGGAGAAACAAGGGATGTTGAATTGAAAGTTTAATTTTTTAGGCTTGATAGTCA s panTro4.chr3 77239979 118 + 202329955 CCAACAATCTTCAACTATGAATTTTTA------TGAATAGGGGCTTCCCACATCATCAGGCACTCCGAGCTGGAGAAACAAGGGATGTTGAATTGAAAGTTTAATTTTTTAGGCTCAATAGTCA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42409937 118 + 202140232 CCAACAATCTTCAATGATGAATTTTTA------TGAGTAGGGGCTTCCCACACCATCAGGCACTCCGAGCTGGAGAAACAAGGGATGTTGAATTGAAAGTTTAATTTTTTAGGCTTGATAGTCA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 27466 118 - 34861 CCAACAATCTTCAACTATGAATTTTTA------TGAGTAGGGGCTTCCCACACCATCAGGCACTCTGAGCTGGAGAAACAAGGGATGTTGAATTGAATGTTTAGCTTTTTAGGCTTGATAGTCA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148375 120 + 192599291 CCAACAATCTTCAACTATGAATTTTTATTTTTGTGAGTAGAGGCTTCCCACACCGTCAGGCACTCTGAGCTGGAGAAACAGGGGATGTCGAATTGAACGTTTACGTTTCTAGGTTTGAT----A i rheMac3.chr2 C 0 C 0 s macFas5.chr2 170806 120 - 192460366 CCAACAATCTTCAACTATGAATTTTTATTTTTGTGAGTAGAGGCTTCCCACACCGTCAGGCACTCTGAACTGGAGAAACAGGGGATGTCGAATTGAACGTTTACGTTTTTAGGTTTGAT----A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117425 120 + 187378091 CCAACAATCTTCaactatgaatttttatttttgtgagtagGGGCTTCCCACACCGTCAGGCACTGTGAGCTGCAGAAACAGGGGATGTCGAATTGAACGTTTACGTTTTTAGGTTTGAT----A i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 66005 119 - 101219884 CTAACAATCTTCAACTATGAATTTTTATTTTTGTGAGTAGTGGCTTCCCACACCATCAGGCACTCTGAGCTGGAGAAACA-GGGATGTCGAATTGAACATTTACGTTTTTAGGTTTGAT----A i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28794605 117 - 39895921 CTAACAATTTTGAACTATGAGTTGTTT------TGAGTC-AAGCTTCCAACACCATCAAACATCCTGATATGAAGAAACAAAGGATGGTGAGTTGAGCATTTAGTTTGTTTGAGTTGGCAGttt i canFam3.chr31 C 0 I 258 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=385595.000000 s hg38.chrUn_GL000218v1 158470 151 + 161147 GATTAGGGAAGTTTTGGGTACATCTTTCCCACTCTAGAGCCCTCTCCCTAACTCAGGGCCAATTTGGGACATgggctcaatggaaaagagtgcctagatcaattagaaatatccatcatgaacataggaggcaggCATTCTGG-CCAAGGGG s panTro4.chr3 77240097 150 + 202329955 GATTAGGGAAGTTTTGGGTACACCTTTCCCACTCTAGAGCCATCTCCCTAACTCAGGGCCAATTTGGGGCATgggctaaatggaaaagagtgccaagatcaattagaaatatccatcatgaacataggaggtaggCATTCTGG-CCAA-GGG i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42410055 150 + 202140232 GATTAGGGAAATTTTGGGTACACCTTTCCCATTCTAGAGTCCTCTCCCTAACTCAGGGCCAACTTGGGACAtgggttcaatggaaaagagtgccaagatcaattagaaatatccatcacgaacataggaggCAGGCATTCTGG-CCAA-GGG i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 27584 150 - 34861 GATTAGGGAAGTTTTGGGTACACCTTTCCCACTCTAGAGTCCTCTCCCTAACTCAGGGCCAATTTGGGACGTgggctcaatggaaaagagtgccgagatcaattagaaatatccatcatgaacataggaggcaggCATTCTGG-CCAA-GGG i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148495 149 + 192599291 GATTAGGGAAGTTTTGGGTAAACCTTTCCCTCCCTAGTGTCTTCTCCTTAACTTAGGGCCAACTTGGGACATGGGTTCAATGGAAAAGAGTGCCAAGATTAATGAGAAATATCCATCATGAACACCGG-GGCAGACATTCTGG-CCAA-GGG i rheMac3.chr2 C 0 C 0 s macFas5.chr2 170926 149 - 192460366 GATTAGGGAAGTTTTGGGTAAACCTTTCCCTCCCTAGTGTCTTCTCCTTAACTTAGGGCCAACTTGGGACATGGGTTCAATGGAAAAGAGTGCCAAGATTAATGAGAAATATCCATCATGAACACCGG-GGCAGACATTCTGG-CCAA-GGG i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117545 149 + 187378091 GATTAGGGAAGTTTTGGGTAAACCTTTCCCTCCCTAGTGTCTTCTCCGTAACTTAGGGCCAACGTGGGACATGGGCTCAATGGAAAAAGGTGCCAAGATTAATGAGAAATATCCATCATGAACATCGG-GGCAGACATTCTGG-CCAA-GGG i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 66124 150 - 101219884 GAATAGGGAAGTTTTGGGTACACCTTTCCCTCCCTAGTGTCTTCTCCTTAACTTAGGGCCAACTTGGGACATGGGCTCAATGGAAAAGAGTGCCAAGATTAATGAGAAATATCCATCATGAACATTGGAGGCAGACATTCTGG-CCAA-GGG i chlSab2.chr22 C 0 I 131 s canFam3.chr31 28794980 148 - 39895921 GAATAGGGAATTTTTGGATAAACAATTTCCAATTT--TTTATTCTACCTAATTCAGAGCCAATTTGGTACATGGGCTCAATGGAAAACAGTGCTGAGATCCAGCAGAAATACTCATT-TGAGCATAGGAGATAGTCCTTCTAGTCCAA-GTG i canFam3.chr31 I 258 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2800.000000 s hg38.chrUn_GL000218v1 158621 1 + 161147 G s panTro4.chr3 77240247 1 + 202329955 G i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42410205 1 + 202140232 G i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 27734 1 - 34861 G i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148644 1 + 192599291 G i rheMac3.chr2 C 0 C 0 s macFas5.chr2 171075 1 - 192460366 G i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117694 1 + 187378091 G i papAnu2.chr2 C 0 C 0 s canFam3.chr31 28795128 1 - 39895921 G i canFam3.chr31 C 0 C 0 e chlSab2.chr22 66274 131 - 101219884 I e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=2493879.000000 s hg38.chrUn_GL000218v1 158622 970 + 161147 TGCATCTTCCCACTTTGTAATCCAGAGAGCGATTTCTTCTTGCTATCTGTCCCTCCATAAATAAGCGTTGGGTGAAGGACAAGCTAGTTACCATTGAGGATGGAATGAAATTCTACCAGAATTGCAAAATGAACTGAGAGCCACGAAAGTGTTCCTCTGTGAACCAGCAGAGAGATCTGTGGAAGGCAAAGGAAGAGGAGCCAAGaggccagataacattcctgcttcccctacattgtgagagtgaaattgtcagcaacctatatcagtaattaaccagaggctttttggagagtaagacttctgatagatacctcaatagctgaagttgctcttcagtactgcacataacctgtggacagatttTCATCGTTATTAATTCATTTATTCAACAGATAGATATTAAATTCAAGGCATAGTTCTAAACTATGCAGTCAATTACAAAA---AAATAATAATGAAGGACATTAGCTCTGCCTCATAGGACGTT-AAAACTCTAGCTGCTAAATGAGACAAATAGG----GTTCCCACATCAAGTGCCTGGGCTCCTGTTATAACCTGGACTCTGCTTCCATTGGCTTCTCTTGTTTCTGTTTTGATAAACCCATCATTTGGCTTAGTCCCTACCCTTTCCATGCT-CACCCACCAGTAGGTGGACCTCCTTGACCATAACTACAGACATAGATCTTTGATTGTTT-CTTTTCAAATGTTTG-CTTACTTTAGAGGTGCAGTCAAATGTTGTTTGGACCATAAGACTCTGAGGCTGTGTG---TGGTTGAAACTGTCTTGAGACTCAAAGAGC-TATTGAGGAAGGGATTTGATAGCTGAACTCTTTTGAAGATTTTCTCTGTCTCTCACACATCTGGGGCTGAATAGCTTAA-----CGTTTAATTTCTACATCGACGATAGTTTAATAGCCATTCATGCAAATCAGTTCTGCTGTGAG-TTATTATCCTACTCCAATACCAAGTAACACATTC s panTro4.chr3 77240248 970 + 202329955 TGCGTCTTCCCGCTTTGTAATCCAGAGTGCGATTTCTTCTTGCTGTCTGTCTCTCCATAAATAAGCGTTGGGCGGAGGACAAGCTGGTTACAATTGATGATGGAACGAGATTCTAGCAGAATTGCAAAATGAACTGAGAGCCACAAAAATGTGCCTCTGTGAACCAGCAGAGACAGCTGTGGAAGGCAAAGGAAGAGGAGCCAAaaggccagataacattcctgcttcctgtacattgtgggagtgaaattgtcagcaacctatgtcagtaattaacgagaggctttttagagagtaagacttctgatagacacctcaatagctgaagtcactcttcagtgctgcacacaacctgtggacagatttTCATCATTATTAATTCATTTATTCAAC----AGATATTAAATTCAAAGCATAGTTCTAAAC--TGCAGTCAATTACAAAAAGTAAATAATAATGAAGGGCATTAGCTCTGCCTCATAGGACGTT-AAAACTCTAGCTGCTAAATAAGACAAATAGG----GTTCCCACATCAAGTGCCTGCGCTCCTGTTATAACCTGGACTCTGCTTCCAGTGGCTTCTCTTGTTTCTCTTTTGGTAAGCCCATCATTTGGGTTAGTCCCTATCCTTGCCATGGT-CATCCACCAGTAGGTGGACCTCCTTGACCATAACTACAGGCATAGATCTTTGATTGTTT-CTTTTCAAATGTTTG-CTTACTTTAGAGCTGCAGTCAAATGTTGTTTGGACCATAAGACTCTGAGGCTGTGTG---TGGTTGAAACTGTCTTGAGACTCGAAGAGC-TATTGAGGAAAGGATTTGGT-GCCGAACTC--TTGAAATTTGTCTCTGTCTCTCACACATCTGGGGCTGAATAGCTGAATATATTGTTTAATTTCTACATCGATGATAGTTTAATAGGCATTCATGCAAATCAGTTCTGCTGGGAGTTTATTATCCTACTCCAATAACAAGTAATGCGTTC i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42410206 972 + 202140232 TGCGTCTTCCCACTTTGTAGTCCAGAGTGTGATTTCTTCTTGCTATCTGTCCCTCCATAAATAAGCGCTGGGTGGAGGACAAGCTGGTTACAGTTGAGGATGGAATGAGATTCTAGCAGAATTGCAAAATGAACTGAGAGCCACAAAAGTGTCCCTCTGTAAACCAGCAGAGAGAGCTGTGGAAGGCAAAGGAAGAGGAGCCAAGaggccagataacattcctgcttcccctacattgtgagagtgaaatcgtcagcaacctatatcagtaattaacgagaggctttttagagagtaagacttctgctagatacctcaatagctgaagtcgctcttcagtgctgcacataacctgtggacagattttcatcattattaATTCATTTATTCAACAGACAGATATTAAATTCAAGGCATAGTTCTAAACTATGCAGTCAATTACAAAAAATAAATAATAATGAAGGGCATTAGCTCTGCCACATAGGATGTT-AAAACTCTAGCTGCTAAATGAGACAAATAGG----GTTCCCACATCAAGTGCCTGCACTCCTGTTATAACCTCGACTCTGCTTCCAATGGCTTCTCTTGTTTCTGTTTTGGTAAACCCATCATTTGGCTTAGTCCCTATCCTTGCCATGGT-CATCTACCAGTGGGTGGACCTCCTTGATGGTAACTACAGGCATAGATCT----TTGTTT-CTTTTCAAATGTTTG-CTTACTTTAGAGCCGCAGTCAAA---TATTTGGACCATCAGACTCTGAGGCTGTGTG---TGGTTGAAACTGTCTTGAGACTCAAAGAGC-TATTGAGGAAGGGATTTGGTAGCCGAACTCTTTTGAAATTTTTCTGTGTCTCTCACACATCTGGGGCTGAATAGCTGAATATGTTGTTTAATTTCTACATCAATGATAGTTTAATAGGCATTCATGCAAATCAGTTCTGCTGGGAGTTTATTATCCTACTCCAATAACAAGTAATGCATTC i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 27735 976 - 34861 TGTGTCTTCCCACTTTGTATTCCAGAGTGCGATTTCTTCCTGCTATCTGTCCCTCCATAAATAAGC-TTGGGTGGAGAACAAGCTGGTTACAATCGAGGATGGAACGAGATTCTAGCAGAATTGCAGAATGAACTGAGAGCCACCAAAGTGTGCCTCTG--AACCAGCAGAGAGAGCTGTGGAAGGCAAAGGAAGAGGAGCCAAGaggccagataatattcctgcttcccctacattgtgagagtgaaattgtcagcaacctatgtcagtaattaaccagaggctttttagagagtaagaattctgatagacacttcaatagctgaagtcgctcttcagtactgcacgtaacctGCGGACAGATTTTCATCATTATTAATTCATTTATTCAACAGATAGATATTAAATTCAAGGCATAGTTCTAAACTATGCAGTCAATTACAAAAAATAAATAATAATGAAGGGCATTAGCTCTGCCTCATAGGACGTT-AAAGCTCTAGCTGCTAAATGAGACAAGTAGG----GTTCCCACATCAAGTGCCTGGGCTCCTGTTGTAACCTGGACTCTGCTTCCAATGGCTTCTCTTGTTTCCGTTTTGGTAAAGCCGTCATTTGGCTTAGTCCCTATCCTTGCCATGGT-CACCCACCAGCAGGTGGACCTCCTTGACCGTAACTACACGCATAGATCTTTGATTGTTT-CTTTTCAAATGTTTG-CTTACTTTAGAGCTGCAGTCGAATGTTGTTTGGACCATAAGACTCTGAGGCTGTGTG---TGGTTGAAGCTGTCTTGAGACTCAAAGAGC-TATTGAGGAAGGGATTTGGTAGCTGAACTCTTTTGAAGTTTTTCTCTGTCTCTCACACATCTGGGGCTGAATAGCTGAATATATTGTTTAATTTCTACATCGATAATAGTTTAATAGGCATTCATGCAAATAAGTTCTGCTGGGAGTTTATTGTCCTACTCCAATAACCAGTAATGCATTC i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 148645 957 + 192599291 TGCGTCTTCCCACTTTGTAATCCAGAGTGCGATTTCTTCTTGCTATCTGCCCCTCCATAAATAAGTGTTCAGCAGAGGACAAGCTGGTTACAGTTGAGGATGGAACGAGATTCTAGCAGAATTGCAAAATGAACTGAGAGCCACGAAGGTGTCCCTCTGTGAACCAGCAGAGATTGCTGTGGAAGGCAAAGGAAGAGGagtcgagaggccggatcacattcctgcttcccctacattgtgagagtgaaattgtcagcaacctgtatcaataattaaccagaggctttttagagagtaagacttctaatagctacctc-gtagctgaagtagctctttagtactgcacataacctgtg----GATTTTCATCATT----ATTCATTTATTCAACAGATAGATATTAAATTCAAGGCATAGTTCTAAACTATACTGTCAATTACAAAAAATAAATAATAATGAAGGGCATTAGTTCTGCCTCATAGGATGTT-AACACTCTAGCTGCTAAATGAGACAAATAGG----GTTCCCGCATCGTGTGCCTGGCCTCCTGTTATAACCTGGACTCTGCTTCCAGTGGCTTCTCTTGTTTCTGTTTTGGTAAACGCACCATTTGGTTTAGTCCCTATCATTGCCATGGT-CACCCACCTGTAGGTGGACCTCCTTGACTGTAGCTATGGGCATAGATCT----TTGTTT-CTTTTCAAATGTCTG-CTTACTTTAGAGCTGCAATCAAATGTTGTTTGGACCATAAGACTCTGAGGTTGTGTG---TGGTTGAAGCCGTCTTGAGACTCAAA---------GAGGAAAGGCTTTGGTAGCCGAACTCTTTTGAAATTTTTCTCTGTCTCTCACACATCT-GGGCTGAATAGCTGAATATATTGTTTAATTTCTACATTGATGATAGTTTAATAGGCATTCATGCAATTCAGTTCTGCTGGGAGTTTATTATCCTACTCCAATAACAAGTAATGCATTC i rheMac3.chr2 C 0 C 0 s macFas5.chr2 171076 957 - 192460366 TGCGTCTTCCCACTTTGTAATCCAGAGTGCGATTTCTTCTTGCTATCTGCCCCTCCATAAATAAGTGTTCAGCAGAGGACAAGCTGGTTACAGTTGAGGATGGAACGAGATTCTAGCAGAATTGCAAAATGAACTGAGAGCCACGAAGGTGTCCCTCTGTGAACCAGCAGAGATTGCTGTGGAAGGCAAAGGAAGAGGagtcgagaggccagatcacattcctgcttcccctacattgtgagagtgaaattgtcagcaacctgtatcaataattaaccagaggctttttcgagagtaagacttctaatagctacctc-gtagctgaagtagctctttagtactgcacataacctgtg----GATTTTCATCATT----ATTCATTTATTCAACAGATAGATATTAAATTCAAGGCATAGTTCTAAACTATACTGTCAATTACAAAAAATAAATAATAATGAAGGGCATTAGTTCTGCCTCATAGGATGTT-AACACTCTAGCTGCTAAATGAGACAAATAGG----GTTCCCGCATCGTGTGCCTGGCCTCCTGTTATAACCTGGACTCTGCTTCCAGTGGCTTCTCTTGTTTCTGTTTTGGTAAACGCACCATTTGGTTTAGTCCCTATCATTGCCATGGT-CACCCACCTGTAGGTGGACCTCCTTGACTGTAGCTATGGGCATAGATCT----TTGTTT-CTTTTCAAATGTCTG-CTTACTTTAGAGCTGCAATCAAATGTTGTTTGGACCATAAGACTCTGAGGTTGTGTG---TGGTTGAAGCTGTCTTGAGACTCAAA---------GAGGAAAGGATTTGGTAGCCGAACTCTTTTGAAATTTTTCTCTGTCTCTCACACATCT-GGGCTGAATAGCTGAATATATTGTTTAATTTCTACATTGATGATAGTTTAATAGGCATTCATGCAAATCAGTTCTGCTGGGAGTTTATCATCCTACTCCAGTAACAAGTAATGCATTC i macFas5.chr2 C 0 C 0 s papAnu2.chr2 117695 965 + 187378091 CACGTCTTCCCACTTTGTAATCCAGAGTGCAATTTCTTCTTGCTCTCTGCCCCTCCATAAATAAGTGTTCAGCAGAGGACAAGCTGGTTACAATTGAGGATGGAACGAGATTCTAGCAGAATTGCAAAATGAACTGAGAGCCACAAAGGTGTCCCTCTGTGAACCAGCAGAGATTGctgtggaaggcaaaggaagaggaGTCGAGAGGCCAGATCACATTCCTGCTTCCCCTACATTGTGAGAGTGAAATTGTCAGCAACCTGTATCAATAATTAACCAGAGGCTTTTTAGAGAGTAAGACTTCTAATAGCTACCTC-GTAGCTGAAGTAGCTCTTTAGTACTGCACATAACCTGTG----GATTTTcatcatt----attcatttattcaacagatagaTATTAAATTCAAGGCATAGTTCTAAACTATACTGtcaattacaaaaaataaataataatgaagggCATTAGTTCTGCCTCATAGGATGTT-AACACTCTAGCTGCTAAATGAGACAAATAGG----GTTCCCGCATCGTGTGCCTGGCCTCCTGTTATAACCTGGACTCTGCTTCCAGTAGCTTCTCTTGTTTCTGTTCTGGTAAACGCACCATTTGGTTTAGTCCCTATCATTGCCATGGT-CACCCACCTGTAGGTGGACCTCCTTGACTGTAGCTACAGGCAtagatct----ttgttt-cttttcaaatgtctG-CTTACTTTAGAGCTGCAATCAAATGTTGTTTGGACCATAAGACTCTGAGGCTGTGTG---TGGTTGAAGCTGTCTTGAGACTCAAAGAGC-TATTGAGGAAAGGATTTGGTAGCCGAactcttttgaaatttttctctgtctctcacacatcT-GGGCTGAATAGCtgaatatattgtttaatttctacattgATGATAGTTTAATAGACATTCATGCAAATCAGTTCTGCTGGGAGTTTATTATCCTACTCCAATAACAAGTAATGCATTC i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 66405 957 - 101219884 TGCGTCTTCCCACTTTGTAATCCAGAGTGCGCTTTCTTCTTGCTATCTGTCCCTCCATAAATAAGTGTTCAGAAGAGGACAAGCTGGTTACAGTTGAGGATGGAACGAGATTCTAGCAGAATTGCAAAATGGACTGAGAGCCACAAAGGTGTCCCTCTGTGAACCAGCAGAGATTGCTGTGGAAGGCAAAGGAAGAGGagtcaagaggccagatcacattcctgcttcccctacattgtgagagtgaaattgtcagcaacctgtatcaataattaaccagaggctttttagagagtaagactcctaatagatacctc-gtagctgaagtagctctttagtactgcacataacctgtg----GATTTTCATCATT----ATTCATTTATTCAACAGATAGATATTAAATTCAAGGCATAGTTCTAAACTATACTGTCAATTACAAAAAATAAATAATAATGAAGGGCATTAGTTCTGCTTCATAGGATGTT-AACACTCTAGCTGCTAAATGAGACAAATCGG----GTTCCTGCATCGTGTGCCTGGCCTCCTGTTATAACCTGGACTCTGCTTCCAGTGGCTTCTCTTGTTTCTGTTCTGGTAAACGCACCATTTGGTTTAGTCCCTATCATTGCCGTGGT-CACCCACCTGTAGGTGGACCTCCTTGACTGTAGCTACAGCCATAGATCT----TTGTTT-CTTTTCAAATGTCTG-CTTACTTTAGAGCTGCAATCAAATGTTGTTTGGACCATAAGACTCTGAGGCTGTGTG---TGGTTGAAGCTGTCTTGAGACTCAAA---------GAGGAAAGGATTTGGTAGCCGAACTCTTTTGAAATTTTTCTCTGTCTCTCACACATCT-GGGCTGAATAGCTGAATATATTGTTTAATTTCTACATTGATGATAGTTTAATAGGCATTCATGCAAATCAGTTCTGCTGGGAGTTTATTATCCTACTCCAATAACAAGCAATGCATTC i chlSab2.chr22 I 131 C 0 s canFam3.chr31 28795129 946 - 39895921 TGCTTCTTTCTTCTTAT--ATCTAGAGTGTGA---CTTCTTGCTGATTGTCCTTCTATGAGTGAATGTTGGGCAGAGGACAAGTTGCTTAGACTGGAGGATGAAAAGAGGTTCTAGCAGAAGTGCAAAATAAATTGAAAGTCACAAAATTGCCTATATGTGAACCAGGAGAGAGGGCTGTGGAAGGCAAAGGAAGAGAAGCCAAGAGGCCAAATAAcctcactgctttctctaccttgtgagagtgaaattgttagtgatacatatcaataattaattagaggctttttaaaaggtaagacttctaatagataccttaatagctgaagtctctcctcagtactacacatgacctgtggacagattttagtcatc----ATTAA-TTATTCAACAAACAG---CTAAGTTGAAGGAATAGTCTTAAACTATGCAGG-AATT----AAATCAAACAGAAATGAAGGGCACTCTCCCTGCCTCATAGGACATTAAAAAACCTAGCTGCTAAGTGAGAAAAATGAGGATAGATTCCATGTC-TATACCTGG-TTCCGGTTCT-ACTGAGACTCTGTTGAGATCAGTTTC-CTTGTTCTTGTTCTGG-----CTATCATTTGGCACACTCCGTACTTCTGTCAGAGTAAACCCACCTGTGGATGAAACTCTGTCACCCTAACTACCTATTTTGGTCTTTGATTATTTCCTTTTTTAATATTTGA-TTAC-TTATAACTGCAAGAAAATGTACTTTGAAACATGAGGCTCTGAGGCTCTGAGTAATGGATGCAACTGTCT--GGACTCAAAGACCTTTTTAGGGGAGGAACTTAGTGGCCAAAC----TTAAAAATTGTCTTTATTCTTCACACATCT-GGG-------GCTGAATTTGTTGTTTAATTTCTACATCAA-GTTATTCCAACATG-ATTCACGCACATCAGTTCTAGTGTGAGTTTAGTATCTTCTTCCGATAACAAGGAATCTACTC i canFam3.chr31 C 0 I 4 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=15687.000000 s hg38.chrUn_GL000218v1 159592 4 + 161147 CTTA s panTro4.chr3 77241218 4 + 202329955 CTTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42411178 4 + 202140232 CTTA i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 28711 4 - 34861 CTTG i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 149602 4 + 192599291 CTTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172033 4 - 192460366 CTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118660 4 + 187378091 CTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 67362 4 - 101219884 CTTA i chlSab2.chr22 C 0 C 0 s otoGar3.GL873528 20763249 4 + 38779656 CTTA i otoGar3.GL873528 N 0 N 0 s canFam3.chr31 28796079 4 - 39895921 CTTA i canFam3.chr31 I 4 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=264557.000000 s hg38.chrUn_GL000218v1 159596 90 + 161147 AATTTAGTGTATGTATAAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTGTAGGTTTTAGT s panTro4.chr3 77241222 90 + 202329955 AATTTAGTGTACATATGAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTGTAGGTTTTAGT i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42411182 90 + 202140232 AATTTAGTGTAGGTATAAATTCTACATGGAAAGTGAAGCTGTCTTTATGAATTGCTGTTATGGAATATACTAGATTGTGTAGGTTTTAGT i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 28715 90 - 34861 AATTCAGTGTAGGTATAAATTCTACATGGTAAGTGAAACTGTCTTTATGAATTGCTACTATAGAATATACTAGATTGTGTAGGTTTTAGT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 149606 90 + 192599291 AATTCAGTGTAGGTATAAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTGTAGGTTTTAGT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172037 90 - 192460366 AATTCAGTGTAGGTATAAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTGTAGGTTTTAGT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118664 90 + 187378091 AATTCAGTGTAGGTATAAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTATAGGTTTTAGT i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 67366 90 - 101219884 AGTTCAGTGTAGGTATAAATTCTACATGGTAAGTGAAGCTGTCTTTATGAATTGCTGCTATAGAATATACTAGATTGTGTAGGTTTTAGT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28796083 90 - 39895921 AACTCAATATAAATATAAATTCCTTATGATATGTAAAGCTATCTTTTTGAATTACTACTATAGAATATATTTTATTGTGTGGGTTTTAGG i canFam3.chr31 C 0 C 0 e tupBel1.scaffold_136731.1-86001 40859 16816 - 86001 I a score=4095.000000 s hg38.chrUn_GL000218v1 159686 1 + 161147 A s panTro4.chr3 77241312 1 + 202329955 A i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42411272 1 + 202140232 A i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 28805 1 - 34861 A i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 149696 1 + 192599291 A i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172127 1 - 192460366 A i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118754 1 + 187378091 A i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 67456 1 - 101219884 A i chlSab2.chr22 C 0 C 0 s tupBel1.scaffold_136731.1-86001 57675 1 - 86001 A i tupBel1.scaffold_136731.1-86001 I 16816 N 0 s canFam3.chr31 28796173 1 - 39895921 A i canFam3.chr31 C 0 C 0 a score=599989.000000 s hg38.chrUn_GL000218v1 159687 237 + 161147 CAATCCAGGTAATTATCAAGCCTTTGTAATATTTTCAGGAAAGTGATCCTTTCACTTCAGTTTATGGAACTTGAAAATTTTTTAGTTGCCACCGACTAGTTAGATCATAAACTTAATTCTATGTATCTGAATTTATTTTTCTATTTATAAATTTATCTGGATGCTTTCTCAAAGGTTTCTCAGTTTAAAAACCTATGGCTTTGTAAAATTAAAACAGAAGTAA-----TAGGAATTGTGTTA s panTro4.chr3 77241313 237 + 202329955 CAATCTAGGTAATTATCAAGCCTTTGTAATATTTTCAGGAAAGTGATCCTTTCACTTCAGTTTATGGAACTTGGAAATTTTTCAGTTGCCACCCACTAGTTAGATCATAAACTTAATTCTATATATCTGAATTTATTTTTCTATTTATAAATTTATCTGGATGCTTTCTCAAAGGTTTCCCAGATTAAAAACCTATGGCTTTGTAAAATTAAAAGAGAAGTAA-----TAAGAATTGTGTTA i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42411273 208 + 202140232 CAATCCAGGTAATTATCATGCC-TGGTAATATTTTCA----------------------------GGAACTTGGAAATTTTTCATTTGCCACCCACTAGTTAGATCATAAACTTAATTCTATGTATCTGAATTTATTTTTCTATTTATAAATTTATCTGGATGCTTTCTCAAAGGTTTCCCAGATTAAAAACCTATGGCTTTGTAAAATTAAAACAGAAGTAA-----TAAGAATtctgtta i ponAbe2.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 28806 229 - 34861 CAATCCAGGTAATTATCAAGCC-TTGTAAGATTTTCAGGAAAGTGATCCTTTCACTTCAGTTTATGGAACTTGGAAATTTTTCAGTTGCCACCCACTAGTTA-ATCATAAACTTAATTCTATGTATCTGAATTTATTTTTCTATTTATAAATGTATCTGGATGCTTTCTCAAAGG------AGATTAAAAACCTATGACTTTGAAAAATTAAAAGAGAAGTAA-----TTAGAATTGTGTTA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 149697 236 + 192599291 CAATCCAGGTAATTATCAAGCC-TTGTAACATTTTCAGGAAAGTGATCCTTTCACTTCAATTTGTGGGACTTGGAAATTTTTCAGTTGTCACCCACTAGTTAGATCATAAACTTAATTCTATGTATCTGAATTTATTTTTCTATTTATAAATTTATCTGGATACTTTCTCAAAGGTTTCTCAGATTAAAAACCTATGGCTTTGTAAAAGTAAAAGAGAAGTAA-----TAAGAATCGTGTTA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172128 236 - 192460366 CAATCCAGGTAATTATCAAGCC-TTGTAACATTTTCAGGAAAGTGATCCTTTCACTTCAATTTGTGGGACTTGGAAATTTTTCAGTTGTCACCCACTAGTTAGATCATAAACTTAATTCTATGTATCTGAATTTATTTTTCTATTTATAAATTTATCTGGATACTTTCTCAAAGGTTTCTCAGATTAAAAACCTATGGCTTTGTAAAAGTAAAAGAGAAGTAA-----TAAGAATCGTGTTA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118755 235 + 187378091 CAATCCAGGTAATTATCAAGCC-TTGTAACATTTTCAGGAAAGTGATCCTTTCACTTCAATTTGTGGGACTTGGAAATTTTTCAGTTGTCACCCACTAGTTAGATCATAAACTTAA-TCTATgtatctgaatttatttttctatttataaatttatctGGATACTTTCTCAAAGGTTTCTCAGACTAAAAACCTATGGCTTTGTAAAAGTAAAAGAGAAGTAA-----TAAGAATCGTGTTA i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 67457 236 - 101219884 CAATCCAGGTAATTATCAAGCC-TTGTAACATTTTCAGGAAAGTGATCCTTTCACTTCAATTTGTGGGACTTGGAAATTTTTCAGTTGTCACCCACTAGTTAGATCATAAACTTAATTCTATGTCTCTGAATTTATTTTTCTATTTATAAATTTATCTGGATACTTTCTCAAAGGTTTCTCAGATTAAAAACCTATGGCTTTGTAAAAGTAAAAGAGAAGTAA-----TAAGAATCATGTTA i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28796174 225 - 39895921 TAGTCAATATAATTTTCAAGCG-TTTAAAAATTTTCAGGGAAGTATTCCTTTTGTTTTAGTTTATAGGACTTTAAAACTTGTAAGTTACCACCTACTAATTAAATTACTAACTTAA---TACATCCCGACATTTATTTTTCTACTTATCAAATTATCTAGTTGTTTTCTCAAAGTTCT-------------TCTATGGCTTTTTGAGAATAAAAGAGAAGTAATGATTTAAGAATTGTTTTT i canFam3.chr31 C 0 C 0 a score=178205.000000 s hg38.chrUn_GL000218v1 159924 74 + 161147 AAAAACAGAATCAggccaagcctggtggcttatgcctctaatgccaacacttagggaggccaaggcgggaggat s panTro4.chr3 77241550 74 + 202329955 AAAAACAGAATCAggccaagcatggtggcttatgcctgtaatgccagcacttagggaggccgaggcagaaggat i panTro4.chr3 C 0 C 0 s ponAbe2.chr3 42411481 74 + 202140232 aaaaacagaatcaggccaagcatggtggcttatgcctgtaatgccagcccttagggaggccgaggcaggaggat i ponAbe2.chr3 C 0 N 0 s nomLeu3.chrUn_GL397991_1 29035 74 - 34861 AAAAACAGAATCAggccgagcatggtggcttatgcctgtaatgccagcactttgggaggctgaggtgggaggat i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 149933 74 + 192599291 AAAAACAGGATCAggccaagcatggtggcttatgcctgtaatgccagcactttgggaggccgaggcgggaggat i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172364 74 - 192460366 AAAAACAGGATCAggccaagcatggtggcttatgcctgtaatgccagcactttgggaggccgaggcgggaggat i macFas5.chr2 C 0 C 0 s papAnu2.chr2 118990 74 + 187378091 AAAAACAGGatcaggccaagcatggtggcttatgcctataatgccagcactttgggaggccgaggcgggaggat i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 67693 74 - 101219884 AAAAACAGGATCAggccaagcatggtggtttatgcctgtaatgccagcaatttgggaggctgaggcgggaggat i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796399 0 - 39895921 C a score=253914.000000 s hg38.chrUn_GL000218v1 159998 147 + 161147 aatttgaggtcaggagttcaagaccagcctggacaacatggcaaaaccccacatgtat-taaaaaa---atacacaaattagctgggcgtggtggtgaatgcctttagtcctagctactcaggaggctaaggcaggagaatagcttgaacc s panTro4.chr3 77241624 150 + 202329955 catttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccacctgtaa-taaaaaaaatatatacaaattagcggggcgtggtggtgaatgcctttagtcctagctactcaggaggctaaggcaggagaattgcttaaacc i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29109 147 - 34861 catttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccacctgtaa-taaaaaa---atacacaaattagctgggtgtgctggtgaatgcctttagtcctagctactcaggaggctaaggcaggagaatcgctcgaacc i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150007 148 + 192599291 catttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccacctctaatttaaaaa---atacacaaattagctgggcgtggtggtgaatgccttcagtcccagctactcagaaggctaaggcaggagaattacttgaacc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172438 148 - 192460366 catttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccacctctaatttaaaaa---atacacaaattagctgggcatggtggtgaatgcctttagtcccagctactcagaaggctaaggcaggagaattacttgaacc i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119064 147 + 187378091 catttgaggtcaggagttcgagaccagcctggccaacatggcaaaaccccacctctaattttaaaa---ataca-aaattagctgggcgtggtggtgaatgcctttagtcccagctactcagaaggctgaggcaggagaatcacttgaacc i papAnu2.chr2 C 0 M 50 s chlSab2.chr22 67767 148 - 101219884 catttgaggtcaggagtttgagaccagcctggccaacatggcaaaaccccacctctaatttaaaaa---atacacaaattagctgggcgtggtggtgaatgcctctagtcccagctactcagaaggctaaggcagaagaatcacttgaacc i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796399 0 - 39895921 C a score=32404.000000 s hg38.chrUn_GL000218v1 160145 24 + 161147 tgggaggctgaggttgcagtgagc s panTro4.chr3 77241774 24 + 202329955 cgggaggctgaggttgcagtgagc i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29256 24 - 34861 caggaggctgaggttgcagtgagt i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150155 24 + 192599291 tgggaggctgaggttgcagtgagc i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172586 24 - 192460366 tgggaggctgaggttgcagtgagc i macFas5.chr2 C 0 C 0 s chlSab2.chr22 67915 24 - 101219884 cgggaggctgaggttgcagtgagc i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796399 0 - 39895921 C e papAnu2.chr2 119211 50 + 187378091 M a score=99776.000000 s hg38.chrUn_GL000218v1 160169 77 + 161147 caagatagagccactgcattccagcctgggtgacagagtgagatcctgtctt-----aaaaaaaagg---------------aaaaaagaaaaagaa s panTro4.chr3 77241798 80 + 202329955 caagatagtgccactgcactccagcctgggtgacagagtgagatcctgtctt--taaaaaaaaaaga---------------aaaaaagaaaaggaa i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29280 82 - 34861 caagatagtgccactgcactccagcctgggtgacacagtgagatcctgtcttaaaaaaaaaaaaaag---------------aaaaaagaaaagaaa i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150179 95 + 192599291 caagacagcaccactgcactctggcctgggtgacggagtgagatcctgtctc--aaaaaaaccaaaaaaaaaaaaaaaCAACAACAAAAAAAAGAAA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172610 93 - 192460366 caagacagtgccactgcactctggcctgggtgacggagtgagatcctgtctc--aaaaaaaacaaaaaacaacaacaaca--aaaaAAGAAAAGAAA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119263 74 + 187378091 taagacagcgccactgcactctggcctgggtgacggagtgagatcctgtctc--aaaaaaa---------------------aaaaaaagaaacaaa i papAnu2.chr2 M 50 C 0 s chlSab2.chr22 67939 77 - 101219884 cgagattgtgccactgcactccag-ctgggcaaaagagtgagactctgtctc--aaagaaaaaaa-----------------aaaaaaaaaaagaaa i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796399 0 - 39895921 C a score=202310.000000 s hg38.chrUn_GL000218v1 160246 105 + 161147 aaaaa-------CAGAATCATACAATGAGAGAGATTGTATAGCCCTTTTAATTGTCCATAATGGATACATTTCTTTTTCTGTGTAATAGTTTATCAGCATGAAAATTTTCTT s panTro4.chr3 77241878 112 + 202329955 aaGAAAGAAAACCAGAATCACACAATGAGAGAGGTTGTATAGCCCTTTTAATTGTCCATAATGTATACATTTCTTTTTCTGTGTAATAGTTTATCAGCATGAAAATTTTCTT i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29362 105 - 34861 AAGAAAGAAAACCAGAATCATACAATGAGAGAGGTTGTATAGCCCTTTTAATTGTCCATAATGGATACATTTCTTTTTCTGTGTAATAGTTTATCAGCATGAAAA------- i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150274 105 + 192599291 ACGAAAGAAAACCAGAATCAAACAATGAGAGAGGTTGTGTAGCCCTTTTAATTGTCCATAATGGATCCATTTCTTTTTCTATATAATAGTTCATCAGCATGGAAA------- i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172703 105 - 192460366 ACGAAAGAAAACCAGAATCAAACAATGAGAGAGGTTGTGTAGCCCTTTTAATTGTCCATAATGGATCCATTTCTTTTTCTATGTAATAGTTTATCAGCATGGAAA------- i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119337 105 + 187378091 acaaaagaaagccagAATCAAACAATGAGAGAGGTTGTGTAGCCCTTTTAATTGTCCATAATGgatccatttctttttctatgtaaTAGTTTATCAGCATGAAAA------- i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 68016 105 - 101219884 aTGAAAGAAAACCAGAATCAAACAATGAGAGAGGTTGTGTAGTCCTTTTAATTGTCCATAATGGATCCATTTCTTTTTCTATGTAATAGTTTATCAGCATGAAAA------- i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28796399 103 - 39895921 -------AAAACCAAAATTTTATAAT--AAGAAGTTATATATTCTTTTCAGGTGTCCAGAATGGACACACTTCTTTTTCTGTGTAATAGTTTGTCATTAAAAATAGTTTTTC i canFam3.chr31 C 0 I 5 a score=539516.000000 s hg38.chrUn_GL000218v1 160351 345 + 161147 TTTCTGTGTAATAGTTTATCAGCATGAAAAAAAAGAGTCACTGAACACTGATAATTTTCtt-tctctctctc--tcttttttcctttttttggagatgaagtctcgctctgttgccca-ggctggagtgcaatggcaacatctctgttcactgcaaccttcacatcctgggttcaggcgattttcctgcctcagcctcccaagtagctgggattccaggtgcaccccgtcatgcctggataaatttttgtattttcagtagagacggggtttcatcatgttggccaggctggtctcaaactcctgacctcaaataatctgcccgccttagcctcccaaattactggTGA s panTro4.chr3 77241990 344 + 202329955 TTTCTGTGTAATAGTTTATCAGCATGAAAAAAAAGAGTCACTGAACACTGATAATTTTCtt-tctctctct---ttttttttccttttgttggagatgaagtctcgctctgttgccca-ggctggagtgcaatggcaacatctctgttcactgtaaccttcacatcctgggttcaggcgattctcctgcctcagcctcccaagtagctgggattacaggtgcatcccaccatgcctggataagtttttctattttcagtagagatggggtttcatcatgttggccaggctggtctcaaactcccgacctcaaatgatctgcccgccttagcctcccaaagtgctggTAA i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29467 321 - 34861 --------------------------AAAAAAAAGAGTCACCGAACACTGATAATTTTCTTCTCTCTCTCtt--ttttttttccttttttttgagatgaagtcttgctctgttgcccagggctggagtgcaatggcaacatctctgttcactgcgaccttcacatcctgggttcaggcgattctcctgcctcaacctcccaagtagctggggttacaggtgcatcccaccatgcctggataagtttttgtattttcagtagagatggggtttcatcgtgttggctaggctggtctcaaactcctgacctccaatgatctgcccgtcgtagcctcccaaagtgctggTGA i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150379 315 + 192599291 --------------------------------AAGAGTCACTGAACACTGATAATTTTCTT-TCTCTCTCTCttttttttttccttttttttgagatgaagtctcgctctgttgccca-ggctggagtgcaagggcaacatctctgttcactgcaacctccacatcctgggttcacgtgattctcctgcctcagcctccccagtggcagggattccaggtgtatcccaccatgcctggataagtttttgtatttttagtagagatgtggtttcatcatgttggccaggctgatcttgatctcctgagctcaaatgatctgcccgcctcagcctcccaaagtgttggTGA i rheMac3.chr2 C 0 C 0 s macFas5.chr2 172808 315 - 192460366 --------------------------------AAGAGTCACTGAACACTGATAATTTTCTT-TCTCTCTCTCttttttttttccttttttttgagatgaagtctcgctctgttgccca-ggctggagtgcaagggcaacatctctgttcactgcaacctccacatcctgggttcaggtgattctcctgcctcagcctccccagtggcagggattacaggtgtatcccaccatgcctggataagtttttgtatttttagtagagatgtggtttcatcatgttggccaggctgatcttgatctcctgagctcaaatgatctgcccgcctcagcctcccaaagtgttggTGA i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119442 314 + 187378091 --------------------------------AAGAGTGACTGAACacagataattttctt-tctctctctc-tttttttttccttttttttgagatgaagtctcgctctgttgccca-ggctggagtgcaagggcaacatctctgttcactgcaacctccacatcctgggttcaggtgattctcctgcctcagcctccccagtggcggggattacaggtgtatcccaccatgcctggataagtttttatatttttagtagagatggagtttcatcatgttggccaggctgatcttgatctcctgagctcaaatgatctgcccgcctcagcctcccaaagtgttggtga i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 68121 313 - 101219884 --------------------------------AAGAGTCACTGAACACTGATAATTTTCtt-tctctctctc--ttttttttccttttttttgagatgaagtctcgctctgttgccca-ggctggagtgcaagggcaacatctgtgttcactgcaacctccatatcctgggttcaggtgattctcctgcctcagcctccccagtggcagggattacaggtgtatcccaccatgcctggataagtttttgtatttttagtagagatggggtctcatcatgttggccaggctgatctcgatctcctgagctcaaatgatctgcctgcctcagcctcccaaagtgttggTGA i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796502 5 - 39895921 I a score=594457.000000 s hg38.chrUn_GL000218v1 160696 277 + 161147 TGATTTTCATTTAATGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACAAG---TCACCTATAGTTTACCAGAAAGTAGTATCAGTCACCAGCGTTGAAGCATACTCCTAACCCTGGAAAATTTCTTCAGCAGCCAGAATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATTCAGATTAGTAAATCTCCATGGTGTTCGAACTGTATAATATCAAATCTAAAATAAGTCAAGAGAGTTGGACAATATCTCATCTCT s panTro4.chr3 77242334 277 + 202329955 TGATTTTCATTTAATGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCCTCTATAGTTTACCAGAAAGTAGTACCGGTCACCAGTGTTGAAACGTACTCCTAACCCTGGAAAATTTATTCAGCTGCCAGAATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATTCAGATAAGTAAATCTCCCTGGTGTTTGAACTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTCGGACAATTTCTCATCTCT i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 29788 277 - 34861 TGATTTTCATTTAACGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCATCTATAGTTTACCAGAAAGTAGTACTGGTCACCAGCATTGAAGCATACTCCTAACGCTGGAAAATTTCTTCAGCTGCCAGAATTAATCTCAGATTTTAAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATTTAGATTAGTAAATCTCCATGGTGTTCGAGCTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTTGAAGGATTTCTCATCTCT i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150694 277 + 192599291 TGATTTTCATTTAATGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCATATATAGTTTACCAGAAAGTAGTACTGGTCACCAGCGTAGAAGCATACTCCTAACCCTGGAAAATTTCTTCAGCTCCCAGGATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATCCAGATTAGTAAATCTCCATGGTGTTCGAACTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTTGGACAATTTTTCGTCTCT i rheMac3.chr2 C 0 C 0 s macFas5.chr2 173123 277 - 192460366 TGATTTTCATTTAATGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCATATATAGTTTACCAGAAAGTAGTACTGGTCACCAGCGTAGAAGCATACTCCTAACCCTGGAAAATTTCTTCAGCTCCCAGGATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATCCAGATTAGTAAATCTCCATGGTGTTCGAACTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTTGGACAATTTTTCATCTCT i macFas5.chr2 C 0 C 0 s papAnu2.chr2 119756 277 + 187378091 tgatttttatttaatggtGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCATACGTAGTTTACCAGAAAGTAGTACTGGTCACCAGCGTAGAAGCATACTCCTAACCCTGGAAAATTTCTTCAGCTCCCAGGATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATCCAGATTAGTAAATCTCCATGGTGTTCGAACTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTTGGACAATTTTTCgtctct i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 68434 277 - 101219884 TGATTTTCATTTAATGGTGTTCTACAAAGTGAGTTTAGGCAGTGAAAGGGCACATG---TCATATATAGTTTACCAGAAAGTAGTACTGGTCACCAGCGTAGAAGCATACTCCTAACCCTGGAAAATTTCTTCAGCTCCCAGGATTAATCTCAGATTTTGAGACTGGAGCAAAGACTAATTTGGTATGTGTTCATCCAGATTAGTAAATCTCCATGGTGTTCGAACTGTATAATATCAAATCTAAAATAAGCCAAGAGAGTTGGACAATTTTTCATCTCT i chlSab2.chr22 C 0 C 0 s canFam3.chr31 28796507 278 - 39895921 TGATTTTCATTTAACAGTGGTTTAGAAAGTGAGTTTAGGTGACAAACAGGTATATGCCATCATCTGTAGTTTATTAGAAACTGACAATCATCA--AACTTGAATGTATATCCCTAACCATGTAACAATTCTCCAGCTGCCAGGAGTTATCCCAAATTTTGAGATTGGAACAAAGGCTAATTTGGTATATTTTCATCCATAATAATAAAGTAATTTGGCATTTCAATTGTAAAAAATAAAATCTCGAATAGTCTAAGAGAATTGGATAATTTCTGCTCTCT i canFam3.chr31 I 5 I 237 a score=750.000000 s hg38.chrUn_GL000218v1 160973 1 + 161147 G s panTro4.chr3 77242611 1 + 202329955 C i panTro4.chr3 C 0 C 0 s nomLeu3.chrUn_GL397991_1 30065 1 - 34861 C i nomLeu3.chrUn_GL397991_1 C 0 C 0 s rheMac3.chr2 150971 1 + 192599291 C i rheMac3.chr2 C 0 C 0 s macFas5.chr2 173400 1 - 192460366 C i macFas5.chr2 C 0 C 0 s papAnu2.chr2 120033 1 + 187378091 c i papAnu2.chr2 C 0 C 0 s chlSab2.chr22 68711 1 - 101219884 C i chlSab2.chr22 C 0 C 0 e canFam3.chr31 28796785 237 - 39895921 I a score=339646.000000 s hg38.chrUn_GL000218v1 160974 173 + 161147 AG-AAAAAAATGCATTATTTTCAAGAGATTTAAGACTGAAT-----------TTAAAATC-CAA----------------CTGCCTATTCCAGTGTATGTTTCTCTAGAATAAGGCCAAGCCCTACAAATTCTGGATAGTGTCCTCCAAGTTGTG-TTTAAGTGATAATTGATAAATCTATGGTTTAGATACATATGGAATTC s panTro4.chr3 77242612 172 + 202329955 AG---AAAATTGCATCATTTTTAAGAGATTTAAGATTGAAT-----------TTAAAATC-CAA----------------GTGCCTATTCCAGTGTATGTTTCTCCAGAATAAGGCCAAGCCCTACAAATTCCGGATAGTGTCCTCCAAGTTGTGTTTTAGGTGATAATTGATAAATCTATAGTTTAGGTACATATGGGATTC i panTro4.chr3 C 0 N 0 s nomLeu3.chrUn_GL397991_1 30066 172 - 34861 AGAAAAAAAATGCATCATTTTCAAGAGATTTAAGATTGAAT-----------TTAAAATC-CAA-----------------TGCCTATTCCAGTGTATGTTTCTCCAGAATAAGGCCAAGCCCTA-AAATTCTGGAGAGTGTCCTCCAAGTTGTG-TTTAAGTAATAATTGATAAATCTATGGTTTAGATACGTATGGAATTC i nomLeu3.chrUn_GL397991_1 C 0 N 0 s rheMac3.chr2 150972 173 + 192599291 AG-AAAAAAATGCATCATTTTCAAGAGATTTAAGATTGAAT-----------TTAAAATC-CAA----------------CTGCCTATTCCAGTGGATGTTTCTCCAGAATAAGGCCAAGCCCCACAAATTCTGGATAGTGTCCTCCAAGTTGTG-TTTAAGTGATAATTGACAGATCTATGGTTTAGATACATATGGAATTC i rheMac3.chr2 C 0 N 0 s macFas5.chr2 173401 173 - 192460366 AG-AAAAAAATGCATCATTTTCAAGAGATTTAAGATTGAAT-----------TTAAAATC-CAA----------------CTGCCTATTCCAGTGGATGTTTCTCCAGAATAAGGCCAAGCCCCACAAATTCTGGATAGTGTCCTCCAAGTTGTG-TTTAAGTGATAATTGACAGATCTATGGTTTAGATACATATGGAATTC i macFas5.chr2 C 0 N 0 s papAnu2.chr2 120034 174 + 187378091 ag-aaaaaaatgcatcattTTCAAGAGATTTAAGATTCAAT-----------TTAAAATCTCAA----------------CTGCCTATTCCAGTGGATGTTTCTCCAGAATAAGGCCAAACCCCACAAATTCTGGATAGTATCCTCCAAGTTGTG-TTTAAGTGATAATTGACAGATCTATGGTTTAGATACATATGGAATTC i papAnu2.chr2 C 0 N 0 s chlSab2.chr22 68712 174 - 101219884 AGAAAAAAAATGCATCATTTTCAAGAGATTTCAGATTGAAT-----------TTAAAATC-CAA----------------CTGCCTATTCCAGTGGATGTTTCTCCAGAATAAGGCCAAGCCCCACAAATTCTGGATAGTGTCCTCCAAGTTGTG-TTTAAGTGATAATTGACAAATCTATGGTTTAGATACATATGGAATTC i chlSab2.chr22 C 0 N 0 s canFam3.chr31 28797022 198 - 39895921 aa-aagaaTGTGTATCATTTTCAAGATATTTAAGAGTAAACTGCCTTAAATGTCAAAATCATAACAGTCTCCAGAGGGGCCTGCTTATCTTAGTGGAAGCTTCTATAG---AAGGCCAAACTTTTCAACCTCTAGATAGTATAATCTAAGTCAGC-TTTAAGTAAGAATTGGTGAATCTCTGGTTTTAATACCCATGAGATTC i canFam3.chr31 I 237 N 0